BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030081
(183 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8L799|MIOX1_ARATH Inositol oxygenase 1 OS=Arabidopsis thaliana GN=MIOX1 PE=2 SV=1
Length = 311
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 128/175 (73%), Positives = 137/175 (78%), Gaps = 10/175 (5%)
Query: 1 MTILID----QPHFGVEVQEKKV---PIDEKELSLDGGFLVPQTNSFGHTFRDYDAEGER 53
MTILID Q G E+ EK +E EL LD GF P TNSFG TFRDYDAE ER
Sbjct: 1 MTILIDRHSDQNDAGDEIVEKNQGNGKEEETELVLDAGFEAPHTNSFGRTFRDYDAESER 60
Query: 54 QEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQI 113
+ GVE FYR+NHI QT DFV+KMREEY KLNR EMSIWECCELLN+ +DESDPDLDEPQI
Sbjct: 61 RRGVEEFYRVNHIGQTVDFVRKMREEYEKLNRTEMSIWECCELLNEFIDESDPDLDEPQI 120
Query: 114 EHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGELHFSFP 168
EHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVL SFG LPQWAVVG+ +FP
Sbjct: 121 EHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLLHSSFGELPQWAVVGD---TFP 172
>sp|O82200|MIOX2_ARATH Inositol oxygenase 2 OS=Arabidopsis thaliana GN=MIOX2 PE=2 SV=2
Length = 317
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 126/182 (69%), Positives = 146/182 (80%), Gaps = 18/182 (9%)
Query: 1 MTILIDQPHFGVEVQEKKVPIDEK--ELSLDGGFLVPQT-----------NSFGHTFRDY 47
MTIL++ V EKKV I+E+ EL LDGGF+VP++ N GH+FRDY
Sbjct: 1 MTILVEHFVPDSRVDEKKV-IEERDNELVLDGGFVVPKSKETDAFDAPDMNFLGHSFRDY 59
Query: 48 -DAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDP 106
+ E ERQ+GVE FYR+ HI+QTYDFVKKMR+EYGKLN++EMSIWECCELLN+VVDESDP
Sbjct: 60 ENGESERQQGVEEFYRMQHIHQTYDFVKKMRKEYGKLNKMEMSIWECCELLNNVVDESDP 119
Query: 107 DLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGELHFS 166
DLDEPQI+HLLQTAEAIR+DYPDEDWLHLT LIHDLGKVL LP FGGLPQWAVVG+ +
Sbjct: 120 DLDEPQIQHLLQTAEAIRRDYPDEDWLHLTALIHDLGKVLLLPEFGGLPQWAVVGD---T 176
Query: 167 FP 168
FP
Sbjct: 177 FP 178
>sp|Q5Z8T3|MIOX_ORYSJ Probable inositol oxygenase OS=Oryza sativa subsp. japonica
GN=Os06g0561000 PE=2 SV=1
Length = 308
Score = 239 bits (609), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 115/173 (66%), Positives = 141/173 (81%), Gaps = 9/173 (5%)
Query: 1 MTILIDQPHFGVEVQEKKVPI-----DEKELSLDGGFLVPQTNSFGHTFRDYDAEGERQE 55
MTI I+QPH + ++KV + EL LDGGF+VP +N+FG+ FR+Y+AE ER+E
Sbjct: 1 MTITIEQPHLDA-IADRKVAGGGGGDNAAELVLDGGFVVPDSNAFGNAFRNYEAESERKE 59
Query: 56 GVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEH 115
VE FYR+NHINQTYDFV++MREEYG++++ EM IWEC ELLN+ +D+SDPDLD PQIEH
Sbjct: 60 TVEEFYRVNHINQTYDFVRRMREEYGRVDKTEMGIWECIELLNEFIDDSDPDLDMPQIEH 119
Query: 116 LLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGELHFSFP 168
LLQTAEAIRKD+PDEDWLHLTGLIHDLGKVL PSFG LPQW+VVG+ +FP
Sbjct: 120 LLQTAEAIRKDFPDEDWLHLTGLIHDLGKVLLHPSFGELPQWSVVGD---TFP 169
>sp|Q8H1S0|MIOX4_ARATH Inositol oxygenase 4 OS=Arabidopsis thaliana GN=MIOX4 PE=2 SV=1
Length = 317
Score = 236 bits (601), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 118/181 (65%), Positives = 137/181 (75%), Gaps = 16/181 (8%)
Query: 1 MTILIDQPHFGVEVQEKKVPIDEKELSLDGGF-------------LVPQTNSFGHTFRDY 47
MTI +++P F +K + EL LDGGF L P+ N+FG FRDY
Sbjct: 1 MTISVEKPIFEEVSAFEKSGDNIGELKLDGGFSMPKMDTNDDEAFLAPEMNAFGRQFRDY 60
Query: 48 DAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPD 107
D E ERQ+GVE FYR+ HINQT DFVKKMR EYGKL+++ MSIWECCELLN+VVDESDPD
Sbjct: 61 DVESERQKGVEEFYRLQHINQTVDFVKKMRAEYGKLDKMVMSIWECCELLNEVVDESDPD 120
Query: 108 LDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGELHFSF 167
LDEPQI+HLLQ+AEAIRKDYP+EDWLHLT LIHDLGKV+ LP FGGLPQWAVVG+ +F
Sbjct: 121 LDEPQIQHLLQSAEAIRKDYPNEDWLHLTALIHDLGKVITLPQFGGLPQWAVVGD---TF 177
Query: 168 P 168
P
Sbjct: 178 P 178
>sp|Q9FJU4|MIOX5_ARATH Inositol oxygenase 5 OS=Arabidopsis thaliana GN=MIOX5 PE=2 SV=1
Length = 314
Score = 212 bits (539), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/181 (60%), Positives = 126/181 (69%), Gaps = 19/181 (10%)
Query: 1 MTILIDQPHFGVEVQEKKVPIDEKELSLDGG------------FLVPQTNSFGHTFRDY- 47
M I ++ P F V E EL LD FL P+ N+FG FRDY
Sbjct: 1 MNISVENPVF---VHEDSTTQKTGELRLDSDIPMSKISSDDEVFLAPEMNAFGRQFRDYT 57
Query: 48 DAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPD 107
D ERQ+ VE+FY H NQT DFV+KMR EYGKL+++ M+IWECCEL +VVDESDPD
Sbjct: 58 DTNSERQKSVEHFYATQHTNQTLDFVQKMRSEYGKLDKMVMNIWECCELSKEVVDESDPD 117
Query: 108 LDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGELHFSF 167
LDEPQI+HLLQ+AEAIRKDYP+EDWLHLT LIHDLGKVL LP FGGLPQWAVVG+ +F
Sbjct: 118 LDEPQIQHLLQSAEAIRKDYPNEDWLHLTALIHDLGKVLTLPQFGGLPQWAVVGD---TF 174
Query: 168 P 168
P
Sbjct: 175 P 175
>sp|Q54GH4|MIOX_DICDI Inositol oxygenase OS=Dictyostelium discoideum GN=miox PE=3 SV=1
Length = 292
Score = 127 bits (320), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 91/145 (62%), Gaps = 12/145 (8%)
Query: 27 SLDGGFLVPQTNSFGHTFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLN-R 85
SL GF + + FR+Y+ +R V YR +H QTYD+ + +++Y +L+
Sbjct: 18 SLKTGFEITKE---VEEFRNYENSEDR---VSEAYRNSHTYQTYDYATEKKKQYSQLDTS 71
Query: 86 VEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDE--DWLHLTGLIHDLG 143
++M +WE ELLN ++DESDPD + PQI H LQTAEAIRK YPD DW HLTG IHDLG
Sbjct: 72 IKMGLWEAAELLNTIIDESDPDSNIPQINHCLQTAEAIRKVYPDSKYDWFHLTGFIHDLG 131
Query: 144 KVLNLPSFGGLPQWAVVGELHFSFP 168
KVL F PQWA VG+ +FP
Sbjct: 132 KVLLSKKFKEQPQWATVGD---TFP 153
>sp|Q9QXN5|MIOX_MOUSE Inositol oxygenase OS=Mus musculus GN=Miox PE=1 SV=2
Length = 285
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/134 (46%), Positives = 85/134 (63%), Gaps = 7/134 (5%)
Query: 35 PQTNSFGHTFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECC 94
P+ +FR+Y G + V Y++ H +QT DFV + R +YG + +M+I E
Sbjct: 19 PEMAKSKDSFRNY-TSGPLLDRVFTTYKLMHTHQTVDFVSRKRIQYGSFSYKKMTIMEAV 77
Query: 95 ELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGL 154
+L+D+VDESDPD+D P H QTAE IRK +PD+DW HL GL+HDLGK++ L G
Sbjct: 78 GMLDDLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKIMAL---WGE 134
Query: 155 PQWAVVGELHFSFP 168
PQWAVVG+ +FP
Sbjct: 135 PQWAVVGD---TFP 145
>sp|Q9QXN4|MIOX_RAT Inositol oxygenase OS=Rattus norvegicus GN=Miox PE=2 SV=2
Length = 285
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 86/134 (64%), Gaps = 7/134 (5%)
Query: 35 PQTNSFGHTFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECC 94
P+ +FR+Y G + V Y++ H +QT DFV + R ++G + +M++ E
Sbjct: 19 PEMAKSKGSFRNY-TSGPLLDRVFTTYKLMHTHQTVDFVMRKRIQFGSFSYKKMTVMEAV 77
Query: 95 ELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGL 154
++L+D+VDESDPD+D P H QTAE IRK +PD+DW HL GL+HDLGK+L L G
Sbjct: 78 DMLDDLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKILAL---WGE 134
Query: 155 PQWAVVGELHFSFP 168
PQWAVVG+ +FP
Sbjct: 135 PQWAVVGD---TFP 145
>sp|Q5REY9|MIOX_PONAB Inositol oxygenase OS=Pongo abelii GN=MIOX PE=2 SV=1
Length = 285
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 82/126 (65%), Gaps = 7/126 (5%)
Query: 43 TFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVD 102
+FR+Y G + V Y++ H +QT DFV+ ++G + +M++ E +LL+ +VD
Sbjct: 27 SFRNY-TSGPLLDRVFTTYKLMHTHQTVDFVRSKHAQFGGFSYKKMTVMEAVDLLDGLVD 85
Query: 103 ESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGE 162
ESDPD+D P H QTAE IRK +PD+DW HL GL+HDLGKVL L G PQWAVVG+
Sbjct: 86 ESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKVLAL---FGEPQWAVVGD 142
Query: 163 LHFSFP 168
+FP
Sbjct: 143 ---TFP 145
>sp|Q9UGB7|MIOX_HUMAN Inositol oxygenase OS=Homo sapiens GN=MIOX PE=1 SV=1
Length = 285
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 84/134 (62%), Gaps = 7/134 (5%)
Query: 35 PQTNSFGHTFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECC 94
P+ +FR+Y G + V Y++ H +QT DFV+ ++G + +M++ E
Sbjct: 19 PEVAKDKASFRNY-TSGPLLDRVFTTYKLMHTHQTVDFVRSKHAQFGGFSYKKMTVMEAV 77
Query: 95 ELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGL 154
+LL+ +VDESDPD+D P H QTAE IRK +PD+DW HL GL+HDLGKVL L G
Sbjct: 78 DLLDGLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKVLAL---FGE 134
Query: 155 PQWAVVGELHFSFP 168
PQWAVVG+ +FP
Sbjct: 135 PQWAVVGD---TFP 145
>sp|A7MBE4|MIOX_BOVIN Inositol oxygenase OS=Bos taurus GN=MIOX PE=2 SV=1
Length = 285
Score = 114 bits (285), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/134 (44%), Positives = 83/134 (61%), Gaps = 7/134 (5%)
Query: 35 PQTNSFGHTFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECC 94
P+ +FR+Y G + V Y++ H QT DFV++ ++G + M++ E
Sbjct: 19 PEAAKDKDSFRNY-TSGPLLDRVFATYKLMHTWQTVDFVRRKHAQFGGFSYKRMTVMEAV 77
Query: 95 ELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGL 154
++L+ +VDESDPD+D P H QTAE IRK +PD+DW HL GL+HDLGKVL L G
Sbjct: 78 DMLDGLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKVLAL---AGE 134
Query: 155 PQWAVVGELHFSFP 168
PQWAVVG+ +FP
Sbjct: 135 PQWAVVGD---TFP 145
>sp|Q8WN98|MIOX_PIG Inositol oxygenase OS=Sus scrofa GN=MIOX PE=1 SV=1
Length = 282
Score = 114 bits (284), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 81/126 (64%), Gaps = 7/126 (5%)
Query: 43 TFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVD 102
+FR+Y G + V Y++ H QT DFV+K ++G + M++ E ++L+ +VD
Sbjct: 24 SFRNY-TSGPLLDRVFRTYKLMHTWQTVDFVRKKHAQFGGFSYKRMTVLEAVDMLDGLVD 82
Query: 103 ESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGE 162
ESDPD+D P H QTAE IRK +PD+DW HL GL+HDLGKVL L G PQWAVVG+
Sbjct: 83 ESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKVLVL---AGEPQWAVVGD 139
Query: 163 LHFSFP 168
+FP
Sbjct: 140 ---TFP 142
>sp|Q4V8T0|MIOX_DANRE Inositol oxygenase OS=Danio rerio GN=miox PE=2 SV=1
Length = 278
Score = 104 bits (259), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 81/121 (66%), Gaps = 4/121 (3%)
Query: 44 FRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDE 103
FR+++ G+ + V N Y++ H +QT DFVK+ + + + +S+ + + L+++VDE
Sbjct: 21 FRNFE-NGDLFDRVFNTYKLMHTHQTLDFVKQKHQVWSNCSHFSLSMMDSIDSLDELVDE 79
Query: 104 SDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGEL 163
SDPD+D P H QTAE IR+++PD+DW L GLIHD+GKV+ L S PQWAVVG+
Sbjct: 80 SDPDVDFPNSFHAFQTAEGIRREHPDKDWFQLVGLIHDVGKVMALYS---EPQWAVVGDT 136
Query: 164 H 164
+
Sbjct: 137 Y 137
>sp|A5VQ53|DGTL1_BRUO2 Deoxyguanosinetriphosphate triphosphohydrolase-like protein
OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC
10512) GN=BOV_0867 PE=3 SV=1
Length = 402
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 34 VPQTNSFGHTFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWEC 93
V + FGHT + E E +ENF +H Q+ V K+ Y + + +S WE
Sbjct: 101 VALVHDFGHTPFGHTGEDALNERMENFGGFDHNAQSLRIVTKLEHRYADFDGLNLS-WET 159
Query: 94 CELL 97
E L
Sbjct: 160 LEGL 163
>sp|Q9YEV6|CDC6_AERPE Cell division control protein 6 homolog OS=Aeropyrum pernix (strain
ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
GN=cdc6 PE=1 SV=3
Length = 395
Score = 31.6 bits (70), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 100 VVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQW-A 158
V+DE D P + LL I ++ D W+ L G+ + LG V NL P+ +
Sbjct: 143 VLDEIDFLPKRPGGQDLLYRITRINQELGDRVWVSLVGITNSLGFVENLE-----PRVKS 197
Query: 159 VVGELHFSFPPPPNPNF 175
+GE+ FPP P
Sbjct: 198 SLGEVELVFPPYTAPQL 214
>sp|Q8VCU1|EST3B_MOUSE Carboxylesterase 3B OS=Mus musculus GN=Ces3b PE=2 SV=1
Length = 568
Score = 31.2 bits (69), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 15/85 (17%)
Query: 90 IWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLP 149
+W C LL V + P + +P+++ L + D D +++N+
Sbjct: 13 VWVTCLLLAFVTTVTGPKVIQPEVDTPLGRVRGRQVGVKDTD------------RMVNV- 59
Query: 150 SFGGLP-QWAVVGELHFSFPPPPNP 173
F G+P A VG L FS P PP P
Sbjct: 60 -FLGIPFAQAPVGPLRFSAPLPPQP 83
>sp|A8WW61|CEP1_CAEBR Transcription factor cep-1 OS=Caenorhabditis briggsae GN=cep-1 PE=1
SV=2
Length = 658
Score = 30.8 bits (68), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 34 VPQTNSFGHTFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWEC 93
VP ++ + R + E R E +FYR N+ K+ R +YG +V++S E
Sbjct: 492 VPSSDQQSYPMRLHGCESRRMEM--SFYRKFKENEDSLSNKRPRSQYGLQRQVKLSEKEY 549
Query: 94 CELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPD--EDWLHLTG 137
+ + E + ++ + H L A+A R D D E +L G
Sbjct: 550 SKFVAFFAKEGENEISKYASAHCLTPAQASRLDPSDKIEKFLAFVG 595
>sp|P63934|DGTL1_BRUSU Deoxyguanosinetriphosphate triphosphohydrolase-like protein
OS=Brucella suis biovar 1 (strain 1330) GN=dgt PE=3 SV=1
Length = 402
Score = 30.8 bits (68), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 34 VPQTNSFGHTFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWEC 93
V + FGHT + E E ++NF +H Q+ V K+ Y + + +S WE
Sbjct: 101 VALVHDFGHTPFGHTGEDALNERMKNFGGFDHNAQSLRIVTKLEHRYADFDGLNLS-WET 159
Query: 94 CELL 97
E L
Sbjct: 160 LEGL 163
>sp|P63933|DGTL1_BRUME Deoxyguanosinetriphosphate triphosphohydrolase-like protein
OS=Brucella melitensis biotype 1 (strain 16M / ATCC
23456 / NCTC 10094) GN=BMEI1090 PE=3 SV=1
Length = 402
Score = 30.8 bits (68), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 34 VPQTNSFGHTFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWEC 93
V + FGHT + E E ++NF +H Q+ V K+ Y + + +S WE
Sbjct: 101 VALVHDFGHTPFGHTGEDALNERMKNFGGFDHNAQSLRIVTKLEHRYADFDGLNLS-WET 159
Query: 94 CELL 97
E L
Sbjct: 160 LEGL 163
>sp|A9MAP9|DGTL1_BRUC2 Deoxyguanosinetriphosphate triphosphohydrolase-like protein
OS=Brucella canis (strain ATCC 23365 / NCTC 10854)
GN=BCAN_A0890 PE=3 SV=1
Length = 402
Score = 30.8 bits (68), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 34 VPQTNSFGHTFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWEC 93
V + FGHT + E E ++NF +H Q+ V K+ Y + + +S WE
Sbjct: 101 VALVHDFGHTPFGHTGEDALNERMKNFGGFDHNAQSLRIVTKLEHRYADFDGLNLS-WET 159
Query: 94 CELL 97
E L
Sbjct: 160 LEGL 163
>sp|Q822F4|AAXA_CHLCV Porin AaxA OS=Chlamydophila caviae (strain GPIC) GN=aaxA PE=3 SV=1
Length = 451
Score = 30.8 bits (68), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Query: 85 RVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGK 144
R++ S E ES DL + H+L + KD P ++ L ++ L+H + K
Sbjct: 43 RLKRSNAEDSAFYLSSASESSEDLRQEPRRHILTPVRNVLKDDPCDEGLSISKLLHSIEK 102
Query: 145 VLNLP---SFGGLPQW 157
N F LPQW
Sbjct: 103 ETNSQISVDFTILPQW 118
>sp|B0CLK1|DGTL1_BRUSI Deoxyguanosinetriphosphate triphosphohydrolase-like protein
OS=Brucella suis (strain ATCC 23445 / NCTC 10510)
GN=BSUIS_A0914 PE=3 SV=1
Length = 402
Score = 30.8 bits (68), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 34 VPQTNSFGHTFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWEC 93
V + FGHT + E E ++NF +H Q+ V K+ Y + + +S WE
Sbjct: 101 VALVHDFGHTPFGHTGEDALNERMKNFGGFDHNAQSLRIVTKLEHRYADFDGLNLS-WET 159
Query: 94 CELL 97
E L
Sbjct: 160 LEGL 163
>sp|C1EKC8|YHAM_BACC3 3'-5' exoribonuclease YhaM OS=Bacillus cereus (strain 03BB102)
GN=yhaM PE=3 SV=1
Length = 314
Score = 30.4 bits (67), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 116 LLQTAEAIRKDYP--DEDWLHLTGLIHDLGKVLNL 148
+L A+AI YP D+D L+ ++HDLGKV+ L
Sbjct: 167 MLDLAKAISNLYPSLDKDLLYAGVILHDLGKVIEL 201
>sp|B9ISF7|YHAM_BACCQ 3'-5' exoribonuclease YhaM OS=Bacillus cereus (strain Q1) GN=yhaM
PE=3 SV=1
Length = 314
Score = 30.4 bits (67), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 116 LLQTAEAIRKDYP--DEDWLHLTGLIHDLGKVLNL 148
+L A+AI YP D+D L+ ++HDLGKV+ L
Sbjct: 167 MLDLAKAISNLYPSLDKDLLYAGVILHDLGKVIEL 201
>sp|B7IK95|YHAM_BACC2 3'-5' exoribonuclease YhaM OS=Bacillus cereus (strain G9842)
GN=yhaM PE=3 SV=1
Length = 314
Score = 30.4 bits (67), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 116 LLQTAEAIRKDYP--DEDWLHLTGLIHDLGKVLNL 148
+L A+AI YP D+D L+ ++HDLGKV+ L
Sbjct: 167 MLDLAKAISNLYPSLDKDLLYAGVILHDLGKVIEL 201
>sp|B7JCU0|YHAM_BACC0 3'-5' exoribonuclease YhaM OS=Bacillus cereus (strain AH820)
GN=yhaM PE=3 SV=1
Length = 314
Score = 30.4 bits (67), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 116 LLQTAEAIRKDYP--DEDWLHLTGLIHDLGKVLNL 148
+L A+AI YP D+D L+ ++HDLGKV+ L
Sbjct: 167 MLDLAKAISNLYPSLDKDLLYAGVILHDLGKVIEL 201
>sp|Q81U72|YHAM_BACAN 3'-5' exoribonuclease YhaM OS=Bacillus anthracis GN=yhaM PE=3 SV=1
Length = 314
Score = 30.4 bits (67), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 116 LLQTAEAIRKDYP--DEDWLHLTGLIHDLGKVLNL 148
+L A+AI YP D+D L+ ++HDLGKV+ L
Sbjct: 167 MLDLAKAISNLYPSLDKDLLYAGVILHDLGKVIEL 201
>sp|C3LCZ8|YHAM_BACAC 3'-5' exoribonuclease YhaM OS=Bacillus anthracis (strain CDC 684 /
NRRL 3495) GN=yhaM PE=3 SV=1
Length = 314
Score = 30.4 bits (67), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 116 LLQTAEAIRKDYP--DEDWLHLTGLIHDLGKVLNL 148
+L A+AI YP D+D L+ ++HDLGKV+ L
Sbjct: 167 MLDLAKAISNLYPSLDKDLLYAGVILHDLGKVIEL 201
>sp|C3P2S0|YHAM_BACAA 3'-5' exoribonuclease YhaM OS=Bacillus anthracis (strain A0248)
GN=yhaM PE=3 SV=1
Length = 314
Score = 30.4 bits (67), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 116 LLQTAEAIRKDYP--DEDWLHLTGLIHDLGKVLNL 148
+L A+AI YP D+D L+ ++HDLGKV+ L
Sbjct: 167 MLDLAKAISNLYPSLDKDLLYAGVILHDLGKVIEL 201
>sp|Q6HME9|YHAM_BACHK 3'-5' exoribonuclease YhaM OS=Bacillus thuringiensis subsp.
konkukian (strain 97-27) GN=yhaM PE=3 SV=1
Length = 314
Score = 30.4 bits (67), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 116 LLQTAEAIRKDYP--DEDWLHLTGLIHDLGKVLNL 148
+L A+AI YP D+D L+ ++HDLGKV+ L
Sbjct: 167 MLDLAKAISNLYPSLDKDLLYAGVILHDLGKVIEL 201
>sp|Q63EZ0|YHAM_BACCZ 3'-5' exoribonuclease YhaM OS=Bacillus cereus (strain ZK / E33L)
GN=yhaM PE=3 SV=1
Length = 314
Score = 30.4 bits (67), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 116 LLQTAEAIRKDYP--DEDWLHLTGLIHDLGKVLNL 148
+L A+AI YP D+D L+ ++HDLGKV+ L
Sbjct: 167 MLDLAKAISNLYPSLDKDLLYAGVILHDLGKVIEL 201
>sp|Q81H06|YHAM_BACCR 3'-5' exoribonuclease YhaM OS=Bacillus cereus (strain ATCC 14579 /
DSM 31) GN=yhaM PE=3 SV=1
Length = 314
Score = 30.4 bits (67), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 116 LLQTAEAIRKDYP--DEDWLHLTGLIHDLGKVLNL 148
+L A+AI YP D+D L+ ++HDLGKV+ L
Sbjct: 167 MLDLAKAISNLYPSLDKDLLYAGVILHDLGKVIEL 201
>sp|B7HYS8|YHAM_BACC7 3'-5' exoribonuclease YhaM OS=Bacillus cereus (strain AH187)
GN=yhaM PE=3 SV=1
Length = 314
Score = 30.4 bits (67), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 116 LLQTAEAIRKDYP--DEDWLHLTGLIHDLGKVLNL 148
+L A+AI YP D+D L+ ++HDLGKV+ L
Sbjct: 167 MLDLAKAISNLYPSLDKDLLYAGVILHDLGKVIEL 201
>sp|B7HFZ0|YHAM_BACC4 3'-5' exoribonuclease YhaM OS=Bacillus cereus (strain B4264)
GN=yhaM PE=3 SV=1
Length = 314
Score = 30.4 bits (67), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 116 LLQTAEAIRKDYP--DEDWLHLTGLIHDLGKVLNL 148
+L A+AI YP D+D L+ ++HDLGKV+ L
Sbjct: 167 MLDLAKAISNLYPSLDKDLLYAGVILHDLGKVIEL 201
>sp|Q73CF4|YHAM_BACC1 3'-5' exoribonuclease YhaM OS=Bacillus cereus (strain ATCC 10987)
GN=yhaM PE=3 SV=1
Length = 314
Score = 30.4 bits (67), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 116 LLQTAEAIRKDYP--DEDWLHLTGLIHDLGKVLNL 148
+L A+AI YP D+D L+ ++HDLGKV+ L
Sbjct: 167 MLDLAKAISNLYPSLDKDLLYAGVILHDLGKVIEL 201
>sp|A0RAN0|YHAM_BACAH 3'-5' exoribonuclease YhaM OS=Bacillus thuringiensis (strain Al
Hakam) GN=yhaM PE=3 SV=1
Length = 314
Score = 30.4 bits (67), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 116 LLQTAEAIRKDYP--DEDWLHLTGLIHDLGKVLNL 148
+L A+AI YP D+D L+ ++HDLGKV+ L
Sbjct: 167 MLDLAKAISNLYPSLDKDLLYAGVILHDLGKVIEL 201
>sp|A7GLX6|YHAM_BACCN 3'-5' exoribonuclease YhaM OS=Bacillus cereus subsp. cytotoxis
(strain NVH 391-98) GN=yhaM PE=3 SV=1
Length = 318
Score = 30.4 bits (67), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 116 LLQTAEAIRKDYP--DEDWLHLTGLIHDLGKVLNL 148
+L A+AI YP D+D L+ ++HDLGKV+ L
Sbjct: 167 MLDLAKAISTLYPSLDKDLLYAGVILHDLGKVIEL 201
>sp|Q502K1|EXOG_DANRE Nuclease EXOG, mitochondrial OS=Danio rerio GN=exog PE=2 SV=2
Length = 343
Score = 30.0 bits (66), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 32/75 (42%), Gaps = 7/75 (9%)
Query: 39 SFGHTFRDYDAEGERQEGVENFYRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLN 98
S GH D + Q E FY N + Q Y+ G NR+EM E E +
Sbjct: 118 SRGHMAPAGDNKSSEQAMAETFYLSNIVPQNYE------NNAGFWNRLEMYCRELTEKFS 171
Query: 99 DVVDESDPDLDEPQI 113
DV S P L +PQI
Sbjct: 172 DVWVVSGP-LMKPQI 185
>sp|C1EMR8|CYSH_BACC3 Phosphoadenosine phosphosulfate reductase OS=Bacillus cereus
(strain 03BB102) GN=cysH PE=3 SV=1
Length = 234
Score = 30.0 bits (66), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 65 HINQTYDFVKKMREEYGKLNRVE----MSIWECCELLNDVVDESDPDL 108
H +TY+ ++K+RE + LN +E +++ E +L D + ES+P+L
Sbjct: 72 HFQETYELIQKVRERFPSLNIIEKQPKLTLNEQAKLHGDKLWESNPNL 119
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.141 0.436
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,543,316
Number of Sequences: 539616
Number of extensions: 3738901
Number of successful extensions: 9930
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 9903
Number of HSP's gapped (non-prelim): 65
length of query: 183
length of database: 191,569,459
effective HSP length: 110
effective length of query: 73
effective length of database: 132,211,699
effective search space: 9651454027
effective search space used: 9651454027
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)