BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030084
(183 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225437626|ref|XP_002278510.1| PREDICTED: nifU-like protein 1, chloroplastic [Vitis vinifera]
gi|297744011|emb|CBI36981.3| unnamed protein product [Vitis vinifera]
Length = 213
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 110/158 (69%), Positives = 128/158 (81%), Gaps = 15/158 (9%)
Query: 4 LSLTAATRISKTPTISSKSQFPTKFNERLQFISIKPKNSVLQKSGSHETAIRASNPSAPA 63
LS +A R+SKT K+Q + +KP +VLQ+ TAI+ASNPSAP+
Sbjct: 9 LSQNSAFRLSKTSVKPQKNQ---------PIVRLKPLRTVLQR-----TAIKASNPSAPS 54
Query: 64 GSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPS 123
GS PGLYSAH+F+LTAKNVDLVLEDVRPYLI+DGGN+DVVSVEDGV+S+KLQGACGSCPS
Sbjct: 55 GS-PGLYSAHKFELTAKNVDLVLEDVRPYLISDGGNVDVVSVEDGVISLKLQGACGSCPS 113
Query: 124 STTTMSMGIERVLKEKFGDAIKDIRQVYDEEVRETTVE 161
STTTM+MGIERVLKEKFGDA+KDIRQVYDE+ ETTVE
Sbjct: 114 STTTMTMGIERVLKEKFGDAVKDIRQVYDEQTGETTVE 151
>gi|224064633|ref|XP_002301529.1| predicted protein [Populus trichocarpa]
gi|222843255|gb|EEE80802.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/112 (79%), Positives = 100/112 (89%), Gaps = 2/112 (1%)
Query: 50 HETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGV 109
H+TAI+A+ P+ SSPGLYSA QF+L +NVDLVLE+VRPYLIADGGN+DVVSVEDGV
Sbjct: 45 HKTAIKATAPTG--SSSPGLYSAQQFELNPQNVDLVLEEVRPYLIADGGNVDVVSVEDGV 102
Query: 110 VSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIRQVYDEEVRETTVE 161
+S+KLQGACG CPSSTTTM MGIERVLKEKFGDAIKDIRQV DEE +ETTVE
Sbjct: 103 ISLKLQGACGDCPSSTTTMKMGIERVLKEKFGDAIKDIRQVSDEESKETTVE 154
Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 8/69 (11%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
+ T + V+ L+ +RP + GG+++V+SVE+G V+ G P S ++ GI+
Sbjct: 150 ETTVERVNGHLDILRPAITNFGGSVEVLSVENGECRVQYTG-----PES---IASGIKAA 201
Query: 136 LKEKFGDAI 144
+KEKF D +
Sbjct: 202 IKEKFPDIV 210
>gi|255548369|ref|XP_002515241.1| Nitrogen fixation protein nifU, putative [Ricinus communis]
gi|223545721|gb|EEF47225.1| Nitrogen fixation protein nifU, putative [Ricinus communis]
Length = 210
Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 101/161 (62%), Positives = 120/161 (74%), Gaps = 13/161 (8%)
Query: 1 MACLSLTAATRISKTPTISSKSQFPTKFNERLQFISIKPKNSVLQKSGSHETAIRASNPS 60
MA L+ TA ++I P K P + Q I++K + VL K TAI+A+ S
Sbjct: 1 MASLAFTAPSKI---PPYCPK--IPANTHRYPQSITMKTR-VVLSK-----TAIKAT--S 47
Query: 61 APAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGS 120
SPGLYSA +F+LT +NVDLVLEDVRPYLIADGGN+DVVSVEDGV+S++LQGACGS
Sbjct: 48 QTGSQSPGLYSAQKFELTPENVDLVLEDVRPYLIADGGNVDVVSVEDGVISLQLQGACGS 107
Query: 121 CPSSTTTMSMGIERVLKEKFGDAIKDIRQVYDEEVRETTVE 161
CPSSTTTM MGIERVLKEKFGD++KDIRQV DEEV+ETT E
Sbjct: 108 CPSSTTTMKMGIERVLKEKFGDSVKDIRQVNDEEVKETTPE 148
>gi|4558563|gb|AAD22656.1|AC007138_20 putative NifU-like metallocluster assembly factor [Arabidopsis
thaliana]
gi|7268578|emb|CAB80687.1| putative NifU-like metallocluster assembly factor [Arabidopsis
thaliana]
Length = 174
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/151 (60%), Positives = 114/151 (75%), Gaps = 6/151 (3%)
Query: 19 SSKSQFPTKFNERLQFISIKPKNSVLQKSG-SHETAIRASNPSA-----PAGSSPGLYSA 72
S+++ FP ++ F+ K + ++ H +AI S+ +G S GLYSA
Sbjct: 20 STRNGFPVISDQNPSFVLFANKRRHISRTAIFHRSAISGSSQGEKISPLASGVSSGLYSA 79
Query: 73 HQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGI 132
FDLT +NVDLVLEDVRP+LI+DGGN+DVVSVEDGVVS+KLQGAC SCPSS+TTM+MGI
Sbjct: 80 QTFDLTPQNVDLVLEDVRPFLISDGGNVDVVSVEDGVVSLKLQGACTSCPSSSTTMTMGI 139
Query: 133 ERVLKEKFGDAIKDIRQVYDEEVRETTVEVS 163
ERVLKEKFGDA+KDIRQV+DEEV++ TVEVS
Sbjct: 140 ERVLKEKFGDALKDIRQVFDEEVKQITVEVS 170
>gi|351727691|ref|NP_001238705.1| uncharacterized protein LOC100527356 [Glycine max]
gi|255632161|gb|ACU16433.1| unknown [Glycine max]
Length = 221
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/106 (82%), Positives = 96/106 (90%)
Query: 56 ASNPSAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQ 115
ASNP+ SSPGLYSA +FDLTA NVDLVL+DVRPYLIADGGN+DVVSVEDGVVS++L+
Sbjct: 52 ASNPNQNESSSPGLYSAKKFDLTASNVDLVLDDVRPYLIADGGNVDVVSVEDGVVSLRLE 111
Query: 116 GACGSCPSSTTTMSMGIERVLKEKFGDAIKDIRQVYDEEVRETTVE 161
GAC SCPSSTTTM+MGIERVLKEKFGDA+KDIRQVY E RETTVE
Sbjct: 112 GACESCPSSTTTMTMGIERVLKEKFGDAVKDIRQVYLTEPRETTVE 157
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 69 LYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTM 128
+Y + T + V+ LE +RP + GG+++VVSVE G VK G P S +
Sbjct: 146 VYLTEPRETTVEAVNNHLEILRPAIKNYGGSVEVVSVEGGECEVKYVG-----PDS---I 197
Query: 129 SMGIERVLKEKFGDAIK 145
GI+ +KEKF D +
Sbjct: 198 GSGIKATIKEKFPDILN 214
>gi|18411785|ref|NP_567219.1| NifU-like protein 1 [Arabidopsis thaliana]
gi|75163233|sp|Q93W77.1|NIFU1_ARATH RecName: Full=NifU-like protein 1, chloroplastic; Short=AtCNfu1;
Short=AtCnfU-IVb; Flags: Precursor
gi|14517434|gb|AAK62607.1| AT4g01940/T7B11_20 [Arabidopsis thaliana]
gi|15215670|gb|AAK91380.1| AT4g01940/T7B11_20 [Arabidopsis thaliana]
gi|20908090|gb|AAM26728.1| AT4g01940/T7B11_20 [Arabidopsis thaliana]
gi|28207816|emb|CAD55558.1| NFU1 protein [Arabidopsis thaliana]
gi|332656703|gb|AEE82103.1| NifU-like protein 1 [Arabidopsis thaliana]
Length = 231
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/149 (59%), Positives = 112/149 (75%), Gaps = 6/149 (4%)
Query: 19 SSKSQFPTKFNERLQFISIKPKNSVLQKSG-SHETAIRASNPSA-----PAGSSPGLYSA 72
S+++ FP ++ F+ K + ++ H +AI S+ +G S GLYSA
Sbjct: 21 STRNGFPVISDQNPSFVLFANKRRHISRTAIFHRSAISGSSQGEKISPLASGVSSGLYSA 80
Query: 73 HQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGI 132
FDLT +NVDLVLEDVRP+LI+DGGN+DVVSVEDGVVS+KLQGAC SCPSS+TTM+MGI
Sbjct: 81 QTFDLTPQNVDLVLEDVRPFLISDGGNVDVVSVEDGVVSLKLQGACTSCPSSSTTMTMGI 140
Query: 133 ERVLKEKFGDAIKDIRQVYDEEVRETTVE 161
ERVLKEKFGDA+KDIRQV+DEEV++ TVE
Sbjct: 141 ERVLKEKFGDALKDIRQVFDEEVKQITVE 169
>gi|357511421|ref|XP_003625999.1| NifU-like protein [Medicago truncatula]
gi|355501014|gb|AES82217.1| NifU-like protein [Medicago truncatula]
gi|388517667|gb|AFK46895.1| unknown [Medicago truncatula]
Length = 216
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/118 (72%), Positives = 101/118 (85%), Gaps = 1/118 (0%)
Query: 45 QKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVS 104
Q S + T IR+S+ + SSPGLYSA +F+LTA NVDLVLEDVRPYLI+DGGN+DVVS
Sbjct: 37 QNSRTSTTVIRSSSTANQNQSSPGLYSAQKFELTASNVDLVLEDVRPYLISDGGNVDVVS 96
Query: 105 VEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIRQVY-DEEVRETTVE 161
VE+GVVS+KLQGAC SCPSSTTTM MGIERVLKEKFGD+I+DI QV+ D++ RETTVE
Sbjct: 97 VENGVVSLKLQGACESCPSSTTTMKMGIERVLKEKFGDSIEDIVQVFDDDQARETTVE 154
>gi|449436401|ref|XP_004135981.1| PREDICTED: nifU-like protein 1, chloroplastic-like [Cucumis
sativus]
gi|449515245|ref|XP_004164660.1| PREDICTED: nifU-like protein 1, chloroplastic-like [Cucumis
sativus]
Length = 220
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 87/111 (78%), Positives = 95/111 (85%), Gaps = 2/111 (1%)
Query: 53 AIRAS--NPSAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVV 110
AIRAS N SSPGLYSA +F+LT NVDLVLEDVRPYLIADGGN+DVVSVEDGVV
Sbjct: 48 AIRASPSNSGPSTTSSPGLYSAQKFELTIGNVDLVLEDVRPYLIADGGNVDVVSVEDGVV 107
Query: 111 SVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIRQVYDEEVRETTVE 161
S+KL GACGSCPSSTTTM MGIERVLKEKFGD++K+I QVYDEE +ETT E
Sbjct: 108 SLKLVGACGSCPSSTTTMKMGIERVLKEKFGDSVKEICQVYDEEPKETTPE 158
>gi|224130940|ref|XP_002320962.1| predicted protein [Populus trichocarpa]
gi|222861735|gb|EEE99277.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/165 (55%), Positives = 117/165 (70%), Gaps = 11/165 (6%)
Query: 1 MACLSLTAATRI----SKTPTISSKSQFPTKFNERLQFISIKPKNSVLQKSGSHETAIRA 56
MA L+ TA +I K P+I S+ P + + + + QK TAI+A
Sbjct: 1 MASLASTALPKILPSCPKIPSIISRPCPPQSLTTKQRIPLVGIGRRIFQK-----TAIKA 55
Query: 57 SNPSAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQG 116
+ P+ SSPGL+SA QF+L +NVDLVLE+VRPYLI+DGGN+DVVSVEDGV+++KLQG
Sbjct: 56 TAPTG--SSSPGLHSAQQFELNPQNVDLVLEEVRPYLISDGGNVDVVSVEDGVITLKLQG 113
Query: 117 ACGSCPSSTTTMSMGIERVLKEKFGDAIKDIRQVYDEEVRETTVE 161
ACG+C SS TTM MGIERVLKEKFGDA++DIRQ+ EE +ETTVE
Sbjct: 114 ACGNCASSETTMKMGIERVLKEKFGDAVQDIRQLSFEEPKETTVE 158
>gi|388492810|gb|AFK34471.1| unknown [Lotus japonicus]
Length = 225
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/94 (82%), Positives = 88/94 (93%)
Query: 68 GLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTT 127
GLYSA +FDLTA NVDLVLEDVRPYLI+DGGN++VVSVE+GV+S+KLQGAC SCPSSTTT
Sbjct: 62 GLYSAAKFDLTAPNVDLVLEDVRPYLISDGGNVEVVSVENGVISLKLQGACESCPSSTTT 121
Query: 128 MSMGIERVLKEKFGDAIKDIRQVYDEEVRETTVE 161
M +GIERVLKEKFGDA+KDI QVYDEE +ETTVE
Sbjct: 122 MKLGIERVLKEKFGDAVKDIVQVYDEEPKETTVE 155
>gi|388501170|gb|AFK38651.1| unknown [Lotus japonicus]
Length = 211
Score = 165 bits (417), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 78/96 (81%), Positives = 88/96 (91%)
Query: 66 SPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSST 125
SPGLYSA + DLTA NVDLVLEDVRPYLI+DGGN++VVSVE+GV+S+KLQ AC SCPSST
Sbjct: 52 SPGLYSAAKIDLTAPNVDLVLEDVRPYLISDGGNVEVVSVENGVISLKLQRACESCPSST 111
Query: 126 TTMSMGIERVLKEKFGDAIKDIRQVYDEEVRETTVE 161
TTM +GIERVLKEKFGDA+KDI QVYDEE +ETTVE
Sbjct: 112 TTMKLGIERVLKEKFGDAVKDIVQVYDEEPKETTVE 147
>gi|223948699|gb|ACN28433.1| unknown [Zea mays]
gi|414866514|tpg|DAA45071.1| TPA: NFU3 [Zea mays]
Length = 221
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/148 (58%), Positives = 104/148 (70%), Gaps = 14/148 (9%)
Query: 25 PTKFNERLQFISIKPKNSVLQK-------SGSHE--TAIRASNPSAPAGSSPGLYSAHQF 75
P + R+ S P++ LQ SGS A AS P AP G GLYSA +
Sbjct: 15 PPRIRIRITKSSPLPRHRCLQSGPSKIWTSGSRACLVAASASTPPAPGG---GLYSAATY 71
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
+LT +NVD VL+DVRPYLI+DGGN+ VV+VEDGV+S+KL+GACGSCPSSTTTM+MGIERV
Sbjct: 72 ELTPENVDRVLDDVRPYLISDGGNVTVVAVEDGVISLKLEGACGSCPSSTTTMNMGIERV 131
Query: 136 LKEKFGDAIKDIRQVY--DEEVRETTVE 161
LKEKFGDA K+IRQV+ D+ ETT E
Sbjct: 132 LKEKFGDAFKEIRQVFDGDQPAAETTAE 159
>gi|226493520|ref|NP_001152596.1| LOC100286236 [Zea mays]
gi|195657915|gb|ACG48425.1| NFU3 [Zea mays]
Length = 221
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/148 (58%), Positives = 104/148 (70%), Gaps = 14/148 (9%)
Query: 25 PTKFNERLQFISIKPKNSVLQK-------SGSHE--TAIRASNPSAPAGSSPGLYSAHQF 75
P + R+ S P++ LQ SGS A AS P AP G GLYSA +
Sbjct: 15 PPRIRIRITKSSPLPRHRCLQSGPSKIWTSGSRACLVAASASTPPAPGG---GLYSAATY 71
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
+LT +NVD VL+DVRPYLI+DGGN+ VV+VEDGV+S+KL+GACGSCPSSTTTM+MGIERV
Sbjct: 72 ELTPENVDRVLDDVRPYLISDGGNVTVVAVEDGVISLKLEGACGSCPSSTTTMNMGIERV 131
Query: 136 LKEKFGDAIKDIRQVY--DEEVRETTVE 161
LKEKFGDA K+IRQV+ D+ ETT E
Sbjct: 132 LKEKFGDAFKEIRQVFDGDQPAAETTAE 159
>gi|357112515|ref|XP_003558054.1| PREDICTED: nifU-like protein 1, chloroplastic-like isoform 1
[Brachypodium distachyon]
gi|357112517|ref|XP_003558055.1| PREDICTED: nifU-like protein 1, chloroplastic-like isoform 2
[Brachypodium distachyon]
Length = 222
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 83/151 (54%), Positives = 104/151 (68%), Gaps = 10/151 (6%)
Query: 18 ISSKSQFPTKFNERLQFISIKPKN---SVLQKSG--SHETAIRASNPSAPAGSSPGLYSA 72
+SS Q P + +R + + + S ++ +G H A +S P P G GLY A
Sbjct: 13 LSSPPQIPLRIAKRSSLLPLWRHHFGASKIRTAGFRRHRAAASSSTPPTPGG---GLYEA 69
Query: 73 HQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGI 132
++LTA NVD VL+DVRPYLIADGG++ VVSVEDGVVS++L+GACGSCPSSTTTM MGI
Sbjct: 70 ATYELTADNVDRVLDDVRPYLIADGGDVAVVSVEDGVVSLRLEGACGSCPSSTTTMKMGI 129
Query: 133 ERVLKEKFGDAIKDIRQVY--DEEVRETTVE 161
ERVL EKFGDAI +IRQV+ D+ ETT E
Sbjct: 130 ERVLNEKFGDAIMEIRQVFDGDQSPAETTPE 160
>gi|222624810|gb|EEE58942.1| hypothetical protein OsJ_10617 [Oryza sativa Japonica Group]
Length = 224
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/87 (78%), Positives = 81/87 (93%)
Query: 68 GLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTT 127
GLYSA ++LTA+NVD VL+DVRPYLIADGG++ V SVEDGV+S+KL+GACGSCPSSTTT
Sbjct: 67 GLYSAETYELTAENVDRVLDDVRPYLIADGGDVTVASVEDGVISLKLEGACGSCPSSTTT 126
Query: 128 MSMGIERVLKEKFGDAIKDIRQVYDEE 154
M MGIERVLKEKFGDA+KDIRQV+D++
Sbjct: 127 MKMGIERVLKEKFGDAVKDIRQVFDDD 153
>gi|218192692|gb|EEC75119.1| hypothetical protein OsI_11301 [Oryza sativa Indica Group]
Length = 288
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 68/87 (78%), Positives = 81/87 (93%)
Query: 68 GLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTT 127
GLYSA ++LTA+NVD VL+DVRPYLIADGG++ V SVEDGV+S+KL+GACGSCPSSTTT
Sbjct: 67 GLYSAETYELTAENVDRVLDDVRPYLIADGGDVTVASVEDGVISLKLEGACGSCPSSTTT 126
Query: 128 MSMGIERVLKEKFGDAIKDIRQVYDEE 154
M MGIERVLKEKFGDA+KDIRQV+D++
Sbjct: 127 MKMGIERVLKEKFGDAVKDIRQVFDDD 153
>gi|115452669|ref|NP_001049935.1| Os03g0314700 [Oryza sativa Japonica Group]
gi|108707815|gb|ABF95610.1| NifU-like domain containing protein, expressed [Oryza sativa
Japonica Group]
gi|113548406|dbj|BAF11849.1| Os03g0314700 [Oryza sativa Japonica Group]
gi|215697309|dbj|BAG91303.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 224
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 68/87 (78%), Positives = 81/87 (93%)
Query: 68 GLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTT 127
GLYSA ++LTA+NVD VL+DVRPYLIADGG++ V SVEDGV+S+KL+GACGSCPSSTTT
Sbjct: 67 GLYSAETYELTAENVDRVLDDVRPYLIADGGDVTVASVEDGVISLKLEGACGSCPSSTTT 126
Query: 128 MSMGIERVLKEKFGDAIKDIRQVYDEE 154
M MGIERVLKEKFGDA+KDIRQV+D++
Sbjct: 127 MKMGIERVLKEKFGDAVKDIRQVFDDD 153
>gi|148907013|gb|ABR16650.1| unknown [Picea sitchensis]
Length = 465
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 70/102 (68%), Positives = 85/102 (83%)
Query: 65 SSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSS 124
S+ GLYSA DLT +NVDLVL DVRPYL+ADGGN++V SVEDGV+S++LQGACG+CPSS
Sbjct: 307 STSGLYSAVTHDLTPENVDLVLNDVRPYLVADGGNVEVASVEDGVISLRLQGACGTCPSS 366
Query: 125 TTTMSMGIERVLKEKFGDAIKDIRQVYDEEVRETTVEVSALL 166
TTTM MGIERVLKEKFGD +K+IRQV + + T V V++ L
Sbjct: 367 TTTMKMGIERVLKEKFGDVLKEIRQVDQQNIHATVVSVNSHL 408
>gi|242041121|ref|XP_002467955.1| hypothetical protein SORBIDRAFT_01g037130 [Sorghum bicolor]
gi|241921809|gb|EER94953.1| hypothetical protein SORBIDRAFT_01g037130 [Sorghum bicolor]
Length = 222
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 67/87 (77%), Positives = 81/87 (93%)
Query: 68 GLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTT 127
GLYSA ++LT +NVD VL+DVRPYLI+DGGN+ VV+VEDGV+S+KL+GACGSCPSSTTT
Sbjct: 65 GLYSAATYELTPENVDRVLDDVRPYLISDGGNVTVVAVEDGVISLKLEGACGSCPSSTTT 124
Query: 128 MSMGIERVLKEKFGDAIKDIRQVYDEE 154
M+MGIERVLKEKFGDA K+IRQV+DE+
Sbjct: 125 MNMGIERVLKEKFGDAFKEIRQVFDED 151
>gi|326494232|dbj|BAJ90385.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 224
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/95 (73%), Positives = 83/95 (87%), Gaps = 2/95 (2%)
Query: 69 LYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTM 128
LYSA ++LT NVD VL+DVRPYLI+DGG++ VVSVEDGVVS++L+GAC SCPSSTTTM
Sbjct: 68 LYSAATYELTPDNVDRVLDDVRPYLISDGGDVAVVSVEDGVVSLRLEGACSSCPSSTTTM 127
Query: 129 SMGIERVLKEKFGDAIKDIRQVY--DEEVRETTVE 161
+MGIERVLKEKFGDAIKDIRQV+ D++ ETT E
Sbjct: 128 NMGIERVLKEKFGDAIKDIRQVFDGDQQPEETTPE 162
>gi|2688826|gb|AAB88877.1| putative NifU protein [Prunus armeniaca]
Length = 76
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 66/75 (88%), Positives = 72/75 (96%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
+LT NVDLVLEDVRPYLIADGG++DVVSVEDGVVS+KLQGACGSCPSSTTTM MGIERV
Sbjct: 1 ELTVPNVDLVLEDVRPYLIADGGDVDVVSVEDGVVSLKLQGACGSCPSSTTTMKMGIERV 60
Query: 136 LKEKFGDAIKDIRQV 150
LKEKFGDA+KDI+QV
Sbjct: 61 LKEKFGDALKDIQQV 75
>gi|302784600|ref|XP_002974072.1| hypothetical protein SELMODRAFT_58377 [Selaginella moellendorffii]
gi|300158404|gb|EFJ25027.1| hypothetical protein SELMODRAFT_58377 [Selaginella moellendorffii]
Length = 162
Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 64/91 (70%), Positives = 79/91 (86%), Gaps = 2/91 (2%)
Query: 57 SNPSAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQG 116
SN S+ AGS GLYSA +D TA+NVD VL++VRPYL+ADGGN+ VVSV DG VS++LQG
Sbjct: 1 SNTSSTAGS--GLYSAETYDFTAENVDKVLDEVRPYLVADGGNVAVVSVADGTVSLELQG 58
Query: 117 ACGSCPSSTTTMSMGIERVLKEKFGDAIKDI 147
ACG+CPSST+TM MGIERVL+EKFGDA+K++
Sbjct: 59 ACGTCPSSTSTMKMGIERVLREKFGDAVKEV 89
>gi|302770961|ref|XP_002968899.1| hypothetical protein SELMODRAFT_16556 [Selaginella moellendorffii]
gi|300163404|gb|EFJ30015.1| hypothetical protein SELMODRAFT_16556 [Selaginella moellendorffii]
Length = 170
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/94 (67%), Positives = 79/94 (84%), Gaps = 2/94 (2%)
Query: 54 IRASNPSAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVK 113
+SN S+ AGS GLYS +D TA+NVD VL++VRPYL+ADGGN+ VVSV DG VS++
Sbjct: 9 FESSNTSSTAGS--GLYSTETYDFTAENVDKVLDEVRPYLVADGGNVAVVSVADGTVSLE 66
Query: 114 LQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDI 147
LQGACG+CPSST+TM MGIERVL+EKFGDA+K++
Sbjct: 67 LQGACGTCPSSTSTMKMGIERVLREKFGDAVKEV 100
>gi|302784594|ref|XP_002974069.1| hypothetical protein SELMODRAFT_16558 [Selaginella moellendorffii]
gi|300158401|gb|EFJ25024.1| hypothetical protein SELMODRAFT_16558 [Selaginella moellendorffii]
Length = 170
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/94 (67%), Positives = 79/94 (84%), Gaps = 2/94 (2%)
Query: 54 IRASNPSAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVK 113
+SN S+ AGS GLYSA +D TA+NVD VL++VRPYL+ADGGN+ VVSV DG VS++
Sbjct: 9 FESSNTSSTAGS--GLYSAETYDFTAENVDKVLDEVRPYLVADGGNVAVVSVADGTVSLE 66
Query: 114 LQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDI 147
LQ ACG+CPSST+TM MGIERVL+EKFGDA+K++
Sbjct: 67 LQRACGTCPSSTSTMKMGIERVLREKFGDAVKEV 100
>gi|168037489|ref|XP_001771236.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677477|gb|EDQ63947.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 165
Score = 132 bits (332), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 63/109 (57%), Positives = 84/109 (77%)
Query: 68 GLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTT 127
GLYSA ++ T +NVD VL++VRPYLIADGGN++VV+V+DGVVS++LQGACG+CPSST+T
Sbjct: 13 GLYSAETYEFTVENVDKVLDEVRPYLIADGGNVEVVAVKDGVVSLRLQGACGTCPSSTST 72
Query: 128 MSMGIERVLKEKFGDAIKDIRQVYDEEVRETTVEVSALLLCLISDKRYY 176
M MGIERVL EKFGD +K++ QV +++ + + V L L R Y
Sbjct: 73 MKMGIERVLMEKFGDVLKEVVQVDKQDIGASVLAVDEHLEMLRPAIRNY 121
>gi|307105277|gb|EFN53527.1| hypothetical protein CHLNCDRAFT_58507 [Chlorella variabilis]
Length = 496
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/96 (54%), Positives = 68/96 (70%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
++T + VD L+DVRPYLIADGGN+DVV+VEDG V ++LQGACG+CPSST TM MGIER
Sbjct: 337 LEMTVEAVDAALDDVRPYLIADGGNVDVVAVEDGRVFLQLQGACGTCPSSTATMKMGIER 396
Query: 135 VLKEKFGDAIKDIRQVYDEEVRETTVEVSALLLCLI 170
LK FG + ++ QV +E T E + L ++
Sbjct: 397 SLKAAFGKQLVEVLQVGGQEDNRATAEGVDMHLNML 432
>gi|384249933|gb|EIE23413.1| NifU-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 420
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 60/75 (80%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
DLT ++V+ L++VRPYLIADGGN++V S+ DGVV ++LQGACG+CPSS TM MGIER
Sbjct: 274 DLTPESVNAALDEVRPYLIADGGNVEVASISDGVVYLRLQGACGTCPSSAGTMKMGIERA 333
Query: 136 LKEKFGDAIKDIRQV 150
L+ FGD +K + QV
Sbjct: 334 LQGAFGDKLKGVLQV 348
>gi|308807973|ref|XP_003081297.1| nitrogen fixation NifU-like family protein (ISS) [Ostreococcus
tauri]
gi|116059759|emb|CAL55466.1| nitrogen fixation NifU-like family protein (ISS) [Ostreococcus
tauri]
Length = 186
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 68/90 (75%), Gaps = 1/90 (1%)
Query: 72 AHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMG 131
A +LT +NVD L++VRPYLIADGGN+++V+++DG++ V+L GACG+C SST TM G
Sbjct: 33 APTLELTMENVDAALDEVRPYLIADGGNVELVTIDDGMIVVRLNGACGTCASSTATMKGG 92
Query: 132 IERVLKEKFGDAIKDIRQVYDEEVRETTVE 161
IE++LK+KFG A+ ++ V + E TVE
Sbjct: 93 IEKLLKQKFGAAVDEVVNVSG-DAEEMTVE 121
>gi|302848639|ref|XP_002955851.1| hypothetical protein VOLCADRAFT_96828 [Volvox carteri f.
nagariensis]
gi|300258819|gb|EFJ43052.1| hypothetical protein VOLCADRAFT_96828 [Volvox carteri f.
nagariensis]
Length = 540
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 65/93 (69%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT + V LE+VRPYL+ADGG+++VV V+DG+V ++LQGAC SCPS + TM GIERV+
Sbjct: 395 LTVEAVQAALEEVRPYLMADGGDVEVVEVKDGIVYLRLQGACSSCPSQSATMKGGIERVI 454
Query: 137 KEKFGDAIKDIRQVYDEEVRETTVEVSALLLCL 169
++ FGD + DI Q+ E+ T V A L L
Sbjct: 455 RQTFGDQVIDILQLESEDPGATAERVDAALNML 487
>gi|384253504|gb|EIE26979.1| iron-sulfur cluster assembly protein [Coccomyxa subellipsoidea
C-169]
Length = 161
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 65/83 (78%), Gaps = 1/83 (1%)
Query: 72 AHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMG 131
+LT +NV+LVL+++RPYL+ADGGN+ +V ++ VV +KLQGACGSCPSS TTM+MG
Sbjct: 5 GQSLELTDENVELVLDEIRPYLMADGGNVQLVEIDGPVVYLKLQGACGSCPSSLTTMTMG 64
Query: 132 IERVLKEKFGDAIKDIRQVYDEE 154
I+R L+EK + I +I Q+ DE+
Sbjct: 65 IKRRLQEKIPE-ILEIEQIMDED 86
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLIA-DGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+LT N++ VL+++RPYL+ GG +++V + +V V++ G +S T+ + +
Sbjct: 89 LELTEDNIETVLDEIRPYLVGTGGGGLELVEISGPIVKVRITGPA----ASVMTVRVAVT 144
Query: 134 RVLKEKF 140
+ L+EKF
Sbjct: 145 QKLREKF 151
>gi|226495405|ref|NP_001148901.1| NFU3 [Zea mays]
gi|195623070|gb|ACG33365.1| NFU3 [Zea mays]
Length = 226
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 77/124 (62%), Gaps = 16/124 (12%)
Query: 46 KSGSHETAIRASN-PSAPAGSSP-GLYSAHQ-------------FDLTAKNVDLVLEDVR 90
+ G TA+RAS+ PS A S+P G Q LTA+NV++VL++VR
Sbjct: 29 RVGVASTAVRASSAPSLVASSAPLGRRRLRQVVQAVANPDPAIELPLTAENVEMVLDEVR 88
Query: 91 PYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIRQV 150
PYL+ADGGN+ + ++ VV +KLQGACGSCP+S TTM MGIER L EK + I + +
Sbjct: 89 PYLMADGGNVALHEIDGNVVRLKLQGACGSCPASVTTMKMGIERRLMEKIPE-IVAVEPI 147
Query: 151 YDEE 154
DEE
Sbjct: 148 ADEE 151
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLIA-DGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+L +N++ VL+++RPYL GG ++ V++E+ +V V+L G + T+ + +
Sbjct: 154 LELNQENIEKVLDEIRPYLAGTGGGELEFVTIEEPIVKVRLTGPA----AGVMTVRVALT 209
Query: 134 RVLKEKF 140
+ L+EK
Sbjct: 210 QKLREKI 216
>gi|449435134|ref|XP_004135350.1| PREDICTED: nifU-like protein 2, chloroplastic-like [Cucumis
sativus]
Length = 228
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 61/84 (72%), Gaps = 1/84 (1%)
Query: 71 SAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSM 130
SA + LT +NV+ VL++VRPYLIADGGN+ + ++ VV +KLQGACGSCPSS TTM M
Sbjct: 71 SALELPLTVENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQGACGSCPSSVTTMKM 130
Query: 131 GIERVLKEKFGDAIKDIRQVYDEE 154
GIER L EK + I + + DEE
Sbjct: 131 GIERRLMEKIPE-IVAVEPIADEE 153
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 43/67 (64%), Gaps = 5/67 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLI-ADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+L +N++ VLE++RPYL+ A GG++++V +E+ +V V++ G + T+ + +
Sbjct: 156 LELNEENIEKVLEEIRPYLVGAAGGSLELVGIEEPIVKVRITGPA----AGVMTVRVAVT 211
Query: 134 RVLKEKF 140
+ L+EK
Sbjct: 212 QKLREKI 218
>gi|413925508|gb|AFW65440.1| hypothetical protein ZEAMMB73_197216 [Zea mays]
Length = 184
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 83/142 (58%), Gaps = 21/142 (14%)
Query: 46 KSGSHETAIRA-SNPSAPAGSSP-GLYSAHQ-------------FDLTAKNVDLVLEDVR 90
+ G TA+RA S P A S+P G Q LTA+NV++VL++VR
Sbjct: 29 RVGVASTAVRACSAPRLVASSAPLGCRRLRQVVQAVANPDPAIELPLTAENVEMVLDEVR 88
Query: 91 PYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIRQV 150
PYL+ADGGN+ + ++ VV +KLQGACGSCP+S TTM MGIER L EK + I + +
Sbjct: 89 PYLMADGGNVALHEIDGNVVRLKLQGACGSCPASVTTMKMGIERRLMEKIPE-IVAVEPI 147
Query: 151 YDEEV-----RETTVEVSALLL 167
DEE +E +V+ LLL
Sbjct: 148 ADEETGLELNQENIEKVNVLLL 169
>gi|255576215|ref|XP_002529001.1| Nitrogen fixation protein nifU, putative [Ricinus communis]
gi|223531541|gb|EEF33371.1| Nitrogen fixation protein nifU, putative [Ricinus communis]
Length = 226
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 61/84 (72%), Gaps = 1/84 (1%)
Query: 71 SAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSM 130
SA + LTA+NV+ VL++VRPYLIADGGN+ + ++ VV +KLQGACGSCPSS TM M
Sbjct: 70 SALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKM 129
Query: 131 GIERVLKEKFGDAIKDIRQVYDEE 154
GIER L EK + I + + DEE
Sbjct: 130 GIERRLMEKIPE-IVAVEPIADEE 152
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 43/67 (64%), Gaps = 5/67 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLI-ADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+L +N++ VLE++RPYL+ A GG++++V++E+ + +++ G + T+ + +
Sbjct: 155 LELNEENIEKVLEEIRPYLVGAAGGSLELVAIEEPIAKIRITGPA----AGVMTVRVAVT 210
Query: 134 RVLKEKF 140
+ L+EK
Sbjct: 211 QKLREKI 217
>gi|449503323|ref|XP_004161945.1| PREDICTED: nifU-like protein 2, chloroplastic-like [Cucumis
sativus]
Length = 216
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 61/84 (72%), Gaps = 1/84 (1%)
Query: 71 SAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSM 130
SA + LT +NV+ VL++VRPYLIADGGN+ + ++ VV +KLQGACGSCPSS TTM M
Sbjct: 59 SALELPLTVENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQGACGSCPSSVTTMKM 118
Query: 131 GIERVLKEKFGDAIKDIRQVYDEE 154
GIER L EK + I + + DEE
Sbjct: 119 GIERRLMEKIPE-IVAVEPIADEE 141
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 43/67 (64%), Gaps = 5/67 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLI-ADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+L +N++ VLE++RPYL+ A GG++++V +E+ +V V++ G + T+ + +
Sbjct: 144 LELNEENIEKVLEEIRPYLVGAAGGSLELVGIEEPIVKVRITGPA----AGVMTVRVAVT 199
Query: 134 RVLKEKF 140
+ L+EK
Sbjct: 200 QKLREKI 206
>gi|357157352|ref|XP_003577769.1| PREDICTED: nifU-like protein 2, chloroplastic-like [Brachypodium
distachyon]
Length = 223
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Query: 72 AHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMG 131
A + LTA+NV+LVL++VRPYL+ADGGN+ + + VV +KLQGACGSCP+S TTM MG
Sbjct: 67 AVELPLTAENVELVLDEVRPYLMADGGNVVLHEINGNVVRLKLQGACGSCPASVTTMKMG 126
Query: 132 IERVLKEKFGDAIKDIRQVYDEE 154
IER L EK + I + + DEE
Sbjct: 127 IERRLMEKIPE-IVAVEPIADEE 148
Score = 42.4 bits (98), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLIA-DGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+L +N++ VL+++RPYL GG ++ VS+E+ +V V+L G + T+ + +
Sbjct: 151 LELNEENIEKVLDEIRPYLSGTGGGELEFVSIEEPIVKVRLTGPA----AGVMTVRVALT 206
Query: 134 RVLKEKF 140
+ L+EK
Sbjct: 207 QKLREKI 213
>gi|412992744|emb|CCO18724.1| NifU-like protein [Bathycoccus prasinos]
Length = 227
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 70/108 (64%), Gaps = 8/108 (7%)
Query: 45 QKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVS 104
+KS S T RA+ P +LT NV+ VL++VRPYLI+DGGN+++V
Sbjct: 52 KKSSSSPTTTRAAG-------EPASSINETLELTGDNVEKVLDEVRPYLISDGGNVELVE 104
Query: 105 VEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIRQVYD 152
++ VV ++LQGACGSCPSST TM MGIER L EK + I+++ Q+ D
Sbjct: 105 IDGLVVKLRLQGACGSCPSSTVTMRMGIERRLMEKIPE-IQEVMQLVD 151
Score = 35.8 bits (81), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 81 NVDLVLEDVRPYLIA-DGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
N++ L+++RPYL GG +++V V+ +V VKL G + T+ + + + L+EK
Sbjct: 162 NIEATLDEIRPYLAGTGGGELELVEVDAPIVKVKLTGPA----AKVMTVRVAVTQKLREK 217
Query: 140 F 140
Sbjct: 218 I 218
>gi|238014236|gb|ACR38153.1| unknown [Zea mays]
gi|413925507|gb|AFW65439.1| NFU3 [Zea mays]
Length = 226
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 75/124 (60%), Gaps = 16/124 (12%)
Query: 46 KSGSHETAIRA-SNPSAPAGSSP-GLYSAHQ-------------FDLTAKNVDLVLEDVR 90
+ G TA+RA S P A S+P G Q LTA+NV++VL++VR
Sbjct: 29 RVGVASTAVRACSAPRLVASSAPLGCRRLRQVVQAVANPDPAIELPLTAENVEMVLDEVR 88
Query: 91 PYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIRQV 150
PYL+ADGGN+ + ++ VV +KLQGACGSCP+S TTM MGIER L EK + I + +
Sbjct: 89 PYLMADGGNVALHEIDGNVVRLKLQGACGSCPASVTTMKMGIERRLMEKIPE-IVAVEPI 147
Query: 151 YDEE 154
DEE
Sbjct: 148 ADEE 151
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLIA-DGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+L +N++ VL+++RPYL GG ++ V++E+ +V V+L G + T+ + +
Sbjct: 154 LELNQENIEKVLDEIRPYLAGTGGGELEFVTIEEPIVKVRLTGPA----AGVMTVRVALT 209
Query: 134 RVLKEKF 140
+ L+EK
Sbjct: 210 QKLREKI 216
>gi|326530153|dbj|BAK08356.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 227
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
Query: 72 AHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMG 131
A + LTA+NV+LVL++VRPYL+ADGGN+ + ++ VV +KLQGACGSCP+S TTM MG
Sbjct: 71 AVELPLTAENVELVLDEVRPYLMADGGNVVLHEIDGNVVRLKLQGACGSCPASVTTMKMG 130
Query: 132 IERVLKEKFGDAIKDIRQVYDEE 154
IER L EK + + + + DEE
Sbjct: 131 IERRLMEKIPEIVA-VEPIADEE 152
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLIA-DGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+L +N++ VL+++RPYL GG ++ VS+E+ +V V+L G + T+ + +
Sbjct: 155 LELNEENIEKVLDEIRPYLSGTGGGELEFVSIEEPIVKVRLTGPA----AGVMTVRVALT 210
Query: 134 RVLKEKF 140
+ L+EK
Sbjct: 211 QKLREKI 217
>gi|326526691|dbj|BAK00734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 225
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
Query: 72 AHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMG 131
A + LTA+NV+LVL++VRPYL+ADGGN+ + ++ VV +KLQGACGSCP+S TTM MG
Sbjct: 69 AVELPLTAENVELVLDEVRPYLMADGGNVVLHEIDGNVVRLKLQGACGSCPASVTTMKMG 128
Query: 132 IERVLKEKFGDAIKDIRQVYDEE 154
IER L EK + + + + DEE
Sbjct: 129 IERRLMEKIPEIVA-VEPIADEE 150
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLIA-DGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+L +N++ VL+++RPYL GG ++ VS+E+ +V V+L G + T+ + +
Sbjct: 153 LELNEENIEKVLDEIRPYLSGTGGGELEFVSIEEPIVKVRLTGPA----AGVMTVRVALT 208
Query: 134 RVLKEKF 140
+ L+EK
Sbjct: 209 QKLREKI 215
>gi|218185367|gb|EEC67794.1| hypothetical protein OsI_35353 [Oryza sativa Indica Group]
Length = 228
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
Query: 72 AHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMG 131
A + LTA+NV++VL++VRPYL+ADGGN+ + ++ VV +KLQGACGSCP+S TTM MG
Sbjct: 72 AVELPLTAENVEIVLDEVRPYLMADGGNVALHEIDGNVVRLKLQGACGSCPASVTTMKMG 131
Query: 132 IERVLKEKFGDAIKDIRQVYDEE 154
IER L EK + I + + DEE
Sbjct: 132 IERRLMEKIPE-IVAVEPIADEE 153
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLIA-DGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+L +N++ VL+++RPYL GG ++ V++E+ +V V+L G + T+ + +
Sbjct: 156 LELNQENIEKVLDEIRPYLSGTGGGELEFVAIEEPIVKVRLTGPA----AGVMTVRVALT 211
Query: 134 RVLKEKF 140
+ L+EK
Sbjct: 212 QKLREKI 218
>gi|115484477|ref|NP_001065900.1| Os11g0181500 [Oryza sativa Japonica Group]
gi|108864066|gb|ABG22389.1| nitrogen fixation protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113644604|dbj|BAF27745.1| Os11g0181500 [Oryza sativa Japonica Group]
gi|215695304|dbj|BAG90495.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765607|dbj|BAG87304.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222615626|gb|EEE51758.1| hypothetical protein OsJ_33192 [Oryza sativa Japonica Group]
Length = 228
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
Query: 72 AHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMG 131
A + LTA+NV++VL++VRPYL+ADGGN+ + ++ VV +KLQGACGSCP+S TTM MG
Sbjct: 72 AVELPLTAENVEIVLDEVRPYLMADGGNVALHEIDGNVVRLKLQGACGSCPASVTTMKMG 131
Query: 132 IERVLKEKFGDAIKDIRQVYDEE 154
IER L EK + I + + DEE
Sbjct: 132 IERRLMEKIPE-IVAVEPIADEE 153
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLIA-DGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+L +N++ VL+++RPYL GG ++ V++E+ +V V+L G + T+ + +
Sbjct: 156 LELNQENIEKVLDEIRPYLSGTGGGELEFVAIEEPIVKVRLTGPA----AGVMTVRVALT 211
Query: 134 RVLKEKF 140
+ L+EK
Sbjct: 212 QKLREKI 218
>gi|427713184|ref|YP_007061808.1| thioredoxin-like protein [Synechococcus sp. PCC 6312]
gi|427377313|gb|AFY61265.1| thioredoxin-like protein [Synechococcus sp. PCC 6312]
Length = 80
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
Query: 72 AHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMG 131
A +LT +N++ VL+++RPYL+ADGGN++VV VE +V ++LQGACGSCPSST T+ MG
Sbjct: 2 AATLELTHENIEKVLDELRPYLMADGGNVEVVEVEGPIVRLRLQGACGSCPSSTMTLRMG 61
Query: 132 IERVLKEKFGDAIKDIRQVY 151
IER LKE + I ++ QV+
Sbjct: 62 IERKLKESIPE-IAEVEQVF 80
>gi|255083372|ref|XP_002504672.1| predicted protein [Micromonas sp. RCC299]
gi|226519940|gb|ACO65930.1| predicted protein [Micromonas sp. RCC299]
Length = 192
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 72/108 (66%), Gaps = 11/108 (10%)
Query: 56 ASNPSAPAGS---------SPGLYS-AHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSV 105
AS P AGS + G S + + +LTA NV+ VL++VRPYLIADGG++++V +
Sbjct: 10 ASRPGRAAGSRVRRIVTVRAAGESSISEKLELTADNVEKVLDEVRPYLIADGGDVELVEI 69
Query: 106 EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIRQVYDE 153
+ VV +KL GACGSCPSST TM MGIE+ L EK + I ++ Q+ DE
Sbjct: 70 DGLVVRLKLNGACGSCPSSTVTMRMGIEKRLMEKIPE-IMEVEQIQDE 116
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 72 AHQFDLTAKNVDLVLEDVRPYLIA-DGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSM 130
A DLT +NV+ L+++RPYL GG +++V +ED +V V+L G +S T+ +
Sbjct: 117 AGGLDLTEENVEATLDEIRPYLAGTGGGQLELVDIEDPIVKVRLTGPA----ASVMTVRV 172
Query: 131 GIERVLKEKF 140
+ + L+EK
Sbjct: 173 AVTQKLREKM 182
>gi|428222573|ref|YP_007106743.1| thioredoxin-like protein [Synechococcus sp. PCC 7502]
gi|427995913|gb|AFY74608.1| thioredoxin-like protein [Synechococcus sp. PCC 7502]
Length = 78
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
DLT++NV+ VL+++RPYL++DGGN+++V +E VV ++LQGACGSCPSS T+ MGIER
Sbjct: 3 LDLTSENVETVLDELRPYLLSDGGNVELVEIEGPVVKLRLQGACGSCPSSAMTLRMGIER 62
Query: 135 VLKEKFGDAIKDIRQVY 151
L+E D I ++ QVY
Sbjct: 63 KLRESIPD-IGEVEQVY 78
>gi|358248207|ref|NP_001239839.1| uncharacterized protein LOC100803112 [Glycine max]
gi|255637868|gb|ACU19253.1| unknown [Glycine max]
Length = 219
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Query: 72 AHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMG 131
A + LTA+NV+ VL+++RPYLIADGGN+ + ++ VV +KLQGACGSCPSS TTM MG
Sbjct: 64 AVELPLTAENVESVLDEIRPYLIADGGNVALHQIDGNVVRLKLQGACGSCPSSVTTMKMG 123
Query: 132 IERVLKEKFGDAIKDIRQVYDEE 154
IER L EK + + + + DEE
Sbjct: 124 IERRLMEKIPEIVA-VEPIADEE 145
Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLI-ADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+L N++ VLE++RPYL+ A G +++V++++ +V V++ G +S T+ + +
Sbjct: 148 LELNEDNIEKVLEEMRPYLVGAADGTLELVAIDEPIVKVRITGPA----ASVLTVRVAVT 203
Query: 134 RVLKEKF 140
+ L+EK
Sbjct: 204 QKLREKI 210
>gi|242067665|ref|XP_002449109.1| hypothetical protein SORBIDRAFT_05g005270 [Sorghum bicolor]
gi|241934952|gb|EES08097.1| hypothetical protein SORBIDRAFT_05g005270 [Sorghum bicolor]
Length = 225
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
Query: 72 AHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMG 131
A + LTA+NV++VL++VRPYL+ADGGN+ + ++ +V +KLQGACGSCP+S TTM MG
Sbjct: 69 AIKLPLTAENVEMVLDEVRPYLMADGGNVALHEIDGNMVRLKLQGACGSCPASVTTMKMG 128
Query: 132 IERVLKEKFGDAIKDIRQVYDEE 154
IER L EK + I + + DEE
Sbjct: 129 IERRLMEKIPE-IVAVEPIADEE 150
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLIA-DGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+L +N++ VL+++RPYL GG ++ V++E+ +V V+L G + T+ + +
Sbjct: 153 LELNQENIEKVLDEIRPYLAGTGGGELEFVTIEEPIVKVRLTGPA----AGVMTVRVALT 208
Query: 134 RVLKEKF 140
+ L+EK
Sbjct: 209 QKLREKI 215
>gi|168012112|ref|XP_001758746.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689883|gb|EDQ76252.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 153
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 61/80 (76%), Gaps = 1/80 (1%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
+LT +NV+LVL++VRPYLI+DGGN+ + ++ VV +KLQGACGSCPSST TM MGIER
Sbjct: 1 LELTEENVELVLDEVRPYLISDGGNVALHEIDGLVVKLKLQGACGSCPSSTMTMRMGIER 60
Query: 135 VLKEKFGDAIKDIRQVYDEE 154
L E+ + + + Q+ DEE
Sbjct: 61 RLIERIPEIVA-VEQIMDEE 79
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLIA-DGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
LT +NV+ VL ++RPYL+ GG +++V ++ VV V+L G +S T+ + +
Sbjct: 82 LALTEENVEAVLGEIRPYLVGTGGGELELVKIDGPVVKVRLGGPA----ASVMTVRVAVT 137
Query: 134 RVLKEKF 140
+ L+EK
Sbjct: 138 QKLREKI 144
>gi|62734078|gb|AAX96187.1| Similar to seven transmembrane protein Mlo4 [Oryza sativa Japonica
Group]
Length = 980
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
Query: 72 AHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMG 131
A + LTA+NV++VL++VRPYL+ADGGN+ + ++ VV +KLQGACGSCP+S TTM MG
Sbjct: 565 AVELPLTAENVEIVLDEVRPYLMADGGNVALHEIDGNVVRLKLQGACGSCPASVTTMKMG 624
Query: 132 IERVLKEKFGDAIKDIRQVYDEE 154
IER L EK + + + + DEE
Sbjct: 625 IERRLMEKIPEIVA-VEPIADEE 646
Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLIA-DGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+L +N++ VL+++RPYL GG ++ V++E+ +V V+L G + T+ + +
Sbjct: 649 LELNQENIEKVLDEIRPYLSGTGGGELEFVAIEEPIVKVRLTGP----AAGVMTVRVALT 704
Query: 134 RVLKEK 139
+ L+EK
Sbjct: 705 QKLREK 710
>gi|159474062|ref|XP_001695148.1| iron-sulfur cluster assembly protein [Chlamydomonas reinhardtii]
gi|158276082|gb|EDP01856.1| iron-sulfur cluster assembly protein [Chlamydomonas reinhardtii]
Length = 154
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
+LT +NV+ VL++VRPYL+ADGGN++ + ++ VV +KLQGACGSCPSSTTTM+MGI+R
Sbjct: 2 MELTPENVEKVLDEVRPYLMADGGNVEFMEIDGLVVKLKLQGACGSCPSSTTTMTMGIKR 61
Query: 135 VLKEKFGDAIKDIRQVYDE 153
L E+ + I D+ QV +E
Sbjct: 62 RLMERIPE-ILDVEQVTEE 79
Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLIA-DGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+L + NV+ VL ++RPYL+ GG +++V+++ +V VK+ G ++ T+ + +
Sbjct: 83 LELNSDNVETVLNEIRPYLVGTGGGGLELVAIDGVIVKVKISGPA----ANVMTVRVAVT 138
Query: 134 RVLKEKF 140
+ L+EK
Sbjct: 139 QKLREKI 145
>gi|116781227|gb|ABK22014.1| unknown [Picea sitchensis]
Length = 238
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 61/78 (78%), Gaps = 1/78 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +N++++L++VRPYL+ADGGN+++ ++ VV++KLQGACGSCPSS TTM GIE L
Sbjct: 88 LTVENIEMILDEVRPYLMADGGNVELHEIDGNVVTLKLQGACGSCPSSMTTMKTGIEGRL 147
Query: 137 KEKFGDAIKDIRQVYDEE 154
EK + I ++QV+D E
Sbjct: 148 MEKIPEIIA-VKQVFDME 164
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLIA-DGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+LT +NV+ +L ++RPYL GG+++ V ++D VV V++ G + T+ + +
Sbjct: 167 LELTEENVEKILAEIRPYLSGTGGGDLEFVKIDDPVVKVRISGPA----AEVMTVRVALT 222
Query: 134 RVLKEKF 140
+ L+EK
Sbjct: 223 QKLREKI 229
>gi|428781577|ref|YP_007173363.1| thioredoxin-like protein [Dactylococcopsis salina PCC 8305]
gi|428695856|gb|AFZ52006.1| thioredoxin-like protein [Dactylococcopsis salina PCC 8305]
Length = 82
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Query: 74 QFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+ LT +NV+ VL+D+RPYL+ADGGN+D+V +E +V +KLQGACGSCPSS T+ MGIE
Sbjct: 5 KLALTPENVEKVLDDLRPYLMADGGNVDLVEIEGPIVKLKLQGACGSCPSSAMTLKMGIE 64
Query: 134 RVLKEKFGDAIKDIRQVYD 152
R L+E F I ++ QV +
Sbjct: 65 RRLRE-FIPEIAEVEQVLN 82
>gi|357445313|ref|XP_003592934.1| NifU-like protein [Medicago truncatula]
gi|355481982|gb|AES63185.1| NifU-like protein [Medicago truncatula]
Length = 224
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 72 AHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMG 131
A + LTA+NV+ VL+++RPYLI+DGGN+ + ++ VV +KLQGACGSCPSS TM MG
Sbjct: 69 AVELPLTAENVETVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMG 128
Query: 132 IERVLKEKFGDAIKDIRQVYDEE 154
IER L EK + I + V DEE
Sbjct: 129 IERRLMEKIPE-IVAVEPVTDEE 150
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 43/67 (64%), Gaps = 5/67 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLI-ADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+L +N++ VLE++RPYL+ A GG +++V++E+ +V V++ G + T+ + +
Sbjct: 153 LELNDENIEKVLEELRPYLVGAAGGTLELVAIEEPIVKVRITGPA----AGVMTVRVAVT 208
Query: 134 RVLKEKF 140
+ L+EK
Sbjct: 209 QKLREKI 215
>gi|86605616|ref|YP_474379.1| NifU domain-containing protein [Synechococcus sp. JA-3-3Ab]
gi|86554158|gb|ABC99116.1| NifU domain protein [Synechococcus sp. JA-3-3Ab]
Length = 80
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 61/80 (76%), Gaps = 1/80 (1%)
Query: 72 AHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMG 131
A +LTA+NV+ VL ++RPYL ADGGN+++V ++ VV ++LQGACG+CPSST T+ MG
Sbjct: 2 AQALELTAENVEKVLNELRPYLQADGGNVELVEIDGPVVKLRLQGACGACPSSTLTLKMG 61
Query: 132 IERVLKEKFGDAIKDIRQVY 151
IER L+E D I ++ QV+
Sbjct: 62 IERKLRESIPD-ILEVEQVF 80
>gi|298706477|emb|CBJ29464.1| iron-sulfur cluster assembly protein, similar to nifU [Ectocarpus
siliculosus]
Length = 494
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 54/70 (77%), Gaps = 2/70 (2%)
Query: 73 HQFDLTAKNVDLVLEDVRPYLIADGGNIDV--VSVEDGVVSVKLQGACGSCPSSTTTMSM 130
+ + T +NVD VL++VRPYLIADGGN+ V V ++ VV + LQGACGSCPSSTTTM M
Sbjct: 339 NDLEFTLENVDKVLDEVRPYLIADGGNVRVMGVDIDRRVVKLALQGACGSCPSSTTTMKM 398
Query: 131 GIERVLKEKF 140
GIERVL E F
Sbjct: 399 GIERVLNENF 408
>gi|225448154|ref|XP_002264418.1| PREDICTED: nifU-like protein 2, chloroplastic [Vitis vinifera]
gi|297739542|emb|CBI29724.3| unnamed protein product [Vitis vinifera]
Length = 227
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 61/84 (72%), Gaps = 1/84 (1%)
Query: 71 SAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSM 130
SA + LTA+NV+ VL+++RPYLI+DGGN+ + ++ VV +KLQGACGSCPSS TM M
Sbjct: 71 SAVELPLTAENVESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKM 130
Query: 131 GIERVLKEKFGDAIKDIRQVYDEE 154
GIER L EK + I + + DEE
Sbjct: 131 GIERRLMEKIPE-IVAVEPIADEE 153
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 43/67 (64%), Gaps = 5/67 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLI-ADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+L +N++ VLE++RPYL+ A GG++++V +++ +V V++ G + T+ + +
Sbjct: 156 LELNEENIEKVLEEIRPYLVGAAGGSLELVGIDEPIVKVRITGPA----AGVMTVRVAVT 211
Query: 134 RVLKEKF 140
+ L+EK
Sbjct: 212 QKLREKI 218
>gi|428304593|ref|YP_007141418.1| nitrogen-fixing NifU domain-containing protein [Crinalium
epipsammum PCC 9333]
gi|428246128|gb|AFZ11908.1| nitrogen-fixing NifU domain-containing protein [Crinalium
epipsammum PCC 9333]
Length = 82
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Query: 69 LYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTM 128
+ + +LT +NV+ VL+D+RPYL++DGGN+++V +E +V ++LQGACGSCPSS T+
Sbjct: 1 MSATQTMELTTENVEKVLDDLRPYLMSDGGNVELVEIEGPIVKLRLQGACGSCPSSAMTL 60
Query: 129 SMGIERVLKEKFGDAIKDIRQVY 151
MGIER L E F I +I QV+
Sbjct: 61 KMGIERRLME-FIPEIAEIEQVF 82
>gi|428774789|ref|YP_007166576.1| nitrogen-fixing NifU domain-containing protein [Halothece sp. PCC
7418]
gi|428689068|gb|AFZ42362.1| nitrogen-fixing NifU domain protein [Halothece sp. PCC 7418]
Length = 82
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Query: 74 QFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+ LT +NV+ VL+++RPYL+ADGGN+D+V +E +V +KLQGACGSCPSS T+ MGIE
Sbjct: 5 KLALTPENVEKVLDELRPYLMADGGNVDLVEIEGPIVKLKLQGACGSCPSSAMTLKMGIE 64
Query: 134 RVLKEKFGDAIKDIRQVYD 152
R L+E F I ++ QV +
Sbjct: 65 RRLRE-FIPEIAEVEQVLN 82
>gi|22298836|ref|NP_682083.1| NifU protein [Thermosynechococcus elongatus BP-1]
gi|22295017|dbj|BAC08845.1| tsl1293 [Thermosynechococcus elongatus BP-1]
Length = 89
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
Query: 72 AHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMG 131
A +L+ +NV+ VL+++RPYL+ADGGN+++V +E VV ++LQGACG+CPSST T+ MG
Sbjct: 11 AATLELSQENVEKVLDELRPYLMADGGNVELVEIEGPVVRLRLQGACGACPSSTMTLRMG 70
Query: 132 IERVLKEKFGDAIKDIRQVY 151
IER LKE + I +++QV
Sbjct: 71 IERKLKESIPE-IAEVQQVL 89
>gi|145350853|ref|XP_001419810.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580042|gb|ABO98103.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 73
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 59/73 (80%)
Query: 78 TAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
T +NVD L++VRPYL+ADGGN+++V +E ++ V+L GACG+C SS+ TM GIE++LK
Sbjct: 1 TMENVDEALDEVRPYLVADGGNVELVKIEGKIIVVRLNGACGTCASSSATMKGGIEKLLK 60
Query: 138 EKFGDAIKDIRQV 150
+KFGDA++++ V
Sbjct: 61 QKFGDAVEEVVDV 73
>gi|308808272|ref|XP_003081446.1| NifU-like domain-containing proteins (ISS) [Ostreococcus tauri]
gi|116059909|emb|CAL55968.1| NifU-like domain-containing proteins (ISS) [Ostreococcus tauri]
Length = 203
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
+LTA N++ VL++VRPYLIADGG++++V ++ V +KL+GACGSCPSST TM MGIE+
Sbjct: 50 LELTADNIEKVLDEVRPYLIADGGDVELVEIDGLSVKLKLKGACGSCPSSTVTMRMGIEK 109
Query: 135 VLKEKFGDAIKDIRQVYDE 153
L EK D I ++ Q+ DE
Sbjct: 110 RLLEKIPD-IMEVIQIEDE 127
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNI-DVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
LT +NV+ L ++RPYL GG + +++ +E+ +V V+L G + T+ + + +
Sbjct: 133 LTEENVEQTLNEIRPYLAGTGGGVLELLDIEEPIVKVRLTGPA----AKVMTVRVAVTQK 188
Query: 136 LKEKF 140
L+EK
Sbjct: 189 LREKI 193
>gi|346467251|gb|AEO33470.1| hypothetical protein [Amblyomma maculatum]
Length = 211
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
Query: 74 QFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+ LTA+NV+ VL++VRPYLI+DGGN+ + ++ VV +KLQGACGSCPSS TM MGI+
Sbjct: 91 ELPLTAENVESVLDEVRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIQ 150
Query: 134 RVLKEKFGDAIKDIRQVYDEE 154
R L EK + + + V DEE
Sbjct: 151 RRLMEKIPEIVA-VEPVTDEE 170
>gi|434400564|ref|YP_007134568.1| nitrogen-fixing NifU domain-containing protein [Stanieria
cyanosphaera PCC 7437]
gi|428271661|gb|AFZ37602.1| nitrogen-fixing NifU domain-containing protein [Stanieria
cyanosphaera PCC 7437]
Length = 78
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 59/73 (80%), Gaps = 1/73 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NV+ VL+++RPYL+ADGGN+++V +E +V ++LQGACGSCPSST T+ MGIER L
Sbjct: 5 LTEQNVEEVLDEMRPYLMADGGNVELVEIEGPIVKLRLQGACGSCPSSTMTLKMGIERRL 64
Query: 137 KEKFGDAIKDIRQ 149
+EK + I ++ Q
Sbjct: 65 REKIPE-IAEVEQ 76
>gi|297792273|ref|XP_002864021.1| hypothetical protein ARALYDRAFT_331396 [Arabidopsis lyrata subsp.
lyrata]
gi|297309856|gb|EFH40280.1| hypothetical protein ARALYDRAFT_331396 [Arabidopsis lyrata subsp.
lyrata]
Length = 707
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NV+ VL+++RPYL++DGGN+ + ++ +V VKLQGACGSCPSST TM MGIER L
Sbjct: 84 LTEENVESVLDEIRPYLMSDGGNVALHEIDGNIVRVKLQGACGSCPSSTMTMKMGIERRL 143
Query: 137 KEKFGDAIKDIRQVYDEE 154
EK + + + V DEE
Sbjct: 144 MEKIPEIVA-VEAVADEE 160
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADG-GNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+L +N++ VLE++RPYLI G++D+V +ED +V +++ G T+ + +
Sbjct: 163 LELNEENIEKVLEEIRPYLIGTADGSLDLVEIEDPIVKIRITGPAAGV----MTVRVAVT 218
Query: 134 RVLKEK 139
+ L+EK
Sbjct: 219 QKLREK 224
>gi|86608468|ref|YP_477230.1| NifU domain-containing protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557010|gb|ABD01967.1| NifU domain protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 80
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
Query: 72 AHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMG 131
A +L +NV+ VL ++RPYL+ADGGN+++V ++ VV ++LQGACG+CPSST T+ MG
Sbjct: 2 AQALELNTENVEKVLNELRPYLMADGGNVELVEIDGPVVKLRLQGACGACPSSTMTLKMG 61
Query: 132 IERVLKEKFGDAIKDIRQVY 151
IER L+E D I ++ QV+
Sbjct: 62 IERKLRESIPD-ILEVEQVF 80
>gi|428216612|ref|YP_007101077.1| nitrogen-fixing NifU domain-containing protein [Pseudanabaena sp.
PCC 7367]
gi|427988394|gb|AFY68649.1| nitrogen-fixing NifU domain-containing protein [Pseudanabaena sp.
PCC 7367]
Length = 78
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 60/76 (78%), Gaps = 1/76 (1%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
+LT NV+ VL+++RPYL+ADGGN+++V VE +V ++LQGACGSCPSS T+ MGIER
Sbjct: 4 ELTMDNVENVLDELRPYLLADGGNVELVEVEGPIVRLRLQGACGSCPSSAMTLRMGIERK 63
Query: 136 LKEKFGDAIKDIRQVY 151
L+E+ D I ++ QV+
Sbjct: 64 LREEIPD-IGEVEQVF 78
>gi|16332125|ref|NP_442853.1| NifU protein [Synechocystis sp. PCC 6803]
gi|383323868|ref|YP_005384722.1| NifU protein [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383327037|ref|YP_005387891.1| NifU protein [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383492921|ref|YP_005410598.1| NifU protein [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384438189|ref|YP_005652914.1| NifU protein [Synechocystis sp. PCC 6803]
gi|451816277|ref|YP_007452729.1| NifU protein [Synechocystis sp. PCC 6803]
gi|1653754|dbj|BAA18665.1| NifU protein [Synechocystis sp. PCC 6803]
gi|339275222|dbj|BAK51709.1| NifU protein [Synechocystis sp. PCC 6803]
gi|359273188|dbj|BAL30707.1| NifU protein [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359276358|dbj|BAL33876.1| NifU protein [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359279528|dbj|BAL37045.1| NifU protein [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407960233|dbj|BAM53473.1| NifU protein [Synechocystis sp. PCC 6803]
gi|451782246|gb|AGF53215.1| NifU protein [Synechocystis sp. PCC 6803]
Length = 76
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
+LT NV+ VL+++RPYL+ADGGN++VV ++ +V V+LQGACGSCPSST T+ MGIER
Sbjct: 1 MELTLNNVETVLDELRPYLMADGGNVEVVELDGPIVKVRLQGACGSCPSSTMTLKMGIER 60
Query: 135 VLKEKFGDAIKDIRQVY 151
L+E + I ++ QV
Sbjct: 61 KLREMIPE-IAEVEQVL 76
>gi|323453984|gb|EGB09855.1| hypothetical protein AURANDRAFT_6483, partial [Aureococcus
anophagefferens]
Length = 114
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Query: 73 HQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGI 132
QF LT +NV+L+L+++RPYL++DGGN+ + +E VV ++L+GACG+CPSST TM MG+
Sbjct: 1 EQFPLTWENVELILDELRPYLMSDGGNVRIAGIEGPVVKLELEGACGTCPSSTMTMKMGL 60
Query: 133 ERVLKEKFGDAIKDIRQ 149
ER LKE + I D+ Q
Sbjct: 61 ERRLKEAIPE-ISDVVQ 76
>gi|443327268|ref|ZP_21055897.1| thioredoxin-like protein [Xenococcus sp. PCC 7305]
gi|442793136|gb|ELS02594.1| thioredoxin-like protein [Xenococcus sp. PCC 7305]
Length = 78
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT NV+ VL+++RPYL++DGGN+D+V +E +V +KLQGACGSCPSS T+ MGIER L
Sbjct: 5 LTTDNVETVLDELRPYLMSDGGNVDLVEIEGPIVKLKLQGACGSCPSSAMTLKMGIERRL 64
Query: 137 KEKFGDAIKDIRQVY 151
+EK + I ++ QV
Sbjct: 65 REKIPE-IVEVEQVM 78
>gi|428312577|ref|YP_007123554.1| thioredoxin-like protein [Microcoleus sp. PCC 7113]
gi|428254189|gb|AFZ20148.1| thioredoxin-like protein [Microcoleus sp. PCC 7113]
Length = 80
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NV+ VL+D+RPYL+ADGGN+++V ++ +V ++LQGACGSCPSST T+ MGIER L
Sbjct: 7 LTPENVETVLDDLRPYLMADGGNVELVELDGPIVRLRLQGACGSCPSSTMTLRMGIERRL 66
Query: 137 KEKFGDAIKDIRQVY 151
+E F I ++ QV
Sbjct: 67 RE-FIPEIAEVEQVM 80
>gi|116783204|gb|ABK22836.1| unknown [Picea sitchensis]
Length = 248
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Query: 71 SAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSM 130
S LT +NV++VL++VRPYL++DGGN+++ ++ VV +KLQGACGSCPSS TM M
Sbjct: 92 STEGLALTEENVEMVLDEVRPYLMSDGGNVELYDIDGLVVKLKLQGACGSCPSSLMTMKM 151
Query: 131 GIERVLKEKFGDAIKDIRQVYDEE 154
GIER L E+ + + + QV D E
Sbjct: 152 GIERRLMEQIPEIVA-VEQVMDGE 174
Score = 42.4 bits (98), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLIA-DGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+L +NV+ VL ++RPYL+ GG +++V +E+ +V V++ G + T+ + +
Sbjct: 177 LELNEENVEKVLAEIRPYLVGTGGGELELVEIEEPIVKVRIGGPA----AGVMTVRVAVT 232
Query: 134 RVLKEKF 140
+ L+EK
Sbjct: 233 QKLREKI 239
>gi|223993177|ref|XP_002286272.1| nifU like protein [Thalassiosira pseudonana CCMP1335]
gi|220977587|gb|EED95913.1| nifU like protein [Thalassiosira pseudonana CCMP1335]
Length = 237
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 79/134 (58%), Gaps = 11/134 (8%)
Query: 17 TISSKSQFPTKFNERLQFISIKPKNSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFD 76
++S++ P +L+ + P ++ S E A+ S + P D
Sbjct: 31 SLSTRRHSPFSTRPQLRMTIVSPFDNTEDSDESGEGVATATYTSLGSDDEP-------LD 83
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NVD+VLE++RP+L+ DGGN+ + ++ +V ++LQGACG+CPSST TM MG+ER L
Sbjct: 84 LTWENVDMVLEEMRPFLLQDGGNVAISEIDGPIVKLELQGACGTCPSSTQTMKMGLERKL 143
Query: 137 KEKFGDAIKDIRQV 150
+E+ I +I++V
Sbjct: 144 RER----IPEIQEV 153
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSV--EDGV---VSVKLQGACGSCPSSTTTMSM 130
DL +++VL+ VRP+L GG IDV S+ E G+ +++K+ G+ S S ++
Sbjct: 162 DLNEDQINIVLDSVRPFLQVAGGTIDVASITGEGGLQPTITLKMGGSAASLNSVKLEIAQ 221
Query: 131 GIER 134
++R
Sbjct: 222 RLQR 225
>gi|282898150|ref|ZP_06306143.1| Nitrogen-fixing NifU-like protein [Raphidiopsis brookii D9]
gi|281196974|gb|EFA71877.1| Nitrogen-fixing NifU-like protein [Raphidiopsis brookii D9]
Length = 76
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
+LT +NV+ VL+++RPYL++DGGN++VV ++ +V ++LQGACGSCPSST T+ MGIER
Sbjct: 1 MELTLENVETVLDEMRPYLMSDGGNVEVVELDGPIVKLRLQGACGSCPSSTMTLRMGIER 60
Query: 135 VLKEKFGDAIKDIRQVY 151
LKE + I ++ QV+
Sbjct: 61 RLKEMIPE-IGEVEQVF 76
>gi|414076676|ref|YP_006995994.1| NifU domain-containing protein [Anabaena sp. 90]
gi|413970092|gb|AFW94181.1| NifU domain-containing protein [Anabaena sp. 90]
Length = 76
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 60/76 (78%), Gaps = 1/76 (1%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
+LT +NV+ VL+++RPYLI+DGGN+++V ++ +V ++LQGACGSCPSST T+ MGIER
Sbjct: 1 MELTLENVETVLDEMRPYLISDGGNVEIVELDGPIVKLRLQGACGSCPSSTMTLRMGIER 60
Query: 135 VLKEKFGDAIKDIRQV 150
LKE + I +I Q+
Sbjct: 61 RLKEMIPE-ISEIEQI 75
>gi|148238937|ref|YP_001224324.1| NifU-like protein [Synechococcus sp. WH 7803]
gi|147847476|emb|CAK23027.1| NifU-like protein [Synechococcus sp. WH 7803]
Length = 81
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 62/81 (76%), Gaps = 4/81 (4%)
Query: 70 YSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMS 129
S+ LT++NV+ VL+++RP+L+ADGGN++VV ++ VV V+LQGACGSCPSST T+
Sbjct: 1 MSSETMPLTSENVEKVLDELRPFLMADGGNVEVVEIDGPVVKVRLQGACGSCPSSTMTLK 60
Query: 130 MGIERVLKEKFGDAIKDIRQV 150
MGIER ++E AI ++ +V
Sbjct: 61 MGIERKMRE----AIPEVSEV 77
>gi|428224320|ref|YP_007108417.1| nitrogen-fixing NifU domain-containing protein [Geitlerinema sp.
PCC 7407]
gi|427984221|gb|AFY65365.1| nitrogen-fixing NifU domain protein [Geitlerinema sp. PCC 7407]
Length = 80
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 59/80 (73%), Gaps = 1/80 (1%)
Query: 72 AHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMG 131
A +LT +NV+ VL+D+RPYL+ADGGN+++ +E +V ++LQGACGSCPSS T+ MG
Sbjct: 2 AEVMELTPENVEKVLDDLRPYLMADGGNVELADIEGPIVKLRLQGACGSCPSSAMTLKMG 61
Query: 132 IERVLKEKFGDAIKDIRQVY 151
IER L+E + I ++ QV
Sbjct: 62 IERRLREMIPE-IAEVEQVL 80
>gi|126660171|ref|ZP_01731289.1| putative NifU-like protein [Cyanothece sp. CCY0110]
gi|126618536|gb|EAZ89287.1| putative NifU-like protein [Cyanothece sp. CCY0110]
Length = 80
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT NV+ VL+++RPYL+ADGGN+++V +E +V ++LQGACGSCPSST T+ MGIER L
Sbjct: 7 LTPDNVETVLDEMRPYLMADGGNVELVEIEGPIVKLRLQGACGSCPSSTMTLKMGIERRL 66
Query: 137 KEKFGDAIKDIRQVY 151
+E + I ++ Q +
Sbjct: 67 REMIPE-IAEVEQAF 80
>gi|425463273|ref|ZP_18842625.1| NifU-like protein [Microcystis aeruginosa PCC 9808]
gi|389823394|emb|CCI28440.1| NifU-like protein [Microcystis aeruginosa PCC 9808]
Length = 78
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT NV+ VL+++RPYL+ADGGN+++V ++ VV ++LQGACGSCPSST T+ MGIER L
Sbjct: 5 LTPNNVEQVLDEMRPYLMADGGNVELVEIDGPVVKLRLQGACGSCPSSTMTLKMGIERRL 64
Query: 137 KEKFGDAIKDIRQVY 151
+E D I ++ Q +
Sbjct: 65 REMIPD-IAEVEQAF 78
>gi|411119169|ref|ZP_11391549.1| thioredoxin-like protein [Oscillatoriales cyanobacterium JSC-12]
gi|410711032|gb|EKQ68539.1| thioredoxin-like protein [Oscillatoriales cyanobacterium JSC-12]
Length = 80
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Query: 72 AHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMG 131
+ LT +NV+ VL+++RPYL+ADGGN+++V ++ +V ++LQGACGSCPSST T+ MG
Sbjct: 2 SQALTLTPENVETVLDEMRPYLMADGGNVELVEIDGPIVKLRLQGACGSCPSSTMTLRMG 61
Query: 132 IERVLKEKFGDAIKDIRQV 150
IER L+E F I ++ QV
Sbjct: 62 IERRLRE-FIPEIAEVEQV 79
>gi|88809237|ref|ZP_01124746.1| NifU-like protein [Synechococcus sp. WH 7805]
gi|88787179|gb|EAR18337.1| NifU-like protein [Synechococcus sp. WH 7805]
Length = 81
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 62/82 (75%), Gaps = 1/82 (1%)
Query: 70 YSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMS 129
S+ LT++NV+ VL+++RP+L+ADGGN++VV ++ VV V+LQGACGSCPSST T+
Sbjct: 1 MSSETLPLTSENVEKVLDELRPFLMADGGNVEVVEIDGPVVKVRLQGACGSCPSSTMTLK 60
Query: 130 MGIERVLKEKFGDAIKDIRQVY 151
MGIER ++E + + ++ QV
Sbjct: 61 MGIERKMRETIPE-VSEVVQVL 81
>gi|116073290|ref|ZP_01470552.1| NifU-like protein [Synechococcus sp. RS9916]
gi|116068595|gb|EAU74347.1| NifU-like protein [Synechococcus sp. RS9916]
Length = 81
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 61/82 (74%), Gaps = 4/82 (4%)
Query: 70 YSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMS 129
S LT++NV+ VL+++RP+L+ADGGN++VV ++ VV V+LQGACGSCPSST T+
Sbjct: 1 MSTETLPLTSENVEKVLDELRPFLMADGGNVEVVEIDGPVVKVRLQGACGSCPSSTMTLK 60
Query: 130 MGIERVLKEKFGDAIKDIRQVY 151
MGIER ++E AI ++ +V
Sbjct: 61 MGIERKMRE----AIPEVSEVV 78
>gi|284929666|ref|YP_003422188.1| thioredoxin-like protein [cyanobacterium UCYN-A]
gi|284810110|gb|ADB95807.1| thioredoxin-like protein [cyanobacterium UCYN-A]
Length = 76
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT NV+ VL+++RPYLIADGGN+++V ++ +V ++LQGACGSCPSST T+ MGIER L
Sbjct: 3 LTPTNVEQVLDELRPYLIADGGNVELVEIDGAIVKLRLQGACGSCPSSTMTLKMGIERRL 62
Query: 137 KEKFGDAIKDIRQVY 151
KE + + ++ Q +
Sbjct: 63 KEMIPE-VSEVEQAF 76
>gi|8777425|dbj|BAA97015.1| unnamed protein product [Arabidopsis thaliana]
Length = 684
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NV+ VL+++RPYL++DGGN+ + ++ +V VKLQGACGSCPSST TM MGIER L
Sbjct: 85 LTEENVESVLDEIRPYLMSDGGNVALHEIDGNIVRVKLQGACGSCPSSTMTMKMGIERRL 144
Query: 137 KEKFGDAIKDIRQVYDEE 154
EK + + + + DEE
Sbjct: 145 MEKIPEIVA-VEALPDEE 161
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADG-GNIDVVSVEDGVVSVKLQG 116
+L +N++ VLE++RPYLI G++D+V +ED +V +++ G
Sbjct: 164 LELNEENIEKVLEEIRPYLIGTADGSLDLVEIEDPIVKIRITG 206
>gi|145334787|ref|NP_001078739.1| NifU-like protein 2 [Arabidopsis thaliana]
gi|222422967|dbj|BAH19468.1| AT5G49940 [Arabidopsis thaliana]
gi|332008491|gb|AED95874.1| NifU-like protein 2 [Arabidopsis thaliana]
Length = 185
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
Query: 74 QFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+ LT +NV+ VL+++RPYL++DGGN+ + ++ +V VKLQGACGSCPSST TM MGIE
Sbjct: 82 EVPLTEENVESVLDEIRPYLMSDGGNVALHEIDGNIVRVKLQGACGSCPSSTMTMKMGIE 141
Query: 134 RVLKEKFGDAIKDIRQVYDEE 154
R L EK + + + + DEE
Sbjct: 142 RRLMEKIPEIVA-VEALPDEE 161
>gi|282900620|ref|ZP_06308562.1| Nitrogen-fixing NifU-like protein [Cylindrospermopsis raciborskii
CS-505]
gi|281194420|gb|EFA69375.1| Nitrogen-fixing NifU-like protein [Cylindrospermopsis raciborskii
CS-505]
Length = 76
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 60/76 (78%), Gaps = 1/76 (1%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
+LT +NV+ VL+++RPYLI+DGGN++VV ++ +V ++LQGACGSCPSST T+ MGIER
Sbjct: 1 MELTLENVETVLDEMRPYLISDGGNVEVVELDGPIVKLRLQGACGSCPSSTMTLRMGIER 60
Query: 135 VLKEKFGDAIKDIRQV 150
LKE + I ++ QV
Sbjct: 61 RLKEMIPE-IGEVEQV 75
>gi|172035933|ref|YP_001802434.1| NifU-like protein [Cyanothece sp. ATCC 51142]
gi|354556021|ref|ZP_08975319.1| nitrogen-fixing NifU domain-containing protein [Cyanothece sp. ATCC
51472]
gi|171697387|gb|ACB50368.1| NifU-like protein [Cyanothece sp. ATCC 51142]
gi|353552020|gb|EHC21418.1| nitrogen-fixing NifU domain-containing protein [Cyanothece sp. ATCC
51472]
Length = 80
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT NV+ VL+++RPYL+ADGGN+++V +E +V ++LQGACGSCPSST T+ MGIER L
Sbjct: 7 LTPDNVEQVLDEMRPYLMADGGNVELVEIEGPIVKLRLQGACGSCPSSTMTLKMGIERRL 66
Query: 137 KEKFGDAIKDIRQVY 151
+E + I ++ Q +
Sbjct: 67 REMIPE-IAEVEQAF 80
>gi|220907447|ref|YP_002482758.1| nitrogen-fixing NifU domain-containing protein [Cyanothece sp. PCC
7425]
gi|219864058|gb|ACL44397.1| nitrogen-fixing NifU domain protein [Cyanothece sp. PCC 7425]
Length = 76
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
+LT NV+ VL+++RPYL+ADGGN+++V +E +V ++LQGACGSCPSST T+ MGIER
Sbjct: 1 MELTTDNVEKVLDELRPYLMADGGNVELVELEGPIVRLRLQGACGSCPSSTMTLRMGIER 60
Query: 135 VLKEKFGDAIKDIRQVY 151
L+E + I ++ QV
Sbjct: 61 KLRESIPE-IAEVEQVL 76
>gi|427702706|ref|YP_007045928.1| thioredoxin-like protein [Cyanobium gracile PCC 6307]
gi|427345874|gb|AFY28587.1| thioredoxin-like protein [Cyanobium gracile PCC 6307]
Length = 95
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 59/74 (79%), Gaps = 4/74 (5%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NV+ VL+++RPYL+ADGGN+++V ++ VV V+LQGACGSCPSST T+ MGIER L
Sbjct: 22 LTIENVERVLDELRPYLMADGGNVEIVEIDGPVVKVRLQGACGSCPSSTMTLKMGIERKL 81
Query: 137 KEKFGDAIKDIRQV 150
+E AI ++ +V
Sbjct: 82 RE----AIPEVSEV 91
>gi|18423084|ref|NP_568715.1| NifU-like protein 2 [Arabidopsis thaliana]
gi|75163219|sp|Q93W20.1|NIFU2_ARATH RecName: Full=NifU-like protein 2, chloroplastic; Short=AtCNfu2;
Short=AtCnfU-V; Flags: Precursor
gi|13878181|gb|AAK44168.1|AF370353_1 unknown protein [Arabidopsis thaliana]
gi|16226434|gb|AAL16167.1|AF428399_1 AT5g49940/K9P8_8 [Arabidopsis thaliana]
gi|17104539|gb|AAL34158.1| unknown protein [Arabidopsis thaliana]
gi|26452324|dbj|BAC43248.1| unknown protein [Arabidopsis thaliana]
gi|28207818|emb|CAD55559.1| NFU2 protein [Arabidopsis thaliana]
gi|332008490|gb|AED95873.1| NifU-like protein 2 [Arabidopsis thaliana]
Length = 235
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
Query: 74 QFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+ LT +NV+ VL+++RPYL++DGGN+ + ++ +V VKLQGACGSCPSST TM MGIE
Sbjct: 82 EVPLTEENVESVLDEIRPYLMSDGGNVALHEIDGNIVRVKLQGACGSCPSSTMTMKMGIE 141
Query: 134 RVLKEKFGDAIKDIRQVYDEE 154
R L EK + + + + DEE
Sbjct: 142 RRLMEKIPEIVA-VEALPDEE 161
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADG-GNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+L +N++ VLE++RPYLI G++D+V +ED +V +++ G + T+ + +
Sbjct: 164 LELNEENIEKVLEEIRPYLIGTADGSLDLVEIEDPIVKIRITGPA----AGVMTVRVAVT 219
Query: 134 RVLKEKF 140
+ L+EK
Sbjct: 220 QKLREKI 226
>gi|428210559|ref|YP_007083703.1| thioredoxin-like protein [Oscillatoria acuminata PCC 6304]
gi|427998940|gb|AFY79783.1| thioredoxin-like protein [Oscillatoria acuminata PCC 6304]
Length = 80
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
LT++NV+ VL+++RPYL+ADGGN+++V +E +V ++LQGACGSCPSS T+ MGIER
Sbjct: 5 LALTSENVETVLDELRPYLMADGGNVELVELEGPIVKLRLQGACGSCPSSAMTLRMGIER 64
Query: 135 VLKEKFGDAIKDIRQVY 151
L+E + I ++ QV
Sbjct: 65 KLRESIPE-IAEVEQVL 80
>gi|254415273|ref|ZP_05029035.1| hypothetical protein MC7420_2699 [Coleofasciculus chthonoplastes
PCC 7420]
gi|196178079|gb|EDX73081.1| hypothetical protein MC7420_2699 [Coleofasciculus chthonoplastes
PCC 7420]
Length = 84
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT++NV+ VL+++RPYL+ADGGN+D+V ++ +V ++LQGACGSCPSS T+ MGIER L
Sbjct: 11 LTSENVEAVLDELRPYLMADGGNVDLVEIDGPIVKLRLQGACGSCPSSAMTLKMGIERRL 70
Query: 137 KEKFGDAIKDIRQV 150
+E F I ++ QV
Sbjct: 71 RE-FIPEIVEVEQV 83
>gi|158334696|ref|YP_001515868.1| NifU domain-containing protein [Acaryochloris marina MBIC11017]
gi|359463262|ref|ZP_09251825.1| NifU domain-containing protein [Acaryochloris sp. CCMEE 5410]
gi|158304937|gb|ABW26554.1| NifU domain protein [Acaryochloris marina MBIC11017]
Length = 80
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
Query: 72 AHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMG 131
+ +L +NV+ VL+++RPYL+ADGGN+++V VE VV ++LQGACGSCPSS T+ MG
Sbjct: 2 SQTLELNPENVETVLDELRPYLMADGGNVELVEVEGPVVKLRLQGACGSCPSSAMTLKMG 61
Query: 132 IERVLKEKFGDAIKDIRQVY 151
IER L++ + I ++ QV+
Sbjct: 62 IERKLRDTIPE-IAEVEQVF 80
>gi|409993648|ref|ZP_11276782.1| nitrogen-fixing NifU domain-containing protein [Arthrospira
platensis str. Paraca]
gi|291566311|dbj|BAI88583.1| iron-sulfur cluster assembly factor [Arthrospira platensis NIES-39]
gi|409935493|gb|EKN77023.1| nitrogen-fixing NifU domain-containing protein [Arthrospira
platensis str. Paraca]
Length = 79
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 54/64 (84%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NV+ VL+++RPYL+ADGGN+++V ++ +V ++LQGACGSCPSST T+ MGIER L
Sbjct: 6 LTPENVETVLDELRPYLMADGGNVEIVELDGPIVRLRLQGACGSCPSSTMTLKMGIERRL 65
Query: 137 KEKF 140
+EK
Sbjct: 66 REKI 69
>gi|354567091|ref|ZP_08986261.1| nitrogen-fixing NifU domain-containing protein [Fischerella sp.
JSC-11]
gi|353543392|gb|EHC12850.1| nitrogen-fixing NifU domain-containing protein [Fischerella sp.
JSC-11]
Length = 76
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 60/76 (78%), Gaps = 1/76 (1%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
+LTA NV+ VL+++RPYL++DGGN+++V ++ +V ++LQGACGSCPSST T+ MGIER
Sbjct: 1 MELTADNVETVLDEMRPYLMSDGGNVELVELDGPIVKLRLQGACGSCPSSTMTLRMGIER 60
Query: 135 VLKEKFGDAIKDIRQV 150
LKE + I ++ QV
Sbjct: 61 RLKEMIPE-IAEVEQV 75
>gi|56751077|ref|YP_171778.1| NifU-like protein [Synechococcus elongatus PCC 6301]
gi|81299261|ref|YP_399469.1| NifU-like protein [Synechococcus elongatus PCC 7942]
gi|24414813|emb|CAD55626.1| putative NifU-like protein [Synechococcus elongatus PCC 7942]
gi|56686036|dbj|BAD79258.1| putative NifU-like protein [Synechococcus elongatus PCC 6301]
gi|81168142|gb|ABB56482.1| putative NifU-like protein [Synechococcus elongatus PCC 7942]
Length = 81
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Query: 70 YSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMS 129
+ LT +NV+ VL+++RPYLIADGGN+++V ++ +V ++L GACGSCPSST T+
Sbjct: 1 MATETLALTPENVETVLDELRPYLIADGGNVELVELDGPIVKLRLNGACGSCPSSTMTLR 60
Query: 130 MGIERVLKEKFGDAIKDIRQVY 151
MGIER L+E + I ++ QV+
Sbjct: 61 MGIERKLRESIPE-ISEVEQVF 81
>gi|33862527|ref|NP_894087.1| NifU-like protein [Prochlorococcus marinus str. MIT 9313]
gi|124023791|ref|YP_001018098.1| NifU-like protein [Prochlorococcus marinus str. MIT 9303]
gi|33640640|emb|CAE20429.1| NifU-like protein [Prochlorococcus marinus str. MIT 9313]
gi|123964077|gb|ABM78833.1| NifU-like protein [Prochlorococcus marinus str. MIT 9303]
Length = 81
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Query: 70 YSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMS 129
S LT +NV+ VL+++RP+L+ADGGN+++V ++ VV V+LQGACGSCPSST T+
Sbjct: 1 MSTEAMALTNENVETVLDELRPFLMADGGNVEIVEIDGPVVKVRLQGACGSCPSSTMTLK 60
Query: 130 MGIERVLKEKFGDAIKDIRQVY 151
MGIER L+E + + ++ QV
Sbjct: 61 MGIERKLREMIPE-VSEVVQVL 81
>gi|119493943|ref|ZP_01624504.1| putative NifU-like protein [Lyngbya sp. PCC 8106]
gi|119452300|gb|EAW33495.1| putative NifU-like protein [Lyngbya sp. PCC 8106]
Length = 79
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 54/64 (84%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NV+ VL+++RPYL+ADGGN+++V ++ +V ++LQGACGSCPSST T+ MGIER L
Sbjct: 6 LTPENVETVLDELRPYLMADGGNVEIVELDGPIVRLRLQGACGSCPSSTMTLKMGIERRL 65
Query: 137 KEKF 140
+EK
Sbjct: 66 REKI 69
>gi|145351003|ref|XP_001419878.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580111|gb|ABO98171.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 213
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
+LTA N++ VL++VRPYLIADGG++++V ++ V +KL+GACGSCPSST TM MGIE+
Sbjct: 60 LELTADNIESVLDEVRPYLIADGGDVELVEIDGLSVKLKLKGACGSCPSSTVTMRMGIEK 119
Query: 135 VLKEKFGDAIKDIRQVYD 152
L EK D I ++ QV +
Sbjct: 120 RLLEKIPD-IMEVIQVEE 136
Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLIA-DGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
DL +NV+ L+++RPYL GG ++++ +E+ +V V+L G + T+ + +
Sbjct: 141 LDLNEENVEATLDEIRPYLAGTGGGELELIDIEEPIVKVRLTGPA----AKVMTVRVAVT 196
Query: 134 RVLKEKF 140
+ L+EK
Sbjct: 197 QKLREKI 203
>gi|87303149|ref|ZP_01085947.1| NifU-like protein [Synechococcus sp. WH 5701]
gi|87282316|gb|EAQ74276.1| NifU-like protein [Synechococcus sp. WH 5701]
Length = 97
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 58/74 (78%), Gaps = 4/74 (5%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NV+ VL+++RPYL+ADGGN+++V ++ V V+LQGACGSCPSST T+ MGIER L
Sbjct: 24 LTVENVERVLDELRPYLMADGGNVEIVEIDGPTVKVRLQGACGSCPSSTMTLKMGIERKL 83
Query: 137 KEKFGDAIKDIRQV 150
+E AI ++ +V
Sbjct: 84 RE----AIPEVNEV 93
>gi|87125583|ref|ZP_01081428.1| NifU-like protein [Synechococcus sp. RS9917]
gi|86166883|gb|EAQ68145.1| NifU-like protein [Synechococcus sp. RS9917]
Length = 81
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
Query: 70 YSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMS 129
S L+++NV+ VL+++RP+L+ADGGN++VV ++ VV V+LQGACGSCPSST T+
Sbjct: 1 MSTETLPLSSENVEKVLDELRPFLMADGGNVEVVEIDGPVVKVRLQGACGSCPSSTMTLK 60
Query: 130 MGIERVLKEKFGDAIKDIRQVY 151
MGIER L+E + + ++ QV
Sbjct: 61 MGIERKLREMIPE-VSEVVQVL 81
>gi|209523451|ref|ZP_03272006.1| nitrogen-fixing NifU domain protein [Arthrospira maxima CS-328]
gi|376006464|ref|ZP_09783734.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
gi|423064651|ref|ZP_17053441.1| nitrogen-fixing NifU domain protein [Arthrospira platensis C1]
gi|209496193|gb|EDZ96493.1| nitrogen-fixing NifU domain protein [Arthrospira maxima CS-328]
gi|375325168|emb|CCE19487.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
gi|406713894|gb|EKD09062.1| nitrogen-fixing NifU domain protein [Arthrospira platensis C1]
Length = 79
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 54/64 (84%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NV+ VL+++RPYL+ADGGN++VV ++ +V ++LQGACGSCPSST T+ MGIER L
Sbjct: 6 LTPENVETVLDELRPYLMADGGNVEVVELDGPIVRLRLQGACGSCPSSTMTLKMGIERRL 65
Query: 137 KEKF 140
+E+
Sbjct: 66 RERI 69
>gi|218245975|ref|YP_002371346.1| nitrogen-fixing NifU domain-containing protein [Cyanothece sp. PCC
8801]
gi|257059024|ref|YP_003136912.1| nitrogen-fixing NifU domain-containing protein [Cyanothece sp. PCC
8802]
gi|218166453|gb|ACK65190.1| nitrogen-fixing NifU domain protein [Cyanothece sp. PCC 8801]
gi|256589190|gb|ACV00077.1| nitrogen-fixing NifU domain protein [Cyanothece sp. PCC 8802]
Length = 79
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
+LT NV+ VL+++RPYL+ADGGN+++V ++ VV ++LQGACGSCPSST T+ MGIER
Sbjct: 4 MELTPDNVETVLDEMRPYLMADGGNVELVELDGPVVKLRLQGACGSCPSSTMTLRMGIER 63
Query: 135 VLKEKFGDAIKDIRQVY 151
L+E + I ++ QV
Sbjct: 64 RLREMIPE-IAEVEQVL 79
>gi|33860975|ref|NP_892536.1| NifU-like protein [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
gi|33639707|emb|CAE18877.1| NifU-like protein [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 81
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Query: 70 YSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMS 129
S LT +NV+ VL+++RP+LI+DGGN+++ ++ +V V+LQGACGSCPSST T+
Sbjct: 1 MSTETLPLTNENVETVLDELRPFLISDGGNVEIAEIDGPIVKVRLQGACGSCPSSTMTLK 60
Query: 130 MGIERVLKEKFGDAIKDIRQVY 151
MGIER LKE + I ++ QV
Sbjct: 61 MGIERKLKEMIPE-ISEVVQVL 81
>gi|303290897|ref|XP_003064735.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453761|gb|EEH51069.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 153
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 53/64 (82%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
+LTA+NV+ VL++VRPYLIADGG++++V ++ VV +KL GACGSCPSST TM MGIER
Sbjct: 1 LELTAENVEKVLDEVRPYLIADGGDVELVEIDGLVVRLKLNGACGSCPSSTVTMRMGIER 60
Query: 135 VLKE 138
L E
Sbjct: 61 RLLE 64
Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLIA-DGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+L NV+ L+++RPYL GG +++V +E+ +V +KL G +S T+ + +
Sbjct: 82 LELNEANVEATLDEIRPYLKGTGGGELELVDIEEPIVKIKLSGPA----ASVMTVRVAVT 137
Query: 134 RVLKEKF 140
+ L+EK
Sbjct: 138 QKLREKM 144
>gi|357160726|ref|XP_003578857.1| PREDICTED: nifU-like protein 2, chloroplastic-like [Brachypodium
distachyon]
Length = 242
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LTA+NV+LVL++VRPYLIADGGN+ ++ VV +KLQGACGSCP S TM MGI+R L
Sbjct: 91 LTAENVELVLDEVRPYLIADGGNVAFHEIDGNVVRLKLQGACGSCPGSVMTMRMGIQRRL 150
Query: 137 KEKFGDAIKDIRQVYDEE 154
+K I + + D+E
Sbjct: 151 MDKI-PQIVAVEAITDKE 167
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 75 FDLTAKNVDLVLEDVRPYLI-ADGGNIDVVSVEDGVVSVKLQG 116
L +NV+ VLE++RPYL A GG + V+VE V+L G
Sbjct: 170 LKLNEENVEKVLEEIRPYLAGAGGGKLKFVAVERPFAKVQLTG 212
>gi|218438992|ref|YP_002377321.1| nitrogen-fixing NifU domain-containing protein [Cyanothece sp. PCC
7424]
gi|218171720|gb|ACK70453.1| nitrogen-fixing NifU domain protein [Cyanothece sp. PCC 7424]
Length = 81
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 60/81 (74%), Gaps = 1/81 (1%)
Query: 71 SAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSM 130
+ LT +NV+ VL+++RPYL+ADGGN+++V ++ +V ++LQGACGSCPSST T+ M
Sbjct: 2 ATETLPLTTENVEQVLDELRPYLMADGGNVELVEIDGPIVKLRLQGACGSCPSSTMTLKM 61
Query: 131 GIERVLKEKFGDAIKDIRQVY 151
GIER L+E + I ++ Q +
Sbjct: 62 GIERRLREYIPE-IAEVEQTF 81
>gi|427708116|ref|YP_007050493.1| nitrogen-fixing NifU domain-containing protein [Nostoc sp. PCC
7107]
gi|427360621|gb|AFY43343.1| nitrogen-fixing NifU domain-containing protein [Nostoc sp. PCC
7107]
Length = 76
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 59/76 (77%), Gaps = 1/76 (1%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
+LT NV+ VL+++RPYLI+DGGN++VV ++ VV ++LQGACGSCPSST T+ MGIER
Sbjct: 1 MELTLDNVETVLDEMRPYLISDGGNVEVVELDGPVVRLRLQGACGSCPSSTMTLRMGIER 60
Query: 135 VLKEKFGDAIKDIRQV 150
L+E + I ++ QV
Sbjct: 61 RLREMIPE-IAEVEQV 75
>gi|219120702|ref|XP_002181084.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407800|gb|EEC47736.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 225
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 64/92 (69%), Gaps = 1/92 (1%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
DLT NV+ VL+++RPYLI DGGN+ + ++ VV ++LQGACG+CPSST TM MG+ER
Sbjct: 69 LDLTWDNVEAVLDEMRPYLIQDGGNVIISDIDGPVVKLELQGACGTCPSSTQTMKMGLER 128
Query: 135 VLKEKFGDAIKDIRQVYDEEVRETTVEVSALL 166
L+EK + I+++ Q E T+ +V +L
Sbjct: 129 GLREKIPE-IQEVIQAMPEGPELTSEQVDVVL 159
>gi|194476553|ref|YP_002048732.1| NifU-like protein [Paulinella chromatophora]
gi|171191560|gb|ACB42522.1| NifU-like protein [Paulinella chromatophora]
Length = 81
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 58/82 (70%), Gaps = 4/82 (4%)
Query: 70 YSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMS 129
+ LT +NV+ VL ++RP+LIADGGN++V ++ VV V+LQGACGSCPSST T+
Sbjct: 1 MNTENLALTLENVETVLNELRPFLIADGGNVEVAEIDGPVVKVRLQGACGSCPSSTMTLK 60
Query: 130 MGIERVLKEKFGDAIKDIRQVY 151
MGIER L+E AI ++ +V
Sbjct: 61 MGIERKLRE----AIPEVSEVI 78
>gi|302792717|ref|XP_002978124.1| hypothetical protein SELMODRAFT_108525 [Selaginella moellendorffii]
gi|300154145|gb|EFJ20781.1| hypothetical protein SELMODRAFT_108525 [Selaginella moellendorffii]
Length = 185
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
LT +NV++VL++VRPYL++DGGN+ + ++ VV +KLQGACGSCPSS TM MGIE
Sbjct: 33 LALTEENVEMVLDEVRPYLMSDGGNVALEEIDGLVVKLKLQGACGSCPSSLMTMKMGIEA 92
Query: 135 VLKEKFGDAIKDIRQVYDEE 154
LKEK + I + QV D E
Sbjct: 93 RLKEKIPEII-GVEQVQDTE 111
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLIA-DGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+LT +NVD +L ++RPYL+ GG + +V ++ VV ++++G + T+ + +
Sbjct: 114 LELTEENVDKILSEIRPYLVGTGGGELTLVKIDGPVVKIRIEGPA----AGVMTVRVAVT 169
Query: 134 RVLKEKF 140
+ L+EK
Sbjct: 170 QKLREKI 176
>gi|78778799|ref|YP_396911.1| NifU-like protein [Prochlorococcus marinus str. MIT 9312]
gi|123968006|ref|YP_001008864.1| NifU-like protein [Prochlorococcus marinus str. AS9601]
gi|126695776|ref|YP_001090662.1| NifU-like protein [Prochlorococcus marinus str. MIT 9301]
gi|157412831|ref|YP_001483697.1| NifU-like protein [Prochlorococcus marinus str. MIT 9215]
gi|254525524|ref|ZP_05137576.1| NifU domain protein [Prochlorococcus marinus str. MIT 9202]
gi|78712298|gb|ABB49475.1| NifU-like protein [Prochlorococcus marinus str. MIT 9312]
gi|91070321|gb|ABE11238.1| NifU-like protein [uncultured Prochlorococcus marinus clone
HF10-88F10]
gi|123198116|gb|ABM69757.1| NifU-like protein [Prochlorococcus marinus str. AS9601]
gi|126542819|gb|ABO17061.1| NifU-like protein [Prochlorococcus marinus str. MIT 9301]
gi|157387406|gb|ABV50111.1| NifU-like protein [Prochlorococcus marinus str. MIT 9215]
gi|221536948|gb|EEE39401.1| NifU domain protein [Prochlorococcus marinus str. MIT 9202]
Length = 81
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Query: 70 YSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMS 129
S LT +NV+ VL+++RP+LI+DGGN+++ ++ +V V+LQGACGSCPSST T+
Sbjct: 1 MSTETLSLTNENVEKVLDELRPFLISDGGNVEIAEIDGPIVKVRLQGACGSCPSSTMTLK 60
Query: 130 MGIERVLKEKFGDAIKDIRQVY 151
MGIER LKE + I ++ QV
Sbjct: 61 MGIERKLKEMIPE-ISEVVQVL 81
>gi|254422508|ref|ZP_05036226.1| hypothetical protein S7335_2660 [Synechococcus sp. PCC 7335]
gi|196189997|gb|EDX84961.1| hypothetical protein S7335_2660 [Synechococcus sp. PCC 7335]
Length = 79
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT NV+ VL+++RPYL+ADGGN+++V ++ +V ++LQGACGSCPSS T+ MGIER L
Sbjct: 6 LTKPNVEKVLDELRPYLMADGGNVELVELDGPIVKLRLQGACGSCPSSAMTLRMGIERRL 65
Query: 137 KEKFGDAIKDIRQVY 151
+E F I +I QV+
Sbjct: 66 RE-FIPEIAEIEQVF 79
>gi|113954347|ref|YP_729865.1| NifU domain-containing protein [Synechococcus sp. CC9311]
gi|113881698|gb|ABI46656.1| NifU domain protein [Synechococcus sp. CC9311]
Length = 81
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Query: 70 YSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMS 129
S LT +NV+ VL+++RP+L+ADGGN++VV ++ VV V+LQGACGSCPSST T+
Sbjct: 1 MSTETMALTNENVEKVLDELRPFLMADGGNVEVVEIDGPVVKVRLQGACGSCPSSTMTLK 60
Query: 130 MGIERVLKEKFGDAIKDIRQVY 151
MGIER ++E + + ++ QV
Sbjct: 61 MGIERKMRESIPE-VSEVVQVL 81
>gi|317967928|ref|ZP_07969318.1| NifU-like protein [Synechococcus sp. CB0205]
Length = 92
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 58/74 (78%), Gaps = 4/74 (5%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NV+ L+++RPYL+ADGGN++VV ++ +V V+LQGACGSCPSST T+ MGIER L
Sbjct: 19 LTIENVERTLDELRPYLMADGGNVEVVEIDGPIVKVRLQGACGSCPSSTMTLKMGIERKL 78
Query: 137 KEKFGDAIKDIRQV 150
+E AI ++ +V
Sbjct: 79 RE----AIPEVSEV 88
>gi|242082972|ref|XP_002441911.1| hypothetical protein SORBIDRAFT_08g004740 [Sorghum bicolor]
gi|241942604|gb|EES15749.1| hypothetical protein SORBIDRAFT_08g004740 [Sorghum bicolor]
Length = 227
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Query: 60 SAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACG 119
A A + GL + Q LT NV+ VL++VRPYLIADGG++ + + VV +KLQGACG
Sbjct: 59 GAVARAVAGLNTMVQLPLTTGNVESVLDEVRPYLIADGGDVALHEINGNVVRLKLQGACG 118
Query: 120 SCPSSTTTMSMGIERVLKEKFGDAIKDIRQVYDEEV 155
SCPSS TTM M I+R L E + I + +V D+E+
Sbjct: 119 SCPSSVTTMKMRIQRRLMENIPE-ISAVERVADKEM 153
>gi|123965714|ref|YP_001010795.1| NifU-like protein [Prochlorococcus marinus str. MIT 9515]
gi|123200080|gb|ABM71688.1| NifU-like protein [Prochlorococcus marinus str. MIT 9515]
Length = 81
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Query: 70 YSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMS 129
S LT +NV+ VL+++RP+LI+DGGN+++ ++ +V V+LQGACGSCPSST T+
Sbjct: 1 MSTETLPLTNENVEKVLDELRPFLISDGGNVEIAEIDGPIVKVRLQGACGSCPSSTMTLK 60
Query: 130 MGIERVLKEKFGDAIKDIRQVY 151
MGIER LKE + I ++ QV
Sbjct: 61 MGIERKLKEMIPE-ISEVVQVL 81
>gi|224129660|ref|XP_002328771.1| predicted protein [Populus trichocarpa]
gi|222839069|gb|EEE77420.1| predicted protein [Populus trichocarpa]
Length = 234
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Query: 71 SAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSM 130
SA + LTA NV+ VL++VRPYLI+DGGN+ + ++ VV +KLQGAC SC +S TTM M
Sbjct: 78 SAVELPLTADNVESVLDEVRPYLISDGGNVALHEIDGNVVRLKLQGACSSCSASVTTMKM 137
Query: 131 GIERVLKEKFGDAIKDIRQVYDEE 154
GIER L EK + I + + DEE
Sbjct: 138 GIERRLMEKIPE-IVAVEAISDEE 160
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 44/67 (65%), Gaps = 5/67 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLI-ADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+L +N++ VLE++RPYL+ A GG++++V++E+ +V +++ G + T+ + +
Sbjct: 163 LELKEENIEKVLEEIRPYLVGAAGGSLELVAIEEPIVKIRITGPA----AGVMTVRVAVT 218
Query: 134 RVLKEKF 140
+ L+EK
Sbjct: 219 QKLREKI 225
>gi|194319991|pdb|2Z51|A Chain A, Crystal Structure Of Arabidopsis Cnfu Involved In Iron-
Sulfur Cluster Biosynthesis
Length = 154
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NV+ VL+++RPYL++DGGN+ + ++ VV VKLQGACGSCPSST TM MGIER L
Sbjct: 4 LTEENVESVLDEIRPYLMSDGGNVALHEIDGNVVRVKLQGACGSCPSSTMTMKMGIERRL 63
Query: 137 KEKFGDAIKDIRQVYDEE 154
EK + + + + DEE
Sbjct: 64 MEKIPEIVA-VEALPDEE 80
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADG-GNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+L +N++ VLE++RPYLI G++D+V +ED +V +++ G + T+ + +
Sbjct: 83 LELNEENIEKVLEEIRPYLIGTADGSLDLVEIEDPIVKIRITGPA----AGVMTVRVAVT 138
Query: 134 RVLKEKF 140
+ L+EK
Sbjct: 139 QKLREKI 145
>gi|443321007|ref|ZP_21050076.1| thioredoxin-like protein [Gloeocapsa sp. PCC 73106]
gi|442789286|gb|ELR98950.1| thioredoxin-like protein [Gloeocapsa sp. PCC 73106]
Length = 79
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT NV+ VL+++RPYL+ADGGN+++V ++ +V ++LQGACGSCPSST T+ MGIER L
Sbjct: 6 LTPDNVEKVLDEMRPYLMADGGNVELVEIDGPIVRLRLQGACGSCPSSTMTLKMGIERRL 65
Query: 137 KEKFGDAIKDIRQVY 151
+E F I ++ Q +
Sbjct: 66 RE-FIPEIAEVEQAF 79
>gi|332707425|ref|ZP_08427474.1| thioredoxin-like protein [Moorea producens 3L]
gi|332353776|gb|EGJ33267.1| thioredoxin-like protein [Moorea producens 3L]
Length = 80
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 58/74 (78%), Gaps = 1/74 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NV+ VL+++RPYL+ADGGN+++V ++ V ++LQGACGSCPSST T+ MGIER L
Sbjct: 7 LTPENVETVLDEMRPYLMADGGNVELVELDGPTVKLRLQGACGSCPSSTMTLRMGIERRL 66
Query: 137 KEKFGDAIKDIRQV 150
KE F I ++ QV
Sbjct: 67 KE-FIPEILEVEQV 79
>gi|428179555|gb|EKX48426.1| lysyl-tRNA synthetase [Guillardia theta CCMP2712]
Length = 639
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 58/76 (76%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NV+ VL+ +RPYL++DGGN+ + ++ G+V +KL+GACG+CPSST TM MG+ER L
Sbjct: 484 LTWENVEKVLDTMRPYLMSDGGNVKIADIDGGIVRLKLEGACGTCPSSTMTMKMGLERGL 543
Query: 137 KEKFGDAIKDIRQVYD 152
+EK + + ++ + D
Sbjct: 544 REKIPEIVDVVQDLGD 559
>gi|440682790|ref|YP_007157585.1| nitrogen-fixing NifU domain-containing protein [Anabaena cylindrica
PCC 7122]
gi|428679909|gb|AFZ58675.1| nitrogen-fixing NifU domain-containing protein [Anabaena cylindrica
PCC 7122]
Length = 79
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 59/76 (77%), Gaps = 1/76 (1%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
+LT +NV+ VL+++RPYL++DGGN+++V ++ +V ++LQGACGSCPSS T+ MGIER
Sbjct: 4 LELTTENVETVLDELRPYLMSDGGNVELVELDGPIVKLRLQGACGSCPSSAMTLRMGIER 63
Query: 135 VLKEKFGDAIKDIRQV 150
LKE + I +I QV
Sbjct: 64 RLKEMIPE-ISEIEQV 78
>gi|170078022|ref|YP_001734660.1| NifU-like protein [Synechococcus sp. PCC 7002]
gi|169885691|gb|ACA99404.1| NifU like protein [Synechococcus sp. PCC 7002]
Length = 78
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NV+ L+++RPYL ADGGN+++V ++ VV ++LQGACGSCPSST T+ MGIER L
Sbjct: 5 LTTENVEATLDELRPYLKADGGNVELVEIDGPVVKLRLQGACGSCPSSTMTLRMGIERRL 64
Query: 137 KEKFGDAIKDIRQVY 151
+E + I ++ QV+
Sbjct: 65 RENIPE-IAEVEQVF 78
>gi|298492022|ref|YP_003722199.1| nitrogen-fixing NifU domain-containing protein ['Nostoc azollae'
0708]
gi|298233940|gb|ADI65076.1| nitrogen-fixing NifU domain protein ['Nostoc azollae' 0708]
Length = 79
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 59/76 (77%), Gaps = 1/76 (1%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
+LT +NV+ VL+++RPYL++DGGN++VV ++ +V ++LQGACGSCPSS T+ MGIER
Sbjct: 4 MELTLENVETVLDEMRPYLMSDGGNVEVVELDGPIVKLRLQGACGSCPSSAMTLRMGIER 63
Query: 135 VLKEKFGDAIKDIRQV 150
LKE + I +I QV
Sbjct: 64 RLKELIPE-IAEIEQV 78
>gi|166364297|ref|YP_001656570.1| NifU-like protein [Microcystis aeruginosa NIES-843]
gi|425435916|ref|ZP_18816360.1| NifU-like protein [Microcystis aeruginosa PCC 9432]
gi|425444839|ref|ZP_18824880.1| NifU-like protein [Microcystis aeruginosa PCC 9443]
gi|425454316|ref|ZP_18834062.1| NifU-like protein [Microcystis aeruginosa PCC 9807]
gi|440753706|ref|ZP_20932908.1| nitrogen fixation protein NifU [Microcystis aeruginosa TAIHU98]
gi|166086670|dbj|BAG01378.1| NifU-like protein [Microcystis aeruginosa NIES-843]
gi|389679464|emb|CCH91748.1| NifU-like protein [Microcystis aeruginosa PCC 9432]
gi|389735314|emb|CCI01150.1| NifU-like protein [Microcystis aeruginosa PCC 9443]
gi|389805050|emb|CCI15454.1| NifU-like protein [Microcystis aeruginosa PCC 9807]
gi|440173912|gb|ELP53281.1| nitrogen fixation protein NifU [Microcystis aeruginosa TAIHU98]
Length = 78
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT NV+ VL+++RPYL+ADGGN+++V ++ VV ++LQGACGSCPSST T+ MGIER L
Sbjct: 5 LTPNNVEQVLDEMRPYLMADGGNVELVEIDGPVVKLRLQGACGSCPSSTMTLKMGIERRL 64
Query: 137 KEKFGDAIKDIRQVY 151
+E + I ++ Q +
Sbjct: 65 REVIPE-IAEVEQAF 78
>gi|352096338|ref|ZP_08957218.1| nitrogen-fixing NifU domain-containing protein [Synechococcus sp.
WH 8016]
gi|351677032|gb|EHA60183.1| nitrogen-fixing NifU domain-containing protein [Synechococcus sp.
WH 8016]
Length = 81
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Query: 70 YSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMS 129
S LT +NV+ VL+++RP+L+ADGGN++VV ++ +V V+LQGACGSCPSST T+
Sbjct: 1 MSTETMALTNENVEKVLDELRPFLMADGGNVEVVEIDGPIVKVRLQGACGSCPSSTMTLK 60
Query: 130 MGIERVLKEKFGDAIKDIRQVY 151
MGIER ++E + + ++ QV
Sbjct: 61 MGIERKMRESIPE-VSEVVQVL 81
>gi|300867628|ref|ZP_07112276.1| nitrogen-fixing NifU-like [Oscillatoria sp. PCC 6506]
gi|300334389|emb|CBN57446.1| nitrogen-fixing NifU-like [Oscillatoria sp. PCC 6506]
Length = 79
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NV+ VL+++RPYL++DGGN+++V +E VV ++LQGACGSCPSS T+ MGIER L
Sbjct: 6 LTRENVEQVLDELRPYLMSDGGNVELVEIEGPVVQLRLQGACGSCPSSAMTLRMGIERRL 65
Query: 137 KEKFGDAIKDIRQVY 151
+E + I ++ QV
Sbjct: 66 RETIPE-IAEVEQVM 79
>gi|452824119|gb|EME31124.1| iron-sulfur cluster scaffold protein [Galdieria sulphuraria]
Length = 450
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 83/136 (61%), Gaps = 17/136 (12%)
Query: 12 ISKTPTISSKSQ------FPTKFNERLQFISIKPKNSVLQKSGSHETAIRASNPSAPAGS 65
+ PTI + S+ + N+ LQ P SV + ++ R+++ +A +GS
Sbjct: 242 FERDPTIHAISEGDWSKVIEQQSNKVLQDAVTSPFESVEVVANNNRVDERSNSNTAESGS 301
Query: 66 SPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVE-DGVVSVKLQGACGSCPSS 124
LT +NV+LVL++VRPYL +DGGN+ V+SV+ + V + LQGACG+CPSS
Sbjct: 302 F----------LTVENVNLVLDEVRPYLESDGGNVKVLSVDTNRNVVLLLQGACGTCPSS 351
Query: 125 TTTMSMGIERVLKEKF 140
TTTM +GIER+L+++F
Sbjct: 352 TTTMKLGIERILRQRF 367
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Query: 85 VLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
+LE++RP +I GG+I V VE+ V + QG + GIE LKEK G ++
Sbjct: 394 LLEEIRPAIIGLGGSISVSRVENNQVFLLYQGP--------DKIKYGIELALKEKLGSSV 445
>gi|254430627|ref|ZP_05044330.1| NifU domain protein [Cyanobium sp. PCC 7001]
gi|197625080|gb|EDY37639.1| NifU domain protein [Cyanobium sp. PCC 7001]
Length = 88
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 58/74 (78%), Gaps = 4/74 (5%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NV+ L+++RPYL+ADGGN++VV ++ +V V+LQGACGSCPSST T+ MGIER L
Sbjct: 15 LTIENVERTLDELRPYLMADGGNVEVVEIDGPIVKVRLQGACGSCPSSTMTLKMGIERKL 74
Query: 137 KEKFGDAIKDIRQV 150
+E AI ++ +V
Sbjct: 75 RE----AIPEVSEV 84
>gi|334118117|ref|ZP_08492207.1| nitrogen-fixing NifU domain-containing protein [Microcoleus
vaginatus FGP-2]
gi|428317713|ref|YP_007115595.1| nitrogen-fixing NifU domain-containing protein [Oscillatoria
nigro-viridis PCC 7112]
gi|333460102|gb|EGK88712.1| nitrogen-fixing NifU domain-containing protein [Microcoleus
vaginatus FGP-2]
gi|428241393|gb|AFZ07179.1| nitrogen-fixing NifU domain-containing protein [Oscillatoria
nigro-viridis PCC 7112]
Length = 78
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT NV+ VL+++RPYLI+DGGN+++V ++ VV ++LQGACGSCPSST T+ MGIER L
Sbjct: 5 LTRDNVETVLDEMRPYLISDGGNVELVEIDGPVVHLRLQGACGSCPSSTMTLRMGIERRL 64
Query: 137 KEKFGDAIKDIRQVY 151
+E + I ++ QV
Sbjct: 65 REAIPE-IAEVEQVM 78
>gi|119511776|ref|ZP_01630878.1| Nitrogen-fixing NifU-like protein [Nodularia spumigena CCY9414]
gi|119463549|gb|EAW44484.1| Nitrogen-fixing NifU-like protein [Nodularia spumigena CCY9414]
Length = 76
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 59/76 (77%), Gaps = 1/76 (1%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
+LT +NV+ VL+++RPYL++DGGN+++V ++ +V ++LQGACGSCPSS T+ MGIER
Sbjct: 1 MELTTENVETVLDEMRPYLMSDGGNVELVELDGPIVKLRLQGACGSCPSSAMTLRMGIER 60
Query: 135 VLKEKFGDAIKDIRQV 150
LKE + I +I QV
Sbjct: 61 RLKEMIPE-IAEIEQV 75
>gi|434404846|ref|YP_007147731.1| thioredoxin-like protein [Cylindrospermum stagnale PCC 7417]
gi|428259101|gb|AFZ25051.1| thioredoxin-like protein [Cylindrospermum stagnale PCC 7417]
Length = 76
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
+LT NV+ VL+++RPYLI+DGGN+++V ++ +V ++LQGACGSCPSST T+ MGIER
Sbjct: 1 MELTIVNVETVLDEMRPYLISDGGNVELVELDGPIVKLRLQGACGSCPSSTMTLRMGIER 60
Query: 135 VLKEKFGDAIKDIRQVY 151
LKE + I ++ Q+
Sbjct: 61 RLKEMIPE-IAEVEQIM 76
>gi|427720145|ref|YP_007068139.1| nitrogen-fixing NifU domain-containing protein [Calothrix sp. PCC
7507]
gi|427352581|gb|AFY35305.1| nitrogen-fixing NifU domain-containing protein [Calothrix sp. PCC
7507]
Length = 76
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 59/76 (77%), Gaps = 1/76 (1%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
+LT NV+ VL+++RPYL++DGGN++VV ++ VV ++LQGACGSCPSST T+ MGIER
Sbjct: 1 MELTIDNVETVLDEMRPYLMSDGGNVEVVELDGPVVKLRLQGACGSCPSSTMTLRMGIER 60
Query: 135 VLKEKFGDAIKDIRQV 150
L+E + I ++ QV
Sbjct: 61 RLREMIPE-IAEVEQV 75
>gi|116072270|ref|ZP_01469537.1| NifU-like protein [Synechococcus sp. BL107]
gi|116064792|gb|EAU70551.1| NifU-like protein [Synechococcus sp. BL107]
Length = 81
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NV+ VL+++RP+L+ADGGN++VV ++ +V V+LQGACGSCPSST T+ MGIER +
Sbjct: 8 LTLENVETVLDELRPFLMADGGNVEVVEIDGPIVKVRLQGACGSCPSSTMTLKMGIERKM 67
Query: 137 KEKFGDAIKDIRQVY 151
+E + + ++ QV
Sbjct: 68 RESIPE-VSEVVQVL 81
>gi|37522446|ref|NP_925823.1| hypothetical protein gsl2877 [Gloeobacter violaceus PCC 7421]
gi|35213447|dbj|BAC90818.1| gsl2877 [Gloeobacter violaceus PCC 7421]
Length = 85
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 60/81 (74%), Gaps = 1/81 (1%)
Query: 70 YSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMS 129
+ +L NV+LVL+++RPYL++DGGN+++V +E +V ++LQGACGSCPSST T+
Sbjct: 5 FEDEVLELNRDNVELVLDELRPYLMSDGGNVELVEIEGPIVKLRLQGACGSCPSSTYTLK 64
Query: 130 MGIERVLKEKFGDAIKDIRQV 150
+GIER ++E A+ ++ QV
Sbjct: 65 LGIERRMRELI-PAVAEVEQV 84
>gi|390440776|ref|ZP_10228979.1| Similar to tr|Q8YXA6|Q8YXA6 [Microcystis sp. T1-4]
gi|422303845|ref|ZP_16391196.1| Similar to tr|Q8YXA6|Q8YXA6 [Microcystis aeruginosa PCC 9806]
gi|389791130|emb|CCI13042.1| Similar to tr|Q8YXA6|Q8YXA6 [Microcystis aeruginosa PCC 9806]
gi|389835907|emb|CCI33105.1| Similar to tr|Q8YXA6|Q8YXA6 [Microcystis sp. T1-4]
Length = 78
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT NV+ VL+++RPYL++DGGN+++V ++ VV V+LQGACGSCPSST T+ MGIER L
Sbjct: 5 LTPDNVEKVLDEMRPYLMSDGGNVELVEIDGPVVKVRLQGACGSCPSSTMTLKMGIERRL 64
Query: 137 KEKFGDAIKDIRQVY 151
+E + I ++ Q +
Sbjct: 65 REMIPE-IAEVEQAF 78
>gi|425443541|ref|ZP_18823663.1| NifU-like protein [Microcystis aeruginosa PCC 9717]
gi|425453174|ref|ZP_18832977.1| NifU-like protein [Microcystis aeruginosa PCC 7941]
gi|425471242|ref|ZP_18850102.1| NifU-like protein [Microcystis aeruginosa PCC 9701]
gi|389715106|emb|CCI00440.1| NifU-like protein [Microcystis aeruginosa PCC 9717]
gi|389764585|emb|CCI09229.1| NifU-like protein [Microcystis aeruginosa PCC 7941]
gi|389882894|emb|CCI36666.1| NifU-like protein [Microcystis aeruginosa PCC 9701]
Length = 78
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT NV+ VL+++RPYL+ADGGN+++V ++ VV ++LQGACGSCPSST T+ MGIER L
Sbjct: 5 LTPDNVEQVLDEMRPYLMADGGNVELVEIDGPVVKLRLQGACGSCPSSTMTLKMGIERRL 64
Query: 137 KEKFGDAIKDIRQVY 151
+E + I ++ Q +
Sbjct: 65 REVIPE-IAEVEQAF 78
>gi|33866219|ref|NP_897778.1| NifU-like protein [Synechococcus sp. WH 8102]
gi|78212340|ref|YP_381119.1| NifU-like protein [Synechococcus sp. CC9605]
gi|33639194|emb|CAE08202.1| NifU-like protein [Synechococcus sp. WH 8102]
gi|78196799|gb|ABB34564.1| NifU-like protein [Synechococcus sp. CC9605]
Length = 81
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Query: 70 YSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMS 129
S LT +NV+ VL+++RP+L+ADGGN++VV ++ +V V+LQGACGSCPSST T+
Sbjct: 1 MSTETMALTLENVEKVLDELRPFLMADGGNVEVVELDGPIVKVRLQGACGSCPSSTMTLK 60
Query: 130 MGIERVLKEKFGDAIKDIRQVY 151
MGIER ++E + + ++ QV
Sbjct: 61 MGIERKMRESIPE-VSEVVQVL 81
>gi|427738810|ref|YP_007058354.1| thioredoxin-like protein [Rivularia sp. PCC 7116]
gi|427373851|gb|AFY57807.1| thioredoxin-like protein [Rivularia sp. PCC 7116]
Length = 76
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 59/76 (77%), Gaps = 1/76 (1%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
+LT KNV+ VL+++RPYL++DGGN+++V ++ VV ++LQGACGSCPSS T+ MGIER
Sbjct: 1 MELTNKNVETVLDELRPYLMSDGGNVELVELDGPVVKLRLQGACGSCPSSAMTLRMGIER 60
Query: 135 VLKEKFGDAIKDIRQV 150
L+E + I ++ QV
Sbjct: 61 RLREMIPE-IAEVEQV 75
>gi|90655381|gb|ABD96222.1| NifU-like protein [uncultured marine type-A Synechococcus GOM 3M9]
Length = 81
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 60/81 (74%), Gaps = 4/81 (4%)
Query: 70 YSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMS 129
S LT +NV+ VL+++RP+L+ADGGN++VV ++ +V V+LQGACGSCPSST T+
Sbjct: 1 MSTETMALTHENVEKVLDELRPFLMADGGNVEVVELDGPIVKVRLQGACGSCPSSTMTLK 60
Query: 130 MGIERVLKEKFGDAIKDIRQV 150
MGIER ++E AI ++ +V
Sbjct: 61 MGIERKMRE----AIPEVSEV 77
>gi|67921653|ref|ZP_00515171.1| Nitrogen-fixing NifU, C-terminal [Crocosphaera watsonii WH 8501]
gi|416385495|ref|ZP_11684792.1| nitrogen-fixing NifU domain protein [Crocosphaera watsonii WH 0003]
gi|67856765|gb|EAM52006.1| Nitrogen-fixing NifU, C-terminal [Crocosphaera watsonii WH 8501]
gi|357264875|gb|EHJ13707.1| nitrogen-fixing NifU domain protein [Crocosphaera watsonii WH 0003]
Length = 80
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
L NV+ VL+++RPYL+ADGGN+++V +E VV ++LQGACGSCPSST T+ MGIER L
Sbjct: 7 LNPDNVETVLDEMRPYLMADGGNVELVDIEGPVVKLRLQGACGSCPSSTMTLRMGIERRL 66
Query: 137 KEKFGDAIKDIRQVY 151
+E + I ++ QV
Sbjct: 67 REMIPE-IGEVEQVM 80
>gi|17228804|ref|NP_485352.1| hypothetical protein asr1309 [Nostoc sp. PCC 7120]
gi|75909243|ref|YP_323539.1| nitrogen-fixing NifU-like protein [Anabaena variabilis ATCC 29413]
gi|17130656|dbj|BAB73266.1| asr1309 [Nostoc sp. PCC 7120]
gi|75702968|gb|ABA22644.1| Nitrogen-fixing NifU-like protein [Anabaena variabilis ATCC 29413]
Length = 76
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 59/76 (77%), Gaps = 1/76 (1%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
+LT NV+ VL+++RPYLI+DGGN+++V ++ +V ++LQGACGSCPSST T+ MGIER
Sbjct: 1 MELTIDNVETVLDEMRPYLISDGGNVELVELDGPIVKLRLQGACGSCPSSTMTLRMGIER 60
Query: 135 VLKEKFGDAIKDIRQV 150
L+E + I ++ QV
Sbjct: 61 RLREMIPE-IAEVEQV 75
>gi|318040472|ref|ZP_07972428.1| NifU-like protein [Synechococcus sp. CB0101]
Length = 96
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 58/74 (78%), Gaps = 4/74 (5%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NV+ L+++RPYL+ADGGN++VV ++ +V V+LQGACGSCPSST T+ MGIER L
Sbjct: 23 LTIENVERTLDELRPYLMADGGNVEVVEIDGPIVKVRLQGACGSCPSSTMTLKMGIERKL 82
Query: 137 KEKFGDAIKDIRQV 150
+E AI ++ +V
Sbjct: 83 RE----AIPEVSEV 92
>gi|427725038|ref|YP_007072315.1| nitrogen-fixing NifU domain-containing protein [Leptolyngbya sp.
PCC 7376]
gi|427356758|gb|AFY39481.1| nitrogen-fixing NifU domain-containing protein [Leptolyngbya sp.
PCC 7376]
Length = 78
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NV+ L+++RPYL+ADGGN+++V ++ +V ++LQGACGSCPSS T+ MGIER L
Sbjct: 5 LTTENVETTLDELRPYLMADGGNVELVEIDGPIVKLRLQGACGSCPSSAMTLRMGIERKL 64
Query: 137 KEKFGDAIKDIRQVY 151
+E + I +I QV+
Sbjct: 65 REVIPE-IAEIEQVF 78
>gi|78185152|ref|YP_377587.1| NifU-like protein [Synechococcus sp. CC9902]
gi|78169446|gb|ABB26543.1| NifU-like protein [Synechococcus sp. CC9902]
Length = 81
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Query: 70 YSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMS 129
S LT NV+ VL+++RP+L+ADGGN++VV ++ +V V+LQGACGSCPSST T+
Sbjct: 1 MSTETMALTLDNVEKVLDELRPFLMADGGNVEVVEIDGPIVKVRLQGACGSCPSSTMTLK 60
Query: 130 MGIERVLKEKFGDAIKDIRQVY 151
MGIER ++E + + ++ QV
Sbjct: 61 MGIERKMRESIPE-VSEVVQVL 81
>gi|307153189|ref|YP_003888573.1| nitrogen-fixing NifU domain-containing protein [Cyanothece sp. PCC
7822]
gi|306983417|gb|ADN15298.1| nitrogen-fixing NifU domain protein [Cyanothece sp. PCC 7822]
Length = 78
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT+ NV+ VL+++RPYL+ADGGN+++V ++ +V ++LQGACGSCPSST T+ MGIER L
Sbjct: 5 LTSDNVETVLDEMRPYLMADGGNVELVEIDGPIVKLRLQGACGSCPSSTMTLKMGIERRL 64
Query: 137 KEKFGDAIKDIRQV 150
+E + I ++ QV
Sbjct: 65 REYIPE-IVEVEQV 77
>gi|428769088|ref|YP_007160878.1| nitrogen-fixing NifU domain-containing protein [Cyanobacterium
aponinum PCC 10605]
gi|428683367|gb|AFZ52834.1| nitrogen-fixing NifU domain-containing protein [Cyanobacterium
aponinum PCC 10605]
Length = 78
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 58/74 (78%), Gaps = 1/74 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NV+ VL+++RPYL+ADGGN+++V ++ V ++LQGACGSCPSST T+ MGIER L
Sbjct: 5 LTPENVEQVLDELRPYLMADGGNVELVEIDGPTVKLRLQGACGSCPSSTMTLRMGIERRL 64
Query: 137 KEKFGDAIKDIRQV 150
+E + I ++ QV
Sbjct: 65 REYIPE-IAEVEQV 77
>gi|443310785|ref|ZP_21040425.1| thioredoxin-like protein [Synechocystis sp. PCC 7509]
gi|442779139|gb|ELR89392.1| thioredoxin-like protein [Synechocystis sp. PCC 7509]
Length = 76
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 59/76 (77%), Gaps = 1/76 (1%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
+LT NV+ VL+++RPYLI+DGGN+++V ++ +V ++LQGACGSCPSST T+ MGIER
Sbjct: 1 MELTIDNVETVLDEMRPYLISDGGNVELVELDGPIVKLRLQGACGSCPSSTMTLRMGIER 60
Query: 135 VLKEKFGDAIKDIRQV 150
L+E + I ++ Q+
Sbjct: 61 RLREMIPE-IAEVEQI 75
>gi|427420653|ref|ZP_18910836.1| thioredoxin-like protein [Leptolyngbya sp. PCC 7375]
gi|425756530|gb|EKU97384.1| thioredoxin-like protein [Leptolyngbya sp. PCC 7375]
Length = 79
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT NV+ VL+++RPYL+ADGGN+++V ++ VV ++LQGACGSCPSS T+ MGIER L
Sbjct: 6 LTNDNVEKVLDELRPYLMADGGNVELVDIDGPVVKLRLQGACGSCPSSAMTLRMGIERRL 65
Query: 137 KEKFGDAIKDIRQV 150
+E F I +I QV
Sbjct: 66 RE-FIPEIAEIEQV 78
>gi|159902957|ref|YP_001550301.1| NifU-like protein [Prochlorococcus marinus str. MIT 9211]
gi|159888133|gb|ABX08347.1| NifU-like protein [Prochlorococcus marinus str. MIT 9211]
Length = 81
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 53/69 (76%)
Query: 70 YSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMS 129
+ LT NV+ VL+++RP+L+ADGGN+++V ++ +V V+LQGACGSCPSST T+
Sbjct: 1 MTQETMPLTKDNVEKVLDELRPFLMADGGNVEIVEIDGPIVKVRLQGACGSCPSSTMTLK 60
Query: 130 MGIERVLKE 138
MGIER L+E
Sbjct: 61 MGIERKLRE 69
>gi|113476915|ref|YP_722976.1| nitrogen-fixing NifU-like protein [Trichodesmium erythraeum IMS101]
gi|110167963|gb|ABG52503.1| nitrogen-fixing NifU-like [Trichodesmium erythraeum IMS101]
Length = 80
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 53/64 (82%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NV++VL+++RPYL ADGGN+++V +E +V ++LQGAC SCPSST T+ MGIER L
Sbjct: 7 LTNENVEIVLDELRPYLAADGGNVELVDIEGPIVKLRLQGACSSCPSSTMTLKMGIERKL 66
Query: 137 KEKF 140
+E+
Sbjct: 67 REEI 70
>gi|428205137|ref|YP_007089490.1| nitrogen-fixing NifU domain-containing protein [Chroococcidiopsis
thermalis PCC 7203]
gi|428007058|gb|AFY85621.1| nitrogen-fixing NifU domain protein [Chroococcidiopsis thermalis
PCC 7203]
Length = 76
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 59/76 (77%), Gaps = 1/76 (1%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
+LT NV+ VL+++RPYL++DGGN+++V ++ +V ++LQGACGSCPSST T+ MGIER
Sbjct: 1 MELTTDNVETVLDEMRPYLMSDGGNVELVELDGPIVRLRLQGACGSCPSSTMTLRMGIER 60
Query: 135 VLKEKFGDAIKDIRQV 150
L+E + I ++ QV
Sbjct: 61 RLREMIPE-IAEVEQV 75
>gi|148241647|ref|YP_001226804.1| NifU-like protein [Synechococcus sp. RCC307]
gi|147849957|emb|CAK27451.1| NifU-like protein [Synechococcus sp. RCC307]
Length = 88
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 58/75 (77%), Gaps = 4/75 (5%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NV+ L+++RP+L+ADGGN++VV ++ +V V+LQGACGSCPSST T+ MGIER L
Sbjct: 15 LTLENVERTLDELRPFLMADGGNVEVVEIDGPIVKVRLQGACGSCPSSTMTLKMGIERKL 74
Query: 137 KEKFGDAIKDIRQVY 151
+E AI ++ +V
Sbjct: 75 RE----AIPEVSEVV 85
>gi|434395293|ref|YP_007130240.1| nitrogen-fixing NifU domain-containing protein [Gloeocapsa sp. PCC
7428]
gi|428267134|gb|AFZ33080.1| nitrogen-fixing NifU domain-containing protein [Gloeocapsa sp. PCC
7428]
Length = 76
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
+LT NV+ VL+++RPYL++DGGN+++V ++ VV ++LQGACG+CPSST T+ MGIER
Sbjct: 1 MELTVDNVETVLDELRPYLMSDGGNVELVELDGPVVKLRLQGACGACPSSTMTLRMGIER 60
Query: 135 VLKEKFGDAIKDIRQVY 151
L+E + I ++ QV
Sbjct: 61 RLREMIPE-IAEVEQVL 76
>gi|428772315|ref|YP_007164103.1| nitrogen-fixing NifU domain-containing protein [Cyanobacterium
stanieri PCC 7202]
gi|428686594|gb|AFZ46454.1| nitrogen-fixing NifU domain protein [Cyanobacterium stanieri PCC
7202]
Length = 78
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT NV+ VL+++RPYL+ADGGN+++V ++ V ++LQGACGSCPSST T+ MGIER L
Sbjct: 5 LTNDNVEQVLDELRPYLMADGGNVELVEIDGPTVKLRLQGACGSCPSSTMTLRMGIERRL 64
Query: 137 KEKFGDAIKDIRQV 150
+E + I ++ QV
Sbjct: 65 RENIPE-IAEVEQV 77
>gi|452819457|gb|EME26515.1| iron-sulfur cluster scaffold protein [Galdieria sulphuraria]
Length = 203
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NV+ VLE++RPYLIADGGN+ + ++ V + L+GACGSCPSST T+ MGIE L
Sbjct: 49 LTKENVEQVLEELRPYLIADGGNVSLTGIDGATVRLTLEGACGSCPSSTVTLRMGIETRL 108
Query: 137 KEKFGDAIKDIRQVYDEE 154
KEK I +I V EE
Sbjct: 109 KEK----IPEIEAVVQEE 122
>gi|72383588|ref|YP_292943.1| NifU-like protein [Prochlorococcus marinus str. NATL2A]
gi|124025184|ref|YP_001014300.1| NifU-like protein [Prochlorococcus marinus str. NATL1A]
gi|72003438|gb|AAZ59240.1| NifU-like protein [Prochlorococcus marinus str. NATL2A]
gi|123960252|gb|ABM75035.1| NifU-like protein [Prochlorococcus marinus str. NATL1A]
Length = 81
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 53/69 (76%)
Query: 70 YSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMS 129
S LT +NV+ VL+++RP+L+ADGGN+++ ++ +V V+LQGACGSCPSST T+
Sbjct: 1 MSDETLALTTENVEKVLDELRPFLMADGGNVEIAEIDGPIVKVRLQGACGSCPSSTMTLK 60
Query: 130 MGIERVLKE 138
MGIER L+E
Sbjct: 61 MGIERKLRE 69
>gi|413943265|gb|AFW75914.1| photosystemI1 [Zea mays]
Length = 266
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query: 70 YSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMS 129
++ LT +NV+ VL++VRP L+ADGGN+ + ++ VV +KLQGACGSCPSST T+
Sbjct: 108 WAVRVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLK 167
Query: 130 MGIERVLKEKFGDAIKDIRQVYDEE 154
MGIE L++K D I ++ Q+ D E
Sbjct: 168 MGIETRLRDKIPD-ILEVEQIVDTE 191
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLIA-DGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
DLTA NVD VL+++RPYL GG+++++ ++ VV +++ G + T+ + +
Sbjct: 194 LDLTADNVDKVLDEIRPYLSGTGGGSLELLQIDGYVVKIRIGGPA----AGVMTVRVAVT 249
Query: 134 RVLKEKF 140
+ L+EK
Sbjct: 250 QKLREKI 256
>gi|186681985|ref|YP_001865181.1| NifU domain-containing protein [Nostoc punctiforme PCC 73102]
gi|186464437|gb|ACC80238.1| nitrogen-fixing NifU domain protein [Nostoc punctiforme PCC 73102]
Length = 76
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
+LT NV+ VL+++RPYL++DGGN+++V ++ VV ++LQGACGSCPSS T+ MGIER
Sbjct: 1 MELTIDNVETVLDEMRPYLMSDGGNVELVELDGPVVKLRLQGACGSCPSSAMTLRMGIER 60
Query: 135 VLKEKFGDAIKDIRQV 150
LKE + I +I QV
Sbjct: 61 RLKEMIPE-IAEIEQV 75
>gi|443658650|ref|ZP_21132193.1| nifU-like domain protein [Microcystis aeruginosa DIANCHI905]
gi|443669660|ref|ZP_21134859.1| nifU-like domain protein [Microcystis aeruginosa DIANCHI905]
gi|159028416|emb|CAO89859.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443330062|gb|ELS44811.1| nifU-like domain protein [Microcystis aeruginosa DIANCHI905]
gi|443332884|gb|ELS47468.1| nifU-like domain protein [Microcystis aeruginosa DIANCHI905]
Length = 78
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
LT NV+ VL+++RPYL++DGGN+++V ++ VV V+LQGACGSCPSST T+ MGIER
Sbjct: 3 LTLTPDNVEKVLDEMRPYLMSDGGNVELVEIDGPVVKVRLQGACGSCPSSTMTLKMGIER 62
Query: 135 VLKEKFGDAIKDIRQ 149
L+E + I ++ Q
Sbjct: 63 RLREMIPE-IAEVEQ 76
>gi|443314802|ref|ZP_21044333.1| thioredoxin-like protein [Leptolyngbya sp. PCC 6406]
gi|442785597|gb|ELR95406.1| thioredoxin-like protein [Leptolyngbya sp. PCC 6406]
Length = 79
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 58/74 (78%), Gaps = 1/74 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NV+ VL+++RPYL+ADGGN+++V ++ VV ++LQGACGSCPSS T+ MGIER L
Sbjct: 6 LTDENVEKVLDEMRPYLMADGGNVELVELDGPVVRLRLQGACGSCPSSAMTLRMGIERRL 65
Query: 137 KEKFGDAIKDIRQV 150
+E F I ++ QV
Sbjct: 66 RE-FIPEIAEVEQV 78
>gi|427728580|ref|YP_007074817.1| thioredoxin-like protein [Nostoc sp. PCC 7524]
gi|427364499|gb|AFY47220.1| thioredoxin-like protein [Nostoc sp. PCC 7524]
Length = 76
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
+LT +NV+ VL+++RPYL++DGGN+++V ++ +V ++LQGACGSCPSST T+ MG+ER
Sbjct: 1 MELTVENVEKVLDEMRPYLMSDGGNVELVELDGPIVKLRLQGACGSCPSSTMTLRMGLER 60
Query: 135 VLKEKFGDAIKDIRQVY 151
L+E + I ++ Q+
Sbjct: 61 RLREMIPE-IAEVEQIM 76
>gi|226503511|ref|NP_001150793.1| NFU3 [Zea mays]
gi|195641898|gb|ACG40417.1| NFU3 [Zea mays]
Length = 213
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query: 70 YSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMS 129
++ LT +NV+ VL++VRP L+ADGGN+ + ++ VV +KLQGACGSCPSST T+
Sbjct: 55 WAVRVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLK 114
Query: 130 MGIERVLKEKFGDAIKDIRQVYDEE 154
MGIE L++K D I ++ Q+ D E
Sbjct: 115 MGIETRLRDKIPD-ILEVEQIVDTE 138
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLIA-DGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
DLTA NVD VL+++RPYL GG+++++ ++ VV +++ G + T+ + +
Sbjct: 141 LDLTADNVDKVLDEIRPYLSGTGGGSLELLQIDGYVVKIRIGGPA----AGVMTVRVAVT 196
Query: 134 RVLKEKF 140
+ L+EK
Sbjct: 197 QKLREKI 203
>gi|323450669|gb|EGB06549.1| hypothetical protein AURANDRAFT_9527, partial [Aureococcus
anophagefferens]
Length = 69
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 53/69 (76%), Gaps = 2/69 (2%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGV--VSVKLQGACGSCPSSTTTMSMGIE 133
D + +NVD VL+ VRPYL+ADGGN+ VVS + V + L+GACGSCPSST TM MGIE
Sbjct: 1 DFSLENVDKVLDQVRPYLVADGGNVAVVSADPDSKDVILHLEGACGSCPSSTQTMKMGIE 60
Query: 134 RVLKEKFGD 142
RVL+E++ D
Sbjct: 61 RVLRERWAD 69
>gi|428201125|ref|YP_007079714.1| thioredoxin-like protein [Pleurocapsa sp. PCC 7327]
gi|427978557|gb|AFY76157.1| thioredoxin-like protein [Pleurocapsa sp. PCC 7327]
Length = 78
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 52/62 (83%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT NV+ VL+++RPYL+ADGGN+++V ++ +V ++LQGACGSCPSST T+ MGIER L
Sbjct: 5 LTPDNVEQVLDEMRPYLMADGGNVELVEIDGPIVRLRLQGACGSCPSSTMTLKMGIERRL 64
Query: 137 KE 138
+E
Sbjct: 65 RE 66
>gi|414866515|tpg|DAA45072.1| TPA: hypothetical protein ZEAMMB73_590198 [Zea mays]
gi|414866516|tpg|DAA45073.1| TPA: hypothetical protein ZEAMMB73_590198 [Zea mays]
Length = 113
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 64/101 (63%), Gaps = 12/101 (11%)
Query: 25 PTKFNERLQFISIKPKNSVLQK-------SGSHE--TAIRASNPSAPAGSSPGLYSAHQF 75
P + R+ S P++ LQ SGS A AS P AP G GLYSA +
Sbjct: 15 PPRIRIRITKSSPLPRHRCLQSGPSKIWTSGSRACLVAASASTPPAPGG---GLYSAATY 71
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQG 116
+LT +NVD VL+DVRPYLI+DGGN+ VV+VEDGV+S+KL+G
Sbjct: 72 ELTPENVDRVLDDVRPYLISDGGNVTVVAVEDGVISLKLEG 112
>gi|307108673|gb|EFN56913.1| hypothetical protein CHLNCDRAFT_144603 [Chlorella variabilis]
Length = 149
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 53/66 (80%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
+LT +NV+ VL++VRPYL+ADGGN++ V ++ VV ++L GACGSCPSS TTM+MGI+R
Sbjct: 18 LELTEENVETVLDEVRPYLMADGGNVEFVEIDGPVVYLRLAGACGSCPSSLTTMTMGIKR 77
Query: 135 VLKEKF 140
L E+
Sbjct: 78 RLMERI 83
>gi|326487760|dbj|BAK05552.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 219
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LTA+NV+LVL+ VRPYL+ADGGN+ + ++ VV +KLQGACG+CP S TM MGI+R L
Sbjct: 68 LTAENVELVLDQVRPYLMADGGNVALHEIDGNVVRLKLQGACGACPGSVMTMRMGIQRRL 127
Query: 137 KEKFGDAIKDIRQVYDEE 154
++ + I + + D E
Sbjct: 128 MDEIPE-IAAVEAITDNE 144
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLI-ADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
L +NV+ VL+++RPYL A GGN+ V++ V V+L+G + + + +
Sbjct: 147 LKLKKENVEKVLDEIRPYLTGAGGGNLRFVAINRFFVKVQLRGPA----AGVAAIRVAVA 202
Query: 134 RVLKEKF 140
+ L+EK
Sbjct: 203 QKLREKI 209
>gi|260436644|ref|ZP_05790614.1| NifU domain protein [Synechococcus sp. WH 8109]
gi|260414518|gb|EEX07814.1| NifU domain protein [Synechococcus sp. WH 8109]
Length = 76
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NV+ VL+++RP+L+ADGGN++VV ++ +V V+LQGACGSCPSST T+ MGIER +
Sbjct: 3 LTLENVEKVLDELRPFLMADGGNVEVVELDGPIVKVRLQGACGSCPSSTMTLKMGIERKM 62
Query: 137 KEKFGDAIKDIRQVY 151
+E + + ++ QV
Sbjct: 63 RESIPE-VSEVVQVL 76
>gi|449017164|dbj|BAM80566.1| similar to iron-sulfur cluster scaffold protein [Cyanidioschyzon
merolae strain 10D]
Length = 214
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 54/70 (77%)
Query: 71 SAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSM 130
++ L+ +V++VL+++RPYL+ADGGN+ +V ++ V +KL+GACGSCPSST TM M
Sbjct: 56 TSEPLTLSEASVEVVLDELRPYLMADGGNVSIVEIDGATVRLKLEGACGSCPSSTMTMKM 115
Query: 131 GIERVLKEKF 140
GIE+ L+E+
Sbjct: 116 GIEKRLRERI 125
>gi|397620240|gb|EJK65619.1| hypothetical protein THAOC_13500 [Thalassiosira oceanica]
Length = 227
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 56/76 (73%), Gaps = 4/76 (5%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
DLT NVD+VL+++RPYL+ DGGN+ + ++ VV ++LQG CG+CPSST TM MG+ER
Sbjct: 72 LDLTWDNVDMVLDEMRPYLLQDGGNVAISEIDGPVVRLELQGECGTCPSSTQTMKMGLER 131
Query: 135 VLKEKFGDAIKDIRQV 150
L E+ I +I++V
Sbjct: 132 KLMER----IPEIQEV 143
Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDV--VSVEDGV---VSVKLQGACGSCPSSTTTMSM 130
DLT +++VL+ VRP+L GG ID+ +S E G+ +++K+ G+ S S ++
Sbjct: 152 DLTEDQINVVLDSVRPFLSVAGGTIDIDSISGEGGLQPTITLKMDGSAASLNSVKLEIAQ 211
Query: 131 GIER 134
++R
Sbjct: 212 RLQR 215
>gi|255069975|ref|XP_002507069.1| iron-sulfur cluster scaffold protein, plastid precursor [Micromonas
sp. RCC299]
gi|226522344|gb|ACO68327.1| iron-sulfur cluster scaffold protein, plastid precursor [Micromonas
sp. RCC299]
Length = 393
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
+LT +NVD L +VRP+L ADGG+++VV +EDG+V+V++ GACG+C SST T+ GIE
Sbjct: 239 ELTVENVDAALNEVRPFLAADGGDVEVVGIEDGIVAVRMFGACGTCSSSTATLKGGIEAT 298
Query: 136 LKEKFG-DAIKDI 147
L + FG +AIK++
Sbjct: 299 LFKVFGREAIKEV 311
>gi|242094042|ref|XP_002437511.1| hypothetical protein SORBIDRAFT_10g028390 [Sorghum bicolor]
gi|241915734|gb|EER88878.1| hypothetical protein SORBIDRAFT_10g028390 [Sorghum bicolor]
Length = 240
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query: 70 YSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMS 129
++ LT +NV+ VL++VRP L+ADGGN+ + ++ VV +KLQGACGSCPSST T+
Sbjct: 82 WAVRVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLK 141
Query: 130 MGIERVLKEKFGDAIKDIRQVYDEE 154
MGIE L++K D I ++ Q+ D E
Sbjct: 142 MGIETRLRDKIPD-ILEVEQIVDTE 165
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLIA-DGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
DL A NV+ VL+++RPYL GG+++ + ++ VV +++ G + T+ + +
Sbjct: 168 LDLNADNVEKVLDEIRPYLSGTGGGSLEQLQIDGYVVKIRISGPA----AGVMTVRVAVT 223
Query: 134 RVLKEKF 140
+ L+EK
Sbjct: 224 QKLREKI 230
>gi|115487614|ref|NP_001066294.1| Os12g0176200 [Oryza sativa Japonica Group]
gi|75147032|sp|Q84LK7.1|NIFU1_ORYSJ RecName: Full=NifU-like protein 1, chloroplastic; AltName:
Full=OsNifu1; Flags: Precursor
gi|30698492|dbj|BAC76603.1| NifU1 [Oryza sativa Japonica Group]
gi|77553807|gb|ABA96603.1| nitrogen fixation protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113648801|dbj|BAF29313.1| Os12g0176200 [Oryza sativa Japonica Group]
Length = 226
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 60 SAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACG 119
A AG P +A Q LTA NV+ VL+ VRPYL ADGG++ + + VV +KLQGACG
Sbjct: 60 GAIAGLDP--VTAVQLPLTAGNVESVLDQVRPYLTADGGDVALHEIAGNVVRLKLQGACG 117
Query: 120 SCPSSTTTMSMGIERVLKEKFGDAIKDIRQVYDEE 154
SCPSS T+ GIER L EK D + + V D+E
Sbjct: 118 SCPSSLITIKRGIERRLMEKIPD-VAAVEPVTDKE 151
Score = 36.2 bits (82), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLIA-DGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+L +NV+ VL ++RPYL GG + + ++ +V V+L G + T+ + +
Sbjct: 154 LELNEENVEKVLNEIRPYLAGTGGGGLQFLMIKGPIVKVRLTGPA----AVVRTVRIAVS 209
Query: 134 RVLKEKF 140
+ L+EK
Sbjct: 210 KKLREKI 216
>gi|222616724|gb|EEE52856.1| hypothetical protein OsJ_35404 [Oryza sativa Japonica Group]
Length = 219
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 60 SAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACG 119
A AG P +A Q LTA NV+ VL+ VRPYL ADGG++ + + VV +KLQGACG
Sbjct: 53 GAIAGLDP--VTAVQLPLTAGNVESVLDQVRPYLTADGGDVALHEIAGNVVRLKLQGACG 110
Query: 120 SCPSSTTTMSMGIERVLKEKFGDAIKDIRQVYDEE 154
SCPSS T+ GIER L EK D + + V D+E
Sbjct: 111 SCPSSLITIKRGIERRLMEKIPD-VAAVEPVTDKE 144
Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLIA-DGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+L +NV+ VL ++RPYL GG + + ++ +V V+L G + T+ + +
Sbjct: 147 LELNEENVEKVLNEIRPYLAGTGGGGLQFLMIKGPIVKVRLTGPA----AVVRTVRIAVS 202
Query: 134 RVLKEKF 140
+ L+EK
Sbjct: 203 KKLREKI 209
>gi|218186519|gb|EEC68946.1| hypothetical protein OsI_37662 [Oryza sativa Indica Group]
Length = 221
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 60 SAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACG 119
A AG P +A Q LTA NV+ VL+ VRPYL ADGG++ + + VV +KLQGACG
Sbjct: 55 GAIAGLDP--VTAVQLPLTAGNVESVLDQVRPYLTADGGDVALHEIAGNVVRLKLQGACG 112
Query: 120 SCPSSTTTMSMGIERVLKEKFGDAIKDIRQVYDEE 154
SCPSS T+ GIER L EK D + + V D+E
Sbjct: 113 SCPSSLITIKRGIERRLMEKIPD-VAAVEPVTDKE 146
>gi|428301489|ref|YP_007139795.1| nitrogen-fixing NifU domain-containing protein [Calothrix sp. PCC
6303]
gi|428238033|gb|AFZ03823.1| nitrogen-fixing NifU domain-containing protein [Calothrix sp. PCC
6303]
Length = 85
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
+LT NV+ VL+++RPYL++DGGN+++V ++ +V ++LQGACG+CPSS T+ MGIER
Sbjct: 10 MELTTDNVEQVLDEMRPYLMSDGGNVELVELDGPIVKLRLQGACGTCPSSAMTLRMGIER 69
Query: 135 VLKEKFGDAIKDIRQV 150
L+E + I ++ QV
Sbjct: 70 RLREMIPE-IAEVEQV 84
>gi|115469688|ref|NP_001058443.1| Os06g0694500 [Oryza sativa Japonica Group]
gi|53791826|dbj|BAD53892.1| putative Nuclear-encoded plastid gene, NifU1 [Oryza sativa Japonica
Group]
gi|53792847|dbj|BAD53880.1| putative Nuclear-encoded plastid gene, NifU1 [Oryza sativa Japonica
Group]
gi|113596483|dbj|BAF20357.1| Os06g0694500 [Oryza sativa Japonica Group]
gi|215678926|dbj|BAG96356.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215695250|dbj|BAG90441.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218198813|gb|EEC81240.1| hypothetical protein OsI_24300 [Oryza sativa Indica Group]
gi|222636145|gb|EEE66277.1| hypothetical protein OsJ_22478 [Oryza sativa Japonica Group]
Length = 219
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Query: 70 YSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMS 129
++ LT +NV++VL+ VRP L+ADGGN+ + ++ VV +KLQGACGSCPSST T+
Sbjct: 61 WAVRVLPLTEENVEMVLDQVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLK 120
Query: 130 MGIERVLKEKFGDAIKDIRQVYDEE 154
MGIE L++K + I + Q+ D E
Sbjct: 121 MGIETRLRDKIPE-ILAVEQIVDTE 144
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLIA-DGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+L NVD VL+++RPYL GG++D+V +++ VV V+L G + T+ + +
Sbjct: 147 LELNHDNVDKVLDEIRPYLSGTGGGSLDLVQIDESVVKVRLTGPA----AGVMTVRVAVT 202
Query: 134 RVLKEKF 140
+ L+EK
Sbjct: 203 QKLREKI 209
>gi|33239869|ref|NP_874811.1| NifU-like protein [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|33237395|gb|AAP99463.1| Thioredoxin family protein [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
Length = 81
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 51/62 (82%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT NV+ VL+++RP+L+ADGGN+++V ++ +V V+LQGACGSCPSST T+ MGIER L
Sbjct: 8 LTHANVEKVLDELRPFLMADGGNVEIVEIDGPIVKVRLQGACGSCPSSTMTLKMGIERKL 67
Query: 137 KE 138
E
Sbjct: 68 CE 69
>gi|219113897|ref|XP_002176135.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217402927|gb|EEC42886.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 77
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 59/78 (75%), Gaps = 3/78 (3%)
Query: 78 TAKNVDLVLEDVRPYLIADGGNIDVVSVE--DGVVSVKLQGACGSCPSSTTTMSMGIERV 135
T VD VL++VRPYLI+DGGN+ V SV+ V +KL+GACGSC SST TM MGIERV
Sbjct: 1 TIDGVDKVLDEVRPYLISDGGNVSVESVDADSQTVYLKLEGACGSCSSSTVTMQMGIERV 60
Query: 136 LKEKFGDAIKDIRQVYDE 153
LKEK+ + ++++ QV D+
Sbjct: 61 LKEKYPN-LREVLQVEDD 77
>gi|298708751|emb|CBJ30713.1| NifU-like protein 2, chloroplast precursor (AtCNfu2) (AtCnfU-V)
[Ectocarpus siliculosus]
Length = 276
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 52/64 (81%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NV+ VL+++RPYL++DGGN+ VV ++ VV ++L+GACGSCPSST TM MG+ER L
Sbjct: 122 LTLENVETVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRL 181
Query: 137 KEKF 140
++
Sbjct: 182 VQRI 185
Score = 36.2 bits (82), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDV-----VSVEDGVVSVKLQGACGSCPSSTTTMSM 130
+LT +NV+ VL+ VRP+L GG+I++ VS V+++K+ G+ S S +
Sbjct: 200 ELTVENVEKVLDGVRPFLSVAGGSINIQSLTGVSSIQPVITLKMTGSSASLKSIRMEIMQ 259
Query: 131 GIER 134
I+R
Sbjct: 260 RIQR 263
>gi|357123550|ref|XP_003563473.1| PREDICTED: nifU-like protein 3, chloroplastic-like [Brachypodium
distachyon]
Length = 211
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query: 70 YSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMS 129
++ LT +NV+ VL++VRP L+ADGGN+ + ++ VV + LQGACGSCPSST T+
Sbjct: 53 WAVRVMPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVVLMLQGACGSCPSSTMTLK 112
Query: 130 MGIERVLKEKFGDAIKDIRQVYDEE 154
MGIE L++K + I ++ Q++D E
Sbjct: 113 MGIETRLRDKIPE-ILEVEQIHDTE 136
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLIA-DGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+L +NV+ VL+++RPYL+ GG++D+V ++ VV +++ G +S T+ + +
Sbjct: 139 LELNLENVEKVLDEIRPYLVGTGGGSLDLVQIDGFVVKIQISGPA----ASVMTVRVAVT 194
Query: 134 RVLKEKF 140
+ L+EK
Sbjct: 195 QKLREKI 201
>gi|443476908|ref|ZP_21066789.1| nitrogen-fixing NifU domain-containing protein [Pseudanabaena
biceps PCC 7429]
gi|443018038|gb|ELS32358.1| nitrogen-fixing NifU domain-containing protein [Pseudanabaena
biceps PCC 7429]
Length = 78
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 51/61 (83%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NV+ VL+++RPYL++DGGN+++V +E +V ++LQGACGSCPSS T+ MGIER L
Sbjct: 5 LTRENVENVLDELRPYLMSDGGNVELVDIEGPIVRLRLQGACGSCPSSAMTLRMGIERKL 64
Query: 137 K 137
K
Sbjct: 65 K 65
>gi|413925509|gb|AFW65441.1| hypothetical protein ZEAMMB73_197216 [Zea mays]
Length = 145
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDA 143
+VL++VRPYL+ADGGN+ + ++ VV +KLQGACGSCP+S TTM MGIER L EK +
Sbjct: 1 MVLDEVRPYLMADGGNVALHEIDGNVVRLKLQGACGSCPASVTTMKMGIERRLMEKIPEI 60
Query: 144 IKDIRQVYDEE 154
+ + + DEE
Sbjct: 61 VA-VEPIADEE 70
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLIA-DGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+L +N++ VL+++RPYL GG ++ V++E+ +V V+L G + T+ + +
Sbjct: 73 LELNQENIEKVLDEIRPYLAGTGGGELEFVTIEEPIVKVRLTGPA----AGVMTVRVALT 128
Query: 134 RVLKEKF 140
+ L+EK
Sbjct: 129 QKLREKI 135
>gi|449461189|ref|XP_004148324.1| PREDICTED: nifU-like protein 3, chloroplastic-like [Cucumis
sativus]
gi|449510563|ref|XP_004163700.1| PREDICTED: nifU-like protein 3, chloroplastic-like [Cucumis
sativus]
Length = 227
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NV+ VL++VRP L+ADGGN+ + ++ VV +KLQGACGSCPSST T+ MGIE L
Sbjct: 76 LTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIETRL 135
Query: 137 KEKFGDAIKDIRQVYDEE 154
++K + I ++ Q+ D E
Sbjct: 136 RDKIPE-ILEVEQIMDTE 152
Score = 43.1 bits (100), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNI-DVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+L +NV+ VL ++RPYL GG I +V+ ++D VV V+L G + T+ + +
Sbjct: 155 LELNEENVEKVLSEIRPYLAGTGGGILEVIEIKDYVVKVRLSGPA----AGVMTVRVALT 210
Query: 134 RVLKEKF 140
+ L+EK
Sbjct: 211 QKLREKI 217
>gi|225446006|ref|XP_002268218.1| PREDICTED: nifU-like protein 3, chloroplastic [Vitis vinifera]
gi|297735420|emb|CBI17860.3| unnamed protein product [Vitis vinifera]
Length = 237
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NV+ VL++VRP L+ADGGN+ + ++ VV +KLQGACGSCPSST T+ MGIE L
Sbjct: 85 LTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRL 144
Query: 137 KEKFGDAIKDIRQVYDEE 154
++K + I+ + Q+ D E
Sbjct: 145 RDKIPE-IEAVEQILDTE 161
Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNI-DVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+L +NV+ VL ++RPYL GG + ++V + D V+ V+L G + T+ + +
Sbjct: 164 LELNEENVEKVLAEIRPYLAGTGGGVLELVQINDYVIKVRLSGPA----AGVMTVRVALT 219
Query: 134 RVLKEKF 140
+ L+EK
Sbjct: 220 QKLREKI 226
>gi|374709976|ref|ZP_09714410.1| hypothetical protein SinuC_07103 [Sporolactobacillus inulinus CASD]
Length = 73
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 54/72 (75%), Gaps = 1/72 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
+ V+ VLE +RPYL+ DGG+++++ VEDGVV V+L GACG+CPSST T+ GIER L E
Sbjct: 3 QQVEEVLEKLRPYLLRDGGDVELLEVEDGVVRVRLLGACGNCPSSTLTLKAGIERALIEN 62
Query: 140 FGDAIKDIRQVY 151
IK++ QV+
Sbjct: 63 V-PGIKELEQVF 73
>gi|357449361|ref|XP_003594957.1| NifU-like protein [Medicago truncatula]
gi|355484005|gb|AES65208.1| NifU-like protein [Medicago truncatula]
Length = 242
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NV+ VL++VRP L+ADGGN+ + ++ VV +KLQGACGSCPSST T+ MGIE L
Sbjct: 91 LTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIETRL 150
Query: 137 KEKFGDAIKDIRQVYDEE 154
++K + I ++ Q+ D E
Sbjct: 151 RDKIPE-ILEVEQILDTE 167
Score = 42.7 bits (99), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 75 FDLTAKNVDLVLEDVRPYLIA-DGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+LT NV+ VL ++RPYLI GG +++V + D +V V+L G P++ M +
Sbjct: 170 LELTEDNVESVLSEIRPYLIGTGGGTLELVEINDYIVKVRLSG-----PAAGV---MTVR 221
Query: 134 RVLKEKFGDAIKDIRQV 150
L +K D I I V
Sbjct: 222 VALTQKLRDKIPSIAAV 238
>gi|388500200|gb|AFK38166.1| unknown [Medicago truncatula]
Length = 199
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NV+ VL++VRP L+ADGGN+ + ++ VV +KLQGACGSCPSST T+ MGIE L
Sbjct: 91 LTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIETRL 150
Query: 137 KEKFGDAIKDIRQVYDEE 154
++K + I ++ Q+ D E
Sbjct: 151 RDKIPE-ILEVEQILDTE 167
>gi|288553995|ref|YP_003425930.1| hypothetical protein BpOF4_04870 [Bacillus pseudofirmus OF4]
gi|288545155|gb|ADC49038.1| hypothetical protein with NifU domain [Bacillus pseudofirmus OF4]
Length = 79
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 54/72 (75%), Gaps = 1/72 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
+ V VL+ +RP+L+ DGG++++V VEDG+V V+L GACGSCPSST T+ GIER L E+
Sbjct: 9 EQVQEVLDKLRPFLLRDGGDVELVEVEDGIVKVRLLGACGSCPSSTITLKAGIERALLEE 68
Query: 140 FGDAIKDIRQVY 151
+K+I QV+
Sbjct: 69 V-PGVKEIEQVF 79
>gi|412990927|emb|CCO18299.1| nitrogen-fixing NifU domain protein [Bathycoccus prasinos]
Length = 294
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 57/77 (74%), Gaps = 3/77 (3%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSV--EDGVVSVKLQGACGSCPSSTTTMSMGIER 134
LT + VD LE++RPY+I DGGNI+VV+V EDG+V+V+L GAC SC SS TM G+E
Sbjct: 132 LTKETVDEALEEIRPYVINDGGNIEVVAVSEEDGIVAVRLLGACASCASSQATMKGGVES 191
Query: 135 VLKEKFGD-AIKDIRQV 150
VL++ FG+ A K++ V
Sbjct: 192 VLRKTFGEKAFKEVINV 208
>gi|95929342|ref|ZP_01312085.1| nitrogen-fixing NifU-like [Desulfuromonas acetoxidans DSM 684]
gi|95134458|gb|EAT16114.1| nitrogen-fixing NifU-like [Desulfuromonas acetoxidans DSM 684]
Length = 74
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 56/72 (77%), Gaps = 2/72 (2%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ ++ L++VRP L+ADGGN+++V V +DGVVSVKL GACGSCP ST T+ MGIER+L E
Sbjct: 3 EQIEAALDEVRPTLLADGGNVELVDVSDDGVVSVKLVGACGSCPMSTVTLKMGIERILLE 62
Query: 139 KFGDAIKDIRQV 150
K +K++ QV
Sbjct: 63 KV-PGVKEVVQV 73
>gi|434389342|ref|YP_007099953.1| thioredoxin-like protein [Chamaesiphon minutus PCC 6605]
gi|428020332|gb|AFY96426.1| thioredoxin-like protein [Chamaesiphon minutus PCC 6605]
Length = 80
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
Query: 72 AHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMG 131
+ L NV+ VL+ +RPYL+ADGGN+++V ++ +V ++LQGACGSCPSST T+ MG
Sbjct: 2 SESLTLNPANVETVLDTLRPYLMADGGNVELVDIDGPIVKLRLQGACGSCPSSTMTLKMG 61
Query: 132 IERVLKEKFGDAIKDIRQVY 151
IER L + + I + QV+
Sbjct: 62 IERKLCDMIPE-ISGVEQVF 80
>gi|326534082|dbj|BAJ89391.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Query: 70 YSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMS 129
++ LT +NV+ VL++VRP L+ DGGN+ + ++ VV + LQGACGSCPSST T+
Sbjct: 58 WAVRVLPLTEENVERVLDEVRPSLMRDGGNVALHEIDGLVVVLMLQGACGSCPSSTMTLK 117
Query: 130 MGIERVLKEKFGDAIKDIRQVYDEE 154
MGIE L++K + I ++ Q++D E
Sbjct: 118 MGIESRLRDKIPE-ILEVEQIHDTE 141
Score = 39.3 bits (90), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLIA-DGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+L +NV+ VL+++RPYL GG++D+V ++ VV +++ G + T+ + +
Sbjct: 144 LELNTENVEKVLDEIRPYLSGTGGGSLDLVQIDGFVVKIQISGPA----AGVMTVRVAVT 199
Query: 134 RVLKEKF 140
+ L+EK
Sbjct: 200 QKLREKI 206
>gi|15615981|ref|NP_244286.1| nitrogen fixation protein NifU [Bacillus halodurans C-125]
gi|10176042|dbj|BAB07138.1| nitrogen fixation protein (NifU protein) [Bacillus halodurans
C-125]
Length = 79
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 54/72 (75%), Gaps = 1/72 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
+ V VL+ +RP+L+ DGG++++V VEDG+V V+L GACGSCPSST T+ GIER L E+
Sbjct: 9 EQVKEVLDKLRPFLLRDGGDVELVDVEDGIVKVRLLGACGSCPSSTITLKAGIERALLEE 68
Query: 140 FGDAIKDIRQVY 151
+K+I QV+
Sbjct: 69 V-PGVKEIEQVF 79
>gi|356530300|ref|XP_003533720.1| PREDICTED: nifU-like protein 3, chloroplastic-like isoform 1
[Glycine max]
gi|356530302|ref|XP_003533721.1| PREDICTED: nifU-like protein 3, chloroplastic-like isoform 2
[Glycine max]
Length = 235
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NV+ VL++VRP L+ADGGN+ + ++ VV +KLQGACGSCPSS T+ MGIE L
Sbjct: 84 LTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSAMTLKMGIETRL 143
Query: 137 KEKFGDAIKDIRQVYDEE 154
++K + I ++ Q+ D E
Sbjct: 144 RDKIPE-ILEVEQIMDTE 160
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNI-DVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+LT +NV+ VL ++RPYL+ GG I ++V ++D V V+L G + TT+ + +
Sbjct: 163 LELTEENVENVLSEIRPYLVGTGGGILELVQIKDYTVKVRLSGPA----AGVTTVRVALT 218
Query: 134 RVLKEKF 140
+ L++K
Sbjct: 219 QKLRDKI 225
>gi|317130102|ref|YP_004096384.1| nitrogen-fixing NifU domain-containing protein [Bacillus
cellulosilyticus DSM 2522]
gi|315475050|gb|ADU31653.1| nitrogen-fixing NifU domain protein [Bacillus cellulosilyticus DSM
2522]
Length = 78
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 81 NVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
V VL+ +RP+L+ DGG++++V VEDG+V V+L GACGSCPSST T+ GIER L E+
Sbjct: 9 QVQEVLDKLRPFLLRDGGDVELVDVEDGIVKVRLMGACGSCPSSTITLKAGIERALLEEV 68
Query: 141 GDAIKDIRQVY 151
+K++ QV+
Sbjct: 69 -PGVKELEQVF 78
>gi|118487917|gb|ABK95780.1| unknown [Populus trichocarpa]
Length = 224
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NV+ VL++VRP L+ DGGN+ + ++ VV +KLQGACGSCPSS+ T+ MGIE L
Sbjct: 73 LTEENVEKVLDEVRPGLMRDGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIETKL 132
Query: 137 KEKFGDAIKDIRQVYDEE 154
++K + I D+ Q+ D E
Sbjct: 133 RDKIPE-IMDVEQIMDTE 149
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNI-DVVSVEDGVVSVKLQG 116
+L +NV+ L ++RPYL GG + ++V + D VV V+L G
Sbjct: 152 LELNEENVEKALAEIRPYLAGTGGGVLELVQINDYVVKVRLSG 194
>gi|255582605|ref|XP_002532084.1| Nitrogen fixation protein nifU, putative [Ricinus communis]
gi|223528244|gb|EEF30298.1| Nitrogen fixation protein nifU, putative [Ricinus communis]
Length = 220
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NV+ VL++VRP L+ADGGN+ + ++ VV +KLQGACGSCPSST T+ MGIE L
Sbjct: 69 LTEENVEKVLDEVRPGLMADGGNVVLHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRL 128
Query: 137 KEKFGDAIKDIRQVYDEE 154
++K + I + Q+ D E
Sbjct: 129 RDKIPE-IMAVEQILDTE 145
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNI-DVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+L +NV+ VL ++RPYL GG + ++V ++D +V V+L G P++ M +
Sbjct: 148 LELNDENVEKVLAEIRPYLAGTGGGVLELVQIDDYIVKVRLSG-----PAAGV---MTVR 199
Query: 134 RVLKEKFGDAIKDIRQV 150
L +K D I I V
Sbjct: 200 VALTQKLRDKIPAIAAV 216
>gi|356556204|ref|XP_003546416.1| PREDICTED: nifU-like protein 3, chloroplastic-like [Glycine max]
Length = 236
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NV+ VL++VRP L+ADGGN+ + ++ VV +KLQGACGSCPSS T+ MGIE L
Sbjct: 85 LTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSAMTLKMGIETRL 144
Query: 137 KEKFGDAIKDIRQVYDEE 154
++K + I ++ Q+ D E
Sbjct: 145 RDKIPE-ILEVEQIMDTE 161
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNI-DVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+LT +NV+ VL ++RPYL+ GG I ++V ++D VV V+L G + TT+ + +
Sbjct: 164 LELTEENVENVLSEIRPYLVGTGGGILELVQIKDYVVKVRLSGPA----AGVTTVRVALT 219
Query: 134 RVLKEKF 140
+ L++K
Sbjct: 220 QKLRDKI 226
>gi|224126131|ref|XP_002329668.1| predicted protein [Populus trichocarpa]
gi|222870549|gb|EEF07680.1| predicted protein [Populus trichocarpa]
Length = 149
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
LT +NV+ VL++VRP L+ DGGN+ + ++ VV +KLQGACGSCPSS+ T+ MGIE
Sbjct: 5 LPLTEENVEKVLDEVRPGLMRDGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIET 64
Query: 135 VLKEKFGDAIKDIRQVYDEE 154
L++K + I D+ Q+ D E
Sbjct: 65 KLRDKIPE-IMDVEQIMDTE 83
Score = 36.2 bits (82), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNI-DVVSVEDGVVSVKLQG 116
+L +NV+ L ++RPYL GG + ++V + D VV V+L G
Sbjct: 86 LELNEENVEKALAEIRPYLAGTGGGVLELVQINDYVVKVRLSG 128
>gi|224126127|ref|XP_002329667.1| predicted protein [Populus trichocarpa]
gi|222870548|gb|EEF07679.1| predicted protein [Populus trichocarpa]
Length = 167
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
LT +NV+ VL++VRP L+ DGGN+ + ++ VV +KLQGACGSCPSS+ T+ MGIE
Sbjct: 14 LPLTEENVEKVLDEVRPGLMRDGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIET 73
Query: 135 VLKEKFGDAIKDIRQVYDEE 154
L++K + I D+ Q+ D E
Sbjct: 74 KLRDKIPE-IMDVEQIMDTE 92
Score = 36.2 bits (82), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNI-DVVSVEDGVVSVKLQG 116
+L +NV+ L ++RPYL GG + ++V + D VV V+L G
Sbjct: 95 LELNEENVEKALAEIRPYLAGTGGGVLELVQINDYVVKVRLSG 137
>gi|56964703|ref|YP_176434.1| nitrogen fixation protein [Bacillus clausii KSM-K16]
gi|56910946|dbj|BAD65473.1| nitrogen fixation protein [Bacillus clausii KSM-K16]
Length = 79
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
+ V VL+ +RP+L+ DGG+++++ VEDGVV V+L GACGSCPSST T+ GIER L E+
Sbjct: 9 EQVQEVLDKLRPFLLRDGGDVELIDVEDGVVKVRLLGACGSCPSSTITLKAGIERALLEE 68
Query: 140 FGDAIKDIRQVY 151
I +I QV+
Sbjct: 69 V-PGITEIEQVF 79
>gi|302766397|ref|XP_002966619.1| hypothetical protein SELMODRAFT_230831 [Selaginella moellendorffii]
gi|300166039|gb|EFJ32646.1| hypothetical protein SELMODRAFT_230831 [Selaginella moellendorffii]
Length = 144
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDA 143
+VL++VRPYL++DGGN+ + ++ VV +KLQGACGSCPSS TM MGIE LKEK +
Sbjct: 1 MVLDEVRPYLMSDGGNVALEEIDGLVVKLKLQGACGSCPSSLMTMKMGIEARLKEKIPEI 60
Query: 144 IKDIRQVYDEE 154
I + QV D E
Sbjct: 61 I-GVEQVQDTE 70
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 75 FDLTAKNVDLVLEDVRPYLIA-DGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+LT +NVD +L ++RPYL+ GG + +V ++ VV ++++G + T+ + +
Sbjct: 73 LELTEENVDKILSEIRPYLVGTGGGELTLVKIDGPVVKIRIEGPA----AGVMTVRVAVT 128
Query: 134 RVLKEKF 140
+ L+EK
Sbjct: 129 QKLREKI 135
>gi|433546960|ref|ZP_20503251.1| iron-sulfur cluster assembly protein [Brevibacillus agri BAB-2500]
gi|432181747|gb|ELK39357.1| iron-sulfur cluster assembly protein [Brevibacillus agri BAB-2500]
Length = 73
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 81 NVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
V VL+ +RPYL DGG++ +V VEDG+V ++L GACGSCPSST T+ GIER L E+
Sbjct: 4 QVQEVLDKLRPYLQRDGGDVQLVDVEDGIVKLRLMGACGSCPSSTITLKAGIERALVEEI 63
Query: 141 GDAIKDIRQVY 151
IK+++QV+
Sbjct: 64 -PGIKEVQQVF 73
>gi|226314372|ref|YP_002774268.1| iron-sulfur cluster assembly protein [Brevibacillus brevis NBRC
100599]
gi|226097322|dbj|BAH45764.1| putative iron-sulfur cluster assembly protein [Brevibacillus brevis
NBRC 100599]
Length = 89
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 81 NVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
V VL+ +RPYL DGG++ +V VEDG+V ++L GACGSCPSST T+ GIER L E+
Sbjct: 20 QVQEVLDKLRPYLQRDGGDVQLVDVEDGIVKLRLMGACGSCPSSTITLKAGIERALVEEI 79
Query: 141 GDAIKDIRQVY 151
IK+++QV+
Sbjct: 80 -PGIKEVQQVF 89
>gi|399047236|ref|ZP_10739332.1| thioredoxin-like protein [Brevibacillus sp. CF112]
gi|398054843|gb|EJL46949.1| thioredoxin-like protein [Brevibacillus sp. CF112]
Length = 75
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 81 NVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
V VL+ +RPYL DGG++ +V VEDG+V ++L GACGSCPSST T+ GIER L E+
Sbjct: 6 QVQEVLDKLRPYLQRDGGDVQLVDVEDGIVKLRLMGACGSCPSSTITLKAGIERALVEEI 65
Query: 141 GDAIKDIRQVY 151
IK+++QV+
Sbjct: 66 -PGIKEVQQVF 75
>gi|297583473|ref|YP_003699253.1| nitrogen-fixing NifU domain-containing protein [Bacillus
selenitireducens MLS10]
gi|297141930|gb|ADH98687.1| nitrogen-fixing NifU domain protein [Bacillus selenitireducens
MLS10]
Length = 78
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 81 NVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
V VL+ +RP+L+ DGG++++V VEDGVV V+L GACGSCPSST T+ GIER L E+
Sbjct: 9 QVQEVLDKLRPFLLRDGGDVELVDVEDGVVKVRLMGACGSCPSSTITLKAGIERALLEEV 68
Query: 141 GDAIKDIRQVY 151
+ ++ QV+
Sbjct: 69 -PGVTELEQVF 78
>gi|398812977|ref|ZP_10571683.1| thioredoxin-like protein [Brevibacillus sp. BC25]
gi|398039967|gb|EJL33089.1| thioredoxin-like protein [Brevibacillus sp. BC25]
Length = 75
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 81 NVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
V VL+ +RPYL DGG++ +V VEDG+V ++L GACGSCPSST T+ GIER L E+
Sbjct: 6 QVQEVLDKLRPYLQRDGGDVQLVDVEDGIVKLRLMGACGSCPSSTITLKAGIERALVEEI 65
Query: 141 GDAIKDIRQVY 151
IK+++QV+
Sbjct: 66 -PGIKEVQQVF 75
>gi|297803520|ref|XP_002869644.1| hypothetical protein ARALYDRAFT_492226 [Arabidopsis lyrata subsp.
lyrata]
gi|297315480|gb|EFH45903.1| hypothetical protein ARALYDRAFT_492226 [Arabidopsis lyrata subsp.
lyrata]
Length = 238
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NV+ VL++VRP L+ADGGN+ + ++ VV +KLQGACGSCPSS+ T+ MGIE L
Sbjct: 86 LTEENVERVLDEVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIESRL 145
Query: 137 KEKFGDAIKDIRQVYDEE 154
++K + I + Q + E
Sbjct: 146 RDKIPE-IMSVEQFLESE 162
Score = 35.8 bits (81), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 9/59 (15%)
Query: 67 PGLYSAHQF--------DLTAKNVDLVLEDVRPYLIA-DGGNIDVVSVEDGVVSVKLQG 116
P + S QF +L +N++ VL ++RPYL GG +++V ++ +V V+L G
Sbjct: 150 PEIMSVEQFLESETGGLELNDENIEKVLSELRPYLSGTGGGGLELVEIDGYIVKVRLSG 208
>gi|163310812|pdb|2JNV|A Chain A, Solution Structure Of C-Terminal Domain Of Nifu-Like
Protein From Oryza Sativa
Length = 91
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LTA NV+ VL+ VRPYL ADGG++ + + VV +KLQGACGSCPSS T+ GIER L
Sbjct: 5 LTAGNVESVLDQVRPYLTADGGDVALHEIAGNVVRLKLQGACGSCPSSLITIKRGIERRL 64
Query: 137 KEKFGDAIKDIRQVYDEE 154
EK D + + V D+E
Sbjct: 65 MEKIPD-VAAVEPVTDKE 81
>gi|18416645|ref|NP_567735.1| NifU-like protein 3 [Arabidopsis thaliana]
gi|75147908|sp|Q84RQ7.1|NIFU3_ARATH RecName: Full=NifU-like protein 3, chloroplastic; Short=AtCNfu3;
Short=AtCnfU-IVa; Flags: Precursor
gi|28207820|emb|CAD55560.1| NFU3 protein [Arabidopsis thaliana]
gi|88196759|gb|ABD43022.1| At4g25910 [Arabidopsis thaliana]
gi|222423670|dbj|BAH19802.1| AT4G25910 [Arabidopsis thaliana]
gi|332659732|gb|AEE85132.1| NifU-like protein 3 [Arabidopsis thaliana]
Length = 236
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NV+ VL++VRP L+ADGGN+ + ++ VV +KLQGACGSCPSS+ T+ MGIE L
Sbjct: 84 LTEENVERVLDEVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIESRL 143
Query: 137 KEKFGDAIKDIRQVYDEE 154
++K + I + Q + E
Sbjct: 144 RDKIPE-IMSVEQFLESE 160
Score = 36.2 bits (82), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 9/59 (15%)
Query: 67 PGLYSAHQF--------DLTAKNVDLVLEDVRPYLIA-DGGNIDVVSVEDGVVSVKLQG 116
P + S QF +L +N++ VL ++RPYL GG +++V ++ VV V+L G
Sbjct: 148 PEIMSVEQFLESETGGLELNDENIEKVLSELRPYLSGTGGGGLELVEIDGYVVKVRLTG 206
>gi|224001364|ref|XP_002290354.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973776|gb|EED92106.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 69
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 49/64 (76%), Gaps = 2/64 (3%)
Query: 89 VRPYLIADGGNIDVVSVEDGV--VSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKD 146
VRPYLI+DGGN+ V +V+ G V + L+GACGSC SST TM MGIERVLKEKF D + +
Sbjct: 1 VRPYLISDGGNVSVQNVDAGTGNVYLLLEGACGSCASSTVTMKMGIERVLKEKFEDKLGE 60
Query: 147 IRQV 150
+ QV
Sbjct: 61 VIQV 64
>gi|4538920|emb|CAB39656.1| nitrogen fixation like protein [Arabidopsis thaliana]
gi|7269442|emb|CAB79446.1| nitrogen fixation like protein [Arabidopsis thaliana]
Length = 224
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NV+ VL++VRP L+ADGGN+ + ++ VV +KLQGACGSCPSS+ T+ MGIE L
Sbjct: 72 LTEENVERVLDEVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIESRL 131
Query: 137 KEKFGDAIKDIRQVYDEE 154
++K + I + Q + E
Sbjct: 132 RDKIPE-IMSVEQFLESE 148
Score = 36.2 bits (82), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 9/59 (15%)
Query: 67 PGLYSAHQF--------DLTAKNVDLVLEDVRPYLIA-DGGNIDVVSVEDGVVSVKLQG 116
P + S QF +L +N++ VL ++RPYL GG +++V ++ VV V+L G
Sbjct: 136 PEIMSVEQFLESETGGLELNDENIEKVLSELRPYLSGTGGGGLELVEIDGYVVKVRLTG 194
>gi|21554503|gb|AAM63593.1| nitrogen fixation like protein [Arabidopsis thaliana]
Length = 236
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NV+ VL++VRP L+ADGGN+ + ++ VV +KLQGACGSCPSS+ T+ MGIE L
Sbjct: 84 LTEENVERVLDEVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIESRL 143
Query: 137 KEKFGDAIKDIRQVYDEE 154
++K + I + Q + E
Sbjct: 144 RDKIPE-IMSVEQFLESE 160
Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 9/59 (15%)
Query: 67 PGLYSAHQF--------DLTAKNVDLVLEDVRPYLIA-DGGNIDVVSVEDGVVSVKLQG 116
P + S QF +L +N++ VL ++RPYL GG +++V ++ VV V+L G
Sbjct: 148 PEIMSVEQFLESETGGLELNDENIEKVLSELRPYLSGTGGGGLELVEIDGYVVKVRLTG 206
>gi|261409236|ref|YP_003245477.1| nitrogen-fixing NifU domain-containing protein [Paenibacillus sp.
Y412MC10]
gi|315649387|ref|ZP_07902475.1| nitrogen-fixing NifU domain protein [Paenibacillus vortex V453]
gi|329926903|ref|ZP_08281306.1| NifU-like protein [Paenibacillus sp. HGF5]
gi|261285699|gb|ACX67670.1| nitrogen-fixing NifU domain protein [Paenibacillus sp. Y412MC10]
gi|315275163|gb|EFU38533.1| nitrogen-fixing NifU domain protein [Paenibacillus vortex V453]
gi|328938890|gb|EGG35263.1| NifU-like protein [Paenibacillus sp. HGF5]
Length = 81
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Query: 85 VLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
VL+ +RP+L DGG++++V VEDG+V +KL GACGSCPSST T+ GIER L E+ + I
Sbjct: 16 VLDKLRPFLQRDGGDVELVDVEDGIVKLKLMGACGSCPSSTITLKAGIERALVEEV-EGI 74
Query: 145 KDIRQVY 151
+++ QV+
Sbjct: 75 QEVVQVF 81
>gi|375310171|ref|ZP_09775447.1| nitrogen-fixing NifU domain-containing protein [Paenibacillus sp.
Aloe-11]
gi|375077764|gb|EHS55996.1| nitrogen-fixing NifU domain-containing protein [Paenibacillus sp.
Aloe-11]
Length = 81
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Query: 85 VLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
VL+ +RP+L DGG++++V VEDG+V +KL GACGSCPSST T+ GIER L E+ D +
Sbjct: 16 VLDKLRPFLQRDGGDVELVDVEDGIVKLKLVGACGSCPSSTITLKAGIERALLEEV-DGV 74
Query: 145 KDIRQVY 151
+++ QV+
Sbjct: 75 QEVVQVF 81
>gi|308070638|ref|YP_003872243.1| thioredoxin-like protein [Paenibacillus polymyxa E681]
gi|374320176|ref|YP_005073305.1| thioredoxin-like protein [Paenibacillus terrae HPL-003]
gi|305859917|gb|ADM71705.1| Thioredoxin-like protein [Paenibacillus polymyxa E681]
gi|357199185|gb|AET57082.1| thioredoxin-like protein [Paenibacillus terrae HPL-003]
Length = 81
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Query: 85 VLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
VL+ +RP+L DGG++++V VEDG+V +KL GACGSCPSST T+ GIER L E+ D +
Sbjct: 16 VLDKLRPFLQRDGGDVELVDVEDGIVKLKLVGACGSCPSSTITLKAGIERALLEEV-DGV 74
Query: 145 KDIRQVY 151
+++ QV+
Sbjct: 75 QEVVQVF 81
>gi|354584833|ref|ZP_09003725.1| nitrogen-fixing NifU domain protein [Paenibacillus lactis 154]
gi|353191384|gb|EHB56891.1| nitrogen-fixing NifU domain protein [Paenibacillus lactis 154]
Length = 81
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Query: 85 VLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
VL+ +RP+L DGG++++V VEDG+V +KL GACGSCPSST T+ GIER L E+ + I
Sbjct: 16 VLDKLRPFLQRDGGDVELVDVEDGIVKLKLMGACGSCPSSTITLKAGIERALVEEV-EGI 74
Query: 145 KDIRQVY 151
+++ QV+
Sbjct: 75 QEVVQVF 81
>gi|390454330|ref|ZP_10239858.1| thioredoxin-like protein [Paenibacillus peoriae KCTC 3763]
Length = 73
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Query: 85 VLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
VL+ +RP+L DGG++++V VEDG+V +KL GACGSCPSST T+ GIER L E+ D +
Sbjct: 8 VLDKLRPFLQRDGGDVELVDVEDGIVKLKLVGACGSCPSSTITLKAGIERALLEEV-DGV 66
Query: 145 KDIRQVY 151
+++ QV+
Sbjct: 67 QEVVQVF 73
>gi|357009423|ref|ZP_09074422.1| nitrogen-fixing NifU domain-containing protein [Paenibacillus elgii
B69]
Length = 82
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Query: 85 VLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
VL+ +RP+L DGG++++V VEDG+V ++L GACGSCPSST T+ GIER L E+ + +
Sbjct: 17 VLDKLRPFLQRDGGDVELVDVEDGIVKLRLMGACGSCPSSTITLKAGIERALLEEV-EGV 75
Query: 145 KDIRQVY 151
+++ QV+
Sbjct: 76 QEVMQVF 82
>gi|379719077|ref|YP_005311208.1| nitrogen-fixing NifU domain-containing protein [Paenibacillus
mucilaginosus 3016]
gi|386721668|ref|YP_006187993.1| nitrogen-fixing NifU domain-containing protein [Paenibacillus
mucilaginosus K02]
gi|378567749|gb|AFC28059.1| nitrogen-fixing NifU domain-containing protein [Paenibacillus
mucilaginosus 3016]
gi|384088792|gb|AFH60228.1| nitrogen-fixing NifU domain-containing protein [Paenibacillus
mucilaginosus K02]
Length = 84
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Query: 85 VLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
VL+ +RP+L DGG++++V VEDG+V ++L GACGSCPSST T+ GIER L E+ + I
Sbjct: 19 VLDKLRPFLQRDGGDVELVDVEDGIVKLRLVGACGSCPSSTITLKAGIERALLEEV-EGI 77
Query: 145 KDIRQVY 151
+++ QV+
Sbjct: 78 QEVMQVF 84
>gi|430749156|ref|YP_007212064.1| thioredoxin-like protein [Thermobacillus composti KWC4]
gi|430733121|gb|AGA57066.1| thioredoxin-like protein [Thermobacillus composti KWC4]
Length = 81
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Query: 85 VLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
VL+ +RP+L DGG++++V VEDGVV ++L GACGSCPSST T+ GIER L E+ + I
Sbjct: 16 VLDKLRPFLQRDGGDVELVDVEDGVVKLRLMGACGSCPSSTITLKAGIERALLEEV-EGI 74
Query: 145 KDIRQVY 151
+++ QV+
Sbjct: 75 QEVIQVF 81
>gi|337747979|ref|YP_004642141.1| nitrogen-fixing NifU domain-containing protein [Paenibacillus
mucilaginosus KNP414]
gi|336299168|gb|AEI42271.1| nitrogen-fixing NifU domain protein [Paenibacillus mucilaginosus
KNP414]
Length = 82
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Query: 85 VLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
VL+ +RP+L DGG++++V VEDG+V ++L GACGSCPSST T+ GIER L E+ + I
Sbjct: 17 VLDKLRPFLQRDGGDVELVDVEDGIVKLRLVGACGSCPSSTITLKAGIERALLEEV-EGI 75
Query: 145 KDIRQVY 151
+++ QV+
Sbjct: 76 QEVMQVF 82
>gi|392957154|ref|ZP_10322679.1| nitrogen fixation protein NifU [Bacillus macauensis ZFHKF-1]
gi|391877056|gb|EIT85651.1| nitrogen fixation protein NifU [Bacillus macauensis ZFHKF-1]
Length = 79
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 54/72 (75%), Gaps = 1/72 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
+ V+ VL+ +RP+L+ DGG++++V +E+G+V V+L GACGSCPSST T+ GIER L E+
Sbjct: 9 EQVEEVLDKLRPFLLRDGGDVELVDIEEGIVKVRLMGACGSCPSSTITLKAGIERALLEE 68
Query: 140 FGDAIKDIRQVY 151
+ ++ QV+
Sbjct: 69 V-PGVVELEQVF 79
>gi|110738975|dbj|BAF01408.1| nitrogen fixation like protein [Arabidopsis thaliana]
gi|227206276|dbj|BAH57193.1| AT4G25910 [Arabidopsis thaliana]
Length = 155
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NV+ VL++VRP L+ADGGN+ + ++ VV +KLQGACGSCPSS+ T+ MGIE L
Sbjct: 3 LTEENVERVLDEVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIESRL 62
Query: 137 KEKFGDAIKDIRQVYDEE 154
++K + I + Q + E
Sbjct: 63 RDKIPE-IMSVEQFLESE 79
>gi|152977236|ref|YP_001376753.1| NifU domain-containing protein [Bacillus cytotoxicus NVH 391-98]
gi|152025988|gb|ABS23758.1| nitrogen-fixing NifU domain protein [Bacillus cytotoxicus NVH
391-98]
Length = 78
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Query: 85 VLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
VL+ +RP+L+ DGG++++V +EDG+V ++L GACGSCPSST T+ GIER L E+ I
Sbjct: 13 VLDKLRPFLLRDGGDVELVDIEDGIVKLRLMGACGSCPSSTITLKAGIERALLEEVPGVI 72
Query: 145 KDIRQVY 151
++ QV+
Sbjct: 73 -EVEQVF 78
>gi|335039700|ref|ZP_08532851.1| nitrogen-fixing NifU domain-containing protein [Caldalkalibacillus
thermarum TA2.A1]
gi|334180403|gb|EGL83017.1| nitrogen-fixing NifU domain-containing protein [Caldalkalibacillus
thermarum TA2.A1]
Length = 75
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
+L A+ V VL+ +RP+L DGG+ ++V+VEDGVV ++L GACGSCP+ST T+ GIER
Sbjct: 1 MELEAR-VQEVLDKLRPFLQRDGGDCELVAVEDGVVKLRLLGACGSCPASTMTLKAGIER 59
Query: 135 VLKEKFGDAIKDIRQVY 151
L E+ + IK++ QV
Sbjct: 60 ALMEEIPE-IKEVEQVL 75
>gi|374602839|ref|ZP_09675827.1| nitrogen-fixing NifU domain-containing protein [Paenibacillus
dendritiformis C454]
gi|374391598|gb|EHQ62932.1| nitrogen-fixing NifU domain-containing protein [Paenibacillus
dendritiformis C454]
Length = 81
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Query: 85 VLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
VL+ +RP+L DGG++++V VEDG+V ++L GACGSCPSST T+ GIER L E+ + I
Sbjct: 16 VLDKLRPFLQRDGGDVELVDVEDGIVKLRLMGACGSCPSSTITLKAGIERALVEEV-EGI 74
Query: 145 KDIRQVY 151
++ QV+
Sbjct: 75 TEVVQVF 81
>gi|421859298|ref|ZP_16291533.1| thioredoxin-like protein [Paenibacillus popilliae ATCC 14706]
gi|410831182|dbj|GAC41970.1| thioredoxin-like protein [Paenibacillus popilliae ATCC 14706]
Length = 81
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Query: 85 VLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
VL+ +RP+L DGG++++V VEDG+V ++L GACGSCPSST T+ GIER L E+ + I
Sbjct: 16 VLDKLRPFLQRDGGDVELVDVEDGIVKLRLMGACGSCPSSTITLKAGIERALVEEV-EGI 74
Query: 145 KDIRQVY 151
++ QV+
Sbjct: 75 TEVVQVF 81
>gi|402817925|ref|ZP_10867511.1| NifU-like protein [Paenibacillus alvei DSM 29]
gi|402504437|gb|EJW14966.1| NifU-like protein [Paenibacillus alvei DSM 29]
Length = 81
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Query: 85 VLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
VL+ +RP+L DGG++++V VEDG+V ++L GACGSCPSST T+ GIER L E+ + I
Sbjct: 16 VLDKLRPFLQRDGGDVELVDVEDGIVKLRLMGACGSCPSSTITLKAGIERALVEEV-EGI 74
Query: 145 KDIRQVY 151
++ QV+
Sbjct: 75 TEVVQVF 81
>gi|70727016|ref|YP_253930.1| nitrogen fixation protein NifU [Staphylococcus haemolyticus
JCSC1435]
gi|223043066|ref|ZP_03613114.1| nitrogen fixation protein NifU [Staphylococcus capitis SK14]
gi|228474235|ref|ZP_04058970.1| nitrogen fixation protein NifU [Staphylococcus hominis SK119]
gi|239636541|ref|ZP_04677543.1| nitrogen fixation protein NifU [Staphylococcus warneri L37603]
gi|242373103|ref|ZP_04818677.1| nitrogen fixation protein NifU [Staphylococcus epidermidis
M23864:W1]
gi|289551248|ref|YP_003472152.1| nitrogen-fixing NifU domain protein [Staphylococcus lugdunensis
HKU09-01]
gi|314933148|ref|ZP_07840513.1| NifU domain protein [Staphylococcus caprae C87]
gi|314936844|ref|ZP_07844191.1| NifU domain protein [Staphylococcus hominis subsp. hominis C80]
gi|315658750|ref|ZP_07911619.1| NifU domain protein [Staphylococcus lugdunensis M23590]
gi|385784864|ref|YP_005761037.1| hypothetical protein SLUG_19290 [Staphylococcus lugdunensis
N920143]
gi|417644323|ref|ZP_12294324.1| NifU-like protein [Staphylococcus warneri VCU121]
gi|417907504|ref|ZP_12551276.1| NifU-like protein [Staphylococcus capitis VCU116]
gi|418414543|ref|ZP_12987758.1| hypothetical protein HMPREF9308_00923 [Staphylococcus lugdunensis
ACS-027-V-Sch2]
gi|418619382|ref|ZP_13182210.1| NifU-like protein [Staphylococcus hominis VCU122]
gi|418636078|ref|ZP_13198432.1| NifU-like protein [Staphylococcus lugdunensis VCU139]
gi|445060165|ref|YP_007385569.1| hypothetical protein A284_09050 [Staphylococcus warneri SG1]
gi|68447740|dbj|BAE05324.1| nitrogen fixation protein NifU [Staphylococcus haemolyticus
JCSC1435]
gi|222443920|gb|EEE50017.1| nitrogen fixation protein NifU [Staphylococcus capitis SK14]
gi|228271594|gb|EEK12941.1| nitrogen fixation protein NifU [Staphylococcus hominis SK119]
gi|239597896|gb|EEQ80391.1| nitrogen fixation protein NifU [Staphylococcus warneri L37603]
gi|242349257|gb|EES40858.1| nitrogen fixation protein NifU [Staphylococcus epidermidis
M23864:W1]
gi|289180780|gb|ADC88025.1| nitrogen-fixing NifU domain protein [Staphylococcus lugdunensis
HKU09-01]
gi|313653298|gb|EFS17055.1| NifU domain protein [Staphylococcus caprae C87]
gi|313655463|gb|EFS19208.1| NifU domain protein [Staphylococcus hominis subsp. hominis C80]
gi|315496205|gb|EFU84531.1| NifU domain protein [Staphylococcus lugdunensis M23590]
gi|330684919|gb|EGG96601.1| NifU-like protein [Staphylococcus epidermidis VCU121]
gi|339895120|emb|CCB54437.1| conserved hypothetical protein [Staphylococcus lugdunensis N920143]
gi|341596090|gb|EGS38721.1| NifU-like protein [Staphylococcus capitis VCU116]
gi|374824428|gb|EHR88386.1| NifU-like protein [Staphylococcus hominis VCU122]
gi|374841237|gb|EHS04714.1| NifU-like protein [Staphylococcus lugdunensis VCU139]
gi|410877150|gb|EKS25047.1| hypothetical protein HMPREF9308_00923 [Staphylococcus lugdunensis
ACS-027-V-Sch2]
gi|443426222|gb|AGC91125.1| hypothetical protein A284_09050 [Staphylococcus warneri SG1]
Length = 80
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 55/81 (67%), Gaps = 5/81 (6%)
Query: 71 SAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSM 130
+A FD A+ V+E +RP+L+ DGG+ +V VEDG+V ++L GACG+CPSST T+
Sbjct: 5 NATMFDQVAE----VIERLRPFLLRDGGDCTLVDVEDGIVKLQLHGACGTCPSSTITLKA 60
Query: 131 GIERVLKEKFGDAIKDIRQVY 151
GIER L E+ I ++ QV+
Sbjct: 61 GIERALHEEVPGVI-EVEQVF 80
>gi|172058330|ref|YP_001814790.1| NifU domain-containing protein [Exiguobacterium sibiricum 255-15]
gi|407477998|ref|YP_006791875.1| nitrogen-fixing NifU domain-containing protein [Exiguobacterium
antarcticum B7]
gi|171990851|gb|ACB61773.1| nitrogen-fixing NifU domain protein [Exiguobacterium sibiricum
255-15]
gi|407062077|gb|AFS71267.1| Nitrogen-fixing NifU domain protein [Exiguobacterium antarcticum
B7]
Length = 75
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 45/56 (80%)
Query: 81 NVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
V+ VLE +RP+L+ DGG++++V VEDG+V ++L GACGSCPSST T+ GIER L
Sbjct: 6 QVNEVLEKLRPFLLRDGGDVELVDVEDGIVKLRLMGACGSCPSSTITLKAGIERAL 61
>gi|339007303|ref|ZP_08639878.1| hypothetical protein BRLA_c10660 [Brevibacillus laterosporus LMG
15441]
gi|421872443|ref|ZP_16304061.1| nitrogen fixation protein NifU [Brevibacillus laterosporus GI-9]
gi|338776512|gb|EGP36040.1| hypothetical protein BRLA_c10660 [Brevibacillus laterosporus LMG
15441]
gi|372458416|emb|CCF13610.1| nitrogen fixation protein NifU [Brevibacillus laterosporus GI-9]
Length = 73
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 44/57 (77%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
+ V VLE +RPYL DGG++++V VEDG+V ++L GACGSCPSST T+ GIER L
Sbjct: 3 EQVQEVLEKLRPYLQRDGGDVELVDVEDGIVKLRLMGACGSCPSSTITLKAGIERAL 59
>gi|358053201|ref|ZP_09146977.1| nitrogen-fixing NifU domain protein [Staphylococcus simiae CCM
7213]
gi|404416815|ref|ZP_10998629.1| hypothetical protein SARL_03061 [Staphylococcus arlettae CVD059]
gi|357257326|gb|EHJ07607.1| nitrogen-fixing NifU domain protein [Staphylococcus simiae CCM
7213]
gi|403490823|gb|EJY96354.1| hypothetical protein SARL_03061 [Staphylococcus arlettae CVD059]
Length = 80
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 55/81 (67%), Gaps = 5/81 (6%)
Query: 71 SAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSM 130
+A FD A+ V+E +RP+L+ DGG+ ++ VEDG+V ++L GACG+CPSST T+
Sbjct: 5 NATMFDQVAE----VIERLRPFLLRDGGDCSLIDVEDGIVKLQLHGACGTCPSSTITLKA 60
Query: 131 GIERVLKEKFGDAIKDIRQVY 151
GIER L E+ I ++ QV+
Sbjct: 61 GIERALHEEVPGVI-EVEQVF 80
>gi|347752687|ref|YP_004860252.1| nitrogen-fixing NifU domain-containing protein [Bacillus coagulans
36D1]
gi|347585205|gb|AEP01472.1| nitrogen-fixing NifU domain-containing protein [Bacillus coagulans
36D1]
Length = 78
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
D + V VL+ +RP+L+ DGG+ +++ VEDG+V ++L GACGSCPSST T+ GIER
Sbjct: 4 DTITEQVQEVLDKLRPFLLRDGGDCELIDVEDGIVKLRLLGACGSCPSSTITLKAGIERA 63
Query: 136 LKEKFGDAIKDIRQVY 151
L E+ + ++ QV+
Sbjct: 64 LFEEV-PGVMEVEQVF 78
>gi|433461579|ref|ZP_20419187.1| hypothetical protein D479_08361 [Halobacillus sp. BAB-2008]
gi|432189911|gb|ELK46967.1| hypothetical protein D479_08361 [Halobacillus sp. BAB-2008]
Length = 73
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
+ V VL +RP+L+ DGG++++V VEDG+V ++L GACG+CPSST T+ GIER L ++
Sbjct: 3 EQVQEVLNKLRPFLLRDGGDVELVDVEDGIVRLRLMGACGNCPSSTITLKAGIERALAQE 62
Query: 140 FGDAIKDIRQVY 151
I ++ QV+
Sbjct: 63 I-PGIYEVEQVF 73
>gi|58177342|pdb|1XHJ|A Chain A, Solution Structure Of The Staphylococcus Epidermidis
Protein Se0630. Northest Structural Genomics Consortium
Target Ser8
Length = 88
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 54/79 (68%), Gaps = 5/79 (6%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
FD A+ V+E +RP+L+ DGG+ +V VEDG+V ++L GACG+CPSST T+ GIER
Sbjct: 9 FDQVAE----VIERLRPFLLRDGGDCTLVDVEDGIVKLQLHGACGTCPSSTITLKAGIER 64
Query: 135 VLKEKFGDAIKDIRQVYDE 153
L E+ I ++ QV+ E
Sbjct: 65 ALHEEVPGVI-EVEQVFLE 82
>gi|73663148|ref|YP_301929.1| hypothetical protein SSP1839 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|392971566|ref|ZP_10336960.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
equorum subsp. equorum Mu2]
gi|403047117|ref|ZP_10902585.1| hypothetical protein SOJ_21940 [Staphylococcus sp. OJ82]
gi|418576726|ref|ZP_13140859.1| hypothetical protein SSME_19150 [Staphylococcus saprophyticus
subsp. saprophyticus KACC 16562]
gi|72495663|dbj|BAE18984.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|379324883|gb|EHY92028.1| hypothetical protein SSME_19150 [Staphylococcus saprophyticus
subsp. saprophyticus KACC 16562]
gi|392510453|emb|CCI60246.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
equorum subsp. equorum Mu2]
gi|402762651|gb|EJX16745.1| hypothetical protein SOJ_21940 [Staphylococcus sp. OJ82]
Length = 80
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 53/77 (68%), Gaps = 5/77 (6%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
FD A+ V+E +RP+L+ DGG+ +V VEDG+V ++L GACG+CPSST T+ GIER
Sbjct: 9 FDQVAE----VIEKLRPFLLRDGGDCSLVDVEDGIVKLQLHGACGTCPSSTITLKAGIER 64
Query: 135 VLKEKFGDAIKDIRQVY 151
L E+ I ++ QV+
Sbjct: 65 ALHEEVPGVI-EVEQVF 80
>gi|52081716|ref|YP_080507.1| hypothetical protein BL02118 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|319647633|ref|ZP_08001851.1| nitrogen fixation protein [Bacillus sp. BT1B_CT2]
gi|404490599|ref|YP_006714705.1| iron-sulfur scaffold protein YutI [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|423683712|ref|ZP_17658551.1| hypothetical protein MUY_03565 [Bacillus licheniformis WX-02]
gi|52004927|gb|AAU24869.1| Conserved protein YutI [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52349604|gb|AAU42238.1| putative iron-sulfur scaffold protein YutI [Bacillus licheniformis
DSM 13 = ATCC 14580]
gi|317389974|gb|EFV70783.1| nitrogen fixation protein [Bacillus sp. BT1B_CT2]
gi|383440486|gb|EID48261.1| hypothetical protein MUY_03565 [Bacillus licheniformis WX-02]
Length = 79
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
+ V VL+ +RP+L+ DGG+ ++V VEDG+V ++L GACGSCPSST T+ GIER L E+
Sbjct: 9 EQVQEVLDKLRPFLLRDGGDCELVDVEDGIVKLRLLGACGSCPSSTITLKAGIERALLEE 68
Query: 140 FGDAIKDIRQVY 151
I ++ QV+
Sbjct: 69 VPGVI-EVEQVF 79
>gi|452973206|gb|EME73028.1| iron-sulfur scaffold protein YutI [Bacillus sonorensis L12]
Length = 79
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
+ V VL+ +RP+L+ DGG+ ++V VEDG+V ++L GACGSCPSST T+ GIER L E+
Sbjct: 9 EQVQEVLDKLRPFLLRDGGDCELVDVEDGIVKLRLLGACGSCPSSTITLKAGIERALLEE 68
Query: 140 FGDAIKDIRQVY 151
I ++ QV+
Sbjct: 69 VPGVI-EVEQVF 79
>gi|404497924|ref|YP_006722030.1| thioredoxin/NifU-like domain-containing protein [Geobacter
metallireducens GS-15]
gi|418067008|ref|ZP_12704362.1| nitrogen-fixing NifU domain protein [Geobacter metallireducens
RCH3]
gi|78195527|gb|ABB33294.1| thioredoxin/NifU-like domain protein [Geobacter metallireducens
GS-15]
gi|373559579|gb|EHP85872.1| nitrogen-fixing NifU domain protein [Geobacter metallireducens
RCH3]
Length = 74
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V VL+ VRP L ADGG++++V V EDGVV VKL GACG CP ST T+ MGIER LKE
Sbjct: 3 EEVKKVLDTVRPALQADGGDVELVEVTEDGVVKVKLVGACGHCPMSTMTLKMGIERTLKE 62
Query: 139 KF 140
K
Sbjct: 63 KV 64
>gi|126652035|ref|ZP_01724224.1| nitrogen fixation protein (NifU protein) [Bacillus sp. B14905]
gi|169826170|ref|YP_001696328.1| NifU-like protein [Lysinibacillus sphaericus C3-41]
gi|299536342|ref|ZP_07049655.1| NifU-like protein [Lysinibacillus fusiformis ZC1]
gi|424738370|ref|ZP_18166808.1| nitrogen fixation protein (NifU protein) [Lysinibacillus fusiformis
ZB2]
gi|126591125|gb|EAZ85235.1| nitrogen fixation protein (NifU protein) [Bacillus sp. B14905]
gi|168990658|gb|ACA38198.1| NifU-like protein [Lysinibacillus sphaericus C3-41]
gi|298728328|gb|EFI68890.1| NifU-like protein [Lysinibacillus fusiformis ZC1]
gi|422947575|gb|EKU41967.1| nitrogen fixation protein (NifU protein) [Lysinibacillus fusiformis
ZB2]
Length = 78
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Query: 85 VLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
VL+ +RP+L+ DGG+ ++V VEDGVV ++L GACGSCPSST T+ GIER L E+ I
Sbjct: 13 VLDKLRPFLLRDGGDCELVDVEDGVVKLRLLGACGSCPSSTITLKAGIERALLEEV-PGI 71
Query: 145 KDIRQVY 151
++ QV+
Sbjct: 72 VEVEQVF 78
>gi|229032593|ref|ZP_04188558.1| hypothetical protein bcere0028_46300 [Bacillus cereus AH1271]
gi|229135778|ref|ZP_04264548.1| hypothetical protein bcere0014_46610 [Bacillus cereus BDRD-ST196]
gi|423400200|ref|ZP_17377373.1| hypothetical protein ICW_00598 [Bacillus cereus BAG2X1-2]
gi|423462241|ref|ZP_17439037.1| hypothetical protein IEI_05380 [Bacillus cereus BAG5X2-1]
gi|423479106|ref|ZP_17455821.1| hypothetical protein IEO_04564 [Bacillus cereus BAG6X1-1]
gi|423673287|ref|ZP_17648226.1| hypothetical protein IKS_00830 [Bacillus cereus VDM062]
gi|228647644|gb|EEL03709.1| hypothetical protein bcere0014_46610 [Bacillus cereus BDRD-ST196]
gi|228728778|gb|EEL79789.1| hypothetical protein bcere0028_46300 [Bacillus cereus AH1271]
gi|401133512|gb|EJQ41141.1| hypothetical protein IEI_05380 [Bacillus cereus BAG5X2-1]
gi|401310915|gb|EJS16224.1| hypothetical protein IKS_00830 [Bacillus cereus VDM062]
gi|401655949|gb|EJS73474.1| hypothetical protein ICW_00598 [Bacillus cereus BAG2X1-2]
gi|402425978|gb|EJV58118.1| hypothetical protein IEO_04564 [Bacillus cereus BAG6X1-1]
Length = 78
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Query: 85 VLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
VL+ +RP+L+ DGG++++V +E+G+V ++L GACGSCPSST T+ GIER L E+ I
Sbjct: 13 VLDKLRPFLLRDGGDVELVDIEEGIVKLRLMGACGSCPSSTITLKAGIERALLEEVPGVI 72
Query: 145 KDIRQVY 151
++ QV+
Sbjct: 73 -EVEQVF 78
>gi|312109659|ref|YP_003987975.1| nitrogen-fixing NifU domain-containing protein [Geobacillus sp.
Y4.1MC1]
gi|336234077|ref|YP_004586693.1| nitrogen-fixing NifU domain-containing protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|423718775|ref|ZP_17692957.1| nifU-like domain protein [Geobacillus thermoglucosidans TNO-09.020]
gi|311214760|gb|ADP73364.1| nitrogen-fixing NifU domain protein [Geobacillus sp. Y4.1MC1]
gi|335360932|gb|AEH46612.1| nitrogen-fixing NifU domain-containing protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|383368377|gb|EID45650.1| nifU-like domain protein [Geobacillus thermoglucosidans TNO-09.020]
Length = 78
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
+ V VL+ +RP+L+ DGG+ +++ VEDGVV ++L GACGSCPSST T+ GIER L E+
Sbjct: 8 EQVQEVLDKLRPFLLRDGGDCELIDVEDGVVKLRLLGACGSCPSSTITLKAGIERALLEE 67
Query: 140 FGDAIKDIRQVY 151
I ++ QV+
Sbjct: 68 V-PGIVEVEQVF 78
>gi|30022992|ref|NP_834623.1| NifU protein [Bacillus cereus ATCC 14579]
gi|30264992|ref|NP_847369.1| NifU domain-containing protein [Bacillus anthracis str. Ames]
gi|42784132|ref|NP_981379.1| NifU domain-containing protein [Bacillus cereus ATCC 10987]
gi|47530492|ref|YP_021841.1| NifU domain-containing protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|47566983|ref|ZP_00237700.1| NifU protein-related protein [Bacillus cereus G9241]
gi|49187811|ref|YP_031064.1| NifU domain-containing protein [Bacillus anthracis str. Sterne]
gi|49481022|ref|YP_038969.1| NifU domain-containing protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52140580|ref|YP_086250.1| NifU domain-containing protein [Bacillus cereus E33L]
gi|75758910|ref|ZP_00739021.1| NifU protein [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|118480036|ref|YP_897187.1| NifU-like domain-containing protein [Bacillus thuringiensis str. Al
Hakam]
gi|163942665|ref|YP_001647549.1| NifU domain-containing protein [Bacillus weihenstephanensis KBAB4]
gi|165870953|ref|ZP_02215605.1| nifU domain protein [Bacillus anthracis str. A0488]
gi|167634861|ref|ZP_02393179.1| nifU domain protein [Bacillus anthracis str. A0442]
gi|167639907|ref|ZP_02398175.1| nifU domain protein [Bacillus anthracis str. A0193]
gi|170685656|ref|ZP_02876879.1| nifU domain protein [Bacillus anthracis str. A0465]
gi|170706993|ref|ZP_02897450.1| nifU domain protein [Bacillus anthracis str. A0389]
gi|177652329|ref|ZP_02934832.1| nifU domain protein [Bacillus anthracis str. A0174]
gi|190567150|ref|ZP_03020065.1| nifU domain protein [Bacillus anthracis str. Tsiankovskii-I]
gi|196033148|ref|ZP_03100561.1| nifU domain protein [Bacillus cereus W]
gi|196040592|ref|ZP_03107892.1| nifU domain protein [Bacillus cereus NVH0597-99]
gi|196043939|ref|ZP_03111176.1| nifU domain protein [Bacillus cereus 03BB108]
gi|206970391|ref|ZP_03231344.1| nifU domain protein [Bacillus cereus AH1134]
gi|206976476|ref|ZP_03237383.1| nifU domain protein [Bacillus cereus H3081.97]
gi|217962417|ref|YP_002340989.1| nifU domain-containing protein [Bacillus cereus AH187]
gi|218235090|ref|YP_002369752.1| nifU domain protein [Bacillus cereus B4264]
gi|218900105|ref|YP_002448516.1| nifU domain protein [Bacillus cereus G9842]
gi|218906144|ref|YP_002453978.1| nifU domain protein [Bacillus cereus AH820]
gi|222098402|ref|YP_002532460.1| nitrogen-fixing nifu domain protein [Bacillus cereus Q1]
gi|225866921|ref|YP_002752299.1| nifU domain protein [Bacillus cereus 03BB102]
gi|227817723|ref|YP_002817732.1| nifU domain protein [Bacillus anthracis str. CDC 684]
gi|228903455|ref|ZP_04067581.1| hypothetical protein bthur0014_46170 [Bacillus thuringiensis IBL
4222]
gi|228910790|ref|ZP_04074599.1| hypothetical protein bthur0013_49320 [Bacillus thuringiensis IBL
200]
gi|228917578|ref|ZP_04081122.1| hypothetical protein bthur0012_47840 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228923687|ref|ZP_04086965.1| hypothetical protein bthur0011_46620 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228929976|ref|ZP_04092987.1| hypothetical protein bthur0010_46580 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228936248|ref|ZP_04099047.1| hypothetical protein bthur0009_46860 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228942118|ref|ZP_04104658.1| hypothetical protein bthur0008_47490 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228948675|ref|ZP_04110953.1| hypothetical protein bthur0007_47990 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228955216|ref|ZP_04117224.1| hypothetical protein bthur0006_45740 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228961200|ref|ZP_04122821.1| hypothetical protein bthur0005_46480 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228968061|ref|ZP_04129067.1| hypothetical protein bthur0004_48450 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228975048|ref|ZP_04135607.1| hypothetical protein bthur0003_47960 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228981687|ref|ZP_04141982.1| hypothetical protein bthur0002_48460 [Bacillus thuringiensis Bt407]
gi|228988194|ref|ZP_04148291.1| hypothetical protein bthur0001_48520 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|229014137|ref|ZP_04171258.1| hypothetical protein bmyco0001_45420 [Bacillus mycoides DSM 2048]
gi|229020189|ref|ZP_04176962.1| hypothetical protein bcere0030_46810 [Bacillus cereus AH1273]
gi|229026415|ref|ZP_04182772.1| hypothetical protein bcere0029_46920 [Bacillus cereus AH1272]
gi|229049643|ref|ZP_04194200.1| hypothetical protein bcere0027_46010 [Bacillus cereus AH676]
gi|229062619|ref|ZP_04199928.1| hypothetical protein bcere0026_46850 [Bacillus cereus AH603]
gi|229072441|ref|ZP_04205643.1| hypothetical protein bcere0025_46020 [Bacillus cereus F65185]
gi|229076327|ref|ZP_04209292.1| hypothetical protein bcere0024_46310 [Bacillus cereus Rock4-18]
gi|229082198|ref|ZP_04214662.1| hypothetical protein bcere0023_48160 [Bacillus cereus Rock4-2]
gi|229094055|ref|ZP_04225139.1| hypothetical protein bcere0021_47700 [Bacillus cereus Rock3-42]
gi|229099409|ref|ZP_04230339.1| hypothetical protein bcere0020_46280 [Bacillus cereus Rock3-29]
gi|229105568|ref|ZP_04236202.1| hypothetical protein bcere0019_46970 [Bacillus cereus Rock3-28]
gi|229112395|ref|ZP_04241933.1| hypothetical protein bcere0018_46350 [Bacillus cereus Rock1-15]
gi|229118422|ref|ZP_04247776.1| hypothetical protein bcere0017_46890 [Bacillus cereus Rock1-3]
gi|229124488|ref|ZP_04253673.1| hypothetical protein bcere0016_47720 [Bacillus cereus 95/8201]
gi|229130213|ref|ZP_04259172.1| hypothetical protein bcere0015_46490 [Bacillus cereus BDRD-Cer4]
gi|229141670|ref|ZP_04270200.1| hypothetical protein bcere0013_47600 [Bacillus cereus BDRD-ST26]
gi|229147497|ref|ZP_04275844.1| hypothetical protein bcere0012_46260 [Bacillus cereus BDRD-ST24]
gi|229153141|ref|ZP_04281320.1| hypothetical protein bcere0011_46710 [Bacillus cereus m1550]
gi|229158547|ref|ZP_04286606.1| hypothetical protein bcere0010_47200 [Bacillus cereus ATCC 4342]
gi|229163931|ref|ZP_04291871.1| hypothetical protein bcere0009_46940 [Bacillus cereus R309803]
gi|229169674|ref|ZP_04297374.1| hypothetical protein bcere0007_46180 [Bacillus cereus AH621]
gi|229175651|ref|ZP_04303159.1| hypothetical protein bcere0006_47280 [Bacillus cereus MM3]
gi|229181250|ref|ZP_04308580.1| hypothetical protein bcere0005_45920 [Bacillus cereus 172560W]
gi|229187187|ref|ZP_04314332.1| hypothetical protein bcere0004_47230 [Bacillus cereus BGSC 6E1]
gi|229193231|ref|ZP_04320182.1| hypothetical protein bcere0002_48780 [Bacillus cereus ATCC 10876]
gi|229199099|ref|ZP_04325782.1| hypothetical protein bcere0001_46120 [Bacillus cereus m1293]
gi|229604077|ref|YP_002869195.1| nifU domain protein [Bacillus anthracis str. A0248]
gi|254687285|ref|ZP_05151142.1| nifU domain protein [Bacillus anthracis str. CNEVA-9066]
gi|254725297|ref|ZP_05187080.1| nifU domain protein [Bacillus anthracis str. A1055]
gi|254735378|ref|ZP_05193086.1| nifU domain protein [Bacillus anthracis str. Western North America
USA6153]
gi|254740645|ref|ZP_05198336.1| nifU domain protein [Bacillus anthracis str. Kruger B]
gi|254753093|ref|ZP_05205129.1| nifU domain protein [Bacillus anthracis str. Vollum]
gi|254761435|ref|ZP_05213456.1| nifU domain protein [Bacillus anthracis str. Australia 94]
gi|296505392|ref|YP_003667092.1| NifU protein [Bacillus thuringiensis BMB171]
gi|301056437|ref|YP_003794648.1| nitrogen-fixing NifU domain-containing protein [Bacillus cereus
biovar anthracis str. CI]
gi|365163077|ref|ZP_09359200.1| hypothetical protein HMPREF1014_04663 [Bacillus sp. 7_6_55CFAA_CT2]
gi|375286942|ref|YP_005107381.1| nifU domain-containing protein [Bacillus cereus NC7401]
gi|376268854|ref|YP_005121566.1| NifU-like domain-containing protein [Bacillus cereus F837/76]
gi|384182798|ref|YP_005568560.1| nitrogen-fixing NifU domain-containing protein [Bacillus
thuringiensis serovar finitimus YBT-020]
gi|384189060|ref|YP_005574956.1| NifU protein [Bacillus thuringiensis serovar chinensis CT-43]
gi|386738824|ref|YP_006212005.1| NifU-like domain-containing protein [Bacillus anthracis str. H9401]
gi|402554939|ref|YP_006596210.1| NifU-like domain-containing protein [Bacillus cereus FRI-35]
gi|402563541|ref|YP_006606265.1| NifU-like domain-containing protein [Bacillus thuringiensis HD-771]
gi|407707451|ref|YP_006831036.1| HTH-type transcriptional regulator lrpB [Bacillus thuringiensis
MC28]
gi|410677392|ref|YP_006929763.1| putative nitrogen fixation protein YutI [Bacillus thuringiensis
Bt407]
gi|421507897|ref|ZP_15954814.1| NifU-like domain-containing protein [Bacillus anthracis str. UR-1]
gi|421640015|ref|ZP_16080603.1| NifU-like domain-containing protein [Bacillus anthracis str. BF1]
gi|423355421|ref|ZP_17333045.1| hypothetical protein IAU_03494 [Bacillus cereus IS075]
gi|423363462|ref|ZP_17340960.1| hypothetical protein IC1_05437 [Bacillus cereus VD022]
gi|423368949|ref|ZP_17346380.1| hypothetical protein IC3_04049 [Bacillus cereus VD142]
gi|423375477|ref|ZP_17352814.1| hypothetical protein IC5_04530 [Bacillus cereus AND1407]
gi|423377219|ref|ZP_17354503.1| hypothetical protein IC9_00572 [Bacillus cereus BAG1O-2]
gi|423386457|ref|ZP_17363712.1| hypothetical protein ICE_04202 [Bacillus cereus BAG1X1-2]
gi|423388748|ref|ZP_17365974.1| hypothetical protein ICG_00596 [Bacillus cereus BAG1X1-3]
gi|423394817|ref|ZP_17372018.1| hypothetical protein ICU_00511 [Bacillus cereus BAG2X1-1]
gi|423405676|ref|ZP_17382825.1| hypothetical protein ICY_00361 [Bacillus cereus BAG2X1-3]
gi|423411269|ref|ZP_17388389.1| hypothetical protein IE1_00573 [Bacillus cereus BAG3O-2]
gi|423417125|ref|ZP_17394214.1| hypothetical protein IE3_00597 [Bacillus cereus BAG3X2-1]
gi|423427073|ref|ZP_17404104.1| hypothetical protein IE5_04762 [Bacillus cereus BAG3X2-2]
gi|423432946|ref|ZP_17409950.1| hypothetical protein IE7_04762 [Bacillus cereus BAG4O-1]
gi|423438368|ref|ZP_17415349.1| hypothetical protein IE9_04549 [Bacillus cereus BAG4X12-1]
gi|423440331|ref|ZP_17417237.1| hypothetical protein IEA_00661 [Bacillus cereus BAG4X2-1]
gi|423449520|ref|ZP_17426399.1| hypothetical protein IEC_04128 [Bacillus cereus BAG5O-1]
gi|423451760|ref|ZP_17428613.1| hypothetical protein IEE_00504 [Bacillus cereus BAG5X1-1]
gi|423463394|ref|ZP_17440162.1| hypothetical protein IEK_00581 [Bacillus cereus BAG6O-1]
gi|423471132|ref|ZP_17447876.1| hypothetical protein IEM_02438 [Bacillus cereus BAG6O-2]
gi|423484980|ref|ZP_17461669.1| hypothetical protein IEQ_04757 [Bacillus cereus BAG6X1-2]
gi|423490108|ref|ZP_17466790.1| hypothetical protein IEU_04731 [Bacillus cereus BtB2-4]
gi|423495832|ref|ZP_17472476.1| hypothetical protein IEW_04730 [Bacillus cereus CER057]
gi|423497374|ref|ZP_17473991.1| hypothetical protein IEY_00601 [Bacillus cereus CER074]
gi|423507546|ref|ZP_17484114.1| hypothetical protein IG1_05088 [Bacillus cereus HD73]
gi|423513581|ref|ZP_17490111.1| hypothetical protein IG3_05077 [Bacillus cereus HuA2-1]
gi|423519630|ref|ZP_17496111.1| hypothetical protein IG7_04700 [Bacillus cereus HuA2-4]
gi|423521178|ref|ZP_17497651.1| hypothetical protein IGC_00561 [Bacillus cereus HuA4-10]
gi|423527214|ref|ZP_17503659.1| hypothetical protein IGE_00766 [Bacillus cereus HuB1-1]
gi|423532747|ref|ZP_17509165.1| hypothetical protein IGI_00579 [Bacillus cereus HuB2-9]
gi|423541990|ref|ZP_17518380.1| hypothetical protein IGK_04081 [Bacillus cereus HuB4-10]
gi|423548223|ref|ZP_17524581.1| hypothetical protein IGO_04658 [Bacillus cereus HuB5-5]
gi|423554578|ref|ZP_17530904.1| hypothetical protein IGW_05208 [Bacillus cereus ISP3191]
gi|423557488|ref|ZP_17533791.1| hypothetical protein II3_02693 [Bacillus cereus MC67]
gi|423566161|ref|ZP_17542436.1| hypothetical protein II5_05564 [Bacillus cereus MSX-A1]
gi|423571842|ref|ZP_17548080.1| hypothetical protein II7_05056 [Bacillus cereus MSX-A12]
gi|423573373|ref|ZP_17549492.1| hypothetical protein II9_00594 [Bacillus cereus MSX-D12]
gi|423583146|ref|ZP_17559257.1| hypothetical protein IIA_04661 [Bacillus cereus VD014]
gi|423588806|ref|ZP_17564892.1| hypothetical protein IIE_04217 [Bacillus cereus VD045]
gi|423595844|ref|ZP_17571874.1| hypothetical protein IIG_04711 [Bacillus cereus VD048]
gi|423597765|ref|ZP_17573765.1| hypothetical protein III_00567 [Bacillus cereus VD078]
gi|423608701|ref|ZP_17584593.1| hypothetical protein IIK_05281 [Bacillus cereus VD102]
gi|423619332|ref|ZP_17595165.1| hypothetical protein IIO_04657 [Bacillus cereus VD115]
gi|423621984|ref|ZP_17597762.1| hypothetical protein IK3_00582 [Bacillus cereus VD148]
gi|423631658|ref|ZP_17607405.1| hypothetical protein IK5_04508 [Bacillus cereus VD154]
gi|423634174|ref|ZP_17609827.1| hypothetical protein IK7_00583 [Bacillus cereus VD156]
gi|423644144|ref|ZP_17619761.1| hypothetical protein IK9_04088 [Bacillus cereus VD166]
gi|423650829|ref|ZP_17626399.1| hypothetical protein IKA_04616 [Bacillus cereus VD169]
gi|423657887|ref|ZP_17633186.1| hypothetical protein IKG_04875 [Bacillus cereus VD200]
gi|423660215|ref|ZP_17635384.1| hypothetical protein IKM_00612 [Bacillus cereus VDM022]
gi|423670511|ref|ZP_17645540.1| hypothetical protein IKO_04208 [Bacillus cereus VDM034]
gi|434378101|ref|YP_006612745.1| NifU-like domain-containing protein [Bacillus thuringiensis HD-789]
gi|449091975|ref|YP_007424416.1| nifU domain protein [Bacillus thuringiensis serovar kurstaki str.
HD73]
gi|452201467|ref|YP_007481548.1| NifU-like domain protein [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|29898552|gb|AAP11824.1| NifU protein [Bacillus cereus ATCC 14579]
gi|30259669|gb|AAP28855.1| nifU domain protein [Bacillus anthracis str. Ames]
gi|42740063|gb|AAS43987.1| nifU domain protein [Bacillus cereus ATCC 10987]
gi|47505640|gb|AAT34316.1| nifU domain protein [Bacillus anthracis str. 'Ames Ancestor']
gi|47556301|gb|EAL14635.1| NifU protein-related protein [Bacillus cereus G9241]
gi|49181738|gb|AAT57114.1| nifU domain protein [Bacillus anthracis str. Sterne]
gi|49332578|gb|AAT63224.1| nitrogen-fixing NifU domain protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|51974049|gb|AAU15599.1| nitrogen-fixing NifU domain protein [Bacillus cereus E33L]
gi|74493584|gb|EAO56689.1| NifU protein [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|118419261|gb|ABK87680.1| NifU-like domain protein [Bacillus thuringiensis str. Al Hakam]
gi|163864862|gb|ABY45921.1| nitrogen-fixing NifU domain protein [Bacillus weihenstephanensis
KBAB4]
gi|164713462|gb|EDR18987.1| nifU domain protein [Bacillus anthracis str. A0488]
gi|167511988|gb|EDR87366.1| nifU domain protein [Bacillus anthracis str. A0193]
gi|167529611|gb|EDR92360.1| nifU domain protein [Bacillus anthracis str. A0442]
gi|170128096|gb|EDS96966.1| nifU domain protein [Bacillus anthracis str. A0389]
gi|170670120|gb|EDT20860.1| nifU domain protein [Bacillus anthracis str. A0465]
gi|172082335|gb|EDT67401.1| nifU domain protein [Bacillus anthracis str. A0174]
gi|190561654|gb|EDV15624.1| nifU domain protein [Bacillus anthracis str. Tsiankovskii-I]
gi|195994577|gb|EDX58532.1| nifU domain protein [Bacillus cereus W]
gi|196025275|gb|EDX63945.1| nifU domain protein [Bacillus cereus 03BB108]
gi|196028724|gb|EDX67331.1| nifU domain protein [Bacillus cereus NVH0597-99]
gi|206734968|gb|EDZ52137.1| nifU domain protein [Bacillus cereus AH1134]
gi|206745400|gb|EDZ56800.1| nifU domain protein [Bacillus cereus H3081.97]
gi|217063374|gb|ACJ77624.1| nifU domain protein [Bacillus cereus AH187]
gi|218163047|gb|ACK63039.1| nifU domain protein [Bacillus cereus B4264]
gi|218538404|gb|ACK90802.1| nifU domain protein [Bacillus cereus AH820]
gi|218541315|gb|ACK93709.1| nifU domain protein [Bacillus cereus G9842]
gi|221242461|gb|ACM15171.1| nitrogen-fixing NifU domain protein [Bacillus cereus Q1]
gi|225790034|gb|ACO30251.1| nifU domain protein [Bacillus cereus 03BB102]
gi|227002453|gb|ACP12196.1| nifU domain protein [Bacillus anthracis str. CDC 684]
gi|228584370|gb|EEK42505.1| hypothetical protein bcere0001_46120 [Bacillus cereus m1293]
gi|228590208|gb|EEK48076.1| hypothetical protein bcere0002_48780 [Bacillus cereus ATCC 10876]
gi|228596197|gb|EEK53872.1| hypothetical protein bcere0004_47230 [Bacillus cereus BGSC 6E1]
gi|228602143|gb|EEK59634.1| hypothetical protein bcere0005_45920 [Bacillus cereus 172560W]
gi|228607792|gb|EEK65106.1| hypothetical protein bcere0006_47280 [Bacillus cereus MM3]
gi|228613713|gb|EEK70838.1| hypothetical protein bcere0007_46180 [Bacillus cereus AH621]
gi|228619552|gb|EEK76438.1| hypothetical protein bcere0009_46940 [Bacillus cereus R309803]
gi|228624861|gb|EEK81629.1| hypothetical protein bcere0010_47200 [Bacillus cereus ATCC 4342]
gi|228630240|gb|EEK86890.1| hypothetical protein bcere0011_46710 [Bacillus cereus m1550]
gi|228635923|gb|EEK92406.1| hypothetical protein bcere0012_46260 [Bacillus cereus BDRD-ST24]
gi|228641738|gb|EEK98039.1| hypothetical protein bcere0013_47600 [Bacillus cereus BDRD-ST26]
gi|228653146|gb|EEL09025.1| hypothetical protein bcere0015_46490 [Bacillus cereus BDRD-Cer4]
gi|228658828|gb|EEL14483.1| hypothetical protein bcere0016_47720 [Bacillus cereus 95/8201]
gi|228664992|gb|EEL20480.1| hypothetical protein bcere0017_46890 [Bacillus cereus Rock1-3]
gi|228671043|gb|EEL26349.1| hypothetical protein bcere0018_46350 [Bacillus cereus Rock1-15]
gi|228677838|gb|EEL32081.1| hypothetical protein bcere0019_46970 [Bacillus cereus Rock3-28]
gi|228684033|gb|EEL37981.1| hypothetical protein bcere0020_46280 [Bacillus cereus Rock3-29]
gi|228689267|gb|EEL43086.1| hypothetical protein bcere0021_47700 [Bacillus cereus Rock3-42]
gi|228701116|gb|EEL53638.1| hypothetical protein bcere0023_48160 [Bacillus cereus Rock4-2]
gi|228706762|gb|EEL58970.1| hypothetical protein bcere0024_46310 [Bacillus cereus Rock4-18]
gi|228710417|gb|EEL62390.1| hypothetical protein bcere0025_46020 [Bacillus cereus F65185]
gi|228716589|gb|EEL68286.1| hypothetical protein bcere0026_46850 [Bacillus cereus AH603]
gi|228722556|gb|EEL73944.1| hypothetical protein bcere0027_46010 [Bacillus cereus AH676]
gi|228734878|gb|EEL85516.1| hypothetical protein bcere0029_46920 [Bacillus cereus AH1272]
gi|228741085|gb|EEL91310.1| hypothetical protein bcere0030_46810 [Bacillus cereus AH1273]
gi|228747091|gb|EEL96973.1| hypothetical protein bmyco0001_45420 [Bacillus mycoides DSM 2048]
gi|228771491|gb|EEM19960.1| hypothetical protein bthur0001_48520 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228777799|gb|EEM26071.1| hypothetical protein bthur0002_48460 [Bacillus thuringiensis Bt407]
gi|228784569|gb|EEM32589.1| hypothetical protein bthur0003_47960 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228791616|gb|EEM39212.1| hypothetical protein bthur0004_48450 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228798494|gb|EEM45486.1| hypothetical protein bthur0005_46480 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228804349|gb|EEM50960.1| hypothetical protein bthur0006_45740 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228810982|gb|EEM57325.1| hypothetical protein bthur0007_47990 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228817452|gb|EEM63537.1| hypothetical protein bthur0008_47490 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228823364|gb|EEM69197.1| hypothetical protein bthur0009_46860 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228829656|gb|EEM75282.1| hypothetical protein bthur0010_46580 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228835816|gb|EEM81179.1| hypothetical protein bthur0011_46620 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228842058|gb|EEM87161.1| hypothetical protein bthur0012_47840 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228848741|gb|EEM93586.1| hypothetical protein bthur0013_49320 [Bacillus thuringiensis IBL
200]
gi|228856185|gb|EEN00719.1| hypothetical protein bthur0014_46170 [Bacillus thuringiensis IBL
4222]
gi|229268485|gb|ACQ50122.1| nifU domain protein [Bacillus anthracis str. A0248]
gi|296326444|gb|ADH09372.1| NifU protein [Bacillus thuringiensis BMB171]
gi|300378606|gb|ADK07510.1| nitrogen-fixing NifU domain protein [Bacillus cereus biovar
anthracis str. CI]
gi|324328882|gb|ADY24142.1| nitrogen-fixing NifU domain-containing protein [Bacillus
thuringiensis serovar finitimus YBT-020]
gi|326942769|gb|AEA18665.1| NifU protein [Bacillus thuringiensis serovar chinensis CT-43]
gi|358355469|dbj|BAL20641.1| nifU domain protein [Bacillus cereus NC7401]
gi|363617362|gb|EHL68761.1| hypothetical protein HMPREF1014_04663 [Bacillus sp. 7_6_55CFAA_CT2]
gi|364514654|gb|AEW58053.1| NifU-like domain protein [Bacillus cereus F837/76]
gi|384388676|gb|AFH86337.1| NifU-like domain protein [Bacillus anthracis str. H9401]
gi|401075281|gb|EJP83664.1| hypothetical protein IC1_05437 [Bacillus cereus VD022]
gi|401079063|gb|EJP87367.1| hypothetical protein IC3_04049 [Bacillus cereus VD142]
gi|401083753|gb|EJP92008.1| hypothetical protein IAU_03494 [Bacillus cereus IS075]
gi|401092163|gb|EJQ00297.1| hypothetical protein IC5_04530 [Bacillus cereus AND1407]
gi|401108285|gb|EJQ16217.1| hypothetical protein IE1_00573 [Bacillus cereus BAG3O-2]
gi|401108543|gb|EJQ16474.1| hypothetical protein IE3_00597 [Bacillus cereus BAG3X2-1]
gi|401109688|gb|EJQ17610.1| hypothetical protein IE5_04762 [Bacillus cereus BAG3X2-2]
gi|401113197|gb|EJQ21067.1| hypothetical protein IE7_04762 [Bacillus cereus BAG4O-1]
gi|401117821|gb|EJQ25656.1| hypothetical protein IE9_04549 [Bacillus cereus BAG4X12-1]
gi|401127801|gb|EJQ35508.1| hypothetical protein IEC_04128 [Bacillus cereus BAG5O-1]
gi|401136380|gb|EJQ43970.1| hypothetical protein IEQ_04757 [Bacillus cereus BAG6X1-2]
gi|401143964|gb|EJQ51497.1| hypothetical protein IEE_00504 [Bacillus cereus BAG5X1-1]
gi|401149668|gb|EJQ57135.1| hypothetical protein IEW_04730 [Bacillus cereus CER057]
gi|401157771|gb|EJQ65167.1| hypothetical protein IG7_04700 [Bacillus cereus HuA2-4]
gi|401163094|gb|EJQ70447.1| hypothetical protein IEY_00601 [Bacillus cereus CER074]
gi|401169327|gb|EJQ76573.1| hypothetical protein IGK_04081 [Bacillus cereus HuB4-10]
gi|401176252|gb|EJQ83448.1| hypothetical protein IGO_04658 [Bacillus cereus HuB5-5]
gi|401179549|gb|EJQ86720.1| hypothetical protein IGC_00561 [Bacillus cereus HuA4-10]
gi|401180874|gb|EJQ88030.1| hypothetical protein IGW_05208 [Bacillus cereus ISP3191]
gi|401192475|gb|EJQ99490.1| hypothetical protein II5_05564 [Bacillus cereus MSX-A1]
gi|401192894|gb|EJQ99902.1| hypothetical protein II3_02693 [Bacillus cereus MC67]
gi|401199437|gb|EJR06339.1| hypothetical protein II7_05056 [Bacillus cereus MSX-A12]
gi|401209206|gb|EJR15965.1| hypothetical protein IIA_04661 [Bacillus cereus VD014]
gi|401214920|gb|EJR21641.1| hypothetical protein II9_00594 [Bacillus cereus MSX-D12]
gi|401221738|gb|EJR28352.1| hypothetical protein IIG_04711 [Bacillus cereus VD048]
gi|401225194|gb|EJR31743.1| hypothetical protein IIE_04217 [Bacillus cereus VD045]
gi|401237336|gb|EJR43791.1| hypothetical protein IIK_05281 [Bacillus cereus VD102]
gi|401239297|gb|EJR45729.1| hypothetical protein III_00567 [Bacillus cereus VD078]
gi|401251657|gb|EJR57931.1| hypothetical protein IIO_04657 [Bacillus cereus VD115]
gi|401262652|gb|EJR68793.1| hypothetical protein IK3_00582 [Bacillus cereus VD148]
gi|401263501|gb|EJR69625.1| hypothetical protein IK5_04508 [Bacillus cereus VD154]
gi|401271209|gb|EJR77226.1| hypothetical protein IK9_04088 [Bacillus cereus VD166]
gi|401280762|gb|EJR86679.1| hypothetical protein IKA_04616 [Bacillus cereus VD169]
gi|401281535|gb|EJR87443.1| hypothetical protein IK7_00583 [Bacillus cereus VD156]
gi|401288621|gb|EJR94367.1| hypothetical protein IKG_04875 [Bacillus cereus VD200]
gi|401296197|gb|EJS01817.1| hypothetical protein IKO_04208 [Bacillus cereus VDM034]
gi|401303876|gb|EJS09437.1| hypothetical protein IKM_00612 [Bacillus cereus VDM022]
gi|401632424|gb|EJS50211.1| hypothetical protein ICE_04202 [Bacillus cereus BAG1X1-2]
gi|401639821|gb|EJS57558.1| hypothetical protein IC9_00572 [Bacillus cereus BAG1O-2]
gi|401642823|gb|EJS60529.1| hypothetical protein ICG_00596 [Bacillus cereus BAG1X1-3]
gi|401656288|gb|EJS73809.1| hypothetical protein ICU_00511 [Bacillus cereus BAG2X1-1]
gi|401660888|gb|EJS78361.1| hypothetical protein ICY_00361 [Bacillus cereus BAG2X1-3]
gi|401792193|gb|AFQ18232.1| NifU-like domain-containing protein [Bacillus thuringiensis HD-771]
gi|401796149|gb|AFQ10008.1| NifU-like domain-containing protein [Bacillus cereus FRI-35]
gi|401822003|gb|EJT21156.1| NifU-like domain-containing protein [Bacillus anthracis str. UR-1]
gi|401876658|gb|AFQ28825.1| NifU-like domain-containing protein [Bacillus thuringiensis HD-789]
gi|402420102|gb|EJV52374.1| hypothetical protein IEA_00661 [Bacillus cereus BAG4X2-1]
gi|402422265|gb|EJV54507.1| hypothetical protein IEK_00581 [Bacillus cereus BAG6O-1]
gi|402429787|gb|EJV61869.1| hypothetical protein IEU_04731 [Bacillus cereus BtB2-4]
gi|402432612|gb|EJV64668.1| hypothetical protein IEM_02438 [Bacillus cereus BAG6O-2]
gi|402443827|gb|EJV75721.1| hypothetical protein IG1_05088 [Bacillus cereus HD73]
gi|402445246|gb|EJV77119.1| hypothetical protein IG3_05077 [Bacillus cereus HuA2-1]
gi|402454377|gb|EJV86170.1| hypothetical protein IGE_00766 [Bacillus cereus HuB1-1]
gi|402464724|gb|EJV96413.1| hypothetical protein IGI_00579 [Bacillus cereus HuB2-9]
gi|403392848|gb|EJY90096.1| NifU-like domain-containing protein [Bacillus anthracis str. BF1]
gi|409176521|gb|AFV20826.1| putative nitrogen fixation protein YutI [Bacillus thuringiensis
Bt407]
gi|449025732|gb|AGE80895.1| nifU domain protein [Bacillus thuringiensis serovar kurstaki str.
HD73]
gi|452106860|gb|AGG03800.1| NifU-like domain protein [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 78
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Query: 85 VLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
VL+ +RP+L+ DGG++++V +E+G+V ++L GACGSCPSST T+ GIER L E+ I
Sbjct: 13 VLDKLRPFLLRDGGDVELVDIEEGIVKLRLMGACGSCPSSTITLKAGIERALLEEVPGVI 72
Query: 145 KDIRQVY 151
++ QV+
Sbjct: 73 -EVEQVF 78
>gi|65316943|ref|ZP_00389902.1| COG0694: Thioredoxin-like proteins and domains [Bacillus anthracis
str. A2012]
Length = 95
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Query: 85 VLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
VL+ +RP+L+ DGG++++V +E+G+V ++L GACGSCPSST T+ GIER L E+ I
Sbjct: 13 VLDKLRPFLLRDGGDVELVDIEEGIVKLRLMGACGSCPSSTITLKAGIERALLEEVPGVI 72
Query: 145 KDIRQVY 151
++ QV+
Sbjct: 73 -EVEQVF 78
>gi|452991063|emb|CCQ97689.1| Nitrogen-fixing NifU domain protein [Clostridium ultunense Esp]
Length = 75
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 53/69 (76%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
+ V+ VL+ +RP++ +DGG+++++ VEDG+V ++L GACGSCPSST T+ GIER L EK
Sbjct: 5 EKVEEVLDKLRPFIQSDGGDVELLDVEDGIVKLRLLGACGSCPSSTITLKAGIERALMEK 64
Query: 140 FGDAIKDIR 148
+ ++ I+
Sbjct: 65 VPEVVEVIQ 73
>gi|228993673|ref|ZP_04153580.1| hypothetical protein bpmyx0001_43990 [Bacillus pseudomycoides DSM
12442]
gi|228999709|ref|ZP_04159285.1| hypothetical protein bmyco0003_42630 [Bacillus mycoides Rock3-17]
gi|229007266|ref|ZP_04164867.1| hypothetical protein bmyco0002_41480 [Bacillus mycoides Rock1-4]
gi|229087461|ref|ZP_04219595.1| hypothetical protein bcere0022_40270 [Bacillus cereus Rock3-44]
gi|423613112|ref|ZP_17588972.1| hypothetical protein IIM_03826 [Bacillus cereus VD107]
gi|228695883|gb|EEL48734.1| hypothetical protein bcere0022_40270 [Bacillus cereus Rock3-44]
gi|228754020|gb|EEM03457.1| hypothetical protein bmyco0002_41480 [Bacillus mycoides Rock1-4]
gi|228760071|gb|EEM09041.1| hypothetical protein bmyco0003_42630 [Bacillus mycoides Rock3-17]
gi|228766102|gb|EEM14749.1| hypothetical protein bpmyx0001_43990 [Bacillus pseudomycoides DSM
12442]
gi|401242674|gb|EJR49047.1| hypothetical protein IIM_03826 [Bacillus cereus VD107]
Length = 78
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Query: 85 VLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
VL+ +RP+L+ DGG++++V +E+G+V ++L GACGSCPSST T+ GIER L E+ I
Sbjct: 13 VLDKLRPFLLRDGGDVELVDIEEGIVKLRLMGACGSCPSSTITLKAGIERALLEEVPGVI 72
Query: 145 KDIRQVY 151
++ QV+
Sbjct: 73 -EVEQVF 78
>gi|229916513|ref|YP_002885159.1| nitrogen-fixing NifU domain-containing protein [Exiguobacterium sp.
AT1b]
gi|229467942|gb|ACQ69714.1| nitrogen-fixing NifU domain protein [Exiguobacterium sp. AT1b]
Length = 75
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 81 NVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
V VL+ +RP+L+ DGG++++V VE+G+V ++L GACGSCPSST T+ GIER L E+
Sbjct: 6 QVQEVLDKLRPFLLRDGGDVELVDVEEGIVKLRLMGACGSCPSSTITLKAGIERALIEEV 65
Query: 141 GDAIKDIRQVY 151
I ++ QV+
Sbjct: 66 -PGIVEVEQVF 75
>gi|386715202|ref|YP_006181525.1| hypothetical protein HBHAL_3909 [Halobacillus halophilus DSM 2266]
gi|384074758|emb|CCG46251.1| conserved hypothetical protein [Halobacillus halophilus DSM 2266]
Length = 73
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
+ V VL +RP+L+ DGG++++V VEDG+V ++L GACG+CPSST T+ GIER L ++
Sbjct: 3 EQVQEVLNKLRPFLLRDGGDVELVDVEDGIVRLRLMGACGNCPSSTITLKAGIERALAQE 62
Query: 140 FGDAIKDIRQVY 151
I ++ QV+
Sbjct: 63 V-PGIYEVEQVF 73
>gi|407795445|ref|ZP_11142404.1| hypothetical protein MJ3_01045 [Salimicrobium sp. MJ3]
gi|407020330|gb|EKE33043.1| hypothetical protein MJ3_01045 [Salimicrobium sp. MJ3]
Length = 73
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
+ V VL +RP+L+ DGG++++V VEDG+V ++L GACG+CPSST T+ GIER L ++
Sbjct: 3 EQVQEVLNKLRPFLLRDGGDVELVDVEDGIVRLRLMGACGNCPSSTITLKAGIERALSQE 62
Query: 140 FGDAIKDIRQVY 151
I ++ QV+
Sbjct: 63 V-PGIYEVEQVF 73
>gi|118578775|ref|YP_900025.1| NifU domain-containing protein [Pelobacter propionicus DSM 2379]
gi|118501485|gb|ABK97967.1| nitrogen-fixing NifU domain protein [Pelobacter propionicus DSM
2379]
Length = 74
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 54/72 (75%), Gaps = 2/72 (2%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
++V VL VRP L ADGG++++V V DG+V V+L+GACGSCP ST T+ MGIER +KE
Sbjct: 3 EDVLRVLGQVRPALQADGGDVELVEVTADGIVKVRLKGACGSCPMSTMTLKMGIERAMKE 62
Query: 139 KFGDAIKDIRQV 150
+ A+K++ QV
Sbjct: 63 QI-PAVKEVVQV 73
>gi|311031755|ref|ZP_07709845.1| NifU-like protein [Bacillus sp. m3-13]
Length = 78
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Query: 85 VLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
VL+ +RP+L+ DGG+ ++V VEDG+V ++L GACGSCPSST T+ GIER L E+ I
Sbjct: 13 VLDKLRPFLLRDGGDCELVDVEDGIVKLRLLGACGSCPSSTITLKAGIERALLEEV-PGI 71
Query: 145 KDIRQVY 151
++ QV+
Sbjct: 72 IEVEQVF 78
>gi|333373977|ref|ZP_08465871.1| NifU domain protein [Desmospora sp. 8437]
gi|332968729|gb|EGK07781.1| NifU domain protein [Desmospora sp. 8437]
Length = 73
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
+ V VL+ +RP++ DGG++++V+VEDGVV V+L GACGSCPSST T+ GIER L E+
Sbjct: 3 EQVQEVLDKLRPFIQRDGGDVELVNVEDGVVKVRLLGACGSCPSSTITLKAGIERALMEE 62
Query: 140 FGDAIKDIRQVY 151
+ ++ QV
Sbjct: 63 I-PGVTEVEQVL 73
>gi|282875569|ref|ZP_06284440.1| NifU-like protein [Staphylococcus epidermidis SK135]
gi|281295596|gb|EFA88119.1| NifU-like protein [Staphylococcus epidermidis SK135]
Length = 80
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 53/77 (68%), Gaps = 5/77 (6%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
FD A+ V+E +RP+L+ DGG+ +V VEDG+V ++L GACG+CPSST T+ GIER
Sbjct: 9 FDQVAE----VIERLRPFLLRDGGDCTLVDVEDGIVKLQLHGACGTCPSSTITLKAGIER 64
Query: 135 VLKEKFGDAIKDIRQVY 151
L E+ I ++ QV+
Sbjct: 65 ALHEEVPGVI-EVEQVF 80
>gi|27467548|ref|NP_764185.1| nitrogen fixation protein NifU [Staphylococcus epidermidis ATCC
12228]
gi|57866465|ref|YP_188114.1| NifU domain-containing protein [Staphylococcus epidermidis RP62A]
gi|242242226|ref|ZP_04796671.1| NifU family protein [Staphylococcus epidermidis W23144]
gi|251810309|ref|ZP_04824782.1| NifU family protein [Staphylococcus epidermidis BCM-HMP0060]
gi|293368312|ref|ZP_06614940.1| NifU domain protein [Staphylococcus epidermidis M23864:W2(grey)]
gi|416123938|ref|ZP_11595124.1| nifU-like domain protein [Staphylococcus epidermidis FRI909]
gi|417646565|ref|ZP_12296420.1| NifU-like protein [Staphylococcus epidermidis VCU144]
gi|417656361|ref|ZP_12306048.1| NifU-like protein [Staphylococcus epidermidis VCU028]
gi|417658592|ref|ZP_12308216.1| NifU-like protein [Staphylococcus epidermidis VCU045]
gi|417910032|ref|ZP_12553764.1| NifU-like protein [Staphylococcus epidermidis VCU037]
gi|417911758|ref|ZP_12555458.1| NifU-like protein [Staphylococcus epidermidis VCU105]
gi|417913515|ref|ZP_12557181.1| NifU-like protein [Staphylococcus epidermidis VCU109]
gi|418326502|ref|ZP_12937686.1| NifU-like protein [Staphylococcus epidermidis VCU071]
gi|418327576|ref|ZP_12938728.1| NifU-like protein [Staphylococcus epidermidis 14.1.R1.SE]
gi|418411392|ref|ZP_12984660.1| hypothetical protein HMPREF9281_00264 [Staphylococcus epidermidis
BVS058A4]
gi|418604240|ref|ZP_13167600.1| NifU-like protein [Staphylococcus epidermidis VCU041]
gi|418608258|ref|ZP_13171463.1| NifU-like protein [Staphylococcus epidermidis VCU057]
gi|418609294|ref|ZP_13172451.1| NifU-like protein [Staphylococcus epidermidis VCU065]
gi|418611357|ref|ZP_13174447.1| NifU-like protein [Staphylococcus epidermidis VCU117]
gi|418615864|ref|ZP_13178799.1| NifU-like protein [Staphylococcus epidermidis VCU118]
gi|418617222|ref|ZP_13180126.1| NifU-like protein [Staphylococcus epidermidis VCU120]
gi|418620997|ref|ZP_13183787.1| NifU-like protein [Staphylococcus epidermidis VCU123]
gi|418624320|ref|ZP_13186996.1| NifU-like protein [Staphylococcus epidermidis VCU125]
gi|418626693|ref|ZP_13189290.1| NifU-like protein [Staphylococcus epidermidis VCU126]
gi|418628890|ref|ZP_13191410.1| NifU-like protein [Staphylococcus epidermidis VCU127]
gi|418632584|ref|ZP_13195014.1| NifU-like protein [Staphylococcus epidermidis VCU128]
gi|418633465|ref|ZP_13195880.1| NifU-like protein [Staphylococcus epidermidis VCU129]
gi|418663803|ref|ZP_13225310.1| NifU-like protein [Staphylococcus epidermidis VCU081]
gi|419770088|ref|ZP_14296174.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-250]
gi|419770753|ref|ZP_14296820.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-K]
gi|420162795|ref|ZP_14669550.1| NifU domain protein [Staphylococcus epidermidis NIHLM095]
gi|420166875|ref|ZP_14673553.1| NifU domain protein [Staphylococcus epidermidis NIHLM088]
gi|420167238|ref|ZP_14673899.1| NifU domain protein [Staphylococcus epidermidis NIHLM087]
gi|420171327|ref|ZP_14677871.1| NifU domain protein [Staphylococcus epidermidis NIHLM070]
gi|420172172|ref|ZP_14678687.1| NifU domain protein [Staphylococcus epidermidis NIHLM067]
gi|420175305|ref|ZP_14681745.1| NifU domain protein [Staphylococcus epidermidis NIHLM061]
gi|420177632|ref|ZP_14683968.1| NifU domain protein [Staphylococcus epidermidis NIHLM057]
gi|420179415|ref|ZP_14685708.1| NifU domain protein [Staphylococcus epidermidis NIHLM053]
gi|420182565|ref|ZP_14688701.1| NifU domain protein [Staphylococcus epidermidis NIHLM049]
gi|420185272|ref|ZP_14691367.1| NifU domain protein [Staphylococcus epidermidis NIHLM040]
gi|420187836|ref|ZP_14693852.1| NifU domain protein [Staphylococcus epidermidis NIHLM039]
gi|420189209|ref|ZP_14695193.1| NifU domain protein [Staphylococcus epidermidis NIHLM037]
gi|420193303|ref|ZP_14699157.1| NifU domain protein [Staphylococcus epidermidis NIHLM023]
gi|420194397|ref|ZP_14700211.1| NifU domain protein [Staphylococcus epidermidis NIHLM021]
gi|420198256|ref|ZP_14703971.1| NifU domain protein [Staphylococcus epidermidis NIHLM020]
gi|420199649|ref|ZP_14705320.1| NifU domain protein [Staphylococcus epidermidis NIHLM031]
gi|420203131|ref|ZP_14708715.1| NifU domain protein [Staphylococcus epidermidis NIHLM018]
gi|420203845|ref|ZP_14709406.1| NifU domain protein [Staphylococcus epidermidis NIHLM015]
gi|420206726|ref|ZP_14712231.1| NifU domain protein [Staphylococcus epidermidis NIHLM008]
gi|420210365|ref|ZP_14715793.1| NifU domain protein [Staphylococcus epidermidis NIHLM003]
gi|420212027|ref|ZP_14717382.1| NifU domain protein [Staphylococcus epidermidis NIHLM001]
gi|420215565|ref|ZP_14720830.1| NifU domain protein [Staphylococcus epidermidis NIH05005]
gi|420218289|ref|ZP_14723385.1| NifU domain protein [Staphylococcus epidermidis NIH05001]
gi|420221133|ref|ZP_14726086.1| NifU domain protein [Staphylococcus epidermidis NIH04008]
gi|420222248|ref|ZP_14727170.1| NifU-like protein [Staphylococcus epidermidis NIH08001]
gi|420225174|ref|ZP_14730009.1| NifU-like protein [Staphylococcus epidermidis NIH06004]
gi|420226753|ref|ZP_14731531.1| NifU-like protein [Staphylococcus epidermidis NIH05003]
gi|420229073|ref|ZP_14733783.1| NifU-like protein [Staphylococcus epidermidis NIH04003]
gi|420231435|ref|ZP_14736085.1| NifU-like protein [Staphylococcus epidermidis NIH051668]
gi|420234099|ref|ZP_14738671.1| NifU-like protein [Staphylococcus epidermidis NIH051475]
gi|421607554|ref|ZP_16048793.1| NifU domain-containing protein [Staphylococcus epidermidis AU12-03]
gi|27315092|gb|AAO04227.1|AE016746_17 nitrogen fixation protein NifU [Staphylococcus epidermidis ATCC
12228]
gi|57637123|gb|AAW53911.1| NifU domain protein [Staphylococcus epidermidis RP62A]
gi|242234321|gb|EES36633.1| NifU family protein [Staphylococcus epidermidis W23144]
gi|251806191|gb|EES58848.1| NifU family protein [Staphylococcus epidermidis BCM-HMP0060]
gi|291317559|gb|EFE57977.1| NifU domain protein [Staphylococcus epidermidis M23864:W2(grey)]
gi|319401786|gb|EFV89994.1| nifU-like domain protein [Staphylococcus epidermidis FRI909]
gi|329726827|gb|EGG63287.1| NifU-like protein [Staphylococcus epidermidis VCU144]
gi|329736812|gb|EGG73077.1| NifU-like protein [Staphylococcus epidermidis VCU028]
gi|329737604|gb|EGG73850.1| NifU-like protein [Staphylococcus epidermidis VCU045]
gi|341651914|gb|EGS75705.1| NifU-like protein [Staphylococcus epidermidis VCU037]
gi|341652269|gb|EGS76058.1| NifU-like protein [Staphylococcus epidermidis VCU105]
gi|341655325|gb|EGS79054.1| NifU-like protein [Staphylococcus epidermidis VCU109]
gi|365225423|gb|EHM66667.1| NifU-like protein [Staphylococcus epidermidis VCU071]
gi|365232829|gb|EHM73805.1| NifU-like protein [Staphylococcus epidermidis 14.1.R1.SE]
gi|374402135|gb|EHQ73177.1| NifU-like protein [Staphylococcus epidermidis VCU057]
gi|374405462|gb|EHQ76396.1| NifU-like protein [Staphylococcus epidermidis VCU041]
gi|374408074|gb|EHQ78913.1| NifU-like protein [Staphylococcus epidermidis VCU065]
gi|374411128|gb|EHQ81847.1| NifU-like protein [Staphylococcus epidermidis VCU081]
gi|374816049|gb|EHR80265.1| NifU-like protein [Staphylococcus epidermidis VCU118]
gi|374819069|gb|EHR83200.1| NifU-like protein [Staphylococcus epidermidis VCU120]
gi|374823443|gb|EHR87439.1| NifU-like protein [Staphylococcus epidermidis VCU117]
gi|374827838|gb|EHR91695.1| NifU-like protein [Staphylococcus epidermidis VCU125]
gi|374830856|gb|EHR94616.1| NifU-like protein [Staphylococcus epidermidis VCU123]
gi|374831467|gb|EHR95207.1| NifU-like protein [Staphylococcus epidermidis VCU126]
gi|374832154|gb|EHR95874.1| NifU-like protein [Staphylococcus epidermidis VCU128]
gi|374835270|gb|EHR98889.1| NifU-like protein [Staphylococcus epidermidis VCU127]
gi|374839310|gb|EHS02825.1| NifU-like protein [Staphylococcus epidermidis VCU129]
gi|383357551|gb|EID35020.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-250]
gi|383363099|gb|EID40444.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-K]
gi|394232088|gb|EJD77707.1| NifU domain protein [Staphylococcus epidermidis NIHLM088]
gi|394235792|gb|EJD81342.1| NifU domain protein [Staphylococcus epidermidis NIHLM095]
gi|394238200|gb|EJD83678.1| NifU domain protein [Staphylococcus epidermidis NIHLM070]
gi|394238867|gb|EJD84324.1| NifU domain protein [Staphylococcus epidermidis NIHLM087]
gi|394243643|gb|EJD89005.1| NifU domain protein [Staphylococcus epidermidis NIHLM067]
gi|394243767|gb|EJD89128.1| NifU domain protein [Staphylococcus epidermidis NIHLM061]
gi|394248016|gb|EJD93258.1| NifU domain protein [Staphylococcus epidermidis NIHLM057]
gi|394250110|gb|EJD95312.1| NifU domain protein [Staphylococcus epidermidis NIHLM049]
gi|394253930|gb|EJD98918.1| NifU domain protein [Staphylococcus epidermidis NIHLM053]
gi|394255006|gb|EJD99966.1| NifU domain protein [Staphylococcus epidermidis NIHLM040]
gi|394255681|gb|EJE00628.1| NifU domain protein [Staphylococcus epidermidis NIHLM039]
gi|394260155|gb|EJE04975.1| NifU domain protein [Staphylococcus epidermidis NIHLM023]
gi|394262848|gb|EJE07603.1| NifU domain protein [Staphylococcus epidermidis NIHLM037]
gi|394264642|gb|EJE09317.1| NifU domain protein [Staphylococcus epidermidis NIHLM020]
gi|394264787|gb|EJE09458.1| NifU domain protein [Staphylococcus epidermidis NIHLM021]
gi|394268462|gb|EJE13019.1| NifU domain protein [Staphylococcus epidermidis NIHLM018]
gi|394271399|gb|EJE15892.1| NifU domain protein [Staphylococcus epidermidis NIHLM031]
gi|394274427|gb|EJE18848.1| NifU domain protein [Staphylococcus epidermidis NIHLM015]
gi|394276417|gb|EJE20757.1| NifU domain protein [Staphylococcus epidermidis NIHLM003]
gi|394276829|gb|EJE21162.1| NifU domain protein [Staphylococcus epidermidis NIHLM008]
gi|394280294|gb|EJE24578.1| NifU domain protein [Staphylococcus epidermidis NIHLM001]
gi|394282063|gb|EJE26276.1| NifU domain protein [Staphylococcus epidermidis NIH05005]
gi|394284580|gb|EJE28688.1| NifU domain protein [Staphylococcus epidermidis NIH05001]
gi|394285092|gb|EJE29178.1| NifU domain protein [Staphylococcus epidermidis NIH04008]
gi|394289484|gb|EJE33365.1| NifU-like protein [Staphylococcus epidermidis NIH08001]
gi|394293918|gb|EJE37615.1| NifU-like protein [Staphylococcus epidermidis NIH06004]
gi|394298202|gb|EJE41782.1| NifU-like protein [Staphylococcus epidermidis NIH05003]
gi|394299598|gb|EJE43137.1| NifU-like protein [Staphylococcus epidermidis NIH04003]
gi|394302661|gb|EJE46099.1| NifU-like protein [Staphylococcus epidermidis NIH051668]
gi|394304596|gb|EJE47994.1| NifU-like protein [Staphylococcus epidermidis NIH051475]
gi|406656759|gb|EKC83159.1| NifU domain-containing protein [Staphylococcus epidermidis AU12-03]
gi|410892936|gb|EKS40727.1| hypothetical protein HMPREF9281_00264 [Staphylococcus epidermidis
BVS058A4]
Length = 80
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 53/77 (68%), Gaps = 5/77 (6%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
FD A+ V+E +RP+L+ DGG+ +V VEDG+V ++L GACG+CPSST T+ GIER
Sbjct: 9 FDQVAE----VIERLRPFLLRDGGDCTLVDVEDGIVKLQLHGACGTCPSSTITLKAGIER 64
Query: 135 VLKEKFGDAIKDIRQVY 151
L E+ I ++ QV+
Sbjct: 65 ALHEEVPGVI-EVEQVF 80
>gi|402300060|ref|ZP_10819612.1| nitrogen fixation protein [Bacillus alcalophilus ATCC 27647]
gi|401724783|gb|EJS98113.1| nitrogen fixation protein [Bacillus alcalophilus ATCC 27647]
Length = 80
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 53/75 (70%), Gaps = 2/75 (2%)
Query: 78 TAKNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
T V VL+ +RP+L+ DGG++++V V EDG+V V+L GACGSCPSST T+ GIER L
Sbjct: 7 TFDQVREVLDKLRPFLLRDGGDVELVDVSEDGIVQVRLLGACGSCPSSTITLKAGIERAL 66
Query: 137 KEKFGDAIKDIRQVY 151
E+ I +I QV+
Sbjct: 67 LEEV-PGITEIEQVF 80
>gi|149183085|ref|ZP_01861537.1| YutI [Bacillus sp. SG-1]
gi|148849214|gb|EDL63412.1| YutI [Bacillus sp. SG-1]
Length = 78
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 81 NVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
V VL+ +RP+L+ DGG+ ++V +EDG+V ++L GACGSCPSST T+ GIER L E+
Sbjct: 9 QVQEVLDKLRPFLLRDGGDCELVDIEDGIVKLRLLGACGSCPSSTITLKAGIERALLEEV 68
Query: 141 GDAIKDIRQVY 151
I ++ QV+
Sbjct: 69 -PGIVEVEQVF 78
>gi|39995588|ref|NP_951539.1| thioredoxin/NifU-like domain-containing protein [Geobacter
sulfurreducens PCA]
gi|409911045|ref|YP_006889510.1| thioredoxin/NifU-like domain-containing protein [Geobacter
sulfurreducens KN400]
gi|39982351|gb|AAR33812.1| thioredoxin/NifU-like domain protein [Geobacter sulfurreducens PCA]
gi|298504607|gb|ADI83330.1| thioredoxin/NifU-like domain protein [Geobacter sulfurreducens
KN400]
Length = 74
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
++V VL+ VRP L ADGG++++V V EDGVV VKL GACG CP ST T+ MGIER LKE
Sbjct: 3 EDVKKVLDLVRPALQADGGDVELVEVTEDGVVKVKLVGACGHCPMSTMTLKMGIERTLKE 62
Query: 139 KF 140
K
Sbjct: 63 KV 64
>gi|260892780|ref|YP_003238877.1| nitrogen-fixing NifU domain-containing protein [Ammonifex degensii
KC4]
gi|260864921|gb|ACX52027.1| nitrogen-fixing NifU domain protein [Ammonifex degensii KC4]
Length = 72
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 52/71 (73%), Gaps = 4/71 (5%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
+ V+ L +RP+L DGG++++V+VEDGVV V+L+GACG CP + T+ GIER+LKE
Sbjct: 3 EKVEAALAQIRPHLQRDGGDVELVAVEDGVVKVRLKGACGGCPMAMVTLKQGIERILKE- 61
Query: 140 FGDAIKDIRQV 150
A+ ++++V
Sbjct: 62 ---AVPEVKEV 69
>gi|222054851|ref|YP_002537213.1| nitrogen-fixing NifU domain-containing protein [Geobacter daltonii
FRC-32]
gi|221564140|gb|ACM20112.1| nitrogen-fixing NifU domain protein [Geobacter daltonii FRC-32]
Length = 73
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
++V VL+ +RP L ADGG++++V V EDGVV VKL GACG CP ST T+ MGIER LKE
Sbjct: 3 EDVKKVLDTIRPNLQADGGDVELVEVGEDGVVKVKLVGACGHCPMSTMTLKMGIERTLKE 62
Query: 139 KF 140
K
Sbjct: 63 KV 64
>gi|15923926|ref|NP_371460.1| hypothetical protein SAV0936 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15926525|ref|NP_374058.1| hypothetical protein SA0797 [Staphylococcus aureus subsp. aureus
N315]
gi|21282547|ref|NP_645635.1| hypothetical protein MW0818 [Staphylococcus aureus subsp. aureus
MW2]
gi|49483096|ref|YP_040320.1| hypothetical protein SAR0898 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49485712|ref|YP_042933.1| hypothetical protein SAS0806 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|82750551|ref|YP_416292.1| hypothetical protein SAB0802c [Staphylococcus aureus RF122]
gi|87159950|ref|YP_493539.1| hypothetical protein SAUSA300_0839 [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88194630|ref|YP_499426.1| hypothetical protein SAOUHSC_00873 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|148267370|ref|YP_001246313.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
JH9]
gi|150393423|ref|YP_001316098.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
JH1]
gi|151221019|ref|YP_001331841.1| hypothetical protein NWMN_0807 [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156979262|ref|YP_001441521.1| hypothetical protein SAHV_0931 [Staphylococcus aureus subsp. aureus
Mu3]
gi|161509138|ref|YP_001574797.1| hypothetical protein USA300HOU_0897 [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|221141927|ref|ZP_03566420.1| hypothetical protein SauraJ_09890 [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|253316824|ref|ZP_04840037.1| hypothetical protein SauraC_11885 [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|253731543|ref|ZP_04865708.1| NifU family protein [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253732709|ref|ZP_04866874.1| NifU family protein [Staphylococcus aureus subsp. aureus TCH130]
gi|255005726|ref|ZP_05144327.2| hypothetical protein SauraM_04635 [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257424985|ref|ZP_05601412.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
55/2053]
gi|257427651|ref|ZP_05604050.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus subsp. aureus 65-1322]
gi|257430286|ref|ZP_05606669.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257432983|ref|ZP_05609343.1| nitrogen fixation protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257435887|ref|ZP_05611935.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M876]
gi|257795329|ref|ZP_05644308.1| nitrogen fixation protein NifU [Staphylococcus aureus A9781]
gi|258406978|ref|ZP_05680131.1| nitrogen fixation protein NifU [Staphylococcus aureus A9763]
gi|258421946|ref|ZP_05684867.1| conserved hypothetical protein [Staphylococcus aureus A9719]
gi|258424377|ref|ZP_05687257.1| nitrogen fixation protein [Staphylococcus aureus A9635]
gi|258435343|ref|ZP_05689082.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|258441555|ref|ZP_05690915.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus A8115]
gi|258447254|ref|ZP_05695403.1| conserved hypothetical protein [Staphylococcus aureus A6300]
gi|258450014|ref|ZP_05698112.1| nitrogen fixation protein NifU [Staphylococcus aureus A6224]
gi|258452112|ref|ZP_05700128.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|258455527|ref|ZP_05703486.1| conserved hypothetical protein [Staphylococcus aureus A5937]
gi|262049630|ref|ZP_06022498.1| hypothetical protein SAD30_1213 [Staphylococcus aureus D30]
gi|262052935|ref|ZP_06025116.1| hypothetical protein SA930_0147 [Staphylococcus aureus 930918-3]
gi|269202551|ref|YP_003281820.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
ED98]
gi|282893963|ref|ZP_06302194.1| thioredoxin [Staphylococcus aureus A8117]
gi|282903473|ref|ZP_06311364.1| NifU domain protein [Staphylococcus aureus subsp. aureus C160]
gi|282905251|ref|ZP_06313108.1| thioredoxin-family protein [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282908231|ref|ZP_06316062.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus subsp. aureus WW2703/97]
gi|282910512|ref|ZP_06318316.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus subsp. aureus WBG10049]
gi|282913708|ref|ZP_06321497.1| NifU domain protein [Staphylococcus aureus subsp. aureus M899]
gi|282916186|ref|ZP_06323948.1| thioredoxin-like protein [Staphylococcus aureus subsp. aureus D139]
gi|282918634|ref|ZP_06326371.1| thioredoxin-like protein [Staphylococcus aureus subsp. aureus C427]
gi|282922215|ref|ZP_06329910.1| thioredoxin-like protein [Staphylococcus aureus A9765]
gi|282923624|ref|ZP_06331304.1| thioredoxin-like protein [Staphylococcus aureus subsp. aureus C101]
gi|282927159|ref|ZP_06334781.1| thioredoxin-like protein [Staphylococcus aureus A10102]
gi|283770001|ref|ZP_06342893.1| thioredoxin protein [Staphylococcus aureus subsp. aureus H19]
gi|283957674|ref|ZP_06375127.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|284023863|ref|ZP_06378261.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
132]
gi|293500750|ref|ZP_06666601.1| thioredoxin protein [Staphylococcus aureus subsp. aureus 58-424]
gi|293509700|ref|ZP_06668411.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus subsp. aureus M809]
gi|293524288|ref|ZP_06670975.1| NifU domain protein [Staphylococcus aureus subsp. aureus M1015]
gi|294850211|ref|ZP_06790947.1| thioredoxin-like protein [Staphylococcus aureus A9754]
gi|295405741|ref|ZP_06815550.1| thioredoxin-like protein [Staphylococcus aureus A8819]
gi|295427419|ref|ZP_06820054.1| thioredoxin-like protein [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296275869|ref|ZP_06858376.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
MR1]
gi|297208429|ref|ZP_06924859.1| NifU domain protein [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297245332|ref|ZP_06929203.1| hypothetical protein SLAG_01427 [Staphylococcus aureus A8796]
gi|297590221|ref|ZP_06948860.1| NifU domain protein [Staphylococcus aureus subsp. aureus MN8]
gi|300912505|ref|ZP_07129948.1| NifU domain protein [Staphylococcus aureus subsp. aureus TCH70]
gi|304381511|ref|ZP_07364161.1| NifU domain protein [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|379014132|ref|YP_005290368.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
VC40]
gi|379795313|ref|YP_005325311.1| NifU family protein [Staphylococcus aureus subsp. aureus MSHR1132]
gi|384547126|ref|YP_005736379.1| nitrogen fixation protein [Staphylococcus aureus subsp. aureus
ED133]
gi|384549700|ref|YP_005738952.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus subsp. aureus JKD6159]
gi|384861535|ref|YP_005744255.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus subsp. aureus str. JKD6008]
gi|384864166|ref|YP_005749525.1| nifU-like domain protein [Staphylococcus aureus subsp. aureus ECT-R
2]
gi|384868197|ref|YP_005748393.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
TCH60]
gi|384869468|ref|YP_005752182.1| Nitrogen-fixing NifU domain protein [Staphylococcus aureus subsp.
aureus T0131]
gi|385781166|ref|YP_005757337.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
11819-97]
gi|386830479|ref|YP_006237133.1| hypothetical protein SAEMRSA15_07660 [Staphylococcus aureus subsp.
aureus HO 5096 0412]
gi|387142555|ref|YP_005730948.1| hypothetical protein SATW20_09360 [Staphylococcus aureus subsp.
aureus TW20]
gi|387150076|ref|YP_005741640.1| nitrogen-fixing NifU domain protein [Staphylococcus aureus
04-02981]
gi|387602197|ref|YP_005733718.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
ST398]
gi|387780056|ref|YP_005754854.1| hypothetical protein SARLGA251_08540 [Staphylococcus aureus subsp.
aureus LGA251]
gi|404478247|ref|YP_006709677.1| hypothetical protein C248_0935 [Staphylococcus aureus 08BA02176]
gi|415683676|ref|ZP_11448892.1| possible NifU family protein [Staphylococcus aureus subsp. aureus
CGS00]
gi|415688006|ref|ZP_11451785.1| possible NifU family protein [Staphylococcus aureus subsp. aureus
CGS01]
gi|415692112|ref|ZP_11454178.1| possible NifU family protein [Staphylococcus aureus subsp. aureus
CGS03]
gi|416839551|ref|ZP_11902937.1| NifU domain-containing protein [Staphylococcus aureus O11]
gi|416844945|ref|ZP_11905581.1| NifU domain-containing protein [Staphylococcus aureus O46]
gi|417649853|ref|ZP_12299643.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21189]
gi|417650551|ref|ZP_12300319.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21172]
gi|417653125|ref|ZP_12302861.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21193]
gi|417795268|ref|ZP_12442492.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21305]
gi|417799484|ref|ZP_12446623.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21310]
gi|417800544|ref|ZP_12447660.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21318]
gi|417888472|ref|ZP_12532582.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21195]
gi|417892079|ref|ZP_12536136.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21200]
gi|417893082|ref|ZP_12537118.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21201]
gi|417895186|ref|ZP_12539187.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21235]
gi|417898807|ref|ZP_12542724.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21259]
gi|417901579|ref|ZP_12545455.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21266]
gi|417902948|ref|ZP_12546808.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21269]
gi|418278153|ref|ZP_12892280.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21178]
gi|418283210|ref|ZP_12895965.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21202]
gi|418285905|ref|ZP_12898568.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21209]
gi|418308275|ref|ZP_12919911.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21194]
gi|418311305|ref|ZP_12922831.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21331]
gi|418312440|ref|ZP_12923949.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21334]
gi|418318050|ref|ZP_12929465.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21232]
gi|418321536|ref|ZP_12932876.1| NifU-like protein [Staphylococcus aureus subsp. aureus VCU006]
gi|418424076|ref|ZP_12997203.1| putative nitrogen fixation protein yutI [Staphylococcus aureus
subsp. aureus VRS1]
gi|418426964|ref|ZP_12999982.1| putative nitrogen fixation protein yutI [Staphylococcus aureus
subsp. aureus VRS2]
gi|418429911|ref|ZP_13002832.1| putative nitrogen fixation protein yutI [Staphylococcus aureus
subsp. aureus VRS3a]
gi|418432877|ref|ZP_13005660.1| putative nitrogen fixation protein yutI [Staphylococcus aureus
subsp. aureus VRS4]
gi|418436540|ref|ZP_13008346.1| hypothetical protein MQI_02396 [Staphylococcus aureus subsp. aureus
VRS5]
gi|418439417|ref|ZP_13011127.1| hypothetical protein MQK_00272 [Staphylococcus aureus subsp. aureus
VRS6]
gi|418442464|ref|ZP_13014068.1| putative nitrogen fixation protein yutI [Staphylococcus aureus
subsp. aureus VRS7]
gi|418448475|ref|ZP_13019870.1| hypothetical protein MQQ_00482 [Staphylococcus aureus subsp. aureus
VRS9]
gi|418451282|ref|ZP_13022619.1| hypothetical protein MQS_01325 [Staphylococcus aureus subsp. aureus
VRS10]
gi|418454357|ref|ZP_13025622.1| hypothetical protein MQU_01203 [Staphylococcus aureus subsp. aureus
VRS11a]
gi|418457233|ref|ZP_13028439.1| hypothetical protein MQW_01483 [Staphylococcus aureus subsp. aureus
VRS11b]
gi|418560859|ref|ZP_13125365.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21252]
gi|418561670|ref|ZP_13126152.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21262]
gi|418565686|ref|ZP_13130081.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21264]
gi|418569198|ref|ZP_13133535.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21272]
gi|418571797|ref|ZP_13136019.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21283]
gi|418574131|ref|ZP_13138308.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21333]
gi|418578767|ref|ZP_13142862.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1114]
gi|418581566|ref|ZP_13145646.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1605]
gi|418596131|ref|ZP_13159709.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21342]
gi|418598210|ref|ZP_13161721.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21343]
gi|418601813|ref|ZP_13165229.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21345]
gi|418639651|ref|ZP_13201892.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-3]
gi|418642543|ref|ZP_13204729.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-24]
gi|418643637|ref|ZP_13205799.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-55]
gi|418647876|ref|ZP_13209933.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-88]
gi|418649442|ref|ZP_13211470.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-91]
gi|418653985|ref|ZP_13215907.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-99]
gi|418657694|ref|ZP_13219456.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-105]
gi|418659104|ref|ZP_13220796.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-111]
gi|418662393|ref|ZP_13223944.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-122]
gi|418872229|ref|ZP_13426574.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-125]
gi|418874863|ref|ZP_13429128.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIGC93]
gi|418877778|ref|ZP_13432014.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1165]
gi|418880614|ref|ZP_13434833.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1213]
gi|418883541|ref|ZP_13437738.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1769]
gi|418886196|ref|ZP_13440346.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1150]
gi|418888736|ref|ZP_13442872.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1524]
gi|418891482|ref|ZP_13445599.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1176]
gi|418894391|ref|ZP_13448489.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1057]
gi|418897257|ref|ZP_13451330.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIGC341D]
gi|418901650|ref|ZP_13455699.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1214]
gi|418903142|ref|ZP_13457183.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1770]
gi|418905872|ref|ZP_13459899.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|418908633|ref|ZP_13462641.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG149]
gi|418911544|ref|ZP_13465527.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG547]
gi|418914031|ref|ZP_13468003.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|418916720|ref|ZP_13470680.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1267]
gi|418919785|ref|ZP_13473726.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIGC348]
gi|418922508|ref|ZP_13476425.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1233]
gi|418925105|ref|ZP_13479008.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG2018]
gi|418928190|ref|ZP_13482076.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1612]
gi|418930923|ref|ZP_13484770.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1750]
gi|418933773|ref|ZP_13487597.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIGC128]
gi|418947745|ref|ZP_13500089.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-157]
gi|418952668|ref|ZP_13504684.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-189]
gi|418981758|ref|ZP_13529472.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1242]
gi|418983812|ref|ZP_13531510.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1500]
gi|418987760|ref|ZP_13535433.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1835]
gi|418990799|ref|ZP_13538460.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1096]
gi|418993553|ref|ZP_13541190.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG290]
gi|419775762|ref|ZP_14301691.1| NifU-like protein [Staphylococcus aureus subsp. aureus CO-23]
gi|419785871|ref|ZP_14311616.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-M]
gi|421149615|ref|ZP_15609273.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
str. Newbould 305]
gi|422743674|ref|ZP_16797658.1| NifU-like domain protein [Staphylococcus aureus subsp. aureus
MRSA177]
gi|422745832|ref|ZP_16799771.1| NifU-like domain protein [Staphylococcus aureus subsp. aureus
MRSA131]
gi|424767243|ref|ZP_18194572.1| NifU-like protein [Staphylococcus aureus subsp. aureus CM05]
gi|424784761|ref|ZP_18211564.1| NifU-like domain protein [Staphylococcus aureus CN79]
gi|440708465|ref|ZP_20889129.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21282]
gi|440734388|ref|ZP_20914000.1| hypothetical protein SASA_03980 [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|443636350|ref|ZP_21120464.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21236]
gi|443640075|ref|ZP_21124073.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21196]
gi|448741342|ref|ZP_21723308.1| NifU-like protein [Staphylococcus aureus KT/314250]
gi|448744837|ref|ZP_21726717.1| NifU-like protein [Staphylococcus aureus KT/Y21]
gi|13700740|dbj|BAB42036.1| SA0797 [Staphylococcus aureus subsp. aureus N315]
gi|14246705|dbj|BAB57098.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
Mu50]
gi|21203984|dbj|BAB94683.1| MW0818 [Staphylococcus aureus subsp. aureus MW2]
gi|49241225|emb|CAG39904.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49244155|emb|CAG42581.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|82656082|emb|CAI80490.1| nitrogen fixation protein [Staphylococcus aureus RF122]
gi|87125924|gb|ABD20438.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87202188|gb|ABD29998.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|147740439|gb|ABQ48737.1| nitrogen-fixing NifU domain protein [Staphylococcus aureus subsp.
aureus JH9]
gi|149945875|gb|ABR51811.1| nitrogen-fixing NifU domain protein [Staphylococcus aureus subsp.
aureus JH1]
gi|150373819|dbj|BAF67079.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156721397|dbj|BAF77814.1| hypothetical protein SAHV_0931 [Staphylococcus aureus subsp. aureus
Mu3]
gi|160367947|gb|ABX28918.1| possible NifU family protein [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253724786|gb|EES93515.1| NifU family protein [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253729320|gb|EES98049.1| NifU family protein [Staphylococcus aureus subsp. aureus TCH130]
gi|257272555|gb|EEV04678.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
55/2053]
gi|257275844|gb|EEV07317.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus subsp. aureus 65-1322]
gi|257279063|gb|EEV09674.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257282398|gb|EEV12533.1| nitrogen fixation protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257285078|gb|EEV15197.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M876]
gi|257789301|gb|EEV27641.1| nitrogen fixation protein NifU [Staphylococcus aureus A9781]
gi|257841517|gb|EEV65958.1| nitrogen fixation protein NifU [Staphylococcus aureus A9763]
gi|257842279|gb|EEV66707.1| conserved hypothetical protein [Staphylococcus aureus A9719]
gi|257845390|gb|EEV69424.1| nitrogen fixation protein [Staphylococcus aureus A9635]
gi|257849004|gb|EEV72987.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|257852345|gb|EEV76271.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus A8115]
gi|257854002|gb|EEV76956.1| conserved hypothetical protein [Staphylococcus aureus A6300]
gi|257856934|gb|EEV79837.1| nitrogen fixation protein NifU [Staphylococcus aureus A6224]
gi|257860327|gb|EEV83159.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|257862345|gb|EEV85114.1| conserved hypothetical protein [Staphylococcus aureus A5937]
gi|259159186|gb|EEW44249.1| hypothetical protein SA930_0147 [Staphylococcus aureus 930918-3]
gi|259162272|gb|EEW46846.1| hypothetical protein SAD30_1213 [Staphylococcus aureus D30]
gi|262074841|gb|ACY10814.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
ED98]
gi|269940438|emb|CBI48815.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TW20]
gi|282314492|gb|EFB44882.1| thioredoxin-like protein [Staphylococcus aureus subsp. aureus C101]
gi|282317768|gb|EFB48140.1| thioredoxin-like protein [Staphylococcus aureus subsp. aureus C427]
gi|282319626|gb|EFB49974.1| thioredoxin-like protein [Staphylococcus aureus subsp. aureus D139]
gi|282322740|gb|EFB53062.1| NifU domain protein [Staphylococcus aureus subsp. aureus M899]
gi|282325904|gb|EFB56212.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus subsp. aureus WBG10049]
gi|282327896|gb|EFB58178.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus subsp. aureus WW2703/97]
gi|282331658|gb|EFB61170.1| thioredoxin-family protein [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282590848|gb|EFB95923.1| thioredoxin-like protein [Staphylococcus aureus A10102]
gi|282593505|gb|EFB98499.1| thioredoxin-like protein [Staphylococcus aureus A9765]
gi|282596428|gb|EFC01389.1| NifU domain protein [Staphylococcus aureus subsp. aureus C160]
gi|282763449|gb|EFC03578.1| thioredoxin [Staphylococcus aureus A8117]
gi|283460148|gb|EFC07238.1| thioredoxin protein [Staphylococcus aureus subsp. aureus H19]
gi|283470135|emb|CAQ49346.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
ST398]
gi|283791125|gb|EFC29940.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|285816615|gb|ADC37102.1| nitrogen-fixing NifU domain protein [Staphylococcus aureus
04-02981]
gi|290921251|gb|EFD98312.1| NifU domain protein [Staphylococcus aureus subsp. aureus M1015]
gi|291095755|gb|EFE26016.1| thioredoxin protein [Staphylococcus aureus subsp. aureus 58-424]
gi|291467797|gb|EFF10312.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus subsp. aureus M809]
gi|294822985|gb|EFG39418.1| thioredoxin-like protein [Staphylococcus aureus A9754]
gi|294969176|gb|EFG45196.1| thioredoxin-like protein [Staphylococcus aureus A8819]
gi|295128807|gb|EFG58438.1| thioredoxin-like protein [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296887168|gb|EFH26071.1| NifU domain protein [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297177635|gb|EFH36885.1| hypothetical protein SLAG_01427 [Staphylococcus aureus A8796]
gi|297576520|gb|EFH95235.1| NifU domain protein [Staphylococcus aureus subsp. aureus MN8]
gi|298694175|gb|ADI97397.1| nitrogen fixation protein [Staphylococcus aureus subsp. aureus
ED133]
gi|300886751|gb|EFK81953.1| NifU domain protein [Staphylococcus aureus subsp. aureus TCH70]
gi|302332549|gb|ADL22742.1| nitrogen-fixing NifU domain protein [Staphylococcus aureus subsp.
aureus JKD6159]
gi|302750764|gb|ADL64941.1| nitrogen-fixing NifU domain protein [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|304339874|gb|EFM05818.1| NifU domain protein [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|312438702|gb|ADQ77773.1| NifU domain protein [Staphylococcus aureus subsp. aureus TCH60]
gi|312829333|emb|CBX34175.1| nifU-like domain protein [Staphylococcus aureus subsp. aureus ECT-R
2]
gi|315130484|gb|EFT86471.1| possible NifU family protein [Staphylococcus aureus subsp. aureus
CGS03]
gi|315194468|gb|EFU24860.1| possible NifU family protein [Staphylococcus aureus subsp. aureus
CGS00]
gi|315197289|gb|EFU27627.1| possible NifU family protein [Staphylococcus aureus subsp. aureus
CGS01]
gi|320141247|gb|EFW33094.1| NifU-like domain protein [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320143019|gb|EFW34810.1| NifU-like domain protein [Staphylococcus aureus subsp. aureus
MRSA177]
gi|323440910|gb|EGA98618.1| NifU domain-containing protein [Staphylococcus aureus O11]
gi|323443798|gb|EGB01410.1| NifU domain-containing protein [Staphylococcus aureus O46]
gi|329313603|gb|AEB88016.1| Nitrogen-fixing NifU domain protein [Staphylococcus aureus subsp.
aureus T0131]
gi|329726251|gb|EGG62721.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21189]
gi|329728166|gb|EGG64605.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21172]
gi|329733972|gb|EGG70294.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21193]
gi|334271782|gb|EGL90163.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21305]
gi|334273591|gb|EGL91933.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21310]
gi|334277878|gb|EGL96094.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21318]
gi|341841938|gb|EGS83376.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21235]
gi|341845418|gb|EGS86620.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21266]
gi|341847766|gb|EGS88940.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21259]
gi|341850481|gb|EGS91600.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21269]
gi|341851365|gb|EGS92294.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21200]
gi|341855172|gb|EGS96024.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21195]
gi|341856184|gb|EGS97026.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21201]
gi|344177158|emb|CCC87622.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
LGA251]
gi|356872303|emb|CCE58642.1| NifU family protein [Staphylococcus aureus subsp. aureus MSHR1132]
gi|364522155|gb|AEW64905.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
11819-97]
gi|365168171|gb|EHM59527.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21202]
gi|365168797|gb|EHM60133.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21209]
gi|365172679|gb|EHM63351.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21178]
gi|365224794|gb|EHM66055.1| NifU-like protein [Staphylococcus aureus subsp. aureus VCU006]
gi|365234716|gb|EHM75644.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21331]
gi|365238085|gb|EHM78922.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21334]
gi|365240308|gb|EHM81089.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21194]
gi|365244742|gb|EHM85399.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21232]
gi|371970873|gb|EHO88288.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21252]
gi|371972597|gb|EHO89971.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21264]
gi|371976868|gb|EHO94154.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21262]
gi|371977855|gb|EHO95114.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21272]
gi|371978649|gb|EHO95891.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21283]
gi|371980228|gb|EHO97442.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21333]
gi|374362829|gb|AEZ36934.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
VC40]
gi|374397624|gb|EHQ68833.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21345]
gi|374399040|gb|EHQ70190.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21342]
gi|374399912|gb|EHQ71044.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21343]
gi|375015656|gb|EHS09300.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-24]
gi|375016663|gb|EHS10298.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-3]
gi|375017551|gb|EHS11164.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-99]
gi|375028334|gb|EHS21680.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-88]
gi|375028412|gb|EHS21757.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-55]
gi|375029524|gb|EHS22850.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-105]
gi|375029815|gb|EHS23140.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-91]
gi|375036517|gb|EHS29585.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-122]
gi|375036615|gb|EHS29681.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-111]
gi|375367417|gb|EHS71379.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-125]
gi|375374475|gb|EHS78103.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-157]
gi|375376382|gb|EHS79917.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-189]
gi|377695392|gb|EHT19753.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1165]
gi|377695744|gb|EHT20101.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1057]
gi|377696794|gb|EHT21149.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1114]
gi|377700600|gb|EHT24936.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1214]
gi|377706357|gb|EHT30654.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1242]
gi|377710246|gb|EHT34487.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1500]
gi|377711116|gb|EHT35349.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1605]
gi|377715275|gb|EHT39465.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1769]
gi|377715760|gb|EHT39946.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1750]
gi|377719548|gb|EHT43718.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1835]
gi|377722921|gb|EHT47046.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1096]
gi|377724922|gb|EHT49037.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG547]
gi|377727494|gb|EHT51601.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1150]
gi|377731507|gb|EHT55560.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1213]
gi|377732439|gb|EHT56490.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1176]
gi|377735831|gb|EHT59861.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1233]
gi|377738102|gb|EHT62111.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1612]
gi|377742157|gb|EHT66142.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1770]
gi|377746400|gb|EHT70371.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG2018]
gi|377746712|gb|EHT70682.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG290]
gi|377750872|gb|EHT74808.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1267]
gi|377754246|gb|EHT78155.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1524]
gi|377755972|gb|EHT79870.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG149]
gi|377757533|gb|EHT81421.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|377762036|gb|EHT85905.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIGC341D]
gi|377765172|gb|EHT89022.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|377767001|gb|EHT90822.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIGC348]
gi|377771206|gb|EHT94961.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIGC93]
gi|377771553|gb|EHT95307.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIGC128]
gi|383361912|gb|EID39275.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-M]
gi|383970368|gb|EID86471.1| NifU-like protein [Staphylococcus aureus subsp. aureus CO-23]
gi|385195871|emb|CCG15482.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
HO 5096 0412]
gi|387719725|gb|EIK07659.1| putative nitrogen fixation protein yutI [Staphylococcus aureus
subsp. aureus VRS3a]
gi|387719900|gb|EIK07827.1| putative nitrogen fixation protein yutI [Staphylococcus aureus
subsp. aureus VRS2]
gi|387721128|gb|EIK09012.1| putative nitrogen fixation protein yutI [Staphylococcus aureus
subsp. aureus VRS1]
gi|387726113|gb|EIK13695.1| putative nitrogen fixation protein yutI [Staphylococcus aureus
subsp. aureus VRS4]
gi|387728656|gb|EIK16139.1| hypothetical protein MQI_02396 [Staphylococcus aureus subsp. aureus
VRS5]
gi|387730904|gb|EIK18244.1| hypothetical protein MQK_00272 [Staphylococcus aureus subsp. aureus
VRS6]
gi|387738056|gb|EIK25109.1| putative nitrogen fixation protein yutI [Staphylococcus aureus
subsp. aureus VRS7]
gi|387738434|gb|EIK25472.1| hypothetical protein MQQ_00482 [Staphylococcus aureus subsp. aureus
VRS9]
gi|387745543|gb|EIK32294.1| hypothetical protein MQS_01325 [Staphylococcus aureus subsp. aureus
VRS10]
gi|387746436|gb|EIK33167.1| hypothetical protein MQU_01203 [Staphylococcus aureus subsp. aureus
VRS11a]
gi|387748076|gb|EIK34771.1| hypothetical protein MQW_01483 [Staphylococcus aureus subsp. aureus
VRS11b]
gi|394330532|gb|EJE56624.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
str. Newbould 305]
gi|402349189|gb|EJU84151.1| NifU-like protein [Staphylococcus aureus subsp. aureus CM05]
gi|404439736|gb|AFR72929.1| hypothetical protein C248_0935 [Staphylococcus aureus 08BA02176]
gi|421956171|gb|EKU08500.1| NifU-like domain protein [Staphylococcus aureus CN79]
gi|436431416|gb|ELP28769.1| hypothetical protein SASA_03980 [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|436504803|gb|ELP40772.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21282]
gi|443405951|gb|ELS64540.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21196]
gi|443407873|gb|ELS66405.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21236]
gi|445547917|gb|ELY16177.1| NifU-like protein [Staphylococcus aureus KT/314250]
gi|445561806|gb|ELY17994.1| NifU-like protein [Staphylococcus aureus KT/Y21]
Length = 80
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 53/77 (68%), Gaps = 5/77 (6%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
FD A+ V+E +RP+L+ DGG+ ++ VEDG+V ++L GACG+CPSST T+ GIER
Sbjct: 9 FDQVAE----VIERLRPFLLRDGGDCSLIDVEDGIVKLQLHGACGTCPSSTITLKAGIER 64
Query: 135 VLKEKFGDAIKDIRQVY 151
L E+ I ++ QV+
Sbjct: 65 ALHEEVPGVI-EVEQVF 80
>gi|379020635|ref|YP_005297297.1| Nitrogen-fixing NifU domain protein [Staphylococcus aureus subsp.
aureus M013]
gi|418952071|ref|ZP_13504119.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-160]
gi|359829944|gb|AEV77922.1| Nitrogen-fixing NifU domain protein [Staphylococcus aureus subsp.
aureus M013]
gi|375369983|gb|EHS73826.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-160]
Length = 80
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 53/77 (68%), Gaps = 5/77 (6%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
FD A+ V+E +RP+L+ DGG+ ++ VEDG+V ++L GACG+CPSST T+ GIER
Sbjct: 9 FDQVAE----VIERLRPFLLRDGGDCSLIDVEDGIVKLQLHGACGTCPSSTITLKAGIER 64
Query: 135 VLKEKFGDAIKDIRQVY 151
L E+ I ++ QV+
Sbjct: 65 ALHEEVPGVI-EVEQVF 80
>gi|323488633|ref|ZP_08093875.1| NifU-like protein [Planococcus donghaensis MPA1U2]
gi|323397651|gb|EGA90455.1| NifU-like protein [Planococcus donghaensis MPA1U2]
gi|456012978|gb|EMF46659.1| NifU-like domain protein [Planococcus halocryophilus Or1]
Length = 78
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Query: 85 VLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
VL+ +RP+L+ DGG+ ++V +EDG+V ++L GACGSCPSST T+ GIER L E+ I
Sbjct: 13 VLDKLRPFLLRDGGDCELVDIEDGIVKLRLLGACGSCPSSTITLKAGIERALVEEV-PGI 71
Query: 145 KDIRQVY 151
++ QV+
Sbjct: 72 VEVEQVF 78
>gi|57651628|ref|YP_185809.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
COL]
gi|57285814|gb|AAW37908.1| NifU domain protein [Staphylococcus aureus subsp. aureus COL]
Length = 73
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 53/77 (68%), Gaps = 5/77 (6%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
FD A+ V+E +RP+L+ DGG+ ++ VEDG+V ++L GACG+CPSST T+ GIER
Sbjct: 2 FDQVAE----VIERLRPFLLRDGGDCSLIDVEDGIVKLQLHGACGTCPSSTITLKAGIER 57
Query: 135 VLKEKFGDAIKDIRQVY 151
L E+ I ++ QV+
Sbjct: 58 ALHEEVPGVI-EVEQVF 73
>gi|386728614|ref|YP_006194997.1| nifU-like protein [Staphylococcus aureus subsp. aureus 71193]
gi|418978823|ref|ZP_13526623.1| NifU-like protein [Staphylococcus aureus subsp. aureus DR10]
gi|379993647|gb|EIA15093.1| NifU-like protein [Staphylococcus aureus subsp. aureus DR10]
gi|384229907|gb|AFH69154.1| NifU-like protein [Staphylococcus aureus subsp. aureus 71193]
Length = 107
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 53/78 (67%), Gaps = 5/78 (6%)
Query: 74 QFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
FD A+ V+E +RP+L+ DGG+ ++ VEDG+V ++L GACG+CPSST T+ GIE
Sbjct: 35 MFDQVAE----VIERLRPFLLRDGGDCSLIDVEDGIVKLQLHGACGTCPSSTITLKAGIE 90
Query: 134 RVLKEKFGDAIKDIRQVY 151
R L E+ I ++ QV+
Sbjct: 91 RALHEEVPGVI-EVEQVF 107
>gi|389815642|ref|ZP_10206905.1| NifU-like protein [Planococcus antarcticus DSM 14505]
gi|388465848|gb|EIM08162.1| NifU-like protein [Planococcus antarcticus DSM 14505]
Length = 78
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
L V VL+ +RP+L+ DGG+ ++V +EDG+V ++L GACGSCPSST T+ GIER L
Sbjct: 5 LVEDQVMEVLDKLRPFLLRDGGDCELVDIEDGIVKLRLLGACGSCPSSTITLKAGIERAL 64
Query: 137 KEKFGDAIKDIRQVY 151
E+ I ++ QV+
Sbjct: 65 VEEV-PGIVEVEQVF 78
>gi|189426530|ref|YP_001953707.1| nitrogen-fixing NifU domain-containing protein [Geobacter lovleyi
SZ]
gi|189422789|gb|ACD97187.1| nitrogen-fixing NifU domain protein [Geobacter lovleyi SZ]
Length = 74
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 53/72 (73%), Gaps = 2/72 (2%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V VL+ VRP L DGG+++++ V DG+V VKLQGACGSCP ST T+ MGIE+ +KE
Sbjct: 3 EKVQAVLDQVRPMLQRDGGDVELIEVTADGIVKVKLQGACGSCPMSTMTLKMGIEKAIKE 62
Query: 139 KFGDAIKDIRQV 150
+ + I +++QV
Sbjct: 63 QIPE-IVEVQQV 73
>gi|337287610|ref|YP_004627082.1| nitrogen-fixing NifU domain-containing protein
[Thermodesulfobacterium sp. OPB45]
gi|334901348|gb|AEH22154.1| nitrogen-fixing NifU domain-containing protein
[Thermodesulfobacterium geofontis OPF15]
Length = 74
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 81 NVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
V+ L VRPYL ADGG++++V V EDGVV VKL+GACGSCP + T+ MGIER LK++
Sbjct: 5 EVEKALSKVRPYLQADGGDVELVEVTEDGVVKVKLKGACGSCPMALMTLKMGIERYLKKE 64
Query: 140 F 140
Sbjct: 65 I 65
>gi|410461170|ref|ZP_11314822.1| hypothetical protein BAZO_17911 [Bacillus azotoformans LMG 9581]
gi|409925955|gb|EKN63153.1| hypothetical protein BAZO_17911 [Bacillus azotoformans LMG 9581]
Length = 73
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
+ V+ VL +RP+L DGG+ ++V VEDG+V ++L GACGSCPSST T+ GIER L E+
Sbjct: 3 QQVEEVLNKLRPFLQRDGGDCELVDVEDGIVKLRLMGACGSCPSSTITLKAGIERALVEE 62
Query: 140 FGDAIKDIRQVY 151
I ++ QV+
Sbjct: 63 V-PGIVEVEQVF 73
>gi|294501686|ref|YP_003565386.1| NifU-like domain-containing protein [Bacillus megaterium QM B1551]
gi|295707034|ref|YP_003600109.1| NifU-like domain-containing protein [Bacillus megaterium DSM 319]
gi|384044478|ref|YP_005492495.1| thioredoxin-like protein [Bacillus megaterium WSH-002]
gi|294351623|gb|ADE71952.1| NifU-like domain protein [Bacillus megaterium QM B1551]
gi|294804693|gb|ADF41759.1| NifU-like domain protein [Bacillus megaterium DSM 319]
gi|345442169|gb|AEN87186.1| Thioredoxin-like protein [Bacillus megaterium WSH-002]
Length = 76
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 44/57 (77%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
+ V VLE +RP+L+ DGG+ ++V VEDG+V ++L GACGSCPSST T+ GIER L
Sbjct: 6 EQVQEVLEKLRPFLLRDGGDCELVDVEDGIVKLRLLGACGSCPSSTITLKAGIERAL 62
>gi|403235790|ref|ZP_10914376.1| NifU-like protein [Bacillus sp. 10403023]
Length = 78
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 42/52 (80%)
Query: 85 VLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
VL+ +RP+L+ DGG+ D+V VEDGVV ++L GACGSCPSST T+ GIER L
Sbjct: 13 VLDKLRPFLLRDGGDCDLVDVEDGVVKLRLLGACGSCPSSTITLKAGIERAL 64
>gi|322420167|ref|YP_004199390.1| nitrogen-fixing NifU domain-containing protein [Geobacter sp. M18]
gi|320126554|gb|ADW14114.1| nitrogen-fixing NifU domain protein [Geobacter sp. M18]
Length = 73
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V +LE++RP L ADGG++++V V +DGVV V+L GACG CP ST T+ MGIER +KE
Sbjct: 3 EEVKAILENIRPALQADGGDVELVEVTDDGVVKVRLVGACGHCPMSTMTLKMGIERTIKE 62
Query: 139 KF 140
K
Sbjct: 63 KI 64
>gi|418315960|ref|ZP_12927409.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21340]
gi|365242187|gb|EHM82907.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21340]
Length = 80
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 52/77 (67%), Gaps = 5/77 (6%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
FD A+ V+E +RP+L+ DGG+ + VEDG+V ++L GACG+CPSST T+ GIER
Sbjct: 9 FDQVAE----VIERLRPFLLRDGGDCSFIDVEDGIVKLQLHGACGTCPSSTITLKAGIER 64
Query: 135 VLKEKFGDAIKDIRQVY 151
L E+ I ++ QV+
Sbjct: 65 ALHEEVPGVI-EVEQVF 80
>gi|418445527|ref|ZP_13017007.1| hypothetical protein MQO_00553 [Staphylococcus aureus subsp. aureus
VRS8]
gi|387736513|gb|EIK23602.1| hypothetical protein MQO_00553 [Staphylococcus aureus subsp. aureus
VRS8]
Length = 80
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 52/77 (67%), Gaps = 5/77 (6%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
FD A+ V+E +RP+L DGG+ ++ VEDG+V ++L GACG+CPSST T+ GIER
Sbjct: 9 FDQVAE----VIERLRPFLFRDGGDCSLIDVEDGIVKLQLHGACGTCPSSTITLKAGIER 64
Query: 135 VLKEKFGDAIKDIRQVY 151
L E+ I ++ QV+
Sbjct: 65 ALHEEVPGVI-EVEQVF 80
>gi|365155028|ref|ZP_09351422.1| putative nitrogen fixation protein yutI [Bacillus smithii
7_3_47FAA]
gi|363628815|gb|EHL79522.1| putative nitrogen fixation protein yutI [Bacillus smithii
7_3_47FAA]
Length = 78
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
+ V VL+ +RP+L+ DGG+ ++ VEDG+V ++L GACGSCPSST T+ GIER L E+
Sbjct: 8 EQVQEVLDKLRPFLLRDGGDCQLMDVEDGIVKLRLLGACGSCPSSTITLKAGIERALLEE 67
Query: 140 FGDAIKDIRQVY 151
I ++ QV+
Sbjct: 68 V-PGIVEVEQVF 78
>gi|148263012|ref|YP_001229718.1| NifU domain-containing protein [Geobacter uraniireducens Rf4]
gi|146396512|gb|ABQ25145.1| nitrogen-fixing NifU domain protein [Geobacter uraniireducens Rf4]
Length = 73
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V VL+ +RP L ADGG++++V V EDGVV VKL GACG CP ST T+ MGIER LKE
Sbjct: 3 EEVKKVLDLIRPNLQADGGDVELVEVTEDGVVKVKLVGACGHCPMSTMTLKMGIERTLKE 62
Query: 139 KF 140
K
Sbjct: 63 KV 64
>gi|393199792|ref|YP_006461634.1| thioredoxin-like protein [Solibacillus silvestris StLB046]
gi|406668318|ref|ZP_11076052.1| Fe-S cluster assembly protein NifU [Bacillus isronensis B3W22]
gi|327439123|dbj|BAK15488.1| thioredoxin-like protein [Solibacillus silvestris StLB046]
gi|405383845|gb|EKB43310.1| Fe-S cluster assembly protein NifU [Bacillus isronensis B3W22]
Length = 78
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 81 NVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
V VL+ +RP+L+ DGG+ ++V +E+G+V ++L GACGSCPSST T+ GIER L E+
Sbjct: 9 QVQEVLDKLRPFLLRDGGDCELVDIEEGIVKLRLLGACGSCPSSTITLKAGIERALLEEV 68
Query: 141 GDAIKDIRQVY 151
I ++ QV+
Sbjct: 69 -PGIVEVEQVF 78
>gi|334135290|ref|ZP_08508782.1| NifU-like protein [Paenibacillus sp. HGF7]
gi|333607112|gb|EGL18434.1| NifU-like protein [Paenibacillus sp. HGF7]
Length = 82
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 42/52 (80%)
Query: 85 VLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
VL+ +RP+L DGG++++V VEDG+V +KL GACGSCPSST T+ GIER L
Sbjct: 17 VLDKLRPFLQRDGGDVELVDVEDGIVKLKLMGACGSCPSSTITLKAGIERAL 68
>gi|339498821|ref|YP_004696856.1| nitrogen-fixing NifU domain-containing protein [Spirochaeta
caldaria DSM 7334]
gi|338833170|gb|AEJ18348.1| nitrogen-fixing NifU domain-containing protein [Spirochaeta
caldaria DSM 7334]
Length = 74
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
+ + + LEDVRP L ADGG+++ VSV EDGVVS+KL GACGSCP S T+ MGIE+
Sbjct: 1 MLEERIKTALEDVRPSLQADGGDVEFVSVSEDGVVSLKLTGACGSCPMSQMTLRMGIEKY 60
Query: 136 LKE 138
LK+
Sbjct: 61 LKK 63
>gi|403379426|ref|ZP_10921483.1| nitrogen-fixing NifU domain-containing protein [Paenibacillus sp.
JC66]
Length = 81
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 42/52 (80%)
Query: 85 VLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
VL+ +RP+L DGG++++V VEDG+V +KL GACGSCPSST T+ GIER L
Sbjct: 16 VLDKLRPFLQRDGGDVELVDVEDGIVKLKLMGACGSCPSSTITLKAGIERAL 67
>gi|253575294|ref|ZP_04852632.1| nitrogen-fixing NifU domain-containing protein [Paenibacillus sp.
oral taxon 786 str. D14]
gi|251845291|gb|EES73301.1| nitrogen-fixing NifU domain-containing protein [Paenibacillus sp.
oral taxon 786 str. D14]
Length = 81
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 42/52 (80%)
Query: 85 VLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
VL+ +RP+L DGG++++V VEDG+V +KL GACGSCPSST T+ GIER L
Sbjct: 16 VLDKLRPFLQRDGGDVELVDVEDGIVKLKLMGACGSCPSSTITLKAGIERAL 67
>gi|212640233|ref|YP_002316753.1| thioredoxin-like protein [Anoxybacillus flavithermus WK1]
gi|212561713|gb|ACJ34768.1| Thioredoxin-like protein [Anoxybacillus flavithermus WK1]
Length = 80
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 44/57 (77%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
+ V VL+ +RP+L+ DGG+ ++V VEDGVV ++L GACGSCPSST T+ GIER L
Sbjct: 10 QQVQEVLDKLRPFLLRDGGDCELVDVEDGVVKLRLLGACGSCPSSTITLKAGIERAL 66
>gi|433447060|ref|ZP_20410767.1| thioredoxin-like protein [Anoxybacillus flavithermus TNO-09.006]
gi|432000118|gb|ELK21022.1| thioredoxin-like protein [Anoxybacillus flavithermus TNO-09.006]
Length = 80
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 44/57 (77%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
+ V VL+ +RP+L+ DGG+ ++V VEDGVV ++L GACGSCPSST T+ GIER L
Sbjct: 10 QQVQEVLDKLRPFLLRDGGDCELVDVEDGVVKLRLLGACGSCPSSTITLKAGIERAL 66
>gi|56421496|ref|YP_148814.1| nitrogen fixation NifU protein [Geobacillus kaustophilus HTA426]
gi|138896548|ref|YP_001127001.1| nitrogen fixation protein NifU [Geobacillus thermodenitrificans
NG80-2]
gi|56381338|dbj|BAD77246.1| nitrogen fixation protein (NifU protein) [Geobacillus kaustophilus
HTA426]
gi|134268061|gb|ABO68256.1| Nitrogen fixation protein NifU [Geobacillus thermodenitrificans
NG80-2]
Length = 80
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 44/57 (77%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
+ V VL+ +RP+L+ DGG+ ++V VEDGVV ++L GACGSCPSST T+ GIER L
Sbjct: 10 EQVQEVLDKLRPFLLRDGGDCELVDVEDGVVKLRLLGACGSCPSSTITLKAGIERAL 66
>gi|319650406|ref|ZP_08004549.1| nitrogen-fixing NifU-like protein [Bacillus sp. 2_A_57_CT2]
gi|317397967|gb|EFV78662.1| nitrogen-fixing NifU-like protein [Bacillus sp. 2_A_57_CT2]
Length = 79
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 72 AHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMG 131
A Q +T + V VL+ +RP+L+ DGG+ ++V VEDG+V ++L GACGSCPSST T+ G
Sbjct: 2 AEQTTMT-EQVQEVLDKLRPFLLRDGGDCELVDVEDGIVKLRLLGACGSCPSSTITLKAG 60
Query: 132 IERVL 136
IER L
Sbjct: 61 IERAL 65
>gi|197119169|ref|YP_002139596.1| thioredoxin/NifU-like domain-containing protein [Geobacter
bemidjiensis Bem]
gi|197088529|gb|ACH39800.1| thioredoxin/NifU-like domain protein [Geobacter bemidjiensis Bem]
Length = 73
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V +LE +RP L ADGG++++V V +DG+V V+L GACG CP ST T+ MGIER +KE
Sbjct: 3 EEVKAILEQIRPALQADGGDVELVEVTDDGIVKVRLVGACGHCPMSTMTLKMGIERTIKE 62
Query: 139 KF 140
K
Sbjct: 63 KV 64
>gi|261420397|ref|YP_003254079.1| nitrogen-fixing NifU domain-containing protein [Geobacillus sp.
Y412MC61]
gi|297528899|ref|YP_003670174.1| nitrogen-fixing NifU domain-containing protein [Geobacillus sp.
C56-T3]
gi|319768064|ref|YP_004133565.1| nitrogen-fixing NifU domain-containing protein [Geobacillus sp.
Y412MC52]
gi|375010084|ref|YP_004983717.1| nitrogen fixation protein yutI [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|448239224|ref|YP_007403282.1| YutI-like protein [Geobacillus sp. GHH01]
gi|261376854|gb|ACX79597.1| nitrogen-fixing NifU domain protein [Geobacillus sp. Y412MC61]
gi|297252151|gb|ADI25597.1| nitrogen-fixing NifU domain protein [Geobacillus sp. C56-T3]
gi|317112930|gb|ADU95422.1| nitrogen-fixing NifU domain protein [Geobacillus sp. Y412MC52]
gi|359288933|gb|AEV20617.1| nitrogen fixation protein yutI [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|445208066|gb|AGE23531.1| YutI-like protein [Geobacillus sp. GHH01]
Length = 78
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 44/57 (77%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
+ V VL+ +RP+L+ DGG+ ++V VEDGVV ++L GACGSCPSST T+ GIER L
Sbjct: 8 EQVQEVLDKLRPFLLRDGGDCELVDVEDGVVKLRLLGACGSCPSSTITLKAGIERAL 64
>gi|336114852|ref|YP_004569619.1| nitrogen-fixing NifU domain-containing protein [Bacillus coagulans
2-6]
gi|335368282|gb|AEH54233.1| nitrogen-fixing NifU domain protein [Bacillus coagulans 2-6]
Length = 78
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 45/61 (73%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
D + V VL+ +RP+L+ DGG+ +++ VEDG+V ++L GACGSCPSST T+ GIER
Sbjct: 4 DTITEQVQEVLDKLRPFLLRDGGDCELIDVEDGIVKLRLLGACGSCPSSTITLKAGIERA 63
Query: 136 L 136
L
Sbjct: 64 L 64
>gi|403669422|ref|ZP_10934634.1| hypothetical protein KJC8E_11385 [Kurthia sp. JC8E]
Length = 73
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 44/57 (77%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
+ V VL+ +RP+L+ DGG+ ++V VEDGVV ++L GACGSCPSST T+ GIER L
Sbjct: 3 EQVQEVLDKLRPFLLRDGGDCELVDVEDGVVKLRLLGACGSCPSSTITLKAGIERAL 59
>gi|302392635|ref|YP_003828455.1| nitrogen-fixing NifU domain-containing protein [Acetohalobium
arabaticum DSM 5501]
gi|302204712|gb|ADL13390.1| nitrogen-fixing NifU domain protein [Acetohalobium arabaticum DSM
5501]
Length = 72
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 44/61 (72%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
+ V+ L+ +RP L ADGG ++++ VE+GVV VKL GACG CP S T+ GIERVLKE+
Sbjct: 3 EEVEAALDKIRPSLEADGGGVELIDVEEGVVKVKLTGACGGCPMSQMTLKNGIERVLKEE 62
Query: 140 F 140
Sbjct: 63 I 63
>gi|239828215|ref|YP_002950839.1| nitrogen-fixing NifU domain-containing protein [Geobacillus sp.
WCH70]
gi|239808508|gb|ACS25573.1| nitrogen-fixing NifU domain protein [Geobacillus sp. WCH70]
Length = 78
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 44/57 (77%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
+ V VL+ +RP+L+ DGG+ +++ VEDGVV ++L GACGSCPSST T+ GIER L
Sbjct: 8 EQVQEVLDKLRPFLLRDGGDCELIDVEDGVVKLRLLGACGSCPSSTITLKAGIERAL 64
>gi|418323982|ref|ZP_12935239.1| NifU-like protein [Staphylococcus pettenkoferi VCU012]
gi|365228911|gb|EHM70084.1| NifU-like protein [Staphylococcus pettenkoferi VCU012]
Length = 80
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 4/67 (5%)
Query: 71 SAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSM 130
+A FD A+ V+E +RP+L+ DGG+ +V VEDG+V ++L GACG+CPSST T+
Sbjct: 5 NATMFDQVAE----VIEKLRPFLLRDGGDCSLVDVEDGIVKLQLHGACGTCPSSTITLKA 60
Query: 131 GIERVLK 137
GIER L
Sbjct: 61 GIERALH 67
>gi|404493984|ref|YP_006718090.1| thioredoxin/NifU-like domain-containing protein [Pelobacter
carbinolicus DSM 2380]
gi|404398041|gb|ABA89570.2| thioredoxin/NifU-like domain protein [Pelobacter carbinolicus DSM
2380]
Length = 75
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 44/54 (81%), Gaps = 1/54 (1%)
Query: 85 VLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
+L+ +RP L ADGG++++V + EDGVV V+L+GACGSCP ST T+ MGIER LK
Sbjct: 8 ILDKIRPSLQADGGDVELVDISEDGVVKVRLKGACGSCPMSTMTLKMGIERTLK 61
>gi|387928781|ref|ZP_10131459.1| iron-sulfur scaffold protein [Bacillus methanolicus PB1]
gi|415886944|ref|ZP_11548687.1| putative iron-sulfur scaffold protein [Bacillus methanolicus MGA3]
gi|387585595|gb|EIJ77920.1| putative iron-sulfur scaffold protein [Bacillus methanolicus MGA3]
gi|387588367|gb|EIJ80689.1| iron-sulfur scaffold protein [Bacillus methanolicus PB1]
Length = 78
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 76 DLTAK-NVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
DL K V +L+ +RP+L+ DGG+ ++V VEDG+V ++L GACGSCPSST T+ GIER
Sbjct: 3 DLEMKEQVQEILDKLRPFLLRDGGDCELVDVEDGIVKLRLLGACGSCPSSTITLKAGIER 62
Query: 135 VL 136
L
Sbjct: 63 AL 64
>gi|310643822|ref|YP_003948580.1| protein NifU [Paenibacillus polymyxa SC2]
gi|309248772|gb|ADO58339.1| NifU-like protein [Paenibacillus polymyxa SC2]
gi|392304552|emb|CCI70915.1| Fe/S biogenesis protein nfuA [Paenibacillus polymyxa M1]
Length = 81
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 42/52 (80%)
Query: 85 VLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
VL+ +RP+L DGG++++V VEDG+V +KL GACGSCPSST T+ GIER L
Sbjct: 16 VLDKLRPFLQRDGGDVELVDVEDGIVKLKLVGACGSCPSSTITLKAGIERAL 67
>gi|404329556|ref|ZP_10970004.1| nitrogen fixation protein NifU [Sporolactobacillus vineae DSM 21990
= SL153]
Length = 73
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
+ V+ V+E +RP+LI DGG+++++ V DG+V V+L GAC +CPSST T+ GIE+ L E
Sbjct: 3 EQVEEVIEKLRPFLIRDGGDVELLGVHDGIVRVRLLGACQNCPSSTLTLKAGIEQALMEN 62
Query: 140 FGDAIKDIRQVY 151
++++ QV+
Sbjct: 63 V-PGVRELEQVF 73
>gi|251798821|ref|YP_003013552.1| nitrogen-fixing NifU domain-containing protein [Paenibacillus sp.
JDR-2]
gi|247546447|gb|ACT03466.1| nitrogen-fixing NifU domain protein [Paenibacillus sp. JDR-2]
Length = 80
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 42/52 (80%)
Query: 85 VLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
VL+ +RP+L DGG++++V VEDG+V ++L GACGSCPSST T+ GIER L
Sbjct: 15 VLDKLRPFLQRDGGDVELVDVEDGIVKLRLMGACGSCPSSTITLKAGIERAL 66
>gi|242308908|ref|ZP_04808063.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
gi|239524572|gb|EEQ64438.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
Length = 81
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 45/61 (73%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
K V++V+E VRP LI DGGN+ ++ +E+G V V+L+GAC CPSS+ T+ GIER LK +
Sbjct: 11 KPVEMVIEKVRPMLINDGGNVTLLKIENGKVYVRLEGACKGCPSSSQTLKFGIERALKNE 70
Query: 140 F 140
Sbjct: 71 I 71
>gi|410456834|ref|ZP_11310687.1| nitrogen-fixing NifU domain-containing protein [Bacillus
bataviensis LMG 21833]
gi|409927308|gb|EKN64447.1| nitrogen-fixing NifU domain-containing protein [Bacillus
bataviensis LMG 21833]
Length = 78
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 43/56 (76%)
Query: 81 NVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
V VL+ +RP+L+ DGG+ ++V VEDG+V ++L GACGSCPSST T+ GIER L
Sbjct: 9 QVQEVLDKLRPFLLRDGGDCELVDVEDGIVKLRLLGACGSCPSSTITLKAGIERAL 64
>gi|373855944|ref|ZP_09598690.1| nitrogen-fixing NifU domain protein [Bacillus sp. 1NLA3E]
gi|372455013|gb|EHP28478.1| nitrogen-fixing NifU domain protein [Bacillus sp. 1NLA3E]
Length = 78
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
DL A+ V VL+ +RP+L+ DGG+ ++V +EDG+V ++L GACGSCPSST T+ GIER
Sbjct: 5 DLLAQ-VQEVLDKLRPFLLRDGGDCELVDIEDGIVKLRLLGACGSCPSSTITLKAGIERA 63
Query: 136 L 136
L
Sbjct: 64 L 64
>gi|328954876|ref|YP_004372209.1| nitrogen-fixing NifU domain-containing protein [Coriobacterium
glomerans PW2]
gi|328455200|gb|AEB06394.1| nitrogen-fixing NifU domain protein [Coriobacterium glomerans PW2]
Length = 92
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 54/78 (69%), Gaps = 9/78 (11%)
Query: 85 VLEDVRPYLIADGGNIDVVSVED-GVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFG-- 141
VL+++RP L ADGG++ V V+D GVV ++LQGAC CP S+ T+SMGIERVLKE
Sbjct: 11 VLDEIRPNLQADGGDLTFVGVDDDGVVQLELQGACAGCPMSSMTLSMGIERVLKEHVAGV 70
Query: 142 ---DAIKD---IRQVYDE 153
+A+ D + ++YDE
Sbjct: 71 TRVEAVNDTGGMDELYDE 88
>gi|398308156|ref|ZP_10511630.1| (Fe-S)-binding protein [Bacillus mojavensis RO-H-1]
Length = 78
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
+ V VL+ +RP+L+ DGG+ ++V V++G+V ++L GACGSCPSST T+ GIER L E+
Sbjct: 8 EQVQEVLDKLRPFLLRDGGDCELVDVDEGIVKLRLLGACGSCPSSTITLKAGIERALLEE 67
Query: 140 FGDAIKDIRQVY 151
I ++ QV+
Sbjct: 68 VPGVI-EVEQVF 78
>gi|89100547|ref|ZP_01173407.1| nitrogen fixation protein (NifU protein) [Bacillus sp. NRRL
B-14911]
gi|89084734|gb|EAR63875.1| nitrogen fixation protein (NifU protein) [Bacillus sp. NRRL
B-14911]
Length = 77
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 44/56 (78%)
Query: 81 NVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
+V VL+ +RP+L+ DGG+ ++V VEDG+V ++L GACGSCPSST T+ GIER L
Sbjct: 8 DVQEVLDKLRPFLLRDGGDCELVDVEDGIVKLRLLGACGSCPSSTITLKAGIERAL 63
>gi|417363|sp|P33179.1|NIFU_ANASL RecName: Full=Nitrogen fixation protein NifU
gi|2126543|pir||I39609 nifU protein - Anabaena sp. (fragment)
gi|142056|gb|AAA22013.1| NifU [Anabaena sp. L-31]
Length = 112
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 61/104 (58%), Gaps = 6/104 (5%)
Query: 37 IKPKNSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIAD 96
+K KN+V + + + + A +G L + + L K +D E+VRP LIAD
Sbjct: 6 VKEKNAV---TNLNTKGVNLTKEIANSGQKRALTNVQKIALIQKVLD---EEVRPVLIAD 59
Query: 97 GGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
GG++++ V+ +V V LQGACGSCPSST T+ + IE L+++
Sbjct: 60 GGDVELYDVDGDIVKVVLQGACGSCPSSTATLKIAIESRLRDRI 103
>gi|425737961|ref|ZP_18856230.1| hypothetical protein C273_06203 [Staphylococcus massiliensis S46]
gi|425480866|gb|EKU48029.1| hypothetical protein C273_06203 [Staphylococcus massiliensis S46]
Length = 80
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 43/56 (76%)
Query: 81 NVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
V +V+E +RP+L+ DGG+ +V VEDG+V ++L GACG+CPSST T+ GIER L
Sbjct: 11 QVAVVIEKLRPFLLRDGGDCSLVDVEDGIVKLQLHGACGTCPSSTITLKAGIERAL 66
>gi|253700042|ref|YP_003021231.1| nitrogen-fixing NifU domain-containing protein [Geobacter sp. M21]
gi|251774892|gb|ACT17473.1| nitrogen-fixing NifU domain protein [Geobacter sp. M21]
Length = 73
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V +LE +RP L ADGG++++V V +DG+V V+L GACG CP ST T+ MGIER +K+
Sbjct: 3 EEVKAILEQIRPALQADGGDVELVEVTDDGIVKVRLVGACGHCPMSTMTLKMGIERTIKD 62
Query: 139 KF 140
K
Sbjct: 63 KI 64
>gi|157693637|ref|YP_001488099.1| iron-sulfur assembly protein [Bacillus pumilus SAFR-032]
gi|194015287|ref|ZP_03053903.1| conserved domain protein [Bacillus pumilus ATCC 7061]
gi|389574230|ref|ZP_10164296.1| hypothetical protein BAME_28650 [Bacillus sp. M 2-6]
gi|407979013|ref|ZP_11159837.1| iron-sulfur assembly protein [Bacillus sp. HYC-10]
gi|157682395|gb|ABV63539.1| possible iron-sulfur assembly protein [Bacillus pumilus SAFR-032]
gi|194012691|gb|EDW22257.1| conserved domain protein [Bacillus pumilus ATCC 7061]
gi|388426091|gb|EIL83910.1| hypothetical protein BAME_28650 [Bacillus sp. M 2-6]
gi|407414457|gb|EKF36103.1| iron-sulfur assembly protein [Bacillus sp. HYC-10]
Length = 78
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 42/52 (80%)
Query: 85 VLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
VL+ +RP+L+ DGG+ ++V +EDG+V ++L GACGSCPSST T+ GIER L
Sbjct: 13 VLDKLRPFLLRDGGDCELVDIEDGIVKLRLLGACGSCPSSTITLKAGIERAL 64
>gi|111608856|gb|ABH10986.1| Fe-S cluster assembly protein NifU [Polytomella parva]
Length = 168
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 69/121 (57%), Gaps = 1/121 (0%)
Query: 47 SGSHETAIRASNPSAPAGSSPGLYSAHQFD-LTAKNVDLVLEDVRPYLIADGGNIDVVSV 105
SG+ T+ S S G + S +FD L+ +NV+ L+ +RP L+ DGG++++V +
Sbjct: 1 SGACGTSKPKSVASPFIGGNNSKESTQKFDVLSIENVNKSLDYIRPVLMNDGGDVEIVKI 60
Query: 106 EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIRQVYDEEVRETTVEVSAL 165
++G V ++ QG+C +C S TM GIE L+ FG+ +K+I QV + + + A
Sbjct: 61 QNGKVFLRFQGSCSTCTSQEDTMKGGIETTLRSSFGELLKEIIQVDKLQDEANVINIDAH 120
Query: 166 L 166
L
Sbjct: 121 L 121
>gi|403385471|ref|ZP_10927528.1| hypothetical protein KJC30_12265 [Kurthia sp. JC30]
Length = 73
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 44/57 (77%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
+ V V++ +RP+L+ DGG+ ++V VEDGVV ++L GACGSCPSST T+ GIER L
Sbjct: 3 EQVQEVIDKLRPFLLRDGGDCELVDVEDGVVKLRLLGACGSCPSSTITLKAGIERAL 59
>gi|303270897|ref|XP_003054810.1| iron-sulfur cluster scaffold protein, plastid precursor [Micromonas
pusilla CCMP1545]
gi|226462784|gb|EEH60062.1| iron-sulfur cluster scaffold protein, plastid precursor [Micromonas
pusilla CCMP1545]
Length = 406
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 52/65 (80%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT +NVD L++VRPYLIADGGN+ VV +EDGVV+V++ GACGSC SST T+ GIE+ L
Sbjct: 253 LTVENVDKALDEVRPYLIADGGNVAVVGIEDGVVAVRMSGACGSCSSSTATLKGGIEKTL 312
Query: 137 KEKFG 141
+ FG
Sbjct: 313 RRVFG 317
>gi|229816700|ref|ZP_04446988.1| hypothetical protein COLINT_03748 [Collinsella intestinalis DSM
13280]
gi|229807752|gb|EEP43566.1| hypothetical protein COLINT_03748 [Collinsella intestinalis DSM
13280]
Length = 98
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 44/55 (80%), Gaps = 1/55 (1%)
Query: 85 VLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
VLE +RP L ADGG+++ + V EDGVV ++LQGAC CP S+ T+SMG+ER+LKE
Sbjct: 16 VLEQIRPNLQADGGDMEYIGVTEDGVVKLELQGACAGCPMSSLTLSMGVERILKE 70
>gi|319891909|ref|YP_004148784.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
pseudintermedius HKU10-03]
gi|386319829|ref|YP_006015992.1| nitrogen fixation protein NifU [Staphylococcus pseudintermedius
ED99]
gi|317161605|gb|ADV05148.1| Nitrogen-fixing NifU domain protein [Staphylococcus
pseudintermedius HKU10-03]
gi|323465000|gb|ADX77153.1| nitrogen fixation protein NifU [Staphylococcus pseudintermedius
ED99]
Length = 80
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 48/66 (72%), Gaps = 4/66 (6%)
Query: 71 SAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSM 130
+A +D A+ V+E +RP+L+ DGG+ ++V VEDG+V ++L GACG+CPSST T+
Sbjct: 5 NATMYDQVAE----VIEKLRPFLLRDGGDCELVDVEDGIVKLQLLGACGTCPSSTITLKA 60
Query: 131 GIERVL 136
GIER L
Sbjct: 61 GIERAL 66
>gi|392940277|ref|ZP_10305921.1| thioredoxin-like protein [Thermoanaerobacter siderophilus SR4]
gi|392292027|gb|EIW00471.1| thioredoxin-like protein [Thermoanaerobacter siderophilus SR4]
Length = 73
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 52/72 (72%), Gaps = 5/72 (6%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V+ VLE +RP L ADGGN++++ V EDG+V V+L GACG CP +T T+ GIER +KE
Sbjct: 3 ERVEKVLELLRPSLQADGGNVELIDVTEDGIVKVRLTGACGGCPFATLTLKEGIERAIKE 62
Query: 139 KFGDAIKDIRQV 150
+ I ++R+V
Sbjct: 63 E----IPEVREV 70
>gi|326390563|ref|ZP_08212119.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter ethanolicus
JW 200]
gi|345018001|ref|YP_004820354.1| nitrogen-fixing NifU domain-containing protein [Thermoanaerobacter
wiegelii Rt8.B1]
gi|325993388|gb|EGD51824.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter ethanolicus
JW 200]
gi|344033344|gb|AEM79070.1| nitrogen-fixing NifU domain-containing protein [Thermoanaerobacter
wiegelii Rt8.B1]
Length = 73
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 52/72 (72%), Gaps = 5/72 (6%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V+ VLE +RP L ADGGN++++ V EDG+V V+L GACG CP +T T+ GIER +KE
Sbjct: 3 ERVEEVLELLRPSLQADGGNVELIDVTEDGIVKVRLTGACGGCPFATLTLKEGIERAIKE 62
Query: 139 KFGDAIKDIRQV 150
+ I ++R+V
Sbjct: 63 E----IPEVREV 70
>gi|295695724|ref|YP_003588962.1| nitrogen-fixing NifU domain-containing protein [Kyrpidia tusciae
DSM 2912]
gi|295411326|gb|ADG05818.1| nitrogen-fixing NifU domain protein [Kyrpidia tusciae DSM 2912]
Length = 73
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 51/71 (71%), Gaps = 4/71 (5%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
+ V+ LE +RP L DGG++++V VEDGVV++ L GACG+CP ST T+ MGIER L+
Sbjct: 4 EKVEEALERIRPGLQFDGGDVELVDVEDGVVTLHLIGACGACPMSTMTLKMGIERALRA- 62
Query: 140 FGDAIKDIRQV 150
A+ ++++V
Sbjct: 63 ---AVPEVKEV 70
>gi|300867915|ref|ZP_07112555.1| Fe-S cluster assembly protein NifU [Oscillatoria sp. PCC 6506]
gi|300334052|emb|CBN57731.1| Fe-S cluster assembly protein NifU [Oscillatoria sp. PCC 6506]
Length = 298
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 43/55 (78%)
Query: 85 VLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
VLE+VRP LIADGG++++ VE +V V L+GACGSCPSST+T+ IE LKEK
Sbjct: 234 VLEEVRPLLIADGGDVELYDVEGDIVKVLLKGACGSCPSSTSTLKGLIETTLKEK 288
>gi|337285384|ref|YP_004624857.1| nitrogen-fixing NifU domain-containing protein [Thermodesulfatator
indicus DSM 15286]
gi|335358212|gb|AEH43893.1| nitrogen-fixing NifU domain protein [Thermodesulfatator indicus DSM
15286]
Length = 74
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V+ L+ VRP L ADGG++++V V EDG+V ++LQGAC CP ST T+ MGIER LK+
Sbjct: 3 EEVEKALQKVRPMLQADGGDVELVEVTEDGIVKLRLQGACKGCPMSTYTLKMGIERFLKK 62
Query: 139 K 139
+
Sbjct: 63 E 63
>gi|346311545|ref|ZP_08853548.1| hypothetical protein HMPREF9452_01417 [Collinsella tanakaei YIT
12063]
gi|345900608|gb|EGX70428.1| hypothetical protein HMPREF9452_01417 [Collinsella tanakaei YIT
12063]
Length = 91
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Query: 85 VLEDVRPYLIADGGNIDVVSVED-GVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
VLE +RP L ADGG++ V V+D GVVS++LQGAC CP S T+SMG+ER+LKE
Sbjct: 11 VLEQIRPNLQADGGDMAYVGVDDDGVVSLELQGACAGCPMSQLTLSMGVERILKEH 66
>gi|347755644|ref|YP_004863208.1| thioredoxin-like protein [Candidatus Chloracidobacterium
thermophilum B]
gi|347588162|gb|AEP12692.1| Thioredoxin-like protein [Candidatus Chloracidobacterium
thermophilum B]
Length = 197
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 66/117 (56%), Gaps = 8/117 (6%)
Query: 33 QFISIKPKNSVLQKSGSHETAI--RASNP---SAPAGSSPGLYSAHQFDLTAKNVDLVLE 87
+FI+I N V + AI RA+ P SAPA +P + DL N D++
Sbjct: 79 RFITITKDNEVEWDELLRQVAIPIRAAEPVSVSAPA--APNIKRGENPDLDRIN-DILDA 135
Query: 88 DVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
+RP L DGG ++V+S +D ++V+ QGACGSCPSS + GI+ +L+++F I
Sbjct: 136 RIRPGLAGDGGGLEVISYKDNTLAVRYQGACGSCPSSISGTLYGIQSILRDEFNPEI 192
>gi|210630137|ref|ZP_03296252.1| hypothetical protein COLSTE_00136 [Collinsella stercoris DSM 13279]
gi|210160610|gb|EEA91581.1| NifU-like protein [Collinsella stercoris DSM 13279]
Length = 93
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 49/79 (62%), Gaps = 10/79 (12%)
Query: 85 VLEDVRPYLIADGGNIDVVSVED-GVVSVKLQGACGSCPSSTTTMSMGIERVLK------ 137
VLE +RP L ADGG++ V V D GVV ++LQGAC CP S+ T+SMGIER+LK
Sbjct: 11 VLEQIRPNLQADGGDMAYVGVTDEGVVQLELQGACAGCPMSSLTLSMGIERILKEHVPGV 70
Query: 138 ---EKFGDAIKDIRQVYDE 153
E+ G ++YDE
Sbjct: 71 TRVEQVGGGADAANELYDE 89
>gi|91200475|emb|CAJ73523.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 72
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ ++ L+ +RP L ADGG+I++V EDG+V V+L+GACGSCPSS T+ G+E LKE
Sbjct: 3 EKIEEALKGIRPALQADGGDIELVDYEDGIVKVRLKGACGSCPSSLATLKYGVEARLKE 61
>gi|16080275|ref|NP_391102.1| (Fe-S)-binding protein [Bacillus subtilis subsp. subtilis str. 168]
gi|386759807|ref|YP_006233024.1| (Fe-S)-binding protein [Bacillus sp. JS]
gi|402777379|ref|YP_006631323.1| iron-sulfur scaffold protein [Bacillus subtilis QB928]
gi|81342154|sp|O32119.1|YUTI_BACSU RecName: Full=Putative nitrogen fixation protein YutI
gi|2635719|emb|CAB15212.1| putative iron-sulfur scaffold protein [Bacillus subtilis subsp.
subtilis str. 168]
gi|384933090|gb|AFI29768.1| (Fe-S)-binding protein [Bacillus sp. JS]
gi|402482558|gb|AFQ59067.1| Putative iron-sulfur scaffold protein [Bacillus subtilis QB928]
Length = 111
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 44/57 (77%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
+ V VL+ +RP+L+ DGG+ ++V V++G+V ++L GACGSCPSST T+ GIER L
Sbjct: 41 EQVQEVLDKLRPFLLRDGGDCELVDVDEGIVKLRLLGACGSCPSSTITLKAGIERAL 97
>gi|304408198|ref|ZP_07389847.1| nitrogen-fixing NifU domain protein [Paenibacillus curdlanolyticus
YK9]
gi|304342886|gb|EFM08731.1| nitrogen-fixing NifU domain protein [Paenibacillus curdlanolyticus
YK9]
Length = 81
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 42/52 (80%)
Query: 85 VLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
VL+ +RP+L DGG++++V VE+G+V ++L GACGSCPSST T+ GIER L
Sbjct: 16 VLDKLRPFLQRDGGDVELVDVEEGIVKLRLVGACGSCPSSTITLKAGIERAL 67
>gi|88801953|ref|ZP_01117481.1| NifU-like protein [Polaribacter irgensii 23-P]
gi|88782611|gb|EAR13788.1| NifU-like protein [Polaribacter irgensii 23-P]
Length = 78
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 78 TAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
T +NV+ LE++RP+L++DGGNI ++S+EDGVV V+L+GAC C + T+ G+E +K
Sbjct: 6 TLENVEKALEEIRPFLMSDGGNIKLLSIEDGVVKVQLEGACTGCSVNQMTLKNGVEATIK 65
Query: 138 EKFGDAIKDIRQV 150
K+ I ++ V
Sbjct: 66 -KYAPQIVEVINV 77
>gi|221311164|ref|ZP_03593011.1| hypothetical protein Bsubs1_17486 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221315491|ref|ZP_03597296.1| hypothetical protein BsubsN3_17402 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221320406|ref|ZP_03601700.1| hypothetical protein BsubsJ_17365 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221324690|ref|ZP_03605984.1| hypothetical protein BsubsS_17516 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|296331794|ref|ZP_06874261.1| putative iron-sulfur scaffold protein [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305675816|ref|YP_003867488.1| iron-sulfur scaffold protein [Bacillus subtilis subsp. spizizenii
str. W23]
gi|311069717|ref|YP_003974640.1| iron-sulfur scaffold protein [Bacillus atrophaeus 1942]
gi|321312766|ref|YP_004205053.1| putative iron-sulfur scaffold protein [Bacillus subtilis BSn5]
gi|350267417|ref|YP_004878724.1| hypothetical protein GYO_3515 [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|375363652|ref|YP_005131691.1| Fe/S biogenesis protein nfuA [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|384176826|ref|YP_005558211.1| hypothetical protein I33_3321 [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
gi|384266752|ref|YP_005422459.1| Fe/S biogenesis protein nfuA [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|394992629|ref|ZP_10385404.1| iron-sulfur scaffold protein [Bacillus sp. 916]
gi|419821917|ref|ZP_14345506.1| (Fe-S)-binding protein [Bacillus atrophaeus C89]
gi|421730387|ref|ZP_16169516.1| (Fe-S)-binding protein [Bacillus amyloliquefaciens subsp. plantarum
M27]
gi|428280729|ref|YP_005562464.1| hypothetical protein BSNT_04769 [Bacillus subtilis subsp. natto
BEST195]
gi|429506498|ref|YP_007187682.1| iron-sulfur scaffold protein [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|443634273|ref|ZP_21118448.1| iron-sulfur scaffold protein [Bacillus subtilis subsp. inaquosorum
KCTC 13429]
gi|451345641|ref|YP_007444272.1| iron-sulfur scaffold protein [Bacillus amyloliquefaciens IT-45]
gi|452856838|ref|YP_007498521.1| Putative nitrogen fixation protein yutI [Bacillus amyloliquefaciens
subsp. plantarum UCMB5036]
gi|452913781|ref|ZP_21962409.1| nifU-like domain protein [Bacillus subtilis MB73/2]
gi|291485686|dbj|BAI86761.1| hypothetical protein BSNT_04769 [Bacillus subtilis subsp. natto
BEST195]
gi|296151119|gb|EFG92001.1| putative iron-sulfur scaffold protein [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305414060|gb|ADM39179.1| putative iron-sulfur scaffold protein [Bacillus subtilis subsp.
spizizenii str. W23]
gi|310870234|gb|ADP33709.1| putative iron-sulfur scaffold protein [Bacillus atrophaeus 1942]
gi|320019040|gb|ADV94026.1| putative iron-sulfur scaffold protein [Bacillus subtilis BSn5]
gi|349596050|gb|AEP92237.1| conserved domain protein [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|349600304|gb|AEP88092.1| conserved domain protein [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|371569646|emb|CCF06496.1| Fe/S biogenesis protein nfuA [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|380500105|emb|CCG51143.1| Fe/S biogenesis protein nfuA [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|388473992|gb|EIM10726.1| (Fe-S)-binding protein [Bacillus atrophaeus C89]
gi|393806666|gb|EJD68010.1| iron-sulfur scaffold protein [Bacillus sp. 916]
gi|407076353|gb|EKE49337.1| (Fe-S)-binding protein [Bacillus amyloliquefaciens subsp. plantarum
M27]
gi|407962051|dbj|BAM55291.1| (Fe-S)-binding protein [Bacillus subtilis BEST7613]
gi|407966065|dbj|BAM59304.1| (Fe-S)-binding protein [Bacillus subtilis BEST7003]
gi|429488088|gb|AFZ92012.1| iron-sulfur scaffold protein [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|443345949|gb|ELS60011.1| iron-sulfur scaffold protein [Bacillus subtilis subsp. inaquosorum
KCTC 13429]
gi|449849399|gb|AGF26391.1| iron-sulfur scaffold protein [Bacillus amyloliquefaciens IT-45]
gi|452081098|emb|CCP22865.1| Putative nitrogen fixation protein yutI [Bacillus amyloliquefaciens
subsp. plantarum UCMB5036]
gi|452118809|gb|EME09203.1| nifU-like domain protein [Bacillus subtilis MB73/2]
Length = 78
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 44/57 (77%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
+ V VL+ +RP+L+ DGG+ ++V V++G+V ++L GACGSCPSST T+ GIER L
Sbjct: 8 EQVQEVLDKLRPFLLRDGGDCELVDVDEGIVKLRLLGACGSCPSSTITLKAGIERAL 64
>gi|418031576|ref|ZP_12670061.1| iron-sulfur scaffold protein [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|449095663|ref|YP_007428154.1| putative iron-sulfur scaffold protein [Bacillus subtilis XF-1]
gi|351472635|gb|EHA32748.1| iron-sulfur scaffold protein [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|449029578|gb|AGE64817.1| putative iron-sulfur scaffold protein [Bacillus subtilis XF-1]
Length = 86
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 44/57 (77%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
+ V VL+ +RP+L+ DGG+ ++V V++G+V ++L GACGSCPSST T+ GIER L
Sbjct: 16 EQVQEVLDKLRPFLLRDGGDCELVDVDEGIVKLRLLGACGSCPSSTITLKAGIERAL 72
>gi|154687334|ref|YP_001422495.1| hypothetical protein RBAM_029330 [Bacillus amyloliquefaciens FZB42]
gi|385266112|ref|ZP_10044199.1| NifU-like domain-containing protein [Bacillus sp. 5B6]
gi|387899822|ref|YP_006330118.1| thioredoxin-like protein [Bacillus amyloliquefaciens Y2]
gi|154353185|gb|ABS75264.1| YutI [Bacillus amyloliquefaciens FZB42]
gi|385150608|gb|EIF14545.1| NifU-like domain-containing protein [Bacillus sp. 5B6]
gi|387173932|gb|AFJ63393.1| thioredoxin-like protein [Bacillus amyloliquefaciens Y2]
Length = 86
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 44/57 (77%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
+ V VL+ +RP+L+ DGG+ ++V V++G+V ++L GACGSCPSST T+ GIER L
Sbjct: 16 EQVQEVLDKLRPFLLRDGGDCELVDVDEGIVKLRLLGACGSCPSSTITLKAGIERAL 72
>gi|237752984|ref|ZP_04583464.1| NifU family protein [Helicobacter winghamensis ATCC BAA-430]
gi|229375251|gb|EEO25342.1| NifU family protein [Helicobacter winghamensis ATCC BAA-430]
Length = 81
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 43/59 (72%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
K V+ ++ VRP LI DGGN+ ++ +E+G V V+L+GAC CPSST T+ GIER LK+
Sbjct: 11 KPVEASIDKVRPMLIKDGGNVTLIKIENGKVYVRLEGACKGCPSSTQTLKFGIERTLKD 69
>gi|345020858|ref|ZP_08784471.1| nitrogen fixation protein [Ornithinibacillus scapharcae TW25]
Length = 74
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVED-GVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V VL +RP+L+ DGG+++++ V+D G+V ++L GACG+CPSST T+ GIER L
Sbjct: 3 EQVQEVLNKLRPFLLRDGGDVELIDVDDDGIVLLRLMGACGNCPSSTITLKAGIERALMA 62
Query: 139 KFGDAIKDIRQVY 151
+ +K+I QV+
Sbjct: 63 EV-PGVKEIEQVF 74
>gi|23099811|ref|NP_693277.1| nitrogen fixation protein [Oceanobacillus iheyensis HTE831]
gi|22778042|dbj|BAC14312.1| nitrogen fixation protein (NifU protein) [Oceanobacillus iheyensis
HTE831]
Length = 74
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V VL +RP+L+ DGG+++++ V E+GVV ++L GACG+CPSST T+ GIER L
Sbjct: 3 EQVQEVLNKLRPFLLRDGGDVELIDVDEEGVVLLRLMGACGNCPSSTITLKAGIERALMA 62
Query: 139 KFGDAIKDIRQVY 151
+ +++I QV+
Sbjct: 63 EV-PGVREIEQVF 74
>gi|308174916|ref|YP_003921621.1| iron-sulfur scaffold protein [Bacillus amyloliquefaciens DSM 7]
gi|384160835|ref|YP_005542908.1| iron-sulfur scaffold protein [Bacillus amyloliquefaciens TA208]
gi|384165679|ref|YP_005547058.1| nitrogen fixation protein yutI [Bacillus amyloliquefaciens LL3]
gi|384169911|ref|YP_005551289.1| iron-sulfur scaffold protein [Bacillus amyloliquefaciens XH7]
gi|398306234|ref|ZP_10509820.1| (Fe-S)-binding protein [Bacillus vallismortis DV1-F-3]
gi|307607780|emb|CBI44151.1| putative iron-sulfur scaffold protein [Bacillus amyloliquefaciens
DSM 7]
gi|328554923|gb|AEB25415.1| iron-sulfur scaffold protein [Bacillus amyloliquefaciens TA208]
gi|328913234|gb|AEB64830.1| Putative nitrogen fixation protein yutI [Bacillus amyloliquefaciens
LL3]
gi|341829190|gb|AEK90441.1| putative iron-sulfur scaffold protein [Bacillus amyloliquefaciens
XH7]
Length = 78
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 44/57 (77%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
+ V VL+ +RP+L+ DGG+ ++V +++G+V ++L GACGSCPSST T+ GIER L
Sbjct: 8 EQVQEVLDKLRPFLLRDGGDCELVDIDEGIVKLRLLGACGSCPSSTITLKAGIERAL 64
>gi|195952454|ref|YP_002120744.1| nitrogen-fixing NifU domain-containing protein [Hydrogenobaculum
sp. Y04AAS1]
gi|452943291|ref|YP_007499456.1| nitrogen-fixing NifU domain protein [Hydrogenobaculum sp. HO]
gi|195932066|gb|ACG56766.1| nitrogen-fixing NifU domain protein [Hydrogenobaculum sp. Y04AAS1]
gi|452881709|gb|AGG14413.1| nitrogen-fixing NifU domain protein [Hydrogenobaculum sp. HO]
Length = 87
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Query: 78 TAKNVDLVLEDVRPYLIADGGNIDVVSVE-DGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
T + V+ L+++RP L DGG+I++VS+E DG V V+L GAC C ST T+ G+ER L
Sbjct: 5 TVEEVEEALDEIRPALRFDGGDIELVSIEEDGTVLVRLMGACSGCGMSTLTLKAGVERAL 64
Query: 137 KEKFGDAIKDIRQV 150
K+KF D IK+++ V
Sbjct: 65 KQKFPD-IKEVKDV 77
>gi|257790861|ref|YP_003181467.1| nitrogen-fixing NifU domain-containing protein [Eggerthella lenta
DSM 2243]
gi|317488428|ref|ZP_07946981.1| NifU-like domain-containing protein [Eggerthella sp. 1_3_56FAA]
gi|325831888|ref|ZP_08164985.1| NifU-like protein [Eggerthella sp. HGA1]
gi|257474758|gb|ACV55078.1| nitrogen-fixing NifU domain protein [Eggerthella lenta DSM 2243]
gi|316912472|gb|EFV34028.1| NifU-like domain-containing protein [Eggerthella sp. 1_3_56FAA]
gi|325486209|gb|EGC88661.1| NifU-like protein [Eggerthella sp. HGA1]
Length = 77
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+V VLE +RP L ADGG++ +V V EDGVVSV+LQGAC CP S T++ G+ER+LKE
Sbjct: 5 NDVAAVLELIRPSLQADGGDVRLVDVNEDGVVSVELQGACKGCPMSQMTLANGVERILKE 64
Query: 139 KF 140
+
Sbjct: 65 RV 66
>gi|406836083|ref|ZP_11095677.1| nitrogen-fixing NifU domain-containing protein [Schlesneria
paludicola DSM 18645]
Length = 290
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 69 LYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTM 128
L+ H DL + V LE VRPYL + GGN++++ +++G+V ++LQG+C CPSS T+
Sbjct: 81 LHELHPVDLVTR-VGRALEQVRPYLKSHGGNVELLEIDEGLVRLQLQGSCHGCPSSAMTL 139
Query: 129 SMGIERVLKEKFGDAI 144
M IE + E D +
Sbjct: 140 KMAIEEAISEHAPDVL 155
>gi|289578725|ref|YP_003477352.1| nitrogen-fixing NifU domain-containing protein [Thermoanaerobacter
italicus Ab9]
gi|289528438|gb|ADD02790.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter italicus
Ab9]
Length = 73
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
K V+ VLE +RP L ADGG+++++ V EDG+V ++L GACG CP +T T+ GIER +KE
Sbjct: 3 KRVEEVLELLRPSLQADGGDVELIDVTEDGIVKIRLTGACGGCPFATLTLKEGIERAIKE 62
Query: 139 KF 140
+
Sbjct: 63 EI 64
>gi|414161510|ref|ZP_11417770.1| hypothetical protein HMPREF9310_02144 [Staphylococcus simulans
ACS-120-V-Sch1]
gi|410876406|gb|EKS24317.1| hypothetical protein HMPREF9310_02144 [Staphylococcus simulans
ACS-120-V-Sch1]
Length = 80
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 42/56 (75%)
Query: 81 NVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
V +V+E +RP+L+ DGG+ ++ VEDG+V ++L GAC +CPSST T+ GIER L
Sbjct: 11 QVAVVIERLRPFLLRDGGDCTLIDVEDGIVKLQLHGACNTCPSSTITLKAGIERAL 66
>gi|403068019|ref|ZP_10909351.1| nitrogen fixation protein [Oceanobacillus sp. Ndiop]
Length = 74
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVED-GVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V VL +RP+L+ DGG+++++ V+D GVV ++L GACG+CPSST T+ GIER L
Sbjct: 3 EQVQEVLNKLRPFLLRDGGDVELIDVDDDGVVLLRLMGACGNCPSSTITLKAGIERALMA 62
Query: 139 KFGDAIKDIRQVY 151
+ +++I QV+
Sbjct: 63 EV-PGVREIEQVF 74
>gi|224476033|ref|YP_002633639.1| hypothetical protein Sca_0540 [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222420640|emb|CAL27454.1| hypothetical protein with NifU domain [Staphylococcus carnosus
subsp. carnosus TM300]
Length = 80
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 42/56 (75%)
Query: 81 NVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
V +V+E +RP+L+ DGG+ ++ VEDG+V ++L GAC +CPSST T+ GIER L
Sbjct: 11 QVAVVIERLRPFLLRDGGDCTLIDVEDGIVKLQLHGACNTCPSSTITLKAGIERAL 66
>gi|300087175|ref|YP_003757697.1| nitrogen-fixing NifU domain-containing protein [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299526908|gb|ADJ25376.1| nitrogen-fixing NifU domain protein [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 74
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V VLE VRP L ADGG++++VSV EDG+V+VKL G+C CP S T+ GIER+LK
Sbjct: 3 EKVKEVLEQVRPNLQADGGDVELVSVSEDGIVTVKLTGSCAGCPMSQMTLKNGIERILKR 62
Query: 139 KF 140
+
Sbjct: 63 EV 64
>gi|374320333|ref|YP_005073462.1| protein NifU [Paenibacillus terrae HPL-003]
gi|357199342|gb|AET57239.1| nifu [Paenibacillus terrae HPL-003]
Length = 79
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
++VD VL +RP+L DGG+ ++V V+DGV +K GAC CPS+T T+ GIER + E+
Sbjct: 9 EDVDDVLRRLRPFLNRDGGDAELVQVKDGVAKLKFLGACNGCPSTTITLKAGIERAIFEE 68
Query: 140 FGDAIKDIRQVY 151
D I ++ QV+
Sbjct: 69 V-DGIHEVVQVF 79
>gi|336323908|ref|YP_004603875.1| nitrogen-fixing NifU domain-containing protein [Flexistipes
sinusarabici DSM 4947]
gi|336107489|gb|AEI15307.1| nitrogen-fixing NifU domain-containing protein [Flexistipes
sinusarabici DSM 4947]
Length = 73
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 52/72 (72%), Gaps = 5/72 (6%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V+ VL+ VRP L ADGG+++++ V +DGVV V+L GACGSCP ST T+ GIE LKE
Sbjct: 3 ERVEEVLQKVRPSLQADGGDVELIDVSDDGVVKVQLTGACGSCPFSTMTLKHGIEMRLKE 62
Query: 139 KFGDAIKDIRQV 150
AI ++++V
Sbjct: 63 ----AIPEVKEV 70
>gi|386813085|ref|ZP_10100310.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386405355|dbj|GAB63191.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 72
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 44/61 (72%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
+ V+ L +RP L ADGG+I++V +E GVV V+L+GACG+CPS+ T+ G+E LKE+
Sbjct: 3 EKVEEALNHIRPALQADGGDIELVDIEGGVVKVRLRGACGTCPSALMTLKYGVEERLKEE 62
Query: 140 F 140
Sbjct: 63 I 63
>gi|334339956|ref|YP_004544936.1| nitrogen-fixing NifU domain-containing protein [Desulfotomaculum
ruminis DSM 2154]
gi|334091310|gb|AEG59650.1| nitrogen-fixing NifU domain protein [Desulfotomaculum ruminis DSM
2154]
Length = 74
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 85 VLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDA 143
VLE VRP+L DGG+++ V + E+GVV VKL+GACGSCP + T+ G+ER LK++ +
Sbjct: 8 VLEQVRPFLQRDGGDVEFVDMDENGVVKVKLKGACGSCPGALYTLKNGVERTLKQQVPEV 67
Query: 144 IKDIR 148
+ IR
Sbjct: 68 TEVIR 72
>gi|295107477|emb|CBL05020.1| Thioredoxin-like proteins and domains [Gordonibacter pamelaeae
7-10-1-b]
Length = 78
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 81 NVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
+V VLE +RP L ADGG++ V V EDGVVSV+LQGAC CP S T++ G+ER+LKE+
Sbjct: 6 DVAAVLELIRPSLQADGGDVRFVDVDEDGVVSVELQGACKGCPMSEMTLANGVERILKER 65
Query: 140 F 140
Sbjct: 66 V 66
>gi|257456257|ref|ZP_05621454.1| NifU-like domain protein [Treponema vincentii ATCC 35580]
gi|257446343|gb|EEV21389.1| NifU-like domain protein [Treponema vincentii ATCC 35580]
Length = 75
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
+T V L+ VRP+L ADGG+++ VS+ +DGVVSV+L+GACGSCP + T+ GIE
Sbjct: 2 VTVDEVKQALDVVRPHLQADGGDVEFVSLSDDGVVSVRLKGACGSCPVALMTLKSGIEAQ 61
Query: 136 LKEKFGDAIK 145
LKE + D K
Sbjct: 62 LKESYPDIKK 71
>gi|408356206|ref|YP_006844737.1| hypothetical protein AXY_08430 [Amphibacillus xylanus NBRC 15112]
gi|407726977|dbj|BAM46975.1| hypothetical protein AXY_08430 [Amphibacillus xylanus NBRC 15112]
Length = 73
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
+ V L +RP+L+ DGG++++V V DG+V ++L GACGSCPSS T+ GIER L
Sbjct: 3 EQVQEALNKLRPFLLRDGGDVELVEVNDGIVRLRLLGACGSCPSSMITLKAGIERALVSA 62
Query: 140 FGDAIKDIRQV 150
+++I Q+
Sbjct: 63 V-PGVREIEQI 72
>gi|51892183|ref|YP_074874.1| NifU-like nitrogen fixation protein [Symbiobacterium thermophilum
IAM 14863]
gi|51855872|dbj|BAD40030.1| NifU-like nitrogen fixation protein [Symbiobacterium thermophilum
IAM 14863]
Length = 77
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 49/71 (69%), Gaps = 4/71 (5%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
+ V+ L+ +RP + DGG +++V+VEDGV +++ GACG CP ST T+ MGIER ++++
Sbjct: 8 ERVERALDLIRPAIRMDGGEVELVAVEDGVARIRMVGACGGCPMSTMTLKMGIERAVRQQ 67
Query: 140 FGDAIKDIRQV 150
+ +IR V
Sbjct: 68 ----VPEIRAV 74
>gi|315283493|ref|ZP_07871670.1| nitrogen fixation protein NifU [Listeria marthii FSL S4-120]
gi|313612862|gb|EFR86827.1| nitrogen fixation protein NifU [Listeria marthii FSL S4-120]
Length = 78
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIER 134
+++ VD L+ RP+L+ DGG+ ++V V +DG+V +KL GAC +CPSS T+ MGIE
Sbjct: 3 EISYAEVDKALKKFRPFLVRDGGDYELVEVTQDGIVKIKLLGACETCPSSDMTLKMGIEL 62
Query: 135 VLKEKFGDAIKDIRQVY 151
L EK K++ QV+
Sbjct: 63 TLAEKI-IGFKEVVQVF 78
>gi|46908571|ref|YP_014960.1| NifU family protein [Listeria monocytogenes serotype 4b str. F2365]
gi|47092981|ref|ZP_00230761.1| NifU family protein [Listeria monocytogenes str. 4b H7858]
gi|217963499|ref|YP_002349177.1| hypothetical protein LMHCC_0201 [Listeria monocytogenes HCC23]
gi|226224948|ref|YP_002759055.1| NifU family protein [Listeria monocytogenes serotype 4b str. CLIP
80459]
gi|254825479|ref|ZP_05230480.1| NifU family protein [Listeria monocytogenes FSL J1-194]
gi|254853597|ref|ZP_05242945.1| NifU family protein [Listeria monocytogenes FSL R2-503]
gi|254933176|ref|ZP_05266535.1| NifU family protein [Listeria monocytogenes HPB2262]
gi|254994154|ref|ZP_05276344.1| NifU family protein [Listeria monocytogenes FSL J2-064]
gi|255521513|ref|ZP_05388750.1| NifU family protein [Listeria monocytogenes FSL J1-175]
gi|290894179|ref|ZP_06557149.1| NifU family protein [Listeria monocytogenes FSL J2-071]
gi|300765271|ref|ZP_07075256.1| NifU family protein [Listeria monocytogenes FSL N1-017]
gi|386009117|ref|YP_005927395.1| NifU family protein [Listeria monocytogenes L99]
gi|386027728|ref|YP_005948504.1| putative Fe-S scaffold cluster NifU protein [Listeria monocytogenes
M7]
gi|386733083|ref|YP_006206579.1| NifU family protein [Listeria monocytogenes 07PF0776]
gi|404281955|ref|YP_006682853.1| NifU family protein [Listeria monocytogenes SLCC2755]
gi|404287768|ref|YP_006694354.1| NifU family protein [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|404408776|ref|YP_006691491.1| NifU family protein [Listeria monocytogenes SLCC2376]
gi|405750741|ref|YP_006674207.1| NifU family protein [Listeria monocytogenes ATCC 19117]
gi|405753606|ref|YP_006677071.1| NifU family protein [Listeria monocytogenes SLCC2378]
gi|405756511|ref|YP_006679975.1| NifU family protein [Listeria monocytogenes SLCC2540]
gi|406705133|ref|YP_006755487.1| NifU family protein [Listeria monocytogenes L312]
gi|417318405|ref|ZP_12104988.1| NifU family protein [Listeria monocytogenes J1-220]
gi|422410666|ref|ZP_16487627.1| nitrogen fixation protein NifU [Listeria monocytogenes FSL F2-208]
gi|422810426|ref|ZP_16858837.1| thioredoxin-like protein [Listeria monocytogenes FSL J1-208]
gi|424715213|ref|YP_007015928.1| Putative nitrogen fixation protein YutI [Listeria monocytogenes
serotype 4b str. LL195]
gi|424824149|ref|ZP_18249162.1| Nitrogen-fixing NifU protein [Listeria monocytogenes str. Scott A]
gi|46881843|gb|AAT05137.1| NifU family protein [Listeria monocytogenes serotype 4b str. F2365]
gi|47018635|gb|EAL09388.1| NifU family protein [Listeria monocytogenes str. 4b H7858]
gi|217332769|gb|ACK38563.1| conserved domain protein [Listeria monocytogenes HCC23]
gi|225877410|emb|CAS06124.1| Putative NifU family protein [Listeria monocytogenes serotype 4b
str. CLIP 80459]
gi|258606971|gb|EEW19579.1| NifU family protein [Listeria monocytogenes FSL R2-503]
gi|290556242|gb|EFD89786.1| NifU family protein [Listeria monocytogenes FSL J2-071]
gi|293584734|gb|EFF96766.1| NifU family protein [Listeria monocytogenes HPB2262]
gi|293594721|gb|EFG02482.1| NifU family protein [Listeria monocytogenes FSL J1-194]
gi|300514092|gb|EFK41154.1| NifU family protein [Listeria monocytogenes FSL N1-017]
gi|307571927|emb|CAR85106.1| NifU family protein [Listeria monocytogenes L99]
gi|313607074|gb|EFR83599.1| nitrogen fixation protein NifU [Listeria monocytogenes FSL F2-208]
gi|328471461|gb|EGF42355.1| NifU family protein [Listeria monocytogenes J1-220]
gi|332312829|gb|EGJ25924.1| Nitrogen-fixing NifU protein [Listeria monocytogenes str. Scott A]
gi|336024309|gb|AEH93446.1| putative Fe-S scaffold cluster NifU protein [Listeria monocytogenes
M7]
gi|378751316|gb|EHY61906.1| thioredoxin-like protein [Listeria monocytogenes FSL J1-208]
gi|384391841|gb|AFH80911.1| NifU family protein [Listeria monocytogenes 07PF0776]
gi|404219941|emb|CBY71305.1| NifU family protein [Listeria monocytogenes ATCC 19117]
gi|404222806|emb|CBY74169.1| NifU family protein [Listeria monocytogenes SLCC2378]
gi|404225711|emb|CBY77073.1| NifU family protein [Listeria monocytogenes SLCC2540]
gi|404228590|emb|CBY49995.1| NifU family protein [Listeria monocytogenes SLCC2755]
gi|404242925|emb|CBY64325.1| NifU family protein [Listeria monocytogenes SLCC2376]
gi|404246697|emb|CBY04922.1| NifU family protein [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|406362163|emb|CBY68436.1| NifU family protein [Listeria monocytogenes L312]
gi|424014397|emb|CCO64937.1| Putative nitrogen fixation protein YutI [Listeria monocytogenes
serotype 4b str. LL195]
Length = 78
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIER 134
+++ VD L+ RP+L+ DGG+ +++ V +DGVV +KL GAC +CPSS T+ MGIE
Sbjct: 3 EISYAEVDKALKKFRPFLVRDGGDYELIEVTQDGVVKIKLLGACETCPSSDMTLKMGIEL 62
Query: 135 VLKEKFGDAIKDIRQVY 151
L EK K++ QV+
Sbjct: 63 TLAEKI-IGFKEVVQVF 78
>gi|253828131|ref|ZP_04871016.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|313142706|ref|ZP_07804899.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|253511537|gb|EES90196.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|313131737|gb|EFR49354.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
Length = 81
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 44/61 (72%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
K V++V++ VRP LI DGGN+ ++ +E+G V V+L+GAC CPSS+ T+ GIE LK +
Sbjct: 11 KPVEIVIDKVRPMLINDGGNVTLLKIENGKVYVRLEGACKGCPSSSKTLKFGIESALKNE 70
Query: 140 F 140
Sbjct: 71 I 71
>gi|167037171|ref|YP_001664749.1| NifU domain-containing protein [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|167040690|ref|YP_001663675.1| NifU domain-containing protein [Thermoanaerobacter sp. X514]
gi|256751269|ref|ZP_05492149.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter ethanolicus
CCSD1]
gi|300914731|ref|ZP_07132047.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter sp. X561]
gi|307724035|ref|YP_003903786.1| nitrogen-fixing NifU domain-containing protein [Thermoanaerobacter
sp. X513]
gi|320115589|ref|YP_004185748.1| nitrogen-fixing NifU domain-containing protein [Thermoanaerobacter
brockii subsp. finnii Ako-1]
gi|166854930|gb|ABY93339.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter sp. X514]
gi|166856005|gb|ABY94413.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|256749824|gb|EEU62848.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter ethanolicus
CCSD1]
gi|300889666|gb|EFK84812.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter sp. X561]
gi|307581096|gb|ADN54495.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter sp. X513]
gi|319928680|gb|ADV79365.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
Length = 73
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V+ VLE +RP L ADGG+++++ V EDG+V V+L GACG CP +T T+ GIER +KE
Sbjct: 3 ERVEEVLELLRPSLQADGGDVELIDVTEDGIVKVRLTGACGGCPFATLTLKEGIERAIKE 62
Query: 139 KF 140
+
Sbjct: 63 EI 64
>gi|381211734|ref|ZP_09918805.1| nitrogen fixation protein [Lentibacillus sp. Grbi]
Length = 74
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVED-GVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V VL +RP+L+ DGG+++++ V+D G V ++L GACG+CPSST T+ GIER L+
Sbjct: 3 EQVQEVLTKLRPFLLRDGGDVELIDVDDDGTVLIRLMGACGNCPSSTITLKAGIERALRS 62
Query: 139 KFGDAIKDIRQVY 151
+ + +I QV+
Sbjct: 63 EV-PGVTEIEQVF 74
>gi|340357770|ref|ZP_08680378.1| NifU family protein [Sporosarcina newyorkensis 2681]
gi|339616649|gb|EGQ21292.1| NifU family protein [Sporosarcina newyorkensis 2681]
Length = 79
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 42/52 (80%)
Query: 85 VLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
VL+ +RP+L+ DGG+ ++V +++G+V ++L GACG+CPSST T+ GIER L
Sbjct: 14 VLDKLRPFLLRDGGDCELVDIDEGIVKLRLLGACGTCPSSTITLKAGIERAL 65
>gi|417316184|ref|ZP_12102836.1| NifU family protein [Listeria monocytogenes J1816]
gi|328465264|gb|EGF36521.1| NifU family protein [Listeria monocytogenes J1816]
Length = 82
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIER 134
+++ VD L+ RP+L+ DGG+ +++ V +DGVV +KL GAC +CPSS T+ MGIE
Sbjct: 3 EISYAEVDKALKKFRPFLVRDGGDYELIEVTQDGVVKIKLLGACETCPSSDMTLKMGIEL 62
Query: 135 VLKEK 139
L EK
Sbjct: 63 TLAEK 67
>gi|291287157|ref|YP_003503973.1| nitrogen-fixing NifU domain-containing protein [Denitrovibrio
acetiphilus DSM 12809]
gi|290884317|gb|ADD68017.1| nitrogen-fixing NifU domain protein [Denitrovibrio acetiphilus DSM
12809]
Length = 75
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 51/73 (69%), Gaps = 5/73 (6%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V+ VL+ VRP L ADGG+I+++ V EDG+V V+L GACGSCP ST T+ G+E LK
Sbjct: 5 QRVEEVLDQVRPTLQADGGDIELLDVSEDGIVKVQLTGACGSCPFSTMTLKHGVEARLK- 63
Query: 139 KFGDAIKDIRQVY 151
D I ++++V
Sbjct: 64 ---DMIPEVKEVL 73
>gi|340618381|ref|YP_004736834.1| NifU-like protein [Zobellia galactanivorans]
gi|339733178|emb|CAZ96553.1| NifU-like protein [Zobellia galactanivorans]
Length = 304
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 58/99 (58%), Gaps = 2/99 (2%)
Query: 51 ETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVED--G 108
E AI A+ ++ S+P + D + + VD++ E V+P + +DGGNI S E+
Sbjct: 201 EDAIAATKEASDTTSAPTQATPELDDTSQQIVDILEEYVKPAVASDGGNILFQSYEEESK 260
Query: 109 VVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDI 147
V+V LQGAC CPSST T+ GIE +LK GD + ++
Sbjct: 261 TVNVILQGACSGCPSSTFTLKNGIETMLKNMMGDKVNEV 299
>gi|16804435|ref|NP_465920.1| hypothetical protein lmo2397 [Listeria monocytogenes EGD-e]
gi|47095874|ref|ZP_00233478.1| NifU family protein [Listeria monocytogenes str. 1/2a F6854]
gi|254827975|ref|ZP_05232662.1| NifU family protein [Listeria monocytogenes FSL N3-165]
gi|254913294|ref|ZP_05263306.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|254937675|ref|ZP_05269372.1| NifU family protein [Listeria monocytogenes F6900]
gi|284802839|ref|YP_003414704.1| hypothetical protein LM5578_2596 [Listeria monocytogenes 08-5578]
gi|284995980|ref|YP_003417748.1| hypothetical protein LM5923_2545 [Listeria monocytogenes 08-5923]
gi|386044699|ref|YP_005963504.1| thioredoxin-like protein [Listeria monocytogenes 10403S]
gi|386048059|ref|YP_005966391.1| NifU family protein [Listeria monocytogenes J0161]
gi|386051368|ref|YP_005969359.1| NifU family protein [Listeria monocytogenes FSL R2-561]
gi|386054588|ref|YP_005972146.1| NifU family protein [Listeria monocytogenes Finland 1998]
gi|404284890|ref|YP_006685787.1| NifU family protein [Listeria monocytogenes SLCC2372]
gi|404411639|ref|YP_006697227.1| NifU family protein [Listeria monocytogenes SLCC5850]
gi|404414418|ref|YP_006700005.1| NifU family protein [Listeria monocytogenes SLCC7179]
gi|405759446|ref|YP_006688722.1| NifU family protein [Listeria monocytogenes SLCC2479]
gi|16411885|emb|CAD00475.1| lmo2397 [Listeria monocytogenes EGD-e]
gi|47015751|gb|EAL06680.1| NifU family protein [Listeria monocytogenes str. 1/2a F6854]
gi|258600358|gb|EEW13683.1| NifU family protein [Listeria monocytogenes FSL N3-165]
gi|258610275|gb|EEW22883.1| NifU family protein [Listeria monocytogenes F6900]
gi|284058401|gb|ADB69342.1| hypothetical protein LM5578_2596 [Listeria monocytogenes 08-5578]
gi|284061447|gb|ADB72386.1| hypothetical protein LM5923_2545 [Listeria monocytogenes 08-5923]
gi|293591295|gb|EFF99629.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|345535050|gb|AEO04491.1| NifU family protein [Listeria monocytogenes J0161]
gi|345537933|gb|AEO07373.1| thioredoxin-like protein [Listeria monocytogenes 10403S]
gi|346425214|gb|AEO26739.1| NifU family protein [Listeria monocytogenes FSL R2-561]
gi|346647239|gb|AEO39864.1| NifU family protein [Listeria monocytogenes Finland 1998]
gi|404231465|emb|CBY52869.1| NifU family protein [Listeria monocytogenes SLCC5850]
gi|404234392|emb|CBY55795.1| NifU family protein [Listeria monocytogenes SLCC2372]
gi|404237328|emb|CBY58730.1| NifU family protein [Listeria monocytogenes SLCC2479]
gi|404240117|emb|CBY61518.1| NifU family protein [Listeria monocytogenes SLCC7179]
gi|441472175|emb|CCQ21930.1| Putative nitrogen fixation protein YutI [Listeria monocytogenes]
gi|441475313|emb|CCQ25067.1| Putative nitrogen fixation protein YutI [Listeria monocytogenes
N53-1]
Length = 78
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIER 134
+++ VD L+ RP+L+ DGG+ +++ V +DG+V +KL GAC +CPSS T+ MGIE
Sbjct: 3 EISYAEVDKALKKFRPFLVRDGGDYELIEVTQDGIVKIKLLGACETCPSSDMTLKMGIEL 62
Query: 135 VLKEKFGDAIKDIRQVY 151
L EK K++ QV+
Sbjct: 63 TLAEKI-IGFKEVVQVF 78
>gi|332798963|ref|YP_004460462.1| nitrogen-fixing NifU domain-containing protein [Tepidanaerobacter
acetatoxydans Re1]
gi|438002054|ref|YP_007271797.1| NifU-like domain protein [Tepidanaerobacter acetatoxydans Re1]
gi|332696698|gb|AEE91155.1| nitrogen-fixing NifU domain-containing protein [Tepidanaerobacter
acetatoxydans Re1]
gi|432178848|emb|CCP25821.1| NifU-like domain protein [Tepidanaerobacter acetatoxydans Re1]
Length = 74
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 53/73 (72%), Gaps = 3/73 (4%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVED--GVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
+ V++VL +RP L ADGG++++V V++ G+V V+L GACG CP +T T+ GIE LK
Sbjct: 3 EKVEVVLNKIRPSLQADGGDVELVDVDEVAGIVKVRLTGACGGCPFATMTLKNGIEEALK 62
Query: 138 EKFGDAIKDIRQV 150
E+ + +K+++QV
Sbjct: 63 EEIPE-VKEVQQV 74
>gi|256827631|ref|YP_003151590.1| thioredoxin-like protein [Cryptobacterium curtum DSM 15641]
gi|256583774|gb|ACU94908.1| thioredoxin-like protein [Cryptobacterium curtum DSM 15641]
Length = 75
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
++V VLE VRP L ADGG++ +V V EDG V+V+LQGAC CP S T++ GIER+LK+
Sbjct: 5 EDVAAVLELVRPSLQADGGDVRLVDVMEDGTVTVELQGACQGCPMSQMTLAHGIERILKD 64
Query: 139 KF 140
+
Sbjct: 65 RV 66
>gi|395211456|ref|ZP_10399339.1| nitrogen-fixing NifU domain-containing protein [Pontibacter sp.
BAB1700]
gi|394457746|gb|EJF11858.1| nitrogen-fixing NifU domain-containing protein [Pontibacter sp.
BAB1700]
Length = 204
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 48/81 (59%)
Query: 57 SNPSAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQG 116
+N A + S G SA + K DL+ VRP + DGGNI S +DGVV+V LQG
Sbjct: 108 ANKPATSTESNGEVSADDAAIAKKVTDLLENYVRPAVEQDGGNISFKSYKDGVVTVHLQG 167
Query: 117 ACGSCPSSTTTMSMGIERVLK 137
+C CPS+T T+ GIE +LK
Sbjct: 168 SCSGCPSATVTLKAGIENLLK 188
>gi|414155079|ref|ZP_11411395.1| Nitrogen-fixing NifU domain protein [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
gi|411453392|emb|CCO09299.1| Nitrogen-fixing NifU domain protein [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
Length = 74
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V VLE VRP+L DGG+++ V E+GVV VKL+GACGSCP + T+ GIER LK+
Sbjct: 3 EKVKEVLEQVRPFLQRDGGDVEFVDCDENGVVKVKLRGACGSCPGALYTLKNGIERALKQ 62
Query: 139 KF 140
+
Sbjct: 63 QI 64
>gi|149195565|ref|ZP_01872622.1| putative nitrogen-fixing protein NifU [Lentisphaera araneosa
HTCC2155]
gi|149141027|gb|EDM29423.1| putative nitrogen-fixing protein NifU [Lentisphaera araneosa
HTCC2155]
Length = 185
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDG-VVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
D++ E +RP L DGG +D++ + D V+SV+ QGACGSCPSSTT M IE +L+E+F
Sbjct: 114 DILDETIRPGLAMDGGGVDIIDLSDEMVLSVRYQGACGSCPSSTTGTLMAIENILQEQF 172
>gi|381179591|ref|ZP_09888441.1| nitrogen-fixing NifU domain protein [Treponema saccharophilum DSM
2985]
gi|380768538|gb|EIC02527.1| nitrogen-fixing NifU domain protein [Treponema saccharophilum DSM
2985]
Length = 87
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 47/69 (68%), Gaps = 5/69 (7%)
Query: 86 LEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
LE RP L ADGG+++ +S+ ED V ++L GACGSCP +T T+ MG+ER LK DA
Sbjct: 22 LEMFRPQLQADGGDMEYISIDEDLNVHLRLTGACGSCPMATMTLKMGVERYLK----DAC 77
Query: 145 KDIRQVYDE 153
D+R+V E
Sbjct: 78 PDVREVIQE 86
>gi|313673639|ref|YP_004051750.1| nitrogen-fixing nifu domain-containing protein [Calditerrivibrio
nitroreducens DSM 19672]
gi|312940395|gb|ADR19587.1| nitrogen-fixing NifU domain protein [Calditerrivibrio nitroreducens
DSM 19672]
Length = 75
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 51/72 (70%), Gaps = 5/72 (6%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V+ VL+ VRP L ADGG+++++ V +DGVV V+L GACGSCP ST T+ GIE LK
Sbjct: 5 ERVEEVLKKVRPALQADGGDVELLGVTDDGVVKVQLTGACGSCPFSTMTLKHGIEMRLK- 63
Query: 139 KFGDAIKDIRQV 150
D I +I++V
Sbjct: 64 ---DEIPEIKEV 72
>gi|344203208|ref|YP_004788351.1| nitrogen-fixing NifU domain-containing protein [Muricauda
ruestringensis DSM 13258]
gi|343955130|gb|AEM70929.1| nitrogen-fixing NifU domain-containing protein [Muricauda
ruestringensis DSM 13258]
Length = 307
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVED--GVVSVKLQGACGSCPSSTTTMSMGIE 133
D + + +D++ E V+P + +DGGNI S E+ G VSV LQGAC CPSST T+ GIE
Sbjct: 229 DTSLQIIDILEEYVKPAVASDGGNILFQSYEEQSGTVSVILQGACSGCPSSTFTLKNGIE 288
Query: 134 RVLKEKFGDAIKDI 147
+LK G+ IK++
Sbjct: 289 TMLKNMMGEKIKEV 302
>gi|75910444|ref|YP_324740.1| Fe-S cluster assembly protein NifU [Anabaena variabilis ATCC 29413]
gi|1236928|gb|AAA93019.1| NifU2 [Anabaena variabilis ATCC 29413]
gi|75704169|gb|ABA23845.1| Fe-S cluster assembly protein NifU [Anabaena variabilis ATCC 29413]
Length = 309
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%), Gaps = 3/77 (3%)
Query: 69 LYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTM 128
L + + L K +D E+VRP LIADGG+I++ V+ V V LQGACGSCPSST T+
Sbjct: 222 LTTVQKIALIQKVLD---EEVRPLLIADGGDIELYDVQGDNVQVVLQGACGSCPSSTATL 278
Query: 129 SMGIERVLKEKFGDAIK 145
+ +E L+E+ +++
Sbjct: 279 KVAVEAKLQERVSQSLR 295
>gi|301064688|ref|ZP_07205077.1| NifU-like protein [delta proteobacterium NaphS2]
gi|300441230|gb|EFK05606.1| NifU-like protein [delta proteobacterium NaphS2]
Length = 75
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 86 LEDVRPYLIADGGNIDVVSVE-DGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
LE VRP L ADGG++ +V V+ +G+V VKL GACG CP S T+ MGIE+VLK+
Sbjct: 11 LEKVRPSLQADGGDVQLVDVDANGLVKVKLTGACGGCPMSQMTLKMGIEKVLKQ 64
>gi|381183347|ref|ZP_09892089.1| hypothetical protein KKC_08617 [Listeriaceae bacterium TTU M1-001]
gi|380316749|gb|EIA20126.1| hypothetical protein KKC_08617 [Listeriaceae bacterium TTU M1-001]
Length = 112
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIER 134
+++ +VD L+ RPYL+ DGG+ +++ V +DG+V ++L GAC +CPSS T+ MGIE
Sbjct: 3 EISFDSVDKALQKFRPYLLRDGGDYELIDVTQDGIVKIRLLGACVTCPSSDMTLKMGIEL 62
Query: 135 VLKEK-FG 141
L EK FG
Sbjct: 63 TLSEKIFG 70
>gi|16801558|ref|NP_471826.1| hypothetical protein lin2496 [Listeria innocua Clip11262]
gi|422413907|ref|ZP_16490866.1| YutI [Listeria innocua FSL S4-378]
gi|422416878|ref|ZP_16493835.1| YutI [Listeria innocua FSL J1-023]
gi|423098538|ref|ZP_17086283.1| NifU-like protein [Listeria innocua ATCC 33091]
gi|16415018|emb|CAC97723.1| lin2496 [Listeria innocua Clip11262]
gi|313617409|gb|EFR89807.1| YutI [Listeria innocua FSL S4-378]
gi|313622571|gb|EFR92972.1| YutI [Listeria innocua FSL J1-023]
gi|370794996|gb|EHN62733.1| NifU-like protein [Listeria innocua ATCC 33091]
Length = 78
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVE-DGVVSVKLQGACGSCPSSTTTMSMGIER 134
+++ VD L+ RP+L+ DGG+ ++V V DG+V +KL GAC +CPSS T+ MGIE
Sbjct: 3 EISYAEVDKALKKFRPFLVRDGGDYELVEVTPDGIVKIKLLGACETCPSSDMTLKMGIEL 62
Query: 135 VLKEKFGDAIKDIRQVY 151
L EK K++ QV+
Sbjct: 63 TLAEKI-IGFKEVVQVF 78
>gi|392412459|ref|YP_006449066.1| thioredoxin-like protein [Desulfomonile tiedjei DSM 6799]
gi|390625595|gb|AFM26802.1| thioredoxin-like protein [Desulfomonile tiedjei DSM 6799]
Length = 73
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVE-DGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ + L+ VRP L ADGG+ ++V V +G+V ++L+GACG CP S T+ MGIER+LKE
Sbjct: 3 EEIQAALDLVRPQLQADGGDAEIVDVTPEGIVKLRLKGACGGCPMSQMTLKMGIERILKE 62
Query: 139 KFGDAIKDIRQV 150
+ A+K + V
Sbjct: 63 RV-PAVKSVEAV 73
>gi|281208054|gb|EFA82232.1| NIF system FeS cluster assembly domain-containing protein
[Polysphondylium pallidum PN500]
Length = 307
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ VRP L+ DGGNI + +DG+V VKLQG C SC SS T+ GIER+L +
Sbjct: 215 ELIETRVRPTLLDDGGNIQYLGFKDGIVLVKLQGTCSSCSSSQATLKGGIERMLMHWISE 274
Query: 143 AIKDIRQVYDEEVRETTVE 161
++ I V D+E+ +E
Sbjct: 275 -VRGIMAVTDDELDNLNLE 292
>gi|134300123|ref|YP_001113619.1| NifU domain-containing protein [Desulfotomaculum reducens MI-1]
gi|134052823|gb|ABO50794.1| nitrogen-fixing NifU domain protein [Desulfotomaculum reducens
MI-1]
Length = 74
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 86 LEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
LE VRP+L DGG+++ V E GVV VKL+GACGSCP + T+ GIERVLK++
Sbjct: 9 LEQVRPFLQRDGGDVEFVDCDEKGVVKVKLRGACGSCPGALYTLKNGIERVLKQQ 63
>gi|375013379|ref|YP_004990367.1| thioredoxin-like protein [Owenweeksia hongkongensis DSM 17368]
gi|359349303|gb|AEV33722.1| thioredoxin-like protein [Owenweeksia hongkongensis DSM 17368]
Length = 213
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 46/79 (58%)
Query: 72 AHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMG 131
A ++ K L+ E V+P + +DGGNI + EDG V V LQGAC CPSST T+ G
Sbjct: 133 AEWEEIEKKIASLLDEYVKPAVASDGGNIKFLKYEDGAVKVLLQGACSGCPSSTMTLKQG 192
Query: 132 IERVLKEKFGDAIKDIRQV 150
I+ +L+E I+ + V
Sbjct: 193 IQNLLQEMLPGQIRTVEAV 211
>gi|291279936|ref|YP_003496771.1| nitrogen-fixing NifU domain protein [Deferribacter desulfuricans
SSM1]
gi|290754638|dbj|BAI81015.1| nitrogen-fixing NifU domain protein [Deferribacter desulfuricans
SSM1]
Length = 75
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V VL VRP L ADGG+++++ V EDGVV V+L GACGSCP ST T+ GIE LKE
Sbjct: 5 ERVQEVLNQVRPGLQADGGDVELLDVTEDGVVKVQLTGACGSCPFSTMTLKHGIEMRLKE 64
>gi|339444625|ref|YP_004710629.1| thioredoxin-like protein [Eggerthella sp. YY7918]
gi|338904377|dbj|BAK44228.1| thioredoxin-like protein [Eggerthella sp. YY7918]
Length = 77
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+V VL+ +RP L ADGG++ +V V E+GVVSV+LQGAC CP S T++ G+ER+LKE
Sbjct: 5 NDVSAVLDLIRPSLQADGGDVRLVDVDENGVVSVELQGACKGCPMSQMTLANGVERILKE 64
Query: 139 KF 140
+
Sbjct: 65 RV 66
>gi|347549707|ref|YP_004856035.1| putative NifU protein [Listeria ivanovii subsp. ivanovii PAM 55]
gi|346982778|emb|CBW86802.1| Putative NifU protein [Listeria ivanovii subsp. ivanovii PAM 55]
Length = 78
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVE-DGVVSVKLQGACGSCPSSTTTMSMGIER 134
+++ VD L+ RP+L+ DGG+ ++V V DG V +KL GAC +CPSS T+ MGIE
Sbjct: 3 EISYAEVDKALKKFRPFLVRDGGDYELVEVTPDGTVKIKLLGACETCPSSVMTLKMGIEL 62
Query: 135 VLKEKFGDAIKDIRQVY 151
L EK K++ QV+
Sbjct: 63 TLAEKI-IGFKEVVQVF 78
>gi|427728484|ref|YP_007074721.1| Fe-S cluster assembly protein NifU [Nostoc sp. PCC 7524]
gi|427364403|gb|AFY47124.1| Fe-S cluster assembly protein NifU [Nostoc sp. PCC 7524]
Length = 300
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 60/104 (57%), Gaps = 6/104 (5%)
Query: 37 IKPKNSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIAD 96
+K KN+V + + + + A +G L + + L K +D E+VRP LIAD
Sbjct: 194 VKEKNAV---TNLNTNGVNPTKEIANSGQKRPLTNVQKIALIQKVLD---EEVRPVLIAD 247
Query: 97 GGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
GG++++ V+ +V V LQGACGSC SST T+ + IE L+++
Sbjct: 248 GGDVELYDVDGDIVKVVLQGACGSCSSSTATLKIAIESRLRDRI 291
>gi|255024382|ref|ZP_05296368.1| NifU family protein [Listeria monocytogenes FSL J1-208]
Length = 67
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIER 134
+++ VD L+ RP+L+ DGG+ +++ V +DGVV +KL GAC +CPSS T+ MGIE
Sbjct: 3 EISYAEVDKALKKFRPFLVRDGGDYELIEVTQDGVVKIKLLGACETCPSSDMTLKMGIEL 62
Query: 135 VLKEK 139
L EK
Sbjct: 63 TLAEK 67
>gi|20808161|ref|NP_623332.1| thioredoxin [Thermoanaerobacter tengcongensis MB4]
gi|20516751|gb|AAM24936.1| Thioredoxin-like proteins and domains [Thermoanaerobacter
tengcongensis MB4]
Length = 73
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V+ +L ++P L ADGG++++V V EDGVV VKL GACG CP +T T+ GIER +KE
Sbjct: 3 ERVEEILNLIKPSLQADGGDVELVDVTEDGVVKVKLTGACGGCPFATLTLKEGIERAIKE 62
Query: 139 KF 140
+
Sbjct: 63 EI 64
>gi|86134908|ref|ZP_01053490.1| NifU-like protein [Polaribacter sp. MED152]
gi|85821771|gb|EAQ42918.1| NifU-like protein [Polaribacter sp. MED152]
Length = 78
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 81 NVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
NV+ L+++RP+L++DGGNI ++S+ED +V V+LQGAC C + T+ G+E +K K+
Sbjct: 9 NVEKALDEIRPFLMSDGGNIKLLSIEDAIVKVQLQGACTGCSVNQMTLKNGVEATIK-KY 67
Query: 141 GDAIKDIRQV 150
I+ + V
Sbjct: 68 APQIEQVINV 77
>gi|383762818|ref|YP_005441800.1| iron-sulfur cluster assembly protein [Caldilinea aerophila DSM
14535 = NBRC 104270]
gi|381383086|dbj|BAL99902.1| iron-sulfur cluster assembly protein [Caldilinea aerophila DSM
14535 = NBRC 104270]
Length = 106
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 8/83 (9%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ + VL+ RP L DGG+++V+ V E+GV +K+ GAC CP S TM +GI+R+LKE
Sbjct: 11 QRIQQVLDAYRPNLYMDGGDVEVLKVDENGVAHLKMLGACIDCPISLLTMKLGIQRLLKE 70
Query: 139 KFGD-----AIKD--IRQVYDEE 154
F + AI D IR +YD E
Sbjct: 71 HFPEITGVHAITDVSIRDLYDRE 93
>gi|332982274|ref|YP_004463715.1| nitrogen-fixing NifU domain-containing protein [Mahella
australiensis 50-1 BON]
gi|332699952|gb|AEE96893.1| nitrogen-fixing NifU domain protein [Mahella australiensis 50-1
BON]
Length = 73
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V+ LE +RP L ADGG++++V V DGVV VKL GACG+CP + T+ GIE LKE
Sbjct: 3 EKVEAALEKIRPALKADGGDVELVDVASDGVVKVKLTGACGACPFALMTLKQGIEETLKE 62
>gi|220931159|ref|YP_002508067.1| nitrogen-fixing NifU domain-containing protein [Halothermothrix
orenii H 168]
gi|219992469|gb|ACL69072.1| nitrogen-fixing NifU domain protein [Halothermothrix orenii H 168]
Length = 74
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 48/68 (70%), Gaps = 3/68 (4%)
Query: 85 VLEDVRPYLIADGGNIDVVSVED--GVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+++ +RP L ADGG++ +V V+D G+V VKL GAC CP ST T+ GIERVLKEK
Sbjct: 8 IIDKIRPSLQADGGDVKLVDVDDEKGIVKVKLLGACQGCPMSTMTIKNGIERVLKEKV-P 66
Query: 143 AIKDIRQV 150
+K+++ V
Sbjct: 67 GVKEVKPV 74
>gi|333919642|ref|YP_004493223.1| Rieske family iron-sulfur cluster-binding protein [Amycolicicoccus
subflavus DQS3-9A1]
gi|333481863|gb|AEF40423.1| Rieske family iron-sulfur cluster-binding protein [Amycolicicoccus
subflavus DQS3-9A1]
Length = 302
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 39/52 (75%)
Query: 86 LEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
L+ VRPYL + GG++D++ +EDGVV ++ QG C SCPSST T+ + +E +K
Sbjct: 96 LDSVRPYLGSHGGDVDLIGIEDGVVHLRFQGTCKSCPSSTATLELAVEGAIK 147
>gi|310643918|ref|YP_003948676.1| protein NifU [Paenibacillus polymyxa SC2]
gi|309248868|gb|ADO58435.1| NifU-like protein [Paenibacillus polymyxa SC2]
gi|392304642|emb|CCI71005.1| Fe/S biogenesis protein nfuA [Paenibacillus polymyxa M1]
Length = 79
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 85 VLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
VL +RP+L+ DGG+ ++V VE+G+ ++ GAC CPS+T T+ + IER + E+ D I
Sbjct: 14 VLLKLRPFLLRDGGDAELVEVENGIAKLRFLGACNGCPSATITLKVAIERAILEEIDD-I 72
Query: 145 KDIRQVY 151
K++ QV+
Sbjct: 73 KEVVQVF 79
>gi|333999679|ref|YP_004532291.1| iron-sulfur cluster-binding protein, Rieske family [Treponema
primitia ZAS-2]
gi|333740023|gb|AEF85513.1| iron-sulfur cluster-binding protein, Rieske family [Treponema
primitia ZAS-2]
Length = 74
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
+ + V L L++VRP L DGG+++ VS+ +DG VS+KL GACGSCP + T+ MGIE
Sbjct: 1 MLEEQVKLALDNVRPSLQNDGGDVEFVSLSDDGTVSLKLTGACGSCPMAQMTLKMGIENY 60
Query: 136 LKEKF 140
LK++
Sbjct: 61 LKKEI 65
>gi|442749587|gb|JAA66953.1| Putative nifu-like domain-containing-containing protein [Ixodes
ricinus]
Length = 260
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I + EDGVV +KLQG+C CPSS+ T+ GI+ +L + +
Sbjct: 168 ELIETRIRPTVQEDGGDIVYMGFEDGVVKLKLQGSCTGCPSSSVTLKAGIQNML-QFYVP 226
Query: 143 AIKDIRQVYDEEVRETTVEVSAL 165
+KD+ QV DE + T E L
Sbjct: 227 EVKDVEQVLDEADKVATKEFEKL 249
>gi|83815451|ref|YP_444955.1| hypothetical protein SRU_0820 [Salinibacter ruber DSM 13855]
gi|294506813|ref|YP_003570871.1| hypothetical protein SRM_00998 [Salinibacter ruber M8]
gi|83756845|gb|ABC44958.1| conserved domain protein [Salinibacter ruber DSM 13855]
gi|294343141|emb|CBH23919.1| conserved hypothetical protein [Salinibacter ruber M8]
Length = 101
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 6/82 (7%)
Query: 57 SNPSAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQ 115
S+P GSSP H N++ L+ +RPYL+ADGG++ +++V D VV ++L
Sbjct: 7 SSPDTEDGSSP-----HIDPELRDNIEEALDTIRPYLMADGGSVRLLNVTADYVVELELL 61
Query: 116 GACGSCPSSTTTMSMGIERVLK 137
GACGSCP ST T+ GIE+ LK
Sbjct: 62 GACGSCPMSTMTLRAGIEQALK 83
>gi|297544959|ref|YP_003677261.1| nitrogen-fixing NifU domain-containing protein [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
gi|296842734|gb|ADH61250.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 73
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V+ VLE +RP L ADGG+++++ V +DG+V ++L GACG CP +T T+ GIER +KE
Sbjct: 3 ERVEEVLELLRPSLQADGGDVELIDVTKDGIVKIRLTGACGGCPFATLTLKEGIERAIKE 62
Query: 139 KF 140
+
Sbjct: 63 EI 64
>gi|116873760|ref|YP_850541.1| NifU family protein [Listeria welshimeri serovar 6b str. SLCC5334]
gi|116742638|emb|CAK21762.1| NifU family protein [Listeria welshimeri serovar 6b str. SLCC5334]
Length = 78
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 81 NVDLVLEDVRPYLIADGGNIDVVSVE-DGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
VD L+ RP+L+ DGG+ +++ V DG+V +KL GAC +CPSS T+ MGIE L EK
Sbjct: 8 EVDKALKKFRPFLVRDGGDYELIEVTPDGIVKIKLLGACETCPSSDMTLKMGIELTLAEK 67
Query: 140 FGDAIKDIRQVY 151
K++ QV+
Sbjct: 68 I-IGFKEVVQVF 78
>gi|172035474|ref|YP_001801975.1| iron-sulfur cluster assembly protein [Cyanothece sp. ATCC 51142]
gi|354555563|ref|ZP_08974864.1| Fe-S cluster assembly protein NifU [Cyanothece sp. ATCC 51472]
gi|171696928|gb|ACB49909.1| iron-sulfur cluster assembly protein [Cyanothece sp. ATCC 51142]
gi|353552622|gb|EHC22017.1| Fe-S cluster assembly protein NifU [Cyanothece sp. ATCC 51472]
Length = 293
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 40/53 (75%)
Query: 87 EDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
E++RP+L DGG+++++ +E +V V LQGACGSC SST T+ GIE LKE+
Sbjct: 231 EEIRPFLAKDGGDLELIDIEGDLVKVTLQGACGSCASSTATLKGGIEARLKER 283
>gi|57864812|gb|AAW56987.1| nitrogen fixation protein U [Cyanothece sp. ATCC 51142]
Length = 285
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 40/53 (75%)
Query: 87 EDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
E++RP+L DGG+++++ +E +V V LQGACGSC SST T+ GIE LKE+
Sbjct: 223 EEIRPFLAKDGGDLELIDIEGDLVKVTLQGACGSCASSTATLKGGIEARLKER 275
>gi|241156886|ref|XP_002407882.1| conserved hypothetical protein [Ixodes scapularis]
gi|215494245|gb|EEC03886.1| conserved hypothetical protein [Ixodes scapularis]
Length = 260
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I + EDGVV +KLQG+C CPSS+ T+ GI+ +L + +
Sbjct: 168 ELIETRIRPTVQEDGGDIVYMGFEDGVVKLKLQGSCTGCPSSSVTLKAGIQNML-QFYVP 226
Query: 143 AIKDIRQVYDEEVRETTVEVSAL 165
+KD+ QV DE + T E L
Sbjct: 227 EVKDVEQVLDEADKVATKEFEKL 249
>gi|327402876|ref|YP_004343714.1| nitrogen-fixing NifU domain-containing protein [Fluviicola
taffensis DSM 16823]
gi|327318384|gb|AEA42876.1| nitrogen-fixing NifU domain-containing protein [Fluviicola
taffensis DSM 16823]
Length = 201
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 6/84 (7%)
Query: 70 YSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMS 129
Y+ ++D ++ L+ E VRP + DGG ID V E+G V+V L+GAC CPSST T+
Sbjct: 122 YAPSEYDDAIRS--LLDEYVRPAVEGDGGAIDFVGFEEGTVTVALRGACSGCPSSTATLK 179
Query: 130 MGIERVLKEKFGDAIKDIRQVYDE 153
GIE +LK+ + D+++V E
Sbjct: 180 GGIENLLKQH----LPDVKEVVAE 199
>gi|374320364|ref|YP_005073493.1| protein NifU [Paenibacillus terrae HPL-003]
gi|357199373|gb|AET57270.1| nifu [Paenibacillus terrae HPL-003]
Length = 79
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 VLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
VL +RP+L+ DGG+ ++V VE+G+ ++ GAC CPS+T T+ IER + E+ D I
Sbjct: 14 VLLKLRPFLLRDGGDAELVEVENGIAKLRFLGACNGCPSATITLKAAIERAILEEIED-I 72
Query: 145 KDIRQVY 151
K++ QV+
Sbjct: 73 KEVVQVF 79
>gi|17228950|ref|NP_485498.1| nitrogen fixation protein [Nostoc sp. PCC 7120]
gi|128316|sp|P20628.1|NIFU_NOSS1 RecName: Full=Nitrogen fixation protein NifU
gi|97707|pir||D34443 nitrogen fixation protein nifU - Anabaena sp
gi|142038|gb|AAA22007.1| nifU [Nostoc sp. PCC 7120]
gi|17130802|dbj|BAB73412.1| nitrogen fixation protein [Nostoc sp. PCC 7120]
Length = 300
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 57/103 (55%), Gaps = 9/103 (8%)
Query: 38 KPKNSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADG 97
K ++ K GS T I S P L + + L K +D E+VRP LIADG
Sbjct: 198 KAATNLNNKGGSKPTNIPNSGQKRP------LTNVQKIALIQKVLD---EEVRPVLIADG 248
Query: 98 GNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
G++++ V+ +V V LQGACGSC SST T+ + IE L+++
Sbjct: 249 GDVELYDVDGDIVKVVLQGACGSCSSSTATLKIAIESRLRDRI 291
>gi|261329222|emb|CBH12201.1| HIRA-interacting protein 5, putative [Trypanosoma brucei gambiense
DAL972]
Length = 280
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 9/85 (10%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP L ADGGN+ +S++DG V V L+GAC SCPSS T+ GIER+L +
Sbjct: 185 ELLSARIRPLLRADGGNVRYISMDDGTVFVLLEGACKSCPSSGVTLKNGIERMLMHWIPE 244
Query: 143 AIKDIRQVYDEEVRETTVEVSALLL 167
+ EV+E T E+++ LL
Sbjct: 245 VV---------EVQECTDEMASDLL 260
>gi|72391004|ref|XP_845796.1| HIRA-interacting protein 5 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62176423|gb|AAX70531.1| HIRA-interacting protein 5, putative [Trypanosoma brucei]
gi|70802332|gb|AAZ12237.1| HIRA-interacting protein 5, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 280
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 9/85 (10%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP L ADGGN+ +S++DG V V L+GAC SCPSS T+ GIER+L +
Sbjct: 185 ELLSARIRPLLRADGGNVRYISMDDGTVFVLLEGACKSCPSSGVTLKNGIERMLMHWIPE 244
Query: 143 AIKDIRQVYDEEVRETTVEVSALLL 167
+ EV+E T E+++ LL
Sbjct: 245 VV---------EVQECTDEMASDLL 260
>gi|312144147|ref|YP_003995593.1| nitrogen-fixing NifU domain-containing protein [Halanaerobium
hydrogeniformans]
gi|311904798|gb|ADQ15239.1| nitrogen-fixing NifU domain protein [Halanaerobium
hydrogeniformans]
Length = 73
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 47/66 (71%), Gaps = 2/66 (3%)
Query: 86 LEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
L+ +RP L ADGG++++V V E+G+V VKL GAC CP ST T+ GIER LK+ D +
Sbjct: 9 LDKIRPSLQADGGDVELVEVTEEGIVKVKLLGACSGCPMSTLTIKNGIERTLKQNV-DGV 67
Query: 145 KDIRQV 150
K+++ V
Sbjct: 68 KEVQPV 73
>gi|75910119|ref|YP_324415.1| Fe-S cluster assembly protein NifU [Anabaena variabilis ATCC 29413]
gi|7387938|sp|Q43885.1|NIFU_ANAAZ RecName: Full=Nitrogen fixation protein NifU
gi|762779|gb|AAA87250.1| NifU gene product [Trichormus azollae]
gi|75703844|gb|ABA23520.1| Fe-S cluster assembly protein NifU [Anabaena variabilis ATCC 29413]
Length = 300
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 57/103 (55%), Gaps = 9/103 (8%)
Query: 38 KPKNSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADG 97
K ++ K GS T I S P L + + L K +D E+VRP LIADG
Sbjct: 198 KAATNLNNKGGSKPTNIPNSGQKRP------LTNVQKIALIQKVLD---EEVRPVLIADG 248
Query: 98 GNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
G++++ V+ +V V LQGACGSC SST T+ + IE L+++
Sbjct: 249 GDVELYDVDGDIVKVVLQGACGSCSSSTATLKIAIESRLRDRI 291
>gi|258514732|ref|YP_003190954.1| nitrogen-fixing NifU domain-containing protein [Desulfotomaculum
acetoxidans DSM 771]
gi|257778437|gb|ACV62331.1| nitrogen-fixing NifU domain protein [Desulfotomaculum acetoxidans
DSM 771]
Length = 73
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V VL VRPYL DGG++++V + DG+V VKL+GAC CP + T+ GIERVLK+
Sbjct: 3 EKVKEVLGKVRPYLQRDGGDVELVDITADGIVRVKLKGACSGCPGALITLKQGIERVLKQ 62
Query: 139 KF 140
+
Sbjct: 63 EI 64
>gi|315304549|ref|ZP_07874802.1| nitrogen fixation protein NifU [Listeria ivanovii FSL F6-596]
gi|313627083|gb|EFR95963.1| nitrogen fixation protein NifU [Listeria ivanovii FSL F6-596]
Length = 78
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVE-DGVVSVKLQGACGSCPSSTTTMSMGIER 134
+++ VD L+ RP+L+ DGG+ ++V V DG V +KL GAC +CPSS T+ MGIE
Sbjct: 3 EISYAEVDKALKKFRPFLVRDGGDYELVEVTPDGTVKIKLLGACETCPSSDMTLKMGIEL 62
Query: 135 VLKEKFGDAIKDIRQVY 151
L EK K++ QV+
Sbjct: 63 TLSEKI-IGFKEVVQVF 78
>gi|313206297|ref|YP_004045474.1| nitrogen-fixing nifu domain-containing protein [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|383485604|ref|YP_005394516.1| nitrogen-fixing nifu domain protein [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|386321717|ref|YP_006017879.1| thioredoxin-like protein [Riemerella anatipestifer RA-GD]
gi|416110606|ref|ZP_11592150.1| Nitrogen-fixing NifU, C-terminal [Riemerella anatipestifer RA-YM]
gi|442314513|ref|YP_007355816.1| Thioredoxin-like protein and domains [Riemerella anatipestifer
RA-CH-2]
gi|312445613|gb|ADQ81968.1| nitrogen-fixing NifU domain protein [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|315023020|gb|EFT36033.1| Nitrogen-fixing NifU, C-terminal [Riemerella anatipestifer RA-YM]
gi|325336260|gb|ADZ12534.1| Thioredoxin-like protein [Riemerella anatipestifer RA-GD]
gi|380460289|gb|AFD55973.1| nitrogen-fixing nifu domain protein [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|441483436|gb|AGC40122.1| Thioredoxin-like protein and domains [Riemerella anatipestifer
RA-CH-2]
Length = 78
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 41/58 (70%)
Query: 82 VDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
V+ LE +RP+L DGG+I+++ +ED VV VKL G C CP S +TM +G+E +KEK
Sbjct: 10 VENALESIRPFLNKDGGDIELIKIEDTVVYVKLLGNCSGCPVSFSTMKLGVENTVKEK 67
>gi|289435662|ref|YP_003465534.1| NifU family protein [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|422419961|ref|ZP_16496916.1| nitrogen fixation protein NifU [Listeria seeligeri FSL N1-067]
gi|422423109|ref|ZP_16500062.1| nitrogen fixation protein NifU [Listeria seeligeri FSL S4-171]
gi|289171906|emb|CBH28452.1| NifU family protein [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|313632102|gb|EFR99193.1| nitrogen fixation protein NifU [Listeria seeligeri FSL N1-067]
gi|313636487|gb|EFS02228.1| nitrogen fixation protein NifU [Listeria seeligeri FSL S4-171]
Length = 78
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVE-DGVVSVKLQGACGSCPSSTTTMSMGIER 134
+++ VD L+ RP+L+ DGG+ ++V V DG V +KL GAC +CPSS T+ MGIE
Sbjct: 3 EISYAEVDKALKKFRPFLVRDGGDYELVEVTPDGTVKIKLLGACETCPSSDMTLKMGIEL 62
Query: 135 VLKEKFGDAIKDIRQVY 151
L EK K++ QV+
Sbjct: 63 TLAEKI-IGFKEVVQVF 78
>gi|407451848|ref|YP_006723573.1| thioredoxin-like protein [Riemerella anatipestifer RA-CH-1]
gi|403312832|gb|AFR35673.1| Thioredoxin-like protein [Riemerella anatipestifer RA-CH-1]
Length = 78
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 41/58 (70%)
Query: 82 VDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
V+ LE +RP+L DGG+I+++ +ED VV VKL G C CP S +TM +G+E +KEK
Sbjct: 10 VENALESIRPFLNKDGGDIELIKIEDTVVYVKLLGNCSGCPVSFSTMKLGVENTVKEK 67
>gi|340054523|emb|CCC48821.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 279
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 9/85 (10%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP L ADGGN+ + ++DG V V L+GAC SCPSS+ T+ GIER+L +
Sbjct: 185 ELLATRIRPLLRADGGNVRYIDMDDGTVFVLLEGACKSCPSSSVTLKSGIERMLMHWIPE 244
Query: 143 AIKDIRQVYDEEVRETTVEVSALLL 167
+ EV+E T E+++ LL
Sbjct: 245 VV---------EVQECTEEMASDLL 260
>gi|257064210|ref|YP_003143882.1| thioredoxin-like protein [Slackia heliotrinireducens DSM 20476]
gi|256791863|gb|ACV22533.1| thioredoxin-like protein [Slackia heliotrinireducens DSM 20476]
Length = 76
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 51/72 (70%), Gaps = 2/72 (2%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ ++ VLE +RP L ADGG++++V V +DGVV+V L GAC CP S T++ G+ RVLKE
Sbjct: 6 ERIERVLELIRPSLQADGGDLELVDVGDDGVVTVHLTGACNGCPLSQLTLANGVRRVLKE 65
Query: 139 KFGDAIKDIRQV 150
+ ++ D+R V
Sbjct: 66 RV-PSVTDVRAV 76
>gi|119509287|ref|ZP_01628437.1| nitrogen fixation protein [Nodularia spumigena CCY9414]
gi|119466129|gb|EAW47016.1| nitrogen fixation protein [Nodularia spumigena CCY9414]
Length = 312
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 9/91 (9%)
Query: 49 SHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDG 108
+H A+ S S P L + + L K +D E+VRP LIADGG++++ VE
Sbjct: 219 THSVAVANSQQSKP------LTNVQRIALIQKVLD---EEVRPVLIADGGDVELYDVEGD 269
Query: 109 VVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
V V LQGACGSC SST T+ + IE L+++
Sbjct: 270 KVKVVLQGACGSCSSSTATLKIAIEARLQDR 300
>gi|194334614|ref|YP_002016474.1| nitrogen-fixing NifU domain-containing protein [Prosthecochloris
aestuarii DSM 271]
gi|194312432|gb|ACF46827.1| nitrogen-fixing NifU domain protein [Prosthecochloris aestuarii DSM
271]
Length = 86
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 86 LEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
LEDVRPYL ADGG+ +V + +D VV VKL GACGSCP ST T+ G+E+ +K+
Sbjct: 22 LEDVRPYLQADGGDCQLVGITKDMVVDVKLLGACGSCPMSTLTLRAGVEQAVKKAI 77
>gi|328872467|gb|EGG20834.1| NIF system FeS cluster assembly domain-containing protein
[Dictyostelium fasciculatum]
Length = 313
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP L+ DGGNI + +DG+V VKLQG C SC SS T+ GIER+L +
Sbjct: 222 ELIETRIRPTLLDDGGNIQYLGFKDGIVLVKLQGTCSSCSSSQATLKGGIERMLMHWISE 281
Query: 143 AIKDIRQVYDEEVRETTVE 161
++ I V D+E+ + ++
Sbjct: 282 -VRGIMAVTDDELDKLNLD 299
>gi|117924033|ref|YP_864650.1| NifU domain-containing protein [Magnetococcus marinus MC-1]
gi|117607789|gb|ABK43244.1| nitrogen-fixing NifU domain protein [Magnetococcus marinus MC-1]
Length = 76
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 85 VLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
VL ++RP L DGG+++ V + ED VV V+L+GACGSCP + T+ GIER++KE+
Sbjct: 8 VLAEIRPMLQRDGGDVEFVDLTEDNVVQVRLRGACGSCPGAMMTLKGGIERLMKERI 64
>gi|206890081|ref|YP_002249266.1| thioredoxin [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206742019|gb|ACI21076.1| thioredoxin family protein [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 74
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 43/59 (72%)
Query: 82 VDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
V+ VL +R L+ADGGNID+V ++D +V VKL+GACG+CP +T T+ +E+ LK +
Sbjct: 7 VEQVLGKIRVGLMADGGNIDLVDIKDNIVYVKLKGACGTCPMATLTLKNWVEKTLKSEI 65
>gi|405983718|ref|ZP_11042023.1| hypothetical protein HMPREF9451_01135 [Slackia piriformis YIT
12062]
gi|404388533|gb|EJZ83615.1| hypothetical protein HMPREF9451_01135 [Slackia piriformis YIT
12062]
Length = 76
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V VL+ +RP L ADGG++ +V V EDGVV V+LQGAC CP S T++ G+ER+LKE
Sbjct: 6 EQVSRVLDLIRPSLQADGGDVALVDVQEDGVVVVELQGACKGCPMSQMTLANGVERILKE 65
Query: 139 KF 140
Sbjct: 66 HV 67
>gi|406674168|ref|ZP_11081379.1| hypothetical protein HMPREF9700_01921 [Bergeyella zoohelcum CCUG
30536]
gi|423316544|ref|ZP_17294449.1| hypothetical protein HMPREF9699_01020 [Bergeyella zoohelcum ATCC
43767]
gi|405583594|gb|EKB57534.1| hypothetical protein HMPREF9699_01020 [Bergeyella zoohelcum ATCC
43767]
gi|405584579|gb|EKB58469.1| hypothetical protein HMPREF9700_01921 [Bergeyella zoohelcum CCUG
30536]
Length = 81
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
LT K V LE +RP+L DGG+I++V +E+ V VK QG C CP + +TM +G+E +
Sbjct: 6 LTQK-VQEALESIRPFLNRDGGDIELVKIEEHKVWVKFQGNCVGCPMNFSTMKLGVENTI 64
Query: 137 KEKFGDAIKDIRQVYDEE 154
K +F I D+ + +EE
Sbjct: 65 K-QFAPEITDVISIEEEE 81
>gi|269216053|ref|ZP_06159907.1| NifU family protein [Slackia exigua ATCC 700122]
gi|402828510|ref|ZP_10877397.1| NifU-like protein [Slackia sp. CM382]
gi|269130312|gb|EEZ61390.1| NifU family protein [Slackia exigua ATCC 700122]
gi|402286318|gb|EJU34793.1| NifU-like protein [Slackia sp. CM382]
Length = 76
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIE 133
++ K V VL+ VRP L ADGG++++V + +DG+V V+LQGAC C S+ T++ G+E
Sbjct: 1 MEIDKKRVSRVLDMVRPSLQADGGDLELVDITDDGIVRVRLQGACNGCALSSLTIANGVE 60
Query: 134 RVLKE 138
R+LKE
Sbjct: 61 RILKE 65
>gi|302342797|ref|YP_003807326.1| nitrogen-fixing NifU domain-containing protein [Desulfarculus
baarsii DSM 2075]
gi|301639410|gb|ADK84732.1| nitrogen-fixing NifU domain protein [Desulfarculus baarsii DSM
2075]
Length = 73
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 86 LEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
L+ +RP L DGG++ +V V +DGVV V+LQGAC CP S T+ MGIE+VLK+
Sbjct: 9 LDKIRPALQKDGGDVKLVDVSDDGVVKVQLQGACHGCPMSQMTLKMGIEKVLKQ 62
>gi|359409335|ref|ZP_09201803.1| thioredoxin-like protein [SAR116 cluster alpha proteobacterium
HIMB100]
gi|356676088|gb|EHI48441.1| thioredoxin-like protein [SAR116 cluster alpha proteobacterium
HIMB100]
Length = 183
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 50/76 (65%), Gaps = 5/76 (6%)
Query: 76 DLTAKNVDLVLED-VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
D T + + +L+ VRP + DGG+I S EDGVV+++++GAC CPSST T+ MGIE
Sbjct: 107 DETVQQIKHLLDTRVRPAVAMDGGDITFHSFEDGVVTLQMRGACQGCPSSTATLKMGIEN 166
Query: 135 VLKEKFGDAIKDIRQV 150
+L+ I ++R+V
Sbjct: 167 MLRHY----IPEVREV 178
>gi|326403969|ref|YP_004284051.1| hypothetical protein ACMV_18220 [Acidiphilium multivorum AIU301]
gi|325050831|dbj|BAJ81169.1| hypothetical protein ACMV_18220 [Acidiphilium multivorum AIU301]
Length = 185
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
VRP + DGG+I DG+VS+ +QGAC CPSST T+ MGIE +LK + +K +R
Sbjct: 123 VRPAVAGDGGDIVFRGFRDGIVSLHMQGACSGCPSSTATLKMGIENLLKH-YVPEVKSVR 181
Query: 149 QV 150
QV
Sbjct: 182 QV 183
>gi|374813230|ref|ZP_09716967.1| iron-sulfur cluster-binding protein, Rieske family [Treponema
primitia ZAS-1]
Length = 74
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
+ + V + L++VRP L DGG+++ VS+ +DG+VS+KL GACG+CP + T+ MGIE
Sbjct: 1 MLEEQVKIALDNVRPSLQNDGGDVEFVSLSDDGIVSLKLTGACGTCPMAQMTLKMGIENY 60
Query: 136 LKEK 139
LK++
Sbjct: 61 LKKE 64
>gi|406907827|gb|EKD48534.1| Nitrogen-fixing NifU protein [uncultured bacterium]
Length = 100
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 53/81 (65%), Gaps = 8/81 (9%)
Query: 79 AKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
A+ ++ L+++RPYL + GG+I V+SV+D + VK +GAC CP S T+ +G+E +KE
Sbjct: 19 AQTIEKALDEIRPYLHSHGGDITVMSVQDSKLYVKFKGACVGCPISLYTLKLGVEEKIKE 78
Query: 139 KFGDAIKDIRQV----YDEEV 155
+ I +I+QV +D EV
Sbjct: 79 R----IPEIKQVIAVEHDHEV 95
>gi|298528227|ref|ZP_07015631.1| nitrogen-fixing NifU domain protein [Desulfonatronospira
thiodismutans ASO3-1]
gi|298511879|gb|EFI35781.1| nitrogen-fixing NifU domain protein [Desulfonatronospira
thiodismutans ASO3-1]
Length = 73
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V VLE +RP L ADGG++++V V ED VV V+LQGAC CP S T+ GIER++ +
Sbjct: 3 EQVQEVLEKIRPSLQADGGDVELVEVTEDNVVKVQLQGACKGCPMSQMTLKNGIERLIMQ 62
Query: 139 KF 140
+
Sbjct: 63 EL 64
>gi|148260770|ref|YP_001234897.1| NifU domain-containing protein [Acidiphilium cryptum JF-5]
gi|338984105|ref|ZP_08633212.1| NifU domain-containing protein [Acidiphilium sp. PM]
gi|146402451|gb|ABQ30978.1| nitrogen-fixing NifU domain protein [Acidiphilium cryptum JF-5]
gi|338206968|gb|EGO94998.1| NifU domain-containing protein [Acidiphilium sp. PM]
Length = 185
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
VRP + DGG+I DG+VS+ +QGAC CPSST T+ MGIE +LK + +K +R
Sbjct: 123 VRPAVAGDGGDIVFRGFRDGIVSLHMQGACSGCPSSTATLKMGIENLLKH-YVPEVKSVR 181
Query: 149 QV 150
QV
Sbjct: 182 QV 183
>gi|836637|emb|CAA83509.1| nifU [Nostoc sp. PCC 6720]
gi|1091584|prf||2021269A dinitrogenase reductase
Length = 87
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 63 AGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCP 122
+G L + + L K +D E+VRP LIADGG++++ V+ +V V LQGACGSC
Sbjct: 3 SGQKRPLTNVQKIALIQKVLD---EEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCS 59
Query: 123 SSTTTMSMGIERVLKEKF 140
SST T+ + IE L+++
Sbjct: 60 SSTATLKIAIESRLRDRI 77
>gi|258516727|ref|YP_003192949.1| nitrogen-fixing NifU domain-containing protein [Desulfotomaculum
acetoxidans DSM 771]
gi|257780432|gb|ACV64326.1| nitrogen-fixing NifU domain protein [Desulfotomaculum acetoxidans
DSM 771]
Length = 73
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 50/72 (69%), Gaps = 2/72 (2%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVE-DGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V+ VL VRPYL DGG++++V + DGVV VKL+GAC P +T T+ GIERVLK+
Sbjct: 3 EKVEEVLGKVRPYLQRDGGDVELVDITPDGVVQVKLKGACSGUPGATITLKQGIERVLKQ 62
Query: 139 KFGDAIKDIRQV 150
+ + +K + QV
Sbjct: 63 EVPE-VKGVVQV 73
>gi|163797123|ref|ZP_02191078.1| nitrogen-fixing NifU-like protein [alpha proteobacterium BAL199]
gi|159177639|gb|EDP62192.1| nitrogen-fixing NifU-like protein [alpha proteobacterium BAL199]
Length = 187
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%), Gaps = 4/62 (6%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
VRP + DGG+I EDGVV++++QGAC CPSST T+ MGIE +L+ I ++R
Sbjct: 124 VRPAVAMDGGDITFQGYEDGVVTLQMQGACSGCPSSTATLKMGIENMLRHY----IPEVR 179
Query: 149 QV 150
+V
Sbjct: 180 EV 181
>gi|403260510|ref|XP_003922711.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 2 [Saimiri boliviensis boliviensis]
Length = 230
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 9/137 (6%)
Query: 26 TKFNERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVD 83
TK NE L + +KP +++ S + PS AGS ++ A +
Sbjct: 98 TKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPSGEAGSE------EDDEVVAMIKE 151
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDA 143
L+ +RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L + +
Sbjct: 152 LLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNML-QFYIPE 210
Query: 144 IKDIRQVYDEEVRETTV 160
++ + QV D+E E V
Sbjct: 211 VEGVEQVMDDESDEKEV 227
>gi|403260508|ref|XP_003922710.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 1 [Saimiri boliviensis boliviensis]
Length = 254
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 9/137 (6%)
Query: 26 TKFNERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVD 83
TK NE L + +KP +++ S + PS AGS ++ A +
Sbjct: 122 TKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPSGEAGSE------EDDEVVAMIKE 175
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDA 143
L+ +RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L + +
Sbjct: 176 LLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNML-QFYIPE 234
Query: 144 IKDIRQVYDEEVRETTV 160
++ + QV D+E E V
Sbjct: 235 VEGVEQVMDDESDEKEV 251
>gi|110637337|ref|YP_677544.1| hypothetical protein CHU_0925 [Cytophaga hutchinsonii ATCC 33406]
gi|110280018|gb|ABG58204.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406]
Length = 86
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 5/71 (7%)
Query: 82 VDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
V+ LE +RPYLI DGGN+ +V + ED +V ++L GACG+CP S T+ G+E E
Sbjct: 14 VEQALESIRPYLITDGGNVRLVEITEDMIVKLELLGACGTCPMSAMTLKAGVE----ESI 69
Query: 141 GDAIKDIRQVY 151
A+ +I+ V+
Sbjct: 70 RKAVPEIKGVF 80
>gi|333977971|ref|YP_004515916.1| nitrogen-fixing NifU domain-containing protein [Desulfotomaculum
kuznetsovii DSM 6115]
gi|333821452|gb|AEG14115.1| nitrogen-fixing NifU domain-containing protein [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 73
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V+ VL +RP L DGG++++V V DGVV V+L+GACG P ST T+ MGIER LK+
Sbjct: 3 EKVEEVLNKIRPALQRDGGDVELVDVGADGVVKVRLKGACGGUPMSTYTLKMGIERSLKQ 62
Query: 139 KFGDAIKDIRQV 150
AI ++++V
Sbjct: 63 ----AIPEVKEV 70
>gi|255536379|ref|YP_003096750.1| Nitrogen-fixing NifU, C-terminal, partial [Flavobacteriaceae
bacterium 3519-10]
gi|255342575|gb|ACU08688.1| Nitrogen-fixing NifU, C-terminal [Flavobacteriaceae bacterium
3519-10]
Length = 77
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 78 TAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
T V LE +RP+L DGG+I++V V + +V VKLQG C CP S +TM +G+E +K
Sbjct: 5 TVSKVMYALEKIRPFLNKDGGDIELVDVRESIVYVKLQGNCNGCPMSFSTMKLGVENTIK 64
Query: 138 E 138
+
Sbjct: 65 Q 65
>gi|42525980|ref|NP_971078.1| NifU family protein [Treponema denticola ATCC 35405]
gi|449107769|ref|ZP_21744416.1| hypothetical protein HMPREF9722_00112 [Treponema denticola ATCC
33520]
gi|449112889|ref|ZP_21749435.1| hypothetical protein HMPREF9735_02484 [Treponema denticola ATCC
33521]
gi|449114895|ref|ZP_21751363.1| hypothetical protein HMPREF9721_01881 [Treponema denticola ATCC
35404]
gi|449117472|ref|ZP_21753889.1| hypothetical protein HMPREF9726_01874 [Treponema denticola H-22]
gi|449118456|ref|ZP_21754865.1| hypothetical protein HMPREF9725_00330 [Treponema denticola H1-T]
gi|449123598|ref|ZP_21759923.1| hypothetical protein HMPREF9727_02683 [Treponema denticola MYR-T]
gi|449127181|ref|ZP_21763455.1| hypothetical protein HMPREF9733_00858 [Treponema denticola SP33]
gi|41816030|gb|AAS10959.1| NifU domain protein [Treponema denticola ATCC 35405]
gi|448944849|gb|EMB25726.1| hypothetical protein HMPREF9733_00858 [Treponema denticola SP33]
gi|448945422|gb|EMB26294.1| hypothetical protein HMPREF9727_02683 [Treponema denticola MYR-T]
gi|448950673|gb|EMB31494.1| hypothetical protein HMPREF9726_01874 [Treponema denticola H-22]
gi|448952833|gb|EMB33630.1| hypothetical protein HMPREF9725_00330 [Treponema denticola H1-T]
gi|448954338|gb|EMB35120.1| hypothetical protein HMPREF9721_01881 [Treponema denticola ATCC
35404]
gi|448955006|gb|EMB35774.1| hypothetical protein HMPREF9735_02484 [Treponema denticola ATCC
33521]
gi|448962720|gb|EMB43407.1| hypothetical protein HMPREF9722_00112 [Treponema denticola ATCC
33520]
Length = 75
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Query: 89 VRPYLIADGGNIDVVSVED-GVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
VRPYL ADGG+I++ SV++ G V VKL+GACGSCP + T+ MG+E LK+ F
Sbjct: 14 VRPYLQADGGDIELDSVDEAGKVYVKLKGACGSCPMAIYTLKMGVEEQLKDMF 66
>gi|451817331|ref|YP_007453532.1| thioredoxin TrxA [Clostridium saccharoperbutylacetonicum N1-4(HMT)]
gi|451783310|gb|AGF54278.1| thioredoxin TrxA [Clostridium saccharoperbutylacetonicum N1-4(HMT)]
Length = 73
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 86 LEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
L+ +RP L DGG++++V V EDG+VSVK+QGACG+CP + T+ M IE LKE+
Sbjct: 9 LDKIRPILQRDGGDVELVDVSEDGIVSVKMQGACGNCPGAMMTIKMIIEEKLKEEV 64
>gi|325105698|ref|YP_004275352.1| nitrogen-fixing NifU domain-containing protein [Pedobacter saltans
DSM 12145]
gi|324974546|gb|ADY53530.1| nitrogen-fixing NifU domain protein [Pedobacter saltans DSM 12145]
Length = 89
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 82 VDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
V+ L+ +RPYL+ADGGN+ V + D VV +KL GACGSCP S T+ GIE+ +K+
Sbjct: 11 VERALDTIRPYLVADGGNVSVEEITNDNVVKLKLLGACGSCPMSFMTLKAGIEQAVKK 68
>gi|330799706|ref|XP_003287883.1| hypothetical protein DICPUDRAFT_20344 [Dictyostelium purpureum]
gi|325082086|gb|EGC35580.1| hypothetical protein DICPUDRAFT_20344 [Dictyostelium purpureum]
Length = 203
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP ++ DGGNI + DG+V V+LQG C SC SS T+ GIER+L +
Sbjct: 123 ELIETRIRPTVLEDGGNIKYMGFADGIVLVQLQGTCSSCSSSQATLKGGIERMLMHWIAE 182
Query: 143 AIKDIRQVYDEEVRETTVE 161
+K + + D+E+ E +E
Sbjct: 183 -VKGVVAISDDELNELNLE 200
>gi|304317418|ref|YP_003852563.1| nitrogen-fixing NifU domain-containing protein
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|433655601|ref|YP_007299309.1| thioredoxin-like protein [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|302778920|gb|ADL69479.1| nitrogen-fixing NifU domain protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|433293790|gb|AGB19612.1| thioredoxin-like protein [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 73
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V+ VL +RP L ADGG+++++ V +DGVV VKL GACG CP + T+ GIER +KE
Sbjct: 3 ERVEEVLNLLRPSLQADGGDVELIDVTDDGVVQVKLTGACGGCPFAVMTLKEGIERAIKE 62
Query: 139 KF 140
+
Sbjct: 63 EL 64
>gi|150025719|ref|YP_001296545.1| NifU-like protein [Flavobacterium psychrophilum JIP02/86]
gi|149772260|emb|CAL43736.1| NifU-like protein [Flavobacterium psychrophilum JIP02/86]
Length = 79
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Query: 81 NVDLVLEDVRPYLIADGGNIDVVSVEDGV-VSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
NV+ LE++RP+L +DGG+I++VS+ED V V+LQGAC SC S TM G+E +K K
Sbjct: 9 NVEKALEEIRPFLNSDGGDIELVSIEDSKHVKVRLQGACNSCSVSQMTMRAGVETTIK-K 67
Query: 140 FGDAIKDI 147
+ I+ +
Sbjct: 68 YAPQIETV 75
>gi|397690836|ref|YP_006528090.1| nitrogen-fixing NifU domain protein [Melioribacter roseus P3M]
gi|395812328|gb|AFN75077.1| nitrogen-fixing NifU domain protein [Melioribacter roseus P3M]
Length = 78
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVE-DGVVSVKLQGACGSCPSSTTTMSMGIER 134
D + V+ LE++RPYL ADGG+I++V V +G+V VKL GAC CP S T+ G+ER
Sbjct: 3 DTLKEKVEQALENIRPYLRADGGDIELVQVTPEGIVEVKLTGACIECPMSQMTLRAGVER 62
Query: 135 VL 136
L
Sbjct: 63 AL 64
>gi|163781905|ref|ZP_02176905.1| nifU-like domain protein [Hydrogenivirga sp. 128-5-R1-1]
gi|159883125|gb|EDP76629.1| nifU-like domain protein [Hydrogenivirga sp. 128-5-R1-1]
Length = 87
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Query: 78 TAKNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
T + V+ VL+++RP L DGG++++V + EDG V V+L GAC C S T+ GIER L
Sbjct: 5 TREEVEKVLDEIRPALRFDGGDVELVDIQEDGTVLVRLVGACSGCGMSVLTLKAGIERAL 64
Query: 137 KEKFGDAIKDIRQV 150
K+KF + IK+++ V
Sbjct: 65 KQKFPE-IKEVKDV 77
>gi|157167461|ref|XP_001654807.1| hypothetical protein AaeL_AAEL002148 [Aedes aegypti]
gi|108882432|gb|EAT46657.1| AAEL002148-PA [Aedes aegypti]
Length = 263
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I ++ EDGVV +K+QG+C SCPSS T+ G++ +L+ +
Sbjct: 172 ELLDSKIRPTVQEDGGDIIFMAFEDGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPE 231
Query: 143 AIKDIRQVYD--EEVRETTVE 161
+ + QV+D +EV ET E
Sbjct: 232 VVA-VEQVFDKVDEVTETEFE 251
>gi|328949227|ref|YP_004366564.1| nitrogen-fixing NifU domain-containing protein [Treponema
succinifaciens DSM 2489]
gi|328449551|gb|AEB15267.1| nitrogen-fixing NifU domain-containing protein [Treponema
succinifaciens DSM 2489]
Length = 78
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 86 LEDVRPYLIADGGNIDVVSVED-GVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
LE RP L ADGG+++ ++++D V +KL GACGSCP +T T+ MGIER LKE
Sbjct: 14 LEAFRPQLNADGGDMEFINIDDENKVHLKLTGACGSCPMATMTLKMGIERYLKE 67
>gi|421881379|ref|ZP_16312715.1| Iron-sulfur cluster assembly scaffold protein NifU [Helicobacter
bizzozeronii CCUG 35545]
gi|375316522|emb|CCF80711.1| Iron-sulfur cluster assembly scaffold protein NifU [Helicobacter
bizzozeronii CCUG 35545]
Length = 94
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
K V++ LE +RP L+ DGG++ ++ +++ V V L+GAC CPSS T+ GIER L+E+
Sbjct: 10 KPVEIALEKIRPMLLRDGGDVVLLGIKEAKVYVSLEGACKGCPSSANTLKFGIERCLQEE 69
Query: 140 F 140
Sbjct: 70 I 70
>gi|71662836|ref|XP_818418.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70883670|gb|EAN96567.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 280
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 64/131 (48%), Gaps = 20/131 (15%)
Query: 46 KSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVD---------LVLEDVRPYLIAD 96
K E A R N + G L S H D K+ D L+ +RP L AD
Sbjct: 142 KESIEEFAERKMNVLSEEGED--LLSGHNEDTEPKDDDDEVILAVKELLATRIRPMLQAD 199
Query: 97 GGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIRQVYDEEVR 156
GGN+ + ++DG V V L+GAC SCPS++ T+ GIER+L + + EV+
Sbjct: 200 GGNVRYLDMDDGTVFVLLEGACKSCPSASVTLKNGIERMLMHWIPEVV---------EVQ 250
Query: 157 ETTVEVSALLL 167
E T E++ +L
Sbjct: 251 ECTEEMADDIL 261
>gi|386749007|ref|YP_006222214.1| NifU [Helicobacter cetorum MIT 00-7128]
gi|384555250|gb|AFI03584.1| conserved hypothetical nifU-like protein [Helicobacter cetorum MIT
00-7128]
Length = 87
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 41/58 (70%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
K V + +E +RPYLI DGGNI+++ ++D V V L+GAC SCPSS T+ +ER L+
Sbjct: 9 KPVRVSVEKIRPYLIKDGGNIEIIGIKDMRVYVILEGACKSCPSSKVTLKSVVERQLR 66
>gi|333993050|ref|YP_004525663.1| hypothetical protein TREAZ_2274 [Treponema azotonutricium ZAS-9]
gi|333735255|gb|AEF81204.1| conserved domain protein [Treponema azotonutricium ZAS-9]
Length = 74
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 86 LEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
L++VRP L ADGG+++ V V E+G+VS+KL GACG CP + T+ MGIE LK++
Sbjct: 10 LDNVRPSLQADGGDVEFVGVDEEGIVSLKLTGACGGCPMAQMTLKMGIESYLKKEI 65
>gi|435853944|ref|YP_007315263.1| thioredoxin-like protein [Halobacteroides halobius DSM 5150]
gi|433670355|gb|AGB41170.1| thioredoxin-like protein [Halobacteroides halobius DSM 5150]
Length = 73
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 51/72 (70%), Gaps = 2/72 (2%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVED-GVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V+ VL ++RP L ADGG++++V V D G+V V+LQGAC CP S T+ GIE+ LK+
Sbjct: 3 EKVEKVLNEIRPSLQADGGDVELVEVTDEGIVKVELQGACAGCPMSQMTLKNGIEKRLKK 62
Query: 139 KFGDAIKDIRQV 150
+ + +K+++ V
Sbjct: 63 EIPE-VKEVQSV 73
>gi|332226730|ref|XP_003262545.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 1 [Nomascus leucogenys]
Length = 254
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 9/134 (6%)
Query: 26 TKFNERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVD 83
TK NE L + +KP +++ S + PS AGS ++ A +
Sbjct: 122 TKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPSGEAGSE------EDDEVVAMIKE 175
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDA 143
L+ +RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L + +
Sbjct: 176 LLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNML-QFYIPE 234
Query: 144 IKDIRQVYDEEVRE 157
++ + QV D+E E
Sbjct: 235 VEGVEQVMDDESDE 248
>gi|289548959|ref|YP_003473947.1| nitrogen-fixing NifU domain-containing protein [Thermocrinis albus
DSM 14484]
gi|289182576|gb|ADC89820.1| nitrogen-fixing NifU domain protein [Thermocrinis albus DSM 14484]
Length = 85
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 78 TAKNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
T + ++ VL+++RP L DGG++++V V EDG V V++ GAC C S T+ GIER L
Sbjct: 3 TREEIEAVLDEIRPALRFDGGDVELVDVLEDGTVLVRMIGACAGCGMSVLTLKAGIERAL 62
Query: 137 KEKFGDAIKDIRQV 150
K +F D IK+++ V
Sbjct: 63 KSRFPD-IKEVKDV 75
>gi|422340499|ref|ZP_16421440.1| NifU domain-containing protein [Treponema denticola F0402]
gi|449103554|ref|ZP_21740299.1| hypothetical protein HMPREF9730_01196 [Treponema denticola AL-2]
gi|449106415|ref|ZP_21743081.1| hypothetical protein HMPREF9729_01346 [Treponema denticola ASLM]
gi|449125267|ref|ZP_21761569.1| hypothetical protein HMPREF9723_01613 [Treponema denticola OTK]
gi|449130284|ref|ZP_21766505.1| hypothetical protein HMPREF9724_01170 [Treponema denticola SP37]
gi|451968124|ref|ZP_21921353.1| hypothetical protein HMPREF9728_00524 [Treponema denticola US-Trep]
gi|325475673|gb|EGC78849.1| NifU domain-containing protein [Treponema denticola F0402]
gi|448939236|gb|EMB20153.1| hypothetical protein HMPREF9723_01613 [Treponema denticola OTK]
gi|448943123|gb|EMB24016.1| hypothetical protein HMPREF9724_01170 [Treponema denticola SP37]
gi|448964708|gb|EMB45376.1| hypothetical protein HMPREF9730_01196 [Treponema denticola AL-2]
gi|448964928|gb|EMB45594.1| hypothetical protein HMPREF9729_01346 [Treponema denticola ASLM]
gi|451703081|gb|EMD57463.1| hypothetical protein HMPREF9728_00524 [Treponema denticola US-Trep]
Length = 75
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Query: 89 VRPYLIADGGNIDVVSVED-GVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
+RPYL ADGG+I++ SV++ G V VKL+GACGSCP + T+ MG+E LK+ F
Sbjct: 14 IRPYLQADGGDIELDSVDEAGKVYVKLKGACGSCPMAIYTLKMGVEEQLKDMF 66
>gi|333896678|ref|YP_004470552.1| nitrogen-fixing NifU domain-containing protein
[Thermoanaerobacterium xylanolyticum LX-11]
gi|390935553|ref|YP_006393058.1| nitrogen-fixing NifU domain-containing protein
[Thermoanaerobacterium saccharolyticum JW/SL-YS485]
gi|333111943|gb|AEF16880.1| nitrogen-fixing NifU domain-containing protein
[Thermoanaerobacterium xylanolyticum LX-11]
gi|389571054|gb|AFK87459.1| nitrogen-fixing NifU domain-containing protein
[Thermoanaerobacterium saccharolyticum JW/SL-YS485]
Length = 73
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V+ VL+ +RP L ADGG++++V V +DGVV V+L GACG CP + T+ GIER +KE
Sbjct: 3 ERVEEVLKLLRPSLQADGGDVELVDVTDDGVVQVRLTGACGGCPFAVMTLKEGIERAIKE 62
Query: 139 KF 140
+
Sbjct: 63 EI 64
>gi|55596270|ref|XP_525775.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 8 [Pan troglodytes]
gi|397521803|ref|XP_003830976.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
[Pan paniscus]
gi|410209724|gb|JAA02081.1| NFU1 iron-sulfur cluster scaffold homolog [Pan troglodytes]
gi|410253660|gb|JAA14797.1| NFU1 iron-sulfur cluster scaffold homolog [Pan troglodytes]
gi|410291790|gb|JAA24495.1| NFU1 iron-sulfur cluster scaffold homolog [Pan troglodytes]
gi|410333769|gb|JAA35831.1| NFU1 iron-sulfur cluster scaffold homolog [Pan troglodytes]
Length = 254
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 9/134 (6%)
Query: 26 TKFNERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVD 83
TK NE L + +KP +++ S + PS AGS ++ A +
Sbjct: 122 TKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPSGEAGSE------EDDEVVAMIKE 175
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDA 143
L+ +RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L + +
Sbjct: 176 LLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNML-QFYIPE 234
Query: 144 IKDIRQVYDEEVRE 157
++ + QV D+E E
Sbjct: 235 VEGVEQVMDDESDE 248
>gi|328953813|ref|YP_004371147.1| nitrogen-fixing NifU domain-containing protein [Desulfobacca
acetoxidans DSM 11109]
gi|328454137|gb|AEB09966.1| nitrogen-fixing NifU domain-containing protein [Desulfobacca
acetoxidans DSM 11109]
Length = 72
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%)
Query: 86 LEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
L +RP L DGG++++V VE GVV VKL GAC CP S T+ GIER+LK++
Sbjct: 9 LAKIRPMLQRDGGDVELVEVEHGVVKVKLTGACKGCPMSQMTLKNGIERLLKQEV 63
>gi|327348799|gb|EGE77656.1| HIRA-interacting protein 5 [Ajellomyces dermatitidis ATCC 18188]
Length = 318
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I+ EDG+VS+KL+GAC +C SST T+ GIE +L + +
Sbjct: 214 ELLETRIRPAIQEDGGDIEFRGFEDGIVSLKLRGACRTCDSSTVTLKNGIESMLMH-YIE 272
Query: 143 AIKDIRQVYDEE 154
+K++ V D+E
Sbjct: 273 EVKEVNHVLDQE 284
>gi|34500319|gb|AAQ73784.1| NifU-like protein HIRIP5 [Homo sapiens]
gi|194374137|dbj|BAG62381.1| unnamed protein product [Homo sapiens]
Length = 254
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 9/134 (6%)
Query: 26 TKFNERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVD 83
TK NE L + +KP +++ S + PS AGS ++ A +
Sbjct: 122 TKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPSGEAGSE------EDDEVVAMIKE 175
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDA 143
L+ +RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L + +
Sbjct: 176 LLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNML-QFYIPE 234
Query: 144 IKDIRQVYDEEVRE 157
++ + QV D+E E
Sbjct: 235 VEGVEQVMDDESDE 248
>gi|296223650|ref|XP_002757718.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
[Callithrix jacchus]
Length = 235
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 9/134 (6%)
Query: 26 TKFNERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVD 83
TK NE L + +KP +++ S + PS AGS ++ A +
Sbjct: 103 TKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPSGEAGSE------EDDEVVAMIKE 156
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDA 143
L+ +RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L+ +
Sbjct: 157 LLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQ-FYIPE 215
Query: 144 IKDIRQVYDEEVRE 157
++ + QV D+E E
Sbjct: 216 VEGVEQVMDDESDE 229
>gi|50593025|ref|NP_056515.2| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform 1
[Homo sapiens]
gi|32967071|gb|AAP92373.1| cytosolic iron-sulfur cluster scaffold protein Nfu [Homo sapiens]
gi|119620256|gb|EAW99850.1| HIRA interacting protein 5, isoform CRA_b [Homo sapiens]
Length = 230
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 9/134 (6%)
Query: 26 TKFNERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVD 83
TK NE L + +KP +++ S + PS AGS ++ A +
Sbjct: 98 TKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPSGEAGSE------EDDEVVAMIKE 151
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDA 143
L+ +RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L + +
Sbjct: 152 LLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNML-QFYIPE 210
Query: 144 IKDIRQVYDEEVRE 157
++ + QV D+E E
Sbjct: 211 VEGVEQVMDDESDE 224
>gi|226292348|gb|EEH47768.1| HIRA interacting protein [Paracoccidioides brasiliensis Pb18]
Length = 317
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I+ EDG+V++KL+GAC +C SST T+ GIE +L + +
Sbjct: 214 ELLETRIRPAIQEDGGDIEFRGFEDGIVNLKLRGACRTCDSSTVTLKNGIESMLMH-YIE 272
Query: 143 AIKDIRQVYDEE 154
+K + QV D+E
Sbjct: 273 EVKGVNQVLDQE 284
>gi|332813521|ref|XP_003309120.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
[Pan troglodytes]
gi|5738608|emb|CAB53015.1| HIRA-interacting protein HIRIP5 [Homo sapiens]
gi|62822279|gb|AAY14828.1| unknown [Homo sapiens]
gi|189054196|dbj|BAG36716.1| unnamed protein product [Homo sapiens]
Length = 196
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 9/134 (6%)
Query: 26 TKFNERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVD 83
TK NE L + +KP +++ S + PS AGS ++ A +
Sbjct: 64 TKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPSGEAGSE------EDDEVVAMIKE 117
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDA 143
L+ +RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L+ +
Sbjct: 118 LLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQ-FYIPE 176
Query: 144 IKDIRQVYDEEVRE 157
++ + QV D+E E
Sbjct: 177 VEGVEQVMDDESDE 190
>gi|114577877|ref|XP_001137587.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 7 [Pan troglodytes]
Length = 230
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 9/134 (6%)
Query: 26 TKFNERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVD 83
TK NE L + +KP +++ S + PS AGS ++ A +
Sbjct: 98 TKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPSGEAGSE------EDDEVVAMIKE 151
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDA 143
L+ +RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L + +
Sbjct: 152 LLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNML-QFYIPE 210
Query: 144 IKDIRQVYDEEVRE 157
++ + QV D+E E
Sbjct: 211 VEGVEQVMDDESDE 224
>gi|332226734|ref|XP_003262547.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 3 [Nomascus leucogenys]
Length = 230
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 9/134 (6%)
Query: 26 TKFNERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVD 83
TK NE L + +KP +++ S + PS AGS ++ A +
Sbjct: 98 TKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPSGEAGSE------EDDEVVAMIKE 151
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDA 143
L+ +RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L + +
Sbjct: 152 LLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNML-QFYIPE 210
Query: 144 IKDIRQVYDEEVRE 157
++ + QV D+E E
Sbjct: 211 VEGVEQVMDDESDE 224
>gi|159045379|ref|YP_001534173.1| hypothetical protein Dshi_2839 [Dinoroseobacter shibae DFL 12]
gi|157913139|gb|ABV94572.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12]
Length = 187
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 64/115 (55%), Gaps = 11/115 (9%)
Query: 29 NERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQF---DLTAKNVD 83
+E +++ IKP +V++ S + A+ SAPAG ++AH ++ + +
Sbjct: 66 DEGVEWDHIKPAVLGAVMEHYQSGD-AVMTGEASAPAG-----HAAHDGPDSEIVGQIKE 119
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
L+ VRP + DGG+I + G+V + +QGAC CPSST T+ MGIE +L+
Sbjct: 120 LLDTRVRPAVAQDGGDITFHGFDRGIVYLHMQGACAGCPSSTLTLKMGIENLLRH 174
>gi|50593021|ref|NP_001002755.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform 2
[Homo sapiens]
gi|205371805|sp|Q9UMS0.2|NFU1_HUMAN RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; AltName: Full=HIRA-interacting protein 5;
Flags: Precursor
gi|32967069|gb|AAP92372.1| iron-sulfur cluster scaffold protein Nfu [Homo sapiens]
gi|109731123|gb|AAI13693.1| NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Homo
sapiens]
gi|109731125|gb|AAI13695.1| NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Homo
sapiens]
gi|119620255|gb|EAW99849.1| HIRA interacting protein 5, isoform CRA_a [Homo sapiens]
gi|261860742|dbj|BAI46893.1| NFU1 iron-sulfur cluster scaffold homolog [synthetic construct]
gi|313884030|gb|ADR83501.1| NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)
[synthetic construct]
Length = 254
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 9/134 (6%)
Query: 26 TKFNERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVD 83
TK NE L + +KP +++ S + PS AGS ++ A +
Sbjct: 122 TKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPSGEAGSE------EDDEVVAMIKE 175
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDA 143
L+ +RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L + +
Sbjct: 176 LLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNML-QFYIPE 234
Query: 144 IKDIRQVYDEEVRE 157
++ + QV D+E E
Sbjct: 235 VEGVEQVMDDESDE 248
>gi|239610759|gb|EEQ87746.1| HIRA-interacting protein 5 [Ajellomyces dermatitidis ER-3]
Length = 318
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I+ EDG+VS+KL+GAC +C SST T+ GIE +L + +
Sbjct: 214 ELLETRIRPAIQEDGGDIEFRGFEDGIVSLKLRGACRTCDSSTVTLKNGIESMLMH-YIE 272
Query: 143 AIKDIRQVYDEE 154
+K++ V D+E
Sbjct: 273 EVKEVNHVLDQE 284
>gi|261194942|ref|XP_002623875.1| HIRA-interacting protein 5 [Ajellomyces dermatitidis SLH14081]
gi|239587747|gb|EEQ70390.1| HIRA-interacting protein 5 [Ajellomyces dermatitidis SLH14081]
Length = 318
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I+ EDG+VS+KL+GAC +C SST T+ GIE +L + +
Sbjct: 214 ELLETRIRPAIQEDGGDIEFRGFEDGIVSLKLRGACRTCDSSTVTLKNGIESMLMH-YIE 272
Query: 143 AIKDIRQVYDEE 154
+K++ V D+E
Sbjct: 273 EVKEVNHVLDQE 284
>gi|376316543|emb|CCF99932.1| protein containing nitrogen-fixing NifU domain [uncultured
Flavobacteriia bacterium]
Length = 196
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 47/71 (66%), Gaps = 5/71 (7%)
Query: 85 VLED-VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDA 143
+L+D VRP + ADGG ID S EDG +++ L+GAC CPSST T+ GIE + K+
Sbjct: 129 ILDDHVRPAVAADGGAIDFKSFEDGKLTLTLKGACSGCPSSTLTLKSGIENIFKQ----M 184
Query: 144 IKDIRQVYDEE 154
+ +I+++ EE
Sbjct: 185 MPEIKEIVAEE 195
>gi|408907140|emb|CCM11618.1| Iron-sulfur cluster assembly scaffold protein NifU [Helicobacter
heilmannii ASB1.4]
Length = 89
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 40/60 (66%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
K V+L LE +RP L+ DGGN+ ++ ++D V V L GAC C SS T+ GIER L+E+
Sbjct: 10 KPVELALEKIRPMLLRDGGNVVLLGIKDAKVYVNLVGACKGCASSANTLKFGIERCLQEE 69
>gi|336452999|ref|YP_004607465.1| nitrogen-fixing NifU-like [Helicobacter bizzozeronii CIII-1]
gi|335333026|emb|CCB79753.1| nitrogen-fixing NifU-like [Helicobacter bizzozeronii CIII-1]
Length = 94
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
K V++ LE +RP L+ DGG++ ++ +++ V V L+GAC CPSS T+ GIER L+E+
Sbjct: 10 KPVEIALEKIRPMLLRDGGDVVLLGIKEAKVYVSLEGACRGCPSSANTLKFGIERCLQEE 69
Query: 140 F 140
Sbjct: 70 I 70
>gi|114053059|ref|NP_001040031.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial [Bos
taurus]
gi|86823819|gb|AAI05370.1| NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Bos
taurus]
gi|296482427|tpg|DAA24542.1| TPA: HIRA interacting protein 5 [Bos taurus]
Length = 253
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 9/134 (6%)
Query: 26 TKFNERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVD 83
TK NE L + +KP +++ S + PS AGS ++ A +
Sbjct: 121 TKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPSGEAGSE------DDDEVVAMIKE 174
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDA 143
L+ +RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L + +
Sbjct: 175 LLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNML-QFYIPE 233
Query: 144 IKDIRQVYDEEVRE 157
++ + QV D+E E
Sbjct: 234 VEGVEQVMDDESDE 247
>gi|225680672|gb|EEH18956.1| HIRA-interacting protein [Paracoccidioides brasiliensis Pb03]
Length = 317
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I+ EDG+V++KL+GAC +C SST T+ GIE +L + +
Sbjct: 214 ELLETRIRPAIQEDGGDIEFRGFEDGIVNLKLRGACRTCDSSTVTLKNGIESMLMH-YIE 272
Query: 143 AIKDIRQVYDEE 154
+K + QV D+E
Sbjct: 273 EVKGVNQVLDQE 284
>gi|441642027|ref|XP_004090414.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
[Nomascus leucogenys]
Length = 196
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 9/134 (6%)
Query: 26 TKFNERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVD 83
TK NE L + +KP +++ S + PS AGS ++ A +
Sbjct: 64 TKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPSGEAGSE------EDDEVVAMIKE 117
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDA 143
L+ +RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L+ +
Sbjct: 118 LLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQ-FYIPE 176
Query: 144 IKDIRQVYDEEVRE 157
++ + QV D+E E
Sbjct: 177 VEGVEQVMDDESDE 190
>gi|372210382|ref|ZP_09498184.1| hypothetical protein FbacS_09702 [Flavobacteriaceae bacterium S85]
Length = 78
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 42/58 (72%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
K V++ LE++RP+L+ DGG+I +V++E+ VV VKL+GAC C + T+ G+E +K
Sbjct: 8 KKVEIALEEIRPFLVTDGGDISLVAIEENVVKVKLEGACVGCNVNQMTLKNGVEATIK 65
>gi|288818297|ref|YP_003432645.1| NifU-like protein [Hydrogenobacter thermophilus TK-6]
gi|384129057|ref|YP_005511670.1| nitrogen-fixing NifU domain-containing protein [Hydrogenobacter
thermophilus TK-6]
gi|288787697|dbj|BAI69444.1| NifU-like protein [Hydrogenobacter thermophilus TK-6]
gi|308751894|gb|ADO45377.1| nitrogen-fixing NifU domain protein [Hydrogenobacter thermophilus
TK-6]
Length = 87
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 78 TAKNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
T + ++ VL+++RP L DGG++++V V EDG V V++ GAC C S T+ GIER L
Sbjct: 5 TREEIEAVLDEIRPALRFDGGDVELVDVLEDGTVLVRMMGACSGCGMSVLTLKAGIERAL 64
Query: 137 KEKFGDAIKDIRQV 150
K KF + IK+++ +
Sbjct: 65 KNKFPE-IKEVKDI 77
>gi|390442777|ref|ZP_10230577.1| nitrogen-fixing NifU domain-containing protein [Nitritalea
halalkaliphila LW7]
gi|389667420|gb|EIM78840.1| nitrogen-fixing NifU domain-containing protein [Nitritalea
halalkaliphila LW7]
Length = 73
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 82 VDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
+++ L+ +RPYL ADGGN+ +V + ED V+ ++L GACG+CP ST T+ G+E + +F
Sbjct: 9 IEVALDSIRPYLEADGGNVKIVELTEDMVLRLELLGACGTCPMSTMTLKAGVEEAVNGRF 68
>gi|302340763|ref|YP_003805969.1| nitrogen-fixing NifU domain-containing protein [Spirochaeta
smaragdinae DSM 11293]
gi|301637948|gb|ADK83375.1| nitrogen-fixing NifU domain protein [Spirochaeta smaragdinae DSM
11293]
Length = 77
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
Query: 74 QFDLTAKNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGI 132
+ +L K V ++D+RP L ADGG+I++V+V E+G VSV+L GAC CP + T+ G+
Sbjct: 2 ELELEGK-VKKAIQDIRPSLQADGGDIELVTVGENGKVSVRLTGACNGCPMAQITLKQGV 60
Query: 133 ERVLKE 138
ER LKE
Sbjct: 61 ERYLKE 66
>gi|434407222|ref|YP_007150107.1| Modular FeS cluster scaffolding protein NifU [Cylindrospermum
stagnale PCC 7417]
gi|428261477|gb|AFZ27427.1| Modular FeS cluster scaffolding protein NifU [Cylindrospermum
stagnale PCC 7417]
Length = 303
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Query: 50 HETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGV 109
+ ++ + + +G L + + L K +D E+VRP LIADGG++++ VE
Sbjct: 203 NNNGVKTTTDISTSGKQKPLTNVQRIALIQKVLD---EEVRPVLIADGGDVELYDVEGDR 259
Query: 110 VSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
V V LQGACGSC SST T+ + IE L+++
Sbjct: 260 VKVILQGACGSCSSSTATLKIAIEARLQDR 289
>gi|88802135|ref|ZP_01117663.1| NifU protein [Polaribacter irgensii 23-P]
gi|88782793|gb|EAR13970.1| NifU protein [Polaribacter irgensii 23-P]
Length = 301
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVED--GVVSVKLQGACGSCPSSTTTMSMGIER 134
++A+ VD++ E ++P + +DGGNI S ++ VV V LQGAC CPSST T+ GIE
Sbjct: 224 ISAQIVDILDEYIKPAVASDGGNIAFRSYDEQTKVVRVILQGACSGCPSSTATLKNGIEN 283
Query: 135 VLKEKFGDAIKDI 147
+LKE D I ++
Sbjct: 284 LLKEMLPDQINEV 296
>gi|78189610|ref|YP_379948.1| NifU protein [Chlorobium chlorochromatii CaD3]
gi|78171809|gb|ABB28905.1| NifU protein, putative [Chlorobium chlorochromatii CaD3]
Length = 84
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 86 LEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
LE VRPYL ADGG+ +V + +D VV VKL GACGSCP ST T+ G+E+ +K+ + +
Sbjct: 20 LETVRPYLQADGGDCQLVGISKDMVVDVKLLGACGSCPMSTLTLRAGVEQAIKKAIPEIV 79
Query: 145 K 145
+
Sbjct: 80 R 80
>gi|312132200|ref|YP_003999540.1| nitrogen-fixing protein NifU domain-containing protein
[Leadbetterella byssophila DSM 17132]
gi|311908746|gb|ADQ19187.1| nitrogen-fixing NifU domain protein [Leadbetterella byssophila DSM
17132]
Length = 83
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIER 134
DL K V+ L+++RPYLIADGGN+ V+ + ED VV ++ G+CGSCP S+ T G+E
Sbjct: 3 DLNVK-VEQALDNIRPYLIADGGNVKVLEITEDKVVKLEFTGSCGSCPMSSMTFKAGLEE 61
Query: 135 VL 136
+
Sbjct: 62 AI 63
>gi|330813331|ref|YP_004357570.1| hypothetical protein SAR11G3_00356 [Candidatus Pelagibacter sp.
IMCC9063]
gi|327486426|gb|AEA80831.1| hypothetical protein SAR11G3_00356 [Candidatus Pelagibacter sp.
IMCC9063]
Length = 179
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 76 DLTAKNVDLVLED-VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
D ++ ++ VL D +RP + DGG+I + S +DG+V V L+G+C CPSST T+ G+ER
Sbjct: 102 DEISQRIEEVLNDKIRPAVAMDGGDIQLKSYKDGIVEVMLKGSCAGCPSSTVTLKQGVER 161
Query: 135 VLK 137
++K
Sbjct: 162 MIK 164
>gi|414078579|ref|YP_006997897.1| Fe-S cluster assembly protein NifU [Anabaena sp. 90]
gi|413971995|gb|AFW96084.1| Fe-S cluster assembly protein NifU [Anabaena sp. 90]
Length = 299
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 54/94 (57%), Gaps = 9/94 (9%)
Query: 51 ETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVV 110
+T I +S P P L + + L K +D E+VRP LIADGG++++ VE +
Sbjct: 210 KTEIPSSEPQKP------LTTVQKIALIQKVLD---EEVRPVLIADGGDVELYDVEGDKI 260
Query: 111 SVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
V L+GACGSC SST T+ + IE L+++ I
Sbjct: 261 KVILKGACGSCSSSTATLKIAIEARLRDRISKEI 294
>gi|298490557|ref|YP_003720734.1| Fe-S cluster assembly protein NifU ['Nostoc azollae' 0708]
gi|298232475|gb|ADI63611.1| Fe-S cluster assembly protein NifU ['Nostoc azollae' 0708]
Length = 306
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 40/58 (68%)
Query: 87 EDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
E+VRP LIADGG++++ VE V V LQGACGSC SST T+ + IE L+++ I
Sbjct: 242 EEVRPVLIADGGDVELYDVEGDKVKVVLQGACGSCSSSTATLKIAIESRLRDRISKEI 299
>gi|357449363|ref|XP_003594958.1| NifU-like protein [Medicago truncatula]
gi|355484006|gb|AES65209.1| NifU-like protein [Medicago truncatula]
Length = 135
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 94 IADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIRQVYDE 153
+ADGGN+ + ++ VV +KLQGACGSCPSST T+ MGIE L++K + I ++ Q+ D
Sbjct: 1 MADGGNVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIETRLRDKIPE-ILEVEQILDT 59
Query: 154 E 154
E
Sbjct: 60 E 60
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 75 FDLTAKNVDLVLEDVRPYLIA-DGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+LT NV+ VL ++RPYLI GG +++V + D +V V+L G P++ M +
Sbjct: 63 LELTEDNVESVLSEIRPYLIGTGGGTLELVEINDYIVKVRLSG-----PAAGV---MTVR 114
Query: 134 RVLKEKFGDAIKDIRQV 150
L +K D I I V
Sbjct: 115 VALTQKLRDKIPSIAAV 131
>gi|257059658|ref|YP_003137546.1| Fe-S cluster assembly protein NifU [Cyanothece sp. PCC 8802]
gi|256589824|gb|ACV00711.1| Fe-S cluster assembly protein NifU [Cyanothece sp. PCC 8802]
Length = 294
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 39/53 (73%)
Query: 87 EDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
E+++P L DGG++++ VE +V V LQGACGSC SST T+ MGIE L+E+
Sbjct: 232 EEIKPALAKDGGDVELFDVEGDLVKVILQGACGSCASSTQTLKMGIEARLRER 284
>gi|346972175|gb|EGY15627.1| HIRA-interacting protein [Verticillium dahliae VdLs.17]
Length = 292
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
Query: 47 SGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVE 106
SG+ ++ +APA Y+ ++ +L+ +RP + DGG+I+ E
Sbjct: 161 SGAPLVVVKDGAEAAPAEEDSLAYNEDDSEVVGMIKELLETRIRPAIQEDGGDIEFRGFE 220
Query: 107 DGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIRQVYDEE 154
DGVV +KL+GAC +C SST T+ GIE +L + + +K + QV D E
Sbjct: 221 DGVVLLKLRGACRTCDSSTVTLKNGIEGMLMH-YIEEVKSVNQVMDPE 267
>gi|218246615|ref|YP_002371986.1| Fe-S cluster assembly protein NifU [Cyanothece sp. PCC 8801]
gi|218167093|gb|ACK65830.1| Fe-S cluster assembly protein NifU [Cyanothece sp. PCC 8801]
Length = 294
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 39/53 (73%)
Query: 87 EDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
E+++P L DGG++++ VE +V V LQGACGSC SST T+ MGIE L+E+
Sbjct: 232 EEIKPALAKDGGDVELFDVEGDLVKVILQGACGSCASSTQTLKMGIEARLRER 284
>gi|313675047|ref|YP_004053043.1| nitrogen-fixing nifu domain protein [Marivirga tractuosa DSM 4126]
gi|312941745|gb|ADR20935.1| nitrogen-fixing NifU domain protein [Marivirga tractuosa DSM 4126]
Length = 91
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 42/57 (73%)
Query: 82 VDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
++ L+ +RPYL ADGGN+ ++ + +GV+ ++L GACG+CP ST T+ G+E +K+
Sbjct: 7 IEKALDSIRPYLEADGGNVRILDLNEGVLRLELLGACGNCPMSTMTLKAGVEEAVKK 63
>gi|255940800|ref|XP_002561169.1| Pc16g08500 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585792|emb|CAP93520.1| Pc16g08500 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 320
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I++ E+G+V +KL+GAC +C SST T+ GIE +L + +
Sbjct: 217 ELLETRIRPAIQEDGGDIELKGFENGIVMLKLRGACRTCDSSTVTLKNGIESMLMH-YIE 275
Query: 143 AIKDIRQVYDEEVRETTVEVSALLLCLISDKRYYYTTAVPL 183
+K + QV DEE + E S L K T PL
Sbjct: 276 EVKGVEQVMDEEEIISMHEFSKFEEKLRQQKGAAATAGAPL 316
>gi|428297141|ref|YP_007135447.1| Fe-S cluster assembly protein NifU [Calothrix sp. PCC 6303]
gi|428233685|gb|AFY99474.1| Fe-S cluster assembly protein NifU [Calothrix sp. PCC 6303]
Length = 302
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
Query: 69 LYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTM 128
L + + L K +D E+VRP LIADGG++++ V+ +V V LQGACGSC SST T+
Sbjct: 219 LTNVQKIALIQKVLD---EEVRPVLIADGGDVELYDVDGDIVQVLLQGACGSCSSSTATL 275
Query: 129 SMGIERVLKEKF 140
+ IE L+++
Sbjct: 276 KIAIEARLRDRI 287
>gi|427708715|ref|YP_007051092.1| Modular FeS cluster scaffolding protein NifU [Nostoc sp. PCC 7107]
gi|427361220|gb|AFY43942.1| Modular FeS cluster scaffolding protein NifU [Nostoc sp. PCC 7107]
Length = 306
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query: 69 LYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTM 128
L + + L K +D E+VRP LIADGG++++ +E V V LQGACGSC SST T+
Sbjct: 225 LTNVQKIALIQKVLD---EEVRPVLIADGGDVELYDIEGNTVKVILQGACGSCSSSTATL 281
Query: 129 SMGIERVLKEKF 140
+ IE L+++
Sbjct: 282 KIAIESRLRDRI 293
>gi|85859635|ref|YP_461837.1| nifU-like domain-containing protein [Syntrophus aciditrophicus SB]
gi|85722726|gb|ABC77669.1| nifU-like domain protein [Syntrophus aciditrophicus SB]
Length = 73
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 86 LEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
++ VRP L ADGG++++V V EDGVV V+L GAC C S T+ MGIER LKE+
Sbjct: 9 IDQVRPGLQADGGDVELVDVTEDGVVKVRLVGACRGCAMSQMTLKMGIERFLKERI 64
>gi|262277769|ref|ZP_06055562.1| NifU domain protein [alpha proteobacterium HIMB114]
gi|262224872|gb|EEY75331.1| NifU domain protein [alpha proteobacterium HIMB114]
Length = 179
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 76 DLTAKNVDLVLED-VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
D +K ++ VL D +RP + DGG+I + S +DGV V L+GAC CPSST T+ G+ER
Sbjct: 101 DDISKRIEEVLNDKIRPAVAMDGGDIRLKSFKDGVAEVMLKGACAGCPSSTVTLKHGVER 160
Query: 135 VLK 137
++K
Sbjct: 161 MIK 163
>gi|355565754|gb|EHH22183.1| hypothetical protein EGK_05404 [Macaca mulatta]
gi|380789185|gb|AFE66468.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform 2
[Macaca mulatta]
gi|384941620|gb|AFI34415.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform 2
[Macaca mulatta]
Length = 254
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 9/134 (6%)
Query: 26 TKFNERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVD 83
TK NE L + +KP +++ S + PS AGS ++ A +
Sbjct: 122 TKENEDLDWNLLKPDIYATIMDFFASGLPLVTEETPSGEAGSE------EDDEVVAMIKE 175
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDA 143
L+ +RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L + +
Sbjct: 176 LLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNML-QFYIPE 234
Query: 144 IKDIRQVYDEEVRE 157
++ + QV D+E E
Sbjct: 235 VEGVEQVMDDESDE 248
>gi|336178676|ref|YP_004584051.1| iron-sulfur cluster assembly accessory protein [Frankia symbiont of
Datisca glomerata]
gi|334859656|gb|AEH10130.1| iron-sulfur cluster assembly accessory protein [Frankia symbiont of
Datisca glomerata]
Length = 198
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
D + VD ++ VRP+L DGG++ VV + GVVSV+L GACG C ++ T++ IER
Sbjct: 124 DTLWRQVDEAIQQVRPFLQRDGGDVTVVDITAGVVSVRLTGACGGCSAALDTLTGVIERQ 183
Query: 136 LKE 138
LKE
Sbjct: 184 LKE 186
>gi|150015239|ref|YP_001307493.1| NifU domain-containing protein [Clostridium beijerinckii NCIMB
8052]
gi|149901704|gb|ABR32537.1| nitrogen-fixing NifU domain protein [Clostridium beijerinckii NCIMB
8052]
Length = 73
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 86 LEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
L+ +RP L DGG++++V V DGVVSVK+QGACG+CP + T+ M IE+ LKE+
Sbjct: 9 LDKIRPMLQRDGGDVELVDVSNDGVVSVKMQGACGNCPGAMMTIKMIIEQKLKEEV 64
>gi|395841324|ref|XP_003793493.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 1 [Otolemur garnettii]
gi|395841326|ref|XP_003793494.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 2 [Otolemur garnettii]
Length = 229
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 9/134 (6%)
Query: 26 TKFNERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVD 83
TK NE L + +KP +++ S + PS AGS ++ A +
Sbjct: 97 TKENEELDWNLLKPDIYATIMDFYASGLPIVTEEAPSGEAGSE------EDDEVVAMIKE 150
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDA 143
L+ +RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L + +
Sbjct: 151 LLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNML-QFYIPE 209
Query: 144 IKDIRQVYDEEVRE 157
++ + QV D+E E
Sbjct: 210 VEGVEQVMDDESDE 223
>gi|355751378|gb|EHH55633.1| hypothetical protein EGM_04877 [Macaca fascicularis]
Length = 254
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 9/134 (6%)
Query: 26 TKFNERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVD 83
TK NE L + +KP +++ S + PS AGS ++ A +
Sbjct: 122 TKENEDLDWNLLKPDIYATIMDFFASGLPLVTEETPSGEAGSE------EDDEVVAMIKE 175
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDA 143
L+ +RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L + +
Sbjct: 176 LLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNML-QFYIPE 234
Query: 144 IKDIRQVYDEEVRE 157
++ + QV D+E E
Sbjct: 235 VEGVEQVMDDESDE 248
>gi|149278153|ref|ZP_01884291.1| hypothetical protein PBAL39_11367 [Pedobacter sp. BAL39]
gi|149230919|gb|EDM36300.1| hypothetical protein PBAL39_11367 [Pedobacter sp. BAL39]
Length = 100
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 70 YSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTM 128
+ + DLT + V+ LE +RPYLIADGGN+++ + + VV +KL G CGSC S TM
Sbjct: 15 FKITKMDLT-QQVEQALETIRPYLIADGGNVEIEEITAENVVKLKLLGNCGSCKMSFMTM 73
Query: 129 SMGIERVL 136
GIE+ +
Sbjct: 74 KAGIEQAI 81
>gi|2183204|gb|AAC33371.1| NifU [Cyanothece sp. PCC 8801]
Length = 294
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 39/53 (73%)
Query: 87 EDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
E+++P L DGG++++ VE +V V LQGACGSC SST T+ MGIE L+E+
Sbjct: 232 EEIKPALAKDGGDVELFDVEGDLVKVILQGACGSCASSTQTLKMGIEARLRER 284
>gi|373456668|ref|ZP_09548435.1| nitrogen-fixing NifU domain-containing protein [Caldithrix abyssi
DSM 13497]
gi|371718332|gb|EHO40103.1| nitrogen-fixing NifU domain-containing protein [Caldithrix abyssi
DSM 13497]
Length = 73
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 85 VLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
VLE +RP L ADGG+++ V + ED VV ++L GACG CP S T+ GIER++K
Sbjct: 8 VLESIRPGLQADGGDVEFVKIDEDNVVYIRLVGACGGCPMSQITLKQGIERIMK 61
>gi|402891129|ref|XP_003908810.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 2 [Papio anubis]
gi|380786363|gb|AFE65057.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform 2
[Macaca mulatta]
Length = 230
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 9/134 (6%)
Query: 26 TKFNERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVD 83
TK NE L + +KP +++ S + PS AGS ++ A +
Sbjct: 98 TKENEDLDWNLLKPDIYATIMDFFASGLPLVTEETPSGEAGSE------EDDEVVAMIKE 151
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDA 143
L+ +RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L + +
Sbjct: 152 LLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNML-QFYIPE 210
Query: 144 IKDIRQVYDEEVRE 157
++ + QV D+E E
Sbjct: 211 VEGVEQVMDDESDE 224
>gi|154291187|ref|XP_001546179.1| NifU-like protein [Botryotinia fuckeliana B05.10]
gi|347441876|emb|CCD34797.1| similar to HIRA-interacting protein 5 [Botryotinia fuckeliana]
Length = 313
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+ID EDG+V +KL+GAC +C SST T+ GIE +L + +
Sbjct: 209 ELLETRIRPAIQEDGGDIDYRGFEDGLVKLKLRGACRTCDSSTVTLKNGIEGMLMH-YIE 267
Query: 143 AIKDIRQVYDEE 154
+K + QV DEE
Sbjct: 268 EVKGVVQVLDEE 279
>gi|402891127|ref|XP_003908809.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 1 [Papio anubis]
Length = 254
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 9/134 (6%)
Query: 26 TKFNERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVD 83
TK NE L + +KP +++ S + PS AGS ++ A +
Sbjct: 122 TKENEDLDWNLLKPDIYATIMDFFASGLPLVTEETPSGEAGSE------EDDEVVAMIKE 175
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDA 143
L+ +RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L + +
Sbjct: 176 LLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNML-QFYIPE 234
Query: 144 IKDIRQVYDEEVRE 157
++ + QV D+E E
Sbjct: 235 VEGVEQVMDDESDE 248
>gi|402891131|ref|XP_003908811.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 3 [Papio anubis]
Length = 196
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 9/134 (6%)
Query: 26 TKFNERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVD 83
TK NE L + +KP +++ S + PS AGS ++ A +
Sbjct: 64 TKENEDLDWNLLKPDIYATIMDFFASGLPLVTEETPSGEAGSE------EDDEVVAMIKE 117
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDA 143
L+ +RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L+ +
Sbjct: 118 LLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQ-FYIPE 176
Query: 144 IKDIRQVYDEEVRE 157
++ + QV D+E E
Sbjct: 177 VEGVEQVMDDESDE 190
>gi|425772864|gb|EKV11248.1| NifU-related protein [Penicillium digitatum PHI26]
gi|425782025|gb|EKV19956.1| NifU-related protein [Penicillium digitatum Pd1]
Length = 311
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I+ EDG+V +KL+GAC +C SST T+ GIE +L + +
Sbjct: 208 ELLETRIRPAIQEDGGDIEFKGFEDGIVMLKLRGACRTCDSSTVTLKNGIESMLMH-YIE 266
Query: 143 AIKDIRQVYDEEVRETTVEVSALLLCLISDKRYYYTTAVPL 183
+K + Q DEE + E S L K T + PL
Sbjct: 267 EVKGVEQAMDEEEIISMHEFSKFEEKLRQQKGATATASAPL 307
>gi|410728255|ref|ZP_11366436.1| thioredoxin-like protein [Clostridium sp. Maddingley MBC34-26]
gi|410597194|gb|EKQ51827.1| thioredoxin-like protein [Clostridium sp. Maddingley MBC34-26]
Length = 73
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 86 LEDVRPYLIADGGNIDVVSVED-GVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
L+ VRP L DGG++++V V D GVVSVK+QGACG+CP + T+ M IE+ LKE+
Sbjct: 9 LDKVRPILQRDGGDVELVDVSDNGVVSVKMQGACGNCPGAMMTIKMIIEQRLKEEV 64
>gi|402771464|ref|YP_006591001.1| Scaffold protein Nfu/NifU [Methylocystis sp. SC2]
gi|401773484|emb|CCJ06350.1| Scaffold protein Nfu/NifU [Methylocystis sp. SC2]
Length = 185
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 46/79 (58%)
Query: 60 SAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACG 119
+APA SS Y + + A +L+ VRP + DGG+I +DGVV + ++GAC
Sbjct: 96 AAPAQSSGEFYDSADAETVATIKELIETRVRPAVAGDGGDIVFRGFKDGVVYLAMKGACS 155
Query: 120 SCPSSTTTMSMGIERVLKE 138
CPSST T+ GIE +LK
Sbjct: 156 GCPSSTATLRHGIENLLKH 174
>gi|407853600|gb|EKG06508.1| hypothetical protein TCSYLVIO_002386 [Trypanosoma cruzi]
Length = 280
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 55/104 (52%), Gaps = 18/104 (17%)
Query: 69 LYSAHQFDLTAKNVD---------LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACG 119
L S H D K+ D L+ +RP L ADGGN+ + ++DG V V L+GAC
Sbjct: 163 LLSGHNEDTEPKDDDDEVILAVKELLATRIRPMLQADGGNVRYLDMDDGTVFVLLEGACK 222
Query: 120 SCPSSTTTMSMGIERVLKEKFGDAIKDIRQVYDEEVRETTVEVS 163
SCPS++ T+ GIER+L + + EV+E T E++
Sbjct: 223 SCPSASVTLKNGIERMLMHWIPEVV---------EVQECTEEMA 257
>gi|71654974|ref|XP_816097.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70881201|gb|EAN94246.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 280
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 55/104 (52%), Gaps = 18/104 (17%)
Query: 69 LYSAHQFDLTAKNVD---------LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACG 119
L S H D K+ D L+ +RP L ADGGN+ + ++DG V V L+GAC
Sbjct: 163 LLSGHNEDTEPKDDDDEVILAVKELLATRIRPMLQADGGNVRYLDMDDGTVFVLLEGACK 222
Query: 120 SCPSSTTTMSMGIERVLKEKFGDAIKDIRQVYDEEVRETTVEVS 163
SCPS++ T+ GIER+L + + EV+E T E++
Sbjct: 223 SCPSASVTLKNGIERMLMHWIPEVV---------EVQECTEEMA 257
>gi|346994778|ref|ZP_08862850.1| NifU domain-containing protein [Ruegeria sp. TW15]
Length = 187
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 29 NERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVDLVL 86
++ +Q+ IKP +V++ S + + +N A AG + ++ ++ + DL+
Sbjct: 66 SDDVQWDHIKPAILGAVMEHYQS-DQPVMGANVDAGAGHAE--HTGEDAEIVHQIKDLLD 122
Query: 87 EDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIK 145
VRP + DGG+I + G+V + +QGAC CPSST T+ MGIE +L+ + I+
Sbjct: 123 SRVRPAVAQDGGDITFHGFDKGIVYLHMQGACAGCPSSTITLKMGIENLLRHYIPEVIE 181
>gi|189500939|ref|YP_001960409.1| nitrogen-fixing NifU domain-containing protein [Chlorobium
phaeobacteroides BS1]
gi|189496380|gb|ACE04928.1| nitrogen-fixing NifU domain protein [Chlorobium phaeobacteroides
BS1]
Length = 86
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 86 LEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
LE+VRPYL ADGG+ +V + +D +V VKL GACGSCP ST T+ G+E+ +K+
Sbjct: 22 LEEVRPYLQADGGDCQLVGITKDMLVDVKLLGACGSCPMSTLTLRAGVEQAIKK 75
>gi|440681698|ref|YP_007156493.1| Fe-S cluster assembly protein NifU [Anabaena cylindrica PCC 7122]
gi|428678817|gb|AFZ57583.1| Fe-S cluster assembly protein NifU [Anabaena cylindrica PCC 7122]
Length = 304
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 4/119 (3%)
Query: 26 TKFNERLQFISIKPKNSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVDLV 85
TK ++ ++ + + L +G T AS+ P L + + L K +D
Sbjct: 185 TKIDDIIREVKQETAKQTLNTNGVKATTEIASSMFNEGQQRP-LTNVQRIALIQKVLD-- 241
Query: 86 LEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
E+VRP LIADGG++++ +E V V L+GACGSC SST T+ + IE L+++ I
Sbjct: 242 -EEVRPVLIADGGDVELYDIEGNKVQVILKGACGSCSSSTATLKVAIEARLRDRINKEI 299
>gi|157804286|gb|ABV79889.1| NifU [Anabaena siamensis TISTR 8012]
Length = 195
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Query: 55 RASNPSAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKL 114
+A + G L + + L K +D E+VR LIADGG++++ +E V VKL
Sbjct: 104 KAKTEISSVGQQKPLTNVQKIALIQKVLD---EEVRLVLIADGGDVELYDIEGDKVKVKL 160
Query: 115 QGACGSCPSSTTTMSMGIERVLKEKF 140
QGACGSC SST T+ + IE L+++
Sbjct: 161 QGACGSCSSSTATLKIAIEARLRDRI 186
>gi|42521822|ref|NP_967202.1| nitrogen-fixing protein NifU [Bdellovibrio bacteriovorus HD100]
gi|39574352|emb|CAE77856.1| putative nitrogen-fixing protein NifU [Bdellovibrio bacteriovorus
HD100]
Length = 186
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 54/97 (55%)
Query: 51 ETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVV 110
+T + A NP+ L A + +++ + VRP L DGG++DVV ED +
Sbjct: 88 QTRMPAHNPAVTQMDEKKLRRASLPPEVQQIEEILDQTVRPGLQGDGGDLDVVKYEDNKL 147
Query: 111 SVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDI 147
V QGACG+CPS+T+ M IE +L+++F I+ I
Sbjct: 148 YVFYQGACGTCPSATSGTLMAIEGILRDQFNPTIEVI 184
>gi|407781036|ref|ZP_11128256.1| NifU-like protein domain protein [Oceanibaculum indicum P24]
gi|407208462|gb|EKE78380.1| NifU-like protein domain protein [Oceanibaculum indicum P24]
Length = 183
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 34/50 (68%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
VRP + DGG+I EDGVV + +QGAC CPSST T+ MGIE +LK
Sbjct: 122 VRPAVAQDGGDIVFKGFEDGVVYLHMQGACAGCPSSTATLKMGIENLLKH 171
>gi|317495423|ref|ZP_07953792.1| NifU domain-containing protein [Gemella morbillorum M424]
gi|316914482|gb|EFV35959.1| NifU domain-containing protein [Gemella morbillorum M424]
Length = 84
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
+D+ K + L LE +RP LIADGGNI+ ++ +DG++ ++ G C C S T+ IE+
Sbjct: 6 YDIVDK-IKLELEKIRPKLIADGGNIEFINYKDGILKIRFLGECAHCELSHITLKFAIEK 64
Query: 135 VLKEK 139
+KEK
Sbjct: 65 NIKEK 69
>gi|427792445|gb|JAA61674.1| Putative nifu-like domain-containing-containing protein, partial
[Rhipicephalus pulchellus]
Length = 257
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I + EDGVV +KLQG+C CPSS+ T+ GI+ +L + +
Sbjct: 165 ELIETRIRPTVQEDGGDIVYMGFEDGVVKLKLQGSCTGCPSSSVTLKAGIQNML-QFYVP 223
Query: 143 AIKDIRQVYDEEVRETTVEVSAL 165
+K + QV DE + + E L
Sbjct: 224 EVKSVEQVVDESEKVSNQEFQKL 246
>gi|384109792|ref|ZP_10010655.1| Thioredoxin-like protein [Treponema sp. JC4]
gi|383868667|gb|EID84303.1| Thioredoxin-like protein [Treponema sp. JC4]
Length = 89
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Query: 86 LEDVRPYLIADGGNIDVVSVED-GVVSVKLQGACGSCPSSTTTMSMGIERVLKE---KFG 141
LE RP L ADGG+++ V ++D G V +KL GACGSCP + T+ MGIER LK+ +
Sbjct: 14 LEMFRPQLQADGGDMEYVGIDDDGKVHLKLTGACGSCPMALMTLKMGIERYLKDACPEVT 73
Query: 142 DAIKDIRQVYDEEV 155
+ ++D Y EE+
Sbjct: 74 EVVQDNAPDYGEEM 87
>gi|325286802|ref|YP_004262592.1| nitrogen-fixing NifU domain-containing protein [Cellulophaga lytica
DSM 7489]
gi|324322256|gb|ADY29721.1| nitrogen-fixing NifU domain-containing protein [Cellulophaga lytica
DSM 7489]
Length = 300
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGV--VSVKLQGACGSCPSSTTTMSMGIE 133
D + + +D++ E V+P + +DGGNI S ++ V+V LQGAC CPSST T+ GIE
Sbjct: 222 DTSKQIIDILEEYVKPAVASDGGNIMFKSYDENTKKVNVILQGACSGCPSSTFTLKNGIE 281
Query: 134 RVLKEKFGDAIKDI 147
+LK GD I ++
Sbjct: 282 NMLKNMMGDKIGEV 295
>gi|406859769|gb|EKD12832.1| NifU-like protein [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 312
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 6/91 (6%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I+ E G+V++KL+GAC +C SST T+ GIE +L + +
Sbjct: 204 ELLETRIRPAIQEDGGDIEFRGFEGGIVNLKLRGACRTCDSSTVTLKNGIEGMLMH-YIE 262
Query: 143 AIKDIRQVYDEEVRETTVEVSALLLCLISDK 173
+K + QV D+E EVSAL +K
Sbjct: 263 EVKGVNQVLDQE-----EEVSALEFAKFEEK 288
>gi|156044806|ref|XP_001588959.1| hypothetical protein SS1G_10507 [Sclerotinia sclerotiorum 1980]
gi|154694895|gb|EDN94633.1| hypothetical protein SS1G_10507 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 372
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+ID EDG+V +KL+GAC +C SST T+ GIE +L + +
Sbjct: 210 ELLETRIRPAIQEDGGDIDYRGFEDGMVKLKLRGACRTCDSSTVTLKNGIEGMLMH-YIE 268
Query: 143 AIKDIRQVYDEE 154
+K + QV DEE
Sbjct: 269 EVKGVVQVMDEE 280
>gi|154339123|ref|XP_001562253.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062836|emb|CAM39281.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 282
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 55/92 (59%), Gaps = 12/92 (13%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP L ADGGN+ + +++G V + L+GAC SCPSS T+ GIER+L +
Sbjct: 188 ELLATRIRPMLRADGGNVRFIDMDEGTVFLLLEGACKSCPSSHITLKSGIERMLMHWIPE 247
Query: 143 AIKDIRQVYDEEVRETTVEVSALLLCLISDKR 174
+ EV+E + EV+A +L S+KR
Sbjct: 248 VV---------EVQEVSDEVAADIL---SEKR 267
>gi|411120957|ref|ZP_11393329.1| Modular FeS cluster scaffolding protein NifU [Oscillatoriales
cyanobacterium JSC-12]
gi|410709626|gb|EKQ67141.1| Modular FeS cluster scaffolding protein NifU [Oscillatoriales
cyanobacterium JSC-12]
Length = 293
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 41/58 (70%)
Query: 82 VDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
+ VL +VRP L+ADGG++++ +E VV V L+GACGSC SST T+ IE +KE+
Sbjct: 225 IQAVLHEVRPVLLADGGDVELYDIEGDVVKVVLKGACGSCESSTATLKNAIEVRIKER 282
>gi|426402182|ref|YP_007021153.1| nitrogen-fixing protein NifU [Bdellovibrio bacteriovorus str.
Tiberius]
gi|425858850|gb|AFX99885.1| putative nitrogen-fixing protein NifU [Bdellovibrio bacteriovorus
str. Tiberius]
Length = 165
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 54/97 (55%)
Query: 51 ETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVV 110
+T + A NP+ L A + +++ + VRP L DGG++DVV ED +
Sbjct: 67 QTRMPAHNPAVTQMDEKKLRRASLPPEVQQIEEILDQTVRPGLQGDGGDLDVVKYEDNKL 126
Query: 111 SVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDI 147
V QGACG+CPS+T+ M IE +L+++F I+ I
Sbjct: 127 YVFYQGACGTCPSATSGTLMAIEGILRDQFNPTIEVI 163
>gi|240279904|gb|EER43409.1| HIRA-interacting protein [Ajellomyces capsulatus H143]
gi|325093032|gb|EGC46342.1| HIRA-interacting protein [Ajellomyces capsulatus H88]
Length = 314
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I+ EDG+VS+KL+GAC +C SST T+ GIE +L + +
Sbjct: 211 ELLETRIRPAIQEDGGDIEFRGFEDGIVSLKLRGACRTCDSSTVTLKNGIESMLMH-YIE 269
Query: 143 AIKDIRQVYDEE 154
+K + V D+E
Sbjct: 270 EVKGVNHVLDQE 281
>gi|154281411|ref|XP_001541518.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411697|gb|EDN07085.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 279
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I+ EDG+VS+KL+GAC +C SST T+ GIE +L + +
Sbjct: 176 ELLETRIRPAIQEDGGDIEFRGFEDGIVSLKLRGACRTCDSSTVTLKNGIESMLMH-YIE 234
Query: 143 AIKDIRQVYDEE 154
+K + V D+E
Sbjct: 235 EVKGVNHVLDQE 246
>gi|221482460|gb|EEE20808.1| hypothetical protein TGGT1_065730 [Toxoplasma gondii GT1]
Length = 483
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 62/102 (60%), Gaps = 7/102 (6%)
Query: 65 SSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSV--EDGVVSVKLQGACGSCP 122
SSP S + L + V+ VLE VRPYL GGN+ +V + E +V + +GAC +CP
Sbjct: 248 SSPSASS--EVGLNSTMVEQVLESVRPYLRGHGGNVKLVELDSEKKIVRLAFKGACSTCP 305
Query: 123 SSTTTMSMGIERVLKEKFGD-AIKDIRQ--VYDEEVRETTVE 161
S+ T+ G++ L+E + D ++++ + V++EE++ T+E
Sbjct: 306 SAHQTLYEGLQGALREVWPDLSVEEAKDDGVWEEELQPLTIE 347
>gi|70990736|ref|XP_750217.1| NifU-related protein [Aspergillus fumigatus Af293]
gi|66847849|gb|EAL88179.1| NifU-related protein [Aspergillus fumigatus Af293]
gi|159130693|gb|EDP55806.1| NifU-related protein [Aspergillus fumigatus A1163]
Length = 326
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I++ E+G+V +KL+GAC +C SST T+ GIE +L + +
Sbjct: 219 ELLETRIRPAIQEDGGDIELRGFENGIVKLKLRGACRTCDSSTVTLKNGIESMLMH-YIE 277
Query: 143 AIKDIRQVYDEE 154
++ + QV DEE
Sbjct: 278 EVQGVEQVLDEE 289
>gi|152993863|ref|YP_001359584.1| hypothetical protein SUN_2287 [Sulfurovum sp. NBC37-1]
gi|151425724|dbj|BAF73227.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 92
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 40/53 (75%)
Query: 85 VLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
V+E VRP + DGG+I++V ++DGVV V+LQGAC C S+ TT+ G+ER LK
Sbjct: 16 VIEKVRPSIKLDGGDIELVDIKDGVVYVQLQGACVGCGSAGTTIKFGVERQLK 68
>gi|119496847|ref|XP_001265197.1| NifU-related protein [Neosartorya fischeri NRRL 181]
gi|119413359|gb|EAW23300.1| NifU-related protein [Neosartorya fischeri NRRL 181]
Length = 326
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I++ E+G+V +KL+GAC +C SST T+ GIE +L + +
Sbjct: 219 ELLETRIRPAIQEDGGDIELRGFENGIVKLKLRGACRTCDSSTVTLKNGIESMLMH-YIE 277
Query: 143 AIKDIRQVYDEE 154
++ + QV DEE
Sbjct: 278 EVQGVEQVLDEE 289
>gi|121702857|ref|XP_001269693.1| NifU-related protein [Aspergillus clavatus NRRL 1]
gi|119397836|gb|EAW08267.1| NifU-related protein [Aspergillus clavatus NRRL 1]
Length = 320
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I++ E+G+V +KL+GAC +C SST T+ GIE +L + +
Sbjct: 213 ELLETRIRPAIQEDGGDIELRGFENGIVKLKLRGACRTCDSSTVTLKNGIESMLM-HYIE 271
Query: 143 AIKDIRQVYDEE 154
++ + QV DEE
Sbjct: 272 EVQGVEQVLDEE 283
>gi|332877772|ref|ZP_08445513.1| NifU-like protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332684352|gb|EGJ57208.1| NifU-like protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 298
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 82 VDLVLEDVRPYLIADGGNIDVVSVEDGV--VSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
V ++ E V+P + +DGGNI +S + V V LQGAC CPSST T+ GIE +LK K
Sbjct: 228 VAIIEEHVKPAVASDGGNIQFISYQPDTHHVEVLLQGACSGCPSSTQTLKKGIEAILKNK 287
Query: 140 FGD 142
G+
Sbjct: 288 LGN 290
>gi|282901488|ref|ZP_06309413.1| Fe-S cluster assembly protein NifU [Cylindrospermopsis raciborskii
CS-505]
gi|281193767|gb|EFA68739.1| Fe-S cluster assembly protein NifU [Cylindrospermopsis raciborskii
CS-505]
Length = 308
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 69 LYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTM 128
L + + L K +D E+VRP LIADGG++++ +E V V L+GACGSC SST T+
Sbjct: 231 LTNVQKIALIQKVLD---EEVRPVLIADGGDVELYDIEGNKVKVILKGACGSCSSSTATL 287
Query: 129 SMGIERVLKEKFGDAI 144
+ IE L+E+ I
Sbjct: 288 KIAIESRLRERVNKEI 303
>gi|149186788|ref|ZP_01865099.1| hypothetical protein ED21_29856 [Erythrobacter sp. SD-21]
gi|148829696|gb|EDL48136.1| hypothetical protein ED21_29856 [Erythrobacter sp. SD-21]
Length = 193
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 41/63 (65%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
D+ A+ +L+ VRP + DGG+I +DGVV ++LQGAC CPSST T+ GIE +
Sbjct: 120 DIVAQINELLETRVRPAVAGDGGDIQYRGFKDGVVYLQLQGACSGCPSSTATLKHGIEGL 179
Query: 136 LKE 138
LK
Sbjct: 180 LKH 182
>gi|225563079|gb|EEH11358.1| HIRA-interacting protein [Ajellomyces capsulatus G186AR]
Length = 314
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I+ EDG+VS+KL+GAC +C SST T+ GIE +L + +
Sbjct: 211 ELLETRIRPAIQEDGGDIEFRGFEDGIVSLKLRGACRTCDSSTVTLKNGIESMLMH-YIE 269
Query: 143 AIKDIRQVYDEE 154
+K + V D+E
Sbjct: 270 EVKGVNHVLDQE 281
>gi|159466680|ref|XP_001691526.1| iron-sulfur cluster assembly protein [Chlamydomonas reinhardtii]
gi|158278872|gb|EDP04634.1| iron-sulfur cluster assembly protein [Chlamydomonas reinhardtii]
Length = 489
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 63/94 (67%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
+L+ + V L++VRPYL ADGG+++VV VE+GVV ++LQGAC SCPS + TM GIER
Sbjct: 339 ELSVEAVTAALDEVRPYLEADGGDVEVVEVENGVVYLRLQGACSSCPSQSATMKGGIERA 398
Query: 136 LKEKFGDAIKDIRQVYDEEVRETTVEVSALLLCL 169
++ FGD ++DI Q+ +E T V L L
Sbjct: 399 IRNAFGDQVRDILQLDAKEPAATAEAVDRQLDML 432
>gi|343086121|ref|YP_004775416.1| nitrogen-fixing NifU domain-containing protein [Cyclobacterium
marinum DSM 745]
gi|342354655|gb|AEL27185.1| nitrogen-fixing NifU domain-containing protein [Cyclobacterium
marinum DSM 745]
Length = 82
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIE 133
D ++ L+ +RPYL ADGGN+ +V + ED V+ ++L GAC SCP ST T+ G+E
Sbjct: 2 LDQYKDQIEKALDTIRPYLEADGGNVKIVDLSEDMVLQLELTGACSSCPMSTMTLKAGVE 61
Query: 134 RVLKEKFGDAIK 145
+K+ + I+
Sbjct: 62 EAIKKAIPEIIR 73
>gi|269928406|ref|YP_003320727.1| nitrogen-fixing NifU domain-containing protein [Sphaerobacter
thermophilus DSM 20745]
gi|269787763|gb|ACZ39905.1| nitrogen-fixing NifU domain protein [Sphaerobacter thermophilus DSM
20745]
Length = 290
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 65/151 (43%), Gaps = 16/151 (10%)
Query: 10 TRISKTPTISSKSQFPTKFNERLQFISIKPKNSVLQKSGSHETAIRASNPSAPAGSSPGL 69
RI P + Q E L F G + A +P+ PA +
Sbjct: 21 ARIESFPEPELRDQALGAIQELLAFYG--------DGLGRALAILVARDPTLPAALAEDE 72
Query: 70 YSAHQFDLTA-------KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCP 122
AH L + V L+ VRPYL + GG++D++ + DGV V+L+G C CP
Sbjct: 73 LVAHILLLHGLHPVPVEERVGQALDRVRPYLHSHGGDVDLLEIVDGVARVRLRGTCRGCP 132
Query: 123 SSTTTMSMGIERVLKEKFGDAIKDIRQVYDE 153
+S T+ + IER + E D + I V D+
Sbjct: 133 ASAVTLRLAIERAVHELAPD-LDGIEAVTDD 162
>gi|391334432|ref|XP_003741608.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Metaseiulus occidentalis]
Length = 253
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 60 SAPAGSSPGL----YSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQ 115
S P G S GL + TA +L+ +RP ++ DGG+I + + +DG+V ++LQ
Sbjct: 134 SEPVGDSGGLSNVDFEEKDQQTTAMIAELIDSRIRPTVMEDGGDIVLRAFKDGIVELELQ 193
Query: 116 GACGSCPSSTTTMSMGIERVL 136
G+C +CPSS+ T+ GIE +L
Sbjct: 194 GSCTNCPSSSVTLKAGIENML 214
>gi|67633331|gb|AAY78582.1| predicted thioredoxin-like protein [uncultured bacterium
MedeBAC82F10]
Length = 185
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 70 YSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMS 129
Y + D+ K +L+ VRP + DGG+I +G+V +++QGAC CPSST T+
Sbjct: 104 YDENDSDVVKKIKELLDTKVRPAVAMDGGDIIFDKYNEGIVFLQMQGACQGCPSSTATLK 163
Query: 130 MGIERVLKEKFGDAIKDIRQV 150
MGIE +LK I ++R+V
Sbjct: 164 MGIENMLKH----YIPEVREV 180
>gi|410583627|ref|ZP_11320732.1| thioredoxin-like protein [Thermaerobacter subterraneus DSM 13965]
gi|410504489|gb|EKP93999.1| thioredoxin-like protein [Thermaerobacter subterraneus DSM 13965]
Length = 73
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V+ LE +RP + DGG+I++V V E+GVV V+L GAC CP S T+ GIER+L+E
Sbjct: 3 EQVEQALESIRPAIQMDGGDIELVDVDENGVVRVRLIGACVGCPMSIMTLKAGIERILRE 62
Query: 139 KF 140
+
Sbjct: 63 RV 64
>gi|4680705|gb|AAD27742.1|AF132967_1 CGI-33 protein [Homo sapiens]
Length = 231
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 9/134 (6%)
Query: 26 TKFNERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVD 83
TK NE L + +KP +++ S + P AGS ++ A +
Sbjct: 99 TKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPPGEAGSE------EDDEVVAMIKE 152
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDA 143
L+ +RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L + +
Sbjct: 153 LLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNML-QFYIPE 211
Query: 144 IKDIRQVYDEEVRE 157
++ + QV D+E E
Sbjct: 212 VEGVEQVMDDESDE 225
>gi|220907771|ref|YP_002483082.1| Fe-S cluster assembly protein NifU [Cyanothece sp. PCC 7425]
gi|219864382|gb|ACL44721.1| Fe-S cluster assembly protein NifU [Cyanothece sp. PCC 7425]
Length = 296
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 40/53 (75%)
Query: 87 EDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
E+VRP L+ADGG++++ VE VV V L+GACG+C SST T+ + IE L+E+
Sbjct: 231 EEVRPVLMADGGDVELYDVEGDVVKVLLKGACGNCSSSTATLKIAIEARLQER 283
>gi|305665213|ref|YP_003861500.1| NifU-like protein [Maribacter sp. HTCC2170]
gi|88709966|gb|EAR02198.1| nifU related protein [Maribacter sp. HTCC2170]
Length = 300
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGV--VSVKLQGACGSCPSSTTTMSMGIE 133
D + + VD++ E V+P + +DGGNI S E V+V LQGAC CPSST T+ GIE
Sbjct: 222 DTSKQIVDILEEYVKPAVASDGGNILFQSYEKDTKTVNVILQGACSGCPSSTFTLKNGIE 281
Query: 134 RVLKEKFGDAIKDI 147
+LK GD + ++
Sbjct: 282 TMLKNMMGDKVNEV 295
>gi|428209492|ref|YP_007093845.1| Modular FeS cluster scaffolding protein NifU [Chroococcidiopsis
thermalis PCC 7203]
gi|428011413|gb|AFY89976.1| Modular FeS cluster scaffolding protein NifU [Chroococcidiopsis
thermalis PCC 7203]
Length = 295
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 69 LYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTM 128
L + + L K +D E+VRP LIADGG++++ V+ V V LQGACGSC SST T+
Sbjct: 218 LTNVQKIALIQKVLD---EEVRPLLIADGGDVELYDVDGDRVQVLLQGACGSCSSSTATL 274
Query: 129 SMGIERVLKEK 139
+ IE L+E+
Sbjct: 275 KVAIEAKLQER 285
>gi|406707466|ref|YP_006757818.1| NifU family protein,scaffold protein, Nfu/NifU family [alpha
proteobacterium HIMB59]
gi|406653242|gb|AFS48641.1| NifU family protein,scaffold protein, Nfu/NifU family [alpha
proteobacterium HIMB59]
Length = 185
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 70 YSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMS 129
Y + D+ K +L+ VRP + DGG+I +G+V +++QGAC CPSST T+
Sbjct: 104 YDENDSDVVKKIKELLDTKVRPAVAMDGGDIIFDKYNEGIVFLQMQGACQGCPSSTATLK 163
Query: 130 MGIERVLKEKFGDAIKDIRQV 150
MGIE +LK I ++R+V
Sbjct: 164 MGIENMLKH----YIPEVREV 180
>gi|241890053|ref|ZP_04777351.1| Fe/S biogenesis protein NfuA [Gemella haemolysans ATCC 10379]
gi|241863675|gb|EER68059.1| Fe/S biogenesis protein NfuA [Gemella haemolysans ATCC 10379]
Length = 84
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 78 TAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
T + + LE +RP LI DGGNI+ ++ +DG++ V+ G C C S T+ IE+ L
Sbjct: 8 TVEKIKFELEKIRPKLIMDGGNIEFINYKDGILKVRFLGECAHCELSHITLKYAIEKTLI 67
Query: 138 EKFGDAIKDIRQV 150
EK + IK + QV
Sbjct: 68 EKIPE-IKKVLQV 79
>gi|242802633|ref|XP_002484010.1| NifU-related protein [Talaromyces stipitatus ATCC 10500]
gi|218717355|gb|EED16776.1| NifU-related protein [Talaromyces stipitatus ATCC 10500]
Length = 321
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I+ E+G+V +KL+GAC +C SST T+ GIE +L + +
Sbjct: 217 ELLETRIRPAIQEDGGDIEFRGFENGIVLLKLRGACRTCDSSTVTLKNGIESMLMH-YIE 275
Query: 143 AIKDIRQVYDEEVRETTVEVSALLLCLISDKRYYYTTAVPL 183
++ ++QV D+E + E + L K TT+ PL
Sbjct: 276 EVQGVQQVLDQEEEVSMHEFAKFEEKLRQQKGPGATTSSPL 316
>gi|78186286|ref|YP_374329.1| NifU protein [Chlorobium luteolum DSM 273]
gi|78166188|gb|ABB23286.1| NifU protein, putative [Chlorobium luteolum DSM 273]
Length = 89
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 86 LEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
LE VRPYL DGG+ +V + +D VV VKL GACGSCP ST T+ G+E+ +K+ + +
Sbjct: 25 LETVRPYLQVDGGDCQLVGITKDMVVDVKLLGACGSCPMSTLTLRAGVEQAIKKAIPEIV 84
Query: 145 K 145
+
Sbjct: 85 R 85
>gi|332296888|ref|YP_004438810.1| nitrogen-fixing NifU domain-containing protein [Treponema
brennaborense DSM 12168]
gi|332179991|gb|AEE15679.1| nitrogen-fixing NifU domain-containing protein [Treponema
brennaborense DSM 12168]
Length = 76
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 45/66 (68%), Gaps = 5/66 (7%)
Query: 86 LEDVRPYLIADGGNIDVVSVE-DGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
L+ +RP L ADGG+++ VS+E G V VKL GACG+CP +T T+ G+ER LK D I
Sbjct: 11 LDKIRPQLQADGGDLEFVSMEAGGKVFVKLTGACGNCPMATMTLKQGVERFLK----DTI 66
Query: 145 KDIRQV 150
++ +V
Sbjct: 67 PEVTEV 72
>gi|307153502|ref|YP_003888886.1| Fe-S cluster assembly protein NifU [Cyanothece sp. PCC 7822]
gi|306983730|gb|ADN15611.1| Fe-S cluster assembly protein NifU [Cyanothece sp. PCC 7822]
Length = 297
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Query: 82 VDLVLE-DVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
++ VLE +VRP L+ADGGN+++ +E +V V L+GACGSC ST T+ + IE LKE
Sbjct: 229 IERVLEQEVRPILMADGGNVELYDLEGEIVKVVLKGACGSCAGSTATLKIAIEAKLKE 286
>gi|386747896|ref|YP_006221104.1| hypothetical protein HCD_04400 [Helicobacter cetorum MIT 99-5656]
gi|384554138|gb|AFI05894.1| hypothetical protein HCD_04400 [Helicobacter cetorum MIT 99-5656]
Length = 89
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 40/58 (68%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
K V +V+E +RPYL+ DGGN++V+ V+ V V LQGAC +C SS T+ IER LK
Sbjct: 11 KPVHIVIEKIRPYLLKDGGNVEVLGVKSMKVYVTLQGACKTCSSSKVTLKNVIERQLK 68
>gi|381187256|ref|ZP_09894821.1| nifU-like protein [Flavobacterium frigoris PS1]
gi|379650866|gb|EIA09436.1| nifU-like protein [Flavobacterium frigoris PS1]
Length = 299
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query: 74 QFDLTAKNVDLVLED-VRPYLIADGGNI--DVVSVEDGVVSVKLQGACGSCPSSTTTMSM 130
+ D+T++ + +LE+ V+P + ADGGNI D + D VV V LQGAC CPSST T+
Sbjct: 218 KLDVTSQQIINILEEYVKPAVAADGGNIIFDSYNESDKVVKVVLQGACSGCPSSTFTLKS 277
Query: 131 GIERVLKEKFGD 142
GIE +LK D
Sbjct: 278 GIENMLKSMLND 289
>gi|90421987|ref|YP_530357.1| nitrogen-fixing NifU-like protein [Rhodopseudomonas palustris
BisB18]
gi|90104001|gb|ABD86038.1| nitrogen-fixing NifU-like [Rhodopseudomonas palustris BisB18]
Length = 188
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
DL+ VRP + DGG+I +DG+V +K+QGAC CPSST T+ GI+ +LK F
Sbjct: 122 DLIETRVRPAVANDGGDITFRGFKDGIVYLKMQGACSGCPSSTATLQHGIQNLLKH-FVP 180
Query: 143 AIKDIRQV 150
A+ ++R +
Sbjct: 181 AVVEVRPI 188
>gi|436840601|ref|YP_007324979.1| Nitrogen fixation protein nifU [Desulfovibrio hydrothermalis AM13 =
DSM 14728]
gi|432169507|emb|CCO22875.1| Nitrogen fixation protein nifU [Desulfovibrio hydrothermalis AM13 =
DSM 14728]
Length = 279
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Query: 55 RASNPSAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKL 114
+ + P+A + L + +F L ++ +D E++RP L DGG+I+++ +E V V L
Sbjct: 188 KVAEPAAEPEKAVKLTNIKRFQLVSQTID---EEIRPALNKDGGDIELIDIEGSEVIVSL 244
Query: 115 QGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
+GAC CPSS T+ +ER LKE +AI
Sbjct: 245 RGACVGCPSSGHTIKEFVERRLKETVEEAI 274
>gi|407420833|gb|EKF38692.1| hypothetical protein MOQ_001104 [Trypanosoma cruzi marinkellei]
Length = 280
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 9/81 (11%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP L ADGGN+ + ++DG V V L+GAC SCPS++ T+ GIER+L +
Sbjct: 186 ELLATRIRPMLQADGGNVRYLDMDDGTVFVLLEGACKSCPSASVTLKNGIERMLMHWIPE 245
Query: 143 AIKDIRQVYDEEVRETTVEVS 163
+ EV+E T E++
Sbjct: 246 VV---------EVQECTEEMA 257
>gi|392398863|ref|YP_006435464.1| thioredoxin-like protein [Flexibacter litoralis DSM 6794]
gi|390529941|gb|AFM05671.1| thioredoxin-like protein [Flexibacter litoralis DSM 6794]
Length = 87
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
+ V+ LE VRPYL ADGG++ V+ + EDG+V V++ GACGSC S T+ GIE+ +
Sbjct: 5 EKVEAALETVRPYLKADGGDVKVIEITEDGIVKVEMIGACGSCSISPITLKTGIEQAI 62
>gi|218961333|ref|YP_001741108.1| NifU-like domain protein [Candidatus Cloacamonas acidaminovorans]
gi|167729990|emb|CAO80902.1| NifU-like domain protein [Candidatus Cloacamonas acidaminovorans
str. Evry]
Length = 75
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
+ + ++ +L VRP + ADGG+++++++ ED V+ V+L+G C CP +T T+ GIER+
Sbjct: 2 IAKEKIESILAKVRPSIQADGGDVELINIREDNVIEVRLKGTCNGCPMATLTLKAGIERL 61
Query: 136 LKEKF 140
+KE+
Sbjct: 62 IKEEI 66
>gi|399029207|ref|ZP_10730228.1| thioredoxin-like protein [Flavobacterium sp. CF136]
gi|398072996|gb|EJL64185.1| thioredoxin-like protein [Flavobacterium sp. CF136]
Length = 299
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query: 74 QFDLTAKNVDLVLED-VRPYLIADGGNI--DVVSVEDGVVSVKLQGACGSCPSSTTTMSM 130
+ D+T++ + +LE+ V+P + ADGGNI D + D VV V LQGAC CPSST T+
Sbjct: 218 KLDVTSQQIINILEEYVKPAVAADGGNIAFDSYNETDKVVKVILQGACSGCPSSTFTLKS 277
Query: 131 GIERVLKEKFGD 142
GIE +LK D
Sbjct: 278 GIENMLKSMLND 289
>gi|146299436|ref|YP_001194027.1| NifU domain-containing protein [Flavobacterium johnsoniae UW101]
gi|146153854|gb|ABQ04708.1| nitrogen-fixing NifU domain protein [Flavobacterium johnsoniae
UW101]
Length = 299
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 4/76 (5%)
Query: 74 QFDLTAKNVDLVLED-VRPYLIADGGNI--DVVSVEDGVVSVKLQGACGSCPSSTTTMSM 130
+ D+T++ + +LE+ V+P + ADGGNI D + +D V V LQGAC CPSST T+
Sbjct: 218 KLDVTSQQIINILEEYVKPAVAADGGNIAFDSYNEDDKTVKVILQGACSGCPSSTFTLKS 277
Query: 131 GIERVLKEKFGD-AIK 145
GIE +LK D AIK
Sbjct: 278 GIENMLKSMLNDEAIK 293
>gi|346471251|gb|AEO35470.1| hypothetical protein [Amblyomma maculatum]
Length = 259
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I + EDGVV +KLQG+C CPSS+ T+ GI+ +L + +
Sbjct: 167 ELIETRIRPTVQEDGGDILYMGFEDGVVKLKLQGSCTGCPSSSVTLKAGIQNML-QFYVP 225
Query: 143 AIKDIRQVYDE 153
+K + QV DE
Sbjct: 226 EVKSVEQVVDE 236
>gi|145219268|ref|YP_001129977.1| NifU domain-containing protein [Chlorobium phaeovibrioides DSM 265]
gi|145205432|gb|ABP36475.1| nitrogen-fixing NifU domain protein [Chlorobium phaeovibrioides DSM
265]
Length = 86
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 86 LEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
LE VRPYL DGG+ +V + +D VV VKL GACGSCP ST T+ G+E+ +K+ + +
Sbjct: 22 LETVRPYLQVDGGDCQLVGISKDMVVDVKLLGACGSCPMSTLTLRAGVEQAIKKAIPEIV 81
Query: 145 K 145
+
Sbjct: 82 R 82
>gi|354491749|ref|XP_003508017.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Cricetulus griseus]
Length = 251
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 9/134 (6%)
Query: 26 TKFNERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVD 83
TK NE L + +KP +++ S + P AGS ++ A +
Sbjct: 119 TKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPPGEAGSE------EDDEVVAMIKE 172
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDA 143
L+ +RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L + +
Sbjct: 173 LLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNML-QFYIPE 231
Query: 144 IKDIRQVYDEEVRE 157
++ + QV D+E E
Sbjct: 232 VEGVEQVMDDESDE 245
>gi|238486392|ref|XP_002374434.1| NifU-related protein [Aspergillus flavus NRRL3357]
gi|317144282|ref|XP_003189583.1| nifU-related protein [Aspergillus oryzae RIB40]
gi|220699313|gb|EED55652.1| NifU-related protein [Aspergillus flavus NRRL3357]
Length = 329
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I++ E+G+V +KL+GAC +C SST T+ GIE +L + +
Sbjct: 222 ELLETRIRPAIQEDGGDIELRGFENGIVMLKLRGACRTCDSSTVTLKNGIESMLM-HYIE 280
Query: 143 AIKDIRQVYDEE 154
++ + QV DEE
Sbjct: 281 EVQGVEQVMDEE 292
>gi|427715432|ref|YP_007063426.1| Fe-S cluster assembly protein NifU [Calothrix sp. PCC 7507]
gi|427347868|gb|AFY30592.1| Fe-S cluster assembly protein NifU [Calothrix sp. PCC 7507]
Length = 305
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 39/53 (73%)
Query: 87 EDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
E+VRP LIADGG++++ +E V V LQGACGSC SST T+ + IE L+++
Sbjct: 239 EEVRPVLIADGGDVELYDIEGDRVKVLLQGACGSCSSSTATLKIAIEARLRDR 291
>gi|300785684|ref|YP_003765975.1| thioredoxin-like protein [Amycolatopsis mediterranei U32]
gi|384148990|ref|YP_005531806.1| thioredoxin-like protein [Amycolatopsis mediterranei S699]
gi|399537568|ref|YP_006550230.1| thioredoxin-like protein [Amycolatopsis mediterranei S699]
gi|299795198|gb|ADJ45573.1| thioredoxin-like protein [Amycolatopsis mediterranei U32]
gi|340527144|gb|AEK42349.1| thioredoxin-like protein [Amycolatopsis mediterranei S699]
gi|398318338|gb|AFO77285.1| thioredoxin-like protein [Amycolatopsis mediterranei S699]
Length = 172
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 78 TAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
T + V L+ VRPYL + G+++ V + DGV+ ++LQG C CPSST T IERV++
Sbjct: 76 THERVTEALDKVRPYLGSHAGDVEFVEIADGVLRLRLQGTCDGCPSSTVTAKYAIERVVR 135
Query: 138 E 138
E
Sbjct: 136 E 136
>gi|254453730|ref|ZP_05067167.1| NifU domain protein [Octadecabacter arcticus 238]
gi|198268136|gb|EDY92406.1| NifU domain protein [Octadecabacter arcticus 238]
Length = 186
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 2/109 (1%)
Query: 30 ERLQFISIKPKNSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVDLVLEDV 89
+ +++ IKP ++L H + A AGS ++ D+ + +L+ V
Sbjct: 67 DDVEWDHIKP--AILGAVMEHYQSGAAVMTGEQAGSGHAEHTGEDADIVNQIKELLDTRV 124
Query: 90 RPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
RP + DGG+I + GVV + +QGAC CPSST T+ MGIE +L+
Sbjct: 125 RPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRH 173
>gi|386348016|ref|YP_006046265.1| nitrogen-fixing NifU domain-containing protein [Spirochaeta
thermophila DSM 6578]
gi|339412983|gb|AEJ62548.1| nitrogen-fixing NifU domain-containing protein [Spirochaeta
thermophila DSM 6578]
Length = 74
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
+T +V+ V+ ++RP L ADGG+I ++ V E GVV V+L GAC CP S T+ G+E
Sbjct: 1 MTKTDVEKVINEIRPALKADGGDIQLLEVTEQGVVKVRLTGACHGCPMSQITLKQGVEAY 60
Query: 136 LKEKF 140
LK K
Sbjct: 61 LKRKL 65
>gi|186680943|ref|YP_001864139.1| Fe-S cluster assembly protein NifU [Nostoc punctiforme PCC 73102]
gi|186463395|gb|ACC79196.1| Fe-S cluster assembly protein NifU [Nostoc punctiforme PCC 73102]
Length = 299
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 39/53 (73%)
Query: 87 EDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
E+VRP LIADGG++++ VE V V LQGACGSC SST T+ + IE L+++
Sbjct: 237 EEVRPVLIADGGDVELYDVEGDRVKVVLQGACGSCSSSTATLKIAIEARLQDR 289
>gi|340517830|gb|EGR48073.1| predicted protein [Trichoderma reesei QM6a]
Length = 294
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 70 YSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMS 129
Y+ + ++ +L+ +RP + DGG+I+ EDG V +KL+GAC +C SST T+
Sbjct: 186 YNENDSEVVGMIKELLETRIRPAIQEDGGDIEFRGFEDGQVLLKLRGACRTCDSSTVTLK 245
Query: 130 MGIERVLKEKFGDAIKDIRQVYDEE 154
GIE +L + + +K ++Q+ DEE
Sbjct: 246 NGIEGMLMH-YIEEVKGVKQILDEE 269
>gi|124009117|ref|ZP_01693800.1| conserved domain protein [Microscilla marina ATCC 23134]
gi|123985331|gb|EAY25251.1| conserved domain protein [Microscilla marina ATCC 23134]
Length = 84
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ VD L+ +RPYL DGG++ V+ V EDGVV ++L G+CGSCP S T+ GIE +++
Sbjct: 9 ERVDNALDTIRPYLKTDGGDVKVLEVSEDGVVKLELMGSCGSCPMSAMTLKAGIEESIRK 68
>gi|119357807|ref|YP_912451.1| NifU domain-containing protein [Chlorobium phaeobacteroides DSM
266]
gi|119355156|gb|ABL66027.1| nitrogen-fixing NifU domain protein [Chlorobium phaeobacteroides
DSM 266]
Length = 86
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 45/66 (68%), Gaps = 5/66 (7%)
Query: 86 LEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
LE VRPYL DGG+ +V + +D VV VKL GACGSCP ST T+ G+E+ +K+ AI
Sbjct: 22 LETVRPYLQVDGGDCQLVGISKDMVVDVKLLGACGSCPMSTLTLRAGVEQAIKK----AI 77
Query: 145 KDIRQV 150
+I +V
Sbjct: 78 PEIARV 83
>gi|441501101|ref|ZP_20983232.1| hypothetical protein C900_00264 [Fulvivirga imtechensis AK7]
gi|441435110|gb|ELR68523.1| hypothetical protein C900_00264 [Fulvivirga imtechensis AK7]
Length = 101
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIER 134
DL K +D L+++RPYL DGG++ ++ + +D VV ++L GACGSCP ST T+ G+E
Sbjct: 11 DLIQK-IDAALDNIRPYLRTDGGDVKILEITDDMVVKLELMGACGSCPMSTMTLKAGVEE 69
Query: 135 VLKE 138
+++
Sbjct: 70 AIRK 73
>gi|392407046|ref|YP_006443654.1| thioredoxin-like protein [Anaerobaculum mobile DSM 13181]
gi|390620182|gb|AFM21329.1| thioredoxin-like protein [Anaerobaculum mobile DSM 13181]
Length = 80
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Query: 80 KNVDLVLE-DVRPYLIADGGNIDVVSVEDG--VVSVKLQGACGSCPSSTTTMSMGIERVL 136
KN+ V+E D+RP L++ GG+I++VS ++ V V+L GACG CP + T+ +E VL
Sbjct: 6 KNISEVIESDIRPALMSHGGDIELVSYDEAEKKVFVRLTGACGGCPFARETLRFQVESVL 65
Query: 137 KEKFGDAIKDIRQV 150
KE+ +A+K + V
Sbjct: 66 KERLPNAVKSVESV 79
>gi|406912072|gb|EKD51745.1| hypothetical protein ACD_62C00187G0002 [uncultured bacterium]
Length = 83
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 80 KNVDLVLED-VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
K ++ +L+ +RP L ADGGN++V+S+E + V+ QGAC CP + T M IE VLK+
Sbjct: 13 KKIEAILDKKIRPMLQADGGNLEVLSLEGNTLGVRYQGACCGCPHAATGTLMAIESVLKD 72
Query: 139 KFGDAIKDIRQ 149
++ IK + Q
Sbjct: 73 EYNPDIKVVPQ 83
>gi|268317872|ref|YP_003291591.1| nitrogen-fixing NifU domain-containing protein [Rhodothermus
marinus DSM 4252]
gi|345304151|ref|YP_004826053.1| nitrogen-fixing NifU domain-containing protein [Rhodothermus
marinus SG0.5JP17-172]
gi|262335406|gb|ACY49203.1| nitrogen-fixing NifU domain protein [Rhodothermus marinus DSM 4252]
gi|345113384|gb|AEN74216.1| nitrogen-fixing NifU domain-containing protein [Rhodothermus
marinus SG0.5JP17-172]
Length = 96
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
+ ++ L+ +RPYL+ DGG++ +++V ED VV ++L GACG+CP S T+ GIE+VLK
Sbjct: 22 RRIEEALDMIRPYLMTDGGSVRLLNVTEDYVVELELLGACGTCPMSLMTLRAGIEQVLK 80
>gi|189345962|ref|YP_001942491.1| nitrogen-fixing NifU domain-containing protein [Chlorobium limicola
DSM 245]
gi|189340109|gb|ACD89512.1| nitrogen-fixing NifU domain protein [Chlorobium limicola DSM 245]
Length = 86
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 45/66 (68%), Gaps = 5/66 (7%)
Query: 86 LEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
LE VRPYL DGG+ +V + +D VV VKL GACGSCP ST T+ G+E+ +K+ AI
Sbjct: 22 LETVRPYLQVDGGDCQLVGITKDMVVDVKLLGACGSCPMSTITLRAGVEQAIKK----AI 77
Query: 145 KDIRQV 150
+I +V
Sbjct: 78 PEIARV 83
>gi|67516331|ref|XP_658051.1| hypothetical protein AN0447.2 [Aspergillus nidulans FGSC A4]
gi|40747390|gb|EAA66546.1| hypothetical protein AN0447.2 [Aspergillus nidulans FGSC A4]
gi|259489306|tpe|CBF89467.1| TPA: NifU-related protein (AFU_orthologue; AFUA_1G04680)
[Aspergillus nidulans FGSC A4]
Length = 326
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I+ E+G+V +KL+GAC +C SST T+ GIE +L + +
Sbjct: 223 ELLETRIRPAIQEDGGDIEFRGFENGIVMLKLRGACRTCDSSTVTLRNGIESMLMH-YIE 281
Query: 143 AIKDIRQVYDEEVRETTVEVSALLLCLISDK 173
++ + QV DEE E+S L +K
Sbjct: 282 EVQGVEQVLDEE-----EEISMLEFAKFEEK 307
>gi|282154799|ref|NP_001100076.2| NFU1 iron-sulfur cluster scaffold homolog precursor [Rattus
norvegicus]
gi|149036647|gb|EDL91265.1| histone cell cycle regulation defective interacting protein 5
(predicted), isoform CRA_a [Rattus norvegicus]
Length = 253
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Query: 26 TKFNERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVD 83
TK NE L + +KP +++ S + P AGS ++ A +
Sbjct: 120 TKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPPGEAGSE------EDDEVVAMIKE 173
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDA 143
L+ +RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L + +
Sbjct: 174 LLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNML-QFYIPE 232
Query: 144 IKDIRQVYDEE 154
++ + QV D+E
Sbjct: 233 VEGVEQVMDDE 243
>gi|407917719|gb|EKG11023.1| NIF system FeS cluster assembly NifU [Macrophomina phaseolina MS6]
Length = 385
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 46/72 (63%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I+ +DG+V +KL+GAC +C SST T+ GIE++L
Sbjct: 277 ELLETRIRPAIQDDGGDIEFRGFQDGIVMLKLRGACRTCDSSTVTLKNGIEQMLVHYLSP 336
Query: 143 AIKDIRQVYDEE 154
++ ++ + DEE
Sbjct: 337 DVQGVQHMLDEE 348
>gi|401423674|ref|XP_003876323.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492565|emb|CBZ27842.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 281
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 12/92 (13%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP L ADGGN+ + +++G V + L+GAC SCPSS T+ GIER+L +
Sbjct: 187 ELLATRIRPMLRADGGNVRFIDMDEGTVFLLLEGACKSCPSSHITLKSGIERMLMHWIPE 246
Query: 143 AIKDIRQVYDEEVRETTVEVSALLLCLISDKR 174
+ E +E + EV+A +L S+KR
Sbjct: 247 VV---------EAQEVSDEVAADIL---SEKR 266
>gi|353237443|emb|CCA69416.1| related to NFU-1 protein (iron homeostasis) [Piriformospora indica
DSM 11827]
Length = 261
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ VRP ++ DGG+I+ EDG V VKL+G+C C SST T+ GIE +++ +
Sbjct: 167 ELLETRVRPAIMEDGGDIEYRGFEDGTVKVKLKGSCRGCDSSTVTLKNGIENMMRHYIPE 226
Query: 143 AIKDIRQVYDEE 154
++ + QV D+E
Sbjct: 227 -VQRVEQVLDQE 237
>gi|342181842|emb|CCC91321.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 273
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP L +DGGN+ + ++DG V V L+GAC SCPSS T+ GIER+L +
Sbjct: 179 ELLSTRIRPLLQSDGGNVRYIDMDDGTVFVLLEGACKSCPSSGATLKNGIERMLMHWIPE 238
Query: 143 AIKDIRQVYDE 153
+ ++++ DE
Sbjct: 239 VV-EVQECSDE 248
>gi|317121652|ref|YP_004101655.1| nitrogen-fixing NifU domain-containing protein [Thermaerobacter
marianensis DSM 12885]
gi|315591632|gb|ADU50928.1| nitrogen-fixing NifU domain protein [Thermaerobacter marianensis
DSM 12885]
Length = 73
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 82 VDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
V+ LE +RP + DGG+I++V V E+GVV V+L GAC CP S T+ GIER+L+E+
Sbjct: 5 VEQALESIRPAIQMDGGDIELVDVDENGVVRVRLIGACVGCPMSIMTLKAGIERILRERV 64
>gi|84683414|ref|ZP_01011317.1| nifU domain protein [Maritimibacter alkaliphilus HTCC2654]
gi|84668157|gb|EAQ14624.1| nifU domain protein [Maritimibacter alkaliphilus HTCC2654]
Length = 186
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 36/56 (64%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
DL+ VRP + DGG+I E GVV + +QGAC CPSST T+ MGIE +LK
Sbjct: 118 DLLDTRVRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLKH 173
>gi|339483427|ref|YP_004695213.1| Scaffold protein Nfu/NifU [Nitrosomonas sp. Is79A3]
gi|338805572|gb|AEJ01814.1| Scaffold protein Nfu/NifU [Nitrosomonas sp. Is79A3]
Length = 186
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 74 QFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
Q L NV L+ E+VRPYL DGG++ ++ +E V+ + QGACG+CPSS + GIE
Sbjct: 113 QLRLEKINV-LLDEEVRPYLQHDGGDLHILGLEGNVLRIHYQGACGTCPSSISGTLKGIE 171
Query: 134 RVLK 137
+LK
Sbjct: 172 NMLK 175
>gi|384432499|ref|YP_005641858.1| nitrogen-fixing NifU domain-containing protein [Thermus
thermophilus SG0.5JP17-16]
gi|333967967|gb|AEG34731.1| nitrogen-fixing NifU domain-containing protein [Thermus
thermophilus SG0.5JP17-16]
Length = 285
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 38/54 (70%)
Query: 86 LEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
LE+VRPYL + GG++++V VEDGV V+L GAC C S T+ G+E V+K +
Sbjct: 99 LEEVRPYLRSHGGDVELVKVEDGVAYVRLHGACLGCSLSARTLQDGVEEVIKAR 152
>gi|325954760|ref|YP_004238420.1| nitrogen-fixing NifU domain-containing protein [Weeksella virosa
DSM 16922]
gi|323437378|gb|ADX67842.1| nitrogen-fixing NifU domain-containing protein [Weeksella virosa
DSM 16922]
Length = 93
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 45/65 (69%)
Query: 81 NVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
NV L+++RP+L +DGG+I++V V+D VV V+L+GAC SC + T+ G+E +K+
Sbjct: 8 NVHKALDEIRPFLNSDGGDIELVEVKDNVVKVRLKGACTSCSVNQMTLKAGVETTVKKFV 67
Query: 141 GDAIK 145
+ IK
Sbjct: 68 PEIIK 72
>gi|365959965|ref|YP_004941532.1| hypothetical protein FCOL_04540 [Flavobacterium columnare ATCC
49512]
gi|365736646|gb|AEW85739.1| hypothetical protein FCOL_04540 [Flavobacterium columnare ATCC
49512]
Length = 297
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 78 TAKNVDLVLEDVRPYLIADGGNI--DVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
+ K ++++ E ++P + +DGGNI D + ED V V LQGAC CPSST T+ GIE +
Sbjct: 221 SQKIINIIEEYIKPAVASDGGNILFDSYTEEDKKVKVVLQGACSGCPSSTFTLKNGIENM 280
Query: 136 LKEKFGD 142
LKE D
Sbjct: 281 LKEMLHD 287
>gi|163786509|ref|ZP_02180957.1| thioredoxin-related protein [Flavobacteriales bacterium ALC-1]
gi|159878369|gb|EDP72425.1| thioredoxin-related protein [Flavobacteriales bacterium ALC-1]
Length = 300
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 76 DLTAKNVDLVLED-VRPYLIADGGNIDVVSVEDGV--VSVKLQGACGSCPSSTTTMSMGI 132
D T+KN+ +LE+ ++P + +DGGNI+ S + V V LQGAC CPSST T+ GI
Sbjct: 221 DDTSKNIVNILEEYIKPAVESDGGNIEFKSYDANTKKVEVLLQGACSGCPSSTFTLKNGI 280
Query: 133 ERVLKEKFGD 142
E +LKE D
Sbjct: 281 ENMLKEMLND 290
>gi|218886099|ref|YP_002435420.1| nitrogen-fixing NifU domain-containing protein [Desulfovibrio
vulgaris str. 'Miyazaki F']
gi|218757053|gb|ACL07952.1| nitrogen-fixing NifU domain protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 77
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIER 134
D + V L+ VRPYL DGG++++V + DGVV V+L GAC CP S T+ G+ER
Sbjct: 3 DAIHERVQAALDKVRPYLQGDGGDVELVEITADGVVRVRLTGACKGCPMSQQTLKGGVER 62
Query: 135 -VLKE 138
VLKE
Sbjct: 63 MVLKE 67
>gi|406706902|ref|YP_006757255.1| NifU family protein,scaffold protein, Nfu/NifU family [alpha
proteobacterium HIMB5]
gi|406652678|gb|AFS48078.1| NifU family protein,scaffold protein, Nfu/NifU family [alpha
proteobacterium HIMB5]
Length = 179
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 5/78 (6%)
Query: 74 QFDLTAKNVDLVLED-VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGI 132
F KN+ +L+ +RP + DGG+I +DG+V V+LQG+C CPSST T+ G+
Sbjct: 103 NFSEIEKNIIKILDQKIRPAVAKDGGDIKFKEFKDGIVRVQLQGSCSGCPSSTMTLKQGV 162
Query: 133 ERVLKEKFGDAIKDIRQV 150
+ +LK IK++++V
Sbjct: 163 QNLLKH----YIKEVKEV 176
>gi|397690175|ref|YP_006527429.1| nitrogen-fixing protein NifU [Melioribacter roseus P3M]
gi|395811667|gb|AFN74416.1| putative nitrogen-fixing protein NifU [Melioribacter roseus P3M]
Length = 181
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%)
Query: 62 PAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSC 121
P PG+ S + +L K D++ VRP L DGG +++ +E + ++ QGACGSC
Sbjct: 94 PESELPGVSSEEETELLKKINDVINTRVRPALAGDGGGLEIRGLEGYTLKIRYQGACGSC 153
Query: 122 PSSTTTMSMGIERVLKEKFGDAIK 145
PS+ + IE +LK + AI+
Sbjct: 154 PSAIRGTLIAIENLLKREVNPAIE 177
>gi|385811673|ref|YP_005848069.1| thioredoxin-like protein [Ignavibacterium album JCM 16511]
gi|383803721|gb|AFH50801.1| Thioredoxin-like protein [Ignavibacterium album JCM 16511]
Length = 180
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
+L K DL+ + VRP L DGG ++V+ ++ V ++ QGACGSCPSS + M IE +
Sbjct: 107 ELLKKINDLLDQKVRPALAGDGGGLEVIGLDGFTVKIRYQGACGSCPSSISGTLMAIEGL 166
Query: 136 LKEKFGDAIKDI 147
LK AI+ I
Sbjct: 167 LKRDINPAIQVI 178
>gi|443329071|ref|ZP_21057660.1| Fe-S cluster assembly protein NifU [Xenococcus sp. PCC 7305]
gi|442791220|gb|ELS00718.1| Fe-S cluster assembly protein NifU [Xenococcus sp. PCC 7305]
Length = 298
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 44 LQKSGSHETA--IRASNPSAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNID 101
L+K S E A I ++ AP+ ++ L + + L + +D E++RP L DGG+++
Sbjct: 194 LEKEKSVEVAAAIATASQPAPSPTAKSLTNLQKITLIQRVID---EEIRPILAEDGGDME 250
Query: 102 VVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
+ VE +V V L+GAC C SST T+ + IE LK++
Sbjct: 251 LFDVEGDIVKVVLKGACSGCASSTETLKLAIEATLKDR 288
>gi|424841988|ref|ZP_18266613.1| thioredoxin-like protein [Saprospira grandis DSM 2844]
gi|395320186|gb|EJF53107.1| thioredoxin-like protein [Saprospira grandis DSM 2844]
Length = 207
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 36/49 (73%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
VRP + DGGNI+ + +DG+VSV +QGAC CPSS+ T+ GIE +LK
Sbjct: 145 VRPAVEMDGGNIEFKAYKDGIVSVVMQGACSGCPSSSVTLKTGIEGMLK 193
>gi|376295184|ref|YP_005166414.1| Fe-S cluster assembly protein NifU [Desulfovibrio desulfuricans
ND132]
gi|323457745|gb|EGB13610.1| Fe-S cluster assembly protein NifU [Desulfovibrio desulfuricans
ND132]
Length = 284
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Query: 59 PSA-PAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGA 117
PSA PA + G+ + + L + +D EDVRP L ADGGNI++V ++ V V+ G
Sbjct: 196 PSATPAFPAEGMTNIQRMHLIERVID---EDVRPKLKADGGNIELVDIDRDAVVVRFLGM 252
Query: 118 CGSCPSSTTTMSMGIERVLKEKFGDAIK 145
C CPSS T+ +E L+EK +K
Sbjct: 253 CSGCPSSRATLEGLVETALREKVDPGLK 280
>gi|374289591|ref|YP_005036676.1| hypothetical protein BMS_2953 [Bacteriovorax marinus SJ]
gi|301168132|emb|CBW27720.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
Length = 85
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 40/58 (68%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
+L E VRP L A GGN++V+ +++G + VKL G C C SS+ T+ GIER++K+ F
Sbjct: 7 NLFDEQVRPALAAHGGNVEVIDIDNGKLFVKLSGGCQGCSSSSATLKDGIERMVKQNF 64
>gi|298373186|ref|ZP_06983176.1| Fe-S cluster assembly protein NifU [Bacteroidetes oral taxon 274
str. F0058]
gi|298276090|gb|EFI17641.1| Fe-S cluster assembly protein NifU [Bacteroidetes oral taxon 274
str. F0058]
Length = 93
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 40/64 (62%)
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDA 143
+V E VRP L + GG+I+VV VE V V+L GAC SCPS TM IE L+++ GD
Sbjct: 10 IVAETVRPILRSHGGDIEVVEVEGKNVKVRLLGACSSCPSMQNTMEEIIESTLRQELGDK 69
Query: 144 IKDI 147
I I
Sbjct: 70 IDRI 73
>gi|302409492|ref|XP_003002580.1| HIRA-interacting protein [Verticillium albo-atrum VaMs.102]
gi|261358613|gb|EEY21041.1| HIRA-interacting protein [Verticillium albo-atrum VaMs.102]
Length = 292
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I+ EDGVV +KL+GAC +C SST T+ GIE +L + +
Sbjct: 197 ELLETRIRPAIQEDGGDIEFRGFEDGVVLLKLRGACRTCDSSTVTLKNGIEGMLMH-YIE 255
Query: 143 AIKDIRQVYDEE 154
+K + QV D E
Sbjct: 256 EVKSVNQVMDPE 267
>gi|416394082|ref|ZP_11686093.1| Cysteine desulfurase [Crocosphaera watsonii WH 0003]
gi|357263364|gb|EHJ12383.1| Cysteine desulfurase [Crocosphaera watsonii WH 0003]
Length = 469
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 39/53 (73%)
Query: 87 EDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
E+V+P+L DGG+ID+ +E +V V L+GAC +CPSST T+ + IE LK++
Sbjct: 407 EEVKPFLAQDGGDIDLYDIEGDLVKVVLKGACDACPSSTATLKLAIEARLKDR 459
>gi|116748860|ref|YP_845547.1| NifU domain-containing protein [Syntrophobacter fumaroxidans MPOB]
gi|116697924|gb|ABK17112.1| nitrogen-fixing NifU domain protein [Syntrophobacter fumaroxidans
MPOB]
Length = 72
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 39/59 (66%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
K V+ L +RP L DGG++++V V+ VV V+L GAC CP S T+ GIERV+KE
Sbjct: 3 KKVEEALAKIRPMLERDGGSVELVDVQGTVVKVRLTGACHGCPMSQMTLKAGIERVVKE 61
>gi|379730315|ref|YP_005322511.1| nitrogen-fixing NifU domain-containing protein [Saprospira grandis
str. Lewin]
gi|378575926|gb|AFC24927.1| nitrogen-fixing NifU domain protein [Saprospira grandis str. Lewin]
Length = 207
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 36/49 (73%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
VRP + DGGNI+ + +DG+VSV +QGAC CPSS+ T+ GIE +LK
Sbjct: 145 VRPAVEMDGGNIEFKAYKDGIVSVVMQGACSGCPSSSVTLKTGIEGMLK 193
>gi|254510570|ref|ZP_05122637.1| NifU domain protein [Rhodobacteraceae bacterium KLH11]
gi|221534281|gb|EEE37269.1| NifU domain protein [Rhodobacteraceae bacterium KLH11]
Length = 187
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Query: 29 NERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVDLVL 86
++ +Q+ IKP +V++ S + + A G+ +S ++ + DL+
Sbjct: 66 SDDMQWDHIKPAILGAVMEHYQSGQPVM---GTDADTGAGHAEHSGEDAEIVDQIKDLLD 122
Query: 87 EDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
VRP + DGG+I + G+V + +QGAC CPSST T+ MGIE +L+
Sbjct: 123 SRVRPAVAQDGGDITFHGFDRGIVYLHMQGACAGCPSSTITLKMGIENLLRH 174
>gi|319953626|ref|YP_004164893.1| nitrogen-fixing nifu domain-containing protein [Cellulophaga
algicola DSM 14237]
gi|319422286|gb|ADV49395.1| nitrogen-fixing NifU domain-containing protein [Cellulophaga
algicola DSM 14237]
Length = 300
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 69 LYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSV--EDGVVSVKLQGACGSCPSSTT 126
L A+ D + K +D++ E V+P + +DGGNI S E V+V LQGAC CPSST
Sbjct: 215 LQDANLDDTSKKIIDILEEYVKPAVASDGGNIMFKSYDKETKTVNVILQGACSGCPSSTY 274
Query: 127 TMSMGIERVLKEKFGDAIKDI 147
T+ GIE +LK D ++++
Sbjct: 275 TLKNGIESMLKNMMADHVENV 295
>gi|225711062|gb|ACO11377.1| NFU1 iron-sulfur cluster scaffold homolog [Caligus rogercresseyi]
Length = 237
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
D A +L+ +RP + DGG+I + EDG+V +K+QG+C SCPSS T+ G++ +
Sbjct: 141 DTVAMIKELLDSRIRPTVQEDGGDIIFMGFEDGIVKLKMQGSCTSCPSSIVTLKNGVQNM 200
Query: 136 LKEKFGDAIKDIRQVYDE 153
L+ + I ++ Q++DE
Sbjct: 201 LQFYIPEVI-EVEQIFDE 217
>gi|67922888|ref|ZP_00516385.1| Aminotransferase, class V:Nitrogen-fixing NifU, C-terminal
[Crocosphaera watsonii WH 8501]
gi|67855238|gb|EAM50500.1| Aminotransferase, class V:Nitrogen-fixing NifU, C-terminal
[Crocosphaera watsonii WH 8501]
Length = 469
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 39/53 (73%)
Query: 87 EDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
E+V+P+L DGG+ID+ +E +V V L+GAC +CPSST T+ + IE LK++
Sbjct: 407 EEVKPFLAQDGGDIDLYDIEGDLVKVVLKGACDACPSSTATLKLAIEARLKDR 459
>gi|409401437|ref|ZP_11251222.1| nitrogen fixing thioredoxin-like protein NifU [Acidocella sp.
MX-AZ02]
gi|409129788|gb|EKM99611.1| nitrogen fixing thioredoxin-like protein NifU [Acidocella sp.
MX-AZ02]
Length = 184
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 34/50 (68%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+RP + DGG+I DGVVS+K+QGAC CPSST T+ GIE +LK
Sbjct: 123 IRPAVAGDGGDIIFRGYRDGVVSLKMQGACAGCPSSTATLKHGIENMLKH 172
>gi|110596893|ref|ZP_01385183.1| Nitrogen-fixing NifU-like [Chlorobium ferrooxidans DSM 13031]
gi|110341580|gb|EAT60040.1| Nitrogen-fixing NifU-like [Chlorobium ferrooxidans DSM 13031]
Length = 86
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 86 LEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
LE VRPYL DGG+ +V + +D VV VKL GACGSCP ST T+ G+E+ +K+
Sbjct: 22 LETVRPYLQVDGGDCQLVGISKDMVVDVKLLGACGSCPMSTLTLRAGVEQAIKK 75
>gi|85374519|ref|YP_458581.1| hypothetical protein ELI_08460 [Erythrobacter litoralis HTCC2594]
gi|84787602|gb|ABC63784.1| hypothetical protein ELI_08460 [Erythrobacter litoralis HTCC2594]
Length = 192
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 42/67 (62%)
Query: 71 SAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSM 130
+A D+ A+ +L+ VRP + DGG+I +DGVV + LQGAC CPSST T+
Sbjct: 114 NADDADIVAQINELLETRVRPAVAGDGGDIAYRGFKDGVVYLTLQGACSGCPSSTATLKQ 173
Query: 131 GIERVLK 137
GIE +LK
Sbjct: 174 GIEGLLK 180
>gi|21674600|ref|NP_662665.1| NifU protein [Chlorobium tepidum TLS]
gi|21647799|gb|AAM73007.1| nifU protein, putative [Chlorobium tepidum TLS]
Length = 83
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 86 LEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
LE VRPYL DGG+ +V + +D VV VKL GACGSCP ST T+ G+E+ +K+
Sbjct: 19 LETVRPYLQVDGGDCQLVGITKDMVVDVKLLGACGSCPMSTLTLRAGVEQAIKK 72
>gi|376296445|ref|YP_005167675.1| nitrogen-fixing NifU domain-containing protein [Desulfovibrio
desulfuricans ND132]
gi|323459006|gb|EGB14871.1| nitrogen-fixing NifU domain protein [Desulfovibrio desulfuricans
ND132]
Length = 73
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVED-GVVSVKLQGACGSCPSSTTTMSMGIER-VLK 137
K V+ VL+ VRP L DGG++++V V D G+V V+L GAC CP S T+ GIER +LK
Sbjct: 3 KKVEAVLDKVRPMLQGDGGDVELVEVTDNGIVKVRLTGACKGCPMSQMTLKNGIERIILK 62
Query: 138 E 138
E
Sbjct: 63 E 63
>gi|427416493|ref|ZP_18906676.1| Modular FeS cluster scaffolding protein NifU [Leptolyngbya sp. PCC
7375]
gi|425759206|gb|EKV00059.1| Modular FeS cluster scaffolding protein NifU [Leptolyngbya sp. PCC
7375]
Length = 290
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 38/53 (71%)
Query: 87 EDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
EDVRP LIADGG++++ V VV V+L+GACGSC SST T+ IE L+ +
Sbjct: 228 EDVRPMLIADGGDVELYDVSGDVVQVQLKGACGSCDSSTATLKGAIETRLQSQ 280
>gi|347731759|ref|ZP_08864846.1| nifU-like domain protein [Desulfovibrio sp. A2]
gi|347519434|gb|EGY26592.1| nifU-like domain protein [Desulfovibrio sp. A2]
Length = 77
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIER 134
D + V L+ VRPYL DGG++++V + DGVV V+L GAC CP S T+ G+ER
Sbjct: 3 DAIREKVQAALDKVRPYLQGDGGDVELVDITADGVVRVRLTGACKGCPMSQQTLKGGVER 62
Query: 135 -VLKE 138
VLKE
Sbjct: 63 MVLKE 67
>gi|313144195|ref|ZP_07806388.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
gi|386761642|ref|YP_006235277.1| nitrogen-fixing NifU-like protein [Helicobacter cinaedi PAGU611]
gi|313129226|gb|EFR46843.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
gi|385146658|dbj|BAM12166.1| nitrogen-fixing NifU-like protein [Helicobacter cinaedi PAGU611]
gi|396078924|dbj|BAM32300.1| nitrogen-fixing NifU-like protein [Helicobacter cinaedi ATCC
BAA-847]
Length = 86
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 39/59 (66%)
Query: 82 VDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
V+LV++ VRP L DGG+I ++ + D V V+L+GAC CPSS T+ IE LKE+
Sbjct: 13 VELVIDKVRPTLTLDGGDITLLGIRDAKVYVRLEGACKGCPSSANTLKYAIENRLKEEI 71
>gi|255030011|ref|ZP_05301962.1| hypothetical protein LmonL_14764 [Listeria monocytogenes LO28]
Length = 61
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 91 PYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIRQ 149
P+L+ DGG+ +++ V +DG+V +KL GAC +CPSS T+ MGIE L EK K++ Q
Sbjct: 1 PFLVRDGGDYELIEVTQDGIVKIKLLGACETCPSSDMTLKMGIELTLAEKI-IGFKEVVQ 59
Query: 150 VY 151
V+
Sbjct: 60 VF 61
>gi|225710000|gb|ACO10846.1| NFU1 iron-sulfur cluster scaffold homolog [Caligus rogercresseyi]
Length = 237
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
D A +L+ +RP + DGG+I + EDG+V +K+QG+C SCPSS T+ G++ +
Sbjct: 141 DTVAMIKELLDSRIRPTVQEDGGDIIFMGFEDGIVKLKMQGSCTSCPSSIVTLKNGVQNM 200
Query: 136 LKEKFGDAIKDIRQVYDE 153
L+ + I ++ Q++DE
Sbjct: 201 LQFYIPEVI-EVEQIFDE 217
>gi|195059008|ref|XP_001995543.1| GH17809 [Drosophila grimshawi]
gi|263505270|sp|B4JWR9.1|NFU1_DROGR RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|193896329|gb|EDV95195.1| GH17809 [Drosophila grimshawi]
Length = 298
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
+RP + DGG+I +S E GVV +K+QG+C SCPSS T+ G++ +L + + ++ +
Sbjct: 202 IRPTVQEDGGDIVFISYEKGVVKLKMQGSCSSCPSSIVTLKNGVQNML-QFYIPEVESVE 260
Query: 149 QVYDE 153
QV+DE
Sbjct: 261 QVFDE 265
>gi|302389972|ref|YP_003825793.1| nitrogen-fixing NifU domain-containing protein
[Thermosediminibacter oceani DSM 16646]
gi|302200600|gb|ADL08170.1| nitrogen-fixing NifU domain protein [Thermosediminibacter oceani
DSM 16646]
Length = 74
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 49/73 (67%), Gaps = 3/73 (4%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV--EDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
+ V VL +RP L ADGG++++V V E G+V V+L G+C CP ST T+ GIE+VLK
Sbjct: 3 EKVQEVLNKIRPSLQADGGDVELVDVDEEKGIVKVRLTGSCFGCPFSTLTLKNGIEQVLK 62
Query: 138 EKFGDAIKDIRQV 150
E+ +K+++ V
Sbjct: 63 EEV-PGVKEVQSV 74
>gi|255264504|ref|ZP_05343846.1| NifU domain protein [Thalassiobium sp. R2A62]
gi|255106839|gb|EET49513.1| NifU domain protein [Thalassiobium sp. R2A62]
Length = 187
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Query: 29 NERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVDLVL 86
+ +++ IKP +V++ S I P++ + ++ ++ + +L+
Sbjct: 66 GDDIEWDHIKPAILGAVMEHYQSGAAVIDGEAPTSGGHAE---HTGEDAEIVGQIKELLD 122
Query: 87 EDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
VRP + DGG+I + + GVV + +QGAC CPSST T+ MGIE +L+
Sbjct: 123 TRVRPAVAQDGGDITFLGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRH 174
>gi|114769272|ref|ZP_01446898.1| nifU domain protein [Rhodobacterales bacterium HTCC2255]
gi|114550189|gb|EAU53070.1| nifU domain protein [Rhodobacterales bacterium HTCC2255]
Length = 186
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%)
Query: 70 YSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMS 129
++ D+ + DL+ VRP + DGG+I E G+V + +QGAC CPSST T+
Sbjct: 105 HTGEDSDIVNQIKDLLDTRVRPAVAQDGGDITFHGFERGIVYLHMQGACAGCPSSTITLK 164
Query: 130 MGIERVLKE 138
MGIE +L+
Sbjct: 165 MGIENLLRH 173
>gi|193212089|ref|YP_001998042.1| nitrogen-fixing NifU domain-containing protein [Chlorobaculum
parvum NCIB 8327]
gi|193085566|gb|ACF10842.1| nitrogen-fixing NifU domain protein [Chlorobaculum parvum NCIB
8327]
Length = 83
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 45/66 (68%), Gaps = 5/66 (7%)
Query: 86 LEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
LE VRPYL DGG+ ++ + +D VV VKL GACGSCP ST T+ G+E+ +K+ AI
Sbjct: 19 LETVRPYLQVDGGDCQLIGITKDMVVDVKLLGACGSCPMSTLTLRAGVEQAIKK----AI 74
Query: 145 KDIRQV 150
+I +V
Sbjct: 75 PEIARV 80
>gi|171689560|ref|XP_001909720.1| hypothetical protein [Podospora anserina S mat+]
gi|170944742|emb|CAP70853.1| unnamed protein product [Podospora anserina S mat+]
Length = 323
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I+ E+G+V +KL+GAC +C SST T+ GIE +L + +
Sbjct: 217 ELLETRIRPAIQEDGGDIEFRGFENGIVMLKLRGACRTCDSSTVTLKNGIEGMLMH-YIE 275
Query: 143 AIKDIRQVYDEE 154
++ + QV DEE
Sbjct: 276 EVQGVEQVLDEE 287
>gi|420397928|ref|ZP_14897141.1| hypothetical protein HPCPY1962_0091 [Helicobacter pylori CPY1962]
gi|393014602|gb|EJB15773.1| hypothetical protein HPCPY1962_0091 [Helicobacter pylori CPY1962]
Length = 89
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 40/58 (68%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
K V +V+E +RPYL+ DGGNI+V+ V+ + V L+GAC +C SS T+ IER LK
Sbjct: 11 KPVRIVIEKIRPYLLKDGGNIEVLGVKSMKIYVALEGACKTCSSSKITLKNVIERQLK 68
>gi|385230773|ref|YP_005790689.1| putative nifU-like protein [Helicobacter pylori Puno135]
gi|344337211|gb|AEN19172.1| putative nifU-like protein [Helicobacter pylori Puno135]
Length = 89
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 40/58 (68%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
K V +V+E +RPYL+ DGGNI+V+ V+ + V L+GAC +C SS T+ IER LK
Sbjct: 11 KPVRIVIEKIRPYLLKDGGNIEVLGVKSMKIYVALEGACKTCSSSKITLKNVIERQLK 68
>gi|384888338|ref|YP_005762849.1| NifU-like protein [Helicobacter pylori 52]
gi|385227657|ref|YP_005787581.1| NifU [Helicobacter pylori SNT49]
gi|385249902|ref|YP_005778121.1| NifU [Helicobacter pylori F57]
gi|387908682|ref|YP_006339016.1| NifU-like protein [Helicobacter pylori XZ274]
gi|420396076|ref|ZP_14895298.1| hypothetical protein HPCPY1124_1589 [Helicobacter pylori CPY1124]
gi|420402949|ref|ZP_14902135.1| hypothetical protein HPCPY6261_0096 [Helicobacter pylori CPY6261]
gi|420405816|ref|ZP_14904989.1| hypothetical protein HPCPY6271_1333 [Helicobacter pylori CPY6271]
gi|420437893|ref|ZP_14936873.1| hypothetical protein HPHPH28_1618 [Helicobacter pylori Hp H-28]
gi|421709282|ref|ZP_16148642.1| nifU-like domain protein [Helicobacter pylori R018c]
gi|421712609|ref|ZP_16151941.1| nifU-like domain protein [Helicobacter pylori R32b]
gi|421715784|ref|ZP_16155098.1| nifU-like domain protein [Helicobacter pylori R036d]
gi|421722538|ref|ZP_16161797.1| nifU-like domain protein [Helicobacter pylori R056a]
gi|444374797|ref|ZP_21174100.1| NifU-like protein [Helicobacter pylori A45]
gi|261840168|gb|ACX99933.1| NifU-like protein [Helicobacter pylori 52]
gi|317182697|dbj|BAJ60481.1| conserved hypothetical nifU-like protein [Helicobacter pylori F57]
gi|344332570|gb|AEN17600.1| conserved hypothetical nifU-like protein [Helicobacter pylori
SNT49]
gi|387573617|gb|AFJ82325.1| conserved hypothetical NifU-like protein [Helicobacter pylori
XZ274]
gi|393011055|gb|EJB12244.1| hypothetical protein HPCPY1124_1589 [Helicobacter pylori CPY1124]
gi|393020115|gb|EJB21254.1| hypothetical protein HPCPY6261_0096 [Helicobacter pylori CPY6261]
gi|393021635|gb|EJB22765.1| hypothetical protein HPCPY6271_1333 [Helicobacter pylori CPY6271]
gi|393050820|gb|EJB51774.1| hypothetical protein HPHPH28_1618 [Helicobacter pylori Hp H-28]
gi|407211839|gb|EKE81704.1| nifU-like domain protein [Helicobacter pylori R018c]
gi|407214292|gb|EKE84141.1| nifU-like domain protein [Helicobacter pylori R036d]
gi|407217410|gb|EKE87243.1| nifU-like domain protein [Helicobacter pylori R32b]
gi|407226322|gb|EKE96088.1| nifU-like domain protein [Helicobacter pylori R056a]
gi|443620656|gb|ELT81099.1| NifU-like protein [Helicobacter pylori A45]
Length = 89
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 40/58 (68%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
K V +V+E +RPYL+ DGGNI+V+ V+ + V L+GAC +C SS T+ IER LK
Sbjct: 11 KPVRIVIEKIRPYLLKDGGNIEVLGVKSMKIYVALEGACKTCSSSKITLKNVIERQLK 68
>gi|188528263|ref|YP_001910950.1| hypothetical protein HPSH_07645 [Helicobacter pylori Shi470]
gi|308183595|ref|YP_003927722.1| hypothetical protein HPPC_07320 [Helicobacter pylori PeCan4]
gi|384890087|ref|YP_005764389.1| hypothetical protein HPV225_1523 [Helicobacter pylori v225d]
gi|384893459|ref|YP_005767552.1| NifU [Helicobacter pylori Cuz20]
gi|384894998|ref|YP_005769047.1| NifU [Helicobacter pylori Sat464]
gi|385216646|ref|YP_005776603.1| NifU [Helicobacter pylori F32]
gi|385229159|ref|YP_005789092.1| NifU [Helicobacter pylori Puno120]
gi|386751846|ref|YP_006225066.1| NifU [Helicobacter pylori Shi417]
gi|386753401|ref|YP_006226620.1| NifU [Helicobacter pylori Shi169]
gi|386754967|ref|YP_006228185.1| NifU [Helicobacter pylori Shi112]
gi|188144503|gb|ACD48920.1| conserved hypothetical nifU-like protein [Helicobacter pylori
Shi470]
gi|297380653|gb|ADI35540.1| Hypothetical protein HPV225_1523 [Helicobacter pylori v225d]
gi|308062756|gb|ADO04644.1| conserved hypothetical nifU-like protein [Helicobacter pylori
Cuz20]
gi|308064252|gb|ADO06139.1| conserved hypothetical nifU-like protein [Helicobacter pylori
Sat464]
gi|308065780|gb|ADO07672.1| conserved hypothetical nifU-like protein [Helicobacter pylori
PeCan4]
gi|317181175|dbj|BAJ58961.1| conserved hypothetical nifU-like protein [Helicobacter pylori F32]
gi|344335597|gb|AEN16041.1| conserved hypothetical nifU-like protein [Helicobacter pylori
Puno120]
gi|384558104|gb|AFH98572.1| conserved hypothetical nifU-like protein [Helicobacter pylori
Shi417]
gi|384559659|gb|AFI00127.1| conserved hypothetical nifU-like protein [Helicobacter pylori
Shi169]
gi|384561225|gb|AFI01692.1| conserved hypothetical nifU-like protein [Helicobacter pylori
Shi112]
Length = 89
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 40/58 (68%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
K V +V+E +RPYL+ DGGNI+V+ V+ + V L+GAC +C SS T+ IER LK
Sbjct: 11 KPVRIVIEKIRPYLLKDGGNIEVLGVKSMKIYVALEGACKTCSSSKITLKNVIERQLK 68
>gi|395803517|ref|ZP_10482763.1| NifU domain-containing protein [Flavobacterium sp. F52]
gi|395434329|gb|EJG00277.1| NifU domain-containing protein [Flavobacterium sp. F52]
Length = 299
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 74 QFDLTAKNVDLVLED-VRPYLIADGGNIDVVSV--EDGVVSVKLQGACGSCPSSTTTMSM 130
+ D+T++ + +LE+ V+P + ADGGNI S +D V V LQGAC CPSST T+
Sbjct: 218 KLDVTSQQIINILEEYVKPAVAADGGNIAFESYNEDDKTVKVLLQGACSGCPSSTFTLKS 277
Query: 131 GIERVLKEKFGD-AIK 145
GIE +LK D AIK
Sbjct: 278 GIENMLKSMLNDEAIK 293
>gi|284162204|ref|YP_003400827.1| nitrogen-fixing NifU domain-containing protein [Archaeoglobus
profundus DSM 5631]
gi|284012201|gb|ADB58154.1| nitrogen-fixing NifU domain protein [Archaeoglobus profundus DSM
5631]
Length = 77
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVED--GVVSVKLQGACGSCPSSTTTMSMGI 132
L K ++V +++RPYL+ADGGNI VV V++ G+V VKL GAC CP + T++ +
Sbjct: 1 MSLREKVEEVVNKEIRPYLMADGGNIAVVDVDEKEGIVKVKLMGACYGCPMAQITLTAFV 60
Query: 133 ERVLKEKFGDAIKDI 147
E+ LK + + K I
Sbjct: 61 EQHLKSRIPEVKKVI 75
>gi|325982994|ref|YP_004295396.1| Scaffold protein Nfu/NifU [Nitrosomonas sp. AL212]
gi|325532513|gb|ADZ27234.1| Scaffold protein Nfu/NifU [Nitrosomonas sp. AL212]
Length = 186
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 74 QFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIE 133
Q L N+ L+ E+VRPYL +DGG++ ++ +E ++ + QGACG+CPSS + GIE
Sbjct: 113 QLRLEKINI-LLDEEVRPYLQSDGGDLHILGLEGNILHIHYQGACGTCPSSISGTLRGIE 171
Query: 134 RVLK 137
+L+
Sbjct: 172 NMLR 175
>gi|225011341|ref|ZP_03701795.1| nitrogen-fixing NifU domain protein [Flavobacteria bacterium
MS024-3C]
gi|225004524|gb|EEG42492.1| nitrogen-fixing NifU domain protein [Flavobacteria bacterium
MS024-3C]
Length = 301
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 69 LYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVED--GVVSVKLQGACGSCPSSTT 126
L++ + D + + VD++ E V+P + +DGGNI S ++ V+V LQGAC CPSST
Sbjct: 216 LHTDNLDDTSKQIVDILEEYVKPAVASDGGNIMFDSYDEVSKTVNVILQGACSGCPSSTF 275
Query: 127 TMSMGIERVLKEKFGDAIKDI 147
T+ GIE +LK GD + +
Sbjct: 276 TLKNGIENMLKNMMGDKVAQV 296
>gi|429750067|ref|ZP_19283132.1| NifU-like protein [Capnocytophaga sp. oral taxon 332 str. F0381]
gi|429165994|gb|EKY08010.1| NifU-like protein [Capnocytophaga sp. oral taxon 332 str. F0381]
Length = 299
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 82 VDLVLEDVRPYLIADGGNIDVVS--VEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
V ++ E VRP + +DGGNI +S E V+V LQGAC CPSS T+ GIE +LK+K
Sbjct: 229 VAILDEYVRPAVASDGGNIQFISYCAETHHVAVLLQGACSGCPSSVQTLKKGIEVILKDK 288
Query: 140 FGD 142
G+
Sbjct: 289 LGN 291
>gi|223934715|ref|ZP_03626635.1| nitrogen-fixing NifU domain protein [bacterium Ellin514]
gi|223896670|gb|EEF63111.1| nitrogen-fixing NifU domain protein [bacterium Ellin514]
Length = 305
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 68/144 (47%), Gaps = 31/144 (21%)
Query: 69 LYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTM 128
++ H +L A+ ++ L+ VRPY+ + GGN++++S+ + ++LQG C SCPSS T+
Sbjct: 106 IHGLHPVNLEARLLE-ALDKVRPYMESHGGNVELISLVNDKACLRLQGTCKSCPSSAITL 164
Query: 129 SMGIERVLKEKFGDAI------------------------------KDIRQVYDEEVRET 158
+ + ++E D I +D+ Q+ ++ +R
Sbjct: 165 ELAVRHAIEEACPDLIGFEVEGAVEPTTLDQTSSDAKFQPASWTLLEDLAQLNNDNLRVI 224
Query: 159 TVEVSALLLCLISDKRYYYTTAVP 182
+ +LL+C +++ Y Y P
Sbjct: 225 ETKGISLLICKVNENLYAYRNLCP 248
>gi|420434767|ref|ZP_14933767.1| hypothetical protein HPHPH27_0094 [Helicobacter pylori Hp H-27]
gi|393052535|gb|EJB53481.1| hypothetical protein HPHPH27_0094 [Helicobacter pylori Hp H-27]
Length = 89
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 40/58 (68%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
K V +V+E +RPYL+ DGGNI+V+ V+ + V L+GAC +C SS T+ IER LK
Sbjct: 11 KPVRIVIEKIRPYLLKDGGNIEVLGVKSMKIYVALEGACKTCSSSKITLKNVIERQLK 68
>gi|395509269|ref|XP_003758923.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Sarcophilus harrisii]
Length = 253
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
+RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L + + ++ +
Sbjct: 180 IRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNML-QFYIPEVEGVE 238
Query: 149 QVYDEEVRE 157
QV D+E+ E
Sbjct: 239 QVVDDELEE 247
>gi|344202301|ref|YP_004787444.1| nitrogen-fixing NifU domain-containing protein [Muricauda
ruestringensis DSM 13258]
gi|343954223|gb|AEM70022.1| nitrogen-fixing NifU domain-containing protein [Muricauda
ruestringensis DSM 13258]
Length = 81
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 78 TAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
T NV+ LE++RP+L +DGG+I ++S+ED V V+L+G C C + T+ G+E +K
Sbjct: 9 TRSNVEKALEEIRPFLQSDGGDITLISIEDNTVKVRLEGNCIGCTVNQMTLKSGVEMTIK 68
Query: 138 EKFGDAIKDI 147
K+ I+++
Sbjct: 69 -KYAPQIEEV 77
>gi|194337374|ref|YP_002019168.1| nitrogen-fixing NifU domain-containing protein [Pelodictyon
phaeoclathratiforme BU-1]
gi|194309851|gb|ACF44551.1| nitrogen-fixing NifU domain protein [Pelodictyon
phaeoclathratiforme BU-1]
Length = 86
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 86 LEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
LE VRPYL DGG+ +V + +D V VKL GACGSCP ST T+ G+E+ +K+ + +
Sbjct: 22 LETVRPYLQVDGGDCQIVGITKDMTVDVKLLGACGSCPMSTLTLRAGVEQAIKKAVPEIV 81
Query: 145 K 145
+
Sbjct: 82 R 82
>gi|427739702|ref|YP_007059246.1| Modular FeS cluster scaffolding protein NifU [Rivularia sp. PCC
7116]
gi|427374743|gb|AFY58699.1| Modular FeS cluster scaffolding protein NifU [Rivularia sp. PCC
7116]
Length = 301
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 39/58 (67%)
Query: 87 EDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
E++RP LIADGG++++ VE + V L+GACGSC SS T+ IE LKE+ + I
Sbjct: 237 EEIRPILIADGGDVELYDVESDTIRVILKGACGSCSSSLATLKNAIEAKLKERISNNI 294
>gi|260753996|ref|YP_003226889.1| Scaffold protein Nfu/NifU [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|384412591|ref|YP_005621956.1| Scaffold protein Nfu/NifU [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|258553359|gb|ACV76305.1| Scaffold protein Nfu/NifU [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|335932965|gb|AEH63505.1| Scaffold protein Nfu/NifU [Zymomonas mobilis subsp. mobilis ATCC
10988]
Length = 183
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
DL+ VRP + DGG+I EDG+V + ++GAC CPSS T+ G+E +LK F
Sbjct: 117 DLIDSRVRPAVARDGGDIVFQKFEDGIVYLSMRGACAGCPSSVATLKQGVETLLKH-FVP 175
Query: 143 AIKDIRQV 150
IK++R +
Sbjct: 176 EIKEVRAI 183
>gi|91089707|ref|XP_974909.1| PREDICTED: similar to AGAP000598-PA [Tribolium castaneum]
gi|270011317|gb|EFA07765.1| hypothetical protein TcasGA2_TC005319 [Tribolium castaneum]
Length = 244
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
+RP + DGG+I + +DG+V +KLQGAC SCPSS T+ G++ +L+ + + +
Sbjct: 173 IRPTVQEDGGDIIFMGYDDGIVKLKLQGACTSCPSSIVTLKNGVQNMLQFYIPEVL-GVE 231
Query: 149 QVYDEEV 155
QV DEE+
Sbjct: 232 QVQDEEL 238
>gi|15612450|ref|NP_224103.1| NifU-like protein [Helicobacter pylori J99]
gi|15646101|ref|NP_208283.1| NifU-like protein [Helicobacter pylori 26695]
gi|207092454|ref|ZP_03240241.1| NifU-like protein [Helicobacter pylori HPKX_438_AG0C1]
gi|208435360|ref|YP_002267026.1| nifU-like protein [Helicobacter pylori G27]
gi|210135659|ref|YP_002302098.1| nifu-like protein [Helicobacter pylori P12]
gi|217031837|ref|ZP_03437340.1| hypothetical protein HPB128_199g45 [Helicobacter pylori B128]
gi|254780002|ref|YP_003058109.1| nifU-like protein [Helicobacter pylori B38]
gi|298735538|ref|YP_003728059.1| thioredoxin-like protein [Helicobacter pylori B8]
gi|308185262|ref|YP_003929395.1| putative nifU-like protein [Helicobacter pylori SJM180]
gi|383750522|ref|YP_005425625.1| putative nifU-like protein [Helicobacter pylori ELS37]
gi|384891839|ref|YP_005765972.1| NifU-like protein [Helicobacter pylori 908]
gi|384898157|ref|YP_005773585.1| putative nifU-like protein [Helicobacter pylori Lithuania75]
gi|385219749|ref|YP_005781224.1| putative nifU-like protein [Helicobacter pylori Gambia94/24]
gi|385221327|ref|YP_005782799.1| putative nifU-like protein [Helicobacter pylori India7]
gi|385222848|ref|YP_005771981.1| putative nifU-like protein [Helicobacter pylori SouthAfrica7]
gi|385224520|ref|YP_005784446.1| NifU-like protein [Helicobacter pylori 2017]
gi|385232370|ref|YP_005792289.1| NifU-like protein [Helicobacter pylori 2018]
gi|386746909|ref|YP_006220126.1| putative nifU-like protein [Helicobacter pylori HUP-B14]
gi|386756427|ref|YP_006229644.1| putative nifU-like protein [Helicobacter pylori PeCan18]
gi|410024733|ref|YP_006893986.1| putative nifU-like protein [Helicobacter pylori Rif1]
gi|410502497|ref|YP_006937024.1| putative nifU-like protein [Helicobacter pylori Rif2]
gi|410683016|ref|YP_006935418.1| putative nifU-like protein [Helicobacter pylori 26695]
gi|419417207|ref|ZP_13957681.1| putative nifU-like protein [Helicobacter pylori P79]
gi|419419178|ref|ZP_13959439.1| putative nifU-like protein [Helicobacter pylori NCTC 11637 = CCUG
17874]
gi|420407869|ref|ZP_14907028.1| hypothetical protein HPNQ4216_0060 [Helicobacter pylori NQ4216]
gi|420410880|ref|ZP_14910016.1| hypothetical protein HPNQ4200_1431 [Helicobacter pylori NQ4200]
gi|420414348|ref|ZP_14913468.1| hypothetical protein HPNQ4099_1617 [Helicobacter pylori NQ4099]
gi|420415918|ref|ZP_14915031.1| hypothetical protein HPNQ4053_1532 [Helicobacter pylori NQ4053]
gi|420417826|ref|ZP_14916921.1| hypothetical protein HPNQ4044_1760 [Helicobacter pylori NQ4044]
gi|420419453|ref|ZP_14918543.1| hypothetical protein HPNQ4076_1616 [Helicobacter pylori NQ4076]
gi|420421174|ref|ZP_14920256.1| hypothetical protein HPNQ4161_1704 [Helicobacter pylori NQ4161]
gi|420421262|ref|ZP_14920340.1| hypothetical protein HPNQ4110_0058 [Helicobacter pylori NQ4110]
gi|420424389|ref|ZP_14923457.1| hypothetical protein HPHPA4_1632 [Helicobacter pylori Hp A-4]
gi|420425941|ref|ZP_14925001.1| hypothetical protein HPHPA5_1483 [Helicobacter pylori Hp A-5]
gi|420427818|ref|ZP_14926859.1| hypothetical protein HPHPA9_1694 [Helicobacter pylori Hp A-9]
gi|420429479|ref|ZP_14928512.1| hypothetical protein HPHPA17_1588 [Helicobacter pylori Hp A-17]
gi|420431227|ref|ZP_14930248.1| hypothetical protein HPHPA20_1693 [Helicobacter pylori Hp A-20]
gi|420432865|ref|ZP_14931878.1| hypothetical protein HPHPH16_1614 [Helicobacter pylori Hp H-16]
gi|420433037|ref|ZP_14932046.1| hypothetical protein HPHPH24_0055 [Helicobacter pylori Hp H-24]
gi|420439515|ref|ZP_14938478.1| hypothetical protein HPHPH29_1598 [Helicobacter pylori Hp H-29]
gi|420441168|ref|ZP_14940118.1| hypothetical protein HPHPH30_1608 [Helicobacter pylori Hp H-30]
gi|420442834|ref|ZP_14941765.1| hypothetical protein HPHPH36_1634 [Helicobacter pylori Hp H-36]
gi|420444515|ref|ZP_14943436.1| hypothetical protein HPHPH41_1621 [Helicobacter pylori Hp H-41]
gi|420446218|ref|ZP_14945119.1| hypothetical protein HPHPH42_1644 [Helicobacter pylori Hp H-42]
gi|420447780|ref|ZP_14946666.1| hypothetical protein HPHPH43_1479 [Helicobacter pylori Hp H-43]
gi|420449557|ref|ZP_14948426.1| hypothetical protein HPHPH44_1653 [Helicobacter pylori Hp H-44]
gi|420451035|ref|ZP_14949889.1| hypothetical protein HPHPH45_1453 [Helicobacter pylori Hp H-45]
gi|420452868|ref|ZP_14951709.1| hypothetical protein HPHPA6_1633 [Helicobacter pylori Hp A-6]
gi|420454419|ref|ZP_14953252.1| hypothetical protein HPHPA8_1519 [Helicobacter pylori Hp A-8]
gi|420455985|ref|ZP_14954809.1| hypothetical protein HPHPA14_1444 [Helicobacter pylori Hp A-14]
gi|420457805|ref|ZP_14956617.1| hypothetical protein HPHPA16_1672 [Helicobacter pylori Hp A-16]
gi|420459278|ref|ZP_14958080.1| hypothetical protein HPHPA26_1469 [Helicobacter pylori Hp A-26]
gi|420462795|ref|ZP_14961576.1| hypothetical protein HPHPH3_1639 [Helicobacter pylori Hp H-3]
gi|420464509|ref|ZP_14963280.1| hypothetical protein HPHPH4_1662 [Helicobacter pylori Hp H-4]
gi|420466236|ref|ZP_14964996.1| hypothetical protein HPHPH6_1675 [Helicobacter pylori Hp H-6]
gi|420467910|ref|ZP_14966658.1| hypothetical protein HPHPH9_1622 [Helicobacter pylori Hp H-9]
gi|420469611|ref|ZP_14968327.1| hypothetical protein HPHPH10_1658 [Helicobacter pylori Hp H-10]
gi|420469758|ref|ZP_14968469.1| hypothetical protein HPHPH11_0093 [Helicobacter pylori Hp H-11]
gi|420473095|ref|ZP_14971776.1| hypothetical protein HPHPH18_1735 [Helicobacter pylori Hp H-18]
gi|420473282|ref|ZP_14971960.1| hypothetical protein HPHPH19_0101 [Helicobacter pylori Hp H-19]
gi|420476311|ref|ZP_14974978.1| hypothetical protein HPHPH21_1523 [Helicobacter pylori Hp H-21]
gi|420476526|ref|ZP_14975189.1| hypothetical protein HPHPH23_0060 [Helicobacter pylori Hp H-23]
gi|420478291|ref|ZP_14976944.1| hypothetical protein HPHPH34_0162 [Helicobacter pylori Hp H-34]
gi|420479831|ref|ZP_14978475.1| nifU-like domain protein [Helicobacter pylori Hp P-1]
gi|420483057|ref|ZP_14981691.1| nifU-like domain protein [Helicobacter pylori Hp P-2]
gi|420484765|ref|ZP_14983386.1| nifU-like domain protein [Helicobacter pylori Hp P-3]
gi|420484892|ref|ZP_14983510.1| nifU-like domain protein [Helicobacter pylori Hp P-4]
gi|420488079|ref|ZP_14986682.1| hypothetical protein HPHPP8_1578 [Helicobacter pylori Hp P-8]
gi|420489601|ref|ZP_14988193.1| hypothetical protein HPHPP11_1465 [Helicobacter pylori Hp P-11]
gi|420491600|ref|ZP_14990178.1| hypothetical protein HPHPP13_1723 [Helicobacter pylori Hp P-13]
gi|420491802|ref|ZP_14990378.1| hypothetical protein HPHPP15_0097 [Helicobacter pylori Hp P-15]
gi|420494753|ref|ZP_14993320.1| hypothetical protein HPHPP16_1411 [Helicobacter pylori Hp P-16]
gi|420496417|ref|ZP_14994980.1| hypothetical protein HPHPP23_1519 [Helicobacter pylori Hp P-23]
gi|420496734|ref|ZP_14995295.1| nifU-like domain protein [Helicobacter pylori Hp P-25]
gi|420499559|ref|ZP_14998115.1| hypothetical protein HPHPP26_1117 [Helicobacter pylori Hp P-26]
gi|420500293|ref|ZP_14998839.1| hypothetical protein HPHPP30_0096 [Helicobacter pylori Hp P-30]
gi|420503459|ref|ZP_15001993.1| hypothetical protein HPHPP41_1670 [Helicobacter pylori Hp P-41]
gi|420505020|ref|ZP_15003544.1| hypothetical protein HPHPP62_1497 [Helicobacter pylori Hp P-62]
gi|420505304|ref|ZP_15003820.1| hypothetical protein HPHPP74_0097 [Helicobacter pylori Hp P-74]
gi|420508448|ref|ZP_15006954.1| nifU-like domain protein [Helicobacter pylori Hp H-24b]
gi|420510135|ref|ZP_15008631.1| nifU-like domain protein [Helicobacter pylori Hp H-24c]
gi|420510317|ref|ZP_15008807.1| nifU-like domain protein [Helicobacter pylori Hp P-1b]
gi|420513525|ref|ZP_15012003.1| nifU-like domain protein [Helicobacter pylori Hp P-2b]
gi|420515147|ref|ZP_15013614.1| nifU-like domain protein [Helicobacter pylori Hp P-3b]
gi|420515386|ref|ZP_15013849.1| nifU-like domain protein [Helicobacter pylori Hp P-4c]
gi|420517088|ref|ZP_15015543.1| nifU-like domain protein [Helicobacter pylori Hp P-4d]
gi|420520315|ref|ZP_15018750.1| nifU-like domain protein [Helicobacter pylori Hp H-5b]
gi|420521953|ref|ZP_15020382.1| nifU-like domain protein [Helicobacter pylori Hp P-8b]
gi|420523542|ref|ZP_15021960.1| nifU-like domain protein [Helicobacter pylori Hp P-11b]
gi|420525373|ref|ZP_15023778.1| nifU-like domain protein [Helicobacter pylori Hp P-13b]
gi|420525568|ref|ZP_15023971.1| nifU-like domain protein [Helicobacter pylori Hp P-15b]
gi|420528762|ref|ZP_15027152.1| nifU-like domain protein [Helicobacter pylori Hp P-25c]
gi|420528923|ref|ZP_15027311.1| nifU-like domain protein [Helicobacter pylori Hp P-25d]
gi|420531971|ref|ZP_15030342.1| nifU-like domain protein [Helicobacter pylori Hp P-28b]
gi|420532228|ref|ZP_15030591.1| hypothetical protein HPHPM1_0054 [Helicobacter pylori Hp M1]
gi|420535431|ref|ZP_15033776.1| hypothetical protein HPHPM2_1602 [Helicobacter pylori Hp M2]
gi|420535601|ref|ZP_15033943.1| hypothetical protein HPHPM3_0058 [Helicobacter pylori Hp M3]
gi|420537303|ref|ZP_15035633.1| hypothetical protein HPHPM4_0060 [Helicobacter pylori Hp M4]
gi|420539032|ref|ZP_15037351.1| hypothetical protein HPHPM5_0089 [Helicobacter pylori Hp M5]
gi|420540790|ref|ZP_15039098.1| hypothetical protein HPHPM6_0178 [Helicobacter pylori Hp M6]
gi|420543859|ref|ZP_15042148.1| hypothetical protein HPHPM9_1562 [Helicobacter pylori Hp M9]
gi|421712494|ref|ZP_16151828.1| nifU-like domain protein [Helicobacter pylori R030b]
gi|421715934|ref|ZP_16155246.1| nifU-like domain protein [Helicobacter pylori R037c]
gi|421719064|ref|ZP_16158354.1| nifU-like domain protein [Helicobacter pylori R038b]
gi|421720539|ref|ZP_16159819.1| nifU-like domain protein [Helicobacter pylori R046Wa]
gi|421720792|ref|ZP_16160069.1| nifU-like domain protein [Helicobacter pylori R055a]
gi|425432174|ref|ZP_18812747.1| NifU-like protein [Helicobacter pylori GAM100Ai]
gi|2314672|gb|AAD08534.1| conserved hypothetical nifU-like protein [Helicobacter pylori
26695]
gi|4156005|gb|AAD06966.1| putative [Helicobacter pylori J99]
gi|208433289|gb|ACI28160.1| conserved hypothetical nifU-like protein [Helicobacter pylori G27]
gi|210133627|gb|ACJ08618.1| nifu-like protein [Helicobacter pylori P12]
gi|216946489|gb|EEC25091.1| hypothetical protein HPB128_199g45 [Helicobacter pylori B128]
gi|254001915|emb|CAX30168.1| Putative nifU-like protein [Helicobacter pylori B38]
gi|298354723|emb|CBI65595.1| thioredoxin-like protein [Helicobacter pylori B8]
gi|307638148|gb|ADN80598.1| NifU like protein [Helicobacter pylori 908]
gi|308061182|gb|ADO03078.1| putative nifU-like protein [Helicobacter pylori SJM180]
gi|317010134|gb|ADU80714.1| putative nifU-like protein [Helicobacter pylori India7]
gi|317011627|gb|ADU85374.1| putative nifU-like protein [Helicobacter pylori SouthAfrica7]
gi|317013262|gb|ADU83870.1| putative nifU-like protein [Helicobacter pylori Lithuania75]
gi|317014907|gb|ADU82343.1| putative nifU-like protein [Helicobacter pylori Gambia94/24]
gi|325996747|gb|ADZ52152.1| NifU like protein [Helicobacter pylori 2018]
gi|325998342|gb|ADZ50550.1| NifU like protein [Helicobacter pylori 2017]
gi|380875268|gb|AFF21049.1| putative nifU-like protein [Helicobacter pylori ELS37]
gi|384372836|gb|EIE28394.1| putative nifU-like protein [Helicobacter pylori NCTC 11637 = CCUG
17874]
gi|384373561|gb|EIE29038.1| putative nifU-like protein [Helicobacter pylori P79]
gi|384553158|gb|AFI08106.1| putative nifU-like protein [Helicobacter pylori HUP-B14]
gi|384562685|gb|AFI03151.1| putative nifU-like protein [Helicobacter pylori PeCan18]
gi|393025354|gb|EJB26460.1| hypothetical protein HPNQ4216_0060 [Helicobacter pylori NQ4216]
gi|393026093|gb|EJB27193.1| hypothetical protein HPNQ4200_1431 [Helicobacter pylori NQ4200]
gi|393026682|gb|EJB27779.1| hypothetical protein HPNQ4099_1617 [Helicobacter pylori NQ4099]
gi|393031007|gb|EJB32080.1| hypothetical protein HPNQ4044_1760 [Helicobacter pylori NQ4044]
gi|393031359|gb|EJB32431.1| hypothetical protein HPNQ4076_1616 [Helicobacter pylori NQ4076]
gi|393031823|gb|EJB32894.1| hypothetical protein HPNQ4053_1532 [Helicobacter pylori NQ4053]
gi|393035110|gb|EJB36159.1| hypothetical protein HPNQ4161_1704 [Helicobacter pylori NQ4161]
gi|393037780|gb|EJB38814.1| hypothetical protein HPNQ4110_0058 [Helicobacter pylori NQ4110]
gi|393039677|gb|EJB40704.1| hypothetical protein HPHPA4_1632 [Helicobacter pylori Hp A-4]
gi|393040004|gb|EJB41025.1| hypothetical protein HPHPA9_1694 [Helicobacter pylori Hp A-9]
gi|393040839|gb|EJB41857.1| hypothetical protein HPHPA5_1483 [Helicobacter pylori Hp A-5]
gi|393044218|gb|EJB45212.1| hypothetical protein HPHPA20_1693 [Helicobacter pylori Hp A-20]
gi|393044809|gb|EJB45801.1| hypothetical protein HPHPA17_1588 [Helicobacter pylori Hp A-17]
gi|393046955|gb|EJB47934.1| hypothetical protein HPHPH16_1614 [Helicobacter pylori Hp H-16]
gi|393051905|gb|EJB52855.1| hypothetical protein HPHPH24_0055 [Helicobacter pylori Hp H-24]
gi|393053834|gb|EJB54776.1| hypothetical protein HPHPH29_1598 [Helicobacter pylori Hp H-29]
gi|393054309|gb|EJB55238.1| hypothetical protein HPHPH30_1608 [Helicobacter pylori Hp H-30]
gi|393056779|gb|EJB57689.1| hypothetical protein HPHPH36_1634 [Helicobacter pylori Hp H-36]
gi|393058495|gb|EJB59386.1| hypothetical protein HPHPH41_1621 [Helicobacter pylori Hp H-41]
gi|393059407|gb|EJB60287.1| hypothetical protein HPHPH42_1644 [Helicobacter pylori Hp H-42]
gi|393061841|gb|EJB62701.1| hypothetical protein HPHPH43_1479 [Helicobacter pylori Hp H-43]
gi|393062357|gb|EJB63212.1| hypothetical protein HPHPH44_1653 [Helicobacter pylori Hp H-44]
gi|393064967|gb|EJB65797.1| hypothetical protein HPHPH45_1453 [Helicobacter pylori Hp H-45]
gi|393066681|gb|EJB67500.1| hypothetical protein HPHPA6_1633 [Helicobacter pylori Hp A-6]
gi|393067740|gb|EJB68547.1| hypothetical protein HPHPA8_1519 [Helicobacter pylori Hp A-8]
gi|393071105|gb|EJB71892.1| hypothetical protein HPHPA14_1444 [Helicobacter pylori Hp A-14]
gi|393071680|gb|EJB72462.1| hypothetical protein HPHPA16_1672 [Helicobacter pylori Hp A-16]
gi|393071968|gb|EJB72748.1| hypothetical protein HPHPA26_1469 [Helicobacter pylori Hp A-26]
gi|393077738|gb|EJB78485.1| hypothetical protein HPHPH4_1662 [Helicobacter pylori Hp H-4]
gi|393078196|gb|EJB78940.1| hypothetical protein HPHPH3_1639 [Helicobacter pylori Hp H-3]
gi|393078811|gb|EJB79549.1| hypothetical protein HPHPH6_1675 [Helicobacter pylori Hp H-6]
gi|393082030|gb|EJB82747.1| hypothetical protein HPHPH9_1622 [Helicobacter pylori Hp H-9]
gi|393083443|gb|EJB84148.1| hypothetical protein HPHPH10_1658 [Helicobacter pylori Hp H-10]
gi|393086599|gb|EJB87273.1| hypothetical protein HPHPH18_1735 [Helicobacter pylori Hp H-18]
gi|393086804|gb|EJB87474.1| hypothetical protein HPHPH11_0093 [Helicobacter pylori Hp H-11]
gi|393090218|gb|EJB90852.1| hypothetical protein HPHPH21_1523 [Helicobacter pylori Hp H-21]
gi|393090410|gb|EJB91043.1| hypothetical protein HPHPH19_0101 [Helicobacter pylori Hp H-19]
gi|393094951|gb|EJB95556.1| hypothetical protein HPHPH23_0060 [Helicobacter pylori Hp H-23]
gi|393097065|gb|EJB97659.1| hypothetical protein HPHPH34_0162 [Helicobacter pylori Hp H-34]
gi|393097661|gb|EJB98254.1| nifU-like domain protein [Helicobacter pylori Hp P-2]
gi|393097744|gb|EJB98336.1| nifU-like domain protein [Helicobacter pylori Hp P-1]
gi|393098600|gb|EJB99186.1| nifU-like domain protein [Helicobacter pylori Hp P-3]
gi|393101469|gb|EJC02041.1| hypothetical protein HPHPP8_1578 [Helicobacter pylori Hp P-8]
gi|393103027|gb|EJC03590.1| nifU-like domain protein [Helicobacter pylori Hp P-4]
gi|393104813|gb|EJC05367.1| hypothetical protein HPHPP13_1723 [Helicobacter pylori Hp P-13]
gi|393105022|gb|EJC05573.1| hypothetical protein HPHPP11_1465 [Helicobacter pylori Hp P-11]
gi|393108497|gb|EJC09031.1| hypothetical protein HPHPP15_0097 [Helicobacter pylori Hp P-15]
gi|393109908|gb|EJC10436.1| hypothetical protein HPHPP16_1411 [Helicobacter pylori Hp P-16]
gi|393110475|gb|EJC11000.1| hypothetical protein HPHPP23_1519 [Helicobacter pylori Hp P-23]
gi|393114431|gb|EJC14946.1| nifU-like domain protein [Helicobacter pylori Hp P-25]
gi|393115240|gb|EJC15751.1| nifU-like domain protein [Helicobacter pylori Hp H-24b]
gi|393116662|gb|EJC17167.1| nifU-like domain protein [Helicobacter pylori Hp H-24c]
gi|393116836|gb|EJC17340.1| hypothetical protein HPHPP74_0097 [Helicobacter pylori Hp P-74]
gi|393122058|gb|EJC22535.1| nifU-like domain protein [Helicobacter pylori Hp P-1b]
gi|393123685|gb|EJC24153.1| nifU-like domain protein [Helicobacter pylori Hp P-4c]
gi|393124711|gb|EJC25178.1| nifU-like domain protein [Helicobacter pylori Hp H-5b]
gi|393124902|gb|EJC25368.1| nifU-like domain protein [Helicobacter pylori Hp P-4d]
gi|393125891|gb|EJC26343.1| nifU-like domain protein [Helicobacter pylori Hp P-11b]
gi|393126523|gb|EJC26974.1| nifU-like domain protein [Helicobacter pylori Hp P-8b]
gi|393130179|gb|EJC30609.1| nifU-like domain protein [Helicobacter pylori Hp P-13b]
gi|393132361|gb|EJC32782.1| nifU-like domain protein [Helicobacter pylori Hp P-25c]
gi|393133589|gb|EJC34005.1| nifU-like domain protein [Helicobacter pylori Hp P-15b]
gi|393135821|gb|EJC36216.1| nifU-like domain protein [Helicobacter pylori Hp P-28b]
gi|393138037|gb|EJC38419.1| nifU-like domain protein [Helicobacter pylori Hp P-25d]
gi|393139716|gb|EJC40090.1| hypothetical protein HPHPM2_1602 [Helicobacter pylori Hp M2]
gi|393139859|gb|EJC40232.1| hypothetical protein HPHPM1_0054 [Helicobacter pylori Hp M1]
gi|393143249|gb|EJC43593.1| hypothetical protein HPHPM3_0058 [Helicobacter pylori Hp M3]
gi|393144858|gb|EJC45189.1| hypothetical protein HPHPM4_0060 [Helicobacter pylori Hp M4]
gi|393146717|gb|EJC47042.1| hypothetical protein HPHPM5_0089 [Helicobacter pylori Hp M5]
gi|393147410|gb|EJC47734.1| hypothetical protein HPHPM6_0178 [Helicobacter pylori Hp M6]
gi|393149555|gb|EJC49865.1| hypothetical protein HPHPP41_1670 [Helicobacter pylori Hp P-41]
gi|393151761|gb|EJC52064.1| hypothetical protein HPHPP26_1117 [Helicobacter pylori Hp P-26]
gi|393152060|gb|EJC52361.1| hypothetical protein HPHPP30_0096 [Helicobacter pylori Hp P-30]
gi|393154166|gb|EJC54451.1| hypothetical protein HPHPP62_1497 [Helicobacter pylori Hp P-62]
gi|393155590|gb|EJC55862.1| nifU-like domain protein [Helicobacter pylori Hp P-3b]
gi|393155942|gb|EJC56213.1| nifU-like domain protein [Helicobacter pylori Hp P-2b]
gi|393158856|gb|EJC59112.1| hypothetical protein HPHPM9_1562 [Helicobacter pylori Hp M9]
gi|407209767|gb|EKE79655.1| nifU-like domain protein [Helicobacter pylori R030b]
gi|407218541|gb|EKE88365.1| nifU-like domain protein [Helicobacter pylori R038b]
gi|407219131|gb|EKE88948.1| nifU-like domain protein [Helicobacter pylori R046Wa]
gi|407221832|gb|EKE91635.1| nifU-like domain protein [Helicobacter pylori R037c]
gi|407225576|gb|EKE95346.1| nifU-like domain protein [Helicobacter pylori R055a]
gi|409894657|gb|AFV42715.1| putative nifU-like protein [Helicobacter pylori 26695]
gi|409896390|gb|AFV44312.1| putative nifU-like protein [Helicobacter pylori Rif1]
gi|409898048|gb|AFV45902.1| putative nifU-like protein [Helicobacter pylori Rif2]
gi|410715263|gb|EKQ72686.1| NifU-like protein [Helicobacter pylori GAM100Ai]
Length = 89
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 40/58 (68%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
K V +V+E +RPYL+ DGGNI+V+ V+ + V L+GAC +C SS T+ IER LK
Sbjct: 11 KPVRIVIEKIRPYLLKDGGNIEVLGVKSMKIYVALEGACKTCSSSKITLKNVIERQLK 68
>gi|320585764|gb|EFW98443.1| NifU [Grosmannia clavigera kw1407]
Length = 370
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I+ EDG V +KL+GAC +C SST T+ GIE +L + +
Sbjct: 263 ELLETRIRPAIQEDGGDIEFRGFEDGEVLLKLRGACRTCDSSTVTLKNGIESMLM-HYIE 321
Query: 143 AIKDIRQVYDEE 154
+K +RQV D+E
Sbjct: 322 EVKVVRQVLDQE 333
>gi|293375093|ref|ZP_06621383.1| NifU-like protein [Turicibacter sanguinis PC909]
gi|325841245|ref|ZP_08167346.1| NifU-like protein [Turicibacter sp. HGF1]
gi|292646287|gb|EFF64307.1| NifU-like protein [Turicibacter sanguinis PC909]
gi|325489926|gb|EGC92273.1| NifU-like protein [Turicibacter sp. HGF1]
Length = 78
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 42/62 (67%)
Query: 78 TAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
T K + +LE +RPYL DGG+++ + EDG+V V++ GAC C S +T+ GIE++L
Sbjct: 4 TEKQIVEILEKLRPYLQRDGGDVEYIKFEDGIVYVRMLGACVGCASMDSTLKDGIEQILL 63
Query: 138 EK 139
E+
Sbjct: 64 EE 65
>gi|420460975|ref|ZP_14959770.1| hypothetical protein HPHPA27_1490 [Helicobacter pylori Hp A-27]
gi|393074549|gb|EJB75308.1| hypothetical protein HPHPA27_1490 [Helicobacter pylori Hp A-27]
Length = 89
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 40/58 (68%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
K V +V+E +RPYL+ DGGNI+V+ V+ + V L+GAC +C SS T+ IER LK
Sbjct: 11 KPVRIVIEKIRPYLLKDGGNIEVLGVKSMKIYVALEGACKTCSSSKITLKNVIERQLK 68
>gi|358378221|gb|EHK15903.1| hypothetical protein TRIVIDRAFT_65266 [Trichoderma virens Gv29-8]
Length = 289
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I+ EDG V +KL+GAC +C SST T+ GIE +L + +
Sbjct: 194 ELLETRIRPAIQEDGGDIEFRGFEDGQVLLKLRGACRTCDSSTVTLKNGIEGMLMH-YIE 252
Query: 143 AIKDIRQVYDEE 154
++ ++Q+ DEE
Sbjct: 253 EVQGVKQILDEE 264
>gi|144900396|emb|CAM77260.1| NifU domain protein [Magnetospirillum gryphiswaldense MSR-1]
Length = 182
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
D+ + +L+ VRP + DGG+I S +DG+V V LQGAC CPSST T+ GIE +
Sbjct: 108 DIVRQIKELLDTRVRPAVAQDGGDIIFRSFDDGIVYVHLQGACSGCPSSTATLKHGIENM 167
Query: 136 LK 137
LK
Sbjct: 168 LK 169
>gi|390944855|ref|YP_006408616.1| thioredoxin-like protein [Belliella baltica DSM 15883]
gi|390418283|gb|AFL85861.1| thioredoxin-like protein [Belliella baltica DSM 15883]
Length = 80
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 82 VDLVLEDVRPYLIADGGNIDVVSVEDG-VVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
++ L+++RPYL ADGGN+ VV + D V+ ++L GAC SCP ST T+ G+E +K
Sbjct: 7 IEQALDNIRPYLEADGGNVRVVELTDEMVLRLELTGACSSCPMSTMTLKAGVEEAIKRAI 66
Query: 141 GDAIK 145
+ I+
Sbjct: 67 PEIIR 71
>gi|154254042|ref|YP_001414866.1| scaffold protein Nfu/NifU [Parvibaculum lavamentivorans DS-1]
gi|154157992|gb|ABS65209.1| Scaffold protein Nfu/NifU [Parvibaculum lavamentivorans DS-1]
Length = 201
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
VRP + DGG+I E+GVV + +QGAC CPSST T+ G+E +LK + I ++R
Sbjct: 141 VRPAVAQDGGDITFQGYEEGVVFLNMQGACAGCPSSTVTLKRGVENMLKHYIPE-IVEVR 199
Query: 149 QV 150
QV
Sbjct: 200 QV 201
>gi|431796891|ref|YP_007223795.1| thioredoxin-like protein [Echinicola vietnamensis DSM 17526]
gi|430787656|gb|AGA77785.1| thioredoxin-like protein [Echinicola vietnamensis DSM 17526]
Length = 194
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%)
Query: 69 LYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTM 128
L+ + ++ K ++ E +RP + DGG I S +DGVV V LQGAC CPSST T+
Sbjct: 111 LFDENDSEVVKKIKGILDEYIRPAVEQDGGAIIFHSFQDGVVKVLLQGACSGCPSSTVTL 170
Query: 129 SMGIERVLKEKFGDAIKDIR 148
GIE +L D +K +
Sbjct: 171 KAGIENLLTRMLPDDVKTVE 190
>gi|31874276|emb|CAD98142.1| hypothetical protein [Homo sapiens]
Length = 242
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 59/114 (51%), Gaps = 8/114 (7%)
Query: 26 TKFNERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVD 83
TK NE L + +KP +++ S + PS AGS ++ A +
Sbjct: 122 TKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPSGEAGSE------EDDEVVAMIKE 175
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
L+ +RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L+
Sbjct: 176 LLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQ 229
>gi|420411229|ref|ZP_14910361.1| hypothetical protein HPNQ4228_0094 [Helicobacter pylori NQ4228]
gi|393030018|gb|EJB31097.1| hypothetical protein HPNQ4228_0094 [Helicobacter pylori NQ4228]
Length = 89
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 40/58 (68%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
K V +V+E +RPYL+ DGGNI+V+ V+ + V L+GAC +C SS T+ IER LK
Sbjct: 11 KPVRIVIEKIRPYLLKDGGNIEVLGVKSMKIYVTLEGACKTCSSSKITLKNVIERQLK 68
>gi|385800463|ref|YP_005836867.1| nitrogen-fixing NifU domain-containing protein [Halanaerobium
praevalens DSM 2228]
gi|309389827|gb|ADO77707.1| nitrogen-fixing NifU domain protein [Halanaerobium praevalens DSM
2228]
Length = 73
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
Query: 86 LEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
++ +RP L ADGG+++++ V E G+V VKL GAC CP ST T+ GIE+ LK+ + +
Sbjct: 9 IDKIRPSLQADGGDVELIEVTEAGIVKVKLLGACSGCPMSTLTIKNGIEKTLKQNV-EGV 67
Query: 145 KDIRQV 150
K+++ V
Sbjct: 68 KEVQSV 73
>gi|340374369|ref|XP_003385710.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Amphimedon queenslandica]
Length = 264
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 7/130 (5%)
Query: 26 TKFNERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVD 83
TK ++ + + +IKP +V+ S I+ + P+G P + + K +
Sbjct: 120 TKADDDMPWSTIKPHVYATVMDFFASGLPVIKEE--ATPSGDLPAEEDEDETVMMIK--E 175
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDA 143
L+ +RP + DGG+I V +DG+V +K+QG+C +CPSST T+ G+E ++ + +
Sbjct: 176 LLDTRIRPTVQEDGGDIVFVDFKDGIVKLKMQGSCSNCPSSTVTLKAGVENMI-QFYVPE 234
Query: 144 IKDIRQVYDE 153
+K + QV +E
Sbjct: 235 VKGVEQVEEE 244
>gi|237841427|ref|XP_002370011.1| hypothetical protein TGME49_021920 [Toxoplasma gondii ME49]
gi|211967675|gb|EEB02871.1| hypothetical protein TGME49_021920 [Toxoplasma gondii ME49]
Length = 517
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 65 SSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSV--EDGVVSVKLQGACGSCP 122
SSP S + L + V+ VLE VRPYL GGN+ +V + E V + +GAC +CP
Sbjct: 282 SSPSASS--EVGLNSTMVEQVLESVRPYLRGHGGNVKLVELDSEKKTVRLAFKGACSTCP 339
Query: 123 SSTTTMSMGIERVLKEKFGD-AIKDIRQ--VYDEEVRETTVE 161
S+ T+ G++ L+E + D ++++ + V++EE++ T+E
Sbjct: 340 SAHQTLYEGLQGALREVWPDLSVEEAKDDGVWEEELQPLTIE 381
>gi|410719234|gb|AFV80045.1| nitrogen-fixing NifU domain-containing protein [Spironucleus
salmonicida]
Length = 169
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
+ P L DGG+ +++ +++G+ +KL GACGSCPSST T+ IER+ E F + IK+++
Sbjct: 109 IWPILNRDGGSCELLEIKEGIAYLKLTGACGSCPSSTGTIKNLIERLAVE-FVEGIKEVQ 167
Query: 149 QV 150
QV
Sbjct: 168 QV 169
>gi|283856470|ref|YP_163150.2| scaffold protein Nfu/NifU [Zymomonas mobilis subsp. mobilis ZM4]
gi|283775474|gb|AAV90039.2| Scaffold protein Nfu/NifU [Zymomonas mobilis subsp. mobilis ZM4]
Length = 183
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
D+ + DL+ VRP + DGG+I EDG+V + ++GAC CPSS T+ G+E +
Sbjct: 110 DVILQIKDLIDSRVRPAVARDGGDIVFQKFEDGIVYLSMRGACAGCPSSVATLKQGVETL 169
Query: 136 LKEKFGDAIKDIRQV 150
LK F IK++R +
Sbjct: 170 LKH-FVPEIKEVRAI 183
>gi|217033876|ref|ZP_03439300.1| hypothetical protein HP9810_870g8 [Helicobacter pylori 98-10]
gi|384895263|ref|YP_005769252.1| NifU family protein [Helicobacter pylori 35A]
gi|384899725|ref|YP_005775105.1| NifU [Helicobacter pylori F30]
gi|385218148|ref|YP_005779624.1| NifU [Helicobacter pylori F16]
gi|420397707|ref|ZP_14896923.1| hypothetical protein HPCPY1313_1562 [Helicobacter pylori CPY1313]
gi|420401063|ref|ZP_14900262.1| hypothetical protein HPCPY3281_1652 [Helicobacter pylori CPY3281]
gi|420407623|ref|ZP_14906787.1| hypothetical protein HPCPY6311_1489 [Helicobacter pylori CPY6311]
gi|216943639|gb|EEC23084.1| hypothetical protein HP9810_870g8 [Helicobacter pylori 98-10]
gi|315585879|gb|ADU40260.1| NifU family protein [Helicobacter pylori 35A]
gi|317178197|dbj|BAJ55986.1| conserved hypothetical nifU-like protein [Helicobacter pylori F16]
gi|317179669|dbj|BAJ57457.1| conserved hypothetical nifU-like protein [Helicobacter pylori F30]
gi|393011252|gb|EJB12440.1| hypothetical protein HPCPY1313_1562 [Helicobacter pylori CPY1313]
gi|393016671|gb|EJB17830.1| hypothetical protein HPCPY3281_1652 [Helicobacter pylori CPY3281]
gi|393021081|gb|EJB22215.1| hypothetical protein HPCPY6311_1489 [Helicobacter pylori CPY6311]
Length = 89
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 40/58 (68%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
K V +V+E +RPYL+ DGGNI+V+ V+ + V L+GAC +C SS T+ IER LK
Sbjct: 11 KPVRVVIEKIRPYLLKDGGNIEVLGVKSMKIYVALEGACKTCSSSKITLKNVIERQLK 68
>gi|32267366|ref|NP_861398.1| hypothetical protein HH1867 [Helicobacter hepaticus ATCC 51449]
gi|32263419|gb|AAP78464.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
Length = 91
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%)
Query: 82 VDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
V++V++ VRP L DGG+I ++ ++D V V+L+GAC CPSS T+ IE LKE+
Sbjct: 13 VEIVIQKVRPTLTLDGGDITLLGIKDAKVYVRLEGACKGCPSSANTLKYAIENRLKEEI 71
>gi|397677506|ref|YP_006519044.1| Scaffold protein Nfu/NifU [Zymomonas mobilis subsp. mobilis ATCC
29191]
gi|395398195|gb|AFN57522.1| Scaffold protein Nfu/NifU [Zymomonas mobilis subsp. mobilis ATCC
29191]
Length = 183
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
DL+ VRP + DGG+I EDG+V + ++GAC CPSS T+ G+E +LK F
Sbjct: 117 DLIDSRVRPAVARDGGDIVFQKFEDGIVYLSMRGACAGCPSSVATLKQGVETLLKH-FVP 175
Query: 143 AIKDIRQV 150
IK++R +
Sbjct: 176 EIKEVRAI 183
>gi|420402596|ref|ZP_14901784.1| hypothetical protein HPCPY6081_1458 [Helicobacter pylori CPY6081]
gi|393016063|gb|EJB17223.1| hypothetical protein HPCPY6081_1458 [Helicobacter pylori CPY6081]
Length = 89
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 40/58 (68%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
K V +V+E +RPYL+ DGGNI+V+ V+ + V L+GAC +C SS T+ IER LK
Sbjct: 11 KPVRVVIEKIRPYLLKDGGNIEVLGVKSMKIYVALEGACKTCSSSKITLKNVIERQLK 68
>gi|374313093|ref|YP_005059523.1| nitrogen-fixing NifU domain-containing protein [Granulicella
mallensis MP5ACTX8]
gi|358755103|gb|AEU38493.1| nitrogen-fixing NifU domain-containing protein [Granulicella
mallensis MP5ACTX8]
Length = 197
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Query: 69 LYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTM 128
L++ H DL + V +E VRPYL GG+ ++ +++G+V ++L G CGSCPSS+ T+
Sbjct: 103 LHNLHPDDLETR-VLRGIESVRPYLQEHGGDCELAGLDNGIVRLRLHGNCGSCPSSSLTL 161
Query: 129 SMGIERVLKEKFGDAIKDIRQVYDE 153
+E L + A DI+++ E
Sbjct: 162 KNAVEEALFQ----AAPDIKEIIAE 182
>gi|294085162|ref|YP_003551922.1| nitrogen-fixing NifU domain-containing protein [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292664737|gb|ADE39838.1| nitrogen-fixing NifU domain protein [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 187
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 4/62 (6%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
VRP + DGG+I +DGVV+++++GAC CPSST T+ MGIE +LK I +R
Sbjct: 125 VRPAVAMDGGDIVFQDFDDGVVTLQMRGACQGCPSSTATLKMGIENMLKHY----IPQVR 180
Query: 149 QV 150
+V
Sbjct: 181 EV 182
>gi|126740480|ref|ZP_01756167.1| nifU domain protein [Roseobacter sp. SK209-2-6]
gi|126718281|gb|EBA14996.1| nifU domain protein [Roseobacter sp. SK209-2-6]
Length = 187
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Query: 29 NERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVDLVL 86
+E +++ IKP ++++ S + + A + S +S ++ + DL+
Sbjct: 66 SEDVEWDHIKPAILGAIMEHFQSGQPVLNAGGAQS---SGHAEHSGEDAEVVNQIKDLLD 122
Query: 87 EDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
VRP + DGG+I + GVV + +QGAC CPSST T+ MGIE +L+
Sbjct: 123 SRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRH 174
>gi|114331232|ref|YP_747454.1| NifU domain-containing protein [Nitrosomonas eutropha C91]
gi|114308246|gb|ABI59489.1| nitrogen-fixing NifU domain protein [Nitrosomonas eutropha C91]
Length = 186
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 40/54 (74%)
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
L+ E+VRPYL DGG++ V+++E ++ + QGACG+CPSS + GIE++L+
Sbjct: 122 LLEEEVRPYLQHDGGDLHVLALEGSLLRIHYQGACGTCPSSISGTLRGIEQLLR 175
>gi|311747521|ref|ZP_07721306.1| NifU domain protein [Algoriphagus sp. PR1]
gi|126574883|gb|EAZ79254.1| NifU domain protein [Algoriphagus sp. PR1]
Length = 82
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 51/78 (65%), Gaps = 6/78 (7%)
Query: 74 QFDLTAKNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGI 132
Q +L K ++ L+ +RPYL ADGGN+ +V + ED V+ +++ G+CGSCP S+ T+ G+
Sbjct: 2 QTELKNK-IEFALDTIRPYLEADGGNVRIVELTEDMVLRIEMLGSCGSCPMSSMTLKAGV 60
Query: 133 ERVLKEKFGDAIKDIRQV 150
E +K AI +I +V
Sbjct: 61 EDAIKR----AIPEITKV 74
>gi|387793238|ref|YP_006258303.1| thioredoxin-like protein [Solitalea canadensis DSM 3403]
gi|379656071|gb|AFD09127.1| thioredoxin-like protein [Solitalea canadensis DSM 3403]
Length = 97
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Query: 82 VDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIER-VLKE 138
V+ L +RPYL ADGGN++V+ V +D ++ +KL G+CGSCP S T+ GIE+ V++E
Sbjct: 10 VEGALNQIRPYLEADGGNVEVLEVTDDNILKLKLLGSCGSCPMSIMTLKAGIEQAVMRE 68
>gi|385226116|ref|YP_005786041.1| NifU family protein [Helicobacter pylori 83]
gi|332674262|gb|AEE71079.1| NifU family protein [Helicobacter pylori 83]
Length = 89
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 40/58 (68%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
K V +V+E +RPYL+ DGGNI+V+ V+ + V L+GAC +C SS T+ IER LK
Sbjct: 11 KPVRVVIEKIRPYLLKDGGNIEVLGVKSMKIYVTLEGACKTCSSSKITLKNVIERQLK 68
>gi|242278148|ref|YP_002990277.1| nitrogen-fixing NifU domain-containing protein [Desulfovibrio
salexigens DSM 2638]
gi|242121042|gb|ACS78738.1| nitrogen-fixing NifU domain protein [Desulfovibrio salexigens DSM
2638]
Length = 74
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 81 NVDLVLEDVRPYLIADGGNIDVVSVED-GVVSVKLQGACGSCPSSTTTMSMGIERVL 136
V+ L+ VRP L ADGGN+++V V D G+ V+LQGAC CP S T+ IER L
Sbjct: 4 KVEAALDKVRPLLQADGGNVELVEVTDKGIAKVRLQGACKGCPMSQITLRNAIERTL 60
>gi|126656503|ref|ZP_01727764.1| Fe-S cluster assembly protein NifU [Cyanothece sp. CCY0110]
gi|126622189|gb|EAZ92896.1| Fe-S cluster assembly protein NifU [Cyanothece sp. CCY0110]
Length = 293
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 38/53 (71%)
Query: 87 EDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
E+VRP L DGG++D+ V+ +V V L+GAC SCPSST T+ M IE L+++
Sbjct: 231 EEVRPALAQDGGDVDLFDVDGDLVKVILKGACDSCPSSTATLKMAIEARLRDR 283
>gi|440749103|ref|ZP_20928352.1| hypothetical protein C943_0916 [Mariniradius saccharolyticus AK6]
gi|436482464|gb|ELP38579.1| hypothetical protein C943_0916 [Mariniradius saccharolyticus AK6]
Length = 83
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ ++ L+ +RPYL ADGGN+ +V + +D V+ ++L GAC SCP ST T+ G+E +K
Sbjct: 8 ERIETALDSIRPYLEADGGNVKIVDLTDDMVLRLELMGACSSCPMSTMTLKAGVEEAIKR 67
Query: 139 KFGDAIKDIRQV 150
AI +I +V
Sbjct: 68 ----AIPEITRV 75
>gi|354568530|ref|ZP_08987694.1| Fe-S cluster assembly protein NifU [Fischerella sp. JSC-11]
gi|353540253|gb|EHC09730.1| Fe-S cluster assembly protein NifU [Fischerella sp. JSC-11]
Length = 297
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 87 EDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
E+VRP LIADGG++++ VE V V LQGACGSC SS T+ + IE L+++
Sbjct: 235 EEVRPILIADGGDVELFDVEGDHVKVILQGACGSCSSSIATLKIAIESRLRDR 287
>gi|367054808|ref|XP_003657782.1| hypothetical protein THITE_2123803 [Thielavia terrestris NRRL 8126]
gi|347005048|gb|AEO71446.1| hypothetical protein THITE_2123803 [Thielavia terrestris NRRL 8126]
Length = 330
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ VRP + DGG+++ EDG V +KL+GAC +C SST T+ GIE +L + +
Sbjct: 223 ELLETRVRPAIQEDGGDVEFRGFEDGYVMLKLRGACRTCDSSTVTLKNGIEGMLMH-YIE 281
Query: 143 AIKDIRQVYDEE 154
+K + Q+ D+E
Sbjct: 282 EVKGVHQILDQE 293
>gi|387783007|ref|YP_005793720.1| nifU-like protein [Helicobacter pylori 51]
gi|261838766|gb|ACX98532.1| nifU-like protein [Helicobacter pylori 51]
Length = 89
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 40/58 (68%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
K V +V+E +RPYL+ DGGNI+V+ V+ + V L+GAC +C SS T+ IER LK
Sbjct: 11 KPVRVVIEKIRPYLLKDGGNIEVLGVKSMKIYVALEGACKTCSSSKITLKNIIERQLK 68
>gi|108761437|ref|YP_634156.1| NifU family protein [Myxococcus xanthus DK 1622]
gi|108465317|gb|ABF90502.1| NifU family protein [Myxococcus xanthus DK 1622]
Length = 188
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
D++ ++RP + DGG+I + EDG+V + ++GAC CPSST T+ MGIE L+E
Sbjct: 122 DILDNEIRPAVAMDGGDITLDRFEDGIVYLHMKGACAGCPSSTATLKMGIEGRLRE 177
>gi|334312031|ref|XP_001381686.2| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Monodelphis domestica]
Length = 196
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
+RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L+ + ++ +
Sbjct: 123 IRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQ-FYIPEVEGVE 181
Query: 149 QVYDEEVRE 157
QV D+E+ E
Sbjct: 182 QVVDDELEE 190
>gi|282154803|ref|NP_001164062.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform 1
precursor [Mus musculus]
gi|74211556|dbj|BAE26508.1| unnamed protein product [Mus musculus]
Length = 256
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 10/133 (7%)
Query: 26 TKFNERLQFISIKPK--NSVLQKSGSHETAIRASNPSAP--AGSSPGLYSAHQFDLTAKN 81
TK NE L + +KP +++ S + P P AGSS ++ A
Sbjct: 120 TKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPPPPGEAGSS-----EEDDEVVAMI 174
Query: 82 VDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFG 141
+L+ +RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L + +
Sbjct: 175 KELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNML-QFYI 233
Query: 142 DAIKDIRQVYDEE 154
++ + QV D++
Sbjct: 234 PEVEGVEQVMDDD 246
>gi|254495078|ref|ZP_05108002.1| NifU-like protein [Polaribacter sp. MED152]
gi|85819428|gb|EAQ40585.1| NifU-like protein [Polaribacter sp. MED152]
Length = 301
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSV--EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
D++ E ++P + DGGNI S ++ VVSV LQGAC CPSST T+ GIE +LKE
Sbjct: 230 DILDEYIKPAVAGDGGNIAFRSYDEQNKVVSVILQGACSGCPSSTATLKNGIESLLKEML 289
Query: 141 GDAIKDI 147
+ I ++
Sbjct: 290 PNQINEV 296
>gi|398016839|ref|XP_003861607.1| hypothetical protein, conserved [Leishmania donovani]
gi|322499834|emb|CBZ34907.1| hypothetical protein, conserved [Leishmania donovani]
Length = 284
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP L ADGGN+ + +++G V + L+G+C SCPSS T+ GIER+L +
Sbjct: 190 ELLATRIRPMLRADGGNVRFIDMDEGTVFLLLEGSCKSCPSSHVTLKSGIERMLMHWIPE 249
Query: 143 AIKDIRQVYDE 153
+ + ++V DE
Sbjct: 250 VV-EAQEVSDE 259
>gi|108563846|ref|YP_628162.1| NifU-like protein [Helicobacter pylori HPAG1]
gi|107837619|gb|ABF85488.1| conserved hypothetical nifU-like protein [Helicobacter pylori
HPAG1]
Length = 89
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 40/58 (68%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
K V +V+E +RPYL+ DGGNI+V+ V+ + V L+GAC +C SS T+ IER LK
Sbjct: 11 KPVRIVIEKIRPYLLKDGGNIEVLGVKSMKIYVALEGACKTCSSSKITLKNVIERQLK 68
>gi|430747488|ref|YP_007206617.1| thioredoxin-like protein [Singulisphaera acidiphila DSM 18658]
gi|430019208|gb|AGA30922.1| thioredoxin-like protein [Singulisphaera acidiphila DSM 18658]
Length = 85
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 87 EDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
E VRP L ADGG++++V + ED +V V+LQGAC C S++ T++MGIE LK
Sbjct: 21 EHVRPTLRADGGDLELVDIDEDNIVQVRLQGACQGCSSASYTLTMGIEATLK 72
>gi|390603762|gb|EIN13153.1| HIRA-interacting protein 5 [Punctularia strigosozonata HHB-11173
SS5]
Length = 218
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 89 VRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDI 147
VRP ++ DGG+I+ + EDG+V VKL+G+C C SST T+ GIER+L + +K +
Sbjct: 128 VRPAIMEDGGDIEYRGMTEDGIVQVKLKGSCRGCDSSTVTLKSGIERMLMHYIPE-VKGV 186
Query: 148 RQVYDEE 154
Q+ D+E
Sbjct: 187 EQILDQE 193
>gi|326801010|ref|YP_004318829.1| Scaffold protein Nfu/NifU [Sphingobacterium sp. 21]
gi|326551774|gb|ADZ80159.1| Scaffold protein Nfu/NifU [Sphingobacterium sp. 21]
Length = 184
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 78 TAKNVDLVLED-VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
T K + VL D VRP + DGG I S ++GVV+V+L+G+C CPSST T+ GIE +L
Sbjct: 110 TEKKIQQVLHDYVRPAVEQDGGAIAYKSFDEGVVTVELRGSCSGCPSSTITLKAGIEGLL 169
Query: 137 K 137
K
Sbjct: 170 K 170
>gi|148666782|gb|EDK99198.1| mCG130855, isoform CRA_b [Mus musculus]
Length = 256
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 10/133 (7%)
Query: 26 TKFNERLQFISIKPK--NSVLQKSGSHETAIRASNPSAP--AGSSPGLYSAHQFDLTAKN 81
TK NE L + +KP +++ S + P P AGSS ++ A
Sbjct: 120 TKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPPPPGEAGSS-----EEDDEVVAMI 174
Query: 82 VDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFG 141
+L+ +RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L + +
Sbjct: 175 KELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNML-QFYI 233
Query: 142 DAIKDIRQVYDEE 154
++ + QV D++
Sbjct: 234 PEVEGVEQVMDDD 246
>gi|440907806|gb|ELR57903.1| NFU1 iron-sulfur cluster scaffold-like protein, mitochondrial,
partial [Bos grunniens mutus]
Length = 235
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 59/114 (51%), Gaps = 8/114 (7%)
Query: 26 TKFNERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVD 83
TK NE L + +KP +++ S + PS AGS ++ A +
Sbjct: 116 TKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPSGEAGSE------DDDEVVAMIKE 169
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
L+ +RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L+
Sbjct: 170 LLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQ 223
>gi|56695297|ref|YP_165645.1| NifU domain-containing protein [Ruegeria pomeroyi DSS-3]
gi|56677034|gb|AAV93700.1| nifU domain protein [Ruegeria pomeroyi DSS-3]
Length = 187
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 5/111 (4%)
Query: 30 ERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVDLVLE 87
E +++ IKP +V++ S + + A A GS +S ++ + L+
Sbjct: 67 EGVEWDHIKPAILGAVMEHYQSGQPVMGAD---AQTGSGHAEHSGEDAEVVTQIKALLDS 123
Query: 88 DVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
VRP + DGG+I + GVV + +QGAC CPSST T+ MGIE +L+
Sbjct: 124 RVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRH 174
>gi|326386713|ref|ZP_08208334.1| nitrogen-fixing NifU-like protein [Novosphingobium nitrogenifigens
DSM 19370]
gi|326208766|gb|EGD59562.1| nitrogen-fixing NifU-like protein [Novosphingobium nitrogenifigens
DSM 19370]
Length = 191
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
D+ + +DL+ +RP + DGG+I DGVV +++QGAC CPSS+ T+ GIE +
Sbjct: 118 DIVDQILDLIETRIRPAVANDGGDISYRGFRDGVVYLRMQGACSGCPSSSATLKNGIEAL 177
Query: 136 LKE 138
LK
Sbjct: 178 LKH 180
>gi|254461257|ref|ZP_05074673.1| NifU domain protein [Rhodobacterales bacterium HTCC2083]
gi|206677846|gb|EDZ42333.1| NifU domain protein [Rhodobacteraceae bacterium HTCC2083]
Length = 188
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%)
Query: 61 APAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGS 120
AP S ++ ++ + +L+ VRP + DGG+I E G+V + +QGAC
Sbjct: 98 APPNSGHAEHTGEDGEIVVQIKELLDSRVRPAVAQDGGDITFHGFERGIVYLHMQGACAG 157
Query: 121 CPSSTTTMSMGIERVLKE 138
CPSST T+ MGIE +L+
Sbjct: 158 CPSSTLTLKMGIENLLRH 175
>gi|425790034|ref|YP_007017954.1| NifU [Helicobacter pylori Aklavik117]
gi|425628349|gb|AFX91817.1| conserved hypothetical nifU-like protein [Helicobacter pylori
Aklavik117]
Length = 89
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 40/58 (68%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
K V +V+E +RPYL+ DGGN++V+ V+ + V L+GAC +C SS T+ IER LK
Sbjct: 11 KPVRIVIEKIRPYLLKDGGNVEVLGVKSMKIYVALEGACKTCSSSKITLKNVIERQLK 68
>gi|393218959|gb|EJD04447.1| HIRA-interacting protein 5 [Fomitiporia mediterranea MF3/22]
Length = 298
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIER 134
D A +L+ VRP ++ DGG+I+ +DG+V +KL+G+C C SST T+ GIER
Sbjct: 184 DTVAMIKELLQTRVRPAIMEDGGDIEYCEFSDDGIVKLKLKGSCRGCSSSTVTLKTGIER 243
Query: 135 VLKEKFGDAIKDIRQVYDEE 154
++ + +K + QV DEE
Sbjct: 244 MMMHYIPE-VKGVEQVVDEE 262
>gi|223984131|ref|ZP_03634283.1| hypothetical protein HOLDEFILI_01575 [Holdemania filiformis DSM
12042]
gi|223963925|gb|EEF68285.1| hypothetical protein HOLDEFILI_01575 [Holdemania filiformis DSM
12042]
Length = 82
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 38/52 (73%)
Query: 85 VLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
V+E +RPY+ DGG+++ VS+EDG+V+VK+ GAC C S T+ GIE +L
Sbjct: 11 VIEKIRPYIQRDGGDVEFVSLEDGIVTVKMLGACSECLSLDATLKDGIEAIL 62
>gi|158520102|ref|YP_001527972.1| NifU domain-containing protein [Desulfococcus oleovorans Hxd3]
gi|158508928|gb|ABW65895.1| nitrogen-fixing NifU domain protein [Desulfococcus oleovorans Hxd3]
Length = 72
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 40/59 (67%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V L+ +RP L ADGG++++V VE+G VSV+L+GAC CP S T+ IE LK+
Sbjct: 3 EQVKAALDKIRPQLQADGGDVELVDVENGNVSVRLKGACAGCPMSQITLKQRIEAYLKK 61
>gi|146089377|ref|XP_001470367.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134070400|emb|CAM68738.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 284
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP L ADGGN+ + +++G V + L+G+C SCPSS T+ GIER+L +
Sbjct: 190 ELLATRIRPMLRADGGNVRFIDMDEGTVFLLLEGSCKSCPSSHVTLKSGIERMLMHWIPE 249
Query: 143 AIKDIRQVYDE 153
+ + ++V DE
Sbjct: 250 VV-EAQEVSDE 259
>gi|299822027|ref|ZP_07053914.1| NifU domain protein [Listeria grayi DSM 20601]
gi|299816655|gb|EFI83892.1| NifU domain protein [Listeria grayi DSM 20601]
Length = 79
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIER 134
+++ + V+ L+ RPYL DGG+ +++ V +DG V +KL GAC SC SS T+ +G+E
Sbjct: 4 EISYEAVERALQKFRPYLARDGGDYELIDVTKDGTVKIKLLGACESCASSEITLKVGLET 63
Query: 135 VLKEKFGDAIKDIRQVY 151
L +K K++ QVY
Sbjct: 64 TLADKL-IGFKEVVQVY 79
>gi|383449496|ref|YP_005356217.1| NifU-like protein [Flavobacterium indicum GPTSA100-9]
gi|380501118|emb|CCG52160.1| NifU-like protein [Flavobacterium indicum GPTSA100-9]
Length = 79
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 81 NVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
NV+ L+++RP+L +DGGNI +V + ED V V+L+GAC SC S +TM G+E +K
Sbjct: 9 NVEKALDEIRPFLNSDGGNISLVEIIEDKHVKVRLEGACTSCSLSISTMKAGVETTIK 66
>gi|66808847|ref|XP_638146.1| NIF system FeS cluster assembly domain-containing protein
[Dictyostelium discoideum AX4]
gi|60466582|gb|EAL64634.1| NIF system FeS cluster assembly domain-containing protein
[Dictyostelium discoideum AX4]
Length = 314
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
+L+ +RP ++ DGGNI + +DG+V V+LQG C SC SS T+ GIER+L
Sbjct: 218 ELIETRIRPTVLEDGGNIKYMGFKDGIVMVQLQGTCSSCSSSQATLKGGIERML 271
>gi|451941060|ref|YP_007461698.1| NifU-related protein [Bartonella australis Aust/NH1]
gi|451900447|gb|AGF74910.1| NifU-related protein [Bartonella australis Aust/NH1]
Length = 192
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%)
Query: 69 LYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTM 128
Y+ D+ A +L+ VRP + DGG+I E+G+V + ++GAC CPSST T+
Sbjct: 110 FYNEKDADIVATIKELLETRVRPAVANDGGDITFRGFENGIVYLNMRGACSGCPSSTATL 169
Query: 129 SMGIERVLKEKFGDAI 144
GIE +L+ D +
Sbjct: 170 KYGIENLLRHFIPDVV 185
>gi|189200054|ref|XP_001936364.1| HIRA-interacting protein 5 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187983463|gb|EDU48951.1| HIRA-interacting protein 5 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 312
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ VRP + DGG+I+ DG V +KL+GAC +C SST T+ GIE +L + +
Sbjct: 205 ELLETRVRPAIQEDGGDIEFRGFNDGQVWLKLRGACRTCDSSTVTLKNGIESMLMH-YIE 263
Query: 143 AIKDIRQVYDEE 154
+K ++QV D+E
Sbjct: 264 EVKGVQQVLDQE 275
>gi|390558904|ref|ZP_10243292.1| putative Iron-sulphur cluster assembly protein,contains Rieske
(2Fe-2S) domain (fragment, part 2) [Nitrolancetus
hollandicus Lb]
gi|390174521|emb|CCF82583.1| putative Iron-sulphur cluster assembly protein,contains Rieske
(2Fe-2S) domain (fragment, part 2) [Nitrolancetus
hollandicus Lb]
Length = 235
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 86 LEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIK 145
L+ VRPYL + GG+++++ +EDG+ V+LQG+C CPSS+ T+ + +E + ++F I
Sbjct: 39 LDQVRPYLQSHGGDVELLGLEDGIARVRLQGSCRGCPSSSMTLKLAVEDAI-QRFAPEID 97
Query: 146 DI 147
I
Sbjct: 98 GI 99
>gi|61806099|ref|YP_214459.1| NifU-like protein [Prochlorococcus phage P-SSM2]
gi|61374608|gb|AAX44605.1| NifU-like protein [Prochlorococcus phage P-SSM2]
gi|265525310|gb|ACY76107.1| NifU domain-containing protein [Prochlorococcus phage P-SSM2]
Length = 96
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 70 YSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVED--GVVSVKLQGACGSCPSSTTT 127
Y A +LT +NV VLE++ PY+ ADGG + V +E+ G V V+L GAC +C S T
Sbjct: 14 YLATHMELTEENVVRVLEELAPYVEADGGFLQFVEIEEETGYVKVRLGGACETCAMSAMT 73
Query: 128 MSMGIERVLKEKFGDAI 144
+ GIE+ + + D +
Sbjct: 74 LKQGIEKKVMSEIPDCV 90
>gi|254487441|ref|ZP_05100646.1| NifU domain protein [Roseobacter sp. GAI101]
gi|214044310|gb|EEB84948.1| NifU domain protein [Roseobacter sp. GAI101]
Length = 203
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ VRP + DGG+I E GVV + +QGAC CPSST T+ MGIE +L+ +
Sbjct: 136 ELLDSRVRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPE 195
Query: 143 AIKDIRQV 150
+ ++R V
Sbjct: 196 -VTEVRPV 202
>gi|195169040|ref|XP_002025336.1| GL13432 [Drosophila persimilis]
gi|263504975|sp|B4H303.1|NFU1_DROPE RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|194108792|gb|EDW30835.1| GL13432 [Drosophila persimilis]
Length = 282
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
+RP + DGG+I +S E+GVV +K+QG+C SCPSS T+ G++ +L + + ++ +
Sbjct: 186 IRPTVQEDGGDIVFISYENGVVKLKMQGSCSSCPSSIVTLKNGVQNML-QFYIPEVESVE 244
Query: 149 QVYDEEVR 156
QV+D+ R
Sbjct: 245 QVFDDADR 252
>gi|189485737|ref|YP_001956678.1| conserved hypothetical protein [uncultured Termite group 1
bacterium phylotype Rs-D17]
gi|170287696|dbj|BAG14217.1| conserved hypothetical protein [uncultured Termite group 1
bacterium phylotype Rs-D17]
Length = 75
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V+ LE VRP+L AD G+++++ V EDG+V VKL G+CG CP + T+ G+ +K+
Sbjct: 5 EKVEKALESVRPHLQADCGDVELIDVSEDGIVKVKLTGSCGGCPMAAMTLQYGVTNTIKQ 64
Query: 139 KFGDAIKDIRQV 150
+ +KD++ +
Sbjct: 65 AVPE-VKDVQSI 75
>gi|258405531|ref|YP_003198273.1| nitrogen-fixing NifU domain-containing protein [Desulfohalobium
retbaense DSM 5692]
gi|257797758|gb|ACV68695.1| nitrogen-fixing NifU domain protein [Desulfohalobium retbaense DSM
5692]
Length = 73
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDG-VVSVKLQGACGSCPSSTTTMSMGIERVL 136
+ ++ L+ VRP L ADGG+I++V + D +V V+LQGAC CP S T+ G+ERVL
Sbjct: 3 EKIEAALDKVRPVLQADGGDIELVEITDNNIVRVRLQGACKGCPMSQMTLKNGVERVL 60
>gi|345869077|ref|ZP_08821040.1| nifU-like domain protein [Bizionia argentinensis JUB59]
gi|344046561|gb|EGV42222.1| nifU-like domain protein [Bizionia argentinensis JUB59]
Length = 80
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Query: 81 NVDLVLEDVRPYLIADGGNIDVVSVEDG-VVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
N++ L+++RP+L +DGG+I ++S+EDG +V V+L+GAC C + T+ MG+E +K K
Sbjct: 9 NIEKALDEIRPFLQSDGGDISLLSIEDGKLVRVQLEGACVGCSVNQMTLKMGVEMTIK-K 67
Query: 140 FGDAIKDIRQV 150
+ I+ + V
Sbjct: 68 YAPQIEQVVNV 78
>gi|346323858|gb|EGX93456.1| NifU-related protein [Cordyceps militaris CM01]
Length = 498
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFG 141
+L+ +RP + DGG+I+ E+G V++KL+GAC +C SST T+ GIE +L +
Sbjct: 293 ELLETRIRPAIQEDGGDIEFRGFDEEGFVNLKLRGACRTCDSSTVTLKNGIEGMLMH-YI 351
Query: 142 DAIKDIRQVYDEE 154
+ +K +RQ+ DEE
Sbjct: 352 EEVKGVRQILDEE 364
>gi|443319390|ref|ZP_21048623.1| Fe-S cluster assembly protein NifU [Leptolyngbya sp. PCC 6406]
gi|442781077|gb|ELR91184.1| Fe-S cluster assembly protein NifU [Leptolyngbya sp. PCC 6406]
Length = 302
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 61 APAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGS 120
AP P L + + + K +D E+VRP LIADGG++ + VE V VKLQGAC S
Sbjct: 217 APDPDRPTLTTLQKIMMIQKVLD---EEVRPVLIADGGDVQLHDVEGDRVLVKLQGACDS 273
Query: 121 CPSSTTTMSMGIERVLK 137
C SST T+ IE L+
Sbjct: 274 CSSSTETLKYAIEDKLQ 290
>gi|258404239|ref|YP_003196981.1| Fe-S cluster assembly protein NifU [Desulfohalobium retbaense DSM
5692]
gi|257796466|gb|ACV67403.1| Fe-S cluster assembly protein NifU [Desulfohalobium retbaense DSM
5692]
Length = 283
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 56 ASNPSAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQ 115
A P+ PA S+ L + + L D++ +++RP L DGG+I+++ +E V V L+
Sbjct: 191 AQVPTGPAASTKKLTNIQRMQLVN---DVIEKEIRPSLQKDGGDIELIDIEGREVQVALR 247
Query: 116 GACGSCPSSTTTMSMGIERVLKEK 139
G C CPSS T+ +ER L+E+
Sbjct: 248 GMCSGCPSSQLTLKNVVERRLQER 271
>gi|212540194|ref|XP_002150252.1| NifU-related protein [Talaromyces marneffei ATCC 18224]
gi|210067551|gb|EEA21643.1| NifU-related protein [Talaromyces marneffei ATCC 18224]
Length = 321
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I+ E+G+V +KL+GAC +C SST T+ GIE +L + +
Sbjct: 217 ELLETRIRPAIQEDGGDIEFRGFENGIVLLKLRGACRTCDSSTVTLKNGIESMLMH-YIE 275
Query: 143 AIKDIRQVYDEE 154
++ ++QV D+E
Sbjct: 276 EVQGVQQVLDQE 287
>gi|341038530|gb|EGS23522.1| nifu-like protein [Chaetomium thermophilum var. thermophilum DSM
1495]
Length = 326
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ VRP + DGG+I+ +DG V +KL+GAC +C SST T+ GIE +L + +
Sbjct: 224 ELLETRVRPAIQEDGGDIEFRGFKDGYVHLKLRGACRTCDSSTVTLKNGIEGMLMH-YIE 282
Query: 143 AIKDIRQVYDEE 154
+K + QV DEE
Sbjct: 283 EVKGVVQVLDEE 294
>gi|169608792|ref|XP_001797815.1| hypothetical protein SNOG_07481 [Phaeosphaeria nodorum SN15]
gi|111063827|gb|EAT84947.1| hypothetical protein SNOG_07481 [Phaeosphaeria nodorum SN15]
Length = 263
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
+RP + DGG+ID DG V +KL+GAC +C SST T+ GIE +L + + +K ++
Sbjct: 162 IRPSIQEDGGDIDFRGFNDGQVLLKLRGACRTCDSSTVTLKNGIESMLMH-YIEEVKGVQ 220
Query: 149 QVYDEE 154
QV D+E
Sbjct: 221 QVLDQE 226
>gi|282154801|ref|NP_064429.2| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform 2
precursor [Mus musculus]
gi|205830867|sp|Q9QZ23.2|NFU1_MOUSE RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; AltName: Full=HIRA-interacting protein 5;
Short=mHIRIP5; Flags: Precursor
gi|12834577|dbj|BAB22965.1| unnamed protein product [Mus musculus]
Length = 255
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 67/131 (51%), Gaps = 7/131 (5%)
Query: 26 TKFNERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVD 83
TK NE L + +KP +++ S + P P + S ++ A +
Sbjct: 120 TKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPPPPGEAG----SEEDDEVVAMIKE 175
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDA 143
L+ +RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L + +
Sbjct: 176 LLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNML-QFYIPE 234
Query: 144 IKDIRQVYDEE 154
++ + QV D++
Sbjct: 235 VEGVEQVMDDD 245
>gi|85083846|ref|XP_957202.1| HIRA-interacting protein 5 [Neurospora crassa OR74A]
gi|18376131|emb|CAD21196.1| conserved hypothetical protein [Neurospora crassa]
gi|28918289|gb|EAA27966.1| HIRA-interacting protein 5 [Neurospora crassa OR74A]
Length = 326
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I+ EDG+V +KL+GAC +C SST T+ GIE +L + +
Sbjct: 219 ELLETRIRPAIQEDGGDIEFRGFEDGIVKLKLRGACRTCDSSTVTLKNGIEGMLMH-YIE 277
Query: 143 AIKDIRQVYDEE 154
++ + QV D E
Sbjct: 278 EVQGVEQVLDPE 289
>gi|148666781|gb|EDK99197.1| mCG130855, isoform CRA_a [Mus musculus]
Length = 255
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 67/131 (51%), Gaps = 7/131 (5%)
Query: 26 TKFNERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVD 83
TK NE L + +KP +++ S + P P + S ++ A +
Sbjct: 120 TKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPPPPGEAG----SEEDDEVVAMIKE 175
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDA 143
L+ +RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L + +
Sbjct: 176 LLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNML-QFYIPE 234
Query: 144 IKDIRQVYDEE 154
++ + QV D++
Sbjct: 235 VEGVEQVMDDD 245
>gi|395326149|gb|EJF58562.1| HIRA-interacting protein 5 [Dichomitus squalens LYAD-421 SS1]
Length = 306
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 83 DLVLEDVRPYLIADGGNIDVVS-VEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFG 141
+L+ VRP ++ DGG+I+ +DGVV VKL+G+C C SST T+ GIER+L
Sbjct: 201 ELLETRVRPAIMEDGGDIEYRGFTDDGVVQVKLKGSCRGCSSSTVTLKSGIERMLMHYIP 260
Query: 142 DAIKDIRQVYDEE 154
+ +K + Q+ D+E
Sbjct: 261 E-VKGVEQILDQE 272
>gi|195447128|ref|XP_002071076.1| GK25604 [Drosophila willistoni]
gi|263505026|sp|B4NE93.1|NFU1_DROWI RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|194167161|gb|EDW82062.1| GK25604 [Drosophila willistoni]
Length = 289
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
+RP + DGG+I +S ++GVV +K+QG+C SCPSS T+ G++ +L + + ++ +
Sbjct: 191 IRPTVQEDGGDIVFMSYDNGVVKLKMQGSCSSCPSSIVTLKNGVQNML-QFYIPEVESVE 249
Query: 149 QVYDE 153
QV+DE
Sbjct: 250 QVFDE 254
>gi|34500321|gb|AAQ73785.1| NifU-like protein HIRIP5, partial [Mus musculus]
Length = 245
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 67/131 (51%), Gaps = 7/131 (5%)
Query: 26 TKFNERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVD 83
TK NE L + +KP +++ S + P P + S ++ A +
Sbjct: 110 TKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPPPPGEAG----SEEDDEVVAMIKE 165
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDA 143
L+ +RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L + +
Sbjct: 166 LLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNML-QFYIPE 224
Query: 144 IKDIRQVYDEE 154
++ + QV D++
Sbjct: 225 VEGVEQVMDDD 235
>gi|88608783|ref|YP_506689.1| NifU-like domain-containing protein [Neorickettsia sennetsu str.
Miyayama]
gi|88600952|gb|ABD46420.1| NifU-like domain protein [Neorickettsia sennetsu str. Miyayama]
Length = 180
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
+++ K +++ VRP +I DGGNI +DG+V +KLQGAC CPS++ T+ GIE +
Sbjct: 107 EVSKKIQEIIDTKVRPSVIEDGGNIVFKGYKDGIVYLKLQGACAGCPSASVTLKDGIENL 166
Query: 136 LKEKFGDAIKDIRQV 150
L + + +++++QV
Sbjct: 167 L-QYYIPEVREVQQV 180
>gi|157870953|ref|XP_001684026.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68127094|emb|CAJ04535.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 240
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP L ADGGN+ + +++G V + L+G+C SCPSS T+ GIER+L +
Sbjct: 146 ELLATRIRPMLRADGGNVRFIDMDEGTVFLLLEGSCKSCPSSHITLKSGIERMLMHWIPE 205
Query: 143 AIKDIRQVYDE 153
+ + ++V DE
Sbjct: 206 VV-EAQEVSDE 215
>gi|26324295|dbj|BAC24985.1| unnamed protein product [Mus musculus]
Length = 200
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 10/133 (7%)
Query: 26 TKFNERLQFISIKPK--NSVLQKSGSHETAIRASNPSAP--AGSSPGLYSAHQFDLTAKN 81
TK NE L + +KP +++ S + P P AGSS ++ A
Sbjct: 64 TKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPPPPGEAGSS-----EEDDEVVAMI 118
Query: 82 VDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFG 141
+L+ +RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L+ +
Sbjct: 119 KELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQ-FYI 177
Query: 142 DAIKDIRQVYDEE 154
++ + QV D++
Sbjct: 178 PEVEGVEQVMDDD 190
>gi|452852324|ref|YP_007494008.1| Nitrogen-fixing NifU domain protein [Desulfovibrio piezophilus]
gi|451895978|emb|CCH48857.1| Nitrogen-fixing NifU domain protein [Desulfovibrio piezophilus]
Length = 75
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V VLE VRP L +DGG++++V V + G+V V+L GAC CP S T+ GIER++ +
Sbjct: 4 EKVQAVLEKVRPMLQSDGGDVELVDVTKSGIVQVRLTGACKGCPMSQMTLKNGIERIVLK 63
Query: 139 KFGDA 143
+ +A
Sbjct: 64 EVAEA 68
>gi|348530364|ref|XP_003452681.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Oreochromis niloticus]
Length = 261
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
+RP + DGG++ EDGVV +KLQG+C SCPSS T+ GI+ +L + + ++ +
Sbjct: 191 IRPTVQEDGGDVLYRGFEDGVVKLKLQGSCTSCPSSIVTLKSGIQNML-QFYVPEVESVE 249
Query: 149 QVYDEE 154
QV DEE
Sbjct: 250 QVKDEE 255
>gi|341614410|ref|ZP_08701279.1| hypothetical protein CJLT1_05625 [Citromicrobium sp. JLT1363]
Length = 192
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
D+ + DL+ VRP + DGG+I DGVV + LQGAC CPS+T T+ GIE +
Sbjct: 119 DIVDQIKDLLETRVRPAVAGDGGDIAFRGYRDGVVHLALQGACDGCPSATATLKHGIEGL 178
Query: 136 LKE 138
LK
Sbjct: 179 LKH 181
>gi|383458520|ref|YP_005372509.1| NifU family protein [Corallococcus coralloides DSM 2259]
gi|380733603|gb|AFE09605.1| NifU family protein [Corallococcus coralloides DSM 2259]
Length = 186
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 37/52 (71%)
Query: 87 EDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
E++RP + DGG+I + EDG+V + ++G+C CPSST T+ MGIE L+E
Sbjct: 124 EEIRPAVAQDGGDITLDRFEDGIVYLHMKGSCAGCPSSTATLKMGIEGRLRE 175
>gi|407768119|ref|ZP_11115498.1| putative iron-sulfur cluster scaffold, NifU-like protein
[Thalassospira xiamenensis M-5 = DSM 17429]
gi|407288832|gb|EKF14309.1| putative iron-sulfur cluster scaffold, NifU-like protein
[Thalassospira xiamenensis M-5 = DSM 17429]
Length = 189
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 63 AGSSPGLYSAHQFD--LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGS 120
+G++ G +A D L ++ +L+ VRP + DGG+I EDGVV +++ GAC
Sbjct: 98 SGAATGASTASDGDDELVSQIKELLDTRVRPAVAQDGGDIVFHKFEDGVVFLEMHGACSG 157
Query: 121 CPSSTTTMSMGIERVLK 137
CPSST T+ MGIE +L+
Sbjct: 158 CPSSTATLKMGIENMLR 174
>gi|400600627|gb|EJP68301.1| HIRA-interacting protein [Beauveria bassiana ARSEF 2860]
Length = 328
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFG 141
+L+ +RP + DGG+I+ +DG V++KL+GAC +C SST T+ GIE +L +
Sbjct: 232 ELLETRIRPAIQEDGGDIEFRGFGDDGFVNLKLRGACRTCDSSTVTLKNGIEGMLMH-YI 290
Query: 142 DAIKDIRQVYDEE 154
+ +K +RQ+ DEE
Sbjct: 291 EEVKGVRQILDEE 303
>gi|320032859|gb|EFW14809.1| NifU family protein [Coccidioides posadasii str. Silveira]
Length = 325
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I+ +DG V +KL+GAC +C SST T+ GIE +L + +
Sbjct: 217 ELLETRIRPAIQEDGGDIEFRGFKDGNVMLKLRGACRTCDSSTVTLKNGIESMLMH-YIE 275
Query: 143 AIKDIRQVYDEE 154
+K + QV DEE
Sbjct: 276 EVKSVTQVIDEE 287
>gi|336272067|ref|XP_003350791.1| hypothetical protein SMAC_02461 [Sordaria macrospora k-hell]
gi|380094954|emb|CCC07456.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 290
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I+ EDG+V +KL+GAC +C SST T+ GIE +L + +
Sbjct: 183 ELLETRIRPAIQEDGGDIEFRGFEDGIVKLKLRGACRTCDSSTVTLKNGIEGMLMH-YIE 241
Query: 143 AIKDIRQVYDEE 154
++ + QV D E
Sbjct: 242 EVQGVEQVLDPE 253
>gi|449299220|gb|EMC95234.1| hypothetical protein BAUCODRAFT_35227 [Baudoinia compniacensis UAMH
10762]
Length = 317
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I+ DG V +KL+GAC +C SST T+ GIE +L + +
Sbjct: 210 ELLETRIRPAIQEDGGDIEFRGFHDGQVLLKLRGACRTCDSSTVTLKNGIESMLMH-YIE 268
Query: 143 AIKDIRQVYDEE 154
+K ++QV D+E
Sbjct: 269 EVKGVQQVMDQE 280
>gi|315453542|ref|YP_004073812.1| nifU protein-like protein [Helicobacter felis ATCC 49179]
gi|315132594|emb|CBY83222.1| nifU protein homolog [Helicobacter felis ATCC 49179]
Length = 89
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
K V+ LE VRP L+ DGG++ ++ +++ V V L+GAC C SS T+ GIER L+E+
Sbjct: 10 KPVEKALEKVRPMLLRDGGDVVLLGIKNAKVYVSLEGACKGCASSANTLKFGIERCLQEE 69
>gi|303322791|ref|XP_003071387.1| NifU-like domain containing protein [Coccidioides posadasii C735
delta SOWgp]
gi|240111089|gb|EER29242.1| NifU-like domain containing protein [Coccidioides posadasii C735
delta SOWgp]
Length = 325
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I+ +DG V +KL+GAC +C SST T+ GIE +L + +
Sbjct: 217 ELLETRIRPAIQEDGGDIEFRGFKDGNVMLKLRGACRTCDSSTVTLKNGIESMLM-HYIE 275
Query: 143 AIKDIRQVYDEE 154
+K + QV DEE
Sbjct: 276 EVKSVTQVIDEE 287
>gi|124006329|ref|ZP_01691163.1| NifU domain protein [Microscilla marina ATCC 23134]
gi|123987986|gb|EAY27657.1| NifU domain protein [Microscilla marina ATCC 23134]
Length = 197
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 85 VLED-VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDA 143
+LE+ VRP + +DGG I+ S E+G V V LQG+C CPSS T+ GIE +LK +
Sbjct: 129 ILEEYVRPAVESDGGAINFHSYENGTVKVLLQGSCSGCPSSMVTLKSGIENLLKRMLPED 188
Query: 144 IKDI 147
+K++
Sbjct: 189 VKEV 192
>gi|119189821|ref|XP_001245517.1| hypothetical protein CIMG_04958 [Coccidioides immitis RS]
gi|392868417|gb|EAS34199.2| HIRA-interacting protein 5 [Coccidioides immitis RS]
Length = 325
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I+ +DG V +KL+GAC +C SST T+ GIE +L + +
Sbjct: 217 ELLETRIRPAIQEDGGDIEFRGFKDGNVMLKLRGACRTCDSSTVTLKNGIESMLMH-YIE 275
Query: 143 AIKDIRQVYDEE 154
+K + QV DEE
Sbjct: 276 EVKSVTQVIDEE 287
>gi|392415970|ref|YP_006452575.1| thioredoxin-like protein [Mycobacterium chubuense NBB4]
gi|390615746|gb|AFM16896.1| thioredoxin-like protein [Mycobacterium chubuense NBB4]
Length = 295
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 40/58 (68%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
+ V L+ VRPYL + GG++ ++ V DGVVS++ QG+C SCPSS T+ + ++ ++
Sbjct: 92 QRVSAALDGVRPYLGSHGGDVSLLGVADGVVSLRFQGSCRSCPSSAVTLELAVQDAIR 149
>gi|336468407|gb|EGO56570.1| hypothetical protein NEUTE1DRAFT_32406, partial [Neurospora
tetrasperma FGSC 2508]
gi|350289337|gb|EGZ70562.1| HIRA-interacting protein 5, partial [Neurospora tetrasperma FGSC
2509]
Length = 279
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I+ EDG+V +KL+GAC +C SST T+ GIE +L + +
Sbjct: 172 ELLETRIRPAIQEDGGDIEFRGFEDGIVKLKLRGACRTCDSSTVTLKNGIEGMLM-HYIE 230
Query: 143 AIKDIRQVYDEE 154
++ + QV D E
Sbjct: 231 EVQGVEQVLDPE 242
>gi|410030430|ref|ZP_11280260.1| thioredoxin-like protein [Marinilabilia sp. AK2]
Length = 82
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDG-VVSVKLQGACGSCPSSTTTMSMGIERV 135
L + V+ L +RPYL ADGGN+ VV + D V+ ++L G C SCP ST T+ G+E
Sbjct: 4 LLLEKVEKALNTIRPYLEADGGNVKVVEITDEMVLKLELTGTCSSCPMSTMTLKAGVEEA 63
Query: 136 LKEKFGDAIK 145
+K + +K
Sbjct: 64 IKRDIPEIVK 73
>gi|389751042|gb|EIM92115.1| HIRA-interacting protein 5 [Stereum hirsutum FP-91666 SS1]
Length = 299
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVS-VEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
D A +L+ VRP ++ DGG+I+ +DG+V VKL+G+C C SST T+ GIER
Sbjct: 186 DTVAMIKELLDTRVRPAIMEDGGDIEYRGFTDDGLVQVKLKGSCRGCSSSTVTLKTGIER 245
Query: 135 VLKEKFGDAIKDIRQVYDEE 154
+L + +K + Q+ D+E
Sbjct: 246 MLMHYIPE-VKGVEQILDQE 264
>gi|50292835|ref|XP_448850.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528163|emb|CAG61820.1| unnamed protein product [Candida glabrata]
Length = 263
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Query: 89 VRPYLIADGGNIDVVSV--EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKD 146
+RP ++ DGG+ID E G V +KLQGAC SC SS T+ GIE +LK + D +K+
Sbjct: 166 IRPAILEDGGDIDFRGWDPESGTVYLKLQGACTSCSSSEVTLKYGIESMLKH-YVDEVKE 224
Query: 147 IRQVYDEE 154
+ Q+ D E
Sbjct: 225 VIQMMDPE 232
>gi|367035304|ref|XP_003666934.1| hypothetical protein MYCTH_2097429 [Myceliophthora thermophila ATCC
42464]
gi|347014207|gb|AEO61689.1| hypothetical protein MYCTH_2097429 [Myceliophthora thermophila ATCC
42464]
Length = 336
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ VRP + DGG+I+ E+G V +KL+GAC +C SST T+ GIE +L + +
Sbjct: 229 ELLETRVRPAIQEDGGDIEFRGFENGYVLLKLRGACRTCDSSTVTLKNGIEGMLMH-YIE 287
Query: 143 AIKDIRQVYDEE 154
+K + QV D+E
Sbjct: 288 EVKGVHQVLDQE 299
>gi|453088196|gb|EMF16236.1| HIRA-interacting protein 5 [Mycosphaerella populorum SO2202]
Length = 309
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+ID DG V +KL+GAC +C SST T+ GIE +L + +
Sbjct: 203 ELLETRIRPAIQEDGGDIDFRGFHDGQVLLKLRGACRTCDSSTVTLKNGIESMLMH-YIE 261
Query: 143 AIKDIRQVYDEE 154
+K ++QV D E
Sbjct: 262 EVKGVQQVMDPE 273
>gi|237756555|ref|ZP_04585079.1| putative conserved hypothetical protein [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237691283|gb|EEP60367.1| putative conserved hypothetical protein [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 78
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V+ VLE VRPYL DGG++++V V EDG V V+L GAC C S T+ G+E LK+
Sbjct: 6 QKVEEVLEQVRPYLRFDGGDVELVDVGEDGTVYVRLMGACSGCHMSLWTLKGGVEARLKQ 65
Query: 139 KFGDAIKDIRQV 150
AI ++++V
Sbjct: 66 ----AIPEVKEV 73
>gi|225711844|gb|ACO11768.1| NFU1 iron-sulfur cluster scaffold homolog [Lepeophtheirus salmonis]
Length = 238
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
D A +L+ +RP + DGG+I + +DGVV +K+QG+C SCPSS T+ G++ +
Sbjct: 143 DTVAMIKELLDSRIRPTVQEDGGDIVFMGFDDGVVKLKMQGSCTSCPSSIVTLKNGVQNM 202
Query: 136 LKEKFGDAIKDIRQVYDE 153
L+ + + ++ Q++DE
Sbjct: 203 LQFYIPEVL-EVEQIFDE 219
>gi|451856012|gb|EMD69303.1| hypothetical protein COCSADRAFT_77790 [Cochliobolus sativus ND90Pr]
Length = 311
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ VRP + DGG+I+ DG V +KL+GAC +C SST T+ GIE +L + +
Sbjct: 204 ELLETRVRPAIQEDGGDIEFRGFNDGQVLLKLRGACRTCDSSTVTLKNGIESMLMH-YIE 262
Query: 143 AIKDIRQVYDEE 154
+K ++QV D+E
Sbjct: 263 EVKGVQQVLDQE 274
>gi|82701834|ref|YP_411400.1| nitrogen-fixing NifU-like [Nitrosospira multiformis ATCC 25196]
gi|82409899|gb|ABB74008.1| Nitrogen-fixing NifU-like protein [Nitrosospira multiformis ATCC
25196]
Length = 186
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 40/55 (72%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
+++ E++RPYL +DGG++ V+ +E +SV QGACG+CPSS T GI+ +L+
Sbjct: 121 EMLDEEIRPYLQSDGGDLHVLGLEGNRLSVHYQGACGTCPSSITGTLRGIQNMLR 175
>gi|312113945|ref|YP_004011541.1| Scaffold protein Nfu/NifU [Rhodomicrobium vannielii ATCC 17100]
gi|311219074|gb|ADP70442.1| Scaffold protein Nfu/NifU [Rhodomicrobium vannielii ATCC 17100]
Length = 184
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ VRP + DGG+I DGVV +K+QGAC CPS+T T+ GIE +LK F
Sbjct: 118 ELIETRVRPAVANDGGDITFKGFRDGVVYLKMQGACSGCPSATATLRHGIENLLKH-FVP 176
Query: 143 AIKDIRQV 150
+++++ V
Sbjct: 177 EVQEVQPV 184
>gi|86138949|ref|ZP_01057520.1| nifU domain protein [Roseobacter sp. MED193]
gi|85824180|gb|EAQ44384.1| nifU domain protein [Roseobacter sp. MED193]
Length = 187
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
DL+ VRP + DGG+I + GVV + +QGAC CPSST T+ MGIE +L+
Sbjct: 119 DLLDSRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRH 174
>gi|83943871|ref|ZP_00956328.1| nifU domain protein [Sulfitobacter sp. EE-36]
gi|83953512|ref|ZP_00962234.1| nifU domain protein [Sulfitobacter sp. NAS-14.1]
gi|83842480|gb|EAP81648.1| nifU domain protein [Sulfitobacter sp. NAS-14.1]
gi|83845118|gb|EAP82998.1| nifU domain protein [Sulfitobacter sp. EE-36]
Length = 186
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+L+ VRP + DGG+I E GVV + +QGAC CPSST T+ MGIE +L+
Sbjct: 119 ELLDSRVRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLRH 174
>gi|30249416|ref|NP_841486.1| nitrogen-fixing protein NifU [Nitrosomonas europaea ATCC 19718]
gi|30138779|emb|CAD85356.1| Nitrogen-fixing protein NifU [Nitrosomonas europaea ATCC 19718]
Length = 186
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 40/54 (74%)
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
L+ E+VRP+L DGG++ V+++E ++ + QGACG+CPSS + GIE++L+
Sbjct: 122 LLDEEVRPFLQHDGGDLHVLALEGNILRIHYQGACGTCPSSISGTLRGIEQLLR 175
>gi|358396964|gb|EHK46339.1| hypothetical protein TRIATDRAFT_299034 [Trichoderma atroviride IMI
206040]
Length = 307
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I+ EDG V +KL+GAC +C SST T+ GIE +L + +
Sbjct: 211 ELLETRIRPAIQEDGGDIEFRGFEDGQVMLKLRGACRTCDSSTVTLKNGIEGMLMH-YIE 269
Query: 143 AIKDIRQVYDEE 154
++ + Q+ DEE
Sbjct: 270 EVQGVTQILDEE 281
>gi|322710719|gb|EFZ02293.1| NifU-like protein [Metarhizium anisopliae ARSEF 23]
Length = 297
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 70 YSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMS 129
Y+ + ++ +L+ +RP + DGG+I+ +DG V +KL+GAC +C SST T+
Sbjct: 192 YNENDSEVVGMIKELLETRIRPAIQEDGGDIEFRGFDDGYVKLKLRGACRTCDSSTVTLK 251
Query: 130 MGIERVLKEKFGDAIKDIRQVYDEE 154
GIE +L + + +K + Q+ D+E
Sbjct: 252 NGIEGMLMH-YIEEVKGVHQILDQE 275
>gi|110636788|ref|YP_676995.1| thioredoxin-like protein [Cytophaga hutchinsonii ATCC 33406]
gi|110279469|gb|ABG57655.1| thioredoxin-related protein [Cytophaga hutchinsonii ATCC 33406]
Length = 191
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 82 VDLVLED-VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
+ +VL++ +RP + DGG I+ S DGVV V+LQG+C CPSST T+ GIE +LK
Sbjct: 121 IKVVLDEYIRPAVEQDGGAINFESFVDGVVKVQLQGSCSGCPSSTVTLKSGIENLLK 177
>gi|407772632|ref|ZP_11119934.1| HIRA-interacting protein 5 [Thalassospira profundimaris WP0211]
gi|407284585|gb|EKF10101.1| HIRA-interacting protein 5 [Thalassospira profundimaris WP0211]
Length = 189
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
+L ++ +L+ VRP + DGG+I EDGVV +++ GAC CPSST T+ MGIE +
Sbjct: 113 ELVSQIKELLDTRVRPAVAQDGGDIVFHRFEDGVVFLEMHGACAGCPSSTATLKMGIENM 172
Query: 136 LK 137
L+
Sbjct: 173 LR 174
>gi|420149009|ref|ZP_14656192.1| NifU-like protein [Capnocytophaga sp. oral taxon 335 str. F0486]
gi|394754318|gb|EJF37733.1| NifU-like protein [Capnocytophaga sp. oral taxon 335 str. F0486]
Length = 299
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSV--EDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+++ + V ++ E V+P + +DGGNI +S E V V LQGAC CPSST T+ GIE
Sbjct: 221 EISKQIVAIIDEFVKPAVASDGGNIQFISYNPETHYVEVILQGACSGCPSSTLTLKKGIE 280
Query: 134 RVLKEKFGD 142
+LK+K +
Sbjct: 281 VILKDKLQN 289
>gi|149913250|ref|ZP_01901784.1| NifU-like domain protein [Roseobacter sp. AzwK-3b]
gi|149813656|gb|EDM73482.1| NifU-like domain protein [Roseobacter sp. AzwK-3b]
Length = 187
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 33 QFISIKPK--NSVLQ--KSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVDLVLED 88
++ IKP ++++ +SG A+ A + S A + ++ + +L+
Sbjct: 70 EWDHIKPSILGAIMEHFQSGQPVMAVDAEHASGHAA-----HEGEDSEIVGQIKELLDTR 124
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
VRP + DGG+I E GVV + +QGAC CPSST T+ MGIE +L+
Sbjct: 125 VRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSSTITLKMGIENLLRH 174
>gi|84515908|ref|ZP_01003269.1| nifU domain protein [Loktanella vestfoldensis SKA53]
gi|84510350|gb|EAQ06806.1| nifU domain protein [Loktanella vestfoldensis SKA53]
Length = 187
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%)
Query: 70 YSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMS 129
+S D+ + +L+ VRP + DGG+I + G+V + +QGAC CPSST T+
Sbjct: 106 HSGEDGDIVTQIKELLDTRVRPAVAQDGGDITFHGFDRGIVYLHMQGACAGCPSSTLTLK 165
Query: 130 MGIERVLKEKFGDAIK 145
MGIE +L+ + I+
Sbjct: 166 MGIENLLRHYIPEVIE 181
>gi|6013069|emb|CAB57314.1| HIRA-interacting protein (HIRIP5) [Mus musculus]
gi|17390830|gb|AAH18355.1| NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Mus
musculus]
Length = 199
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 67/131 (51%), Gaps = 7/131 (5%)
Query: 26 TKFNERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVD 83
TK NE L + +KP +++ S + P P + S ++ A +
Sbjct: 64 TKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPPPPGEAG----SEEDDEVVAMIKE 119
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDA 143
L+ +RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L+ +
Sbjct: 120 LLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQ-FYIPE 178
Query: 144 IKDIRQVYDEE 154
++ + QV D++
Sbjct: 179 VEGVEQVMDDD 189
>gi|198470316|ref|XP_002133420.1| GA22888 [Drosophila pseudoobscura pseudoobscura]
gi|263504850|sp|B5DKJ8.1|NFU1_DROPS RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|198145392|gb|EDY72048.1| GA22888 [Drosophila pseudoobscura pseudoobscura]
Length = 286
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
+RP + DGG+I +S E+GVV +K+QG+C SCPSS T+ G++ +L + + ++ +
Sbjct: 190 IRPTVQEDGGDIVFISYENGVVKLKMQGSCSSCPSSIVTLKNGVQNML-QFYIPEVESVE 248
Query: 149 QVYDE 153
QV+D+
Sbjct: 249 QVFDD 253
>gi|168061090|ref|XP_001782524.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666009|gb|EDQ52676.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 212
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 89 VRPYLIADGGNIDVVSV--EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKD 146
+RP + DGG+I+ E G+VS+K+QGAC CPSS T+ GIE +L + +K
Sbjct: 137 IRPAVQDDGGDIEYRGFDPESGIVSLKMQGACSGCPSSAVTLKSGIENMLMHYVSE-VKG 195
Query: 147 IRQVYDEEVRETT 159
+++V+DE+ E T
Sbjct: 196 VQEVHDEDSDEET 208
>gi|150864668|ref|XP_001383601.2| hypothetical protein PICST_82838 [Scheffersomyces stipitis CBS
6054]
gi|149385924|gb|ABN65572.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 254
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 4/80 (5%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSV--EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
+L+ +RP + DGG+I+ VS EDG V ++L+GAC SC SS+ T+ GIE +LK +
Sbjct: 152 ELIFTRIRPAIQDDGGDIEFVSFREEDGTVFLRLKGACRSCDSSSVTLKNGIESMLK-YY 210
Query: 141 GDAIKDIRQVYDEEVRETTV 160
+ +K + QV DEE E V
Sbjct: 211 IEEVKAVEQV-DEEDPEVVV 229
>gi|145228927|ref|XP_001388772.1| nifU-related protein [Aspergillus niger CBS 513.88]
gi|134054866|emb|CAK36880.1| unnamed protein product [Aspergillus niger]
gi|350637974|gb|EHA26330.1| hypothetical protein ASPNIDRAFT_206214 [Aspergillus niger ATCC
1015]
Length = 330
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I+ E+G+V +KL+GAC +C SST T+ GIE +L + +
Sbjct: 223 ELLDTRIRPAIQEDGGDIEFRGFENGIVLLKLRGACRTCDSSTVTLRNGIESMLMH-YIE 281
Query: 143 AIKDIRQVYDEE 154
++ + QV D+E
Sbjct: 282 EVQGVEQVLDQE 293
>gi|452003502|gb|EMD95959.1| hypothetical protein COCHEDRAFT_1191111 [Cochliobolus
heterostrophus C5]
Length = 311
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ VRP + DGG+I+ DG V +KL+GAC +C SST T+ GIE +L + +
Sbjct: 204 ELLETRVRPAIQEDGGDIEFRGFNDGQVLLKLRGACRTCDSSTVTLKNGIESMLMH-YIE 262
Query: 143 AIKDIRQVYDEE 154
+K ++QV D+E
Sbjct: 263 EVKGVQQVLDQE 274
>gi|392597012|gb|EIW86334.1| HIRA-interacting protein 5 [Coniophora puteana RWD-64-598 SS2]
Length = 222
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 89 VRPYLIADGGNIDV--VSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKD 146
VRP ++ DGG+I+ + EDG+V VKL+G+C C SS T+ GIER+L + +K
Sbjct: 133 VRPSIMEDGGDIEYRGFTEEDGIVKVKLKGSCRGCDSSAVTLKSGIERMLM-HYVPEVKG 191
Query: 147 IRQVYDEE 154
+ Q+ DEE
Sbjct: 192 VEQILDEE 199
>gi|290967833|ref|ZP_06559386.1| NifU-like protein [Megasphaera genomosp. type_1 str. 28L]
gi|290782192|gb|EFD94767.1| NifU-like protein [Megasphaera genomosp. type_1 str. 28L]
Length = 94
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDA 143
L+ E +RP L A GGN++++S DG++ ++L G C CPS+T T I ++++ F D
Sbjct: 10 LLAEKIRPSLQAHGGNVEIISYTDGILRIRLTGRCSGCPSATLTTEEFINQIVQTAFPD- 68
Query: 144 IKDIR 148
++++R
Sbjct: 69 VREVR 73
>gi|355575830|ref|ZP_09045203.1| hypothetical protein HMPREF1008_01180 [Olsenella sp. oral taxon 809
str. F0356]
gi|354817046|gb|EHF01556.1| hypothetical protein HMPREF1008_01180 [Olsenella sp. oral taxon 809
str. F0356]
Length = 85
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 82 VDLVLEDVRPYLIADGGNIDVVSVED-GVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
+D L +R L ADGG++ +V+V+D GVV++++QGAC CP S+ MS GIER+LKE
Sbjct: 14 LDATLGVIRQSLQADGGDVVLVNVDDEGVVTLEMQGACAGCPLSSYDMSEGIERILKEHV 73
>gi|374287997|ref|YP_005035082.1| putative nitrogen fixation-related protein [Bacteriovorax marinus
SJ]
gi|301166538|emb|CBW26114.1| putative nitrogen fixation-related protein [Bacteriovorax marinus
SJ]
Length = 184
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 80 KNVDLVLED-VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
K ++ +L+ +RP L DGG+I +S ED ++ V+ QGACG+CPSSTT I+ +L++
Sbjct: 111 KEIEAILDKTIRPGLQGDGGDIQTISFEDNILLVQYQGACGTCPSSTTGTLEAIKAILRD 170
Query: 139 KFGDAI 144
++ I
Sbjct: 171 EYNPDI 176
>gi|188996345|ref|YP_001930596.1| nitrogen-fixing NifU domain-containing protein
[Sulfurihydrogenibium sp. YO3AOP1]
gi|188931412|gb|ACD66042.1| nitrogen-fixing NifU domain protein [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 79
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V+ VLE VRPYL DGG++++V V EDG V V+L GAC C S T+ G+E LK+
Sbjct: 6 QKVEEVLEQVRPYLRFDGGDVELVDVGEDGTVYVRLMGACSGCHMSLWTLKGGVETRLKQ 65
Query: 139 KFGDAIKDIRQV 150
AI ++++V
Sbjct: 66 ----AIPEVKEV 73
>gi|358372104|dbj|GAA88709.1| NifU-related protein [Aspergillus kawachii IFO 4308]
Length = 330
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I+ E+G+V +KL+GAC +C SST T+ GIE +L + +
Sbjct: 223 ELLDTRIRPAIQEDGGDIEFRGFENGIVLLKLRGACRTCDSSTVTLRNGIESMLMH-YIE 281
Query: 143 AIKDIRQVYDEE 154
++ + QV D+E
Sbjct: 282 EVQGVEQVLDQE 293
>gi|254797154|ref|YP_003081992.1| hira-interacting protein 5 [Neorickettsia risticii str. Illinois]
gi|254590399|gb|ACT69761.1| hira-interacting protein 5 [Neorickettsia risticii str. Illinois]
Length = 180
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
VRP +I DGGN+ +DG+V +KLQGAC CPS++ T+ GIE +L + + +++++
Sbjct: 120 VRPSVIEDGGNVVFKGYKDGIVYLKLQGACAGCPSASVTLKDGIENLL-QYYVPEVREVQ 178
Query: 149 QV 150
QV
Sbjct: 179 QV 180
>gi|116199405|ref|XP_001225514.1| hypothetical protein CHGG_07858 [Chaetomium globosum CBS 148.51]
gi|88179137|gb|EAQ86605.1| hypothetical protein CHGG_07858 [Chaetomium globosum CBS 148.51]
Length = 337
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ VRP + DGG+I+ E+G V +KL+GAC +C SST T+ GIE +L + +
Sbjct: 230 ELLETRVRPAIQEDGGDIEFRGFENGYVMLKLRGACRTCDSSTVTLKNGIEGMLMH-YIE 288
Query: 143 AIKDIRQVYDEE 154
++ + QV D+E
Sbjct: 289 EVQGVHQVLDQE 300
>gi|109948219|ref|YP_665447.1| hypothetical protein Hac_1752 [Helicobacter acinonychis str.
Sheeba]
gi|109715440|emb|CAK00448.1| conserved hypothetical protein [Helicobacter acinonychis str.
Sheeba]
Length = 89
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 39/58 (67%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
K V + +E +RPYL+ DGGNI+V+ ++ + V L+GAC +C SS T+ IER LK
Sbjct: 11 KPVHIAIEKIRPYLLKDGGNIEVLGIKSMKIYVTLEGACKTCSSSKITLKNVIERQLK 68
>gi|254465238|ref|ZP_05078649.1| NifU domain protein [Rhodobacterales bacterium Y4I]
gi|206686146|gb|EDZ46628.1| NifU domain protein [Rhodobacterales bacterium Y4I]
Length = 188
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 30 ERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVDLVLE 87
E + + IKP +V++ S + + ++ SA S +S ++ + +L+
Sbjct: 67 EGIDWDHIKPAILGAVMEHYQSGQPVM--ADGSADPASGHAEHSGEDAEIVNQIKELLDS 124
Query: 88 DVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
VRP + DGG+I + GVV + +QGAC CPSST T+ MGIE +L+
Sbjct: 125 RVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRH 175
>gi|436840248|ref|YP_007324626.1| Nitrogen-fixing NifU domain protein [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
gi|432169154|emb|CCO22520.1| Nitrogen-fixing NifU domain protein [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
Length = 74
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 82 VDLVLEDVRPYLIADGGNIDVVSVED-GVVSVKLQGACGSCPSSTTTMSMGIERVL 136
V+ L+ VRP L ADGGN+++V V D G+ V++QGAC CP S T+ IER L
Sbjct: 5 VEAALDKVRPLLQADGGNVELVEVTDNGIAKVRMQGACKGCPMSQITLRNAIERTL 60
>gi|335049952|ref|ZP_08542933.1| NifU-like protein [Megasphaera sp. UPII 199-6]
gi|333761859|gb|EGL39385.1| NifU-like protein [Megasphaera sp. UPII 199-6]
Length = 94
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDA 143
L+ E +RP L A GGN++++S DG++ ++L G C CPS+T T I ++++ F D
Sbjct: 10 LLAEKIRPSLQAHGGNVEIISYTDGILRIRLTGRCSGCPSATLTTEEFINQIVQTAFPD- 68
Query: 144 IKDIR 148
++++R
Sbjct: 69 VREVR 73
>gi|449018494|dbj|BAM81896.1| similar to iron-sulfur cluster scaffold protein [Cyanidioschyzon
merolae strain 10D]
Length = 597
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 74 QFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQ--GACGSCPSSTTTMSMG 131
+ L+ V+ L +VRP L DGG++ VVSV+ +V+LQ GAC SCP+ T+ G
Sbjct: 434 RLPLSVTTVEAALSEVRPLLQKDGGDVQVVSVDPENATVRLQFLGACASCPALEDTVRFG 493
Query: 132 IERVLKEKFGD 142
+E L++ FG+
Sbjct: 494 VEIALRKYFGE 504
>gi|426335854|ref|XP_004029421.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
[Gorilla gorilla gorilla]
Length = 213
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
+RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L + + ++ +
Sbjct: 140 IRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNML-QFYIPEVEGVE 198
Query: 149 QVYDEEVRE 157
QV D+E E
Sbjct: 199 QVMDDESDE 207
>gi|322696539|gb|EFY88330.1| NifU-like protein [Metarhizium acridum CQMa 102]
Length = 297
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 70 YSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMS 129
Y+ + ++ +L+ +RP + DGG+I+ +DG V +KL+GAC +C SST T+
Sbjct: 192 YNENDSEVVGMIKELLETRIRPAIQEDGGDIEYRGFDDGYVKLKLRGACRTCDSSTVTLK 251
Query: 130 MGIERVLKEKFGDAIKDIRQVYDEE 154
GIE +L + + +K + Q+ D+E
Sbjct: 252 NGIEGMLMH-YIEEVKGVHQILDQE 275
>gi|163744246|ref|ZP_02151606.1| NifU-like domain protein [Oceanibulbus indolifex HEL-45]
gi|161381064|gb|EDQ05473.1| NifU-like domain protein [Oceanibulbus indolifex HEL-45]
Length = 186
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 33/50 (66%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
VRP + DGG+I E GVV + +QGAC CPSST T+ MGIE +L+
Sbjct: 125 VRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLRH 174
>gi|195132295|ref|XP_002010579.1| GI14603 [Drosophila mojavensis]
gi|193909029|gb|EDW07896.1| GI14603 [Drosophila mojavensis]
Length = 259
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
+RP + DGG+I + E+GVV +K+QG+C SCPSS T+ G++ +L + + ++ +
Sbjct: 163 IRPTVQEDGGDIVFMGYENGVVKLKMQGSCSSCPSSIVTLKNGVQNML-QFYIPEVESVE 221
Query: 149 QVYDE 153
QV+DE
Sbjct: 222 QVFDE 226
>gi|428309608|ref|YP_007120585.1| Modular FeS cluster scaffolding protein NifU [Microcoleus sp. PCC
7113]
gi|428251220|gb|AFZ17179.1| Modular FeS cluster scaffolding protein NifU [Microcoleus sp. PCC
7113]
Length = 300
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 47 SGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVE 106
+ E ++R ++ A A + L + + L + ++ E+V+P L DGG++++ VE
Sbjct: 201 AAEREMSVRVASDLATAKAQGPLTTVQKIALIQQVIN---EEVKPVLALDGGDVELFDVE 257
Query: 107 DGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
V V+L+GACGSC SST T+ + IE L+E+
Sbjct: 258 GDRVLVQLKGACGSCSSSTATLKIAIEARLQER 290
>gi|398411907|ref|XP_003857287.1| hypothetical protein MYCGRDRAFT_107316 [Zymoseptoria tritici
IPO323]
gi|339477172|gb|EGP92263.1| hypothetical protein MYCGRDRAFT_107316 [Zymoseptoria tritici
IPO323]
Length = 317
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I+ DG V +KL+GAC +C SST T+ GIE +L + +
Sbjct: 218 ELLDTRIRPAIQEDGGDIEFRGFHDGQVMLKLRGACRTCDSSTVTLKNGIESMLMH-YIE 276
Query: 143 AIKDIRQVYDEE 154
+K ++QV D+E
Sbjct: 277 EVKGVQQVLDQE 288
>gi|299755866|ref|XP_001828936.2| NifU-like protein c [Coprinopsis cinerea okayama7#130]
gi|298411416|gb|EAU92943.2| NifU-like protein c [Coprinopsis cinerea okayama7#130]
Length = 291
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVE--DGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
+L+ VRP ++ DGG+I+ + DG+V VKL+G+C C SS+ T+ GIER+L +
Sbjct: 187 ELLETRVRPAIMEDGGDIEYRGFDENDGIVRVKLKGSCRGCESSSVTLKSGIERMLMH-Y 245
Query: 141 GDAIKDIRQVYDEE 154
+K + Q+ DEE
Sbjct: 246 VPEVKGVEQILDEE 259
>gi|296282499|ref|ZP_06860497.1| hypothetical protein CbatJ_02705 [Citromicrobium bathyomarinum
JL354]
Length = 192
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
D+ + +L+ +RP + DGG+I DGVV ++LQGAC CPSST T+ GIE +
Sbjct: 119 DIVDQIKELLETRIRPAVAGDGGDIAYRGYRDGVVHLQLQGACDGCPSSTATLKHGIEGL 178
Query: 136 LK 137
LK
Sbjct: 179 LK 180
>gi|351708084|gb|EHB11003.1| NFU1 iron-sulfur cluster scaffold-like protein, mitochondrial
[Heterocephalus glaber]
Length = 229
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
+RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L + + ++ +
Sbjct: 156 IRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNML-QFYIPEVEGVE 214
Query: 149 QVYDEEVRE 157
QV D+E E
Sbjct: 215 QVMDDESDE 223
>gi|345776689|ref|XP_855433.2| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
[Canis lupus familiaris]
Length = 252
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
+RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L + + ++ +
Sbjct: 179 IRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNML-QFYIPEVEGVE 237
Query: 149 QVYDEEVRE 157
QV D+E E
Sbjct: 238 QVMDDESDE 246
>gi|410954971|ref|XP_003984132.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 1 [Felis catus]
Length = 253
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
+RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L + + ++ +
Sbjct: 180 IRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSMITLKNGIQNML-QFYIPEVEGVE 238
Query: 149 QVYDEEVRE 157
QV D+E E
Sbjct: 239 QVMDDESDE 247
>gi|339504557|ref|YP_004691977.1| NifU-like protein [Roseobacter litoralis Och 149]
gi|338758550|gb|AEI95014.1| NifU-like protein [Roseobacter litoralis Och 149]
Length = 187
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 33/50 (66%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
VRP + DGG+I E GVV + +QGAC CPSST T+ MGIE +L+
Sbjct: 125 VRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLRH 174
>gi|110678955|ref|YP_681962.1| NifU-like domain-containing protein [Roseobacter denitrificans OCh
114]
gi|109455071|gb|ABG31276.1| NifU-like domain protein [Roseobacter denitrificans OCh 114]
Length = 187
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 33/50 (66%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
VRP + DGG+I E GVV + +QGAC CPSST T+ MGIE +L+
Sbjct: 125 VRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLRH 174
>gi|334141422|ref|YP_004534628.1| nitrogen-fixing NifU-like [Novosphingobium sp. PP1Y]
gi|333939452|emb|CCA92810.1| nitrogen-fixing NifU-like [Novosphingobium sp. PP1Y]
Length = 192
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 39/63 (61%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
D+ A+ DL+ VRP + DGG+I +GVV + +QGAC CPSST T+ GIE +
Sbjct: 119 DIVAQIKDLIETRVRPAVANDGGDIIYRGYREGVVYLAMQGACSGCPSSTATLKHGIESL 178
Query: 136 LKE 138
LK
Sbjct: 179 LKH 181
>gi|332664007|ref|YP_004446795.1| nitrogen-fixing NifU domain-containing protein [Haliscomenobacter
hydrossis DSM 1100]
gi|332332821|gb|AEE49922.1| nitrogen-fixing NifU domain-containing protein [Haliscomenobacter
hydrossis DSM 1100]
Length = 212
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 70 YSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMS 129
Y+ + +L K +L+ V+P + DGGNI+ E+G V V +QG+C CPSST T+
Sbjct: 131 YTGDEAELVQKIKELIDTYVKPAVEMDGGNIEFKHYENGKVFVLMQGSCSGCPSSTVTLK 190
Query: 130 MGIERVLK 137
GIE +LK
Sbjct: 191 AGIEGMLK 198
>gi|260951229|ref|XP_002619911.1| hypothetical protein CLUG_01070 [Clavispora lusitaniae ATCC 42720]
gi|238847483|gb|EEQ36947.1| hypothetical protein CLUG_01070 [Clavispora lusitaniae ATCC 42720]
Length = 243
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 55/81 (67%), Gaps = 4/81 (4%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVED--GVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
+L+ +RP + DGG+I+ VS E+ GVV ++L+GAC SC SS+ T+ GIE +LK +
Sbjct: 142 ELIFTRIRPAIQDDGGDIEFVSFEENTGVVYLRLKGACRSCDSSSVTLKNGIESMLK-YY 200
Query: 141 GDAIKDIRQVYDEE-VRETTV 160
+ ++++R V + + + ETTV
Sbjct: 201 IEEVQEVRPVDETDPIEETTV 221
>gi|426201635|gb|EKV51558.1| hypothetical protein AGABI2DRAFT_133221 [Agaricus bisporus var.
bisporus H97]
Length = 221
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIER 134
D A +L+ VRP ++ DGG+I+ EDGVV +KL+G+C C SST T+ GIER
Sbjct: 115 DTVAMIKELLETRVRPAIMEDGGDIEFRGFDEDGVVKLKLKGSCRGCSSSTVTLKSGIER 174
Query: 135 VLKEKFGDAIKDIRQVYDEE 154
+L + +K +++V D+E
Sbjct: 175 MLTHYIPE-VKSVQEVLDQE 193
>gi|149727512|ref|XP_001491099.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like isoform 1 [Equus caballus]
Length = 253
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
+RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L + + ++ +
Sbjct: 180 IRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNML-QFYIPEVEGVE 238
Query: 149 QVYDEEVRE 157
QV D+E E
Sbjct: 239 QVMDDESDE 247
>gi|85705721|ref|ZP_01036818.1| nifU domain protein [Roseovarius sp. 217]
gi|85669711|gb|EAQ24575.1| nifU domain protein [Roseovarius sp. 217]
Length = 187
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 11/137 (8%)
Query: 9 ATRISKTPTISSKSQFPTKF-----NERLQFISIKPK--NSVLQKSGSHETAIRASNPSA 61
A RI + P +S F F E ++ IKP ++++ S + + A
Sbjct: 42 AERIFRVPGVSGVF-FGNDFVTVTKGEATEWDHIKPAILGAIMEHYQSGQPVMLGEGGGA 100
Query: 62 PAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSC 121
S +S ++ + +L+ VRP + DGG+I + GVV + +QGAC C
Sbjct: 101 ---SGHAEHSGEDSEIVNQIKELLDTRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGC 157
Query: 122 PSSTTTMSMGIERVLKE 138
PSST T+ MGIE +L+
Sbjct: 158 PSSTITLKMGIENLLRH 174
>gi|403530888|ref|YP_006665417.1| hypothetical protein RM11_0996 [Bartonella quintana RM-11]
gi|403232959|gb|AFR26702.1| hypothetical protein RM11_0996 [Bartonella quintana RM-11]
Length = 184
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%)
Query: 69 LYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTM 128
Y D+ + +L+ VRP + DGG+I E+G+V + ++GAC CPSST T+
Sbjct: 110 FYDEKDVDIVSTIKELLETRVRPAVANDGGDITFCGFENGIVYLNMRGACAGCPSSTATL 169
Query: 129 SMGIERVLKE 138
GIE +L+
Sbjct: 170 KTGIENLLRH 179
>gi|363580245|ref|ZP_09313055.1| Nitrogen-fixing NifU-like protein [Flavobacteriaceae bacterium
HQM9]
Length = 79
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 48/69 (69%), Gaps = 2/69 (2%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGV-VSVKLQGACGSCPSSTTTMSMGIERVLKE 138
KNV+ LE++RP+L +DGG+I +V +E+G V V+LQGAC +C + T+ G+E +K
Sbjct: 8 KNVEKALEEIRPFLKSDGGDIRLVDIEEGKRVKVELQGACVACNVNQMTLRSGVEMTIK- 66
Query: 139 KFGDAIKDI 147
K+ I+++
Sbjct: 67 KYAPQIEEV 75
>gi|294678745|ref|YP_003579360.1| NifU domain-containing protein [Rhodobacter capsulatus SB 1003]
gi|294477565|gb|ADE86953.1| NifU domain protein [Rhodobacter capsulatus SB 1003]
Length = 188
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ VRP + DGG+I E GVV + +QGAC CPSST T+ MGIE +L+ +
Sbjct: 120 ELLDTRVRPAVARDGGDITFHGFEKGVVYLHMQGACAGCPSSTYTLKMGIENLLRHYIPE 179
Query: 143 AIKDIRQV 150
+ ++R V
Sbjct: 180 -VSEVRAV 186
>gi|393779593|ref|ZP_10367831.1| NifU-like protein [Capnocytophaga sp. oral taxon 412 str. F0487]
gi|392609913|gb|EIW92708.1| NifU-like protein [Capnocytophaga sp. oral taxon 412 str. F0487]
Length = 299
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSV--EDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+++ + V ++ E V+P + +DGGNI +S E V V LQGAC CPSST T+ GIE
Sbjct: 221 EVSKQIVAIIDEFVKPAVASDGGNIQFISYNPETHYVEVILQGACSGCPSSTLTLKKGIE 280
Query: 134 RVLKEKFGD 142
+LK+K +
Sbjct: 281 VILKDKLQN 289
>gi|148284929|ref|YP_001249019.1| hypothetical protein OTBS_1710 [Orientia tsutsugamushi str.
Boryong]
gi|189184851|ref|YP_001938636.1| thioredoxin-like protein [Orientia tsutsugamushi str. Ikeda]
gi|146740368|emb|CAM80805.1| conserved hypothetical protein [Orientia tsutsugamushi str.
Boryong]
gi|189181622|dbj|BAG41402.1| thioredoxin-like protein [Orientia tsutsugamushi str. Ikeda]
Length = 182
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
VRP + DGG+I+ S +DG+V ++++GAC CPSST T+ GIE +LK
Sbjct: 122 VRPAVAMDGGDIEYHSFKDGIVKLQMRGACVGCPSSTMTLKQGIESLLK 170
>gi|429851681|gb|ELA26859.1| NifU-like protein [Colletotrichum gloeosporioides Nara gc5]
Length = 312
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVED-GVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFG 141
+L+ +RP + DGG+ID D GVV +KL+GAC +C SST T+ GIE +L +
Sbjct: 216 ELLETRIRPAIQEDGGDIDFRGFTDEGVVLLKLRGACRTCDSSTATLKNGIESMLMH-YI 274
Query: 142 DAIKDIRQVYDEE 154
+ +K + Q+ DEE
Sbjct: 275 EEVKGVEQIMDEE 287
>gi|336172539|ref|YP_004579677.1| nitrogen-fixing NifU domain-containing protein [Lacinutrix sp.
5H-3-7-4]
gi|334727111|gb|AEH01249.1| nitrogen-fixing NifU domain-containing protein [Lacinutrix sp.
5H-3-7-4]
Length = 300
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Query: 54 IRASNPSAPAGSSPGLYSAH--QFDLTAKNVDLVLED-VRPYLIADGGNIDVVSVEDGVV 110
I A+ P A S+ + AH D T+K + +LE+ V+P + +DGGNI S
Sbjct: 198 ISANAPEAIEKSTKNV-DAHFETLDDTSKEIVNILEEYVKPAVASDGGNIQFESYNADTK 256
Query: 111 SVK--LQGACGSCPSSTTTMSMGIERVLKE 138
+VK LQGAC CPSST T+ GIE +LKE
Sbjct: 257 TVKVILQGACSGCPSSTFTLKNGIENMLKE 286
>gi|296421235|ref|XP_002840171.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636384|emb|CAZ84362.1| unnamed protein product [Tuber melanosporum]
Length = 279
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I+ E+GVV +KL+GAC +C SST T+ GIE +L + +
Sbjct: 167 ELLETRIRPAIQEDGGDIEYRGFENGVVKLKLRGACRTCDSSTVTLKNGIESMLMH-YIE 225
Query: 143 AIKDIRQVYDEE 154
++ ++Q+ D E
Sbjct: 226 EVQSVQQIMDPE 237
>gi|409083312|gb|EKM83669.1| hypothetical protein AGABI1DRAFT_81428 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 221
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIER 134
D A +L+ VRP ++ DGG+I+ EDGVV +KL+G+C C SST T+ GIER
Sbjct: 115 DTVAMIKELLETRVRPAIMEDGGDIEFRGFDEDGVVKLKLKGSCRGCSSSTVTLKSGIER 174
Query: 135 VLKEKFGDAIKDIRQVYDEE 154
+L + +K +++V D+E
Sbjct: 175 MLTHYIPE-VKSVQEVLDQE 193
>gi|344283678|ref|XP_003413598.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Loxodonta africana]
Length = 312
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
+RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L + + ++ +
Sbjct: 239 IRPTVQEDGGDVIFKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNML-QFYIPEVEGVE 297
Query: 149 QVYDEEVRE 157
QV D++ E
Sbjct: 298 QVMDDDSEE 306
>gi|49474596|ref|YP_032638.1| hypothetical protein BQ10720 [Bartonella quintana str. Toulouse]
gi|49240100|emb|CAF26539.1| hypothetical protein BQ10720 [Bartonella quintana str. Toulouse]
Length = 192
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%)
Query: 69 LYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTM 128
Y D+ + +L+ VRP + DGG+I E+G+V + ++GAC CPSST T+
Sbjct: 110 FYDEKDVDIVSTIKELLETRVRPAVANDGGDITFCGFENGIVYLNMRGACAGCPSSTATL 169
Query: 129 SMGIERVLKE 138
GIE +L+
Sbjct: 170 KTGIENLLRH 179
>gi|407835010|gb|EKF99103.1| hypothetical protein TCSYLVIO_009988 [Trypanosoma cruzi]
Length = 261
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 5/77 (6%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVED--GVVSVKLQGACGSCPSSTTTMSMGIERVLKE-- 138
+L+ E VRP + DGG++ +++ D GVVS+ + GAC +CPSS+ T+ GIERV+K
Sbjct: 138 ELLREQVRPMVQRDGGDVKLLNFNDETGVVSLAMLGACRTCPSSSNTLKDGIERVMKHFL 197
Query: 139 -KFGDAIKDIRQVYDEE 154
+ + ++D + EE
Sbjct: 198 PEVTEVVEDKGHAFYEE 214
>gi|87199010|ref|YP_496267.1| nitrogen-fixing NifU-like [Novosphingobium aromaticivorans DSM
12444]
gi|87134691|gb|ABD25433.1| nitrogen-fixing NifU-like protein [Novosphingobium aromaticivorans
DSM 12444]
Length = 195
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
DL+ VRP + DGG+I +GVV +K+QGAC CPSST T+ GIE +LK
Sbjct: 129 DLIETRVRPAVANDGGDIIYRGFREGVVYLKMQGACSGCPSSTATLKNGIESLLKH 184
>gi|315223924|ref|ZP_07865769.1| nitrogen-fixing NifU domain protein [Capnocytophaga ochracea F0287]
gi|420158773|ref|ZP_14665587.1| NifU-like protein [Capnocytophaga ochracea str. Holt 25]
gi|314946096|gb|EFS98100.1| nitrogen-fixing NifU domain protein [Capnocytophaga ochracea F0287]
gi|394763260|gb|EJF45380.1| NifU-like protein [Capnocytophaga ochracea str. Holt 25]
Length = 299
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSV--EDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+++ + V ++ E V+P + +DGGNI +S E V V LQGAC CPSST T+ GIE
Sbjct: 221 EVSKQIVAIIDEFVKPAVASDGGNIQFISYNPETHYVEVILQGACSGCPSSTLTLKKGIE 280
Query: 134 RVLKEKFGD 142
+LK+K +
Sbjct: 281 VILKDKLQN 289
>gi|429746393|ref|ZP_19279746.1| NifU-like protein [Capnocytophaga sp. oral taxon 380 str. F0488]
gi|429166342|gb|EKY08332.1| NifU-like protein [Capnocytophaga sp. oral taxon 380 str. F0488]
Length = 299
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSV--EDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+++ + V ++ E V+P + +DGGNI +S E V V LQGAC CPSST T+ GIE
Sbjct: 221 EVSKQIVAIIDEFVKPAVASDGGNIQFISYNPETHYVEVILQGACSGCPSSTLTLKKGIE 280
Query: 134 RVLKEKFGD 142
+LK+K +
Sbjct: 281 VILKDKLQN 289
>gi|260426420|ref|ZP_05780399.1| scaffold protein Nfu/NifU [Citreicella sp. SE45]
gi|260420912|gb|EEX14163.1| scaffold protein Nfu/NifU [Citreicella sp. SE45]
Length = 185
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 62 PAGSSPGLYSAHQ-FDLTAKNV-----DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQ 115
P + G S H FD K + +L+ VRP + DGG+I E GVV + +Q
Sbjct: 91 PVMAGEGGSSGHAAFDGEDKEIVGQIKELLDSRVRPAVAQDGGDITFHGFERGVVYLHMQ 150
Query: 116 GACGSCPSSTTTMSMGIERVLKE 138
GAC CPSST T+ MGIE +L+
Sbjct: 151 GACAGCPSSTLTLKMGIENLLRH 173
>gi|431912616|gb|ELK14634.1| NFU1 iron-sulfur cluster scaffold like protein, mitochondrial
[Pteropus alecto]
Length = 318
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
+RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L + + ++ +
Sbjct: 245 IRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNML-QFYIPEVEGVE 303
Query: 149 QVYDEEVRE 157
QV D+E E
Sbjct: 304 QVTDDEPDE 312
>gi|378733030|gb|EHY59489.1| thioredoxin-like protein [Exophiala dermatitidis NIH/UT8656]
Length = 315
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 52 TAIRASNPSAPAGSSPGLYSAHQFD--LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGV 109
T +A+ G P +A+ D + A +L+ +RP + DGG+I+ DG
Sbjct: 175 TVDKATASEGQEGGGPDSLAANDDDDEVVAMIKELLETRIRPAIQEDGGDIEFRGFHDGQ 234
Query: 110 VSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIRQVYDEE 154
V +KL+GAC +C SST T+ GIE +L + + +K + QV DEE
Sbjct: 235 VLLKLRGACRTCDSSTVTLKNGIESMLMH-YIEEVKGVTQVMDEE 278
>gi|118403546|ref|NP_001072356.1| NFU1 iron-sulfur cluster scaffold homolog [Xenopus (Silurana)
tropicalis]
gi|111307911|gb|AAI21453.1| HIRA interacting protein 5 [Xenopus (Silurana) tropicalis]
Length = 199
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 71/139 (51%), Gaps = 8/139 (5%)
Query: 26 TKFNERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVD 83
TK +E L + IKP +++ S + P A +S + ++ A +
Sbjct: 64 TKNSEELDWNLIKPDIYATIMDFFASGLPVVTEDAPRGDAAAS-----EEEDEVVAMIKE 118
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDA 143
L+ +RP + DGG++ +DG+V +KLQG+C SCPSS T+ GI+ +L+ +
Sbjct: 119 LLDTRIRPTVQEDGGDVLYKGFQDGIVQLKLQGSCTSCPSSIITLKSGIQNMLQ-FYIPE 177
Query: 144 IKDIRQVYDEEVRETTVEV 162
++ + QV DE+ + E+
Sbjct: 178 VEGVEQVTDEDEEDAGTEI 196
>gi|429756073|ref|ZP_19288686.1| NifU-like protein [Capnocytophaga sp. oral taxon 324 str. F0483]
gi|429172094|gb|EKY13675.1| NifU-like protein [Capnocytophaga sp. oral taxon 324 str. F0483]
Length = 299
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSV--EDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+++ + V ++ E V+P + +DGGNI +S E V V LQGAC CPSST T+ GIE
Sbjct: 221 EVSKQIVAIIDEFVKPAVASDGGNIQFISYNPETHYVEVILQGACSGCPSSTLTLKKGIE 280
Query: 134 RVLKEKFGD 142
+LK+K +
Sbjct: 281 VILKDKLQN 289
>gi|428204101|ref|YP_007082690.1| Fe-S cluster assembly protein NifU [Pleurocapsa sp. PCC 7327]
gi|427981533|gb|AFY79133.1| Fe-S cluster assembly protein NifU [Pleurocapsa sp. PCC 7327]
Length = 298
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 7/103 (6%)
Query: 41 NSVLQKSGSHETAIRASNPSAP----AGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIAD 96
+ +L + I AS +P A +S L + + L + +D ++VRP+L D
Sbjct: 188 DDLLAEVNEQTQQIEASFTRSPSLSKASASVPLTNLQKISLIQEILD---KEVRPFLATD 244
Query: 97 GGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
GG++++ VE V V L+GAC CPS T T+ MGIE L+E+
Sbjct: 245 GGDVELYDVEGNRVLVMLKGACDGCPSVTATLKMGIEAKLQER 287
>gi|395216626|ref|ZP_10401427.1| nitrogen-fixing NifU domain-containing protein [Pontibacter sp.
BAB1700]
gi|394455289|gb|EJF09780.1| nitrogen-fixing NifU domain-containing protein [Pontibacter sp.
BAB1700]
Length = 88
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 7/67 (10%)
Query: 86 LEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIER-VLKEKFGDA 143
L+ +RPYL ADGGN+ V+ V +D + ++L GACG+CP ST T+ G+E+ VLK A
Sbjct: 18 LDQIRPYLEADGGNVKVLEVTDDMTLKLELLGACGTCPMSTMTLKAGVEQSVLK-----A 72
Query: 144 IKDIRQV 150
I +I+ V
Sbjct: 73 IPEIKAV 79
>gi|312384995|gb|EFR29592.1| hypothetical protein AND_01304 [Anopheles darlingi]
Length = 214
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
+RP + DGG+I + +DGVV +K+QG+C SCPSS T+ G++ +L+ + + +
Sbjct: 124 IRPTVQEDGGDIIFMGFDDGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEVVS-VE 182
Query: 149 QVYDEEVRETTVEVSAL 165
QV DE + E S L
Sbjct: 183 QVTDEVDKMAETEFSKL 199
>gi|123976981|ref|XP_001314690.1| NifU-like domain containing protein [Trichomonas vaginalis G3]
gi|121897307|gb|EAY02432.1| NifU-like domain containing protein [Trichomonas vaginalis G3]
Length = 103
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 87 EDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD-AIK 145
E VRP L DGG+I + + DG+VSV+L G C CPS T++ GI L+E+FG+ I
Sbjct: 35 ERVRPVLQMDGGDIVLKDITDGIVSVQLTGHCSGCPSRKNTLNAGILGCLQEEFGEKEIV 94
Query: 146 DIRQV 150
+I+++
Sbjct: 95 EIKEL 99
>gi|359410304|ref|ZP_09202769.1| nitrogen-fixing NifU domain-containing protein [Clostridium sp.
DL-VIII]
gi|357169188|gb|EHI97362.1| nitrogen-fixing NifU domain-containing protein [Clostridium sp.
DL-VIII]
Length = 73
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 86 LEDVRPYLIADGGNIDVVSVE-DGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
LE +RP L DGG++++V V +G+VSVK+QGACG+CP + T+ IE+ LKE+
Sbjct: 9 LEKIRPMLQRDGGDVELVDVSSNGIVSVKMQGACGNCPGAMMTIKGIIEQRLKEEV 64
>gi|347535482|ref|YP_004842907.1| NifU-like protein [Flavobacterium branchiophilum FL-15]
gi|345528640|emb|CCB68670.1| NifU-like protein [Flavobacterium branchiophilum FL-15]
Length = 80
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 46/64 (71%), Gaps = 2/64 (3%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGV-VSVKLQGACGSCPSSTTTMSMGIER 134
+LT K +++ L ++RP+L +DGG+I +V++E+G V V+L+GAC SC + TM G+E
Sbjct: 6 ELTQK-IEMALAEIRPFLNSDGGDISLVAIEEGKHVKVRLEGACNSCSVNQMTMKAGVET 64
Query: 135 VLKE 138
+K+
Sbjct: 65 TIKK 68
>gi|256372264|ref|YP_003110088.1| nitrogen-fixing NifU domain-containing protein [Acidimicrobium
ferrooxidans DSM 10331]
gi|256008848|gb|ACU54415.1| nitrogen-fixing NifU domain protein [Acidimicrobium ferrooxidans
DSM 10331]
Length = 109
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 43/58 (74%), Gaps = 2/58 (3%)
Query: 85 VLEDVRPYLIADGGNIDVVSV--EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
++E +RP + DGG++++V V E GVV V+L GAC SC ST+T+ +G+ER++K +F
Sbjct: 16 LIEQLRPAVQYDGGDLELVDVNTETGVVRVRLTGACSSCAISTSTIQLGVERIVKGRF 73
>gi|50312363|ref|XP_456215.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49645351|emb|CAG98923.1| KLLA0F25476p [Kluyveromyces lactis]
Length = 256
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 83 DLVLEDVRPYLIADGGNIDV--VSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
+L+ +RP ++ DGG+I + E G V +KLQGAC SC SS T+ GIE +LK +
Sbjct: 164 ELIQTRIRPAIMDDGGDIQYRGWNPETGTVYLKLQGACKSCSSSEDTLKHGIEAMLKH-Y 222
Query: 141 GDAIKDIRQVYDEEVRETTVEVSALLLCLISDKR 174
+ ++D+ Q+ D E + E L L S KR
Sbjct: 223 IEEVEDVVQILDPEEKIALAEFEKLEKKLESSKR 256
>gi|340057140|emb|CCC51482.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 261
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 45/67 (67%), Gaps = 3/67 (4%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVED--GVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
+L+ E VRP + DGG++ +++ + GVVS+ L GAC +CPSS T+ GIERV+K F
Sbjct: 138 ELLKEQVRPMVQRDGGDVKLLNYNEKSGVVSLALLGACRTCPSSQNTLKHGIERVMK-HF 196
Query: 141 GDAIKDI 147
+K++
Sbjct: 197 LPEVKEV 203
>gi|426400752|ref|YP_007019724.1| nifU-like domain-containing protein [Candidatus Endolissoclinum
patella L2]
gi|425857420|gb|AFX98456.1| nifU-like domain protein [Candidatus Endolissoclinum patella L2]
Length = 192
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 4/62 (6%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
VRP + DGG+I E+GVV++ + GAC CPSST T+ MGIE +L+ I ++R
Sbjct: 125 VRPAVSMDGGDIIFHGYENGVVTLTMHGACSGCPSSTATLKMGIENMLRHY----IPEVR 180
Query: 149 QV 150
+V
Sbjct: 181 EV 182
>gi|303245787|ref|ZP_07332070.1| nitrogen-fixing NifU domain protein [Desulfovibrio fructosovorans
JJ]
gi|302493050|gb|EFL52915.1| nitrogen-fixing NifU domain protein [Desulfovibrio fructosovorans
JJ]
Length = 73
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDG-VVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V+ L +RP L ADGG++++V V DG +V V+L GAC CP S T+ GIER+L +
Sbjct: 3 EKVEAALAKIRPSLQADGGDVELVEVTDGGIVKVRLTGACKGCPMSQMTLKNGIERILMQ 62
>gi|260431494|ref|ZP_05785465.1| NifU domain protein [Silicibacter lacuscaerulensis ITI-1157]
gi|260415322|gb|EEX08581.1| NifU domain protein [Silicibacter lacuscaerulensis ITI-1157]
Length = 187
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Query: 29 NERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVDLVL 86
++ +Q+ IKP +V++ S + + A A S ++ ++ + +L+
Sbjct: 66 DDDVQWDHIKPAILGAVMEHYQSGQPIM---GDGADAASGHAEHTGEDSEIVNQIKELLD 122
Query: 87 EDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
VRP + DGG+I + GVV + +QGAC CPSST T+ MGIE +L+
Sbjct: 123 SRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRH 174
>gi|402820017|ref|ZP_10869584.1| hypothetical protein IMCC14465_08180 [alpha proteobacterium
IMCC14465]
gi|402510760|gb|EJW21022.1| hypothetical protein IMCC14465_08180 [alpha proteobacterium
IMCC14465]
Length = 193
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
VRP + DGG+I E+GVVS+ ++GAC CPSST T+ GIE +LK F I ++R
Sbjct: 131 VRPAVAQDGGDIVFHGYEEGVVSLTMRGACAGCPSSTATLKHGIENLLKH-FIPEITEVR 189
>gi|402824159|ref|ZP_10873542.1| nitrogen-fixing NifU-like protein [Sphingomonas sp. LH128]
gi|402262332|gb|EJU12312.1| nitrogen-fixing NifU-like protein [Sphingomonas sp. LH128]
Length = 191
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
D+ A+ DL+ VRP + DGG+I +GVV + +QGAC CPSS+ T+ GIE +
Sbjct: 118 DIVAQIKDLIESRVRPAVANDGGDIIYRGFREGVVYLSMQGACSGCPSSSATLKHGIESL 177
Query: 136 LKE 138
LK
Sbjct: 178 LKH 180
>gi|305666181|ref|YP_003862468.1| Nitrogen-fixing NifU-like protein [Maribacter sp. HTCC2170]
gi|88707679|gb|EAQ99920.1| Nitrogen-fixing NifU-like protein [Maribacter sp. HTCC2170]
Length = 79
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Query: 81 NVDLVLEDVRPYLIADGGNIDVVSVE-DGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
NV+ LE++RP+L +DGG+I++VS++ D V VKLQGAC C + T+ G+E +K K
Sbjct: 9 NVEKALEEIRPFLQSDGGDIELVSIDNDSSVKVKLQGACVGCSVNQMTLKSGVEMTIK-K 67
Query: 140 FGDAIKDI 147
+ I+++
Sbjct: 68 YAPQIEEV 75
>gi|405355860|ref|ZP_11024972.1| NifU domain protein [Chondromyces apiculatus DSM 436]
gi|397091132|gb|EJJ21959.1| NifU domain protein [Myxococcus sp. (contaminant ex DSM 436)]
Length = 188
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 39/56 (69%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
D++ ++RP + DGG+I + EDG+V + ++G+C CPSST T+ MGIE L+E
Sbjct: 122 DILDSEIRPAVAMDGGDITLDRFEDGIVYLHMKGSCAGCPSSTATLKMGIEGRLRE 177
>gi|386819806|ref|ZP_10107022.1| thioredoxin-like protein [Joostella marina DSM 19592]
gi|386424912|gb|EIJ38742.1| thioredoxin-like protein [Joostella marina DSM 19592]
Length = 305
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSV--EDGVVSVKLQGACGSCPSSTTTMSMGIE 133
D + + +D++ E V+P + +DGGNI S E VSV LQGAC CPSST T+ GIE
Sbjct: 227 DTSKQIIDILEEYVKPAVASDGGNILFQSYDEESKTVSVILQGACSGCPSSTFTLKNGIE 286
Query: 134 RVLKEKFGDAIKDI 147
+LK D + ++
Sbjct: 287 SMLKSMLVDKVNEV 300
>gi|404449274|ref|ZP_11014264.1| thioredoxin-like protein [Indibacter alkaliphilus LW1]
gi|403764962|gb|EJZ25847.1| thioredoxin-like protein [Indibacter alkaliphilus LW1]
Length = 194
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 78 TAKNVDLVLED-VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
T K + +L++ +RP + DGG I S +G+V V LQG+C CPSST T+ GI+ +L
Sbjct: 119 TVKKIKGILDEYIRPAVEQDGGAIVFHSFHEGIVKVLLQGSCSGCPSSTVTLKAGIQNLL 178
Query: 137 KEKFGDAIKDIR 148
D +K+++
Sbjct: 179 TRMLPDEVKEVQ 190
>gi|260574570|ref|ZP_05842574.1| Scaffold protein Nfu/NifU [Rhodobacter sp. SW2]
gi|259023466|gb|EEW26758.1| Scaffold protein Nfu/NifU [Rhodobacter sp. SW2]
Length = 186
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
D+ + +L+ VRP + DGG+I + GVV + +QGAC CPSST T+ MGIE +
Sbjct: 111 DIVRQIKELLDSRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENL 170
Query: 136 LKE 138
L+
Sbjct: 171 LRH 173
>gi|6760408|gb|AAF28338.1|AF213379_1 r10h10-like protein TO42 [Drosophila melanogaster]
gi|6554171|gb|AAF16622.1| TO42 [Drosophila melanogaster]
Length = 286
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
+RP + DGG+I + E GVV +K+QG+C SCPSS T+ G++ +L + + ++ +
Sbjct: 193 IRPTVQEDGGDIVFMGYEGGVVKLKMQGSCSSCPSSIVTLKNGVQNML-QFYIPEVESVE 251
Query: 149 QVYDEEVR 156
QV+DE R
Sbjct: 252 QVFDEADR 259
>gi|338708627|ref|YP_004662828.1| Scaffold protein Nfu/NifU [Zymomonas mobilis subsp. pomaceae ATCC
29192]
gi|336295431|gb|AEI38538.1| Scaffold protein Nfu/NifU [Zymomonas mobilis subsp. pomaceae ATCC
29192]
Length = 182
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 72 AHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMG 131
A D+ + DL+ VRP + DGG+I EDG+V + ++GAC CPSS T+ G
Sbjct: 105 AEDNDIVIQIKDLIATRVRPAVARDGGDIVFQKFEDGIVYLSMRGACSGCPSSVATLKQG 164
Query: 132 IERVLKEKFGDAIKDIRQV 150
+E +LK F + ++R +
Sbjct: 165 VESLLKH-FVPEVTEVRAI 182
>gi|89068101|ref|ZP_01155518.1| Nitrogen-fixing NifU [Oceanicola granulosus HTCC2516]
gi|89046340|gb|EAR52397.1| Nitrogen-fixing NifU [Oceanicola granulosus HTCC2516]
Length = 186
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 70 YSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMS 129
++ ++ A+ +L+ VRP + DGG+I + GVV + +QGAC CPSST T+
Sbjct: 105 HTGEDGEIVAQIKELLDTRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLK 164
Query: 130 MGIERVLKE 138
MGIE +L+
Sbjct: 165 MGIENLLRH 173
>gi|347964133|ref|XP_310479.5| AGAP000598-PA [Anopheles gambiae str. PEST]
gi|333466873|gb|EAA06366.5| AGAP000598-PA [Anopheles gambiae str. PEST]
Length = 273
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
+RP + DGG+I + +DGVV +K+QG+C SCPSS T+ G++ +L+ + + +
Sbjct: 181 IRPTVQEDGGDIIFMGFDDGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEVVS-VE 239
Query: 149 QVYDEEVRETTVEVSAL 165
QV DE + E S L
Sbjct: 240 QVTDEADKVAEQEFSRL 256
>gi|114764450|ref|ZP_01443675.1| nifU domain protein [Pelagibaca bermudensis HTCC2601]
gi|114543017|gb|EAU46036.1| nifU domain protein [Roseovarius sp. HTCC2601]
Length = 186
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+L+ VRP + DGG+I E GVV + +QGAC CPSST T+ MGIE +L+
Sbjct: 118 ELLDSRVRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLRH 173
>gi|308272822|emb|CBX29426.1| hypothetical protein N47_J04070 [uncultured Desulfobacterium sp.]
Length = 61
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+RP L DGG++++V V +G+V V+LQGAC CP S T+ GIE++L +
Sbjct: 1 MRPMLQKDGGDVEIVDVSEGIVKVRLQGACAGCPMSQMTLKNGIEKLLMQ 50
>gi|85709112|ref|ZP_01040178.1| possible NifU-like domain protein [Erythrobacter sp. NAP1]
gi|85690646|gb|EAQ30649.1| possible NifU-like domain protein [Erythrobacter sp. NAP1]
Length = 193
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 35/55 (63%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
+L+ VRP + DGG+I DGVV + LQGAC CPSST T+ GIE +LK
Sbjct: 127 ELLETRVRPAVAGDGGDIAYRGFSDGVVYLTLQGACAGCPSSTATLKHGIESLLK 181
>gi|344923779|ref|ZP_08777240.1| thioredoxin [Candidatus Odyssella thessalonicensis L13]
Length = 183
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 38/55 (69%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
+L+ VRP + DGG+I + E+G+V +K+QGAC CPSST T+ GIE +L+
Sbjct: 116 ELIDTRVRPAVAQDGGDILFHAFENGIVYLKMQGACSGCPSSTATLKSGIENMLR 170
>gi|432874670|ref|XP_004072534.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Oryzias latipes]
Length = 250
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
+RP + DGG++ EDGVV +KLQG+C SCPSS T+ GI+ +L + + ++ +
Sbjct: 179 IRPTVQEDGGDVVYRGFEDGVVKLKLQGSCTSCPSSIVTLKSGIQNML-QFYVPEVESVE 237
Query: 149 QVYDEEVRE 157
QV D+E E
Sbjct: 238 QVKDDEDEE 246
>gi|392934475|gb|AFM92572.1| Fe-S cluster assembly protein [Acaryochloris sp. HICR111A]
Length = 332
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 37/53 (69%)
Query: 87 EDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
E+VRP LIADGG++++ V VV V L+GACG C SST T+ IE L+++
Sbjct: 270 EEVRPLLIADGGDVELFDVSGDVVKVSLKGACGDCDSSTATLKGAIETRLQDR 322
>gi|301758232|ref|XP_002914967.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Ailuropoda melanoleuca]
Length = 420
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L+ +
Sbjct: 341 ELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 400
Query: 143 AIKDIRQVYDEEVRE 157
++ + QV D+E E
Sbjct: 401 -VEGVEQVMDDESDE 414
>gi|115390869|ref|XP_001212939.1| HIRA-interacting protein 5 [Aspergillus terreus NIH2624]
gi|114193863|gb|EAU35563.1| HIRA-interacting protein 5 [Aspergillus terreus NIH2624]
Length = 323
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I+ E+G+V +KL+GAC +C SST T+ GIE +L + +
Sbjct: 220 ELLDTRIRPAIQEDGGDIEFRGFENGIVMLKLRGACRTCDSSTVTLRNGIESMLM-HYIE 278
Query: 143 AIKDIRQVYDEE 154
++ + QV D E
Sbjct: 279 EVQGVEQVMDAE 290
>gi|338532886|ref|YP_004666220.1| NifU family protein [Myxococcus fulvus HW-1]
gi|337258982|gb|AEI65142.1| NifU family protein [Myxococcus fulvus HW-1]
Length = 188
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 39/56 (69%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
D++ ++RP + DGG+I + EDG+V + ++G+C CPSST T+ MGIE L+E
Sbjct: 122 DILDSEIRPAVAMDGGDITLDRFEDGIVYLHMKGSCAGCPSSTATLKMGIEGRLRE 177
>gi|444721161|gb|ELW61913.1| NFU1 iron-sulfur cluster scaffold like protein, mitochondrial
[Tupaia chinensis]
Length = 143
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 26 TKFNERLQFISIKP--KNSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVD 83
TK NE L + +KP +++ S PS AGS ++ A +
Sbjct: 37 TKENEELDWNLLKPVIYATIMDFFASGLPLYTEETPSGEAGSE------EDDEVVAMIKE 90
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
L+ +RP + DGG+I EDG+V +KLQG+C SCPSS+ T+ GI+ L
Sbjct: 91 LLGTRIRPTVQEDGGDIIYKGFEDGIVQLKLQGSCTSCPSSSVTLKNGIQNKL 143
>gi|392390342|ref|YP_006426945.1| thioredoxin-like protein [Ornithobacterium rhinotracheale DSM
15997]
gi|390521420|gb|AFL97151.1| thioredoxin-like protein [Ornithobacterium rhinotracheale DSM
15997]
Length = 292
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 54 IRASNPSAPAGSSPGLYSAHQFDLTAKNVDLVLED-VRPYLIADGGNIDVVSVEDGVVSV 112
I S+ +AP + T K + VL+ ++P + DGGNI ++S ++ +
Sbjct: 191 IVKSDYTAPKNEWEEHLEQKVYSGTEKEIQRVLDQYIQPAVANDGGNIALISFDESTKTA 250
Query: 113 K--LQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIRQV 150
K LQGAC CPSST T+ GIE +LKE + ++ + +
Sbjct: 251 KMLLQGACSGCPSSTITLKNGIEAMLKEMLPNVVEHVEAI 290
>gi|355707161|gb|AES02874.1| NFU1 iron-sulfur cluster scaffold-like protein [Mustela putorius
furo]
Length = 202
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
+RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L+ + ++ +
Sbjct: 135 IRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQ-FYIPEVEGVE 193
Query: 149 QVYDEEVRE 157
QV D+E E
Sbjct: 194 QVMDDESDE 202
>gi|329769819|ref|ZP_08261220.1| hypothetical protein HMPREF0433_00984 [Gemella sanguinis M325]
gi|328838181|gb|EGF87799.1| hypothetical protein HMPREF0433_00984 [Gemella sanguinis M325]
Length = 84
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%)
Query: 78 TAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
T + + LE +RP LI DGG+I+ V+ +DG++ ++ +G C C S TM IE+ +
Sbjct: 8 TISKIKIELEKIRPKLIMDGGDIEFVNFKDGILKLRFKGECAHCELSHITMKFAIEKNIL 67
Query: 138 EK 139
EK
Sbjct: 68 EK 69
>gi|24643765|ref|NP_728443.1| CG32857 [Drosophila melanogaster]
gi|45551492|ref|NP_728447.2| CG32500 [Drosophila melanogaster]
gi|45556188|ref|NP_996529.1| CG33502 [Drosophila melanogaster]
gi|74866115|sp|Q8SY96.1|NFU1_DROME RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|17946577|gb|AAL49319.1| RH16335p [Drosophila melanogaster]
gi|22831388|gb|AAG22462.2| CG33502 [Drosophila melanogaster]
gi|22831391|gb|AAN09001.1| CG32857 [Drosophila melanogaster]
gi|45446754|gb|AAN09005.2| CG32500 [Drosophila melanogaster]
gi|220949278|gb|ACL87182.1| CG32500-PA [synthetic construct]
gi|220958368|gb|ACL91727.1| CG32500-PA [synthetic construct]
Length = 283
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
+RP + DGG+I + E GVV +K+QG+C SCPSS T+ G++ +L + + ++ +
Sbjct: 190 IRPTVQEDGGDIVFMGYEGGVVKLKMQGSCSSCPSSIVTLKNGVQNML-QFYIPEVESVE 248
Query: 149 QVYDEEVR 156
QV+DE R
Sbjct: 249 QVFDEADR 256
>gi|373954769|ref|ZP_09614729.1| nitrogen-fixing NifU domain-containing protein [Mucilaginibacter
paludis DSM 18603]
gi|373891369|gb|EHQ27266.1| nitrogen-fixing NifU domain-containing protein [Mucilaginibacter
paludis DSM 18603]
Length = 92
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 82 VDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
V+ L+ +RPYL DGGN+ V + D VV +KL G+CGSCP S T+ GIE+ +K+
Sbjct: 7 VEAALDTIRPYLETDGGNVSVEEITADNVVKLKLLGSCGSCPMSIMTLKAGIEQAIKK 64
>gi|347757698|ref|YP_004865260.1| nifU-like domain-containing protein [Micavibrio aeruginosavorus
ARL-13]
gi|347590216|gb|AEP09258.1| nifU-like domain protein [Micavibrio aeruginosavorus ARL-13]
Length = 189
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
+ A+ +L+ VRP + +DGG+I EDG+V ++++GAC CPSST T+ +GIE +L
Sbjct: 114 IIAQIEELLETRVRPAVQSDGGDIVFDRFEDGIVFLRMRGACAGCPSSTATLKVGIENML 173
Query: 137 KEKFGDAIKDIRQVYD 152
+ + + ++RQ D
Sbjct: 174 RHYVPEVL-EVRQADD 188
>gi|254421266|ref|ZP_05034984.1| Fe-S cluster assembly protein NifU [Synechococcus sp. PCC 7335]
gi|196188755|gb|EDX83719.1| Fe-S cluster assembly protein NifU [Synechococcus sp. PCC 7335]
Length = 294
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 13/112 (11%)
Query: 34 FISIKPKNSVLQKSGSHETAIRASN-PSAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPY 92
I ++ + + L + E A +A+N P P + +L + ++ EDVRP
Sbjct: 190 LIEVQQERTALSARVASEVASQATNKPLTPM---------QKINLIQQ---VIAEDVRPI 237
Query: 93 LIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
L+ADGG+I++ V+ VV V L GACG C SS+ T+ IE L+ K I
Sbjct: 238 LLADGGDIELYDVDGDVVRVLLTGACGGCASSSETLKNSIETSLQAKVSSTI 289
>gi|452847968|gb|EME49900.1| hypothetical protein DOTSEDRAFT_68641 [Dothistroma septosporum
NZE10]
Length = 265
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
+RP + DGG+I+ DG V +KL+GAC +C SST T+ GIE +L + + +K ++
Sbjct: 164 IRPAIQEDGGDIEFRGFHDGQVLLKLRGACRTCDSSTVTLKNGIESMLM-HYVEEVKGVQ 222
Query: 149 QVYDEE 154
QV D+E
Sbjct: 223 QVMDQE 228
>gi|393247544|gb|EJD55051.1| HIRA-interacting protein 5 [Auricularia delicata TFB-10046 SS5]
Length = 223
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Query: 37 IKPK-NSVLQKSGSHETAI-RASNPSAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLI 94
+KP+ S+L + S + + R+ A AG D A +L+ VRP ++
Sbjct: 76 LKPEIYSILMEHFSAQAPLFRSDQERAAAGPQDTRVLETDSDTVAMIKELLDTRVRPAIM 135
Query: 95 ADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIRQVYDE 153
DGG+I+ EDG+V VKL+G+C C SST T+ GIER+L + ++ + QV D+
Sbjct: 136 EDGGDIEYRGFGEDGIVRVKLKGSCRGCDSSTVTLKSGIERMLMHYIPE-VQGVEQVLDQ 194
Query: 154 E 154
E
Sbjct: 195 E 195
>gi|192288888|ref|YP_001989493.1| Scaffold protein Nfu/NifU [Rhodopseudomonas palustris TIE-1]
gi|192282637|gb|ACE99017.1| Scaffold protein Nfu/NifU [Rhodopseudomonas palustris TIE-1]
Length = 188
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
DL+ VRP + DGG+I +DG+V + ++GAC CPSST T+ GI+ +LK
Sbjct: 121 DLIETRVRPAVANDGGDITFRGFKDGIVYLNMRGACAGCPSSTATLQHGIQNLLKH 176
>gi|39933530|ref|NP_945806.1| NifU-like domain-containing protein [Rhodopseudomonas palustris
CGA009]
gi|39647376|emb|CAE25897.1| possible NifU-like domain (residues 119-187) [Rhodopseudomonas
palustris CGA009]
Length = 188
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
DL+ VRP + DGG+I +DG+V + ++GAC CPSST T+ GI+ +LK
Sbjct: 121 DLIETRVRPAVANDGGDITFRGFKDGIVYLNMRGACAGCPSSTATLQHGIQNLLKH 176
>gi|341887429|gb|EGT43364.1| CBN-LPD-8 protein [Caenorhabditis brenneri]
Length = 228
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
+RP + DGG+I V +DGVV +K+QG+C CPSS T+ GIE +L + +K++
Sbjct: 145 IRPMVQEDGGDITYVGFDDGVVKLKMQGSCTGCPSSGVTLKNGIENMLT-FYVPEVKEVI 203
Query: 149 QVYDE 153
+V DE
Sbjct: 204 EVKDE 208
>gi|27375911|ref|NP_767440.1| hypothetical protein bll0800 [Bradyrhizobium japonicum USDA 110]
gi|27349049|dbj|BAC46065.1| bll0800 [Bradyrhizobium japonicum USDA 110]
Length = 189
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
DL+ VRP + DGG+I +DG+V + ++GAC CPSST T+ GI+ +LK D
Sbjct: 123 DLIETRVRPAVANDGGDITFRGFKDGIVYLNMKGACSGCPSSTATLQHGIQNLLKHFVPD 182
Query: 143 AIK 145
++
Sbjct: 183 VVE 185
>gi|425790268|ref|YP_007018185.1| NifU [Helicobacter pylori Aklavik86]
gi|425628583|gb|AFX89123.1| conserved hypothetical nifU-like protein [Helicobacter pylori
Aklavik86]
Length = 89
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
K V + +E +RPYL+ DGGNI+V+ ++ + V L+GAC +C SS T+ +ER LK
Sbjct: 11 KPVHIAIEKIRPYLLRDGGNIEVLGIKSMKIYVALEGACKTCSSSKITLKNVVERQLK 68
>gi|256820781|ref|YP_003142060.1| nitrogen-fixing NifU domain-containing protein [Capnocytophaga
ochracea DSM 7271]
gi|256582364|gb|ACU93499.1| nitrogen-fixing NifU domain protein [Capnocytophaga ochracea DSM
7271]
Length = 299
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSV--EDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+++ + + ++ E V+P + +DGGNI +S E V V LQGAC CPSST T+ GIE
Sbjct: 221 EVSKQIIAIIDEFVKPAVASDGGNIQFISYNPETHYVEVILQGACSGCPSSTLTLKKGIE 280
Query: 134 RVLKEKFGD 142
+LK+K +
Sbjct: 281 VILKDKLQN 289
>gi|255532822|ref|YP_003093194.1| nitrogen-fixing NifU domain-containing protein [Pedobacter
heparinus DSM 2366]
gi|255345806|gb|ACU05132.1| nitrogen-fixing NifU domain protein [Pedobacter heparinus DSM 2366]
Length = 183
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
DL K ++ + VRP + DGG I S +DGVV+V+L+G+C CPSST T+ GI+ +
Sbjct: 108 DLEIKIQQILHDYVRPAVEQDGGAISYKSFDDGVVTVELRGSCSGCPSSTITLKSGIQNL 167
Query: 136 LK 137
L+
Sbjct: 168 LQ 169
>gi|126734863|ref|ZP_01750609.1| NifU-like domain protein [Roseobacter sp. CCS2]
gi|126715418|gb|EBA12283.1| NifU-like domain protein [Roseobacter sp. CCS2]
Length = 187
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
VRP + DGG+I E G+V + +QGAC CPSST T+ MGIE +L+
Sbjct: 125 VRPAVAQDGGDITFHGFERGIVYLHMQGACAGCPSSTLTLKMGIENLLRH 174
>gi|384097413|ref|ZP_09998534.1| NifU-like/thioredoxin-like protein [Imtechella halotolerans K1]
gi|383837381|gb|EID76781.1| NifU-like/thioredoxin-like protein [Imtechella halotolerans K1]
Length = 79
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 81 NVDLVLEDVRPYLIADGGNIDVVSVEDG-VVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
NV+ L ++RP+L +DGGNI +V +EDG +V V+L+GAC +C + T+ G+E +K K
Sbjct: 9 NVEKALNEIRPFLESDGGNISLVGIEDGKLVRVRLEGACVACSVNQMTLRSGVEMTIK-K 67
Query: 140 FGDAIKDIRQV 150
+ I+ + V
Sbjct: 68 YAPQIETVINV 78
>gi|338213103|ref|YP_004657158.1| nitrogen-fixing NifU domain-containing protein [Runella
slithyformis DSM 19594]
gi|336306924|gb|AEI50026.1| nitrogen-fixing NifU domain-containing protein [Runella
slithyformis DSM 19594]
Length = 87
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 74 QFDLTAKNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGI 132
Q DL V+ L +RPYL ADGGN+ V + +D V ++L G+C SCP ST T G+
Sbjct: 5 QADLLKSRVETALNSIRPYLEADGGNVAVKEITDDMTVRLELIGSCSSCPMSTMTFKAGL 64
Query: 133 ERVLKEKFGDAIKDIRQV 150
E E ++ +IR+V
Sbjct: 65 E----EAILKSVPEIRKV 78
>gi|452965143|gb|EME70170.1| HIRA-interacting protein 5 [Magnetospirillum sp. SO-1]
Length = 182
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
VRP + DGG+I + EDG+V + LQGAC CPSS+ T+ GIE +LK
Sbjct: 121 VRPAVAQDGGDIIFRAFEDGIVYLHLQGACSGCPSSSATLKHGIENMLK 169
>gi|225848086|ref|YP_002728249.1| hypothetical protein SULAZ_0254 [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225643275|gb|ACN98325.1| conserved domain protein [Sulfurihydrogenibium azorense Az-Fu1]
Length = 79
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V+ VLE VRPYL DGG++++V V EDG V V+L G+C C S T+ G+E LK+
Sbjct: 6 QKVEEVLEQVRPYLRFDGGDVELVDVSEDGTVYVRLMGSCSGCAMSLWTLKGGVEARLKQ 65
Query: 139 KFGDAIKDIRQV 150
AI ++++V
Sbjct: 66 ----AIPEVKEV 73
>gi|409097879|ref|ZP_11217903.1| nitrogen-fixing NifU domain-containing protein [Pedobacter agri
PB92]
Length = 81
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIE 133
+LT + V+ LE +RPYL ADGG++ V + +G V +KL G CGSCP S TM GIE
Sbjct: 1 MNLT-EQVEQALETIRPYLKADGGDVSVEEITSEGTVKLKLLGNCGSCPMSFMTMKSGIE 59
Query: 134 RVL 136
+ +
Sbjct: 60 QAI 62
>gi|390954324|ref|YP_006418082.1| thioredoxin-like protein [Aequorivita sublithincola DSM 14238]
gi|390420310|gb|AFL81067.1| thioredoxin-like protein [Aequorivita sublithincola DSM 14238]
Length = 79
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 46/64 (71%), Gaps = 2/64 (3%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDG-VVSVKLQGACGSCPSSTTTMSMGIER 134
+LT K ++ L+++RP+L DGG+I +VS+EDG VV+V+LQGAC C + T+ G+E
Sbjct: 5 ELTTK-IEEALDEIRPFLQNDGGDISLVSIEDGKVVNVQLQGACVGCSVNQMTLKSGVEM 63
Query: 135 VLKE 138
+K+
Sbjct: 64 TIKK 67
>gi|254454487|ref|ZP_05067924.1| NifU domain protein [Octadecabacter arcticus 238]
gi|198268893|gb|EDY93163.1| NifU domain protein [Octadecabacter arcticus 238]
Length = 183
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 36/57 (63%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIK 145
VRP + DGG+I E GVV ++LQGAC CPSST T+ GIE +L+ D I+
Sbjct: 123 VRPAVAQDGGDILFHGFERGVVYLQLQGACSGCPSSTATLKGGIENMLRHYIPDVIE 179
>gi|162448199|ref|YP_001621331.1| NifU-like domain-containing protein [Acholeplasma laidlawii PG-8A]
gi|161986306|gb|ABX81955.1| NifU-like domain protein [Acholeplasma laidlawii PG-8A]
Length = 77
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 43/66 (65%)
Query: 75 FDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIER 134
++ + V +++ VRPY+ DGG+I++V++EDG+V VK+ GAC C + T+ GIE
Sbjct: 3 IEVMTEQVGQIIKRVRPYIQRDGGDIELVNIEDGIVYVKMGGACDGCAAIDITLKQGIET 62
Query: 135 VLKEKF 140
++ E
Sbjct: 63 MMLENV 68
>gi|392380839|ref|YP_005030035.1| putative iron-sulfur cluster scaffold,NifU-like [Azospirillum
brasilense Sp245]
gi|356875803|emb|CCC96551.1| putative iron-sulfur cluster scaffold,NifU-like [Azospirillum
brasilense Sp245]
Length = 184
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 4/113 (3%)
Query: 26 TKFNERLQFISIKPKNSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVDLV 85
TK ++ F+ +KP S+L H TA R AG SA ++ + +L+
Sbjct: 64 TKAGDKEWFL-LKP--SILGVIMEHFTANRPVLLEEAAGDGHAA-SADDDEIVTQIKELL 119
Query: 86 LEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
VRP + DGG+I E+GVV ++++GAC CPSST T+ GIE +L+
Sbjct: 120 DTRVRPAVAQDGGDITFYGFEEGVVYLEMKGACSGCPSSTATLKAGIENMLRH 172
>gi|268570156|ref|XP_002648431.1| C. briggsae CBR-LPD-8 protein [Caenorhabditis briggsae]
Length = 228
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
+RP + DGG+I V +DGVV +K+QG+C CPSS T+ GIE +L + +K++
Sbjct: 145 IRPMVQEDGGDITYVGFDDGVVKLKMQGSCTGCPSSGVTLKNGIENMLT-FYVPEVKEVI 203
Query: 149 QVYDE 153
+V DE
Sbjct: 204 EVKDE 208
>gi|255525728|ref|ZP_05392659.1| nitrogen-fixing NifU domain protein [Clostridium carboxidivorans
P7]
gi|296188013|ref|ZP_06856405.1| NifU-like domain protein [Clostridium carboxidivorans P7]
gi|255510551|gb|EET86860.1| nitrogen-fixing NifU domain protein [Clostridium carboxidivorans
P7]
gi|296047139|gb|EFG86581.1| NifU-like domain protein [Clostridium carboxidivorans P7]
Length = 73
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 86 LEDVRPYLIADGGNIDVVSVE-DGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
L +RP L DGG++++V V DG+VSVK+QGACG+CP + T+ IE LKE+
Sbjct: 9 LNKIRPMLQRDGGDVELVDVSSDGIVSVKMQGACGNCPGAMMTIKGVIEATLKEEV 64
>gi|291386642|ref|XP_002709869.1| PREDICTED: HIRA interacting protein 5 [Oryctolagus cuniculus]
Length = 255
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 68/134 (50%), Gaps = 9/134 (6%)
Query: 26 TKFNERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVD 83
TK NE L + +KP +++ S + S AGS ++ A +
Sbjct: 123 TKDNEELDWNLLKPDIYATIMDFFASGLPLVTEETSSGEAGSE------EDDEVVAMIKE 176
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDA 143
L+ +RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L + +
Sbjct: 177 LLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNML-QFYIPE 235
Query: 144 IKDIRQVYDEEVRE 157
++ + QV ++E E
Sbjct: 236 VEGVEQVMEDESDE 249
>gi|46201919|ref|ZP_00054106.2| COG0694: Thioredoxin-like proteins and domains [Magnetospirillum
magnetotacticum MS-1]
Length = 182
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
VRP + DGG+I + EDG+V + LQGAC CPSS+ T+ GIE +LK
Sbjct: 121 VRPAVAQDGGDIIFRAFEDGIVYLHLQGACSGCPSSSATLKHGIENMLK 169
>gi|402850727|ref|ZP_10898916.1| NifU-like domain protein [Rhodovulum sp. PH10]
gi|402498988|gb|EJW10711.1| NifU-like domain protein [Rhodovulum sp. PH10]
Length = 184
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
DL+ VRP + DGG+I +DGVV + ++GAC CPSST T+ GI+ +L+ F
Sbjct: 118 DLIDNRVRPAVANDGGDITFKGFKDGVVYLTMKGACSGCPSSTATLRHGIQNLLRH-FVP 176
Query: 143 AIKDIRQV 150
++++R V
Sbjct: 177 EVEEVRPV 184
>gi|322379101|ref|ZP_08053503.1| conserved hypothetical nifU-like protein [Helicobacter suis HS1]
gi|322380564|ref|ZP_08054730.1| NifU-like protein [Helicobacter suis HS5]
gi|321147026|gb|EFX41760.1| NifU-like protein [Helicobacter suis HS5]
gi|321148473|gb|EFX42971.1| conserved hypothetical nifU-like protein [Helicobacter suis HS1]
Length = 89
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
K V LE +RP L+ DGG++ ++ +++ V V L+GAC C SS T+ GIER L+E+
Sbjct: 10 KPVQRALEKIRPVLLRDGGDVVLLGIKEAKVYVSLEGACKGCSSSANTLKFGIERCLQEE 69
Query: 140 F 140
Sbjct: 70 I 70
>gi|343084687|ref|YP_004773982.1| Scaffold protein Nfu/NifU [Cyclobacterium marinum DSM 745]
gi|342353221|gb|AEL25751.1| Scaffold protein Nfu/NifU [Cyclobacterium marinum DSM 745]
Length = 193
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 41/68 (60%)
Query: 69 LYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTM 128
L+ + ++ K ++ E +RP + DGG I S +DGVV V LQGAC CPSST T+
Sbjct: 111 LFDENDSEVVKKIKGILDEYIRPAVEQDGGAIVFHSFQDGVVKVLLQGACSGCPSSTVTL 170
Query: 129 SMGIERVL 136
GIE +L
Sbjct: 171 KSGIENLL 178
>gi|347535419|ref|YP_004842844.1| hypothetical protein FBFL15_0488 [Flavobacterium branchiophilum
FL-15]
gi|345528577|emb|CCB68607.1| Protein of unknown function [Flavobacterium branchiophilum FL-15]
Length = 297
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 62 PAGSSPGLYSAHQFDLTAKNVDLVLED-VRPYLIADGGNI--DVVSVEDGVVSVKLQGAC 118
P L + D+T++ + +LE+ V+P + ADGGNI D + + V V LQGAC
Sbjct: 206 PKQEKQQLQDFDKLDVTSQQIINILEEYVKPAVAADGGNILFDSYNEAEKRVKVVLQGAC 265
Query: 119 GSCPSSTTTMSMGIERVLKEKFGD 142
CPSST T+ GIE +LK+ +
Sbjct: 266 NGCPSSTFTLKNGIENMLKDMLNE 289
>gi|194897711|ref|XP_001978709.1| GG17526 [Drosophila erecta]
gi|263504966|sp|B3NYF7.1|NFU1_DROER RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|190650358|gb|EDV47636.1| GG17526 [Drosophila erecta]
Length = 283
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
+RP + DGG+I + E GVV +K+QG+C SCPSS T+ G++ +L + + ++ +
Sbjct: 190 IRPTVQEDGGDIVFMGYEAGVVKLKMQGSCSSCPSSIVTLKNGVQNML-QFYIPEVESVE 248
Query: 149 QVYDEEVR 156
QV+DE R
Sbjct: 249 QVFDEADR 256
>gi|404447730|ref|ZP_11012724.1| thioredoxin-like protein [Indibacter alkaliphilus LW1]
gi|403766316|gb|EJZ27188.1| thioredoxin-like protein [Indibacter alkaliphilus LW1]
Length = 82
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 82 VDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
V+ L+ +RPYL ADGGN+ +V + ++ V+ ++L G C SCP ST T+ G+E +K
Sbjct: 9 VEKALDTIRPYLEADGGNVRIVEITKEKVLKLELTGTCSSCPMSTMTLKAGVEEAIKRDI 68
Query: 141 GDAIK 145
+ IK
Sbjct: 69 PEIIK 73
>gi|154414462|ref|XP_001580258.1| NifU-like domain containing protein [Trichomonas vaginalis G3]
gi|121914474|gb|EAY19272.1| NifU-like domain containing protein [Trichomonas vaginalis G3]
Length = 103
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDA 143
++ E VRP L++DGG+I + + DG+V+V++ G C CPS T++ I L+++FGD
Sbjct: 32 VIEERVRPALLSDGGDITLKDITDGIVTVQMFGHCVGCPSKQITLNSRILDCLQDEFGDK 91
Query: 144 -IKDIRQVYDEE 154
I DI+++ + E
Sbjct: 92 DIVDIKEIPNTE 103
>gi|83313502|ref|YP_423766.1| HIRA-interacting protein 5 [Magnetospirillum magneticum AMB-1]
gi|82948343|dbj|BAE53207.1| HIRA-interacting protein 5 [Magnetospirillum magneticum AMB-1]
Length = 190
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
VRP + DGG+I + EDG+V + LQGAC CPSS+ T+ GIE +LK
Sbjct: 129 VRPAVAQDGGDIIFRAFEDGIVYLHLQGACSGCPSSSATLKHGIENMLK 177
>gi|326334857|ref|ZP_08201058.1| nitrogen-fixing NifU domain protein [Capnocytophaga sp. oral taxon
338 str. F0234]
gi|325692894|gb|EGD34832.1| nitrogen-fixing NifU domain protein [Capnocytophaga sp. oral taxon
338 str. F0234]
Length = 295
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 76 DLTAKNVDLVLED-VRPYLIADGGNIDVVSV--EDGVVSVKLQGACGSCPSSTTTMSMGI 132
D+ ++ + +L+ ++P + +DGGNI VS E VV V +QGAC CPSS T+ GI
Sbjct: 217 DIYSRKIIAILDQYIKPAVSSDGGNIQFVSYDKESQVVKVLMQGACNGCPSSKLTLKQGI 276
Query: 133 ERVLKEKFGD 142
E +L+EK +
Sbjct: 277 EAILREKMKN 286
>gi|149195166|ref|ZP_01872257.1| Nitrogen-fixing NifU-like protein [Caminibacter mediatlanticus
TB-2]
gi|149134718|gb|EDM23203.1| Nitrogen-fixing NifU-like protein [Caminibacter mediatlanticus
TB-2]
Length = 98
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 76 DLTAKNVDL------VLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMS 129
D+ N DL V+E++RP L DGG++ ++ V+ +V V+LQG C C S+ T+
Sbjct: 3 DIPFSNEDLKEAVAGVIEEIRPMLQMDGGDVKLIDVKKPIVFVQLQGGCVGCASAGATLK 62
Query: 130 MGIERVLKEKF 140
GIE+ LKEK
Sbjct: 63 YGIEKALKEKI 73
>gi|363752451|ref|XP_003646442.1| hypothetical protein Ecym_4593 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890077|gb|AET39625.1| hypothetical protein Ecym_4593 [Eremothecium cymbalariae
DBVPG#7215]
Length = 246
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 70 YSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSV--EDGVVSVKLQGACGSCPSSTTT 127
Y + +++ +L+ +RP ++ DGG+ID E G+V +KLQGAC SC SS T
Sbjct: 138 YDEDEQEISEMIEELIQTRIRPAIMDDGGDIDYRGWDPETGIVYLKLQGACKSCSSSEVT 197
Query: 128 MSMGIERVLKEKFGDAIKDIRQVYD 152
+ GIE +LK + D ++ + Q+ D
Sbjct: 198 LKSGIESMLK-HYIDEVEGVEQILD 221
>gi|408395926|gb|EKJ75097.1| hypothetical protein FPSE_04717 [Fusarium pseudograminearum CS3096]
Length = 304
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Query: 55 RASNPSAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVED-GVVSVK 113
R AP Y+ + ++ +L+ +RP + DGG+ID +D G V ++
Sbjct: 180 REGEAGAPVEEDSLAYNENDSEVVGMIKELLETRIRPAIQEDGGDIDFRGFDDEGYVHLR 239
Query: 114 LQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIRQVYDEE 154
L+GAC +C SST T+ GIE +L + + +K ++QV D+E
Sbjct: 240 LRGACRTCDSSTVTLKNGIEGMLMH-YIEEVKGVKQVMDQE 279
>gi|393773293|ref|ZP_10361691.1| nitrogen-fixing NifU-like protein [Novosphingobium sp. Rr 2-17]
gi|392721173|gb|EIZ78640.1| nitrogen-fixing NifU-like protein [Novosphingobium sp. Rr 2-17]
Length = 192
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
D+ A+ DL+ VRP + DGG+I +GVV + +QGAC CPSS+ T+ GIE +
Sbjct: 119 DIVAQIRDLIETRVRPAVANDGGDIIYRGFREGVVYLTMQGACAGCPSSSATLKHGIESL 178
Query: 136 LKE 138
LK
Sbjct: 179 LKH 181
>gi|380490165|emb|CCF36199.1| hypothetical protein CH063_01450 [Colletotrichum higginsianum]
Length = 318
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Query: 53 AIRASNPSAPAGSSPGL-YSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVED-GVV 110
A+ AS P G L Y + ++ +L+ +RP + DGG+I+ D GVV
Sbjct: 190 AVGASGEQQPHGEEDSLAYDENDSEVVGMIKELLETRIRPAIQEDGGDIEFRGFTDEGVV 249
Query: 111 SVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIRQVYDEE 154
+KL+GAC +C SST T+ GIE +L + + +K + Q+ D+E
Sbjct: 250 LLKLRGACRTCDSSTVTLKNGIEGMLMH-YIEEVKGVEQILDQE 292
>gi|308492754|ref|XP_003108567.1| CRE-LPD-8 protein [Caenorhabditis remanei]
gi|308248307|gb|EFO92259.1| CRE-LPD-8 protein [Caenorhabditis remanei]
Length = 223
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
+RP + DGG+I V +DGVV +K+QG+C CPSS T+ GIE +L + +K++
Sbjct: 140 IRPMVQEDGGDITYVGFDDGVVKLKMQGSCTGCPSSGVTLKNGIENMLT-FYVPEVKEVI 198
Query: 149 QVYDE 153
+V DE
Sbjct: 199 EVKDE 203
>gi|195482335|ref|XP_002102005.1| GE15286 [Drosophila yakuba]
gi|263505516|sp|B4PZ52.1|NFU1_DROYA RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|194189529|gb|EDX03113.1| GE15286 [Drosophila yakuba]
Length = 283
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
+RP + DGG+I + E GVV +K+QG+C SCPSS T+ G++ +L + + ++ +
Sbjct: 190 IRPTVQEDGGDIVFMGYEAGVVKLKMQGSCSSCPSSIVTLKNGVQNML-QFYIPEVESVE 248
Query: 149 QVYDEEVR 156
QV+DE R
Sbjct: 249 QVFDEADR 256
>gi|238231487|ref|NP_001154157.1| HIRA-interacting protein 5 [Oncorhynchus mykiss]
gi|225704456|gb|ACO08074.1| HIRA-interacting protein 5 [Oncorhynchus mykiss]
Length = 250
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
+RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L + + ++ +
Sbjct: 180 IRPTVQEDGGDVLYCGFEDGIVKLKLQGSCTSCPSSMVTLKSGIQNML-QFYVPEVEGVE 238
Query: 149 QVYDEE 154
QV DE+
Sbjct: 239 QVKDEQ 244
>gi|374599800|ref|ZP_09672802.1| nitrogen-fixing NifU domain-containing protein [Myroides odoratus
DSM 2801]
gi|423324957|ref|ZP_17302798.1| hypothetical protein HMPREF9716_02155 [Myroides odoratimimus CIP
103059]
gi|373911270|gb|EHQ43119.1| nitrogen-fixing NifU domain-containing protein [Myroides odoratus
DSM 2801]
gi|404606966|gb|EKB06500.1| hypothetical protein HMPREF9716_02155 [Myroides odoratimimus CIP
103059]
Length = 299
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 82 VDLVLEDVRPYLIADGGNIDVVSVED--GVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
++++ E+V+P + ADGGNI + + VV V LQGAC CPSST T+ GIE +L+
Sbjct: 227 INILEENVKPAVQADGGNIAFQNYNEDTNVVQVILQGACSGCPSSTFTLKNGIENMLRHM 286
Query: 140 FGD 142
D
Sbjct: 287 LAD 289
>gi|17541876|ref|NP_501917.1| Protein LPD-8 [Caenorhabditis elegans]
gi|3879150|emb|CAA94609.1| Protein LPD-8 [Caenorhabditis elegans]
Length = 222
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
+RP + DGG+I V +DGVV +K+QG+C CPSS T+ GIE +L + +K++
Sbjct: 139 IRPMVQEDGGDITYVGFDDGVVKLKMQGSCTGCPSSGVTLKNGIENMLT-FYVPEVKEVI 197
Query: 149 QVYDE 153
+V DE
Sbjct: 198 EVKDE 202
>gi|46107542|ref|XP_380830.1| hypothetical protein FG00654.1 [Gibberella zeae PH-1]
Length = 304
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Query: 55 RASNPSAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVED-GVVSVK 113
R AP Y+ + ++ +L+ +RP + DGG+ID +D G V ++
Sbjct: 180 REGEAGAPVEEDSLAYNENDSEVVGMIKELLETRIRPAIQEDGGDIDFRGFDDEGYVHLR 239
Query: 114 LQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIRQVYDEE 154
L+GAC +C SST T+ GIE +L + + +K ++QV D+E
Sbjct: 240 LRGACRTCDSSTVTLKNGIEGMLMH-YIEEVKGVKQVMDQE 279
>gi|452752312|ref|ZP_21952055.1| NifU-like domain protein [alpha proteobacterium JLT2015]
gi|451960388|gb|EMD82801.1| NifU-like domain protein [alpha proteobacterium JLT2015]
Length = 186
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 7/74 (9%)
Query: 71 SAHQFDLTAKNVDL------VLED-VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPS 123
+A Q D ++ D+ +L+D VRP + DGG+I ++GVV +++QGAC CPS
Sbjct: 101 TAPQIDENEEDADIRRQITELLDDRVRPAVAGDGGDIVFHGFKEGVVYLRMQGACAGCPS 160
Query: 124 STTTMSMGIERVLK 137
ST T+ GIE +L+
Sbjct: 161 STATLKNGIENLLR 174
>gi|384214522|ref|YP_005605686.1| hypothetical protein BJ6T_08050 [Bradyrhizobium japonicum USDA 6]
gi|354953419|dbj|BAL06098.1| hypothetical protein BJ6T_08050 [Bradyrhizobium japonicum USDA 6]
Length = 189
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
DL+ VRP + DGG+I +DG+V + ++GAC CPSST T+ GI+ +LK D
Sbjct: 123 DLIETRVRPAVANDGGDITFRGFKDGIVYLNMKGACSGCPSSTATLQHGIQNLLKHFVPD 182
Query: 143 AIK 145
++
Sbjct: 183 VVE 185
>gi|316931562|ref|YP_004106544.1| Scaffold protein Nfu/NifU [Rhodopseudomonas palustris DX-1]
gi|315599276|gb|ADU41811.1| Scaffold protein Nfu/NifU [Rhodopseudomonas palustris DX-1]
Length = 188
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
DL+ VRP + DGG+I +DG+V + ++GAC CPSST T+ GI+ +LK
Sbjct: 121 DLIETRVRPAVANDGGDITFRGFKDGIVYLNMRGACAGCPSSTATLQHGIQNLLKH 176
>gi|426223400|ref|XP_004005863.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
[Ovis aries]
Length = 113
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 54 IRASNPSAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVK 113
+ PS AGS ++ A +L+ +RP + DGG++ EDG+V +K
Sbjct: 11 VTEETPSGEAGSE------DDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLK 64
Query: 114 LQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIRQVYDEEVRETTV 160
LQG+C SCPSS T+ GI+ +L+ + ++ + QV D+E E V
Sbjct: 65 LQGSCTSCPSSIITLKNGIQNMLQ-FYIPEVEGVEQVMDDESDEKEV 110
>gi|451979732|ref|ZP_21928144.1| putative Iron-sulfur cluster assembly scaffold protein SufE
[Nitrospina gracilis 3/211]
gi|451763011|emb|CCQ89341.1| putative Iron-sulfur cluster assembly scaffold protein SufE
[Nitrospina gracilis 3/211]
Length = 249
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 80 KNVDLVL-EDVRPYLIADGGNIDVVSVEDGV-VSVKLQGACGSCPSSTTTMSMGIERVLK 137
K V+LVL E VRP L++DGGNI V+ V DG V V+ QGACGSC SS IER L+
Sbjct: 177 KQVELVLDEKVRPALMSDGGNIQVLEVVDGERVLVQYQGACGSCGSSLGATLSFIERTLR 236
Query: 138 E 138
+
Sbjct: 237 Q 237
>gi|8118105|gb|AAF72894.1|AF228511_2 NU1 [Trypanosoma cruzi]
Length = 261
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 5/77 (6%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSV--EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE-- 138
+L+ E VRP + DGG++ +++ E GVVS+ + GAC +CPSS+ T+ GIERV+K
Sbjct: 138 ELLREQVRPMVQRDGGDVKLLNFNEETGVVSLAMLGACRTCPSSSNTLKDGIERVMKHFL 197
Query: 139 -KFGDAIKDIRQVYDEE 154
+ + ++D + EE
Sbjct: 198 PEVTEVVEDKGHAFYEE 214
>gi|387790899|ref|YP_006255964.1| thioredoxin-like protein [Solitalea canadensis DSM 3403]
gi|379653732|gb|AFD06788.1| thioredoxin-like protein [Solitalea canadensis DSM 3403]
Length = 186
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 80 KNVDLVLED-VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
K + +L D VRP + DGG I S ++GVV+V L+G+C CPSST T+ GIE +LK
Sbjct: 114 KKIQQILHDYVRPAVEQDGGAIHFKSYDEGVVTVVLKGSCSGCPSSTITLKAGIENLLK 172
>gi|373111093|ref|ZP_09525353.1| hypothetical protein HMPREF9712_02946 [Myroides odoratimimus CCUG
10230]
gi|423132425|ref|ZP_17120075.1| hypothetical protein HMPREF9714_03475 [Myroides odoratimimus CCUG
12901]
gi|423135895|ref|ZP_17123540.1| hypothetical protein HMPREF9715_03315 [Myroides odoratimimus CIP
101113]
gi|423329614|ref|ZP_17307420.1| hypothetical protein HMPREF9711_02994 [Myroides odoratimimus CCUG
3837]
gi|371639496|gb|EHO05112.1| hypothetical protein HMPREF9714_03475 [Myroides odoratimimus CCUG
12901]
gi|371639630|gb|EHO05245.1| hypothetical protein HMPREF9715_03315 [Myroides odoratimimus CIP
101113]
gi|371641154|gb|EHO06741.1| hypothetical protein HMPREF9712_02946 [Myroides odoratimimus CCUG
10230]
gi|404603242|gb|EKB02917.1| hypothetical protein HMPREF9711_02994 [Myroides odoratimimus CCUG
3837]
Length = 79
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDG-VVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+NV+ L+++RP+L ADGG+I ++ ++D VV V+L+GAC +C + T+S G+E +K+
Sbjct: 8 QNVEKALDEIRPFLQADGGDITLIDIQDDKVVQVRLEGACTACSVNQMTLSAGVETTIKK 67
>gi|344228223|gb|EGV60109.1| HIRA-interacting protein 5 [Candida tenuis ATCC 10573]
Length = 214
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSV--EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
+L+ +RP + DGG+I+ VS EDG V +KL+GAC SC SS+ T+ GIE +L+ +
Sbjct: 115 ELIFTRIRPAIQDDGGDIEFVSFDEEDGKVMLKLKGACRSCDSSSVTLKNGIESMLQ-YY 173
Query: 141 GDAIKDIRQVYDEEV 155
+ ++ + Q +EEV
Sbjct: 174 IEEVQSVEQFDEEEV 188
>gi|85714190|ref|ZP_01045179.1| nitrogen-fixing NifU [Nitrobacter sp. Nb-311A]
gi|85699316|gb|EAQ37184.1| nitrogen-fixing NifU [Nitrobacter sp. Nb-311A]
Length = 190
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
DL+ VRP + DGG+I +DGVV V ++GAC CPSST T+ GI+ +LK
Sbjct: 124 DLIETRVRPGVADDGGDITFRGFKDGVVYVNMKGACSGCPSSTVTLRNGIQNLLKH 179
>gi|1171712|sp|Q00241.1|NIFU_PLEBO RecName: Full=Nitrogen fixation protein NifU
gi|441182|dbj|BAA00567.1| NifU protein [Leptolyngbya boryana IAM M-101]
gi|228686|prf||1808318C nifU gene
Length = 205
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 52 TAIRASNPSAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVS 111
TA R + + A L + + L K +D E+VRP LIADGG++++ V+ V
Sbjct: 111 TAARIAAEISEAQIRKPLTNVQKIALIQKVLD---EEVRPVLIADGGDVELYDVDGDFVK 167
Query: 112 VKLQGACGSCPSSTTTMSMGIERVLK 137
V L+GACGSC SST T+ +E L+
Sbjct: 168 VTLKGACGSCASSTATLKDAVEAKLR 193
>gi|254295433|ref|YP_003061456.1| Scaffold protein Nfu/NifU [Hirschia baltica ATCC 49814]
gi|254043964|gb|ACT60759.1| Scaffold protein Nfu/NifU [Hirschia baltica ATCC 49814]
Length = 190
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 60 SAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNI--DVVSVEDGVVSVKLQGA 117
S PA +Y ++ A+ +L+ VRP + DGG+I + V+ GVV+++++GA
Sbjct: 97 SDPAPVEEVIYEGENAEIVAEIKELIETRVRPAVANDGGDIIFEKFDVDTGVVTLQMRGA 156
Query: 118 CGSCPSSTTTMSMGIERVLK 137
C CPSST T+ GIE +L+
Sbjct: 157 CAGCPSSTMTLKSGIENMLR 176
>gi|126725029|ref|ZP_01740872.1| nifU domain protein [Rhodobacterales bacterium HTCC2150]
gi|126706193|gb|EBA05283.1| nifU domain protein [Rhodobacteraceae bacterium HTCC2150]
Length = 187
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 62/113 (54%), Gaps = 9/113 (7%)
Query: 30 ERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFD--LTAKNVDLV 85
E ++ IKP ++++ S + + N +APA + +A++ D + + +L+
Sbjct: 67 ENSEWDHIKPAILGAIMEHFQSGQPVLSGEN-TAPAHAE----AANEEDKEIVGQIKELL 121
Query: 86 LEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
VRP + DGG+I + G+V + +QGAC CPSST T+ MGIE +L+
Sbjct: 122 DTRVRPAVAQDGGDITFHGFDRGIVYLHMQGACAGCPSSTLTLKMGIENLLRH 174
>gi|99078069|ref|YP_611327.1| nitrogen-fixing NifU-like [Ruegeria sp. TM1040]
gi|99035207|gb|ABF62065.1| nitrogen-fixing NifU-like protein [Ruegeria sp. TM1040]
Length = 187
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 29 NERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVDLVL 86
++ +++ IKP +V++ S + I A S ++ ++ + +L+
Sbjct: 66 DDSVEWDHIKPAVLGAVMEHYQSGQPVINEGQQQA---SGHAEHTGEDGEIVNQIKELLD 122
Query: 87 EDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
VRP + DGG+I + GVV + +QGAC CPSST T+ MGIE +L+
Sbjct: 123 SRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRH 174
>gi|452990514|emb|CCQ98304.1| Rieske (2Fe-2S) domain-containing protein [Clostridium ultunense
Esp]
Length = 284
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%)
Query: 81 NVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
V VLE+VRPY+ + GG++++V VE V V+LQGAC C S T+ G+E +K +
Sbjct: 93 RVAAVLEEVRPYMRSHGGDVELVKVEGETVYVRLQGACSGCYLSAVTLKNGVEEAIKARL 152
>gi|195357024|ref|XP_002044916.1| GM13534 [Drosophila sechellia]
gi|263505008|sp|B4IMF6.1|NFU1_DROSE RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|194124051|gb|EDW46094.1| GM13534 [Drosophila sechellia]
Length = 283
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
+RP + DGG+I + E GVV +K+QG+C SCPSS T+ G++ +L + + ++ +
Sbjct: 190 IRPTVQEDGGDIVFMGYEAGVVKLKMQGSCSSCPSSIVTLKNGVQNML-QFYIPEVESVE 248
Query: 149 QVYDEEVR 156
QV+DE R
Sbjct: 249 QVFDEADR 256
>gi|319409218|emb|CBI82862.1| NifU-related protein [Bartonella schoenbuchensis R1]
Length = 196
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
VRP + DGG+I EDG+V + ++GAC CPSST T+ GIE +L+
Sbjct: 130 VRPAVANDGGDITFRGFEDGIVYLNMRGACAGCPSSTATLKHGIENLLRH 179
>gi|195568040|ref|XP_002107563.1| GD15490 [Drosophila simulans]
gi|263505455|sp|B4R3T1.1|NFU1_DROSI RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|194204973|gb|EDX18549.1| GD15490 [Drosophila simulans]
Length = 283
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
+RP + DGG+I + E GVV +K+QG+C SCPSS T+ G++ +L + + ++ +
Sbjct: 190 IRPTVQEDGGDIVFMGYEAGVVKLKMQGSCSSCPSSIVTLKNGVQNML-QFYIPEVESVE 248
Query: 149 QVYDEEVR 156
QV+DE R
Sbjct: 249 QVFDEADR 256
>gi|421605891|ref|ZP_16047525.1| hypothetical protein BCCGELA001_42486 [Bradyrhizobium sp.
CCGE-LA001]
gi|404261999|gb|EJZ28045.1| hypothetical protein BCCGELA001_42486 [Bradyrhizobium sp.
CCGE-LA001]
Length = 136
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
DL+ VRP + DGG+I +DG+V + ++GAC CPSST T+ GI+ +LK D
Sbjct: 70 DLIETRVRPAVANDGGDITFRGFKDGIVYLNMKGACSGCPSSTATLQHGIQNLLKHFVPD 129
Query: 143 AIK 145
++
Sbjct: 130 VVE 132
>gi|383449702|ref|YP_005356423.1| hypothetical protein KQS_01870 [Flavobacterium indicum GPTSA100-9]
gi|380501324|emb|CCG52366.1| Protein of unknown function [Flavobacterium indicum GPTSA100-9]
Length = 298
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 73 HQFDLTAKNVDLVLED-VRPYLIADGGNIDVVSVED--GVVSVKLQGACGSCPSSTTTMS 129
D+T++ + +LE+ V+P + +DGGNI S ++ +V V LQGAC CPSST T+
Sbjct: 216 ENLDVTSQQIINILEEYVKPAVQSDGGNITFNSYDEQANIVKVTLQGACSGCPSSTFTLK 275
Query: 130 MGIERVLKEKFGD 142
GIE +L++ +
Sbjct: 276 NGIENMLRQMLNN 288
>gi|345868571|ref|ZP_08820554.1| NifU related protein [Bizionia argentinensis JUB59]
gi|344047082|gb|EGV42723.1| NifU related protein [Bizionia argentinensis JUB59]
Length = 300
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 76 DLTAKNVDLVLED-VRPYLIADGGNIDVVSVEDGVVSVK--LQGACGSCPSSTTTMSMGI 132
D T+K + +LE+ ++P + +DGGNI S +VK LQGAC CPSST T+ GI
Sbjct: 221 DDTSKEIITILEEYIKPAVASDGGNIQFESYNPDTKTVKVILQGACSGCPSSTITLKNGI 280
Query: 133 ERVLKE 138
E +LKE
Sbjct: 281 ENMLKE 286
>gi|359397922|ref|ZP_09190947.1| nitrogen-fixing NifU-like protein [Novosphingobium
pentaromativorans US6-1]
gi|357600808|gb|EHJ62502.1| nitrogen-fixing NifU-like protein [Novosphingobium
pentaromativorans US6-1]
Length = 192
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
D+ A+ DL+ VRP + DGG+I +G+V + +QGAC CPSST T+ GIE +
Sbjct: 119 DIVAQIKDLLETRVRPAVANDGGDIIYRGYREGIVYLAMQGACSGCPSSTATLKHGIESL 178
Query: 136 LKE 138
LK
Sbjct: 179 LKH 181
>gi|330922033|ref|XP_003299669.1| hypothetical protein PTT_10711 [Pyrenophora teres f. teres 0-1]
gi|311326592|gb|EFQ92266.1| hypothetical protein PTT_10711 [Pyrenophora teres f. teres 0-1]
Length = 243
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
VRP + DGG+I+ DG V +KL+GAC +C SST T+ GIE +L + + +K ++
Sbjct: 142 VRPAIQEDGGDIEFRGFNDGQVLLKLRGACRTCDSSTVTLKNGIESMLMH-YIEEVKGVQ 200
Query: 149 QVYDEE 154
QV D+E
Sbjct: 201 QVLDQE 206
>gi|386002991|ref|YP_005921290.1| Nitrogen-fixing NifU domain protein [Methanosaeta harundinacea 6Ac]
gi|357211047|gb|AET65667.1| Nitrogen-fixing NifU domain protein [Methanosaeta harundinacea 6Ac]
Length = 76
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V+ VLE +R L +GG+I++V V EDGVVSVKL G+C CP S T+ +ER LK+
Sbjct: 6 REVESVLEVIRNALRMEGGDIELVDVAEDGVVSVKLTGSCAGCPFSQMTLKNFVERELKK 65
Query: 139 KFGDAIKDI 147
D IK++
Sbjct: 66 NV-DGIKEV 73
>gi|115376684|ref|ZP_01463912.1| NifU domain protein [Stigmatella aurantiaca DW4/3-1]
gi|310823922|ref|YP_003956280.1| NIF system FeS cluster assembly, NifU family protein [Stigmatella
aurantiaca DW4/3-1]
gi|115366301|gb|EAU65308.1| NifU domain protein [Stigmatella aurantiaca DW4/3-1]
gi|309396994|gb|ADO74453.1| NIF system FeS cluster assembly, NifU family protein [Stigmatella
aurantiaca DW4/3-1]
Length = 187
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 42/63 (66%), Gaps = 4/63 (6%)
Query: 88 DVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDI 147
++RP + DGG+I + E+GVV + +QG+C CPSST T+ MGIE L+E AI ++
Sbjct: 126 EIRPAVAQDGGDITLDRYENGVVYLHMQGSCSGCPSSTATLKMGIEGRLRE----AIPEV 181
Query: 148 RQV 150
+V
Sbjct: 182 TEV 184
>gi|441498180|ref|ZP_20980381.1| NifU domain protein [Fulvivirga imtechensis AK7]
gi|441438087|gb|ELR71430.1| NifU domain protein [Fulvivirga imtechensis AK7]
Length = 193
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 78 TAKNVDLVLED-VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
T K + +L++ +RP + DGG I S +GVV V LQG+C CPSST T+ GIE +L
Sbjct: 119 TVKKIKGILDEYIRPAVEQDGGAIAFHSYHEGVVKVLLQGSCSGCPSSTVTLKAGIENLL 178
Query: 137 K 137
K
Sbjct: 179 K 179
>gi|365888602|ref|ZP_09427356.1| putative nifU protein (C-terminal fragment) [Bradyrhizobium sp. STM
3809]
gi|365335725|emb|CCD99887.1| putative nifU protein (C-terminal fragment) [Bradyrhizobium sp. STM
3809]
Length = 189
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
DL+ VRP + DGG+I +DG+V + ++GAC CPSST T+ GI+ +LK
Sbjct: 123 DLIESRVRPAVANDGGDITFRGFKDGIVYLNMKGACSGCPSSTATLQHGIQNLLKH 178
>gi|71666135|ref|XP_820030.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70885357|gb|EAN98179.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 261
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 5/77 (6%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSV--EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE-- 138
+L+ E VRP + DGG++ +++ E GVVS+ + GAC +CPSS+ T+ GIERV+K
Sbjct: 138 ELLREQVRPMVQRDGGDVKLLNFNEETGVVSLAMLGACRTCPSSSNTLKDGIERVMKHFL 197
Query: 139 -KFGDAIKDIRQVYDEE 154
+ + ++D + EE
Sbjct: 198 PEVTEVVEDKGHAFYEE 214
>gi|336364327|gb|EGN92687.1| hypothetical protein SERLA73DRAFT_190703 [Serpula lacrymans var.
lacrymans S7.3]
Length = 300
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVED-GVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFG 141
+L+ VRP ++ DGG+I+ + D G V +KL+G+C C SST T+ GIER+L
Sbjct: 196 ELLETRVRPAIMEDGGDIEYRGLSDEGFVKIKLKGSCRGCDSSTVTLKSGIERMLMHYIP 255
Query: 142 DAIKDIRQVYDEE 154
+ ++ + QV DEE
Sbjct: 256 E-VQGVEQVLDEE 267
>gi|146337209|ref|YP_001202257.1| hypothetical protein BRADO0035 [Bradyrhizobium sp. ORS 278]
gi|146190015|emb|CAL74007.1| putative nifU protein (C-terminal fragment) [Bradyrhizobium sp. ORS
278]
Length = 189
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
DL+ VRP + DGG+I +DG+V + ++GAC CPSST T+ GI+ +LK
Sbjct: 123 DLIESRVRPAVANDGGDITFRGFKDGIVYLNMKGACSGCPSSTATLQHGIQNLLKH 178
>gi|367478318|ref|ZP_09477630.1| putative nifU protein (C-terminal fragment) [Bradyrhizobium sp. ORS
285]
gi|365269371|emb|CCD90098.1| putative nifU protein (C-terminal fragment) [Bradyrhizobium sp. ORS
285]
Length = 189
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
DL+ VRP + DGG+I +DG+V + ++GAC CPSST T+ GI+ +LK
Sbjct: 123 DLIESRVRPAVANDGGDITFRGFKDGIVYLNMKGACSGCPSSTATLQHGIQNLLKH 178
>gi|148251664|ref|YP_001236249.1| NifU protein [Bradyrhizobium sp. BTAi1]
gi|146403837|gb|ABQ32343.1| putative nifU protein [Bradyrhizobium sp. BTAi1]
Length = 189
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
DL+ VRP + DGG+I +DG+V + ++GAC CPSST T+ GI+ +LK
Sbjct: 123 DLIESRVRPAVANDGGDITFRGFKDGIVYLNMKGACSGCPSSTATLQHGIQNLLKH 178
>gi|242277615|ref|YP_002989744.1| Fe-S cluster assembly protein NifU [Desulfovibrio salexigens DSM
2638]
gi|242120509|gb|ACS78205.1| Fe-S cluster assembly protein NifU [Desulfovibrio salexigens DSM
2638]
Length = 279
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 7/88 (7%)
Query: 51 ETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVV 110
E A A P PA L + +F L K +D E++RP L DGG+I+++ ++ V
Sbjct: 188 EAAKPAPEPEKPAK----LTNIKRFQLVTKVID---EEIRPALNKDGGDIELIDIDGHEV 240
Query: 111 SVKLQGACGSCPSSTTTMSMGIERVLKE 138
V L+GAC CPSS T+ +ER LKE
Sbjct: 241 IVSLRGACVGCPSSGRTLKDFVERRLKE 268
>gi|408490928|ref|YP_006867297.1| iron-sulfur cluster assembly protein NifU-like protein
[Psychroflexus torquis ATCC 700755]
gi|408468203|gb|AFU68547.1| iron-sulfur cluster assembly protein NifU-like protein
[Psychroflexus torquis ATCC 700755]
Length = 302
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 5/87 (5%)
Query: 54 IRASNPSAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVS--VEDGVVS 111
+++ AP SP + +++ D++ + V ++ E V+P + +DGGNI S E V
Sbjct: 205 VQSKKTEAP---SPEIDTSNLDDISKEIVQILEEYVKPAVASDGGNIMFKSYNAESKDVQ 261
Query: 112 VKLQGACGSCPSSTTTMSMGIERVLKE 138
V LQGAC CPSST T+ GIE +LKE
Sbjct: 262 VILQGACSGCPSSTITLKNGIESMLKE 288
>gi|385809243|ref|YP_005845639.1| thioredoxin-like protein [Ignavibacterium album JCM 16511]
gi|383801291|gb|AFH48371.1| Thioredoxin-like protein [Ignavibacterium album JCM 16511]
Length = 75
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 86 LEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVL 136
L +RP+L AD G++++V V +DG+V V+L GAC CP S T+ GIER L
Sbjct: 11 LNSIRPFLQADNGDVELVEVSQDGIVKVRLLGACEQCPLSVMTLRAGIERAL 62
>gi|365882787|ref|ZP_09421976.1| putative nifU protein (C-terminal fragment) [Bradyrhizobium sp. ORS
375]
gi|365288820|emb|CCD94507.1| putative nifU protein (C-terminal fragment) [Bradyrhizobium sp. ORS
375]
Length = 189
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
DL+ VRP + DGG+I +DG+V + ++GAC CPSST T+ GI+ +LK
Sbjct: 123 DLIESRVRPAVANDGGDITFRGFKDGIVYLNMKGACSGCPSSTATLQHGIQNLLKH 178
>gi|429206970|ref|ZP_19198230.1| nitrogen-fixing NifU domain protein [Rhodobacter sp. AKP1]
gi|428189965|gb|EKX58517.1| nitrogen-fixing NifU domain protein [Rhodobacter sp. AKP1]
Length = 186
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
D+ + +L+ VRP + DGG+I + G+V + +QGAC CPSST T+ MGIE +
Sbjct: 111 DVVRQIKELLDTRVRPAVAQDGGDITFHGFDRGIVYLHMQGACAGCPSSTLTLKMGIENL 170
Query: 136 LKE 138
L+
Sbjct: 171 LRH 173
>gi|372278137|ref|ZP_09514173.1| nitrogen-fixing NifU-like protein [Oceanicola sp. S124]
Length = 187
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 64 GSSPGLYSAH------QFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGA 117
G + G+ S H ++ + +L+ VRP + DGG+I + GVV + +QGA
Sbjct: 94 GGAEGVASGHAEHDGPDGEIVGQIKELLDTRVRPAVAQDGGDITFHGFDRGVVYLHMQGA 153
Query: 118 CGSCPSSTTTMSMGIERVLKE 138
C CPSST T+ MGIE +L+
Sbjct: 154 CAGCPSSTLTLKMGIENLLRH 174
>gi|126461658|ref|YP_001042772.1| NifU domain-containing protein [Rhodobacter sphaeroides ATCC 17029]
gi|221638629|ref|YP_002524891.1| nitrogen-fixing NifU domain-containing protein [Rhodobacter
sphaeroides KD131]
gi|126103322|gb|ABN76000.1| nitrogen-fixing NifU domain protein [Rhodobacter sphaeroides ATCC
17029]
gi|221159410|gb|ACM00390.1| Nitrogen-fixing NifU domain protein [Rhodobacter sphaeroides KD131]
Length = 186
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
D+ + +L+ VRP + DGG+I + G+V + +QGAC CPSST T+ MGIE +
Sbjct: 111 DVVRQIKELLDTRVRPAVAQDGGDITFHGFDRGIVYLHMQGACAGCPSSTLTLKMGIENL 170
Query: 136 LKE 138
L+
Sbjct: 171 LRH 173
>gi|259415063|ref|ZP_05738985.1| NifU domain protein [Silicibacter sp. TrichCH4B]
gi|259348973|gb|EEW60727.1| NifU domain protein [Silicibacter sp. TrichCH4B]
Length = 187
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+L+ VRP + DGG+I + GVV + +QGAC CPSST T+ MGIE +L+
Sbjct: 119 ELLDSRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRH 174
>gi|50593023|ref|NP_001002756.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform 3
[Homo sapiens]
gi|114577881|ref|XP_001137265.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 3 [Pan troglodytes]
gi|114577883|ref|XP_001137343.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 4 [Pan troglodytes]
gi|114577885|ref|XP_001137421.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 5 [Pan troglodytes]
gi|332226736|ref|XP_003262548.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 4 [Nomascus leucogenys]
gi|332226738|ref|XP_003262549.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 5 [Nomascus leucogenys]
gi|332226740|ref|XP_003262550.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 6 [Nomascus leucogenys]
gi|402891133|ref|XP_003908812.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 4 [Papio anubis]
gi|402891135|ref|XP_003908813.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 5 [Papio anubis]
gi|402891137|ref|XP_003908814.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 6 [Papio anubis]
Length = 113
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 7/104 (6%)
Query: 54 IRASNPSAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVK 113
+ PS AGS ++ A +L+ +RP + DGG++ EDG+V +K
Sbjct: 11 VTEETPSGEAGSE------EDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLK 64
Query: 114 LQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIRQVYDEEVRE 157
LQG+C SCPSS T+ GI+ +L+ + ++ + QV D+E E
Sbjct: 65 LQGSCTSCPSSIITLKNGIQNMLQ-FYIPEVEGVEQVMDDESDE 107
>gi|402493033|ref|ZP_10839789.1| Nitrogen-fixing NifU-like protein [Aquimarina agarilytica ZC1]
Length = 79
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 48/69 (69%), Gaps = 2/69 (2%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGV-VSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+NV+ LE++RP+L +DGG+I +V +E+G V V+LQGAC +C + T+ G+E +K
Sbjct: 8 ENVEKALEEIRPFLKSDGGDIRLVDIEEGKRVRVELQGACVACSVNQMTLRSGVEMTIK- 66
Query: 139 KFGDAIKDI 147
K+ I+++
Sbjct: 67 KYAPQIEEV 75
>gi|149202972|ref|ZP_01879943.1| nitrogen-fixing NifU-like protein [Roseovarius sp. TM1035]
gi|149143518|gb|EDM31554.1| nitrogen-fixing NifU-like protein [Roseovarius sp. TM1035]
Length = 187
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+L+ VRP + DGG+I + GVV + +QGAC CPSST T+ MGIE +L+
Sbjct: 119 ELLDTRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTITLKMGIENLLRH 174
>gi|13474434|ref|NP_106002.1| hypothetical protein mll5315 [Mesorhizobium loti MAFF303099]
gi|14025187|dbj|BAB51788.1| mll5315 [Mesorhizobium loti MAFF303099]
Length = 189
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
Query: 37 IKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVDLVLEDVRPYLI 94
+KP ++++ S + S P+A + Y +L +L+ VRP +
Sbjct: 74 LKPAILGAIMEHFMSGAPVMAKSGPAAETSQTGEFYDKADEELVITIKELLDTRVRPAVA 133
Query: 95 ADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIRQV 150
DGG+I E+G V + ++GAC CPSST T+ GI+ +L+ F ++ + QV
Sbjct: 134 QDGGDITFRGFENGTVFLHMKGACAGCPSSTATLKHGIQNLLRH-FVPEVQQVEQV 188
>gi|23006361|ref|ZP_00048716.1| COG0694: Thioredoxin-like proteins and domains [Magnetospirillum
magnetotacticum MS-1]
Length = 184
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 69 LYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTM 128
Y D A DL+ VRP + DGG+I DG+V ++++GAC CPSST T+
Sbjct: 104 FYDEADHDTVATIKDLLETRVRPAVAGDGGDITFRGYRDGIVYLEMKGACSGCPSSTATL 163
Query: 129 SMGIERVLKEKFGDAIKDIRQV 150
G++ + + F ++++++ V
Sbjct: 164 RQGVQNLFRH-FLPSVREVQAV 184
>gi|228472622|ref|ZP_04057382.1| nitrogen-fixing NifU domain protein [Capnocytophaga gingivalis ATCC
33624]
gi|228276035|gb|EEK14791.1| nitrogen-fixing NifU domain protein [Capnocytophaga gingivalis ATCC
33624]
Length = 299
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 76 DLTAKNVDLVLED-VRPYLIADGGNIDVVSV--EDGVVSVKLQGACGSCPSSTTTMSMGI 132
D+ +K + +L+ +RP + +DGGNI+ VS E V V LQGAC CPSS T+ GI
Sbjct: 219 DIYSKKIVALLDQYIRPAVSSDGGNIEFVSYDKETHKVKVVLQGACNGCPSSRITLKQGI 278
Query: 133 ERVLKEKFGD 142
E +L+E+ D
Sbjct: 279 EGLLREQLKD 288
>gi|188582635|ref|YP_001926080.1| Scaffold protein Nfu/NifU [Methylobacterium populi BJ001]
gi|179346133|gb|ACB81545.1| Scaffold protein Nfu/NifU [Methylobacterium populi BJ001]
Length = 188
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 69 LYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTM 128
Y D A DL+ VRP + DGG+I DG+V ++++GAC CPSST T+
Sbjct: 108 FYDEADHDTVATIKDLLETRVRPAVAGDGGDITFRGYRDGIVYLEMKGACSGCPSSTATL 167
Query: 129 SMGIERVLKEKFGDAIKDIRQV 150
G++ + + F ++++++ +
Sbjct: 168 RQGVQNLFRH-FLPSVREVQAI 188
>gi|408674919|ref|YP_006874667.1| nitrogen-fixing NifU domain-containing protein [Emticicia
oligotrophica DSM 17448]
gi|387856543|gb|AFK04640.1| nitrogen-fixing NifU domain-containing protein [Emticicia
oligotrophica DSM 17448]
Length = 82
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 5/72 (6%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V+ L VRPYL DGGN+ VV V ED ++L GACG+CP S+ T G+E E
Sbjct: 6 EKVENALNSVRPYLQTDGGNVRVVEVTEDLTAKIELLGACGTCPMSSMTFKAGLE----E 61
Query: 139 KFGDAIKDIRQV 150
A+ +I++V
Sbjct: 62 AILKAVPEIKKV 73
>gi|332557651|ref|ZP_08411973.1| Nitrogen-fixing NifU domain protein [Rhodobacter sphaeroides WS8N]
gi|332275363|gb|EGJ20678.1| Nitrogen-fixing NifU domain protein [Rhodobacter sphaeroides WS8N]
Length = 186
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
D+ + +L+ VRP + DGG+I + G+V + +QGAC CPSST T+ MGIE +
Sbjct: 111 DVVRQIKELLDTRVRPAVAQDGGDITFHGFDRGIVYLHMQGACAGCPSSTLTLKMGIENL 170
Query: 136 LKE 138
L+
Sbjct: 171 LRH 173
>gi|83949998|ref|ZP_00958731.1| nifU domain protein [Roseovarius nubinhibens ISM]
gi|83837897|gb|EAP77193.1| nifU domain protein [Roseovarius nubinhibens ISM]
Length = 188
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
VRP + DGG+I + GVV + +QGAC CPSST T+ MGIE +L+
Sbjct: 126 VRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTITLKMGIENLLRH 175
>gi|408370686|ref|ZP_11168461.1| NifU-like/thioredoxin-like protein [Galbibacter sp. ck-I2-15]
gi|407743923|gb|EKF55495.1| NifU-like/thioredoxin-like protein [Galbibacter sp. ck-I2-15]
Length = 79
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 81 NVDLVLEDVRPYLIADGGNIDVVSVEDG-VVSVKLQGACGSCPSSTTTMSMGIERVLK 137
NV+ LE++RP+L +DGGNI +VS++D V V+L+GAC C + T+ G+E +K
Sbjct: 9 NVEKALEEIRPFLESDGGNISLVSIDDNKFVKVRLEGACVGCSVNQMTLKTGVEMTIK 66
>gi|410074389|ref|XP_003954777.1| hypothetical protein KAFR_0A02040 [Kazachstania africana CBS 2517]
gi|372461359|emb|CCF55642.1| hypothetical protein KAFR_0A02040 [Kazachstania africana CBS 2517]
Length = 254
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVE--DGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
+L+ +RP ++ DGG+ID + G V +KLQGAC SC SS T+ GIE +LK +
Sbjct: 163 ELIDTRIRPAILEDGGDIDYRGWDPKTGTVYLKLQGACTSCSSSEVTLKYGIESMLKH-Y 221
Query: 141 GDAIKDIRQVYDEE 154
D +K++ Q+ D E
Sbjct: 222 VDEVKEVIQMLDPE 235
>gi|195392814|ref|XP_002055049.1| GJ19011 [Drosophila virilis]
gi|263505537|sp|B4M375.1|NFU1_DROVI RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|194149559|gb|EDW65250.1| GJ19011 [Drosophila virilis]
Length = 298
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
+RP + DGG+I + E+G+V +K+QG+C SCPSS T+ G++ +L + + ++ +
Sbjct: 198 IRPTVQEDGGDIVFMGYENGIVKLKMQGSCSSCPSSIVTLKNGVQNML-QFYIPEVESVE 256
Query: 149 QVYDE 153
QV+D+
Sbjct: 257 QVFDD 261
>gi|77462766|ref|YP_352270.1| nitrogen-fixing NifU [Rhodobacter sphaeroides 2.4.1]
gi|77387184|gb|ABA78369.1| Nitrogen-fixing NifU [Rhodobacter sphaeroides 2.4.1]
Length = 186
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
D+ + +L+ VRP + DGG+I + G+V + +QGAC CPSST T+ MGIE +
Sbjct: 111 DVVRQIKELLDTRVRPAVAQDGGDITFHGFDRGIVYLHMQGACAGCPSSTLTLKMGIENL 170
Query: 136 LKE 138
L+
Sbjct: 171 LRH 173
>gi|407397419|gb|EKF27733.1| hypothetical protein MOQ_008533 [Trypanosoma cruzi marinkellei]
Length = 282
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSV--EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+L+ E VRP + DGG++ +++ E GVVS+ + GAC +CPSS+ T+ GIERV+K
Sbjct: 159 ELLREQVRPMVQQDGGDVKLLNFNEETGVVSLAMLGACRTCPSSSNTLKDGIERVMKH 216
>gi|302335395|ref|YP_003800602.1| nitrogen-fixing NifU domain-containing protein [Olsenella uli DSM
7084]
gi|301319235|gb|ADK67722.1| nitrogen-fixing NifU domain protein [Olsenella uli DSM 7084]
Length = 85
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 86 LEDVRPYLIADGGNIDVVSVED-GVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
L+ +R L ADGG++ +V D GVV++++QGAC CP S+ MS GIER+LKE
Sbjct: 18 LDVIRQSLQADGGDVALVGFNDEGVVTLEMQGACAGCPLSSLDMSEGIERILKE 71
>gi|213962175|ref|ZP_03390439.1| nitrogen-fixing NifU domain protein [Capnocytophaga sputigena
Capno]
gi|213955181|gb|EEB66499.1| nitrogen-fixing NifU domain protein [Capnocytophaga sputigena
Capno]
Length = 300
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGV--VSVKLQGACGSCPSSTTTMSMGIE 133
+++ + V ++ + V+P + +DGGNI +S V V LQGAC CPSST T+ GIE
Sbjct: 223 EISQQIVAIIEQYVKPAVASDGGNIQFISYNRDTHHVEVLLQGACSGCPSSTQTLKKGIE 282
Query: 134 RVLKEKFGDAIKDI 147
+LK+K + + ++
Sbjct: 283 VILKDKLNNPLINV 296
>gi|407787731|ref|ZP_11134870.1| hypothetical protein B30_16838 [Celeribacter baekdonensis B30]
gi|407199010|gb|EKE69034.1| hypothetical protein B30_16838 [Celeribacter baekdonensis B30]
Length = 187
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
VRP + DGG+I + G+V + +QGAC CPSST T+ MGIE +L+
Sbjct: 125 VRPAVAQDGGDITFHGFDRGIVYLHMQGACAGCPSSTLTLKMGIENLLRH 174
>gi|17946069|gb|AAL49077.1| RE53788p [Drosophila melanogaster]
Length = 134
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
+RP + DGG+I + E GVV +K+QG+C SCPSS T+ G++ +L+ + ++ +
Sbjct: 41 IRPTVQEDGGDIVFMGYEGGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQ-FYIPEVESVE 99
Query: 149 QVYDEEVR 156
QV+DE R
Sbjct: 100 QVFDEADR 107
>gi|288574803|ref|ZP_06393160.1| nitrogen-fixing NifU domain protein [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288570544|gb|EFC92101.1| nitrogen-fixing NifU domain protein [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 77
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSV--EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
++V + +RP L + GG+++VVS E GV+S +LQGACG+CP + T+ M +E VLK +
Sbjct: 9 EVVDKSIRPALQSHGGDVEVVSFDEESGVISARLQGACGTCPFAQETLRMQVEAVLKREI 68
>gi|50419691|ref|XP_458373.1| DEHA2C15796p [Debaryomyces hansenii CBS767]
gi|49654039|emb|CAG86455.1| DEHA2C15796p [Debaryomyces hansenii CBS767]
Length = 246
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 3/77 (3%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSV--EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
+L+ +RP + DGG+I+ VS ++G V ++L+GAC SC SS+ T+ GIE +LK +
Sbjct: 148 ELIFTRIRPAIQDDGGDIEFVSFAEDNGTVYLRLKGACRSCDSSSVTLKNGIESMLK-YY 206
Query: 141 GDAIKDIRQVYDEEVRE 157
+ + + QV DE+ E
Sbjct: 207 IEEVTTVEQVNDEDTTE 223
>gi|21430120|gb|AAM50738.1| GM32035p [Drosophila melanogaster]
Length = 104
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
+RP + DGG+I + E GVV +K+QG+C SCPSS T+ G++ +L + + ++ +
Sbjct: 11 IRPTVQEDGGDIVFMGYEGGVVKLKMQGSCSSCPSSIVTLKNGVQNML-QFYIPEVESVE 69
Query: 149 QVYDEEVR 156
QV+DE R
Sbjct: 70 QVFDEADR 77
>gi|254474955|ref|ZP_05088341.1| NifU domain protein [Ruegeria sp. R11]
gi|214029198|gb|EEB70033.1| NifU domain protein [Ruegeria sp. R11]
Length = 187
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+L+ VRP + DGG+I + GVV + +QGAC CPSST T+ MGIE +L+
Sbjct: 119 ELLDSRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRH 174
>gi|373956925|ref|ZP_09616885.1| Scaffold protein Nfu/NifU [Mucilaginibacter paludis DSM 18603]
gi|373893525|gb|EHQ29422.1| Scaffold protein Nfu/NifU [Mucilaginibacter paludis DSM 18603]
Length = 182
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 82 VDLVLED-VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
+ +L+D VRP + DGG I S +GVV+V+L+G+C CPSST T+ GIE +LK
Sbjct: 112 IQQILQDYVRPAVEQDGGAITYKSFNEGVVTVELRGSCSGCPSSTITLKSGIENLLK 168
>gi|91974729|ref|YP_567388.1| nitrogen-fixing NifU-like protein [Rhodopseudomonas palustris
BisB5]
gi|91681185|gb|ABE37487.1| nitrogen-fixing NifU-like [Rhodopseudomonas palustris BisB5]
Length = 188
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
DL+ VRP + DGG+I +DGVV + ++GAC CPSST T+ GI+ +LK
Sbjct: 122 DLIETRVRPAVANDGGDITFRGFKDGVVYLAMKGACSGCPSSTATLQHGIQNLLKH 177
>gi|440635801|gb|ELR05720.1| hypothetical protein GMDG_07563 [Geomyces destructans 20631-21]
Length = 319
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 70 YSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMS 129
Y+ + ++ +L+ +RP + DGG+ID E G V +KL+GAC +C SST T+
Sbjct: 199 YNENDSEVVGMIKELLETRIRPAIQEDGGDIDFKGFEGGNVLLKLRGACRTCDSSTVTLK 258
Query: 130 MGIERVLKEKFGDAIKDIRQVYDEE 154
GIE +L + + +K + QV D+E
Sbjct: 259 NGIEGMLMH-YIEEVKGVVQVVDQE 282
>gi|11498240|ref|NP_069466.1| NifU protein [Archaeoglobus fulgidus DSM 4304]
gi|2649997|gb|AAB90617.1| nifU protein (nifU-3) [Archaeoglobus fulgidus DSM 4304]
Length = 77
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Query: 77 LTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQ--GACGSCPSSTTTMSMGIER 134
L K ++V +D+RP L+ DGGNI VV V++G +VK+Q GACG CP S T++ +ER
Sbjct: 3 LREKVEEVVEKDIRPALMRDGGNIAVVDVDEGSGTVKVQLLGACGGCPMSMITLTSFVER 62
Query: 135 VLK 137
L+
Sbjct: 63 YLR 65
>gi|399991613|ref|YP_006571853.1| nitrogen fixation protein nifU-like protein [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
gi|400753252|ref|YP_006561620.1| nitrogen fixation protein nifU-like protein [Phaeobacter
gallaeciensis 2.10]
gi|398652405|gb|AFO86375.1| nitrogen fixation protein nifU-like protein [Phaeobacter
gallaeciensis 2.10]
gi|398656168|gb|AFO90134.1| nitrogen fixation protein nifU-like protein [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
Length = 187
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+L+ VRP + DGG+I + GVV + +QGAC CPSST T+ MGIE +L+
Sbjct: 119 ELLDSRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRH 174
>gi|442323584|ref|YP_007363605.1| NifU family protein [Myxococcus stipitatus DSM 14675]
gi|441491226|gb|AGC47921.1| NifU family protein [Myxococcus stipitatus DSM 14675]
Length = 188
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 36/51 (70%)
Query: 88 DVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
++RP + DGG+I + EDG+V + ++G+C CPSST T+ MGIE L+E
Sbjct: 127 EIRPAVAMDGGDITLDRFEDGIVYLHMKGSCAGCPSSTATLKMGIEGRLRE 177
>gi|126730479|ref|ZP_01746290.1| nifU domain protein [Sagittula stellata E-37]
gi|126709212|gb|EBA08267.1| nifU domain protein [Sagittula stellata E-37]
Length = 187
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
VRP + DGG+I + GVV + +QGAC CPSST T+ MGIE +L+
Sbjct: 125 VRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRH 174
>gi|308234420|ref|ZP_07665157.1| nitrogen-fixing NifU domain protein [Atopobium vaginae DSM 15829]
gi|328944265|ref|ZP_08241729.1| YhgI protein [Atopobium vaginae DSM 15829]
gi|327491184|gb|EGF22959.1| YhgI protein [Atopobium vaginae DSM 15829]
Length = 189
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 82 VDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
++ L+ +R L ADGG+I +V+V +DGVV++ + GAC CP S MS G+ER+LKE
Sbjct: 118 LEATLDVIRESLQADGGDIVLVNVSDDGVVTLDMVGACAGCPMSAYDMSEGVERILKEHV 177
Query: 141 GDAIK 145
+K
Sbjct: 178 PGVVK 182
>gi|340027770|ref|ZP_08663833.1| NifU domain-containing protein [Paracoccus sp. TRP]
Length = 184
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 9/87 (10%)
Query: 71 SAHQFDLTAKNVDLV-----LED--VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPS 123
SAH D T + ++V L D VRP + DGG+I + GVV + +QGAC CPS
Sbjct: 99 SAHN-DQTGPDAEIVNQIKELLDTRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPS 157
Query: 124 STTTMSMGIERVLKEKFGDAIKDIRQV 150
ST T+ MGIE +L+ + + ++R V
Sbjct: 158 STLTLKMGIENLLRHYIPE-VTEVRPV 183
>gi|452987593|gb|EME87348.1| hypothetical protein MYCFIDRAFT_148025 [Pseudocercospora fijiensis
CIRAD86]
Length = 321
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
+L+ +RP + DGG+I+ DG V +KL+GAC +C SST T+ GIE +L + +
Sbjct: 218 ELLETRIRPAIQEDGGDIEFRGFHDGQVMLKLRGACRTCDSSTVTLKNGIESMLMH-YIE 276
Query: 143 AIKDIRQVYDEE 154
+K ++QV D E
Sbjct: 277 EVKGVQQVMDPE 288
>gi|254455619|ref|ZP_05069048.1| nitrogen-fixing NifU domain protein [Candidatus Pelagibacter sp.
HTCC7211]
gi|207082621|gb|EDZ60047.1| nitrogen-fixing NifU domain protein [Candidatus Pelagibacter sp.
HTCC7211]
Length = 179
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 40/61 (65%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
++ K V ++ + +RP + DGG+I +DGVV V+LQG+C CPSST T+ G++ +
Sbjct: 106 EIEQKIVKILDQKIRPAVARDGGDIKFKEFKDGVVKVQLQGSCSGCPSSTMTLKQGVQNL 165
Query: 136 L 136
L
Sbjct: 166 L 166
>gi|86747711|ref|YP_484207.1| nitrogen-fixing NifU-like [Rhodopseudomonas palustris HaA2]
gi|86570739|gb|ABD05296.1| Nitrogen-fixing NifU-like [Rhodopseudomonas palustris HaA2]
Length = 188
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
DL+ VRP + DGG+I +DG+V + ++GAC CPSST T+ GI+ +LK
Sbjct: 122 DLIETRVRPAVANDGGDITFRGFKDGIVYLAMKGACSGCPSSTATLQHGIQNLLKH 177
>gi|443243509|ref|YP_007376734.1| NifU-like domain protein [Nonlabens dokdonensis DSW-6]
gi|442800908|gb|AGC76713.1| NifU-like domain protein [Nonlabens dokdonensis DSW-6]
Length = 303
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVED--GVVSVKLQGACGSCPSSTTTMSMGIE 133
D++ K V+++ E ++P + +DGGNI E+ G V V LQGAC CPSST T+ GIE
Sbjct: 225 DVSKKIVEILDEYIKPAVASDGGNIVFEGYEESNGEVRVILQGACSGCPSSTMTLRNGIE 284
Query: 134 RVLKE 138
+LK+
Sbjct: 285 TMLKD 289
>gi|317154501|ref|YP_004122549.1| nitrogen-fixing NifU domain-containing protein [Desulfovibrio
aespoeensis Aspo-2]
gi|316944752|gb|ADU63803.1| nitrogen-fixing NifU domain protein [Desulfovibrio aespoeensis
Aspo-2]
Length = 74
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 85 VLEDVRPYLIADGGNIDVVSVED-GVVSVKLQGACGSCPSSTTTMSMGIER-VLKE 138
VL+ VRP L DGG++++V + D G+V V+L GAC CP S T+ GIER +LKE
Sbjct: 8 VLDKVRPALQGDGGDVELVDITDKGIVQVRLTGACKGCPMSQMTLKNGIERIILKE 63
>gi|154245767|ref|YP_001416725.1| scaffold protein Nfu/NifU [Xanthobacter autotrophicus Py2]
gi|154159852|gb|ABS67068.1| Scaffold protein Nfu/NifU [Xanthobacter autotrophicus Py2]
Length = 186
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%)
Query: 69 LYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTM 128
Y A ++ A +L+ VRP + DGG+I +DG+V + ++G+C CPSST T+
Sbjct: 106 FYEAKDAEIVATIKELLDTRVRPAVANDGGDITFRGFKDGIVFLNMKGSCSGCPSSTATL 165
Query: 129 SMGIERVLKE 138
GIE +LK
Sbjct: 166 KNGIENLLKH 175
>gi|119383283|ref|YP_914339.1| NifU domain-containing protein [Paracoccus denitrificans PD1222]
gi|119373050|gb|ABL68643.1| nitrogen-fixing NifU domain protein [Paracoccus denitrificans
PD1222]
Length = 184
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
VRP + DGG+I + GVV + +QGAC CPSST T+ MGIE +L+ + + ++R
Sbjct: 123 VRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPE-VTEVR 181
Query: 149 QV 150
V
Sbjct: 182 PV 183
>gi|15604511|ref|NP_221029.1| hypothetical protein RP667 [Rickettsia prowazekii str. Madrid E]
gi|383486656|ref|YP_005404336.1| hypothetical protein MA5_00270 [Rickettsia prowazekii str. GvV257]
gi|383488064|ref|YP_005405743.1| hypothetical protein M9W_03200 [Rickettsia prowazekii str.
Chernikova]
gi|383488909|ref|YP_005406587.1| hypothetical protein M9Y_03205 [Rickettsia prowazekii str.
Katsinyian]
gi|383489749|ref|YP_005407426.1| hypothetical protein MA3_03240 [Rickettsia prowazekii str. Dachau]
gi|383499889|ref|YP_005413250.1| hypothetical protein MA1_03195 [Rickettsia prowazekii str.
BuV67-CWPP]
gi|383500726|ref|YP_005414086.1| hypothetical protein MA7_03195 [Rickettsia prowazekii str. RpGvF24]
gi|386082530|ref|YP_005999108.1| NifU-like protein [Rickettsia prowazekii str. Rp22]
gi|3861205|emb|CAA15105.1| unknown [Rickettsia prowazekii str. Madrid E]
gi|292572295|gb|ADE30210.1| NifU-like protein [Rickettsia prowazekii str. Rp22]
gi|380757021|gb|AFE52258.1| hypothetical protein MA5_00270 [Rickettsia prowazekii str. GvV257]
gi|380758423|gb|AFE53659.1| hypothetical protein MA7_03195 [Rickettsia prowazekii str. RpGvF24]
gi|380760943|gb|AFE49465.1| hypothetical protein M9W_03200 [Rickettsia prowazekii str.
Chernikova]
gi|380761788|gb|AFE50309.1| hypothetical protein M9Y_03205 [Rickettsia prowazekii str.
Katsinyian]
gi|380762635|gb|AFE51155.1| hypothetical protein MA1_03195 [Rickettsia prowazekii str.
BuV67-CWPP]
gi|380763472|gb|AFE51991.1| hypothetical protein MA3_03240 [Rickettsia prowazekii str. Dachau]
Length = 190
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 73 HQFDLTAKNVDLVLED----VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTM 128
H D+ ++ ++E VRP++ DGG+I E GVV + L+GAC CPSST T+
Sbjct: 105 HNLDMLSEIEKQIIETIETRVRPFVTQDGGDIIYKGFESGVVKLALRGACLGCPSSTITL 164
Query: 129 SMGIERVLKEKFGDAIKDIRQVYDE 153
GIE +LK F +++++ V ++
Sbjct: 165 KNGIESMLKH-FIPEVQEVKAVEED 188
>gi|433647289|ref|YP_007292291.1| thioredoxin-like protein [Mycobacterium smegmatis JS623]
gi|433297066|gb|AGB22886.1| thioredoxin-like protein [Mycobacterium smegmatis JS623]
Length = 296
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
+ V L+ VRPYL + GG++ ++ V DGVV ++ QG+C +CPSS+ T+ + +E ++
Sbjct: 98 RRVSDALDSVRPYLGSHGGDVSLLGVADGVVRLQFQGSCKTCPSSSVTLELAVEDAVRAA 157
Query: 140 FGDAIKDIRQVYDEEVRETTV 160
+ I I V E V ++V
Sbjct: 158 APE-ITSIEVVAAENVSTSSV 177
>gi|89900651|ref|YP_523122.1| nitrogen-fixing NifU-like protein [Rhodoferax ferrireducens T118]
gi|89345388|gb|ABD69591.1| nitrogen-fixing NifU-like [Rhodoferax ferrireducens T118]
Length = 186
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 58/93 (62%), Gaps = 10/93 (10%)
Query: 54 IRASNPSAPAGSSPGLYSA--HQFDLTAKN------VDLVL-EDVRPYLIADGGNIDVVS 104
+RA+ P+A S+ ++ A H DL+A++ ++L+L +++RPYL +DGG++ ++
Sbjct: 84 LRAA-PAASEQSAAAVFEARAHVADLSAQDRQRLDDIELILDQEIRPYLQSDGGDLHILG 142
Query: 105 VEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
+ + V QGACG+CPS+ + GIE L+
Sbjct: 143 LAGNQLIVHYQGACGTCPSAISGTLQGIESRLR 175
>gi|399027730|ref|ZP_10729186.1| thioredoxin-like protein [Flavobacterium sp. CF136]
gi|398074782|gb|EJL65918.1| thioredoxin-like protein [Flavobacterium sp. CF136]
Length = 79
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 81 NVDLVLEDVRPYLIADGGNIDVVSVEDGV-VSVKLQGACGSCPSSTTTMSMGIERVLKE 138
NV L LE++RP+L +DGG+I ++S+ED V V+L+GAC SC + T+ G+E +K+
Sbjct: 9 NVLLALEEIRPFLNSDGGDITLISIEDDKHVKVRLEGACISCSVNQMTLKAGVETTIKK 67
>gi|193215039|ref|YP_001996238.1| nitrogen-fixing NifU domain-containing protein [Chloroherpeton
thalassium ATCC 35110]
gi|193088516|gb|ACF13791.1| nitrogen-fixing NifU domain protein [Chloroherpeton thalassium ATCC
35110]
Length = 95
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 86 LEDVRPYLIADGGNIDVVSVED-GVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAI 144
L +RPYL ADGG+ ++V + D VV ++L GACGSCP S T+ G+E+ +K + +
Sbjct: 30 LNSIRPYLQADGGDCELVGITDEQVVDLRLVGACGSCPMSAMTLRAGVEQAIKRAVPEIV 89
Query: 145 K 145
+
Sbjct: 90 R 90
>gi|224373701|ref|YP_002608073.1| NifU family protein [Nautilia profundicola AmH]
gi|223588484|gb|ACM92220.1| NifU family protein [Nautilia profundicola AmH]
Length = 98
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 85 VLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKF 140
VL++VRP L DGG++ ++ V +V V+LQG C C S+ T+ GIE+ LKEK
Sbjct: 18 VLDEVRPMLQMDGGDVTLIDVRKPIVFVQLQGGCVGCASAGATLKYGIEKALKEKI 73
>gi|406660704|ref|ZP_11068833.1| Fe/S biogenesis protein nfuA [Cecembia lonarensis LW9]
gi|405555429|gb|EKB50459.1| Fe/S biogenesis protein nfuA [Cecembia lonarensis LW9]
Length = 82
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 80 KNVDLVLEDVRPYLIADGGNIDVVSV-EDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
+ V+ L +RPYL ADGGN+ +V + +D ++ ++L G C SCP S+ T+ G+E +K
Sbjct: 7 EKVEKALNSIRPYLEADGGNVKIVEITDDMILRLELTGTCSSCPMSSMTLKAGVEEAIKR 66
Query: 139 KFGDAIK 145
+ +K
Sbjct: 67 DIPEIVK 73
>gi|220924300|ref|YP_002499602.1| Scaffold protein Nfu/NifU [Methylobacterium nodulans ORS 2060]
gi|219948907|gb|ACL59299.1| Scaffold protein Nfu/NifU [Methylobacterium nodulans ORS 2060]
Length = 187
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 65/127 (51%), Gaps = 5/127 (3%)
Query: 26 TKFNERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVD 83
TK + ++ +KP ++++ S + A +A G+S + D A D
Sbjct: 64 TKAEDGPEWPQVKPAVLGAIMEHFLSGAPVLEAG--AAGEGTSEEFFEEADADTVATIKD 121
Query: 84 LVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDA 143
L+ VRP + DGG+I +GVV ++++GAC CPSST T+ G++ + + F
Sbjct: 122 LLETRVRPAVAGDGGDITFRGYREGVVYLEMKGACSGCPSSTATLRQGVQNLFR-HFLPE 180
Query: 144 IKDIRQV 150
+++++ V
Sbjct: 181 VREVQSV 187
>gi|386399266|ref|ZP_10084044.1| thioredoxin-like protein [Bradyrhizobium sp. WSM1253]
gi|385739892|gb|EIG60088.1| thioredoxin-like protein [Bradyrhizobium sp. WSM1253]
Length = 189
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
DL+ VRP + DGG+I +DG+V + ++G+C CPSST T+ GI+ +LK D
Sbjct: 123 DLIETRVRPAVANDGGDITFRGFKDGIVYLNMKGSCAGCPSSTATLQHGIQNLLKHFVPD 182
Query: 143 AIK 145
++
Sbjct: 183 VVE 185
>gi|196003412|ref|XP_002111573.1| hypothetical protein TRIADDRAFT_55734 [Trichoplax adhaerens]
gi|190585472|gb|EDV25540.1| hypothetical protein TRIADDRAFT_55734 [Trichoplax adhaerens]
Length = 236
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
D A +L+ +RP L DGG+I + ++G+V +K+QGAC SCPS+T T+ GI+ +
Sbjct: 146 DTVAMIKELLETRIRPTLQEDGGDIVYMGYDNGIVKLKMQGACDSCPSATVTLKHGIQNM 205
Query: 136 LK 137
L+
Sbjct: 206 LQ 207
>gi|405971247|gb|EKC36093.1| NFU1 iron-sulfur cluster scaffold-like protein, mitochondrial
[Crassostrea gigas]
gi|405971248|gb|EKC36094.1| NFU1 iron-sulfur cluster scaffold-like protein, mitochondrial
[Crassostrea gigas]
Length = 210
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 9/84 (10%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK---------EK 139
+RP + DGG+I + EDG+V +K+QG+C SCPSS T+ G++ +L+ E+
Sbjct: 124 IRPTVQEDGGDIVYMGFEDGIVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPEVMGVEQ 183
Query: 140 FGDAIKDIRQVYDEEVRETTVEVS 163
D + D+ + E++ ++ E S
Sbjct: 184 IEDEVDDVNKTEFEKLEKSLEEKS 207
>gi|374571694|ref|ZP_09644790.1| thioredoxin-like protein [Bradyrhizobium sp. WSM471]
gi|374420015|gb|EHQ99547.1| thioredoxin-like protein [Bradyrhizobium sp. WSM471]
Length = 189
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
DL+ VRP + DGG+I +DG+V + ++G+C CPSST T+ GI+ +LK D
Sbjct: 123 DLIETRVRPAVANDGGDITFRGFKDGIVYLNMKGSCAGCPSSTATLQHGIQNLLKHFVPD 182
Query: 143 AIK 145
++
Sbjct: 183 VVE 185
>gi|336378291|gb|EGO19449.1| hypothetical protein SERLADRAFT_401751 [Serpula lacrymans var.
lacrymans S7.9]
Length = 250
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 89 VRPYLIADGGNIDVVSVED-GVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDI 147
VRP ++ DGG+I+ + D G V +KL+G+C C SST T+ GIER+L + ++ +
Sbjct: 159 VRPAIMEDGGDIEYRGLSDEGFVKIKLKGSCRGCDSSTVTLKSGIERMLMHYIPE-VQGV 217
Query: 148 RQVYDEE 154
QV DEE
Sbjct: 218 EQVLDEE 224
>gi|426404273|ref|YP_007023244.1| nifU related protein [Bdellovibrio bacteriovorus str. Tiberius]
gi|425860941|gb|AFY01977.1| nifU related protein [Bdellovibrio bacteriovorus str. Tiberius]
Length = 186
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 79 AKNVDLVLE-DVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
A+N+ VL ++RP + DGG+I E+ V+ + ++GAC CPSST T+ GIE +K
Sbjct: 115 ARNIKSVLNREIRPVVALDGGDIVFHKYENNVLYIHMKGACSGCPSSTVTLKEGIEVRMK 174
Query: 138 EKFGDAIK 145
E F + I+
Sbjct: 175 ELFPEIIE 182
>gi|212702241|ref|ZP_03310369.1| hypothetical protein DESPIG_00252 [Desulfovibrio piger ATCC 29098]
gi|212674304|gb|EEB34787.1| Fe-S cluster assembly protein NifU [Desulfovibrio piger ATCC 29098]
Length = 260
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 65 SSPGLYSAHQFDLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSS 124
S P + + + L K ++ E++RP L ADGG+I++V V+ V V L+G C C SS
Sbjct: 179 SKPRMTNVQRMQLVMKTIE---EEIRPQLAADGGDIELVDVDGKRVVVSLRGRCAQCRSS 235
Query: 125 TTTMSMGIERVLKE 138
T+ +ERVL+E
Sbjct: 236 EVTIRNLVERVLRE 249
>gi|443733606|gb|ELU17898.1| hypothetical protein CAPTEDRAFT_18536 [Capitella teleta]
Length = 207
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 18/141 (12%)
Query: 26 TKFNERLQFISIKPK--NSVLQKSGSHETAIRASNPSAPAGSSPGLYSAHQFDLTAKNVD 83
TK +ER+ + +KP+ ++ S + I P A F+ + V
Sbjct: 64 TKVDERVDWQILKPEIFAVIMDFFASGQPVITGEPPPA---------DTEVFEDDDETVA 114
Query: 84 LVLE----DVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEK 139
++ E +RP + DGG+I + E+G+V +K+QG+C SCPSS T+ G++ +L+
Sbjct: 115 MIKELLDTRIRPTVQEDGGDIVFMGFEEGIVRLKMQGSCTSCPSSVVTLKSGVQNMLQFY 174
Query: 140 FGDAIKDIRQVYDE--EVRET 158
+ + + QV DE E+ ET
Sbjct: 175 IPEVLG-VEQVQDETDEIAET 194
>gi|383768305|ref|YP_005447368.1| hypothetical protein S23_00280 [Bradyrhizobium sp. S23321]
gi|381356426|dbj|BAL73256.1| hypothetical protein S23_00280 [Bradyrhizobium sp. S23321]
Length = 189
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGD 142
DL+ VRP + DGG+I +DG+V + ++G+C CPSST T+ GI+ +LK D
Sbjct: 123 DLIETRVRPAVANDGGDITFRGFKDGIVYLNMKGSCAGCPSSTATLQHGIQNLLKHFVPD 182
Query: 143 AIK 145
++
Sbjct: 183 VVE 185
>gi|365876397|ref|ZP_09415919.1| Nitrogen-fixing NifU [Elizabethkingia anophelis Ag1]
gi|442589703|ref|ZP_21008510.1| Nitrogen-fixing NifU [Elizabethkingia anophelis R26]
gi|365756009|gb|EHM97926.1| Nitrogen-fixing NifU [Elizabethkingia anophelis Ag1]
gi|442560591|gb|ELR77819.1| Nitrogen-fixing NifU [Elizabethkingia anophelis R26]
Length = 81
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 43/63 (68%)
Query: 86 LEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIK 145
LE++RP+L DGG+I+++ V++ V V+L G C SC +T+T+ +G+E +K+ + ++
Sbjct: 17 LEEIRPFLNKDGGDIELIDVKENTVIVRLLGNCSSCHINTSTLKLGVENTIKQHVPEIVE 76
Query: 146 DIR 148
I
Sbjct: 77 VIN 79
>gi|453331572|dbj|GAC86486.1| NifU protein [Gluconobacter thailandicus NBRC 3255]
Length = 205
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERV 135
D+ + DL+ VRP + DGG+I +DGVV + +QGAC CPSS T+ G+E +
Sbjct: 130 DVVVRIRDLLDTRVRPAVAGDGGDIAFRGYKDGVVYLTMQGACSGCPSSRATLKHGVENM 189
Query: 136 LKEKFGDAIKDIRQVYD 152
L+ + ++ + QV D
Sbjct: 190 LRH-YVPEVQSVEQVED 205
>gi|381167639|ref|ZP_09876846.1| putative nifU protein (C-terminal fragment) [Phaeospirillum
molischianum DSM 120]
gi|380683393|emb|CCG41658.1| putative nifU protein (C-terminal fragment) [Phaeospirillum
molischianum DSM 120]
Length = 181
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%)
Query: 83 DLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
+L+ VRP + DGG+I DG+V + LQGAC CPS++ T+ GIE +LK
Sbjct: 114 ELIETRVRPAVAQDGGDITFRGFRDGIVYLHLQGACSGCPSASATLKHGIENMLK 168
>gi|195559882|ref|XP_002077376.1| GD12677 [Drosophila simulans]
gi|194202482|gb|EDX16058.1| GD12677 [Drosophila simulans]
Length = 175
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
+RP + DGG+I + E GVV +K+QG+C SCPSS T+ G++ +L + + ++ +
Sbjct: 82 IRPTVQEDGGDIVFMGYEAGVVKLKMQGSCSSCPSSIVTLKNGVQNML-QFYIPEVESVE 140
Query: 149 QVYDEEVR 156
QV+DE R
Sbjct: 141 QVFDEADR 148
>gi|89053356|ref|YP_508807.1| nitrogen-fixing NifU-like protein [Jannaschia sp. CCS1]
gi|88862905|gb|ABD53782.1| nitrogen-fixing NifU-like protein [Jannaschia sp. CCS1]
Length = 187
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKE 138
VRP + DGG+I + GVV + +QGAC CPSST T+ MGIE +L+
Sbjct: 125 VRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRH 174
>gi|410954973|ref|XP_003984133.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 2 [Felis catus]
Length = 113
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 89 VRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIR 148
+RP + DGG++ EDG+V +KLQG+C SCPSS T+ GI+ +L+ + ++ +
Sbjct: 40 IRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSMITLKNGIQNMLQ-FYIPEVEGVE 98
Query: 149 QVYDEEVRE 157
QV D+E E
Sbjct: 99 QVMDDESDE 107
>gi|349579522|dbj|GAA24684.1| K7_Nfu1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 256
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 10/90 (11%)
Query: 74 QFDLTAKNVD-------LVLEDVRPYLIADGGNIDVVSVE--DGVVSVKLQGACGSCPSS 124
+F+LT ++ + L+ +RP ++ DGG+ID + G V ++LQGAC SC SS
Sbjct: 143 KFELTEEDEEVSELIEELIDTRIRPAILEDGGDIDYRGWDPKTGTVYLRLQGACTSCSSS 202
Query: 125 TTTMSMGIERVLKEKFGDAIKDIRQVYDEE 154
T+ GIE +LK + D +K++ Q+ D E
Sbjct: 203 EVTLKYGIESMLKH-YVDEVKEVIQIMDPE 231
>gi|169350337|ref|ZP_02867275.1| hypothetical protein CLOSPI_01098 [Clostridium spiroforme DSM 1552]
gi|169293120|gb|EDS75253.1| NifU-like protein [Clostridium spiroforme DSM 1552]
Length = 83
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 41/62 (66%)
Query: 78 TAKNVDLVLEDVRPYLIADGGNIDVVSVEDGVVSVKLQGACGSCPSSTTTMSMGIERVLK 137
T + ++ V+ +RPYL DGG+I++V +DG+V VK+ GAC C T+ G+E++L
Sbjct: 6 TIEEIEKVINKLRPYLNRDGGDIELVDFKDGIVYVKMLGACAGCAMLDETLKDGVEQILM 65
Query: 138 EK 139
E+
Sbjct: 66 EE 67
>gi|260061614|ref|YP_003194694.1| hypothetical protein RB2501_08435 [Robiginitalea biformata
HTCC2501]
gi|88785746|gb|EAR16915.1| hypothetical protein RB2501_08435 [Robiginitalea biformata
HTCC2501]
Length = 79
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 76 DLTAKNVDLVLEDVRPYLIADGGNIDVVSVEDGV-VSVKLQGACGSCPSSTTTMSMGIER 134
+LT+K ++ LE++RP+L +DGG+I +V +EDG V V+L+GAC C + T+ G+E
Sbjct: 5 ELTSK-IEAALEEIRPFLQSDGGDISLVGIEDGTRVKVRLEGACVGCTVNQMTLKSGVEM 63
Query: 135 VLKE 138
+K+
Sbjct: 64 TIKK 67
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.129 0.359
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,625,262,163
Number of Sequences: 23463169
Number of extensions: 99135704
Number of successful extensions: 246045
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2013
Number of HSP's successfully gapped in prelim test: 752
Number of HSP's that attempted gapping in prelim test: 243152
Number of HSP's gapped (non-prelim): 2921
length of query: 183
length of database: 8,064,228,071
effective HSP length: 133
effective length of query: 50
effective length of database: 9,238,593,890
effective search space: 461929694500
effective search space used: 461929694500
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 72 (32.3 bits)