BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030076
(183 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|F4JIP6|LPXD2_ARATH Probable UDP-3-O-acylglucosamine N-acyltransferase 2, mitochondrial
OS=Arabidopsis thaliana GN=LPXD2 PE=3 SV=1
Length = 304
Score = 222 bits (566), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 106/155 (68%), Positives = 126/155 (81%)
Query: 27 FSTKSDIESRQQFQKWHNGGGIFHQSACIDSTVLIEVGAIVHSKAVLGANVCIGSGTVVG 86
T I ++ F +W NGGG H SA I S+ L+E GA+VH KAVLGA V +GSGTV+G
Sbjct: 61 LKTGGGIIVKEGFLRWENGGGTCHSSAQIYSSALVEFGAVVHEKAVLGAEVHVGSGTVIG 120
Query: 87 PAVTIGQSTNIGFNVALSNCIIGDSCIIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARI 146
P+V IG ST IG+NV++SNC IGDSC+IHNGVCIGQDGFGF+VDEHGNM+KKPQ LN +I
Sbjct: 121 PSVDIGPSTRIGYNVSISNCSIGDSCVIHNGVCIGQDGFGFYVDEHGNMVKKPQTLNVKI 180
Query: 147 GNHVEIGANSCIDRGSWRDTVIGDHSKIDNLVQVG 181
GN VEIGAN+CIDRGSWR+TVI D +KIDNLVQ+G
Sbjct: 181 GNRVEIGANTCIDRGSWRETVIEDDTKIDNLVQIG 215
>sp|F4JGP6|LPXD1_ARATH Probable UDP-3-O-acylglucosamine N-acyltransferase 1, mitochondrial
OS=Arabidopsis thaliana GN=LPXD1 PE=2 SV=1
Length = 330
Score = 207 bits (528), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/157 (64%), Positives = 123/157 (78%), Gaps = 6/157 (3%)
Query: 25 NLFSTKSDIESRQQFQKWHNGGGIFHQSACIDSTVLIEVGAIVHSKAVLGANVCIGSGTV 84
+L T S + F +W NGGG++H+SA IDS+ L+E GA+VH +A+LGA V IGS TV
Sbjct: 66 DLLETSSGGNVEKGFLRWRNGGGMYHRSALIDSSALVEFGAVVHQEAILGAEVHIGSNTV 125
Query: 85 VGPAVTIGQSTNIGFNVALSNCIIGDSCIIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNA 144
+G +V IG ST IG NC IGD C+IHNGVCIGQDGFGF+VD++GNM+KKPQ LN
Sbjct: 126 IGSSVKIGPSTKIG------NCSIGDLCVIHNGVCIGQDGFGFYVDDNGNMVKKPQTLNV 179
Query: 145 RIGNHVEIGANSCIDRGSWRDTVIGDHSKIDNLVQVG 181
+IGN VEIGAN+CIDRGSWRDTVIGD +KIDNLVQ+G
Sbjct: 180 KIGNRVEIGANTCIDRGSWRDTVIGDDTKIDNLVQIG 216
>sp|Q89KQ2|LPXD_BRAJA UDP-3-O-acylglucosamine N-acyltransferase OS=Bradyrhizobium
japonicum (strain USDA 110) GN=lpxD PE=3 SV=1
Length = 355
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/148 (49%), Positives = 89/148 (60%), Gaps = 7/148 (4%)
Query: 40 QKWHNGGGIFHQSACIDSTVLIEVGAIVHSKAVLGANVCIGSGTVVG------PAVTIGQ 93
Q W GI SA ID T +E G IV AV+GA+V IGSGTVVG P V IG+
Sbjct: 111 QSWVGNDGI-APSAIIDPTARLEDGVIVDPLAVIGADVEIGSGTVVGVGAVIGPGVKIGR 169
Query: 94 STNIGFNVALSNCIIGDSCIIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIG 153
N+G A+ +IG+ +IH G IGQDG+GF LK PQ I N+VE+G
Sbjct: 170 DCNVGARTAIQCALIGNDVLIHPGCSIGQDGYGFIFFGPEGHLKVPQTGRVLIQNNVEVG 229
Query: 154 ANSCIDRGSWRDTVIGDHSKIDNLVQVG 181
A + IDRGS RDTVIG+ +KIDN VQ+G
Sbjct: 230 AGTTIDRGSLRDTVIGEGTKIDNQVQIG 257
>sp|A5EK46|LPXD_BRASB UDP-3-O-acylglucosamine N-acyltransferase OS=Bradyrhizobium sp.
(strain BTAi1 / ATCC BAA-1182) GN=lpxD PE=3 SV=1
Length = 355
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 94/170 (55%), Gaps = 9/170 (5%)
Query: 18 QDFGRFCNLFSTKSDIESRQQFQKWHNGGGIFHQSACIDSTVLIEVGAIVHSKAVLGANV 77
Q F F L T R Q W GI Q A ID + +E G +V AV+GA+V
Sbjct: 91 QPFRAFVQLARTMHADALRPQ--SWFGCDGISSQ-AIIDPSARLEDGVVVEPLAVIGAHV 147
Query: 78 CIGSGTVVG------PAVTIGQSTNIGFNVALSNCIIGDSCIIHNGVCIGQDGFGFFVDE 131
IG+GT+VG P V IG+ N+G + +IG+ +IH IGQDG+GF
Sbjct: 148 EIGAGTIVGAGAVIGPHVKIGRDCNVGARTVIQCALIGNDVLIHPACAIGQDGYGFIFFG 207
Query: 132 HGNMLKKPQLLNARIGNHVEIGANSCIDRGSWRDTVIGDHSKIDNLVQVG 181
G +K PQ I NHVEIGA + IDRGS RDTVIG+ +KIDN VQ+G
Sbjct: 208 PGGHVKVPQTGRVIIQNHVEIGAGTTIDRGSLRDTVIGEGTKIDNQVQIG 257
>sp|A4YVF7|LPXD_BRASO UDP-3-O-acylglucosamine N-acyltransferase OS=Bradyrhizobium sp.
(strain ORS278) GN=lpxD PE=3 SV=1
Length = 355
Score = 116 bits (291), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 87/148 (58%), Gaps = 7/148 (4%)
Query: 40 QKWHNGGGIFHQSACIDSTVLIEVGAIVHSKAVLGANVCIGSGTVVG------PAVTIGQ 93
Q W GI Q A ID T +E G IV AV+GA+V IG+GT+VG P V +G+
Sbjct: 111 QPWFGDDGISPQ-AIIDPTARLEDGVIVEPLAVIGAHVEIGAGTIVGAGAVIGPHVKVGR 169
Query: 94 STNIGFNVALSNCIIGDSCIIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIG 153
N+G + +IG+ +IH G IGQDG+GF K PQ I NHVE+G
Sbjct: 170 DCNVGARTVIQCSLIGNDVLIHPGCSIGQDGYGFIFFGANGHTKVPQTGRVIIQNHVEVG 229
Query: 154 ANSCIDRGSWRDTVIGDHSKIDNLVQVG 181
A + IDRGS RDTVIG+ +KIDN VQ+G
Sbjct: 230 AGTTIDRGSLRDTVIGEGTKIDNQVQIG 257
>sp|Q3SMZ4|LPXD2_NITWN UDP-3-O-acylglucosamine N-acyltransferase 2 OS=Nitrobacter
winogradskyi (strain Nb-255 / ATCC 25391) GN=lpxD2 PE=3
SV=1
Length = 341
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/132 (50%), Positives = 86/132 (65%), Gaps = 3/132 (2%)
Query: 50 HQSACIDSTVLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGFNVALSNCIIG 109
H SA + V I+ GA V A +G CIGS V+GP+V IG++ IG NV ++ ++G
Sbjct: 123 HASAIVGHGVTIDPGASVGPNARIGGFTCIGSNAVIGPSVRIGRNCYIGANVTVAYAVVG 182
Query: 110 DSCIIHNGVCIGQDGFGF-FVDEHGNMLKKPQLLNARIGNHVEIGANSCIDRGSWRDTVI 168
D IIH G IGQDGFGF F+ G +K PQ+ I + VE+GAN+ IDRGS R TVI
Sbjct: 183 DRVIIHPGTSIGQDGFGFTFLG--GKWVKVPQVGGVIIQDDVEVGANTTIDRGSMRATVI 240
Query: 169 GDHSKIDNLVQV 180
G+ +K+DNLVQV
Sbjct: 241 GEGTKLDNLVQV 252
>sp|Q11IJ0|LPXD_MESSB UDP-3-O-acylglucosamine N-acyltransferase OS=Mesorhizobium sp.
(strain BNC1) GN=lpxD PE=3 SV=2
Length = 350
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 94/176 (53%), Gaps = 13/176 (7%)
Query: 12 LTKTYKQDFGRFCNLFSTKSDIESRQQFQKWHNGGGIFHQSACIDSTVLIEVGAIVHSKA 71
++ +Q F L +++ R Q G A I ++E GAI+ + A
Sbjct: 88 VSPKPQQAFAMVARLLFPEAN---RPQPVTGETG---VSPRAVIAEGAVVEDGAIIEAGA 141
Query: 72 VLGANVCIGSGTVVGPAVTIGQSTNIG------FNVALSNCIIGDSCIIHNGVCIGQDGF 125
V+G +G GT+VGP IG +IG NV L +IGD IIH G IGQDGF
Sbjct: 142 VIGVGASVGRGTIVGPNTVIGARCSIGRDGYVGPNVMLQYAVIGDRVIIHPGAQIGQDGF 201
Query: 126 GFFVDEHGNMLKKPQLLNARIGNHVEIGANSCIDRGSWRDTVIGDHSKIDNLVQVG 181
GF +G K PQ+ I + VEIGAN+ IDRG+ DT+IG+ +KIDNLVQ+G
Sbjct: 202 GFLPGPNG-FEKNPQIGRVIIQDDVEIGANTTIDRGALSDTIIGEGTKIDNLVQIG 256
>sp|A6U8L0|LPXD_SINMW UDP-3-O-acylglucosamine N-acyltransferase OS=Sinorhizobium medicae
(strain WSM419) GN=lpxD PE=3 SV=1
Length = 354
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/135 (48%), Positives = 85/135 (62%), Gaps = 6/135 (4%)
Query: 53 ACIDSTVLIEVGAIVHSKAVLGANVCIGSGT------VVGPAVTIGQSTNIGFNVALSNC 106
A +DST +E G V AV+GA IGSGT ++GP V IG+ I V++
Sbjct: 123 AFVDSTARLEAGVEVEPMAVIGAGAEIGSGTRIAAGAMIGPGVRIGRDCTISAGVSILCA 182
Query: 107 IIGDSCIIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIGANSCIDRGSWRDT 166
+IG++ IIH G IGQDGFG+ G M+K Q+ I +HVEIGAN+ IDRG+ DT
Sbjct: 183 LIGNNVIIHPGTRIGQDGFGYAPGPTGGMIKIVQVGRVIIQDHVEIGANTTIDRGTMDDT 242
Query: 167 VIGDHSKIDNLVQVG 181
VIG+ +KIDNLVQ+G
Sbjct: 243 VIGEGTKIDNLVQIG 257
>sp|Q2W4D3|LPXD_MAGSA UDP-3-O-acylglucosamine N-acyltransferase OS=Magnetospirillum
magneticum (strain AMB-1 / ATCC 700264) GN=lpxD PE=3
SV=1
Length = 339
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 90/170 (52%), Gaps = 7/170 (4%)
Query: 12 LTKTYKQDFGRFCNLFSTKSDIESRQQFQKWHNGGGIFHQSACIDSTVLIEVGAIVHSKA 71
L+ + + R F E W SA + IE GA++ + A
Sbjct: 88 LSPDPYRAYARIAQAFYPNPAPEPWVAPTAW------VDASAAVGEGCRIEPGAVIGAGA 141
Query: 72 VLGANVCIGSGTVVGPAVTIGQSTNIGFNVALSNCIIGDSCIIHNGVCIGQDGFGFFVDE 131
+GA IG+ V+G V +G IG N +S+ ++G I+ G IGQDGFGF +
Sbjct: 142 RIGARCRIGANVVIGQGVVLGDDCTIGANATVSHALVGSRVNIYPGARIGQDGFGFAMGP 201
Query: 132 HGNMLKKPQLLNARIGNHVEIGANSCIDRGSWRDTVIGDHSKIDNLVQVG 181
G+ LK PQL IGN+VEIGAN+ IDRG+ DTVIGD S IDNLVQ+G
Sbjct: 202 QGH-LKVPQLGRVLIGNNVEIGANTTIDRGAGPDTVIGDGSMIDNLVQIG 250
>sp|Q8UFL5|LPXD_AGRT5 UDP-3-O-acylglucosamine N-acyltransferase OS=Agrobacterium
tumefaciens (strain C58 / ATCC 33970) GN=lpxD PE=3 SV=1
Length = 355
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/137 (45%), Positives = 86/137 (62%), Gaps = 7/137 (5%)
Query: 51 QSACIDSTVLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGFNVALSN----- 105
+A +D + +E G IV AV+GA V IG+GT +GP V IG IG + ++
Sbjct: 122 PAAYVDPSAKLEPGVIVEPMAVIGAGVHIGAGTRIGPGVVIGSDVQIGRDCTIAGGASIL 181
Query: 106 -CIIGDSCIIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIGANSCIDRGSWR 164
++G++ IIHNG IGQDGFG+ G MLK Q+ I +HVE+GAN+ IDRG+
Sbjct: 182 AALLGNNVIIHNGARIGQDGFGYAPGPRG-MLKIVQIGRVIIQDHVEVGANTTIDRGTMD 240
Query: 165 DTVIGDHSKIDNLVQVG 181
DTVIG+ +KIDN VQ+G
Sbjct: 241 DTVIGEGTKIDNQVQIG 257
>sp|A8I485|LPXD_AZOC5 UDP-3-O-acylglucosamine N-acyltransferase OS=Azorhizobium
caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571)
GN=lpxD PE=3 SV=1
Length = 357
Score = 112 bits (280), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 91/148 (61%), Gaps = 4/148 (2%)
Query: 36 RQQFQKWHNG---GGIFHQSACIDSTVLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTIG 92
R Q H G G H +A +++ V ++ GA++ A +GA I + VVG V IG
Sbjct: 110 RPQPVFGHTGIAPGAFIHPTASLEAGVTVDPGAVIGPGAEVGAGSVICANAVVGAGVRIG 169
Query: 93 QSTNIGFNVALSNCIIGDSCIIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEI 152
+ + IG V+LS+ ++G+ I+H G IGQDGFG+ G+ LK PQ+ + + VE+
Sbjct: 170 RDSTIGAGVSLSHALVGNRVIVHAGARIGQDGFGYQPGPGGH-LKVPQIGRVVLQDDVEV 228
Query: 153 GANSCIDRGSWRDTVIGDHSKIDNLVQV 180
GA S IDRG+ RDTVIG+ +KIDNLVQ+
Sbjct: 229 GAGSTIDRGALRDTVIGEGTKIDNLVQI 256
>sp|C3MBR0|LPXD_RHISN UDP-3-O-acylglucosamine N-acyltransferase OS=Rhizobium sp. (strain
NGR234) GN=lpxD PE=3 SV=1
Length = 354
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/135 (47%), Positives = 83/135 (61%), Gaps = 6/135 (4%)
Query: 53 ACIDSTVLIEVGAIVHSKAVLGANVCIGSGT------VVGPAVTIGQSTNIGFNVALSNC 106
A ID T +E G V AV+GA IGSGT V+GP V IG+ I ++
Sbjct: 123 AFIDPTARLEPGVEVEPTAVVGAGAEIGSGTRIAAGAVIGPQVRIGRDCTISAGASILCA 182
Query: 107 IIGDSCIIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIGANSCIDRGSWRDT 166
+IG++ IIH G IGQDGFG+ G M+K Q+ I +HVEIGAN+ +DRG+ DT
Sbjct: 183 LIGNNVIIHPGARIGQDGFGYAPGPKGGMIKIVQVGRVIIQDHVEIGANTTVDRGTMDDT 242
Query: 167 VIGDHSKIDNLVQVG 181
VIG+ +KIDNLVQ+G
Sbjct: 243 VIGEGTKIDNLVQIG 257
>sp|Q92Q47|LPXD_RHIME UDP-3-O-acylglucosamine N-acyltransferase OS=Rhizobium meliloti
(strain 1021) GN=lpxD PE=3 SV=1
Length = 354
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 81/136 (59%), Gaps = 6/136 (4%)
Query: 52 SACIDSTVLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGFNVALSN------ 105
A +D T +E G V AV+GA IGSGT + IGQ IG + +S
Sbjct: 122 EAFVDPTARLEAGVEVEPMAVIGAGAEIGSGTRIAAGAMIGQGVRIGRDCTISAGASILC 181
Query: 106 CIIGDSCIIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIGANSCIDRGSWRD 165
+IG++ IIH G IGQDGFG+ G M+K Q+ I +HVEIGAN+ IDRG+ D
Sbjct: 182 ALIGNNVIIHPGARIGQDGFGYAPGPKGGMIKIVQVGRVIIQDHVEIGANTTIDRGTMDD 241
Query: 166 TVIGDHSKIDNLVQVG 181
TVIG+ +KIDNLVQ+G
Sbjct: 242 TVIGEGTKIDNLVQIG 257
>sp|B1LTP6|LPXD_METRJ UDP-3-O-acylglucosamine N-acyltransferase OS=Methylobacterium
radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831)
GN=lpxD PE=3 SV=1
Length = 353
Score = 110 bits (276), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 83/135 (61%), Gaps = 2/135 (1%)
Query: 46 GGIFHQSACIDSTVLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGFNVALSN 105
G H A ++ V ++ GA++ A +GA +G V+GP V IG+ IG LS+
Sbjct: 123 GAHVHPEARLEDGVTVDPGAVIGPGAEIGAGTVVGPNAVIGPGVRIGRDCAIGAGTTLSH 182
Query: 106 CIIGDSCIIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIGANSCIDRGSWRD 165
++G+ I+H G +GQDGFGF + LK PQ+ + + VEIGAN+ +DRG+ RD
Sbjct: 183 ALLGNRVIVHPGARLGQDGFGFAMGA--THLKVPQVGRVIVQDDVEIGANTTVDRGASRD 240
Query: 166 TVIGDHSKIDNLVQV 180
TVIG+ +KIDNLVQ+
Sbjct: 241 TVIGEGTKIDNLVQI 255
>sp|Q3SRI1|LPXD1_NITWN UDP-3-O-acylglucosamine N-acyltransferase 1 OS=Nitrobacter
winogradskyi (strain Nb-255 / ATCC 25391) GN=lpxD1 PE=3
SV=1
Length = 362
Score = 110 bits (274), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 81/134 (60%)
Query: 48 IFHQSACIDSTVLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGFNVALSNCI 107
+ H SA ++ V+I+ A++ +G IGSG V+GP V IG+ N+G + +
Sbjct: 124 VIHPSAYLEDEVVIDPLAVIGPDVQIGRGSVIGSGAVIGPGVRIGRDCNVGAGTTIQATL 183
Query: 108 IGDSCIIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIGANSCIDRGSWRDTV 167
IG++ +IH G IGQDG+GF +K PQ I N VEIGA + IDRGS RDTV
Sbjct: 184 IGNNVLIHPGCHIGQDGYGFIFFGSEGHVKVPQTGRVLIQNDVEIGAGTTIDRGSLRDTV 243
Query: 168 IGDHSKIDNLVQVG 181
IG+ +KIDN VQ+G
Sbjct: 244 IGEGTKIDNQVQIG 257
>sp|A1VN50|LPXD_POLNA UDP-3-O-acylglucosamine N-acyltransferase OS=Polaromonas
naphthalenivorans (strain CJ2) GN=lpxD PE=3 SV=1
Length = 355
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 85/162 (52%), Gaps = 11/162 (6%)
Query: 27 FSTKSDIESRQQFQKWHNGGGIFHQSACIDSTVLIEVGAIVHSKAVLGANVCIGSGTVVG 86
F+ + + RQ F H SACID +I + + A + A IG G +
Sbjct: 88 FALVTQLWKRQHFP---GAAPAIHASACIDPAAIISPHVSIGAFACIAAGAVIGEGARIA 144
Query: 87 PAVTIGQSTNIGFNVALS-------NCIIGDSCIIHNGVCIGQDGFGFFVDEHGNMLKKP 139
IG + +G N LS +C IG+ CIIH G IG DGFGF G +K
Sbjct: 145 EHCVIGANAIVGANSRLSARVTVADDCRIGERCIIHPGAVIGADGFGF-APHDGQWVKIE 203
Query: 140 QLLNARIGNHVEIGANSCIDRGSWRDTVIGDHSKIDNLVQVG 181
QL RIGN VEIGAN+CIDRG+ +DTVI D K+DNLVQ+
Sbjct: 204 QLGAVRIGNDVEIGANTCIDRGALQDTVIEDGVKLDNLVQIA 245
>sp|Q98MC4|LPXD_RHILO UDP-3-O-acylglucosamine N-acyltransferase OS=Rhizobium loti (strain
MAFF303099) GN=lpxD PE=3 SV=1
Length = 351
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/134 (46%), Positives = 81/134 (60%), Gaps = 7/134 (5%)
Query: 53 ACIDSTVLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGFN------VALSNC 106
A ID T +E GAI+ + V+G V IGSGTV+ P IGQS IG + ++
Sbjct: 123 AHIDPTAHVEAGAIIEAGVVIGPGVSIGSGTVIAPNAVIGQSCQIGRDGYVGPGASIQYA 182
Query: 107 IIGDSCIIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIGANSCIDRGSWRDT 166
+IG+ IIH G IGQDGFGF G + PQ+ I + VEIG+NS +DRG+ DT
Sbjct: 183 LIGNRVIIHGGARIGQDGFGFVGGAKGPE-RVPQIGRVVIQDDVEIGSNSTVDRGAMSDT 241
Query: 167 VIGDHSKIDNLVQV 180
+IG +KIDNLVQ+
Sbjct: 242 IIGQGTKIDNLVQI 255
>sp|Q1QMM8|LPXD_NITHX UDP-3-O-acylglucosamine N-acyltransferase OS=Nitrobacter
hamburgensis (strain X14 / DSM 10229) GN=lpxD PE=3 SV=1
Length = 361
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 82/134 (61%)
Query: 48 IFHQSACIDSTVLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGFNVALSNCI 107
+ H SA ++ V+++ A++ +G IGSG V+GP V IG++ N+G + +
Sbjct: 124 VVHPSAHLEDAVVVDPLAVIGPGVEIGTGSVIGSGAVIGPGVRIGRNCNVGAGTTIQVAL 183
Query: 108 IGDSCIIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIGANSCIDRGSWRDTV 167
IG++ +IH G IGQDG+GF +K PQ I N VEIGA + IDRGS RDTV
Sbjct: 184 IGNNVLIHPGCHIGQDGYGFIFFGSEGHVKVPQTGRVLIQNDVEIGAGTTIDRGSLRDTV 243
Query: 168 IGDHSKIDNLVQVG 181
IG+ +KIDN VQ+G
Sbjct: 244 IGEGTKIDNQVQIG 257
>sp|A7HY09|LPXD_PARL1 UDP-3-O-acylglucosamine N-acyltransferase OS=Parvibaculum
lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966)
GN=lpxD PE=3 SV=1
Length = 353
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 97/181 (53%), Gaps = 11/181 (6%)
Query: 1 MAVKRFVHYYRLTKTYKQDFGRFCNLFSTKSDIESRQQFQKWHNGGGIFHQSACIDSTVL 60
++ + + Y + + + D + F + +I R H +A + + V
Sbjct: 88 LSDQPYRAYALVAQIFHPDEAHGADTFGARGEIHPR----------ATVHPTAKLGTGVT 137
Query: 61 IEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGFNVALSNCIIGDSCIIHNGVCI 120
+E G + + +G N IG+ T VG T+G+ IG NV LS+ +GD ++H GV I
Sbjct: 138 LEPGVTIGAGVEIGNNTVIGTNTSVGKGCTVGKDCFIGPNVTLSHAHLGDRVMVHPGVRI 197
Query: 121 GQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIGANSCIDRGSWRDTVIGDHSKIDNLVQV 180
GQDGFGF + K PQL + + VEIGANS +DRG+ DTVIG+ +KIDNLVQ+
Sbjct: 198 GQDGFGFAMGLP-RHEKVPQLGRVIVQDDVEIGANSTVDRGAGPDTVIGEGTKIDNLVQI 256
Query: 181 G 181
G
Sbjct: 257 G 257
>sp|Q21WY0|LPXD_RHOFD UDP-3-O-acylglucosamine N-acyltransferase OS=Rhodoferax
ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118)
GN=lpxD PE=3 SV=1
Length = 329
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 92/178 (51%), Gaps = 33/178 (18%)
Query: 4 KRFVHYYRLTKTYKQDFGRFCNLFSTKSDIESRQQFQKWHNGGGIFHQSACIDSTVLIEV 63
+ ++++ R+T+ +K+ R R Q H SA ID
Sbjct: 79 QPYLYFARVTQLWKKSLPRTV-----------RPQI----------HPSAVIDPE----- 112
Query: 64 GAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGFNVALSNCIIGDSCIIHNGVCIGQD 123
A VH +A +GA I SG VG + +G NC+IG+ C++H+GV IG D
Sbjct: 113 -AFVHPRACIGALCVIESGASVGADTVLKSRVTVG-----ENCVIGERCLLHSGVVIGAD 166
Query: 124 GFGFFVDEHGNMLKKPQLLNARIGNHVEIGANSCIDRGSWRDTVIGDHSKIDNLVQVG 181
GFGF G K QL RIGN VEIGAN+CIDRG+ +DTVI D K+DNL+Q+G
Sbjct: 167 GFGF-APHAGAWEKIEQLGAVRIGNDVEIGANTCIDRGALQDTVIEDGVKLDNLIQIG 223
>sp|Q085D2|LPXD_SHEFN UDP-3-O-acylglucosamine N-acyltransferase OS=Shewanella
frigidimarina (strain NCIMB 400) GN=lpxD PE=3 SV=1
Length = 340
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/139 (45%), Positives = 83/139 (59%), Gaps = 8/139 (5%)
Query: 49 FHQSACIDSTVLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGFNVAL----- 103
H SA ID++ ++ GA + + AV+GANV +G +GP +G+S+ IG N L
Sbjct: 99 IHPSAQIDTSAILGDGAAIGANAVIGANVILGENVQIGPGCVVGESSIIGSNTRLWANVS 158
Query: 104 --SNCIIGDSCIIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIGANSCIDRG 161
N IG CI+H+G IG DGFG+ +E GN +K PQ RIGNHVEIGA + IDRG
Sbjct: 159 VYHNVHIGHDCIVHSGTVIGSDGFGY-ANERGNWVKIPQTGGVRIGNHVEIGACTSIDRG 217
Query: 162 SWRDTVIGDHSKIDNLVQV 180
+ T I D IDN VQ+
Sbjct: 218 ALSHTEIHDGVIIDNQVQI 236
>sp|Q215C1|LPXD2_RHOPB UDP-3-O-acylglucosamine N-acyltransferase 2 OS=Rhodopseudomonas
palustris (strain BisB18) GN=lpxD2 PE=3 SV=1
Length = 373
Score = 107 bits (268), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 97/189 (51%), Gaps = 11/189 (5%)
Query: 1 MAVKRFVHY-------YRLTKTYKQDFGRFCNLFSTKSDIESRQQFQKWH-NGGGIFHQS 52
+ +RF H R+ K Y+ L+ S + F G + H S
Sbjct: 71 LTTERFAHLAPESVAVLRIAKPYEAFVAVARRLY--PSALRPTSLFGTLGVAPGAVVHPS 128
Query: 53 ACIDSTVLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGFNVALSNCIIGDSC 112
A + + V ++ GA++ +A +G IG+ V+GP V IG IG +++ IGD
Sbjct: 129 AKLAAGVTVDPGAVIGPRAEIGKGSLIGANAVIGPHVKIGADCAIGAGCTVTHSEIGDRV 188
Query: 113 IIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIGANSCIDRGSWRDTVIGDHS 172
I+H G IGQDGFG+ +G+ K PQ+ I + VEIGA S IDRG RDTVIG +
Sbjct: 189 IVHPGSQIGQDGFGYISSANGHT-KVPQIGRVVIHDDVEIGAGSNIDRGGMRDTVIGQGT 247
Query: 173 KIDNLVQVG 181
KIDNL Q+G
Sbjct: 248 KIDNLCQIG 256
>sp|Q215E0|LPXD1_RHOPB UDP-3-O-acylglucosamine N-acyltransferase 1 OS=Rhodopseudomonas
palustris (strain BisB18) GN=lpxD1 PE=3 SV=1
Length = 358
Score = 107 bits (268), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 83/135 (61%), Gaps = 4/135 (2%)
Query: 48 IFHQSACIDSTVLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGFNVALSNCI 107
+ H +A ++ V ++ A++ + +GA IGSG V+ P V IG+ N+G + +
Sbjct: 124 VIHPTARLEDGVTVDPLAVIGPQVEIGAGSVIGSGAVLSPGVRIGRDCNVGAGTVIQFAL 183
Query: 108 IGDSCIIHNGVCIGQDGFGF-FVDEHGNMLKKPQLLNARIGNHVEIGANSCIDRGSWRDT 166
IG++ +IH G IGQDG+GF F + H K PQ I N VEIGA + IDRGS RDT
Sbjct: 184 IGNNVLIHPGCQIGQDGYGFIFAETH---QKVPQTGRVIIQNDVEIGAGTTIDRGSLRDT 240
Query: 167 VIGDHSKIDNLVQVG 181
VIG+ SKIDN VQ+G
Sbjct: 241 VIGEGSKIDNQVQIG 255
>sp|Q2K8X9|LPXD_RHIEC UDP-3-O-acylglucosamine N-acyltransferase OS=Rhizobium etli (strain
CFN 42 / ATCC 51251) GN=lpxD PE=3 SV=1
Length = 354
Score = 106 bits (264), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 85/136 (62%), Gaps = 7/136 (5%)
Query: 52 SACIDSTVLIEVGAIVHSKAVLGANVCIGSGT------VVGPAVTIGQSTNIGFNVALSN 105
SA ID + +E G IV AV+G + IG GT V+GP V IG+ +I ++
Sbjct: 122 SAVIDPSAKLEKGVIVEPLAVIGPHAEIGEGTRIGANSVIGPDVKIGRDCSIAAGASILC 181
Query: 106 CIIGDSCIIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIGANSCIDRGSWRD 165
+IG+ +IHNGV IGQDGFG+ G M+K Q+ I ++VEIGAN+ IDRG+ D
Sbjct: 182 ALIGNGVVIHNGVRIGQDGFGYAPGPRG-MIKIVQIGRVIIQDNVEIGANTTIDRGAMDD 240
Query: 166 TVIGDHSKIDNLVQVG 181
TVIG+ +KIDN VQ+G
Sbjct: 241 TVIGEGTKIDNQVQIG 256
>sp|Q1MH46|LPXD_RHIL3 UDP-3-O-acylglucosamine N-acyltransferase OS=Rhizobium
leguminosarum bv. viciae (strain 3841) GN=lpxD PE=3 SV=1
Length = 354
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 85/136 (62%), Gaps = 7/136 (5%)
Query: 52 SACIDSTVLIEVGAIVHSKAVLGANVCIGSGT------VVGPAVTIGQSTNIGFNVALSN 105
SA ID + +E G IV AV+GA+ IG GT ++GP V IG+ +I ++
Sbjct: 122 SAVIDPSARLEKGVIVEPMAVIGAHAEIGEGTRIGAHSIIGPNVKIGRDCSIAAGASIIC 181
Query: 106 CIIGDSCIIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIGANSCIDRGSWRD 165
++G+ IIHNG IGQDGFG+ G M+K Q+ I ++VEIGAN+ IDRG+ D
Sbjct: 182 ALLGNGVIIHNGARIGQDGFGYAPGPRG-MIKIVQIGRVIIQDNVEIGANTTIDRGAMDD 240
Query: 166 TVIGDHSKIDNLVQVG 181
TVIG+ +KIDN VQ+G
Sbjct: 241 TVIGEGTKIDNQVQIG 256
>sp|P0A3P5|LPXD_BRUSU UDP-3-O-acylglucosamine N-acyltransferase OS=Brucella suis biovar 1
(strain 1330) GN=lpxD PE=3 SV=1
Length = 351
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 89/147 (60%), Gaps = 8/147 (5%)
Query: 40 QKWHNGGGIFHQSACIDSTVLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGF 99
+ W GI +A I T IE GA V + AV+G+ V IG+GT++ IGQ+ IG
Sbjct: 111 ESWLGETGI-SPAAFIHPTAQIEDGATVEAGAVIGSGVTIGAGTLIAATAVIGQNCQIGR 169
Query: 100 N------VALSNCIIGDSCIIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIG 153
N V++ IG++ +H GV IGQDGFG+ G + K PQL I ++VEIG
Sbjct: 170 NSYIAPGVSVQCAFIGNNVSLHPGVRIGQDGFGYVPGAAG-LDKVPQLGRVIIQDNVEIG 228
Query: 154 ANSCIDRGSWRDTVIGDHSKIDNLVQV 180
AN+ +DRGS DTVIG+ +KIDNLVQ+
Sbjct: 229 ANTTVDRGSLDDTVIGEGTKIDNLVQI 255
>sp|B0CGV1|LPXD_BRUSI UDP-3-O-acylglucosamine N-acyltransferase OS=Brucella suis (strain
ATCC 23445 / NCTC 10510) GN=lpxD PE=3 SV=1
Length = 351
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 89/147 (60%), Gaps = 8/147 (5%)
Query: 40 QKWHNGGGIFHQSACIDSTVLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGF 99
+ W GI +A I T IE GA V + AV+G+ V IG+GT++ IGQ+ IG
Sbjct: 111 ESWLGETGI-SPAAFIHPTAQIEDGATVEAGAVIGSGVTIGAGTLIAATAVIGQNCQIGR 169
Query: 100 N------VALSNCIIGDSCIIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIG 153
N V++ IG++ +H GV IGQDGFG+ G + K PQL I ++VEIG
Sbjct: 170 NSYIAPGVSVQCAFIGNNVSLHPGVRIGQDGFGYVPGAAG-LDKVPQLGRVIIQDNVEIG 228
Query: 154 ANSCIDRGSWRDTVIGDHSKIDNLVQV 180
AN+ +DRGS DTVIG+ +KIDNLVQ+
Sbjct: 229 ANTTVDRGSLDDTVIGEGTKIDNLVQI 255
>sp|A5VQS5|LPXD_BRUO2 UDP-3-O-acylglucosamine N-acyltransferase OS=Brucella ovis (strain
ATCC 25840 / 63/290 / NCTC 10512) GN=lpxD PE=3 SV=1
Length = 351
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 89/147 (60%), Gaps = 8/147 (5%)
Query: 40 QKWHNGGGIFHQSACIDSTVLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGF 99
+ W GI +A I T IE GA V + AV+G+ V IG+GT++ IGQ+ IG
Sbjct: 111 ESWLGETGI-SPAAFIHPTAQIEDGATVEAGAVIGSGVTIGAGTLIAATAVIGQNCQIGR 169
Query: 100 N------VALSNCIIGDSCIIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIG 153
N V++ IG++ +H GV IGQDGFG+ G + K PQL I ++VEIG
Sbjct: 170 NSYIAPGVSVQCAFIGNNVSLHPGVRIGQDGFGYVPGAAG-LDKVPQLGRVIIQDNVEIG 228
Query: 154 ANSCIDRGSWRDTVIGDHSKIDNLVQV 180
AN+ +DRGS DTVIG+ +KIDNLVQ+
Sbjct: 229 ANTTVDRGSLDDTVIGEGTKIDNLVQI 255
>sp|P0A3P4|LPXD_BRUME UDP-3-O-acylglucosamine N-acyltransferase OS=Brucella melitensis
biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) GN=lpxD
PE=3 SV=1
Length = 351
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 89/147 (60%), Gaps = 8/147 (5%)
Query: 40 QKWHNGGGIFHQSACIDSTVLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGF 99
+ W GI +A I T IE GA V + AV+G+ V IG+GT++ IGQ+ IG
Sbjct: 111 ESWLGETGI-SPAAFIHPTAQIEDGATVEAGAVIGSGVTIGAGTLIAATAVIGQNCQIGR 169
Query: 100 N------VALSNCIIGDSCIIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIG 153
N V++ IG++ +H GV IGQDGFG+ G + K PQL I ++VEIG
Sbjct: 170 NSYIAPGVSVQCAFIGNNVSLHPGVRIGQDGFGYVPGAAG-LDKVPQLGRVIIQDNVEIG 228
Query: 154 ANSCIDRGSWRDTVIGDHSKIDNLVQV 180
AN+ +DRGS DTVIG+ +KIDNLVQ+
Sbjct: 229 ANTTVDRGSLDDTVIGEGTKIDNLVQI 255
>sp|C0RJC2|LPXD_BRUMB UDP-3-O-acylglucosamine N-acyltransferase OS=Brucella melitensis
biotype 2 (strain ATCC 23457) GN=lpxD PE=3 SV=1
Length = 351
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 89/147 (60%), Gaps = 8/147 (5%)
Query: 40 QKWHNGGGIFHQSACIDSTVLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGF 99
+ W GI +A I T IE GA V + AV+G+ V IG+GT++ IGQ+ IG
Sbjct: 111 ESWLGETGI-SPAAFIHPTAQIEDGATVEAGAVIGSGVTIGAGTLIAATAVIGQNCQIGR 169
Query: 100 N------VALSNCIIGDSCIIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIG 153
N V++ IG++ +H GV IGQDGFG+ G + K PQL I ++VEIG
Sbjct: 170 NSYIAPGVSVQCAFIGNNVSLHPGVRIGQDGFGYVPGAAG-LDKVPQLGRVIIQDNVEIG 228
Query: 154 ANSCIDRGSWRDTVIGDHSKIDNLVQV 180
AN+ +DRGS DTVIG+ +KIDNLVQ+
Sbjct: 229 ANTTVDRGSLDDTVIGEGTKIDNLVQI 255
>sp|A9M5G6|LPXD_BRUC2 UDP-3-O-acylglucosamine N-acyltransferase OS=Brucella canis (strain
ATCC 23365 / NCTC 10854) GN=lpxD PE=3 SV=1
Length = 351
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 89/147 (60%), Gaps = 8/147 (5%)
Query: 40 QKWHNGGGIFHQSACIDSTVLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGF 99
+ W GI +A I T IE GA V + AV+G+ V IG+GT++ IGQ+ IG
Sbjct: 111 ESWLGETGI-SPAAFIHPTAQIEDGATVEAGAVIGSGVTIGAGTLIAATAVIGQNCQIGR 169
Query: 100 N------VALSNCIIGDSCIIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIG 153
N V++ IG++ +H GV IGQDGFG+ G + K PQL I ++VEIG
Sbjct: 170 NSYIAPGVSVQCAFIGNNVSLHPGVRIGQDGFGYVPGAAG-LDKVPQLGRVIIQDNVEIG 228
Query: 154 ANSCIDRGSWRDTVIGDHSKIDNLVQV 180
AN+ +DRGS DTVIG+ +KIDNLVQ+
Sbjct: 229 ANTTVDRGSLDDTVIGEGTKIDNLVQI 255
>sp|P0C111|LPXD_BRUAB UDP-3-O-acylglucosamine N-acyltransferase OS=Brucella abortus
biovar 1 (strain 9-941) GN=lpxD PE=3 SV=1
Length = 351
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 89/147 (60%), Gaps = 8/147 (5%)
Query: 40 QKWHNGGGIFHQSACIDSTVLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGF 99
+ W GI +A I T IE GA V + AV+G+ V IG+GT++ IGQ+ IG
Sbjct: 111 ESWLGETGI-SPAAFIHPTAQIEDGATVEAGAVIGSGVTIGAGTLIAATAVIGQNCQIGR 169
Query: 100 N------VALSNCIIGDSCIIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIG 153
N V++ IG++ +H GV IGQDGFG+ G + K PQL I ++VEIG
Sbjct: 170 NSYIAPGVSVQCAFIGNNVSLHPGVRIGQDGFGYVPGAAG-LDKVPQLGRVIIQDNVEIG 228
Query: 154 ANSCIDRGSWRDTVIGDHSKIDNLVQV 180
AN+ +DRGS DTVIG+ +KIDNLVQ+
Sbjct: 229 ANTTVDRGSLDDTVIGEGTKIDNLVQI 255
>sp|Q2YRQ3|LPXD_BRUA2 UDP-3-O-acylglucosamine N-acyltransferase OS=Brucella abortus
(strain 2308) GN=lpxD PE=3 SV=1
Length = 351
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 89/147 (60%), Gaps = 8/147 (5%)
Query: 40 QKWHNGGGIFHQSACIDSTVLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGF 99
+ W GI +A I T IE GA V + AV+G+ V IG+GT++ IGQ+ IG
Sbjct: 111 ESWLGETGI-SPAAFIHPTAQIEDGATVEAGAVIGSGVTIGAGTLIAATAVIGQNCQIGR 169
Query: 100 N------VALSNCIIGDSCIIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIG 153
N V++ IG++ +H GV IGQDGFG+ G + K PQL I ++VEIG
Sbjct: 170 NSYIAPGVSVQCAFIGNNVSLHPGVRIGQDGFGYVPGAAG-LDKVPQLGRVIIQDNVEIG 228
Query: 154 ANSCIDRGSWRDTVIGDHSKIDNLVQV 180
AN+ +DRGS DTVIG+ +KIDNLVQ+
Sbjct: 229 ANTTVDRGSLDDTVIGEGTKIDNLVQI 255
>sp|B2S603|LPXD_BRUA1 UDP-3-O-acylglucosamine N-acyltransferase OS=Brucella abortus
(strain S19) GN=lpxD PE=3 SV=1
Length = 351
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 89/147 (60%), Gaps = 8/147 (5%)
Query: 40 QKWHNGGGIFHQSACIDSTVLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGF 99
+ W GI +A I T IE GA V + AV+G+ V IG+GT++ IGQ+ IG
Sbjct: 111 ESWLGETGI-SPAAFIHPTAQIEDGATVEAGAVIGSGVTIGAGTLIAATAVIGQNCQIGR 169
Query: 100 N------VALSNCIIGDSCIIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIG 153
N V++ IG++ +H GV IGQDGFG+ G + K PQL I ++VEIG
Sbjct: 170 NSYIAPGVSVQCAFIGNNVSLHPGVRIGQDGFGYVPGAAG-LDKVPQLGRVIIQDNVEIG 228
Query: 154 ANSCIDRGSWRDTVIGDHSKIDNLVQV 180
AN+ +DRGS DTVIG+ +KIDNLVQ+
Sbjct: 229 ANTTVDRGSLDDTVIGEGTKIDNLVQI 255
>sp|Q47F82|LPXD_DECAR UDP-3-O-acylglucosamine N-acyltransferase OS=Dechloromonas
aromatica (strain RCB) GN=lpxD PE=3 SV=1
Length = 347
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 84/148 (56%), Gaps = 6/148 (4%)
Query: 39 FQKWHNGGGIFHQSACIDS----TVLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQS 94
+ +G H SA ++S +V I + LG NV I +G V+G V+IG
Sbjct: 95 LNPYQSGLSGVHASAVVESPVPDSVAIAPNVYIGKDVTLGENVVINAGCVIGDGVSIGAG 154
Query: 95 TNIGFNVALS-NCIIGDSCIIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIG 153
T + NV + C IG CIIH+G IG DGFGF E + +K PQ+ IGN VEIG
Sbjct: 155 TVLYANVTVYYGCSIGQQCIIHSGAVIGSDGFGF-APEGQSWIKIPQIGRVVIGNDVEIG 213
Query: 154 ANSCIDRGSWRDTVIGDHSKIDNLVQVG 181
AN+ IDRG+ DTVIGD K+DNLV +G
Sbjct: 214 ANTTIDRGALEDTVIGDGCKLDNLVHIG 241
>sp|C5CKT0|LPXD_VARPS UDP-3-O-acylglucosamine N-acyltransferase OS=Variovorax paradoxus
(strain S110) GN=lpxD PE=3 SV=1
Length = 325
Score = 103 bits (257), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 77/122 (63%), Gaps = 2/122 (1%)
Query: 61 IEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGFNVALS-NCIIGDSCIIHNGVC 119
I A++H +AV+ A IG+ VV IG T + V +S +C++G+ C++H GV
Sbjct: 103 IHPSAVIHPEAVVDATARIGALCVVERGARIGAGTVLKSRVTISEDCVVGERCLLHPGVV 162
Query: 120 IGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIGANSCIDRGSWRDTVIGDHSKIDNLVQ 179
IG DGFG E G +K QL RIGN VEIGAN+CIDRG+ DTVI D K+DNL+Q
Sbjct: 163 IGADGFGLAPHE-GAWVKIEQLGAVRIGNDVEIGANTCIDRGALDDTVIEDGVKLDNLIQ 221
Query: 180 VG 181
+G
Sbjct: 222 IG 223
>sp|Q12A41|LPXD_POLSJ UDP-3-O-acylglucosamine N-acyltransferase OS=Polaromonas sp.
(strain JS666 / ATCC BAA-500) GN=lpxD PE=3 SV=1
Length = 351
Score = 103 bits (257), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 78/140 (55%), Gaps = 8/140 (5%)
Query: 49 FHQSACIDSTVLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGFNVALS---- 104
H SA ID + G V + A + A IG+G + IG+ ++G LS
Sbjct: 107 IHPSAFIDPAATLAPGVSVGAFACISAGTVIGAGARIAEHCVIGRDAHVGAESRLSARVT 166
Query: 105 ---NCIIGDSCIIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIGANSCIDRG 161
C IG+ CI+H G IG DGFGF G +K QL +IGN VEIGAN+CIDRG
Sbjct: 167 VADGCYIGERCIVHPGAVIGADGFGF-APHQGQWIKIEQLGAVKIGNDVEIGANTCIDRG 225
Query: 162 SWRDTVIGDHSKIDNLVQVG 181
+ +DTV+ D K+DNLVQ+G
Sbjct: 226 ALQDTVLEDGVKLDNLVQIG 245
>sp|A9BMM2|LPXD_DELAS UDP-3-O-acylglucosamine N-acyltransferase OS=Delftia acidovorans
(strain DSM 14801 / SPH-1) GN=lpxD PE=3 SV=1
Length = 335
Score = 103 bits (256), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 77/122 (63%), Gaps = 2/122 (1%)
Query: 61 IEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGFNVAL-SNCIIGDSCIIHNGVC 119
I A+VH A++ A+ IG VV TIG T + V + NC +G C++H+GV
Sbjct: 104 IHPSAVVHESAIVDASATIGPLCVVEEGATIGAHTVLKSRVTIGENCHVGARCLLHSGVV 163
Query: 120 IGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIGANSCIDRGSWRDTVIGDHSKIDNLVQ 179
+G DGFGF E+G +K QL RIG+ VEIGAN+CIDRG+ DTVI D K+DNL+Q
Sbjct: 164 LGADGFGF-APENGAWVKIEQLGGVRIGDDVEIGANTCIDRGALDDTVIEDGVKLDNLIQ 222
Query: 180 VG 181
+G
Sbjct: 223 IG 224
>sp|B9JEX8|LPXD_AGRRK UDP-3-O-acylglucosamine N-acyltransferase OS=Agrobacterium
radiobacter (strain K84 / ATCC BAA-868) GN=lpxD PE=3
SV=1
Length = 355
Score = 103 bits (256), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 83/131 (63%), Gaps = 1/131 (0%)
Query: 51 QSACIDSTVLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGFNVALSNCIIGD 110
+A +++ V +E GA+V A +G IG+G ++GP V IG+ IG ++ +G+
Sbjct: 128 PTAKLEADVGVEPGAVVGPGAEIGEGTRIGAGAIIGPGVKIGRHCTIGGGASVLCSYLGN 187
Query: 111 SCIIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIGANSCIDRGSWRDTVIGD 170
IIHNG IGQDGFG+ G M+K Q+ I ++VEIGAN+ IDRG+ DTVIG+
Sbjct: 188 GVIIHNGARIGQDGFGYAPSPRG-MIKIVQIGRVIIQDNVEIGANTTIDRGTMDDTVIGE 246
Query: 171 HSKIDNLVQVG 181
+KIDN VQ+G
Sbjct: 247 GTKIDNQVQIG 257
>sp|Q0BTL2|LPXD_GRABC UDP-3-O-acylglucosamine N-acyltransferase OS=Granulibacter
bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=lpxD
PE=3 SV=1
Length = 341
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 88/161 (54%), Gaps = 7/161 (4%)
Query: 20 FGRFCNLFSTKSDIESRQQFQKWHNGGGIFHQSACIDSTVLIEVGAIVHSKAVLGANVCI 79
+ R LF + Q + + ++ACID + I A++ + +G + I
Sbjct: 100 WARVAALFYPLPPV------QPGIHPSAVVDETACIDPSAQIGPLAVIEAGVEIGPDCRI 153
Query: 80 GSGTVVGPAVTIGQSTNIGFNVALSNCIIGDSCIIHNGVCIGQDGFGFFVDEHGNMLKKP 139
+ V+G V +G+S IG + +LS+ I+GD ++ GV IGQDGFGF G + P
Sbjct: 154 AAHAVIGAGVKMGRSCRIGSHASLSHAILGDRVYVYPGVRIGQDGFGFAPSSEG-FVTVP 212
Query: 140 QLLNARIGNHVEIGANSCIDRGSWRDTVIGDHSKIDNLVQV 180
QL + N VE+GANS IDRGS DTVIG S++DNLV +
Sbjct: 213 QLGRVVLENDVEVGANSTIDRGSMHDTVIGAGSRLDNLVMI 253
>sp|Q5WSK5|LPXD2_LEGPL UDP-3-O-acylglucosamine N-acyltransferase 2 OS=Legionella
pneumophila (strain Lens) GN=lpxD2 PE=3 SV=1
Length = 343
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 83/151 (54%), Gaps = 7/151 (4%)
Query: 37 QQFQKWHNGGGIFHQSACIDSTVLIEVGAIVHSKAVLGANVCIGSG------TVVGPAVT 90
Q F G SA I+++ +I + +G N IGSG T +G VT
Sbjct: 101 QAFYPSEKPAGFIASSAAIETSAVIGSNCYIAHGVYIGNNAKIGSGCQIGVNTYIGDGVT 160
Query: 91 IGQSTNIGFNVALSNCIIGDSCIIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARIGNHV 150
IG I NV++ + +IG +I+ G IGQDGFGF D G+ K P IGNHV
Sbjct: 161 IGDDCLIEDNVSIRHAVIGKHVVIYPGARIGQDGFGFASDASGHY-KIPHAGGVIIGNHV 219
Query: 151 EIGANSCIDRGSWRDTVIGDHSKIDNLVQVG 181
EIGAN+CIDRGS +TVI D ++DNLVQVG
Sbjct: 220 EIGANTCIDRGSLDNTVIEDWCRLDNLVQVG 250
>sp|A9ISM1|LPXD_BART1 UDP-3-O-acylglucosamine N-acyltransferase OS=Bartonella tribocorum
(strain CIP 105476 / IBS 506) GN=lpxD PE=3 SV=1
Length = 348
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 95/171 (55%), Gaps = 3/171 (1%)
Query: 12 LTKTYKQDFGRFCNLFSTKSDIESRQQF-QKWHNGGGIFHQSACIDSTVLIEVGAIVHSK 70
+T T ++DF + + S ++ F QK + H +A V IE GA++
Sbjct: 88 VTSTPQRDFAQIGRILFPDS-VKPMPWFGQKEISPHAHIHPTAKFAHDVCIEAGAVIGRN 146
Query: 71 AVLGANVCIGSGTVVGPAVTIGQSTNIGFNVALSNCIIGDSCIIHNGVCIGQDGFGFFVD 130
+GA I S V+G IG+ I V + +IGD+ ++ GVCIGQDGFG +V
Sbjct: 147 VEIGAGTLISSTAVIGENCRIGRDCYIAPKVTVQCSLIGDTVQLYPGVCIGQDGFG-YVG 205
Query: 131 EHGNMLKKPQLLNARIGNHVEIGANSCIDRGSWRDTVIGDHSKIDNLVQVG 181
+ K PQL I + VEIGAN+ IDRG+++DTVIG+ SKIDNLVQ+
Sbjct: 206 GISGIEKIPQLGRVIIEDGVEIGANTTIDRGTFQDTVIGEGSKIDNLVQIA 256
>sp|Q5ZRD8|LPXD2_LEGPH UDP-3-O-acylglucosamine N-acyltransferase 2 OS=Legionella
pneumophila subsp. pneumophila (strain Philadelphia 1 /
ATCC 33152 / DSM 7513) GN=lpxD2 PE=3 SV=2
Length = 343
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 88/151 (58%), Gaps = 7/151 (4%)
Query: 37 QQFQKWHNGGGIFHQSACIDSTVLIEV------GAIVHSKAVLGANVCIGSGTVVGPAVT 90
Q F G SA I+S+ +I V GA + ++ +G IG T +G VT
Sbjct: 101 QAFYPSEKPPGFIATSAMIESSAIIGVDCFIAHGAYIGNQVKIGNRCKIGVNTYIGDTVT 160
Query: 91 IGQSTNIGFNVALSNCIIGDSCIIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARIGNHV 150
IG I NV++ + +IG++ +I++G IGQDGFGF D +G+ K P IGN V
Sbjct: 161 IGDDCLIEDNVSIRHAVIGNNVVIYSGARIGQDGFGFASDANGHY-KIPHAGGVIIGNDV 219
Query: 151 EIGANSCIDRGSWRDTVIGDHSKIDNLVQVG 181
EIGAN+CIDRGS +TVI D ++DNLVQ+G
Sbjct: 220 EIGANTCIDRGSLDNTVIEDWCRLDNLVQIG 250
>sp|A1K6R1|LPXD_AZOSB UDP-3-O-acylglucosamine N-acyltransferase OS=Azoarcus sp. (strain
BH72) GN=lpxD PE=3 SV=1
Length = 341
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
Query: 73 LGANVCIGSGTVVGPAVTIGQSTNIGFNVAL-SNCIIGDSCIIHNGVCIGQDGFGFFVDE 131
LG +V IG+G+ +G V IG T + V + C+IG +C+IH G IG DGFGF ++
Sbjct: 127 LGEDVVIGAGSSIGAGVRIGAGTRLAPRVVIYPGCVIGTNCLIHAGAVIGSDGFGFAREK 186
Query: 132 HGNMLKKPQLLNARIGNHVEIGANSCIDRGSWRDTVIGDHSKIDNLVQVG 181
G +K PQ+ IG+ VEIGAN+ IDRG+ DTVIG+ KIDN +Q+G
Sbjct: 187 SGAWVKIPQVGRVVIGDDVEIGANTTIDRGALDDTVIGNGVKIDNQIQIG 236
>sp|B3Q7J5|LPXD_RHOPT UDP-3-O-acylglucosamine N-acyltransferase OS=Rhodopseudomonas
palustris (strain TIE-1) GN=lpxD PE=3 SV=1
Length = 360
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 83/135 (61%), Gaps = 4/135 (2%)
Query: 48 IFHQSACIDSTVLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGFNVALSNCI 107
+ H++A ++ V +E A++ +G+ IG+G V+ V IG+ +IG L + +
Sbjct: 124 VIHETAKLEDEVTVEPLAVIGPDVEIGSGTVIGAGAVIAAGVKIGRDCDIGAGSHLQHAL 183
Query: 108 IGDSCIIHNGVCIGQDGFGF-FVDEHGNMLKKPQLLNARIGNHVEIGANSCIDRGSWRDT 166
IG++ ++H G IGQDGFGF F +H K PQ I + VE+GA + IDRGS RDT
Sbjct: 184 IGNNVLMHPGCHIGQDGFGFIFAGQH---TKVPQTGRVIIQHDVELGAGTTIDRGSLRDT 240
Query: 167 VIGDHSKIDNLVQVG 181
VIG+ +KIDN VQ+G
Sbjct: 241 VIGEGTKIDNQVQIG 255
>sp|Q6N5Q9|LPXD_RHOPA UDP-3-O-acylglucosamine N-acyltransferase OS=Rhodopseudomonas
palustris (strain ATCC BAA-98 / CGA009) GN=lpxD PE=3
SV=1
Length = 360
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 83/135 (61%), Gaps = 4/135 (2%)
Query: 48 IFHQSACIDSTVLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGFNVALSNCI 107
+ H++A ++ V +E A++ +G+ IG+G V+ V IG+ +IG L + +
Sbjct: 124 VIHETAKLEDEVTVEPLAVIGPDVEIGSGTVIGAGAVIAAGVKIGRDCDIGAGSHLQHAL 183
Query: 108 IGDSCIIHNGVCIGQDGFGF-FVDEHGNMLKKPQLLNARIGNHVEIGANSCIDRGSWRDT 166
IG++ ++H G IGQDGFGF F +H K PQ I + VE+GA + IDRGS RDT
Sbjct: 184 IGNNVLMHPGCHIGQDGFGFIFAGQH---TKVPQTGRVIIQHDVELGAGTTIDRGSLRDT 240
Query: 167 VIGDHSKIDNLVQVG 181
VIG+ +KIDN VQ+G
Sbjct: 241 VIGEGTKIDNQVQIG 255
>sp|Q136B3|LPXD_RHOPS UDP-3-O-acylglucosamine N-acyltransferase OS=Rhodopseudomonas
palustris (strain BisB5) GN=lpxD PE=3 SV=1
Length = 359
Score = 100 bits (249), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/137 (45%), Positives = 82/137 (59%), Gaps = 10/137 (7%)
Query: 52 SACIDSTVLIEVGAIVHSKAVLGANVCIGSGTVVGPA------VTIGQSTNIGFNVALSN 105
SA I +T +E G IV AV+G V IG+G+V+G V IG+ N+G N +
Sbjct: 122 SAVIHATARLEDGVIVDPLAVIGPEVEIGAGSVIGAGSVIASGVKIGRDCNVGANTTIQF 181
Query: 106 CIIGDSCIIHNGVCIGQDGFGF-FVDEHGNMLKKPQLLNARIGNHVEIGANSCIDRGSWR 164
+IG++ +IH G IGQDGF F F H K PQ+ I N VEIG+ + +DRG R
Sbjct: 182 ALIGNNVLIHPGCHIGQDGFRFIFAQTH---QKVPQVGRVIIQNDVEIGSGTTVDRGGLR 238
Query: 165 DTVIGDHSKIDNLVQVG 181
DTVIG+ +KIDN VQVG
Sbjct: 239 DTVIGEGTKIDNQVQVG 255
>sp|Q1MPK2|LPXD_LAWIP UDP-3-O-acylglucosamine N-acyltransferase OS=Lawsonia
intracellularis (strain PHE/MN1-00) GN=lpxD PE=3 SV=1
Length = 341
Score = 100 bits (248), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 94/176 (53%), Gaps = 22/176 (12%)
Query: 13 TKTYKQDFGRFCNLFSTKSDIESRQQFQKWHNGGGIFHQSACIDSTVLIEVGAIVHSKAV 72
T+ Y+ DFGR +LFS GI HQ A I T + A ++
Sbjct: 75 TEPYR-DFGRVLSLFSIPQGCFD-----------GISHQ-AYIHPTAQVSKTATIYPFVF 121
Query: 73 LGANVCIGSGTVVGPAVTIGQSTNIGFN-------VALSNCIIGDSCIIHNGVCIGQDGF 125
+G++ I T + P V IG+ +IG N V ++N IG+ CIIH GV +G DGF
Sbjct: 122 IGSHTVIEENTTLFPGVYIGEHCHIGKNCTIYPNTVLMANTSIGNDCIIHAGVVLGSDGF 181
Query: 126 GFFVDEHGNMLKKPQLLNARIGNHVEIGANSCIDRGSWRDTVIGDHSKIDNLVQVG 181
GF + E K PQ+ N I + VEIGAN+ +DRG+ T I +++KIDNLVQ+G
Sbjct: 182 GFALTEEKQ--KIPQVGNVIIKDKVEIGANTTVDRGTLGTTTINENTKIDNLVQIG 235
>sp|Q6G1J4|LPXD_BARQU UDP-3-O-acylglucosamine N-acyltransferase OS=Bartonella quintana
(strain Toulouse) GN=lpxD PE=3 SV=1
Length = 348
Score = 100 bits (248), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 92/170 (54%), Gaps = 3/170 (1%)
Query: 12 LTKTYKQDFGRFCNLFSTKSDIESRQQF-QKWHNGGGIFHQSACIDSTVLIEVGAIVHSK 70
+T T ++DF + + S ++ F Q+ + H SA V IE GA++
Sbjct: 88 VTSTPQRDFAQIGRILFPDS-VKPMPWFGQREISPYAHIHPSAKFGHDVCIEAGAVIGKN 146
Query: 71 AVLGANVCIGSGTVVGPAVTIGQSTNIGFNVALSNCIIGDSCIIHNGVCIGQDGFGFFVD 130
+G+ I S V+G IG+ I V + +IGD ++ G CIGQDGFG+
Sbjct: 147 VEIGSGSLISSTAVIGENCRIGRDCYIAPKVTVQYSLIGDRVYLYPGTCIGQDGFGYVGG 206
Query: 131 EHGNMLKKPQLLNARIGNHVEIGANSCIDRGSWRDTVIGDHSKIDNLVQV 180
G + K PQL I + VEIGAN+ IDRG++ DT+IG+ SKIDNLVQ+
Sbjct: 207 ASG-IEKVPQLGRVIIKDGVEIGANTTIDRGTFEDTIIGEGSKIDNLVQI 255
>sp|Q0C1B1|LPXD_HYPNA UDP-3-O-acylglucosamine N-acyltransferase OS=Hyphomonas neptunium
(strain ATCC 15444) GN=lpxD PE=3 SV=1
Length = 338
Score = 100 bits (248), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 76/128 (59%), Gaps = 1/128 (0%)
Query: 53 ACIDSTVLIEVGAIVHSKAVLGANVCIGSGTVVGPAVTIGQSTNIGFNVALSNCIIGDSC 112
A I + +++ GA++ A +G IG+ V+GP V IG++T+IG N ++ ++GD
Sbjct: 120 AQIHANAIVQPGAVIGPGAAVGEGAVIGANAVIGPGVQIGRNTSIGANASIHCALVGDQV 179
Query: 113 IIHNGVCIGQDGFGFFVDEHGNMLKKPQLLNARIGNHVEIGANSCIDRGSWRDTVIGDHS 172
I G IG+ GFG V G P I +HV IGANSCIDRG + DT+IG+ +
Sbjct: 180 TILAGARIGETGFGVLVGPQGAE-DSPHFGRVIIQDHVTIGANSCIDRGVFEDTIIGERT 238
Query: 173 KIDNLVQV 180
KIDNL Q+
Sbjct: 239 KIDNLCQI 246
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.140 0.444
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,922,855
Number of Sequences: 539616
Number of extensions: 2827453
Number of successful extensions: 13235
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 386
Number of HSP's that attempted gapping in prelim test: 8639
Number of HSP's gapped (non-prelim): 3124
length of query: 183
length of database: 191,569,459
effective HSP length: 110
effective length of query: 73
effective length of database: 132,211,699
effective search space: 9651454027
effective search space used: 9651454027
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 57 (26.6 bits)