Citrus Sinensis ID: 030092

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180---
MSSPSKRREMDLMKLMMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKEYREKYAKAEDIEAAPDENSSDEEMSEDEYNSSDDAMAGKADP
cccHHHHHHHHHHHHcccccEEEEcccccEEEEEEEEccccccccccEEEEEEEccccccccccEEEECccccccccccccccEEEEcccccccccccHHHHHHHHHHHHcccccccccccHHHHHHHHHcHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccc
**********DLMKLMMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALLMRDRAAYEQRVKEYREKY*************************************
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MSSPSKRREMDLMKLMMSDYKVEMINDGIQEFYVHFQGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNIDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAxxxxxxxxxxxxxxxxxxxxxxxxxxxxEAAPDENSSDEEMSEDEYNSSDDAMAGKADP

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Ubiquitin-conjugating enzyme E2 5 Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins.confidentP42749
Ubiquitin-conjugating enzyme E2-23 kDa Catalyzes the covalent attachment of ubiquitin to other proteins.probableP16577
Ubiquitin-conjugating enzyme E2 H Accepts ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. In vitro catalyzes 'Lys-11'- and 'Lys-48'-linked polyubiquitination. Capable, in vitro, to ubiquitinate histone H2A.probableQ32LN1

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
6.-.-.-Ligases.probable
6.3.-.-Forming carbon-nitrogen bonds.probable
6.3.2.-Acid--D-amino-acid ligases (peptide synthases).probable
6.3.2.19Ubiquitin--protein ligase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1YF9, chain A
Confidence level:very confident
Coverage over the Query: 4-154
View the alignment between query and template
View the model in PyMOL