Query 030061
Match_columns 183
No_of_seqs 107 out of 1083
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 12:33:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030061.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030061hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1olm_A SEC14-like protein 2; l 97.0 0.011 3.6E-07 49.8 12.2 90 36-134 281-385 (403)
2 2p9r_A Alpha-2-M, alpha-2-macr 92.6 1.5 5.1E-05 29.1 10.3 65 52-116 14-86 (102)
3 2dj4_A Filamin-B; beta-sandwic 92.4 0.88 3E-05 30.8 8.1 86 39-126 9-99 (108)
4 2d7n_A Filamin-C; beta-sandwic 91.8 1.5 5.1E-05 29.1 8.5 54 74-127 23-79 (93)
5 4dzg_A PLIG; lysozyme inhibito 91.4 0.23 7.9E-06 34.5 4.2 70 38-115 23-95 (114)
6 2d7m_A Filamin-C; beta-sandwic 90.7 1.8 6.3E-05 29.5 8.4 66 60-127 33-101 (115)
7 2ee9_A Filamin-B; beta-sandwic 90.3 0.8 2.7E-05 30.7 5.9 53 74-126 31-86 (95)
8 2dmb_A Filamin-B; beta-sandwic 90.3 2.7 9.3E-05 29.2 9.0 55 74-128 44-101 (124)
9 3rgh_A Filamin-A; cell adhesio 90.1 2.9 0.0001 27.8 9.2 54 74-127 40-96 (100)
10 3cnk_A Filamin-A; FLNA24, X-RA 89.6 2.7 9.4E-05 27.1 8.2 44 74-117 31-77 (89)
11 2ee6_A Filamin-B; beta-sandwic 89.3 2.9 9.8E-05 28.0 8.3 53 74-127 43-97 (105)
12 2d7p_A Filamin-C; beta-sandwic 88.3 3.9 0.00013 27.9 8.5 53 74-126 42-97 (112)
13 3osv_A Flagellar basal-BODY RO 87.2 3.2 0.00011 29.4 7.8 56 55-115 24-90 (138)
14 2e9j_A Filamin-B; beta-sandwic 86.7 3 0.0001 28.6 7.2 84 40-127 20-111 (119)
15 2nqc_A Filamin-C; immunoglobul 86.5 6.9 0.00024 27.8 10.6 53 74-127 77-131 (138)
16 3d33_A Domain of unknown funct 86.4 3.1 0.0001 28.5 6.9 55 54-115 37-96 (108)
17 1v05_A Filamin C; actin-bindin 86.3 3.3 0.00011 27.1 7.0 44 74-117 38-84 (96)
18 2dia_A Filamin-B; beta-sandwic 86.1 4.6 0.00016 27.3 7.9 55 74-128 43-100 (113)
19 2dlg_A Filamin-B; beta-sandwic 85.2 2.1 7.3E-05 28.8 5.6 53 74-126 32-87 (102)
20 3c12_A FLGD, flagellar protein 84.8 5.5 0.00019 28.1 8.0 54 56-115 28-92 (138)
21 2w0p_A Filamin-A; alternative 83.9 6.9 0.00024 25.5 8.5 53 74-127 35-89 (94)
22 2k7p_A Filamin-A; IG-like, ABP 82.3 12 0.00042 27.6 9.4 53 74-127 129-183 (188)
23 4b7l_A Filamin-B; structural p 81.4 6 0.00021 32.5 8.0 95 30-126 243-345 (347)
24 2dmc_A Filamin-B; beta-sandwic 80.8 3.7 0.00013 28.2 5.5 53 74-126 46-101 (116)
25 4g9s_B Inhibitor of G-type lys 80.3 4.5 0.00015 27.5 5.8 74 33-115 16-92 (111)
26 3isy_A Bsupi, intracellular pr 79.6 13 0.00044 25.8 8.1 37 53-90 16-59 (120)
27 3irp_X URO-adherence factor A; 79.5 2.6 8.8E-05 35.8 5.2 43 73-115 330-372 (429)
28 2dic_A Filamin-B; beta-sandwic 79.1 12 0.0004 24.9 8.8 52 74-126 43-96 (105)
29 2bp3_A Filamin A; structural p 78.4 11 0.00039 24.5 9.2 54 74-128 38-93 (97)
30 2eec_A Filamin-B; beta-sandwic 78.0 14 0.00049 25.5 9.3 66 60-128 41-108 (125)
31 4fxk_A Complement C4 beta chai 77.6 26 0.0009 30.5 11.4 63 53-116 133-202 (656)
32 2dib_A Filamin-B; beta-sandwic 75.8 6.1 0.00021 27.3 5.5 55 74-128 58-115 (128)
33 2k7q_A Filamin-A; IG-like, ABP 74.6 13 0.00044 27.5 7.4 53 74-127 129-183 (191)
34 2eea_A Filamin-B; beta-sandwic 73.9 18 0.0006 24.4 9.8 54 74-128 53-108 (115)
35 1wlh_A Gelation factor; ABP-12 73.0 27 0.00091 27.6 9.4 52 74-126 235-289 (311)
36 2k9u_A Gamma filamin; cytoskel 72.0 20 0.00069 24.3 10.1 53 74-127 50-104 (119)
37 3c75_A Amicyanin; copper prote 70.6 13 0.00045 25.8 6.3 19 94-112 101-120 (132)
38 1qfh_A Protein (gelation facto 68.9 33 0.0011 25.5 11.0 43 74-117 136-181 (212)
39 2ds4_A Tripartite motif protei 68.8 22 0.00075 23.4 9.9 54 74-127 50-108 (113)
40 2k7p_A Filamin-A; IG-like, ABP 68.5 14 0.00048 27.3 6.4 44 74-117 35-81 (188)
41 3sd2_A Putative member of DUF3 68.2 19 0.00064 24.3 6.2 69 37-116 20-91 (101)
42 2d7o_A Filamin-C; beta-sandwic 67.7 21 0.0007 24.0 6.6 54 74-128 43-98 (111)
43 2di9_A Filamin-B; beta-sandwic 66.1 30 0.001 23.9 10.2 54 74-128 63-118 (131)
44 3jqw_A COLH protein, collagena 64.5 32 0.0011 23.7 10.2 70 41-116 35-105 (121)
45 2di8_A Filamin-B; beta-sandwic 64.0 30 0.001 23.2 9.0 54 74-128 43-98 (111)
46 4hci_A Cupredoxin 1; structura 63.7 9.3 0.00032 24.9 4.1 17 95-111 68-85 (100)
47 2hr0_A Complement C3 beta chai 62.8 74 0.0025 27.8 10.9 62 53-115 119-189 (645)
48 3hrz_A Cobra venom factor; ser 58.2 43 0.0015 29.6 8.5 61 54-115 118-182 (627)
49 2k7q_A Filamin-A; IG-like, ABP 57.7 28 0.00097 25.5 6.3 44 74-117 32-78 (191)
50 2j3s_A Filamin-A; cytoskeleton 55.6 62 0.0021 25.3 8.4 53 74-127 229-283 (288)
51 3cu7_A Complement C5; Mg domai 51.2 39 0.0013 33.4 7.6 62 54-116 138-207 (1676)
52 3gf8_A Putative polysaccharide 51.0 16 0.00056 29.1 4.2 70 46-115 4-85 (296)
53 2x5p_A FBA2, fibronectin bindi 48.8 25 0.00085 24.3 4.4 55 73-130 43-97 (121)
54 2xwx_A GBPA, glcnac-binding pr 48.7 1.1E+02 0.0038 25.5 9.0 61 53-117 309-375 (391)
55 4ank_A Transthyretin; hormone 48.2 34 0.0012 24.5 5.1 57 59-116 32-97 (147)
56 3pay_A Putative adhesin; struc 48.1 16 0.00054 29.5 3.7 67 47-113 6-82 (314)
57 3tu6_A Pseudoazurin (blue copp 47.2 56 0.0019 22.5 6.1 19 94-112 62-81 (127)
58 3arc_L Photosystem II reaction 44.7 17 0.00058 19.6 2.2 22 6-27 10-31 (37)
59 3erx_A Pseudoazurin; copper pr 44.2 53 0.0018 22.5 5.5 19 94-112 60-79 (123)
60 1kd8_B GABH BLL, GCN4 acid bas 44.1 37 0.0013 18.2 4.4 28 147-174 2-29 (36)
61 1uo4_A General control protein 42.2 39 0.0013 17.9 4.2 27 148-174 3-29 (34)
62 2b39_A C3; thioester, immune d 42.1 1.4E+02 0.0046 29.6 9.8 61 54-115 141-210 (1661)
63 1qfh_A Protein (gelation facto 41.6 45 0.0015 24.7 5.2 44 74-117 45-91 (212)
64 3c3f_A Alpha/beta peptide with 40.9 41 0.0014 17.8 4.4 27 147-173 2-28 (34)
65 4acq_A Alpha-2-macroglobulin; 40.6 2.3E+02 0.0079 27.7 11.1 61 54-115 118-187 (1451)
66 1dip_A Delta-sleep-inducing pe 39.1 62 0.0021 20.4 4.6 34 142-175 11-44 (78)
67 1wlh_A Gelation factor; ABP-12 38.5 70 0.0024 25.1 6.2 44 74-117 144-190 (311)
68 2k8e_A UPF0339 protein YEGP; p 37.7 88 0.003 21.8 5.8 62 51-116 11-90 (130)
69 3prx_B Cobra venom factor; imm 37.5 1.4E+02 0.0049 29.6 9.1 42 74-115 160-204 (1642)
70 2r5o_A Putative ATP binding co 37.2 73 0.0025 23.1 5.7 40 51-91 66-105 (188)
71 3fn2_A Putative sensor histidi 37.0 37 0.0013 22.9 3.5 39 75-113 50-91 (106)
72 3afg_A Subtilisin-like serine 36.6 2E+02 0.007 24.6 12.9 43 74-116 460-504 (539)
73 2r2v_A GCN4 leucine zipper; co 36.3 50 0.0017 17.5 4.4 27 147-173 2-28 (34)
74 2q0z_X Protein Pro2281; SEC63, 35.8 1.6E+02 0.0056 23.4 8.1 96 31-133 218-330 (339)
75 2akf_A Coronin-1A; coiled coil 35.5 47 0.0016 17.0 4.1 21 150-170 3-23 (32)
76 3idu_A Uncharacterized protein 35.0 1.1E+02 0.0038 21.1 6.8 66 50-117 28-99 (127)
77 1jcd_A Major outer membrane li 34.2 57 0.002 19.1 3.7 25 148-172 6-30 (52)
78 2bni_A General control protein 32.9 58 0.002 17.2 4.2 27 147-173 2-28 (34)
79 1kd8_A GABH AIV, GCN4 acid bas 32.8 60 0.0021 17.4 4.3 27 147-173 2-28 (36)
80 2dgc_A Protein (GCN4); basic d 31.9 58 0.002 19.6 3.6 31 144-174 28-58 (63)
81 2cal_A Rusticyanin; iron respi 31.5 62 0.0021 22.9 4.3 18 95-113 121-139 (154)
82 1gd2_E Transcription factor PA 30.8 28 0.00095 21.7 2.0 34 143-176 26-59 (70)
83 1fft_B Ubiquinol oxidase; elec 30.1 1.8E+02 0.0061 23.4 7.3 72 33-113 125-209 (315)
84 2wq1_A General control protein 29.7 66 0.0023 16.9 4.4 26 148-173 2-27 (33)
85 3m86_A Amoebiasin-2; cysteine 28.1 1.3E+02 0.0046 19.9 6.0 37 96-132 72-110 (111)
86 2pnv_A Small conductance calci 27.8 85 0.0029 17.5 3.6 22 148-169 18-39 (43)
87 3m48_A General control protein 27.3 75 0.0026 16.7 4.2 26 148-173 2-27 (33)
88 1dh3_A Transcription factor CR 27.2 75 0.0026 18.6 3.4 31 143-173 19-49 (55)
89 1jdm_A Sarcolipin; helix, memb 26.8 54 0.0019 16.7 2.3 16 8-23 10-25 (31)
90 2er8_A Regulatory protein Leu3 26.5 18 0.0006 22.0 0.5 24 145-168 48-71 (72)
91 3im1_A Protein SNU246, PRE-mRN 26.0 1.9E+02 0.0064 22.9 6.8 95 31-132 214-327 (328)
92 3ay2_A Lipid modified azurin p 25.9 1.1E+02 0.0037 22.2 4.8 19 95-113 131-152 (167)
93 1paz_A Pseudoazurin precursor; 25.6 1.6E+02 0.0054 19.9 6.2 18 95-112 61-79 (123)
94 1gu3_A Endoglucanase C; carboh 25.5 60 0.002 23.0 3.3 47 33-83 30-82 (149)
95 2pn5_A TEP1R, thioester-contai 23.3 4.9E+02 0.017 24.8 14.4 63 53-115 113-184 (1325)
96 2j3s_A Filamin-A; cytoskeleton 23.1 2.6E+02 0.0089 21.5 9.6 42 74-116 38-81 (288)
97 3nmd_A CGMP dependent protein 23.0 1.5E+02 0.005 18.6 4.4 36 146-181 33-68 (72)
98 2c34_A ICP, inhibitor of cyste 22.5 1.6E+02 0.0054 19.8 4.9 38 95-132 76-115 (116)
99 3hfe_A Potassium voltage-gated 22.4 92 0.0031 16.1 2.8 18 148-165 12-29 (31)
100 2oxj_A Hybrid alpha/beta pepti 22.3 97 0.0033 16.3 4.4 27 147-173 2-28 (34)
101 2cua_A Protein (CUA); CUA cent 22.1 2E+02 0.0067 19.8 5.5 17 96-112 100-117 (135)
102 3c3g_A Alpha/beta peptide with 22.0 98 0.0033 16.2 4.4 26 148-173 2-27 (33)
103 1pmy_A Pseudoazurin; electron 21.9 1.9E+02 0.0064 19.5 5.7 18 95-112 61-79 (123)
104 2jp3_A FXYD domain-containing 21.8 56 0.0019 20.1 2.1 21 10-30 18-38 (67)
105 2wgn_B Inhibitor of cysteine p 21.4 1.9E+02 0.0064 20.0 5.2 36 97-132 94-131 (132)
106 2h7w_A Chagasin; beta-strands, 20.9 2.1E+02 0.0073 19.7 6.0 37 96-132 92-130 (131)
107 1txp_A HnRNP C, heterogeneous 20.2 98 0.0034 15.5 3.0 22 157-178 3-24 (28)
108 2wy3_B UL16, uncharacterized p 20.2 1.2E+02 0.0042 20.9 3.8 33 44-81 36-68 (158)
109 2zxe_G FXYD10, phospholemman-l 20.1 72 0.0025 20.0 2.4 21 10-30 20-40 (74)
No 1
>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E*
Probab=96.97 E-value=0.011 Score=49.81 Aligned_cols=90 Identities=16% Similarity=0.104 Sum_probs=63.6
Q ss_pred EEEEcCCCcceeeeEcC-CCcEEEEEEEEeeCCCCCCCCeeEEEEECC-----C---C--CeEEeeecc----ceeeEEE
Q 030061 36 WLQIPSSGTKCVSEEIN-SNVVVLADYYVIDEAHPEHPPTVSAKVTSP-----Y---G--NNLHHNENV----THGQFAF 100 (183)
Q Consensus 36 ~f~I~~g~~~Cf~e~v~-~~~~v~~~y~v~~~~~~~~~~~v~~~V~dp-----~---g--~~v~~~~~~----~~g~f~f 100 (183)
++.|.+|+...+--.+. +|..+...|.+. ++ +|.|.|+=. + | ..+...... .--.-+|
T Consensus 281 ~~~V~~g~~~~v~~~v~~~g~~l~W~f~~~-~~------DI~F~v~~~~~~~~~~~~~~~~~v~p~~r~~~~~~~~~G~~ 353 (403)
T 1olm_A 281 SVQISRGSSHQVEYEILFPGCVLRWQFMSD-GA------DVGFGIFLKTKMGERQRAGEMTEVLPNQRYNSHLVPEDGTL 353 (403)
T ss_dssp EEEECTTCEEEEEEEECSTTCEEEEEEEES-SS------CEEEEEEEC----CCCCGGGSEEEEEEEEECTTTSCEEEEE
T ss_pred EEEEcCCCEEEEEEEEcCCCCEEEEEEEec-CC------cEEEEEEEecccccccCCCcceEEeeeeeecCccccccCEE
Confidence 48899999999998887 689999999995 32 777777611 1 2 123322111 1124457
Q ss_pred EeccCcceEEEEEeCCCCCCCccEEEEEEEEEcc
Q 030061 101 TTTEAGNYMACFWLGSNPQKVADATLGLDWRIGF 134 (183)
Q Consensus 101 ~a~~~G~Y~~Cf~n~~~~~~~~~~~V~f~i~~g~ 134 (183)
.+..+|.|.++|+|+.||+ .+++|.+.+.+-.
T Consensus 354 ~~~~~G~y~l~fdNs~S~~--~~k~l~y~v~v~~ 385 (403)
T 1olm_A 354 TCSDPGIYVLRFDNTYSFI--HAKKVNFTVEVLL 385 (403)
T ss_dssp ECCSCEEEEEEEECTTCCC--CSEEEEEEEEEEC
T ss_pred EcCCCeEEEEEEeccccce--eceEEEEEEEEeC
Confidence 8999999999999999875 4688888877643
No 2
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=92.60 E-value=1.5 Score=29.13 Aligned_cols=65 Identities=20% Similarity=0.229 Sum_probs=41.2
Q ss_pred CCCcEEEEEEEEeeCC-CCCCCCeeEEEEECCCCCeEEeeecc--ceeeE--EEEe---ccCcceEEEEEeCC
Q 030061 52 NSNVVVLADYYVIDEA-HPEHPPTVSAKVTSPYGNNLHHNENV--THGQF--AFTT---TEAGNYMACFWLGS 116 (183)
Q Consensus 52 ~~~~~v~~~y~v~~~~-~~~~~~~v~~~V~dp~g~~v~~~~~~--~~g~f--~f~a---~~~G~Y~~Cf~n~~ 116 (183)
..|+.|.+..-+.+.. .|...+.+.+.|.||+|+.+.+.... ..|.+ .|.. ...|.|++-.....
T Consensus 14 rPGetV~~~~~~~~~~~~p~~~~~~~v~l~dp~g~~v~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~~~ 86 (102)
T 2p9r_A 14 KPGQTVKFRVVSMDENFHPLNELIPLVYIQDPKGNRIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQKKS 86 (102)
T ss_dssp CTTCEEEEEEEEECGGGCBCCCEEEEEEEECTTSCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEECTT
T ss_pred CCCCEEEEEEEEECCCCcCCCCCceEEEEECCCCCEEEEEEeecCCCCEEEEEEECCCCCCCeeEEEEEEECC
Confidence 3577887777666443 22222247899999999998774322 23433 3333 34699999998653
No 3
>2dj4_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=92.44 E-value=0.88 Score=30.84 Aligned_cols=86 Identities=19% Similarity=0.230 Sum_probs=49.5
Q ss_pred EcCCCcceeeeEcCCCc--EEEEEEEEeeCCCCCCCCeeEEEEECCCCCeEEee-ecccee--eEEEEeccCcceEEEEE
Q 030061 39 IPSSGTKCVSEEINSNV--VVLADYYVIDEAHPEHPPTVSAKVTSPYGNNLHHN-ENVTHG--QFAFTTTEAGNYMACFW 113 (183)
Q Consensus 39 I~~g~~~Cf~e~v~~~~--~v~~~y~v~~~~~~~~~~~v~~~V~dp~g~~v~~~-~~~~~g--~f~f~a~~~G~Y~~Cf~ 113 (183)
+.|.+-+|...-+..+. ....+|.|.....+ .. .+.+.|.+|+|..+..+ .+...| ..+|+....|.|.+.+.
T Consensus 9 ~d~sk~~v~G~Gl~~~v~~~~~~~F~V~~~~aG-~~-~l~V~i~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~ 86 (108)
T 2dj4_A 9 VDPSKVKIAGPGLGSGVRARVLQSFTVDSSKAG-LA-PLEVRVLGPRGLVEPVNVVDNGDGTHTVTYTPSQEGPYMVSVK 86 (108)
T ss_dssp CCTTSCEEESTTTSSCCBTTSCEEEEEECTTTC-SC-CEEEEEECSSSCEECCCCEECSSSEEEEEECCSSCEEEEEEEE
T ss_pred cccceeEEECCCcCcCccCCccEEEEEEECCCC-Cc-eEEEEEECCCCCEeeeEEEECCCCEEEEEEEeCCCeeEEEEEE
Confidence 44555556554444331 12245555533322 23 89999999999654332 222345 55678889999999888
Q ss_pred eCCCCCCCccEEE
Q 030061 114 LGSNPQKVADATL 126 (183)
Q Consensus 114 n~~~~~~~~~~~V 126 (183)
-....-...+..|
T Consensus 87 ~~g~~V~gSPF~v 99 (108)
T 2dj4_A 87 YADEEIPRSPFKV 99 (108)
T ss_dssp ESSSBCTTCSEEE
T ss_pred ECCEECCCCCEEE
Confidence 6654322345544
No 4
>2d7n_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=91.84 E-value=1.5 Score=29.12 Aligned_cols=54 Identities=17% Similarity=0.188 Sum_probs=37.4
Q ss_pred eeEEEEECCCCCeEEee-ecccee--eEEEEeccCcceEEEEEeCCCCCCCccEEEE
Q 030061 74 TVSAKVTSPYGNNLHHN-ENVTHG--QFAFTTTEAGNYMACFWLGSNPQKVADATLG 127 (183)
Q Consensus 74 ~v~~~V~dp~g~~v~~~-~~~~~g--~f~f~a~~~G~Y~~Cf~n~~~~~~~~~~~V~ 127 (183)
.+.+.|.+|+|..+... .+..+| ...|++.+.|.|.+++.-...+-.+.+..+.
T Consensus 23 ~l~v~V~~PsG~~~~~~v~d~~dGtY~v~ytP~e~G~h~v~V~~~g~~I~GSPF~v~ 79 (93)
T 2d7n_A 23 ELTGEVRMPSGKTARPNITDNKDGTITVRYAPTEKGLHQMGIKYDGNHIPGSPLQFY 79 (93)
T ss_dssp CEEEEEECTTSCEECCEEEECSSSCEEEEECCSSCEEEEEEEEESSSCCTTCSEEEE
T ss_pred CEEEEEECCCCCccceEEEECCCCEEEEEEEccCCEEEEEEEEECCEeCCCCCeEEE
Confidence 89999999999865322 222344 6678889999999999876553333555543
No 5
>4dzg_A PLIG; lysozyme inhibitor, G-type lysozyme binding, hydrolase inhib; HET: MLY; 2.02A {Aeromonas hydrophila subsp}
Probab=91.36 E-value=0.23 Score=34.47 Aligned_cols=70 Identities=11% Similarity=0.060 Sum_probs=50.1
Q ss_pred EEcCCCcceeeeEcCCCcEEEEEEEEeeCCCCCCCCeeEEEEECCCCCe---EEeeeccceeeEEEEeccCcceEEEEEe
Q 030061 38 QIPSSGTKCVSEEINSNVVVLADYYVIDEAHPEHPPTVSAKVTSPYGNN---LHHNENVTHGQFAFTTTEAGNYMACFWL 114 (183)
Q Consensus 38 ~I~~g~~~Cf~e~v~~~~~v~~~y~v~~~~~~~~~~~v~~~V~dp~g~~---v~~~~~~~~g~f~f~a~~~G~Y~~Cf~n 114 (183)
.|.+++...+.-.+.+|+.+.++. . +. . .+-+.|++|+|+. ++..+....+.|+-+.+.+|.|++=+..
T Consensus 23 ~I~g~~~~~Y~~~a~aGQ~l~V~l--s-~~----~-~~~f~I~~P~~~~~~~l~~g~~~~~~~~~g~LP~sG~Y~i~V~~ 94 (114)
T 4dzg_A 23 SFTGYDTIHYTLVAXAGQTMTVXI--G-GS----S-NANFNVFAPGAQPGQAEAIGRNDGDGQWQGALPASGXYLIQVYQ 94 (114)
T ss_dssp CCBTTCCEEEECCC-CCCEEEC-C--E-ES----T-TCEEEEECTTCCTTTSCCSEECCTTSCCEEECSSCC-CEEEEEC
T ss_pred EecCCCceEEEEEecCCCEEEEEe--C-CC----C-cEEEEEECCCCCcccceeccccCCcceEEEEecCCCcEEEEEEe
Confidence 467778888888889999988887 2 21 1 6778899999863 3443333346889999999999998887
Q ss_pred C
Q 030061 115 G 115 (183)
Q Consensus 115 ~ 115 (183)
.
T Consensus 95 ~ 95 (114)
T 4dzg_A 95 M 95 (114)
T ss_dssp C
T ss_pred c
Confidence 5
No 6
>2d7m_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=90.74 E-value=1.8 Score=29.51 Aligned_cols=66 Identities=11% Similarity=0.231 Sum_probs=41.2
Q ss_pred EEEEeeCCCCCCCCeeEEEEECCCCCeEEee-ecccee--eEEEEeccCcceEEEEEeCCCCCCCccEEEE
Q 030061 60 DYYVIDEAHPEHPPTVSAKVTSPYGNNLHHN-ENVTHG--QFAFTTTEAGNYMACFWLGSNPQKVADATLG 127 (183)
Q Consensus 60 ~y~v~~~~~~~~~~~v~~~V~dp~g~~v~~~-~~~~~g--~f~f~a~~~G~Y~~Cf~n~~~~~~~~~~~V~ 127 (183)
+|.|...+.+ .. .+.+.|.+|+|+.+..+ .+...| ..+|+....|.|++.+.-....-...+..|.
T Consensus 33 ~F~V~~~daG-~~-~l~V~v~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g~~I~gSPF~v~ 101 (115)
T 2d7m_A 33 EFTIDARDAG-EG-LLTVQILDPEGKPKKANIRDNGDGTYTVSYLPDMSGRYTITIKYGGDEIPYSPFRIH 101 (115)
T ss_dssp EEEEEESSSC-SS-CEEEEEECTTSCBCCEEEEECSSSCEEEEECCCSCEEEEEEEEESSCBCTTCSEEEE
T ss_pred EEEEEECCCC-CC-EEEEEEECCCCCeeeeEEEECCCCEEEEEEEeCCCceEEEEEEECCEECCCCCEEEE
Confidence 4555433222 23 89999999998754332 222345 5568889999999998876543233555554
No 7
>2ee9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.30 E-value=0.8 Score=30.67 Aligned_cols=53 Identities=13% Similarity=0.159 Sum_probs=36.3
Q ss_pred eeEEEEECCCCCeEEee-ecccee--eEEEEeccCcceEEEEEeCCCCCCCccEEE
Q 030061 74 TVSAKVTSPYGNNLHHN-ENVTHG--QFAFTTTEAGNYMACFWLGSNPQKVADATL 126 (183)
Q Consensus 74 ~v~~~V~dp~g~~v~~~-~~~~~g--~f~f~a~~~G~Y~~Cf~n~~~~~~~~~~~V 126 (183)
.+++.|.+|+|+.+-.. .+...| ...|+..+.|.|++++.-....-.+.+..+
T Consensus 31 ~ltv~V~~PsG~~~~~~v~d~~dGtY~v~ytP~e~G~h~v~V~~~G~~I~GSPF~v 86 (95)
T 2ee9_A 31 EITGEVHMPSGKTATPEIVDNKDGTVTVRYAPTEVGLHEMHIKYMGSHIPESPLQF 86 (95)
T ss_dssp SEEEEEECTTSCEECCEEEECSSSCEEEECCCCSSEEEEEEEEESSCBCTTCSEEE
T ss_pred CEEEEEECCCCCccccEEEeCCCCeEEEEEEecCCEeEEEEEEECCEECCCCCeEE
Confidence 89999999999765332 222344 567788999999999997654322345444
No 8
>2dmb_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=90.28 E-value=2.7 Score=29.23 Aligned_cols=55 Identities=18% Similarity=0.294 Sum_probs=37.0
Q ss_pred eeEEEEECCCCCeEEee-ecccee--eEEEEeccCcceEEEEEeCCCCCCCccEEEEE
Q 030061 74 TVSAKVTSPYGNNLHHN-ENVTHG--QFAFTTTEAGNYMACFWLGSNPQKVADATLGL 128 (183)
Q Consensus 74 ~v~~~V~dp~g~~v~~~-~~~~~g--~f~f~a~~~G~Y~~Cf~n~~~~~~~~~~~V~f 128 (183)
.+.+.|.+|+|..+..+ .+...| ...|+....|.|++.+.-....-...+..|..
T Consensus 44 ~l~V~I~~p~g~~v~~~v~d~~dGty~V~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~v 101 (124)
T 2dmb_A 44 KVTCTVLTPDGTEAEADVIENEDGTYDIFYTAAKPGTYVIYVRFGGVDIPNSPFTVMA 101 (124)
T ss_dssp CEEEEEECTTSCBCCCEEEECTTSCEEEEEECSSCEEEEEEEEESSCBCTTCSEEEEE
T ss_pred cEEEEEECCCCCEEeeEEEeCCCCEEEEEEEcCCCEEEEEEEEECCEECCCCCeEEEE
Confidence 89999999999654332 222344 56788999999999998765432234555533
No 9
>3rgh_A Filamin-A; cell adhesion, cytoskeleton-complex, disease mutation, immun like, cytoskeleton, actin-binding, cell junction, shape; HET: CME; 2.44A {Homo sapiens} SCOP: b.1.18.0
Probab=90.09 E-value=2.9 Score=27.77 Aligned_cols=54 Identities=15% Similarity=0.230 Sum_probs=34.5
Q ss_pred eeEEEEECCCCCeEEee-ecccee--eEEEEeccCcceEEEEEeCCCCCCCccEEEE
Q 030061 74 TVSAKVTSPYGNNLHHN-ENVTHG--QFAFTTTEAGNYMACFWLGSNPQKVADATLG 127 (183)
Q Consensus 74 ~v~~~V~dp~g~~v~~~-~~~~~g--~f~f~a~~~G~Y~~Cf~n~~~~~~~~~~~V~ 127 (183)
.+.+.|.+|.|..+..+ .+..+| ..+|+....|.|.+.+.-...+-..++..+.
T Consensus 40 ~l~v~i~~~~g~~~~~~v~d~~dGty~V~Y~p~~~G~y~i~V~~~g~~V~gSPf~v~ 96 (100)
T 3rgh_A 40 ELTIEICSEAGLPAEVYIQDHGDGTHTITYIPLCPGAYTVTIKYGGQPVPNFPSKLQ 96 (100)
T ss_dssp CEEEEEECTTSCBCEEEEEECSSSEEEEEEECCSSEEEEEEEEETTEECTTCSEEEE
T ss_pred eEEEEEECCCCCEeEEEEEeCCCCEEEEEEEeCCCeeEEEEEEECCEECCCCCEEEE
Confidence 89999999998754332 222345 5677888899999887755432123444443
No 10
>3cnk_A Filamin-A; FLNA24, X-RAY crystalography, homodimer, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; 1.65A {Homo sapiens}
Probab=89.64 E-value=2.7 Score=27.11 Aligned_cols=44 Identities=14% Similarity=0.172 Sum_probs=30.3
Q ss_pred eeEEEEECCCCCeEEee-ecccee--eEEEEeccCcceEEEEEeCCC
Q 030061 74 TVSAKVTSPYGNNLHHN-ENVTHG--QFAFTTTEAGNYMACFWLGSN 117 (183)
Q Consensus 74 ~v~~~V~dp~g~~v~~~-~~~~~g--~f~f~a~~~G~Y~~Cf~n~~~ 117 (183)
.+.+.|.+|+|..+..+ .+..+| ..+|+...+|.|.+.+.-...
T Consensus 31 ~l~v~v~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g~ 77 (89)
T 3cnk_A 31 MLLVGVHGPRTPCEEILVKHVGSRLYSVSYLLKDKGEYTLVVKWGHE 77 (89)
T ss_dssp CEEEEEECSSSCCSEEEEEEEETTEEEEEEECCSCEEEEEEEEETTE
T ss_pred cEEEEEECCCCCceeEEEEECCCCEEEEEEEECCCccEEEEEEECCE
Confidence 78889999998633221 222234 556788999999998886543
No 11
>2ee6_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.28 E-value=2.9 Score=28.03 Aligned_cols=53 Identities=15% Similarity=0.249 Sum_probs=36.7
Q ss_pred eeEEEEECCCCCeEEeeecccee--eEEEEeccCcceEEEEEeCCCCCCCccEEEE
Q 030061 74 TVSAKVTSPYGNNLHHNENVTHG--QFAFTTTEAGNYMACFWLGSNPQKVADATLG 127 (183)
Q Consensus 74 ~v~~~V~dp~g~~v~~~~~~~~g--~f~f~a~~~G~Y~~Cf~n~~~~~~~~~~~V~ 127 (183)
.+.+.|.+|.+..+ +-.+...| ..+|+...+|.|.+.+.-...+-...+..|.
T Consensus 43 ~l~v~v~~p~~~~v-~v~d~~dGty~v~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~ 97 (105)
T 2ee6_A 43 GLSIAVEGPSKAEI-TFDDHKNGSCGVSYIAQEPGNYEVSIKFNDEHIPESPYLVP 97 (105)
T ss_dssp CEEEEEESSSCEEE-EECCCCSSCCCEEEEESSCEEEEEEEEETTEECTTCSEEEE
T ss_pred cEEEEEECCCCCEE-EEEECCCCEEEEEEEECCCceEEEEEEECCEECCCcCEEEE
Confidence 88999999998655 32333455 7789999999999999866432223455543
No 12
>2d7p_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 PDB: 2eeb_A
Probab=88.27 E-value=3.9 Score=27.87 Aligned_cols=53 Identities=13% Similarity=0.132 Sum_probs=35.8
Q ss_pred eeEEEEECCCCCeEEee-ecccee--eEEEEeccCcceEEEEEeCCCCCCCccEEE
Q 030061 74 TVSAKVTSPYGNNLHHN-ENVTHG--QFAFTTTEAGNYMACFWLGSNPQKVADATL 126 (183)
Q Consensus 74 ~v~~~V~dp~g~~v~~~-~~~~~g--~f~f~a~~~G~Y~~Cf~n~~~~~~~~~~~V 126 (183)
.+++.|.+|+|..+-.. .+...| ..+|+..+.|.|.+.+.-....-.+.+..|
T Consensus 42 ~l~v~V~~P~g~~~~~~v~d~~~gty~v~ytP~~~G~h~v~V~~~g~~I~GSPF~v 97 (112)
T 2d7p_A 42 VIDARVHTPSGAVEECYVSELDSDKHTIRFIPHENGVHSIDVKFNGAHIPGSPFKI 97 (112)
T ss_dssp CEEEEEECSSSCBCCCEECSCBTTEEEEEECCSSCEEEEEEEEESSCBCTTCSEEE
T ss_pred CEEEEEECCCCCeeeeEEEeCCCCeEEEEEEcCCCEeEEEEEEECCeEcCCCCEEE
Confidence 89999999999764322 222334 667888999999998886654322355444
No 13
>3osv_A Flagellar basal-BODY ROD modification protein FLG; FLGD, flagellum, P. aeruginosa, structural protein; 2.35A {Pseudomonas aeruginosa}
Probab=87.16 E-value=3.2 Score=29.35 Aligned_cols=56 Identities=14% Similarity=0.085 Sum_probs=39.4
Q ss_pred cEEEEEEEEeeCCCCCCCCeeEEEEECCCCCeEEeee--ccceeeEEEEec---------cCcceEEEEEeC
Q 030061 55 VVVLADYYVIDEAHPEHPPTVSAKVTSPYGNNLHHNE--NVTHGQFAFTTT---------EAGNYMACFWLG 115 (183)
Q Consensus 55 ~~v~~~y~v~~~~~~~~~~~v~~~V~dp~g~~v~~~~--~~~~g~f~f~a~---------~~G~Y~~Cf~n~ 115 (183)
..+.+.|.+..+. . .+.+.|+|.+|++|++.. ..+.|.+.|+-. .+|.|++-+.-.
T Consensus 24 ~~~~~~~~l~~~a----~-~v~v~I~d~~G~~V~t~~~g~~~aG~~~f~WDG~d~~G~~~~~G~Y~~~v~a~ 90 (138)
T 3osv_A 24 DTFKASLNLPVSS----S-NVWVNVYDDKGTVVNRINLGQQAAGSVSFMWDGKDSSGNIMPPGTYKFEAQTS 90 (138)
T ss_dssp SCEEEEEEESBCE----E-EEEEEEECTTSCEEEEEEEEEECSEEEEEEECSBCTTSCBCCSEEEEEEEEEE
T ss_pred CeEEEEEECCCCC----c-EEEEEEEcCCCCEEEEEEcCCcCCceEEEEECCcCCCCCCCCCccEEEEEEEE
Confidence 4577888876432 3 899999999999998853 234565555542 368999988655
No 14
>2e9j_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=86.69 E-value=3 Score=28.60 Aligned_cols=84 Identities=13% Similarity=0.224 Sum_probs=47.8
Q ss_pred cCCCcceeeeEcCC-----CcEEEEEEEEeeCCCCCCCCeeEEEEECCCCCeEEee-ecccee--eEEEEeccCcceEEE
Q 030061 40 PSSGTKCVSEEINS-----NVVVLADYYVIDEAHPEHPPTVSAKVTSPYGNNLHHN-ENVTHG--QFAFTTTEAGNYMAC 111 (183)
Q Consensus 40 ~~g~~~Cf~e~v~~-----~~~v~~~y~v~~~~~~~~~~~v~~~V~dp~g~~v~~~-~~~~~g--~f~f~a~~~G~Y~~C 111 (183)
.|++-++...-+.. +... +|.|...+.+ .. .+.+.|.+|+|..+..+ .+...| ..+|+....|.|++.
T Consensus 20 d~~~~~~~G~Gl~~~~v~~g~~~--~F~V~~~daG-~~-~l~v~v~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~ 95 (119)
T 2e9j_A 20 DASKVTASGPGLSSYGVPASLPV--DFAIDARDAG-EG-LLAVQITDQEGKPKRAIVHDNKDGTYAVTYIPDKTGRYMIG 95 (119)
T ss_dssp CGGGEEEESGGGCSSCEETTSCE--EEEEEESSCC-CC-CEECCEECTTCCCCCEEEEECCSSEEEEEECCCSCSEEEEC
T ss_pred CcceeEEECCCcccCceecCCcE--EEEEEECCCC-CC-eEEEEEECCCCCEEEEEEEECCCCEEEEEEEeCCCEEEEEE
Confidence 44444555444432 3333 5555433322 23 88999999998654322 222345 556788899999998
Q ss_pred EEeCCCCCCCccEEEE
Q 030061 112 FWLGSNPQKVADATLG 127 (183)
Q Consensus 112 f~n~~~~~~~~~~~V~ 127 (183)
+.-....-...+..|.
T Consensus 96 V~~~g~~V~gSPF~v~ 111 (119)
T 2e9j_A 96 VTYGGDDIPLSPYRIR 111 (119)
T ss_dssp CEESSCBCTTCSEEEE
T ss_pred EEECCEECCCCCEEEE
Confidence 8866543223455543
No 15
>2nqc_A Filamin-C; immunoglobulin, metal binding, immune system; 2.05A {Homo sapiens} SCOP: b.1.18.10 PDB: 2d7q_A 2k3t_A
Probab=86.53 E-value=6.9 Score=27.77 Aligned_cols=53 Identities=19% Similarity=0.279 Sum_probs=35.7
Q ss_pred eeEEEEECCCCCeEEeeecccee-eEEEEeccCcceEEEEEeCC-CCCCCccEEEE
Q 030061 74 TVSAKVTSPYGNNLHHNENVTHG-QFAFTTTEAGNYMACFWLGS-NPQKVADATLG 127 (183)
Q Consensus 74 ~v~~~V~dp~g~~v~~~~~~~~g-~f~f~a~~~G~Y~~Cf~n~~-~~~~~~~~~V~ 127 (183)
.+++.|.+|++..+--.+. .+| ..+|+..++|.|.+-+.-.. .+-...+..|.
T Consensus 77 ~l~v~I~gPs~~~~~~~d~-~dGy~V~YtP~~~G~y~I~Vk~~g~~hI~GSPF~v~ 131 (138)
T 2nqc_A 77 ALSVTIDGPSKVQLDCREC-PEGHVVTYTPMAPGNYLIAIKYGGPQHIVGSPFKAK 131 (138)
T ss_dssp CEEEEEESSSCCEEEEEEE-TTEEEEEEECCSCEEEEEEEEESSSCBCTTCSEEEE
T ss_pred cEEEEEECCCCCeeeEEEC-CCcEEEEEEcCCCEEEEEEEEECCcccCCCCCeEEE
Confidence 8899999999875533332 233 66788899999999887655 32223455554
No 16
>3d33_A Domain of unknown function with AN immunoglobulin beta-sandwich fold; structural genomics, joint center for structural genomics; HET: MSE; 1.70A {Bacteroides vulgatus atcc 8482}
Probab=86.38 E-value=3.1 Score=28.50 Aligned_cols=55 Identities=9% Similarity=0.022 Sum_probs=40.4
Q ss_pred CcEEEEEEEEeeCCCCCCCCeeEEEEE-CCCCCeEEeeeccce--eeEEEEec--cCcceEEEEEeC
Q 030061 54 NVVVLADYYVIDEAHPEHPPTVSAKVT-SPYGNNLHHNENVTH--GQFAFTTT--EAGNYMACFWLG 115 (183)
Q Consensus 54 ~~~v~~~y~v~~~~~~~~~~~v~~~V~-dp~g~~v~~~~~~~~--g~f~f~a~--~~G~Y~~Cf~n~ 115 (183)
+..+.++|... .+.+.++|+ |..|++||++.-... ..+.+... .+|+|.+=+.+.
T Consensus 37 ~~~L~I~F~~~-------~~~vtItI~~~~tG~iVY~~~v~~~~~~~~~I~L~~~~~G~Y~L~i~~~ 96 (108)
T 3d33_A 37 GYLLTLKNASP-------DRDMTIRITDMAKGGVVYENDIPEVQSAYITISIANFPAEEYKLEITGT 96 (108)
T ss_dssp TTEEEEEESSC-------CSEEEEEEEETTTCCEEEEEEECGGGTTEEEEECTTSCSEEEEEEEEEE
T ss_pred CCEEEEEECCc-------CCCEEEEEEECCCCcEEEEEeecCCCCcEEEEEcCCccCceEEEEEEeC
Confidence 56777777322 129999999 788999999755332 45566664 689999999987
No 17
>1v05_A Filamin C; actin-binding protein, immunoglobulin; 1.43A {Homo sapiens} SCOP: b.1.18.10 PDB: 2eed_A
Probab=86.33 E-value=3.3 Score=27.13 Aligned_cols=44 Identities=16% Similarity=0.254 Sum_probs=30.0
Q ss_pred eeEEEEECCCCCeEEe-eecccee--eEEEEeccCcceEEEEEeCCC
Q 030061 74 TVSAKVTSPYGNNLHH-NENVTHG--QFAFTTTEAGNYMACFWLGSN 117 (183)
Q Consensus 74 ~v~~~V~dp~g~~v~~-~~~~~~g--~f~f~a~~~G~Y~~Cf~n~~~ 117 (183)
.+.+.|.+|.|..+.. -.+..+| ..+|+....|.|.+.+.-...
T Consensus 38 ~l~v~v~~p~~~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g~ 84 (96)
T 1v05_A 38 MMMVGVHGPKTPCEEVYVKHMGNRVYNVTYTVKEKGDYILIVKWGDE 84 (96)
T ss_dssp CEEEEEECSSSCCSEEEEEECSTTEEEEEEECSSCEEEEEEEEETTE
T ss_pred cEEEEEECCCCCeeEEEEEeCCCCEEEEEEEeCCCEEEEEEEEECCE
Confidence 8889999999853321 1222344 556788899999998886543
No 18
>2dia_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=86.12 E-value=4.6 Score=27.33 Aligned_cols=55 Identities=16% Similarity=0.225 Sum_probs=36.6
Q ss_pred eeEEEEECCCCCeEEee-ecccee--eEEEEeccCcceEEEEEeCCCCCCCccEEEEE
Q 030061 74 TVSAKVTSPYGNNLHHN-ENVTHG--QFAFTTTEAGNYMACFWLGSNPQKVADATLGL 128 (183)
Q Consensus 74 ~v~~~V~dp~g~~v~~~-~~~~~g--~f~f~a~~~G~Y~~Cf~n~~~~~~~~~~~V~f 128 (183)
.+.+.|.+|+|..+... .+..+| ..+|+....|.|++.+.-....-...+..|.+
T Consensus 43 ~l~v~i~~~~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g~~V~gSPf~v~v 100 (113)
T 2dia_A 43 ALGLEAVSDSGTKAEVSIQNNKDGTYAVTYVPLTAGMYTLTMKYGGELVPHFPARVKV 100 (113)
T ss_dssp CEEEEEEETTTEECEEEEEECTTSEEEEEEECSSCEEEEEEEEETTEECTTCSEEEEE
T ss_pred cEEEEEECCCCCEeeEEEEECCCCEEEEEEEeCCCccEEEEEEECCEECCCCCEEEEE
Confidence 88999999988654332 222345 56788899999999998665422234555544
No 19
>2dlg_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=85.23 E-value=2.1 Score=28.80 Aligned_cols=53 Identities=19% Similarity=0.147 Sum_probs=36.2
Q ss_pred eeEEEEECCCCCeEEee-ecccee--eEEEEeccCcceEEEEEeCCCCCCCccEEE
Q 030061 74 TVSAKVTSPYGNNLHHN-ENVTHG--QFAFTTTEAGNYMACFWLGSNPQKVADATL 126 (183)
Q Consensus 74 ~v~~~V~dp~g~~v~~~-~~~~~g--~f~f~a~~~G~Y~~Cf~n~~~~~~~~~~~V 126 (183)
.+.+.|.+|+|..+-.. .+..+| ..+|+..+.|.|.+.+.-...+-.+.+..|
T Consensus 32 ~l~v~v~~P~G~~~~~~v~d~~dGty~v~ytP~e~G~h~v~V~~~g~~I~GSPF~v 87 (102)
T 2dlg_A 32 DMSAHVTSPSGRVTEAEIVPMGKNSHCVRFVPQEMGVHTVSVKYRGQHVTGSPFQF 87 (102)
T ss_dssp GCEEEEECTTSCEEECEEEECSSSEEEEEBCCCTTCEEEEEEESSSSBCSSCSEEE
T ss_pred CEEEEEECCCCCEeeeEEEECCCCEEEEEEEecCCEeEEEEEEECCEeCCCCCeEE
Confidence 89999999999765432 222344 556888999999999986654322345444
No 20
>3c12_A FLGD, flagellar protein; HOOK capping, IG-like domain, FN-III domain, tudor-like domain, flagellar biogenesis, flagellum; 2.51A {Xanthomonas campestris PV}
Probab=84.82 E-value=5.5 Score=28.08 Aligned_cols=54 Identities=15% Similarity=0.098 Sum_probs=37.9
Q ss_pred EEEEEEEEeeCCCCCCCCeeEEEEECCCCCeEEeee--ccceeeEEEEec---------cCcceEEEEEeC
Q 030061 56 VVLADYYVIDEAHPEHPPTVSAKVTSPYGNNLHHNE--NVTHGQFAFTTT---------EAGNYMACFWLG 115 (183)
Q Consensus 56 ~v~~~y~v~~~~~~~~~~~v~~~V~dp~g~~v~~~~--~~~~g~f~f~a~---------~~G~Y~~Cf~n~ 115 (183)
.+.+.|. ... .. .+.+.|+|.+|++|.+.. ..+.|.+.|+-. .+|.|++.+.-.
T Consensus 28 ~~~~~~~-~~~----a~-~v~v~I~d~~G~~V~t~~~~~~~aG~~~~~WDg~d~~G~~~~~G~Y~~~v~a~ 92 (138)
T 3c12_A 28 SAKGVVA-ATS----AG-FVNFEITDANGTFVKQLSVPASAAGEVSFAWDGTDANGNRMAAGKYGITATQT 92 (138)
T ss_dssp CEEEEEE-ESS----SE-EEEEEEECSSCCEEEEEEEEESSSEEEEEEECSBCTTSCBCCSEEEEEEEEEE
T ss_pred eEEEEEe-cCC----CC-EEEEEEEeCCCCEEEEEEcCCcCCceEEEEECCcCCCCCCCCCceEEEEEEEE
Confidence 3566676 532 23 899999999999998754 235666666642 368999999755
No 21
>2w0p_A Filamin-A; alternative splicing, cytoskeleton/complex, phosphoprotein, disease mutation, immunoglobulin like, zinc, complex; 1.90A {Homo sapiens} SCOP: b.1.18.10 PDB: 2brq_A* 2jf1_A 3isw_A
Probab=83.86 E-value=6.9 Score=25.46 Aligned_cols=53 Identities=13% Similarity=0.255 Sum_probs=34.8
Q ss_pred eeEEEEECCCCCeEEeeecccee--eEEEEeccCcceEEEEEeCCCCCCCccEEEE
Q 030061 74 TVSAKVTSPYGNNLHHNENVTHG--QFAFTTTEAGNYMACFWLGSNPQKVADATLG 127 (183)
Q Consensus 74 ~v~~~V~dp~g~~v~~~~~~~~g--~f~f~a~~~G~Y~~Cf~n~~~~~~~~~~~V~ 127 (183)
.+.+.|.+|.+..+.-.++ .+| ..+|+...+|.|.+.+.-...+-..++..|.
T Consensus 35 ~~~v~v~gp~~~~~~v~d~-~dGty~v~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~ 89 (94)
T 2w0p_A 35 GLAIAVEGPSKAEISFEDR-KDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVP 89 (94)
T ss_dssp CEEEEEEESSCCEEEEEEC-TTSCEEEEEECSSCEEEEEEEEETTEECTTCSEEEE
T ss_pred cEEEEEECCCCCeEEEEEC-CCCEEEEEEEECCCceEEEEEEECCEECCCCCEEEE
Confidence 7888888998855433332 344 6678889999999998865432223455544
No 22
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=82.27 E-value=12 Score=27.62 Aligned_cols=53 Identities=11% Similarity=0.157 Sum_probs=36.3
Q ss_pred eeEEEEECCCCCeEEeeecccee--eEEEEeccCcceEEEEEeCCCCCCCccEEEE
Q 030061 74 TVSAKVTSPYGNNLHHNENVTHG--QFAFTTTEAGNYMACFWLGSNPQKVADATLG 127 (183)
Q Consensus 74 ~v~~~V~dp~g~~v~~~~~~~~g--~f~f~a~~~G~Y~~Cf~n~~~~~~~~~~~V~ 127 (183)
.+.+.|.+|.+..+.-.+ ..+| ..+|+....|.|.+++.-...+-.+.+..|.
T Consensus 129 ~l~v~I~gp~~~~~~~~d-~~dGty~v~Y~p~~~G~y~i~V~~~g~~I~gSPF~v~ 183 (188)
T 2k7p_A 129 GLSLAIEGPSKAEISCTD-NQDGTCSVSYLPVLPGDYSILVKYNEQHVPGSPFTAR 183 (188)
T ss_dssp CEEEEEECSSCCEEEEEE-CTTSEEEEEEECCSSEEEEEEEEETTEECTTCSEEEE
T ss_pred CeEEEEeCCCCCeEEEEE-CCCCEEEEEEEeCCCEEEEEEEEECCEECCCCCEEEE
Confidence 788999999885553333 2355 7788999999999999866532223445544
No 23
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=81.43 E-value=6 Score=32.47 Aligned_cols=95 Identities=11% Similarity=0.083 Sum_probs=58.5
Q ss_pred ceeeeEEEEEcCCCcceeeeEcCC-CcEE--EEEEEEeeCCCCCCCCeeEEEEECCCCCeEEe---eecccee--eEEEE
Q 030061 30 PVTEAIWLQIPSSGTKCVSEEINS-NVVV--LADYYVIDEAHPEHPPTVSAKVTSPYGNNLHH---NENVTHG--QFAFT 101 (183)
Q Consensus 30 ~~~~al~f~I~~g~~~Cf~e~v~~-~~~v--~~~y~v~~~~~~~~~~~v~~~V~dp~g~~v~~---~~~~~~g--~f~f~ 101 (183)
.+...+.-...|.+.+|+.--+.. +..+ ..+|.|...+.+ .- .+++.|.+|+|..+-. ..+...| ..+|+
T Consensus 243 ~~~~~l~~k~~pskv~a~GpGle~~g~~vg~p~~F~Vdt~~AG-~g-~l~v~V~~P~G~~~~~~v~~~~~~~gty~v~y~ 320 (347)
T 4b7l_A 243 KPGAPLKPKLNPKKARAYGRGIEPTGNMVKQPAKFTVDTISAG-QG-DVMVFVEDPEGNKEEAQVTPDSDKNKTYSVEYL 320 (347)
T ss_dssp CTTCCCCCSCCGGGCEEESGGGSSSCCCTTSCEEEEEECTTTC-SC-CEEEEEECTTSCEEECEEEESSTTCSEEEEEEC
T ss_pred CccccccccccccceeEEeccccccCceeCCEEEEEEEeCCCC-CC-ceEEEEECCCCCeecCEEEEEcCCCCEEEEEEE
Confidence 445555666777788888887764 2221 345555533322 22 8999999999976532 2222345 45788
Q ss_pred eccCcceEEEEEeCCCCCCCccEEE
Q 030061 102 TTEAGNYMACFWLGSNPQKVADATL 126 (183)
Q Consensus 102 a~~~G~Y~~Cf~n~~~~~~~~~~~V 126 (183)
+.+.|.|++-+.-....-.+++..|
T Consensus 321 P~~~G~~~I~V~~~g~~IpgSPF~v 345 (347)
T 4b7l_A 321 PKVTGLHKVTVLFAGQHISKSPFEV 345 (347)
T ss_dssp CCSSSEEEEEEEETTEECTTCSEEE
T ss_pred ECCCEeEEEEEEECCEECCCCCEEe
Confidence 9999999998876543222345544
No 24
>2dmc_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=80.79 E-value=3.7 Score=28.23 Aligned_cols=53 Identities=13% Similarity=0.267 Sum_probs=36.0
Q ss_pred eeEEEEECCCCCeEEee-ecccee--eEEEEeccCcceEEEEEeCCCCCCCccEEE
Q 030061 74 TVSAKVTSPYGNNLHHN-ENVTHG--QFAFTTTEAGNYMACFWLGSNPQKVADATL 126 (183)
Q Consensus 74 ~v~~~V~dp~g~~v~~~-~~~~~g--~f~f~a~~~G~Y~~Cf~n~~~~~~~~~~~V 126 (183)
.+++.|.+|+|+.+-.. .+..+| ..+|+..+.|.|.+.+.-...+-.+.+..|
T Consensus 46 ~l~v~v~~PsG~~~~~~v~~~~~g~y~v~ftP~e~G~h~v~V~~~g~~I~GSPF~v 101 (116)
T 2dmc_A 46 SLTASIKAPSGRDEPCLLKRLPNNHIGISFIPREVGEHLVSIKKNGNHVANSPVSI 101 (116)
T ss_dssp TBCCEEECTTSCBCCEEEEEETTTEEEEEECCCSCEEEEEECBBSSSBCTTCSEEE
T ss_pred CEEEEEECCCCCEEeeEEEeCCCCeEEEEEEeCCCeeEEEEEEECCEECCCCCeEE
Confidence 88999999999754322 112334 668899999999999886654323355444
No 25
>4g9s_B Inhibitor of G-type lysozyme, goose-type lysozyme; hydrolase inhibitor, hydrolase-hydrolase inhibitor; HET: FLC; 0.95A {Escherichia coli} PDB: 4dy3_A* 4dxz_A* 4dy5_A
Probab=80.27 E-value=4.5 Score=27.46 Aligned_cols=74 Identities=7% Similarity=-0.064 Sum_probs=52.9
Q ss_pred eeEEEEEcCCCcceeeeEcCCCcEEEEEEEEeeCCCCCCCCeeEEEEECCCCCeEEee---eccceeeEEEEeccCcceE
Q 030061 33 EAIWLQIPSSGTKCVSEEINSNVVVLADYYVIDEAHPEHPPTVSAKVTSPYGNNLHHN---ENVTHGQFAFTTTEAGNYM 109 (183)
Q Consensus 33 ~al~f~I~~g~~~Cf~e~v~~~~~v~~~y~v~~~~~~~~~~~v~~~V~dp~g~~v~~~---~~~~~g~f~f~a~~~G~Y~ 109 (183)
..+.=.|.+++...+.-.+.+|+.+.++.. .+ ...+.|..|.+...... ......++..+.+.+|+|+
T Consensus 16 a~v~G~I~g~~~~~Y~~~a~aGQ~l~v~l~---s~------~~~~~i~~pg~~~~~~~~~~~~~~~~~~~~~LP~sG~Y~ 86 (111)
T 4g9s_B 16 AQYSGEIKGYDYDTYTFYAKKGQKVHVSIS---NE------GADTYLFGPGIDDSVDLSRYSPELDSHGQYSLPASGKYE 86 (111)
T ss_dssp EEEEEEEETTCCEEEEEEECTTCEEEEEES---CT------TCEEEEECTTCSSCEECSTTCTTCCTTSCEECSSSEEEE
T ss_pred eEEEEEEeCCCceEEEEEecCCCEEEEEEe---cC------CccEEEECCCCccccccccccccCCceEEEEecCCccEE
Confidence 345667888888999999999999988753 21 44566888876543322 1223457888899999999
Q ss_pred EEEEeC
Q 030061 110 ACFWLG 115 (183)
Q Consensus 110 ~Cf~n~ 115 (183)
+=+...
T Consensus 87 I~V~~~ 92 (111)
T 4g9s_B 87 LRVLQT 92 (111)
T ss_dssp EEEECC
T ss_pred EEEEec
Confidence 999854
No 26
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=79.62 E-value=13 Score=25.80 Aligned_cols=37 Identities=3% Similarity=-0.080 Sum_probs=26.6
Q ss_pred CCcEEEEEEEEeeCCC-------CCCCCeeEEEEECCCCCeEEee
Q 030061 53 SNVVVLADYYVIDEAH-------PEHPPTVSAKVTSPYGNNLHHN 90 (183)
Q Consensus 53 ~~~~v~~~y~v~~~~~-------~~~~~~v~~~V~dp~g~~v~~~ 90 (183)
.|..+.+.+.|.+.+. +..+ ..+|.|+|++|+.||..
T Consensus 16 ~g~~v~~~ltv~N~s~~~v~l~f~Sgq-~~Df~v~d~~G~~Vwrw 59 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSERAIEFQFSTGQ-KFELVVYDSEHKERYRY 59 (120)
T ss_dssp CSSCEEEEEEEEECSSSCEEEEESSSC-CEEEEEECTTCCEEEET
T ss_pred CCCeEEEEEEEEcCCCCcEEEEeCCCC-EEEEEEECCCCCEEEEc
Confidence 4567777777764331 2345 88999999999999954
No 27
>3irp_X URO-adherence factor A; DEV-IGG fold, cell WALL, hemagglutinin, peptidoglycan-anchor secreted, virulence, cell adhesion; 1.50A {Staphylococcus saprophyticus subsp} PDB: 3irz_A 3is0_X 3is1_X
Probab=79.54 E-value=2.6 Score=35.85 Aligned_cols=43 Identities=21% Similarity=0.447 Sum_probs=37.6
Q ss_pred CeeEEEEECCCCCeEEeeeccceeeEEEEeccCcceEEEEEeC
Q 030061 73 PTVSAKVTSPYGNNLHHNENVTHGQFAFTTTEAGNYMACFWLG 115 (183)
Q Consensus 73 ~~v~~~V~dp~g~~v~~~~~~~~g~f~f~a~~~G~Y~~Cf~n~ 115 (183)
+.+.+.+++++|.++....--..|.|.|.--.+|.|.+-|..+
T Consensus 330 ~gv~v~L~d~~G~~v~tttTd~~G~Y~F~~L~~G~Y~V~~~~P 372 (429)
T 3irp_X 330 AGITVNLLDPTGIRLATTTTDITGHYNFDNLTNGNYLVEFVMP 372 (429)
T ss_dssp TTCEEEEECTTSCEEEEEECCTTSEEEEEEEESEEEEEEECCC
T ss_pred CCeEEEEEcCCCCEEEEEEeCCCCeEEeCCCCCCcEEEEEECC
Confidence 3899999999999887766567999999999999999999755
No 28
>2dic_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=79.13 E-value=12 Score=24.94 Aligned_cols=52 Identities=13% Similarity=0.238 Sum_probs=34.5
Q ss_pred eeEEEEECCCCCeEEeeecccee--eEEEEeccCcceEEEEEeCCCCCCCccEEE
Q 030061 74 TVSAKVTSPYGNNLHHNENVTHG--QFAFTTTEAGNYMACFWLGSNPQKVADATL 126 (183)
Q Consensus 74 ~v~~~V~dp~g~~v~~~~~~~~g--~f~f~a~~~G~Y~~Cf~n~~~~~~~~~~~V 126 (183)
.+.+.|.+|.+..+.-.++ ..| ..+|+...+|.|++.+.-...+-.+.+..+
T Consensus 43 ~l~v~v~gp~~~~~~v~d~-~dGty~v~Y~p~~~G~y~I~V~~~g~~I~gSPF~v 96 (105)
T 2dic_A 43 GLGITVEGPSESKINCRDN-KDGSCSAEYIPFAPGDYDVNITYGGAHIPGSPFRV 96 (105)
T ss_dssp CEEEEEESSSCCCCEEEEC-SSSCEEEEECCSSCEEEEEEEEETTEECTTCSEEE
T ss_pred ceEEEEECCCCCeEEEEEC-CCCeEEEEEEeCCCeEEEEEEEECCEECCCCCEEE
Confidence 7888899998854433332 345 667888999999999986643222345444
No 29
>2bp3_A Filamin A; structural protein, cytoskeleton/complex, actin binding protein, cytoskeleton, complex; 2.32A {Homo sapiens} SCOP: b.1.18.10 PDB: 2aav_A
Probab=78.37 E-value=11 Score=24.47 Aligned_cols=54 Identities=13% Similarity=0.203 Sum_probs=35.6
Q ss_pred eeEEEEECCCCCeEEeeecccee--eEEEEeccCcceEEEEEeCCCCCCCccEEEEE
Q 030061 74 TVSAKVTSPYGNNLHHNENVTHG--QFAFTTTEAGNYMACFWLGSNPQKVADATLGL 128 (183)
Q Consensus 74 ~v~~~V~dp~g~~v~~~~~~~~g--~f~f~a~~~G~Y~~Cf~n~~~~~~~~~~~V~f 128 (183)
.+.+.|.+|.+..+.-.+. .+| ..+|+...+|.|.+.+.-...+-.+.+..+.+
T Consensus 38 ~l~v~v~~p~~~~~~v~d~-~dGty~v~Y~p~~~G~y~i~V~~~g~~I~gSPF~v~v 93 (97)
T 2bp3_A 38 GLSLAIEGPSKAEISCTDN-QDGTCSVSYLPVLPGDYSILVKYNEQHVPGSPFTARV 93 (97)
T ss_dssp EEEEEEEESSCCEEEEEEC-SSSEEEEEEECSSCEEEEEEEEETTEECTTCSEEEEE
T ss_pred cEEEEEECCCCCEEEEEEC-CCCEEEEEEEeCCCCcEEEEEEECCEECCCcCEEEEE
Confidence 8888999998855433332 344 67788899999999988654322234555543
No 30
>2eec_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=78.03 E-value=14 Score=25.45 Aligned_cols=66 Identities=17% Similarity=0.306 Sum_probs=40.6
Q ss_pred EEEEeeCCCCCCCCeeEEEEECCCCCeEEeeecccee-eEEEEeccCcceEEEEEeCC-CCCCCccEEEEE
Q 030061 60 DYYVIDEAHPEHPPTVSAKVTSPYGNNLHHNENVTHG-QFAFTTTEAGNYMACFWLGS-NPQKVADATLGL 128 (183)
Q Consensus 60 ~y~v~~~~~~~~~~~v~~~V~dp~g~~v~~~~~~~~g-~f~f~a~~~G~Y~~Cf~n~~-~~~~~~~~~V~f 128 (183)
+|.+...+.+ .. .+.+.|.+|++..+--.+. .+| ..+|+....|.|.+.+.-.. .+-.+.+..+.+
T Consensus 41 ~F~v~t~daG-~~-~l~v~i~gp~~~~~~~~d~-~dGy~V~Y~P~~~G~y~I~V~~~g~~hI~gSPF~v~v 108 (125)
T 2eec_A 41 EFFINTTRAG-PG-TLSVTIEGPSKVKMDCQET-PEGYKVMYTPMAPGNYLISVKYGGPNHIVGSPFKAKV 108 (125)
T ss_dssp EEEEECTTTC-SC-CEEEEEESSSCCCCEEEEC-SSSEEEEECCSSCEEEEEEEEESSSCBCTTCSEEEEE
T ss_pred EEEEEEcCCC-CC-cEEEEEECCCCCcceeEEC-CCCEEEEEEcCCCeEEEEEEEECCcccCCCCCeEEEE
Confidence 3555543322 23 8999999999865433332 344 55678889999999888655 332235555543
No 31
>4fxk_A Complement C4 beta chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_A*
Probab=77.62 E-value=26 Score=30.50 Aligned_cols=63 Identities=16% Similarity=0.246 Sum_probs=41.6
Q ss_pred CCcEEEEEEEEeeCC-CCCCCCeeEEEEECCCCCeEEeeecc-ceeeEEEE--e---ccCcceEEEEEeCC
Q 030061 53 SNVVVLADYYVIDEA-HPEHPPTVSAKVTSPYGNNLHHNENV-THGQFAFT--T---TEAGNYMACFWLGS 116 (183)
Q Consensus 53 ~~~~v~~~y~v~~~~-~~~~~~~v~~~V~dp~g~~v~~~~~~-~~g~f~f~--a---~~~G~Y~~Cf~n~~ 116 (183)
.|+.|++..-+.+.. .|.+. .+.+.|.||+|+.+.++... ..|-|++. . ...|.|++-+....
T Consensus 133 PGqtV~~r~i~~d~~~~p~~~-~~~v~i~dp~g~~v~~~~~~~~~G~~~~~f~Lp~~~~~G~w~i~v~~~~ 202 (656)
T 4fxk_A 133 PGQRVRYRVFALDQKMRPSTD-TITVMVENSHGLRVRKKEVYMPSSIFQDDFVIPDISEPGTWKISARFSD 202 (656)
T ss_dssp TTCEEEEEEEEECSSSSBCCC-CEEEEEECTTCCEEEEEEECCTTSEEEEEEECCTTCCSEEEEEEEEESS
T ss_pred CCCEEEEEEEEECCccCcCcc-cceEEEECCCCcEEeeeEEecCCceEEEEecCCCCCCCcCEEEEEEEcC
Confidence 477777766666543 23344 88999999999998765332 34544443 2 34699999987543
No 32
>2dib_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=75.81 E-value=6.1 Score=27.27 Aligned_cols=55 Identities=16% Similarity=0.228 Sum_probs=35.9
Q ss_pred eeEEEEECCCCCeEEee-ecccee--eEEEEeccCcceEEEEEeCCCCCCCccEEEEE
Q 030061 74 TVSAKVTSPYGNNLHHN-ENVTHG--QFAFTTTEAGNYMACFWLGSNPQKVADATLGL 128 (183)
Q Consensus 74 ~v~~~V~dp~g~~v~~~-~~~~~g--~f~f~a~~~G~Y~~Cf~n~~~~~~~~~~~V~f 128 (183)
.+.+.|.+|+|..+.-. .+...| ..+|+..+.|.|++.+.-....-...+..|.+
T Consensus 58 ~~~v~i~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~~~i~V~~~g~~I~gSPF~v~v 115 (128)
T 2dib_A 58 HIKAHIANPSGASTECFVTDNADGTYQVEYTPFEKGLHVVEVTYDDVPIPNSPFKVAV 115 (128)
T ss_dssp CCCEECCCSSSCCCCCEEEECSSSEEEEEECCSSCSEEEEEEBSSSCBCTTCSEEEEC
T ss_pred cEEEEEECCCCCEeeeEEEECCCCEEEEEEEeCCCEeEEEEEEECCEECCCCCEEEEE
Confidence 78889999998654322 222344 55678899999999998665432234555533
No 33
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=74.64 E-value=13 Score=27.46 Aligned_cols=53 Identities=15% Similarity=0.330 Sum_probs=35.3
Q ss_pred eeEEEEECCCCCeEEeeecccee--eEEEEeccCcceEEEEEeCCCCCCCccEEEE
Q 030061 74 TVSAKVTSPYGNNLHHNENVTHG--QFAFTTTEAGNYMACFWLGSNPQKVADATLG 127 (183)
Q Consensus 74 ~v~~~V~dp~g~~v~~~~~~~~g--~f~f~a~~~G~Y~~Cf~n~~~~~~~~~~~V~ 127 (183)
.+.+.|.+|.+..+.-.+ ...| ..+|++..+|.|.+++.-...+-...+..|.
T Consensus 129 ~l~v~V~gp~~~~~~v~d-~~dGty~v~Y~p~~~G~y~i~V~~~g~~I~gSPF~v~ 183 (191)
T 2k7q_A 129 GLSLSIEGPSKVDINTED-LEDGTCRVTYCPTEPGNYIINIKFADQHVPGSPFSVK 183 (191)
T ss_dssp EEEEEEEESSCEEEEEEE-CTTSCEEEEEEESSCEEEEEEEEETTEECTTCSEEEE
T ss_pred ceEEEEECCCCceEEEEE-CCCCEEEEEEEeCCCceEEEEEEECCEECCCCCEEEE
Confidence 788889999875442222 2345 7889999999999999866542223444443
No 34
>2eea_A Filamin-B; beta-sandwich, immunoglobulin-like fold, interaction with GP1BA, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=73.92 E-value=18 Score=24.41 Aligned_cols=54 Identities=11% Similarity=0.147 Sum_probs=36.5
Q ss_pred eeEEEEECCCCCeEEeeecccee--eEEEEeccCcceEEEEEeCCCCCCCccEEEEE
Q 030061 74 TVSAKVTSPYGNNLHHNENVTHG--QFAFTTTEAGNYMACFWLGSNPQKVADATLGL 128 (183)
Q Consensus 74 ~v~~~V~dp~g~~v~~~~~~~~g--~f~f~a~~~G~Y~~Cf~n~~~~~~~~~~~V~f 128 (183)
.+.+.|.+|.+..+. -.+..+| ..+|+...+|.|.+.+.-...+-...+..|.+
T Consensus 53 ~l~v~v~~p~~~~~~-v~d~~dGty~v~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~v 108 (115)
T 2eea_A 53 GLDLAIEGPSKAEIS-CIDNKDGTCTVTYLPTLPGDYSILVKYNDKHIPGSPFTAKI 108 (115)
T ss_dssp CEEEEEESSSCCEEC-CBCCSSSEEEEEEECSSCSCEEEEEEESSSBCTTCSEEEEE
T ss_pred ceEEEEECCCCceEE-EEECCCCEEEEEEEeCCCeeEEEEEEECCEECCCCCEEEEE
Confidence 889999999985442 2223445 67788899999999888655432235555543
No 35
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=72.98 E-value=27 Score=27.62 Aligned_cols=52 Identities=12% Similarity=0.171 Sum_probs=35.9
Q ss_pred eeEEEEECCCCCeEEee-eccceee--EEEEeccCcceEEEEEeCCCCCCCccEEE
Q 030061 74 TVSAKVTSPYGNNLHHN-ENVTHGQ--FAFTTTEAGNYMACFWLGSNPQKVADATL 126 (183)
Q Consensus 74 ~v~~~V~dp~g~~v~~~-~~~~~g~--f~f~a~~~G~Y~~Cf~n~~~~~~~~~~~V 126 (183)
.+.+.|.+|+| .+... .+...|. .+|+....|.|.+++.-....-.+.+..|
T Consensus 235 ~l~v~i~~p~g-~~~~~v~d~~~G~y~v~y~p~~~G~y~i~V~~~g~~I~gsPf~v 289 (311)
T 1wlh_A 235 KFEVSITGPAE-EITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLNGKHIEGSPFKQ 289 (311)
T ss_dssp CEEEEEESCCS-EEEEEEEECSSSEEEEEEEEECSEEEEEEEEETTEECTTCSEEE
T ss_pred cEEEEEECCCC-CceeEEEECCCCEEEEEEECCCCEeEEEEEEECCEECCCCCEEE
Confidence 78999999999 54322 2334565 78899999999999997654322334444
No 36
>2k9u_A Gamma filamin; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=71.99 E-value=20 Score=24.28 Aligned_cols=53 Identities=13% Similarity=0.243 Sum_probs=36.2
Q ss_pred eeEEEEECCCCCeEEeeecccee--eEEEEeccCcceEEEEEeCCCCCCCccEEEE
Q 030061 74 TVSAKVTSPYGNNLHHNENVTHG--QFAFTTTEAGNYMACFWLGSNPQKVADATLG 127 (183)
Q Consensus 74 ~v~~~V~dp~g~~v~~~~~~~~g--~f~f~a~~~G~Y~~Cf~n~~~~~~~~~~~V~ 127 (183)
.+.+.|.+|.+-.+.-.+ ..+| ..+|+...+|.|.+.+.-...+-...+..+.
T Consensus 50 ~l~v~v~~p~~~~~~v~d-~~dGty~v~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~ 104 (119)
T 2k9u_A 50 GLSIAVEGPSKAEIAFED-RKDGSCGVSYVVQEPGDYEVSIKFNDEHIPDSPFVVP 104 (119)
T ss_dssp EEEEEEESSSCCEEEEEC-CSSSEEEEEEECCSSEEEEEEEEETSCBCSSCSEEEE
T ss_pred cEEEEEeCCCCCeEEEEE-CCCCEEEEEEEECCCceEEEEEEECCEECCCCCEEEE
Confidence 899999999884432222 2345 6778889999999999866543233555553
No 37
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=70.64 E-value=13 Score=25.77 Aligned_cols=19 Identities=37% Similarity=0.597 Sum_probs=13.1
Q ss_pred ceeeEEEEeccCcceEE-EE
Q 030061 94 THGQFAFTTTEAGNYMA-CF 112 (183)
Q Consensus 94 ~~g~f~f~a~~~G~Y~~-Cf 112 (183)
+...++++..++|.|.+ |-
T Consensus 101 pG~t~~~tF~~~G~y~y~C~ 120 (132)
T 3c75_A 101 KDQAYAITFNEAGSYDYFCT 120 (132)
T ss_dssp TTEEEEEEECSCEEEEEECS
T ss_pred CCCEEEEEcCCCEEEEEEeC
Confidence 34456666678999976 74
No 38
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=68.87 E-value=33 Score=25.48 Aligned_cols=43 Identities=14% Similarity=0.272 Sum_probs=32.4
Q ss_pred eeEEEEECCCCCeEEee-ecccee--eEEEEeccCcceEEEEEeCCC
Q 030061 74 TVSAKVTSPYGNNLHHN-ENVTHG--QFAFTTTEAGNYMACFWLGSN 117 (183)
Q Consensus 74 ~v~~~V~dp~g~~v~~~-~~~~~g--~f~f~a~~~G~Y~~Cf~n~~~ 117 (183)
.+.+.|.+|+| .+... .+...| ..+|+....|.|.+++.-...
T Consensus 136 ~l~v~i~~p~g-~~~~~v~d~~dGty~v~y~p~~~G~y~v~V~~~g~ 181 (212)
T 1qfh_A 136 KFEVSITGPAE-EITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLNGK 181 (212)
T ss_dssp CEEEEEEECCS-EEEEEEEECSSSEEEEEEEEESSEEEEEEEEETTE
T ss_pred cEEEEEECCCC-ceeeEEEECCCCEEEEEEEcCCCEEEEEEEEECCE
Confidence 89999999999 43222 233466 678899999999999997654
No 39
>2ds4_A Tripartite motif protein 45; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=68.85 E-value=22 Score=23.44 Aligned_cols=54 Identities=15% Similarity=0.201 Sum_probs=34.3
Q ss_pred eeEEEEECCCC--CeEE-eeecccee--eEEEEeccCcceEEEEEeCCCCCCCccEEEE
Q 030061 74 TVSAKVTSPYG--NNLH-HNENVTHG--QFAFTTTEAGNYMACFWLGSNPQKVADATLG 127 (183)
Q Consensus 74 ~v~~~V~dp~g--~~v~-~~~~~~~g--~f~f~a~~~G~Y~~Cf~n~~~~~~~~~~~V~ 127 (183)
.+.+.|.+|++ ..+. .-.+..+| ..+|+....|.|.+++.-...+-...+..|.
T Consensus 50 ~~~v~i~~p~~~~~~~~~~v~D~~dGty~v~y~p~~~G~y~i~V~~~g~~i~gSPF~v~ 108 (113)
T 2ds4_A 50 NVQVAVVPKDKKDSPVRTMVQDNKDGTYYISYTPKEPGVYTVWVCIKEQHVQGSPFTVT 108 (113)
T ss_dssp CEEEEEEESSCSSCCCEEEEECCSSSEEEEEEECSSSEEEEEEEEESSCBCTTCSEEEE
T ss_pred eEEEEEEecCCCCceeEEEEEECCCCEEEEEEEeCCCeEEEEEEEECCEECCCCCEEEE
Confidence 78999999886 2322 22223345 5567889999999998876543223455554
No 40
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=68.51 E-value=14 Score=27.29 Aligned_cols=44 Identities=16% Similarity=0.243 Sum_probs=32.5
Q ss_pred eeEEEEECCCCCeEEee-ecccee--eEEEEeccCcceEEEEEeCCC
Q 030061 74 TVSAKVTSPYGNNLHHN-ENVTHG--QFAFTTTEAGNYMACFWLGSN 117 (183)
Q Consensus 74 ~v~~~V~dp~g~~v~~~-~~~~~g--~f~f~a~~~G~Y~~Cf~n~~~ 117 (183)
.+.+.|.+|+|+...-. .+...| ...|+..+.|.|++.+.....
T Consensus 35 ~v~~~v~~PsG~~~~~~v~d~~dgty~v~y~P~~~G~h~i~V~~~g~ 81 (188)
T 2k7p_A 35 EITGEVRMPSGKVAQPTITDNKDGTVTVRYAPSEAGLHEMDIRYDNM 81 (188)
T ss_dssp CEEEEEECTTSCEECCEEEECSSSEEEEEECCCCCEEEEEEEEETTE
T ss_pred eEEEEEECCCCCccccEEEeCCCCEEEEEEEccccEeEEEEEEECCE
Confidence 89999999999865322 222345 567888999999998887643
No 41
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=68.20 E-value=19 Score=24.27 Aligned_cols=69 Identities=17% Similarity=0.221 Sum_probs=45.4
Q ss_pred EEEcCCCcceeeeEcCCCcEEEEEEEEeeCCCCCCCCeeEEEEECC-CCCeEEeeeccceeeEEEEe--ccCcceEEEEE
Q 030061 37 LQIPSSGTKCVSEEINSNVVVLADYYVIDEAHPEHPPTVSAKVTSP-YGNNLHHNENVTHGQFAFTT--TEAGNYMACFW 113 (183)
Q Consensus 37 f~I~~g~~~Cf~e~v~~~~~v~~~y~v~~~~~~~~~~~v~~~V~dp-~g~~v~~~~~~~~g~f~f~a--~~~G~Y~~Cf~ 113 (183)
+.+.|-.++|-+-+ | .+.+.|.-. .|.++++|.|- .|+.||+.....-...++.- ..+|+|.+=+.
T Consensus 20 I~i~P~~~~~A~I~---n-vlsV~F~~~-------~~~vTItItNe~TG~~VYs~~~s~p~~i~IdLnge~sG~Y~IeI~ 88 (101)
T 3sd2_A 20 IPIQPTYEKCAILS---N-ILNVSFGRA-------KDYAIITVTNKATGEIVHSKTYHNTSIVMIDMSSCEKGEYTIHII 88 (101)
T ss_dssp CCCCCSSEEEEEET---T-EEEEEESSC-------CSCEEEEEEETTTCCEEEEEEESSCSEEEEECTTSCSEEEEEEEE
T ss_pred eeecccccccEEEe---C-EEEEEeccC-------CCcEEEEEEECCCCcEEEEEeccCCcEEEEEcCCCcCceEEEEEE
Confidence 33445555666543 3 677777322 24999999996 79999998554434455555 55899988887
Q ss_pred eCC
Q 030061 114 LGS 116 (183)
Q Consensus 114 n~~ 116 (183)
-..
T Consensus 89 ~~~ 91 (101)
T 3sd2_A 89 LND 91 (101)
T ss_dssp ETT
T ss_pred eCC
Confidence 664
No 42
>2d7o_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=67.70 E-value=21 Score=23.97 Aligned_cols=54 Identities=15% Similarity=0.230 Sum_probs=35.4
Q ss_pred eeEEEEECCCCCeEEeeecccee--eEEEEeccCcceEEEEEeCCCCCCCccEEEEE
Q 030061 74 TVSAKVTSPYGNNLHHNENVTHG--QFAFTTTEAGNYMACFWLGSNPQKVADATLGL 128 (183)
Q Consensus 74 ~v~~~V~dp~g~~v~~~~~~~~g--~f~f~a~~~G~Y~~Cf~n~~~~~~~~~~~V~f 128 (183)
.+.+.|.+|.+..+-- .+..+| ..+|+...+|.|.+.+.-...+-...+..|.+
T Consensus 43 ~l~v~v~gp~~~~~~v-~d~~dGty~V~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~v 98 (111)
T 2d7o_A 43 GLSLAVEGPSKAEITC-KDNKDGTCTVSYLPTAPGDYSIIVRFDDKHIPGSPFTAKI 98 (111)
T ss_dssp CBCCEEESSSCCCBCC-CCCSSSEEEEEECCSSCEEEEEECBBSSCBCTTCSEEEEE
T ss_pred cEEEEEECCCCceEEE-EECCCCEEEEEEEeCCCeEEEEEEEECCEECCCcCEEEEE
Confidence 7788889998644322 222355 56788899999999988655432345655544
No 43
>2di9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=66.08 E-value=30 Score=23.90 Aligned_cols=54 Identities=11% Similarity=0.228 Sum_probs=35.9
Q ss_pred eeEEEEECCCCCeEEeeecccee--eEEEEeccCcceEEEEEeCCCCCCCccEEEEE
Q 030061 74 TVSAKVTSPYGNNLHHNENVTHG--QFAFTTTEAGNYMACFWLGSNPQKVADATLGL 128 (183)
Q Consensus 74 ~v~~~V~dp~g~~v~~~~~~~~g--~f~f~a~~~G~Y~~Cf~n~~~~~~~~~~~V~f 128 (183)
.+.+.|.+|.+..+.-.+ ..+| ..+|+...+|.|.+.+.-...+-...+..|.+
T Consensus 63 ~l~v~v~gp~~~~~~v~d-~~dGty~v~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~V 118 (131)
T 2di9_A 63 GLGLTVEGPCEAKIECSD-NGDGTCSVSYLPTKPGEYFVNILFEEVHIPGSPFKADI 118 (131)
T ss_dssp CEEEEECSSSCCEEEEEE-CSSSEEEEEEECSSSSEEEEEEEESSCBCTTCSEEEEE
T ss_pred eeEEEEEecCCceEEEEE-CCCCEEEEEEEeCCCeeEEEEEEECCEECCCcCEEEEE
Confidence 788899999885442222 2345 66788899999999988665432335555543
No 44
>3jqw_A COLH protein, collagenase; beta-barrel, dual calcium site, cell adhesion; 2.00A {Clostridium histolyticum} SCOP: b.23.2.0 PDB: 3jqx_A
Probab=64.54 E-value=32 Score=23.70 Aligned_cols=70 Identities=11% Similarity=0.056 Sum_probs=49.8
Q ss_pred CCCcceeeeEcCCCcEEEEEEEEeeCCCCCCCCeeEEEEECCCCCeEEeeec-cceeeEEEEeccCcceEEEEEeCC
Q 030061 41 SSGTKCVSEEINSNVVVLADYYVIDEAHPEHPPTVSAKVTSPYGNNLHHNEN-VTHGQFAFTTTEAGNYMACFWLGS 116 (183)
Q Consensus 41 ~g~~~Cf~e~v~~~~~v~~~y~v~~~~~~~~~~~v~~~V~dp~g~~v~~~~~-~~~g~f~f~a~~~G~Y~~Cf~n~~ 116 (183)
+.....|.-++++...|.+++.-..+ . .+...+++.+++.+..... -..-.-.|.+.++|.|-+.++.-.
T Consensus 35 ~dd~D~y~F~V~~~g~v~I~l~~~~~-----~-~~~w~ly~~~~nyv~y~~~~gn~~~~~~~~~~pGkYYl~Vy~y~ 105 (121)
T 3jqw_A 35 TSDQDYFYFDVITPGEVKIDINKLGY-----G-GATWVVYDENNNAVSYATDDGQNLSGKFKADKPGRYYIHLYMFN 105 (121)
T ss_dssp TTCCEEEEEEESSCEEEEEEEEECSS-----S-EEEEEEECTTSCEEEECEECSSEEEEEEEECSCEEEEEEEEEEE
T ss_pred cCCeeEEEEEeCCCCeEEEEEEecCC-----C-cEEEEEEeCCCCeEEEeccCCCEEEEEEEeCCCeeEEEEEEEec
Confidence 44588899999988888888876532 3 8999999888766544332 122344567779999999999753
No 45
>2di8_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=64.01 E-value=30 Score=23.18 Aligned_cols=54 Identities=15% Similarity=0.274 Sum_probs=35.9
Q ss_pred eeEEEEECCCCCeEEeeecccee--eEEEEeccCcceEEEEEeCCCCCCCccEEEEE
Q 030061 74 TVSAKVTSPYGNNLHHNENVTHG--QFAFTTTEAGNYMACFWLGSNPQKVADATLGL 128 (183)
Q Consensus 74 ~v~~~V~dp~g~~v~~~~~~~~g--~f~f~a~~~G~Y~~Cf~n~~~~~~~~~~~V~f 128 (183)
.+.+.|.+|.+-.+.-.+ ..+| ..+|+...+|.|.+.+.-...+-...+..|.+
T Consensus 43 ~l~v~v~gp~~~~~~v~d-~~dGty~v~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~v 98 (111)
T 2di8_A 43 GISLAVEGPSKVDIQTED-LEDGTCKVSYFPTVPGVYIVSTKFADEHVPGSPFTVKI 98 (111)
T ss_dssp CEEEEEESSSCCCEECCB-CTTSCEEEEECCCSCSEEEEEEEESSCBCTTCSEEEEE
T ss_pred ceEEEEEcCCCceEEEEE-CCCCEEEEEEEeCCCeEEEEEEEECCEECCCCCEEEEE
Confidence 788889999874442222 2345 67788899999999888665432345555544
No 46
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=63.71 E-value=9.3 Score=24.89 Aligned_cols=17 Identities=24% Similarity=0.546 Sum_probs=14.5
Q ss_pred eeeEEEEeccCcceEE-E
Q 030061 95 HGQFAFTTTEAGNYMA-C 111 (183)
Q Consensus 95 ~g~f~f~a~~~G~Y~~-C 111 (183)
...+.|+..++|.|.+ |
T Consensus 68 ~~~~~~t~~~~G~Y~y~C 85 (100)
T 4hci_A 68 EKNITVKPKSAGTYELIC 85 (100)
T ss_dssp EEEEEECCCSCEEEEEEC
T ss_pred ceeEEEecccCceEEEEC
Confidence 5678899999999976 8
No 47
>2hr0_A Complement C3 beta chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2i07_A* 2wii_A* 2win_A* 2xwj_A* 3l3o_A* 3l5n_A* 3nms_A* 3nsa_A* 3ohx_A* 3t4a_A 2a74_A* 2a73_A* 2qki_A* 3g6j_A 2ice_A* 2icf_A* 2xwb_A*
Probab=62.82 E-value=74 Score=27.81 Aligned_cols=62 Identities=15% Similarity=0.284 Sum_probs=39.8
Q ss_pred CCcEEEEEEEEeeCCC-CCCCCeeEEEEECCCCCeEEeeecc---ceeeE--EEEe---ccCcceEEEEEeC
Q 030061 53 SNVVVLADYYVIDEAH-PEHPPTVSAKVTSPYGNNLHHNENV---THGQF--AFTT---TEAGNYMACFWLG 115 (183)
Q Consensus 53 ~~~~v~~~y~v~~~~~-~~~~~~v~~~V~dp~g~~v~~~~~~---~~g~f--~f~a---~~~G~Y~~Cf~n~ 115 (183)
.|+.|.+..-+.+... |... .+.+.|.||+|+.+.+..-. ..|-+ .|.. ...|.|++-+...
T Consensus 119 PGqtV~~r~i~~d~~~~p~~~-~v~v~l~dP~g~~i~~~~~~~~~~~G~~~~~f~Lp~~~~~G~w~I~v~~~ 189 (645)
T 2hr0_A 119 PGSTVLYRIFTVNHKLLPVGR-TVMVNIENPEGIPVKQDSLSSQNQLGVLPLSWDIPELVNMGQWKIRAYYE 189 (645)
T ss_dssp TTSEEEEEEEEECTTSCBCCC-EEEEEEECTTSCEEEEEEEECTTTTTEEEEEEECCSSCCCSEEEEEEEET
T ss_pred CCCEEEEEEEEECCCCcccCc-eEEEEEECCCCCEEEEEEeeccccCCeEEEEEECCCccccccEEEEEEEC
Confidence 3677776666655432 2234 78999999999998764222 23433 3333 2469999998864
No 48
>3hrz_A Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_A* 3hs0_A*
Probab=58.17 E-value=43 Score=29.57 Aligned_cols=61 Identities=15% Similarity=0.137 Sum_probs=34.6
Q ss_pred CcEEEEEEEEeeCC-CCCCCCeeEEEEECCCCCeEEeeeccc--eeeEEEEec-cCcceEEEEEeC
Q 030061 54 NVVVLADYYVIDEA-HPEHPPTVSAKVTSPYGNNLHHNENVT--HGQFAFTTT-EAGNYMACFWLG 115 (183)
Q Consensus 54 ~~~v~~~y~v~~~~-~~~~~~~v~~~V~dp~g~~v~~~~~~~--~g~f~f~a~-~~G~Y~~Cf~n~ 115 (183)
|+.|.+..-+.+.. .|.+. .+.+.|.||+|+.+..+.-.. .+.|..... ..|.|++.....
T Consensus 118 GqtV~~r~i~~d~~~~p~~~-~~~v~i~dP~g~~i~~~~~~~~~~~~f~Lp~~~~~G~w~i~v~~~ 182 (627)
T 3hrz_A 118 GSPVLYRVFSMDHNTSKMNK-TVIVEFQTPEGILVSSNSVDLNFFWPYNLPDLVSLGTWRIVAKYE 182 (627)
T ss_dssp TCEECEEEEESCC--------CEEEEEECTTCCEEEEEEEBTTBCCCEECCSSCCCEEEEEEEEET
T ss_pred CCEEEEEEEEECCCCcccCc-cEEEEEECCCCCEEEEEEeccceEEEEECCCCCCCeeEEEEEEEC
Confidence 56666555554432 12234 789999999999987533211 233333332 368888888754
No 49
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=57.68 E-value=28 Score=25.49 Aligned_cols=44 Identities=18% Similarity=0.304 Sum_probs=32.4
Q ss_pred eeEEEEECCCCCeEEee-ecccee--eEEEEeccCcceEEEEEeCCC
Q 030061 74 TVSAKVTSPYGNNLHHN-ENVTHG--QFAFTTTEAGNYMACFWLGSN 117 (183)
Q Consensus 74 ~v~~~V~dp~g~~v~~~-~~~~~g--~f~f~a~~~G~Y~~Cf~n~~~ 117 (183)
.+.+.|.+|+|+.+--. ....+| ...|+..+.|.|.+-+.....
T Consensus 32 ~l~v~v~~PsG~~~~~~v~~~~~g~y~v~ftP~~~G~~~i~V~~~g~ 78 (191)
T 2k7q_A 32 LLTATVVPPSGREEPCLLKRLRNGHVGISFVPKETGEHLVHVKKNGQ 78 (191)
T ss_dssp SEEEEEECTTSCCEECEEEECTTSCEEEECCCSSSEEEEEEEEETTE
T ss_pred cEEEEEECCCCCEEeeEEEECCCCEEEEEEEccCCEeEEEEEEECCE
Confidence 89999999999865332 222334 567999999999998887653
No 50
>2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A
Probab=55.57 E-value=62 Score=25.27 Aligned_cols=53 Identities=13% Similarity=0.240 Sum_probs=34.1
Q ss_pred eeEEEEECCCCCeEEeeecccee--eEEEEeccCcceEEEEEeCCCCCCCccEEEE
Q 030061 74 TVSAKVTSPYGNNLHHNENVTHG--QFAFTTTEAGNYMACFWLGSNPQKVADATLG 127 (183)
Q Consensus 74 ~v~~~V~dp~g~~v~~~~~~~~g--~f~f~a~~~G~Y~~Cf~n~~~~~~~~~~~V~ 127 (183)
.+.+.|.+|.+..+.-.+ ...| ..+|+..++|.|.+++.-...+-...+..|.
T Consensus 229 ~l~v~v~gp~~~~~~~~d-~~dGt~~v~y~p~~~G~y~i~V~~~~~~i~gSPf~v~ 283 (288)
T 2j3s_A 229 GLAIAVEGPSKAEISFED-RKDGSCGVAYVVQEPGDYEVSVKFNEEHIPDSPFVVP 283 (288)
T ss_dssp EEEEEEEESSCEEEEEEE-CTTSEEEEEEEESSCEEEEEEEEETTEECTTCSEEEE
T ss_pred ceEEEEeCCCCcceeEEE-CCCCEEEEEEEcCCCeeEEEEEEECCEECCCCCEEEE
Confidence 788889999764443222 2345 4588889999999998865442223444443
No 51
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=51.25 E-value=39 Score=33.45 Aligned_cols=62 Identities=15% Similarity=0.249 Sum_probs=39.2
Q ss_pred CcEEEEEEEEeeCC-CCCCCCeeEEEEECCCCCeEEeeecc-ceeeEE---EEe---ccCcceEEEEEeCC
Q 030061 54 NVVVLADYYVIDEA-HPEHPPTVSAKVTSPYGNNLHHNENV-THGQFA---FTT---TEAGNYMACFWLGS 116 (183)
Q Consensus 54 ~~~v~~~y~v~~~~-~~~~~~~v~~~V~dp~g~~v~~~~~~-~~g~f~---f~a---~~~G~Y~~Cf~n~~ 116 (183)
|+.|.+..-+.++. .|... .+.+.|.||+|+.+.++... ..|-++ |.. ...|.|++=+....
T Consensus 138 GqtV~~r~i~~d~~~~p~~~-~v~v~l~dP~G~~i~~~~~~~~~G~~~~~~f~Lp~~~~~G~w~I~v~~~~ 207 (1676)
T 3cu7_A 138 DQSVKVRVYSLNDDLKPAKR-ETVLTFIDPEGSEVDMVEEIDHIGIISFPDFKIPSNPRYGMWTIKAKYKE 207 (1676)
T ss_dssp TCEECEEEEEECTTCSCCCC-CEEEEEEETTTEECCCEEECCSSSEEECCCEECCSSCCCEEEEEEEEBSS
T ss_pred CCEEEEEEEEECCCCccccc-ceEEEEECCCCCEEEEEeeecCCCceecceeeCCCCccccceEEEEEecC
Confidence 55565555555433 23234 78999999999988765322 355544 233 34699999888653
No 52
>3gf8_A Putative polysaccharide binding proteins (DUF1812; NP_809975.1, joint center for structural genomics; HET: MSE; 2.20A {Bacteroides thetaiotaomicron vpi-5482}
Probab=50.97 E-value=16 Score=29.08 Aligned_cols=70 Identities=17% Similarity=0.229 Sum_probs=33.6
Q ss_pred e--eeeEcCC-CcEEEEEEEEeeCC--C-CCCCCeeEEEEECCCCCeEEeeecc--c--eeeEEEEe-ccCcceEE-EEE
Q 030061 46 C--VSEEINS-NVVVLADYYVIDEA--H-PEHPPTVSAKVTSPYGNNLHHNENV--T--HGQFAFTT-TEAGNYMA-CFW 113 (183)
Q Consensus 46 C--f~e~v~~-~~~v~~~y~v~~~~--~-~~~~~~v~~~V~dp~g~~v~~~~~~--~--~g~f~f~a-~~~G~Y~~-Cf~ 113 (183)
| ++|+.++ ...+.+.|.-.-.. . ++.-..|++.|+|.+|+.+.+.... . .+.+.... -..|.|++ |--
T Consensus 4 Cd~I~edl~dC~~~l~F~Ydyn~~~~d~f~~~V~~V~lyvFD~~G~~v~~~~~~~~~L~~~~y~m~l~Lp~G~Y~~VaWg 83 (296)
T 3gf8_A 4 CDSFNEDLPECRLSVKFKYDYNMEFADAFHAQVDKVELYVFDKNGKYLFKQAEEGSALSTGNYLMEVELPVGQYQFMAWA 83 (296)
T ss_dssp ---------CCCEEEEEECCCSTTCSCCHHHHCCEEEEEEECTTSBEEEEEEEESGGGGSSCCCEEECCCSEEEEEEEEE
T ss_pred CccCCcCccCCCCEEEEEEecCCCcccccccccCEEEEEEEcCCCCEEEEEecchhhcccCceEEEEecCCCcEEEEEEE
Confidence 7 7777765 33455554332111 0 1111299999999999988764322 1 34333333 33589988 444
Q ss_pred eC
Q 030061 114 LG 115 (183)
Q Consensus 114 n~ 115 (183)
|.
T Consensus 84 g~ 85 (296)
T 3gf8_A 84 GA 85 (296)
T ss_dssp SC
T ss_pred CC
Confidence 43
No 53
>2x5p_A FBA2, fibronectin binding protein; protein binding; 1.60A {Streptococcus pyogenes}
Probab=48.75 E-value=25 Score=24.27 Aligned_cols=55 Identities=9% Similarity=0.057 Sum_probs=37.4
Q ss_pred CeeEEEEECCCCCeEEeeeccceeeEEEEeccCcceEEEEEeCCCCCCCccEEEEEEE
Q 030061 73 PTVSAKVTSPYGNNLHHNENVTHGQFAFTTTEAGNYMACFWLGSNPQKVADATLGLDW 130 (183)
Q Consensus 73 ~~v~~~V~dp~g~~v~~~~~~~~g~f~f~a~~~G~Y~~Cf~n~~~~~~~~~~~V~f~i 130 (183)
+...|.+++.+|+.+.+.. +.|.+.|.--..|.|.+-=..... .......+.|.+
T Consensus 43 ~GA~F~l~~~~g~~v~~~~--sdG~~~~~~L~~G~Y~l~EtkAP~-GY~l~~~i~ftV 97 (121)
T 2x5p_A 43 AGATMELRDSSGKTISTWI--SDGQVKDFYLMPGKYTFVETAAPD-GYEVATAITFTV 97 (121)
T ss_dssp CCCEEEEECTTSCEEEEEE--CCSSCEEEEECSEEEEEEEEECCT-TCCCCCCEEEEE
T ss_pred CCCEEEEEECCCCEEEEEE--eCCEEEEcccCCcEEEEEEEeCCC-CcccCCCEEEEE
Confidence 4888999999999876543 478899988889999885543322 111124456655
No 54
>2xwx_A GBPA, glcnac-binding protein A; chitin-binding protein; 1.80A {Vibrio cholerae}
Probab=48.70 E-value=1.1e+02 Score=25.46 Aligned_cols=61 Identities=15% Similarity=0.118 Sum_probs=38.8
Q ss_pred CCcEEEEEEEEeeCCCCCCCCeeEEEEECCCCCeEEeee-ccceee-EEEEec----cCcceEEEEEeCCC
Q 030061 53 SNVVVLADYYVIDEAHPEHPPTVSAKVTSPYGNNLHHNE-NVTHGQ-FAFTTT----EAGNYMACFWLGSN 117 (183)
Q Consensus 53 ~~~~v~~~y~v~~~~~~~~~~~v~~~V~dp~g~~v~~~~-~~~~g~-f~f~a~----~~G~Y~~Cf~n~~~ 117 (183)
.+..+.+.|.+...+ +. .+.++|+|..|+.+.... ....+. .+|+.. +.|.|.+=......
T Consensus 309 ~~g~~~l~f~~~~~~---~~-~v~~~v~d~~~~~~~~~~~~v~~~~~~~~tl~ls~~~aGhh~lvv~~~~~ 375 (391)
T 2xwx_A 309 GEQPIQLDLTLEAQG---EM-SAELTVYNHHQKPLASWSQAMTDGELKSITLELSEAKAGHHMLVSRIKDR 375 (391)
T ss_dssp CSSCCEEEEEEEEES---SE-EEEEEEECTTSCEEEEEEEEECTTCEEEEEEECSCCCSEEEEEEEEEEET
T ss_pred cCCcEEEEEEEEecC---ce-EEEEEEEcCCCCccceeeEEEcCCCcceEEEEccCCCCccEEEEEEEECC
Confidence 344455555555322 23 999999999999876543 233333 556554 68999988887643
No 55
>4ank_A Transthyretin; hormone binding protein, thyroxine transport protein, hormon amyloidosis inhibition; 1.70A {Homo sapiens}
Probab=48.21 E-value=34 Score=24.53 Aligned_cols=57 Identities=14% Similarity=0.050 Sum_probs=30.6
Q ss_pred EEEEEeeCCCCC-CCCeeEEEEE--CCCCC--eEEeeeccceeeEEEE----eccCcceEEEEEeCC
Q 030061 59 ADYYVIDEAHPE-HPPTVSAKVT--SPYGN--NLHHNENVTHGQFAFT----TTEAGNYMACFWLGS 116 (183)
Q Consensus 59 ~~y~v~~~~~~~-~~~~v~~~V~--dp~g~--~v~~~~~~~~g~f~f~----a~~~G~Y~~Cf~n~~ 116 (183)
++-.|.+...+. .. +|.+.++ +++|. .+.+..-...|+..-- ....|.|++.|+-..
T Consensus 32 LTtHVLDt~~G~PA~-gv~V~L~~~~~~~~~~~l~~~~Td~DGR~~~ll~~~~~~~G~Y~L~F~tg~ 97 (147)
T 4ank_A 32 LMVKVLDAVRGSPAI-NVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDTKS 97 (147)
T ss_dssp EEEEEEETTTTEECC-SCEEEEEEECTTSCEEEEEEEECCTTSEECCSCCTTTCCSEEEEEEECHHH
T ss_pred eEEEEEeCCCCcCCC-CCEEEEEEECCCCCeEEEEEEEeCCCCCCCCCCCccccCCceEEEEEEHHH
Confidence 566676533210 12 5555554 45553 3544444456766421 134799999998653
No 56
>3pay_A Putative adhesin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, cell adhesion; 2.50A {Bacteroides ovatus}
Probab=48.13 E-value=16 Score=29.53 Aligned_cols=67 Identities=13% Similarity=0.064 Sum_probs=36.5
Q ss_pred eeeEcCC-CcEEEEEEEEeeCCC---CCCCCeeEEEEECCCCCeEEeeecc--c-eeeEEEEec---cCcceEEEEE
Q 030061 47 VSEEINS-NVVVLADYYVIDEAH---PEHPPTVSAKVTSPYGNNLHHNENV--T-HGQFAFTTT---EAGNYMACFW 113 (183)
Q Consensus 47 f~e~v~~-~~~v~~~y~v~~~~~---~~~~~~v~~~V~dp~g~~v~~~~~~--~-~g~f~f~a~---~~G~Y~~Cf~ 113 (183)
++|+.++ ...+.+.|....... ++....|++.|+|.+|+.+.+.... . .+.+..... .+|.|++=..
T Consensus 6 I~eDl~dC~~~L~F~Ydyn~~~~d~f~~~V~~v~lyvFD~~G~~v~~~~~~~~~L~~~~~m~l~~~l~~G~Y~~VaW 82 (314)
T 3pay_A 6 IREDLPRCELWLEFVFDYNMEYADAFNPQVKSVDVLVFDSDDKLLFTKSVKVAALVGGNRMSLTDELDFGSYKVLTV 82 (314)
T ss_dssp SCSSSCCCCEEEEEECCCSTTCSCCHHHHCCEEEEEEECTTSBEEEEEEEEGGGSBTTTEEECTTTCCSEEEEEEEE
T ss_pred cccCccCCCCeEEEEEecCCCcccchhcccCEEEEEEEcCCCCEEEEEecchhhccCCceEecCCcCCCCcEEEEEE
Confidence 6666654 235566653331110 1111299999999999988764322 1 112244443 3688877333
No 57
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=47.16 E-value=56 Score=22.49 Aligned_cols=19 Identities=26% Similarity=0.543 Sum_probs=14.3
Q ss_pred ceeeEEEEeccCcceEE-EE
Q 030061 94 THGQFAFTTTEAGNYMA-CF 112 (183)
Q Consensus 94 ~~g~f~f~a~~~G~Y~~-Cf 112 (183)
+...|+++-..+|.|.+ |-
T Consensus 62 pGet~s~TF~~pG~y~y~C~ 81 (127)
T 3tu6_A 62 INEEITVTLSKPGVYMYQCA 81 (127)
T ss_dssp TTCCCEEECCSCEEEEEECT
T ss_pred CCCEEEEEeCCCeEEEEEeC
Confidence 34467777789999976 76
No 58
>3arc_L Photosystem II reaction center protein L; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_L* 3a0b_L* 3a0h_L* 2axt_L* 3bz1_L* 3bz2_L* 3kzi_L* 3prq_L* 3prr_L*
Probab=44.66 E-value=17 Score=19.58 Aligned_cols=22 Identities=18% Similarity=0.404 Sum_probs=18.3
Q ss_pred ehhhhhhHHHHHHHHHHHhhhc
Q 030061 6 ISLDRATVLPLILLLCLACYIC 27 (183)
Q Consensus 6 ~~~~~~~~~~~~~~~c~~~~~~ 27 (183)
..+||+-+-.++|+++..++++
T Consensus 10 VELNRTSLy~GLLlifvlavlF 31 (37)
T 3arc_L 10 VELNRTSLYLGLLLILVLALLF 31 (37)
T ss_dssp BCCCHHHHHHHHHHHHHHHHHH
T ss_pred ceechhhHHHHHHHHHHHHHHh
Confidence 5689999999999999888654
No 59
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=44.25 E-value=53 Score=22.46 Aligned_cols=19 Identities=32% Similarity=0.595 Sum_probs=14.9
Q ss_pred ceeeEEEEeccCcceEE-EE
Q 030061 94 THGQFAFTTTEAGNYMA-CF 112 (183)
Q Consensus 94 ~~g~f~f~a~~~G~Y~~-Cf 112 (183)
+...|+++-..+|.|.+ |-
T Consensus 60 pg~t~s~TF~~pG~y~y~C~ 79 (123)
T 3erx_A 60 INESYTLTVTEPGLYGVKCT 79 (123)
T ss_dssp TTCCEEEEECSCEEEEEECG
T ss_pred CCCEEEEEeCCCeEEEEEeC
Confidence 34577777789999977 87
No 60
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=44.09 E-value=37 Score=18.22 Aligned_cols=28 Identities=14% Similarity=0.350 Sum_probs=20.0
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 030061 147 KIEGVELHLKRLEAQVQSIHENLLFLKH 174 (183)
Q Consensus 147 ~l~~le~~l~~l~~~l~~I~~eq~y~r~ 174 (183)
.+++++.++..|...-..+.++-..+|.
T Consensus 2 RMnQLE~KVEeLl~~~~~Le~eV~RLk~ 29 (36)
T 1kd8_B 2 KVKQLKAKVEELKSKLWHLKNKVARLKK 29 (36)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 4677777777777777777777666654
No 61
>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*
Probab=42.21 E-value=39 Score=17.93 Aligned_cols=27 Identities=15% Similarity=0.225 Sum_probs=20.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 030061 148 IEGVELHLKRLEAQVQSIHENLLFLKH 174 (183)
Q Consensus 148 l~~le~~l~~l~~~l~~I~~eq~y~r~ 174 (183)
++++|+++..|...-..+.+|-..++.
T Consensus 3 M~QLEdKVEeLl~~n~~Le~EV~RLk~ 29 (34)
T 1uo4_A 3 MKQIEDKGEEILSKLYHIENELARIKK 29 (34)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 567888888888888888877766653
No 62
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=42.06 E-value=1.4e+02 Score=29.61 Aligned_cols=61 Identities=16% Similarity=0.307 Sum_probs=37.0
Q ss_pred CcEEEEEEEEeeCC-CCCCCCeeEEEEECCCCCeEEeeecc---cee--eEEEEec---cCcceEEEEEeC
Q 030061 54 NVVVLADYYVIDEA-HPEHPPTVSAKVTSPYGNNLHHNENV---THG--QFAFTTT---EAGNYMACFWLG 115 (183)
Q Consensus 54 ~~~v~~~y~v~~~~-~~~~~~~v~~~V~dp~g~~v~~~~~~---~~g--~f~f~a~---~~G~Y~~Cf~n~ 115 (183)
|+.|.+..-+.+.. .|.+. .+.+.|.||+|+.+.+..-. ..| .+.|... ..|.|++=+...
T Consensus 141 GqtV~~r~i~~d~~~~p~~~-~v~v~l~dP~g~~i~~~~~~~t~~~G~~~~~f~Lp~~~~~G~w~I~v~~~ 210 (1661)
T 2b39_A 141 GSTVLYRVFTVDHKLLPVGQ-TVFITIETPDGIPVKRDSKSSQNQFGILTLSWNIPELVNMGVWKIKAYYE 210 (1661)
T ss_dssp TSEEEEEEEEECTTSCCCCC-CEEEEEEETTEEEEEEEEECTTTTTSCCEEEEECCSSCCCEEEEEEEEET
T ss_pred CCEEEEEEEEECCCCcccCc-eEEEEEECCCCCEEeeeeecccccCCeEeeeeeCCCCccccceEEEEEee
Confidence 45555554444432 23234 78999999999988764322 234 3344442 469999988754
No 63
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=41.56 E-value=45 Score=24.70 Aligned_cols=44 Identities=18% Similarity=0.313 Sum_probs=30.9
Q ss_pred eeEEEEECCCCCeEEee-ecccee--eEEEEeccCcceEEEEEeCCC
Q 030061 74 TVSAKVTSPYGNNLHHN-ENVTHG--QFAFTTTEAGNYMACFWLGSN 117 (183)
Q Consensus 74 ~v~~~V~dp~g~~v~~~-~~~~~g--~f~f~a~~~G~Y~~Cf~n~~~ 117 (183)
.+.+.|.+|+|..+.-. .+...| ...|+....|.|++-+.....
T Consensus 45 ~~~v~i~~p~g~~~~~~v~d~~dGty~v~y~p~~~G~~~i~V~~~g~ 91 (212)
T 1qfh_A 45 PFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLRGN 91 (212)
T ss_dssp CEEEEEECGGGCEECCEEEECSSSEEEEEECCCSSEEEEEEEEETTE
T ss_pred eEEEEEECCCCCEeeeEEEECCCcEEEEEEECcCcEEEEEEEEECCE
Confidence 79999999998654332 222344 556778899999998886543
No 64
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=40.87 E-value=41 Score=17.79 Aligned_cols=27 Identities=7% Similarity=0.197 Sum_probs=18.6
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 030061 147 KIEGVELHLKRLEAQVQSIHENLLFLK 173 (183)
Q Consensus 147 ~l~~le~~l~~l~~~l~~I~~eq~y~r 173 (183)
.++++|+++..|...-..+.+|-..+|
T Consensus 2 RMnQLEdKVEeLl~~~~~Le~EV~RLk 28 (34)
T 3c3f_A 2 RMXQIEXKLEXILSXLYHXENEXARIX 28 (34)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 456777777777777777777666554
No 65
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=40.61 E-value=2.3e+02 Score=27.68 Aligned_cols=61 Identities=20% Similarity=0.318 Sum_probs=35.4
Q ss_pred CcEEEEEEEEeeCC-CCCCCCee-EEEEECCCCCeEEeeecc--cee----eEEEEe-ccCcceEEEEEeC
Q 030061 54 NVVVLADYYVIDEA-HPEHPPTV-SAKVTSPYGNNLHHNENV--THG----QFAFTT-TEAGNYMACFWLG 115 (183)
Q Consensus 54 ~~~v~~~y~v~~~~-~~~~~~~v-~~~V~dp~g~~v~~~~~~--~~g----~f~f~a-~~~G~Y~~Cf~n~ 115 (183)
|+.|...--+.+.. .|... .+ .+.|.||+|+.|.++... ..| .|.... ...|.|++-....
T Consensus 118 gq~V~~rv~~~~~~~~p~~~-~~~~v~i~dp~g~~i~~~~~~~~~~G~~~~~f~L~~~~~~G~w~I~~~~~ 187 (1451)
T 4acq_A 118 GQTVKFRVVSMDENFHPLNE-LIPLVYIQDPKGNRIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQKK 187 (1451)
T ss_dssp TCEEEEEEEEECTTCCBCCC-EEEEEEEECTTSCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEECT
T ss_pred CCEEEEEEEEECCCCcCccC-ceeEEEEECCCCCEEEEeeeccCCCCeEEEEeECCCCCCceeEEEEEEec
Confidence 55555444444433 22223 44 689999999999775432 234 333322 3368999888765
No 66
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=39.05 E-value=62 Score=20.38 Aligned_cols=34 Identities=15% Similarity=0.241 Sum_probs=29.5
Q ss_pred hhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 030061 142 VAKKDKIEGVELHLKRLEAQVQSIHENLLFLKHR 175 (183)
Q Consensus 142 ~a~~~~l~~le~~l~~l~~~l~~I~~eq~y~r~R 175 (183)
.|-.+.++-|.++|..|.+....+..|-.++|.-
T Consensus 11 ~AVREEVevLKe~I~EL~e~~~qLE~EN~~Lk~~ 44 (78)
T 1dip_A 11 YAVREEVEILKEQIRELVEKNSQLERENTLLKTL 44 (78)
T ss_dssp GTCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4556789999999999999999999999998863
No 67
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=38.54 E-value=70 Score=25.11 Aligned_cols=44 Identities=18% Similarity=0.313 Sum_probs=31.3
Q ss_pred eeEEEEECCCCCeEEee-ecccee--eEEEEeccCcceEEEEEeCCC
Q 030061 74 TVSAKVTSPYGNNLHHN-ENVTHG--QFAFTTTEAGNYMACFWLGSN 117 (183)
Q Consensus 74 ~v~~~V~dp~g~~v~~~-~~~~~g--~f~f~a~~~G~Y~~Cf~n~~~ 117 (183)
.+.+.|.+|+|..+... .+...| ..+|+....|.|++++.-...
T Consensus 144 ~~~v~i~~p~g~~~~~~v~d~~dGty~v~y~p~~~G~y~i~V~~~g~ 190 (311)
T 1wlh_A 144 PFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLRGN 190 (311)
T ss_dssp CEEEEEECTTSCBCCCEEEEETTTEEEEEECCCSSEEEEEEEEETTE
T ss_pred cEEEEEECCCCCeeeEEEEECCCCEEEEEEECCCCEEEEEEEEECCE
Confidence 78999999998643221 122334 667888999999999986543
No 68
>2k8e_A UPF0339 protein YEGP; protein structure initiative (PSI), northeast structur genomics consortium (NESG), ontario centre for structural P (OCSP); NMR {Escherichia coli} SCOP: d.348.1.1 d.348.1.1
Probab=37.68 E-value=88 Score=21.81 Aligned_cols=62 Identities=10% Similarity=0.159 Sum_probs=42.9
Q ss_pred cCCCcEEEEEEEEeeCCCCCCCCeeEEEEECCCCCeEEeeec-----------------c-ceeeEEEEeccCcceEEEE
Q 030061 51 INSNVVVLADYYVIDEAHPEHPPTVSAKVTSPYGNNLHHNEN-----------------V-THGQFAFTTTEAGNYMACF 112 (183)
Q Consensus 51 v~~~~~v~~~y~v~~~~~~~~~~~v~~~V~dp~g~~v~~~~~-----------------~-~~g~f~f~a~~~G~Y~~Cf 112 (183)
..+|..+.+.|++.... +- ...+.++.++|++|.+.+. . ...+|.......|+|.|-+
T Consensus 11 ~~~~~~Mag~FEi~~~~---~G-~~rfrLka~NGeiI~sSe~Y~sk~~a~~gI~sVk~na~~a~~fE~~~~~~G~~~f~L 86 (130)
T 2k8e_A 11 FNQGVIMAGWFELSKSS---DN-QFRFVLKAGNGETILTSELYTSKTSAEKGIASVRSNSPQEERYEKKTASNGKFYFNL 86 (130)
T ss_dssp ---CCCCCCEEEEEECT---TC-CEEEEEECTTSCEEEECCCBSSHHHHHHHHHHHHHSSSCTTTEEEEEETTTEEEEEE
T ss_pred cCccceeeeeEEEEEcC---CC-CEEEEEEeCCCCEEEEcCCcCCHHHHHHHHHHHHhhccccchheeeeccCCCEEEEE
Confidence 34556667889997543 12 7999999999999875321 1 2457887788889998888
Q ss_pred EeCC
Q 030061 113 WLGS 116 (183)
Q Consensus 113 ~n~~ 116 (183)
...+
T Consensus 87 ka~N 90 (130)
T 2k8e_A 87 KAAN 90 (130)
T ss_dssp ECTT
T ss_pred EeCC
Confidence 8764
No 69
>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*
Probab=37.51 E-value=1.4e+02 Score=29.64 Aligned_cols=42 Identities=14% Similarity=0.124 Sum_probs=27.8
Q ss_pred eeEEEEECCCCCeEEeeeccc--eeeEEEEe-ccCcceEEEEEeC
Q 030061 74 TVSAKVTSPYGNNLHHNENVT--HGQFAFTT-TEAGNYMACFWLG 115 (183)
Q Consensus 74 ~v~~~V~dp~g~~v~~~~~~~--~g~f~f~a-~~~G~Y~~Cf~n~ 115 (183)
.+.+.|.||+|+.+.++.-.. .+.|.... ...|.|++.....
T Consensus 160 ~~~v~i~dP~g~~i~~~~~~~~~~~~f~L~~~~~~G~w~I~v~~~ 204 (1642)
T 3prx_B 160 TVIVEFQTPEGILVSSNSVDLNFFWPYNLPDLVSLGTWRIVAKYE 204 (1642)
T ss_dssp CEEEEEECSSCCEEEEEEECTTCCCEEECCSSCCCEEEEEEEEET
T ss_pred eEEEEEECCCCCEEEEEEecccceEEEEcCCCCCceeEEEEEEeC
Confidence 788999999999988754222 22333333 2358888888754
No 70
>2r5o_A Putative ATP binding component of ABC- transporter; immunoglobulin fold, carbohydrate binding, domain swapping, O antigen export; HET: PG4; 1.30A {Escherichia coli}
Probab=37.23 E-value=73 Score=23.14 Aligned_cols=40 Identities=13% Similarity=-0.123 Sum_probs=24.5
Q ss_pred cCCCcEEEEEEEEeeCCCCCCCCeeEEEEECCCCCeEEeee
Q 030061 51 INSNVVVLADYYVIDEAHPEHPPTVSAKVTSPYGNNLHHNE 91 (183)
Q Consensus 51 v~~~~~v~~~y~v~~~~~~~~~~~v~~~V~dp~g~~v~~~~ 91 (183)
+..|+.+.+.+.+.-... -..|.+.+.|+|..|..|+...
T Consensus 66 ~~~Ge~v~l~i~~~~~~~-i~~~v~G~~Ik~~~G~~I~g~n 105 (188)
T 2r5o_A 66 LTGNQQTDFLMKVVFEYD-FDCVVPGILIKTLDGLFLYGTN 105 (188)
T ss_dssp EETTCEEEEEEEEEESSC-EEEEEEEEEEEETTCCEEEEEE
T ss_pred EeCCCEEEEEEEEEECCc-CCccEEEEEEECCCCCEEEecC
Confidence 445565555555542110 0124889999999999988643
No 71
>3fn2_A Putative sensor histidine kinase domain; GUT microbiome, structural genomics protein structure initiative; HET: MSE; 1.90A {Clostridium symbiosum atcc 14940}
Probab=37.01 E-value=37 Score=22.85 Aligned_cols=39 Identities=18% Similarity=0.216 Sum_probs=28.2
Q ss_pred eEEEEECCCCCeEEeeeccceeeEEEEeccCcce---EEEEE
Q 030061 75 VSAKVTSPYGNNLHHNENVTHGQFAFTTTEAGNY---MACFW 113 (183)
Q Consensus 75 v~~~V~dp~g~~v~~~~~~~~g~f~f~a~~~G~Y---~~Cf~ 113 (183)
=.+.|+|..|.+|......+.+...+-+..+|.. ++||.
T Consensus 50 ~~lrI~D~~G~vi~~~~~~a~~~~~vLa~~g~n~lGW~Ley~ 91 (106)
T 3fn2_A 50 GYVRITDKDGQVITYEDGSVQDKTVFLTNEGANKLGWKLEFL 91 (106)
T ss_dssp CEEEEECTTSCBCSCCCSCSTTEEEEEEECSCCTTCCEEEEE
T ss_pred CcEEEEcCCCCEEecCCCCcCcceeehhhcCCCccceEEEEE
Confidence 3578999999998855555567778888777643 55554
No 72
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=36.55 E-value=2e+02 Score=24.62 Aligned_cols=43 Identities=14% Similarity=0.175 Sum_probs=33.0
Q ss_pred eeEEEEECCCCCeEEeeecc--ceeeEEEEeccCcceEEEEEeCC
Q 030061 74 TVSAKVTSPYGNNLHHNENV--THGQFAFTTTEAGNYMACFWLGS 116 (183)
Q Consensus 74 ~v~~~V~dp~g~~v~~~~~~--~~g~f~f~a~~~G~Y~~Cf~n~~ 116 (183)
++++.+++|+|..+...... ..-+..+.....|+|.+-+....
T Consensus 460 dldl~l~~p~G~~~~~~~~~~~~~E~v~~~~~~~G~y~i~V~~~~ 504 (539)
T 3afg_A 460 DLDLYLYDPNGNQVDYSYTAYYGFEKVGYYNPTAGTWTIKVVSYS 504 (539)
T ss_dssp EEEEEEECTTSCEEEEECCSSBSCEEEEEESCCSEEEEEEEEEEE
T ss_pred CeEEEEECCCCCEeeccccCCCceeEEEECCCCCEEEEEEEEecc
Confidence 99999999999987554322 12356788889999999988754
No 73
>2r2v_A GCN4 leucine zipper; coiled coils, anti-parallel tetramer, protein design, de novo protein; HET: CIT; 1.90A {Saccharomyces cerevisiae} SCOP: h.1.3.1
Probab=36.35 E-value=50 Score=17.50 Aligned_cols=27 Identities=15% Similarity=0.191 Sum_probs=18.1
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 030061 147 KIEGVELHLKRLEAQVQSIHENLLFLK 173 (183)
Q Consensus 147 ~l~~le~~l~~l~~~l~~I~~eq~y~r 173 (183)
.++++++++..+........+|-.-++
T Consensus 2 RMnQledKvEel~~~~~~l~nEv~Rl~ 28 (34)
T 2r2v_A 2 KLKQVADKLEEVASKLYHNANELARVA 28 (34)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 356777777777777777766665544
No 74
>2q0z_X Protein Pro2281; SEC63, SEC, NESG, HR1979, structural genomics, translocase, northeast structural genomics consortium, PSI-2; 2.00A {Homo sapiens} SCOP: a.289.1.1 b.1.18.22
Probab=35.78 E-value=1.6e+02 Score=23.41 Aligned_cols=96 Identities=11% Similarity=0.087 Sum_probs=54.5
Q ss_pred eeeeEEEEEcCCCcceeeeEcCCCcEEEEEEEEeeC-----CC-----CC-CCCeeEEEEECCCCCeEEeeecc-----c
Q 030061 31 VTEAIWLQIPSSGTKCVSEEINSNVVVLADYYVIDE-----AH-----PE-HPPTVSAKVTSPYGNNLHHNENV-----T 94 (183)
Q Consensus 31 ~~~al~f~I~~g~~~Cf~e~v~~~~~v~~~y~v~~~-----~~-----~~-~~~~v~~~V~dp~g~~v~~~~~~-----~ 94 (183)
+.-.+.+.+.+. +.+..++.+.+...+.-. .. |. ....--+.|-|++++.++.-+.. .
T Consensus 218 P~l~v~~~v~~~------~~i~~~~~~~l~v~l~~~~~~~~~v~aP~fp~~k~e~wwi~v~d~~~~~ll~~~r~~l~~~~ 291 (339)
T 2q0z_X 218 PNIELSYEVVDK------DSIRSGGPVVVLVQLEREEEVTGPVIAPLFPQKREEGWWVVIGDAKSNSLISIKRLTLQQKA 291 (339)
T ss_dssp CCEEEEEEETTG------GGCBTTSEEEEEEEEEECSSCCSSCCCTTCSSCCCCCEEEEEEETTTTEEEEEEEECCSSEE
T ss_pred CcEEEEEEEccC------ccccCCCcEEEEEEEEECCCCCCceeCCCCCCCCCCcEEEEEEECCCCEEEEEEEEecccce
Confidence 445667777652 235556666666655421 10 11 11256778889877665432211 2
Q ss_pred eeeEEEEeccCcceEEEEEeCC-CCCCCccEEEEEEEEEc
Q 030061 95 HGQFAFTTTEAGNYMACFWLGS-NPQKVADATLGLDWRIG 133 (183)
Q Consensus 95 ~g~f~f~a~~~G~Y~~Cf~n~~-~~~~~~~~~V~f~i~~g 133 (183)
.-+..|+++.+|.|.+.++--+ ++. +....+.+.+.+.
T Consensus 292 ~~~l~f~~P~~g~~~~~v~~vSD~yl-G~D~~~~i~~~v~ 330 (339)
T 2q0z_X 292 KVKLDFVAPATGAHNYTLYFMSDAYM-GCDQEYKFSVDVK 330 (339)
T ss_dssp EEEEEEECCSSEEEEEEEEEEESSCS-SCCEEEEEEEEEB
T ss_pred EEEEEEECCCCCCeeEEEEEEccccc-CcceEEEEEEEEe
Confidence 4578999998898877666533 333 3566666666654
No 75
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=35.52 E-value=47 Score=16.97 Aligned_cols=21 Identities=33% Similarity=0.419 Sum_probs=10.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHH
Q 030061 150 GVELHLKRLEAQVQSIHENLL 170 (183)
Q Consensus 150 ~le~~l~~l~~~l~~I~~eq~ 170 (183)
.+++.+++|...+++++...+
T Consensus 3 rlee~~r~l~~ivq~lq~r~d 23 (32)
T 2akf_A 3 RLEEDVRNLNAIVQKLQERLD 23 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHH
Confidence 455555555555555544433
No 76
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=34.97 E-value=1.1e+02 Score=21.05 Aligned_cols=66 Identities=15% Similarity=0.104 Sum_probs=40.1
Q ss_pred EcCCCcEEEEEEEEeeCCCCCCCCeeEEEEECCCCCeEEeeec-cc-----eeeEEEEeccCcceEEEEEeCCC
Q 030061 50 EINSNVVVLADYYVIDEAHPEHPPTVSAKVTSPYGNNLHHNEN-VT-----HGQFAFTTTEAGNYMACFWLGSN 117 (183)
Q Consensus 50 ~v~~~~~v~~~y~v~~~~~~~~~~~v~~~V~dp~g~~v~~~~~-~~-----~g~f~f~a~~~G~Y~~Cf~n~~~ 117 (183)
.+..|+.+.++..|..-|..+.. .+.+.++. +|..+.+... .. .-.|.+++...|.|.+...-...
T Consensus 28 ~v~~G~~~ti~vtV~N~G~~~a~-~~~V~lyv-ng~~v~t~~v~La~G~s~tv~f~~~~~~~G~~~v~AvVD~~ 99 (127)
T 3idu_A 28 VVGVNKLAEYEVHVKNLGGIGVP-STKVRVYI-NGTLYKNWTVSLGPKEEKVLTFNWTPTQEGMYRINATVDEE 99 (127)
T ss_dssp EECTTCCEEEEEEEEECSSSCEE-EEEEEEEE-TTEEEEEEEEEECTTCEEEEEEEECCSSCEEEEEEEEESTT
T ss_pred cccCCCEEEEEEEEEECCCCccC-CcEEEEEE-CCEEEeeEEeccCCCCeEEEEEEEEcCCCcEEEEEEEEcCC
Confidence 56678899999999854422222 55555554 5665544211 11 23566666778999998876543
No 77
>1jcd_A Major outer membrane lipoprotein; protein folding, coiled coil, helix capping, alanine-zipper, membrane protein; 1.30A {Escherichia coli} SCOP: h.1.16.1 PDB: 1eq7_A 1t8z_A* 2guv_A 2gus_A 1jcc_A 1kfn_A 1kfm_A
Probab=34.19 E-value=57 Score=19.05 Aligned_cols=25 Identities=4% Similarity=-0.013 Sum_probs=12.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHH
Q 030061 148 IEGVELHLKRLEAQVQSIHENLLFL 172 (183)
Q Consensus 148 l~~le~~l~~l~~~l~~I~~eq~y~ 172 (183)
++.|..++..|...++.+..+...+
T Consensus 6 i~~Lss~V~~L~~kVdqLssdV~al 30 (52)
T 1jcd_A 6 ADQASSDAQTANAKADQASNDANAA 30 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555555555555555444443
No 78
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=32.87 E-value=58 Score=17.23 Aligned_cols=27 Identities=19% Similarity=0.306 Sum_probs=17.6
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 030061 147 KIEGVELHLKRLEAQVQSIHENLLFLK 173 (183)
Q Consensus 147 ~l~~le~~l~~l~~~l~~I~~eq~y~r 173 (183)
.++++|+++..|...=..+.+|-..+|
T Consensus 2 RMnQLEdKvEeLl~~~~~L~~EV~RLk 28 (34)
T 2bni_A 2 RMKQIEDKLEEILSKGHHICNELARIK 28 (34)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHccHHHHHHHHHHH
Confidence 356777777777776666666665554
No 79
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=32.78 E-value=60 Score=17.38 Aligned_cols=27 Identities=15% Similarity=0.369 Sum_probs=17.8
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 030061 147 KIEGVELHLKRLEAQVQSIHENLLFLK 173 (183)
Q Consensus 147 ~l~~le~~l~~l~~~l~~I~~eq~y~r 173 (183)
.+++++.++..|...-..+.++-..++
T Consensus 2 RMnQLE~kVEeLl~~~~~Le~EV~RL~ 28 (36)
T 1kd8_A 2 EVKQLEAEVEEIESEVWHLENEVARLE 28 (36)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 356777777777777666666655554
No 80
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=31.90 E-value=58 Score=19.65 Aligned_cols=31 Identities=16% Similarity=0.246 Sum_probs=24.6
Q ss_pred hccChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 030061 144 KKDKIEGVELHLKRLEAQVQSIHENLLFLKH 174 (183)
Q Consensus 144 ~~~~l~~le~~l~~l~~~l~~I~~eq~y~r~ 174 (183)
+.++++.|+.++..|...-..+..+...++.
T Consensus 28 K~~~~~~Le~~v~~L~~eN~~L~~ev~~Lr~ 58 (63)
T 2dgc_A 28 KLQRMKQLEDKVEELLSKNYHLENEVARLKK 58 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4578888999998888888888877777664
No 81
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=31.46 E-value=62 Score=22.91 Aligned_cols=18 Identities=28% Similarity=0.565 Sum_probs=13.6
Q ss_pred eeeEEEEeccCcceEE-EEE
Q 030061 95 HGQFAFTTTEAGNYMA-CFW 113 (183)
Q Consensus 95 ~g~f~f~a~~~G~Y~~-Cf~ 113 (183)
...+.|++ .+|.|.+ |-.
T Consensus 121 t~t~tft~-~pGtY~y~C~~ 139 (154)
T 2cal_A 121 YTDFTWHP-TAGTYYYVCQI 139 (154)
T ss_dssp EEEEEECC-CSEEEEEECCS
T ss_pred EEEEEEEE-CCceEEEECCC
Confidence 45678888 9999976 743
No 82
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=30.84 E-value=28 Score=21.72 Aligned_cols=34 Identities=18% Similarity=0.198 Sum_probs=25.9
Q ss_pred hhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 030061 143 AKKDKIEGVELHLKRLEAQVQSIHENLLFLKHRS 176 (183)
Q Consensus 143 a~~~~l~~le~~l~~l~~~l~~I~~eq~y~r~RE 176 (183)
.++.++..|+.++..++.....+..+-..++..-
T Consensus 26 RK~~~i~~LE~~v~~le~~~~~l~~en~~Lr~~i 59 (70)
T 1gd2_E 26 RKEDHLKALETQVVTLKELHSSTTLENDQLRQKV 59 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567899999999999888877777766666543
No 83
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=30.13 E-value=1.8e+02 Score=23.39 Aligned_cols=72 Identities=19% Similarity=0.185 Sum_probs=39.7
Q ss_pred eeEEEEEcCCCcceeeeEcCCCcEEEEEEEEeeC-CCCCCCCeeEEEEECCCCCeEEe--------e-ecc--ceeeEEE
Q 030061 33 EAIWLQIPSSGTKCVSEEINSNVVVLADYYVIDE-AHPEHPPTVSAKVTSPYGNNLHH--------N-ENV--THGQFAF 100 (183)
Q Consensus 33 ~al~f~I~~g~~~Cf~e~v~~~~~v~~~y~v~~~-~~~~~~~~v~~~V~dp~g~~v~~--------~-~~~--~~g~f~f 100 (183)
.++++++.+.+=.=-++.-..+ ..+.+. ..|-+. .|++.+.+.+ ++++ + +.. ...++.|
T Consensus 125 ~~ltIkVig~QW~W~f~Ypd~~------i~t~n~l~lP~g~-~V~~~lTS~D--ViHsf~IP~lg~k~DaiPGr~n~~~~ 195 (315)
T 1fft_B 125 KPITIEVVSMDWKWFFIYPEQG------IATVNEIAFPANT-PVYFKVTSNS--VMNSFFIPRLGSQIYAMAGMQTRLHL 195 (315)
T ss_dssp CCCEEEEECCTTSCEEECTTTC------CEEESBCCCCSSS-EEEEEECBSS--SCEEEEEGGGTEEEEECBTSCEEEEE
T ss_pred CceeEEEeeeeccEEEecCCCc------ccccceEEEeCCC-EEEEEEEeCC--ccceeeecccCcEEeecCCcceeeEE
Confidence 3577777776544333433222 112111 123344 8888887653 3443 1 112 2578899
Q ss_pred EeccCcceEE-EEE
Q 030061 101 TTTEAGNYMA-CFW 113 (183)
Q Consensus 101 ~a~~~G~Y~~-Cf~ 113 (183)
++.++|.|.. |-.
T Consensus 196 ~~~~~G~y~g~CsE 209 (315)
T 1fft_B 196 IANEPGTYDGISAS 209 (315)
T ss_dssp ECCSCBCCEEBCCS
T ss_pred ecCCCeEEEEeccc
Confidence 9999999974 643
No 84
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=29.68 E-value=66 Score=16.88 Aligned_cols=26 Identities=4% Similarity=0.054 Sum_probs=16.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHH
Q 030061 148 IEGVELHLKRLEAQVQSIHENLLFLK 173 (183)
Q Consensus 148 l~~le~~l~~l~~~l~~I~~eq~y~r 173 (183)
++++|+++..+...-..+.+|-.-++
T Consensus 2 MnQLEdKVEell~~~~~le~EV~Rl~ 27 (33)
T 2wq1_A 2 MKQLEDKIEENTSKIYHNTNEIARNT 27 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 45677777777666666666655444
No 85
>3m86_A Amoebiasin-2; cysteine protease inhibitor, protease, protein binding; HET: 1PE; 1.65A {Entamoeba histolytica} PDB: 3m88_A
Probab=28.05 E-value=1.3e+02 Score=19.93 Aligned_cols=37 Identities=11% Similarity=0.003 Sum_probs=27.9
Q ss_pred eeEEEEeccCcceEEEEEeCCCCCC--CccEEEEEEEEE
Q 030061 96 GQFAFTTTEAGNYMACFWLGSNPQK--VADATLGLDWRI 132 (183)
Q Consensus 96 g~f~f~a~~~G~Y~~Cf~n~~~~~~--~~~~~V~f~i~~ 132 (183)
-.|.|.+..+|++++=|.-..+|.. ...+++.+.+.+
T Consensus 72 ~~~~f~a~~~G~~~i~~~Y~RpWe~~~~~~~tf~~~V~V 110 (111)
T 3m86_A 72 REIQLKPLKVGTTTIKLGYSRPWEKGKEPLRSLTYSVVI 110 (111)
T ss_dssp EEEEEEESSCEEEEEEEEEECTTCCSCCCSEEEEEEEEE
T ss_pred EEEEEEEeCCeEEEEEEEEECccCCCCCcccEEEEEEEE
Confidence 3788999999999999998877743 345777666643
No 86
>2pnv_A Small conductance calcium-activated potassium channel protein 2; leucine zipper, SKCA channel, membrane protein; 2.10A {Rattus norvegicus}
Probab=27.81 E-value=85 Score=17.54 Aligned_cols=22 Identities=18% Similarity=0.353 Sum_probs=15.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHH
Q 030061 148 IEGVELHLKRLEAQVQSIHENL 169 (183)
Q Consensus 148 l~~le~~l~~l~~~l~~I~~eq 169 (183)
-+.+|.+|..|+..|+.+....
T Consensus 18 ~e~LE~Ri~~LE~KLd~L~~~l 39 (43)
T 2pnv_A 18 SEDFEKRIVTLETKLETLIGSI 39 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHH
Confidence 3567777777777777776654
No 87
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=27.26 E-value=75 Score=16.71 Aligned_cols=26 Identities=15% Similarity=0.247 Sum_probs=17.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHH
Q 030061 148 IEGVELHLKRLEAQVQSIHENLLFLK 173 (183)
Q Consensus 148 l~~le~~l~~l~~~l~~I~~eq~y~r 173 (183)
++++|.++..|...-..+.+|-.-++
T Consensus 2 M~QLE~kVEeLl~~n~~Le~EV~RLk 27 (33)
T 3m48_A 2 MAQLEAKVEELLSKNWNLENEVARLK 27 (33)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 46677777777777777777666554
No 88
>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1
Probab=27.24 E-value=75 Score=18.56 Aligned_cols=31 Identities=32% Similarity=0.393 Sum_probs=22.6
Q ss_pred hhccChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 030061 143 AKKDKIEGVELHLKRLEAQVQSIHENLLFLK 173 (183)
Q Consensus 143 a~~~~l~~le~~l~~l~~~l~~I~~eq~y~r 173 (183)
.++.+++.|+.++..|...-..+..+..-++
T Consensus 19 RKk~~~~~LE~~v~~L~~eN~~L~~~~~~L~ 49 (55)
T 1dh3_A 19 KKKEYVKSLENRVAVLENQNKTLIEELKALK 49 (55)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3457788888888888877777777666554
No 89
>1jdm_A Sarcolipin; helix, membrane protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=26.76 E-value=54 Score=16.72 Aligned_cols=16 Identities=31% Similarity=0.438 Sum_probs=9.7
Q ss_pred hhhhhHHHHHHHHHHH
Q 030061 8 LDRATVLPLILLLCLA 23 (183)
Q Consensus 8 ~~~~~~~~~~~~~c~~ 23 (183)
+|-+++|.-++|+|+.
T Consensus 10 ~NFt~vLI~vlLi~ll 25 (31)
T 1jdm_A 10 LNFTIVLITVILMWLL 25 (31)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4555666666666664
No 90
>2er8_A Regulatory protein Leu3; Zn(2)Cys(6) binuclear cluster motif, transcription activator/DNA complex; 2.85A {Saccharomyces cerevisiae} PDB: 2ere_A 2erg_A
Probab=26.53 E-value=18 Score=21.99 Aligned_cols=24 Identities=17% Similarity=0.391 Sum_probs=15.3
Q ss_pred ccChhhHHHHHHHHHHHHHHHHHH
Q 030061 145 KDKIEGVELHLKRLEAQVQSIHEN 168 (183)
Q Consensus 145 ~~~l~~le~~l~~l~~~l~~I~~e 168 (183)
...++.|+.+|..|+..|..+..+
T Consensus 48 ~~~~~~Le~ri~~Le~~l~~l~~~ 71 (72)
T 2er8_A 48 RARNEAIEKRFKELTRTLTNLTSD 71 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC
Confidence 355677788888888877765543
No 91
>3im1_A Protein SNU246, PRE-mRNA-splicing helicase BRR2; ATPase, RNA helicase, rnpase, RNA unwindase, molecular model mRNA splicing; 1.65A {Saccharomyces cerevisiae} PDB: 3im2_A* 3hib_A
Probab=26.02 E-value=1.9e+02 Score=22.90 Aligned_cols=95 Identities=13% Similarity=0.128 Sum_probs=54.2
Q ss_pred eeeeEEEEEcCCCcceeeeEcCCCcEEEEEEEEeeCCC-----------CCC-CCeeEEEEECCCCCeEEe-ee-----c
Q 030061 31 VTEAIWLQIPSSGTKCVSEEINSNVVVLADYYVIDEAH-----------PEH-PPTVSAKVTSPYGNNLHH-NE-----N 92 (183)
Q Consensus 31 ~~~al~f~I~~g~~~Cf~e~v~~~~~v~~~y~v~~~~~-----------~~~-~~~v~~~V~dp~g~~v~~-~~-----~ 92 (183)
+.-.+.+.+.+. +.+..++.+.+...+..... |.. .+.-=+.|-|+..+.++. +. .
T Consensus 214 P~l~v~~~v~~~------~~i~~~~~~~l~v~l~~~~~~~~~~~~ap~fp~~k~e~ww~~v~d~~~~~l~~~kr~~~~~~ 287 (328)
T 3im1_A 214 PNVELTYSLNNS------DSLISGVKQKITIQLTRDVEPENLQVTSEKYPFDKLESWWLVLGEVSKKELYAIKKVTLNKE 287 (328)
T ss_dssp CCEEEEEEETTG------GGCCTTSEEEEEEEEEESSCCSCCBCCCSSCCBCCBCCEEEEEEEGGGTEEEEEEEECCCSS
T ss_pred CCEEEEEEecCC------CcccCCCeEEEEEEEEECCCCCCCcEECCCCCCCccCCEEEEEEECCCCeEEEEeeeccccc
Confidence 445567777642 24667777777766652111 110 115566777876555433 11 1
Q ss_pred cceeeEEEEeccCcceEEEEEeC-CCCCCCccEEEEEEEEE
Q 030061 93 VTHGQFAFTTTEAGNYMACFWLG-SNPQKVADATLGLDWRI 132 (183)
Q Consensus 93 ~~~g~f~f~a~~~G~Y~~Cf~n~-~~~~~~~~~~V~f~i~~ 132 (183)
...-++.|.++.+|.|++.++.- +++. +....+.+.+++
T Consensus 288 ~~~~~~~f~~p~~g~~~~~v~~vsD~yl-G~d~~~~~~l~V 327 (328)
T 3im1_A 288 TQQYELEFDTPTSGKHNLTIWCVCDSYL-DADKELSFEINV 327 (328)
T ss_dssp EEEEEEEEECCCSEEEEEEEEEEESSCS-SCCEEEEEEEEE
T ss_pred ceEEEEEEEcCCCCcEEEEEEEEecCCc-ceeEEEEEEEEe
Confidence 23567888888889887765543 3333 356677666654
No 92
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=25.93 E-value=1.1e+02 Score=22.21 Aligned_cols=19 Identities=16% Similarity=0.558 Sum_probs=13.3
Q ss_pred eeeEEEEec--cCcceEE-EEE
Q 030061 95 HGQFAFTTT--EAGNYMA-CFW 113 (183)
Q Consensus 95 ~g~f~f~a~--~~G~Y~~-Cf~ 113 (183)
...+.|++. ..|+|.| |-.
T Consensus 131 t~svtf~~~~lkpG~Y~f~Ct~ 152 (167)
T 3ay2_A 131 ESSLTLDPAKLADGDYKFACTF 152 (167)
T ss_dssp EEEEEECGGGGTTSCEEEECCS
T ss_pred EEEEEEecCCCCCcEEEEEcCC
Confidence 456677766 7999976 643
No 93
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=25.64 E-value=1.6e+02 Score=19.88 Aligned_cols=18 Identities=28% Similarity=0.770 Sum_probs=13.7
Q ss_pred eeeEEEEeccCcceEE-EE
Q 030061 95 HGQFAFTTTEAGNYMA-CF 112 (183)
Q Consensus 95 ~g~f~f~a~~~G~Y~~-Cf 112 (183)
...++++-..+|.|.+ |-
T Consensus 61 G~t~~~tF~~~G~y~y~C~ 79 (123)
T 1paz_A 61 NENYVLTVTQPGAYLVKCT 79 (123)
T ss_dssp TCCEEEECCSCEEEEEECT
T ss_pred CCEEEEEeCCCEEEEEEeC
Confidence 3467777789999987 84
No 94
>1gu3_A Endoglucanase C; carbohydrate-binding module, carbohydrate binding module, CBM, cellulose; HET: BGC; 2.3A {Cellulomonas fimi} SCOP: b.18.1.14 PDB: 1ulo_A 1ulp_A
Probab=25.52 E-value=60 Score=22.97 Aligned_cols=47 Identities=19% Similarity=0.198 Sum_probs=29.8
Q ss_pred eeEEEEEcCCC----cceeeeE--cCCCcEEEEEEEEeeCCCCCCCCeeEEEEECCC
Q 030061 33 EAIWLQIPSSG----TKCVSEE--INSNVVVLADYYVIDEAHPEHPPTVSAKVTSPY 83 (183)
Q Consensus 33 ~al~f~I~~g~----~~Cf~e~--v~~~~~v~~~y~v~~~~~~~~~~~v~~~V~dp~ 83 (183)
..+.+.|+.|. ....+.. +.+|..-.++|.+.... .. .|.+.|-.+.
T Consensus 30 g~l~i~i~~G~~~w~vql~q~gi~L~~G~tY~lsF~A~as~---~r-~i~v~i~~~~ 82 (149)
T 1gu3_A 30 GALCVAVPAGSAQYGVGVVLNGVAIEEGTTYTLRYTATAST---DV-TVRALVGQNG 82 (149)
T ss_dssp SSEEEEECTTCCTTSSEEEEEEECBCTTCEEEEEEEEEESS---CE-ECEEEEEESS
T ss_pred CEEEEEECCCCcCEEEEEEeCCEEEcCCCEEEEEEEEEeCC---Cc-EEEEEEecCC
Confidence 35677786643 4444444 45799999999998432 22 7777776543
No 95
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=23.34 E-value=4.9e+02 Score=24.83 Aligned_cols=63 Identities=16% Similarity=0.170 Sum_probs=38.5
Q ss_pred CCcEEEEEEEEeeCCC-CCCC-CeeEEEEECCCCCeEEeeecc--ceeeE--EEEe---ccCcceEEEEEeC
Q 030061 53 SNVVVLADYYVIDEAH-PEHP-PTVSAKVTSPYGNNLHHNENV--THGQF--AFTT---TEAGNYMACFWLG 115 (183)
Q Consensus 53 ~~~~v~~~y~v~~~~~-~~~~-~~v~~~V~dp~g~~v~~~~~~--~~g~f--~f~a---~~~G~Y~~Cf~n~ 115 (183)
.|+.|.+.--+.+... |... ..+.+.|.||+|+.+.++... ..|.+ .|.. ...|.|++=....
T Consensus 113 PGqtV~~r~~~~~~~~~p~~~~~~v~v~l~dp~g~~i~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~I~~~~~ 184 (1325)
T 2pn5_A 113 PGDTVNFRVIVLDTELKPPARVKSVYVTIRDPQRNVIRKWSTAKLYAGVFESDLQIAPTPMLGVWNISVEVE 184 (1325)
T ss_dssp TTCEEEEEEEEEETTSSCCSSCCEEEEEEECTTCCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEEET
T ss_pred CCCEEEEEEEEecCCccccccCccEEEEEECCCCCEEEEEecccCCCCeEecceECCCCccccceEEEEEeC
Confidence 3666666655554432 2111 158999999999998776442 23433 3333 2469999988764
No 96
>2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A
Probab=23.05 E-value=2.6e+02 Score=21.53 Aligned_cols=42 Identities=19% Similarity=0.459 Sum_probs=30.3
Q ss_pred eeEEEEECCCCCeEEeeecccee--eEEEEeccCcceEEEEEeCC
Q 030061 74 TVSAKVTSPYGNNLHHNENVTHG--QFAFTTTEAGNYMACFWLGS 116 (183)
Q Consensus 74 ~v~~~V~dp~g~~v~~~~~~~~g--~f~f~a~~~G~Y~~Cf~n~~ 116 (183)
.+.+.|.+|.+-.+.-.+ ...| ..+|+...+|.|.+-+.-..
T Consensus 38 ~l~v~i~~p~~~~~~~~d-~~dGty~v~y~p~~~G~y~i~V~~~g 81 (288)
T 2j3s_A 38 GLSLSIEGPSKVDINTED-LEDGTCRVTYCPTEPGNYIINIKFAD 81 (288)
T ss_dssp CEEEEEESSSCCEEEEEE-CTTSEEEEEEECSSCEEEEEEEEETT
T ss_pred cEEEEEECCCCceeEEEE-CCCCEEEEEEECCCCeEEEEEEEECC
Confidence 788888999875543333 2344 66888999999999887654
No 97
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=22.96 E-value=1.5e+02 Score=18.55 Aligned_cols=36 Identities=11% Similarity=0.250 Sum_probs=23.9
Q ss_pred cChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 030061 146 DKIEGVELHLKRLEAQVQSIHENLLFLKHRSSLFLP 181 (183)
Q Consensus 146 ~~l~~le~~l~~l~~~l~~I~~eq~y~r~RE~r~r~ 181 (183)
+.+..-+..|+.++..|++-..+...++..-.++|.
T Consensus 33 eELr~kd~~I~eLEk~L~ekd~eI~~LqseLDKfrS 68 (72)
T 3nmd_A 33 EELRQRDALIDELELELDQKDELIQMLQNELDKYRS 68 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 445566666777777777777777777766666654
No 98
>2c34_A ICP, inhibitor of cysteine peptidases; chagasin, immunoglobulin fold; NMR {Leishmania mexicana} SCOP: b.1.26.1
Probab=22.46 E-value=1.6e+02 Score=19.76 Aligned_cols=38 Identities=5% Similarity=-0.060 Sum_probs=27.3
Q ss_pred eeeEEEEeccCcceEEEEEeCCCCCC--CccEEEEEEEEE
Q 030061 95 HGQFAFTTTEAGNYMACFWLGSNPQK--VADATLGLDWRI 132 (183)
Q Consensus 95 ~g~f~f~a~~~G~Y~~Cf~n~~~~~~--~~~~~V~f~i~~ 132 (183)
.-.|.|.+..+|+.++=|....+|.+ ...+++.+.+.+
T Consensus 76 ~~~~~f~a~~~G~~~i~~~Y~R~We~~~~~~~~f~~~V~V 115 (116)
T 2c34_A 76 IYVVLVKPRKRGHHTLELVYTRPFEGIKPENERYTLHLNV 115 (116)
T ss_dssp EEEEEEEECSSSSEEEEEEEEBTTTBCCTTSCEEEEEEEE
T ss_pred eEEEEEEEeCCceEEEEEEEECccCCCCCccEEEEEEEEE
Confidence 34789999999999999988766642 244666666544
No 99
>3hfe_A Potassium voltage-gated channel subfamily KQT MEM; trimer, atrial fibrillation, cell membrane, cytoplasmic VESI deafness, disease mutation; 1.70A {Homo sapiens} PDB: 3hfc_A
Probab=22.39 E-value=92 Score=16.06 Aligned_cols=18 Identities=22% Similarity=0.394 Sum_probs=11.9
Q ss_pred hhhHHHHHHHHHHHHHHH
Q 030061 148 IEGVELHLKRLEAQVQSI 165 (183)
Q Consensus 148 l~~le~~l~~l~~~l~~I 165 (183)
+..+|.++..+...|+.|
T Consensus 12 LnRvE~k~t~MD~kL~~i 29 (31)
T 3hfe_A 12 LNRVEDKVTQLDQRLALI 29 (31)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 566677777776666654
No 100
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=22.35 E-value=97 Score=16.33 Aligned_cols=27 Identities=15% Similarity=0.267 Sum_probs=16.0
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 030061 147 KIEGVELHLKRLEAQVQSIHENLLFLK 173 (183)
Q Consensus 147 ~l~~le~~l~~l~~~l~~I~~eq~y~r 173 (183)
.+.+++.++..|...=+++.++-.-+|
T Consensus 2 RMnQLE~kVEeLl~~n~~Le~eV~rLk 28 (34)
T 2oxj_A 2 RMXQLEXKVXELLXKNXHLEXEVXRLK 28 (34)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 355666666666666666665555444
No 101
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=22.08 E-value=2e+02 Score=19.77 Aligned_cols=17 Identities=24% Similarity=0.536 Sum_probs=14.7
Q ss_pred eeEEEEeccCcceEE-EE
Q 030061 96 GQFAFTTTEAGNYMA-CF 112 (183)
Q Consensus 96 g~f~f~a~~~G~Y~~-Cf 112 (183)
+++.|++.++|.|.+ |-
T Consensus 100 ~~~~~~~~~~G~y~~~C~ 117 (135)
T 2cua_A 100 STVRYTFKRPGEYRIICN 117 (135)
T ss_dssp EEEEEECCSCEEEEEECC
T ss_pred EEEEEEcCCCEEEEEECc
Confidence 689999999999976 74
No 102
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=21.99 E-value=98 Score=16.21 Aligned_cols=26 Identities=15% Similarity=0.298 Sum_probs=15.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHH
Q 030061 148 IEGVELHLKRLEAQVQSIHENLLFLK 173 (183)
Q Consensus 148 l~~le~~l~~l~~~l~~I~~eq~y~r 173 (183)
++++|+++..|...=..+.+|-.-+|
T Consensus 2 MnQLEdKvEeLl~~~~~Le~EV~RLk 27 (33)
T 3c3g_A 2 MKXIEXKLXEIXSKXYHXENXLARIK 27 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 45666666666666666666555444
No 103
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=21.90 E-value=1.9e+02 Score=19.46 Aligned_cols=18 Identities=17% Similarity=0.222 Sum_probs=13.4
Q ss_pred eeeEEEEeccCcceEE-EE
Q 030061 95 HGQFAFTTTEAGNYMA-CF 112 (183)
Q Consensus 95 ~g~f~f~a~~~G~Y~~-Cf 112 (183)
...++++-..+|.|.+ |-
T Consensus 61 G~t~~~tF~~~G~y~y~C~ 79 (123)
T 1pmy_A 61 GQEAVVKFDKEGVYGFKCA 79 (123)
T ss_dssp TSCEEEECCSCEEEEEECS
T ss_pred CCEEEEEeCCCeEEEEEeC
Confidence 3467777789999977 74
No 104
>2jp3_A FXYD domain-containing ION transport regulator 4; protein, transcription; NMR {Rattus norvegicus}
Probab=21.82 E-value=56 Score=20.14 Aligned_cols=21 Identities=24% Similarity=0.199 Sum_probs=14.0
Q ss_pred hhhHHHHHHHHHHHhhhcccc
Q 030061 10 RATVLPLILLLCLACYICVVP 30 (183)
Q Consensus 10 ~~~~~~~~~~~c~~~~~~~~~ 30 (183)
|.+-|.++.+||+..|+.+++
T Consensus 18 RigGLifA~vLfi~GI~iilS 38 (67)
T 2jp3_A 18 QLGGLIFGGLLCIAGIALALS 38 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT
T ss_pred eecchhhHHHHHHHHHHHHHc
Confidence 455667777778777766553
No 105
>2wgn_B Inhibitor of cysteine peptidase compnd 3; hydrolase inhibitor, dynamics, peptidase inhibitor, cathepsi hydrolase inhibitor; NMR {Pseudomonas aeruginosa}
Probab=21.37 E-value=1.9e+02 Score=20.00 Aligned_cols=36 Identities=8% Similarity=0.102 Sum_probs=26.7
Q ss_pred eEEEEeccCcceEEEEEeCCCCCCC--ccEEEEEEEEE
Q 030061 97 QFAFTTTEAGNYMACFWLGSNPQKV--ADATLGLDWRI 132 (183)
Q Consensus 97 ~f~f~a~~~G~Y~~Cf~n~~~~~~~--~~~~V~f~i~~ 132 (183)
.|.|.+..+|++++=|.-..+|.+. ..+++.+.+.+
T Consensus 94 ~w~f~A~~~G~~~i~~~Y~RpWE~~~~~~~~F~l~V~V 131 (132)
T 2wgn_B 94 TWRFRVAASGDDRLELVYRRPWEKDAEPAESFSCAIQV 131 (132)
T ss_dssp EEEEEECSCEEEEEEEEEECTTSSSCCCSSEEEEEEEE
T ss_pred EEEEEEcCCceEEEEEEEECccCCCCCcceEEEEEEEE
Confidence 7899999999999999988777432 34556555543
No 106
>2h7w_A Chagasin; beta-strands, immunoglobulin-fold, hydrolase inhibitor; 1.70A {Trypanosoma cruzi} SCOP: b.1.26.1 PDB: 2nnr_A 2oul_B 3cbj_B 3cbk_B 3e1z_A 2fo8_A 2nqd_A*
Probab=20.88 E-value=2.1e+02 Score=19.69 Aligned_cols=37 Identities=11% Similarity=-0.018 Sum_probs=27.3
Q ss_pred eeEEEEeccCcceEEEEEeCCCCCC--CccEEEEEEEEE
Q 030061 96 GQFAFTTTEAGNYMACFWLGSNPQK--VADATLGLDWRI 132 (183)
Q Consensus 96 g~f~f~a~~~G~Y~~Cf~n~~~~~~--~~~~~V~f~i~~ 132 (183)
-.|.|.+..+|++++=|.-..+|.+ ...+++.+.+.+
T Consensus 92 ~~w~f~A~~~G~~~i~~~Y~RpWE~~~~~~~~f~l~V~V 130 (131)
T 2h7w_A 92 EHFHVTVKAAGTHAVNLTYMRPWTGPSHDSERFIVYLKA 130 (131)
T ss_dssp EEEEEEECSSEEEEEEEEEECTTTCCCTTCEEEEEEEEE
T ss_pred EEEEEEEccCceEEEEEEEECccCCCCCccEEEEEEEEE
Confidence 4789999999999999988777643 234666666643
No 107
>1txp_A HnRNP C, heterogeneous nuclear ribonucleoprotein C protein; antiparallel four helix coiled coil tetramer HNRNPC, signaling protein; NMR {Homo sapiens}
Probab=20.19 E-value=98 Score=15.55 Aligned_cols=22 Identities=9% Similarity=0.114 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc
Q 030061 157 RLEAQVQSIHENLLFLKHRSSL 178 (183)
Q Consensus 157 ~l~~~l~~I~~eq~y~r~RE~r 178 (183)
.|...+.+|+...+++-++-++
T Consensus 3 ~IkkELtQIK~kvDsLLe~Le~ 24 (28)
T 1txp_A 3 AIKKELTQIKQKVDSLLENLEK 24 (28)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 3444455555555555554443
No 108
>2wy3_B UL16, uncharacterized protein UL16; immune system-viral protein complex, immune response, innate immunity, structural mimicry; HET: NAG PEU; 1.80A {Human herpesvirus 5 strain AD169}
Probab=20.16 E-value=1.2e+02 Score=20.89 Aligned_cols=33 Identities=9% Similarity=0.182 Sum_probs=25.3
Q ss_pred cceeeeEcCCCcEEEEEEEEeeCCCCCCCCeeEEEEEC
Q 030061 44 TKCVSEEINSNVVVLADYYVIDEAHPEHPPTVSAKVTS 81 (183)
Q Consensus 44 ~~Cf~e~v~~~~~v~~~y~v~~~~~~~~~~~v~~~V~d 81 (183)
.-|+|+++.++..+-+.|..+..+ . -+++.++-
T Consensus 36 sicyy~nvt~dei~gvaf~~q~ne----s-~~d~wly~ 68 (158)
T 2wy3_B 36 SICYYENVTEDEIIGVAFTWQHNE----S-VVDLWLYQ 68 (158)
T ss_dssp EEEEEESCCTTCBEEEEEEETTCT----T-CEEEEEEE
T ss_pred EEEEecccCccceEEEEEEeecCc----h-hhhheeee
Confidence 369999999999999999887543 2 56666554
No 109
>2zxe_G FXYD10, phospholemman-like protein; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_G*
Probab=20.09 E-value=72 Score=20.03 Aligned_cols=21 Identities=24% Similarity=0.400 Sum_probs=14.6
Q ss_pred hhhHHHHHHHHHHHhhhcccc
Q 030061 10 RATVLPLILLLCLACYICVVP 30 (183)
Q Consensus 10 ~~~~~~~~~~~c~~~~~~~~~ 30 (183)
|.+-|.++.+||+..|+.+++
T Consensus 20 RigGLifA~vLfi~GI~iilS 40 (74)
T 2zxe_G 20 RVVGLIVAAVLCVIGIIILLA 40 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT
T ss_pred eeccchhHHHHHHHHHHHHHc
Confidence 456677777888888766653
Done!