Query 030092
Match_columns 183
No_of_seqs 169 out of 1319
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 13:22:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030092.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030092hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ayz_A UBC2, ubiquitin-conjuga 100.0 2.8E-52 9.7E-57 325.2 17.4 150 1-152 1-154 (169)
2 2aak_A UBC1, ubiquitin conjuga 100.0 3.2E-49 1.1E-53 303.1 18.2 147 1-149 1-151 (152)
3 4gpr_A Ubiquitin-conjugating e 100.0 4.7E-49 1.6E-53 301.9 18.1 144 4-149 5-151 (151)
4 2bep_A Ubiquitin-conjugating e 100.0 4.7E-49 1.6E-53 304.3 17.7 148 1-149 5-159 (159)
5 2c2v_B Ubiquitin-conjugating e 100.0 1.7E-49 5.8E-54 305.3 15.0 147 1-149 2-152 (154)
6 1zdn_A Ubiquitin-conjugating e 100.0 5.9E-49 2E-53 303.4 16.0 142 4-147 14-158 (158)
7 3k9o_A Ubiquitin-conjugating e 100.0 9.4E-49 3.2E-53 313.0 17.6 150 1-151 2-158 (201)
8 2r0j_A Ubiquitin carrier prote 100.0 1.4E-48 4.9E-53 298.6 16.2 144 4-149 2-148 (149)
9 1z2u_A Ubiquitin-conjugating e 100.0 3.1E-48 1.1E-52 297.0 18.0 143 4-148 5-150 (150)
10 1jat_A Ubiquitin-conjugating e 100.0 9.4E-49 3.2E-53 301.4 15.1 148 2-151 4-154 (155)
11 1fxt_A Ubiquitin-conjugating e 100.0 6.9E-49 2.4E-53 300.3 14.2 144 4-148 2-149 (149)
12 2ayv_A Ubiquitin-conjugating e 100.0 3.8E-48 1.3E-52 301.1 18.5 142 4-147 22-166 (166)
13 2ucz_A UBC7, ubiquitin conjuga 100.0 2.2E-48 7.6E-53 302.1 17.0 146 1-148 1-164 (165)
14 2onu_A Ubiquitin-conjugating e 100.0 1.8E-49 6.2E-54 304.6 10.4 149 3-151 2-150 (152)
15 2c4o_A Ubiquitin-conjugating e 100.0 7E-48 2.4E-52 299.4 18.1 143 4-148 20-165 (165)
16 2gjd_A Ubiquitin-conjugating e 100.0 5.7E-48 1.9E-52 297.7 17.3 146 1-148 1-157 (157)
17 2e2c_A Ubiquitin conjugating e 100.0 6.8E-48 2.3E-52 296.9 17.6 142 4-148 10-154 (156)
18 2pwq_A Ubiquitin conjugating e 100.0 2.8E-48 9.4E-53 313.0 16.1 149 4-153 24-175 (216)
19 3h8k_A Ubiquitin-conjugating e 100.0 1.3E-47 4.6E-52 297.4 18.4 143 4-148 4-163 (164)
20 1yh2_A HSPC150 protein similar 100.0 1.5E-47 5.2E-52 298.5 18.4 146 4-151 5-157 (169)
21 2f4z_A Tgtwinscan_2721 - E2 do 100.0 1.2E-47 4E-52 304.7 17.6 144 4-148 33-192 (193)
22 3bzh_A Ubiquitin-conjugating e 100.0 1.2E-47 4.2E-52 304.9 16.8 143 4-148 49-194 (194)
23 3rcz_B SUMO-conjugating enzyme 100.0 2E-47 6.9E-52 296.2 17.6 143 4-148 11-163 (163)
24 2grr_A Ubiquitin-conjugating e 100.0 1.7E-47 5.8E-52 296.1 16.8 147 1-149 4-161 (161)
25 3e46_A Ubiquitin-conjugating e 100.0 2.3E-47 7.8E-52 313.9 17.6 150 1-151 54-210 (253)
26 2z5d_A Ubiquitin-conjugating e 100.0 3.9E-48 1.3E-52 304.1 11.7 149 4-153 26-174 (179)
27 1i7k_A Ubiquitin-conjugating e 100.0 2.5E-47 8.6E-52 299.6 15.8 144 4-150 31-177 (179)
28 1tte_A Ubiquitin-conjugating e 100.0 2E-47 6.7E-52 307.9 13.2 150 2-152 1-154 (215)
29 1wzv_A Ubiquitin-conjugating e 100.0 9.2E-47 3.1E-51 290.3 16.2 144 4-150 5-153 (155)
30 3fn1_B NEDD8-conjugating enzym 100.0 4.1E-46 1.4E-50 289.8 16.5 143 3-148 14-167 (167)
31 1yrv_A Ubiquitin-conjugating l 100.0 1.6E-46 5.4E-51 292.7 14.1 143 1-145 20-168 (169)
32 3rz3_A Ubiquitin-conjugating e 100.0 6.1E-46 2.1E-50 292.8 16.3 147 1-149 3-174 (183)
33 2y9m_A Ubiquitin-conjugating e 100.0 9.7E-46 3.3E-50 289.1 16.8 147 1-148 3-168 (172)
34 1yf9_A Ubiquitin carrier prote 100.0 1.5E-46 5.1E-51 293.4 12.0 150 4-154 13-162 (171)
35 1y8x_A Ubiquitin-conjugating e 100.0 1.4E-45 4.7E-50 285.1 16.7 143 1-146 4-148 (160)
36 1c4z_D UBCH7, ubiquitin conjug 100.0 1.1E-45 3.8E-50 284.0 11.5 145 4-151 3-152 (154)
37 2nvu_C NEDD8-conjugating enzym 100.0 1E-44 3.5E-49 285.1 16.2 140 4-146 27-168 (180)
38 2awf_A Ubiquitin-conjugating e 100.0 4.3E-45 1.5E-49 285.4 13.6 137 4-142 18-172 (172)
39 4ddg_A Ubiquitin-conjugating e 100.0 7.4E-44 2.5E-48 310.4 17.0 147 3-151 3-152 (399)
40 3o2u_A NEDD8-conjugating enzym 100.0 6.6E-44 2.3E-48 282.7 15.1 143 2-147 28-178 (190)
41 4ds2_A Ubiquitin-conjugating e 100.0 1.2E-43 4.1E-48 276.0 12.6 139 1-140 5-163 (167)
42 3ceg_A Baculoviral IAP repeat- 100.0 9.5E-41 3.2E-45 282.1 13.0 154 4-159 77-254 (323)
43 2fo3_A Ubiquitin-conjugating e 100.0 6.3E-40 2.1E-44 243.9 12.2 115 1-117 4-122 (125)
44 2q0v_A Ubiquitin-conjugating e 100.0 6.5E-40 2.2E-44 252.3 8.8 126 3-131 21-156 (156)
45 1jat_B Ubiquitin-conjugating e 100.0 2.3E-40 7.9E-45 250.1 5.7 126 1-128 2-138 (138)
46 2h2y_A Ubiquitin-conjugating e 100.0 8.2E-39 2.8E-43 241.1 14.1 114 1-116 18-135 (136)
47 2a4d_A Ubiquitin-conjugating e 100.0 6.3E-39 2.1E-43 247.6 10.4 121 4-125 26-156 (160)
48 2a7l_A Hypothetical ubiquitin- 100.0 3.7E-38 1.3E-42 237.5 10.8 110 1-112 20-136 (136)
49 2hlw_A Ubiquitin-conjugating e 100.0 3E-38 1E-42 246.1 8.6 121 4-125 36-166 (170)
50 2f4w_A Ubiquitin-conjugating e 100.0 2E-35 6.9E-40 233.4 14.8 137 4-144 15-160 (187)
51 1zuo_A Hypothetical protein LO 100.0 2.7E-37 9.3E-42 243.9 1.9 139 1-149 24-183 (186)
52 2z6o_A UFM1-conjugating enzyme 99.9 1.5E-27 5.2E-32 182.8 0.0 112 5-129 34-160 (172)
53 3r3q_A Suppressor protein STP2 99.8 6.6E-19 2.2E-23 135.5 8.1 110 6-118 31-161 (162)
54 3kpa_A Probable ubiquitin fold 99.7 1.8E-18 6E-23 130.0 -0.8 92 5-103 36-145 (168)
55 3obq_A Tumor susceptibility ge 99.4 9.9E-14 3.4E-18 104.9 6.5 78 27-112 51-137 (146)
56 2ebm_A RWD domain-containing p 96.5 0.008 2.7E-07 43.3 7.1 68 1-70 8-78 (128)
57 2yz0_A Serine/threonine-protei 94.7 0.12 4.3E-06 37.3 7.4 41 29-70 45-85 (138)
58 3zqs_A E3 ubiquitin-protein li 94.5 0.28 9.6E-06 37.9 9.2 77 7-105 5-81 (186)
59 2day_A Ring finger protein 25; 94.3 0.31 1.1E-05 34.7 8.6 65 6-70 11-82 (128)
60 2ebk_A RWD domain-containing p 93.7 0.24 8.3E-06 35.3 7.1 63 6-69 10-78 (128)
61 2daw_A RWD domain containing p 92.5 0.73 2.5E-05 34.1 8.3 23 48-70 76-98 (154)
62 1ukx_A GCN2, GCN2 EIF2alpha ki 92.3 0.58 2E-05 33.6 7.5 66 4-70 11-86 (137)
63 2dax_A Protein C21ORF6; RWD do 88.6 0.37 1.3E-05 35.5 3.5 23 48-70 74-96 (152)
64 2cwb_A Chimera of immunoglobul 84.4 0.23 7.9E-06 35.1 0.4 40 114-153 21-60 (108)
65 2byk_A Chrac-16; nucleosome sl 31.3 64 0.0022 23.3 4.4 29 119-147 37-65 (140)
66 3rls_A YAF9, protein AF-9 homo 29.1 1.2E+02 0.004 22.9 5.6 43 27-71 30-72 (175)
67 3qrl_A Transcription initiatio 27.8 1.2E+02 0.0041 22.0 5.3 43 29-73 32-77 (140)
68 2rp4_A Transcription factor P5 27.8 1.2E+02 0.0042 19.4 5.5 22 29-57 9-30 (76)
69 2zd7_A VPS75, vacuolar protein 26.1 18 0.0006 29.1 0.6 29 48-78 102-130 (264)
70 2bum_A Protocatechuate 3,4-dio 25.1 64 0.0022 24.9 3.6 26 45-70 109-139 (209)
No 1
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=2.8e-52 Score=325.21 Aligned_cols=150 Identities=29% Similarity=0.635 Sum_probs=143.5
Q ss_pred CCC-HHHHHHHHHHhc---CCCCcEEEeecCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecccccce
Q 030092 1 MSS-PSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPN 76 (183)
Q Consensus 1 Mss-~~kRl~kEl~~l---~~~gi~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 76 (183)
||+ +.+||++||+.+ ++.|+++.+.++|+++|+++|.||++|||+||+|+|.|.||++||++||+|+|+|+|||||
T Consensus 1 Ms~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPN 80 (169)
T 1ayz_A 1 MSTPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPN 80 (169)
T ss_dssp -CCHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccCC
Confidence 887 899999999987 7789999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCCeeEccCCCCCCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcccccc
Q 030092 77 IDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKEYREKYAKAEDI 152 (183)
Q Consensus 77 V~~~~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~r~~~~~~a~~~~~ 152 (183)
|+. +|.||+++|.+.|+|+++|.+||++ |++||.+|++++|+|.+||++|++|+++|.++||+|+++||+....
T Consensus 81 I~~-~G~ICl~iL~~~WsP~~~i~~vL~s-i~~ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~~r~~~~~~a~~~~~ 154 (169)
T 1ayz_A 81 VYA-NGEICLDILQNRWTPTYDVASILTS-IQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWEDDMD 154 (169)
T ss_dssp BCT-TSBBCCGGGTTTCCTTCCHHHHHHH-HHHHHTCCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCC-CCeEeehhhccCCCCcCcHHHHHHH-HHHHHhCCCCCcHHHHHHHHHHHHCHHHHHHHHHHHHHHHcCCCcc
Confidence 996 9999999999999999999999988 9999999999999999999999999999999999999999987653
No 2
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=3.2e-49 Score=303.14 Aligned_cols=147 Identities=31% Similarity=0.681 Sum_probs=141.8
Q ss_pred CCC-HHHHHHHHHHhc---CCCCcEEEeecCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecccccce
Q 030092 1 MSS-PSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPN 76 (183)
Q Consensus 1 Mss-~~kRl~kEl~~l---~~~gi~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 76 (183)
||+ +.+||++|++++ ++.|+++.+.++|+++|+++|.||++|||+||+|+|.|.||++||++||+|+|.|+|||||
T Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 80 (152)
T 2aak_A 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPN 80 (152)
T ss_dssp CCCHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccCC
Confidence 887 899999999987 6789999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCCeeEccCCCCCCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHccc
Q 030092 77 IDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKEYREKYAKA 149 (183)
Q Consensus 77 V~~~~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~r~~~~~~a~~ 149 (183)
|+. +|.||+++|.++|+|+++|.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|+++||+.
T Consensus 81 v~~-~G~iCl~iL~~~W~p~~~i~~vl~~-i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~~ 151 (152)
T 2aak_A 81 IYA-DGSICLDILQNQWSPIYDVAAILTS-IQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQSWTA 151 (152)
T ss_dssp BCT-TSBBCCGGGTTSCCTTCCHHHHHHH-HHHHHTSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCC-
T ss_pred CCC-CCEEechhhcCCCCCCCcHHHHHHH-HHHHHhCCCCCccccHHHHHHHHHCHHHHHHHHHHHHHHHccc
Confidence 996 9999999999999999999999988 9999999999999999999999999999999999999999975
No 3
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=4.7e-49 Score=301.93 Aligned_cols=144 Identities=34% Similarity=0.756 Sum_probs=139.9
Q ss_pred HHHHHHHHHHhc---CCCCcEEEeecCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecccccceeeCC
Q 030092 4 PSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEM 80 (183)
Q Consensus 4 ~~kRl~kEl~~l---~~~gi~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~~ 80 (183)
|.+||++|++.+ ++.|+++.+.++|+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|+||||||+.
T Consensus 5 a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~- 83 (151)
T 4gpr_A 5 AMRRIQKELREIQQDPPCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPNINK- 83 (151)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT-
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccceECC-
Confidence 789999999987 7789999999999999999999999999999999999999999999999999999999999995
Q ss_pred CCeeEccCCCCCCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHccc
Q 030092 81 SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKEYREKYAKA 149 (183)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~r~~~~~~a~~ 149 (183)
+|.||+++|.++|+|+++|.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|+++||+.
T Consensus 84 ~G~iCl~iL~~~W~p~~~i~~vl~~-i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~ya~p 151 (151)
T 4gpr_A 84 NGVICLDILKDQWSPALTLSRVLLS-ISSLLTDPNPSDPLDPEVANVLRANKKQFEDTAREWTRMYARP 151 (151)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHH-HHHHHHCCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCCC
T ss_pred CCEEEcccccCCCCCCCcHHHHHHH-HHHHhcCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999998 9999999999999999999999999999999999999999973
No 4
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=4.7e-49 Score=304.28 Aligned_cols=148 Identities=27% Similarity=0.673 Sum_probs=141.7
Q ss_pred CCC-HHHHHHHHHHhc------CCCCcEEEeecCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecccc
Q 030092 1 MSS-PSKRREMDLMKL------MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIY 73 (183)
Q Consensus 1 Mss-~~kRl~kEl~~l------~~~gi~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 73 (183)
|++ +.+||++|++++ ++.|+++.+.++|+++|+++|.||++|||+||+|+|.|.||++||++||+|+|.|+||
T Consensus 5 Ms~~a~~RL~kEl~~l~~~~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 84 (159)
T 2bep_A 5 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 84 (159)
T ss_dssp CCHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred chHHHHHHHHHHHHHHHhcCCCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCCC
Confidence 665 889999999987 3679999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeCCCCeeEccCCCCCCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHccc
Q 030092 74 HPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKEYREKYAKA 149 (183)
Q Consensus 74 HPnV~~~~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~r~~~~~~a~~ 149 (183)
||||+..+|.||+++|.++|+|+++|.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|+++||++
T Consensus 85 HPni~~~~G~iCl~iL~~~W~p~~~i~~vl~~-i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 159 (159)
T 2bep_A 85 HPNISSVTGAICLDILKDQWAAAMTLRTVLLS-LQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 159 (159)
T ss_dssp BTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHH-HHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred ccCCCCCCCEEeChhhhccCCCCCcHHHHHHH-HHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhhcC
Confidence 99999668999999999999999999999998 9999999999999999999999999999999999999999974
No 5
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.7e-49 Score=305.29 Aligned_cols=147 Identities=31% Similarity=0.633 Sum_probs=139.2
Q ss_pred CCC-HHHHHHHHHHhc---CCCCcEEEeecCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecccccce
Q 030092 1 MSS-PSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPN 76 (183)
Q Consensus 1 Mss-~~kRl~kEl~~l---~~~gi~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 76 (183)
||. +.+||++|++++ ++.|+++.+.++|+++|+++|.||++|||+||+|+|.|.||++||++||+|+|.|+|||||
T Consensus 2 ~s~~~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 81 (154)
T 2c2v_B 2 GSAGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPN 81 (154)
T ss_dssp CSCSCCHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTT
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCc
Confidence 454 789999999987 7789999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCCeeEccCCCCCCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHccc
Q 030092 77 IDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKEYREKYAKA 149 (183)
Q Consensus 77 V~~~~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~r~~~~~~a~~ 149 (183)
|+. +|.||+++|.++|+|+++|.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|+++||+.
T Consensus 82 v~~-~G~iCl~iL~~~W~p~~~i~~vl~~-i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~~a~~ 152 (154)
T 2c2v_B 82 VDK-LGRICLDILKDKWSPALQIRTVLLS-IQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAMN 152 (154)
T ss_dssp BCT-TCBBCCHHHHTSCCTTCCHHHHHHH-HHHHTTSCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred Ccc-CCeEEchhccCCCCCCCcHHHHHHH-HHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Confidence 995 8999999999999999999999988 9999999999999999999999999999999999999999985
No 6
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=5.9e-49 Score=303.44 Aligned_cols=142 Identities=27% Similarity=0.562 Sum_probs=138.0
Q ss_pred HHHHHHHHHHhc---CCCCcEEEeecCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecccccceeeCC
Q 030092 4 PSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEM 80 (183)
Q Consensus 4 ~~kRl~kEl~~l---~~~gi~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~~ 80 (183)
+.+||++|++.+ ++.|+++.+.++|+++|+++|.||++|||+||+|+|.|.||++||++||+|+|.|+||||||+.
T Consensus 14 ~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~- 92 (158)
T 1zdn_A 14 IIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGA- 92 (158)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCT-
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccCCCCC-
Confidence 679999999987 7889999999999999999999999999999999999999999999999999999999999995
Q ss_pred CCeeEccCCCCCCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHc
Q 030092 81 SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKEYREKYA 147 (183)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~r~~~~~~a 147 (183)
+|.||+++|.++|+|+++|.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+||++||
T Consensus 93 ~G~iCl~iL~~~W~p~~~i~~vL~~-i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~a~~~t~~~A 158 (158)
T 1zdn_A 93 NGEICVNVLKRDWTAELGIRHVLLT-IKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTEIHG 158 (158)
T ss_dssp TSBBCHHHHTTTCCTTCCHHHHHHH-HHHHHHSCCGGGCSSHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCEEehhhcCCCCCCCCcHHHHHHH-HHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 7999999999999999999999998 99999999999999999999999999999999999999997
No 7
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=9.4e-49 Score=313.03 Aligned_cols=150 Identities=27% Similarity=0.656 Sum_probs=142.3
Q ss_pred CCC-HHHHHHHHHHhc------CCCCcEEEeecCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecccc
Q 030092 1 MSS-PSKRREMDLMKL------MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIY 73 (183)
Q Consensus 1 Mss-~~kRl~kEl~~l------~~~gi~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 73 (183)
||+ +.+||++|++.+ ++.|+++.+.++|+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|+||
T Consensus 2 Ms~~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 81 (201)
T 3k9o_A 2 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 81 (201)
T ss_dssp --CTTHHHHHHHHHHHHTCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCcc
Confidence 887 899999999987 2579999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeCCCCeeEccCCCCCCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHccccc
Q 030092 74 HPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKEYREKYAKAED 151 (183)
Q Consensus 74 HPnV~~~~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~r~~~~~~a~~~~ 151 (183)
||||+..+|.||+++|.++|+|+++|.+||++ |++||.+|++++|+|.+||++|++|+++|.++||+|+++||+++.
T Consensus 82 HPnv~~~~G~iCl~iL~~~W~p~~~i~~vL~~-i~~ll~~p~p~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~~~ 158 (201)
T 3k9o_A 82 HPNISSVTGAICLDILKDQWAAAMTLRTVLLS-LQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGAPV 158 (201)
T ss_dssp BTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHH-HHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCC
T ss_pred cCCCcCCCCeeeCcccccCCCCCCCHHHHHHH-HHHHhcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccccc
Confidence 99999669999999999999999999999988 999999999999999999999999999999999999999999754
No 8
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=1.4e-48 Score=298.59 Aligned_cols=144 Identities=30% Similarity=0.680 Sum_probs=139.1
Q ss_pred HHHHHHHHHHhc---CCCCcEEEeecCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecccccceeeCC
Q 030092 4 PSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEM 80 (183)
Q Consensus 4 ~~kRl~kEl~~l---~~~gi~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~~ 80 (183)
+.+||++|++++ ++.|+++.+.++|+++|+++|.||++|||+||+|+|.|.||++||++||+|+|.|+||||||+.
T Consensus 2 ~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~- 80 (149)
T 2r0j_A 2 IPRRITKETQNLANEPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDK- 80 (149)
T ss_dssp CCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCT-
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCC-
Confidence 358999999987 7789999999999999999999999999999999999999999999999999999999999995
Q ss_pred CCeeEccCCCCCCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHccc
Q 030092 81 SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKEYREKYAKA 149 (183)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~r~~~~~~a~~ 149 (183)
+|.||+++|.++|+|+++|.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|+++||+.
T Consensus 81 ~G~iCl~iL~~~W~p~~~i~~vl~~-i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 148 (149)
T 2r0j_A 81 LGRICLDILKDKWSPALQIRTVLLS-IQALLSSPEPDDPLDSKVAEHFKQDKNDAEHVARQWNKIYANN 148 (149)
T ss_dssp TCBBCCGGGTTTCCTTSCHHHHHHH-HHHHHHSCCTTSCSSCHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEechhcCCCCCCCCcHHHHHHH-HHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHHccC
Confidence 8999999999999999999999988 9999999999999999999999999999999999999999975
No 9
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=3.1e-48 Score=297.04 Aligned_cols=143 Identities=37% Similarity=0.746 Sum_probs=138.9
Q ss_pred HHHHHHHHHHhc---CCCCcEEEeecCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecccccceeeCC
Q 030092 4 PSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEM 80 (183)
Q Consensus 4 ~~kRl~kEl~~l---~~~gi~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~~ 80 (183)
+.+||++|++++ ++.|+++.+.++|+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|+||||||+.
T Consensus 5 ~~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~- 83 (150)
T 1z2u_A 5 ALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS- 83 (150)
T ss_dssp HHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT-
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcCCC-
Confidence 789999999987 7789999999999999999999999999999999999999999999999999999999999995
Q ss_pred CCeeEccCCCCCCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcc
Q 030092 81 SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKEYREKYAK 148 (183)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~r~~~~~~a~ 148 (183)
+|.||+++|.++|+|+++|.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 84 ~G~iCl~iL~~~W~p~~~i~~vl~~-i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 150 (150)
T 1z2u_A 84 NGSICLDILRSQWSPALTISKVLLS-ICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQKYAM 150 (150)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHH-HHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCeEeeccccCCCCCCCCHHHHHHH-HHHHhhCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999988 999999999999999999999999999999999999999985
No 10
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=9.4e-49 Score=301.42 Aligned_cols=148 Identities=35% Similarity=0.701 Sum_probs=141.9
Q ss_pred CCHHHHHHHHHHhc---CCCCcEEEeecCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecccccceee
Q 030092 2 SSPSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNID 78 (183)
Q Consensus 2 ss~~kRl~kEl~~l---~~~gi~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~ 78 (183)
+++.+||++|++.+ ++.|+++.+.++|+++|+++|.||++|||+||+|+|.|.||++||++||+|+|+|+||||||+
T Consensus 4 ~~~~~RL~kE~~~l~~~~~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 83 (155)
T 1jat_A 4 ASLPKRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNID 83 (155)
T ss_dssp CSCCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTBC
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCCC
Confidence 34789999999987 788999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeeEccCCCCCCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHccccc
Q 030092 79 EMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKEYREKYAKAED 151 (183)
Q Consensus 79 ~~~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~r~~~~~~a~~~~ 151 (183)
.+|.||+++|.++|+|+++|.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|+++||+.+.
T Consensus 84 -~~G~iCl~iL~~~W~p~~~i~~vl~~-i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~r~~~~~~a~~~~ 154 (155)
T 1jat_A 84 -RLGRICLDVLKTNWSPALQIRTVLLS-IQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLYAKKKP 154 (155)
T ss_dssp -TTCCBCCGGGTTTCCTTCCHHHHHHH-HHHHHHSCCTTSTTCCTTHHHHHHCHHHHHHHHHHHHHHHSEECC
T ss_pred -CCCEEEchhhccCCCCCCCHHHHHHH-HHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcccCC
Confidence 69999999999999999999999988 999999999999999999999999999999999999999998754
No 11
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=6.9e-49 Score=300.32 Aligned_cols=144 Identities=32% Similarity=0.712 Sum_probs=138.7
Q ss_pred HHHHHHHHHHhc---CCCCcEEEeecC-CcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecccccceeeC
Q 030092 4 PSKRREMDLMKL---MMSDYKVEMIND-GIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDE 79 (183)
Q Consensus 4 ~~kRl~kEl~~l---~~~gi~v~~~~~-~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~ 79 (183)
+.+||++|++.+ +++|+++.+.++ |+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|+||||||+.
T Consensus 2 ~~~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~ 81 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISS 81 (149)
T ss_dssp CHHHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBCS
T ss_pred hHHHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCcC
Confidence 469999999987 678999999887 9999999999999999999999999999999999999999999999999996
Q ss_pred CCCeeEccCCCCCCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcc
Q 030092 80 MSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKEYREKYAK 148 (183)
Q Consensus 80 ~~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~r~~~~~~a~ 148 (183)
.+|.||+++|.++|+|+++|.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 82 ~~G~iCl~iL~~~W~p~~~i~~vl~~-i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~a~~~~~~~a~ 149 (149)
T 1fxt_A 82 VTGAICLDILKNAWSPVITLKSALIS-LQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYAS 149 (149)
T ss_dssp SSCCBCCHHHHTSCCTTCCHHHHHHH-HHHHHHSCCSSSCSSHHHHHHHHHCSSHHHHHHHHHHHHHCC
T ss_pred CCCeEeCCcCCCCCCCCCcHHHHHHH-HHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 69999999999999999999999988 999999999999999999999999999999999999999985
No 12
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=3.8e-48 Score=301.11 Aligned_cols=142 Identities=37% Similarity=0.772 Sum_probs=138.2
Q ss_pred HHHHHHHHHHhc---CCCCcEEEeecCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecccccceeeCC
Q 030092 4 PSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEM 80 (183)
Q Consensus 4 ~~kRl~kEl~~l---~~~gi~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~~ 80 (183)
+.+||++|++.+ ++.|+++.+.++|++.|.++|.||++|||+||+|+|.|.||++||++||+|+|+|+||||||+.
T Consensus 22 ~~~RL~kEl~~l~~~~~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~- 100 (166)
T 2ayv_A 22 ALKRINKELNDLSKDPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPNINS- 100 (166)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCT-
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCCcCCC-
Confidence 689999999987 7789999999999999999999999999999999999999999999999999999999999995
Q ss_pred CCeeEccCCCCCCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHc
Q 030092 81 SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKEYREKYA 147 (183)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~r~~~~~~a 147 (183)
+|.||+++|.++|+|+++|.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|+++||
T Consensus 101 ~G~ICL~iL~~~WsP~~ti~~vL~s-I~sll~~pn~~~Pln~~aa~l~~~d~~~f~~~ar~~~~~~A 166 (166)
T 2ayv_A 101 QGAICLDILKDQWSPALTISKVLLS-ISSLLTDPNPDDPLVPEIAHLYKSDRMRYDQTAREWSQKYA 166 (166)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHH-HHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCeEEcccccccCCCCCcHHHHHHH-HHHHHhCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999998 99999999999999999999999999999999999999997
No 13
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=2.2e-48 Score=302.12 Aligned_cols=146 Identities=29% Similarity=0.500 Sum_probs=139.0
Q ss_pred CCC-HHHHHHHHHHhc---CCCCcEEEeec-CCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecccccc
Q 030092 1 MSS-PSKRREMDLMKL---MMSDYKVEMIN-DGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHP 75 (183)
Q Consensus 1 Mss-~~kRl~kEl~~l---~~~gi~v~~~~-~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 75 (183)
||+ +.+||++|++.+ ++.|+++.+.+ +|+++|+++|.||++|||+||+|+|.|.||++||++||+|+|+|+||||
T Consensus 1 M~~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 80 (165)
T 2ucz_A 1 MSKTAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHP 80 (165)
T ss_dssp -CHHHHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSCT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCccC
Confidence 887 899999999987 77899999976 6999999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCeeEccCC-------------CCCCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHH
Q 030092 76 NIDEMSGSVCLDVI-------------NQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKEY 142 (183)
Q Consensus 76 nV~~~~G~icl~~l-------------~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~r~~ 142 (183)
||+. +|.||+++| .++|+|+++|.+||++ |++||.+|++++|+|.+||++|++|+++|.++||+|
T Consensus 81 Nv~~-~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~s-i~~ll~~Pn~~~p~n~~aa~~~~~~~~~y~~~v~~~ 158 (165)
T 2ucz_A 81 NIYP-NGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLS-VMSMLSEPNIESGANIDACILWRDNRPEFERQVKLS 158 (165)
T ss_dssp TBCT-TSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHH-HHHHHHSCCGGGCCCHHHHHHHHTTHHHHHHHHHHH
T ss_pred CCCC-CCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHH-HHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHH
Confidence 9995 899999999 6899999999999998 999999999999999999999999999999999999
Q ss_pred HHHHcc
Q 030092 143 REKYAK 148 (183)
Q Consensus 143 ~~~~a~ 148 (183)
+++++.
T Consensus 159 ~~~~~~ 164 (165)
T 2ucz_A 159 ILKSLG 164 (165)
T ss_dssp HHHHTT
T ss_pred HHHHhh
Confidence 999975
No 14
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=1.8e-49 Score=304.56 Aligned_cols=149 Identities=59% Similarity=1.112 Sum_probs=142.2
Q ss_pred CHHHHHHHHHHhcCCCCcEEEeecCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecccccceeeCCCC
Q 030092 3 SPSKRREMDLMKLMMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEMSG 82 (183)
Q Consensus 3 s~~kRl~kEl~~l~~~gi~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~~~G 82 (183)
++.+||+||++++...|+++.+.++|+++|+++|.||++|||+||+|++.|.||++||++||+|+|+|+||||||+..+|
T Consensus 2 sa~~Rl~kEl~~l~~~~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~~~G 81 (152)
T 2onu_A 2 TSLTRKQCDFTKLIMAGYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVDEASG 81 (152)
T ss_dssp -CCCHHHHTHHHHHHHTCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTTC
T ss_pred hHHHHHHHHHHhcCcCCCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCcCcCC
Confidence 57799999999997789999999999999999999999999999999999999999999999999999999999996689
Q ss_pred eeEccCCCCCCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHccccc
Q 030092 83 SVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKEYREKYAKAED 151 (183)
Q Consensus 83 ~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~r~~~~~~a~~~~ 151 (183)
.||+++|.++|+|+++|.+||.++|++||.+|++++|+|.+||++|++|+++|.++||+|+++||+...
T Consensus 82 ~iCl~il~~~W~p~~~i~~vl~~ii~~Ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~v~~~~~~~a~~~~ 150 (152)
T 2onu_A 82 SVCLDVINQTWTPLYSLVNVFEVFLPQLLTYPNPSDPLNSDAASLLMKDKNIYEEKVKEYVKLYASKDL 150 (152)
T ss_dssp BBCHHHHHHHCCTTCCHHHHHHTHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHSCGGG
T ss_pred eEecccccccCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccCcc
Confidence 999999999999999999999886799999999999999999999999999999999999999998754
No 15
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=7e-48 Score=299.36 Aligned_cols=143 Identities=36% Similarity=0.746 Sum_probs=138.8
Q ss_pred HHHHHHHHHHhc---CCCCcEEEeecCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecccccceeeCC
Q 030092 4 PSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEM 80 (183)
Q Consensus 4 ~~kRl~kEl~~l---~~~gi~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~~ 80 (183)
+.+||++|++++ ++.|+++.+.++|++.|.++|.||++|||+||+|+|.|.||++||++||+|+|.|+||||||+.
T Consensus 20 ~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPnV~~- 98 (165)
T 2c4o_A 20 ALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS- 98 (165)
T ss_dssp HHHHHHHHHHHHHSSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCT-
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCcCCC-
Confidence 689999999987 6789999999999999999999999999999999999999999999999999999999999995
Q ss_pred CCeeEccCCCCCCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcc
Q 030092 81 SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKEYREKYAK 148 (183)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~r~~~~~~a~ 148 (183)
+|.||+++|.++|+|+++|.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 99 ~G~ICl~iL~~~W~P~~ti~~vL~s-i~~ll~~pn~~~P~n~~aa~~~~~d~~~y~~~ar~~~~~~a~ 165 (165)
T 2c4o_A 99 NGSICLDILRSQWSPALTISKVLLS-ICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM 165 (165)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHH-HHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHTTC
T ss_pred CCeEeehhhcCCCCCcCcHHHHHHH-HHHHHhCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999998 999999999999999999999999999999999999999985
No 16
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=5.7e-48 Score=297.68 Aligned_cols=146 Identities=30% Similarity=0.561 Sum_probs=137.9
Q ss_pred CCC-HHHHHHHHHHhc---CCCCcEEEeec-----CCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecc
Q 030092 1 MSS-PSKRREMDLMKL---MMSDYKVEMIN-----DGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNK 71 (183)
Q Consensus 1 Mss-~~kRl~kEl~~l---~~~gi~v~~~~-----~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~ 71 (183)
||+ +.+||++|++.+ ++.|+++.+.. +|+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|+
T Consensus 1 Ms~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 80 (157)
T 2gjd_A 1 MSSLCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAG 80 (157)
T ss_dssp --CHHHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCC
Confidence 887 899999999887 78899999875 389999999999999999999999999999999999999999999
Q ss_pred cccceeeCCCCeeEccCCCC--CCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcc
Q 030092 72 IYHPNIDEMSGSVCLDVINQ--TWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKEYREKYAK 148 (183)
Q Consensus 72 i~HPnV~~~~G~icl~~l~~--~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~r~~~~~~a~ 148 (183)
||||||+ .+|.||+++|.. +|+|+++|.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 81 i~HPnv~-~~G~iCl~iL~~~~~W~p~~~i~~vl~~-i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~ 157 (157)
T 2gjd_A 81 FYHPNVY-PSGTICLSILNEDQDWRPAITLKQIVLG-VQDLLDSPNPNSPAQEPAWRSFSRNKAEYDKKVLLQAKQYSK 157 (157)
T ss_dssp CCCTTBC-TTSBBCCGGGCTTTTCCTTCCHHHHHHH-HHHHHTSCCTTCCCCHHHHHHHHHCHHHHHHHHHHHHHHTBC
T ss_pred CccCCCC-CCCcEeeecccCCCCCCCCCcHHHHHHH-HHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 9999999 499999999987 79999999999998 999999999999999999999999999999999999999985
No 17
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=6.8e-48 Score=296.91 Aligned_cols=142 Identities=28% Similarity=0.589 Sum_probs=137.7
Q ss_pred HHHHHHHHHHhc---CCCCcEEEeecCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecccccceeeCC
Q 030092 4 PSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEM 80 (183)
Q Consensus 4 ~~kRl~kEl~~l---~~~gi~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~~ 80 (183)
+.+||++|++.+ ++.|+++.+.++|+++|+++|.||++|||+||+|+|.|.||++||++||+|+|.|++|||||+.
T Consensus 10 ~~~RL~kEl~~l~~~~~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~- 88 (156)
T 2e2c_A 10 VSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQ- 88 (156)
T ss_dssp HHHHHHHHHHHHHHHCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT-
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCCCcc-
Confidence 789999999987 7889999999999999999999999999999999999999999999999999999999999996
Q ss_pred CCeeEccCCCCCCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcc
Q 030092 81 SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKEYREKYAK 148 (183)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~r~~~~~~a~ 148 (183)
+|.||+++|.++|+|+++|.+||.+ |++||.+|++++|+|.+||++| +|+++|.++||+|+++||.
T Consensus 89 ~G~iCl~iL~~~W~p~~~i~~vL~s-i~~ll~~pn~~~p~n~~aa~~~-~d~~~y~~~~~~~~~~~~~ 154 (156)
T 2e2c_A 89 SGNICLDILKENWTASYDVRTILLS-LQSLLGEPNNASPLNAQAADMW-SNQTEYKKVLHEKYKTAQS 154 (156)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHH-HHHHTTSCCCSSCSCHHHHHHT-TCHHHHHHHHHHHHHHHHH
T ss_pred CceEECccccccCCCCCcHHHHHHH-HHHHHhCCCCCCHHHHHHHHHh-cCHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999988 9999999999999999999999 8999999999999999985
No 18
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=2.8e-48 Score=313.04 Aligned_cols=149 Identities=28% Similarity=0.643 Sum_probs=141.7
Q ss_pred HHHHHHHHHHhc---CCCCcEEEeecCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecccccceeeCC
Q 030092 4 PSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEM 80 (183)
Q Consensus 4 ~~kRl~kEl~~l---~~~gi~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~~ 80 (183)
+.+||++|++.+ +++|+++.+.++|+++|+++|.||++|||+||+|+|.|.||++||++||+|+|.|+||||||+..
T Consensus 24 a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~~ 103 (216)
T 2pwq_A 24 ELLRLQKELKDIENENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHPNISSQ 103 (216)
T ss_dssp HHHHHHHHHHHHHHSCTTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcCCCCcCC
Confidence 789999999987 67899999999999999999999999999999999999999999999999999999999999966
Q ss_pred CCeeEccCCCCCCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHccccccc
Q 030092 81 SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKEYREKYAKAEDIE 153 (183)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~r~~~~~~a~~~~~~ 153 (183)
+|.||+++|+++|+|+++|.+||++ |++||.+|++++|+|.+||++|++|+++|.++||+|+++||+.+...
T Consensus 104 ~G~ICL~iL~~~WsP~~ti~~VL~s-I~sLL~~Pnp~dPln~eaa~~~~~d~~~f~~~ar~~t~~ya~~~~~~ 175 (216)
T 2pwq_A 104 TGAICLDVLKNEWSPALTIRTALLS-IQALLSDPQPDDPQDAEVAKMYKENHALFVKTASVWTKTFATGPKEE 175 (216)
T ss_dssp TCBBCCHHHHHHCCTTCCHHHHHHH-HHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCCC---
T ss_pred CCEEEchhhcccCCCCCcHHHHHHH-HHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcCCCccc
Confidence 8999999999999999999999998 99999999999999999999999999999999999999999987543
No 19
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=1.3e-47 Score=297.37 Aligned_cols=143 Identities=23% Similarity=0.444 Sum_probs=137.6
Q ss_pred HHHHHHHHHHhc---CCCCcEEEeecC-CcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecccccceeeC
Q 030092 4 PSKRREMDLMKL---MMSDYKVEMIND-GIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDE 79 (183)
Q Consensus 4 ~~kRl~kEl~~l---~~~gi~v~~~~~-~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~ 79 (183)
|.+||++||+.+ ++.|+++.+.++ |+++|+++|.||++|||+||+|+|.|.||++||++||+|+|.|+||||||+.
T Consensus 4 a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNV~~ 83 (164)
T 3h8k_A 4 ALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYP 83 (164)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCCCCC
Confidence 889999999987 778999999876 9999999999999999999999999999999999999999999999999994
Q ss_pred CCCeeEccCCC-------------CCCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHH
Q 030092 80 MSGSVCLDVIN-------------QTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKEYREKY 146 (183)
Q Consensus 80 ~~G~icl~~l~-------------~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~r~~~~~~ 146 (183)
+|.||+++|. ++|+|+++|.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|++++
T Consensus 84 -~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~-i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~s 161 (164)
T 3h8k_A 84 -DGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLS-VVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQKS 161 (164)
T ss_dssp -TSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHH-HHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred -CCcEeeecccCcccccccccccccCCCCCCcHHHHHHH-HHHHHcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHh
Confidence 9999999997 789999999999998 9999999999999999999999999999999999999999
Q ss_pred cc
Q 030092 147 AK 148 (183)
Q Consensus 147 a~ 148 (183)
+.
T Consensus 162 ~~ 163 (164)
T 3h8k_A 162 LG 163 (164)
T ss_dssp HT
T ss_pred hc
Confidence 75
No 20
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.5e-47 Score=298.55 Aligned_cols=146 Identities=29% Similarity=0.637 Sum_probs=140.5
Q ss_pred HHHHHHHHHHhc---CCCCcEEEeecCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecccccceeeCC
Q 030092 4 PSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEM 80 (183)
Q Consensus 4 ~~kRl~kEl~~l---~~~gi~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~~ 80 (183)
+.+||++|++++ ++.|+++.+.++|+++|+++|.||++|||+||+|+|.|.||++||++||+|+|.|+||||||+ .
T Consensus 5 ~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~-~ 83 (169)
T 1yh2_A 5 RASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNID-S 83 (169)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBC-T
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccCC-c
Confidence 789999999987 678999999999999999999999999999999999999999999999999999999999999 5
Q ss_pred CCeeEccCCC----CCCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHccccc
Q 030092 81 SGSVCLDVIN----QTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKEYREKYAKAED 151 (183)
Q Consensus 81 ~G~icl~~l~----~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~r~~~~~~a~~~~ 151 (183)
+|.||+++|+ ++|+|+++|.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|+++||+...
T Consensus 84 ~G~iCl~iL~~~~~~~W~p~~~i~~vL~s-i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~~~ 157 (169)
T 1yh2_A 84 AGRICLDVLKLPPKGAWRPSLNIATVLTS-IQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEKHARQKQ 157 (169)
T ss_dssp TCBBCCGGGSCTTTSCCCTTSCHHHHHHH-HHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCCC-
T ss_pred CCeEecccccCCcccCCCCCCcHHHHHHH-HHHHHhCCCCcchHhHHHHHHHHhhHHHHHHHHHHHHHHHccccc
Confidence 9999999998 899999999999988 999999999999999999999999999999999999999999654
No 21
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=1.2e-47 Score=304.72 Aligned_cols=144 Identities=28% Similarity=0.665 Sum_probs=137.1
Q ss_pred HHHHHHHHHHhc---CC-------------CCcEEEeecCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcee
Q 030092 4 PSKRREMDLMKL---MM-------------SDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIG 67 (183)
Q Consensus 4 ~~kRl~kEl~~l---~~-------------~gi~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~ 67 (183)
+.+||++||+.+ ++ .||++.+.++|+++|+++|.||++|||+||+|+|.|.||++||++||+|+
T Consensus 33 a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~ 112 (193)
T 2f4z_A 33 EQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPKMK 112 (193)
T ss_dssp HHHHHHHHHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEE
T ss_pred HHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCCeEE
Confidence 678999999987 33 69999999999999999999999999999999999999999999999999
Q ss_pred EecccccceeeCCCCeeEccCCCCCCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHc
Q 030092 68 FVNKIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKEYREKYA 147 (183)
Q Consensus 68 f~t~i~HPnV~~~~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~r~~~~~~a 147 (183)
|+|+||||||+..+|.||+++|.++|+|+++|.+||++ |++||.+|++++|+|.+||++|++|+++|.++||+|+++||
T Consensus 113 F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~ti~~vL~s-I~sll~~pnp~~P~n~~aa~l~~~d~~~f~~~ar~~t~~ya 191 (193)
T 2f4z_A 113 FVTKIWHPNISSQTGAICLDILKHEWSPALTIRTALLS-IQAMLADPVPTDPQDAEVAKMMIENHPLFVQTAKLWTETFA 191 (193)
T ss_dssp ESSCCCBTTBCTTTCBBCCGGGTTTCCTTSCHHHHHHH-HHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred EecCCccCCCcCCCCEEECccccccCCCCCCHHHHHHH-HHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHc
Confidence 99999999999668999999999999999999999998 99999999999999999999999999999999999999999
Q ss_pred c
Q 030092 148 K 148 (183)
Q Consensus 148 ~ 148 (183)
+
T Consensus 192 ~ 192 (193)
T 2f4z_A 192 K 192 (193)
T ss_dssp C
T ss_pred c
Confidence 6
No 22
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=1.2e-47 Score=304.88 Aligned_cols=143 Identities=31% Similarity=0.629 Sum_probs=138.8
Q ss_pred HHHHHHHHHHhc---CCCCcEEEeecCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecccccceeeCC
Q 030092 4 PSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEM 80 (183)
Q Consensus 4 ~~kRl~kEl~~l---~~~gi~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~~ 80 (183)
+.+||++||+.+ ++.|+++.+.++|+++|+++|.||.+|||+||+|+|.|.||++||++||+|+|+|+||||||+.
T Consensus 49 a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~- 127 (194)
T 3bzh_A 49 SAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINS- 127 (194)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCT-
T ss_pred HHHHHHHHHHHHHhCCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceECC-
Confidence 689999999987 6789999999999999999999999999999999999999999999999999999999999995
Q ss_pred CCeeEccCCCCCCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcc
Q 030092 81 SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKEYREKYAK 148 (183)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~r~~~~~~a~ 148 (183)
+|.||+++|.++|+|+++|.+||++ |+.||.+|++++|+|.+|+++|++|+++|.++||+|+++||+
T Consensus 128 ~G~ICL~iL~~~WsP~~ti~~vL~s-I~~ll~~pnp~~Pln~~aa~l~~~d~~~f~~~ar~~t~~ya~ 194 (194)
T 3bzh_A 128 QGVICLDILKDNWSPALTISKVLLS-ICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT 194 (194)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHH-HHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCceechhhhccCCCcCcHHHHHHH-HHHHHhCCCCccchhHHHHHHHHHCHHHHHHHHHHHHHHhhC
Confidence 8999999999999999999999988 999999999999999999999999999999999999999985
No 23
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=2e-47 Score=296.22 Aligned_cols=143 Identities=24% Similarity=0.535 Sum_probs=137.4
Q ss_pred HHHHHHHHHHhc---CCCCcEEEeecC-----CcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecccccc
Q 030092 4 PSKRREMDLMKL---MMSDYKVEMIND-----GIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHP 75 (183)
Q Consensus 4 ~~kRl~kEl~~l---~~~gi~v~~~~~-----~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 75 (183)
|.+||+||++++ ++.|+++.+.++ |+++|+++|.||++|||+||+|+|.|.||++||++||+|+|.|+||||
T Consensus 11 ~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i~HP 90 (163)
T 3rcz_B 11 CKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHP 90 (163)
T ss_dssp HHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCST
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCCccC
Confidence 789999999987 788999999876 899999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCeeEccCCCC--CCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcc
Q 030092 76 NIDEMSGSVCLDVINQ--TWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKEYREKYAK 148 (183)
Q Consensus 76 nV~~~~G~icl~~l~~--~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~r~~~~~~a~ 148 (183)
||+ .+|.||+++|.. +|+|+++|.+||++ |++||.+|++++|+|.+||++|++|+++|.++||+|+++||.
T Consensus 91 nV~-~~G~iCl~iL~~~~~W~p~~ti~~vL~~-i~~ll~~P~~~~p~n~~aa~~~~~d~~~y~~~~r~~~~~ya~ 163 (163)
T 3rcz_B 91 NVY-PSGTVCLSILNEEEGWKPAITIKQILLG-IQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQARENAP 163 (163)
T ss_dssp TBC-TTSBBCCGGGCTTTTCCTTCCHHHHHHH-HHHHHTSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC
T ss_pred CCC-CCCcEeccccCCCCCcCCcCcHHHHHHH-HHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhCc
Confidence 999 599999999986 49999999999998 999999999999999999999999999999999999999984
No 24
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=1.7e-47 Score=296.11 Aligned_cols=147 Identities=25% Similarity=0.525 Sum_probs=139.1
Q ss_pred CCC-HHHHHHHHHHhc---CCCCcEEEeec-----CCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecc
Q 030092 1 MSS-PSKRREMDLMKL---MMSDYKVEMIN-----DGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNK 71 (183)
Q Consensus 1 Mss-~~kRl~kEl~~l---~~~gi~v~~~~-----~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~ 71 (183)
|++ +.+||++|++.+ ++.|+.+.+.. +|+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|+
T Consensus 4 M~~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 83 (161)
T 2grr_A 4 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPP 83 (161)
T ss_dssp CCHHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEecC
Confidence 776 789999999987 77899998874 589999999999999999999999999999999999999999999
Q ss_pred cccceeeCCCCeeEccCCCC--CCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHccc
Q 030092 72 IYHPNIDEMSGSVCLDVINQ--TWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKEYREKYAKA 149 (183)
Q Consensus 72 i~HPnV~~~~G~icl~~l~~--~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~r~~~~~~a~~ 149 (183)
||||||+ .+|.||+++|.. +|+|+++|.+||.+ |++||.+|++++|+|.+|+++|++|+++|.++||+||++||.+
T Consensus 84 i~HPnv~-~~G~iCl~iL~~~~~W~p~~~i~~vl~~-i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~~ 161 (161)
T 2grr_A 84 LFHPNVY-PSGTVCLSILEEDKDWRPAITIKQILLG-IQELLNEPNIQSPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS 161 (161)
T ss_dssp CCSTTBC-TTSBBCCGGGCTTTTCCTTCCHHHHHHH-HHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC-
T ss_pred cccCCCC-CCCeEeehhcCCCCCcCCCCcHHHHHHH-HHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHhcC
Confidence 9999999 599999999986 89999999999998 9999999999999999999999999999999999999999974
No 25
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=2.3e-47 Score=313.95 Aligned_cols=150 Identities=27% Similarity=0.656 Sum_probs=143.4
Q ss_pred CCC-HHHHHHHHHHhc------CCCCcEEEeecCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecccc
Q 030092 1 MSS-PSKRREMDLMKL------MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIY 73 (183)
Q Consensus 1 Mss-~~kRl~kEl~~l------~~~gi~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 73 (183)
|++ +.+||++||+.+ ++.||++.+.++|+++|+++|.||++|||+||+|+|.|.||++||++||+|+|.|+||
T Consensus 54 Ms~~a~~RL~kEl~~l~~~~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~ 133 (253)
T 3e46_A 54 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 133 (253)
T ss_dssp CCHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCc
Confidence 565 789999999987 3579999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeCCCCeeEccCCCCCCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHccccc
Q 030092 74 HPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKEYREKYAKAED 151 (183)
Q Consensus 74 HPnV~~~~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~r~~~~~~a~~~~ 151 (183)
||||+..+|.||+++|.++|+|+++|.+||++ |++||.+|++++|+|.+||++|++|+++|.++||+|+++||+.+.
T Consensus 134 HPNV~~~~G~ICL~iL~~~WsP~~ti~~vL~s-I~~ll~~pnp~~Pln~eaa~l~~~d~~~f~~~ar~~t~~yA~~~~ 210 (253)
T 3e46_A 134 HPNISSVTGAICLDILKDQWAAAMTLRTVLLS-LQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGAPV 210 (253)
T ss_dssp BTTBCTTTCBBCCGGGTTCCCTTCCHHHHHHH-HHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCCSC
T ss_pred cCCccCCCCeeecccccCCCCCCCCHHHHHHH-HHHHhcCCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHhccccc
Confidence 99999669999999999999999999999988 999999999999999999999999999999999999999999754
No 26
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.9e-48 Score=304.10 Aligned_cols=149 Identities=58% Similarity=1.125 Sum_probs=141.7
Q ss_pred HHHHHHHHHHhcCCCCcEEEeecCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecccccceeeCCCCe
Q 030092 4 PSKRREMDLMKLMMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEMSGS 83 (183)
Q Consensus 4 ~~kRl~kEl~~l~~~gi~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~~~G~ 83 (183)
+.+||++||+++.++|+++.+. +|+++|+++|.||++|||+||+|+|.|.||++||++||+|+|+|+||||||+..+|.
T Consensus 26 a~~RL~kEl~~l~~~g~~v~~~-ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV~~~~G~ 104 (179)
T 2z5d_A 26 GKRRMDTDVIKLIESKHEVTIL-GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGT 104 (179)
T ss_dssp HHHHHHHHHHHHHHSSSCEEEE-EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCB
T ss_pred HHHHHHHHHHhcCcCCCEEEEC-CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCcCCCCCCe
Confidence 6899999999997789999987 578999999999999999999999999999999999999999999999999966999
Q ss_pred eEccCCCCCCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHccccccc
Q 030092 84 VCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKEYREKYAKAEDIE 153 (183)
Q Consensus 84 icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~r~~~~~~a~~~~~~ 153 (183)
||+++|.++|+|+++|.+||+++|++||.+|++++|+|.+||++|++|+++|.++||+|+++||+.....
T Consensus 105 ICL~iL~~~WsP~~ti~~iL~s~I~~Ll~~Pn~~~p~n~eaa~~~~~d~~~y~~~vr~~~~~~a~~~~~~ 174 (179)
T 2z5d_A 105 VCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYATEEALK 174 (179)
T ss_dssp BCHHHHHHHCCTTCCTTHHHHTHHHHHHHSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSSHHHHC
T ss_pred EeccccccCCCCCCCHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHcccchhh
Confidence 9999999999999999999987799999999999999999999999999999999999999999976544
No 27
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.5e-47 Score=299.63 Aligned_cols=144 Identities=27% Similarity=0.553 Sum_probs=138.2
Q ss_pred HHHHHHHHHHhc---CCCCcEEEeecCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecccccceeeCC
Q 030092 4 PSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEM 80 (183)
Q Consensus 4 ~~kRl~kEl~~l---~~~gi~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~~ 80 (183)
+.+||++||+.+ ++.||++.+.++|+++|+++|.||++|||+||+|+|.|.||++||++||+|+|+|+||||||+.
T Consensus 31 ~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~- 109 (179)
T 1i7k_A 31 VGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDT- 109 (179)
T ss_dssp HHHHHHHHHHHHHHHCCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTTBCT-
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCcccc-
Confidence 789999999987 7889999999999999999999999999999999999999999999999999999999999996
Q ss_pred CCeeEccCCCCCCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcccc
Q 030092 81 SGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKEYREKYAKAE 150 (183)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~r~~~~~~a~~~ 150 (183)
+|.||+++|.+.|+|+++|.+||++ |++||.+|++++|+|.+||++| +|+++|.++|+++++++++.+
T Consensus 110 ~G~ICL~iL~~~WsP~~ti~~vL~s-I~sll~~Pn~~~Pln~~aa~l~-~d~~~f~~~v~~~v~~~~~~~ 177 (179)
T 1i7k_A 110 QGNISLDILKEKWSALYDVRTILLS-IQSLLGEPNIDSPLNTHAAELW-KNPTAFKKYLQETYSKQVTSQ 177 (179)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHH-HHHHHHSCCTTSCSCHHHHHHT-TSHHHHHHHHHHHHHTTCC--
T ss_pred CCeEEcccCcCcCCCCCCHHHHHHH-HHHHHhCCCCcchhhHHHHHHh-hCHHHHHHHHHHHHHHHhccc
Confidence 8999999999999999999999988 9999999999999999999999 999999999999999999865
No 28
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=2e-47 Score=307.88 Aligned_cols=150 Identities=32% Similarity=0.687 Sum_probs=141.8
Q ss_pred CCHHHHHHHHHHhc---CCCCcEEEeecCC-cceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeccccccee
Q 030092 2 SSPSKRREMDLMKL---MMSDYKVEMINDG-IQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNI 77 (183)
Q Consensus 2 ss~~kRl~kEl~~l---~~~gi~v~~~~~~-~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV 77 (183)
|++.+||++|++.+ +++|+++.+.+++ +++|+++|.||++|||+||+|++.|.||++||++||+|+|.|+||||||
T Consensus 1 s~a~~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI 80 (215)
T 1tte_A 1 SSRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNI 80 (215)
T ss_dssp CTTHHHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSS
T ss_pred ChHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcC
Confidence 45789999999886 7789999998764 6799999999999999999999999999999999999999999999999
Q ss_pred eCCCCeeEccCCCCCCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcccccc
Q 030092 78 DEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKEYREKYAKAEDI 152 (183)
Q Consensus 78 ~~~~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~r~~~~~~a~~~~~ 152 (183)
+..+|.||+++|+++|+|++||.+||.+ |++||.+|++++|+|.+||++|++|++.|.++||+|+++||+.+..
T Consensus 81 ~~~~G~ICL~iL~~~WsP~~ti~~VL~s-I~sLL~~Pnp~~Pln~eaa~~~~~d~~~f~~~ar~~t~~yA~~~~~ 154 (215)
T 1tte_A 81 SSVTGAICLDILRNAWSPVITLKSALIS-LQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYASETSN 154 (215)
T ss_dssp CSSSSCCCSSTTTCCSCTTCCHHHHHHH-HHHHHTSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHSSCCCSC
T ss_pred cCCCCEEECccCCCCCCCcCcHHHHHHH-HHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhccCCCc
Confidence 9659999999999999999999999998 9999999999999999999999999999999999999999997654
No 29
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=9.2e-47 Score=290.28 Aligned_cols=144 Identities=29% Similarity=0.592 Sum_probs=138.5
Q ss_pred HHHHHHHHHHhc---CCCCcEE-EeecCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecccccceeeC
Q 030092 4 PSKRREMDLMKL---MMSDYKV-EMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDE 79 (183)
Q Consensus 4 ~~kRl~kEl~~l---~~~gi~v-~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~ 79 (183)
+.+||++|++.+ ++.|+++ .+.++|+++|+++|. |++|||+||+|+|.|.||++||++||+|+|+|++|||||+.
T Consensus 5 ~~~RL~kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~ 83 (155)
T 1wzv_A 5 ASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVDE 83 (155)
T ss_dssp CHHHHHHHHHHHHHSCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcCCC
Confidence 689999999987 6789999 788899999999999 99999999999999999999999999999999999999996
Q ss_pred CCCeeEccCC-CCCCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcccc
Q 030092 80 MSGSVCLDVI-NQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKEYREKYAKAE 150 (183)
Q Consensus 80 ~~G~icl~~l-~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~r~~~~~~a~~~ 150 (183)
+|.||+++| .++|+|+++|.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|+++||+.+
T Consensus 84 -~G~iCl~iL~~~~W~p~~~i~~vl~~-i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~~ 153 (155)
T 1wzv_A 84 -NGQICLPIISSENWKPCTKTCQVLEA-LNVLVNRPNIREPLRMDLADLLTQNPELFRKNAEEFTLRFGVDR 153 (155)
T ss_dssp -TCBCCCGGGCTTTCCTTCCHHHHHHH-HHHHHHSCCSSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCEEC
T ss_pred -CCeEeecCCCccCCCCCCcHHHHHHH-HHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 999999999 8999999999999988 99999999999999999999999999999999999999999865
No 30
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=4.1e-46 Score=289.83 Aligned_cols=143 Identities=31% Similarity=0.582 Sum_probs=135.1
Q ss_pred CHHHHHHHHHHhc---CCCCcEEEee-cCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecccccceee
Q 030092 3 SPSKRREMDLMKL---MMSDYKVEMI-NDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNID 78 (183)
Q Consensus 3 s~~kRl~kEl~~l---~~~gi~v~~~-~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~ 78 (183)
.+.+||++||+.+ ++.|+++.+. +++++.|+++| ||++|||+||+|++.|.||++||++||+|+|+|+||||||+
T Consensus 14 ~~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~ 92 (167)
T 3fn1_B 14 VRDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNIT 92 (167)
T ss_dssp HHHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCCSSBC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCcccCCCC
Confidence 3789999999987 6789999865 57899999999 89999999999999999999999999999999999999999
Q ss_pred CCCCeeEccCCCC------CCCCccchHhHHHHHHHHhhcC-CCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcc
Q 030092 79 EMSGSVCLDVINQ------TWSPMFDLVNVFEVFLPQLLLY-PNPSDPLNGEAAALLMRDRAAYEQRVKEYREKYAK 148 (183)
Q Consensus 79 ~~~G~icl~~l~~------~W~p~~~i~~il~~~i~~ll~~-p~~~~p~n~ea~~~~~~~~~~f~~~~r~~~~~~a~ 148 (183)
.+|.||+++|.. +|+|+++|.+||.+ |++||.+ |++++|+|.+||++|++|+++|.++||+|+++||+
T Consensus 93 -~~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~-i~~ll~~~pn~~~p~n~eaa~~~~~~~~~f~~~~r~~~~~~A~ 167 (167)
T 3fn1_B 93 -ETGEICLSLLREHSIDGTGWAPTRTLKDVVWG-LNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVDDYIKRYAR 167 (167)
T ss_dssp -TTCCBCCGGGSBCSSSTTSBCTTCCHHHHHHH-HHHTTTTTCCSSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred -CCCEEechhhccCCCCCCCCCCcCcHHHHHHH-HHHHHcCCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 599999999975 79999999999988 9999999 69999999999999999999999999999999985
No 31
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.6e-46 Score=292.72 Aligned_cols=143 Identities=23% Similarity=0.501 Sum_probs=135.4
Q ss_pred CCC-HHHHHHHHHHhc---CCCCcEEEeecCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecccccce
Q 030092 1 MSS-PSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPN 76 (183)
Q Consensus 1 Mss-~~kRl~kEl~~l---~~~gi~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 76 (183)
|++ +.+||++|++.| ++.|+++.+.++|+++|.++|.||++|||+||+|+|.|.||++||++||+|+|+|+|||||
T Consensus 20 M~~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPN 99 (169)
T 1yrv_A 20 MHGRAYLLLHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPN 99 (169)
T ss_dssp GGCHHHHHHHHHHHHHHHHCCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCCTT
T ss_pred cChHHHHHHHHHHHHHHhCCCCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCccCc
Confidence 776 789999999987 7789999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCCeeEccCCC--CCCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHH
Q 030092 77 IDEMSGSVCLDVIN--QTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKEYREK 145 (183)
Q Consensus 77 V~~~~G~icl~~l~--~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~r~~~~~ 145 (183)
|+..+|.||+++|. ++|+|+++|.+||.+ |++||.+|++++|+|.+||++|++|+++|.++ |+++++
T Consensus 100 I~~~~G~ICL~iL~~~~~WsP~~ti~~vL~s-I~sll~~Pn~~~Pln~eaa~l~~~d~~~y~~~-~~~v~~ 168 (169)
T 1yrv_A 100 VDPHTGQPCIDFLDNPEKWNTNYTLSSILLA-LQVMLSNPVLENPVNLEAARILVKDESLYRTI-LRLFNR 168 (169)
T ss_dssp BCTTTCCBCCHHHHCGGGCCTTCCHHHHHHH-HHHHHTSCCTTSCSCHHHHHHHHSCHHHHHHH-HHHHC-
T ss_pred ccCCCCeEeehhhcCCcCCCCcCCHHHHHHH-HHHHHhCCCCCCchhHHHHHHHHHCHHHHHHH-HHHhhC
Confidence 94469999999998 899999999999998 99999999999999999999999999999999 888754
No 32
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=6.1e-46 Score=292.82 Aligned_cols=147 Identities=26% Similarity=0.550 Sum_probs=136.8
Q ss_pred CCC--HHHHHHHHHHhc---CCCCcEEE-eecCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeccccc
Q 030092 1 MSS--PSKRREMDLMKL---MMSDYKVE-MINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYH 74 (183)
Q Consensus 1 Mss--~~kRl~kEl~~l---~~~gi~v~-~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~H 74 (183)
|++ +.|||++||+.+ ++.|+++. +.++|+++|+++|.||++|||+||+|++.|.||++||++||+|+|+|++||
T Consensus 3 m~~~~a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 82 (183)
T 3rz3_A 3 MGSPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWH 82 (183)
T ss_dssp --CCHHHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCC
T ss_pred CcchHHHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCcc
Confidence 554 899999999987 77899999 567799999999999999999999999999999999999999999999999
Q ss_pred ceeeCCCCeeEccCCC-------------CCCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHh------CHHHH
Q 030092 75 PNIDEMSGSVCLDVIN-------------QTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMR------DRAAY 135 (183)
Q Consensus 75 PnV~~~~G~icl~~l~-------------~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~------~~~~f 135 (183)
|||+. +|.||+++|. ++|+|+++|.+||++ |++||.+|++++|+|.+|+.+|++ ++++|
T Consensus 83 PnV~~-~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~s-i~~ll~~Pn~~~p~n~~aa~~~~~~~~~~~~~~~y 160 (183)
T 3rz3_A 83 PNIYE-TGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLS-VISLLNEPNTFSPANVDASVMYRKWKESKGKDREY 160 (183)
T ss_dssp TTBCT-TSBBCCTTC--------------CCCCTTCCHHHHHHH-HHHHHHSCCCSSCSSHHHHHHHHHHHHTTTCCCHH
T ss_pred CCCCC-CCcEehhhcCcccccccccccccCCCCCcCcHHHHHHH-HHHHHhCCCCCCcccHHHHHHHHhcccccccHHHH
Confidence 99995 9999999997 889999999999999 999999999999999999999998 78999
Q ss_pred HHHHHHHHHHHccc
Q 030092 136 EQRVKEYREKYAKA 149 (183)
Q Consensus 136 ~~~~r~~~~~~a~~ 149 (183)
.++||++++++...
T Consensus 161 ~~~v~~~v~~s~~~ 174 (183)
T 3rz3_A 161 TDIIRKQVLGTKVD 174 (183)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998764
No 33
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=9.7e-46 Score=289.08 Aligned_cols=147 Identities=24% Similarity=0.518 Sum_probs=135.9
Q ss_pred CCC-HHHHHHHHHHhcC-----------CC---CcEEEe-ecCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCC
Q 030092 1 MSS-PSKRREMDLMKLM-----------MS---DYKVEM-INDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSP 64 (183)
Q Consensus 1 Mss-~~kRl~kEl~~l~-----------~~---gi~v~~-~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP 64 (183)
||+ +.+||++||+.+. +. ++.+.+ .++|+++|+++|.||++|||+||+|+|.|.||++||++||
T Consensus 3 Ms~~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP 82 (172)
T 2y9m_A 3 MADTCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPP 82 (172)
T ss_dssp -CHHHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCC
T ss_pred CcHHHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCC
Confidence 776 8899999998751 22 356677 7789999999999999999999999999999999999999
Q ss_pred ceeEec-ccccceeeCCCCeeEccCCC-CCCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHh-CHHHHHHHHHH
Q 030092 65 SIGFVN-KIYHPNIDEMSGSVCLDVIN-QTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMR-DRAAYEQRVKE 141 (183)
Q Consensus 65 ~v~f~t-~i~HPnV~~~~G~icl~~l~-~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~-~~~~f~~~~r~ 141 (183)
+|+|.| +||||||+..+|.||+++|. ++|+|+++|.+||.+ |++||.+|++++|+|.+||++|++ |+++|.++||+
T Consensus 83 ~v~f~t~~i~HPni~~~~G~iCl~iL~~~~W~p~~~i~~vL~s-i~~ll~~p~~~~p~n~~aa~~~~~~d~~~f~~~~~~ 161 (172)
T 2y9m_A 83 KISFMQNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCVHA-VWRLLREPVCDSPLDVDIGNIIRCGDMSAYQGIVKY 161 (172)
T ss_dssp EEEECTTSCCCTTEETTTTEECCGGGSTTTCCTTCCHHHHHHH-HHHHHHSCCTTSCSSHHHHHHHTTTCHHHHHHHHHH
T ss_pred EEEEeeCCeecCCCcCCCCEEeccccCCCCCCCcCcHHHHHHH-HHHHHhCCCCCCccCHHHHHHHHhCCHHHHHHHHHH
Confidence 999999 99999997569999999998 899999999999988 999999999999999999999999 99999999999
Q ss_pred HHHHHcc
Q 030092 142 YREKYAK 148 (183)
Q Consensus 142 ~~~~~a~ 148 (183)
|+++++.
T Consensus 162 ~~~~~~~ 168 (172)
T 2y9m_A 162 FLAERER 168 (172)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9999875
No 34
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=1.5e-46 Score=293.38 Aligned_cols=150 Identities=55% Similarity=0.987 Sum_probs=137.9
Q ss_pred HHHHHHHHHHhcCCCCcEEEeecCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecccccceeeCCCCe
Q 030092 4 PSKRREMDLMKLMMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEMSGS 83 (183)
Q Consensus 4 ~~kRl~kEl~~l~~~gi~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~~~G~ 83 (183)
+.+||++|++++....+.| +.++|+++|+++|.||++|||+||+|+|.|.||++||++||+|+|.|+||||||+..+|.
T Consensus 13 ~~~RL~~El~~l~~~~~~v-~~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~~~G~ 91 (171)
T 1yf9_A 13 SNRRREMDYMRLCNSTRKV-YPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDERSGS 91 (171)
T ss_dssp CCHHHHHHHHHHHSSSSCE-EECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCB
T ss_pred HHHHHHHHHHHHHhCCCCC-CCCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCcccCCe
Confidence 5799999999984333445 457899999999999999999999999999999999999999999999999999966999
Q ss_pred eEccCCCCCCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHcccccccc
Q 030092 84 VCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKEYREKYAKAEDIEA 154 (183)
Q Consensus 84 icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~r~~~~~~a~~~~~~~ 154 (183)
||+++|.++|+|+++|.+||+++|++||.+|++++|+|.+||++|++|+++|.++||+|+++||+......
T Consensus 92 iCl~iL~~~W~p~~~i~~vL~sil~~ll~~Pn~~~p~n~~aa~~~~~d~~~y~~~vr~~~~~~a~~~~~~~ 162 (171)
T 1yf9_A 92 VCLDVINQTWTPMYQLENIFDVFLPQLLRYPNPSDPLNVQAAHLLHADRVGFDALLREHVSTHATPQKALE 162 (171)
T ss_dssp BCHHHHHHHCCTTCCTHHHHHTHHHHHHHSCCSSCCSCHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred EeccccccCCCCCCcHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcChhhHhc
Confidence 99999999999999999999984489999999999999999999999999999999999999999766543
No 35
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.4e-45 Score=285.14 Aligned_cols=143 Identities=30% Similarity=0.566 Sum_probs=135.5
Q ss_pred CCCHHHHHHHHHHhc-CCCCcEEE-eecCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecccccceee
Q 030092 1 MSSPSKRREMDLMKL-MMSDYKVE-MINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNID 78 (183)
Q Consensus 1 Mss~~kRl~kEl~~l-~~~gi~v~-~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~ 78 (183)
|+.+.+||++|++++ +++|+++. +.++|+++|+++| ||++|||+||+|++.|.||++||++||+|+|.|+||||||+
T Consensus 4 ~~~~~~RL~kEl~~l~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 82 (160)
T 1y8x_A 4 ASAAQLRIQKDINELNLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNID 82 (160)
T ss_dssp CCHHHHHHHHHHHTCCCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBC
T ss_pred ccHHHHHHHHHHHhcCCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCcCC
Confidence 455899999999998 66799998 7788999999998 99999999999999999999999999999999999999999
Q ss_pred CCCCeeEccCCCCCCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHH
Q 030092 79 EMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKEYREKY 146 (183)
Q Consensus 79 ~~~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~r~~~~~~ 146 (183)
. +|.||+++|.++|+|+++|.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||++++..
T Consensus 83 ~-~G~iCl~iL~~~W~p~~~i~~vL~~-i~~ll~~Pn~~~p~n~~aa~~~~~~~~~f~~~v~~~v~~~ 148 (160)
T 1y8x_A 83 L-EGNVCLNILREDWKPVLTINSIIYG-LQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGG 148 (160)
T ss_dssp T-TCBBCCGGGTTTCCTTCCHHHHHHH-HHHHHHSCCCSSCSCHHHHHHHHSCHHHHHHHHHHHHHSE
T ss_pred C-CCeEEcccchhhccCCCCHHHHHHH-HHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhhC
Confidence 5 8999999999999999999999998 9999999999999999999999999999999999998743
No 36
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=1.1e-45 Score=283.99 Aligned_cols=145 Identities=32% Similarity=0.646 Sum_probs=132.2
Q ss_pred HHHHHHHHHHhc---CCCCcEEEe-ecCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecccccceeeC
Q 030092 4 PSKRREMDLMKL---MMSDYKVEM-INDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDE 79 (183)
Q Consensus 4 ~~kRl~kEl~~l---~~~gi~v~~-~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~ 79 (183)
+.+||++|++.+ ++.|+.+.+ .++|+++|+++|. |++|||+||+|+|.|.||++||++||+|+|.|+||||||+.
T Consensus 3 a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 81 (154)
T 1c4z_D 3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDE 81 (154)
T ss_dssp -CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCCC
Confidence 579999999988 567888654 5679999999998 99999999999999999999999999999999999999995
Q ss_pred CCCeeEccCCC-CCCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHccccc
Q 030092 80 MSGSVCLDVIN-QTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKEYREKYAKAED 151 (183)
Q Consensus 80 ~~G~icl~~l~-~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~r~~~~~~a~~~~ 151 (183)
+|.||+++|. ++|+|+++|.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|+++||+...
T Consensus 82 -~G~iCl~iL~~~~W~p~~~i~~vl~~-i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~~~ 152 (154)
T 1c4z_D 82 -KGQVCLPVISAENWKPATKTDQVIQS-LIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGEKRP 152 (154)
T ss_dssp -TCBBCCTTTSSSSCCTTCCHHHHHHH-HHHHHHSCCCSSCSCHHHHHHHHTCSSTTHHHHHHHHTTC-----
T ss_pred -CCEEECCCCCCCCCCCCCcHHHHHHH-HHHHHcCCCCCchhhHHHHHHHHHhHHHHHHHHHHHHHHhcccCC
Confidence 9999999996 899999999999988 999999999999999999999999999999999999999998653
No 37
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1e-44 Score=285.10 Aligned_cols=140 Identities=29% Similarity=0.546 Sum_probs=134.2
Q ss_pred HHHHHHHHHHhc-CCCCcEEE-eecCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecccccceeeCCC
Q 030092 4 PSKRREMDLMKL-MMSDYKVE-MINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEMS 81 (183)
Q Consensus 4 ~~kRl~kEl~~l-~~~gi~v~-~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~~~ 81 (183)
+.+||++||+++ +++|+++. +.++|+++|+++| ||++|||+||+|++.|.||++||++||+|+|.|+||||||+. +
T Consensus 27 ~~~RL~kEl~~l~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNV~~-~ 104 (180)
T 2nvu_C 27 AQLRIQKDINELNLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDL-E 104 (180)
T ss_dssp HHHHHHHHHHTCCCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCT-T
T ss_pred HHHHHHHHHHhcCCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccCCCCC-C
Confidence 789999999998 66799998 7788999999998 999999999999999999999999999999999999999995 8
Q ss_pred CeeEccCCCCCCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHH
Q 030092 82 GSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKEYREKY 146 (183)
Q Consensus 82 G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~r~~~~~~ 146 (183)
|.||+++|.++|+|+++|.+||.+ |++||.+|++++|+|.+||.+|++|+++|.++||++++..
T Consensus 105 G~iCl~iL~~~W~p~~~i~~vL~s-i~~ll~~Pn~~~p~n~~aa~~~~~d~~~f~~~v~~~v~~~ 168 (180)
T 2nvu_C 105 GNVALNILREDWKPVLTINSIIYG-LQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGG 168 (180)
T ss_dssp SBBCCGGGTTSCCTTCCHHHHHHH-HHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHSE
T ss_pred CcEEcccccccCCCCCCHHHHHHH-HHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhhC
Confidence 999999999999999999999998 9999999999999999999999999999999999998754
No 38
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=4.3e-45 Score=285.43 Aligned_cols=137 Identities=26% Similarity=0.621 Sum_probs=103.9
Q ss_pred HHHHHHHHHHhc---CCCCcEEEeec-CCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecccccceeeC
Q 030092 4 PSKRREMDLMKL---MMSDYKVEMIN-DGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDE 79 (183)
Q Consensus 4 ~~kRl~kEl~~l---~~~gi~v~~~~-~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~ 79 (183)
+.+||+|||++| ++.|+++.+.+ +|+++|+++|.||++|||+||+|+|.|.||++||++||+|+|+|+||||||+.
T Consensus 18 ~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HPNV~~ 97 (172)
T 2awf_A 18 GSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDK 97 (172)
T ss_dssp THHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccCCCCC
Confidence 789999999987 78899999876 69999999999999999999999999999999999999999999999999995
Q ss_pred CCCeeEccCCC-------------CCCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHH-HHHHHHHHH
Q 030092 80 MSGSVCLDVIN-------------QTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRA-AYEQRVKEY 142 (183)
Q Consensus 80 ~~G~icl~~l~-------------~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~~~~-~f~~~~r~~ 142 (183)
+|.||+++|. ++|+|+++|.+||++ |++||.+|++++|+|.+||++|++|++ +|.++||+|
T Consensus 98 -~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~s-I~sll~~Pn~~~p~n~~aa~~~~~d~~~~f~~~vr~~ 172 (172)
T 2awf_A 98 -NGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMIS-VISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARC 172 (172)
T ss_dssp -TCBBCCGGGSCC---------CTTSCCTTCCHHHHHHH-HHHHHSCC-----------------------------
T ss_pred -CCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHH-HHHHHHCcCCCCccCHHHHHHHHHCcHHHHHHHHHhC
Confidence 8999999996 689999999999998 999999999999999999999999999 999999975
No 39
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=7.4e-44 Score=310.39 Aligned_cols=147 Identities=35% Similarity=0.697 Sum_probs=141.9
Q ss_pred CHHHHHHHHHHhc---CCCCcEEEeecCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecccccceeeC
Q 030092 3 SPSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDE 79 (183)
Q Consensus 3 s~~kRl~kEl~~l---~~~gi~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~ 79 (183)
.|.|||++|++.+ +++|+++.|.++|+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|+||||||+.
T Consensus 3 ~a~~RL~kEl~~l~~~~~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 82 (399)
T 4ddg_A 3 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 82 (399)
T ss_dssp HHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccccCC
Confidence 3789999999987 7889999999999999999999999999999999999999999999999999999999999995
Q ss_pred CCCeeEccCCCCCCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHccccc
Q 030092 80 MSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKEYREKYAKAED 151 (183)
Q Consensus 80 ~~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~r~~~~~~a~~~~ 151 (183)
+|.||+++|.++|+|+++|.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+||++||+...
T Consensus 83 -~G~iCl~il~~~W~p~~~i~~vL~~-i~~ll~~pnp~~p~n~~aa~~~~~d~~~y~~~~~~~~~~~a~~~v 152 (399)
T 4ddg_A 83 -NGSISLDILRSQWSPALTISKVLLS-ICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAMGGS 152 (399)
T ss_dssp -TCBBCCGGGTTSCCTTCCHHHHHHH-HHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHTSCTT
T ss_pred -CCeEeCcccccCCCccccHHHHHHH-HHHHHcCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhhcccc
Confidence 9999999999999999999999998 999999999999999999999999999999999999999998753
No 40
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=6.6e-44 Score=282.65 Aligned_cols=143 Identities=31% Similarity=0.548 Sum_probs=135.1
Q ss_pred CCHHHHHHHHHHhc-CCCCcEEE----eecCCcc---eEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecccc
Q 030092 2 SSPSKRREMDLMKL-MMSDYKVE----MINDGIQ---EFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIY 73 (183)
Q Consensus 2 ss~~kRl~kEl~~l-~~~gi~v~----~~~~~~~---~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 73 (183)
+++.+||++||+.+ +++|+++. +.++|++ +|+++|. |++|||+||+|++.|.||++||++||+|+|.|+||
T Consensus 28 s~a~~RL~kEl~~l~~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 106 (190)
T 3o2u_A 28 SAARIRLKRDLDSLDLPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKKIF 106 (190)
T ss_dssp CHHHHHHHHHHHTCCCCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEECSCCC
T ss_pred cHHHHHHHHHHHhccCCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEEecCcc
Confidence 34899999999998 66799998 7888999 9999996 88899999999999999999999999999999999
Q ss_pred cceeeCCCCeeEccCCCCCCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHc
Q 030092 74 HPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKEYREKYA 147 (183)
Q Consensus 74 HPnV~~~~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~r~~~~~~a 147 (183)
||||+. +|.||+++|.++|+|+++|.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|++.+.
T Consensus 107 HPnV~~-~G~iCl~iL~~~W~p~~~i~~vL~~-i~~ll~~pn~~~pln~~aa~~~~~d~~~f~~~ar~~~~~~~ 178 (190)
T 3o2u_A 107 HPNIDL-KGNVCLNILREDWSPALDLQSIITG-LLFLFLEPNPNDPLNKDAAKLLCEGEKEFAEAVRLTMSGGS 178 (190)
T ss_dssp CTTBCT-TSBBCCGGGTTTCCTTCCHHHHHHH-HHHHHHSCCTTSCSSHHHHHHHHTCHHHHHHHHHHHHBTCE
T ss_pred cCCCCC-CCeEechhccCCCCCCCCHHHHHHH-HHHHHhCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHhcC
Confidence 999995 9999999999999999999999998 99999999999999999999999999999999999996554
No 41
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=1.2e-43 Score=276.00 Aligned_cols=139 Identities=26% Similarity=0.484 Sum_probs=131.3
Q ss_pred CCC-HHHHHHHHHHhc---C------------CCCcEEEeecCCcceEEEEEeCCCCCCCC--CCEEEEEEEcCCCCCCC
Q 030092 1 MSS-PSKRREMDLMKL---M------------MSDYKVEMINDGIQEFYVHFQGPNESPYH--GGVWRIRVELPDAYPYK 62 (183)
Q Consensus 1 Mss-~~kRl~kEl~~l---~------------~~gi~v~~~~~~~~~w~~~i~Gp~~tpye--gg~f~~~i~fp~~YP~~ 62 (183)
||+ +.|||++|++.+ + +.++.+.+.++|+++|+++|.||++|||+ ||+|++.|.||++||++
T Consensus 5 Ms~~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~~ 84 (167)
T 4ds2_A 5 MKNISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPHE 84 (167)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTTS
T ss_pred ccHHHHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCCC
Confidence 777 889999999876 4 56899999999999999999999999999 99999999999999999
Q ss_pred CCceeEecccccceeeCCCCeeEccCCCCCCCCccchHhHHHHHHHHhhcC--CCCCCCccHHHHHHHHhCHHHHHHHHH
Q 030092 63 SPSIGFVNKIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLY--PNPSDPLNGEAAALLMRDRAAYEQRVK 140 (183)
Q Consensus 63 pP~v~f~t~i~HPnV~~~~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~--p~~~~p~n~ea~~~~~~~~~~f~~~~r 140 (183)
||+|+|.|+||||||+ .+|.||+++|.++|+|++++.++|+.+|+.|+.. |++++|+|.+||++|++|+++|.++||
T Consensus 85 pP~v~f~t~i~HPnv~-~~G~iCl~il~~~W~p~~~i~~vll~~l~~l~~~~~pn~~~p~n~eaa~l~~~d~~~f~~~vr 163 (167)
T 4ds2_A 85 PPTVRFVTPVYSPLVT-GEGGICDRMVNDFWTPDQHASDVIKLVLDRVFSQYKSRRDDDVNPEARHYLEKFPQDFAARVR 163 (167)
T ss_dssp CCEEEESSCCCCSSCC-TTSCCCTHHHHTTCCTTSCHHHHHHHHHHHHHTSTTSCCSCCCCHHHHHHHHHCHHHHHHHHT
T ss_pred CCEEEEeCCcccccCC-CCCEEEcccCcCCCCCCCChHHHHHHHHHHHHhcCCCCCcchHhHHHHHHHHHCHHHHHHHHh
Confidence 9999999999999999 5999999999999999999999877768888875 899999999999999999999999998
No 42
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=9.5e-41 Score=282.05 Aligned_cols=154 Identities=21% Similarity=0.442 Sum_probs=140.1
Q ss_pred HHHHHHHHHHhc---CCC----CcEEEeecCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecc-----
Q 030092 4 PSKRREMDLMKL---MMS----DYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNK----- 71 (183)
Q Consensus 4 ~~kRl~kEl~~l---~~~----gi~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~----- 71 (183)
+.+||++|++.+ ++. ++.+.+.++|++.|+++|.||.+|||+||+|+|.|.||++||++||+|+|.|+
T Consensus 77 ~~kRL~kEl~~L~k~~p~g~~~~i~v~~~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~g~~~ 156 (323)
T 3ceg_A 77 RARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGHSV 156 (323)
T ss_dssp HHHHHHHHHHHHHHHCCCCSSCCEEEEEESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCSTTTTC
T ss_pred HHHHHHHHHHHHHhCCCCCcccceeecccCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEeccCCCcc
Confidence 789999999987 444 45678889999999999999999999999999999999999999999999998
Q ss_pred cccceeeCCCCeeEccCCC-------CCCCCcc-chHhHHHHHHHHhhc--CCCCCCCccHHH--HHHHHhCHHHHHHHH
Q 030092 72 IYHPNIDEMSGSVCLDVIN-------QTWSPMF-DLVNVFEVFLPQLLL--YPNPSDPLNGEA--AALLMRDRAAYEQRV 139 (183)
Q Consensus 72 i~HPnV~~~~G~icl~~l~-------~~W~p~~-~i~~il~~~i~~ll~--~p~~~~p~n~ea--~~~~~~~~~~f~~~~ 139 (183)
||||||+ .+|.||+++|. ++|+|++ +|.+||++ |++||. +|++++|+|.++ +.+|.+|++.|.++|
T Consensus 157 ifHPNV~-~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLls-IqsLL~~~~Pn~~dP~~~~a~a~~~~~~d~~~Y~~~v 234 (323)
T 3ceg_A 157 RFNPNLY-NDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVS-VQSLILVAEPYFNEPGYERSRGTPSGTQSSREYDGNI 234 (323)
T ss_dssp CCBTTBC-TTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHH-HHHHTSCSSGGGGSTTGGGGTTSHHHHHHHHHHHHHH
T ss_pred cccCCCC-cCCeEechhhccccCCCcCCCCcCcCCHHHHHHH-HHHHHcCCCCCCCCccCHHHHHhhhhhhhHHHHHHHH
Confidence 9999999 59999999997 6899999 89999998 999996 777799999987 678999999999999
Q ss_pred HHHHHHHccccccccCCCCC
Q 030092 140 KEYREKYAKAEDIEAAPDEN 159 (183)
Q Consensus 140 r~~~~~~a~~~~~~~~~~~~ 159 (183)
|.|+++||+...++.++...
T Consensus 235 r~~t~k~A~~~~l~~Pp~~f 254 (323)
T 3ceg_A 235 RQATVKWAMLEQIRNPSPCF 254 (323)
T ss_dssp HHHHHHHTTHHHHHSCCTTT
T ss_pred HHHHHHHhhHHHHhCCCccc
Confidence 99999999988777766543
No 43
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=6.3e-40 Score=243.92 Aligned_cols=115 Identities=19% Similarity=0.470 Sum_probs=101.5
Q ss_pred CCCHHHHHHHHHHhc---CCCCcEEEeecCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeccc-ccce
Q 030092 1 MSSPSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKI-YHPN 76 (183)
Q Consensus 1 Mss~~kRl~kEl~~l---~~~gi~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i-~HPn 76 (183)
|+++.+||++|++++ ++.|+++.+.++|+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|++ ||||
T Consensus 4 m~~a~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPn 83 (125)
T 2fo3_A 4 MGNANYRIQKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTH 83 (125)
T ss_dssp -----CHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBTT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCCc
Confidence 778899999999987 678999999999999999999999999999999999999999999999999999997 9999
Q ss_pred eeCCCCeeEccCCCCCCCCccchHhHHHHHHHHhhcCCCCC
Q 030092 77 IDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPS 117 (183)
Q Consensus 77 V~~~~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~ 117 (183)
|+. +|.||+++|+++|+|+++|.+||.+ |++||.+|+..
T Consensus 84 v~~-~G~iCl~iL~~~W~P~~~i~~vl~s-i~~ll~~p~~~ 122 (125)
T 2fo3_A 84 VYS-NGDICLSLLGDDYNPSLSISGLVLS-IISMLSSAKEK 122 (125)
T ss_dssp BCT-TSBBCCGGGTTTCCTTCCHHHHHHH-HHHHHC-----
T ss_pred CCC-CCEEEchhcCCCCCCCCcHHHHHHH-HHHHHhCcccc
Confidence 995 9999999999999999999999998 99999999865
No 44
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=6.5e-40 Score=252.33 Aligned_cols=126 Identities=16% Similarity=0.293 Sum_probs=114.4
Q ss_pred CHHHHHHHHHHhc----CCCCcEEEeec-C--CcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecccccc
Q 030092 3 SPSKRREMDLMKL----MMSDYKVEMIN-D--GIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHP 75 (183)
Q Consensus 3 s~~kRl~kEl~~l----~~~gi~v~~~~-~--~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 75 (183)
++.+||++||+++ ++.|+++.+.. + |+++|+++|.||++|||+||+|+|.|.||++||++||+|+|+|+||||
T Consensus 21 ~~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HP 100 (156)
T 2q0v_A 21 PRSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIEMS 100 (156)
T ss_dssp CHHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCT
T ss_pred hHHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEcccccC
Confidence 3789999999986 46689998854 3 599999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCee---EccCCCCCCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHhC
Q 030092 76 NIDEMSGSV---CLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRD 131 (183)
Q Consensus 76 nV~~~~G~i---cl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~~ 131 (183)
||+. +|.| |+++|+ +|+|+++|.+||.+ |++||.+|++++|+|.+||.+|.+|
T Consensus 101 NV~~-~G~icisCL~iL~-~WsP~~ti~~vL~s-I~~ll~~Pn~~~p~n~~aa~~y~~n 156 (156)
T 2q0v_A 101 CVDN-CGRVIKNNLHILK-NWNRNYTIETILIS-LRQEMLSSANKRLPQPNEGEVYSNN 156 (156)
T ss_dssp TBCT-TSBBCGGGSHHHH-TCCTTCCHHHHHHH-HHHHTTSTTTTTCCCCCTTCBC---
T ss_pred CCcc-CCeEehhhccccc-CCCCcCcHHHHHHH-HHHHHhCCCCCCcCChHHHHHhhhC
Confidence 9995 8999 888887 59999999999998 9999999999999999999998765
No 45
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=2.3e-40 Score=250.13 Aligned_cols=126 Identities=17% Similarity=0.305 Sum_probs=113.4
Q ss_pred CCC--HHHHHHHHHHhc----CCCCcEEEeec-C--CcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecc
Q 030092 1 MSS--PSKRREMDLMKL----MMSDYKVEMIN-D--GIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNK 71 (183)
Q Consensus 1 Mss--~~kRl~kEl~~l----~~~gi~v~~~~-~--~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~ 71 (183)
|++ +.+||+||++++ ++.|+++.+.+ + |+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|+
T Consensus 2 m~~~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 81 (138)
T 1jat_B 2 MSKVPRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISK 81 (138)
T ss_dssp -CCCCHHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBC
T ss_pred cchHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcc
Confidence 775 779999999986 46799998854 3 49999999999999999999999999999999999999999999
Q ss_pred cccceeeCCCCee--EccCCCCCCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHH
Q 030092 72 IYHPNIDEMSGSV--CLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALL 128 (183)
Q Consensus 72 i~HPnV~~~~G~i--cl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~ 128 (183)
||||||+..+|.| |+++|. +|+|+++|.+||.+ |++||.+|++++|+|.+|+.+|
T Consensus 82 i~HPnv~~~~G~i~~cL~~l~-~W~p~~~i~~vl~~-i~~ll~~pn~~~p~~~~~~~~y 138 (138)
T 1jat_B 82 INLPCVNPTTGEVQTDFHTLR-DWKRAYTMETLLLD-LRKEMATPANKKLRQPKEGETF 138 (138)
T ss_dssp CCCTTBCTTTCBBCTTSHHHH-TCCTTCCHHHHHHH-HHHHHTSHHHHTSCCCCTTCBC
T ss_pred cccCCEeCCCCEEeeecccCC-CCCCcCcHHHHHHH-HHHHHcCCCCCCCCCcchhhcC
Confidence 9999999756999 899886 89999999999998 9999999999999999988654
No 46
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=8.2e-39 Score=241.12 Aligned_cols=114 Identities=20% Similarity=0.478 Sum_probs=107.9
Q ss_pred CCCHHHHHHHHHHhc---CCCCcEEEeecCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeccc-ccce
Q 030092 1 MSSPSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKI-YHPN 76 (183)
Q Consensus 1 Mss~~kRl~kEl~~l---~~~gi~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i-~HPn 76 (183)
|+++.+||++|++++ ++.|+++.+.++|+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|++ ||||
T Consensus 18 ~~~~~~RL~kEl~~l~~~~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPn 97 (136)
T 2h2y_A 18 LGNANYRIQKELNNFLKNPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTH 97 (136)
T ss_dssp TTSHHHHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCTT
T ss_pred chHHHHHHHHHHHHHHhCCCCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCc
Confidence 456889999999987 678999999999999999999999999999999999999999999999999999996 9999
Q ss_pred eeCCCCeeEccCCCCCCCCccchHhHHHHHHHHhhcCCCC
Q 030092 77 IDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNP 116 (183)
Q Consensus 77 V~~~~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~~p~~ 116 (183)
|+. +|.||+++|+++|+|+++|.+||.+ |++||.+|+.
T Consensus 98 v~~-~G~ICl~iL~~~WsP~~ti~~vL~s-i~sll~~p~~ 135 (136)
T 2h2y_A 98 VYS-NGDICLSVLGDDYNPSLSISGLILS-IISMLSSAKE 135 (136)
T ss_dssp BCT-TCCBCCGGGTTTCCTTCCHHHHHHH-HHHHHSSSCC
T ss_pred CCC-CCEEECccccCCCCCCCcHHHHHHH-HHHHHhCcCc
Confidence 995 9999999999999999999999998 9999999874
No 47
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=6.3e-39 Score=247.61 Aligned_cols=121 Identities=19% Similarity=0.320 Sum_probs=111.2
Q ss_pred HHHHHHHHHHhc---CCCC-cEEEee-cCC--cceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecccccce
Q 030092 4 PSKRREMDLMKL---MMSD-YKVEMI-NDG--IQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPN 76 (183)
Q Consensus 4 ~~kRl~kEl~~l---~~~g-i~v~~~-~~~--~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 76 (183)
+.+||+||++++ ++.| +.+.+. ++| +++|+++|.||++|||+||+|++.|.||++||++||+|+|+|+|||||
T Consensus 26 ~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPN 105 (160)
T 2a4d_A 26 RNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNG 105 (160)
T ss_dssp HHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTT
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCceeCC
Confidence 689999999987 4567 777774 444 899999999999999999999999999999999999999999999999
Q ss_pred eeCCCCeeEccCCC--CCCCCccchHhHHHHHHHHhhc-CCCCCCCccHHHH
Q 030092 77 IDEMSGSVCLDVIN--QTWSPMFDLVNVFEVFLPQLLL-YPNPSDPLNGEAA 125 (183)
Q Consensus 77 V~~~~G~icl~~l~--~~W~p~~~i~~il~~~i~~ll~-~p~~~~p~n~ea~ 125 (183)
|+..+|.||+++|. ++|+|+++|++||.+ |++||. +||+++|+|.|||
T Consensus 106 V~~~~G~ICl~iL~~~~~WsP~~ti~~vL~s-I~~ll~~~pn~~~P~n~eaa 156 (160)
T 2a4d_A 106 VNSSNGVVDPRAISVLAKWQNSYSIKVVLQE-LRRLMMSKENMKLPQPPEGQ 156 (160)
T ss_dssp BCTTTCBBCGGGSHHHHTCCTTCCHHHHHHH-HHHHHTSTTTTTCCCCCTTC
T ss_pred EECCCCEEehhhcCCccCCCccCcHHHHHHH-HHHHHccCCCCCCCCChhhc
Confidence 99669999999998 899999999999998 999995 7999999999987
No 48
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.7e-38 Score=237.47 Aligned_cols=110 Identities=24% Similarity=0.564 Sum_probs=103.1
Q ss_pred CCCHHHHHHHHHHhc---CCCCcEEE--eecCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecccc--
Q 030092 1 MSSPSKRREMDLMKL---MMSDYKVE--MINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIY-- 73 (183)
Q Consensus 1 Mss~~kRl~kEl~~l---~~~gi~v~--~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~-- 73 (183)
|+++.+||++|++++ +++|+++. +.++|+++|+++|.||++|||+||+|++.|.||++||++||+|+|.|++|
T Consensus 20 Ms~~~~RL~kEl~~l~~~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~ 99 (136)
T 2a7l_A 20 MASMQKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPV 99 (136)
T ss_dssp GTTSCHHHHHHHHHHHHSCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCC
T ss_pred ccHHHHHHHHHHHHHHhCCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCC
Confidence 777669999999987 77899865 78889999999999999999999999999999999999999999999999
Q ss_pred cceeeCCCCeeEccCCCCCCCCccchHhHHHHHHHHhhc
Q 030092 74 HPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLL 112 (183)
Q Consensus 74 HPnV~~~~G~icl~~l~~~W~p~~~i~~il~~~i~~ll~ 112 (183)
||||+. +|.||+++|+++|+|+++|.+||.+ |++||.
T Consensus 100 HPNV~~-~G~ICL~iL~~~WsP~~ti~~vL~s-I~slL~ 136 (136)
T 2a7l_A 100 HPHVYS-NGHICLSILTEDWSPALSVQSVCLS-IISMLS 136 (136)
T ss_dssp BTTBCT-TCBBCCGGGTTTCCTTSCHHHHHHH-HHHHTC
T ss_pred CccCCC-CCeEEchhcCCCCCCCCcHHHHHHH-HHHHhC
Confidence 999995 9999999999999999999999998 999874
No 49
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=3e-38 Score=246.07 Aligned_cols=121 Identities=19% Similarity=0.320 Sum_probs=111.0
Q ss_pred HHHHHHHHHHhc---CCCC-cEEEee-cCC--cceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecccccce
Q 030092 4 PSKRREMDLMKL---MMSD-YKVEMI-NDG--IQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPN 76 (183)
Q Consensus 4 ~~kRl~kEl~~l---~~~g-i~v~~~-~~~--~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 76 (183)
+.+||++||+++ ++.| +.+.+. ++| +++|+++|.||++|||+||+|++.|.||++||++||+|+|+|+|||||
T Consensus 36 ~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPN 115 (170)
T 2hlw_A 36 RNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNG 115 (170)
T ss_dssp HHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCCCSS
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEecccccCC
Confidence 789999999987 5567 677763 444 999999999999999999999999999999999999999999999999
Q ss_pred eeCCCCeeEccCCC--CCCCCccchHhHHHHHHHHhhc-CCCCCCCccHHHH
Q 030092 77 IDEMSGSVCLDVIN--QTWSPMFDLVNVFEVFLPQLLL-YPNPSDPLNGEAA 125 (183)
Q Consensus 77 V~~~~G~icl~~l~--~~W~p~~~i~~il~~~i~~ll~-~p~~~~p~n~ea~ 125 (183)
|+..+|.||+++|. ++|+|+++|.+||.+ |++||. .||+++|+|.|||
T Consensus 116 V~~~~G~ICl~iL~~~~~WsP~~ti~~vL~s-I~~ll~~~pn~~~P~n~eaa 166 (170)
T 2hlw_A 116 VNSSNGVVDPRAISVLAKWQNSYSIKVVLQE-LRRLMMSKENMKLPQPPEGQ 166 (170)
T ss_dssp BCSSSCBBCTTTCHHHHTCCSSCCHHHHHHH-HHHHHHSTTTSSSCCCSSCC
T ss_pred EeCCCCEEEhhhcCCCCCCCccCcHHHHHHH-HHHHHccCCCCCCCCCcccc
Confidence 99669999999998 899999999999998 999997 5999999999987
No 50
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2e-35 Score=233.41 Aligned_cols=137 Identities=20% Similarity=0.439 Sum_probs=112.5
Q ss_pred HHHHHHHHHHhc---CCCCcEEEeecCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecccccceeeCC
Q 030092 4 PSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEM 80 (183)
Q Consensus 4 ~~kRl~kEl~~l---~~~gi~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~~ 80 (183)
+.+||++|++.+ ++.||++.+.++|+++|+++|.||++|||+||+|+|.|.||++||++||+|+|.|+ ||||+.
T Consensus 15 a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~~~~~~- 91 (187)
T 2f4w_A 15 ATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKC- 91 (187)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CSSBCT-
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--Cceecc-
Confidence 689999999987 77899999999999999999999999999999999999999999999999999999 999995
Q ss_pred CCeeEccCC---CCCCCCccchHhHHHHHHHHhhcCCCCCCC---ccHHHHHHHHhCHHHHHHHHHHHHH
Q 030092 81 SGSVCLDVI---NQTWSPMFDLVNVFEVFLPQLLLYPNPSDP---LNGEAAALLMRDRAAYEQRVKEYRE 144 (183)
Q Consensus 81 ~G~icl~~l---~~~W~p~~~i~~il~~~i~~ll~~p~~~~p---~n~ea~~~~~~~~~~f~~~~r~~~~ 144 (183)
+|.||+++| .++|+|+++|.+||.+ |++||.+|+++.. ......+.|..+...|+.+.+.+.+
T Consensus 92 ~G~ICL~iL~~~~~~W~P~~ti~~vL~s-i~sll~~p~p~~g~~~~~~~~r~~~a~~s~~~~~~~~~f~~ 160 (187)
T 2f4w_A 92 NTRLCLSITDFHPDTWNPAWSVSTILTG-LLSFMVEKGPTLGSIETSDFTKRQLAVQSLAFNLKDKVFCE 160 (187)
T ss_dssp TSCBC----------CCTTCCHHHHHHH-HHHHHHSCCCCTTBCCCCHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred CCeEeeeccccCccCCCCcCcHHHHHHH-HHHHhcCCCCCCcccccChHHHHHHHHHHHHHhhcCchHHH
Confidence 899999999 6899999999999988 9999999988643 2345555666666666655544443
No 51
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00 E-value=2.7e-37 Score=243.90 Aligned_cols=139 Identities=19% Similarity=0.346 Sum_probs=122.4
Q ss_pred CCC-HHHHHHHHHHhc---C---CCCcEEEeecCCcceEEEEEeCC-CCCCCCC-----------CEEEEEEEcCCCCCC
Q 030092 1 MSS-PSKRREMDLMKL---M---MSDYKVEMINDGIQEFYVHFQGP-NESPYHG-----------GVWRIRVELPDAYPY 61 (183)
Q Consensus 1 Mss-~~kRl~kEl~~l---~---~~gi~v~~~~~~~~~w~~~i~Gp-~~tpyeg-----------g~f~~~i~fp~~YP~ 61 (183)
|++ +.+||++||+++ + +.++++.+.++|+++|.++|.|| ++|||+| |+|+|.|.||++||+
T Consensus 24 ~s~~a~~RL~kEl~~l~~~~~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP~ 103 (186)
T 1zuo_A 24 GSVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPF 103 (186)
T ss_dssp CCHHHHHHHHHHHHHHHTSHHHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTTS
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCCC
Confidence 454 789999999987 3 46899999999999999999998 9999998 899999999999999
Q ss_pred CCCceeEecccccc-eeeCCCCeeEccCCC-CCCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHH
Q 030092 62 KSPSIGFVNKIYHP-NIDEMSGSVCLDVIN-QTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRV 139 (183)
Q Consensus 62 ~pP~v~f~t~i~HP-nV~~~~G~icl~~l~-~~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~~~~~~f~~~~ 139 (183)
+||+|+|.|++||| ||+ .+|.||+++|. ++|+|+++|.+||++ |++||.+|+... .|..++.+|.+++
T Consensus 104 ~PP~V~f~tpi~hPnnV~-~~G~ICL~iL~~~~WsP~~ti~~VL~s-I~slL~~p~a~~--------~~~~~~~~Y~~~~ 173 (186)
T 1zuo_A 104 DPPFVRVVLPVLSGGYVL-GGGALCMELLTKQGWSSAYSIESVIMQ-INATLVKGKARV--------QFGANKNQYNLAR 173 (186)
T ss_dssp SCCEEEEEESCEESTTBC-GGGBBCCGGGSTTTCCTTSCHHHHHHH-HHHHHHHTTCEE--------CTTCCTTCCCHHH
T ss_pred CCCeEEEeCCccCCCccC-CCCcEEeccCCCCCCCCcCcHHHHHHH-HHHHHcCCChhH--------hhccCHHHHhHHH
Confidence 99999999999999 699 59999999997 799999999999998 999999986532 3455677888888
Q ss_pred HHHHHHHccc
Q 030092 140 KEYREKYAKA 149 (183)
Q Consensus 140 r~~~~~~a~~ 149 (183)
++++.+.+..
T Consensus 174 ~~~~~~~~~~ 183 (186)
T 1zuo_A 174 AQQSYNSIVQ 183 (186)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8887776543
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.93 E-value=1.5e-27 Score=182.80 Aligned_cols=112 Identities=19% Similarity=0.299 Sum_probs=95.2
Q ss_pred HHHHHHHHHhcCCCCcEEEeecCCcceEEEEEeCCCCCCCCCC----------EEEEEEEcCCCCCCCCCceeEecc-cc
Q 030092 5 SKRREMDLMKLMMSDYKVEMINDGIQEFYVHFQGPNESPYHGG----------VWRIRVELPDAYPYKSPSIGFVNK-IY 73 (183)
Q Consensus 5 ~kRl~kEl~~l~~~gi~v~~~~~~~~~w~~~i~Gp~~tpyegg----------~f~~~i~fp~~YP~~pP~v~f~t~-i~ 73 (183)
.+||++|++++.. ++.+..+|+..|.+++.||.||+|+|| .|.++|.||.+||++||+|+|.+. +|
T Consensus 34 ~~RL~eE~k~L~k---~v~p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~~~~~~ 110 (172)
T 2z6o_A 34 VQRLKEEYQSLIR---YVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPELDGK 110 (172)
T ss_dssp HHHHHHHHHHHHH---HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGGTTT
T ss_pred HHHHHHHHHHHHH---HhccCccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeCCCCCC
Confidence 8999999998855 466777899999999999999999999 999999999999999999999998 99
Q ss_pred cceeeCCCCeeEccCC-CC---CCCCccchHhHHHHHHHHhhcCCCCCCCccHHHHHHHH
Q 030092 74 HPNIDEMSGSVCLDVI-NQ---TWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLM 129 (183)
Q Consensus 74 HPnV~~~~G~icl~~l-~~---~W~p~~~i~~il~~~i~~ll~~p~~~~p~n~ea~~~~~ 129 (183)
|||||. +|+|||++| +. .|+|.++|..+|..++ ..++..|+..+..
T Consensus 111 hpnmY~-~G~ICLdIL~kp~Ws~~~P~~~IahiL~lgl---------~pwla~eip~lv~ 160 (172)
T 2z6o_A 111 TAKMYR-GGKICLTDHFKPLWARNVPKFGLAHLMALGL---------GPWLAVEIPDLIQ 160 (172)
T ss_dssp CSSBCT-TSBBCCCTTHHHHHHHHTTSCCHHHHHHHTH---------HHHHHHHHHHHHH
T ss_pred CCCCCC-CCcEechhhccccccccCCccCHHHHHhhcc---------CchhhhhhHHHHH
Confidence 999995 899999999 43 4569999999995432 2345556655543
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.77 E-value=6.6e-19 Score=135.55 Aligned_cols=110 Identities=23% Similarity=0.390 Sum_probs=88.4
Q ss_pred HHHHHHHHhc--CCC----CcEEEeecCCcceEEEEEeCCCCCCCCCCE---EEEEEEcCCCCCCCCCceeEecc-----
Q 030092 6 KRREMDLMKL--MMS----DYKVEMINDGIQEFYVHFQGPNESPYHGGV---WRIRVELPDAYPYKSPSIGFVNK----- 71 (183)
Q Consensus 6 kRl~kEl~~l--~~~----gi~v~~~~~~~~~w~~~i~Gp~~tpyegg~---f~~~i~fp~~YP~~pP~v~f~t~----- 71 (183)
+|..+|+..+ .-+ ...+...++....+.+.+.|.-.++|+||. |.+.|.||.+||++||.|.|.++
T Consensus 31 ~~~~~dv~~~l~~yp~L~p~t~~yt~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m~ 110 (162)
T 3r3q_A 31 RTTFHDSLALLDNFHSLRPRTRVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMN 110 (162)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCTT
T ss_pred hHHHHHHHHHHHhCCCCceeeeeEEcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCcccc
Confidence 4556666554 112 233445556677777778887779999999 88999999999999999988651
Q ss_pred -----cc-cceeeCCCCeeEccCCCCCCCC-ccchHhHHHHHHHHhhcCCCCCC
Q 030092 72 -----IY-HPNIDEMSGSVCLDVINQTWSP-MFDLVNVFEVFLPQLLLYPNPSD 118 (183)
Q Consensus 72 -----i~-HPnV~~~~G~icl~~l~~~W~p-~~~i~~il~~~i~~ll~~p~~~~ 118 (183)
|+ ||||+. +|+||+++|. +|++ +.+|.++|++ |+++|.+|+++.
T Consensus 111 ~~~~~I~~hpnVD~-~G~I~lpyL~-~W~p~~s~L~~ll~~-l~~lf~ep~~d~ 161 (162)
T 3r3q_A 111 TISSSLPIQEYIDS-NGWIALPILH-AWDPAAMNLIMVVQE-LMSLLHEPPQDQ 161 (162)
T ss_dssp TSCTTSTHHHHBCT-TSBBCCGGGG-SCCGGGCCHHHHHHH-HHHTTSCCCCCC
T ss_pred ccccccCCCCCCCC-CCcEeCcccc-cCCCCcCcHHHHHHH-HHHHhcCCCCCC
Confidence 77 999994 9999999995 6999 6899999988 999999999875
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.68 E-value=1.8e-18 Score=129.98 Aligned_cols=92 Identities=17% Similarity=0.394 Sum_probs=75.6
Q ss_pred HHHHHHHHHhcCCCCcEEEeecCCcceEEEEEeCCCCCCCCCC----------EEEEEEEcCCCCCCCCCceeEecc-cc
Q 030092 5 SKRREMDLMKLMMSDYKVEMINDGIQEFYVHFQGPNESPYHGG----------VWRIRVELPDAYPYKSPSIGFVNK-IY 73 (183)
Q Consensus 5 ~kRl~kEl~~l~~~gi~v~~~~~~~~~w~~~i~Gp~~tpyegg----------~f~~~i~fp~~YP~~pP~v~f~t~-i~ 73 (183)
.+||..|++.|-. +|+....+-..|...+.||.||+|.|+ .|.++|.||.+||..||+|+|.+. .+
T Consensus 36 ~~RlkeEy~alI~---yv~~nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp~ldgk 112 (168)
T 3kpa_A 36 TARLKEEYASLIT---YVEHNKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALPELEGK 112 (168)
T ss_dssp HHHHHHHHHHHHH---HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGGTTT
T ss_pred HHHHHHHHHHHHH---HHHhcccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeecccccCc
Confidence 4789999987632 233344456779999999999999999 999999999999999999999995 89
Q ss_pred cceeeCCCCeeEccCCCCCCCCc-------cchHhHH
Q 030092 74 HPNIDEMSGSVCLDVINQTWSPM-------FDLVNVF 103 (183)
Q Consensus 74 HPnV~~~~G~icl~~l~~~W~p~-------~~i~~il 103 (183)
|||++. +|+|||+++ |+|. ++|...|
T Consensus 113 t~kmYr-~GkICLdIh---wkPlW~~n~P~fGiahal 145 (168)
T 3kpa_A 113 TVKMYR-GGKICMTTH---FFPLWARNVPYFGISHVL 145 (168)
T ss_dssp CSSEET-TTEECCCTT---HHHHHHHTTTTCCHHHHH
T ss_pred CccccC-CCcEEeccc---cchhhHhcCCchhHHHHH
Confidence 999994 999999997 6655 4555555
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.45 E-value=9.9e-14 Score=104.92 Aligned_cols=78 Identities=24% Similarity=0.508 Sum_probs=67.8
Q ss_pred CCcceEEEEEeCCCCCCCCCCEEEE--EEEcCCCCCCCCCceeEecc------cccceeeCCCCeeEccCCCCCCCC-cc
Q 030092 27 DGIQEFYVHFQGPNESPYHGGVWRI--RVELPDAYPYKSPSIGFVNK------IYHPNIDEMSGSVCLDVINQTWSP-MF 97 (183)
Q Consensus 27 ~~~~~w~~~i~Gp~~tpyegg~f~~--~i~fp~~YP~~pP~v~f~t~------i~HPnV~~~~G~icl~~l~~~W~p-~~ 97 (183)
.++..|.++|. .+|+|+.|.+ .|.||.+||++||.| |.++ .+||||+. +|+||+..|.+ |++ ..
T Consensus 51 ~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~~~~Vd~-~G~i~lpyL~~-W~~~~s 123 (146)
T 3obq_A 51 RELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKTGKHVDA-NGKIYLPYLHE-WKHPQS 123 (146)
T ss_dssp CEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECCBTTBCT-TCBBCCHHHHT-CCTTTC
T ss_pred heEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEECCCCCCCC-CCCEecccccc-cCCCCC
Confidence 47899999996 6899999985 999999999999999 6665 58999995 99999999965 987 88
Q ss_pred chHhHHHHHHHHhhc
Q 030092 98 DLVNVFEVFLPQLLL 112 (183)
Q Consensus 98 ~i~~il~~~i~~ll~ 112 (183)
+|.++|.. ++.+|.
T Consensus 124 nL~~ll~~-l~~~F~ 137 (146)
T 3obq_A 124 DLLGLIQV-MIVVFG 137 (146)
T ss_dssp CHHHHHHH-HHHHHH
T ss_pred CHHHHHHH-HHHHHh
Confidence 99999988 777765
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.54 E-value=0.008 Score=43.25 Aligned_cols=68 Identities=12% Similarity=0.235 Sum_probs=42.5
Q ss_pred CCCHHHHHHHHHHhc---CCCCcEEEeecCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEec
Q 030092 1 MSSPSKRREMDLMKL---MMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVN 70 (183)
Q Consensus 1 Mss~~kRl~kEl~~l---~~~gi~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t 70 (183)
|.....+...|+..| -+..+.+ .......+.+.|..-.+..-..-.+.+.|.||++||..||.|.+.+
T Consensus 8 m~~~~e~q~~EleaL~sIy~d~~~~--~~~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 8 MTDYGEEQRNELEALESIYPDSFTV--LSENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp CCCHHHHHHHHHHHHHHHCSSSEEE--CCSSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred CCChHHHHHHHHHHHHHHccCceEE--ccCCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 434456677788765 3334433 2223456666665222222234478999999999999999998754
No 57
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=94.71 E-value=0.12 Score=37.35 Aligned_cols=41 Identities=20% Similarity=0.380 Sum_probs=29.5
Q ss_pred cceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEec
Q 030092 29 IQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVN 70 (183)
Q Consensus 29 ~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t 70 (183)
...+.+.|.+..+ .-..-.+.+.|.+|++||..||.|.+.+
T Consensus 45 ~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 85 (138)
T 2yz0_A 45 QIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKN 85 (138)
T ss_dssp CSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEEC
T ss_pred CcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEec
Confidence 4567777763222 1123478899999999999999998765
No 58
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=94.49 E-value=0.28 Score=37.93 Aligned_cols=77 Identities=14% Similarity=0.230 Sum_probs=55.4
Q ss_pred HHHHHHHhcCCCCcEEEeecCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecccccceeeCCCCeeEc
Q 030092 7 RREMDLMKLMMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEMSGSVCL 86 (183)
Q Consensus 7 Rl~kEl~~l~~~gi~v~~~~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~~~~G~icl 86 (183)
||.+|+..+.=.- +.-.+.++....+.+..-. |....+.|.++.+||.++|.+...-|+ ..+
T Consensus 5 ~li~Ei~~iGW~~--l~~id~~~~~i~l~~~D~~-----gR~H~l~v~l~~~yp~~~P~~~~DlP~-~~~---------- 66 (186)
T 3zqs_A 5 SLIEEIGTLGWDK--LVYADTCFSTIKLKAEDAS-----GREHLITLKLKAKYPAESPDYFVDFPV-PFC---------- 66 (186)
T ss_dssp SHHHHHHHHCGGG--EEEECTTSSEEEEEEECTT-----SCEEEEEEECCTTTTTSCCEEECCCSS-CCC----------
T ss_pred HHHHHHHHhCCce--eeeecCCccEEEEEEEeCC-----CCeEEEEEEECCCCCCCCCeeEEcCCC-Ccc----------
Confidence 5777777663221 3333567888888887544 779999999999999999987655443 111
Q ss_pred cCCCCCCCCccchHhHHHH
Q 030092 87 DVINQTWSPMFDLVNVFEV 105 (183)
Q Consensus 87 ~~l~~~W~p~~~i~~il~~ 105 (183)
-.|++..++..++..
T Consensus 67 ----~~w~~~ssL~~v~~q 81 (186)
T 3zqs_A 67 ----ASWTPQSSLISIYSQ 81 (186)
T ss_dssp ----CCCCTTCCHHHHHHH
T ss_pred ----cccCCCccHHHHHHH
Confidence 259999999998877
No 59
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=94.28 E-value=0.31 Score=34.68 Aligned_cols=65 Identities=17% Similarity=0.262 Sum_probs=39.3
Q ss_pred HHHHHHHHhc---CCCCcEEEeec--CCcceEEEEEeCCCCCCC--CCCEEEEEEEcCCCCCCCCCceeEec
Q 030092 6 KRREMDLMKL---MMSDYKVEMIN--DGIQEFYVHFQGPNESPY--HGGVWRIRVELPDAYPYKSPSIGFVN 70 (183)
Q Consensus 6 kRl~kEl~~l---~~~gi~v~~~~--~~~~~w~~~i~Gp~~tpy--egg~f~~~i~fp~~YP~~pP~v~f~t 70 (183)
.++..|+..| -...+.+.... .....+.+.|..+.+..- ..-.+.+.|.||++||..+|.|.+.+
T Consensus 11 e~~~~EleaL~SIY~de~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~ 82 (128)
T 2day_A 11 WVLPSEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRN 82 (128)
T ss_dssp CHHHHHHHHHHHHSTTTEEEECCTTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCceEEecCCCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEc
Confidence 4567777665 33445443221 134455556643222111 12478899999999999999998776
No 60
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.68 E-value=0.24 Score=35.34 Aligned_cols=63 Identities=17% Similarity=0.160 Sum_probs=37.9
Q ss_pred HHHHHHHHhc----C-CCCcEEEee-cCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEe
Q 030092 6 KRREMDLMKL----M-MSDYKVEMI-NDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFV 69 (183)
Q Consensus 6 kRl~kEl~~l----~-~~gi~v~~~-~~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~ 69 (183)
.+...|+..| + +..+.+.-. ..+...+.+.|.. .+..=..-.+.+.|.+|.+||..||.|.+.
T Consensus 10 e~q~~EleaL~SIy~d~~e~~~~~~~~~~~~~f~i~l~~-~~~~~~~~~~~L~~~~p~~YP~~~P~i~l~ 78 (128)
T 2ebk_A 10 EPVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKA-EGFMDADIPLELVFHLPVNYPSCLPGISIN 78 (128)
T ss_dssp HHHHHHHHHHHHHHCCTTTCCCSEECSSSCEEEEEEEEC-CTTTTCCCEEEEEEEECSSTTSSCCCCCCC
T ss_pred HHHHHHHHHHHHHcCCCCceEEecCCCCCCCeEEEEecC-CCCCCCCeEEEEEEECCCCCCCCCCeEEEE
Confidence 4556677655 3 123443221 1234577777753 221111247899999999999999998755
No 61
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=92.46 E-value=0.73 Score=34.13 Aligned_cols=23 Identities=22% Similarity=0.394 Sum_probs=20.9
Q ss_pred EEEEEEEcCCCCCCCCCceeEec
Q 030092 48 VWRIRVELPDAYPYKSPSIGFVN 70 (183)
Q Consensus 48 ~f~~~i~fp~~YP~~pP~v~f~t 70 (183)
.+.+.|.+|.+||..+|.|...+
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~ 98 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRS 98 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEEC
T ss_pred eEEEEEEcCCCCCCCCCcEEEEe
Confidence 79999999999999999998665
No 62
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=92.34 E-value=0.58 Score=33.56 Aligned_cols=66 Identities=24% Similarity=0.265 Sum_probs=38.4
Q ss_pred HHHHHHHHHHhc---CCCCcEEEeecC-----CcceEEEEEeCCCCC--CCCCCEEEEEEEcCCCCCCCCCceeEec
Q 030092 4 PSKRREMDLMKL---MMSDYKVEMIND-----GIQEFYVHFQGPNES--PYHGGVWRIRVELPDAYPYKSPSIGFVN 70 (183)
Q Consensus 4 ~~kRl~kEl~~l---~~~gi~v~~~~~-----~~~~w~~~i~Gp~~t--pyegg~f~~~i~fp~~YP~~pP~v~f~t 70 (183)
...+...|+..| -...+.+..... ....+.+.|. +.+. .-..-.+.+.|.||++||..+|.|.+..
T Consensus 11 ~~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 86 (137)
T 1ukx_A 11 YSQRQDHELQALEAIYGSDFQDLRPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKN 86 (137)
T ss_dssp HHHHHHHHHHHHHHHTSSSEEECCCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEE
T ss_pred hHHHHHHHHHHHHHHCcccceeccCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEec
Confidence 345666777655 233343321111 1345666664 3220 0012468999999999999999998753
No 63
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=88.56 E-value=0.37 Score=35.52 Aligned_cols=23 Identities=26% Similarity=0.440 Sum_probs=20.6
Q ss_pred EEEEEEEcCCCCCCCCCceeEec
Q 030092 48 VWRIRVELPDAYPYKSPSIGFVN 70 (183)
Q Consensus 48 ~f~~~i~fp~~YP~~pP~v~f~t 70 (183)
.+.+.|.+|.+||..||.|....
T Consensus 74 ~l~L~v~lP~~YP~~~P~i~l~~ 96 (152)
T 2dax_A 74 MFSLACILPFKYPAVLPEITVRS 96 (152)
T ss_dssp EEEEEEEECSSTTSSCCCCEEEC
T ss_pred eEEEEEECCCCCCCCCCeEEEEc
Confidence 68899999999999999998665
No 64
>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A
Probab=84.40 E-value=0.23 Score=35.06 Aligned_cols=40 Identities=10% Similarity=0.052 Sum_probs=0.0
Q ss_pred CCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHccccccc
Q 030092 114 PNPSDPLNGEAAALLMRDRAAYEQRVKEYREKYAKAEDIE 153 (183)
Q Consensus 114 p~~~~p~n~ea~~~~~~~~~~f~~~~r~~~~~~a~~~~~~ 153 (183)
.....|.+.++|++|+++++.|...+|.|+.-||......
T Consensus 21 ~~~~~PQDA~VA~qy~~~~~~f~~TAr~WT~~~a~~~~~~ 60 (108)
T 2cwb_A 21 ETTTEAVDAATAEKVFKQYANDNGVDGEWTYDDATKTFTV 60 (108)
T ss_dssp ----------------------------------------
T ss_pred cccCCchhHHHHHHHHhchhccccccccccccCcCCCCCC
Confidence 3455799999999999999999999999998887655444
No 65
>2byk_A Chrac-16; nucleosome sliding, histone fold, DNA-binding protein; 2.4A {Drosophila melanogaster} SCOP: a.22.1.3 PDB: 2bym_A
Probab=31.30 E-value=64 Score=23.31 Aligned_cols=29 Identities=7% Similarity=0.045 Sum_probs=22.4
Q ss_pred CccHHHHHHHHhCHHHHHHHHHHHHHHHc
Q 030092 119 PLNGEAAALLMRDRAAYEQRVKEYREKYA 147 (183)
Q Consensus 119 p~n~ea~~~~~~~~~~f~~~~r~~~~~~a 147 (183)
-+..+|..++..--+.|...+-..+..+|
T Consensus 37 ~Is~eA~vliakA~ElFI~~Lt~~A~~~a 65 (140)
T 2byk_A 37 LITNEVLFLMTKCTELFVRHLAGAAYTEE 65 (140)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47788887778888888888777777776
No 66
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A
Probab=29.10 E-value=1.2e+02 Score=22.87 Aligned_cols=43 Identities=16% Similarity=0.314 Sum_probs=32.2
Q ss_pred CCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCceeEecc
Q 030092 27 DGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNK 71 (183)
Q Consensus 27 ~~~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~ 71 (183)
....+|.|.+.|+.+.-...-+=++.+.+.+.||. |...+..+
T Consensus 30 ~~TH~WtVyVr~~~~edis~~v~KV~F~LHpSF~n--p~Rvv~~P 72 (175)
T 3rls_A 30 EHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPN--PVRSIEAP 72 (175)
T ss_dssp TCCEEEEEEEECGGGCCCTTTEEEEEEECCTTSSS--CEEEECSS
T ss_pred CCcEEEEEEEECCCCCChhheEEEEEEEcCCCCCC--CcEEEeCC
Confidence 35678999999987755545677888999999975 66665554
No 67
>3qrl_A Transcription initiation factor TFIID subunit 14; yeats domain, IG fold, nucleus, nuclear protein; HET: PGE; 1.70A {Saccharomyces cerevisiae} PDB: 2l7e_A
Probab=27.77 E-value=1.2e+02 Score=21.95 Aligned_cols=43 Identities=7% Similarity=0.170 Sum_probs=32.2
Q ss_pred cceEE--EEEeCCCCCCCC-CCEEEEEEEcCCCCCCCCCceeEecccc
Q 030092 29 IQEFY--VHFQGPNESPYH-GGVWRIRVELPDAYPYKSPSIGFVNKIY 73 (183)
Q Consensus 29 ~~~w~--~~i~Gp~~tpye-gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 73 (183)
+..|. +.+.|+.|.... .-+=++.+.+.+.|+. |...+..+-|
T Consensus 32 ~h~WtieV~vr~~~g~ei~~~~i~kV~f~LH~sF~n--p~r~v~~pPF 77 (140)
T 3qrl_A 32 VRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFAN--PNRTFTDPPF 77 (140)
T ss_dssp CEEEEEEEEEECTTSCEECCTTEEEEEEECCTTSSS--CEEEECSTTC
T ss_pred ccEeeEEEEEeCCCCCcCchheEEEEEEEeCCCCCC--CeEEEcCCCc
Confidence 46898 888999888664 4566888888898874 7777766543
No 68
>2rp4_A Transcription factor P53; DMP53, oligomerization domain, tetramerizaiton domain, nucleus; NMR {Drosophila melanogaster}
Probab=27.77 E-value=1.2e+02 Score=19.41 Aligned_cols=22 Identities=23% Similarity=0.453 Sum_probs=14.4
Q ss_pred cceEEEEEeCCCCCCCCCCEEEEEEEcCC
Q 030092 29 IQEFYVHFQGPNESPYHGGVWRIRVELPD 57 (183)
Q Consensus 29 ~~~w~~~i~Gp~~tpyegg~f~~~i~fp~ 57 (183)
+..|.|.=. ..|-|++.|++|.
T Consensus 9 p~dW~VsRt-------~dGdYrL~itcpk 30 (76)
T 2rp4_A 9 AAEWNVSRT-------PDGDYRLAITCPN 30 (76)
T ss_dssp SCCCEEECC-------TTTBEEEEEEESC
T ss_pred Cccceeeec-------cCCceEEEEEeCc
Confidence 445666443 2678888888865
No 69
>2zd7_A VPS75, vacuolar protein sorting-associated protein 75; histone chaperone, VPS75, NAP1, nucleus, phosphoprotein; 1.85A {Saccharomyces cerevisiae} PDB: 3q66_A* 3q68_A* 3c9d_A 3c9b_A 3q33_B* 3q35_B* 3dm7_A
Probab=26.08 E-value=18 Score=29.13 Aligned_cols=29 Identities=10% Similarity=0.040 Sum_probs=16.5
Q ss_pred EEEEEEEcCCCCCCCCCceeEecccccceee
Q 030092 48 VWRIRVELPDAYPYKSPSIGFVNKIYHPNID 78 (183)
Q Consensus 48 ~f~~~i~fp~~YP~~pP~v~f~t~i~HPnV~ 78 (183)
-|++.+.|.+.=|+-.. +.+|+-||-+..
T Consensus 102 gf~i~F~F~~~NpyF~N--~vLtK~y~~~~~ 130 (264)
T 2zd7_A 102 DFSITFHFHGIEGDFKE--QQVTKVFQIKKG 130 (264)
T ss_dssp CEEEEEEECCBTTTBCC--EEEEEEEEEECC
T ss_pred ceEEEEEeCCCCCCccC--CeEEEEEEeccc
Confidence 48888898651122222 245666777654
No 70
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=25.06 E-value=64 Score=24.88 Aligned_cols=26 Identities=27% Similarity=0.565 Sum_probs=22.2
Q ss_pred CCCEEEEEEEcCCCCCC-----CCCceeEec
Q 030092 45 HGGVWRIRVELPDAYPY-----KSPSIGFVN 70 (183)
Q Consensus 45 egg~f~~~i~fp~~YP~-----~pP~v~f~t 70 (183)
+.|.|.|.-.+|--||. .||.|.|.-
T Consensus 109 ~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~V 139 (209)
T 2bum_A 109 GTGFWSFNTIKPGAVPGRKGSTQAPHISLII 139 (209)
T ss_dssp TTCCEEEEEECCCCCBCSTTCBCCCCEEEEE
T ss_pred CCcEEEEEEEccCcccCCCCCccCcEEEEEE
Confidence 36899999999999998 788888763
Done!