BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030063
(183 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q93VI8|TLP7_ARATH Tubby-like F-box protein 7 OS=Arabidopsis thaliana GN=TULP7 PE=2
SV=1
Length = 379
Score = 167 bits (424), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/149 (59%), Positives = 101/149 (67%), Gaps = 13/149 (8%)
Query: 1 MSLRNSCLSRRISRSFGEAHKSSKETGLGAADDSVVSSTTSASMDSGAAAAHSSGSWAGL 60
M L S LSRRIS SF H+ ET +S+ + A S SW+ +
Sbjct: 1 MPLSRSLLSRRISNSF-RFHQG--ETTTAPESESIPPPSNMAG----------SSSWSAM 47
Query: 61 LPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQ 120
LPELLGEIIRRVE TED WP R++VV CACV K+WREIT D +S SGKITFPSCLK
Sbjct: 48 LPELLGEIIRRVEETEDRWPQRRDVVTCACVSKKWREITHDFARSSLNSGKITFPSCLKL 107
Query: 121 PGPREFPHQCLIRRNKKTSTFYLYLALTP 149
PGPR+F +QCLI+RNKKTSTFYLYLALTP
Sbjct: 108 PGPRDFSNQCLIKRNKKTSTFYLYLALTP 136
>sp|Q5QM27|TLP1_ORYSJ Tubby-like F-box protein 1 OS=Oryza sativa subsp. japonica GN=TULP1
PE=2 SV=1
Length = 356
Score = 137 bits (345), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 74/93 (79%), Gaps = 1/93 (1%)
Query: 57 WAGLLPELLGEIIRRVETTE-DSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFP 115
WA LLPEL+ E++RRVE + + WP R++VV+CACVC+RWR+ +V+ P SGKITFP
Sbjct: 34 WARLLPELMSEVVRRVEASGGERWPARKDVVSCACVCRRWRDAAVAVVRPPAESGKITFP 93
Query: 116 SCLKQPGPREFPHQCLIRRNKKTSTFYLYLALT 148
S LKQPGPREFP QC I+RNKK STFYLYL LT
Sbjct: 94 SSLKQPGPREFPMQCFIKRNKKNSTFYLYLGLT 126
>sp|Q68Y48|TLP9_ORYSJ Tubby-like F-box protein 9 OS=Oryza sativa subsp. japonica GN=TULP9
PE=2 SV=1
Length = 372
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 71/92 (77%)
Query: 57 WAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPS 116
W+ LLPELL EI+RRV+ + WP R++VVACACVC+RWR+ +V+ P G+ITFPS
Sbjct: 52 WSRLLPELLTEIMRRVDAGAERWPPRRDVVACACVCRRWRDAAVSVVRPPLECGRITFPS 111
Query: 117 CLKQPGPREFPHQCLIRRNKKTSTFYLYLALT 148
LKQPGPR+ P C IRRNKK STFYLYL+LT
Sbjct: 112 SLKQPGPRDAPMHCFIRRNKKNSTFYLYLSLT 143
>sp|Q69U54|TLP12_ORYSJ Tubby-like F-box protein 12 OS=Oryza sativa subsp. japonica
GN=TULP12 PE=2 SV=1
Length = 451
Score = 128 bits (321), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 95/157 (60%), Gaps = 6/157 (3%)
Query: 1 MSLRNSCLSRRISRSFGEAHKSSKE---TGL-GAADDSVVSSTTSASMDSGAAAAHSSGS 56
MS R+ + R + SFG + S E +GL G + S S S
Sbjct: 1 MSFRS--IVRDVRDSFGSLSRRSFEVRISGLPGLSGHHRGKSLGSLSELRDRPVVVDQSR 58
Query: 57 WAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPS 116
W GL PELL ++++R+E E +WP R++VVACA VC+ WREI KDIV+SP + GK+TFP
Sbjct: 59 WVGLPPELLRDVMKRLEEGESNWPSRKDVVACAAVCRTWREICKDIVQSPEICGKLTFPV 118
Query: 117 CLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPYVLS 153
LKQPGPR+ QC I+R+K T+YLYL L+P VLS
Sbjct: 119 SLKQPGPRDGLIQCFIKRDKSKLTYYLYLCLSPAVLS 155
>sp|Q94DT9|TLP2_ORYSJ Tubby-like F-box protein 2 OS=Oryza sativa subsp. japonica GN=TULP2
PE=2 SV=1
Length = 368
Score = 128 bits (321), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 55/92 (59%), Positives = 71/92 (77%)
Query: 57 WAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPS 116
W+ L+P+LL +I+R VE + WP R++VVACA VC+RWR++ +V+ P SGKITFPS
Sbjct: 51 WSALVPDLLADILRCVEAGSERWPPRRDVVACASVCRRWRDVAVAVVQPPLESGKITFPS 110
Query: 117 CLKQPGPREFPHQCLIRRNKKTSTFYLYLALT 148
LKQPGPR+ P QC I+RNKK STF+LYL LT
Sbjct: 111 SLKQPGPRDAPMQCFIKRNKKNSTFFLYLGLT 142
>sp|Q6Z2G9|TLP5_ORYSJ Tubby-like F-box protein 5 OS=Oryza sativa subsp. japonica GN=TULP5
PE=2 SV=1
Length = 428
Score = 127 bits (319), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 73/95 (76%)
Query: 55 GSWAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITF 114
G WA L PELL ++I+RVE +E +WP R+ VVACA VC+ WRE+TK++VK+ G+ITF
Sbjct: 66 GRWANLPPELLLDVIQRVEASEATWPARRQVVACAAVCRSWREVTKEVVKTLEECGRITF 125
Query: 115 PSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTP 149
P LKQPGPRE P QC +RR++ TST+ LYL L+P
Sbjct: 126 PISLKQPGPREHPVQCFVRRDRATSTYLLYLGLSP 160
>sp|Q53PP5|TLP13_ORYSJ Tubby-like F-box protein 13 OS=Oryza sativa subsp. japonica
GN=TULP13 PE=2 SV=1
Length = 440
Score = 126 bits (317), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 58/96 (60%), Positives = 73/96 (76%)
Query: 57 WAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPS 116
WA L PELL +II R+E +E +WP R++VVACA VC+ WRE+ K+IVK+P L GKITFP
Sbjct: 53 WASLPPELLRDIIERLEESEATWPSRKHVVACAGVCRTWREMCKEIVKNPELCGKITFPI 112
Query: 117 CLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPYVL 152
L+QPGPR+ QC IRR+K T T+YLYL+L VL
Sbjct: 113 SLRQPGPRDGTMQCFIRRDKSTQTYYLYLSLGSAVL 148
>sp|Q9ZP59|TLP1_ARATH Tubby-like F-box protein 1 OS=Arabidopsis thaliana GN=TULP1 PE=2
SV=1
Length = 455
Score = 124 bits (312), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 74/96 (77%)
Query: 57 WAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPS 116
WA L PELL ++I+R+E +E WP R++VVACA VC+ WR++ K+IV+SP LSGKITFP
Sbjct: 57 WANLPPELLRDVIKRLEESESVWPARRHVVACASVCRSWRDMCKEIVQSPELSGKITFPV 116
Query: 117 CLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPYVL 152
LKQPGPR+ QC I+R+K T++LYL L+P +L
Sbjct: 117 SLKQPGPRDATMQCFIKRDKSNLTYHLYLCLSPALL 152
>sp|Q8VY21|TLP3_ARATH Tubby-like F-box protein 3 OS=Arabidopsis thaliana GN=TULP3 PE=2
SV=1
Length = 406
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 76/122 (62%), Gaps = 5/122 (4%)
Query: 27 GLGAADDSVVSSTTSASMDSGAAAAHSSGSWAGLLPELLGEIIRRVETTEDSWPHRQNVV 86
G G + V TS +D A WA + PELL +++ R+E +ED+WP R+NVV
Sbjct: 27 GYGRSRSQRVVQDTSVPVD-----AFKQSCWASMPPELLRDVLMRIEQSEDTWPSRKNVV 81
Query: 87 ACACVCKRWREITKDIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLA 146
+CA VC+ WREI K+IV+ P LS K+TFP LKQPGPR QC I RN+ T+YLYL
Sbjct: 82 SCAGVCRNWREIVKEIVRVPELSSKLTFPISLKQPGPRGSLVQCYIMRNRSNQTYYLYLG 141
Query: 147 LT 148
L
Sbjct: 142 LN 143
>sp|Q75HX5|TLP8_ORYSJ Tubby-like F-box protein 8 OS=Oryza sativa subsp. japonica GN=TULP8
PE=2 SV=1
Length = 445
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 94/159 (59%), Gaps = 10/159 (6%)
Query: 1 MSLRNSCLSRRISRSFGEAHKSSKE------TGLGAADDSVVSSTTSASMDSGAAAAHSS 54
MS R+ + R + SFG + S E +GL ST D+ S
Sbjct: 1 MSFRS--IVRDVRDSFGSLSRRSFEVTLAGLSGLTGHHRGKSQSTVHELCDADLIIQESR 58
Query: 55 GSWAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITF 114
WA L PELL ++IRR+E +E +WP R++VV+CA VCK WRE+ K+IV SP GK+TF
Sbjct: 59 --WASLPPELLRDVIRRLEASESTWPSRKDVVSCAAVCKAWREMCKEIVLSPEFCGKLTF 116
Query: 115 PSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPYVLS 153
P LKQPGPR+ QC I+R+K ST++LYL L+ VL+
Sbjct: 117 PLSLKQPGPRDGMIQCFIKRDKSKSTYHLYLCLSTAVLA 155
>sp|Q2QXB2|TLP14_ORYSJ Tubby-like F-box protein 14 OS=Oryza sativa subsp. japonica
GN=TULP14 PE=2 SV=1
Length = 445
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 71/99 (71%)
Query: 54 SGSWAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKIT 113
S WA L PELL ++I R+E +E +WP R+NVVACA VC+ WR++ ++IVK+P GKIT
Sbjct: 56 SSCWANLPPELLRDVIERLEASEAAWPSRKNVVACAAVCRTWRDMCREIVKNPEFCGKIT 115
Query: 114 FPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPYVL 152
FP LKQPGPR QC I+R+K T T+ LYL L+ VL
Sbjct: 116 FPVSLKQPGPRNGAIQCFIKRDKSTQTYNLYLCLSSAVL 154
>sp|Q0WPY0|TLP6_ARATH Tubby-like F-box protein 6 OS=Arabidopsis thaliana GN=TULP6 PE=2
SV=1
Length = 413
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 53/93 (56%), Positives = 69/93 (74%)
Query: 57 WAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPS 116
W L PELL +II+R+E+ + WP R++VVACA VCK WRE+TK++VK P LSG ITFP
Sbjct: 69 WVDLPPELLLDIIQRIESEQSLWPGRRDVVACASVCKSWREMTKEVVKVPELSGLITFPI 128
Query: 117 CLKQPGPREFPHQCLIRRNKKTSTFYLYLALTP 149
L+QPGPR+ P QC I+R + T + LYL L+P
Sbjct: 129 SLRQPGPRDAPIQCFIKRERATGIYRLYLGLSP 161
>sp|Q7XSV4|TLP7_ORYSJ Tubby-like F-box protein 7 OS=Oryza sativa subsp. japonica GN=TULP7
PE=2 SV=1
Length = 462
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 92/154 (59%), Gaps = 5/154 (3%)
Query: 1 MSLRNSCLSRRISRSFGEAHKSSKETGLG--AADDSVVSSTTSASMDSGAAAAHSSGSWA 58
MS R+ + R SFG K S E + + S S+ +D A S WA
Sbjct: 1 MSFRS--IVRDFRDSFGTLSKRSFEVKISGFSGRHRGKSIGPSSELDDTPVVAQQS-KWA 57
Query: 59 GLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCL 118
GL PELL ++++R+E + +WP R++VVACA VC WR++ KDIV++P GK+TFP L
Sbjct: 58 GLPPELLRDVMKRLEEDDSNWPSRKDVVACASVCTTWRDMCKDIVRNPEFCGKLTFPVSL 117
Query: 119 KQPGPREFPHQCLIRRNKKTSTFYLYLALTPYVL 152
KQPGPR+ QC I+R+K T++LYL L+ VL
Sbjct: 118 KQPGPRDGVIQCFIKRDKSKLTYHLYLCLSSAVL 151
>sp|Q10LG8|TLP6_ORYSJ Tubby-like F-box protein 6 OS=Oryza sativa subsp. japonica GN=TULP6
PE=2 SV=1
Length = 403
Score = 120 bits (300), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 54/92 (58%), Positives = 69/92 (75%)
Query: 57 WAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPS 116
WA L PELL E++ R+E +E WP R++VVACA VC+ WR ITK+IV+ P SGK+TFP
Sbjct: 52 WAQLPPELLREVLVRIEESEVWWPSRRDVVACAGVCRSWRGITKEIVRVPEASGKLTFPI 111
Query: 117 CLKQPGPREFPHQCLIRRNKKTSTFYLYLALT 148
LKQPGPR+ +C IRRN+ T T+YLY+ LT
Sbjct: 112 SLKQPGPRDGTLKCFIRRNRTTQTYYLYIGLT 143
>sp|Q8H485|TLP11_ORYSJ Tubby-like F-box protein 11 OS=Oryza sativa subsp. japonica
GN=TULP11 PE=2 SV=1
Length = 406
Score = 120 bits (300), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 70/103 (67%)
Query: 46 SGAAAAHSSGSWAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKS 105
S AA W L PELL E++ RVE +E WP R++VVACA VC+ WR I ++IV++
Sbjct: 44 SAAALVMRESCWTQLPPELLREVLARVEESEGWWPRRRDVVACAGVCRSWRGIVREIVRT 103
Query: 106 PFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALT 148
P SG +TFP LKQPGPR+ P +C I RN+ T T+YLY+ LT
Sbjct: 104 PEASGNLTFPISLKQPGPRDAPMKCFIVRNRTTQTYYLYIGLT 146
>sp|Q688Y7|TLP10_ORYSJ Tubby-like F-box protein 10 OS=Oryza sativa subsp. japonica
GN=TULP10 PE=2 SV=1
Length = 352
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 69/89 (77%), Gaps = 1/89 (1%)
Query: 60 LLPELLGEIIRRVETTE-DSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCL 118
LLPEL+ E++RRVE + + WP R+++V+CACVC+RWRE +V+ SG+ITFPS L
Sbjct: 27 LLPELVEEVVRRVEASGGERWPARKDLVSCACVCRRWREAAAAVVRPLPESGRITFPSSL 86
Query: 119 KQPGPREFPHQCLIRRNKKTSTFYLYLAL 147
KQPGP++FP QC ++RNKK S FYLYL L
Sbjct: 87 KQPGPKDFPIQCFVKRNKKKSMFYLYLGL 115
>sp|Q944S3|TLP5_ARATH Tubby-like F-box protein 5 OS=Arabidopsis thaliana GN=TULP5 PE=2
SV=1
Length = 429
Score = 117 bits (293), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 85/139 (61%), Gaps = 16/139 (11%)
Query: 15 SFGEAHKSSKETGLGA-ADDSVVSSTTSASMDSGAAAAHSSGSWAGLLPELLGEIIRRVE 73
S G H+ SK G+ A +D +V T WA L LL +++++++
Sbjct: 27 SNGTTHQRSKSHGVEAHIEDLIVIKNTR---------------WANLPAALLRDVMKKLD 71
Query: 74 TTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQPGPREFPHQCLIR 133
+E +WP R+ VVACA VCK WR + KDIVKSP SGK+TFP LKQPGPR+ QC I+
Sbjct: 72 ESESTWPARKQVVACAGVCKTWRLMCKDIVKSPEFSGKLTFPVSLKQPGPRDGIIQCYIK 131
Query: 134 RNKKTSTFYLYLALTPYVL 152
R+K T++LYL+L+P +L
Sbjct: 132 RDKSNMTYHLYLSLSPAIL 150
>sp|Q8GVE5|TLP2_ARATH Tubby-like F-box protein 2 OS=Arabidopsis thaliana GN=TULP2 PE=2
SV=1
Length = 394
Score = 116 bits (291), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 66/93 (70%)
Query: 57 WAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPS 116
WA L PELL +II RVE +E +WP R VV+CA VCK WR IT +IV+ P GK+TFP
Sbjct: 48 WASLPPELLHDIIWRVEESETAWPARAAVVSCASVCKSWRGITMEIVRIPEQCGKLTFPI 107
Query: 117 CLKQPGPREFPHQCLIRRNKKTSTFYLYLALTP 149
LKQPGPR+ P QC I+RN+ T+T+ LY L P
Sbjct: 108 SLKQPGPRDSPIQCFIKRNRATATYILYYGLMP 140
>sp|Q9FRH7|TLP10_ARATH Tubby-like F-box protein 10 OS=Arabidopsis thaliana GN=TULP10 PE=1
SV=1
Length = 445
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 77/112 (68%)
Query: 41 SASMDSGAAAAHSSGSWAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITK 100
S+S D + + WA L PELL ++I+R+E +E +WP R++VVACA VC+ WR + +
Sbjct: 43 SSSRDLLSPVIVQTSRWANLPPELLFDVIKRLEESESNWPARKHVVACASVCRSWRAMCQ 102
Query: 101 DIVKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPYVL 152
+IV P + GK+TFP LKQPGPR+ QC I+R+K TF+L+L L+P +L
Sbjct: 103 EIVLGPEICGKLTFPVSLKQPGPRDAMIQCFIKRDKSKLTFHLFLCLSPALL 154
>sp|Q8LJA9|TLP3_ORYSJ Tubby-like F-box protein 3 OS=Oryza sativa subsp. japonica GN=TULP3
PE=2 SV=1
Length = 448
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 87/157 (55%), Gaps = 10/157 (6%)
Query: 1 MSLRNSCLSRRISRSFGEAHKSSKET------GLGAADDSVVSSTTSASMDSGAAAAHSS 54
MS R+ + R + FG + S E GL S+ DS A S
Sbjct: 1 MSFRS--IVRDVRDGFGSLSRRSFEVTLASLYGLTGHHKGKTQSSLDELDDSPAIIPESR 58
Query: 55 GSWAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITF 114
WA L PELL E+IRR+E E +WP R+NVV A VC+ WRE+ K+ V SP GK+TF
Sbjct: 59 --WASLPPELLREVIRRLEADESTWPSRRNVVCFAAVCRTWREMCKETVLSPEFCGKLTF 116
Query: 115 PSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALTPYV 151
P +KQPGPR+ QC I+RN+ ST++LYL L+ V
Sbjct: 117 PVSIKQPGPRDGMIQCYIKRNRSKSTYHLYLCLSNVV 153
>sp|Q9SQU1|TLP9_ARATH Tubby-like F-box protein 9 OS=Arabidopsis thaliana GN=TULP9 PE=1
SV=1
Length = 380
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 73/106 (68%), Gaps = 3/106 (2%)
Query: 46 SGAAAAHSSG--SWAGLLPELLGEIIRRVETTED-SWPHRQNVVACACVCKRWREITKDI 102
+ A+ A+SS SW+ L ELL EI+ RVET + WP R+NVVACA VC+ WR +TK+I
Sbjct: 20 AAASTANSSDPFSWSELPEELLREILIRVETVDGGDWPSRRNVVACAGVCRSWRILTKEI 79
Query: 103 VKSPFLSGKITFPSCLKQPGPREFPHQCLIRRNKKTSTFYLYLALT 148
V P S K+TFP LKQ GPR+ QC I+RN+ T +++LYL LT
Sbjct: 80 VAVPEFSSKLTFPISLKQSGPRDSLVQCFIKRNRNTQSYHLYLGLT 125
>sp|O80699|TLP4_ARATH Putative Tubby-like protein 4 OS=Arabidopsis thaliana GN=TULP4 PE=3
SV=1
Length = 265
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 60/85 (70%)
Query: 62 PELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFPSCLKQP 121
PELL +++ R+E +ED+WP R+NVV+C VCK WR+I K+IV P +S K TFP LKQP
Sbjct: 3 PELLRDVLMRIERSEDTWPSRKNVVSCVGVCKNWRQIFKEIVNVPEVSSKFTFPISLKQP 62
Query: 122 GPREFPHQCLIRRNKKTSTFYLYLA 146
GP QC ++RN+ TFYLYL
Sbjct: 63 GPGGSLVQCYVKRNRSNQTFYLYLG 87
>sp|Q6NPQ1|TLP11_ARATH Tubby-like F-box protein 11 OS=Arabidopsis thaliana GN=TULP11 PE=2
SV=1
Length = 389
Score = 97.1 bits (240), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
Query: 57 WAGLLPELLGEIIRRVETTEDS-WPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFP 115
W+ + ELL EI+ RVE + WP R++VVACA VC+ WR + + V P +S K+TFP
Sbjct: 39 WSEIPEELLREILIRVEAADGGGWPSRRSVVACAGVCRGWRLLMNETVVVPEISSKLTFP 98
Query: 116 SCLKQPGPREFPHQCLIRRNKKTSTFYLYLALT 148
LKQPGPR+ QC I+RN+ T +++LYL LT
Sbjct: 99 ISLKQPGPRDSLVQCFIKRNRITQSYHLYLGLT 131
>sp|Q9FLP7|FB294_ARATH Putative F-box protein At5g55150 OS=Arabidopsis thaliana
GN=At5g55150 PE=4 SV=2
Length = 360
Score = 33.5 bits (75), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 11/62 (17%)
Query: 51 AHSSGSWAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDI----VKSP 106
A S SW+ LPELL + + D ++ CA VC W++ + + SP
Sbjct: 2 ALPSSSWSEFLPELLNTVFHNLNDARD-------ILNCATVCSSWKDSSSAVYYSRTFSP 54
Query: 107 FL 108
FL
Sbjct: 55 FL 56
>sp|Q8FNG2|ISPT2_COREF Isoprenyl transferase 2 OS=Corynebacterium efficiens (strain DSM
44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395)
GN=uppS2 PE=3 SV=1
Length = 243
Score = 32.3 bits (72), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 40/110 (36%), Gaps = 20/110 (18%)
Query: 52 HSSG---SWAGLLPELLGEIIRRVETTEDSWPHRQNVVACACV--------CKRWREITK 100
H G W G P L +IR +E E+ N+ CV REI +
Sbjct: 98 HEKGVRVRWVGRRPRLWRSVIRELEAAEELTKDNTNMTLAMCVNYGGRAEIIDAAREIAR 157
Query: 101 DIVKSPFLSGKI---TFPSCLKQPGPREFPHQCLIRR---NKKTSTFYLY 144
+I TFP L +P + P L R K+TS F L+
Sbjct: 158 QAAAGQLRPEQINEKTFPDFLDEP---DMPDVDLFLRPSGEKRTSNFLLW 204
>sp|Q8NNC1|ISPT2_CORGL Isoprenyl transferase 2 OS=Corynebacterium glutamicum (strain ATCC
13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)
GN=uppS2 PE=3 SV=1
Length = 243
Score = 31.6 bits (70), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 43/110 (39%), Gaps = 20/110 (18%)
Query: 52 HSSG---SWAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWR----EITKDIVK 104
H G W G P L +IR +ET E+ + CV R + +DI +
Sbjct: 98 HEKGVRVRWVGRRPRLWRSVIRELETAEELTKDNTTMTLAMCVNYGGRAEIIDAARDIAR 157
Query: 105 -------SPFLSGKITFPSCLKQPGPREFPHQCLIRR---NKKTSTFYLY 144
P + TFP+ L +P + P L R K+TS F L+
Sbjct: 158 LAAEGKLRPEQITEKTFPNFLDEP---DMPDVDLFLRPSGEKRTSNFLLW 204
>sp|Q9M0M7|FB234_ARATH Putative F-box protein At4g17200 OS=Arabidopsis thaliana
GN=At4g17200 PE=4 SV=1
Length = 381
Score = 30.8 bits (68), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 8/44 (18%)
Query: 58 AGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKD 101
+ L P+L+GEI+ RV T ++++ C CK W ++K+
Sbjct: 5 SDLSPDLVGEILTRVPMT--------SLISVRCTCKMWNALSKE 40
>sp|Q9ZQ60|FB102_ARATH F-box protein At2g14290 OS=Arabidopsis thaliana GN=At2g14290 PE=2
SV=1
Length = 353
Score = 30.4 bits (67), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 19/73 (26%)
Query: 56 SWAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFP 115
+W+ L P+LLG I R+ T+ HR + VC W LS K+T P
Sbjct: 8 TWSELPPDLLGSIFHRLSFTDF---HRAKI-----VCWNWN-----------LSSKLTVP 48
Query: 116 SCLKQPGPREFPH 128
++ P FP
Sbjct: 49 KKIRSPWLMLFPE 61
>sp|Q9M0U8|FBL21_ARATH Putative F-box/LRR-repeat protein 21 OS=Arabidopsis thaliana
GN=FBL21 PE=4 SV=1
Length = 304
Score = 30.4 bits (67), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 11/63 (17%)
Query: 56 SWAGLLPELLGEIIRRVETTEDSWPHRQNVVACACVCKRWREITKDIVKSPFLSGKITFP 115
+W L PEL I+ R+ T D + Q V CK WR I KD P + KI
Sbjct: 45 NWVDLPPELTTSILLRLSLT-DILDNAQKV------CKEWRRICKD----PSMWRKINTR 93
Query: 116 SCL 118
CL
Sbjct: 94 DCL 96
>sp|Q2RN85|DCUP_RHORT Uroporphyrinogen decarboxylase OS=Rhodospirillum rubrum (strain
ATCC 11170 / NCIB 8255) GN=hemE PE=3 SV=1
Length = 348
Score = 30.0 bits (66), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 23 SKETGLGAADDSVVSSTTS---ASMDSGAAAAHSSGSWAGLLPE 63
S+ A + ++S+TT A +D+GA A +WAG+LPE
Sbjct: 174 SRPDDFAALMEVLISATTDYLIAQIDAGAEAIQIFDTWAGVLPE 217
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.133 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,465,161
Number of Sequences: 539616
Number of extensions: 2512709
Number of successful extensions: 7422
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 6845
Number of HSP's gapped (non-prelim): 577
length of query: 183
length of database: 191,569,459
effective HSP length: 110
effective length of query: 73
effective length of database: 132,211,699
effective search space: 9651454027
effective search space used: 9651454027
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)