Query 030075
Match_columns 183
No_of_seqs 113 out of 405
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 12:55:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030075.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030075hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rzn_A GLTP, glycolipid transf 100.0 1.3E-48 4.3E-53 322.9 12.6 143 36-178 14-163 (209)
2 3kv0_A HET-C2; GLTP, glycolipi 100.0 3.2E-48 1.1E-52 320.5 13.1 137 37-178 34-171 (209)
3 2i3f_A Glycolipid transfer-lik 100.0 1.3E-47 4.3E-52 319.9 14.2 153 6-178 7-160 (224)
4 2jtt_C Calcyclin-binding prote 48.5 28 0.00097 20.2 3.9 27 124-150 8-34 (35)
5 3ubw_A 14-3-3E, 14-3-3 protein 40.5 93 0.0032 25.8 7.4 99 43-153 118-232 (261)
6 2hn1_A CORA, magnesium and cob 38.9 1.3E+02 0.0046 23.7 8.0 84 53-151 175-262 (266)
7 3iqu_A 14-3-3 protein sigma; s 38.7 68 0.0023 26.2 6.2 104 44-153 96-209 (236)
8 1mdy_A Protein (MYOD BHLH doma 34.1 98 0.0033 20.2 5.6 40 11-57 24-63 (68)
9 4egw_A Magnesium transport pro 28.0 2.3E+02 0.0078 22.6 9.8 82 54-149 160-245 (280)
10 2f6m_A Suppressor protein STP2 27.7 63 0.0021 21.3 3.4 32 13-54 17-48 (65)
11 2bbh_A Divalent cation transpo 22.8 2.4E+02 0.0081 22.1 6.8 84 53-150 174-261 (269)
12 3uzd_A 14-3-3 protein gamma; s 21.6 1.7E+02 0.006 23.9 5.8 99 43-153 91-207 (248)
13 1deq_A Fibrinogen (alpha chain 21.3 2.1E+02 0.0071 25.1 6.4 35 60-94 108-142 (390)
14 1vp7_A Exodeoxyribonuclease VI 20.5 1.3E+02 0.0043 21.4 4.1 53 14-77 32-84 (100)
15 1xpp_A TA1416, DNA-directed RN 20.2 77 0.0026 23.0 3.0 31 40-70 73-103 (115)
No 1
>3rzn_A GLTP, glycolipid transfer protein; GLTP-fold, lipid transport; HET: CIS; 1.10A {Homo sapiens} PDB: 1sx6_A* 2euk_A* 2eum_A* 2evd_A* 2evl_A* 2evs_A* 1swx_A 3rwv_A* 3s0k_A* 3s0i_A* 2evt_A* 1wbe_A* 3ric_A* 1tfj_A* 2bv7_A*
Probab=100.00 E-value=1.3e-48 Score=322.90 Aligned_cols=143 Identities=26% Similarity=0.497 Sum_probs=135.1
Q ss_pred CCCCCChHHHHHHHHHHHHHHhhhcc-hhHHHHHHHHHhHHHHHHHhhhCccchhhHHHHHHHHHHcCCCC-CCCchhhH
Q 030075 36 PRIHIPTKPFLHLCNLVLQVLDKIGP-TMLVLRQDIHQNIQRLEKFCELDPSKYANVVEILKKEASEGNAR-KKTSCSKA 113 (183)
Q Consensus 36 ~~~~I~~~~fl~a~~~l~~~fd~LG~-~F~fv~~Dv~~nI~kL~~~~~~~~~~~~TL~~mv~~E~~~g~~~-k~~S~tr~ 113 (183)
++++|+|.+||+||++|++|||+||+ +|+||++||.|||++|+++++.+|.+|.||++||++|++.|+.. ++.|||++
T Consensus 14 ~~~~i~t~~fL~a~~~l~~~~d~LG~~~F~~v~~D~~~nI~kl~~~~~~~~~~~~tL~~mv~~E~~~~~~~~~~~s~tr~ 93 (209)
T 3rzn_A 14 ADKQIETGPFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVYDTNPAKFRTLQNILEVEKEMYGAEWPKVGATLA 93 (209)
T ss_dssp TTCCCBHHHHHHHHTTSGGGGGGSSCGGGHHHHHHHHHHHHHHHHHHHHCTTTTSBHHHHHHHHHHHHGGGTTSSHHHHH
T ss_pred CCCCcCHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHhcCchhhccHHHHHHHHHHcCCcccCCchHHHH
Confidence 58889999999999999999999999 99999999999999999999999999999999999999998764 47899999
Q ss_pred HHHHHhHHHHHHHHHHHHHcCCCC-----cHHHHHHHHHHhhhccccchhHHHHHHHhcccCCCcchhhh
Q 030075 114 FLWLTRSLDFMVALLQRLAKDPGQ-----KMEQAVEESYNIALKPWHGWISSAAFKVMIPPYPISSIYQI 178 (183)
Q Consensus 114 LLwL~RaL~Fi~~fl~~l~~~~~~-----~l~~~a~~AY~~tL~~yH~w~vR~~~~~A~~~~P~R~~F~~ 178 (183)
||||||||+|++.||+++.+++++ +++++|++||++||+|||||+||++|++||+++|+|++|+.
T Consensus 94 LLwL~R~L~fi~~~l~~l~~~~~~~~~~~~l~~~~~~AY~~tL~~~H~w~vr~a~~~A~~a~P~R~~fl~ 163 (209)
T 3rzn_A 94 LMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNATKAYEMALKKYHGWIVQKIFQAALYAAPYKSDFLK 163 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCTTSTTCCHHHHHHHHHHHTGGGSCHHHHHHHHHHGGGCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccchhHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHhCCCHHHHHH
Confidence 999999999999999999886543 38999999999999999999999999999999999999975
No 2
>3kv0_A HET-C2; GLTP, glycolipid transfer protein, transport protein; HET: MLY; 1.90A {Podospora anserina}
Probab=100.00 E-value=3.2e-48 Score=320.51 Aligned_cols=137 Identities=18% Similarity=0.392 Sum_probs=132.3
Q ss_pred CCCCChHHHHHHHHHHHHHHhhhcc-hhHHHHHHHHHhHHHHHHHhhhCccchhhHHHHHHHHHHcCCCCCCCchhhHHH
Q 030075 37 RIHIPTKPFLHLCNLVLQVLDKIGP-TMLVLRQDIHQNIQRLEKFCELDPSKYANVVEILKKEASEGNARKKTSCSKAFL 115 (183)
Q Consensus 37 ~~~I~~~~fl~a~~~l~~~fd~LG~-~F~fv~~Dv~~nI~kL~~~~~~~~~~~~TL~~mv~~E~~~g~~~k~~S~tr~LL 115 (183)
+++|+|.+||++|++|++|||+||+ +|+||++||.+||++|++++.++|.+|.||++||++|++++ ++|||++||
T Consensus 34 ~~~I~t~~fL~a~~~l~~~fd~LG~~~F~~v~~D~~~nI~kl~~~~~~~~~~~~tL~~mv~~E~~~~----~~S~tr~LL 109 (209)
T 3kv0_A 34 GNAISTAEFLEAAESLTTMFDVLGSIAFSPVXTDMLGNVEXIRXRMLAAPLESQNIQDLVRNELXTX----SHTATEGLL 109 (209)
T ss_dssp TSEEBHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHSGGGCSBHHHHHHHHTCC-----CCHHHHHHH
T ss_pred CCCccHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHhHHHHHHHhhcCchhhchHHHHHHHHHHhc----ccchHHHHH
Confidence 7889999999999999999999999 99999999999999999999999999999999999999985 689999999
Q ss_pred HHHhHHHHHHHHHHHHHcCCCCcHHHHHHHHHHhhhccccchhHHHHHHHhcccCCCcchhhh
Q 030075 116 WLTRSLDFMVALLQRLAKDPGQKMEQAVEESYNIALKPWHGWISSAAFKVMIPPYPISSIYQI 178 (183)
Q Consensus 116 wL~RaL~Fi~~fl~~l~~~~~~~l~~~a~~AY~~tL~~yH~w~vR~~~~~A~~~~P~R~~F~~ 178 (183)
||||||+|++.||+++. +++++++++|++||++||+|||||+||++|++||+++|+|++|+.
T Consensus 110 wL~RaL~fi~~~l~~l~-~~~~~l~~~~~~AY~~tL~~yHgw~vr~af~~A~~a~P~R~~fl~ 171 (209)
T 3kv0_A 110 WLVRGLEFTCIALSXNI-GSTEELADSFRGSYRVTLXPHHSFLVXPIFSAAMSACPYRXDFYA 171 (209)
T ss_dssp HHHHHHHHHHHHHHHHH-TSCCCHHHHHHHHHHHTTGGGSCTTTHHHHHHHHHTCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHc-CCCCcHHHHHHHHHHHHHhcccchHHHHHHHHHHHhCCcHHHHHH
Confidence 99999999999999999 778899999999999999999999999999999999999999975
No 3
>2i3f_A Glycolipid transfer-like protein; GLTP superfamily, GLTP-like, protein structure initiative, PSI; 1.38A {Galdieria sulphuraria} PDB: 2q52_A
Probab=100.00 E-value=1.3e-47 Score=319.90 Aligned_cols=153 Identities=25% Similarity=0.424 Sum_probs=139.2
Q ss_pred hhhhchHHHHHHHHHHhhhhccCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhcchhHHHHHHHHHhHHHHHHHhhhCc
Q 030075 6 EIEKSSSEIRSAIEELSMFIKLKPKDNLDAPRIHIPTKPFLHLCNLVLQVLDKIGPTMLVLRQDIHQNIQRLEKFCELDP 85 (183)
Q Consensus 6 ~~~~~~~~~~~a~eel~~~~~~~~~~~~~~~~~~I~~~~fl~a~~~l~~~fd~LG~~F~fv~~Dv~~nI~kL~~~~~~~~ 85 (183)
+-.-.++++..+|+++.. . ++++|+|.+||+||++|++|||+||++|+||++||.|||++| +.++|
T Consensus 7 ~~~f~l~~v~~~F~~~~~----------~-~~~~I~t~~FL~a~~~l~~~fd~LG~~F~~v~~Dv~gnI~kL---~~~~p 72 (224)
T 2i3f_A 7 EEKEDFGIIVILWKQVTV----------K-EDGKVPLEPFLTAAKEVLRVVDAFGSGFRIVKNDIAGNIKKL---YRANQ 72 (224)
T ss_dssp ----CTTHHHHHHHTSCC----------C-TTCCCBHHHHHHHHHHTHHHHHHHCGGGHHHHHHHHHHHHHH---HHHHT
T ss_pred ccCCCHHHHHHHHHHhhc----------c-CCCCccHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH---HhhCc
Confidence 345578889999988764 1 357899999999999999999999999999999999999999 66679
Q ss_pred c-chhhHHHHHHHHHHcCCCCCCCchhhHHHHHHhHHHHHHHHHHHHHcCCCCcHHHHHHHHHHhhhccccchhHHHHHH
Q 030075 86 S-KYANVVEILKKEASEGNARKKTSCSKAFLWLTRSLDFMVALLQRLAKDPGQKMEQAVEESYNIALKPWHGWISSAAFK 164 (183)
Q Consensus 86 ~-~~~TL~~mv~~E~~~g~~~k~~S~tr~LLwL~RaL~Fi~~fl~~l~~~~~~~l~~~a~~AY~~tL~~yH~w~vR~~~~ 164 (183)
. +|.||++||++|+ + +++|||++||||||||+|++.||++++++++ +++++|++||++||+|||||+||++|+
T Consensus 73 ~~~~~TL~~mv~~E~-~----k~~S~tr~LLwL~RaL~Fi~~~l~~l~~~~~-~l~~~~~~AY~~tL~~yHgwivr~af~ 146 (224)
T 2i3f_A 73 TVHAETLQELIIAEN-S----PDGLATVALLWLKRAFQFIASFLRRLVVTDK-SLEQCVTEAYNCTLRPCHSAVIQKVFW 146 (224)
T ss_dssp TTCCSBHHHHHHHHC-S----TTCHHHHHHHHHHHHHHHHHHHHHHHHHCCS-CHHHHHHHHHHTTTGGGSCHHHHHHHH
T ss_pred cchhhhHHHHHHHHH-h----cCCchhHHHHHHHHHHHHHHHHHHHHhcCCc-hHHHHHHHHHHHHhhcCCchHHHHHHH
Confidence 8 9999999999999 4 4689999999999999999999999999888 999999999999999999999999999
Q ss_pred HhcccCCCcchhhh
Q 030075 165 VMIPPYPISSIYQI 178 (183)
Q Consensus 165 ~A~~~~P~R~~F~~ 178 (183)
+||+++|+|++|+.
T Consensus 147 ~Am~a~P~R~~fl~ 160 (224)
T 2i3f_A 147 GGVKLAPSRERFYR 160 (224)
T ss_dssp HHHTTCCCHHHHHH
T ss_pred HHHHhCCCHHHHHH
Confidence 99999999999975
No 4
>2jtt_C Calcyclin-binding protein; S100A6, SIAH-1 interacting protein, ubiquitination, E3 ligase complex, beta-catenin, calcium, cell cycle, mitogen; NMR {Mus musculus}
Probab=48.45 E-value=28 Score=20.19 Aligned_cols=27 Identities=11% Similarity=0.430 Sum_probs=22.8
Q ss_pred HHHHHHHHHcCCCCcHHHHHHHHHHhh
Q 030075 124 MVALLQRLAKDPGQKMEQAVEESYNIA 150 (183)
Q Consensus 124 i~~fl~~l~~~~~~~l~~~a~~AY~~t 150 (183)
+..||++|..+.+++++.+..+||.++
T Consensus 8 l~~~fk~iY~~gddd~kram~KS~~eS 34 (35)
T 2jtt_C 8 LMNVLKKIYEDGDDDMKRTINKAWVES 34 (35)
T ss_dssp HHHHHHHHHTTCCSSHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhhc
Confidence 457899999988899999999999764
No 5
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=40.51 E-value=93 Score=25.78 Aligned_cols=99 Identities=17% Similarity=0.308 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHHhhh---------cchhHH-HHHHHHHhHHHHHH------HhhhCccchhhHHHHHHHHHHcCCCCC
Q 030075 43 KPFLHLCNLVLQVLDKI---------GPTMLV-LRQDIHQNIQRLEK------FCELDPSKYANVVEILKKEASEGNARK 106 (183)
Q Consensus 43 ~~fl~a~~~l~~~fd~L---------G~~F~f-v~~Dv~~nI~kL~~------~~~~~~~~~~TL~~mv~~E~~~g~~~k 106 (183)
.++..-|.+|+.++|.. ..+|.. .+.|+-.-+.-+.. ..+.....|..-.++...+
T Consensus 118 ~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlAE~~~g~~rk~~~e~a~~aY~~A~~iA~~~-------- 189 (261)
T 3ubw_A 118 TELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTE-------- 189 (261)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHHHHhccccCCcHHHHHHHHHhhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHHhh--------
Confidence 45777899999999985 235533 66676543322211 0011112233322222221
Q ss_pred CCchhhHHHHHHhHHHHHHHHHHHHHcCCCCcHHHHHHHHHHhhhcc
Q 030075 107 KTSCSKAFLWLTRSLDFMVALLQRLAKDPGQKMEQAVEESYNIALKP 153 (183)
Q Consensus 107 ~~S~tr~LLwL~RaL~Fi~~fl~~l~~~~~~~l~~~a~~AY~~tL~~ 153 (183)
-+.|.. +||-=+|+|. +|+-.++.+|+ ..-.+|++|++.+.+.
T Consensus 190 -L~pThP-irLGLaLNfS-VFyYEIln~p~-~Ac~LAk~AFd~Ai~e 232 (261)
T 3ubw_A 190 -LPPTHP-IRLGLALNFS-VFYYEILNSPD-RACRLAKAAFDDAIAE 232 (261)
T ss_dssp -SCTTCH-HHHHHHHHHH-HHHHHTSCCHH-HHHHHHHHHHHHHHHT
T ss_pred -CCCCCc-HHHHHHHHHH-HHHHHHcCCHH-HHHHHHHHHHHHHHHH
Confidence 122333 7899999995 77777777654 4567788999887553
No 6
>2hn1_A CORA, magnesium and cobalt transporter; integral membrane protein fragment, metal transporter protei divalent cations, metal transport; 2.90A {Archaeoglobus fulgidus}
Probab=38.88 E-value=1.3e+02 Score=23.66 Aligned_cols=84 Identities=15% Similarity=0.177 Sum_probs=54.2
Q ss_pred HHHHhhhcchhHHHHHHHHHhHHHHHHHhhhCccchhhHHHHHHHHHHcCCCCCCCchhhHHHHHHhHHHHHHHHHHHHH
Q 030075 53 LQVLDKIGPTMLVLRQDIHQNIQRLEKFCELDPSKYANVVEILKKEASEGNARKKTSCSKAFLWLTRSLDFMVALLQRLA 132 (183)
Q Consensus 53 ~~~fd~LG~~F~fv~~Dv~~nI~kL~~~~~~~~~~~~TL~~mv~~E~~~g~~~k~~S~tr~LLwL~RaL~Fi~~fl~~l~ 132 (183)
..++|.+=..+..+-.++...++.|++..-.++. ..++++... -+.++.|+|++.=....+..|.
T Consensus 175 ~~lld~ivd~y~~~l~~i~~~id~lE~~l~~~~~--~~l~~l~~l-------------rr~l~~lrr~l~p~~~vl~~L~ 239 (266)
T 2hn1_A 175 YTILDAVVDSYFEALLKISDEIEVLEDEVVSGDS--TLIGKIHSL-------------KREILAFRNAVWPLRDVLSFFT 239 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC--CCCCHHHHH-------------HHHHHHHHHHHTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcH--HHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555666777888888888776543332 444444443 3567888888888888888887
Q ss_pred cCC----CCcHHHHHHHHHHhhh
Q 030075 133 KDP----GQKMEQAVEESYNIAL 151 (183)
Q Consensus 133 ~~~----~~~l~~~a~~AY~~tL 151 (183)
..+ ++....-.++.|+.+.
T Consensus 240 ~~~~~~~~~~~~~~lrDv~dh~~ 262 (266)
T 2hn1_A 240 RVEHELIGEEVKVYYRDVYDHAV 262 (266)
T ss_dssp HCCCTTSCTTTHHHHHHHHHHHH
T ss_pred hcCCccCCHHHHHHHHHHHHHHH
Confidence 643 2345566777777653
No 7
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=38.70 E-value=68 Score=26.16 Aligned_cols=104 Identities=15% Similarity=0.225 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHhhh---------cchh-HHHHHHHHHhHHHHHHHhhhCccchhhHHHHHHHHHHcCCCCCCCchhhH
Q 030075 44 PFLHLCNLVLQVLDKI---------GPTM-LVLRQDIHQNIQRLEKFCELDPSKYANVVEILKKEASEGNARKKTSCSKA 113 (183)
Q Consensus 44 ~fl~a~~~l~~~fd~L---------G~~F-~fv~~Dv~~nI~kL~~~~~~~~~~~~TL~~mv~~E~~~g~~~k~~S~tr~ 113 (183)
++..-|.+|+.++|.. ..+| .-.+.|+-.-+.-+.. .+..+-..=.+.-.|+......++.-+.|..
T Consensus 96 EL~~iC~dil~lld~~Lip~a~~~eskVFY~KmKGDyyRYlAE~~~---g~~r~~~~e~a~~aY~~A~~iA~~~L~pthP 172 (236)
T 3iqu_A 96 ELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVAT---GDDKKRIIDSARSAYQEAMDISKKEMPPTNP 172 (236)
T ss_dssp HHHHHHHHHHHHHHTTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCC---STTHHHHHHHHHHHHHHHHHHHHHHSCTTCH
T ss_pred HHHHHHHHHHHHHHHhcCccCCchHHHHHHHHhhhhHHHHHHHhcC---chHHHHHHHHHHHHHHHHHHHHHhhCCCCCc
Confidence 5778899999999985 1245 3356666543322211 1111000111222222222211111222333
Q ss_pred HHHHHhHHHHHHHHHHHHHcCCCCcHHHHHHHHHHhhhcc
Q 030075 114 FLWLTRSLDFMVALLQRLAKDPGQKMEQAVEESYNIALKP 153 (183)
Q Consensus 114 LLwL~RaL~Fi~~fl~~l~~~~~~~l~~~a~~AY~~tL~~ 153 (183)
+||-=+|+|. +|+-.++.+|+ ..-.+|++|++.+.+.
T Consensus 173 -irLGLaLNfS-VFyyEiln~~~-~Ac~lAk~Afd~Ai~e 209 (236)
T 3iqu_A 173 -IRLGLALNFS-VFHYEIANSPE-EAISLAKTTFDEAMAD 209 (236)
T ss_dssp -HHHHHHHHHH-HHHHHTSSCHH-HHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHH-HHHHHHcCCHH-HHHHHHHHHHHHHHHH
Confidence 7899999995 77888877654 4566788888887653
No 8
>1mdy_A Protein (MYOD BHLH domain); protein-DNA complex, transcription/DNA complex; HET: DNA; 2.80A {Mus musculus} SCOP: a.38.1.1 PDB: 1mdy_B*
Probab=34.10 E-value=98 Score=20.20 Aligned_cols=40 Identities=20% Similarity=0.244 Sum_probs=26.6
Q ss_pred hHHHHHHHHHHhhhhccCCCCCCCCCCCCCChHHHHHHHHHHHHHHh
Q 030075 11 SSEIRSAIEELSMFIKLKPKDNLDAPRIHIPTKPFLHLCNLVLQVLD 57 (183)
Q Consensus 11 ~~~~~~a~eel~~~~~~~~~~~~~~~~~~I~~~~fl~a~~~l~~~fd 57 (183)
...|-+||++|-..+| ..++..++=-+-|..+-+.+..+.
T Consensus 24 ~~~iN~af~~LR~~iP-------~~~~~KlSKi~tLr~Ai~YI~~L~ 63 (68)
T 1mdy_A 24 LSKVNEAFETLKRSTS-------SNPNQRLPKVEILRNAIRYIEGLQ 63 (68)
T ss_dssp HHHHHHHHHHHHTTSC-------SCTTSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcC-------CCCCCCCCHHHHHHHHHHHHHHHH
Confidence 5678999999999886 234556665566666555554443
No 9
>4egw_A Magnesium transport protein CORA; magnesium transporter, magnesium binding, metal transp; 2.50A {Methanocaldococcus jannaschii}
Probab=28.01 E-value=2.3e+02 Score=22.56 Aligned_cols=82 Identities=16% Similarity=0.174 Sum_probs=53.1
Q ss_pred HHHhhhcchhHHHHHHHHHhHHHHHHHhhhCccchhhHHHHHHHHHHcCCCCCCCchhhHHHHHHhHHHHHHHHHHHHHc
Q 030075 54 QVLDKIGPTMLVLRQDIHQNIQRLEKFCELDPSKYANVVEILKKEASEGNARKKTSCSKAFLWLTRSLDFMVALLQRLAK 133 (183)
Q Consensus 54 ~~fd~LG~~F~fv~~Dv~~nI~kL~~~~~~~~~~~~TL~~mv~~E~~~g~~~k~~S~tr~LLwL~RaL~Fi~~fl~~l~~ 133 (183)
.++|.+-..+.++-..+...++.|++..-.++. -..++++... -+.|+.|+|++.-....+..|..
T Consensus 160 ~lld~ivd~y~~~l~~i~~~id~lE~~l~~~~~-~~~l~~i~~l-------------rr~l~~lrr~l~p~~~vl~~L~~ 225 (280)
T 4egw_A 160 HILNEITRSYSRILMNLEDELEELEDKLLAGYD-REVMEKILGL-------------RKTLVYFHKSLIANRDVLVLLKR 225 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCC-HHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-hhHHHHHHHH-------------HHHHHHHHHHHhhHHHHHHHHHh
Confidence 445555555567778888899999887655444 2455555543 35678899999999999999876
Q ss_pred CCC----CcHHHHHHHHHHh
Q 030075 134 DPG----QKMEQAVEESYNI 149 (183)
Q Consensus 134 ~~~----~~l~~~a~~AY~~ 149 (183)
... +....-.++.|+.
T Consensus 226 ~~~~~~~~~~~~~l~Dv~dh 245 (280)
T 4egw_A 226 KYLPITTKEDRENFEDLYYD 245 (280)
T ss_dssp SCCSSCCHHHHHHHHHHHHH
T ss_pred cCcccCCHHHHHHHHHHHHH
Confidence 543 2333344444443
No 10
>2f6m_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomes, trafficking complex, vacuole protei sorting, ESCRT protein complexes; HET: DDQ; 2.10A {Saccharomyces cerevisiae} SCOP: a.2.17.1 PDB: 2f66_A*
Probab=27.65 E-value=63 Score=21.26 Aligned_cols=32 Identities=25% Similarity=0.369 Sum_probs=26.9
Q ss_pred HHHHHHHHHhhhhccCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 030075 13 EIRSAIEELSMFIKLKPKDNLDAPRIHIPTKPFLHLCNLVLQ 54 (183)
Q Consensus 13 ~~~~a~eel~~~~~~~~~~~~~~~~~~I~~~~fl~a~~~l~~ 54 (183)
.+.|+|..|..-+ ..+.|+++.|++-.+.+..
T Consensus 17 AieDaiy~L~~aL----------~~g~I~l~~ylK~vR~LaR 48 (65)
T 2f6m_A 17 ALTDTIEALSRML----------HRGTIPLDTFVKQGRELAR 48 (65)
T ss_dssp HHHHHHHHHHHHH----------HHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH----------HcCCCCHHHHHHHHHHHHH
Confidence 5788999999988 3688999999999887764
No 11
>2bbh_A Divalent cation transport-related protein; transporter, Mg, membrane, structural genomics, structural G consortium, SGC; HET: DMU; 1.85A {Thermotoga maritima} SCOP: d.328.1.1
Probab=22.79 E-value=2.4e+02 Score=22.10 Aligned_cols=84 Identities=17% Similarity=0.224 Sum_probs=41.6
Q ss_pred HHHHhhhcchhHHHHHHHHHhHHHHHHHhhhCccchhhHHHHHHHHHHcCCCCCCCchhhHHHHHHhHHHHHHHHHHHHH
Q 030075 53 LQVLDKIGPTMLVLRQDIHQNIQRLEKFCELDPSKYANVVEILKKEASEGNARKKTSCSKAFLWLTRSLDFMVALLQRLA 132 (183)
Q Consensus 53 ~~~fd~LG~~F~fv~~Dv~~nI~kL~~~~~~~~~~~~TL~~mv~~E~~~g~~~k~~S~tr~LLwL~RaL~Fi~~fl~~l~ 132 (183)
..++|.+=..+..+-.++...++.|++..-.++. -..+..+... -+.++.|+|++.=....+..|.
T Consensus 174 ~~lld~ivd~y~~~l~~i~~~id~lE~~v~~~~~-~~~l~~l~~l-------------rr~l~~lrr~l~p~~~vl~~L~ 239 (269)
T 2bbh_A 174 YSLIDALVDDYFVLLEKIDDEIDVLEEEVLERPE-KETVQRTHQL-------------KRNLVELRKTIWPLREVLSSLY 239 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCC--------CHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-HHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHH
Confidence 3555555555667778888888888875433332 1344444433 3556888888888888887776
Q ss_pred cCC----CCcHHHHHHHHHHhh
Q 030075 133 KDP----GQKMEQAVEESYNIA 150 (183)
Q Consensus 133 ~~~----~~~l~~~a~~AY~~t 150 (183)
... ++....-.++.|+.+
T Consensus 240 ~~~~~~~~~~~~~~lrDv~dh~ 261 (269)
T 2bbh_A 240 RDVPPLIEKETVPYFRDVYDHT 261 (269)
T ss_dssp HHHHHHTC--------------
T ss_pred hcCCccCCHHHHHHHHHHHHHH
Confidence 431 223334455555543
No 12
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=21.63 E-value=1.7e+02 Score=23.88 Aligned_cols=99 Identities=17% Similarity=0.314 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHHhhh-------c----chh-HHHHHHHHHhHHHHHH------HhhhCccchhhHHHHHHHHHHcCCC
Q 030075 43 KPFLHLCNLVLQVLDKI-------G----PTM-LVLRQDIHQNIQRLEK------FCELDPSKYANVVEILKKEASEGNA 104 (183)
Q Consensus 43 ~~fl~a~~~l~~~fd~L-------G----~~F-~fv~~Dv~~nI~kL~~------~~~~~~~~~~TL~~mv~~E~~~g~~ 104 (183)
.++..-|.+|+.++|.. | .+| .-.+.|+-.-+.-+.. ..+.....|..-.++...+
T Consensus 91 ~EL~~iC~dil~lld~~Lip~a~~~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~~~a~~aY~~A~~iA~~~------ 164 (248)
T 3uzd_A 91 KELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEH------ 164 (248)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH------
T ss_pred HHHHHHHHhHHHHHHHhcCCcCCCcchhHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhh------
Confidence 35777899999999875 2 234 3355565543322210 0001112233222222221
Q ss_pred CCCCchhhHHHHHHhHHHHHHHHHHHHHcCCCCcHHHHHHHHHHhhhcc
Q 030075 105 RKKTSCSKAFLWLTRSLDFMVALLQRLAKDPGQKMEQAVEESYNIALKP 153 (183)
Q Consensus 105 ~k~~S~tr~LLwL~RaL~Fi~~fl~~l~~~~~~~l~~~a~~AY~~tL~~ 153 (183)
-+.|.. +||-=+|+|. +|+-.++.+|+ ..-.+|++|++.+.+.
T Consensus 165 ---L~pthP-irLGLaLNfS-VFyYEIln~~~-~Ac~lAk~Afd~Ai~e 207 (248)
T 3uzd_A 165 ---MQPTHP-IRLGLALNYS-VFYYEIQNAPE-QACHLAKTAFDDAIAE 207 (248)
T ss_dssp ---SCTTCH-HHHHHHHHHH-HHHHHTSCCHH-HHHHHHHHHHHHHHHT
T ss_pred ---CCCCCc-HHHHHHHHHH-HHHHHHcCCHH-HHHHHHHHHHHHHHHH
Confidence 122333 7899999995 77888877654 4567788899887654
No 13
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=21.32 E-value=2.1e+02 Score=25.13 Aligned_cols=35 Identities=11% Similarity=0.111 Sum_probs=25.1
Q ss_pred cchhHHHHHHHHHhHHHHHHHhhhCccchhhHHHH
Q 030075 60 GPTMLVLRQDIHQNIQRLEKFCELDPSKYANVVEI 94 (183)
Q Consensus 60 G~~F~fv~~Dv~~nI~kL~~~~~~~~~~~~TL~~m 94 (183)
..+++=+..|+..+|..|++.....-.....|+..
T Consensus 108 dn~~~e~s~eLe~~i~~lk~~V~~q~~~ir~Lq~~ 142 (390)
T 1deq_A 108 DNTFKQINEDLRSRIEILRRKVIEQVQRINLLQKN 142 (390)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 34577788899999999988776544455566665
No 14
>1vp7_A Exodeoxyribonuclease VII small subunit; NP_881400.1, joint center for structural genomics, PSI, protein structure initiative; 2.40A {Bordetella pertussis tohama I} SCOP: a.7.13.1
Probab=20.46 E-value=1.3e+02 Score=21.41 Aligned_cols=53 Identities=13% Similarity=0.191 Sum_probs=36.6
Q ss_pred HHHHHHHHhhhhccCCCCCCCCCCCCCChHHHHHHHHHHHHHHhhhcchhHHHHHHHHHhHHHH
Q 030075 14 IRSAIEELSMFIKLKPKDNLDAPRIHIPTKPFLHLCNLVLQVLDKIGPTMLVLRQDIHQNIQRL 77 (183)
Q Consensus 14 ~~~a~eel~~~~~~~~~~~~~~~~~~I~~~~fl~a~~~l~~~fd~LG~~F~fv~~Dv~~nI~kL 77 (183)
+..++++|-..|. +-.++++++++=++.+..=+.+....-... .++..+|++|
T Consensus 32 FEeal~eLEeIV~-------~LE~gel~LEesl~lyeeG~~L~k~C~~~L----~~AE~kV~~L 84 (100)
T 1vp7_A 32 FETALAELESLVS-------AMENGTLPLEQSLSAYRRGVELARVCQDRL----AQAEQQVKVL 84 (100)
T ss_dssp HHHHHHHHHHHHH-------HHHTTCSCHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-------HHHcCCCCHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 6777888877775 557888999999988888777775443333 2344555555
No 15
>1xpp_A TA1416, DNA-directed RNA polymerase subunit L; structural genomics, protein structure initiative, MCSG; 1.60A {Thermoplasma acidophilum} SCOP: d.74.3.2
Probab=20.20 E-value=77 Score=22.97 Aligned_cols=31 Identities=10% Similarity=0.132 Sum_probs=26.1
Q ss_pred CChHHHHHHHHHHHHHHhhhcchhHHHHHHH
Q 030075 40 IPTKPFLHLCNLVLQVLDKIGPTMLVLRQDI 70 (183)
Q Consensus 40 I~~~~fl~a~~~l~~~fd~LG~~F~fv~~Dv 70 (183)
++.+.+.+|++.|...++.|...|.-...++
T Consensus 73 ~p~eaL~~al~~L~~~~~~l~~~f~~a~~~~ 103 (115)
T 1xpp_A 73 KPQSAIKRAVRKLSKLYEDLGTQFQKEFQRY 103 (115)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3999999999999999999988886555444
Done!