Query 030090
Match_columns 183
No_of_seqs 141 out of 1282
Neff 8.2
Searched_HMMs 13730
Date Mon Mar 25 13:19:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030090.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/030090hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1egwa_ d.88.1.1 (A:) Myocyte 100.0 3.3E-41 2.4E-45 217.4 2.5 71 2-72 1-71 (71)
2 d1srsa_ d.88.1.1 (A:) Serum re 100.0 5.3E-39 3.9E-43 212.1 1.5 71 1-71 2-72 (84)
3 d1mnma_ d.88.1.1 (A:) MCM1 tra 100.0 2.4E-38 1.8E-42 210.3 1.5 71 2-72 3-73 (85)
4 d1r8ea1 a.6.1.3 (A:3-120) Tran 57.6 15 0.0011 22.9 6.2 9 118-126 62-70 (118)
5 d1kafa_ d.199.1.1 (A:) DNA-bin 55.8 1.3 9.4E-05 28.0 0.3 52 5-71 22-74 (108)
6 d1uklc_ a.38.1.1 (C:) SREBP-2 53.0 11 0.00083 20.9 4.3 25 147-171 33-57 (61)
7 d1q08a_ a.6.1.3 (A:) Transcrip 48.5 24 0.0018 21.2 5.9 52 117-168 16-67 (94)
8 d1u3em2 d.285.1.1 (M:106-174) 47.2 5.6 0.00041 22.8 2.1 24 43-66 16-40 (69)
9 d1fxka_ a.2.5.1 (A:) Prefoldin 45.5 29 0.0021 21.3 8.3 34 140-173 72-105 (107)
10 d2oa5a1 d.362.1.1 (A:7-102) Un 42.1 34 0.0025 21.0 6.9 55 89-143 7-63 (96)
11 d1am9a_ a.38.1.1 (A:) SREBP-1a 40.6 26 0.0019 20.3 4.8 29 146-174 49-77 (80)
12 d2oa5a1 d.362.1.1 (A:7-102) Un 39.0 9.8 0.00072 23.6 2.5 24 149-172 4-27 (96)
13 d2fcia1 d.93.1.1 (A:1-105) Pho 37.8 7.8 0.00057 24.1 2.0 42 33-74 45-89 (105)
14 d1pvma3 g.41.13.1 (A:143-178) 37.8 9 0.00065 18.7 1.7 22 35-56 3-24 (36)
15 d2vgba3 c.49.1.1 (A:440-573) P 36.0 8.4 0.00061 25.1 2.0 26 27-53 15-40 (134)
16 d1mila_ d.93.1.1 (A:) Shc adap 32.5 16 0.0012 22.5 2.9 40 34-73 42-84 (104)
17 d1m2da_ c.47.1.11 (A:) Thiored 30.7 16 0.0012 22.4 2.6 25 47-71 64-89 (101)
18 d2h3ja1 b.34.1.2 (A:1-75) Hypo 30.5 20 0.0015 20.7 2.9 44 13-56 7-51 (75)
19 d1b43a1 a.60.7.1 (A:220-339) F 30.2 6.1 0.00044 25.5 0.4 33 33-71 7-39 (120)
20 d1t27a_ d.129.3.4 (A:) Phoshat 28.7 26 0.0019 25.7 3.9 25 115-139 235-259 (269)
21 d1v9ya_ d.110.3.2 (A:) Direct 28.3 16 0.0011 21.5 2.2 31 36-67 5-35 (113)
22 d1r8da_ a.6.1.3 (A:) Multidrug 27.8 45 0.0033 20.2 4.5 10 118-127 60-69 (109)
23 d1r1qa_ d.93.1.1 (A:) GRB2-rel 27.6 18 0.0013 21.8 2.4 40 33-73 42-86 (97)
24 d2shpa2 d.93.1.1 (A:2-110) Tyr 27.4 21 0.0016 22.0 2.8 42 33-74 40-85 (109)
25 d1nkpa_ a.38.1.1 (A:) Myc prot 27.0 57 0.0041 19.0 5.0 26 147-172 59-84 (88)
26 d2cs0a1 d.93.1.1 (A:8-113) Hem 26.7 26 0.0019 21.3 3.2 39 35-73 46-90 (106)
27 d1zavu1 a.108.1.1 (U:1-30) Rib 26.3 9.9 0.00072 17.9 0.7 18 116-133 11-28 (30)
28 d1bjta_ e.11.1.1 (A:) DNA topo 26.2 1.1E+02 0.0082 25.4 8.1 26 44-71 556-581 (760)
29 d2hq4a1 d.342.1.1 (A:1-152) Hy 26.1 16 0.0011 23.9 1.9 24 47-70 126-149 (152)
30 d2shpa3 d.93.1.1 (A:111-218) T 25.0 20 0.0015 21.7 2.3 28 46-73 61-91 (108)
31 d1yzma1 a.2.19.1 (A:456-501) F 24.5 48 0.0035 17.4 5.3 39 126-164 4-42 (46)
32 d1jyra_ d.93.1.1 (A:) Growth f 24.5 24 0.0017 21.3 2.5 41 32-73 39-84 (96)
33 d1nkpb_ a.38.1.1 (B:) Max prot 23.8 64 0.0046 18.5 5.8 27 146-172 53-79 (83)
34 d1a3xa3 c.49.1.1 (A:367-500) P 23.8 11 0.00079 24.5 0.8 25 28-53 16-40 (134)
35 d1rl2a2 b.40.4.5 (A:60-125) N- 22.8 5.6 0.00041 23.1 -0.8 39 17-57 3-45 (66)
36 d1iruc_ d.153.1.4 (C:) Proteas 22.6 6.1 0.00045 28.5 -0.8 15 42-56 5-19 (250)
37 d2veaa2 d.110.2.4 (A:327-514) 22.5 27 0.002 24.0 2.8 44 26-71 24-71 (188)
38 d1bjta_ e.11.1.1 (A:) DNA topo 21.9 27 0.0019 29.6 3.1 41 92-132 710-750 (760)
39 d2azeb1 e.63.1.2 (B:201-301) T 21.9 83 0.0061 19.2 5.6 29 144-172 5-33 (101)
40 d1zpsa1 b.168.1.1 (A:8-131) Ph 20.4 6.8 0.00049 25.6 -0.9 38 16-53 47-93 (124)
41 d1wika_ c.47.1.1 (A:) Thioredo 20.2 37 0.0027 20.9 2.9 28 43-70 15-44 (109)
42 d1nu9c1 a.8.6.1 (C:1-145) Stap 20.0 65 0.0047 21.0 4.1 26 113-138 108-133 (145)
No 1
>d1egwa_ d.88.1.1 (A:) Myocyte enhancer factor Mef2a core {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=3.3e-41 Score=217.41 Aligned_cols=71 Identities=48% Similarity=0.784 Sum_probs=69.4
Q ss_pred CccccceeeecCCcccccccccccchhhhhHHhhhhhcCcceEEEEecCCCcccccCcchhHHHHHHhhhc
Q 030090 2 AREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMH 72 (183)
Q Consensus 2 gR~Ki~ik~Ien~~~R~~Tf~KRr~GL~KKA~ELs~LCd~~vavivfs~~gk~~~~~s~~v~~vl~RY~~~ 72 (183)
||+||+|++|+|+..|+|||+|||+||||||+||||||||+||||||||+|++|+|+||++++|++||..+
T Consensus 1 GR~Ki~ik~Ie~~~~R~vTFsKRk~GL~KKa~ELs~LC~~~valiv~s~~gk~~~f~s~~~~~vl~ry~~~ 71 (71)
T d1egwa_ 1 GRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLLKYTEY 71 (71)
T ss_dssp CCSCCCSSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCCEEEEESSCHHHHHHHHHHC
T ss_pred CCccceEEeccCCchheeehhHhhhhHHHHHHHHhhccCCcEEEEEEcCCCCEEEeeCCCHHHHHHHHhcC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999753
No 2
>d1srsa_ d.88.1.1 (A:) Serum response factor (SRF) core {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=5.3e-39 Score=212.15 Aligned_cols=71 Identities=37% Similarity=0.497 Sum_probs=69.6
Q ss_pred CCccccceeeecCCcccccccccccchhhhhHHhhhhhcCcceEEEEecCCCcccccCcchhHHHHHHhhh
Q 030090 1 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNM 71 (183)
Q Consensus 1 mgR~Ki~ik~Ien~~~R~~Tf~KRr~GL~KKA~ELs~LCd~~vavivfs~~gk~~~~~s~~v~~vl~RY~~ 71 (183)
+||+||+|++|+|+..|+|||+|||.||||||+||||||||+||||||||+|++|+|+||++++|+++|..
T Consensus 2 ~GR~Ki~i~~Ie~~~~R~vTFsKRr~GL~KKa~ELs~Lc~~~v~liv~s~~gk~~~f~s~~~~~vi~~~~~ 72 (84)
T d1srsa_ 2 RGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQPMITSETG 72 (84)
T ss_dssp CCCCCCCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECTTCCEEEEECGGGHHHHSSHHH
T ss_pred CCCceeeEEeecCcchhhhhhHHhhhhHHHHHHHHhcccCCcEEEEEEcCCCCEEEeeCCCHHHHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999975
No 3
>d1mnma_ d.88.1.1 (A:) MCM1 transcriptional regulator {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=2.4e-38 Score=210.34 Aligned_cols=71 Identities=41% Similarity=0.593 Sum_probs=69.5
Q ss_pred CccccceeeecCCcccccccccccchhhhhHHhhhhhcCcceEEEEecCCCcccccCcchhHHHHHHhhhc
Q 030090 2 AREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMH 72 (183)
Q Consensus 2 gR~Ki~ik~Ien~~~R~~Tf~KRr~GL~KKA~ELs~LCd~~vavivfs~~gk~~~~~s~~v~~vl~RY~~~ 72 (183)
||+||+|++|+|+.+|+|||+|||.||||||+||||||||+||||||||+|++|+|+||+|+.|++||...
T Consensus 3 ~R~Ki~i~~I~~~~~R~vTFsKRr~GL~KKa~ELsvLc~a~vaviv~s~~gk~~~f~sp~v~~vl~r~~~~ 73 (85)
T d1mnma_ 3 ERRKIEIKFIENKTRRHVTFSKRKHGIMKKAFELSVLTGTQVLLLVVSETGLVYTFSTPKFEPIVTQQEGR 73 (85)
T ss_dssp CCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCEEEEECTTTTHHHHSHHHH
T ss_pred CccceEEEEecCCchhhhhhHHHHhhHHHHHHHHhccCCCcEEEEEEcCCCCEEeccCCCHHHHHHHHhcc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999864
No 4
>d1r8ea1 a.6.1.3 (A:3-120) Transcription activator BmrR {Bacillus subtilis [TaxId: 1423]}
Probab=57.56 E-value=15 Score=22.90 Aligned_cols=9 Identities=22% Similarity=0.464 Sum_probs=4.7
Q ss_pred CCHHHHHHH
Q 030090 118 LTIEELQHL 126 (183)
Q Consensus 118 Ls~~eL~~L 126 (183)
+|++++..+
T Consensus 62 ~sl~eIk~~ 70 (118)
T d1r8ea1 62 TPLEEMKKA 70 (118)
T ss_dssp CCHHHHHHH
T ss_pred CCHHHHHHH
Confidence 555555443
No 5
>d1kafa_ d.199.1.1 (A:) DNA-binding C-terminal domain of the transcription factor MotA {Bacteriophage T4 [TaxId: 10665]}
Probab=55.85 E-value=1.3 Score=28.01 Aligned_cols=52 Identities=13% Similarity=0.187 Sum_probs=33.9
Q ss_pred ccceeee-cCCcccccccccccchhhhhHHhhhhhcCcceEEEEecCCCcccccCcchhHHHHHHhhh
Q 030090 5 KIKIRKI-DNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNM 71 (183)
Q Consensus 5 Ki~ik~I-en~~~R~~Tf~KRr~GL~KKA~ELs~LCd~~vavivfs~~gk~~~~~s~~v~~vl~RY~~ 71 (183)
+|++|.| +|.++-.++|+||-+|+-+ +=.-.+|..--|+..-+++.+..|..
T Consensus 22 ~i~lk~v~inRsNyev~f~krT~GiR~---------------fEi~n~G~~RIfgYkm~e~~~q~Ft~ 74 (108)
T d1kafa_ 22 GFVLKKVEIYRSNYLAILEKRTNGIRN---------------FEINNNGNMRIFGYKMMEHHIQKFTD 74 (108)
T ss_dssp TCCEEEEEEETTEEEEEEEEEETTEEE---------------EEECTTSEEEEEEESCCHHHHHHHHT
T ss_pred ceeEeeeeeccccceeehhhhcCceeE---------------EEEecCCcEEEEeeeccHHHHHHHhh
Confidence 5788888 5788899999999998754 11223455444555444555555554
No 6
>d1uklc_ a.38.1.1 (C:) SREBP-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=53.01 E-value=11 Score=20.95 Aligned_cols=25 Identities=32% Similarity=0.292 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 030090 147 NEISTLERKGAKLLEENKNLKQKVR 171 (183)
Q Consensus 147 ~~i~~l~~k~~~l~~~n~~L~~~~~ 171 (183)
+.|..|+.....|.+++..|+....
T Consensus 33 ~YI~~Lq~~~~~L~~e~~~L~~~~~ 57 (61)
T d1uklc_ 33 DYIKYLQQVNHKLRQENMVLKLANQ 57 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5567788888888888888877653
No 7
>d1q08a_ a.6.1.3 (A:) Transcriptional regulator ZntR {Escherichia coli [TaxId: 562]}
Probab=48.54 E-value=24 Score=21.22 Aligned_cols=52 Identities=15% Similarity=0.266 Sum_probs=26.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 030090 117 GLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENKNLKQ 168 (183)
Q Consensus 117 ~Ls~~eL~~Le~~Le~~L~~IR~rK~~ll~~~i~~l~~k~~~l~~~n~~L~~ 168 (183)
|+|++|+.+|-..-...-..--..-..++.+++..+..+...|+.--..|+.
T Consensus 16 GFsL~EI~~ll~l~~~~~~~~c~~v~~l~~~kl~~i~~kI~~L~~l~~~L~~ 67 (94)
T d1q08a_ 16 GFSLESIRELLSIRIDPEHHTCQESKGIVQERLQEVEARIAELQSMQRSLQR 67 (94)
T ss_dssp TCCHHHHHHHHHHHHCGGGCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4788888887765432111001111234556666666666666554444443
No 8
>d1u3em2 d.285.1.1 (M:106-174) Intron-encoded homing endonuclease I-HmuI {Bacteriophage SP01 [TaxId: 10685]}
Probab=47.22 E-value=5.6 Score=22.84 Aligned_cols=24 Identities=21% Similarity=0.177 Sum_probs=18.5
Q ss_pred eEEEEecCCCcccccCc-chhHHHH
Q 030090 43 VGVIIFSATGKLFESSS-SSMKDII 66 (183)
Q Consensus 43 vavivfs~~gk~~~~~s-~~v~~vl 66 (183)
--++|.||+|--|.|+| ..+-+.+
T Consensus 16 kpIyvis~sGh~y~f~s~~kAaelL 40 (69)
T d1u3em2 16 KPIIVISPDGIEKEYPSTKCACEEL 40 (69)
T ss_dssp CCEEEECTTSCEEEESCHHHHHHHH
T ss_pred CCEEEEcCCCceEEcchHHHHHHHh
Confidence 34788999999999999 5555544
No 9
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=45.48 E-value=29 Score=21.28 Aligned_cols=34 Identities=12% Similarity=0.240 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 030090 140 TKGDRIMNEISTLERKGAKLLEENKNLKQKVRLF 173 (183)
Q Consensus 140 rK~~ll~~~i~~l~~k~~~l~~~n~~L~~~~~~~ 173 (183)
.+...+..++..|.+....+.++-..++.++.++
T Consensus 72 ~~~e~l~~~i~~l~~q~~~l~~~l~~~~~~l~~~ 105 (107)
T d1fxka_ 72 EKLETLQLREKTIERQEERVMKKLQEMQVNIQEA 105 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344567778888888888998888888888764
No 10
>d2oa5a1 d.362.1.1 (A:7-102) Uncharacterized protein BQLF2 {Murid herpesvirus 4 [TaxId: 33708]}
Probab=42.10 E-value=34 Score=21.01 Aligned_cols=55 Identities=15% Similarity=0.035 Sum_probs=38.0
Q ss_pred hHHHHHHhHHHHHHHHHHHHhh--cCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 030090 89 ENSKYLSLSREIADKSRQLRQM--RGEDLHGLTIEELQHLETMLEQGLSRVLQTKGD 143 (183)
Q Consensus 89 ~~~~~~~Lk~eie~l~~~lr~~--~ge~l~~Ls~~eL~~Le~~Le~~L~~IR~rK~~ 143 (183)
+..++.+|+-++..|.+.+++- .+.+=.-|+..+=+.+-.+...+|...-.+|.+
T Consensus 7 LaaeL~rL~~ENk~LKkkl~~~~~~~~~d~~LT~~qke~~I~s~~~~lts~A~kKIe 63 (96)
T d2oa5a1 7 MVKEVERLKLENKTLKQKVKSSGAVSSDDSILTAAKRESIIVSSSRALGAVAMRKIE 63 (96)
T ss_dssp HHHHHHHHHHHHHHHHHTC---------CCBCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567888988888888888773 233446699999888888888888877666643
No 11
>d1am9a_ a.38.1.1 (A:) SREBP-1a {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.58 E-value=26 Score=20.34 Aligned_cols=29 Identities=28% Similarity=0.336 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 030090 146 MNEISTLERKGAKLLEENKNLKQKVRLFD 174 (183)
Q Consensus 146 ~~~i~~l~~k~~~l~~~n~~L~~~~~~~~ 174 (183)
.+.|..|+.....|.++|..|+..+....
T Consensus 49 ~~yI~~L~~~~~~L~~e~~~lk~~~~~~~ 77 (80)
T d1am9a_ 49 IDYIRFLQHSNQKLKQENLSLRTAVHKSK 77 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 34456677777778888888877776543
No 12
>d2oa5a1 d.362.1.1 (A:7-102) Uncharacterized protein BQLF2 {Murid herpesvirus 4 [TaxId: 33708]}
Probab=39.01 E-value=9.8 Score=23.63 Aligned_cols=24 Identities=38% Similarity=0.430 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 030090 149 ISTLERKGAKLLEENKNLKQKVRL 172 (183)
Q Consensus 149 i~~l~~k~~~l~~~n~~L~~~~~~ 172 (183)
++.|......|+-||+.|++++..
T Consensus 4 ~EeLaaeL~rL~~ENk~LKkkl~~ 27 (96)
T d2oa5a1 4 YEEMVKEVERLKLENKTLKQKVKS 27 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 467888888999999999999864
No 13
>d2fcia1 d.93.1.1 (A:1-105) Phospholipase C-gamma-1 {Cow (Bos taurus) [TaxId: 9913]}
Probab=37.84 E-value=7.8 Score=24.15 Aligned_cols=42 Identities=17% Similarity=0.255 Sum_probs=27.8
Q ss_pred HhhhhhcCcceEEEEecCCCcccccCc---chhHHHHHHhhhccc
Q 030090 33 EELSVLCDAEVGVIIFSATGKLFESSS---SSMKDIIARYNMHSS 74 (183)
Q Consensus 33 ~ELs~LCd~~vavivfs~~gk~~~~~s---~~v~~vl~RY~~~~~ 74 (183)
+=||+.++-.|-=+..-.+|..|.... +++.++|+-|...+.
T Consensus 45 yvLSv~~~~~v~H~~I~~~~~~~~~~~~~F~sl~~LV~~y~~~~~ 89 (105)
T d2fcia1 45 YAISFRAEGKIKHCRVQQEGQTVMLGNSEFDSLVDLISYYEKHPL 89 (105)
T ss_dssp EEEEEEETTEECCCEEBCCSSCEECSSSEESTTHHHHHHHHHSCC
T ss_pred EEEEEEeccccEEEEEEecCCeEecCCcccCCHHHHHHHHhhCCC
Confidence 346777766554444445666665554 699999999987653
No 14
>d1pvma3 g.41.13.1 (A:143-178) Hypothetical protein Ta0289 C-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=37.76 E-value=9 Score=18.67 Aligned_cols=22 Identities=18% Similarity=0.308 Sum_probs=18.1
Q ss_pred hhhhcCcceEEEEecCCCcccc
Q 030090 35 LSVLCDAEVGVIIFSATGKLFE 56 (183)
Q Consensus 35 Ls~LCd~~vavivfs~~gk~~~ 56 (183)
|+--||+-|-+-||...|..-.
T Consensus 3 lcpkcgvgvl~pvy~~kgeikv 24 (36)
T d1pvma3 3 LCPKCGVGVLEPVYNEKGEIKV 24 (36)
T ss_dssp BCTTTSSSBEEEEECTTSCEEE
T ss_pred cCCccCceEEEEeecCCCcEEE
Confidence 6677999999999999995433
No 15
>d2vgba3 c.49.1.1 (A:440-573) Pyruvate kinase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.05 E-value=8.4 Score=25.08 Aligned_cols=26 Identities=27% Similarity=0.376 Sum_probs=20.9
Q ss_pred hhhhhHHhhhhhcCcceEEEEecCCCc
Q 030090 27 GLFKKAEELSVLCDAEVGVIIFSATGK 53 (183)
Q Consensus 27 GL~KKA~ELs~LCd~~vavivfs~~gk 53 (183)
.+-.=|-+++.-++|. |+|+|+.+|.
T Consensus 15 aia~sav~~A~~l~a~-aIvv~T~sG~ 40 (134)
T d2vgba3 15 VTAIGAVEAAFKCCAA-AIIVLTTTGR 40 (134)
T ss_dssp HHHHHHHHHHHHHTCS-EEEEECSSSH
T ss_pred HHHHHHHHHHHhCCCC-EEEEEcCCcH
Confidence 4455578899999998 5999999996
No 16
>d1mila_ d.93.1.1 (A:) Shc adaptor protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.47 E-value=16 Score=22.46 Aligned_cols=40 Identities=10% Similarity=0.109 Sum_probs=25.6
Q ss_pred hhhhhcCcceEEEEecCCCcccccCc---chhHHHHHHhhhcc
Q 030090 34 ELSVLCDAEVGVIIFSATGKLFESSS---SSMKDIIARYNMHS 73 (183)
Q Consensus 34 ELs~LCd~~vavivfs~~gk~~~~~s---~~v~~vl~RY~~~~ 73 (183)
=||+.++-.|.-+.....+..|.+.. +++.++|+-|...+
T Consensus 42 vLSv~~~~~v~H~~I~~~~~~~~~~~~~F~sl~~LV~~y~~~~ 84 (104)
T d1mila_ 42 VLTGLQSGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNH 84 (104)
T ss_dssp EEEEEETTEEEEEEEBCTTSSEECSSCEESSHHHHHHHHHHHT
T ss_pred EEEEEEccccceEEEEeCCCEEEeCCeeECCHHHHHHHHhhCC
Confidence 47788877776444343333333222 69999999998754
No 17
>d1m2da_ c.47.1.11 (A:) Thioredoxin-like 2Fe-2S ferredoxin {Aquifex aeolicus [TaxId: 63363]}
Probab=30.70 E-value=16 Score=22.38 Aligned_cols=25 Identities=8% Similarity=0.243 Sum_probs=19.6
Q ss_pred EecCCCcccccCc-chhHHHHHHhhh
Q 030090 47 IFSATGKLFESSS-SSMKDIIARYNM 71 (183)
Q Consensus 47 vfs~~gk~~~~~s-~~v~~vl~RY~~ 71 (183)
++-|+|..|...+ ..+.+||+.+..
T Consensus 64 ~i~P~~~~Y~~v~~e~v~~Iv~~hl~ 89 (101)
T d1m2da_ 64 VVYPDGVWYGQVKPEDVDEIVEKHLK 89 (101)
T ss_dssp EEETTTEEECSCCGGGHHHHHHHTTT
T ss_pred EEcCCccEEecCCHHHHHHHHHHHHH
Confidence 4457788888888 599999998754
No 18
>d2h3ja1 b.34.1.2 (A:1-75) Hypothetical protein PA4359 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=30.52 E-value=20 Score=20.70 Aligned_cols=44 Identities=16% Similarity=0.231 Sum_probs=35.2
Q ss_pred CCcccccccccc-cchhhhhHHhhhhhcCcceEEEEecCCCcccc
Q 030090 13 NITARQVTFSKR-RRGLFKKAEELSVLCDAEVGVIIFSATGKLFE 56 (183)
Q Consensus 13 n~~~R~~Tf~KR-r~GL~KKA~ELs~LCd~~vavivfs~~gk~~~ 56 (183)
+.+.|=+.|+.- .+.+-.+-.++-+..|++|.|+=.+|.|.|..
T Consensus 7 g~~~~I~g~~~~~~~~~~~rL~~mG~~~G~~v~v~~~~p~g~p~~ 51 (75)
T d2h3ja1 7 SRSYRITGYSPAISNGYRQRLFSMGLLPGAALRVVRIAPLGDPIQ 51 (75)
T ss_dssp CCEEEEEEECTTCCTTHHHHHHHHTCCTTCEEEEEECCTTSCCCE
T ss_pred CCEEEEEEECCcCCHHHHHHHHHcCCCCCCEEEEEEECCCCCCEE
Confidence 445566777754 45688999999999999999999999887654
No 19
>d1b43a1 a.60.7.1 (A:220-339) Flap endonuclease-1 (Fen-1 nuclease) {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=30.16 E-value=6.1 Score=25.50 Aligned_cols=33 Identities=15% Similarity=0.182 Sum_probs=17.9
Q ss_pred HhhhhhcCcceEEEEecCCCcccccCcchhHHHHHHhhh
Q 030090 33 EELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNM 71 (183)
Q Consensus 33 ~ELs~LCd~~vavivfs~~gk~~~~~s~~v~~vl~RY~~ 71 (183)
-+||+|||+|=+. +| +.--+.-.+-++|..|.+
T Consensus 7 Idl~iL~G~DY~~-----~g-I~GIGpktAlklikk~~~ 39 (120)
T d1b43a1 7 IELAILVGTDYNP-----GG-IKGIGLKKALEIVRHSKD 39 (120)
T ss_dssp HHHHHHHCCTTST-----TC-STTCCHHHHHHHHHTCSS
T ss_pred HHHHHHhCCCCCc-----cc-CCCcCHHHHHHHHHHhCC
Confidence 4799999988432 11 111222244456776654
No 20
>d1t27a_ d.129.3.4 (A:) Phoshatidylinositol transfer protein, PITP {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=28.68 E-value=26 Score=25.71 Aligned_cols=25 Identities=20% Similarity=0.380 Sum_probs=21.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHH
Q 030090 115 LHGLTIEELQHLETMLEQGLSRVLQ 139 (183)
Q Consensus 115 l~~Ls~~eL~~Le~~Le~~L~~IR~ 139 (183)
=-+||++|+..+|......|.++|.
T Consensus 235 W~gmTmedIR~~E~e~q~~L~~~~~ 259 (269)
T d1t27a_ 235 WVDLTMDDIRRMEEETKRQLDEMRQ 259 (269)
T ss_dssp HTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHh
Confidence 4569999999999999999998874
No 21
>d1v9ya_ d.110.3.2 (A:) Direct oxygen sensor protein, DOS {Escherichia coli [TaxId: 562]}
Probab=28.32 E-value=16 Score=21.47 Aligned_cols=31 Identities=6% Similarity=0.168 Sum_probs=22.6
Q ss_pred hhhcCcceEEEEecCCCcccccCcchhHHHHH
Q 030090 36 SVLCDAEVGVIIFSATGKLFESSSSSMKDIIA 67 (183)
Q Consensus 36 s~LCd~~vavivfs~~gk~~~~~s~~v~~vl~ 67 (183)
+++=.+..|++++.+.|+ ..|+++.+.+++-
T Consensus 5 ~~~e~~~d~i~~~d~~g~-i~~~N~~~~~l~G 35 (113)
T d1v9ya_ 5 PALEQNMMGAVLINENDE-VMFFNPAAEKLWG 35 (113)
T ss_dssp HHHHTCSSEEEEECTTSB-EEEECHHHHHHHS
T ss_pred HHHHcCcCcEEEEeCCCC-EEEEchhHhhhhc
Confidence 344455668999999888 4477888888874
No 22
>d1r8da_ a.6.1.3 (A:) Multidrug transporter activator MtaN {Bacillus subtilis [TaxId: 1423]}
Probab=27.80 E-value=45 Score=20.17 Aligned_cols=10 Identities=10% Similarity=0.521 Sum_probs=6.9
Q ss_pred CCHHHHHHHH
Q 030090 118 LTIEELQHLE 127 (183)
Q Consensus 118 Ls~~eL~~Le 127 (183)
+|++++..+-
T Consensus 60 ~sl~eI~~~l 69 (109)
T d1r8da_ 60 FRLDEIKEML 69 (109)
T ss_dssp CCHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 6777777654
No 23
>d1r1qa_ d.93.1.1 (A:) GRB2-related adaptor protein 2 (MONA, GRID) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=27.63 E-value=18 Score=21.82 Aligned_cols=40 Identities=20% Similarity=0.285 Sum_probs=24.2
Q ss_pred HhhhhhcCcceEEEE--ecCCCcccccCc---chhHHHHHHhhhcc
Q 030090 33 EELSVLCDAEVGVII--FSATGKLFESSS---SSMKDIIARYNMHS 73 (183)
Q Consensus 33 ~ELs~LCd~~vaviv--fs~~gk~~~~~s---~~v~~vl~RY~~~~ 73 (183)
.=||+-++-.|-=+. ..++|..+ ..+ +++.++|+.|..++
T Consensus 42 ~~LSv~~~~~v~H~~I~~~~~g~~~-~~~~~F~sl~~LV~~y~~~~ 86 (97)
T d1r1qa_ 42 FSISVRHEDDVQHFKVMRDTKGNYF-LWTEKFPSLNKLVDYYRTTS 86 (97)
T ss_dssp EEEEEECSSSEEEEECEECTTCCEE-SSSCCBSSHHHHHHHTTTSC
T ss_pred EEEEEEecCCeEEEEEEEcCCCeEE-eCCCCcCCHHHHHHHHccCC
Confidence 346666655554443 33444332 333 69999999998765
No 24
>d2shpa2 d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.44 E-value=21 Score=21.96 Aligned_cols=42 Identities=21% Similarity=0.365 Sum_probs=26.0
Q ss_pred HhhhhhcCcceEEEEecCCCcccc-cCc---chhHHHHHHhhhccc
Q 030090 33 EELSVLCDAEVGVIIFSATGKLFE-SSS---SSMKDIIARYNMHSS 74 (183)
Q Consensus 33 ~ELs~LCd~~vavivfs~~gk~~~-~~s---~~v~~vl~RY~~~~~ 74 (183)
+=||+.++-.|-=+.+...+..|. .+. +++.++|+-|...+.
T Consensus 40 y~LSv~~~~~v~H~~I~~~~~~~~~~~~~~F~sl~~LV~~y~~~~~ 85 (109)
T d2shpa2 40 LTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAELVQYYMEHHG 85 (109)
T ss_dssp EEEEEEETTEEEEEEEECSSSCEEETTSCEESSHHHHHHHHHTCTT
T ss_pred EEEEEEeCCcEEEEEEEEcCCeEEEcCCcccCCHHHHHHHHHHCCC
Confidence 346666666665544444444333 333 699999999987653
No 25
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.00 E-value=57 Score=19.03 Aligned_cols=26 Identities=23% Similarity=0.230 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 030090 147 NEISTLERKGAKLLEENKNLKQKVRL 172 (183)
Q Consensus 147 ~~i~~l~~k~~~l~~~n~~L~~~~~~ 172 (183)
.++..+......|..+|..|..++..
T Consensus 59 ~~~~~l~~~~~~l~~~~~~L~~~l~~ 84 (88)
T d1nkpa_ 59 AEEQKLISEEDLLRKRREQLKHKLEQ 84 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555555566666666666644
No 26
>d2cs0a1 d.93.1.1 (A:8-113) Hematopoietic SH2 domain containing protein HSH2D {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.67 E-value=26 Score=21.29 Aligned_cols=39 Identities=10% Similarity=0.171 Sum_probs=23.0
Q ss_pred hhhhcCcce--EEEEecCCCcccccCc----chhHHHHHHhhhcc
Q 030090 35 LSVLCDAEV--GVIIFSATGKLFESSS----SSMKDIIARYNMHS 73 (183)
Q Consensus 35 Ls~LCd~~v--avivfs~~gk~~~~~s----~~v~~vl~RY~~~~ 73 (183)
||+.++-.+ ..|...++|.-+..++ +++.++|+.|...+
T Consensus 46 Lsv~~~~~~~h~~I~~~~~g~~~~~~~~~~F~sl~eLV~~y~~~~ 90 (106)
T d2cs0a1 46 LSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALVTFHQQKP 90 (106)
T ss_dssp EEECCSSSCEEEEEEECTTSCEECTTCSCCBSSHHHHHHHHTTSC
T ss_pred EEEEecCCceeEEEEEcCCCCEEEecCCccCCCHHHHHHHHHHCC
Confidence 444444333 3343455565443332 69999999998754
No 27
>d1zavu1 a.108.1.1 (U:1-30) Ribosomal protein L7/12, oligomerisation (N-terminal) domain {Thermotoga maritima [TaxId: 2336]}
Probab=26.29 E-value=9.9 Score=17.90 Aligned_cols=18 Identities=39% Similarity=0.466 Sum_probs=13.2
Q ss_pred CCCCHHHHHHHHHHHHHH
Q 030090 116 HGLTIEELQHLETMLEQG 133 (183)
Q Consensus 116 ~~Ls~~eL~~Le~~Le~~ 133 (183)
+.|++.||-+|-+.|++.
T Consensus 11 ekltvaelaelvk~ledk 28 (30)
T d1zavu1 11 EKLTVSELAELVKKLEDK 28 (30)
T ss_dssp HHSBHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHhh
Confidence 347788888888877764
No 28
>d1bjta_ e.11.1.1 (A:) DNA topoisomerase II, C-terminal fragment (residues 410-1202) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=26.18 E-value=1.1e+02 Score=25.45 Aligned_cols=26 Identities=19% Similarity=0.519 Sum_probs=19.7
Q ss_pred EEEEecCCCcccccCcchhHHHHHHhhh
Q 030090 44 GVIIFSATGKLFESSSSSMKDIIARYNM 71 (183)
Q Consensus 44 avivfs~~gk~~~~~s~~v~~vl~RY~~ 71 (183)
.+++|.+.|++..|.+ +.+||..|-.
T Consensus 556 Nm~l~d~~g~i~k~~s--l~eIL~~f~~ 581 (760)
T d1bjta_ 556 NMVAFDPHGKIKKYNS--VNEILSEFYY 581 (760)
T ss_dssp TEEEECTTSCEEEESS--HHHHHHHHHH
T ss_pred ceeEEcCCCcccchhh--HHHHHHHHHH
Confidence 4678999998887744 7888887754
No 29
>d2hq4a1 d.342.1.1 (A:1-152) Hypothetical protein PH1570 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=26.11 E-value=16 Score=23.87 Aligned_cols=24 Identities=29% Similarity=0.524 Sum_probs=21.2
Q ss_pred EecCCCcccccCcchhHHHHHHhh
Q 030090 47 IFSATGKLFESSSSSMKDIIARYN 70 (183)
Q Consensus 47 vfs~~gk~~~~~s~~v~~vl~RY~ 70 (183)
+..+.|.+|.|..||+.++|-+|.
T Consensus 126 iLD~rg~LfiFnKPs~~e~iLKYi 149 (152)
T d2hq4a1 126 ILDPRGRLFIFNKPSIANKILKYI 149 (152)
T ss_dssp EECTTSEEEEESSTTHHHHHHTTT
T ss_pred eECCCceEEEEcCccHHHHHHHHh
Confidence 456789999999999999999986
No 30
>d2shpa3 d.93.1.1 (A:111-218) Tyrosine phoshatase shp-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.00 E-value=20 Score=21.74 Aligned_cols=28 Identities=18% Similarity=0.267 Sum_probs=17.9
Q ss_pred EEecCCCcccccCc---chhHHHHHHhhhcc
Q 030090 46 IIFSATGKLFESSS---SSMKDIIARYNMHS 73 (183)
Q Consensus 46 ivfs~~gk~~~~~s---~~v~~vl~RY~~~~ 73 (183)
.|..++|+-+..+. +++.++|+-|..++
T Consensus 61 ~i~~~~~~~~~~~~~~F~sl~~LV~~y~~~~ 91 (108)
T d2shpa3 61 MIRCQELKYDVGGGERFDSLTDLVEHYKKNP 91 (108)
T ss_dssp EEEEETTEEESSSSCCBSSHHHHHHHHHHSC
T ss_pred EEEeCCCceEeCCCcccCCHHHHHHHHhhCC
Confidence 34444454433332 68999999998765
No 31
>d1yzma1 a.2.19.1 (A:456-501) FYVE finger-containing Rab5 effector protein rabenosyn-5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.50 E-value=48 Score=17.37 Aligned_cols=39 Identities=26% Similarity=0.243 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 030090 126 LETMLEQGLSRVLQTKGDRIMNEISTLERKGAKLLEENK 164 (183)
Q Consensus 126 Le~~Le~~L~~IR~rK~~ll~~~i~~l~~k~~~l~~~n~ 164 (183)
|.++++..-.=|+..|.---.++++.|.+..+.|+++..
T Consensus 4 llqQi~~ik~yI~QAk~a~R~dEV~~Le~NLreLq~e~~ 42 (46)
T d1yzma1 4 LLQQIHNITSFIRQAKAAGRMDEVRTLQENLRQLQDEYD 42 (46)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 344555555555666666668888888877777777654
No 32
>d1jyra_ d.93.1.1 (A:) Growth factor receptor-bound protein 2 (GRB2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.45 E-value=24 Score=21.29 Aligned_cols=41 Identities=20% Similarity=0.195 Sum_probs=25.7
Q ss_pred HHhhhhhcCcceEEEE-ec-CCCcccccCc---chhHHHHHHhhhcc
Q 030090 32 AEELSVLCDAEVGVII-FS-ATGKLFESSS---SSMKDIIARYNMHS 73 (183)
Q Consensus 32 A~ELs~LCd~~vaviv-fs-~~gk~~~~~s---~~v~~vl~RY~~~~ 73 (183)
+.=||+.++-.|.-.. .. ++|. |.... +++.++|+-|...+
T Consensus 39 ~~~LSv~~~~~v~H~~I~~~~~g~-~~~~~~~F~sl~~LV~~y~~~~ 84 (96)
T d1jyra_ 39 DFSLSVKFGNDVQHFKVLRDGAGK-YFLWVVKFNSLNELVDYHRSTS 84 (96)
T ss_dssp CEEEEEEETTEEEEEECEECTTSC-EESSSCEESSHHHHHHHTTSSC
T ss_pred CEEEEEEeCCceEEEEEEECCCCe-EEeCCccCCCHHHHHHHHhhCC
Confidence 3557777776654443 22 3343 33333 69999999998765
No 33
>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.84 E-value=64 Score=18.54 Aligned_cols=27 Identities=26% Similarity=0.218 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 030090 146 MNEISTLERKGAKLLEENKNLKQKVRL 172 (183)
Q Consensus 146 ~~~i~~l~~k~~~l~~~n~~L~~~~~~ 172 (183)
.++...|......|.++|..|..++..
T Consensus 53 ~~~~~~l~~~~~~l~~~~~~L~~~l~~ 79 (83)
T d1nkpb_ 53 RRKNHTHQQDIDDLKRQNALLEQQVRA 79 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444455555555666666666666643
No 34
>d1a3xa3 c.49.1.1 (A:367-500) Pyruvate kinase, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=23.81 E-value=11 Score=24.48 Aligned_cols=25 Identities=20% Similarity=0.271 Sum_probs=20.1
Q ss_pred hhhhHHhhhhhcCcceEEEEecCCCc
Q 030090 28 LFKKAEELSVLCDAEVGVIIFSATGK 53 (183)
Q Consensus 28 L~KKA~ELs~LCd~~vavivfs~~gk 53 (183)
+-.=|-+++.-++|+ |+|+|+.+|.
T Consensus 16 ia~sAv~~a~~l~a~-aIvv~T~sG~ 40 (134)
T d1a3xa3 16 VAASAVAAVFEQKAK-AIIVLSTSGT 40 (134)
T ss_dssp HHHHHHHHHHHHTCS-CCCEECSSSH
T ss_pred HHHHHHHHHHHcCCC-EEEEEcCCcH
Confidence 445578889999997 5899999996
No 35
>d1rl2a2 b.40.4.5 (A:60-125) N-terminal domain of ribosomal protein L2 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=22.82 E-value=5.6 Score=23.05 Aligned_cols=39 Identities=15% Similarity=0.353 Sum_probs=23.1
Q ss_pred cccccccccchhhhhHHhhhhhc----CcceEEEEecCCCccccc
Q 030090 17 RQVTFSKRRRGLFKKAEELSVLC----DAEVGVIIFSATGKLFES 57 (183)
Q Consensus 17 R~~Tf~KRr~GL~KKA~ELs~LC----d~~vavivfs~~gk~~~~ 57 (183)
|.+.|.+++.++.-++ .++.. .|-+|+|.|..+.+-|--
T Consensus 3 R~IDF~R~k~~i~g~V--~~IEYDPnRsa~IAlv~y~dG~k~YIL 45 (66)
T d1rl2a2 3 RIIDFKRDKDGIPGRV--ATIEYDPNRSANIALINYADGEKRYII 45 (66)
T ss_dssp SCBCSSCCCTTCCEEE--EEEEEEGGGTEEEEEEEETTSCEEEEE
T ss_pred cEEeeeecCCCCCEEE--EEEEeCCCCCeEEEEEEcCCCcEEEEE
Confidence 6778887776655333 22222 467888888765555543
No 36
>d1iruc_ d.153.1.4 (C:) Proteasome alpha subunit (non-catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=22.62 E-value=6.1 Score=28.53 Aligned_cols=15 Identities=33% Similarity=0.747 Sum_probs=11.3
Q ss_pred ceEEEEecCCCcccc
Q 030090 42 EVGVIIFSATGKLFE 56 (183)
Q Consensus 42 ~vavivfs~~gk~~~ 56 (183)
|-++-+|||+|++|.
T Consensus 5 d~~~t~fsp~Grl~Q 19 (250)
T d1iruc_ 5 DSRTTIFSPEGRLYQ 19 (250)
T ss_dssp CCCTTCCCTTSCCHH
T ss_pred CCCCeeECCCCcchH
Confidence 455678999998764
No 37
>d2veaa2 d.110.2.4 (A:327-514) Phytochrome-like protein Cph1 {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=22.49 E-value=27 Score=24.00 Aligned_cols=44 Identities=18% Similarity=0.265 Sum_probs=32.0
Q ss_pred chhhhhHHhhhhhcCcceEEEEecCCCcccccCc-c---hhHHHHHHhhh
Q 030090 26 RGLFKKAEELSVLCDAEVGVIIFSATGKLFESSS-S---SMKDIIARYNM 71 (183)
Q Consensus 26 ~GL~KKA~ELs~LCd~~vavivfs~~gk~~~~~s-~---~v~~vl~RY~~ 71 (183)
.||..-..+|.-|++|+-++|++. |..++++. | .+..+++-...
T Consensus 24 ~~l~~~~~~ll~l~~A~G~al~~~--~~~~~~G~~P~~~~i~~L~~wl~~ 71 (188)
T d2veaa2 24 EGLTNHPDRLLGLTGSQGAAICFG--EKLILVGETPDEKAVQYLLQWLEN 71 (188)
T ss_dssp HHHHTCHHHHHHTTTCSEEEEEET--TEEEEEESCCCHHHHHHHHHHHHH
T ss_pred HHHHhCCHHHHhhcCCCEEEEEEC--CEEEEeCCCcCHHHHHHHHHHHHh
Confidence 477888899999999999988886 66777776 4 45555544333
No 38
>d1bjta_ e.11.1.1 (A:) DNA topoisomerase II, C-terminal fragment (residues 410-1202) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=21.87 E-value=27 Score=29.56 Aligned_cols=41 Identities=15% Similarity=0.259 Sum_probs=23.7
Q ss_pred HHHHhHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHH
Q 030090 92 KYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQ 132 (183)
Q Consensus 92 ~~~~Lk~eie~l~~~lr~~~ge~l~~Ls~~eL~~Le~~Le~ 132 (183)
++.+|.++++.++.++..+......+|..+||..|++.++.
T Consensus 710 ei~kL~~E~~~l~~Ei~~L~~~t~~~lW~~DL~~l~~~y~k 750 (760)
T d1bjta_ 710 RYQKLLKQKQEKETELENLLKLSAKDIWNTDLKAFEVGYQE 750 (760)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 45666666666666666555544444555556555555544
No 39
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.87 E-value=83 Score=19.15 Aligned_cols=29 Identities=14% Similarity=0.208 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 030090 144 RIMNEISTLERKGAKLLEENKNLKQKVRL 172 (183)
Q Consensus 144 ll~~~i~~l~~k~~~l~~~n~~L~~~~~~ 172 (183)
-+..++..|..+|..|-+--..+++.+..
T Consensus 5 ~L~~El~~L~~~E~~LD~li~~~~~~L~~ 33 (101)
T d2azeb1 5 GLTQDLRQLQESEQQLDHLMNICTTQLRL 33 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555555555444444443
No 40
>d1zpsa1 b.168.1.1 (A:8-131) Phosphoribosyl-AMP cyclohydrolase HisI {Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=20.41 E-value=6.8 Score=25.60 Aligned_cols=38 Identities=24% Similarity=0.371 Sum_probs=29.9
Q ss_pred ccccccccccchhhhh---------HHhhhhhcCcceEEEEecCCCc
Q 030090 16 ARQVTFSKRRRGLFKK---------AEELSVLCDAEVGVIIFSATGK 53 (183)
Q Consensus 16 ~R~~Tf~KRr~GL~KK---------A~ELs~LCd~~vavivfs~~gk 53 (183)
....-||+-|+.|-.| +.|+.+-||.|+-++...+.|.
T Consensus 47 g~~~y~SRSR~~lW~KGetSG~~q~v~~i~~DCD~D~ll~~V~q~G~ 93 (124)
T d1zpsa1 47 GTAHYWSTSRGKLWLKGESSGHVQRVKDVLVDCDGDAVVLKVEQEGG 93 (124)
T ss_dssp SBCEEEETTTTEEEETTTTTSCCEEEEEEEECTTSSEEEEEEEESSC
T ss_pred CcEEEEEhhhhhhhhhhhhcCCeeEEEEEEcCCCCCEEEEEEecccc
Confidence 3445577777767665 5789999999999999999884
No 41
>d1wika_ c.47.1.1 (A:) Thioredoxin-like protein 2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=20.23 E-value=37 Score=20.89 Aligned_cols=28 Identities=14% Similarity=0.242 Sum_probs=19.7
Q ss_pred eEEEEecCCCcccccCc--chhHHHHHHhh
Q 030090 43 VGVIIFSATGKLFESSS--SSMKDIIARYN 70 (183)
Q Consensus 43 vavivfs~~gk~~~~~s--~~v~~vl~RY~ 70 (183)
-.||||+-+..-..+|. ..+..+++.+.
T Consensus 15 ~~VvvF~Kgt~~~p~Cp~c~~ak~lL~~~~ 44 (109)
T d1wika_ 15 ASVMLFMKGNKQEAKCGFSKQILEILNSTG 44 (109)
T ss_dssp SSEEEEESSTTTCCCSSTHHHHHHHHHHTC
T ss_pred CCEEEEeCCCCCCCCChHHHHHHHHHHhcC
Confidence 35899997654444554 68889998765
No 42
>d1nu9c1 a.8.6.1 (C:1-145) Staphylocoagulase {Staphylococcus aureus [TaxId: 1280]}
Probab=20.05 E-value=65 Score=21.01 Aligned_cols=26 Identities=19% Similarity=0.282 Sum_probs=22.8
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHH
Q 030090 113 EDLHGLTIEELQHLETMLEQGLSRVL 138 (183)
Q Consensus 113 e~l~~Ls~~eL~~Le~~Le~~L~~IR 138 (183)
-+|.+|++.|...+...|..|+...+
T Consensus 108 y~v~~LTm~EyN~I~~sLk~Ave~F~ 133 (145)
T d1nu9c1 108 YTIEDLTMREYNELTESLKSAVKDFE 133 (145)
T ss_dssp CCCCCCBHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHcCHHHHHHHHHHHHHHHHHHH
Confidence 37999999999999999999987654
Done!