BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030094
(183 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225448554|ref|XP_002273715.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like [Vitis
vinifera]
Length = 595
Score = 296 bits (757), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 146/167 (87%), Positives = 161/167 (96%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+G+I+SPTRELSSQIY+VAQPFISTLP+VKSVLLVGGVEVK+D+KKIEEEGANLLIGTPG
Sbjct: 95 LGVILSPTRELSSQIYNVAQPFISTLPNVKSVLLVGGVEVKSDLKKIEEEGANLLIGTPG 154
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RLYDIMERMDVLDFRNLEIL+LDEADRLLDMGFQKQI+ II+RLPKLRRTGLFSATQTEA
Sbjct: 155 RLYDIMERMDVLDFRNLEILILDEADRLLDMGFQKQITSIIARLPKLRRTGLFSATQTEA 214
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVI 167
VEELSKAGLRNPVRVEVRAE+KS + S SSQQLASSKTP GL++E +
Sbjct: 215 VEELSKAGLRNPVRVEVRAEAKSLNDSVSSQQLASSKTPSGLNIEYL 261
>gi|297736552|emb|CBI25423.3| unnamed protein product [Vitis vinifera]
Length = 576
Score = 295 bits (756), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 146/167 (87%), Positives = 161/167 (96%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+G+I+SPTRELSSQIY+VAQPFISTLP+VKSVLLVGGVEVK+D+KKIEEEGANLLIGTPG
Sbjct: 95 LGVILSPTRELSSQIYNVAQPFISTLPNVKSVLLVGGVEVKSDLKKIEEEGANLLIGTPG 154
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RLYDIMERMDVLDFRNLEIL+LDEADRLLDMGFQKQI+ II+RLPKLRRTGLFSATQTEA
Sbjct: 155 RLYDIMERMDVLDFRNLEILILDEADRLLDMGFQKQITSIIARLPKLRRTGLFSATQTEA 214
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVI 167
VEELSKAGLRNPVRVEVRAE+KS + S SSQQLASSKTP GL++E +
Sbjct: 215 VEELSKAGLRNPVRVEVRAEAKSLNDSVSSQQLASSKTPSGLNIEYL 261
>gi|356568033|ref|XP_003552218.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like [Glycine
max]
Length = 589
Score = 278 bits (712), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 136/167 (81%), Positives = 154/167 (92%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+G+IISPTRELS+QIYHVAQPFISTL +VKS+LLVGG EVKAD+KKIEEEGAN+LIGTPG
Sbjct: 90 LGIIISPTRELSTQIYHVAQPFISTLANVKSMLLVGGAEVKADLKKIEEEGANILIGTPG 149
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RLYDIM RMDVLD +NLEIL+LDEADRLLDMGFQKQI+ II+ LPKLRRTGLFSATQTEA
Sbjct: 150 RLYDIMNRMDVLDLKNLEILILDEADRLLDMGFQKQITSIITLLPKLRRTGLFSATQTEA 209
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVI 167
+EEL+KAGLRNPVRVEVRAE+KS + ASS+Q SSKTP GLH+E +
Sbjct: 210 IEELAKAGLRNPVRVEVRAETKSENGPASSKQPESSKTPSGLHIEYL 256
>gi|224101199|ref|XP_002312182.1| predicted protein [Populus trichocarpa]
gi|222852002|gb|EEE89549.1| predicted protein [Populus trichocarpa]
Length = 592
Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 137/167 (82%), Positives = 155/167 (92%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
MG+IISPTRELSSQIY+VAQPFI+TL + KS+LLVGG++VKADVK IEEEGANLLIGTPG
Sbjct: 92 MGIIISPTRELSSQIYNVAQPFIATLSNFKSMLLVGGMDVKADVKMIEEEGANLLIGTPG 151
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL+DIM+R+DVLDFRNLE+L+LDEADRLLDMGFQKQ++ IISRLPKLRRTGLFSATQTEA
Sbjct: 152 RLFDIMDRVDVLDFRNLEVLILDEADRLLDMGFQKQLNSIISRLPKLRRTGLFSATQTEA 211
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVI 167
VEELSKAGLRNPV+VEVRAE+KS + S S QQLA SKTP GL LE +
Sbjct: 212 VEELSKAGLRNPVKVEVRAETKSLNNSVSGQQLAPSKTPSGLLLEYL 258
>gi|356540003|ref|XP_003538481.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like isoform 1
[Glycine max]
Length = 589
Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 135/167 (80%), Positives = 151/167 (90%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+G+IISPTRELS+QIYHVAQ FISTL +VKS+LLVGG EVK D+KKIEEEGAN+LIGTPG
Sbjct: 90 LGIIISPTRELSTQIYHVAQSFISTLMNVKSMLLVGGAEVKTDIKKIEEEGANILIGTPG 149
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RLYDIM RMDVLD +NLEIL+LDEADRLLDMGFQKQI+ IIS LPKLRRTGLFSATQTEA
Sbjct: 150 RLYDIMNRMDVLDLKNLEILILDEADRLLDMGFQKQITSIISLLPKLRRTGLFSATQTEA 209
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVI 167
+EEL+KAGLRNPVRVEVRAE+KS ASS+Q SSKTP GLH+E +
Sbjct: 210 IEELAKAGLRNPVRVEVRAETKSEKGPASSKQPESSKTPSGLHIEYL 256
>gi|297806553|ref|XP_002871160.1| hypothetical protein ARALYDRAFT_908458 [Arabidopsis lyrata subsp.
lyrata]
gi|297316997|gb|EFH47419.1| hypothetical protein ARALYDRAFT_908458 [Arabidopsis lyrata subsp.
lyrata]
Length = 593
Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 135/167 (80%), Positives = 150/167 (89%), Gaps = 4/167 (2%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
MG+IISPTRELSSQIY+VAQPF+STL +V SVLLVGG EVKAD+K IEEEG NLLIGTPG
Sbjct: 92 MGVIISPTRELSSQIYNVAQPFVSTLANVNSVLLVGGREVKADMKIIEEEGCNLLIGTPG 151
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL DIMERM++LDFRNLEIL+LDEADRLL+MGFQ+Q++YIISRLPK RRTGLFSATQTE
Sbjct: 152 RLSDIMERMEILDFRNLEILILDEADRLLEMGFQRQVNYIISRLPKQRRTGLFSATQTEG 211
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVI 167
VEEL+KAGLRNPVRVEVRA+SKS SSQQ +SKTP GLHLE I
Sbjct: 212 VEELAKAGLRNPVRVEVRAKSKSE----SSQQFTNSKTPSGLHLEYI 254
>gi|15239115|ref|NP_196164.1| DEAD-box ATP-dependent RNA helicase 18 [Arabidopsis thaliana]
gi|75334017|sp|Q9FLB0.1|RH18_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 18
gi|10176757|dbj|BAB09988.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
gi|332003492|gb|AED90875.1| DEAD-box ATP-dependent RNA helicase 18 [Arabidopsis thaliana]
Length = 593
Score = 268 bits (686), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 133/167 (79%), Positives = 151/167 (90%), Gaps = 4/167 (2%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
MG+IISPTRELS+QIY+VAQPF+STL +V SVLLVGG EVKAD+K IEEEG N+LIGTPG
Sbjct: 92 MGVIISPTRELSTQIYNVAQPFVSTLANVNSVLLVGGREVKADMKIIEEEGCNVLIGTPG 151
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL DIMERM++LDFRNLEIL+LDEADRLL+MGFQ+Q++YIISRLPK RRTGLFSATQTE
Sbjct: 152 RLSDIMERMEILDFRNLEILILDEADRLLEMGFQRQVNYIISRLPKQRRTGLFSATQTEG 211
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVI 167
VEEL+KAGLRNPVRVEVRA+SKS SSQQL +SKTP GLHLE +
Sbjct: 212 VEELAKAGLRNPVRVEVRAKSKSE----SSQQLTNSKTPSGLHLEYM 254
>gi|255559531|ref|XP_002520785.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223539916|gb|EEF41494.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 592
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 138/177 (77%), Positives = 160/177 (90%), Gaps = 1/177 (0%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
MG+I+SPTRELSSQIY+VAQPFI TL +VKS+LLVGGV+VKADVKKIEEEGAN+LIGTPG
Sbjct: 93 MGIILSPTRELSSQIYNVAQPFIETLSNVKSMLLVGGVDVKADVKKIEEEGANILIGTPG 152
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL+DIMER+D+LDFRNLE+L+LDEADRLLDMGFQKQI+ IISRLPKLRRTGLFSATQTEA
Sbjct: 153 RLFDIMERVDILDFRNLEVLILDEADRLLDMGFQKQITSIISRLPKLRRTGLFSATQTEA 212
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNHH 177
VEEL+KAGLRNPVRVEVRA++KS + ++S QL+SSKTP GL LE + M+ H
Sbjct: 213 VEELAKAGLRNPVRVEVRAQTKSLN-ESASSQLSSSKTPSGLQLEYLECEADMKPSH 268
>gi|357461389|ref|XP_003600976.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355490024|gb|AES71227.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 659
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 132/176 (75%), Positives = 156/176 (88%), Gaps = 9/176 (5%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+G+IISPTREL+SQIYHVAQPFISTL +VKS+LLVGGVEVKAD+KKIEEEGAN+LIGTPG
Sbjct: 104 LGVIISPTRELASQIYHVAQPFISTLANVKSMLLVGGVEVKADIKKIEEEGANVLIGTPG 163
Query: 61 RLYDIMERMDVLDFRNLE---------ILVLDEADRLLDMGFQKQISYIISRLPKLRRTG 111
RL+DIM RMD+LDF++ E IL+LDEADRLLDMGFQKQI+ II+ LPKLRRTG
Sbjct: 164 RLHDIMNRMDILDFKSFEVYLLEKIGHILILDEADRLLDMGFQKQINAIITELPKLRRTG 223
Query: 112 LFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVI 167
LFSATQT+AVEEL+KAGLRNPVRVEVRAE+K+ + SASS+++ SSKTP GL +E +
Sbjct: 224 LFSATQTQAVEELAKAGLRNPVRVEVRAETKTANDSASSKKIESSKTPSGLQIEYL 279
>gi|110736442|dbj|BAF00189.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
Length = 520
Score = 265 bits (676), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 132/167 (79%), Positives = 150/167 (89%), Gaps = 4/167 (2%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
MG+IISPTRELS+QIY+VAQPF+STL +V SVLLVGG EVKAD+K IEEEG N+LIGTPG
Sbjct: 92 MGVIISPTRELSTQIYNVAQPFVSTLANVNSVLLVGGREVKADMKIIEEEGCNVLIGTPG 151
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL DIMERM++LDFRNLEIL+LDEADRLL+M FQ+Q++YIISRLPK RRTGLFSATQTE
Sbjct: 152 RLSDIMERMEILDFRNLEILILDEADRLLEMRFQRQVNYIISRLPKQRRTGLFSATQTEG 211
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVI 167
VEEL+KAGLRNPVRVEVRA+SKS SSQQL +SKTP GLHLE +
Sbjct: 212 VEELAKAGLRNPVRVEVRAKSKSE----SSQQLTNSKTPSGLHLEYM 254
>gi|449460880|ref|XP_004148172.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like [Cucumis
sativus]
gi|449515784|ref|XP_004164928.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like [Cucumis
sativus]
Length = 587
Score = 262 bits (669), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 130/167 (77%), Positives = 149/167 (89%), Gaps = 2/167 (1%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
MG+IISPTRELSSQIY VA+PF+STL + K+VLLVGG +VK D+K IEEEGANLLIGTPG
Sbjct: 90 MGIIISPTRELSSQIYEVARPFVSTLSNFKAVLLVGGADVKVDMKVIEEEGANLLIGTPG 149
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL+DIM+R++ LDFRN E+L+LDEADRLLDMGFQKQI+ IISRLPKLRRTGLFSATQTEA
Sbjct: 150 RLFDIMDRIENLDFRNFEVLILDEADRLLDMGFQKQITSIISRLPKLRRTGLFSATQTEA 209
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVI 167
VEELSKAGLRNP+RVEV+AESK + SS QLASSKTP LH+E +
Sbjct: 210 VEELSKAGLRNPIRVEVKAESKPGPL--SSTQLASSKTPSSLHIEYL 254
>gi|357134923|ref|XP_003569064.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like
[Brachypodium distachyon]
Length = 644
Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 120/167 (71%), Positives = 147/167 (88%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+G+IISPTRELSSQIY+VAQPF +TL V S+LLVGG+++KA+++K+EEEGAN+L+GTPG
Sbjct: 96 LGIIISPTRELSSQIYNVAQPFFATLKGVSSILLVGGLDIKAELQKVEEEGANILVGTPG 155
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
+L+DIMER+D L+++NLEIL+LDEADRLLDMGFQKQI+ IIS+LPKLRRTGLFSATQTEA
Sbjct: 156 KLFDIMERLDTLEYKNLEILILDEADRLLDMGFQKQITSIISKLPKLRRTGLFSATQTEA 215
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVI 167
VEEL+KAGLRNPVRV+V+ E K A Q L SKTPLGL LE +
Sbjct: 216 VEELAKAGLRNPVRVQVKTEVKPSSKDAVQQDLGLSKTPLGLRLEYM 262
>gi|218187571|gb|EEC69998.1| hypothetical protein OsI_00527 [Oryza sativa Indica Group]
Length = 648
Score = 251 bits (641), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 120/181 (66%), Positives = 153/181 (84%), Gaps = 2/181 (1%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+G+IISPTRELSSQIY+VAQPF +TL V S+LLVGG ++KA++KK+EEEGAN+L+GTPG
Sbjct: 99 LGIIISPTRELSSQIYNVAQPFFATLKGVSSMLLVGGFDIKAELKKLEEEGANILVGTPG 158
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
+L+D+MER+D L+++NLEIL+LDEADRLLD+GFQKQI+ IIS+LPKLRRTGLFSATQTEA
Sbjct: 159 KLFDVMERLDTLNYKNLEILILDEADRLLDLGFQKQITSIISKLPKLRRTGLFSATQTEA 218
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNHHNLL 180
V+EL+KAGLRNPVRVEV+ E K + Q+L SKTPLGL LE + + + N + L
Sbjct: 219 VKELAKAGLRNPVRVEVKTEVKPTSKDGAQQELGPSKTPLGLRLE--YMICEASNKSSQL 276
Query: 181 I 181
+
Sbjct: 277 V 277
>gi|115434688|ref|NP_001042102.1| Os01g0164500 [Oryza sativa Japonica Group]
gi|143361417|sp|Q761Z9.2|RH18_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 18; AltName:
Full=BRI1-KD-interacting protein 115; Short=BIP115
gi|15528747|dbj|BAB64789.1| putative RNA helicase [Oryza sativa Japonica Group]
gi|21327991|dbj|BAC00580.1| putative RNA helicase [Oryza sativa Japonica Group]
gi|113531633|dbj|BAF04016.1| Os01g0164500 [Oryza sativa Japonica Group]
gi|125569150|gb|EAZ10665.1| hypothetical protein OsJ_00495 [Oryza sativa Japonica Group]
gi|215697070|dbj|BAG91064.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737306|dbj|BAG96235.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 647
Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/181 (66%), Positives = 153/181 (84%), Gaps = 2/181 (1%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+G+IISPTRELSSQIY+VAQPF +TL V S+LLVGG ++KA++KK+EEEGAN+L+GTPG
Sbjct: 98 LGIIISPTRELSSQIYNVAQPFFATLKGVSSMLLVGGFDIKAELKKLEEEGANILVGTPG 157
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
+L+D+MER+D L+++NLEIL+LDEADRLLD+GFQKQI+ IIS+LPKLRRTGLFSATQTEA
Sbjct: 158 KLFDVMERLDTLNYKNLEILILDEADRLLDLGFQKQITSIISKLPKLRRTGLFSATQTEA 217
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNHHNLL 180
V+EL+KAGLRNPVRVEV+ E K + Q+L SKTPLGL LE + + + N + L
Sbjct: 218 VKELAKAGLRNPVRVEVKTEVKPTGKDGAQQELGPSKTPLGLRLE--YMICEASNKSSQL 275
Query: 181 I 181
+
Sbjct: 276 V 276
>gi|326487426|dbj|BAJ89697.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 643
Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 114/167 (68%), Positives = 147/167 (88%), Gaps = 4/167 (2%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+G+IISPTRELSSQIY+VAQPF +TL V S+LLVGG++++ +++K+E+EGAN+L+GTPG
Sbjct: 99 LGIIISPTRELSSQIYNVAQPFFATLKGVSSILLVGGLDIRVELEKVEKEGANILVGTPG 158
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
+L+DIMER+D L++++LEIL+LDEADRLLDMGFQKQ++ IIS+LPKLRRTGLFSATQTEA
Sbjct: 159 KLFDIMERLDTLEYKHLEILILDEADRLLDMGFQKQVTSIISKLPKLRRTGLFSATQTEA 218
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVI 167
VEEL+KAGLRNPVRV+V+ E+ A+ Q L SKTPLGL LE +
Sbjct: 219 VEELAKAGLRNPVRVQVKIEAN----DAAQQDLGPSKTPLGLRLEYM 261
>gi|242051997|ref|XP_002455144.1| hypothetical protein SORBIDRAFT_03g005040 [Sorghum bicolor]
gi|241927119|gb|EES00264.1| hypothetical protein SORBIDRAFT_03g005040 [Sorghum bicolor]
Length = 644
Score = 238 bits (608), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 115/167 (68%), Positives = 144/167 (86%), Gaps = 1/167 (0%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+ +IISPTRELSSQI++VAQPF +TL V S+LLVGG+++KA++KK+EEEGAN+L+GTPG
Sbjct: 98 LALIISPTRELSSQIFNVAQPFFATLNGVSSMLLVGGLDIKAELKKVEEEGANILVGTPG 157
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
+L DIM D L+++NLEIL+LDEADRLLDMGFQK I++I+S LPKLRRTGLFSATQT+A
Sbjct: 158 KLCDIMH-TDALEYKNLEILILDEADRLLDMGFQKHINFILSMLPKLRRTGLFSATQTKA 216
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVI 167
V +LSKAGLRNP+RVEV+ E+KS A Q+L SSKTPLGL LE +
Sbjct: 217 VADLSKAGLRNPIRVEVKTEAKSTSKDAGQQELGSSKTPLGLRLEYM 263
>gi|414876218|tpg|DAA53349.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein,
partial [Zea mays]
Length = 295
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 114/166 (68%), Positives = 143/166 (86%), Gaps = 1/166 (0%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+ +IISPTRELSSQI++VAQPF +TL V S+LLVGG+++KA++KK+EEEGAN+L+GTPG
Sbjct: 95 LALIISPTRELSSQIFNVAQPFFATLNGVSSMLLVGGLDIKAELKKVEEEGANILVGTPG 154
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
+L+DIM D L+++NLEIL+LDEADRLLDMGFQK I++I+S LPKLRRTGLFSATQT+A
Sbjct: 155 KLFDIM-HTDALEYKNLEILILDEADRLLDMGFQKHINFILSMLPKLRRTGLFSATQTKA 213
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEV 166
V +LSKAGLRNP+RVEV+ E+KS A Q+L S TPLGL LEV
Sbjct: 214 VADLSKAGLRNPIRVEVKTEAKSTSKDAGQQELGPSITPLGLRLEV 259
>gi|414876217|tpg|DAA53348.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 294
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 113/167 (67%), Positives = 143/167 (85%), Gaps = 1/167 (0%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+ +IISPTRELSSQI++VAQPF +TL V S+LLVGG+++KA++KK+EEEGAN+L+GTPG
Sbjct: 95 LALIISPTRELSSQIFNVAQPFFATLNGVSSMLLVGGLDIKAELKKVEEEGANILVGTPG 154
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
+L+DIM D L+++NLEIL+LDEADRLLDMGFQK I++I+S LPKLRRTGLFSATQT+A
Sbjct: 155 KLFDIMH-TDALEYKNLEILILDEADRLLDMGFQKHINFILSMLPKLRRTGLFSATQTKA 213
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVI 167
V +LSKAGLRNP+RVEV+ E+KS A Q+L S TPLGL LE +
Sbjct: 214 VADLSKAGLRNPIRVEVKTEAKSTSKDAGQQELGPSITPLGLRLEYM 260
>gi|414876216|tpg|DAA53347.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 641
Score = 235 bits (600), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 113/167 (67%), Positives = 143/167 (85%), Gaps = 1/167 (0%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+ +IISPTRELSSQI++VAQPF +TL V S+LLVGG+++KA++KK+EEEGAN+L+GTPG
Sbjct: 95 LALIISPTRELSSQIFNVAQPFFATLNGVSSMLLVGGLDIKAELKKVEEEGANILVGTPG 154
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
+L+DIM D L+++NLEIL+LDEADRLLDMGFQK I++I+S LPKLRRTGLFSATQT+A
Sbjct: 155 KLFDIMH-TDALEYKNLEILILDEADRLLDMGFQKHINFILSMLPKLRRTGLFSATQTKA 213
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVI 167
V +LSKAGLRNP+RVEV+ E+KS A Q+L S TPLGL LE +
Sbjct: 214 VADLSKAGLRNPIRVEVKTEAKSTSKDAGQQELGPSITPLGLRLEYM 260
>gi|226499134|ref|NP_001147316.1| ATP-dependent rRNA helicase spb4 [Zea mays]
gi|195609842|gb|ACG26751.1| ATP-dependent rRNA helicase spb4 [Zea mays]
Length = 641
Score = 235 bits (599), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 113/167 (67%), Positives = 143/167 (85%), Gaps = 1/167 (0%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+ +IISPTRELSSQI++VAQPF +TL V S+LLVGG+++KA++KK+EEEGAN+L+GTPG
Sbjct: 95 LALIISPTRELSSQIFNVAQPFFATLNGVSSMLLVGGLDIKAELKKVEEEGANILVGTPG 154
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
+L+DIM D L+++NLEIL+LDEADRLLDMGFQK I++I+S LPKLRRTGLFSATQT+A
Sbjct: 155 KLFDIMH-TDALEYKNLEILILDEADRLLDMGFQKHINFILSMLPKLRRTGLFSATQTKA 213
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVI 167
V +LSKAGLRNP+RVEV+ E+KS A Q+L S TPLGL LE +
Sbjct: 214 VADLSKAGLRNPIRVEVKTEAKSTSKDAGQQELGPSITPLGLRLEYM 260
>gi|356540005|ref|XP_003538482.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like isoform 2
[Glycine max]
Length = 493
Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 112/132 (84%), Positives = 124/132 (93%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+G+IISPTRELS+QIYHVAQ FISTL +VKS+LLVGG EVK D+KKIEEEGAN+LIGTPG
Sbjct: 90 LGIIISPTRELSTQIYHVAQSFISTLMNVKSMLLVGGAEVKTDIKKIEEEGANILIGTPG 149
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RLYDIM RMDVLD +NLEIL+LDEADRLLDMGFQKQI+ IIS LPKLRRTGLFSATQTEA
Sbjct: 150 RLYDIMNRMDVLDLKNLEILILDEADRLLDMGFQKQITSIISLLPKLRRTGLFSATQTEA 209
Query: 121 VEELSKAGLRNP 132
+EEL+KAGLRNP
Sbjct: 210 IEELAKAGLRNP 221
>gi|414864245|tpg|DAA42802.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 406
Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 110/167 (65%), Positives = 140/167 (83%), Gaps = 1/167 (0%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+ MIISPTRELS QI++VAQPF +TL V S+ LVGG+++KA++KK+EEEGAN+L+GTPG
Sbjct: 182 LAMIISPTRELSLQIFNVAQPFFATLNGVSSMFLVGGLDIKAELKKVEEEGANILVGTPG 241
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
+L+DIM D L+++NLEIL+LDEADRLLDMGFQK I++++S LPKLRRTGLFSATQT+A
Sbjct: 242 KLFDIMH-TDALEYKNLEILILDEADRLLDMGFQKHINFVLSMLPKLRRTGLFSATQTKA 300
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVI 167
V +LSKAGLRN +RVEV+ E+KS A Q+L S TPLGL LE +
Sbjct: 301 VADLSKAGLRNLIRVEVKTEAKSTSKDAGQQELGPSITPLGLRLEYM 347
>gi|413917537|gb|AFW57469.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 338
Score = 228 bits (582), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 110/167 (65%), Positives = 140/167 (83%), Gaps = 1/167 (0%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+ +IISPTRELSSQI++VAQPF +TL V S+LLVGG+++KA++KK+EEEGAN+L+GTPG
Sbjct: 95 LALIISPTRELSSQIFNVAQPFFATLNGVPSMLLVGGLDIKAELKKVEEEGANILVGTPG 154
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
+L+DIM D L+++NLEIL+LDEADRLLDMGFQK I++I+S LPKLRRTGLFSATQT+A
Sbjct: 155 KLFDIM-HTDALEYKNLEILILDEADRLLDMGFQKHINFILSMLPKLRRTGLFSATQTKA 213
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVI 167
+ LSKAGLRN + VEV+ E+KS A Q+L S TPLGL LE +
Sbjct: 214 ITNLSKAGLRNAIMVEVKTEAKSTSKDAGQQELGPSITPLGLRLEYM 260
>gi|15217442|ref|NP_177293.1| DEAD-box ATP-dependent RNA helicase 49 [Arabidopsis thaliana]
gi|108861897|sp|Q8GXD6.2|RH49_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 49
gi|12323724|gb|AAG51820.1|AC016163_9 putative ATP-dependent RNA helicase; 76692-78838 [Arabidopsis
thaliana]
gi|332197073|gb|AEE35194.1| DEAD-box ATP-dependent RNA helicase 49 [Arabidopsis thaliana]
Length = 558
Score = 226 bits (575), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 111/148 (75%), Positives = 130/148 (87%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
MG+IISPTRELS+QI+ VA+PF+STLP+V SVLLVGG EV+AD+ +EEEGANLLIGTPG
Sbjct: 92 MGVIISPTRELSAQIHKVAEPFVSTLPNVNSVLLVGGREVEADMNTLEEEGANLLIGTPG 151
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D+M+RM+ LDFRNLEIL+LDEADRLLDMGFQKQ++YIISRLPK RRTGLFSATQT+A
Sbjct: 152 RLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTGLFSATQTQA 211
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSA 148
V +L+KAGLRN + V AESKS S
Sbjct: 212 VADLAKAGLRNAMEVISGAESKSKTSSG 239
>gi|26451630|dbj|BAC42912.1| putative ATP-dependent RNA helicase [Arabidopsis thaliana]
Length = 558
Score = 226 bits (575), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 111/148 (75%), Positives = 130/148 (87%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
MG+IISPTRELS+QI+ VA+PF+STLP+V SVLLVGG EV+AD+ +EEEGANLLIGTPG
Sbjct: 92 MGVIISPTRELSAQIHKVAEPFVSTLPNVNSVLLVGGREVEADMNTLEEEGANLLIGTPG 151
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D+M+RM+ LDFRNLEIL+LDEADRLLDMGFQKQ++YIISRLPK RRTGLFSATQT+A
Sbjct: 152 RLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTGLFSATQTQA 211
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSA 148
V +L+KAGLRN + V AESKS S
Sbjct: 212 VADLAKAGLRNAMEVISGAESKSKTSSG 239
>gi|168014437|ref|XP_001759758.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688888|gb|EDQ75262.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 631
Score = 222 bits (565), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 107/166 (64%), Positives = 136/166 (81%), Gaps = 3/166 (1%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+SPTREL+SQIYHV PF++TL V+++LLVGG +V A+V K+++ GAN+LIGTPGR
Sbjct: 86 AVIVSPTRELASQIYHVLGPFLTTLRGVQAMLLVGGTDVTAEVAKLKQTGANVLIGTPGR 145
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
LYDIMER+ LDF+NLE+L+LDEADRLLDMGFQ+Q++ I+ LPK RRTGLFSATQTEAV
Sbjct: 146 LYDIMERVTALDFKNLEVLILDEADRLLDMGFQRQLTAILGHLPKQRRTGLFSATQTEAV 205
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVI 167
EL++AGLRNPVRVEVR ++K+ S Q SKTP GL L+ +
Sbjct: 206 VELARAGLRNPVRVEVRTQAKAQAADTESFQ---SKTPSGLTLQYL 248
>gi|414585038|tpg|DAA35609.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 464
Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 107/165 (64%), Positives = 136/165 (82%), Gaps = 1/165 (0%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+ +IISPTRELSSQI++VA PF +TL V S+LLVGG+++KA++KK+EEEGAN+L+GTPG
Sbjct: 293 LALIISPTRELSSQIFNVAHPFFATLNGVSSMLLVGGLDIKAELKKVEEEGANILVGTPG 352
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
+L+DIM D L+++NLEIL+L E R LDMGFQK I++I+S LPKLRRTGLFSATQT+A
Sbjct: 353 KLFDIMH-TDALEYKNLEILILYEDYRFLDMGFQKHINFILSMLPKLRRTGLFSATQTKA 411
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLE 165
V +LSKAGLRNP+RVEV+ E+KS Q+L S TPLGL LE
Sbjct: 412 VADLSKAGLRNPIRVEVKTEAKSTSKDDGQQELGPSITPLGLRLE 456
>gi|302809384|ref|XP_002986385.1| hypothetical protein SELMODRAFT_123861 [Selaginella moellendorffii]
gi|300145921|gb|EFJ12594.1| hypothetical protein SELMODRAFT_123861 [Selaginella moellendorffii]
Length = 593
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 109/187 (58%), Positives = 137/187 (73%), Gaps = 29/187 (15%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
MIISPTREL+SQI+ VAQ F+ TL ++ ++LLVGG +V AD+++++E+G N+LIGTPGR
Sbjct: 86 AMIISPTRELASQIFGVAQKFVKTLENLTALLLVGGTDVTADLERVKEQGGNVLIGTPGR 145
Query: 62 LYDIMERMDVLDFRNLE---------------------ILVLDEADRLLDMGFQKQISYI 100
L+DIMER L+FR+LE IL+LDEADRLLDMGFQ+Q+S I
Sbjct: 146 LHDIMERSTALEFRHLEARTSDLSSLDTITSLFIVSFQILILDEADRLLDMGFQRQVSAI 205
Query: 101 ISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPL 160
I LPK RRTGLFSATQT+AVEELSKAGLRNPVRVEVR+E K AS+ + KTP
Sbjct: 206 IELLPKQRRTGLFSATQTQAVEELSKAGLRNPVRVEVRSEVK----GAST----TFKTPA 257
Query: 161 GLHLEVI 167
GL++E +
Sbjct: 258 GLNIEYL 264
>gi|302813999|ref|XP_002988684.1| hypothetical protein SELMODRAFT_128612 [Selaginella moellendorffii]
gi|300143505|gb|EFJ10195.1| hypothetical protein SELMODRAFT_128612 [Selaginella moellendorffii]
Length = 594
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 109/187 (58%), Positives = 137/187 (73%), Gaps = 29/187 (15%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
MIISPTREL+SQI+ VAQ F+ TL ++ ++LLVGG +V AD+++++E+G N+LIGTPGR
Sbjct: 88 AMIISPTRELASQIFGVAQKFVKTLENLTALLLVGGTDVTADLERVKEQGGNVLIGTPGR 147
Query: 62 LYDIMERMDVLDFRNLE---------------------ILVLDEADRLLDMGFQKQISYI 100
L+DIMER L+FR+LE IL+LDEADRLLDMGFQ+Q+S I
Sbjct: 148 LHDIMERSTALEFRHLEARTSDLSSLDTITSLFIVSFQILILDEADRLLDMGFQRQVSAI 207
Query: 101 ISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPL 160
I LPK RRTGLFSATQT+AVEELSKAGLRNPVRVEVR+E K AS+ + KTP
Sbjct: 208 IELLPKQRRTGLFSATQTQAVEELSKAGLRNPVRVEVRSEVK----GAST----TFKTPA 259
Query: 161 GLHLEVI 167
GL++E +
Sbjct: 260 GLNIEYL 266
>gi|15224011|ref|NP_177284.1| DEAD-box ATP-dependent RNA helicase 55 [Arabidopsis thaliana]
gi|75334383|sp|Q9FVV4.1|RH55_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 55
gi|12323836|gb|AAG51890.1|AC016162_11 putative DEAD/DEAH box helicase; 70712-72602 [Arabidopsis thaliana]
gi|332197062|gb|AEE35183.1| DEAD-box ATP-dependent RNA helicase 55 [Arabidopsis thaliana]
Length = 465
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 94/146 (64%), Positives = 115/146 (78%), Gaps = 9/146 (6%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
MG+IISPTRELS+QI+ VA+ + EV+AD+ +EEEGANLLIGTPG
Sbjct: 93 MGVIISPTRELSAQIHKVARAVRLDFAKCR--------EVEADMNTLEEEGANLLIGTPG 144
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D+M+RM+ LDFRNLEIL+LDEADRLLDMGFQKQ++YIISRLPK RRTGLFSATQT+A
Sbjct: 145 RLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTGLFSATQTQA 204
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHV 146
V +L+KAGLRNP ++ A+ KS +
Sbjct: 205 VADLAKAGLRNPY-LKCEADQKSSQL 229
>gi|384251385|gb|EIE24863.1| DEAD-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 588
Score = 175 bits (443), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 120/171 (70%), Gaps = 9/171 (5%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+++SPTREL+ QI+ V +PF +++P + ++LLVGG + ADV +E GA++L+GTPGR
Sbjct: 82 ALVVSPTRELARQIHTVLEPFAASVPGLTTMLLVGGSDPIADVAAFKEHGAHVLVGTPGR 141
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L+D+ ER DVLD R LE+LVLDEADRLLD G+ K + ++ RLPK RRTGLFSATQTEAV
Sbjct: 142 LHDVFERSDVLDARRLEVLVLDEADRLLDAGYGKHLEALMRRLPKQRRTGLFSATQTEAV 201
Query: 122 EELSKAGLRNPVRVEV----RAESKSHHVSASSQQLASSK-----TPLGLH 163
E L++AGLRN VRV V A + ++ ++ K TP GLH
Sbjct: 202 EALARAGLRNQVRVNVAVGPAASTSGRTAEEAAGEMKGKKTEQRVTPSGLH 252
>gi|303280952|ref|XP_003059768.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458423|gb|EEH55720.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 535
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/138 (60%), Positives = 106/138 (76%), Gaps = 1/138 (0%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKS-VLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+++SPTREL+ QI+ VA PF+ T+P +LLVGG + DV+ +++GA L+GTPGR
Sbjct: 97 VVVSPTRELAKQIFDVAAPFLRTIPRTSPPMLLVGGTDPARDVRGFDDDGACCLVGTPGR 156
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D+M R +D + +E+LVLDEADRLL MGFQK +S II RLPK RRTGLFSATQTE V
Sbjct: 157 LDDVMIRAKTMDLKRVELLVLDEADRLLSMGFQKTLSAIIGRLPKQRRTGLFSATQTEEV 216
Query: 122 EELSKAGLRNPVRVEVRA 139
EEL++AGLRNPVRV VR
Sbjct: 217 EELARAGLRNPVRVTVRC 234
>gi|255087136|ref|XP_002505491.1| predicted protein [Micromonas sp. RCC299]
gi|226520761|gb|ACO66749.1| predicted protein [Micromonas sp. RCC299]
Length = 529
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/138 (61%), Positives = 106/138 (76%), Gaps = 1/138 (0%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKS-VLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+++SPTREL+ QI+ VA PF++TLPD+ +LLVGG +V DV+ GA LIGTPG
Sbjct: 80 AVVVSPTRELARQIFDVAAPFMATLPDMAPPMLLVGGTDVNEDVRAFAAAGAAALIGTPG 139
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D+M R + D + E+LVLDEADRLL MGF + I+ II+RLPK RRTGLFSATQT+
Sbjct: 140 RLDDLMLRSNAFDAKRCELLVLDEADRLLSMGFARAINAIIARLPKQRRTGLFSATQTDE 199
Query: 121 VEELSKAGLRNPVRVEVR 138
VEEL++AGLRNPVRV VR
Sbjct: 200 VEELARAGLRNPVRVTVR 217
>gi|297839017|ref|XP_002887390.1| hypothetical protein ARALYDRAFT_895023 [Arabidopsis lyrata subsp.
lyrata]
gi|297333231|gb|EFH63649.1| hypothetical protein ARALYDRAFT_895023 [Arabidopsis lyrata subsp.
lyrata]
Length = 567
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/143 (62%), Positives = 107/143 (74%), Gaps = 23/143 (16%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+G+IISPTRELS+QI+ VAQPF+STLP+V SVLLVGG EV+AD+ IEEEGAN+LIGTPG
Sbjct: 100 IGVIISPTRELSTQIHKVAQPFVSTLPNVNSVLLVGGREVEADMNTIEEEGANILIGTPG 159
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL DIM+ + KQ++YIISRLPK RRTGLFSATQT+A
Sbjct: 160 RLSDIMKTFWI-----------------------KQVNYIISRLPKQRRTGLFSATQTQA 196
Query: 121 VEELSKAGLRNPVRVEVRAESKS 143
VEEL+KAGLRN +V +RAESK+
Sbjct: 197 VEELAKAGLRNAEKVILRAESKT 219
>gi|302854479|ref|XP_002958747.1| hypothetical protein VOLCADRAFT_108284 [Volvox carteri f.
nagariensis]
gi|300255922|gb|EFJ40203.1| hypothetical protein VOLCADRAFT_108284 [Volvox carteri f.
nagariensis]
Length = 1517
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 78/131 (59%), Positives = 105/131 (80%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QIY VA P I+++P + S+LLVGG + DV + GA++L+GTPGR
Sbjct: 246 AIIISPTRELAKQIYGVAGPLIASVPGLTSMLLVGGTDPAQDVAAFKSRGAHVLVGTPGR 305
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ DI++R +D + LE+LVLDEADRLLD+GF+ Q+ ++SRLP+ RRTGLFSATQTEAV
Sbjct: 306 IDDIVKRCTAMDLKRLEVLVLDEADRLLDLGFRAQLDSVMSRLPRQRRTGLFSATQTEAV 365
Query: 122 EELSKAGLRNP 132
+EL++AGLRNP
Sbjct: 366 QELARAGLRNP 376
>gi|440797143|gb|ELR18238.1| DEAD/DEAH box helicase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 697
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 121/168 (72%), Gaps = 14/168 (8%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTL---PDVKSVLL---VGGVEVKADVKKIEEEGANLL 55
+II+PTREL+SQI +A+ FI L P +S L +GGVE+ D++K + EG +++
Sbjct: 123 ALIITPTRELASQITEIAKVFIENLKGTPGKQSFTLQVFIGGVELSHDMRKFQAEGGHVI 182
Query: 56 IGTPGRLYDIMERMD-VLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFS 114
IGTPGRL DI+ +MD V + R+LE+LVLDEADRLL+MGF+ QI+ I++RLPK RRTGLFS
Sbjct: 183 IGTPGRLEDIINKMDHVFNTRSLEVLVLDEADRLLEMGFRPQINTILNRLPKQRRTGLFS 242
Query: 115 ATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGL 162
ATQT+ VE L++AGLRNP+RV V+ +K Q+ + K PL L
Sbjct: 243 ATQTQEVEHLARAGLRNPLRVGVKVRTK-------GAQVKNQKIPLTL 283
>gi|159474678|ref|XP_001695452.1| predicted protein [Chlamydomonas reinhardtii]
gi|158275935|gb|EDP01710.1| predicted protein [Chlamydomonas reinhardtii]
Length = 581
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/134 (58%), Positives = 103/134 (76%), Gaps = 1/134 (0%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ QIY VA+PFI+++ + S+LLVGG + DV + G ++L+GTPGR+
Sbjct: 85 IIISPTRELAKQIYGVAEPFIASVRGLTSMLLVGGTDPAQDVSAFKARGGHVLVGTPGRI 144
Query: 63 YDIMERMDVLDFRN-LEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
D+ + RN + +LVLDEADRLLDMGF+ Q+ ++ RLPK RRTGLFSATQTEAV
Sbjct: 145 EDMGRGVGGCGMRNGVAVLVLDEADRLLDMGFKAQLDAVMGRLPKQRRTGLFSATQTEAV 204
Query: 122 EELSKAGLRNPVRV 135
+EL++AGLRNPVRV
Sbjct: 205 QELARAGLRNPVRV 218
>gi|410903956|ref|XP_003965459.1| PREDICTED: ATP-dependent RNA helicase DDX55-like [Takifugu
rubripes]
Length = 597
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/187 (47%), Positives = 120/187 (64%), Gaps = 15/187 (8%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++I+PTREL+ QI V Q FI P +LL+GG DV+K +++GAN++I TPGR
Sbjct: 85 ALVITPTRELALQISEVMQQFIQRFPQFTQILLIGGSNPIEDVEKFKDQGANIVIATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ +R D LD ++LE+LVLDEADRLLDMGF+ ++ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFKRKADGLDLACLVKSLEVLVLDEADRLLDMGFEASLNAILGHLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ +E+L +AGLRNPVR+ V K V+AS A+ KTP L + + + N
Sbjct: 205 QTQELEKLVRAGLRNPVRIAV----KEKGVAAS----ATQKTP--SRLSNYYTICRSENK 254
Query: 177 HNLLICL 183
N L+
Sbjct: 255 FNNLVAF 261
>gi|145356683|ref|XP_001422556.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582799|gb|ABP00873.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 583
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/147 (55%), Positives = 101/147 (68%), Gaps = 10/147 (6%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKS----------VLLVGGVEVKADVKKIEEEG 51
+I+SPTREL+ QI+ VA PF+ TL +S +LLVGG +V DV
Sbjct: 77 AVIVSPTRELAKQIHEVAAPFVRTLGKERSETNEGEGDLAMLLVGGTDVAKDVATFAATS 136
Query: 52 ANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTG 111
+LI TPGRL+D+M+R LD + E+L+LDEADRLL MGF ++ IISRLPK RRTG
Sbjct: 137 PLVLIATPGRLWDVMQRSKELDGKKCELLILDEADRLLGMGFMATLNNIISRLPKQRRTG 196
Query: 112 LFSATQTEAVEELSKAGLRNPVRVEVR 138
LFSATQTE V EL++AGLRNPVRV VR
Sbjct: 197 LFSATQTEEVAELARAGLRNPVRVTVR 223
>gi|156384956|ref|XP_001633398.1| predicted protein [Nematostella vectensis]
gi|156220467|gb|EDO41335.1| predicted protein [Nematostella vectensis]
Length = 583
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 112/158 (70%), Gaps = 6/158 (3%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V + +P+++ +LL+GG + AD+K + EGAN++IGTPGR
Sbjct: 81 ALIITPTRELAQQIDEVVSTLVEDIPNIRRLLLIGGADPNADLKAFKYEGANIIIGTPGR 140
Query: 62 LYDIMERM-DVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D + R D ++ ++LE+LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 141 LEDFLARQQDGINLASHLKSLEVLVLDEADRLLDMGFEASINTILGYLPKQRRTGLFSAT 200
Query: 117 QTEAVEELSKAGLRNPVRVEVRAE-SKSHHVSASSQQL 153
QT+ VE L +AGLRNPVRV VR + +K+ +V + L
Sbjct: 201 QTDEVEALVRAGLRNPVRVTVREKLTKTKNVQRTPSTL 238
>gi|260820656|ref|XP_002605650.1| hypothetical protein BRAFLDRAFT_232791 [Branchiostoma floridae]
gi|229290985|gb|EEN61660.1| hypothetical protein BRAFLDRAFT_232791 [Branchiostoma floridae]
Length = 449
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 121/181 (66%), Gaps = 14/181 (7%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F LP + +LL+GG AD+KK +E GAN+++ TPGR
Sbjct: 81 ALIITPTRELALQIDEVISAFTKRLPQLSQLLLIGGGNPVADIKKYQENGANIIVCTPGR 140
Query: 62 LYDIMERM-DVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L DI+ R D L+ ++LE+LVLDEADRLLDMGF+ I+ I+S LPK RRTGLFSAT
Sbjct: 141 LEDILRRKEDGLNLAGHLKSLEVLVLDEADRLLDMGFEMSINTILSYLPKQRRTGLFSAT 200
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGL-HLEVIWNVNQMRN 175
QT+ VE L +AGLRNPVR+ V K +V+ + QQ +TP L +L ++ ++ N
Sbjct: 201 QTKEVEALVRAGLRNPVRITV----KEKNVAENVQQ----RTPASLDNLYMMCRSDEKFN 252
Query: 176 H 176
H
Sbjct: 253 H 253
>gi|346473309|gb|AEO36499.1| hypothetical protein [Amblyomma maculatum]
Length = 499
Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 78/142 (54%), Positives = 101/142 (71%), Gaps = 5/142 (3%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++ISPTREL++QIY V F+ +P LL GG DVK +E GAN+++ TPGR
Sbjct: 86 AIVISPTRELATQIYSVLNHFLQFVPQFTGQLLTGGYNPINDVKAFKENGANIIVATPGR 145
Query: 62 LYDIMERMD-----VLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
+ D++ER D ++LE+LVLDEADRLLDMGF+K I+ I+S LPK RRTGLFSAT
Sbjct: 146 MVDMLERKDENFSFAACVKHLEVLVLDEADRLLDMGFEKSINTILSFLPKQRRTGLFSAT 205
Query: 117 QTEAVEELSKAGLRNPVRVEVR 138
QT+ VE+L +AGLRNPV V V+
Sbjct: 206 QTKEVEDLIRAGLRNPVSVTVK 227
>gi|260820614|ref|XP_002605629.1| hypothetical protein BRAFLDRAFT_283402 [Branchiostoma floridae]
gi|229290964|gb|EEN61639.1| hypothetical protein BRAFLDRAFT_283402 [Branchiostoma floridae]
Length = 591
Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 121/181 (66%), Gaps = 14/181 (7%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F LP + +LL+GG AD+KK +E GAN+++ TPGR
Sbjct: 81 ALIITPTRELALQIDEVISAFTKRLPQLSQLLLIGGGNPVADIKKYQENGANIIVCTPGR 140
Query: 62 LYDIMERM-DVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L DI+ R D L+ ++LE+LVLDEADRLLDMGF+ I+ I+S LPK RRTGLFSAT
Sbjct: 141 LEDILRRKEDGLNLAGHLKSLEVLVLDEADRLLDMGFEMSINTILSYLPKQRRTGLFSAT 200
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGL-HLEVIWNVNQMRN 175
QT+ VE L +AGLRNPVR+ V K +V+ + QQ +TP L +L ++ ++ N
Sbjct: 201 QTKEVEALVRAGLRNPVRITV----KEKNVAENVQQ----RTPASLDNLYMMCRSDEKFN 252
Query: 176 H 176
H
Sbjct: 253 H 253
>gi|412985531|emb|CCO18977.1| predicted protein [Bathycoccus prasinos]
Length = 780
Score = 155 bits (391), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 91/197 (46%), Positives = 117/197 (59%), Gaps = 34/197 (17%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTL------------------PDVKSVLLVGG--VEVK 41
+I+SPTREL+ QI VA+PF+ +L PDVK +LLVGG V
Sbjct: 95 AVIVSPTRELARQIRDVAEPFLESLRAIADEEDEESKEHSKFNPDVKPMLLVGGGAQTVA 154
Query: 42 ADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYII 101
D+K+ E G+ LIGTPGR+ D++ + LD + E+LVLDEADR+L MGF K ++ II
Sbjct: 155 DDLKRFSERGSLCLIGTPGRMLDVLTKARDLDAKRCELLVLDEADRVLGMGFAKTLNSII 214
Query: 102 SRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVR--------------AESKSHHVS 147
LPK RRTGLFSATQTE +EEL++AGLRNPVRV VR E+K+
Sbjct: 215 GMLPKQRRTGLFSATQTEELEELARAGLRNPVRVTVRDSNAAAAAAAAGGGKENKTDKKK 274
Query: 148 ASSQQLASSKTPLGLHL 164
+ A SK P+ L L
Sbjct: 275 GAIGAGAGSKLPMQLEL 291
>gi|348535433|ref|XP_003455205.1| PREDICTED: ATP-dependent RNA helicase DDX55-like [Oreochromis
niloticus]
Length = 590
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/159 (49%), Positives = 111/159 (69%), Gaps = 7/159 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++I+PTREL+ QI V + FI P K +LL+GG DV+K +++GAN++I TPGR
Sbjct: 85 ALVITPTRELAVQISEVMEQFIEKFPQFKQILLIGGSNPAEDVEKFKDKGANIVIATPGR 144
Query: 62 LYDIMERM-DVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R D LD ++L++LVLDEADRLLDMGF+ ++ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKSDGLDLASSVKSLDVLVLDEADRLLDMGFEASLNTILGYLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLAS 155
QT+ +E+L +AGLRNPVR+ V+ K +A++Q+ S
Sbjct: 205 QTQELEKLVRAGLRNPVRITVK--EKGLAAAATAQKTPS 241
>gi|198285443|gb|ACH85260.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Salmo salar]
Length = 606
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/166 (51%), Positives = 110/166 (66%), Gaps = 13/166 (7%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I++PTREL+ QI V F+ P + +LL+GG DV+K +E+GAN+LI TPGR
Sbjct: 84 ALIVTPTRELALQISEVMGQFLQKFPQFRQILLIGGSNPIEDVEKFKEQGANILIATPGR 143
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R D LD + LE+LVLDEADRLLDMGF+ ++ I+ LPK RRTGLFSAT
Sbjct: 144 LEDMFRRKADGLDLALSVKFLEVLVLDEADRLLDMGFEASLNVILGYLPKQRRTGLFSAT 203
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGL 162
QT+ +E+L +AGLRNPVR+ V K V+AS Q KTP L
Sbjct: 204 QTQELEKLVRAGLRNPVRITV----KEKGVAASCTQ----KTPARL 241
>gi|196012088|ref|XP_002115907.1| hypothetical protein TRIADDRAFT_30218 [Trichoplax adhaerens]
gi|190581683|gb|EDV21759.1| hypothetical protein TRIADDRAFT_30218 [Trichoplax adhaerens]
Length = 504
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/167 (47%), Positives = 109/167 (65%), Gaps = 15/167 (8%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I++PTREL+ QI+ V QPF+ + D+ +L +GG D K +E G N++I TPGR
Sbjct: 86 AIILTPTRELAIQIHTVIQPFLDNMQDLSQILFIGGNNTVNDAKMWKEYGGNIIIATPGR 145
Query: 62 LYDIMERMDVLDF------RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
DI++R DF + LE+LVLDEADRLLD+GF++ ++ I S LPK RRTGLFSA
Sbjct: 146 FEDIIDRRKT-DFNIAGHIKALEVLVLDEADRLLDLGFEESLNTIFSYLPKQRRTGLFSA 204
Query: 116 TQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGL 162
TQTE +E+L +AGLRNPVR+ VR ++ V + KTP L
Sbjct: 205 TQTEKLEQLIRAGLRNPVRITVREKNIVKQV--------NQKTPAAL 243
>gi|308811396|ref|XP_003083006.1| DEAD/DEAH box helicase, putative (ISS) [Ostreococcus tauri]
gi|116054884|emb|CAL56961.1| DEAD/DEAH box helicase, putative (ISS) [Ostreococcus tauri]
Length = 686
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/146 (53%), Positives = 100/146 (68%), Gaps = 9/146 (6%)
Query: 2 GMIISPTRELSSQIYHVAQPFI---------STLPDVKSVLLVGGVEVKADVKKIEEEGA 52
+++SPTREL+ QI+ VA PF+ S + ++LLVGG +V DV
Sbjct: 135 AVVVSPTRELARQIHAVATPFVEAMLRERGESGVEGRATMLLVGGTDVSKDVGAFAAMSP 194
Query: 53 NLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGL 112
+L+ TPGRL+D+M+R LD + E+L+LDEADRLL MGF ++ IISRLPK RRTGL
Sbjct: 195 LVLVATPGRLWDVMQRSKELDAKKCELLILDEADRLLGMGFMTTLNNIISRLPKQRRTGL 254
Query: 113 FSATQTEAVEELSKAGLRNPVRVEVR 138
FSATQTE V EL++AGLRNPVRV VR
Sbjct: 255 FSATQTEEVAELARAGLRNPVRVTVR 280
>gi|47228487|emb|CAG05307.1| unnamed protein product [Tetraodon nigroviridis]
Length = 493
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/163 (49%), Positives = 111/163 (68%), Gaps = 13/163 (7%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++I+PTREL+ QI V + F+ P +LL+GG DV+K +++GAN++I TPGR
Sbjct: 228 ALVITPTRELALQISQVMEQFLQRFPQFTQILLIGGSNPIEDVEKFKDQGANIVIATPGR 287
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ +R D LD ++LE+LVLDEADRLLDMGF+ ++ I+ LPK RRTGLFSAT
Sbjct: 288 LEDMFKRKADGLDLACWVKSLEVLVLDEADRLLDMGFEASLNAILGHLPKQRRTGLFSAT 347
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTP 159
QT+ +E+L +AGLRNPVR+ V K +AS+ Q KTP
Sbjct: 348 QTQELEKLVRAGLRNPVRITV----KEKGAAASAVQ----KTP 382
>gi|37589691|gb|AAH59534.1| Ddx55 protein, partial [Danio rerio]
Length = 493
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/166 (50%), Positives = 111/166 (66%), Gaps = 13/166 (7%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F+ P +LL+GG DV+K++ +GAN++I TPGR
Sbjct: 85 ALIITPTRELAMQISEVMGRFLQGFPQFTQILLIGGSNPIEDVEKLKTQGANIIIATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R D LD ++L++LVLDEADRLLDMGF+ ++ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKADGLDLATAVKSLDVLVLDEADRLLDMGFEASLNTILGYLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGL 162
QT+ +E+L +AGLRNPVR+ V K V+ASS Q KTP L
Sbjct: 205 QTQELEKLVRAGLRNPVRITV----KEKGVAASSVQ----KTPAKL 242
>gi|47228482|emb|CAG05302.1| unnamed protein product [Tetraodon nigroviridis]
Length = 599
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/163 (49%), Positives = 111/163 (68%), Gaps = 13/163 (7%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++I+PTREL+ QI V + F+ P +LL+GG DV+K +++GAN++I TPGR
Sbjct: 85 ALVITPTRELALQISQVMEQFLQRFPQFTQILLIGGSNPIEDVEKFKDQGANIVIATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ +R D LD ++LE+LVLDEADRLLDMGF+ ++ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFKRKADGLDLACWVKSLEVLVLDEADRLLDMGFEASLNAILGHLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTP 159
QT+ +E+L +AGLRNPVR+ V K +AS+ Q KTP
Sbjct: 205 QTQELEKLVRAGLRNPVRITV----KEKGAAASAVQ----KTP 239
>gi|146345411|sp|Q8JHJ2.2|DDX55_DANRE RecName: Full=ATP-dependent RNA helicase DDX55; AltName: Full=DEAD
box protein 55
Length = 593
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/166 (50%), Positives = 111/166 (66%), Gaps = 13/166 (7%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F+ P +LL+GG DV+K++ +GAN++I TPGR
Sbjct: 85 ALIITPTRELAMQISEVMGRFLQGFPQFTQILLIGGSNPIEDVEKLKTQGANIIIATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R D LD ++L++LVLDEADRLLDMGF+ ++ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKADGLDLATAVKSLDVLVLDEADRLLDMGFEASLNTILGYLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGL 162
QT+ +E+L +AGLRNPVR+ V K V+ASS Q KTP L
Sbjct: 205 QTQELEKLVRAGLRNPVRITV----KEKGVAASSVQ----KTPAKL 242
>gi|27545209|ref|NP_775336.1| ATP-dependent RNA helicase DDX55 [Danio rerio]
gi|21105407|gb|AAM34647.1|AF506203_1 ATP-dependent RNA helicase [Danio rerio]
Length = 593
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/166 (50%), Positives = 111/166 (66%), Gaps = 13/166 (7%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F+ P +LL+GG DV+K++ +GAN++I TPGR
Sbjct: 85 ALIITPTRELAMQISEVMGRFLQGFPQFTQILLIGGSNPIEDVEKLKTQGANIIIATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R D LD ++L++LVLDEADRLLDMGF+ ++ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKADGLDLATAVKSLDVLVLDEADRLLDMGFEASLNTILGYLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGL 162
QT+ +E+L +AGLRNPVR+ V K V+ASS Q KTP L
Sbjct: 205 QTQELEKLVRAGLRNPVRITV----KEKGVAASSVQ----KTPAKL 242
>gi|328871810|gb|EGG20180.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 1288
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/150 (47%), Positives = 110/150 (73%), Gaps = 2/150 (1%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+ +I++PTREL+ QI+ + + F+ L +K +LL+GG EV DV+K ++G N+++ TPG
Sbjct: 645 LAVIVTPTRELAVQIFGILEQFVHGLDHIKRLLLIGGTEVYEDVQKFNKDGGNVIVATPG 704
Query: 61 RLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTE 119
RL D++ R++ + + E+L+LDEADRLLDMGF ++ ++ RLPK RRTGLFSATQT
Sbjct: 705 RLEDVLSRVERNMKLKEFEMLILDEADRLLDMGFDTALNAVLDRLPKQRRTGLFSATQTT 764
Query: 120 AVEELSKAGLRNPVRVEVRAESK-SHHVSA 148
++EL++ G+RNPV+V V + K ++ VSA
Sbjct: 765 ELKELARMGMRNPVKVSVAVQQKGTNQVSA 794
>gi|147899081|ref|NP_001086608.1| ATP-dependent RNA helicase DDX55 [Xenopus laevis]
gi|82199952|sp|Q6AZV7.1|DDX55_XENLA RecName: Full=ATP-dependent RNA helicase DDX55; AltName: Full=DEAD
box protein 55
gi|50603912|gb|AAH77172.1| Ddx55-prov protein [Xenopus laevis]
Length = 594
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/167 (49%), Positives = 107/167 (64%), Gaps = 13/167 (7%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P +LL+GG DV+K +E G N+++ TPGR
Sbjct: 85 ALIITPTRELAVQIDEVLSCFTKHFPQFSQILLIGGSNPVDDVRKFKEHGGNIIVATPGR 144
Query: 62 LYDIMERM-DVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R D LD + L++L+LDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRQADGLDLVICVKTLDVLILDEADRLLDMGFEASINTILGFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLH 163
QT+ +E L +AGLRNPVR+ V K V+A+S Q KTP+ L
Sbjct: 205 QTQELENLVRAGLRNPVRIAV----KEKGVAATSTQ----KTPIRLQ 243
>gi|328708081|ref|XP_001949864.2| PREDICTED: probable ATP-dependent RNA helicase DDX55 homolog
[Acyrthosiphon pisum]
Length = 608
Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 79/168 (47%), Positives = 112/168 (66%), Gaps = 10/168 (5%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G+IISPTREL++Q HV F+ + V +L +GG ++ DVK + GAN+L+ TPGR
Sbjct: 85 GLIISPTRELATQTSHVLAEFLKNIEGVTQMLTLGGSPIETDVKAFNKNGANILVATPGR 144
Query: 62 LYDIMERMDVLDF------RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
L D++ R + +F ++LE+LVLDEAD+LL++GF+K I+ ++ LP RRTGLFSA
Sbjct: 145 LEDLLTR-KIPNFHLHKSLKSLEMLVLDEADKLLELGFEKSINTVLQYLPTQRRTGLFSA 203
Query: 116 TQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLH 163
TQT+ V L KAGLRNP+ V V+ + H ++ S Q+ S TPL L
Sbjct: 204 TQTKQVAMLVKAGLRNPIMVIVK---EKHCLNPKSNQIESISTPLALQ 248
>gi|300122648|emb|CBK23215.2| unnamed protein product [Blastocystis hominis]
Length = 624
Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 85/173 (49%), Positives = 113/173 (65%), Gaps = 10/173 (5%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G+IISPTREL+ Q Y VAQ FI + VLL GG++ DVK++ + +LI TPGR
Sbjct: 83 GVIISPTRELAMQTYSVAQRFIEKCDKMHLVLLTGGIQ--DDVKQLSNDKGLILIATPGR 140
Query: 62 LYDIMERMD-VLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
L DIMER L FR LE+L+LDEAD LLD+G I++I+S+LPK RRTGLFSAT+ +
Sbjct: 141 LKDIMERQQGKLSFRELEVLILDEADVLLDLGHAATINFILSKLPKQRRTGLFSATEADG 200
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQLAS------SKTPLGLHLEVI 167
V L KAGLRNP++V++ +++ + + A QL + S T LG L I
Sbjct: 201 VSALCKAGLRNPIKVKIEIKNR-NQIQAVPVQLKNYYTILPSDTKLGFLLRFI 252
>gi|397481832|ref|XP_003812141.1| PREDICTED: ATP-dependent RNA helicase DDX55 [Pan paniscus]
Length = 600
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/185 (47%), Positives = 115/185 (62%), Gaps = 15/185 (8%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P+ +L +GG DV+K +++G N+++ TPGR
Sbjct: 85 AIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVEKFKQQGGNIIVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD R+L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVRV V K V+ASS Q KTP LE + V +
Sbjct: 205 QTQEVENLVRAGLRNPVRVSV----KEKGVAASSAQ----KTP--SRLENYYMVCKADEK 254
Query: 177 HNLLI 181
N L+
Sbjct: 255 FNQLV 259
>gi|432954527|ref|XP_004085521.1| PREDICTED: ATP-dependent RNA helicase DDX55-like, partial [Oryzias
latipes]
Length = 248
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 109/159 (68%), Gaps = 7/159 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++I+PTREL+ QI V + F+ P+ +LLVGG DV ++++ G N++I TPGR
Sbjct: 85 ALVITPTRELALQISEVMETFLRRFPEFTQILLVGGSNPAEDVDRLKDRGGNIVIATPGR 144
Query: 62 LYDIMERM-DVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD R+L++LVLDEADRLLDMGF+ ++ I+S LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKSEGLDLASAVRSLDVLVLDEADRLLDMGFESSLNTILSFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLAS 155
QT+ +E+L +AGLRNPVR+ V+ K +A +Q+ S
Sbjct: 205 QTQELEKLVRAGLRNPVRITVK--EKGLAAAAPAQKTPS 241
>gi|114647685|ref|XP_001170267.1| PREDICTED: ATP-dependent RNA helicase DDX55 isoform 8 [Pan
troglodytes]
gi|410214454|gb|JAA04446.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Pan troglodytes]
gi|410214456|gb|JAA04447.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Pan troglodytes]
gi|410214458|gb|JAA04448.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Pan troglodytes]
gi|410252672|gb|JAA14303.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Pan troglodytes]
gi|410252674|gb|JAA14304.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Pan troglodytes]
gi|410306148|gb|JAA31674.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Pan troglodytes]
gi|410330307|gb|JAA34100.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Pan troglodytes]
gi|410330309|gb|JAA34101.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Pan troglodytes]
Length = 600
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/185 (47%), Positives = 115/185 (62%), Gaps = 15/185 (8%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P+ +L +GG DV+K +++G N+++ TPGR
Sbjct: 85 AIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVEKFKQQGGNIIVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD R+L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVRV V K V+ASS Q KTP LE + V +
Sbjct: 205 QTQEVENLVRAGLRNPVRVSV----KEKGVAASSAQ----KTP--SRLENYYMVCKADEK 254
Query: 177 HNLLI 181
N L+
Sbjct: 255 FNQLV 259
>gi|444724895|gb|ELW65481.1| ATP-dependent RNA helicase DDX55 [Tupaia chinensis]
Length = 877
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/185 (46%), Positives = 115/185 (62%), Gaps = 15/185 (8%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++I+PTREL+ QI V F P + +L +GG DV+K +++G N+++ TPGR
Sbjct: 362 AVVITPTRELAIQIDEVLSHFTKHFPQLSQILWIGGRNPGEDVEKFKQQGGNIIVATPGR 421
Query: 62 LYDIMER----MDVLD-FRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R +D+ R+LE+LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 422 LEDMFRRKAEGVDLASCMRSLEVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 481
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVR+ V K V+ASS Q KTP LE + V +
Sbjct: 482 QTQEVENLVRAGLRNPVRISV----KEKGVAASSTQ----KTP--SRLENFYMVCKADEK 531
Query: 177 HNLLI 181
N L+
Sbjct: 532 FNQLV 536
>gi|73994422|ref|XP_543371.2| PREDICTED: ATP-dependent RNA helicase DDX55 isoform 1 [Canis lupus
familiaris]
Length = 599
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/185 (46%), Positives = 115/185 (62%), Gaps = 15/185 (8%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ Q+ V F + P +L +GG DV + +E+G N+++ TPGR
Sbjct: 85 AIIITPTRELAIQVDEVLAHFTKSFPQFSQILWIGGRNPADDVSRFKEQGGNIIVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R ++ LD ++LE+LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKVEGLDLASCVKSLEVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVR+ V K V+ASS Q KTP LE + V +
Sbjct: 205 QTQEVESLVRAGLRNPVRISV----KEKGVAASSTQ----KTP--SRLENYYMVCKADEK 254
Query: 177 HNLLI 181
N L+
Sbjct: 255 FNQLV 259
>gi|301754659|ref|XP_002913145.1| PREDICTED: ATP-dependent RNA helicase DDX55-like [Ailuropoda
melanoleuca]
gi|281343809|gb|EFB19393.1| hypothetical protein PANDA_000939 [Ailuropoda melanoleuca]
Length = 600
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/185 (47%), Positives = 114/185 (61%), Gaps = 15/185 (8%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F+ P +L +GG DV + +E+G N+++ TPGR
Sbjct: 85 AIIITPTRELAIQIDEVLAHFMKPFPQFSQILWIGGRNPGEDVARFKEQGGNIIVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD R+L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVR+ V K V+ASS Q KTP LE + V +
Sbjct: 205 QTQEVESLVRAGLRNPVRISV----KEKGVAASSTQ----KTP--SRLENYYMVCKADEK 254
Query: 177 HNLLI 181
N L+
Sbjct: 255 FNQLV 259
>gi|57525164|ref|NP_001006185.1| ATP-dependent RNA helicase DDX55 [Gallus gallus]
gi|82197869|sp|Q5ZLN8.1|DDX55_CHICK RecName: Full=ATP-dependent RNA helicase DDX55; AltName: Full=DEAD
box protein 55
gi|53129029|emb|CAG31355.1| hypothetical protein RCJMB04_5g4 [Gallus gallus]
Length = 591
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/185 (45%), Positives = 115/185 (62%), Gaps = 15/185 (8%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P +LL+GG DV+K +E G N+++ TPGR
Sbjct: 85 AIIITPTRELAIQIDEVLTHFTKHFPKFSQILLIGGRNPMEDVEKFKEHGGNIIVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R D LD ++L++LVLDEADRLLDMGF+ ++ I++ LPK RRTGLFSAT
Sbjct: 145 LEDLFRRKADGLDLASCVKSLDVLVLDEADRLLDMGFESSLNAILAFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVR+ V K V+A++ Q KTP LE + + +
Sbjct: 205 QTQEVENLVRAGLRNPVRISV----KEKGVAATNTQ----KTP--TRLENYYMICKADEK 254
Query: 177 HNLLI 181
N L+
Sbjct: 255 FNQLV 259
>gi|449279310|gb|EMC86945.1| ATP-dependent RNA helicase DDX55 [Columba livia]
Length = 597
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/185 (46%), Positives = 114/185 (61%), Gaps = 15/185 (8%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P +LL+GG DV+K +E G N+++ TPGR
Sbjct: 85 AIIITPTRELAIQIDEVLSHFTKHFPRFSQILLIGGRNPMEDVEKFKEHGGNIIVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R D LD ++L++LVLDEADRLLDMGF+ ++ I+ LPK RRTGLFSAT
Sbjct: 145 LEDLFRRKADGLDLASCVKSLDVLVLDEADRLLDMGFEASLNTILDFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVR+ V K V+AS+ Q KTP LE + + +
Sbjct: 205 QTQEVENLVRAGLRNPVRISV----KEKGVAASNAQ----KTP--TRLENYYMICKADEK 254
Query: 177 HNLLI 181
N L+
Sbjct: 255 FNQLV 259
>gi|410976502|ref|XP_003994659.1| PREDICTED: ATP-dependent RNA helicase DDX55 [Felis catus]
Length = 600
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 105/161 (65%), Gaps = 9/161 (5%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P +L +GG DV++ +E+G N+++ TPGR
Sbjct: 85 ALIITPTRELAIQIDEVLAHFTRPFPQFSQILWIGGRNPGEDVERFKEQGGNIIVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD R+L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSK 157
QT+ VE L +AGLRNPVR+ V K V+ASS Q S+
Sbjct: 205 QTQEVESLVRAGLRNPVRISV----KEKGVAASSTQKTPSR 241
>gi|326929609|ref|XP_003210951.1| PREDICTED: ATP-dependent RNA helicase DDX55-like [Meleagris
gallopavo]
Length = 579
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/185 (45%), Positives = 115/185 (62%), Gaps = 15/185 (8%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P +LL+GG DV+K +E G N+++ TPGR
Sbjct: 70 AIIITPTRELAIQIDEVLTHFTKHFPRFSQILLIGGRNPMEDVEKFKEHGGNIIVATPGR 129
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R D LD ++L++LVLDEADRLLDMGF+ ++ I++ LPK RRTGLFSAT
Sbjct: 130 LEDLFRRKADGLDLASCVKSLDVLVLDEADRLLDMGFESSLNAILAFLPKQRRTGLFSAT 189
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVR+ V K V+A++ Q KTP LE + + +
Sbjct: 190 QTQEVENLVRAGLRNPVRISV----KEKGVAATNTQ----KTP--TRLENYYMICKADEK 239
Query: 177 HNLLI 181
N L+
Sbjct: 240 FNQLV 244
>gi|20987604|gb|AAH30020.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Homo sapiens]
Length = 600
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/185 (47%), Positives = 115/185 (62%), Gaps = 15/185 (8%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P+ +L +GG DV++ +++G N+++ TPGR
Sbjct: 85 AIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQGGNIIVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD R+L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDLFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVRV V K V+ASS Q KTP LE + V +
Sbjct: 205 QTQEVENLVRAGLRNPVRVSV----KEKGVAASSAQ----KTP--SRLENYYMVCKADEK 254
Query: 177 HNLLI 181
N L+
Sbjct: 255 FNQLV 259
>gi|345323103|ref|XP_001507486.2| PREDICTED: ATP-dependent RNA helicase DDX55-like [Ornithorhynchus
anatinus]
Length = 1090
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/184 (47%), Positives = 115/184 (62%), Gaps = 15/184 (8%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+II+PTREL+ QI V F P +LL+GG DV+K +E+G N+++ TPGRL
Sbjct: 196 IIITPTRELAIQIDEVLLHFSKHFPQFSQILLIGGRNPSEDVEKFKEQGGNIIVATPGRL 255
Query: 63 YDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQ 117
D+ R + LD ++L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSATQ
Sbjct: 256 EDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSATQ 315
Query: 118 TEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNHH 177
T+ VE L +AGLRNPVR+ V K V+ASS Q KTP LE + V +
Sbjct: 316 TQEVENLVRAGLRNPVRISV----KEKGVAASSTQ----KTP--SRLENYYMVCKADEKF 365
Query: 178 NLLI 181
N L+
Sbjct: 366 NQLV 369
>gi|41327779|ref|NP_065987.1| ATP-dependent RNA helicase DDX55 [Homo sapiens]
gi|296439376|sp|Q8NHQ9.3|DDX55_HUMAN RecName: Full=ATP-dependent RNA helicase DDX55; AltName: Full=DEAD
box protein 55
gi|119618827|gb|EAW98421.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55, isoform CRA_c [Homo
sapiens]
gi|119618828|gb|EAW98422.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55, isoform CRA_c [Homo
sapiens]
Length = 600
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/185 (47%), Positives = 115/185 (62%), Gaps = 15/185 (8%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P+ +L +GG DV++ +++G N+++ TPGR
Sbjct: 85 AIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQGGNIIVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD R+L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVRV V K V+ASS Q KTP LE + V +
Sbjct: 205 QTQEVENLVRAGLRNPVRVSV----KEKGVAASSAQ----KTP--SRLENYYMVCKADEK 254
Query: 177 HNLLI 181
N L+
Sbjct: 255 FNQLV 259
>gi|440898317|gb|ELR49842.1| ATP-dependent RNA helicase DDX55, partial [Bos grunniens mutus]
Length = 613
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/186 (46%), Positives = 113/186 (60%), Gaps = 26/186 (13%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P +L +GG DV + +E G N+++ TPGR
Sbjct: 97 AIIITPTRELAVQIEEVLSHFTKPFPQFSQILWIGGRNPGEDVARFKELGGNIIVATPGR 156
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD R+LE+LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 157 LEDMFRRKAEGLDLASCVRSLEVLVLDEADRLLDMGFETSINTILEFLPKQRRTGLFSAT 216
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVR+ V K V+ASS Q KTP +++ NH
Sbjct: 217 QTQEVENLVRAGLRNPVRISV----KEKGVAASSTQ----KTP-----------SRLENH 257
Query: 177 HNLLIC 182
+ ++C
Sbjct: 258 Y--MVC 261
>gi|332254329|ref|XP_003276279.1| PREDICTED: ATP-dependent RNA helicase DDX55 [Nomascus leucogenys]
Length = 599
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/185 (47%), Positives = 115/185 (62%), Gaps = 15/185 (8%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P+ +L +GG DV++ +++G N+++ TPGR
Sbjct: 85 AIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQGGNIIVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD R+L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVRV V K V+ASS Q KTP LE + V +
Sbjct: 205 QTQEVENLVRAGLRNPVRVSV----KEKGVAASSAQ----KTP--SRLENYYMVCKADEK 254
Query: 177 HNLLI 181
N L+
Sbjct: 255 FNQLV 259
>gi|380026327|ref|XP_003696903.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX55-like [Apis florea]
Length = 587
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/141 (50%), Positives = 103/141 (73%), Gaps = 5/141 (3%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G+IISPTREL+ QI V Q F++ +P++K +LLVGG + D +++ GAN+++ TPGR
Sbjct: 80 GIIISPTRELAVQINEVLQKFLNNIPNLKQILLVGGTTIAEDADRLKA-GANIIVATPGR 138
Query: 62 LYDIMERMDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQ 117
L DI+ +++ ++LEIL+LDEADRLLD+GF + I S LP+LRRTGLFSATQ
Sbjct: 139 LEDILSNCKIINLAAYIKSLEILILDEADRLLDLGFSTALDTIXSYLPRLRRTGLFSATQ 198
Query: 118 TEAVEELSKAGLRNPVRVEVR 138
T+ +++L +AGLRNP + V+
Sbjct: 199 TKELQQLIRAGLRNPSLITVK 219
>gi|52545831|emb|CAH56233.1| hypothetical protein [Homo sapiens]
Length = 532
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 106/161 (65%), Gaps = 9/161 (5%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P+ +L +GG DV++ +++G N+++ TPGR
Sbjct: 85 AIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQGGNIIVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD R+L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSK 157
QT+ VE L +AGLRNPVRV V K V+ASS Q S+
Sbjct: 205 QTQEVENLVRAGLRNPVRVSV----KEKGVAASSAQKTPSR 241
>gi|417411641|gb|JAA52251.1| Putative atp-dependent rna helicase pitchoune, partial [Desmodus
rotundus]
Length = 563
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 114/186 (61%), Gaps = 26/186 (13%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI+ V F P +L +GG DV + +E G N+++ TPGR
Sbjct: 50 AIIITPTRELAVQIHEVLSHFTKPFPQFSQILWIGGRNPGEDVARFKEHGGNIVVATPGR 109
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD R+L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 110 LEDMFRRRAEGLDLAGCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 169
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVR+ V K +ASS Q KTP ++++NH
Sbjct: 170 QTQEVESLVRAGLRNPVRISV----KEKGATASSSQ----KTP-----------SRLQNH 210
Query: 177 HNLLIC 182
+ ++C
Sbjct: 211 Y--MVC 214
>gi|114050983|ref|NP_001039472.1| ATP-dependent RNA helicase DDX55 [Bos taurus]
gi|115502143|sp|Q2NL08.1|DDX55_BOVIN RecName: Full=ATP-dependent RNA helicase DDX55; AltName: Full=DEAD
box protein 55
gi|84708796|gb|AAI11256.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Bos taurus]
Length = 601
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/186 (46%), Positives = 113/186 (60%), Gaps = 26/186 (13%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P +L +GG DV + +E G N+++ TPGR
Sbjct: 85 AIIITPTRELAVQIEEVLSHFTKPFPQFSQILWIGGRNPGEDVARFKELGGNIIVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD R+LE+LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKAEGLDLASCVRSLEVLVLDEADRLLDMGFETSINTILEFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVR+ V K V+ASS Q KTP +++ NH
Sbjct: 205 QTQEVENLVRAGLRNPVRISV----KEKGVAASSTQ----KTP-----------SRLENH 245
Query: 177 HNLLIC 182
+ ++C
Sbjct: 246 Y--MVC 249
>gi|194375087|dbj|BAG62656.1| unnamed protein product [Homo sapiens]
Length = 411
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 106/161 (65%), Gaps = 9/161 (5%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P+ +L +GG DV++ +++G N+++ TPGR
Sbjct: 85 AIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQGGNIIVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD R+L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSK 157
QT+ VE L +AGLRNPVRV V K V+ASS Q S+
Sbjct: 205 QTQEVENLVRAGLRNPVRVSV----KEKGVAASSAQKTPSR 241
>gi|119618829|gb|EAW98423.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55, isoform CRA_d [Homo
sapiens]
Length = 375
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 106/161 (65%), Gaps = 9/161 (5%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P+ +L +GG DV++ +++G N+++ TPGR
Sbjct: 85 AIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQGGNIIVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD R+L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSK 157
QT+ VE L +AGLRNPVRV V K V+ASS Q S+
Sbjct: 205 QTQEVENLVRAGLRNPVRVSV----KEKGVAASSAQKTPSR 241
>gi|296478480|tpg|DAA20595.1| TPA: ATP-dependent RNA helicase DDX55 [Bos taurus]
Length = 601
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 103/161 (63%), Gaps = 9/161 (5%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P +L +GG DV + +E G N+++ TPGR
Sbjct: 85 AIIITPTRELAVQIEEVLSHFTKPFPQFSQILWIGGRNPGEDVARFKELGGNIIVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD R+LE+LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKAEGLDLASCVRSLEVLVLDEADRLLDMGFETSINTILEFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSK 157
QT+ VE L +AGLRNPVR+ V K V+ASS Q S+
Sbjct: 205 QTQEVENLVRAGLRNPVRISV----KEKGVAASSTQKTPSR 241
>gi|426247188|ref|XP_004017368.1| PREDICTED: ATP-dependent RNA helicase DDX55 [Ovis aries]
Length = 601
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 103/161 (63%), Gaps = 9/161 (5%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P +L +GG DV + +E G N+++ TPGR
Sbjct: 85 AIIITPTRELAVQIEEVLSHFTKPFPQFSQILWIGGRNPGEDVARFKELGGNIIVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD R+LE+LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKAEGLDLASCVRSLEVLVLDEADRLLDMGFETSINTILEFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSK 157
QT+ VE L +AGLRNPVR+ V K V+ASS Q S+
Sbjct: 205 QTQEVENLVRAGLRNPVRISV----KEKGVAASSTQKTPSR 241
>gi|402888051|ref|XP_003907390.1| PREDICTED: ATP-dependent RNA helicase DDX55 [Papio anubis]
Length = 607
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/185 (47%), Positives = 114/185 (61%), Gaps = 15/185 (8%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P +L +GG DV++ +++G N+++ TPGR
Sbjct: 85 AIIITPTRELAVQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQQGGNIIVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD R+L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVRV V K V+ASS Q KTP LE + V +
Sbjct: 205 QTQEVENLVRAGLRNPVRVSV----KEKGVAASSAQ----KTP--SRLENYYMVCKADEK 254
Query: 177 HNLLI 181
N L+
Sbjct: 255 FNQLV 259
>gi|126324314|ref|XP_001375375.1| PREDICTED: ATP-dependent RNA helicase DDX55 [Monodelphis domestica]
Length = 599
Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 105/161 (65%), Gaps = 9/161 (5%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P +LL+GG DV++ +E+G N+++ TPGR
Sbjct: 85 AIIITPTRELAIQINEVLLHFSKHFPQFSQILLIGGRNPGEDVERFKEQGGNIIVATPGR 144
Query: 62 LYDIMER-MDVLDFRN----LEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD N L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKAEGLDLANCVKSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSK 157
QT+ VE L +AGLRNPVR+ V K V+A+S Q S+
Sbjct: 205 QTQEVENLVRAGLRNPVRISV----KEKGVAATSTQKTPSR 241
>gi|157113939|ref|XP_001652148.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108877512|gb|EAT41737.1| AAEL006640-PA [Aedes aegypti]
Length = 607
Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/146 (54%), Positives = 105/146 (71%), Gaps = 6/146 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFIS--TLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTP 59
+IISPTREL++QI V Q F+ L K LL+GG V+ DV I +EGAN+LI TP
Sbjct: 86 AIIISPTRELATQISDVLQDFLEHEKLAIFKQKLLIGGNPVEEDVDSIRKEGANVLIATP 145
Query: 60 GRLYDIMERMDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
GRL D++ER L+ ++LE+LVLDEADRLLD+GF+ I+ I+ LP+ RRTGLFSA
Sbjct: 146 GRLKDLLERKGDLNLTVKVKSLELLVLDEADRLLDLGFESTINTILGYLPRQRRTGLFSA 205
Query: 116 TQTEAVEELSKAGLRNPVRVEVRAES 141
TQT+ V++L +AGLRNPV V V+ ++
Sbjct: 206 TQTKEVKDLMRAGLRNPVLVSVKEKA 231
>gi|395513838|ref|XP_003761129.1| PREDICTED: ATP-dependent RNA helicase DDX55 [Sarcophilus harrisii]
Length = 679
Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 106/163 (65%), Gaps = 13/163 (7%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P +LL+GG DV++ +E+G N+++ TPGR
Sbjct: 167 AIIITPTRELAIQISEVLLHFSKHFPQFSQILLIGGRNPGEDVERFKEQGGNIIVATPGR 226
Query: 62 LYDIMER-MDVLDFRN----LEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD N L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 227 LEDMFRRKAEGLDLANCVKSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 286
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTP 159
QT+ VE L +AGLRNPVR+ V K V+A+S Q KTP
Sbjct: 287 QTQEVENLVRAGLRNPVRISV----KEKGVAATSTQ----KTP 321
>gi|426374586|ref|XP_004054151.1| PREDICTED: ATP-dependent RNA helicase DDX55 [Gorilla gorilla
gorilla]
Length = 600
Score = 145 bits (367), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 87/185 (47%), Positives = 114/185 (61%), Gaps = 15/185 (8%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P+ +L +GG DV + +++G N+++ TPGR
Sbjct: 85 AIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVGRFKQQGGNIIVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD R+L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVRV V K V+ASS Q KTP LE + V +
Sbjct: 205 QTQEVENLVRAGLRNPVRVSV----KEKGVAASSAQ----KTP--SRLENYYMVCKADEK 254
Query: 177 HNLLI 181
N L+
Sbjct: 255 FNQLV 259
>gi|403292244|ref|XP_003937163.1| PREDICTED: ATP-dependent RNA helicase DDX55 [Saimiri boliviensis
boliviensis]
Length = 600
Score = 145 bits (367), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 87/185 (47%), Positives = 113/185 (61%), Gaps = 15/185 (8%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P +L +GG DV++ ++G N+++ TPGR
Sbjct: 85 AIIITPTRELAVQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFRQQGGNIIVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD R+L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKAEGLDLASSVRSLDVLVLDEADRLLDMGFEASINTILELLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVRV V K V+ASS Q KTP LE + V +
Sbjct: 205 QTQEVENLVRAGLRNPVRVSV----KEKGVAASSAQ----KTP--SRLENYYMVCKADEK 254
Query: 177 HNLLI 181
N L+
Sbjct: 255 FNQLV 259
>gi|383851919|ref|XP_003701478.1| PREDICTED: ATP-dependent RNA helicase DDX55-like [Megachile
rotundata]
Length = 589
Score = 145 bits (367), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 72/144 (50%), Positives = 102/144 (70%), Gaps = 5/144 (3%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI V Q F++ +P++K VLLVGG + D+ + GAN+++ TPGR
Sbjct: 82 AIIISPTRELAVQINEVLQQFLNNIPNLKEVLLVGGTTITEDIDNFKA-GANIIVATPGR 140
Query: 62 LYDIMERMDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQ 117
L DI+ ++ ++LEIL+LDEADRLLD+GF I I+S LP+LRRTGLFSATQ
Sbjct: 141 LEDILSNCKSINLAACVKSLEILILDEADRLLDLGFSATIDTILSYLPRLRRTGLFSATQ 200
Query: 118 TEAVEELSKAGLRNPVRVEVRAES 141
T+ ++ L +AGLRNP + V+ ++
Sbjct: 201 TKELQHLIRAGLRNPALITVKEKA 224
>gi|307182249|gb|EFN69580.1| ATP-dependent RNA helicase DDX55 [Camponotus floridanus]
Length = 589
Score = 145 bits (367), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 73/144 (50%), Positives = 104/144 (72%), Gaps = 5/144 (3%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL++QI + + F+ LP +K VLLVGGV +K D + +++ G N+++ TPGR
Sbjct: 82 AIIISPTRELATQISEILEKFLEKLPSLKQVLLVGGVTLKEDAENLKK-GVNIIVATPGR 140
Query: 62 LYDIMERMDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQ 117
L DI+ ++ ++LE LVLDEADRLLD+GF + I+S LP+LRRTGLFSATQ
Sbjct: 141 LEDILSNCSSINLNLCIKSLEFLVLDEADRLLDLGFSATLDSILSYLPRLRRTGLFSATQ 200
Query: 118 TEAVEELSKAGLRNPVRVEVRAES 141
T+ +++L +AGLRNP V V+ +S
Sbjct: 201 TKELQQLIRAGLRNPALVVVKEKS 224
>gi|395745041|ref|XP_002823989.2| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX55
[Pongo abelii]
Length = 602
Score = 145 bits (367), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 85/185 (45%), Positives = 112/185 (60%), Gaps = 15/185 (8%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P+ +L +GG DV++ +++G N+++ TPGR
Sbjct: 85 AIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQGGNIIVATPGR 144
Query: 62 LYDIMERMD-----VLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R R+L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKAEGLHLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVRV V K V+ASS Q KTP LE + V +
Sbjct: 205 QTQEVENLVRAGLRNPVRVSV----KEKGVAASSAQ----KTP--FRLENYYMVCKADEK 254
Query: 177 HNLLI 181
N L+
Sbjct: 255 FNQLV 259
>gi|187608275|ref|NP_001120242.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Xenopus (Silurana)
tropicalis]
gi|169642602|gb|AAI60434.1| ddx55 protein [Xenopus (Silurana) tropicalis]
Length = 594
Score = 145 bits (367), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 81/167 (48%), Positives = 105/167 (62%), Gaps = 13/167 (7%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P +LL+GG DV K +E G N+++ TPGR
Sbjct: 85 AIIITPTRELAVQIDEVLSYFTKHFPQFSQILLIGGSNPVDDVMKFKEHGGNIIVATPGR 144
Query: 62 LYDIMERM-DVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R D LD + L++L+LDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRQADGLDLVSYVKTLDVLILDEADRLLDMGFEASINTILGFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLH 163
QT+ +E L +AGLRNPVR+ V K V+A+ Q KTP+ L
Sbjct: 205 QTQELENLVRAGLRNPVRIAV----KEKGVAATCTQ----KTPIRLQ 243
>gi|355683383|gb|AER97089.1| DEAD box polypeptide 55 [Mustela putorius furo]
Length = 307
Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 86/185 (46%), Positives = 110/185 (59%), Gaps = 15/185 (8%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P +L +GG DV K +E+G N+++ TPGR
Sbjct: 65 ALIITPTRELAIQIDEVLAHFTKHFPQFSQILWIGGRNPGEDVAKFKEQGGNIIVATPGR 124
Query: 62 LYDIMERMD-----VLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R R+L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 125 LEDMFRRKAEGLALASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 184
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVR+ V K V+ASS Q KTP LE + V +
Sbjct: 185 QTQEVESLVRAGLRNPVRISV----KEKGVAASSTQ----KTP--SRLENYYMVCKADEK 234
Query: 177 HNLLI 181
N L+
Sbjct: 235 FNQLV 239
>gi|291235249|ref|XP_002737554.1| PREDICTED: CG9630-like [Saccoglossus kowalevskii]
Length = 453
Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 119/190 (62%), Gaps = 17/190 (8%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F+ +P +K++LL+GG DV K + G N++ TPGR
Sbjct: 85 AIIITPTRELALQIDEVLSEFVKRIPKLKTLLLIGGTNPIIDVNKFLDIGGNIITATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R D +D R LE+LVLDEAD+LLD+GF+ I+ I+S +PK RRTGLFSAT
Sbjct: 145 LVDLFHRKQDGIDLASYVRTLEVLVLDEADKLLDLGFENSINEILSYMPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVR-AESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMR- 174
QT+ VE+L +AGLRNPVR+ V+ ++KS + + + H+ + ++ R
Sbjct: 205 QTDEVEKLIRAGLRNPVRITVKEKQTKSQRLFGMGDKTS--------HMVLSFSTRSWRP 256
Query: 175 --NHHNLLIC 182
N + +++C
Sbjct: 257 FMNKNGVMVC 266
>gi|348554377|ref|XP_003463002.1| PREDICTED: ATP-dependent RNA helicase DDX55-like [Cavia porcellus]
Length = 596
Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 103/161 (63%), Gaps = 9/161 (5%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P +L +GG DV++ + EG N+++ TPGR
Sbjct: 85 AIIITPTRELAIQIDEVLSHFTKRFPQFSQILWIGGRNPGEDVERFKREGGNIIVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD R L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKAEGLDLASCVRALDVLVLDEADRLLDMGFEASINTILELLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSK 157
QT+ VE L +AGLRNPVR+ V K V+ASS Q S+
Sbjct: 205 QTQEVENLVRAGLRNPVRISV----KEKGVAASSTQKTPSR 241
>gi|380797487|gb|AFE70619.1| ATP-dependent RNA helicase DDX55, partial [Macaca mulatta]
Length = 571
Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 86/185 (46%), Positives = 113/185 (61%), Gaps = 15/185 (8%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P +L +GG DV++ +++G N+++ TPGR
Sbjct: 56 AIIITPTRELAVQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQQGGNIIVATPGR 115
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD R+L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 116 LEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 175
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVRV V K V+AS Q KTP LE + V +
Sbjct: 176 QTQEVENLVRAGLRNPVRVSV----KEKGVAASGAQ----KTP--SRLENYYMVCKADEK 225
Query: 177 HNLLI 181
N L+
Sbjct: 226 FNQLV 230
>gi|298714126|emb|CBJ27307.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 657
Score = 145 bits (366), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 73/141 (51%), Positives = 96/141 (68%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++QI+ V F L + K +LLVGG V+ + + GA++L+GTPGR+
Sbjct: 47 IILTPTRELANQIFGVVSKFSEALDEAKPLLLVGGTSVEECLAAFRKGGASILVGTPGRV 106
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D++ +V D R LE LVLDEAD LLDMGF ++ I S LPK RRTGLFSATQT +
Sbjct: 107 EDMLNNYNVFDTRELEALVLDEADTLLDMGFAGTLNSIFSLLPKQRRTGLFSATQTRETK 166
Query: 123 ELSKAGLRNPVRVEVRAESKS 143
L++AGLRNP V V SKS
Sbjct: 167 ALARAGLRNPATVSVAVRSKS 187
>gi|431912138|gb|ELK14276.1| ATP-dependent RNA helicase DDX55 [Pteropus alecto]
Length = 596
Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 86/185 (46%), Positives = 114/185 (61%), Gaps = 15/185 (8%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P +L +GG DV + +++G N+++ TPGR
Sbjct: 85 AIIITPTRELAIQIDEVLSHFTRPFPQFSQILWIGGRNPGEDVARFKQQGGNIVVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD ++L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVRV VR + V+ASS Q KTP LE + V +
Sbjct: 205 QTQEVESLVRAGLRNPVRVSVREKG----VAASSTQ----KTP--SRLENYYMVCKADEK 254
Query: 177 HNLLI 181
N L+
Sbjct: 255 FNQLV 259
>gi|297263806|ref|XP_001098453.2| PREDICTED: ATP-dependent RNA helicase DDX55-like isoform 1 [Macaca
mulatta]
Length = 743
Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 86/185 (46%), Positives = 113/185 (61%), Gaps = 15/185 (8%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P +L +GG DV++ +++G N+++ TPGR
Sbjct: 228 AIIITPTRELAVQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQQGGNIIVATPGR 287
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD R+L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 288 LEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 347
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVRV V K V+AS Q KTP LE + V +
Sbjct: 348 QTQEVENLVRAGLRNPVRVSV----KEKGVAASGAQ----KTP--SRLENYYMVCKADEK 397
Query: 177 HNLLI 181
N L+
Sbjct: 398 FNQLV 402
>gi|297263808|ref|XP_002798866.1| PREDICTED: ATP-dependent RNA helicase DDX55-like isoform 2 [Macaca
mulatta]
Length = 600
Score = 145 bits (365), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 86/185 (46%), Positives = 113/185 (61%), Gaps = 15/185 (8%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P +L +GG DV++ +++G N+++ TPGR
Sbjct: 85 AIIITPTRELAVQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQQGGNIIVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD R+L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVRV V K V+AS Q KTP LE + V +
Sbjct: 205 QTQEVENLVRAGLRNPVRVSV----KEKGVAASGAQ----KTP--SRLENYYMVCKADEK 254
Query: 177 HNLLI 181
N L+
Sbjct: 255 FNQLV 259
>gi|355564806|gb|EHH21306.1| hypothetical protein EGK_04327 [Macaca mulatta]
gi|383412655|gb|AFH29541.1| ATP-dependent RNA helicase DDX55 [Macaca mulatta]
Length = 600
Score = 145 bits (365), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 86/185 (46%), Positives = 113/185 (61%), Gaps = 15/185 (8%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P +L +GG DV++ +++G N+++ TPGR
Sbjct: 85 AIIITPTRELAVQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQQGGNIIVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD R+L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVRV V K V+AS Q KTP LE + V +
Sbjct: 205 QTQEVENLVRAGLRNPVRVSV----KEKGVAASGAQ----KTP--SRLENYYMVCKADEK 254
Query: 177 HNLLI 181
N L+
Sbjct: 255 FNQLV 259
>gi|167534053|ref|XP_001748705.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772946|gb|EDQ86592.1| predicted protein [Monosiga brevicollis MX1]
Length = 575
Score = 145 bits (365), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 112/174 (64%), Gaps = 3/174 (1%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+++SPTREL+ Q Y V + F+ D+ + L+ G +V+ DV +++E G N+++ TPGR
Sbjct: 53 AIVLSPTRELAQQTYDVVKTFLQHGVDLSACLITGAHDVQVDVNQLKE-GCNVIVATPGR 111
Query: 62 LYDIMERMDVL--DFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTE 119
L D++ + L ++LE+LVLDEADRLLDMGF++ I+ I + LPK RRTGLFSATQT
Sbjct: 112 LLDLLNKSGSLMKSVKHLEMLVLDEADRLLDMGFEQAITQIFTFLPKQRRTGLFSATQTN 171
Query: 120 AVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQM 173
V+ L++AGLRNPV+V V+ E + + Q S+ L L NQ+
Sbjct: 172 EVQALARAGLRNPVQVAVKVEHRQEGAGSVQQATPSTLINTYLFLSAEEKFNQL 225
>gi|340728636|ref|XP_003402625.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX55-like [Bombus terrestris]
Length = 598
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/141 (50%), Positives = 100/141 (70%), Gaps = 5/141 (3%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI V Q F+ +PD+K LLVGG + D K++ GAN++I TPGR
Sbjct: 82 AIIISPTRELAIQINEVLQKFLDNIPDLKQALLVGGTTIAEDADKLKA-GANIIIATPGR 140
Query: 62 LYDIMERMDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQ 117
L D++ ++ ++LE+L+LDEADRLLD+GF + I+S LP+LRRTGLFSATQ
Sbjct: 141 LEDMLSNCKSINLTAYVKSLEVLILDEADRLLDLGFSATLDTILSYLPRLRRTGLFSATQ 200
Query: 118 TEAVEELSKAGLRNPVRVEVR 138
T+ +++L +AGLRNP + V+
Sbjct: 201 TKELQQLIRAGLRNPALITVK 221
>gi|449476608|ref|XP_004176464.1| PREDICTED: ATP-dependent RNA helicase DDX55 [Taeniopygia guttata]
Length = 596
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/185 (46%), Positives = 112/185 (60%), Gaps = 15/185 (8%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P +L +GG DV+K +E G N+++ TPGR
Sbjct: 85 AIIITPTRELAIQIDEVLSHFTKHFPMFSQILFIGGRNPMEDVEKFKEHGGNIIVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R D LD + L++LVLDEADRLLDMGF+ ++ I+ LPK RRTGLFSAT
Sbjct: 145 LEDLFRRKADGLDLASCVKALDVLVLDEADRLLDMGFEASLNAILDFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVR+ V K V+AS+ Q KTP LE + V +
Sbjct: 205 QTQEVENLVRAGLRNPVRISV----KEKGVAASNTQ----KTP--TRLENYYMVCRADEK 254
Query: 177 HNLLI 181
N L+
Sbjct: 255 FNQLV 259
>gi|242009200|ref|XP_002425379.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212509173|gb|EEB12641.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 587
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/175 (49%), Positives = 118/175 (67%), Gaps = 8/175 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ V Q F+ +K +LLVGG V+ DVK +E+G N+++ TPGR
Sbjct: 83 AVIISPTRELAIQIFDVLQKFLEHC-QLKGLLLVGGDTVENDVKNYKEKGGNIIVATPGR 141
Query: 62 LYDIMERMD---VLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQT 118
D++ R + + ++LEIL+LDEADRLLD+GF+K ++ I+ LPK RRTGLFSATQT
Sbjct: 142 FEDLLVRQNCNLLGGVKSLEILILDEADRLLDLGFEKTLNNILLLLPKQRRTGLFSATQT 201
Query: 119 EAVEELSKAGLRNPVRVEVRAESK---SHHVSASSQQLAS-SKTPLGLHLEVIWN 169
+ VE+L++AGLRNPV V V+ + S VS S+ L S T LG + I N
Sbjct: 202 KEVEKLARAGLRNPVVVCVKEKVNTQISTPVSLSNYYLVSEGNTKLGTLIGFINN 256
>gi|350415720|ref|XP_003490728.1| PREDICTED: probable ATP-dependent RNA helicase DDX55 homolog
[Bombus impatiens]
Length = 589
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/141 (49%), Positives = 101/141 (71%), Gaps = 5/141 (3%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI V Q F+ +PD+K VLLVGG + D +++ GAN+++ TPGR
Sbjct: 82 AIIISPTRELAIQINEVLQKFLDNIPDLKQVLLVGGTTIAEDADRLKA-GANIIVATPGR 140
Query: 62 LYDIMERMDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQ 117
L D++ ++ ++LE+L+LDEADRLLD+GF + I+S LP+LRRTGLFSATQ
Sbjct: 141 LEDMLSNCKSINLTAYVKSLEVLILDEADRLLDLGFSATLDTILSYLPRLRRTGLFSATQ 200
Query: 118 TEAVEELSKAGLRNPVRVEVR 138
T+ +++L +AGLRNP + V+
Sbjct: 201 TKELQQLIRAGLRNPAVITVK 221
>gi|18676762|dbj|BAB85021.1| unnamed protein product [Homo sapiens]
Length = 353
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 106/161 (65%), Gaps = 9/161 (5%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P+ +L +GG DV++ +++G N+++ TPGR
Sbjct: 85 AIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQGGNIIVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD R+L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSK 157
+T+ VE L +AGLRNPVRV V K V+ASS Q S+
Sbjct: 205 RTQEVENLVRAGLRNPVRVSV----KEKGVAASSAQKTPSR 241
>gi|351698563|gb|EHB01482.1| ATP-dependent RNA helicase DDX55 [Heterocephalus glaber]
Length = 600
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/167 (48%), Positives = 103/167 (61%), Gaps = 13/167 (7%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P +L +GG DV++ + +G N+++ TPGR
Sbjct: 85 AIIITPTRELAIQIDEVLSHFTKPFPQFSQILWIGGRNPGEDVERFKRQGGNIIVATPGR 144
Query: 62 LYDIMERMD-----VLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R R L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRREAEGLALASCVRTLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLH 163
QT+ VE L +AGLRNPVR+ V K V+ASS Q KTP LH
Sbjct: 205 QTQEVENLVRAGLRNPVRISV----KEKGVAASSTQ----KTPSRLH 243
>gi|332018823|gb|EGI59382.1| Putative ATP-dependent RNA helicase DDX55-like protein [Acromyrmex
echinatior]
Length = 589
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/142 (52%), Positives = 105/142 (73%), Gaps = 3/142 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+SPTREL+ QI + + F+ +P +K VLLVGGV ++ DV+K+++ GAN+++ TPGR
Sbjct: 82 AIIVSPTRELAIQISEILEEFLKRIPLLKQVLLVGGVTLQKDVEKLKK-GANIIVATPGR 140
Query: 62 LYDIMERMDVLDF--RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTE 119
L DI+ L ++LE LVLDEADRLLD+GF + I+S LP+LRRTGLFSATQT+
Sbjct: 141 LKDILSNYINLGLYIKSLEFLVLDEADRLLDLGFSATLDSILSYLPRLRRTGLFSATQTK 200
Query: 120 AVEELSKAGLRNPVRVEVRAES 141
+E+L +AGLRNP + V+ +S
Sbjct: 201 ELEQLIRAGLRNPALIVVKEKS 222
>gi|390468336|ref|XP_002807202.2| PREDICTED: ATP-dependent RNA helicase DDX55 [Callithrix jacchus]
Length = 600
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/185 (47%), Positives = 113/185 (61%), Gaps = 15/185 (8%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P +L +GG DV++ ++G N+++ TPGR
Sbjct: 85 AIIITPTRELAIQIDEVLSHFTRHFPQFSQILWIGGRNPGEDVERFRQQGGNIIVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD R+L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEVLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVRV V K V+ASS Q KTP LE + V +
Sbjct: 205 QTQEVENLVRAGLRNPVRVSV----KEKGVAASSVQ----KTP--SRLENYYMVCKADEK 254
Query: 177 HNLLI 181
N L+
Sbjct: 255 FNQLV 259
>gi|404501489|ref|NP_001258255.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Rattus norvegicus]
gi|149063251|gb|EDM13574.1| rCG21751, isoform CRA_b [Rattus norvegicus]
Length = 600
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/186 (44%), Positives = 115/186 (61%), Gaps = 26/186 (13%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++I+PTREL+ QI V F P +L +GG DV++ ++ G N+++ TPGR
Sbjct: 85 AIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQHGGNIIVATPGR 144
Query: 62 LYDIMER----MDVLDF-RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R +D+ + ++L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKAEGLDLASYVKSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVR+ V K V+ASS Q KTP +++ NH
Sbjct: 205 QTQEVENLVRAGLRNPVRISV----KEKGVAASSTQ----KTP-----------SRLENH 245
Query: 177 HNLLIC 182
+ +IC
Sbjct: 246 Y--MIC 249
>gi|328772701|gb|EGF82739.1| hypothetical protein BATDEDRAFT_1910, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 490
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 104/143 (72%), Gaps = 3/143 (2%)
Query: 2 GMIISPTRELSSQIYH---VAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGT 58
+IISPTREL+ QIY+ F +T + +LL+GG V+ DV++ GA++LIGT
Sbjct: 67 AIIISPTRELAKQIYNPQSTDNDFPATPVCISHMLLIGGNIVREDVQQFAATGAHILIGT 126
Query: 59 PGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQT 118
PGRL D+++R ++ + + LE+L++DEADRLLDMGF+ ++ I+ ++PK RRTGLFSAT
Sbjct: 127 PGRLDDLLKRQNIFNCKELEVLIMDEADRLLDMGFELALTSILRKIPKQRRTGLFSATMN 186
Query: 119 EAVEELSKAGLRNPVRVEVRAES 141
E + +L KAGLRNPV++ V+ E+
Sbjct: 187 EGLGQLVKAGLRNPVKIVVKVEA 209
>gi|335301138|ref|XP_003359134.1| PREDICTED: ATP-dependent RNA helicase DDX55 isoform 2 [Sus scrofa]
Length = 569
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/185 (45%), Positives = 111/185 (60%), Gaps = 15/185 (8%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P +L +GG DV + +E G N+++ TPGR
Sbjct: 85 AIIITPTRELAVQIDEVLSHFTKPFPQFSQILWIGGRNPGEDVARFKEHGGNIIVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD ++L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVR+ V K +ASS Q KTP LE + V +
Sbjct: 205 QTQEVENLVRAGLRNPVRISV----KEKGAAASSTQ----KTP--SRLENYYMVCKADEK 254
Query: 177 HNLLI 181
N L+
Sbjct: 255 FNQLV 259
>gi|344297284|ref|XP_003420329.1| PREDICTED: ATP-dependent RNA helicase DDX55 [Loxodonta africana]
Length = 599
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/185 (45%), Positives = 114/185 (61%), Gaps = 15/185 (8%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P + +L +GG DV++ + +G N+++ TPGR
Sbjct: 85 AIIITPTRELAIQIDEVLSHFTKHFPQLSQILWIGGRNPGEDVERFKAQGGNIIVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD ++L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVR+ V K V+ASS Q KTP LE + V +
Sbjct: 205 QTQEVENLVRAGLRNPVRISV----KEKGVAASSTQ----KTP--SRLENYYMVCKADEK 254
Query: 177 HNLLI 181
N L+
Sbjct: 255 FNQLV 259
>gi|12849752|dbj|BAB28466.1| unnamed protein product [Mus musculus]
Length = 528
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 114/186 (61%), Gaps = 26/186 (13%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++I+PTREL+ QI V F P +L +GG DV++ ++ G N+++ TPGR
Sbjct: 85 AIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQHGGNIIVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD ++L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVR+ V K V+ASS Q KTP +++ NH
Sbjct: 205 QTQEVENLVRAGLRNPVRISV----KEKGVAASSTQ----KTP-----------SRLENH 245
Query: 177 HNLLIC 182
+ +IC
Sbjct: 246 Y--MIC 249
>gi|335301136|ref|XP_001927747.2| PREDICTED: ATP-dependent RNA helicase DDX55 isoform 1 [Sus scrofa]
Length = 600
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/185 (45%), Positives = 111/185 (60%), Gaps = 15/185 (8%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P +L +GG DV + +E G N+++ TPGR
Sbjct: 85 AIIITPTRELAVQIDEVLSHFTKPFPQFSQILWIGGRNPGEDVARFKEHGGNIIVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD ++L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVR+ V K +ASS Q KTP LE + V +
Sbjct: 205 QTQEVENLVRAGLRNPVRISV----KEKGAAASSTQ----KTP--SRLENYYMVCKADEK 254
Query: 177 HNLLI 181
N L+
Sbjct: 255 FNQLV 259
>gi|327276052|ref|XP_003222785.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX55-like [Anolis carolinensis]
Length = 597
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/167 (48%), Positives = 105/167 (62%), Gaps = 13/167 (7%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++I+PTREL+ QI V F P L +GG DV++ +E G N+L+ TPGR
Sbjct: 85 AIVITPTRELAIQIDEVISHFTKHFPQFSQCLFIGGNNPMEDVERFKEHGGNILVATPGR 144
Query: 62 LYDIMERM-DVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD R+L+ILVLDEADRLLDMGF+ ++ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKSEGLDLASSVRSLDILVLDEADRLLDMGFEASLNTILDILPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLH 163
QT+ VE L +AGLRNPVR+ V K ++AS+ Q KTP L
Sbjct: 205 QTQEVENLVRAGLRNPVRISV----KEKDMAASNTQ----KTPTRLQ 243
>gi|347965532|ref|XP_321934.5| AGAP001223-PA [Anopheles gambiae str. PEST]
gi|333470468|gb|EAA01795.5| AGAP001223-PA [Anopheles gambiae str. PEST]
Length = 611
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 106/148 (71%), Gaps = 6/148 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFIS--TLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTP 59
+I+SPTREL++QI+ V F++ L + +L+GG V+ DV I ++GAN+L+ TP
Sbjct: 86 AVIVSPTRELATQIHDVLSEFLAHDELRCFRQKMLIGGNSVEEDVMSILKQGANILVATP 145
Query: 60 GRLYDIMERMDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
GRL D+ ER L+ +NLE+LVLDEADRLLDMGF+ I+ I++ LP RRTGLFSA
Sbjct: 146 GRLQDLFERKGDLNLAAKVKNLELLVLDEADRLLDMGFEATINTILAYLPCQRRTGLFSA 205
Query: 116 TQTEAVEELSKAGLRNPVRVEVRAESKS 143
TQT+ V++L +AGLRNPV V VR ++ +
Sbjct: 206 TQTKEVKDLMRAGLRNPVLVSVREKATT 233
>gi|28175486|gb|AAH43052.1| Ddx55 protein, partial [Mus musculus]
Length = 602
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 114/186 (61%), Gaps = 26/186 (13%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++I+PTREL+ QI V F P +L +GG DV++ ++ G N+++ TPGR
Sbjct: 91 AIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQHGGNIIVATPGR 150
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD ++L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 151 LEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 210
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVR+ V K V+ASS Q KTP +++ NH
Sbjct: 211 QTQEVENLVRAGLRNPVRISV----KEKGVAASSTQ----KTP-----------SRLENH 251
Query: 177 HNLLIC 182
+ +IC
Sbjct: 252 Y--MIC 255
>gi|443716343|gb|ELU07919.1| hypothetical protein CAPTEDRAFT_209893 [Capitella teleta]
Length = 483
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/181 (45%), Positives = 112/181 (61%), Gaps = 13/181 (7%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I++PTREL+ QI V F+ +P + L +GG DV K E G N+L+ TPGR
Sbjct: 81 ALIVTPTRELAVQIDEVLGEFLKEIPHITHQLFIGGNNPMTDVNKFMEHGGNILVATPGR 140
Query: 62 LYDIMERMD-----VLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D++ R D + LE+LVLDEAD+LL MGFQ+ ++ I+S LPK RRTGLFSAT
Sbjct: 141 LVDMLNRRDEGLDLTASVKALEVLVLDEADQLLAMGFQRSLNTILSYLPKQRRTGLFSAT 200
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGL-HLEVIWNVNQMRN 175
QT+ +E+L +AGLRNPVRV V+ E +H + + KTP L + +I +Q N
Sbjct: 201 QTKELEDLIRAGLRNPVRVAVK-ERGAH------GEEVNRKTPASLMNYYMIVESDQKFN 253
Query: 176 H 176
H
Sbjct: 254 H 254
>gi|148687631|gb|EDL19578.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55, isoform CRA_b [Mus
musculus]
Length = 602
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 114/186 (61%), Gaps = 26/186 (13%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++I+PTREL+ QI V F P +L +GG DV++ ++ G N+++ TPGR
Sbjct: 91 AIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQHGGNIIVATPGR 150
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD ++L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 151 LEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 210
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVR+ V K V+ASS Q KTP +++ NH
Sbjct: 211 QTQEVENLVRAGLRNPVRISV----KEKGVAASSTQ----KTP-----------SRLENH 251
Query: 177 HNLLIC 182
+ +IC
Sbjct: 252 Y--MIC 255
>gi|117647283|ref|NP_080685.2| ATP-dependent RNA helicase DDX55 isoform 1 [Mus musculus]
gi|115502145|sp|Q6ZPL9.2|DDX55_MOUSE RecName: Full=ATP-dependent RNA helicase DDX55; AltName: Full=DEAD
box protein 55
gi|26329441|dbj|BAC28459.1| unnamed protein product [Mus musculus]
Length = 600
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 114/186 (61%), Gaps = 26/186 (13%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++I+PTREL+ QI V F P +L +GG DV++ ++ G N+++ TPGR
Sbjct: 85 AIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQHGGNIIVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD ++L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVR+ V K V+ASS Q KTP +++ NH
Sbjct: 205 QTQEVENLVRAGLRNPVRISV----KEKGVAASSTQ----KTP-----------SRLENH 245
Query: 177 HNLLIC 182
+ +IC
Sbjct: 246 Y--MIC 249
>gi|109734461|gb|AAI17787.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Mus musculus]
gi|109734859|gb|AAI17788.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Mus musculus]
Length = 600
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 114/186 (61%), Gaps = 26/186 (13%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++I+PTREL+ QI V F P +L +GG DV++ ++ G N+++ TPGR
Sbjct: 85 AIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQHGGNIIVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD ++L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVR+ V K V+ASS Q KTP +++ NH
Sbjct: 205 QTQEVENLVRAGLRNPVRISV----KEKGVAASSTQ----KTP-----------SRLENH 245
Query: 177 HNLLIC 182
+ +IC
Sbjct: 246 Y--MIC 249
>gi|26346388|dbj|BAC36845.1| unnamed protein product [Mus musculus]
Length = 533
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 114/186 (61%), Gaps = 26/186 (13%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++I+PTREL+ QI V F P +L +GG DV++ ++ G N+++ TPGR
Sbjct: 85 AIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQHGGNIIVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD ++L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVR+ V K V+ASS Q KTP +++ NH
Sbjct: 205 QTQEVENLVRAGLRNPVRISV----KEKGVAASSTQ----KTP-----------SRLENH 245
Query: 177 HNLLIC 182
+ +IC
Sbjct: 246 Y--MIC 249
>gi|322780836|gb|EFZ10065.1| hypothetical protein SINV_10370 [Solenopsis invicta]
Length = 582
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/144 (49%), Positives = 104/144 (72%), Gaps = 5/144 (3%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+SPTREL++QI + F+ +P +K VLLVGGV +K DV+ +++ GAN+++ TPGR
Sbjct: 82 AIIVSPTRELATQISEILGEFLKEIPSLKQVLLVGGVTLKKDVETLKK-GANIIVATPGR 140
Query: 62 LYDIMERMDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQ 117
L D++ + + ++LE VLDEADRLLD+GF + I+S LP+LRRTGLFSATQ
Sbjct: 141 LEDVLSNRNSIGLNLCVKSLEFFVLDEADRLLDLGFSVTLDSILSYLPRLRRTGLFSATQ 200
Query: 118 TEAVEELSKAGLRNPVRVEVRAES 141
T+ V++L +AGLRNP + V+ +S
Sbjct: 201 TKQVQQLIRAGLRNPALIVVKEKS 224
>gi|299890889|ref|NP_001177724.1| ATP-dependent RNA helicase DDX55 isoform 2 [Mus musculus]
Length = 596
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 114/186 (61%), Gaps = 26/186 (13%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++I+PTREL+ QI V F P +L +GG DV++ ++ G N+++ TPGR
Sbjct: 85 AIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQHGGNIIVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD ++L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVR+ V K V+ASS Q KTP +++ NH
Sbjct: 205 QTQEVENLVRAGLRNPVRISV----KEKGVAASSTQ----KTP-----------SRLENH 245
Query: 177 HNLLIC 182
+ +IC
Sbjct: 246 Y--MIC 249
>gi|148687630|gb|EDL19577.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 55, isoform CRA_a [Mus
musculus]
Length = 618
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 114/186 (61%), Gaps = 26/186 (13%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++I+PTREL+ QI V F P +L +GG DV++ ++ G N+++ TPGR
Sbjct: 103 AIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQHGGNIIVATPGR 162
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD ++L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 163 LEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 222
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVR+ V K V+ASS Q KTP +++ NH
Sbjct: 223 QTQEVENLVRAGLRNPVRISV----KEKGVAASSTQ----KTP-----------SRLENH 263
Query: 177 HNLLIC 182
+ +IC
Sbjct: 264 Y--MIC 267
>gi|74181724|dbj|BAE32574.1| unnamed protein product [Mus musculus]
Length = 618
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 114/186 (61%), Gaps = 26/186 (13%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++I+PTREL+ QI V F P +L +GG DV++ ++ G N+++ TPGR
Sbjct: 103 AIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQHGGNIIVATPGR 162
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD ++L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 163 LEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 222
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVR+ V K V+ASS Q KTP +++ NH
Sbjct: 223 QTQEVENLVRAGLRNPVRISV----KEKGVAASSTQ----KTP-----------SRLENH 263
Query: 177 HNLLIC 182
+ +IC
Sbjct: 264 Y--MIC 267
>gi|156544612|ref|XP_001603959.1| PREDICTED: probable ATP-dependent RNA helicase DDX55 homolog
[Nasonia vitripennis]
Length = 591
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/141 (53%), Positives = 101/141 (71%), Gaps = 5/141 (3%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++ISPTREL++QI V F+ LP K VLLVGG VK DV+++ + G N++I TPGR
Sbjct: 82 AIVISPTRELATQISQVLAKFLEKLPVFKQVLLVGGSTVKDDVEQLRK-GCNIIIATPGR 140
Query: 62 LYDIMERMDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQ 117
L DI+ ++ ++LE+LVLDEADRLLD+GF I+ I+ LP+LRRTGLFSATQ
Sbjct: 141 LEDILTNCKEINLAGAIKSLELLVLDEADRLLDLGFYATINTILRYLPRLRRTGLFSATQ 200
Query: 118 TEAVEELSKAGLRNPVRVEVR 138
T+ +E+L +AGLRNP V V+
Sbjct: 201 TKELEQLIRAGLRNPAIVTVQ 221
>gi|37360468|dbj|BAC98212.1| mKIAA1595 protein [Mus musculus]
Length = 615
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 114/186 (61%), Gaps = 26/186 (13%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++I+PTREL+ QI V F P +L +GG DV++ ++ G N+++ TPGR
Sbjct: 100 AIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQHGGNIIVATPGR 159
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD ++L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 160 LEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 219
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVR+ V K V+ASS Q KTP +++ NH
Sbjct: 220 QTQEVENLVRAGLRNPVRISV----KEKGVAASSTQ----KTP-----------SRLENH 260
Query: 177 HNLLIC 182
+ +IC
Sbjct: 261 Y--MIC 264
>gi|338727802|ref|XP_001915471.2| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX55-like [Equus caballus]
Length = 628
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 109/185 (58%), Gaps = 15/185 (8%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F P +L +GG DV + +E+G N+++ TPGR
Sbjct: 85 AIIITPTRELAIQIDEVLSHFTKPFPQFSQILWIGGRNPGEDVARFKEQGGNIIVATPGR 144
Query: 62 LYDIMERMD-----VLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R R L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKAEGLALASCVRALDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVR+ V K ++ASS Q KTP LE + V +
Sbjct: 205 QTQEVENLVRAGLRNPVRISV----KEKGLAASSTQ----KTP--SRLENYYMVCKADEK 254
Query: 177 HNLLI 181
N L+
Sbjct: 255 FNQLV 259
>gi|270011943|gb|EFA08391.1| hypothetical protein TcasGA2_TC006038 [Tribolium castaneum]
Length = 578
Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 74/145 (51%), Positives = 101/145 (69%), Gaps = 6/145 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL++QI V + ++ + S+LLVGG V+ D+ ++ G N++I TPGR
Sbjct: 80 ALIISPTRELATQINQVLNQLLESISGITSLLLVGGNSVEEDLNNLKCNGGNIIICTPGR 139
Query: 62 LYDIMERMD----VLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQ 117
D++ R L +NLEIL+LDEADRLLD GF+K + I+S LPK RRTGLFSATQ
Sbjct: 140 FEDLLSRKSDFNLTLALKNLEILILDEADRLLDYGFRKSLDVILSYLPKQRRTGLFSATQ 199
Query: 118 TEAVEELSKAGLRNP--VRVEVRAE 140
T+ +++L +AGLRNP V V V+AE
Sbjct: 200 TKQLQDLIRAGLRNPVLVSVSVKAE 224
>gi|354491440|ref|XP_003507863.1| PREDICTED: ATP-dependent RNA helicase DDX55 [Cricetulus griseus]
gi|344248742|gb|EGW04846.1| ATP-dependent RNA helicase DDX55 [Cricetulus griseus]
Length = 600
Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 82/186 (44%), Positives = 114/186 (61%), Gaps = 26/186 (13%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++I+PTREL+ QI V F P +L +GG DV++ ++ G N+++ TPGR
Sbjct: 85 AIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQHGGNIIVATPGR 144
Query: 62 LYDIMERM-DVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD ++L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKSEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVR+ V K V+A+S Q KTP +++ NH
Sbjct: 205 QTQEVENLVRAGLRNPVRISV----KEKGVAANSTQ----KTP-----------SRLENH 245
Query: 177 HNLLIC 182
+ +IC
Sbjct: 246 Y--MIC 249
>gi|12856848|dbj|BAB30802.1| unnamed protein product [Mus musculus]
Length = 499
Score = 142 bits (357), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 82/186 (44%), Positives = 114/186 (61%), Gaps = 26/186 (13%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++I+PTREL+ QI V F P +L +GG DV++ ++ G N+++ TPGR
Sbjct: 85 AIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQHGGNIIVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD ++L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
QT+ VE L +AGLRNPVR+ V K V+A+S Q KTP +++ NH
Sbjct: 205 QTQEVENLVRAGLRNPVRISV----KEKGVAATSTQ----KTP-----------SRLENH 245
Query: 177 HNLLIC 182
+ +IC
Sbjct: 246 Y--MIC 249
>gi|291414270|ref|XP_002723386.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Oryctolagus
cuniculus]
Length = 600
Score = 142 bits (357), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 105/161 (65%), Gaps = 9/161 (5%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++I+PTREL+ QI V F P + +L +GG DV++ +++G N+++ TPGR
Sbjct: 85 AIVITPTRELAIQIDEVLSHFTRHFPQLSQILWIGGRNPGEDVERFKKQGGNIVVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD + L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKAEGLDLASCVKALDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSK 157
QT+ VE L +AGLRNPVR+ V K V+ASS Q S+
Sbjct: 205 QTQEVENLVRAGLRNPVRISV----KEKGVAASSTQKTPSR 241
>gi|307195496|gb|EFN77382.1| Probable ATP-dependent RNA helicase DDX55-like protein
[Harpegnathos saltator]
Length = 588
Score = 141 bits (356), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 70/144 (48%), Positives = 105/144 (72%), Gaps = 5/144 (3%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL++QI + + F+ +P +K VLLVGGV ++ D +K+++ G N+++ TPGR
Sbjct: 81 AIIISPTRELATQISEILEKFLKRIPLLKQVLLVGGVTLQEDAEKLKK-GVNIIVATPGR 139
Query: 62 LYDIMERMDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQ 117
L DI+ + ++LE+L+LDEADRLLD+GF + I+S LP+LRRTGLFSATQ
Sbjct: 140 LEDILSNCTSIRLSSCVKSLELLILDEADRLLDLGFSTSLDSILSYLPRLRRTGLFSATQ 199
Query: 118 TEAVEELSKAGLRNPVRVEVRAES 141
T+ +++L +AGLRNP + V+ +S
Sbjct: 200 TKELQQLIRAGLRNPALIVVKEKS 223
>gi|395846785|ref|XP_003796074.1| PREDICTED: ATP-dependent RNA helicase DDX55 [Otolemur garnettii]
Length = 600
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 113/189 (59%), Gaps = 22/189 (11%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI V F +L +GG DV++ +++G N+++ TPGR
Sbjct: 85 AIIITPTRELAIQIDEVLAHFTKHFSQFSQILWIGGRNPGEDVERFKQQGGNIIVATPGR 144
Query: 62 LYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
L D+ R + LD R+L++LVLDEADRLLDMGF+ I+ I+ LPK RRTGLFSAT
Sbjct: 145 LEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLH-----LEVIWNVN 171
QT+ VE L +AGLRNPVRV V K V+A++ Q KTP L + N
Sbjct: 205 QTQEVENLVRAGLRNPVRVSV----KEKGVAATNTQ----KTPSRLENYYMVCKADEKFN 256
Query: 172 QM----RNH 176
QM RNH
Sbjct: 257 QMVHFLRNH 265
>gi|198428638|ref|XP_002129939.1| PREDICTED: similar to ATP-dependent RNA helicase DDX55 (DEAD box
protein 55) [Ciona intestinalis]
Length = 592
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 110/167 (65%), Gaps = 7/167 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFIST--LPDVKSVLLVGGV-EVKADVKKIEEEGANLLIGT 58
+I+SPTREL+SQI+ V + F+ P S LL+GG +++ D E G+N+++GT
Sbjct: 81 AVIVSPTRELASQIHEVIEEFLDDQHCP-FTSTLLIGGTGDIENDTNDFVENGSNIIVGT 139
Query: 59 PGRLYDIMERMDVL--DFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
PGR+ +E+ +L R+LE+L+LDEADRLLD+GF + ++ I+ LPK RRTGLFSAT
Sbjct: 140 PGRISFALEKCLMLRSGVRSLEVLILDEADRLLDLGFHRTLTTILGYLPKQRRTGLFSAT 199
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLH 163
QT V +L KAG+RNPV++ V+ E K AS Q +KTP L
Sbjct: 200 QTTEVVQLMKAGMRNPVKISVK-EKKQDLEFASLDQSGVTKTPSSLQ 245
>gi|326426538|gb|EGD72108.1| NUP98-DDX10 fusion protein type 1 [Salpingoeca sp. ATCC 50818]
Length = 522
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/140 (49%), Positives = 100/140 (71%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++SPTREL+ Q +HV + P + VL+ GG + + D+ +E+ G N+++ TPGRL
Sbjct: 130 IVLSPTRELAQQTHHVLSDLLKDSP-LTHVLITGGKDAETDIVSMEKHGTNIIVATPGRL 188
Query: 63 YDIMERMDVL--DFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
D+++R+ L + + LE+ V+DEADRLLDMGF+ ++ I++ LPK RRTGLFSATQT+
Sbjct: 189 NDLIKRVPSLATNIKLLEVFVMDEADRLLDMGFKTTLNEILAVLPKQRRTGLFSATQTKE 248
Query: 121 VEELSKAGLRNPVRVEVRAE 140
VE L +AGLRNPVRV V E
Sbjct: 249 VELLVRAGLRNPVRVTVAVE 268
>gi|428173148|gb|EKX42052.1| hypothetical protein GUITHDRAFT_141524 [Guillardia theta CCMP2712]
Length = 443
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 97/143 (67%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++I+PTREL+ QI VA+ + +P++ +L GG + ++ EEG N++IGTPGRL
Sbjct: 220 LVIAPTRELAMQILSVAKLMSACVPEISVAILTGGSDNDETLRVFLEEGGNIVIGTPGRL 279
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+ ++ + + LE+L+LDEADRLLDMGFQ ++ I+ +LPKLRRTGLFSAT V
Sbjct: 280 QHTLTKVTQFNVKKLELLILDEADRLLDMGFQAALNSILEKLPKLRRTGLFSATMNNEVA 339
Query: 123 ELSKAGLRNPVRVEVRAESKSHH 145
L++AGLRNP ++ V K++
Sbjct: 340 ALARAGLRNPRQITVTVHGKANK 362
>gi|321470641|gb|EFX81616.1| hypothetical protein DAPPUDRAFT_195959 [Daphnia pulex]
Length = 594
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 105/160 (65%), Gaps = 6/160 (3%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVE-VKADVKKIEEEGANLLIGTPG 60
+IISPTREL+SQI V F+ LP + ++GG V D++ GA+++I TPG
Sbjct: 81 ALIISPTRELASQIDEVLTKFLINLPQFTHLQMIGGAHTVVQDIRDFTSHGAHIIITTPG 140
Query: 61 RLYDIMERM-DVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
R D++ R D ++ ++LEIL+LDEADRLLD+GF ++ I+ LPK RRTGLFSA
Sbjct: 141 RFMDLLIRQGDHINLAGGLKSLEILILDEADRLLDLGFHATLNTILGFLPKQRRTGLFSA 200
Query: 116 TQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLAS 155
TQT VE L++AGLRNPV V V+ ++ ++ S + LA+
Sbjct: 201 TQTREVESLARAGLRNPVAVTVKEKNLNNDGSRTPASLAN 240
>gi|170042810|ref|XP_001849105.1| ATP-dependent RNA helicase DDX55 [Culex quinquefasciatus]
gi|167866262|gb|EDS29645.1| ATP-dependent RNA helicase DDX55 [Culex quinquefasciatus]
Length = 610
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/146 (50%), Positives = 99/146 (67%), Gaps = 6/146 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFIS--TLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTP 59
+I+SPTREL++QI V F+ L LL+GG V+ DV I EG+ +L+ TP
Sbjct: 86 AIIVSPTRELATQISDVLGQFLGHEELGKFSQKLLIGGNSVEEDVSGIVREGSTVLVATP 145
Query: 60 GRLYDIMERMDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
GRL D+ ER L+ ++LE+LVLDEADRLLD+GF+ I+ I+ LP+ RRTGLFSA
Sbjct: 146 GRLKDLFERKGDLNMASRVKSLELLVLDEADRLLDLGFETTINTILGYLPRQRRTGLFSA 205
Query: 116 TQTEAVEELSKAGLRNPVRVEVRAES 141
TQT+ V +L +AGLRNPV V V+ ++
Sbjct: 206 TQTKEVRDLMRAGLRNPVLVSVKEKT 231
>gi|325179717|emb|CCA14120.1| DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]
Length = 693
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 106/158 (67%), Gaps = 8/158 (5%)
Query: 1 MGMIISPTRELSSQIYHVAQPFIS-TLPDVKSVLLVGGVEVKADVKKIEEEGAN---LLI 56
+ MI+SPTREL+ QI+ + + F + LP V + L VGG + D+++I +E +++
Sbjct: 89 VAMILSPTRELAKQIHSLCEQFFTRVLPQVFTGLFVGGNATEMDLQRIIDETMGKCLVMV 148
Query: 57 GTPGRLYDIMERM----DVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGL 112
GTPGR+ DI R L+ + E+L+LDEAD LLD+GF+++I I+ +PK RRTGL
Sbjct: 149 GTPGRILDIWTRFAKKNTPLNVEDFEMLILDEADTLLDLGFKQEIDQILQYVPKQRRTGL 208
Query: 113 FSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASS 150
FSATQT+ V +L++AGLRNP+ + V+ ES S V ++
Sbjct: 209 FSATQTQEVRDLARAGLRNPIVISVQVESGSQQVIPTT 246
>gi|403333562|gb|EJY65888.1| hypothetical protein OXYTRI_13953 [Oxytricha trifallax]
Length = 536
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 116/187 (62%), Gaps = 8/187 (4%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+G+I +P REL+ QI++V + F +PD L GG +++ DV++I+E+G N++IGT G
Sbjct: 89 VGLIFAPARELAFQIHNVVKQFEHLIPDFSINFLTGGTKLEYDVQRIKEKGCNVVIGTIG 148
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
R++D+ + D++ F+ +E+L++DEADRLL+ G + + ++ LPK RRTGLFSAT T
Sbjct: 149 RIFDLYSK-DLISFKKIEVLIMDEADRLLETGNENMLQQLLGALPKQRRTGLFSATMTSQ 207
Query: 121 VEELSKAGLRNPVRVEVRAE------SKSHHVSASSQQLASSKTPLGLHLEVIWNVNQ-M 173
++ L + G+RNP V+VR E ++ VS L K L ++ I V Q +
Sbjct: 208 LKSLIRIGMRNPYFVDVRVEMSGIFSTEKDKVSIQQFDLHGDKLVLNKQIQDINEVPQNL 267
Query: 174 RNHHNLL 180
N + L+
Sbjct: 268 ENFYTLI 274
>gi|118376356|ref|XP_001021360.1| DEAD/DEAH box helicase family protein [Tetrahymena thermophila]
gi|89303127|gb|EAS01115.1| DEAD/DEAH box helicase family protein [Tetrahymena thermophila
SB210]
Length = 598
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/143 (49%), Positives = 99/143 (69%), Gaps = 6/143 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSV--LLVGGVEVKADVKKIEEEGANLLIGTP 59
++I+PTREL+ QI+ +A S L + + L +GGV K DV I+ +GAN+LI TP
Sbjct: 85 ALVIAPTRELAKQIHEIAVQLASHLENNQFSIQLCIGGVSTKIDVSNIQSQGANILIATP 144
Query: 60 GRLYDIM---ERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
G+L ++M E D L FRNLEIL++DEADRL+D + + ++Y + +LPK RRTGLFSAT
Sbjct: 145 GKLKELMDMKELEDSLIFRNLEILIMDEADRLMDTEYYEDMTYALEKLPKQRRTGLFSAT 204
Query: 117 QTEA-VEELSKAGLRNPVRVEVR 138
+ A + EL K GLRNPV+V V+
Sbjct: 205 LSSAKLSELIKYGLRNPVKVSVK 227
>gi|189239797|ref|XP_970261.2| PREDICTED: similar to DEAD box ATP-dependent RNA helicase
[Tribolium castaneum]
Length = 734
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 102/160 (63%), Gaps = 21/160 (13%)
Query: 2 GMIISPTRELSSQIYHV----------AQP-----FISTLPDVKSVLLVGGVEVKADVKK 46
+IISPTREL++QI V ++P F + S+LLVGG V+ D+
Sbjct: 221 ALIISPTRELATQINQVLNQLLESISVSEPWGKSRFYVFFQGITSLLLVGGNSVEEDLNN 280
Query: 47 IEEEGANLLIGTPGRLYDIMERMD----VLDFRNLEILVLDEADRLLDMGFQKQISYIIS 102
++ G N++I TPGR D++ R L +NLEIL+LDEADRLLD GF+K + I+S
Sbjct: 281 LKCNGGNIIICTPGRFEDLLSRKSDFNLTLALKNLEILILDEADRLLDYGFRKSLDVILS 340
Query: 103 RLPKLRRTGLFSATQTEAVEELSKAGLRNP--VRVEVRAE 140
LPK RRTGLFSATQT+ +++L +AGLRNP V V V+AE
Sbjct: 341 YLPKQRRTGLFSATQTKQLQDLIRAGLRNPVLVSVSVKAE 380
>gi|384493001|gb|EIE83492.1| hypothetical protein RO3G_08197 [Rhizopus delemar RA 99-880]
Length = 600
Score = 132 bits (331), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 108/171 (63%), Gaps = 12/171 (7%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSV---LLVGGVEVKA-DVKKIEEEGANLLIG 57
+II+PTREL+ QI+ V FI + L +GG A D+ + + +LIG
Sbjct: 54 AIIITPTRELAQQIHTVFNNFIEDHERKDQIVCGLFIGGTTTLAEDITSFKRDCPRILIG 113
Query: 58 TPGRLYDIMERM-DVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
TPGRL +++ + ++ + LE+LV+DEADRLLDMGF KQI+ II+ LPK RRTGLFSAT
Sbjct: 114 TPGRLEELLTKSGQTVNTKELEVLVMDEADRLLDMGFSKQINTIIAYLPKQRRTGLFSAT 173
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVI 167
T+A+ EL +AGLRNPVR+ V+ E S+ + A +TP L ++ +
Sbjct: 174 MTDAISELIRAGLRNPVRIVVKVEDLSN-------KGAVQRTPSTLEIDYL 217
>gi|348688757|gb|EGZ28571.1| hypothetical protein PHYSODRAFT_309392 [Phytophthora sojae]
Length = 658
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 106/159 (66%), Gaps = 10/159 (6%)
Query: 1 MGMIISPTRELSSQIYHVAQPFIS-TLPDVKSVLLVGGVEVKADVKKIEEEGA----NLL 55
+ M+ISPTREL+ QI+ A+ F++ LP V+ +L VGG V D+ I GA +++
Sbjct: 86 VAMVISPTRELARQIFECAEKFVAHALPSVQLLLFVGGTSVDEDLSLIR--GAVGKCSVV 143
Query: 56 IGTPGRLYDIMERM--DVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLF 113
IGTPGR D++ R ++ R E+L+LDEAD LLDMGF+ ++ I+ LPK RRTGLF
Sbjct: 144 IGTPGRTEDLLNRCVGSSVETREFEMLILDEADTLLDMGFEVSLNKILEHLPKQRRTGLF 203
Query: 114 SATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQ 152
SATQT+ V+ L++AGLRNP + V+ + + V+ S+ Q
Sbjct: 204 SATQTQEVKALARAGLRNPATISVQVANNT-QVTPSTLQ 241
>gi|261331578|emb|CBH14572.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma brucei
gambiense DAL972]
Length = 771
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 99/155 (63%), Gaps = 14/155 (9%)
Query: 1 MGMIISPTRELSSQIYHVAQPFI-----------STLPDVKSVLLVGGVEVKADVKKIEE 49
+ +I+ P+REL+ Q++ +A+ + + LP +GG ++K DV
Sbjct: 160 VSVIVLPSRELAQQVHQLAKKMLHYVSYDYLGGKNGLPKYSCQCYIGGRDIKLDVDMFSR 219
Query: 50 EGANLLIGTPGRLYDIM---ERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPK 106
G N+LIGTPGRLY+++ + + + + E+L+LDEADRLL+ GF+ ++ I+ RLPK
Sbjct: 220 TGGNVLIGTPGRLYELLVSSKHSGLFNLTSFELLILDEADRLLEFGFKAKLDAILKRLPK 279
Query: 107 LRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAES 141
RRTGLFSATQT+ + EL++AG+RNPV V VR S
Sbjct: 280 QRRTGLFSATQTKELAELARAGMRNPVSVAVRVNS 314
>gi|71745486|ref|XP_827373.1| ATP-dependent DEAD/H RNA helicase [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|70831538|gb|EAN77043.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 795
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 99/155 (63%), Gaps = 14/155 (9%)
Query: 1 MGMIISPTRELSSQIYHVAQPFI-----------STLPDVKSVLLVGGVEVKADVKKIEE 49
+ +I+ P+REL+ Q++ +A+ + + LP +GG ++K DV
Sbjct: 184 VSVIVLPSRELAQQVHQLAKKMLHYVSYDYLGGKNGLPKYSCQCYIGGRDIKLDVDMFSR 243
Query: 50 EGANLLIGTPGRLYDIM---ERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPK 106
G N+LIGTPGRLY+++ + + + + E+L+LDEADRLL+ GF+ ++ I+ RLPK
Sbjct: 244 TGGNVLIGTPGRLYELLVSSKHSGLFNLTSFELLILDEADRLLEFGFKAKLDAILKRLPK 303
Query: 107 LRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAES 141
RRTGLFSATQT+ + EL++AG+RNPV V VR S
Sbjct: 304 QRRTGLFSATQTKELAELARAGMRNPVSVAVRVNS 338
>gi|302783497|ref|XP_002973521.1| hypothetical protein SELMODRAFT_99934 [Selaginella moellendorffii]
gi|300158559|gb|EFJ25181.1| hypothetical protein SELMODRAFT_99934 [Selaginella moellendorffii]
Length = 539
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 102/151 (67%), Gaps = 4/151 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEE-EGANLLIGTPG 60
++++PTREL+SQI+ V++PF + L + VLLVGG +V DV IE+ A L+GTPG
Sbjct: 77 AIVVAPTRELASQIFDVSRPFFAGLNEFDPVLLVGGADVSLDVSSIEKCPRAKFLVGTPG 136
Query: 61 RLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTE 119
RL DIM+R LDF +L++L+LDEADRLL+MG ++S IIS LP R TGLFSAT+T+
Sbjct: 137 RLLDIMQRCSSHLDFSSLKVLILDEADRLLEMGHDHRVSEIISLLPGQRITGLFSATETK 196
Query: 120 AVEELSKAGLRNPVRVEVRAESKSHHVSASS 150
E KAG+R + + ++ S S +S
Sbjct: 197 --ELAVKAGVRQEYSFQTKKQTPSTLSSTNS 225
>gi|302787567|ref|XP_002975553.1| hypothetical protein SELMODRAFT_103968 [Selaginella moellendorffii]
gi|300156554|gb|EFJ23182.1| hypothetical protein SELMODRAFT_103968 [Selaginella moellendorffii]
Length = 542
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/144 (49%), Positives = 100/144 (69%), Gaps = 4/144 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEE-EGANLLIGTPG 60
++++PTREL+SQI+ V++PF + L + VLLVGG +V DV IE A +L+GTPG
Sbjct: 77 AIVVAPTRELASQIFDVSRPFFAGLNEFDPVLLVGGADVSLDVSSIENCPRAKVLVGTPG 136
Query: 61 RLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTE 119
RL DIM+R LDF +L++L+LDEADRLL+MG +++S IIS LP R TGLFSAT+T+
Sbjct: 137 RLLDIMQRCSSHLDFSSLKVLILDEADRLLEMGHDRRVSEIISLLPGQRITGLFSATETK 196
Query: 120 AVEELSKAGLRNPVRVEVRAESKS 143
E KAG+R + + ++ S
Sbjct: 197 --ELAVKAGVRQEYSFQTKKQTPS 218
>gi|195060817|ref|XP_001995865.1| GH14140 [Drosophila grimshawi]
gi|193891657|gb|EDV90523.1| GH14140 [Drosophila grimshawi]
Length = 621
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 101/147 (68%), Gaps = 7/147 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFIS--TLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTP 59
+IISPTREL+ QI+ V F++ L + LLVGG ++ D+ + E +L+ TP
Sbjct: 85 AIIISPTRELARQIHEVLGKFMAHPQLEQFRQQLLVGGNHIEEDIVALRRETPCILVCTP 144
Query: 60 GRLYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFS 114
GRL D+++R D L ++LE LVLDEADRLLD+GF++ IS+I++ LP+ RRTGLFS
Sbjct: 145 GRLEDLLQRKADDLQLTSRVKSLEFLVLDEADRLLDLGFKQSISHILAYLPRQRRTGLFS 204
Query: 115 ATQTEAVEELSKAGLRNPVRVEVRAES 141
ATQT V +L +AGLRNPV V V+ ++
Sbjct: 205 ATQTTEVTDLIRAGLRNPVLVSVKEKA 231
>gi|154345123|ref|XP_001568503.1| putative ATP-dependent RNA helicase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065840|emb|CAM43618.1| putative ATP-dependent RNA helicase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 691
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 107/170 (62%), Gaps = 17/170 (10%)
Query: 1 MGMIISPTRELSSQIYHVAQPFI-------------STLPDVKSVLLVGGVEVKADVKKI 47
+++ P+REL+ Q++ + + + + LP +GG +++ DV++
Sbjct: 79 FAVLVLPSRELAQQVFQIVKRMLHFVTKGYKNGTPANGLPAYSYQCFIGGRDIQRDVEEF 138
Query: 48 EEEGANLLIGTPGRLYDIM---ERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRL 104
++G N+L+GTPGRLY+++ + + +F E+L+LDEAD+LL+ GF+ ++ I+ RL
Sbjct: 139 CKQGGNVLVGTPGRLYELLVSSKYASLFNFSQFELLILDEADKLLEFGFRAKLDAILKRL 198
Query: 105 PKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAES-KSHHVSASSQQL 153
PK RRTGLFSATQT+ + EL++AG+RNPV V VR S S +V + Q+
Sbjct: 199 PKQRRTGLFSATQTKELAELARAGMRNPVSVTVRINSLNSANVDTAKPQI 248
>gi|301118004|ref|XP_002906730.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262108079|gb|EEY66131.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 661
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 102/158 (64%), Gaps = 9/158 (5%)
Query: 1 MGMIISPTRELSSQIYHVAQPFIS-TLPDVKSVLLVGGVEVKADVKKIEEEGA----NLL 55
+ M+ISPTREL+ QI+ A+ F + L V+ +L VGG V D+ I GA +++
Sbjct: 86 VAMVISPTRELARQIFECAEKFFARALSTVQLLLFVGGTSVDEDLSLIR--GAVGKCSVV 143
Query: 56 IGTPGRLYDIMERM--DVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLF 113
IGTPGR D++ R ++ R EIL+LDEAD LLDMGF+ ++ I+ LPK RRTGLF
Sbjct: 144 IGTPGRTEDLLNRCVGSSVETREFEILILDEADTLLDMGFEVSLNKILEHLPKQRRTGLF 203
Query: 114 SATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQ 151
SATQT+ V+ L++AGLRNP + V+ + + A+ Q
Sbjct: 204 SATQTQEVKALARAGLRNPATISVQVANNTQITPATLQ 241
>gi|340056347|emb|CCC50678.1| putative ATP-dependent RNA helicase [Trypanosoma vivax Y486]
Length = 705
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 105/173 (60%), Gaps = 18/173 (10%)
Query: 1 MGMIISPTRELSSQIYHVAQPFI-----------STLPDVKSVLLVGGVEVKADVKKIEE 49
+ +I+ P+REL+ Q++ + + + S LP +GG ++ DV + +
Sbjct: 90 VSIIVLPSRELAQQVHKITKGMLHYVSSTYAKGASGLPKYSCQCYIGGRDIALDVDQFTK 149
Query: 50 EGANLLIGTPGRLYDIM---ERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPK 106
G N++IGTPGRL+++ + + +F E+L+LDEADRLL+ GF+ ++ I+ RLPK
Sbjct: 150 NGGNVVIGTPGRLFELFVSSKYSSLFNFSCFELLILDEADRLLEFGFKAKLDAILKRLPK 209
Query: 107 LRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTP 159
RRTGLFSATQT+ + EL++AG+RNPV V VR S ++S+ A + P
Sbjct: 210 QRRTGLFSATQTKELTELARAGMRNPVSVTVRVNS----ANSSTNDTAKPQVP 258
>gi|401429832|ref|XP_003879398.1| putative ATP-dependent RNA helicase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495648|emb|CBZ30954.1| putative ATP-dependent RNA helicase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 690
Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 100/154 (64%), Gaps = 16/154 (10%)
Query: 1 MGMIISPTRELSSQIYHVAQPFI-------------STLPDVKSVLLVGGVEVKADVKKI 47
+++ P+REL+ Q++H+ + + + LP +GG ++K DV++
Sbjct: 79 FAVLVLPSRELAQQVFHIVKRMLHFVTKSYKNGSPANGLPAYSYQCYIGGRDIKHDVEEF 138
Query: 48 EEEGANLLIGTPGRLYDIM---ERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRL 104
++G N+L+GTPGRLY+++ + ++ E+L+LDEAD+LL+ GF+ ++ ++ RL
Sbjct: 139 SKQGGNVLVGTPGRLYELLVSSKYANLFHLSQFELLILDEADKLLEFGFRAKLDALLKRL 198
Query: 105 PKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVR 138
PK RRTGLFSATQT+ + EL++AG+RNPV V VR
Sbjct: 199 PKQRRTGLFSATQTKELTELARAGMRNPVSVTVR 232
>gi|281208999|gb|EFA83174.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 652
Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 96/155 (61%), Gaps = 28/155 (18%)
Query: 3 MIISPTRELSSQIYHVAQPFIS-------TLPD-------------------VKSVLLVG 36
+IISPTREL++Q + V Q FIS T P + S+LL+G
Sbjct: 87 IIISPTRELATQTFQVLQKFISPEIATHLTAPSSTLSTNESDESDEPSFKQILTSILLIG 146
Query: 37 GVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV--LDFRNLEILVLDEADRLLDMGFQ 94
G + D+++ EG N+++GTPGR+ + M R+D L + E+L+LDEADRLLDMGF
Sbjct: 147 GTPIYDDIQRFNREGGNIIVGTPGRIDEFMSRIDKDQLKVKQFEVLILDEADRLLDMGFH 206
Query: 95 KQISYIISRLPKLRRTGLFSATQTEAVEELSKAGL 129
I+ I++R+PK RRTGLFSATQT V+EL++ G+
Sbjct: 207 LTINSILNRIPKQRRTGLFSATQTSDVKELARTGV 241
>gi|430813773|emb|CCJ28898.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 568
Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 101/143 (70%), Gaps = 6/143 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFIS----TLPDVKSVLLVGGV-EVKADVKKIEEEGANLLI 56
+I+ PTREL++QIYHV + + T ++++ L++GGV ++ D+ + ++ +++I
Sbjct: 128 SLIVLPTRELATQIYHVYETIMKMSEETDLNLRAQLVIGGVMTIQHDISEFDKLSPSIII 187
Query: 57 GTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
GTPGR+ D + ++ + LEILV+DEADRLLDMGF I II +LPK RRTGLFSAT
Sbjct: 188 GTPGRIDDFLSS-SIVKTKELEILVMDEADRLLDMGFLPTIESIIRKLPKQRRTGLFSAT 246
Query: 117 QTEAVEELSKAGLRNPVRVEVRA 139
T+AV++L + GLRNPV++ VR
Sbjct: 247 MTDAVDKLIRTGLRNPVKIVVRV 269
>gi|224001628|ref|XP_002290486.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973908|gb|EED92238.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 589
Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 104/161 (64%), Gaps = 4/161 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKA---DVKKIEEEGANLLIGT 58
+++ PTREL+ Q + V + + +LLVGG V A D+++ ++ ++++IGT
Sbjct: 79 ALVLEPTRELARQTFSVCRDLCGECGMNEPLLLVGGASVSAVAHDLQQFQKLKSDIVIGT 138
Query: 59 PGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQT 118
PGR+ D++ R D +D LE+L+LDE+D LLDMGF+ ++ I+SRLP++RRTGLFSAT T
Sbjct: 139 PGRVEDVLTRFDNIDVSELEVLILDESDVLLDMGFEVTLTSILSRLPRMRRTGLFSATNT 198
Query: 119 EAVEELS-KAGLRNPVRVEVRAESKSHHVSASSQQLASSKT 158
V++L K+G+RNPV V+V + S Q SS T
Sbjct: 199 SGVKKLCVKSGMRNPVVVDVAVSAIVKSKGNSQQATPSSLT 239
>gi|407408274|gb|EKF31780.1| ATP-dependent RNA helicase, putative [Trypanosoma cruzi
marinkellei]
Length = 712
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 100/155 (64%), Gaps = 14/155 (9%)
Query: 1 MGMIISPTRELSSQIYHVAQP---FIS--------TLPDVKSVLLVGGVEVKADVKKIEE 49
+ +++ P+REL+ Q++ +A+ F+S LP +GG ++ DV +
Sbjct: 90 VSIVVLPSRELAQQVHLLAKKMLHFVSHVHAGGKAGLPKYSCQCYIGGRDITVDVNMFNK 149
Query: 50 EGANLLIGTPGRLYDIM---ERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPK 106
G +LLIGTPGRLY+++ + + +F E+LVLDEAD+LL+ GF+ ++ I+ RLPK
Sbjct: 150 AGGHLLIGTPGRLYELLVSSKYTSLFNFSGFELLVLDEADKLLEFGFRAKLDAILKRLPK 209
Query: 107 LRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAES 141
RRTGLFSATQT+ + EL++AG+RNPV V VR S
Sbjct: 210 QRRTGLFSATQTKELAELARAGMRNPVSVTVRVGS 244
>gi|393242092|gb|EJD49611.1| DEAD-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 660
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 108/174 (62%), Gaps = 13/174 (7%)
Query: 3 MIISPTRELSSQIYHVAQPFI---STLPDVKS-----VLLVGGVEV--KADVKKIEEEGA 52
++ISPTREL+ QI+ V F+ +T D S +LLV G DV + E GA
Sbjct: 89 LVISPTRELAEQIHSVFSLFLDSQATDEDDASHLRPPLLLVSGTASTPSQDVARFVETGA 148
Query: 53 NLLIGTPGRLYDIM--ERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRT 110
+++IGTPGR+ + + + DV+ + LE+LVLDEADRLLD+GF ++ I+ LPK RRT
Sbjct: 149 DIIIGTPGRVEEFLLGKGKDVVSVKELEVLVLDEADRLLDLGFTAVLTRILGHLPKQRRT 208
Query: 111 GLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASS-KTPLGLH 163
GLFSAT T+A+ EL +AGLRNPVRV V+ E+K + L +TP L
Sbjct: 209 GLFSATMTDALSELVRAGLRNPVRVVVKVEAKRGTKRKADDALVDERRTPASLQ 262
>gi|71659794|ref|XP_821617.1| ATP-dependent RNA helicase [Trypanosoma cruzi strain CL Brener]
gi|70887001|gb|EAN99766.1| ATP-dependent RNA helicase, putative [Trypanosoma cruzi]
Length = 762
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 99/155 (63%), Gaps = 14/155 (9%)
Query: 1 MGMIISPTRELSSQIY-----------HVAQPFISTLPDVKSVLLVGGVEVKADVKKIEE 49
+ +++ P+REL+ Q++ HV + LP+ +GG ++ DV ++
Sbjct: 140 VSIVVLPSRELAQQVHLLAKKMLHFVSHVHADGTAGLPNYSCQCYIGGRDITVDVNMFKK 199
Query: 50 EGANLLIGTPGRLYDIM---ERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPK 106
G ++L+GTPGRLY+++ + + +F E+LVLDEAD+LL+ GF+ ++ I+ RLPK
Sbjct: 200 AGGHVLVGTPGRLYELLVSSKYTSLFNFSGFELLVLDEADKLLEFGFRAKLDAILKRLPK 259
Query: 107 LRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAES 141
RRTGLFSATQT+ + EL++AG+RNPV V VR S
Sbjct: 260 QRRTGLFSATQTKELAELARAGMRNPVSVTVRVGS 294
>gi|358255235|dbj|GAA56957.1| ATP-dependent RNA helicase DDX55/SPB4, partial [Clonorchis
sinensis]
Length = 1451
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 104/180 (57%), Gaps = 20/180 (11%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVG------------GVEVKADVKKIEE 49
+IISPT EL+ Q++ V +++ D S L D + +
Sbjct: 49 ALIISPTSELALQLFEVTSKLLASYVDESSNALFTSLVWTGGGGSGGATTRAQDFENFQT 108
Query: 50 EGANLLIGTPGRLYDIMERMD-------VLDFRNLEILVLDEADRLLDMGFQKQISYIIS 102
+GA +LI TPGRL D +++ V FR+LE+L+LDEADRLL+MGF+ Q++ ++S
Sbjct: 109 QGATVLIATPGRLVDTVQQGAQRTSNPIVRGFRSLEVLILDEADRLLEMGFETQLNILLS 168
Query: 103 RLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGL 162
LPK RRTGLFSATQT VE+L +AGLRNPVRV VR E H + S L +TP L
Sbjct: 169 LLPKQRRTGLFSATQTSQVEDLLRAGLRNPVRVVVR-EQIDHTNAVSKALLTGQRTPATL 227
>gi|313234797|emb|CBY24742.1| unnamed protein product [Oikopleura dioica]
Length = 582
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 102/145 (70%), Gaps = 3/145 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGV-EVKADVKKIEEEGANLLIGTPGR 61
+++SPTREL+ Q + V F+ L ++ +GGV +++ D++ +E +++I TPGR
Sbjct: 85 IVVSPTRELAQQTHRVLMRFLDKLESYTAMTCIGGVTKIQEDMETLETSTPDVIIATPGR 144
Query: 62 LYDIMERMDVLD--FRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTE 119
+ D+++R D+L + +E+L++DEAD++LD+GF+K I++I+S LPK RRTGLFSAT E
Sbjct: 145 IDDLIKRSDILKAKLKTVEMLIIDEADQILDIGFEKAINFILSNLPKQRRTGLFSATLNE 204
Query: 120 AVEELSKAGLRNPVRVEVRAESKSH 144
V L KAGLRNP V V+ +++ +
Sbjct: 205 NVLRLKKAGLRNPHSVSVKEKAREN 229
>gi|407847519|gb|EKG03207.1| ATP-dependent RNA helicase, putative [Trypanosoma cruzi]
Length = 762
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 101/155 (65%), Gaps = 14/155 (9%)
Query: 1 MGMIISPTRELSSQIYHVAQP---FIS--------TLPDVKSVLLVGGVEVKADVKKIEE 49
+ +++ P+REL+ Q++ +A+ F+S LP+ +GG ++ DV +
Sbjct: 140 VSIVVLPSRELAQQVHLLAKKMLHFVSHVHADGKAGLPNYSCQCYIGGRDITVDVNMFNK 199
Query: 50 EGANLLIGTPGRLYDIM---ERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPK 106
G ++L+GTPGRLY+++ + + +F E+LVLDEAD+LL+ GF+ ++ I+ RLPK
Sbjct: 200 AGGHVLVGTPGRLYELLVSSKYTSLFNFSGFELLVLDEADKLLEFGFRAKLDAILKRLPK 259
Query: 107 LRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAES 141
RRTGLFSATQT+ + EL++AG+RNPV V VR S
Sbjct: 260 QRRTGLFSATQTKELAELARAGMRNPVSVTVRVGS 294
>gi|391334828|ref|XP_003741802.1| PREDICTED: ATP-dependent RNA helicase DDX55-like [Metaseiulus
occidentalis]
Length = 565
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 98/143 (68%), Gaps = 8/143 (5%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEE-EGANLLIGTPG 60
+I+SPTREL+ Q + V + P ++ L+ GG ++ DV+K E+ GA++++GTPG
Sbjct: 89 ALIVSPTRELAQQTHQVIKSL--KFPQIRCQLVTGGHSIQKDVEKFEKMGGAHIVVGTPG 146
Query: 61 RLYDIMERMDVLD-----FRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
RL D++ + + RNLEIL+LDEADRLL++GF + I++ LPK RRT LFSA
Sbjct: 147 RLADVLSARNANNNLCRYSRNLEILILDEADRLLELGFDLTLGNILAVLPKQRRTALFSA 206
Query: 116 TQTEAVEELSKAGLRNPVRVEVR 138
TQT+ +++L +AGLRNPV V V+
Sbjct: 207 TQTKQLDDLKRAGLRNPVTVSVK 229
>gi|398023649|ref|XP_003864986.1| ATP-dependent RNA helicase, putative [Leishmania donovani]
gi|322503222|emb|CBZ38307.1| ATP-dependent RNA helicase, putative [Leishmania donovani]
Length = 690
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 100/157 (63%), Gaps = 16/157 (10%)
Query: 1 MGMIISPTRELSSQIYHVAQPFI-------------STLPDVKSVLLVGGVEVKADVKKI 47
+++ P+REL+ Q++ + + + + LP +GG ++K DV++
Sbjct: 79 FAVLVLPSRELAQQVFQIVKRMLHFVTKEYKNGSPANGLPAYSYQCYIGGRDIKHDVEEF 138
Query: 48 EEEGANLLIGTPGRLYDIM---ERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRL 104
++G N+L+GTPGRLY+++ + ++ E+L+LDEAD+LL+ GF+ ++ ++ RL
Sbjct: 139 SKQGGNVLVGTPGRLYELLVSSKHANLFHLSQFELLILDEADKLLEFGFRAKLDALLKRL 198
Query: 105 PKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAES 141
PK RRTGLFSATQT+ + EL++AG+RNPV V VR S
Sbjct: 199 PKQRRTGLFSATQTKELTELARAGMRNPVSVTVRINS 235
>gi|146101806|ref|XP_001469210.1| putative ATP-dependent RNA helicase [Leishmania infantum JPCM5]
gi|134073579|emb|CAM72313.1| putative ATP-dependent RNA helicase [Leishmania infantum JPCM5]
Length = 690
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 100/157 (63%), Gaps = 16/157 (10%)
Query: 1 MGMIISPTRELSSQIYHVAQPFI-------------STLPDVKSVLLVGGVEVKADVKKI 47
+++ P+REL+ Q++ + + + + LP +GG ++K DV++
Sbjct: 79 FAVLVLPSRELAQQVFQIVKRMLHFVTKEYKNGSPANGLPAYSYQCYIGGRDIKHDVEEF 138
Query: 48 EEEGANLLIGTPGRLYDIM---ERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRL 104
++G N+L+GTPGRLY+++ + ++ E+L+LDEAD+LL+ GF+ ++ ++ RL
Sbjct: 139 SKQGGNVLVGTPGRLYELLVSSKHANLFHLSQFELLILDEADKLLEFGFRAKLDALLKRL 198
Query: 105 PKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAES 141
PK RRTGLFSATQT+ + EL++AG+RNPV V VR S
Sbjct: 199 PKQRRTGLFSATQTKELTELARAGMRNPVSVTVRINS 235
>gi|164660158|ref|XP_001731202.1| hypothetical protein MGL_1385 [Malassezia globosa CBS 7966]
gi|159105102|gb|EDP43988.1| hypothetical protein MGL_1385 [Malassezia globosa CBS 7966]
Length = 663
Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats.
Identities = 71/147 (48%), Positives = 94/147 (63%), Gaps = 7/147 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSV----LLVGGVEVKA--DVKKIEEEGANLL 55
+++ PTREL+ Q V Q F+ P + L VGG V D++ E G ++L
Sbjct: 89 AVVVCPTRELAQQTAGVVQRFLDAKPATSKLHGMQLCVGGTGVSPADDLQYFREHGPDIL 148
Query: 56 IGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
IGTPGR+ ++++R V L++LV+DEADRLLD+GF I +IS LPK RRTGLFSA
Sbjct: 149 IGTPGRMEELLKRPGV-KTSELDVLVMDEADRLLDLGFTNVIRSLISYLPKQRRTGLFSA 207
Query: 116 TQTEAVEELSKAGLRNPVRVEVRAESK 142
T TEA+ EL + GLRNPVRV V+ E K
Sbjct: 208 TMTEALSELVRVGLRNPVRVVVKVEYK 234
>gi|383858854|ref|XP_003704914.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 [Megachile
rotundata]
Length = 786
Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 110/175 (62%), Gaps = 7/175 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QIY + I D + L++GG ++K + K++++ N++I TPGR
Sbjct: 114 ALIITPTRELAYQIYETLRK-IGQFHDFSAGLIIGGKDLKFEKKRVDQ--CNIIICTPGR 170
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + D N+++LVLDEADR LDMGFQ+ ++ II LP R+T LFSATQT +V
Sbjct: 171 LLQHMDENPLFDCVNMQVLVLDEADRCLDMGFQQTMNSIIENLPSKRQTLLFSATQTRSV 230
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
++L++ L++P+ V V + H + + Q + PL L ++W+ +RNH
Sbjct: 231 KDLARLSLKDPMYVSVHEH--ATHTTPEALQQSYIICPLEDKLSMLWSF--IRNH 281
>gi|257215828|emb|CAX83066.1| ATP-dependent RNA helicase DDX55 [Schistosoma japonicum]
Length = 551
Score = 125 bits (313), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 107/185 (57%), Gaps = 23/185 (12%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLP----DVKSVLLVG-----GVEVKA-DVKKIEEEG 51
+I+SPT EL+ QIY + FI + + +++ G G K D K +E G
Sbjct: 81 ALILSPTCELAIQIYEIVLHFIKFINKNEYNFSALVFTGSGRSSGPTTKFHDFNKFKENG 140
Query: 52 ANLLIGTPGRLYDIMERMDVLDF-------------RNLEILVLDEADRLLDMGFQKQIS 98
+ +L+ TPGRL D++ V++F R++EIL+LDEADRLL+MGF+ QI+
Sbjct: 141 SVILVSTPGRLTDLILTGTVVNFGLGNMANPIIRGLRSVEILILDEADRLLEMGFESQIN 200
Query: 99 YIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKT 158
I+S LPK RRTGLFSATQT VE+L +AGLRNPVRV V ++ S + + +
Sbjct: 201 TILSFLPKQRRTGLFSATQTTRVEDLVRAGLRNPVRVTVSQQTVGELESMNKNKSLQQRV 260
Query: 159 PLGLH 163
P L
Sbjct: 261 PSSLQ 265
>gi|389595151|ref|XP_003722798.1| putative ATP-dependent RNA helicase [Leishmania major strain
Friedlin]
gi|323364026|emb|CBZ13032.1| putative ATP-dependent RNA helicase [Leishmania major strain
Friedlin]
Length = 690
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 99/154 (64%), Gaps = 16/154 (10%)
Query: 1 MGMIISPTRELSSQIYHVAQPFI-------------STLPDVKSVLLVGGVEVKADVKKI 47
+++ P+REL+ Q++ + + + + LP +GG ++K DV++
Sbjct: 79 FAVLVLPSRELAQQVFQIVKRMLHFVTKGYKNGSPANGLPAYSYQCYIGGRDIKHDVEEF 138
Query: 48 EEEGANLLIGTPGRLYDIM---ERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRL 104
++G N+L+GTPGRLY+++ + ++ E+L+LDEAD+LL+ GF+ ++ ++ RL
Sbjct: 139 SKQGGNVLVGTPGRLYELLVSSKYANLFHLSQFELLILDEADKLLEFGFRAKLDALLKRL 198
Query: 105 PKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVR 138
P+ RRTGLFSATQT+ + EL++AG+RNPV V VR
Sbjct: 199 PRQRRTGLFSATQTKELAELARAGMRNPVSVTVR 232
>gi|195113343|ref|XP_002001227.1| GI10673 [Drosophila mojavensis]
gi|193917821|gb|EDW16688.1| GI10673 [Drosophila mojavensis]
Length = 610
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 99/147 (67%), Gaps = 7/147 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFIS--TLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTP 59
+IISPTREL+ QI V F++ L + L+VGG ++ D+ ++++ +L+ TP
Sbjct: 85 ALIISPTRELARQISEVLAQFLAHEQLEHLNQQLIVGGNSIEEDIAALKQQSPCILVCTP 144
Query: 60 GRLYDIMERM-DVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFS 114
GRL D+ +R D L+ ++LE LVLDEADRLLD+GF+ ++ I+ LP+ RRTGLFS
Sbjct: 145 GRLEDLFQRKGDDLNLASRVKSLEFLVLDEADRLLDLGFKTSVNNILGYLPRQRRTGLFS 204
Query: 115 ATQTEAVEELSKAGLRNPVRVEVRAES 141
ATQT V +L +AGLRNPV V V+ ++
Sbjct: 205 ATQTTEVTDLIRAGLRNPVLVSVKEKA 231
>gi|397590755|gb|EJK55144.1| hypothetical protein THAOC_25148 [Thalassiosira oceanica]
Length = 666
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 104/165 (63%), Gaps = 11/165 (6%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGG--------VEVKADVKKIEEEGAN 53
+I+ PTREL+ Q + V + + + +LLVGG V D+ + + ++
Sbjct: 95 ALILEPTRELARQTFGVCRDLCQSCGINEPLLLVGGGGSKGASVSAVSYDLAQFAKLQSD 154
Query: 54 LLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLF 113
+++GTPGR+ D++ R D +D +E+L+LDE+D LLDMGF+ ++ I+SRLP++RRTGLF
Sbjct: 155 IIVGTPGRVEDVLTRYDNIDVSEMEVLILDESDVLLDMGFEVTLTSILSRLPRMRRTGLF 214
Query: 114 SATQTEAVEELS-KAGLRNPVRVEV--RAESKSHHVSASSQQLAS 155
SAT T V+ L K+G+RNPV V+V +E H + A Q+ A+
Sbjct: 215 SATNTSGVKRLCVKSGMRNPVVVDVAINSEQNEHEMQAKDQKQAT 259
>gi|393220375|gb|EJD05861.1| DEAD-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 664
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 103/163 (63%), Gaps = 22/163 (13%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKS--------------------VLLVGGVEVK 41
++ISPTREL+SQI+ V + F+++ P S +
Sbjct: 86 ALVISPTRELASQIHSVFELFLNSQPKNASSGTDEDNPESRDDLLPPPLLLTSSADSSPA 145
Query: 42 ADVKKIEEEGANLLIGTPGRLYDIM--ERMDVLDFRNLEILVLDEADRLLDMGFQKQISY 99
DV++ + GA+++IGTPGR+ + + + DV++ + LE+LVLDEADRLLD+GF + ++
Sbjct: 146 EDVRRFLDTGADIVIGTPGRIEEFLLGKGRDVVNVKELEVLVLDEADRLLDLGFTQCLTR 205
Query: 100 IISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESK 142
I++ LPK RRTGLFSAT T+A+ EL + GLRNPVRV V+ E+K
Sbjct: 206 ILAALPKQRRTGLFSATMTDALSELVRVGLRNPVRVVVKVEAK 248
>gi|353234870|emb|CCA66890.1| related to SPB4-ATP-dependent RNA helicase of DEAH box family
[Piriformospora indica DSM 11827]
Length = 641
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 101/152 (66%), Gaps = 14/152 (9%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLP-DV---KSVLLVGGVEVKA--DVKKIEEEGANLL 55
+I+SPTREL++QI V F+ P DV +SVL+V G E D+ + E A+++
Sbjct: 89 ALIVSPTRELATQINSVLSKFVDAAPEDVSCPRSVLMVSGTESTPAQDLSRFLESSADIV 148
Query: 56 IGTPGRLYDIM-----ERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRT 110
IGTPGR+ + + R+ V + LE+LV DEADRLLD+GF I+ II+ LPK RRT
Sbjct: 149 IGTPGRIEEFLLGRGGNRVSV---KELEVLVFDEADRLLDLGFTTTITRIITHLPKQRRT 205
Query: 111 GLFSATQTEAVEELSKAGLRNPVRVEVRAESK 142
GLFSAT T+A+ EL + GLRNPVRV V+ E+K
Sbjct: 206 GLFSATMTDALSELVRMGLRNPVRVTVKVEAK 237
>gi|195444362|ref|XP_002069832.1| GK11359 [Drosophila willistoni]
gi|194165917|gb|EDW80818.1| GK11359 [Drosophila willistoni]
Length = 613
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/149 (45%), Positives = 96/149 (64%), Gaps = 9/149 (6%)
Query: 2 GMIISPTRELSSQIYHVAQPFIS--TLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTP 59
+IISPTREL+ QI V F++ L + L+VGG ++ D+ ++ + +L+ TP
Sbjct: 85 ALIISPTRELARQISDVLGQFLAHEELDYLNQQLIVGGNSIEEDIAMLKRDSPCILVSTP 144
Query: 60 GRLYDIMERMDVLD-------FRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGL 112
GRL D+ +R D ++LE LVLDEADRLLD+GF+ I+ I+ LP+ RRTGL
Sbjct: 145 GRLEDLFQRKGAADDLNLAARVKSLEFLVLDEADRLLDLGFKTSINNILGYLPRQRRTGL 204
Query: 113 FSATQTEAVEELSKAGLRNPVRVEVRAES 141
FSATQT V +L +AGLRNPV V V+ ++
Sbjct: 205 FSATQTTEVTDLIRAGLRNPVLVSVKEKA 233
>gi|195390731|ref|XP_002054021.1| GJ23025 [Drosophila virilis]
gi|194152107|gb|EDW67541.1| GJ23025 [Drosophila virilis]
Length = 610
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 99/147 (67%), Gaps = 7/147 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFIS--TLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTP 59
+IISPTREL+ QI V F++ L + L+VGG ++ D+ ++++ +L+ TP
Sbjct: 85 ALIISPTRELARQISEVLAQFLAHDELEHLNQQLIVGGNSIEEDIAALKQQTPCILVCTP 144
Query: 60 GRLYDIMERM-DVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFS 114
GRL D+ +R D L+ ++LE LVLDEADRLLD+GF+ ++ I+ LP+ RRTGLFS
Sbjct: 145 GRLEDLFQRKGDDLNLAARVKSLEFLVLDEADRLLDLGFKTSVNNILGYLPRQRRTGLFS 204
Query: 115 ATQTEAVEELSKAGLRNPVRVEVRAES 141
ATQT V +L +AGLRNPV V V+ ++
Sbjct: 205 ATQTTEVTDLIRAGLRNPVLVSVKEKA 231
>gi|195145070|ref|XP_002013519.1| GL24181 [Drosophila persimilis]
gi|198452407|ref|XP_001358760.2| GA21925 [Drosophila pseudoobscura pseudoobscura]
gi|194102462|gb|EDW24505.1| GL24181 [Drosophila persimilis]
gi|198131920|gb|EAL27903.2| GA21925 [Drosophila pseudoobscura pseudoobscura]
Length = 609
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 98/147 (66%), Gaps = 7/147 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFIS--TLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTP 59
+IISPTREL+ QI V F++ L + L+VGG ++ D+ + +E +L+ TP
Sbjct: 85 ALIISPTRELARQISEVLAQFLAHEDLEHLNQQLIVGGNSIEEDIATLRKETPCILVCTP 144
Query: 60 GRLYDIMERM-DVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFS 114
GRL D+ +R D L+ ++LE LVLDEADRLLD+GF+ ++ I+ LP+ RRTGLFS
Sbjct: 145 GRLEDLFQRKGDDLNLAARVKSLEFLVLDEADRLLDLGFKTSVNNILGYLPRQRRTGLFS 204
Query: 115 ATQTEAVEELSKAGLRNPVRVEVRAES 141
ATQT V +L +AGLRNPV V V+ ++
Sbjct: 205 ATQTTEVTDLIRAGLRNPVLVSVKEKA 231
>gi|442752837|gb|JAA68578.1| Putative atp-dependent rna helicase [Ixodes ricinus]
Length = 453
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/106 (56%), Positives = 82/106 (77%), Gaps = 5/106 (4%)
Query: 43 DVKKIEEEGANLLIGTPGRLYDIMERMD-VLDF----RNLEILVLDEADRLLDMGFQKQI 97
D++ +E+GAN+++ TPGR+ D+ ER D +F ++LE+LVLDEADRLLDMGF+K +
Sbjct: 3 DIENFKEKGANIVVTTPGRMVDLFERKDDTFNFAANAKSLEVLVLDEADRLLDMGFEKSV 62
Query: 98 SYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKS 143
+ I+S LPK RRTGLFSATQT+ VE+L +AGLRNPV V V+ + S
Sbjct: 63 NTILSYLPKQRRTGLFSATQTKEVEDLIRAGLRNPVSVSVKEKQTS 108
>gi|194904067|ref|XP_001980995.1| GG17465 [Drosophila erecta]
gi|190652698|gb|EDV49953.1| GG17465 [Drosophila erecta]
Length = 613
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 97/147 (65%), Gaps = 7/147 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFIS--TLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTP 59
+IISPTREL+ QI V F+ L + L+VGG ++ D+ + +E +L+ TP
Sbjct: 85 ALIISPTRELARQISEVLAQFLEHEDLEHLNQQLIVGGNSIEEDIATLRKETPCILVCTP 144
Query: 60 GRLYDIMERM-DVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFS 114
GRL D+ +R D L+ ++LE LVLDEADRLLD+GF+ ++ I+ LP+ RRTGLFS
Sbjct: 145 GRLEDLFQRKGDDLNLAARVKSLEFLVLDEADRLLDLGFKTSVNNILGYLPRQRRTGLFS 204
Query: 115 ATQTEAVEELSKAGLRNPVRVEVRAES 141
ATQT V +L +AGLRNPV V V+ ++
Sbjct: 205 ATQTTEVTDLIRAGLRNPVLVSVKEKA 231
>gi|242001594|ref|XP_002435440.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
gi|215498776|gb|EEC08270.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
Length = 464
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/106 (56%), Positives = 82/106 (77%), Gaps = 5/106 (4%)
Query: 43 DVKKIEEEGANLLIGTPGRLYDIMERMD-VLDF----RNLEILVLDEADRLLDMGFQKQI 97
D++ +E+GAN+++ TPGR+ D+ ER D +F ++LE+LVLDEADRLLDMGF+K +
Sbjct: 3 DIENFKEKGANIVVTTPGRMVDMFERKDDTFNFAANTKSLEVLVLDEADRLLDMGFEKSV 62
Query: 98 SYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKS 143
+ I+S LPK RRTGLFSATQT+ VE+L +AGLRNPV V V+ + S
Sbjct: 63 NTILSYLPKQRRTGLFSATQTKEVEDLIRAGLRNPVSVSVKEKQTS 108
>gi|195572607|ref|XP_002104287.1| GD20881 [Drosophila simulans]
gi|194200214|gb|EDX13790.1| GD20881 [Drosophila simulans]
Length = 613
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 97/147 (65%), Gaps = 7/147 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFIS--TLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTP 59
+IISPTREL+ QI V F+ L + L+VGG ++ D+ + +E +L+ TP
Sbjct: 85 ALIISPTRELARQISEVLAQFLEHEDLEHLNQQLIVGGNSIEEDIATLRKETPCILVCTP 144
Query: 60 GRLYDIMERM-DVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFS 114
GRL D+ +R D L+ ++LE LVLDEADRLLD+GF+ ++ I+ LP+ RRTGLFS
Sbjct: 145 GRLEDLFQRKGDDLNLAARVKSLEFLVLDEADRLLDLGFKTSVNNILGYLPRQRRTGLFS 204
Query: 115 ATQTEAVEELSKAGLRNPVRVEVRAES 141
ATQT V +L +AGLRNPV V V+ ++
Sbjct: 205 ATQTTEVTDLIRAGLRNPVLVSVKEKA 231
>gi|195499036|ref|XP_002096777.1| GE24865 [Drosophila yakuba]
gi|194182878|gb|EDW96489.1| GE24865 [Drosophila yakuba]
Length = 615
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 97/147 (65%), Gaps = 7/147 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFIS--TLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTP 59
+IISPTREL+ QI V F+ L + L+VGG ++ D+ + +E +L+ TP
Sbjct: 85 ALIISPTRELARQISEVLAQFLEHEDLEHLNQQLIVGGNSIEEDIATLRKETPCILVCTP 144
Query: 60 GRLYDIMERM-DVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFS 114
GRL D+ +R D L+ ++LE LVLDEADRLLD+GF+ ++ I+ LP+ RRTGLFS
Sbjct: 145 GRLEDLFQRKGDDLNLAARVKSLEFLVLDEADRLLDLGFKTSVNNILGYLPRQRRTGLFS 204
Query: 115 ATQTEAVEELSKAGLRNPVRVEVRAES 141
ATQT V +L +AGLRNPV V V+ ++
Sbjct: 205 ATQTTEVTDLIRAGLRNPVLVSVKEKA 231
>gi|195330768|ref|XP_002032075.1| GM26359 [Drosophila sechellia]
gi|194121018|gb|EDW43061.1| GM26359 [Drosophila sechellia]
Length = 613
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 97/147 (65%), Gaps = 7/147 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFIS--TLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTP 59
+IISPTREL+ QI V F+ L + L+VGG ++ D+ + +E +L+ TP
Sbjct: 85 ALIISPTRELARQISEVLAQFLEHEDLEHLNQQLIVGGNSIEEDIATLRKETPCILVCTP 144
Query: 60 GRLYDIMERM-DVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFS 114
GRL D+ +R D L+ ++LE LVLDEADRLLD+GF+ ++ I+ LP+ RRTGLFS
Sbjct: 145 GRLEDLFQRKGDDLNLAARVKSLEFLVLDEADRLLDLGFKTSVNNILGYLPRQRRTGLFS 204
Query: 115 ATQTEAVEELSKAGLRNPVRVEVRAES 141
ATQT V +L +AGLRNPV V V+ ++
Sbjct: 205 ATQTTEVTDLIRAGLRNPVLVSVKEKA 231
>gi|70953337|ref|XP_745776.1| DEAD/DEAH box ATP-dependent RNA helicase [Plasmodium chabaudi
chabaudi]
gi|56526204|emb|CAH78677.1| DEAD/DEAH box ATP-dependent RNA helicase, putative [Plasmodium
chabaudi chabaudi]
Length = 579
Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats.
Identities = 63/135 (46%), Positives = 87/135 (64%), Gaps = 2/135 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL QIY V +P ++ +GGV + KK G N+LI TPGRL
Sbjct: 202 LIISPTRELCLQIYQVCTDLCKYIPQTNGII-IGGVSRNEEKKKFIH-GINILIATPGRL 259
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D M+ +++NL L++DEADRLL +GF+++I+ I+ RLPK R+T LFSATQT VE
Sbjct: 260 LDHMQNTKEFNYKNLVCLIIDEADRLLQIGFEEEINLIVKRLPKKRQTALFSATQTTKVE 319
Query: 123 ELSKAGLRNPVRVEV 137
L + L+ P+ +EV
Sbjct: 320 SLIRLSLQKPIFIEV 334
>gi|21355559|ref|NP_649777.1| CG9630 [Drosophila melanogaster]
gi|74947993|sp|Q9VHU1.1|DDX55_DROME RecName: Full=Probable ATP-dependent RNA helicase DDX55 homolog;
Short=DEAD box protein 55
gi|7299006|gb|AAF54208.1| CG9630 [Drosophila melanogaster]
gi|15291337|gb|AAK92937.1| GH16590p [Drosophila melanogaster]
gi|220945454|gb|ACL85270.1| CG9630-PA [synthetic construct]
gi|220955264|gb|ACL90175.1| CG9630-PA [synthetic construct]
Length = 613
Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 96/147 (65%), Gaps = 7/147 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFIS--TLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTP 59
++ISPTREL+ QI V F+ L + L+VGG ++ D+ + E +L+ TP
Sbjct: 85 ALVISPTRELARQISEVLAQFLEHEDLEHLNQQLIVGGNSIEEDIATLRRETPCILVCTP 144
Query: 60 GRLYDIMERM-DVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFS 114
GRL D+ +R D L+ ++LE LVLDEADRLLD+GF+ ++ I+ LP+ RRTGLFS
Sbjct: 145 GRLEDLFQRKGDDLNLAAQVKSLEFLVLDEADRLLDLGFKTSVNNILGYLPRQRRTGLFS 204
Query: 115 ATQTEAVEELSKAGLRNPVRVEVRAES 141
ATQT V +L +AGLRNPV V V+ ++
Sbjct: 205 ATQTTEVTDLIRAGLRNPVLVSVKEKA 231
>gi|328857817|gb|EGG06932.1| hypothetical protein MELLADRAFT_35775 [Melampsora larici-populina
98AG31]
Length = 530
Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 101/162 (62%), Gaps = 22/162 (13%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPD-----------------VKSVLLVGGV---EVK 41
++ISPTREL++QI+ V I P V+++LL+GG ++
Sbjct: 85 AIVISPTRELATQIFEVFSSIIRCHPSSVNQLGEDSEAKDDSDCVRAMLLIGGTGASSIR 144
Query: 42 ADVKKIEEEGANLLIGTPGRLYDIM-ERMDVLDFRNLEILVLDEADRLLDMGFQKQISYI 100
D+K+ E GA++LI TPGRL + R +++ + LE+LVLDEADRLLD+GF ++ +
Sbjct: 145 KDMKEFRENGADILIATPGRLEEFFVARHALVNLKALEMLVLDEADRLLDLGFAPVLTNV 204
Query: 101 ISRLPKLRRTGLFSAT-QTEAVEELSKAGLRNPVRVEVRAES 141
IS LPK RRTGLFSAT + + EL K GLRNPV++ V+ ++
Sbjct: 205 ISHLPKQRRTGLFSATLLNDGLTELIKVGLRNPVKIVVKVQT 246
>gi|255710545|ref|XP_002551556.1| KLTH0A02244p [Lachancea thermotolerans]
gi|238932933|emb|CAR21114.1| KLTH0A02244p [Lachancea thermotolerans CBS 6340]
Length = 598
Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 93/144 (64%), Gaps = 7/144 (4%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPD----VKSVLLVG--GVEVKADVKKIEEEGANLLI 56
+IISPTRELS QI V + F++ P +KS L+VG V+ DV K E +LI
Sbjct: 87 LIISPTRELSKQIQDVVEAFLAYYPSESCPIKSQLIVGTSSCSVRDDVSKFLENAPQILI 146
Query: 57 GTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
GTPGR+ D M + + + ++VLDEADRLLD+ F+K + I+ LPK RRTGLFSAT
Sbjct: 147 GTPGRVLDFM-KASTVKTSSCGVVVLDEADRLLDVSFEKDVESILGMLPKQRRTGLFSAT 205
Query: 117 QTEAVEELSKAGLRNPVRVEVRAE 140
+ A ++ + G+RNPV++ V+++
Sbjct: 206 ISSAGNQIYRTGMRNPVKIAVKSK 229
>gi|358058414|dbj|GAA95798.1| hypothetical protein E5Q_02455 [Mixia osmundae IAM 14324]
Length = 657
Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 105/177 (59%), Gaps = 23/177 (12%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKS------VLLVGGVE-VKADVKKIEEEGANL 54
G+IISPTREL+ QI+ + T P S +LL+GG++ ++ D+ ++
Sbjct: 84 GLIISPTRELAVQIHQTIDNLVKTQPSTSSAVIPSPLLLIGGIKTLQEDLSDFRSLKPSI 143
Query: 55 LIGTPGRLYDIM----------------ERMDVLDFRNLEILVLDEADRLLDMGFQKQIS 98
LIGTPGRL + + + ++ RNLE+LVLDEADRLLD+GF+ ++
Sbjct: 144 LIGTPGRLEEFLLGSSSIQSIKGKPARKSFVPIVSLRNLEMLVLDEADRLLDLGFEAVLT 203
Query: 99 YIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLAS 155
+++ +PK RRTGLFSAT T+A+ L + GLRNPV++ V+ E+ S S + AS
Sbjct: 204 RLLANMPKQRRTGLFSATMTDALAALVRVGLRNPVKIVVKVEANSTRGSQQVRMPAS 260
>gi|145511960|ref|XP_001441902.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409163|emb|CAK74505.1| unnamed protein product [Paramecium tetraurelia]
Length = 579
Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 64/140 (45%), Positives = 94/140 (67%), Gaps = 3/140 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G+++SP REL+ QIY VA+ F + K +GG + DVK + E+G N+LI TPG+
Sbjct: 80 GLVLSPARELAQQIYDVAKNF-QNVNQAKIAFAIGGTSNEHDVKYLNEKGCNILIATPGK 138
Query: 62 LYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
L +++ D+ ++ + LE L+ DEADRL+ + I +I+S+LPK RRTGLFSAT + A
Sbjct: 139 LRQLLDMADLQVNVKTLEYLIFDEADRLMSNEYSDDIRFILSKLPKQRRTGLFSATLSSA 198
Query: 121 -VEELSKAGLRNPVRVEVRA 139
+ +L K GLRNPV+V+V A
Sbjct: 199 KIHDLMKLGLRNPVQVKVNA 218
>gi|82706116|ref|XP_727247.1| ATP-dependent RNA helicase Has1 [Plasmodium yoelii yoelii 17XNL]
gi|23483000|gb|EAA18812.1| probable ATP-dependent RNA helicase has1 [Plasmodium yoelii yoelii]
Length = 649
Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 63/135 (46%), Positives = 87/135 (64%), Gaps = 2/135 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL QIY V +P ++ +GGV + KK G N+LI TPGRL
Sbjct: 303 LIISPTRELCLQIYQVCTDLCKYIPQTNGII-IGGVSRNEEKKKFIH-GINILIATPGRL 360
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D M+ +++NL L++DEADRLL +GF+++I+ I+ RLPK R+T LFSATQT VE
Sbjct: 361 LDHMQNTKEFNYKNLVCLIIDEADRLLQIGFEEEINLIVKRLPKKRQTALFSATQTTKVE 420
Query: 123 ELSKAGLRNPVRVEV 137
L + L+ P+ +EV
Sbjct: 421 SLIRLSLQKPIFIEV 435
>gi|169763718|ref|XP_001727759.1| ATP-dependent rRNA helicase spb4 [Aspergillus oryzae RIB40]
gi|91208169|sp|Q2UBZ5.1|SPB4_ASPOR RecName: Full=ATP-dependent rRNA helicase spb4
gi|83770787|dbj|BAE60920.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391870162|gb|EIT79348.1| ATP-dependent RNA helicase [Aspergillus oryzae 3.042]
Length = 638
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/168 (44%), Positives = 100/168 (59%), Gaps = 26/168 (15%)
Query: 2 GMIISPTRELSSQIYHV------------------------AQPFISTLPDVKSVLLVGG 37
+IISPTREL+SQIYHV Q F S+ V LL+GG
Sbjct: 90 AIIISPTRELASQIYHVLLSLLAFHPPSASVINPSEDDDVPRQKFPSSTLKVVPQLLLGG 149
Query: 38 VEVKA-DVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQK 95
A D+ K ++ NLL+ TPGRL +++ V + E+LVLDEADRLLD+GF++
Sbjct: 150 STTPAEDLSKFLKQSPNLLVSTPGRLLELLSSPHVHCPQSSFEMLVLDEADRLLDLGFKE 209
Query: 96 QISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKS 143
+ II RLPK RRTGLFSA+ +EAV+++ + GLRNPV+V V+ + S
Sbjct: 210 TLQNIIRRLPKQRRTGLFSASISEAVDQIVRVGLRNPVKVMVKVKGTS 257
>gi|390597033|gb|EIN06433.1| DEAD-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 668
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 103/167 (61%), Gaps = 26/167 (15%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPD--------------------VKSVLLVGGVEVK 41
+IISPTREL+SQI+ V F+S+ P +LL+ E
Sbjct: 88 ALIISPTRELASQIHSVFSLFLSSQPSEPVSDPENSPDLYLKPRHAFPPPLLLISSNESS 147
Query: 42 --ADVKKIEEEGANLLIGTPGRLYDIM--ERMDVLDFRNLEILVLDEADRLLDMGFQKQI 97
D+++ E GA+++IGTPGR+ + + + V++ + LE+LVLDEADRLLD+GFQ +
Sbjct: 148 HAQDIQRFIETGADIVIGTPGRIEEFLLGKGRAVVNVKELEVLVLDEADRLLDLGFQASL 207
Query: 98 SYIISRLPKLRRTGLFSATQTE--AVEELSKAGLRNPVRVEVRAESK 142
+ II+ LPK RRTGLFSAT T+ A+ EL + GLRNP RV V+ +SK
Sbjct: 208 TRIITHLPKQRRTGLFSATMTDANAMSELVRVGLRNPARVVVKVQSK 254
>gi|323509699|dbj|BAJ77742.1| cgd3_3920 [Cryptosporidium parvum]
Length = 327
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 95/149 (63%), Gaps = 2/149 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++ISPTRELS QIY V + LP L++GG + + +K+ + G N+L+ TPGRL
Sbjct: 102 IVISPTRELSLQIYEVCRELCKYLPQTHG-LVMGGANRRTEAEKLSK-GVNILVATPGRL 159
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++ F+NL LV+DEADR+L++GF+++++ II LPK R+T LFSATQT V
Sbjct: 160 LDHLQNTKQFLFKNLLNLVIDEADRILEIGFEEEMNQIIKLLPKERQTSLFSATQTTKVA 219
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQ 151
+L + L+NPV VE + S VS Q
Sbjct: 220 DLVRLSLKNPVLVESKNTSSIATVSGLEQ 248
>gi|86171847|ref|XP_966291.1| DEAD/DEAH box ATP-dependent RNA helicase, putative [Plasmodium
falciparum 3D7]
gi|46361260|emb|CAG25121.1| DEAD/DEAH box ATP-dependent RNA helicase, putative [Plasmodium
falciparum 3D7]
gi|223673362|gb|ACN12798.1| DEAD-box helicase 9 [Plasmodium falciparum]
Length = 601
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 63/135 (46%), Positives = 87/135 (64%), Gaps = 2/135 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL QIY V + +P ++ +GG+ + KK G N+LI TPGRL
Sbjct: 224 LIISPTRELCLQIYQVCKDLCKYIPQTNGII-IGGMSRNEEKKKFIH-GINILIATPGRL 281
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D M+ ++NL L++DEADRLL +GF+++I+ II RLPK R+T LFSATQT VE
Sbjct: 282 LDHMQNTKEFIYKNLICLIIDEADRLLQIGFEEEINLIIKRLPKKRQTALFSATQTTKVE 341
Query: 123 ELSKAGLRNPVRVEV 137
L + L+ P+ +EV
Sbjct: 342 SLIRLSLQKPIFIEV 356
>gi|324502744|gb|ADY41205.1| ATP-dependent RNA helicase DDX55 [Ascaris suum]
Length = 593
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 103/164 (62%), Gaps = 4/164 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+ P REL+ Q+ V + L + ++GG +V+ V+K++ GA +++ TPGR
Sbjct: 98 SLIVVPNRELAIQVSGVCRRIAEPL-HLNVATIIGGKKVQEQVEKLKRNGAAIIVATPGR 156
Query: 62 LYDIMERMDVLDFR--NLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTE 119
I+ L R LE+L++DEADRL+DMGF+K I+ I++ LPK RRTGLFSATQT+
Sbjct: 157 FEQILSLDAELKRRLKALEVLIIDEADRLIDMGFKKSITEILAALPKQRRTGLFSATQTK 216
Query: 120 AVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLH 163
A+EEL K GLRN VRV V A+SK + + + + P LH
Sbjct: 217 AMEELMKFGLRNLVRVTV-ADSKRSASTDAEECEGGTVLPGTLH 259
>gi|194746112|ref|XP_001955528.1| GF16207 [Drosophila ananassae]
gi|190628565|gb|EDV44089.1| GF16207 [Drosophila ananassae]
Length = 607
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/147 (45%), Positives = 94/147 (63%), Gaps = 7/147 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFIS--TLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTP 59
+IISPTREL+ QI V F+ L + L+VGG ++ D+ + +E +L+ TP
Sbjct: 85 ALIISPTRELARQISEVLAQFLEHEDLDYLNQQLIVGGNSIEEDIATLRKETPCILVCTP 144
Query: 60 GRLYDIMERMD-----VLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFS 114
GRL D+ +R ++LE LVLDEADRLLD+GF+ ++ I+ LP+ RRTGLFS
Sbjct: 145 GRLEDLFQRKGSDLNLAARVKSLEFLVLDEADRLLDLGFKTSVNNILGYLPRQRRTGLFS 204
Query: 115 ATQTEAVEELSKAGLRNPVRVEVRAES 141
ATQT V +L +AGLRNPV V V+ ++
Sbjct: 205 ATQTTEVTDLIRAGLRNPVLVSVKEKA 231
>gi|363755520|ref|XP_003647975.1| hypothetical protein Ecym_7324 [Eremothecium cymbalariae
DBVPG#7215]
gi|356892011|gb|AET41158.1| hypothetical protein Ecym_7324 [Eremothecium cymbalariae
DBVPG#7215]
Length = 597
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/147 (45%), Positives = 97/147 (65%), Gaps = 7/147 (4%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPD----VKSVLLVGG--VEVKADVKKIEEEGANLLI 56
+I+SPTREL+SQI V Q F++ PD ++S ++VG V V+ DV + + +LI
Sbjct: 87 LIVSPTRELASQIQLVVQSFLNYYPDNCYPIRSQIIVGTNQVTVRDDVAEFMQNRPQILI 146
Query: 57 GTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
GTPGRL D ++ + V + I+VLDEAD+LLD F K + I+ LPK RRTGLFSAT
Sbjct: 147 GTPGRLLDFLKMVGV-KTTSCGIVVLDEADKLLDYNFGKDVDNILKFLPKQRRTGLFSAT 205
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKS 143
+ A +E+ K G+RNPV++ V++ K+
Sbjct: 206 ISSAGDEVFKTGMRNPVKISVKSHKKA 232
>gi|45201092|ref|NP_986662.1| AGL004Cp [Ashbya gossypii ATCC 10895]
gi|44985875|gb|AAS54486.1| AGL004Cp [Ashbya gossypii ATCC 10895]
gi|374109913|gb|AEY98818.1| FAGL004Cp [Ashbya gossypii FDAG1]
Length = 642
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/147 (45%), Positives = 94/147 (63%), Gaps = 7/147 (4%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPD----VKSVLLVGG--VEVKADVKKIEEEGANLLI 56
+IISPTREL+SQI V + F++ PD +KS LL+G V+ DV E +L+
Sbjct: 130 IIISPTRELASQIQGVIEAFLTYYPDGEYPIKSQLLIGSNTSSVRDDVAAFLEHRPQILV 189
Query: 57 GTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
GTPGRL D + +M + + +LDEAD+LLDM F+K + I+ LPK RRTGLFSAT
Sbjct: 190 GTPGRLLDFL-KMPNIKTSSCGAAILDEADKLLDMNFEKDVETILKMLPKQRRTGLFSAT 248
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKS 143
+ A ++ K G+RNPV+V V+ +K+
Sbjct: 249 VSSAGTQVFKTGMRNPVKVSVKTSNKA 275
>gi|367011431|ref|XP_003680216.1| hypothetical protein TDEL_0C01160 [Torulaspora delbrueckii]
gi|359747875|emb|CCE91005.1| hypothetical protein TDEL_0C01160 [Torulaspora delbrueckii]
Length = 603
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/146 (47%), Positives = 94/146 (64%), Gaps = 7/146 (4%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPD----VKSVLLVGGVE--VKADVKKIEEEGANLLI 56
+I++PTRELS+QI V Q F+ P +KS LLVG + V+ DV K EE +L+
Sbjct: 87 LIVTPTRELSNQIQSVIQSFLDHYPGDSYPIKSQLLVGTSQKTVRDDVTKFLEERPQILV 146
Query: 57 GTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
GTPGR+ D ++ M + + ++VLDEADRLLD F K + I+ LPK RRTGLFSAT
Sbjct: 147 GTPGRVLDFLQ-MPSVKTLSCNMVVLDEADRLLDSDFFKDVEKILRTLPKQRRTGLFSAT 205
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESK 142
+EA ++ K GLRNPV+V V + K
Sbjct: 206 ISEAGNQIFKTGLRNPVKVTVNSSKK 231
>gi|410078624|ref|XP_003956893.1| hypothetical protein KAFR_0D01120 [Kazachstania africana CBS 2517]
gi|372463478|emb|CCF57758.1| hypothetical protein KAFR_0D01120 [Kazachstania africana CBS 2517]
Length = 610
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 94/149 (63%), Gaps = 8/149 (5%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPD-----VKSVLLVGG--VEVKADVKKIEEEGANL 54
+IISPTRELS QI V F+ PD +KS LLVG ++ DV EE ++
Sbjct: 83 SLIISPTRELSRQIQTVINSFLQHYPDSETKPIKSQLLVGTDTKTIRDDVASFLEERPSI 142
Query: 55 LIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFS 114
L+GTPGR+ D ++ V + ++VLDEADRLLD+ F K I I+S LPK RRTGLFS
Sbjct: 143 LVGTPGRVLDFLQIASV-KAQLCSMVVLDEADRLLDISFSKDIEKILSFLPKQRRTGLFS 201
Query: 115 ATQTEAVEELSKAGLRNPVRVEVRAESKS 143
AT T A + K GLRNPV+++V +++ S
Sbjct: 202 ATITSAGSNIFKTGLRNPVKIKVNSKNNS 230
>gi|339242009|ref|XP_003376930.1| ATP-dependent RNA helicase DDX55 [Trichinella spiralis]
gi|316974330|gb|EFV57825.1| ATP-dependent RNA helicase DDX55 [Trichinella spiralis]
Length = 596
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 103/164 (62%), Gaps = 18/164 (10%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+ P++EL+ Q+ V F++ + +KSV+ G VK DVKK + G N++I TPGR
Sbjct: 91 AVILVPSQELAVQVEKVFSYFLN-VTKLKSVVFSGKRNVKKDVKKFCKGGGNIIIATPGR 149
Query: 62 LYDIM----ERMDV---LDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFS 114
L ++ E D + F+ +E+ VLDEADRLL++GF K ++ I+S LPK RRTGLFS
Sbjct: 150 LETLLNLNSENGDFNLKVQFKMVEVFVLDEADRLLELGFSKSMTEIMSHLPKTRRTGLFS 209
Query: 115 ATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKT 158
AT E +EEL K G+RNPV++ V + ++QL S KT
Sbjct: 210 ATIPEKMEELIKIGMRNPVKI----------VISGNEQLFSKKT 243
>gi|307189121|gb|EFN73577.1| Probable ATP-dependent RNA helicase DDX10 [Camponotus floridanus]
Length = 791
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 111/175 (63%), Gaps = 7/175 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QIY + + DV + L++GG ++K + K++++ N++I TPGR
Sbjct: 113 ALIITPTRELAYQIYETLRK-VGRYHDVSAGLIIGGKDLKFERKRMDQ--CNVVICTPGR 169
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + D N++ILVLDEADR LDMGF+K ++ II+ LP R+T LFSATQT++V
Sbjct: 170 LLQHMDENPLFDCVNMQILVLDEADRCLDMGFEKTMNCIIANLPPKRQTLLFSATQTKSV 229
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
++L++ L++P+ V V S H + + Q L + ++W+ +RNH
Sbjct: 230 KDLARLSLKDPLYVSVH--EYSTHTTPENLQQNYIVCSLEDKMAMLWSF--IRNH 280
>gi|167385227|ref|XP_001737255.1| ATP-dependent RNA helicase DDX55 [Entamoeba dispar SAW760]
gi|165899983|gb|EDR26453.1| ATP-dependent RNA helicase DDX55, putative [Entamoeba dispar
SAW760]
Length = 499
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 99/144 (68%), Gaps = 9/144 (6%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEE---GANLLIGT 58
G+IISPTREL+ QIY + + F ++ LL GG+ D+ K+EEE GAN+++GT
Sbjct: 81 GIIISPTRELAHQIYDITKVFCKHF-NMTIGLLTGGI----DISKLEEEMKKGANIIVGT 135
Query: 59 PGRLYDIM-ERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQ 117
GR+ +++ ++ L++ N+E+L+LDE D++++MGF + I++II LPK RRTGLFSAT
Sbjct: 136 AGRIEEVITNKLFELEWNNVEVLILDEGDKMIEMGFSQSITHIICHLPKQRRTGLFSATM 195
Query: 118 TEAVEELSKAGLRNPVRVEVRAES 141
+ + + AG RNP ++++ ++
Sbjct: 196 PKELNKFIIAGCRNPYKIQISNDT 219
>gi|90101760|sp|Q750F8.2|SPB4_ASHGO RecName: Full=ATP-dependent rRNA helicase SPB4
Length = 599
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/147 (45%), Positives = 94/147 (63%), Gaps = 7/147 (4%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPD----VKSVLLVGG--VEVKADVKKIEEEGANLLI 56
+IISPTREL+SQI V + F++ PD +KS LL+G V+ DV E +L+
Sbjct: 87 IIISPTRELASQIQGVIEAFLTYYPDGEYPIKSQLLIGSNTSSVRDDVAAFLEHRPQILV 146
Query: 57 GTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
GTPGRL D + +M + + +LDEAD+LLDM F+K + I+ LPK RRTGLFSAT
Sbjct: 147 GTPGRLLDFL-KMPNIKTSSCGAAILDEADKLLDMNFEKDVETILKMLPKQRRTGLFSAT 205
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKS 143
+ A ++ K G+RNPV+V V+ +K+
Sbjct: 206 VSSAGTQVFKTGMRNPVKVSVKTSNKA 232
>gi|145349792|ref|XP_001419312.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579543|gb|ABO97605.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 481
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 111/177 (62%), Gaps = 7/177 (3%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++ISPTREL+ QI+ + + + LL+GG +V+ + ++ + N+L+ TPGR
Sbjct: 77 ALVISPTRELAIQIFQCLTK-VGARHTMSAGLLIGGKDVQEEANRVNK--MNILVCTPGR 133
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + D L++LVLDEADR+LD+GF K ++ II LPK R+T LFSATQT++V
Sbjct: 134 LLQHMDETPMFDCVTLQMLVLDEADRMLDLGFTKTLNAIIDNLPKNRQTLLFSATQTKSV 193
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNHHN 178
++L++ GL++P + V AES H QQ+ ++ L +EV+W+ ++ H N
Sbjct: 194 KDLARLGLKDPEYLSVHAES-VHSTPPKLQQMVTT-CALEKKIEVLWSF--IKTHLN 246
>gi|302696301|ref|XP_003037829.1| hypothetical protein SCHCODRAFT_80198 [Schizophyllum commune H4-8]
gi|300111526|gb|EFJ02927.1| hypothetical protein SCHCODRAFT_80198 [Schizophyllum commune H4-8]
Length = 702
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 106/173 (61%), Gaps = 22/173 (12%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSV-----------------LLVGGVEVKA-- 42
+IISPTREL++QI+ V F+ P V+ V LL+ +
Sbjct: 87 ALIISPTRELATQIHSVFSLFLQAQP-VEEVSEYEEGKEPEREYPDPLLLISSDQSSPAQ 145
Query: 43 DVKKIEEEGANLLIGTPGRLYDIM--ERMDVLDFRNLEILVLDEADRLLDMGFQKQISYI 100
DV+++ E GA+++IGTPGR+ + + + + LE+LVLDEADRLLD+GFQ ++ I
Sbjct: 146 DVQRLLETGADIVIGTPGRVEEFLLGRGQGTVSVKELEVLVLDEADRLLDLGFQLSLTRI 205
Query: 101 ISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQL 153
++ LPK RRTGLFSAT T+A+ EL +AGLRNP R V+ +SK A++ ++
Sbjct: 206 LTHLPKQRRTGLFSATMTDALGELIRAGLRNPARAVVKVQSKQTRKGANAGEV 258
>gi|221128479|ref|XP_002157158.1| PREDICTED: ATP-dependent RNA helicase DDX55-like [Hydra
magnipapillata]
Length = 581
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 94/145 (64%), Gaps = 5/145 (3%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++++PTREL+ QI V + F ++ +L VGG +K ++ + G N++I TPG+
Sbjct: 83 AIVLTPTRELAQQISKVLEHFTQE-SNLSQILFVGGKSIKENISSFNDNGGNIVIATPGK 141
Query: 62 LYDIMERMDV---LDFRNLEILVLDEADRLL-DMGFQKQISYIISRLPKLRRTGLFSATQ 117
L + E D+ + ++LEIL+LDEADRLL + F++ ++ I LPK RRT LFSATQ
Sbjct: 142 LLALFESKDIDLKVAVKSLEILILDEADRLLSNSNFEQALTQIFHYLPKQRRTSLFSATQ 201
Query: 118 TEAVEELSKAGLRNPVRVEVRAESK 142
T+ VE +AGLRNPV+V VR + K
Sbjct: 202 TDKVESFIRAGLRNPVQVLVREKKK 226
>gi|50309183|ref|XP_454597.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74660391|sp|Q6CN92.1|SPB4_KLULA RecName: Full=ATP-dependent rRNA helicase SPB4
gi|49643732|emb|CAG99684.1| KLLA0E14367p [Kluyveromyces lactis]
Length = 596
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 92/143 (64%), Gaps = 7/143 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPD----VKSVLLVG--GVEVKADVKKIEEEGANLL 55
+IISPTREL+SQI+ V + F+ PD ++S LLVG V+ D+ + +L
Sbjct: 86 SLIISPTRELASQIHDVIEDFLKYYPDNLYPIRSQLLVGTSSASVRDDINSFTDNRPQIL 145
Query: 56 IGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
+GTPGR+ D +++ +V + +VLDEAD+LLD+ FQK + I+ LPK RRTGLFSA
Sbjct: 146 VGTPGRVLDFLQKTNV-KTASCGTVVLDEADKLLDLNFQKDVETILKMLPKQRRTGLFSA 204
Query: 116 TQTEAVEELSKAGLRNPVRVEVR 138
T A ++ K G+RNPV+V V+
Sbjct: 205 TIESAGAQIFKTGMRNPVKVAVK 227
>gi|403223598|dbj|BAM41728.1| DEAD-box family ATP-dependent helicase [Theileria orientalis strain
Shintoku]
Length = 502
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 94/142 (66%), Gaps = 2/142 (1%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G+IISPTRELS QI+ VA+ LP L++GG K + K+ G N+LI TPGR
Sbjct: 113 GLIISPTRELSLQIFEVAKDVCKYLPQTLG-LVMGGANRKQEADKLVR-GVNILIATPGR 170
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D M+ ++NL + V+DEADR+L++GF+++I+ II LPK R+T LFSAT T V
Sbjct: 171 LLDHMQNTKGFIYKNLLVFVIDEADRILEIGFEEEINQIIKMLPKNRQTSLFSATHTSNV 230
Query: 122 EELSKAGLRNPVRVEVRAESKS 143
++L++ L++PV ++ A+ +
Sbjct: 231 DDLARLSLKSPVFLQASADDSA 252
>gi|67598831|ref|XP_666241.1| DEAD/DEAH box ATP-dependent RNA helicase [Cryptosporidium hominis
TU502]
gi|54657199|gb|EAL36013.1| DEAD/DEAH box ATP-dependent RNA helicase [Cryptosporidium hominis]
Length = 519
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 95/149 (63%), Gaps = 2/149 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++ISPTRELS QIY V + LP L++GG + + +K+ + G N+L+ TPGRL
Sbjct: 102 IVISPTRELSLQIYEVCRELCKYLPQTHG-LVMGGANRRTEAEKLSK-GVNILVATPGRL 159
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++ F+NL LV+DEADR+L++GF+++++ II LPK R+T LFSATQT V
Sbjct: 160 LDHLQNTKQFLFKNLLNLVIDEADRILEIGFEEEMNQIIKLLPKERQTSLFSATQTTKVA 219
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQ 151
+L + L+NPV VE + S VS Q
Sbjct: 220 DLVRLSLKNPVLVESKNTSSIATVSGLEQ 248
>gi|126644825|ref|XP_001388129.1| DEAD/DEAH box ATP-dependent RNA helicase [Cryptosporidium parvum
Iowa II]
gi|126117357|gb|EAZ51457.1| DEAD/DEAH box ATP-dependent RNA helicase, putative [Cryptosporidium
parvum Iowa II]
gi|323509235|dbj|BAJ77510.1| cgd3_3920 [Cryptosporidium parvum]
Length = 519
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 95/149 (63%), Gaps = 2/149 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++ISPTRELS QIY V + LP L++GG + + +K+ + G N+L+ TPGRL
Sbjct: 102 IVISPTRELSLQIYEVCRELCKYLPQTHG-LVMGGANRRTEAEKLSK-GVNILVATPGRL 159
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++ F+NL LV+DEADR+L++GF+++++ II LPK R+T LFSATQT V
Sbjct: 160 LDHLQNTKQFLFKNLLNLVIDEADRILEIGFEEEMNQIIKLLPKERQTSLFSATQTTKVA 219
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQ 151
+L + L+NPV VE + S VS Q
Sbjct: 220 DLVRLSLKNPVLVESKNTSSIATVSGLEQ 248
>gi|307198143|gb|EFN79171.1| Probable ATP-dependent RNA helicase DDX10 [Harpegnathos saltator]
Length = 738
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 110/174 (63%), Gaps = 7/174 (4%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++I+PTREL+ QIY + + D + L++GG ++K + K++++ N++I TPGRL
Sbjct: 54 LVITPTRELAYQIYDTLRK-VGQYHDFSTGLIIGGKDLKFEAKRMDQ--YNVIICTPGRL 110
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ + + N++ILVLDEADR LDMGF+K ++ II LP R+T LFSATQT++V+
Sbjct: 111 LQHMDENQLFNCVNMQILVLDEADRCLDMGFEKTMNAIIENLPPKRQTLLFSATQTKSVK 170
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
+L++ LR+P+ + A S HV+ S + L L ++W+ +RNH
Sbjct: 171 DLARLSLRDPLYIS--AHEYSAHVTPESLHQSYIVCALEDKLAMLWSF--IRNH 220
>gi|391338992|ref|XP_003743837.1| PREDICTED: probable ATP-dependent RNA helicase DDX10-like
[Metaseiulus occidentalis]
Length = 853
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 115/181 (63%), Gaps = 11/181 (6%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++I+PTREL+ QI+ V + + D + L++GG EV + K+++ G N++I TPGRL
Sbjct: 142 LVITPTRELAYQIFEVLKK-VGIRHDFSAGLIIGGTEVGFERKRLQ--GCNIIICTPGRL 198
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M++ ++D NL+ILVLDEADR+LDMGFQ+ ++ I+ LP R+T LFSATQT++V+
Sbjct: 199 LQHMDQNPLMDPTNLKILVLDEADRILDMGFQRDMNAILENLPSDRQTLLFSATQTKSVK 258
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLH--LEVIWNVNQMRNHHNLL 180
+L++ L++P + V +S A+ + L LH L ++W+ ++NH +
Sbjct: 259 DLARLSLKDPSYISVHEKS----AKATPEDLHQDYLVCELHDKLSLLWSF--LKNHKSKK 312
Query: 181 I 181
I
Sbjct: 313 I 313
>gi|354547214|emb|CCE43948.1| hypothetical protein CPAR2_501730 [Candida parapsilosis]
Length = 619
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 102/162 (62%), Gaps = 8/162 (4%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPD-----VKSVLLVGGV-EVKADVKKIEEEGANL 54
+ ++ISPTREL+ QI V + LP+ +K+ LLVG + V+ D++K +E +
Sbjct: 94 LSIVISPTRELAKQIQMVFDRVLEYLPEDLMPQIKTQLLVGSLGTVREDLEKFQENQPQV 153
Query: 55 LIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFS 114
LI TPGRL D + V+ +LEI++LDEAD+LLD F+ + I+ +LPK RRTGLFS
Sbjct: 154 LIATPGRLLDFLTTSPVVKTSSLEIVILDEADKLLDFSFEMDVVNILKKLPKQRRTGLFS 213
Query: 115 ATQTEAVEELSKAGLRNPVRVEVRAES--KSHHVSASSQQLA 154
AT + A + + K G+ NPVRV+V+ ++ S +S QL+
Sbjct: 214 ATISSAGDTIFKTGMNNPVRVQVKTKNFLGEQQNSPTSLQLS 255
>gi|330938107|ref|XP_003305686.1| hypothetical protein PTT_18597 [Pyrenophora teres f. teres 0-1]
gi|311317192|gb|EFQ86226.1| hypothetical protein PTT_18597 [Pyrenophora teres f. teres 0-1]
Length = 640
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 108/200 (54%), Gaps = 34/200 (17%)
Query: 2 GMIISPTRELSSQIYHV--------------------------AQPFISTLPD-----VK 30
+IISPTREL++QI+ V A P T P V
Sbjct: 87 AIIISPTRELATQIHTVLSSLLRFHAPSAALLDPEDEDTDMEDAAPPKPTFPPGTLRVVP 146
Query: 31 SVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLL 89
+LL G V D+ + + N+LIGTPGRL +++ V + + LVLDEADRLL
Sbjct: 147 QLLLGGSVTPAQDLSRFLKSSTNVLIGTPGRLLELLSSPHVHCSQSSFDALVLDEADRLL 206
Query: 90 DMGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVR--VEVRAESKSHHVS 147
D+GF + I+SR+PK RRTGLFSA+ +EAV++L + GLRNPVR V+V+A + S+ +
Sbjct: 207 DLGFSADLQKILSRIPKQRRTGLFSASVSEAVDQLIRVGLRNPVRIAVKVKARAASNGTT 266
Query: 148 ASSQQLASSKTPLGLHLEVI 167
+ + KTP L + +
Sbjct: 267 GEAGAIEDRKTPASLQMSYL 286
>gi|389584518|dbj|GAB67250.1| DEAD/DEAH box ATP-dependent RNA helicase, partial [Plasmodium
cynomolgi strain B]
Length = 413
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/138 (44%), Positives = 88/138 (63%), Gaps = 3/138 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL QIY V + +P ++ +GG+ + K I G N+LI TPGRL
Sbjct: 37 LIISPTRELCLQIYQVCKDLCKYIPQTNGII-IGGMSRNEEKKFIH--GINILIATPGRL 93
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D M+ ++NL L++DEADRLL +GF+++I+ I+ RLPK R+T LFSATQT VE
Sbjct: 94 LDHMQNTKEFIYKNLISLIIDEADRLLQIGFEEEINLIVKRLPKKRQTALFSATQTTKVE 153
Query: 123 ELSKAGLRNPVRVEVRAE 140
L + L+ P+ +EV +
Sbjct: 154 NLIRLSLQKPIFIEVTTK 171
>gi|344228481|gb|EGV60367.1| hypothetical protein CANTEDRAFT_132157 [Candida tenuis ATCC 10573]
Length = 608
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 98/153 (64%), Gaps = 6/153 (3%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPD----VKSVLLVGGV-EVKADVKKIEEEGANLL 55
+++SPTREL+SQI V I+ LP+ +K+ LL+G + V+ D++K + +L
Sbjct: 89 FAVVLSPTRELASQIQAVFDSLIAYLPEDKPAIKTQLLIGSIGTVREDLQKFVKTSPQIL 148
Query: 56 IGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
I TPGR D + +V + EI++LDEAD+LLD+ F K + ++ RLPK RRTGLFSA
Sbjct: 149 IATPGRFLDFISSTNVRT-NSTEIVILDEADKLLDISFGKDVVSVLQRLPKQRRTGLFSA 207
Query: 116 TQTEAVEELSKAGLRNPVRVEVRAESKSHHVSA 148
T + A + + KAG+ NPV+V V+ + S + SA
Sbjct: 208 TLSAAGDSIFKAGMTNPVKVTVKGSTSSLNSSA 240
>gi|344304870|gb|EGW35102.1| hypothetical protein SPAPADRAFT_69435 [Spathaspora passalidarum
NRRL Y-27907]
Length = 755
Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 104/170 (61%), Gaps = 8/170 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+SPTREL+ QI+ V I + L+ GG +VK + +++ N+L+GTPGR
Sbjct: 121 ALIVSPTRELAVQIFEVLTK-IGKYNQFSAGLVTGGKDVKYEKERVSR--MNILVGTPGR 177
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ + ++ NL++LVLDEADR LDMGF+KQI I+ LP R+T LFSATQ++ V
Sbjct: 178 ISQHLNEAVGMETSNLQVLVLDEADRCLDMGFKKQIDNILGHLPPTRQTLLFSATQSDNV 237
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASS--KTPLGLHLEVIWN 169
++L++ L NP R+ V S +SA+ + L K PL L+V+W+
Sbjct: 238 KDLARLSLTNPQRIGV---SSDQEISATPESLEQYYVKVPLDEKLDVLWS 284
>gi|299747656|ref|XP_001837176.2| ATP-dependent rRNA helicase spb4 [Coprinopsis cinerea okayama7#130]
gi|298407621|gb|EAU84793.2| ATP-dependent rRNA helicase spb4 [Coprinopsis cinerea okayama7#130]
Length = 646
Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 99/163 (60%), Gaps = 20/163 (12%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSV----------------LLVGGVEVKADVK 45
++ISPTREL++QI+ + F+ + P + + D++
Sbjct: 54 ALVISPTRELATQIHSIFAQFLDSQPGSAAAENEEDDPSLLPSPLLLISSDDSSPAKDIQ 113
Query: 46 KIEEEGANLLIGTPGRLYDIM--ERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISR 103
+ GA+++IGTPGR+ + + + D + + LE+LVLDEADRLLD+GFQ+ ++ II+
Sbjct: 114 RFLSTGADIVIGTPGRVEEFLLGKGRDSVSVKELEVLVLDEADRLLDLGFQQALTRIITH 173
Query: 104 LPKLRRTGLFSATQTE--AVEELSKAGLRNPVRVEVRAESKSH 144
LPK RRTGLFSAT TE A+ EL + GLRNP RV V+ ++K H
Sbjct: 174 LPKQRRTGLFSATMTEADALSELVRVGLRNPARVVVKVQAKKH 216
>gi|156101247|ref|XP_001616317.1| DEAD/DEAH box ATP-dependent RNA helicase [Plasmodium vivax Sal-1]
gi|148805191|gb|EDL46590.1| DEAD/DEAH box ATP-dependent RNA helicase, putative [Plasmodium
vivax]
Length = 599
Score = 119 bits (297), Expect = 6e-25, Method: Composition-based stats.
Identities = 62/135 (45%), Positives = 87/135 (64%), Gaps = 2/135 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL QIY V + +P ++ +GG+ + KK G N+LI TPGRL
Sbjct: 222 LIISPTRELCLQIYQVCKDLCKYIPQTNGII-IGGMSRNEEKKKFIH-GINILIATPGRL 279
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D M+ ++NL L++DEADRLL +GF+++I+ I+ RLPK R+T LFSATQT VE
Sbjct: 280 LDHMQNTKEFIYKNLISLIIDEADRLLQIGFEEEINLIVKRLPKKRQTALFSATQTTKVE 339
Query: 123 ELSKAGLRNPVRVEV 137
L + L+ P+ +EV
Sbjct: 340 NLIRLSLQKPIFIEV 354
>gi|241954424|ref|XP_002419933.1| ATP-dependent RNA helicase, putative; atp-dependent rna helicase
dbp4 (ec 3.6.1.-) (dead box protein 4 (helicase ca4)
(helicase uf1) [Candida dubliniensis CD36]
gi|223643274|emb|CAX42148.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
Length = 765
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 104/170 (61%), Gaps = 8/170 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+SPTREL+ QI+ V I + L+ GG +V+ + +++ N+L+GTPGR
Sbjct: 123 ALIVSPTRELAVQIFEVLTK-IGKYNSFSAGLVTGGKDVQFEKERVSR--MNILVGTPGR 179
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ + ++ NL++LVLDEADR LDMGF+KQI I+ LP R+T LFSATQ+E+V
Sbjct: 180 ISQHLNEAVGMETSNLQVLVLDEADRCLDMGFKKQIDNILGHLPTTRQTLLFSATQSESV 239
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASS--KTPLGLHLEVIWN 169
+L++ L NP ++ V S VSA+ + L K PL L+V+W+
Sbjct: 240 NDLARLSLTNPNKIGV---SSDQEVSATPESLEQYYVKVPLDEKLDVLWS 286
>gi|221057708|ref|XP_002261362.1| DEAD/DEAH box ATP dependent DNA helicase [Plasmodium knowlesi
strain H]
gi|194247367|emb|CAQ40767.1| DEAD/DEAH box ATP dependent DNA helicase,putative [Plasmodium
knowlesi strain H]
Length = 605
Score = 119 bits (297), Expect = 6e-25, Method: Composition-based stats.
Identities = 62/135 (45%), Positives = 87/135 (64%), Gaps = 2/135 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL QIY V + +P ++ +GG+ + KK G N+LI TPGRL
Sbjct: 228 LIISPTRELCLQIYQVCKDLCKYIPQTNGII-IGGMSRNEEKKKFIH-GINILIATPGRL 285
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D M+ ++NL L++DEADRLL +GF+++I+ I+ RLPK R+T LFSATQT VE
Sbjct: 286 LDHMQNTKEFIYKNLISLIIDEADRLLQIGFEEEINLIVKRLPKKRQTALFSATQTTKVE 345
Query: 123 ELSKAGLRNPVRVEV 137
L + L+ P+ +EV
Sbjct: 346 NLIRLSLQKPIFIEV 360
>gi|402222448|gb|EJU02514.1| DEAD-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 667
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 107/177 (60%), Gaps = 20/177 (11%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSV----------------LLVGGVEVKA--D 43
++ISPTREL++QI+ V F+++ P LLV G + D
Sbjct: 91 ALVISPTRELAAQIHSVFSLFLASQPSSAEADEDSTEPAPLKYPPPLLLVSGSDSTPHQD 150
Query: 44 VKKIEEEGANLLIGTPGRLYDIM--ERMDVLDFRNLEILVLDEADRLLDMGFQKQISYII 101
V ++ E GA++++GTPGR+ + + + + + + L+ILVLDEADRLLD+GF ++ I+
Sbjct: 151 VSRLLETGADIVVGTPGRVEEFLLGKGQNSVSTKELDILVLDEADRLLDLGFSVTLTRIL 210
Query: 102 SRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKT 158
+ LPK RRTGLFSAT T+A+ EL + GLRNPVRV V+ E+K + + A K+
Sbjct: 211 NHLPKQRRTGLFSATMTDALSELVRVGLRNPVRVVVKVENKKRGLKRRREDEAPDKS 267
>gi|183229616|ref|XP_657423.2| DEAD/DEAH box helicase [Entamoeba histolytica HM-1:IMSS]
gi|169803121|gb|EAL52039.2| DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449703658|gb|EMD44066.1| ATPdependent RNA helicase DDX55, putative [Entamoeba histolytica
KU27]
Length = 499
Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 103/154 (66%), Gaps = 9/154 (5%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEE---GANLLIGT 58
G+IISPTREL+ QIY +A+ F ++ LL GG+ D+ +EEE GAN+++GT
Sbjct: 81 GIIISPTRELAHQIYDIAKIFCKHF-NMTIGLLTGGI----DISTLEEEMKKGANIVVGT 135
Query: 59 PGRLYD-IMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQ 117
GR+ + I+ ++ L++ N+E+L+LDE DR+++MGF + ++ II LPK RRTGLFSAT
Sbjct: 136 AGRIEEVIVNKLFELEWNNVEVLILDEGDRMIEMGFSQSMTRIICHLPKQRRTGLFSATM 195
Query: 118 TEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQ 151
+ + + AG RNP ++++ ++ +S +++
Sbjct: 196 PKELNKFVIAGCRNPYKIQISNDNTLTPISLANE 229
>gi|294655023|ref|XP_457109.2| DEHA2B03322p [Debaryomyces hansenii CBS767]
gi|218512020|sp|Q6BXG0.2|DBP4_DEBHA RecName: Full=ATP-dependent RNA helicase DBP4
gi|199429633|emb|CAG85100.2| DEHA2B03322p [Debaryomyces hansenii CBS767]
Length = 766
Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 107/170 (62%), Gaps = 8/170 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ V I + + L+ GG +VK + +++ + N+L+GTPGR
Sbjct: 121 ALIISPTRELAVQIFEVLVK-IGKHNNFSAGLVTGGKDVKYEKERVSK--MNILVGTPGR 177
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ + ++ NL++LVLDEADR LDMGF+KQI I+ LP R+T LFSATQ+++V
Sbjct: 178 ISQHLNESVGMETSNLQVLVLDEADRCLDMGFKKQIDNILGHLPPTRQTLLFSATQSDSV 237
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASS--KTPLGLHLEVIWN 169
++L++ L NP RV + S +SA+ + L K PL L+V+W+
Sbjct: 238 KDLARLSLANPKRVGI---SSDQELSATPESLEQYYIKIPLDEKLDVLWS 284
>gi|448515464|ref|XP_003867345.1| Spb4 ATP-dependent RNA helicase [Candida orthopsilosis Co 90-125]
gi|380351684|emb|CCG21907.1| Spb4 ATP-dependent RNA helicase [Candida orthopsilosis]
Length = 616
Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 96/147 (65%), Gaps = 6/147 (4%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPD-----VKSVLLVGGV-EVKADVKKIEEEGANL 54
+ ++ISPTREL+ QI V + LP+ +K+ LLVG + V+ D++K +E +
Sbjct: 94 LSIVISPTRELAKQIQMVFDRVLEYLPEELTPQIKTQLLVGSLGNVREDLEKFQENQPQI 153
Query: 55 LIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFS 114
LI TPGRL D + ++ +LEI++LDEAD+LLD F+ + I+ +LPK RRTGLFS
Sbjct: 154 LIATPGRLLDFLTTSPIVKTSSLEIVILDEADKLLDFSFEMDVVNILKKLPKQRRTGLFS 213
Query: 115 ATQTEAVEELSKAGLRNPVRVEVRAES 141
AT + A + + K G+ NPV+V+V+ ++
Sbjct: 214 ATVSSAGDAIFKTGMNNPVKVQVKTKN 240
>gi|91208171|sp|Q4P9E5.2|SPB4_USTMA RecName: Full=ATP-dependent rRNA helicase SPB4
Length = 767
Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 119/237 (50%), Gaps = 64/237 (27%)
Query: 2 GMIISPTRELSSQIYHVAQPFIS-------------------------------TLPDVK 30
+I+SPTREL+ QIY V F+ T PD
Sbjct: 104 ALIVSPTRELAEQIYKVLVMFLDAQNHAHVQAQQQQDQDEQDEQDEQEAQSDSDTDPDAS 163
Query: 31 SVL----------------------LVGGVEVKA--DVKKIEEEGANLLIGTPGRLYDIM 66
+ L +VGG + D +++ + GA++L+GTPGRL +++
Sbjct: 164 TALNNKRKSSNHLVARKNMISGAQLVVGGSKCTPLDDYRQLRDSGADILVGTPGRLEELL 223
Query: 67 ERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSK 126
+ V +LE+LVLDEADRLLD+GF + + I+S LPK RRTGLFSAT T+A+ EL +
Sbjct: 224 SKKGVKK-SSLEVLVLDEADRLLDLGFTENLRRILSLLPKQRRTGLFSATMTDALSELVR 282
Query: 127 AGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNHHNLLICL 183
GLRNPVRV V+ E+K H S+S S +TP L N+ Q+ N L L
Sbjct: 283 IGLRNPVRVVVKVEAK-HKTSSSIDD--SRRTPATLQ-----NLYQLCRAQNKLAQL 331
>gi|71018369|ref|XP_759415.1| hypothetical protein UM03268.1 [Ustilago maydis 521]
gi|46098946|gb|EAK84179.1| hypothetical protein UM03268.1 [Ustilago maydis 521]
Length = 808
Score = 119 bits (297), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 119/237 (50%), Gaps = 64/237 (27%)
Query: 2 GMIISPTRELSSQIYHVAQPFIS-------------------------------TLPDVK 30
+I+SPTREL+ QIY V F+ T PD
Sbjct: 145 ALIVSPTRELAEQIYKVLVMFLDAQNHAHVQAQQQQDQDEQDEQDEQEAQSDSDTDPDAS 204
Query: 31 SVL----------------------LVGGVEVKA--DVKKIEEEGANLLIGTPGRLYDIM 66
+ L +VGG + D +++ + GA++L+GTPGRL +++
Sbjct: 205 TALNNKRKSSNHLVARKNMISGAQLVVGGSKCTPLDDYRQLRDSGADILVGTPGRLEELL 264
Query: 67 ERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSK 126
+ V +LE+LVLDEADRLLD+GF + + I+S LPK RRTGLFSAT T+A+ EL +
Sbjct: 265 SKKGVKK-SSLEVLVLDEADRLLDLGFTENLRRILSLLPKQRRTGLFSATMTDALSELVR 323
Query: 127 AGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNHHNLLICL 183
GLRNPVRV V+ E+K H S+S S +TP L N+ Q+ N L L
Sbjct: 324 IGLRNPVRVVVKVEAK-HKTSSSIDD--SRRTPATLQ-----NLYQLCRAQNKLAQL 372
>gi|440292099|gb|ELP85341.1| ATP-dependent RNA helicase HAS1, putative [Entamoeba invadens IP1]
Length = 566
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 99/151 (65%), Gaps = 3/151 (1%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QIY V + + K+ LL+GG K D +++ E GA +++ TPGR
Sbjct: 181 AIIISPTRELALQIYEVLEKLMQNSERSKA-LLIGGNPKKKD-EEVLENGACVVVATPGR 238
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D + F+NL+ LV+DEADR+L+ GF+ ++ I++RLPK R+T LFSATQT+ V
Sbjct: 239 LLDHLSNTRCFLFKNLKCLVIDEADRILEAGFEDEMRQILNRLPKNRQTMLFSATQTDKV 298
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQ 152
E+++ L++PV V V ES + S+ QQ
Sbjct: 299 EDMANLSLKDPVFVNVE-ESSTTATSSKLQQ 328
>gi|68470912|ref|XP_720463.1| hypothetical protein CaO19.2712 [Candida albicans SC5314]
gi|68471370|ref|XP_720233.1| hypothetical protein CaO19.10227 [Candida albicans SC5314]
gi|74627403|sp|Q5AF95.1|DBP4_CANAL RecName: Full=ATP-dependent RNA helicase DBP4
gi|46442091|gb|EAL01383.1| hypothetical protein CaO19.10227 [Candida albicans SC5314]
gi|46442332|gb|EAL01622.1| hypothetical protein CaO19.2712 [Candida albicans SC5314]
Length = 765
Score = 118 bits (296), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 104/170 (61%), Gaps = 8/170 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+SPTREL+ QI+ V I + L+ GG +V+ + +++ N+L+GTPGR
Sbjct: 123 ALIVSPTRELAVQIFEVLTK-IGKYNTFSAGLVTGGKDVQFEKERVSR--MNILVGTPGR 179
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ + ++ NL++LVLDEADR LDMGF+KQI I+ LP R+T LFSATQ+E+V
Sbjct: 180 ISQHLNEAVGMETSNLQVLVLDEADRCLDMGFKKQIDNILGHLPTTRQTLLFSATQSESV 239
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASS--KTPLGLHLEVIWN 169
+L++ L NP ++ V S VSA+ + L K PL L+V+W+
Sbjct: 240 NDLARLSLTNPNKIGV---SSDQEVSATPESLEQYYVKVPLDEKLDVLWS 286
>gi|238881563|gb|EEQ45201.1| hypothetical protein CAWG_03515 [Candida albicans WO-1]
Length = 765
Score = 118 bits (296), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 104/170 (61%), Gaps = 8/170 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+SPTREL+ QI+ V I + L+ GG +V+ + +++ N+L+GTPGR
Sbjct: 123 ALIVSPTRELAVQIFEVLTK-IGKYNTFSAGLVTGGKDVQFEKERVSR--MNILVGTPGR 179
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ + ++ NL++LVLDEADR LDMGF+KQI I+ LP R+T LFSATQ+E+V
Sbjct: 180 ISQHLNEAVGMETSNLQVLVLDEADRCLDMGFKKQIDNILGHLPTTRQTLLFSATQSESV 239
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASS--KTPLGLHLEVIWN 169
+L++ L NP ++ V S VSA+ + L K PL L+V+W+
Sbjct: 240 NDLARLSLTNPNKIGV---SSDQEVSATPESLEQYYVKVPLDEKLDVLWS 286
>gi|254583636|ref|XP_002497386.1| ZYRO0F04312p [Zygosaccharomyces rouxii]
gi|238940279|emb|CAR28453.1| ZYRO0F04312p [Zygosaccharomyces rouxii]
Length = 602
Score = 118 bits (296), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 95/148 (64%), Gaps = 7/148 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPD----VKSVLLVGGVE--VKADVKKIEEEGANLL 55
+I++PTRELS+QI V Q F+ PD ++S LLVG + V+ D+ + +L
Sbjct: 86 SLIVTPTRELSNQIQSVIQSFLEHYPDDEHPIRSQLLVGTNQSSVRDDLANFLQNRPQIL 145
Query: 56 IGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
+GTPGR+ D ++ M + ++ +LVLDEADRLLD+ F I I+ LPK RRTGLFSA
Sbjct: 146 VGTPGRVLDFLQ-MSAVQTKSCSVLVLDEADRLLDLSFFGDIEKILKTLPKQRRTGLFSA 204
Query: 116 TQTEAVEELSKAGLRNPVRVEVRAESKS 143
T A ++ K GLRNPV++ V +++K+
Sbjct: 205 TIGSAGSQIFKTGLRNPVKITVSSKTKA 232
>gi|403157808|ref|XP_003307204.2| hypothetical protein PGTG_00154 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375163560|gb|EFP74198.2| hypothetical protein PGTG_00154 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 743
Score = 118 bits (296), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 105/180 (58%), Gaps = 40/180 (22%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPD---------------VKSVLLVGGV---EVKAD 43
+IISPTREL++Q + V F+ P +K++LL+GG +K D
Sbjct: 86 AIIISPTRELATQTFQVLNQFLENRPSPSDQASCSSDPVTPFLKAMLLIGGTGARSIKQD 145
Query: 44 VKKIEEEGANLLIGTPGRLYDIM---------ERMDVLDFR------------NLEILVL 82
+ + +E GAN+L+ TPGRL + + + D+ +F+ +LE+LVL
Sbjct: 146 LSEFQEYGANILVATPGRLEEFLFGYSSLNKRKTNDLSEFKQRSQFKTLANLKSLEVLVL 205
Query: 83 DEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT-QTEAVEELSKAGLRNPVRVEVRAES 141
DEADRLLD+GF +S I+ +LPK RRTGLFSAT + + EL +AGLRNPV+V V+ ++
Sbjct: 206 DEADRLLDLGFAPVLSNILGKLPKQRRTGLFSATLLNDGLTELIRAGLRNPVKVLVKVQT 265
>gi|407043980|gb|EKE42287.1| DEAD/DEAH box helicase, putative [Entamoeba nuttalli P19]
Length = 504
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 103/154 (66%), Gaps = 9/154 (5%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEE---GANLLIGT 58
G+IISPTREL+ QIY +A+ F ++ LL GG+ D+ +EEE GAN+++GT
Sbjct: 86 GIIISPTRELAHQIYDIAKIFCKHF-NMTIGLLTGGI----DMSTLEEEMKKGANIVVGT 140
Query: 59 PGRLYD-IMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQ 117
GR+ + I+ ++ L++ N+E+L+LDE DR+++MGF + ++ II LPK RRTGLFSAT
Sbjct: 141 AGRIEEVIVNKLFELEWNNVEVLILDEGDRMIEMGFSQSMTRIICHLPKQRRTGLFSATM 200
Query: 118 TEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQ 151
+ + + AG RNP ++++ ++ +S +++
Sbjct: 201 PKELNKFVIAGCRNPYKIQISNDNTLTPISLANE 234
>gi|440636884|gb|ELR06803.1| ATP-dependent rRNA helicase spb4 [Geomyces destructans 20631-21]
Length = 626
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 98/164 (59%), Gaps = 22/164 (13%)
Query: 2 GMIISPTRELSSQIY--------------------HVAQPFISTLPDVKSVLLVGGVEVK 41
+IISPTREL++Q++ VA PF ++ V LL+GG
Sbjct: 90 AIIISPTRELATQLHTVLLSLLGFHAPSVAKFTPSEVATPFPASTLSVVPQLLLGGTTTP 149
Query: 42 A-DVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISY 99
A D+ + NLLI TPGRL +++ V + E+LVLDEADRLLD+GF+ +
Sbjct: 150 AQDLSAFLKNSPNLLISTPGRLLELLSSPHVHCPQSSFEVLVLDEADRLLDLGFKDDLQR 209
Query: 100 IISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKS 143
I++RLPK RRTGLFSA+ +EAV E+ + GLRNPV++ V+ +S S
Sbjct: 210 ILARLPKQRRTGLFSASVSEAVGEIVRVGLRNPVKIAVKVKSLS 253
>gi|299746292|ref|XP_001837876.2| ATP-dependent RNA helicase dbp-4 [Coprinopsis cinerea okayama7#130]
gi|298406988|gb|EAU83976.2| ATP-dependent RNA helicase dbp-4 [Coprinopsis cinerea okayama7#130]
Length = 816
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 110/185 (59%), Gaps = 9/185 (4%)
Query: 2 GMIISPTRELSSQIYHVAQ---PFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGT 58
+IISPTREL+ QI+ V + PF S + L++GG +K + ++ N+L+ T
Sbjct: 128 ALIISPTRELAVQIFEVLRAIGPFHS----FSAGLVIGGKNLKDERDRLSR--MNILVAT 181
Query: 59 PGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQT 118
PGRL M++ D NL++LVLDEADR+LDMGFQ+ +S ++S LPK R+T LFSATQT
Sbjct: 182 PGRLLQHMDQTVGFDTDNLQMLVLDEADRILDMGFQRTLSALLSHLPKSRQTLLFSATQT 241
Query: 119 EAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNHHN 178
E+V +L++ L++P V V+ S S + T L L+V+W+ +
Sbjct: 242 ESVSDLARLSLKDPEYVGVKEAGSSGSYIPDSLEQHYVITELDKKLDVLWSFIKTHLQSK 301
Query: 179 LLICL 183
+L+ L
Sbjct: 302 VLVFL 306
>gi|295671346|ref|XP_002796220.1| ATP-dependent rRNA helicase SPB4 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226284353|gb|EEH39919.1| ATP-dependent rRNA helicase SPB4 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 641
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 105/185 (56%), Gaps = 35/185 (18%)
Query: 2 GMIISPTRELSSQIYHVAQ------------------------------PFISTLPDVKS 31
+IISPTREL++QIY+V Q P+ S++ +
Sbjct: 90 AIIISPTRELATQIYNVLQSLLAFHGPSATRLQSAEIGICEQNESNPPLPYPSSVLKIVP 149
Query: 32 VLLVGGVEVKA-DVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLL 89
LL+GG A D+ ++ N+LI TPGRL +++ V + E+LVLDEADRLL
Sbjct: 150 QLLLGGTTTPAQDLSTFLKQSPNVLISTPGRLLELLASPHVHCPQSSFEVLVLDEADRLL 209
Query: 90 DMGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVR---AESKSHHV 146
D+GFQ+ + I+ RLPK RRTGLFSA+ +EAV+++ + GLRNPV++ V+ A S+
Sbjct: 210 DLGFQEDLQKILQRLPKQRRTGLFSASVSEAVDQIVRVGLRNPVKISVKVKGAGSEDKRT 269
Query: 147 SASSQ 151
AS Q
Sbjct: 270 PASLQ 274
>gi|150866225|ref|XP_001385748.2| ATP dependent RNA helicase [Scheffersomyces stipitis CBS 6054]
gi|158514828|sp|A3LX02.2|SPB4_PICST RecName: Full=ATP-dependent rRNA helicase SPB4
gi|149387481|gb|ABN67719.2| ATP dependent RNA helicase [Scheffersomyces stipitis CBS 6054]
Length = 617
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 101/155 (65%), Gaps = 6/155 (3%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPD----VKSVLLVGGVE-VKADVKKIEEEGANLL 55
+ +++SPTREL+SQI V I LP+ +K+ LLVG + V+ D+ + ++ ++L
Sbjct: 95 LAIVLSPTRELASQIQSVFNNVIEYLPEDKIPIKTQLLVGSLSTVRDDLDRFLKDKPHIL 154
Query: 56 IGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
I TPGR+ D M V ++EI +LDEAD+LLD F+K + I+ RLPK RRTGLFSA
Sbjct: 155 IATPGRMLDFMSSQYV-KMNSVEIAILDEADKLLDFSFEKDVVNILKRLPKQRRTGLFSA 213
Query: 116 TQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASS 150
T + A + +AG+ NPV+V V+++S + + + S+
Sbjct: 214 TISAAGNTIFRAGMNNPVKVAVKSKSTTANSAPSA 248
>gi|452001014|gb|EMD93474.1| hypothetical protein COCHEDRAFT_1223193 [Cochliobolus
heterostrophus C5]
Length = 641
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 108/200 (54%), Gaps = 34/200 (17%)
Query: 2 GMIISPTRELSSQIYHV---------------------------AQPFISTLPD-----V 29
+IISPTREL++QIY V P T P V
Sbjct: 87 AIIISPTRELATQIYTVLASLLRFHGPSAALLDPEDEDTDMEDADAPPKPTFPPGTLRVV 146
Query: 30 KSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRL 88
+LL G V D+ + + N+LIGTPGRL +++ V + + LVLDEADRL
Sbjct: 147 PQLLLGGSVTPAQDLSRFLKSSTNVLIGTPGRLLELLSSPHVHCSQSSFDALVLDEADRL 206
Query: 89 LDMGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESK-SHHVS 147
LD+GF+ + I+SRLPK RRTGLFSA+ +EAV++L + GLRNPVR+ V+ +++ ++ +
Sbjct: 207 LDLGFKDDLQKILSRLPKQRRTGLFSASVSEAVDQLIRVGLRNPVRIAVKVKARATNSAT 266
Query: 148 ASSQQLASSKTPLGLHLEVI 167
+ + +TP L + +
Sbjct: 267 GEAGAIEDKRTPASLQMSYL 286
>gi|344233534|gb|EGV65406.1| hypothetical protein CANTEDRAFT_129665 [Candida tenuis ATCC 10573]
Length = 763
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 112/184 (60%), Gaps = 10/184 (5%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+SPTREL+ QI+ V + I + L+ GG +VK + ++ N+L+GTPGR
Sbjct: 120 ALILSPTRELAVQIFEVLKK-IGAHNQFSAGLVTGGKDVKYEKDRVSR--MNILVGTPGR 176
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ + ++ NL++LVLDEADR LDMGF+ QI I+ LPK R+T LFSAT T++V
Sbjct: 177 VAQHLNESVGMETSNLQVLVLDEADRCLDMGFKSQIDNIVGHLPKTRQTLLFSATTTDSV 236
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASS--KTPLGLHLEVIWNVNQMRNHHNL 179
++L++ L NP R+ V ++S +SA+ L K PL L+V+W+ +++H N
Sbjct: 237 KDLARLSLTNPRRIGVSSDS---DISATPDSLDQYYIKIPLEEKLDVLWSF--IKSHLNS 291
Query: 180 LICL 183
I +
Sbjct: 292 KILV 295
>gi|71029630|ref|XP_764458.1| ATP-dependent RNA helicase [Theileria parva strain Muguga]
gi|68351412|gb|EAN32175.1| ATP-dependent RNA helicase, putative [Theileria parva]
Length = 529
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/150 (45%), Positives = 98/150 (65%), Gaps = 3/150 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G+IISPTRELS QI+ VA+ LP L++GG K + K+ + G N+LI TPGR
Sbjct: 131 GLIISPTRELSLQIFEVAREVCKYLPQTLG-LVMGGANRKQEEFKLCK-GVNILIATPGR 188
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D M+ ++NL + V+DEADR+L +GF+++++ II LPK R+T LFSAT T V
Sbjct: 189 LLDHMQNTKGFVYKNLMVFVIDEADRILQIGFEQEMNQIIKLLPKNRQTSLFSATHTSNV 248
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQ 151
E+L++ L+ PV +EV + ++S VS Q
Sbjct: 249 EDLARLSLKAPVFLEVMS-NESATVSGLEQ 277
>gi|255721553|ref|XP_002545711.1| hypothetical protein CTRG_00492 [Candida tropicalis MYA-3404]
gi|240136200|gb|EER35753.1| hypothetical protein CTRG_00492 [Candida tropicalis MYA-3404]
Length = 770
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 105/170 (61%), Gaps = 8/170 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ V I + L+ GG +V+ + +++ N+L+GTPGR
Sbjct: 123 ALIISPTRELAVQIFEVLTK-IGRNNSFSAGLVTGGKDVQYEKERVSR--MNILVGTPGR 179
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ + ++ NL++LVLDEADR LDMGF+KQI I+ LP R+T LFSATQ+E+V
Sbjct: 180 ISQHLNEAVGMETSNLQVLVLDEADRCLDMGFRKQIDNILGHLPTTRQTLLFSATQSESV 239
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASS--KTPLGLHLEVIWN 169
++L++ L NP ++ V S +SA+ + L K PL L+V+W+
Sbjct: 240 KDLARLSLTNPKKIGV---SSDQEISATPESLDQYYVKVPLDEKLDVLWS 286
>gi|260790599|ref|XP_002590329.1| hypothetical protein BRAFLDRAFT_279393 [Branchiostoma floridae]
gi|229275521|gb|EEN46340.1| hypothetical protein BRAFLDRAFT_279393 [Branchiostoma floridae]
Length = 689
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 107/175 (61%), Gaps = 7/175 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI+ V + + D + L++GG +V + ++I N++I TPGR
Sbjct: 133 ALIITPTRELAYQIFEVLRK-VGKKHDFSAGLVIGGKDVTEESQQIYR--TNIVICTPGR 189
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + NL+ILVLDEADR+LD+GF ++ II LP R+T LFSATQT++V
Sbjct: 190 LLQHMDETAYFEATNLQILVLDEADRILDLGFAATMNAIIQNLPPTRQTMLFSATQTKSV 249
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
++L++ L+NPV + V HH ++ Q+L S LH ++ + ++NH
Sbjct: 250 KDLARLSLKNPVYISVH----EHHKFSTPQKLKQSYLVCELHQKLDLLFSFIKNH 300
>gi|19112748|ref|NP_595956.1| ATP-dependent RNA helicase Spb4 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74676104|sp|O74764.1|SPB4_SCHPO RecName: Full=ATP-dependent rRNA helicase spb4
gi|3687476|emb|CAA21146.1| ATP-dependent RNA helicase Spb4 (predicted) [Schizosaccharomyces
pombe]
Length = 606
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 95/150 (63%), Gaps = 12/150 (8%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPD--------VKSVLLVGGVEVKADVKKIEEEGAN 53
+I++PTREL++QI++V + ++ PD V + + G + D+ E+ +
Sbjct: 75 ALIVAPTRELATQIFNVTKELLAYQPDSLDGGKKLVADMYIGGKGTLTNDLASFREKNPS 134
Query: 54 LLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLF 113
++IGTPGRL +++ + ++LEIL+LDEAD L+DMGFQ+ + IIS+LPK RRTGLF
Sbjct: 135 VVIGTPGRLNEMLSHISS---KHLEILILDEADTLIDMGFQRTLQSIISQLPKQRRTGLF 191
Query: 114 SATQTEAVEELSK-AGLRNPVRVEVRAESK 142
SAT + V K AGLRN VRV V SK
Sbjct: 192 SATMNDTVSSFLKIAGLRNSVRVSVTVTSK 221
>gi|145351031|ref|XP_001419891.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580124|gb|ABO98184.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 485
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 93/135 (68%), Gaps = 2/135 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
M++SPTREL+ QIY+VAQ + L++GG +A+ +++ + G NLL+ TPGRL
Sbjct: 65 MVLSPTRELALQIYNVAQQLMEKHSQTHG-LIIGGANRRAEAERLIK-GVNLLVATPGRL 122
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D M+ F +L++ V+DEADR+LD+GF++++ I+ LPK R+T LFSATQT VE
Sbjct: 123 LDHMQNTRGFTFSSLKVFVMDEADRMLDIGFEEEMRTIVKMLPKERQTMLFSATQTTKVE 182
Query: 123 ELSKAGLRNPVRVEV 137
+L++ L++P+ + V
Sbjct: 183 DLARLSLKSPIYIGV 197
>gi|322698593|gb|EFY90362.1| DEAD/DEAH box helicase (Sbp4), putative [Metarhizium acridum CQMa
102]
Length = 626
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 103/186 (55%), Gaps = 29/186 (15%)
Query: 2 GMIISPTRELSSQI---------YHVAQPFI------------STLPDVKSVLLVGGVEV 40
+I+SPTREL++QI +H I +T P + LLVGG
Sbjct: 91 AIIVSPTRELAAQIHSALLSLLAFHPPSAEILPNLNDEEKRPSTTAPVIVPQLLVGGTTT 150
Query: 41 KA-DVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQIS 98
A D+ N+LI +PGRL +++ V + E+LVLDEADRLLD+GF++ +
Sbjct: 151 TAQDLSYFMRHSPNVLISSPGRLVELLSSPHVHCPQSSFEMLVLDEADRLLDLGFKQDLQ 210
Query: 99 YIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKT 158
IIS LPK RRTGLFSA+ +EAV E+ + GLRNPVR+EVR + K V L KT
Sbjct: 211 NIISHLPKQRRTGLFSASVSEAVSEIIRVGLRNPVRIEVRVKMKDGGV------LEDRKT 264
Query: 159 PLGLHL 164
P L +
Sbjct: 265 PASLQM 270
>gi|451854851|gb|EMD68143.1| hypothetical protein COCSADRAFT_33107 [Cochliobolus sativus ND90Pr]
Length = 641
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 108/200 (54%), Gaps = 34/200 (17%)
Query: 2 GMIISPTRELSSQIYHV---------------------------AQPFISTLPD-----V 29
+IISPTREL++QIY V P T P V
Sbjct: 87 AIIISPTRELATQIYTVLASLLRFHGPSAALLDPEDEDTDMEDADAPPKPTFPPGTLRVV 146
Query: 30 KSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRL 88
+LL G V D+ + + N+LIGTPGRL +++ V + + LVLDEADRL
Sbjct: 147 PQLLLGGSVTPAQDLSRFLKSSTNILIGTPGRLLELLSSPHVHCSQSSFDALVLDEADRL 206
Query: 89 LDMGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESK-SHHVS 147
LD+GF+ + I+SRLPK RRTGLFSA+ +EA+++L + GLRNPVR+ V+ +++ ++ +
Sbjct: 207 LDLGFKDDLQKILSRLPKQRRTGLFSASVSEAIDQLIRVGLRNPVRIAVKVKARAANSAT 266
Query: 148 ASSQQLASSKTPLGLHLEVI 167
+ + +TP L + +
Sbjct: 267 GEAGAIEDKRTPASLQMSYL 286
>gi|209881955|ref|XP_002142415.1| DEAD/DEAH box ATP-dependent RNA helicase [Cryptosporidium muris
RN66]
gi|209558021|gb|EEA08066.1| DEAD/DEAH box ATP-dependent RNA helicase, putative [Cryptosporidium
muris RN66]
Length = 506
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 93/149 (62%), Gaps = 2/149 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++ISPTRELS QIY V + LP L++GG + + K+ + G N+LI TPGRL
Sbjct: 89 IVISPTRELSLQIYEVCRELCKYLPQTHG-LVIGGANRRNEADKLNK-GVNILIATPGRL 146
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++ + NL L++DEADR+L++GF+++++ II LP R+T LFSATQT V
Sbjct: 147 LDHLQNTKGFQYGNLLSLIIDEADRILEIGFEEEMNQIIKLLPVKRQTSLFSATQTTKVA 206
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQ 151
+L + LRNPV ++ + + + VS Q
Sbjct: 207 DLVRLSLRNPVLIKCKTSNTAATVSGLEQ 235
>gi|340518350|gb|EGR48591.1| predicted protein [Trichoderma reesei QM6a]
Length = 610
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 98/163 (60%), Gaps = 22/163 (13%)
Query: 2 GMIISPTRELSSQI---------YHVAQPFI------------STLPDVKSVLLVGGVEV 40
++ISPTREL++QI +H I +T+P + LLVGG
Sbjct: 83 AIVISPTRELAAQIHTVLLSLLEFHAPSAEILPHLKGEDKRPSNTVPAIVPQLLVGGTTT 142
Query: 41 KA-DVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISY 99
A D+ NLLI +PGRL +++ V ++ E+LVLDEADRLLD+GF++ +
Sbjct: 143 PAQDLSYFVRHSPNLLISSPGRLVELLGSRHVHIDQSFEVLVLDEADRLLDLGFKQDLQT 202
Query: 100 IISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESK 142
I+S LPK RRTGLFSA+ +EAV E+ + GLRNPV++EV+ + K
Sbjct: 203 ILSHLPKQRRTGLFSASVSEAVGEIIRVGLRNPVKIEVKVKMK 245
>gi|392566903|gb|EIW60078.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 682
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 103/168 (61%), Gaps = 27/168 (16%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKS----------------------VLLVGGVE 39
+IISPTREL++QI+ + F+S+ P + +L++
Sbjct: 87 ALIISPTRELATQIHSIFSLFLSSQPSRYAASPSPDEASGSNVQLEPEYPSPLLMISSDS 146
Query: 40 VKA-DVKKIEEEGANLLIGTPGRLYDIM--ERMDVLDFRNLEILVLDEADRLLDMGFQKQ 96
A DV++ GA+++IGTPGR+ + + + +V+ + LE+LVLDEADRLLD+GFQ
Sbjct: 147 PPAEDVQRFLSTGADIVIGTPGRVEEFLLGKGKNVVSVKELEVLVLDEADRLLDLGFQAA 206
Query: 97 ISYIISRLPKLRRTGLFSATQT--EAVEELSKAGLRNPVRVEVRAESK 142
+S I++ LPK RRTGLFSAT T +A+ EL + GLRNP R+ V+ +SK
Sbjct: 207 LSRILTHLPKQRRTGLFSATMTDADALSELVRVGLRNPARIVVKVQSK 254
>gi|308808320|ref|XP_003081470.1| ATP-dependent RNA helicase (ISS) [Ostreococcus tauri]
gi|116059933|emb|CAL55992.1| ATP-dependent RNA helicase (ISS), partial [Ostreococcus tauri]
Length = 777
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 93/135 (68%), Gaps = 2/135 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
M++SPTREL+ QIY+VAQ + L++GG +A+ +++ + G NLL+ TPGRL
Sbjct: 242 MVLSPTRELALQIYNVAQQLMEKHSQTHG-LIIGGANRRAEAERLIK-GVNLLVATPGRL 299
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D M+ F +L++ V+DEADR+LD+GF++++ I+ LPK R+T LFSATQT VE
Sbjct: 300 LDHMQNTRGFTFSSLKVFVMDEADRMLDIGFEEEMRTIVKMLPKERQTMLFSATQTTKVE 359
Query: 123 ELSKAGLRNPVRVEV 137
+L++ L++P+ + V
Sbjct: 360 DLARLSLKSPIYIGV 374
>gi|356533342|ref|XP_003535224.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
18-like [Glycine max]
Length = 381
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/86 (69%), Positives = 69/86 (80%)
Query: 79 ILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVR 138
I +LDEADRLL MGFQK I+ II+ LPKL+RT LFS TQ EA+EEL+KA LRNPVRVEVR
Sbjct: 92 IFILDEADRLLGMGFQKHITSIITLLPKLQRTSLFSTTQIEAIEELAKARLRNPVRVEVR 151
Query: 139 AESKSHHVSASSQQLASSKTPLGLHL 164
AE KS + SASS+ SSKTP LH+
Sbjct: 152 AEKKSKNGSASSKHPESSKTPSRLHI 177
>gi|149184420|ref|ZP_01862738.1| DNA and RNA helicase [Erythrobacter sp. SD-21]
gi|148831740|gb|EDL50173.1| DNA and RNA helicase [Erythrobacter sp. SD-21]
Length = 359
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 101/156 (64%), Gaps = 4/156 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++Q+ + + D+K LL+GGV++ +K + E G ++LI TPGRL
Sbjct: 76 LILAPTRELAAQVAENFEKYGKNH-DLKLALLIGGVQMGDQIKALNE-GVDVLIATPGRL 133
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ ER +L E+LV+DEADR+LDMGF I +I S+LP+ R+T LFSAT +E
Sbjct: 134 MDLFERGKIL-LNGCELLVIDEADRMLDMGFIPDIEFICSKLPEQRQTMLFSATMPPPIE 192
Query: 123 ELSKAGLRNPVRVEV-RAESKSHHVSASSQQLASSK 157
+L+K L NP R+EV RA + + ++A + S K
Sbjct: 193 KLAKKFLDNPKRIEVSRAATTNKDITAFKIPVESRK 228
>gi|66802950|ref|XP_635318.1| hypothetical protein DDB_G0291588 [Dictyostelium discoideum AX4]
gi|74896812|sp|Q54EC2.1|DDX55_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx55; AltName:
Full=DEAD box protein 55
gi|60463593|gb|EAL61778.1| hypothetical protein DDB_G0291588 [Dictyostelium discoideum AX4]
Length = 663
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 98/195 (50%), Gaps = 47/195 (24%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDV-------------------------------- 29
+IISPTREL+ QI V F++ L +
Sbjct: 86 SIIISPTRELAIQIQQVLLEFLNDLNRIDDQNDLENIKTLEDELLEEQEEEENEKEEEEI 145
Query: 30 -----------KSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERM----DVLDF 74
S+LL+GG ++ D+ + G N+LIGTPGR + + R+ F
Sbjct: 146 EKKKKKKKIEISSLLLIGGTDIYQDLVNYKNYGGNILIGTPGRTDEFLTRVVRNDQQFKF 205
Query: 75 RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVR 134
+ E+L+LDEADRLLDMGF I+ I+ +LPK RRTGLFSATQT V+EL++ G+RNP +
Sbjct: 206 KEFEMLILDEADRLLDMGFHLPINSILLKLPKQRRTGLFSATQTSEVKELARTGMRNPFK 265
Query: 135 VEVRAESKSHHVSAS 149
V V + H S
Sbjct: 266 VSVSVKHIETHEDQS 280
>gi|332025244|gb|EGI65418.1| Putative ATP-dependent RNA helicase DDX10 [Acromyrmex echinatior]
Length = 795
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 109/175 (62%), Gaps = 7/175 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QIY + + + + L++GG ++K + K++++ N++I TPGR
Sbjct: 115 SLIITPTRELAYQIYETLRK-VGQYHSISAGLIIGGKDLKFEKKRMDQ--CNVIICTPGR 171
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + + N++ILVLDEADR LDMGF+K ++ II LP R+T LFSATQT++V
Sbjct: 172 LLQHMDENPLFNCVNMQILVLDEADRCLDMGFEKTMNSIIENLPPKRQTLLFSATQTKSV 231
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
++L++ L++P+ V V S H + Q + L L ++W+ +RNH
Sbjct: 232 KDLARLSLKDPLYVSVHEHSA--HTTPEGLQQSYIICSLEDKLAMLWSF--IRNH 282
>gi|366997228|ref|XP_003678376.1| hypothetical protein NCAS_0J00580 [Naumovozyma castellii CBS 4309]
gi|342304248|emb|CCC72037.1| hypothetical protein NCAS_0J00580 [Naumovozyma castellii CBS 4309]
Length = 611
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 97/152 (63%), Gaps = 9/152 (5%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPD----VKSVLLVGGVE--VKADVKKIEEEGANLLI 56
+I+SPTRELS QI V F+ P+ +++ LLVG E V+ DV + E +L+
Sbjct: 87 LIVSPTRELSKQIKSVIDQFLEHYPEDQYPIRAQLLVGTNESTVRDDVNDLIENRPQILV 146
Query: 57 GTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
GTPGR+ D ++ M V+ + +++LDEADRLLD+ F K + I+S LPK RRTGLFSAT
Sbjct: 147 GTPGRILDFLQ-MPVVKTTSCSMVILDEADRLLDVSFVKDVERILSVLPKQRRTGLFSAT 205
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSA 148
+ A + K GLRNPV++ V SK+H S+
Sbjct: 206 ISSAGNTIFKTGLRNPVKITV--NSKNHAPSS 235
>gi|189190920|ref|XP_001931799.1| ATP-dependent rRNA helicase spb4 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187973405|gb|EDU40904.1| ATP-dependent rRNA helicase spb4 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 641
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 107/201 (53%), Gaps = 35/201 (17%)
Query: 2 GMIISPTRELSSQIYHV---------------------------AQPFISTLPD-----V 29
+IISPTREL++QI+ V P T P V
Sbjct: 87 AIIISPTRELATQIHTVLSSLLRFHAPSAALLDPEDEDTDMEDAGAPPKPTFPPGTLKVV 146
Query: 30 KSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRL 88
+LL G V D+ + + N+LIGTPGRL +++ V + + LVLDEADRL
Sbjct: 147 PQLLLGGSVTPAQDLSRFLKSSTNVLIGTPGRLLELLSSPHVHCSQSSFDALVLDEADRL 206
Query: 89 LDMGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVR--VEVRAESKSHHV 146
LD+GF + I+SR+PK RRTGLFSA+ +EAV++L + GLRNPVR V+V+A + S+
Sbjct: 207 LDLGFSADLQKILSRIPKQRRTGLFSASVSEAVDQLIRVGLRNPVRIAVKVKARAASNGT 266
Query: 147 SASSQQLASSKTPLGLHLEVI 167
+ + + KTP L + +
Sbjct: 267 TGEAGVIEDRKTPASLQMSYL 287
>gi|449515263|ref|XP_004164669.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 32-like [Cucumis
sativus]
Length = 734
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 115/182 (63%), Gaps = 6/182 (3%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGG-VEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL +Q++ V + + + + LL+GG +V + + + E N+L+ TPGR
Sbjct: 143 IIISPTRELGAQLFDVLKA-VGKFHNFSAGLLIGGRKDVNTEKEHVNE--LNILVCTPGR 199
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ D L++LVLDEADR+LD+GF+K ++ IIS+LPK R+T LFSATQT++V
Sbjct: 200 LLQHMDETPNFDCSQLQVLVLDEADRILDVGFKKTLNAIISQLPKHRQTFLFSATQTKSV 259
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNHHNLLI 181
++L++ L++P + V ES + + +S Q + PL L+++W+ + + +L+
Sbjct: 260 QDLARLSLKDPEYLSVHEESTT--ATPNSLQQTAMVVPLEQKLDMLWSFIKAHLNSKILV 317
Query: 182 CL 183
L
Sbjct: 318 FL 319
>gi|449470439|ref|XP_004152924.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 32-like [Cucumis
sativus]
Length = 734
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 115/182 (63%), Gaps = 6/182 (3%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGG-VEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL +Q++ V + + + + LL+GG +V + + + E N+L+ TPGR
Sbjct: 143 IIISPTRELGAQLFDVLKA-VGKFHNFSAGLLIGGRKDVNTEKEHVNE--LNILVCTPGR 199
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ D L++LVLDEADR+LD+GF+K ++ IIS+LPK R+T LFSATQT++V
Sbjct: 200 LLQHMDETPNFDCSQLQVLVLDEADRILDVGFKKTLNAIISQLPKHRQTFLFSATQTKSV 259
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNHHNLLI 181
++L++ L++P + V ES + + +S Q + PL L+++W+ + + +L+
Sbjct: 260 QDLARLSLKDPEYLSVHEESTT--ATPNSLQQTAMVVPLEQKLDMLWSFIKAHLNSKILV 317
Query: 182 CL 183
L
Sbjct: 318 FL 319
>gi|149236686|ref|XP_001524220.1| hypothetical protein LELG_04190 [Lodderomyces elongisporus NRRL
YB-4239]
gi|152013482|sp|A5E3K3.1|DBP4_LODEL RecName: Full=ATP-dependent RNA helicase DBP4
gi|146451755|gb|EDK46011.1| hypothetical protein LELG_04190 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 775
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 104/170 (61%), Gaps = 8/170 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+SPTREL+ QI+ V I + L+ GG +V+ + ++I N+L+GTPGR
Sbjct: 123 ALIVSPTRELAVQIFEVLAK-IGKYNSFSAGLVTGGKDVQYEKERISR--MNILVGTPGR 179
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ + ++ NL++LVLDEADR LDMGF+KQI I++ LP+ R+T LFSAT T++V
Sbjct: 180 ISQHLNESVGMETSNLQVLVLDEADRCLDMGFRKQIDNILNHLPRTRQTLLFSATHTDSV 239
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASS--KTPLGLHLEVIWN 169
++L++ L NP R+ S +SA + L K PL L+V+W+
Sbjct: 240 QDLARLSLTNPKRI---GTSSDQDISAIPESLDQYYVKVPLNEKLDVLWS 286
>gi|170095563|ref|XP_001879002.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646306|gb|EDR10552.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 654
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 103/168 (61%), Gaps = 3/168 (1%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ V + I + L++GG +K + ++ N+L+ TPGR
Sbjct: 76 ALIISPTRELAVQIFDVLRS-IGGYHSFSAGLVIGGKNLKDERDRLSR--MNILVATPGR 132
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M++ D NL++LVLDEADR+LDMGFQK ++ ++S LPK R+T LFSATQT++V
Sbjct: 133 LLQHMDQTVGFDADNLQVLVLDEADRILDMGFQKTLAALLSHLPKSRQTLLFSATQTQSV 192
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWN 169
+L++ L++PV V + S S + + L L+V+W+
Sbjct: 193 SDLARLSLKDPVYVGINVASSSTSTMPQNLEQHYVICELDKKLDVLWS 240
>gi|324508397|gb|ADY43545.1| ATP-dependent RNA helicase pitchoune [Ascaris suum]
Length = 574
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 91/136 (66%), Gaps = 2/136 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++ISPTRELS Q Y V + P + L++GG +A+V+K+ + G N L+ TPGRL
Sbjct: 169 IVISPTRELSMQTYGVLSELLEKHPAITHGLVMGGANRQAEVQKLVK-GVNFLVATPGRL 227
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++ D RNL+ L++DEADR+LD+GF+ ++ +I+ LPK R+T LFSATQT V
Sbjct: 228 LDHLQNTDDFVVRNLKCLIVDEADRILDIGFEIEMQHILRILPKKRQTMLFSATQTAKVN 287
Query: 123 ELSKAGLR-NPVRVEV 137
EL KA L +P+R+ +
Sbjct: 288 ELIKAALHSDPLRIGI 303
>gi|157135755|ref|XP_001663578.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108870126|gb|EAT34351.1| AAEL013400-PA [Aedes aegypti]
Length = 727
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 107/180 (59%), Gaps = 5/180 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI+ I L D + L++GG +KA+ ++ + N++I TPGR
Sbjct: 137 ALIITPTRELALQIFETVAK-IGKLHDFTTGLIIGGQNLKAEKNRLHQ--LNIIICTPGR 193
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M++ + D NL+ILVLDEADR LD+GF+ ++ II LP R+T LFSATQT++V
Sbjct: 194 LLQHMDQNPLFDCTNLKILVLDEADRCLDLGFESAMNAIIENLPSERQTLLFSATQTKSV 253
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNHHNLLI 181
++L++ LRNP + K + + + Q LG L ++W+ + + +++
Sbjct: 254 KDLARLNLRNPQYIA--PHEKEQYTTPTRLQQNYVAVELGQKLTMLWSFLKAHSKQKIIV 311
>gi|345492365|ref|XP_001600475.2| PREDICTED: probable ATP-dependent RNA helicase DDX10-like [Nasonia
vitripennis]
Length = 825
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 108/175 (61%), Gaps = 7/175 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QIY + + D+ + L++GG ++ + K++++ N++I TPGR
Sbjct: 116 ALIITPTRELAYQIYETLRK-VGRYHDISAGLIIGGKDLHFEKKRLDQ--CNIIICTPGR 172
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + D N++ILVLDEADR LDMGF+K ++ II LP R+T LFSATQT+ V
Sbjct: 173 LLQHMDENPLFDCVNMKILVLDEADRCLDMGFEKTMNSIIENLPLERQTLLFSATQTKTV 232
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
++L++ L++P+ + V + H + Q + L L ++W+ +RNH
Sbjct: 233 KDLARLSLKDPLYISVH--ENAAHTTPEGLQQSYIVCELEEKLAMLWSF--IRNH 283
>gi|403413688|emb|CCM00388.1| predicted protein [Fibroporia radiculosa]
Length = 676
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 103/167 (61%), Gaps = 27/167 (16%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLP--DVK--------------------SVLLVGGVE 39
+IISPTREL++QI+ V F+S+ P D+ +L+V
Sbjct: 86 ALIISPTRELATQIHSVFSLFLSSQPGSDISLDEDRPITSSTSSSNLTCPPPLLVVSSDS 145
Query: 40 VKAD-VKKIEEEGANLLIGTPGRLYDIM--ERMDVLDFRNLEILVLDEADRLLDMGFQKQ 96
AD +K+ GA++++GTPGR+ + + D+++ + LE+LVLDEADRLLD+GFQ
Sbjct: 146 PPADDIKRFLSTGADIVVGTPGRIEEFLLGRGRDIVNVKELEVLVLDEADRLLDLGFQNT 205
Query: 97 ISYIISRLPKLRRTGLFSATQT--EAVEELSKAGLRNPVRVEVRAES 141
++ I++ LPK RRTGLFSAT T +A+ EL + GLRNP R+ V+ ++
Sbjct: 206 LTRILTHLPKQRRTGLFSATMTDADALSELVRVGLRNPARIVVKVQT 252
>gi|241557720|ref|XP_002400037.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
gi|215499738|gb|EEC09232.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
Length = 346
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 111/177 (62%), Gaps = 11/177 (6%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+P REL+ QI+ V + + D + L++GG ++K + K+++ N++I TPGR
Sbjct: 146 ALIITPVRELAYQIFEVLKK-VGVHHDFSAGLVIGGKDLKFERKRMD--SCNIVICTPGR 202
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + D L+ILVLDEADR+LDMGFQ+ ++ I+ LP R+T LFSATQT++V
Sbjct: 203 LLQHMDENPLFDATQLQILVLDEADRILDMGFQQSVNAILENLPVERQTLLFSATQTKSV 262
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLH--LEVIWNVNQMRNH 176
++L++ L++PV V V +K + + L S T LH L ++W+ +R+H
Sbjct: 263 KDLARLSLKSPVYVSVHENAK----FTTPEALVQSYTVCDLHNKLNLLWSF--IRSH 313
>gi|339232688|ref|XP_003381461.1| putative DEAD/DEAH box helicase [Trichinella spiralis]
gi|316979731|gb|EFV62485.1| putative DEAD/DEAH box helicase [Trichinella spiralis]
Length = 798
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 93/141 (65%), Gaps = 3/141 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ Q Y + + D + L++GG + + ++I + +NL++ TPGR
Sbjct: 171 ALIISPTRELALQTYETFCK-VGCMHDFSAALVIGGTDADYEKRRIGQ--SNLVVCTPGR 227
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + D L+I+VLDEADR+LD+GF Q++ II LP+ R+T L+SATQT++V
Sbjct: 228 LLQHMDENPLFDTTQLQIIVLDEADRILDLGFSAQLNAIIENLPETRQTLLYSATQTKSV 287
Query: 122 EELSKAGLRNPVRVEVRAESK 142
++L++ L+NPV V V SK
Sbjct: 288 KDLARLSLKNPVYVSVHENSK 308
>gi|255563905|ref|XP_002522952.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223537764|gb|EEF39382.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 753
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 112/181 (61%), Gaps = 4/181 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q++ V + + + + LL+GG + D +K N+L+ TPGRL
Sbjct: 141 IIISPTRELAGQLFDVLRN-VGKFHNFSAGLLIGGRK-DIDTEKESVNELNILVCTPGRL 198
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ D L++LVLDEADR+LD+GF+K ++ IIS++PK R+T LFSATQT++V+
Sbjct: 199 LQHMDETPNFDCSQLQVLVLDEADRILDVGFKKTLNAIISQIPKYRQTLLFSATQTKSVQ 258
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNHHNLLIC 182
+L++ L++P V V KS + + Q + PL L+++W+ + + N+L+
Sbjct: 259 DLARLSLKDPEYVGV--HEKSDTATPNRLQQTAMVVPLEQKLDMLWSFIKAHLNSNILVF 316
Query: 183 L 183
L
Sbjct: 317 L 317
>gi|429329903|gb|AFZ81662.1| DEAD box ATP-dependent RNA helicase family member protein [Babesia
equi]
Length = 501
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 91/136 (66%), Gaps = 2/136 (1%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G+IISPTRELS QIY VA+ LP L++GG K + +K+ G N+LI TPGR
Sbjct: 112 GIIISPTRELSLQIYEVAKDICKYLPQTLG-LVMGGANRKQEAEKLVR-GVNILIATPGR 169
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D M+ F+NL + ++DEADR+L++GF+++++ II LP+ R+T LFSAT V
Sbjct: 170 LLDHMQNTKGFVFKNLLLFIIDEADRILEIGFEEELNQIIKLLPEKRQTCLFSATHGSNV 229
Query: 122 EELSKAGLRNPVRVEV 137
E+L++ L++P+ +E
Sbjct: 230 EDLARLSLKSPIFLEA 245
>gi|389748950|gb|EIM90127.1| DEAD-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 674
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 103/170 (60%), Gaps = 28/170 (16%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVK----------------------SVLLVGGVE 39
++ISPTREL+SQI+ + F+S+ P + +LLV +
Sbjct: 87 ALVISPTRELASQIHSIFSLFLSSQPGTEHPDPDEDVPSTSEPSSSTRLPPPLLLVSSAQ 146
Query: 40 VKA--DVKKIEEEGANLLIGTPGRLYDIM--ERMDVLDFRNLEILVLDEADRLLDMGFQK 95
DV++ GA+++IGTPGR+ + + + + + + LE+L+LDEADRLLD+GFQ+
Sbjct: 147 SSPVQDVQRFVATGADIIIGTPGRVEEFLLGKGKNAVSTKELEVLILDEADRLLDLGFQQ 206
Query: 96 QISYIISRLPKLRRTGLFSATQT--EAVEELSKAGLRNPVRVEVRAESKS 143
++ I+ LPK RRTGLFSAT T +A+ EL + GLRNP R+ V+ +SK+
Sbjct: 207 TLTRILMHLPKQRRTGLFSATMTDADALSELVRVGLRNPARIVVKVQSKA 256
>gi|407923726|gb|EKG16791.1| RNA helicase ATP-dependent DEAD-box conserved site [Macrophomina
phaseolina MS6]
Length = 631
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 106/197 (53%), Gaps = 31/197 (15%)
Query: 2 GMIISPTRELSSQIYHV-------------------------AQPFI--STLPDVKSVLL 34
+IISPTREL++QI++V QP STL + +LL
Sbjct: 88 AIIISPTRELATQIHNVLTSLLAFHAPSAAALRAQTGTSDDDGQPSFPSSTLKVIPQLLL 147
Query: 35 VGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGF 93
G D+ + NLLI TPGRL +++ V + E+LV+DEADRLLD+GF
Sbjct: 148 GGSTTPAQDLSTFLKTSPNLLIATPGRLLELLSSPHVHCPQSSFEVLVMDEADRLLDLGF 207
Query: 94 QKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHV---SASS 150
+ + I+ RLPK RRTGLFSA+ +EAV +L + GLRNPVR+ V+ +S S V + +S
Sbjct: 208 KDDLQKILQRLPKQRRTGLFSASVSEAVSQLVRVGLRNPVRIAVKVKSASGAVDKRTPAS 267
Query: 151 QQLASSKTPLGLHLEVI 167
Q+ TP L I
Sbjct: 268 LQMTYLLTPPSHKLPAI 284
>gi|169606838|ref|XP_001796839.1| hypothetical protein SNOG_06469 [Phaeosphaeria nodorum SN15]
gi|121748600|sp|Q0UP45.1|SPB4_PHANO RecName: Full=ATP-dependent rRNA helicase SPB4
gi|111065180|gb|EAT86300.1| hypothetical protein SNOG_06469 [Phaeosphaeria nodorum SN15]
Length = 633
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 108/199 (54%), Gaps = 36/199 (18%)
Query: 2 GMIISPTRELSSQIYHVAQPFIS--------------------------------TLPDV 29
+IISPTREL++QI+ V + TL V
Sbjct: 87 AIIISPTRELATQIHTVLSSLLKFHAPSAAMLEPDDEDTDMEDADTPPKPTFPPGTLKAV 146
Query: 30 KSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRL 88
+LL G V D+ ++ N+LIGTPGRL +++ V + + LV+DEADRL
Sbjct: 147 PQLLLGGSVTPAQDLSAFLKKSPNILIGTPGRLLELLRSPHVHCPQSSFDALVMDEADRL 206
Query: 89 LDMGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSA 148
LD+GF++ + IISRLPK RRTGLFSA+ +EAV++L + GLRNPVR+ V+ ++++ +
Sbjct: 207 LDLGFKEDLQKIISRLPKQRRTGLFSASMSEAVDQLIRVGLRNPVRIAVKVKARA---TG 263
Query: 149 SSQQLASSKTPLGLHLEVI 167
++ +TP L + +
Sbjct: 264 EDGKIEDKRTPASLQMSYL 282
>gi|448528823|ref|XP_003869760.1| Hca4 protein [Candida orthopsilosis Co 90-125]
gi|380354114|emb|CCG23627.1| Hca4 protein [Candida orthopsilosis]
Length = 755
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 102/170 (60%), Gaps = 8/170 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+SPTREL+ QI+ V I + L+ GG +V+ + ++I N+L+GTPGR
Sbjct: 123 ALIVSPTRELAVQIFEVLAK-IGKYNSFSAGLVTGGKDVQYEKERISR--MNILVGTPGR 179
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ + ++ NL++LVLDEADR LDMGF+KQI IIS LP R+T LFSAT T++V
Sbjct: 180 ISQHLNEAVGMETSNLQVLVLDEADRCLDMGFKKQIDNIISHLPPTRQTLLFSATTTDSV 239
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASS--KTPLGLHLEVIWN 169
+L++ L NP R+ S VSA + L + PL L+V+W+
Sbjct: 240 RDLARLSLTNPKRI---GTSSDQDVSAIPESLDQYYVRVPLEEKLDVLWS 286
>gi|409079671|gb|EKM80032.1| hypothetical protein AGABI1DRAFT_120066 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 666
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 100/167 (59%), Gaps = 26/167 (15%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKS--------------------VLLVGGVEVK 41
++ISPTREL+SQI+ V F+ + P + +LLV +
Sbjct: 87 ALVISPTRELASQIHSVFSLFLDSQPCQEEFNEGSQESQSQQSKLQYPSPLLLVSSSQST 146
Query: 42 A--DVKKIEEEGANLLIGTPGRLYDIMERM--DVLDFRNLEILVLDEADRLLDMGFQKQI 97
D+++ GA+++IGTPGR+ + + R + + + E+LVLDEADRLLD+GFQ +
Sbjct: 147 PAQDIERFLSSGADIVIGTPGRVEEFLLRRGRNTVSVKEFEVLVLDEADRLLDLGFQDIL 206
Query: 98 SYIISRLPKLRRTGLFSATQT--EAVEELSKAGLRNPVRVEVRAESK 142
II+ LPK RRTGLFSAT T +A+ EL +AGLRNP RV V+ ++K
Sbjct: 207 GRIITHLPKQRRTGLFSATMTDADAMTELVRAGLRNPARVIVKVQAK 253
>gi|358377850|gb|EHK15533.1| hypothetical protein TRIVIDRAFT_64569 [Trichoderma virens Gv29-8]
Length = 626
Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 96/163 (58%), Gaps = 22/163 (13%)
Query: 2 GMIISPTRELSSQIYHVAQPFI---------------------STLPDVKSVLLVGGVEV 40
++ISPTREL++QI+ V + S +P + LLVGG
Sbjct: 91 AIVISPTRELAAQIHTVLMSLLEFHAPSAEILPHLKGEEKRPSSAVPAIVPQLLVGGTTT 150
Query: 41 KA-DVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISY 99
A D+ NLLI +PGRL +++ V ++ E LVLDEADRLLD+GF++ +
Sbjct: 151 PAQDLSYFVRHNPNLLISSPGRLVELLASPHVHIDQSFEALVLDEADRLLDLGFKQDLQT 210
Query: 100 IISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESK 142
I+S LPK RRTGLFSA+ +EAV E+ + GLRNPV++EV+ + K
Sbjct: 211 ILSHLPKQRRTGLFSASVSEAVGEIIRVGLRNPVKIEVKVKMK 253
>gi|193652513|ref|XP_001948824.1| PREDICTED: probable ATP-dependent RNA helicase DDX10-like
[Acyrthosiphon pisum]
Length = 786
Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 112/184 (60%), Gaps = 9/184 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI+ + I D + L++GG ++K + K++++ N++I TPGR
Sbjct: 115 ALIITPTRELAYQIFETLRK-IGIHHDFSAGLIIGGKDLKFERKRLDQ--CNIMICTPGR 171
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + D N+ +LVLDEADR LDMGFQ+ ++ II LP R+T LFSATQT++V
Sbjct: 172 LLQHMDENPLFDCSNMLVLVLDEADRCLDMGFQQTMNSIIENLPPERQTLLFSATQTKSV 231
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLH--LEVIWNVNQMRNHHNL 179
++L + L NP + V +S+ H + S L S LH + ++W+ + HH +
Sbjct: 232 KDLVRLSLSNPHLISVHEDSE--HSTPSG--LVQSYMVCDLHDKMSLLWSFIKNHLHHKV 287
Query: 180 LICL 183
L+ +
Sbjct: 288 LVFM 291
>gi|365985399|ref|XP_003669532.1| hypothetical protein NDAI_0C06300 [Naumovozyma dairenensis CBS 421]
gi|343768300|emb|CCD24289.1| hypothetical protein NDAI_0C06300 [Naumovozyma dairenensis CBS 421]
Length = 614
Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 93/146 (63%), Gaps = 7/146 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPD----VKSVLLVGGVE--VKADVKKIEEEGANLL 55
+IISPTREL+ Q V F+ PD +K+ LLVG E V+ DV E +L
Sbjct: 87 SLIISPTRELAKQTKIVIDEFLKQYPDDMYPIKAQLLVGTNENTVRDDVNDFLENKPQIL 146
Query: 56 IGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
+GTPGRL D ++ M + + ++++DEADRLLD+ F K + I+S LPK RRTGLFSA
Sbjct: 147 VGTPGRLLDFLQ-MTSVKTSSCGMVIIDEADRLLDISFVKDVEKILSVLPKQRRTGLFSA 205
Query: 116 TQTEAVEELSKAGLRNPVRVEVRAES 141
T + A + + K GLRNPV+++V +++
Sbjct: 206 TISSAGDSIFKTGLRNPVKIKVNSKN 231
>gi|46138763|ref|XP_391072.1| hypothetical protein FG10896.1 [Gibberella zeae PH-1]
gi|91208170|sp|Q4HVW2.1|SPB4_GIBZE RecName: Full=ATP-dependent rRNA helicase SPB4
Length = 637
Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 105/188 (55%), Gaps = 32/188 (17%)
Query: 2 GMIISPTRELSSQIYHV-----------------------AQPFISTLPDVKSVLLVGGV 38
+I+SPTREL++QI+ V +PF +T+P + LLVGG
Sbjct: 90 AIIVSPTRELAAQIHTVLMKLLQFHEASAEILPHLKDDDEKRPF-TTVPAIVPQLLVGGT 148
Query: 39 EVKA-DVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQ 96
D++ N+LI +PGRL ++M V + E+LVLDEADRLLD+GF+
Sbjct: 149 TTTVQDLRFFLRHSPNVLISSPGRLVELMSSPHVHCPQSSFEVLVLDEADRLLDLGFKPD 208
Query: 97 ISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASS 156
+ I+S LPK RRTGLFSA+ +EAV E+ + GLRNPV++EV+ + K + L
Sbjct: 209 LQKILSHLPKQRRTGLFSASVSEAVGEIIRVGLRNPVKIEVKVKIKGGGI------LEDR 262
Query: 157 KTPLGLHL 164
KTP L +
Sbjct: 263 KTPASLQM 270
>gi|353240793|emb|CCA72645.1| probable HCA4-can suppress the U14 snoRNA rRNA processing function
[Piriformospora indica DSM 11827]
Length = 769
Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 101/152 (66%), Gaps = 6/152 (3%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ V + I + L++GG +K + ++ + N+L+ TPGR
Sbjct: 125 ALIISPTRELAMQIFDVLRK-IGGYHTFSAGLVIGGKNLKDESDRLAK--MNILVATPGR 181
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M++ D NL++LVLDEADR+LDMGF K ++ I++ LPK R+T LFSATQTE+V
Sbjct: 182 LLQHMDQTVGFDCENLQLLVLDEADRILDMGFAKALNAIVAHLPKSRQTLLFSATQTESV 241
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQL 153
+L++ L++PV V V+ E+ H +A+ + L
Sbjct: 242 SDLARLSLKDPVHVGVKEEN---HDAATPKGL 270
>gi|449545829|gb|EMD36799.1| hypothetical protein CERSUDRAFT_114703 [Ceriporiopsis subvermispora
B]
Length = 766
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 109/170 (64%), Gaps = 8/170 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ V + I + L++GG VK + ++ + N+L+ TPGR
Sbjct: 85 ALIISPTRELAVQIFDVLRS-IGGYHSFSAGLVIGGKNVKDERDRLSK--MNILVATPGR 141
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M++ + NL++LVLDEADR+LDMGF++ +S ++S LPK R+T LFSATQTE+V
Sbjct: 142 LLQHMDQTIGFECDNLQVLVLDEADRILDMGFKRTLSALLSHLPKSRQTLLFSATQTESV 201
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSK--TPLGLHLEVIWN 169
+L++ L++PV V V+ ++H+ A+ + L L L+++W+
Sbjct: 202 ADLARLSLKDPVYVGVK---EAHNEGATPKGLEQHYVVCELDKKLDILWS 248
>gi|443926182|gb|ELU44901.1| putative ATP-dependent RNA helicase [Rhizoctonia solani AG-1 IA]
Length = 809
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 102/156 (65%), Gaps = 8/156 (5%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ QI+HVA+ +S +++GG KA+V+K+++ G NLL+ TPGRL
Sbjct: 118 IIISPTRELALQIFHVAKEVMSGHHSQTFGIVMGGANRKAEVEKLQK-GVNLLVATPGRL 176
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKL----RRTGLFSATQT 118
D ++ FRNL+ LV+DEADR+L++GF++++ IIS LP + R++ LFSATQT
Sbjct: 177 LDHLQNTKGFVFRNLKGLVIDEADRILEIGFEEEMKQIISILPNVYAENRQSMLFSATQT 236
Query: 119 EAVEELSKAGLR---NPVRVEVRAESKSHHVSASSQ 151
V +L++ LR P+ + V +ES V SQ
Sbjct: 237 TKVSDLARISLRQTPGPLHINVESESAPSTVDTLSQ 272
>gi|408390570|gb|EKJ69962.1| hypothetical protein FPSE_09807 [Fusarium pseudograminearum CS3096]
Length = 637
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 104/187 (55%), Gaps = 30/187 (16%)
Query: 2 GMIISPTRELSSQIYHVAQPFI----------------------STLPDVKSVLLVGGVE 39
+I+SPTREL++QI+ V + +T+P + LLVGG
Sbjct: 90 AIIVSPTRELAAQIHTVLMKLLQFHEVSAEILPHLKDDDEKRPSTTVPAIVPQLLVGGTT 149
Query: 40 VKA-DVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQI 97
A D++ N+LI +PGRL ++M V + E+LVLDEADRLLD+GF+ +
Sbjct: 150 TTAQDLRFFLRHSPNVLISSPGRLVELMSSPHVHCPQSSFEVLVLDEADRLLDLGFKPDL 209
Query: 98 SYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSK 157
I+S LPK RRTGLFSA+ +EAV E+ + GLRNPV++EV+ + K + L K
Sbjct: 210 QKILSHLPKQRRTGLFSASVSEAVGEIIRVGLRNPVKIEVKVKIKGGGI------LEDRK 263
Query: 158 TPLGLHL 164
TP L +
Sbjct: 264 TPASLQM 270
>gi|154417912|ref|XP_001581975.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
gi|121916207|gb|EAY20989.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
Length = 546
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 87/137 (63%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+ Q+Y VAQ + P + ++GG +V AD++ +LIGTPG+L
Sbjct: 82 LVLVPTRELAQQVYEVAQSISAEFPAMVPQYVIGGSQVTADIETFNNVKPTILIGTPGKL 141
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+++M + FR L + ++DEAD++L G ++ I +LP RRTGLFSAT +A+
Sbjct: 142 HELMTELPDDTFRKLSLFIVDEADQILRNGLGGTLTAIFQKLPTQRRTGLFSATMNDALS 201
Query: 123 ELSKAGLRNPVRVEVRA 139
E+ K G+RNP+ + +++
Sbjct: 202 EIIKTGMRNPMYIHIKS 218
>gi|84997461|ref|XP_953452.1| DEAD-box family ATP-dependent helicase [Theileria annulata strain
Ankara]
gi|65304448|emb|CAI76827.1| DEAD-box family ATP-dependent helicase, putative [Theileria
annulata]
Length = 535
Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 90/136 (66%), Gaps = 2/136 (1%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G+IISPTRELS QI+ V + LP +++ G + + K ++ G N+LI TPGR
Sbjct: 145 GLIISPTRELSLQIFEVGKEICKYLPQTLGLVMGGANRKQEEFKLVK--GVNILIATPGR 202
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D M+ ++NL + V+DEADR+L +GF+++++ II LPK R+T LFSAT T V
Sbjct: 203 LLDHMQNTKGFVYKNLMVFVIDEADRILQIGFEQEMNQIIKLLPKNRQTSLFSATHTSNV 262
Query: 122 EELSKAGLRNPVRVEV 137
++L++ L++P+ ++V
Sbjct: 263 DDLARLSLKSPIFLQV 278
>gi|399218638|emb|CCF75525.1| unnamed protein product [Babesia microti strain RI]
Length = 522
Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTRELS QI++V + LP L++GG K +V ++ + G N+L+ TPGRL
Sbjct: 128 VIISPTRELSLQIFNVGKQLCELLPQTIG-LVIGGANRKMEVDRLNK-GINILVATPGRL 185
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D M+ F+NL +L +DEADR+L++GF++ ++ II LPK R+T LFSAT T V+
Sbjct: 186 LDHMQNTKGFVFKNLLLLTIDEADRILEIGFEEDMNNIIKMLPKKRQTCLFSATNTNKVQ 245
Query: 123 ELSKAGLRNPVRVEV 137
+L++ L PV V++
Sbjct: 246 DLARLSLNKPVSVKI 260
>gi|322709774|gb|EFZ01349.1| DEAD/DEAH box helicase (Sbp4), putative [Metarhizium anisopliae
ARSEF 23]
Length = 627
Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 102/186 (54%), Gaps = 29/186 (15%)
Query: 2 GMIISPTRELSSQIYHVAQPFI---------------------STLPDVKSVLLVGGVEV 40
+I+SPTREL+ QI+ V + +T P + LLVGG
Sbjct: 91 AIIVSPTRELADQIHSVLLSLLAFHPPSAEILPNLNDEEKRPSTTTPVIVPQLLVGGTTT 150
Query: 41 KA-DVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQIS 98
A D+ N+LI +PGRL +++ V + E+LVLDEADRLLD+GF++ +
Sbjct: 151 TAQDLSYFMRHSPNVLISSPGRLVELLSSPHVHCPQSSFEMLVLDEADRLLDLGFKQDLQ 210
Query: 99 YIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKT 158
IIS LPK RRTGLFSA+ +EAV E+ + GLRNPV++EVR + K V L KT
Sbjct: 211 NIISHLPKQRRTGLFSASVSEAVGEIIRVGLRNPVKIEVRVKMKDGGV------LEDRKT 264
Query: 159 PLGLHL 164
P L +
Sbjct: 265 PASLQM 270
>gi|156089263|ref|XP_001612038.1| DEAD/DEAH box domain containing protein [Babesia bovis]
gi|154799292|gb|EDO08470.1| DEAD/DEAH box domain containing protein [Babesia bovis]
Length = 509
Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 91/136 (66%), Gaps = 2/136 (1%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G+IISPTRELS Q + VA+ + LP L++GG + + +++ G N+LI TPGR
Sbjct: 117 GLIISPTRELSEQTFAVAKDVLKYLPQTIG-LVMGGTNRRGEAERLSR-GINILIATPGR 174
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D M+ ++NL +L++DEADR+L++GF+++++ II LPK R+T LFSAT T V
Sbjct: 175 LLDHMQNTKGFLYKNLLVLIIDEADRILEIGFEEEMNQIIKLLPKKRQTCLFSATHTSKV 234
Query: 122 EELSKAGLRNPVRVEV 137
E++ + + NPV V+
Sbjct: 235 EDMVRLSMTNPVFVQA 250
>gi|426198566|gb|EKV48492.1| hypothetical protein AGABI2DRAFT_203365 [Agaricus bisporus var.
bisporus H97]
Length = 664
Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 100/167 (59%), Gaps = 26/167 (15%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKS--------------------VLLVGGVEVK 41
++ISPTREL+SQI+ V F+ + P + +LLV +
Sbjct: 87 ALVISPTRELASQIHSVFSLFLHSQPCQEESNEGSQESQSQQFKLQYPSPLLLVSSSQST 146
Query: 42 A--DVKKIEEEGANLLIGTPGRLYDIMERM--DVLDFRNLEILVLDEADRLLDMGFQKQI 97
D+++ GA+++IGTPGR+ + + R + + + E+LVLDEADRLLD+GFQ +
Sbjct: 147 PAQDIERFLSSGADIVIGTPGRVEEFLLRRGRNTVSVKEFEVLVLDEADRLLDLGFQDIL 206
Query: 98 SYIISRLPKLRRTGLFSATQT--EAVEELSKAGLRNPVRVEVRAESK 142
II+ LPK RRTGLFSAT T +A+ EL +AGLRNP RV V+ ++K
Sbjct: 207 GRIITHLPKQRRTGLFSATMTDADAMTELVRAGLRNPARVIVKVQAK 253
>gi|406603477|emb|CCH45033.1| ATP-dependent rRNA helicase SPB4 [Wickerhamomyces ciferrii]
Length = 591
Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 95/147 (64%), Gaps = 6/147 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPD---VKSVLLVGGVE-VKADVKKIEEEGANLLIG 57
+I+SPTRELS QI V Q + P +++ +LVGG+ + D++ ++ +++
Sbjct: 85 AVIVSPTRELSLQIEKVLQSVLKFNPKEQGIRTQVLVGGINSIDEDLRTFQKTNPQIIVA 144
Query: 58 TPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQ 117
TPGRL + ++ +++ +N E+LVLDEAD+LLD+ F+K+++ I LPK +R GLFSAT
Sbjct: 145 TPGRLSEFLKFSNIVHTKNCEVLVLDEADKLLDLNFEKEMNNIFHSLPKQKRVGLFSATI 204
Query: 118 TEAVEELSKAGLRNPVRVEVRAESKSH 144
A E K G+RNPV++ V SK+H
Sbjct: 205 LNASSEFHKTGMRNPVKIVV--NSKNH 229
>gi|295150956|gb|ADF81646.1| Has1 [Heliconius erato emma]
gi|295150998|gb|ADF81667.1| Has1 [Heliconius erato favorinus x Heliconius erato emma]
gi|295151048|gb|ADF81692.1| Has1 [Heliconius erato favorinus]
Length = 238
Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 108/175 (61%), Gaps = 7/175 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++ISPTREL+ QIY + + L D + L++GG +K + K++++ N+LI TPGR
Sbjct: 42 ALVISPTRELAYQIYETLRK-VGHLHDFSAGLIIGGQNLKFERKRMDQ--INILICTPGR 98
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + D NL+ILVLDEADR LDMGF+ ++ II LP R+T LFSATQT++V
Sbjct: 99 LLQHMDENPLFDCSNLQILVLDEADRCLDMGFEATMNAIIENLPPKRQTLLFSATQTKSV 158
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
++L++ L P V ++++ V+ S Q + + + ++W+ ++NH
Sbjct: 159 KDLARLSLSFPTYVAPHEQAET--VTPESLQQSYIXCEIDEKVGILWSF--IKNH 209
>gi|253575100|ref|ZP_04852439.1| ATP-dependent RNA helicase DeaD [Paenibacillus sp. oral taxon 786
str. D14]
gi|251845556|gb|EES73565.1| ATP-dependent RNA helicase DeaD [Paenibacillus sp. oral taxon 786
str. D14]
Length = 410
Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 94/136 (69%), Gaps = 3/136 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++I+PTREL+ QIY + LP +K ++ GGV K +++ G ++L+ TPGR
Sbjct: 78 ALVITPTRELALQIYENFCAYGKYLP-LKCAVIFGGVSQKPQEAALQK-GVDILVATPGR 135
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D+M++ ++D +N+E+L+LDEADR+LDMGF + II++ P R+T LFSAT +A+
Sbjct: 136 LNDLMQQ-KLIDLKNVELLILDEADRMLDMGFIHDVKKIIAKTPSQRQTLLFSATMPDAI 194
Query: 122 EELSKAGLRNPVRVEV 137
+++ + LRNPV+VE+
Sbjct: 195 AQMADSILRNPVKVEI 210
>gi|430811243|emb|CCJ31259.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 5307
Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 92/142 (64%), Gaps = 3/142 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++ISPTREL++QI+ V I + + L +GG +++ + ++I N++I TPGR
Sbjct: 112 ALVISPTRELATQIFQVLCK-IGKKHNFSAGLAIGGKDLQEEAQRISR--MNIMICTPGR 168
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ M++ D NL+ILVLDEAD +LDMGFQK I II +PK R+T LFSATQT+ V
Sbjct: 169 ILQHMDQTSGFDVSNLQILVLDEADCILDMGFQKTIDAIIENIPKNRQTLLFSATQTKRV 228
Query: 122 EELSKAGLRNPVRVEVRAESKS 143
++LS+ LRNP + V + S
Sbjct: 229 KDLSRLSLRNPDYIAVHEKEAS 250
>gi|358391930|gb|EHK41334.1| hypothetical protein TRIATDRAFT_78010 [Trichoderma atroviride IMI
206040]
Length = 627
Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 96/163 (58%), Gaps = 22/163 (13%)
Query: 2 GMIISPTRELSSQI---------YHVAQPFI------------STLPDVKSVLLVGGVEV 40
++ISPTREL++QI +H I S +P + LLVGG
Sbjct: 91 AIVISPTRELAAQIHTVLLSLLEFHAPSAEILPHLKGEDKRPSSAVPAIVPQLLVGGTTT 150
Query: 41 KA-DVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISY 99
A D+ NLLI +PGRL +++ V ++ E LVLDEADRLLD+GF++ +
Sbjct: 151 PAQDLSYFVRHSPNLLISSPGRLVELLASPHVHIDQSFEALVLDEADRLLDLGFKQDLQT 210
Query: 100 IISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESK 142
I+S LPK RRTGLFSA+ +EAV E+ + GLRNPV++EV+ + K
Sbjct: 211 ILSHLPKQRRTGLFSASVSEAVGEIIRVGLRNPVKIEVKVKMK 253
>gi|388854389|emb|CCF51973.1| related to SPB4-ATP-dependent RNA helicase of DEAH box family
[Ustilago hordei]
Length = 806
Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 81/115 (70%), Gaps = 3/115 (2%)
Query: 33 LLVGGVEVKA--DVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLD 90
L+VGG + D + + G ++L+GTPGRL +++ R V L++LVLDEADRLLD
Sbjct: 186 LIVGGSKSTPLDDYRTFRDSGPDILVGTPGRLEELLTRKGVKK-SELDLLVLDEADRLLD 244
Query: 91 MGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHH 145
+GF + + I+S LPK RRTGLFSAT TEA+ EL + GLRNPVRV V+ E+KS H
Sbjct: 245 LGFTENLRRILSLLPKQRRTGLFSATMTEALSELVRMGLRNPVRVVVKVEAKSKH 299
>gi|303288912|ref|XP_003063744.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454812|gb|EEH52117.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 577
Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 91/135 (67%), Gaps = 2/135 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
MI++PTREL+ QIY+V Q ++ L++GG +A+ +K+ + G NLL+ TPGRL
Sbjct: 149 MILTPTRELALQIYNVTQQLMTKHSQTHG-LIIGGANRRAEAEKLVK-GVNLLVATPGRL 206
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D M+ F +L+I +DEADR+LD+GF++++ I+ +PK R+T LFSATQT VE
Sbjct: 207 LDHMQNTKGFTFSSLKIFCMDEADRMLDIGFEEEMRTIVKMIPKDRQTMLFSATQTTKVE 266
Query: 123 ELSKAGLRNPVRVEV 137
+L++ L++P + V
Sbjct: 267 DLARLSLKSPTYIGV 281
>gi|85708956|ref|ZP_01040022.1| DNA and RNA helicase [Erythrobacter sp. NAP1]
gi|85690490|gb|EAQ30493.1| DNA and RNA helicase [Erythrobacter sp. NAP1]
Length = 497
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 97/147 (65%), Gaps = 4/147 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+ PTREL++Q+ + + + D+K LL+GGV++ +K ++E G ++LI TPGRL
Sbjct: 111 LILEPTRELAAQVAENFEKYGANH-DLKMALLIGGVQMGDQLKTLDE-GVDVLIATPGRL 168
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ ER +L E+LV+DEADR+LDMGF I +I +LP+ R+T LFSAT +E
Sbjct: 169 MDLFERGKIL-LNGCELLVIDEADRMLDMGFIPDIEFICDKLPETRQTMLFSATMPAPIE 227
Query: 123 ELSKAGLRNPVRVE-VRAESKSHHVSA 148
+L+K L NP R+E RA + + ++A
Sbjct: 228 KLAKKFLSNPKRIETTRAATTNKDITA 254
>gi|85374360|ref|YP_458422.1| DNA and RNA helicase [Erythrobacter litoralis HTCC2594]
gi|84787443|gb|ABC63625.1| DNA and RNA helicase [Erythrobacter litoralis HTCC2594]
Length = 455
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 96/147 (65%), Gaps = 4/147 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+ PTREL++Q+ + + D+K LL+GGV++ +K + E G ++LI TPGRL
Sbjct: 76 LILEPTRELAAQVAENFEKYGENH-DLKMALLIGGVQMGDQIKALNE-GVDVLIATPGRL 133
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ ER +L E+LV+DEADR+LDMGF I +I S+LP+ R+T LFSAT +E
Sbjct: 134 MDLFERGKIL-LNGCELLVIDEADRMLDMGFIPDIEFICSKLPEQRQTMLFSATMPPPIE 192
Query: 123 ELSKAGLRNPVRVE-VRAESKSHHVSA 148
+LSK + NP R+E RA + + ++A
Sbjct: 193 KLSKQFMSNPKRIETTRAATTNKDITA 219
>gi|393247983|gb|EJD55490.1| DEAD-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 552
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 105/151 (69%), Gaps = 4/151 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++ISPTREL+ QI+ VA+ ++ +L+ GG KA+ +K+E+ G NL+I TPGRL
Sbjct: 98 IVISPTRELALQIFGVAKELMAHHTQTYGILM-GGANKKAEAEKLEK-GVNLVIATPGRL 155
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP-KLRRTGLFSATQTEAV 121
D ++ FRNL+ LV+DEADR+L++GF++Q+ II+ LP + R++ LFSATQT V
Sbjct: 156 MDHLQDTKGFVFRNLKALVIDEADRILEVGFEEQMKKIIAILPNEGRQSMLFSATQTTKV 215
Query: 122 EELSKAGLR-NPVRVEVRAESKSHHVSASSQ 151
++L++ LR P+ ++V AE+++ V+ SQ
Sbjct: 216 QDLARISLRPGPLLIDVDAEAQTSTVTTLSQ 246
>gi|71279965|ref|YP_269372.1| DEAD-box ATP dependent DNA helicase [Colwellia psychrerythraea 34H]
gi|71145705|gb|AAZ26178.1| ATP-dependent RNA helicase, DEAD box family [Colwellia
psychrerythraea 34H]
Length = 399
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 114/181 (62%), Gaps = 11/181 (6%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL+SQI + L +K+ ++ GGV +A V IE G ++L+ TPGRL
Sbjct: 79 LILTPTRELASQIMQNIDDYSDGL-GLKTKVVYGGVGRQAQVDSIEL-GLDILVATPGRL 136
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D++E D+ +F+ LE+ VLDEAD +LDMGF K + IIS+LPK R+T LFSAT +E
Sbjct: 137 LDLIETGDI-NFKALEVFVLDEADTMLDMGFFKDVQSIISKLPKSRQTLLFSATMPAEIE 195
Query: 123 ELSKAGLRNPVRVEVRAESKS-HHVSASSQQL-ASSKTPLGLHLEVIWNVNQMRNHHNLL 180
L++A L +P ++++ AE+ + V+ S L S+K PL ++N+ ++ +L
Sbjct: 196 ILAEAILTDPTKIQITAETVTIDLVNQSVYHLDKSNKVPL------LFNILTKADYEKVL 249
Query: 181 I 181
I
Sbjct: 250 I 250
>gi|295151046|gb|ADF81691.1| Has1 [Heliconius erato favorinus]
Length = 238
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 108/175 (61%), Gaps = 7/175 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++ISPTREL+ QIY + + L D + L++GG +K + K++++ N+LI TPGR
Sbjct: 42 ALVISPTRELAYQIYETLRK-VGHLHDFSAGLIIGGQNLKFERKRMDQ--INILICTPGR 98
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + D NL+ILVLDEADR LDMGF+ ++ II LP R+T LFSATQT++V
Sbjct: 99 LLQHMDENPLFDCSNLQILVLDEADRCLDMGFEATMNAIIENLPPKRQTLLFSATQTKSV 158
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
++L++ L P V ++++ V+ S Q + + + ++W+ ++NH
Sbjct: 159 KDLARLSLSFPTYVAPHEQAET--VTPESLQQSXIVCEIDEKVGILWSF--IKNH 209
>gi|242020238|ref|XP_002430562.1| ATP-dependent RNA helicase DBP4, putative [Pediculus humanus
corporis]
gi|212515734|gb|EEB17824.1| ATP-dependent RNA helicase DBP4, putative [Pediculus humanus
corporis]
Length = 606
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 113/184 (61%), Gaps = 9/184 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI+ + I D + L++GG ++ + ++++ N++I TPGR
Sbjct: 126 ALIITPTRELAYQIFETLKK-IGKHHDFSAGLIIGGKDLHFEKGRMDQ--CNIIICTPGR 182
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ M+ + D +++ILVLDEADR LD+GFQ+ ++ II LP R+T LFSATQT++V
Sbjct: 183 ILHHMDENPLFDCNSMQILVLDEADRCLDLGFQETMNNIIENLPPKRQTLLFSATQTKSV 242
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLH--LEVIWNVNQMRNHHNL 179
++L++ L+NP V V E KSH ++ + L S LH +++IW+ + +
Sbjct: 243 KDLARLSLKNPKYVAVH-EHKSH---STPESLEQSYVVCELHDKIKMIWSFIKNHKRQKI 298
Query: 180 LICL 183
LI L
Sbjct: 299 LIFL 302
>gi|342882213|gb|EGU82941.1| hypothetical protein FOXB_06494 [Fusarium oxysporum Fo5176]
Length = 664
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 104/186 (55%), Gaps = 29/186 (15%)
Query: 2 GMIISPTRELSSQI---------YHVAQPFI------------STLPDVKSVLLVGGVEV 40
+I+SPTREL++QI +H A I +T+P + LLVGG
Sbjct: 119 AIIVSPTRELAAQIHTVLVNLLQFHEASAEILPHLKGDEKRPSTTVPAIVPQLLVGGTTT 178
Query: 41 KA-DVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQIS 98
A D+ N+LI +PGRL +++ V + E+LVLDEADRLLD+GF+ +
Sbjct: 179 TAQDLSFFLRHSPNVLISSPGRLVELLSSPHVHCPQSSFEVLVLDEADRLLDLGFKPDLQ 238
Query: 99 YIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKT 158
I+S LPK RRTGLFSA+ +EAV E+ + GLRNPV++EV+ + K + L KT
Sbjct: 239 KILSHLPKQRRTGLFSASVSEAVGEIIRVGLRNPVKIEVKVKMKDGGI------LEDRKT 292
Query: 159 PLGLHL 164
P L +
Sbjct: 293 PASLQM 298
>gi|255087406|ref|XP_002505626.1| predicted protein [Micromonas sp. RCC299]
gi|226520896|gb|ACO66884.1| predicted protein [Micromonas sp. RCC299]
Length = 620
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 91/135 (67%), Gaps = 2/135 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
M++SPTREL+ QIY+VAQ + L++GG +A+ +K+ + G NLL+ TPGRL
Sbjct: 195 MVLSPTRELALQIYNVAQQLMKKHSQTHG-LIIGGANRRAEAEKLVK-GVNLLVATPGRL 252
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D M+ F +L++ +DEADR+LD+GF++++ I+ +PK R+T LFSATQT VE
Sbjct: 253 LDHMQNTKGFAFGSLKVFCMDEADRMLDIGFEEEMRTIVRMIPKDRQTMLFSATQTTKVE 312
Query: 123 ELSKAGLRNPVRVEV 137
+L++ L++P + V
Sbjct: 313 DLARLSLKSPTYIGV 327
>gi|449547387|gb|EMD38355.1| hypothetical protein CERSUDRAFT_104945 [Ceriporiopsis subvermispora
B]
Length = 683
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 106/181 (58%), Gaps = 30/181 (16%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKS-------------------------VLLVG 36
++++PTREL++QI+ + F+S+ P S +L V
Sbjct: 87 ALVVTPTRELATQIHSIFSLFLSSQPAKPSSCKTFDDDLANKTSTNVSASAYPPPLLAVS 146
Query: 37 GVEVKA-DVKKIEEEGANLLIGTPGRLYDIM--ERMDVLDFRNLEILVLDEADRLLDMGF 93
A D++ GA+++IGTPGR+ + + + DV++ + LEILVLDEADRLLD+GF
Sbjct: 147 SESSPAQDLQNFLSTGADIVIGTPGRVEEFLLGKGRDVVNAKELEILVLDEADRLLDLGF 206
Query: 94 QKQISYIISRLPKLRRTGLFSATQT--EAVEELSKAGLRNPVRVEVRAESKSHHVSASSQ 151
Q ++ I++ LPK RRTGLFSAT T +A+ EL + GLRNP R+ V+ ++K + A +
Sbjct: 207 QNTLTRILAHLPKQRRTGLFSATMTDADALSELVRVGLRNPARIVVKVQTKKSNGKAPLK 266
Query: 152 Q 152
Q
Sbjct: 267 Q 267
>gi|295150968|gb|ADF81652.1| Has1 [Heliconius erato emma]
gi|295151040|gb|ADF81688.1| Has1 [Heliconius erato favorinus]
gi|295151044|gb|ADF81690.1| Has1 [Heliconius erato favorinus]
gi|295151062|gb|ADF81699.1| Has1 [Heliconius erato favorinus]
Length = 238
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 108/175 (61%), Gaps = 7/175 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++ISPTREL+ QIY + + L D + L++GG +K + K++++ N+LI TPGR
Sbjct: 42 ALVISPTRELAYQIYETLRK-VGHLHDFSAGLIIGGQNLKFERKRMDQ--INILICTPGR 98
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + D NL+ILVLDEADR LDMGF+ ++ II LP R+T LFSATQT++V
Sbjct: 99 LLQHMDENPLFDCSNLQILVLDEADRCLDMGFEATMNAIIENLPPKRQTLLFSATQTKSV 158
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
++L++ L P V ++++ V+ S Q + + + ++W+ ++NH
Sbjct: 159 KDLARLSLSFPTYVAPHEQAET--VTPESLQQSXIVCEIDEKVGILWSF--IKNH 209
>gi|400594920|gb|EJP62747.1| DEAD/DEAH box helicase [Beauveria bassiana ARSEF 2860]
Length = 640
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 103/187 (55%), Gaps = 30/187 (16%)
Query: 2 GMIISPTRELSSQI---------YHVAQ----PFI---------STLPDVKSVLLVGGVE 39
+I+SPTREL++QI +HV PF+ + P V LLVGG
Sbjct: 91 AIIVSPTRELAAQIHTVLLSLLEFHVPSAEILPFLAQDDEKRPATAAPVVVPQLLVGGTT 150
Query: 40 VKA-DVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQI 97
A D+ NLLI +PGRL +++ V E LVLDEADRLLD+GF++ +
Sbjct: 151 TTAQDLAYFMRHSPNLLIASPGRLVELLSSPHVHCPQSTFESLVLDEADRLLDLGFKQDL 210
Query: 98 SYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSK 157
I+S LPK RRTGLFSA+ +EAV E+ + GLRNPV++EV+ + K + L +
Sbjct: 211 QDILSHLPKQRRTGLFSASVSEAVSEIIRVGLRNPVKIEVKVKMKDGGI------LEDRR 264
Query: 158 TPLGLHL 164
TP L +
Sbjct: 265 TPASLQM 271
>gi|295151066|gb|ADF81701.1| Has1 [Heliconius erato emma]
Length = 238
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 108/175 (61%), Gaps = 7/175 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++ISPTREL+ QIY + + L D + L++GG +K + K++++ N+LI TPGR
Sbjct: 42 ALVISPTRELAYQIYETLRK-VGHLHDFSAGLIIGGQNLKFERKRMDQ--INILICTPGR 98
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + D NL+ILVLDEADR LDMGF+ ++ II LP R+T LFSATQT++V
Sbjct: 99 LLQHMDENPLFDCSNLQILVLDEADRCLDMGFEAXMNAIIENLPPKRQTLLFSATQTKSV 158
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
++L++ L P V ++++ V+ S Q + + + ++W+ ++NH
Sbjct: 159 KDLARLSLSFPTYVAPHEQAET--VTPESLQQSYIVCEIDEKVGILWSF--IKNH 209
>gi|169773163|ref|XP_001821050.1| ATP-dependent RNA helicase dbp4 [Aspergillus oryzae RIB40]
gi|238491114|ref|XP_002376794.1| DEAD box RNA helicase (Hca4), putative [Aspergillus flavus
NRRL3357]
gi|91206545|sp|Q2UHB7.1|DBP4_ASPOR RecName: Full=ATP-dependent RNA helicase dbp4
gi|83768911|dbj|BAE59048.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220697207|gb|EED53548.1| DEAD box RNA helicase (Hca4), putative [Aspergillus flavus
NRRL3357]
Length = 796
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+SPTREL+ QI+ V + I + L++GG +K + +++ N+L+ TPGR
Sbjct: 120 ALILSPTRELAIQIFEVLRK-IGRYHTFSAGLIIGGKSLKEEQERLGR--MNILVCTPGR 176
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ +++ + D NL++LVLDEADR+LDMGFQK + I+ LPK R+T LFSATQT+ V
Sbjct: 177 MLQHLDQTAMFDVFNLQMLVLDEADRILDMGFQKTVDAIVGHLPKERQTLLFSATQTKKV 236
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNV 170
+L++ L++P V V + S S Q TPL L+V+W+
Sbjct: 237 SDLARLSLQDPEYVAVHETASSATPSTLQQHYVV--TPLSQKLDVLWSF 283
>gi|295150948|gb|ADF81642.1| Has1 [Heliconius erato favorinus x Heliconius erato emma]
gi|295151024|gb|ADF81680.1| Has1 [Heliconius erato favorinus x Heliconius erato emma]
Length = 238
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 108/175 (61%), Gaps = 7/175 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++ISPTREL+ QIY + + L D + L++GG +K + K++++ N+LI TPGR
Sbjct: 42 ALVISPTRELAYQIYETLRK-VGHLHDFSAGLIIGGQNLKFERKRMDQ--INILICTPGR 98
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + D NL+ILVLDEADR LDMGF+ ++ II LP R+T LFSATQT++V
Sbjct: 99 LLQHMDENPLFDCSNLQILVLDEADRCLDMGFEATMNAIIENLPPKRQTLLFSATQTKSV 158
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
++L++ L P V ++++ V+ S Q + + + ++W+ ++NH
Sbjct: 159 KDLARLSLSFPTYVAPHEQAET--VTPESLQQSYIVCEIDEKVGILWSF--IKNH 209
>gi|295151002|gb|ADF81669.1| Has1 [Heliconius erato favorinus x Heliconius erato emma]
gi|295151036|gb|ADF81686.1| Has1 [Heliconius erato favorinus]
gi|295151070|gb|ADF81703.1| Has1 [Heliconius erato favorinus]
Length = 238
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 108/175 (61%), Gaps = 7/175 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++ISPTREL+ QIY + + L D + L++GG +K + K++++ N+LI TPGR
Sbjct: 42 ALVISPTRELAYQIYETLRK-VGHLHDFSAGLIIGGQNLKFERKRMDQ--INILICTPGR 98
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + D NL+ILVLDEADR LDMGF+ ++ II LP R+T LFSATQT++V
Sbjct: 99 LLQHMDENPLFDCSNLQILVLDEADRCLDMGFEATMNAIIENLPPKRQTLLFSATQTKSV 158
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
++L++ L P V ++++ V+ S Q + + + ++W+ ++NH
Sbjct: 159 KDLARLSLSFPTYVAPHEQAET--VTPESLQQSYIVCEIDEKVGILWSF--IKNH 209
>gi|391865882|gb|EIT75161.1| RNA Helicase [Aspergillus oryzae 3.042]
Length = 796
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+SPTREL+ QI+ V + I + L++GG +K + +++ N+L+ TPGR
Sbjct: 120 ALILSPTRELAIQIFEVLRK-IGRYHTFSAGLIIGGKSLKEEQERLGR--MNILVCTPGR 176
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ +++ + D NL++LVLDEADR+LDMGFQK + I+ LPK R+T LFSATQT+ V
Sbjct: 177 MLQHLDQTAMFDVFNLQMLVLDEADRILDMGFQKTVDAIVGHLPKERQTLLFSATQTKKV 236
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNV 170
+L++ L++P V V + S S Q TPL L+V+W+
Sbjct: 237 SDLARLSLQDPEYVAVHETASSATPSTLQQHYVV--TPLSQKLDVLWSF 283
>gi|396082262|gb|AFN83872.1| DEAD box ATP-dependent RNA helicase [Encephalitozoon romaleae
SJ-2008]
Length = 460
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/137 (43%), Positives = 96/137 (70%), Gaps = 7/137 (5%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+ MII+PTREL+ QI VA+ F DV+ +GG+ ++ D ++++ E ++++GTPG
Sbjct: 78 VAMIITPTRELAMQIKEVAELF-----DVRCECFIGGMNIEKDYERMKGE-FSIVVGTPG 131
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL +I+ + D+ F + +VLDEAD+LL GF++++ +I +LPK R TGLFSAT ++
Sbjct: 132 RLLEIVSK-DIKKFSRIRHVVLDEADKLLGFGFEEKLMQLIKKLPKNRVTGLFSATINDS 190
Query: 121 VEELSKAGLRNPVRVEV 137
V++LS+A LRNPV + V
Sbjct: 191 VDKLSRASLRNPVSINV 207
>gi|295150932|gb|ADF81634.1| Has1 [Heliconius erato favorinus x Heliconius erato emma]
gi|295150936|gb|ADF81636.1| Has1 [Heliconius erato favorinus x Heliconius erato emma]
gi|295150938|gb|ADF81637.1| Has1 [Heliconius erato emma]
gi|295150940|gb|ADF81638.1| Has1 [Heliconius erato favorinus]
gi|295150942|gb|ADF81639.1| Has1 [Heliconius erato favorinus]
gi|295150944|gb|ADF81640.1| Has1 [Heliconius erato favorinus]
gi|295150946|gb|ADF81641.1| Has1 [Heliconius erato favorinus]
gi|295150950|gb|ADF81643.1| Has1 [Heliconius erato favorinus x Heliconius erato emma]
gi|295150952|gb|ADF81644.1| Has1 [Heliconius erato favorinus x Heliconius erato emma]
gi|295150954|gb|ADF81645.1| Has1 [Heliconius erato favorinus x Heliconius erato emma]
gi|295150958|gb|ADF81647.1| Has1 [Heliconius erato favorinus x Heliconius erato emma]
gi|295150960|gb|ADF81648.1| Has1 [Heliconius erato favorinus x Heliconius erato emma]
gi|295150962|gb|ADF81649.1| Has1 [Heliconius erato favorinus x Heliconius erato emma]
gi|295150964|gb|ADF81650.1| Has1 [Heliconius erato favorinus x Heliconius erato emma]
gi|295150966|gb|ADF81651.1| Has1 [Heliconius erato favorinus x Heliconius erato emma]
gi|295150970|gb|ADF81653.1| Has1 [Heliconius erato favorinus x Heliconius erato emma]
gi|295150974|gb|ADF81655.1| Has1 [Heliconius erato favorinus x Heliconius erato emma]
gi|295150978|gb|ADF81657.1| Has1 [Heliconius erato favorinus x Heliconius erato emma]
gi|295150980|gb|ADF81658.1| Has1 [Heliconius erato emma]
gi|295150982|gb|ADF81659.1| Has1 [Heliconius erato emma]
gi|295150984|gb|ADF81660.1| Has1 [Heliconius erato emma]
gi|295150986|gb|ADF81661.1| Has1 [Heliconius erato favorinus x Heliconius erato emma]
gi|295150988|gb|ADF81662.1| Has1 [Heliconius erato favorinus x Heliconius erato emma]
gi|295150990|gb|ADF81663.1| Has1 [Heliconius erato emma]
gi|295150994|gb|ADF81665.1| Has1 [Heliconius erato favorinus x Heliconius erato emma]
gi|295150996|gb|ADF81666.1| Has1 [Heliconius erato favorinus x Heliconius erato emma]
gi|295151000|gb|ADF81668.1| Has1 [Heliconius erato favorinus x Heliconius erato emma]
gi|295151004|gb|ADF81670.1| Has1 [Heliconius erato emma]
gi|295151006|gb|ADF81671.1| Has1 [Heliconius erato favorinus x Heliconius erato emma]
gi|295151010|gb|ADF81673.1| Has1 [Heliconius erato favorinus]
gi|295151012|gb|ADF81674.1| Has1 [Heliconius erato favorinus x Heliconius erato emma]
gi|295151014|gb|ADF81675.1| Has1 [Heliconius erato favorinus x Heliconius erato emma]
gi|295151016|gb|ADF81676.1| Has1 [Heliconius erato favorinus x Heliconius erato emma]
gi|295151018|gb|ADF81677.1| Has1 [Heliconius erato favorinus x Heliconius erato emma]
gi|295151020|gb|ADF81678.1| Has1 [Heliconius erato favorinus x Heliconius erato emma]
gi|295151022|gb|ADF81679.1| Has1 [Heliconius erato favorinus]
gi|295151026|gb|ADF81681.1| Has1 [Heliconius erato favorinus x Heliconius erato emma]
gi|295151030|gb|ADF81683.1| Has1 [Heliconius erato favorinus x Heliconius erato emma]
gi|295151032|gb|ADF81684.1| Has1 [Heliconius erato favorinus]
gi|295151034|gb|ADF81685.1| Has1 [Heliconius erato favorinus]
gi|295151038|gb|ADF81687.1| Has1 [Heliconius erato favorinus]
gi|295151042|gb|ADF81689.1| Has1 [Heliconius erato favorinus]
gi|295151050|gb|ADF81693.1| Has1 [Heliconius erato favorinus]
gi|295151052|gb|ADF81694.1| Has1 [Heliconius erato favorinus]
gi|295151058|gb|ADF81697.1| Has1 [Heliconius erato favorinus x Heliconius erato emma]
gi|295151060|gb|ADF81698.1| Has1 [Heliconius erato emma]
gi|295151064|gb|ADF81700.1| Has1 [Heliconius erato emma]
gi|295151068|gb|ADF81702.1| Has1 [Heliconius erato favorinus]
Length = 238
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 108/175 (61%), Gaps = 7/175 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++ISPTREL+ QIY + + L D + L++GG +K + K++++ N+LI TPGR
Sbjct: 42 ALVISPTRELAYQIYETLRK-VGHLHDFSAGLIIGGQNLKFERKRMDQ--INILICTPGR 98
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + D NL+ILVLDEADR LDMGF+ ++ II LP R+T LFSATQT++V
Sbjct: 99 LLQHMDENPLFDCSNLQILVLDEADRCLDMGFEATMNAIIENLPPKRQTLLFSATQTKSV 158
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
++L++ L P V ++++ V+ S Q + + + ++W+ ++NH
Sbjct: 159 KDLARLSLSFPTYVAPHEQAET--VTPESLQQSYIVCEIDEKVGILWSF--IKNH 209
>gi|354547499|emb|CCE44233.1| hypothetical protein CPAR2_400340 [Candida parapsilosis]
Length = 758
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 101/168 (60%), Gaps = 4/168 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+SPTREL+ QI+ V I + L+ GG +V+ + ++I N+L+GTPGR
Sbjct: 124 ALIVSPTRELAVQIFEVLAK-IGKYNSFSAGLVTGGKDVQYEKERISR--MNILVGTPGR 180
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ + ++ NL++LVLDEADR LDMGF+KQI I+ LP R+T LFSAT T++V
Sbjct: 181 ISQHLNEAVGMETSNLQVLVLDEADRCLDMGFKKQIDNIVKHLPPTRQTLLFSATTTDSV 240
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWN 169
++L++ L NP R+ ++ + S Q + PL L+V+W+
Sbjct: 241 QDLARLSLTNPKRIGTSSDKDVSTIPESLDQYY-VRVPLDEKLDVLWS 287
>gi|295151008|gb|ADF81672.1| Has1 [Heliconius erato favorinus x Heliconius erato emma]
Length = 238
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 108/175 (61%), Gaps = 7/175 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++ISPTREL+ QIY + + L D + L++GG +K + K++++ N+LI TPGR
Sbjct: 42 ALVISPTRELAYQIYETLRK-VGHLHDFSAGLIIGGQNLKFERKRMDQ--INILICTPGR 98
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + D NL+ILVLDEADR LDMGF+ ++ II LP R+T LFSATQT++V
Sbjct: 99 LLQHMDENPLFDCSNLQILVLDEADRCLDMGFEATMNAIIENLPPKRQTLLFSATQTKSV 158
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
++L++ L P V ++++ V+ S Q + + + ++W+ ++NH
Sbjct: 159 KDLARLSLSFPTYVAPHEQAET--VTPESLQQSYIVCEIDEKVGILWSF--IKNH 209
>gi|295150972|gb|ADF81654.1| Has1 [Heliconius erato favorinus x Heliconius erato emma]
Length = 238
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 108/175 (61%), Gaps = 7/175 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++ISPTREL+ QIY + + L D + L++GG +K + K++++ N+LI TPGR
Sbjct: 42 ALVISPTRELAYQIYETLRK-VGHLHDFSAGLIIGGQNLKFERKRMDQ--INILICTPGR 98
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + D NL+ILVLDEADR LDMGF+ ++ II LP R+T LFSATQT++V
Sbjct: 99 LLQHMDENPLFDCSNLQILVLDEADRCLDMGFEAXMNAIIENLPPKRQTLLFSATQTKSV 158
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
++L++ L P V ++++ V+ S Q + + + ++W+ ++NH
Sbjct: 159 KDLARLSLSFPTYVAPHEQAET--VTPESLQQSYIVCEIDEKVGILWSF--IKNH 209
>gi|365760936|gb|EHN02618.1| Spb4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 505
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 92/158 (58%), Gaps = 11/158 (6%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPD----VKSVLLVGGVE--VKADVKKIEEEGANLL 55
+II+PTRELS QI V F+ P VK LLVG E V+ DV E +L
Sbjct: 86 SLIIAPTRELSRQIETVVLSFLEHYPSDLFPVKCQLLVGTNEGSVRDDVSIFLENRPQIL 145
Query: 56 IGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
+GTPGR+ D ++ M + +++LDEADRLLDM F K I I+ LPK RRTGLFSA
Sbjct: 146 VGTPGRVLDFLQ-MPAVKTSACSMVILDEADRLLDMSFIKDIERILRLLPKQRRTGLFSA 204
Query: 116 TQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQL 153
T A ++ K GLRNPVR+ V S H + SS +L
Sbjct: 205 TMRSAGSDIFKTGLRNPVRITV----NSKHQAPSSLKL 238
>gi|321473575|gb|EFX84542.1| hypothetical protein DAPPUDRAFT_223010 [Daphnia pulex]
Length = 869
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 112/175 (64%), Gaps = 7/175 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI+ + + D + L++GG ++ + K++++ N++I TPGR
Sbjct: 142 ALIITPTRELAYQIFETFRK-VGIQHDFSAGLIIGGKDLNFERKRLDQ--CNIMICTPGR 198
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ M+ + D NL+ILV+DEADR LD+GFQ+ ++ II LP R+T LFSATQT++V
Sbjct: 199 VLHHMDENPLFDCSNLQILVIDEADRCLDLGFQQTMNGIIENLPPKRQTLLFSATQTKSV 258
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
++L++ L++PV V V + + + S + + TP+ ++++W+ +R+H
Sbjct: 259 KDLARLSLKDPVYVSV--HENAQYSTPESLRQSYIITPIQNKVDILWSF--LRSH 309
>gi|295150976|gb|ADF81656.1| Has1 [Heliconius erato favorinus x Heliconius erato emma]
Length = 238
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 107/175 (61%), Gaps = 7/175 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++ISPTREL+ QIY + + L D + L++GG +K + K++++ N+LI TPGR
Sbjct: 42 ALVISPTRELAYQIYETLRK-VGHLHDFSAGLIIGGQNLKFERKRMDQ--INILICTPGR 98
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + D NL+ILVLDEADR LDMGF+ + II LP R+T LFSATQT++V
Sbjct: 99 LLQHMDENPLFDCSNLQILVLDEADRXLDMGFEXTMXAIIENLPPKRQTXLFSATQTKSV 158
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
++L++ L P V ++++ V+ S Q + + + ++W+ ++NH
Sbjct: 159 KDLARLSLSFPTYVAPHEQAET--VTPESLQQSYIVCEIDEKVGILWSF--IKNH 209
>gi|260949783|ref|XP_002619188.1| hypothetical protein CLUG_00347 [Clavispora lusitaniae ATCC 42720]
gi|238846760|gb|EEQ36224.1| hypothetical protein CLUG_00347 [Clavispora lusitaniae ATCC 42720]
Length = 764
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 108/170 (63%), Gaps = 8/170 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ V I + L+ GG +V+ + +++ N+L+GTPGR
Sbjct: 119 ALIISPTRELAVQIFEVLTK-IGKHNSFSAGLVTGGKDVQYEKERVAR--MNILVGTPGR 175
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ + +D NL++LVLDEADR LDMGF+KQI I+S L R+T LFSATQ++++
Sbjct: 176 VSQHLNETFGMDTSNLQVLVLDEADRCLDMGFKKQIDSIVSHLSPERQTLLFSATQSDSI 235
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASS--KTPLGLHLEVIWN 169
++L++ L NP++V V +++ +SA+ + L + PL L+V+W+
Sbjct: 236 KDLARLSLTNPIKVGVSSDA---TLSATPETLDQYYVRIPLEEKLDVLWS 282
>gi|350424364|ref|XP_003493771.1| PREDICTED: probable ATP-dependent RNA helicase DDX10-like [Bombus
impatiens]
Length = 784
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 109/177 (61%), Gaps = 11/177 (6%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++I+PTREL+ QIY + + D+ + L++GG ++K + +++++ N++I TPGR
Sbjct: 114 ALVITPTRELAYQIYETLRK-VGRHHDISAGLIIGGKDLKFEKRRMDQ--CNIVICTPGR 170
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + D N+++LVLDEADR LDMGF++ ++ II LP R+T LFSATQT++V
Sbjct: 171 LLQHMDENPLFDCINMQVLVLDEADRCLDMGFEQTMNSIIENLPPKRQTLLFSATQTKSV 230
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEV--IWNVNQMRNH 176
+L++ L++P+ V V H + + L S L +V +W+ +RNH
Sbjct: 231 RDLARLSLKDPMYVSVH----EHATHTTPEALEQSYVVCALEDKVSMLWSF--IRNH 281
>gi|401840676|gb|EJT43401.1| SPB4-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 606
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 92/158 (58%), Gaps = 11/158 (6%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPD----VKSVLLVGGVE--VKADVKKIEEEGANLL 55
+II+PTRELS QI V F+ P VK LLVG E V+ DV E +L
Sbjct: 86 SLIIAPTRELSRQIETVVLSFLEHYPSDLFPVKCQLLVGTNEGSVRDDVSIFLENRPQIL 145
Query: 56 IGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
+GTPGR+ D ++ M + +++LDEADRLLDM F K I I+ LPK RRTGLFSA
Sbjct: 146 VGTPGRVLDFLQ-MPAVKTSACSMVILDEADRLLDMSFIKDIERILRLLPKQRRTGLFSA 204
Query: 116 TQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQL 153
T A ++ K GLRNPVR+ V S H + SS +L
Sbjct: 205 TMRSAGSDIFKTGLRNPVRITV----NSKHQAPSSLKL 238
>gi|390604200|gb|EIN13591.1| DEAD-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 576
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 104/151 (68%), Gaps = 4/151 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+SPTREL+ QI+ VA+ ++ P +++ GG KA+V K+++ G NLL+ TPGRL
Sbjct: 101 IIVSPTRELALQIFGVAKELMAHHPQTFGIVM-GGANRKAEVDKLQK-GVNLLVATPGRL 158
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP-KLRRTGLFSATQTEAV 121
+D +E FRNL+ LV+DEADR+L++GF++++ II+ +P + R++ LFSATQT V
Sbjct: 159 WDHLENTKGFVFRNLKCLVIDEADRILEVGFEEEMKKIINMIPNENRQSMLFSATQTTKV 218
Query: 122 EELSKAGLR-NPVRVEVRAESKSHHVSASSQ 151
++L++ LR P+ ++V + + VS SQ
Sbjct: 219 QDLARISLRPGPLLIDVDHQEATSTVSTLSQ 249
>gi|256821317|ref|YP_003145280.1| DEAD/DEAH box helicase [Kangiella koreensis DSM 16069]
gi|256794856|gb|ACV25512.1| DEAD/DEAH box helicase domain protein [Kangiella koreensis DSM
16069]
Length = 434
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 93/135 (68%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL+ Q++ Q + + L + S+++ GGV++ + K+ G ++L+ TPGRL
Sbjct: 77 LILTPTRELAEQVHQSVQKYAANL-HLNSIVVYGGVKINPQMLKLRR-GTDVLVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ME+ + + F +LE LVLDEADR+LDMGF I II +LPK R+T LFSAT +E+++
Sbjct: 135 LDLMEQ-NAVRFNDLEFLVLDEADRMLDMGFLPSIKRIIGKLPKKRQTLLFSATFSESIK 193
Query: 123 ELSKAGLRNPVRVEV 137
+S+ L NP VE
Sbjct: 194 AISQQFLTNPSLVET 208
>gi|401625920|gb|EJS43900.1| spb4p [Saccharomyces arboricola H-6]
Length = 606
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 92/157 (58%), Gaps = 11/157 (7%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPD----VKSVLLVGGVE--VKADVKKIEEEGANLLI 56
+II+PTRELS QI V F+ P +K LL+G E V+ DV + +LI
Sbjct: 87 LIIAPTRELSRQIESVVLSFLEHYPSELFPIKCQLLIGTNEGTVRDDVSNFLQNRPQILI 146
Query: 57 GTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
GTPGR+ D ++ M + ++VLDEADRLLDM F K I I+ LPK RRTGLFSAT
Sbjct: 147 GTPGRVLDFLQ-MPAVKTSACSMVVLDEADRLLDMSFIKDIERILRLLPKQRRTGLFSAT 205
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQL 153
A ++ K GLRNPVR+ V S H + SS +L
Sbjct: 206 MRSAGSDIFKTGLRNPVRITV----NSKHQAPSSLKL 238
>gi|242781952|ref|XP_002479903.1| DEAD/DEAH box helicase (Sbp4), putative [Talaromyces stipitatus
ATCC 10500]
gi|218720050|gb|EED19469.1| DEAD/DEAH box helicase (Sbp4), putative [Talaromyces stipitatus
ATCC 10500]
Length = 634
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 99/168 (58%), Gaps = 26/168 (15%)
Query: 2 GMIISPTRELSSQIYHV------------------------AQPFISTLPDVKSVLLVGG 37
+I++PTREL+SQIY+V + + S+ V LL+GG
Sbjct: 89 SIIVAPTRELASQIYNVLLSLLEFHGPSASVVKSSDETVEAVKKYPSSTLKVIPQLLLGG 148
Query: 38 VEVKA-DVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQK 95
A D+ K + N+L+GTPGRL +++ V + E+LV DEADRLLD+GF+
Sbjct: 149 TTTPAEDLSKFLKRSPNVLVGTPGRLLELLSSPHVHCPQSSFEMLVFDEADRLLDLGFKD 208
Query: 96 QISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKS 143
IS I+++LPK RRTGLFSA+ +EA++++ + GLRNPV++ V+ S
Sbjct: 209 DISKILAKLPKQRRTGLFSASVSEALDQIIRVGLRNPVKIAVKVRGAS 256
>gi|237830427|ref|XP_002364511.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
gi|211962175|gb|EEA97370.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
gi|221487590|gb|EEE25822.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii GT1]
gi|221507384|gb|EEE32988.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii VEG]
Length = 569
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 92/136 (67%), Gaps = 2/136 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++ISPTRELS QI+ VA LP L++GG K +V+K+++ G N+L+ TPGRL
Sbjct: 161 IVISPTRELSLQIFDVAAELAKFLPQTLG-LVIGGANRKHEVEKLQK-GVNILVATPGRL 218
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++ + NL LV+DEADR+L +GF+++++ I+ LP+ R+T LFSATQ+ V
Sbjct: 219 LDHLQNTKGFQYSNLLSLVIDEADRILQIGFEEEMNAILQMLPQTRQTCLFSATQSAKVA 278
Query: 123 ELSKAGLRNPVRVEVR 138
+L++ L+ PV VEV+
Sbjct: 279 DLARLSLKKPVFVEVK 294
>gi|119773890|ref|YP_926630.1| ATP-dependent RNA helicase DbpA [Shewanella amazonensis SB2B]
gi|119766390|gb|ABL98960.1| ATP-dependent RNA helicase DbpA [Shewanella amazonensis SB2B]
Length = 467
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 97/151 (64%), Gaps = 5/151 (3%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+ Q+ + + +VK + L GGV + V +E GA++++GTPGR+
Sbjct: 82 LVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQVGSLEH-GAHIIVGTPGRI 140
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D +ER D LD NL +LVLDEADR+L+MGFQ Q+ II+R P+ R+T LFSAT E ++
Sbjct: 141 VDHLER-DRLDLSNLNMLVLDEADRMLEMGFQPQLDAIIARSPRERQTLLFSATFPEQIQ 199
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQL 153
+++ + NPV V+V + +H S +Q
Sbjct: 200 TIAQQVMYNPVMVKV---ATTHEKSTIAQHF 227
>gi|425778114|gb|EKV16258.1| DEAD/DEAH box helicase (Sbp4), putative [Penicillium digitatum
PHI26]
gi|425781467|gb|EKV19431.1| DEAD/DEAH box helicase (Sbp4), putative [Penicillium digitatum Pd1]
Length = 627
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 95/162 (58%), Gaps = 25/162 (15%)
Query: 2 GMIISPTRELSSQIYHV------------------------AQPFISTLPDVKSVLLVGG 37
++ISPTREL+SQI+ V A+ STL V +LL GG
Sbjct: 86 AIVISPTRELASQIHQVLLSLLEFHPASAAAIKPAEEGAPRAKTSSSTLKVVPQLLLGGG 145
Query: 38 VEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQ 96
D+K + N+L+ TPGRL +++ V + E+LVLDEADRLLD+GF+
Sbjct: 146 TSPAEDLKLFLKNSPNVLVSTPGRLLELLSSPHVHCPQASFEMLVLDEADRLLDLGFKDD 205
Query: 97 ISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVR 138
+ I+ RLPK RRTGLFSA+ +EAV+++ + GLRNPV++ V+
Sbjct: 206 LQKILGRLPKQRRTGLFSASISEAVDQIVRLGLRNPVKIAVK 247
>gi|357627453|gb|EHJ77133.1| hypothetical protein KGM_05863 [Danaus plexippus]
Length = 824
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 106/175 (60%), Gaps = 7/175 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++ISPTREL+ QIY + + L D + L++GG +K + K++++ N+LI TPGR
Sbjct: 125 ALVISPTRELAYQIYETLRK-VGHLHDFSAGLIIGGQNLKFERKRMDQ--INILICTPGR 181
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + D L+ILVLDEADR LDMGFQ ++ II LP R+T LFSATQT++V
Sbjct: 182 LLQHMDENPLFDCSQLQILVLDEADRCLDMGFQTTMNAIIENLPPKRQTLLFSATQTKSV 241
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
++L++ L P V ++ + V+ S Q + + L ++W+ +RNH
Sbjct: 242 KDLARLSLSFPTYVAPHEQANT--VTPESLQQSYIVCEIDEKLGILWSF--IRNH 292
>gi|295150934|gb|ADF81635.1| Has1 [Heliconius erato emma]
gi|295150992|gb|ADF81664.1| Has1 [Heliconius erato favorinus x Heliconius erato emma]
Length = 238
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 107/175 (61%), Gaps = 7/175 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++ISPTREL+ QIY + + L D L++GG +K + K++++ N+LI TPGR
Sbjct: 42 ALVISPTRELAYQIYETLRK-VGHLHDFSXGLIIGGQNLKFERKRMDQ--INILICTPGR 98
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + D NL+ILVLDEADR LDMGF+ ++ II LP R+T LFSATQT++V
Sbjct: 99 LLQHMDENPLFDCSNLQILVLDEADRCLDMGFEATMNAIIENLPPKRQTLLFSATQTKSV 158
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
++L++ L P V ++++ V+ S Q + + + ++W+ ++NH
Sbjct: 159 KDLARLSLSFPTYVAPHEQAET--VTPESLQQSYIVCEIDEKVGILWSF--IKNH 209
>gi|323510203|dbj|BAJ77995.1| cgd3_1590 [Cryptosporidium parvum]
Length = 547
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 112/197 (56%), Gaps = 35/197 (17%)
Query: 1 MG-MIISPTRELSSQIYHVAQPFISTLPD----------VKSVLLVGGVEVKAD---VKK 46
MG +I++PTRELS+Q++ + + ++ + +K ++ +GG + +K+
Sbjct: 99 MGSLILTPTRELSTQVFEILERYLDIINQYREKGGSGNVLKCLICIGGGNINKTFDYIKQ 158
Query: 47 IEEEGAN-------LLIGTPGRLYDIMERM-DVLDFR---NLEILVLDEADRLLDMGFQK 95
+ EE A+ +L+GTPGR++ + E + D D+ +LEIL+LDEADRLLDMGF+
Sbjct: 159 VAEEEASEDNSKYYILVGTPGRIFHLFENLKDGFDWNIKSSLEILILDEADRLLDMGFEN 218
Query: 96 QISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNP--VRVEVRAESKSHHVSASSQQL 153
I+ I+ +PK RRTGLFSAT V+ L K GLRNP ++V + + + Q+
Sbjct: 219 HINMILHSMPKQRRTGLFSATLNSQVQNLIKTGLRNPKYIKVSISCNNLEKQNTNEKQET 278
Query: 154 ASS--------KTPLGL 162
++S P+GL
Sbjct: 279 STSIEDAECDISVPIGL 295
>gi|167521868|ref|XP_001745272.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776230|gb|EDQ89850.1| predicted protein [Monosiga brevicollis MX1]
Length = 552
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 109/180 (60%), Gaps = 11/180 (6%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G+IISPTREL+ Q Y V I D+ + L+VGG ++ + I N++I TPGR
Sbjct: 112 GLIISPTRELALQTYEVLTK-IGCFHDMSAGLVVGGTTLEREKAVIS--NTNIIICTPGR 168
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ NL++LVLDEADR+LDMGF K ++ I+ LPK R+T LFSATQT++V
Sbjct: 169 LLQHMDETFGFSCDNLQMLVLDEADRILDMGFAKTLNAILENLPKQRQTMLFSATQTKSV 228
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQL--ASSKTPLGLHLEVIWNVNQMRNHHNL 179
++L++ L+ P + V + K +A+ +L A PL L+V+++ +R+H N+
Sbjct: 229 KDLARLSLKMPEFISVHEQDK----TATPHKLVQAYMTVPLNQKLDVLFSF--IRSHVNV 282
>gi|284038208|ref|YP_003388138.1| DEAD/DEAH box helicase [Spirosoma linguale DSM 74]
gi|283817501|gb|ADB39339.1| DEAD/DEAH box helicase domain protein [Spirosoma linguale DSM 74]
Length = 380
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 97/143 (67%), Gaps = 4/143 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLP-DVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+ + PTREL+ Q+ V Q F + LP VK+V + GGV + + + + A +++ TPG
Sbjct: 76 ALALVPTRELAVQVAEVFQTFSANLPRKVKTVAVFGGVSINPQMMALRD--AEIVVATPG 133
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D+M + L +++ILVLDEAD++LD+GF++++ I RLP+ R+T LFSAT +A
Sbjct: 134 RLLDLMAS-NALQLTDVDILVLDEADKMLDLGFEEEMERIFDRLPRHRQTILFSATLGDA 192
Query: 121 VEELSKAGLRNPVRVEVRAESKS 143
+E+++K LRNPV++EV E ++
Sbjct: 193 IEDINKNLLRNPVKIEVVEEEQN 215
>gi|295151028|gb|ADF81682.1| Has1 [Heliconius erato emma]
Length = 238
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 107/175 (61%), Gaps = 7/175 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++ISPTREL+ QIY + + L D + L++GG +K + K++++ N+LI TPGR
Sbjct: 42 ALVISPTRELAYQIYETLRK-VGHLHDFSAGLIIGGQNLKFERKRMDQ--INILICTPGR 98
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + D NL+ILVLDEADR LDMGF+ ++ II LP R+T LFSATQT++V
Sbjct: 99 LLQHMDENPLFDCSNLQILVLDEADRCLDMGFEATMNAIIENLPPKRQTLLFSATQTKSV 158
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
++L++ L P V ++++ V+ S Q + + + + W+ ++NH
Sbjct: 159 KDLARLSLSFPTYVAPHEQAET--VTPESLQQSYIVCEIDEKVGIXWSF--IKNH 209
>gi|412992605|emb|CCO18585.1| predicted protein [Bathycoccus prasinos]
Length = 594
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 96/148 (64%), Gaps = 5/148 (3%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
M++SPTREL+ QIY VAQ + LL+GG +A+ +K+ + G NLL+ TPGRL
Sbjct: 175 MVLSPTRELAMQIYSVAQQLMQKHSQTHG-LLMGGANRRAEGEKLIK-GVNLLVATPGRL 232
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D M+ + +L++ V+DEADR+LD+GF++++ I+ LPK R++ LFSATQT VE
Sbjct: 233 LDHMQNTRGFQYSSLKVFVMDEADRMLDIGFEEEMRTIVKMLPKDRQSMLFSATQTTKVE 292
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASS 150
+L++ L+ P+ + V S VS +S
Sbjct: 293 DLARLSLKTPLYIGV---DDSRAVSTAS 317
>gi|390605167|gb|EIN14558.1| DEAD-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 808
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 110/182 (60%), Gaps = 4/182 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ V + I + + L++GG +K + ++ N+L+ TPGR
Sbjct: 130 ALIISPTRELAVQIFEVLRS-IGGYHNFSAGLVIGGKNLKDERDRLGR--MNILVATPGR 186
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M++ D NL+ILVLDEADR+LDMGF + +S ++S LPK R+T LFSATQT++V
Sbjct: 187 LLQHMDQTIGFDCDNLQILVLDEADRILDMGFSRTLSALLSHLPKGRQTLLFSATQTQSV 246
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNHHNLLI 181
++L++ L+NPV V + S+ + S L S+ + LE + V ++ NLL
Sbjct: 247 QDLARLSLQNPVFVSTQHASEINTKDPSKISLTSTDF-IPKTLEQHYVVCELDQKLNLLF 305
Query: 182 CL 183
Sbjct: 306 SF 307
>gi|344301778|gb|EGW32083.1| ATP-dependent rRNA helicase SPB42 [Spathaspora passalidarum NRRL
Y-27907]
Length = 617
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 106/161 (65%), Gaps = 8/161 (4%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPD----VKSVLLVGGVE-VKADVKKIEEEGANLL 55
+ +I+SPTREL++QI V I+ LP+ +K+ LLVGG V+ D+ +E +L
Sbjct: 101 LAVILSPTRELAAQIQTVIDGVIAYLPEYLKQIKTQLLVGGSSTVRDDLDSFLKEQPQIL 160
Query: 56 IGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
+GTPGR+ D + + + + +++EI +LDEAD+LL M F+ + I+ RLPK RRTGLFSA
Sbjct: 161 VGTPGRMLDFL-KSNYVKTQSVEIAILDEADKLLSMSFETDVIDILKRLPKQRRTGLFSA 219
Query: 116 TQTEAVEELSKAGLRNPVRVEVRAESKSHHVSA--SSQQLA 154
T + A + + + G+ NPV+V V++++ + S+ +S QLA
Sbjct: 220 TISSAGDTIFRTGMNNPVKVVVKSKNITGEQSSAPASLQLA 260
>gi|160380697|sp|Q0CMM5.2|DBP4_ASPTN RecName: Full=ATP-dependent RNA helicase dbp4
Length = 804
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 106/168 (63%), Gaps = 5/168 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+SPTREL+ QI+ V + + + L++GG +K + +++ + N+L+ TPGR
Sbjct: 121 ALILSPTRELAIQIFEVLRK-VGRYHHFSAGLVIGGKSLKEEQERLGK--MNILVCTPGR 177
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ +++ + D NL++LVLDEADR++DMGFQK + II LPK R+T LFSATQT+ V
Sbjct: 178 MLQHLDQTALFDTYNLQMLVLDEADRIMDMGFQKTVDAIIGHLPKERQTMLFSATQTKKV 237
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWN 169
+L++ L++P V V + S + S+ Q TPL L+++W+
Sbjct: 238 SDLARLSLQDPEYVAVHEAAAS--ATPSTLQQHYVVTPLPQKLDILWS 283
>gi|195481110|ref|XP_002101519.1| GE17675 [Drosophila yakuba]
gi|194189043|gb|EDX02627.1| GE17675 [Drosophila yakuba]
Length = 823
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 97/155 (62%), Gaps = 3/155 (1%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ + + D + L++GG +K + ++++ N+LI TPGR
Sbjct: 147 AIIISPTRELAYQIFETLKK-VGKHHDFSAGLIIGGKNLKFERTRMDQ--CNILICTPGR 203
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + + +E+LVLDEADR LDMGFQK ++ II P +R+T LFSATQT V
Sbjct: 204 LLQHMDENPLFNTSTMEVLVLDEADRCLDMGFQKALNSIIENFPPVRQTMLFSATQTNTV 263
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASS 156
++L++ L++PV V + S+S+++ S+
Sbjct: 264 QDLARLNLKDPVYVGYGGATAGEEPSSSTKKAPST 298
>gi|212526844|ref|XP_002143579.1| DEAD/DEAH box helicase (Sbp4), putative [Talaromyces marneffei ATCC
18224]
gi|210072977|gb|EEA27064.1| DEAD/DEAH box helicase (Sbp4), putative [Talaromyces marneffei ATCC
18224]
Length = 635
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 109/197 (55%), Gaps = 29/197 (14%)
Query: 3 MIISPTRELSSQIYHV------------------------AQPFISTLPDVKSVLLVGGV 38
+I++PTREL+SQIY+V + + S+ V LL+GG
Sbjct: 90 IIVAPTRELASQIYNVLLSLLEFHGPSASVIKPADETEEGVKKYPSSTLKVIPQLLLGGT 149
Query: 39 EVKA-DVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQ 96
A D+ + + N+L+GTPGRL +++ V + E+LV DEADRLLD+GF+
Sbjct: 150 TTPAEDLSQFLKRSPNVLVGTPGRLLELLSSPHVHCPQSSFEMLVFDEADRLLDLGFKDD 209
Query: 97 ISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKS---HHVSASSQQL 153
IS I+ RLPK RRTGLFSA+ +EA++++ + GLRNPV++ V+ S + +S Q+
Sbjct: 210 ISKILGRLPKQRRTGLFSASVSEALDQIIRVGLRNPVKIAVKVRGASGVEEKRTPASLQM 269
Query: 154 ASSKTPLGLHLEVIWNV 170
TP L + N+
Sbjct: 270 TYLVTPPTHKLPAVKNI 286
>gi|401411581|ref|XP_003885238.1| ATP-dependent RNA helicase DDX55,related [Neospora caninum
Liverpool]
gi|325119657|emb|CBZ55210.1| ATP-dependent RNA helicase DDX55,related [Neospora caninum
Liverpool]
Length = 569
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 92/136 (67%), Gaps = 2/136 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++ISPTRELS QI+ VA LP L++GG K +V+K+++ G N+L+ TPGRL
Sbjct: 161 IVISPTRELSLQIFDVAAELSKFLPQTLG-LVIGGANRKHEVEKLQK-GVNILVATPGRL 218
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++ + NL LV+DEADR+L +GF+++++ I+ LP+ R+T LFSATQ+ V
Sbjct: 219 LDHLQNTKGFQYSNLLSLVIDEADRILQIGFEEEMNAILQMLPQTRQTCLFSATQSAKVA 278
Query: 123 ELSKAGLRNPVRVEVR 138
+L++ L+ PV VEV+
Sbjct: 279 DLARLSLKKPVFVEVK 294
>gi|406864682|gb|EKD17726.1| ATP-dependent rRNA helicase spb4 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 664
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 97/165 (58%), Gaps = 23/165 (13%)
Query: 2 GMIISPTRELSSQIYHV--------------AQPF-------ISTLPDVKSVLLVGGVEV 40
+I+SPTREL++QI+ V +P +ST V LL+GG
Sbjct: 123 AIIVSPTRELATQIHSVLLTLLGFHQHSAEAMKPLEEGEKRKLSTTNCVVPQLLLGGTTT 182
Query: 41 KA-DVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQIS 98
A D+ + NLLI TPGRL +++ V + E+LVLDEADRLLD+GF+ +
Sbjct: 183 PAQDLSRFLRNSPNLLISTPGRLLELLSSPHVHCPQSSFEVLVLDEADRLLDLGFKDDLQ 242
Query: 99 YIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKS 143
I+ RLPK RRTGLFSA+ +EAV E+ + GLRNPV++ V+ +S S
Sbjct: 243 KILGRLPKQRRTGLFSASVSEAVGEIVRVGLRNPVKIAVKVKSAS 287
>gi|195132627|ref|XP_002010744.1| GI21709 [Drosophila mojavensis]
gi|193907532|gb|EDW06399.1| GI21709 [Drosophila mojavensis]
Length = 804
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 107/184 (58%), Gaps = 14/184 (7%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ + I D + L++GG +K + ++++ N+LI TPGR
Sbjct: 142 AIIISPTRELAYQIFETLKK-IGKYHDFSAGLIIGGKNLKFERTRMDQ--CNILICTPGR 198
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + + +E+LVLDEADR LDMGFQK ++ II P R+T LFSATQT V
Sbjct: 199 LLQHMDENPLFNATTMEVLVLDEADRCLDMGFQKTLNSIIENFPPDRQTLLFSATQTNTV 258
Query: 122 EELSKAGLRNPVRVEV-RAESKSHHVSASSQQLASSK--------TPLGLHLEVIWNVNQ 172
E+L++ L+NPV V A+S S S+ LA + PL + ++W+
Sbjct: 259 EDLARLNLKNPVYVGYGTAKSVDTKPSGSTAVLALPELLQQSYVVLPLEEKITMLWSF-- 316
Query: 173 MRNH 176
++NH
Sbjct: 317 IKNH 320
>gi|67607703|ref|XP_666829.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54657900|gb|EAL36606.1| hypothetical protein Chro.30193 [Cryptosporidium hominis]
Length = 334
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 112/197 (56%), Gaps = 35/197 (17%)
Query: 1 MG-MIISPTRELSSQIYHVAQPFISTLPD----------VKSVLLVGGVEVKAD---VKK 46
MG +I++PTRELS+Q++ + + ++ + +K ++ +GG + +K+
Sbjct: 99 MGSLILTPTRELSTQVFEILERYLDIINQYREKGGSGNVLKCLICIGGGNINKTFDYIKQ 158
Query: 47 IEEEGAN-------LLIGTPGRLYDIMERM-DVLDFR---NLEILVLDEADRLLDMGFQK 95
+ EE A+ +L+GTPGR++ + E + D D+ +LEIL+LDEADRLLDMGF+
Sbjct: 159 VAEEEASEDNSKYYILVGTPGRIFHLFENLKDGFDWNIKSSLEILILDEADRLLDMGFEN 218
Query: 96 QISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNP--VRVEVRAESKSHHVSASSQQL 153
I+ I+ +PK RRTGLFSAT V+ L K GLRNP ++V + + + Q+
Sbjct: 219 HINMILHSMPKQRRTGLFSATLNSQVQNLIKTGLRNPKYIKVSISCNNLEKQNTNEKQET 278
Query: 154 ASS--------KTPLGL 162
++S P+GL
Sbjct: 279 STSIEDAECDISVPIGL 295
>gi|242219333|ref|XP_002475447.1| predicted protein [Postia placenta Mad-698-R]
gi|220725348|gb|EED79339.1| predicted protein [Postia placenta Mad-698-R]
Length = 806
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 111/182 (60%), Gaps = 4/182 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ V + I + L++GG VK + +++ N+L+ TPGR
Sbjct: 129 ALIISPTRELAVQIFDVLRS-IGGYHSFSAGLVIGGKNVKDERERLSR--MNILVATPGR 185
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M++ + NL++LVLDEADR+LDMGFQ+ +S ++S LPK R+T LFSATQT++V
Sbjct: 186 LLQHMDQTIGFECDNLQMLVLDEADRILDMGFQRTLSALLSHLPKARQTLLFSATQTDSV 245
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNHHNLLI 181
+L++ L++PV + V + + S +Q T L L+++W+ + +L+
Sbjct: 246 SDLARLSLKDPVYIGVHDSDNASAMPKSLEQHYVLCT-LDQKLDLLWSFLKSHLQSKVLV 304
Query: 182 CL 183
L
Sbjct: 305 FL 306
>gi|322795370|gb|EFZ18163.1| hypothetical protein SINV_10215 [Solenopsis invicta]
Length = 410
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/143 (43%), Positives = 96/143 (67%), Gaps = 2/143 (1%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+I++PTREL+ QI S++ VK+V+LVGG+++ A I E+ +++I TPG
Sbjct: 65 FALILTPTRELAFQISEQFDALGSSM-GVKTVVLVGGMDMHAQ-GMILEKKPHIIIATPG 122
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D +E + R L+ LV+DEADR+L+M F+ ++ I+ +P+ RRT LFSAT T+
Sbjct: 123 RLVDHLENTKGFNLRQLKFLVMDEADRILNMDFEVEVDKILRVIPRERRTLLFSATMTKK 182
Query: 121 VEELSKAGLRNPVRVEVRAESKS 143
V++L +A LRNPVRVEV + ++
Sbjct: 183 VQKLQRASLRNPVRVEVSTKYQT 205
>gi|307103503|gb|EFN51762.1| hypothetical protein CHLNCDRAFT_139706 [Chlorella variabilis]
Length = 186
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 71/90 (78%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+SPTREL+ QI+ VAQPF++T+ ++++LLVGG + DV +E G ++L+GTPGRL
Sbjct: 78 IIVSPTRELARQIFDVAQPFVATVAWLQALLLVGGTDPAVDVAAFKEVGGHVLVGTPGRL 137
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMG 92
DIM+R +D R +E+LVLDEADRLLDMG
Sbjct: 138 DDIMQRCTTMDLRTVEVLVLDEADRLLDMG 167
>gi|198424759|ref|XP_002127650.1| PREDICTED: similar to Ddx10 protein [Ciona intestinalis]
Length = 736
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 105/176 (59%), Gaps = 7/176 (3%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++ISPTREL+ QI+ V + + + + LL+GG VK + + + N++I TPGR
Sbjct: 123 ALVISPTRELAFQIFEVLKK-VGGKHNFSAGLLIGGNNVKEEAHSVGK--TNIIICTPGR 179
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ NL++L+LDEADR+LDMGF+ + II LP R+T LFSATQT++V
Sbjct: 180 LLQHMDTTSYFHMNNLKMLILDEADRILDMGFKTTLDAIIENLPSERQTLLFSATQTKSV 239
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNHH 177
++L++ LR+P + V +E+K +Q+ + L L V+++ +RNH
Sbjct: 240 KDLARLSLRDPAYISVHSEAKHSTPQGLTQRFICCE--LKDKLNVLFSF--IRNHQ 291
>gi|396498370|ref|XP_003845205.1| similar to ATP-dependent rRNA helicase spb4 [Leptosphaeria maculans
JN3]
gi|312221786|emb|CBY01726.1| similar to ATP-dependent rRNA helicase spb4 [Leptosphaeria maculans
JN3]
Length = 636
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 106/196 (54%), Gaps = 36/196 (18%)
Query: 2 GMIISPTRELSSQIYHV------------------------------AQPFI--STLPDV 29
+IISPTREL++QI+ V +P T+ V
Sbjct: 87 AIIISPTRELATQIHTVLCSLLKFHAPSAAMLEPEDEDTDMEDADAPPKPLFPPGTVKVV 146
Query: 30 KSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRL 88
+LL G V D+ + + N+LIGTPGRL +++ V + + LVLDEADRL
Sbjct: 147 PQLLLGGSVTPAQDLSRFLKSQTNVLIGTPGRLLELLSSPHVHCSQTSFDALVLDEADRL 206
Query: 89 LDMGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSA 148
LD+GF+ + I+SRLPK RRTGLFSA+ +EAV++L + GLRNPVR+ V+ +++S +
Sbjct: 207 LDLGFKDDLQRILSRLPKQRRTGLFSASVSEAVDQLIRVGLRNPVRIAVKVKARS---TG 263
Query: 149 SSQQLASSKTPLGLHL 164
+ +TP L +
Sbjct: 264 QDGAIEDKRTPASLQM 279
>gi|156844604|ref|XP_001645364.1| hypothetical protein Kpol_1058p43 [Vanderwaltozyma polyspora DSM
70294]
gi|160358677|sp|A7TJS7.1|SPB4_VANPO RecName: Full=ATP-dependent rRNA helicase SPB4
gi|156116025|gb|EDO17506.1| hypothetical protein Kpol_1058p43 [Vanderwaltozyma polyspora DSM
70294]
Length = 607
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 95/148 (64%), Gaps = 7/148 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPD----VKSVLLVGG--VEVKADVKKIEEEGANLL 55
+I+SPT+EL+ QI+ V + F+ P+ ++S LLVG V+ DV E +L
Sbjct: 86 SLIVSPTKELAKQIHSVFESFLEHYPENLYPIRSQLLVGTNVKTVRDDVSDFMENKPQIL 145
Query: 56 IGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
IGTPGR+ D + ++ + +++LDEADRLLD+ F K + I++ LPK RRTGLFSA
Sbjct: 146 IGTPGRILDFL-KIPSVKTSMCSMVILDEADRLLDVSFLKDMENIMNILPKQRRTGLFSA 204
Query: 116 TQTEAVEELSKAGLRNPVRVEVRAESKS 143
T T A + + K GLRNPV+V V ++S++
Sbjct: 205 TITSAGDNIFKTGLRNPVKVTVNSKSQA 232
>gi|157962845|ref|YP_001502879.1| DEAD/DEAH box helicase [Shewanella pealeana ATCC 700345]
gi|157847845|gb|ABV88344.1| DEAD/DEAH box helicase domain protein [Shewanella pealeana ATCC
700345]
Length = 414
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 111/178 (62%), Gaps = 13/178 (7%)
Query: 2 GMIISPTRELSSQIY-HVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+I+ PTREL+ Q+ +V+Q ++T D+ SV++ GGV + A K+ G ++++ TPG
Sbjct: 81 ALILVPTRELAVQVNGNVSQYAVNT--DIASVVIYGGVSIDAQATKLAA-GCDIIVATPG 137
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D + R L+ +++ LV DEADR+LDMGF +IS I++RLP R+T LFSAT + A
Sbjct: 138 RLLDHLRRGS-LNLSSIDYLVFDEADRMLDMGFMDEISAILTRLPAKRQTSLFSATFSTA 196
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQL-----ASSKTPLGLHLEVIWNVNQM 173
+ +LSK L P R+EV K++ + S +Q+ + KT L HL ++ +Q+
Sbjct: 197 IYDLSKKLLHKPARIEV---DKANSAADSVEQIVYAVDSDRKTELICHLIKKYDWHQV 251
>gi|226288987|gb|EEH44499.1| ATP-dependent rRNA helicase SPB4 [Paracoccidioides brasiliensis
Pb18]
Length = 645
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 104/185 (56%), Gaps = 35/185 (18%)
Query: 2 GMIISPTRELSSQIYHVAQ-------PFISTLPDVKS----------------------- 31
+IISPTREL++QIY+V Q P + L ++
Sbjct: 90 AIIISPTRELATQIYNVLQSLLAFHGPSATCLQSAENGIGEQNESNPPPPYPSSVLKIVP 149
Query: 32 VLLVGGVEVKA-DVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLL 89
LL+GG A D+ ++ N+LI TPGRL +++ V + E+LVLDEADRLL
Sbjct: 150 QLLLGGTTTPAQDLSTFLKQSPNVLISTPGRLLELLASPHVHCPQSSFEVLVLDEADRLL 209
Query: 90 DMGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVR---AESKSHHV 146
D+GFQ+ + I+ RLPK RRTGLFSA+ +EAV+++ + GLRNPV++ V+ A S+
Sbjct: 210 DLGFQEDLQKILQRLPKQRRTGLFSASVSEAVDQIVRVGLRNPVKISVKVKGAGSEDKRT 269
Query: 147 SASSQ 151
AS Q
Sbjct: 270 PASLQ 274
>gi|91208168|sp|Q4WYJ7.2|SPB4_ASPFU RecName: Full=ATP-dependent rRNA helicase spb4
Length = 640
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 96/168 (57%), Gaps = 26/168 (15%)
Query: 2 GMIISPTRELSSQIYHVAQPFI-------------------------STLPDVKSVLLVG 36
+IISPTREL+SQIY+V + STL V +LL G
Sbjct: 90 AIIISPTRELASQIYNVLSSLLAFHPPSAAAINPSEDDDAPRPKFPSSTLKVVPQLLLGG 149
Query: 37 GVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQK 95
D+ + N+L+ TPGRL +++ V + E+LVLDEADRLLD+GF++
Sbjct: 150 STTPAEDLSTFLKRSPNVLVSTPGRLLELLSSPHVHCPQSSFEMLVLDEADRLLDLGFKE 209
Query: 96 QISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKS 143
+ I+ RLPK RRTGLFSA+ +EAV+++ + GLRNPV+V V+ + S
Sbjct: 210 TLQNILRRLPKQRRTGLFSASVSEAVDQIVRVGLRNPVKVMVKVKGGS 257
>gi|448124447|ref|XP_004204921.1| Piso0_000207 [Millerozyma farinosa CBS 7064]
gi|358249554|emb|CCE72620.1| Piso0_000207 [Millerozyma farinosa CBS 7064]
Length = 611
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 96/146 (65%), Gaps = 6/146 (4%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPD----VKSVLLVGGVE-VKADVKKIEEEGANLL 55
++++PTREL++QI V + LPD +K+ LL+G + V+AD++ +E +L
Sbjct: 95 FAIVLAPTRELANQIQTVFHGLLKFLPDEQAPIKTQLLIGSLSSVRADIEFFFKERPQIL 154
Query: 56 IGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
+GTPGR+ D V ++E++VLDEAD+LLD F+K+++ ++ +PK RRTGLFSA
Sbjct: 155 VGTPGRMLDFFSNQKV-KTSSVEVVVLDEADKLLDFTFEKEVTTLLRLMPKQRRTGLFSA 213
Query: 116 TQTEAVEELSKAGLRNPVRVEVRAES 141
T + A ++L G+ NPV++ V++ S
Sbjct: 214 TLSSASDKLFSTGITNPVKISVKSNS 239
>gi|66359108|ref|XP_626732.1| Spb4p, eIF4a-1-family RNA SFII helicase, DEXDc+HELICc domains
[Cryptosporidium parvum Iowa II]
gi|46228379|gb|EAK89278.1| Spb4p, eIF4a-1-family RNA SFII helicase, DEXDc+HELICc domains
[Cryptosporidium parvum Iowa II]
Length = 792
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 67/194 (34%), Positives = 110/194 (56%), Gaps = 34/194 (17%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPD----------VKSVLLVGGVEVKAD---VKKIEE 49
+I++PTRELS+Q++ + + ++ + +K ++ +GG + +K++ E
Sbjct: 109 LILTPTRELSTQVFEILERYLDIINQYREKGGSGNVLKCLICIGGGNINKTFDYIKQVAE 168
Query: 50 EGAN-------LLIGTPGRLYDIMERM-DVLDFR---NLEILVLDEADRLLDMGFQKQIS 98
E A+ +L+GTPGR++ + E + D D+ +LEIL+LDEADRLLDMGF+ I+
Sbjct: 169 EEASEDNSKYYILVGTPGRIFHLFENLKDGFDWNIKSSLEILILDEADRLLDMGFENHIN 228
Query: 99 YIISRLPKLRRTGLFSATQTEAVEELSKAGLRNP--VRVEVRAESKSHHVSASSQQLASS 156
I+ +PK RRTGLFSAT V+ L K GLRNP ++V + + + Q+ ++S
Sbjct: 229 MILHSMPKQRRTGLFSATLNSQVQNLIKTGLRNPKYIKVSISCNNLEKQNTNEKQETSTS 288
Query: 157 --------KTPLGL 162
P+GL
Sbjct: 289 IEDAECDISVPIGL 302
>gi|295151056|gb|ADF81696.1| Has1 [Heliconius erato favorinus x Heliconius erato emma]
Length = 238
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 107/175 (61%), Gaps = 7/175 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++ISPTREL+ QIY + L D + L++GG +K + K++++ N+LI TPGR
Sbjct: 42 ALVISPTRELAYQIYETLRK-XGHLHDFSAGLIIGGQNLKFERKRMDQ--INILICTPGR 98
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + D NL+ILVLDEADR LDMGF+ ++ II LP R+T LFSATQT++V
Sbjct: 99 LLQHMDENPLFDCSNLQILVLDEADRCLDMGFEATMNAIIENLPPKRQTLLFSATQTKSV 158
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
++L++ L P V ++++ V+ S Q + + + ++W+ ++NH
Sbjct: 159 KDLARLSLSFPTYVAPHEQAET--VTPESLQQSYIVCEIDEKVGILWSF--IKNH 209
>gi|323508667|dbj|BAJ77227.1| cgd3_1590 [Cryptosporidium parvum]
Length = 290
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 108/183 (59%), Gaps = 27/183 (14%)
Query: 1 MG-MIISPTRELSSQIYHVAQPFISTLPD----------VKSVLLVGGVEVKAD---VKK 46
MG +I++PTRELS+Q++ + + ++ + +K ++ +GG + +K+
Sbjct: 99 MGSLILTPTRELSTQVFEILERYLDIINQYREKGGSGNVLKCLICIGGGNINKTFDYIKQ 158
Query: 47 IEEEGAN-------LLIGTPGRLYDIMERM-DVLDFR---NLEILVLDEADRLLDMGFQK 95
+ EE A+ +L+GTPGR++ + E + D D+ +LEIL+LDEADRLLDMGF+
Sbjct: 159 VAEEEASEDNSKYYILVGTPGRIFHLFENLKDGFDWNIKSSLEILILDEADRLLDMGFEN 218
Query: 96 QISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNP--VRVEVRAESKSHHVSASSQQL 153
I+ I+ +PK RRTGLFSAT V+ L K GLRNP ++V + + + Q+
Sbjct: 219 HINMILHSMPKQRRTGLFSATLNSQVQNLIKTGLRNPKYIKVSISCNNLEKQNTNEKQET 278
Query: 154 ASS 156
++S
Sbjct: 279 STS 281
>gi|367034786|ref|XP_003666675.1| hypothetical protein MYCTH_2084467 [Myceliophthora thermophila ATCC
42464]
gi|347013948|gb|AEO61430.1| hypothetical protein MYCTH_2084467 [Myceliophthora thermophila ATCC
42464]
Length = 645
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 103/189 (54%), Gaps = 28/189 (14%)
Query: 2 GMIISPTRELSSQIYHVAQPFI---------------------STLPDVKSVLLVGG-VE 39
G+IISPTREL+SQIY+V I +T P + LLVGG ++
Sbjct: 91 GIIISPTRELASQIYNVLVSLIRFHAPSADLLSYSKSDEKRPATTEPVIVPQLLVGGTIK 150
Query: 40 VKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQIS 98
D+ NLL+GTPGRL +++ V + E+LV+DEADRLLD+GF +I+
Sbjct: 151 AAEDLSTFLRLSPNLLVGTPGRLAELLSSPYVKAPASSFEVLVMDEADRLLDLGFSPEIT 210
Query: 99 YIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKT 158
I+ LPK RRTGLFSA+ +EAVE L GL P ++ VR +S ++ KT
Sbjct: 211 RILGYLPKQRRTGLFSASLSEAVERLITVGLLYPHKITVRVKSLK-----DGGEIQERKT 265
Query: 159 PLGLHLEVI 167
P+ L + I
Sbjct: 266 PMSLQMSYI 274
>gi|402076157|gb|EJT71580.1| ATP-dependent rRNA helicase spb-4 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 632
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 95/159 (59%), Gaps = 23/159 (14%)
Query: 2 GMIISPTRELSSQIYHVAQ-------------PFI--------STLPDVKSVLLVGG-VE 39
+I+SPTREL++QI+ V PF+ + +P + S LLVGG V+
Sbjct: 89 AVIVSPTRELATQIHSVLTSIISFHAPSAGLVPFLKGDEKRPETAVPVLVSQLLVGGTVK 148
Query: 40 VKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQIS 98
D+ N+L+GTPGRL +++ V + E+LVLDEADRLLD GFQ ++
Sbjct: 149 AAQDLSAFLRTSPNILVGTPGRLAELLSSPHVHTPQSSFEVLVLDEADRLLDQGFQNELQ 208
Query: 99 YIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEV 137
I+ LPK RRTGLFSA+ ++AV EL +AGLRNP RV V
Sbjct: 209 RILGFLPKQRRTGLFSASVSDAVGELVRAGLRNPQRVAV 247
>gi|295151054|gb|ADF81695.1| Has1 [Heliconius erato favorinus x Heliconius erato emma]
Length = 238
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 106/175 (60%), Gaps = 7/175 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++ISPTREL+ QIY + + L D + L++GG +K + K++++ N+LI TPGR
Sbjct: 42 ALVISPTRELAYQIYETLRK-VGHLHDFSAGLIIGGQNLKFERKRMDQ--INILICTPGR 98
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + D NL+ILVLDEADR LDMGF+ ++ II LP R+T LFSATQT++V
Sbjct: 99 LLQHMDENPLFDCSNLQILVLDEADRCLDMGFEATMNAIIENLPPKRQTLLFSATQTKSV 158
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
++L++ L P V ++++ V+ S Q + + + W+ ++NH
Sbjct: 159 KDLARLSLSFPTYVAPHEQAET--VTPESLQQSYIVCEIDEKXGIXWSF--IKNH 209
>gi|255938169|ref|XP_002559855.1| Pc13g14480 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584475|emb|CAP92517.1| Pc13g14480 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 628
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 97/167 (58%), Gaps = 25/167 (14%)
Query: 2 GMIISPTRELSSQIYHVAQPFI------------------------STLPDVKSVLLVGG 37
++ISPTREL+SQI+ V + STL V +LL GG
Sbjct: 86 AIVISPTRELASQIHQVLLSLLEFHPASAAAIKPAEDGAPRPKTSSSTLKVVPQLLLGGG 145
Query: 38 VEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQ 96
D+K + N+L+ TPGRL +++ V + E+LVLDEADRLLD+GF+
Sbjct: 146 TSPAEDLKLFLKNSPNVLVSTPGRLLELLSSPHVHCPQASFEMLVLDEADRLLDLGFKDD 205
Query: 97 ISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKS 143
+ I++RLPK RRTGLFSA+ +EAV+++ + GLRNPV++ V+ + S
Sbjct: 206 LQKILNRLPKQRRTGLFSASISEAVDQIVRLGLRNPVKIAVKVKGGS 252
>gi|119490959|ref|XP_001263140.1| DEAD/DEAH box helicase (Sbp4), putative [Neosartorya fischeri NRRL
181]
gi|143585859|sp|A1D699.1|SPB4_NEOFI RecName: Full=ATP-dependent rRNA helicase spb4
gi|119411300|gb|EAW21243.1| DEAD/DEAH box helicase (Sbp4), putative [Neosartorya fischeri NRRL
181]
Length = 640
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 96/168 (57%), Gaps = 26/168 (15%)
Query: 2 GMIISPTRELSSQIYHVAQPFI-------------------------STLPDVKSVLLVG 36
+IISPTREL+SQIY+V + STL V +LL G
Sbjct: 90 AIIISPTRELASQIYNVLSSLLAFHPPSAAAINPSEDDDAPRPKFPSSTLKVVPQLLLGG 149
Query: 37 GVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQK 95
D+ + N+L+ TPGRL +++ V + E+LVLDEADRLLD+GF++
Sbjct: 150 STTPAEDLSTFLKRSPNVLVSTPGRLLELLSSPHVHCPQSSFEMLVLDEADRLLDLGFKE 209
Query: 96 QISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKS 143
+ I+ RLPK RRTGLFSA+ +EAV+++ + GLRNPV+V V+ + S
Sbjct: 210 TLQNILRRLPKQRRTGLFSASVSEAVDQIVRVGLRNPVKVMVKVKGGS 257
>gi|70999145|ref|XP_754294.1| DEAD/DEAH box helicase (Sbp4) [Aspergillus fumigatus Af293]
gi|66851931|gb|EAL92256.1| DEAD/DEAH box helicase (Sbp4), putative [Aspergillus fumigatus
Af293]
gi|159127311|gb|EDP52426.1| DEAD/DEAH box helicase (Sbp4), putative [Aspergillus fumigatus
A1163]
Length = 651
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 96/168 (57%), Gaps = 26/168 (15%)
Query: 2 GMIISPTRELSSQIYHVAQPFI-------------------------STLPDVKSVLLVG 36
+IISPTREL+SQIY+V + STL V +LL G
Sbjct: 90 AIIISPTRELASQIYNVLSSLLAFHPPSAAAINPSEDDDAPRPKFPSSTLKVVPQLLLGG 149
Query: 37 GVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQK 95
D+ + N+L+ TPGRL +++ V + E+LVLDEADRLLD+GF++
Sbjct: 150 STTPAEDLSTFLKRSPNVLVSTPGRLLELLSSPHVHCPQSSFEMLVLDEADRLLDLGFKE 209
Query: 96 QISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKS 143
+ I+ RLPK RRTGLFSA+ +EAV+++ + GLRNPV+V V+ + S
Sbjct: 210 TLQNILRRLPKQRRTGLFSASVSEAVDQIVRVGLRNPVKVMVKVKGGS 257
>gi|194892032|ref|XP_001977582.1| GG19124 [Drosophila erecta]
gi|190649231|gb|EDV46509.1| GG19124 [Drosophila erecta]
Length = 827
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 97/155 (62%), Gaps = 3/155 (1%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ + + D + L++GG +K + ++++ N+LI TPGR
Sbjct: 147 AIIISPTRELAYQIFETLKK-VGKHHDFSAGLIIGGKNLKFERTRMDQ--CNILICTPGR 203
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + + +E+LVLDEADR LDMGFQK ++ II P +R+T LFSATQT V
Sbjct: 204 LLQHMDENPLFNTSTMEVLVLDEADRCLDMGFQKALNSIIENFPPVRQTLLFSATQTNTV 263
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASS 156
++L++ L++PV V + S+S+++ S+
Sbjct: 264 QDLARLNLKDPVYVGYGGATPGEEPSSSTKKAPST 298
>gi|296282684|ref|ZP_06860682.1| DNA and RNA helicase [Citromicrobium bathyomarinum JL354]
Length = 472
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 98/147 (66%), Gaps = 4/147 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++Q+ + + D++ LL+GGV++ VK + E G ++LI TPGRL
Sbjct: 76 LILAPTRELAAQVAENFEKY-GKQHDLQLALLIGGVQMGDQVKALNE-GVDVLIATPGRL 133
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ ER +L E+LV+DEADR+LDMGF I I S+LP+ R+T LFSAT +E
Sbjct: 134 MDLFERGKIL-LNGCELLVIDEADRMLDMGFIPDIETICSKLPEPRQTLLFSATMPPPIE 192
Query: 123 ELSKAGLRNPVRVEV-RAESKSHHVSA 148
+L++ L NP R+EV RA S + +++A
Sbjct: 193 KLAQKFLTNPKRIEVSRAASTNENITA 219
>gi|317027080|ref|XP_001400050.2| ATP-dependent rRNA helicase spb4 [Aspergillus niger CBS 513.88]
gi|143585830|sp|A2QE29.2|SPB4_ASPNC RecName: Full=ATP-dependent rRNA helicase spb4
Length = 642
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 97/169 (57%), Gaps = 27/169 (15%)
Query: 2 GMIISPTRELSSQIYHV-------------------------AQPFISTLPDVKSVLLVG 36
+IISPTREL+SQIY+V Q F S+ V LL+G
Sbjct: 90 AIIISPTRELASQIYNVLTSLLAFHPPSASTLKPSDDDDDAPRQKFPSSTLKVVPQLLLG 149
Query: 37 GVEVKA-DVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQ 94
G A D+ + NLL+ TPGRL +++ V + E+LV+DEADRLLD+GF+
Sbjct: 150 GSTTPAEDLSTFLKRSPNLLVSTPGRLLELLSSPHVHCPQSSFEMLVMDEADRLLDLGFK 209
Query: 95 KQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKS 143
+ I+ RLPK RRTGLFSA+ +EAV+++ + GLRNPV+V V+ + S
Sbjct: 210 DTLQNILRRLPKQRRTGLFSASVSEAVDQIVRVGLRNPVKVMVKVKGTS 258
>gi|156040409|ref|XP_001587191.1| hypothetical protein SS1G_12221 [Sclerotinia sclerotiorum 1980]
gi|160358676|sp|A7F2S3.1|SPB4_SCLS1 RecName: Full=ATP-dependent rRNA helicase spb4
gi|154696277|gb|EDN96015.1| hypothetical protein SS1G_12221 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 625
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 107/183 (58%), Gaps = 26/183 (14%)
Query: 2 GMIISPTRELSSQIYHVAQPFI----------------------STLPDVKSVLLVGGVE 39
+I+SPTREL++QI+ V + STL V S LL+GG
Sbjct: 90 AIIVSPTRELATQIHSVLTSLLAFHEPSAGALKPLEEGEKRKPSSTL-RVVSQLLLGGTT 148
Query: 40 VKA-DVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQI 97
A D+ + + NLLI TPGRL +++ V + E+LVLDEADRLLD+GF+ +
Sbjct: 149 TPAQDLSRFLKNSPNLLISTPGRLLELLSSPHVHCPQSSFEVLVLDEADRLLDLGFKDDL 208
Query: 98 SYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAE-SKSHHVSASSQQLASS 156
I+SRLPK RRTGLFSA+ +EAV E+ + GLRNPV++ V+ + + ++ +S Q++
Sbjct: 209 QKILSRLPKQRRTGLFSASVSEAVGEIVRVGLRNPVKIAVKVKGAGGDKMTPASLQMSYL 268
Query: 157 KTP 159
TP
Sbjct: 269 LTP 271
>gi|358367994|dbj|GAA84612.1| ATP-dependent rRNA helicase Spb4 [Aspergillus kawachii IFO 4308]
Length = 641
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 97/169 (57%), Gaps = 27/169 (15%)
Query: 2 GMIISPTRELSSQIYHV-------------------------AQPFISTLPDVKSVLLVG 36
+IISPTREL+SQIY+V Q F S+ V LL+G
Sbjct: 90 AIIISPTRELASQIYNVLTSLLAFHPPSAAGLKPSDEDDDAPRQKFPSSTLKVVPQLLLG 149
Query: 37 GVEVKA-DVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQ 94
G A D+ + NLL+ TPGRL +++ V + E+LV+DEADRLLD+GF+
Sbjct: 150 GSTTPAEDLSTFLKRSPNLLVSTPGRLLELLSSPHVHCPQSSFEMLVMDEADRLLDLGFK 209
Query: 95 KQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKS 143
+ I+ RLPK RRTGLFSA+ +EAV+++ + GLRNPV+V V+ + S
Sbjct: 210 DTLQNILRRLPKQRRTGLFSASVSEAVDQIVRVGLRNPVKVMVKVKGTS 258
>gi|346975249|gb|EGY18701.1| ATP-dependent rRNA helicase SPB4 [Verticillium dahliae VdLs.17]
Length = 421
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 95/164 (57%), Gaps = 23/164 (14%)
Query: 1 MGMIISPTRELSSQIYHVAQ-------------PFI--------STLPDVKSVLLVGGVE 39
+I+SPTREL+ QIY+V PF+ S +P V LLVGG
Sbjct: 92 FAIIVSPTRELAQQIYNVLMGLIAFHTASSEMLPFLKEDDKRPDSAVPIVVPQLLVGGTT 151
Query: 40 V-KADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQI 97
+ D+ N+L+ TPGRL +++ V ++LVLDEADR+LDMGF++ +
Sbjct: 152 TTQQDLSFFVRHSPNILVSTPGRLVELLASPHVHCSQSTFDMLVLDEADRILDMGFRQDL 211
Query: 98 SYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAES 141
I+S LPK RRTGLFSA+ +EAV ++ GLRNPV++ VR +S
Sbjct: 212 QRILSHLPKQRRTGLFSASVSEAVSQIITVGLRNPVKIAVRVKS 255
>gi|224126463|ref|XP_002319844.1| predicted protein [Populus trichocarpa]
gi|222858220|gb|EEE95767.1| predicted protein [Populus trichocarpa]
Length = 766
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 116/182 (63%), Gaps = 4/182 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G+IISPTREL+ Q++ V + + + + LL+GG + + +++K ++L+ TPGR
Sbjct: 143 GIIISPTRELAGQLFDVLKT-VGKFHNFSAGLLIGGRK-EVEMEKEHVNALSILVCTPGR 200
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ D L++LVLDEADR+LD+GF+K ++ I+++LPK R+T LFSATQT+++
Sbjct: 201 LLQHMDETPNFDCSQLQVLVLDEADRILDVGFKKTLNAIVAQLPKHRQTLLFSATQTKSI 260
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNHHNLLI 181
++L++ L++P + V ++++ + S Q + PL L+++W+ + + +L+
Sbjct: 261 QDLARLSLKDPEYISVHEDAET--ATPSRLQQTAMIVPLEQKLDMLWSFVKAHLNSKILV 318
Query: 182 CL 183
L
Sbjct: 319 FL 320
>gi|146414812|ref|XP_001483376.1| hypothetical protein PGUG_04105 [Meyerozyma guilliermondii ATCC
6260]
Length = 754
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 102/168 (60%), Gaps = 4/168 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+SPTREL+ Q + V I + L+ GG +VK + ++I N+LIGTPGR
Sbjct: 121 ALIVSPTRELAVQTFEVLTK-IGKYNSFSAGLVTGGKDVKYEKERISR--MNILIGTPGR 177
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ + ++ NL++LVLDEADR LDMGF+KQI I+ LP R+T LFSATQ++ V
Sbjct: 178 ISQHLNEAVGMETSNLQVLVLDEADRCLDMGFRKQIDNILGHLPVTRQTLLFSATQSDNV 237
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWN 169
++L++ L NP RV V ++ + + S +Q K L ++V+W+
Sbjct: 238 KDLARLSLVNPKRVGVSSDQEVSSIPESLEQYY-IKISLASKMDVLWS 284
>gi|170090944|ref|XP_001876694.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648187|gb|EDR12430.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 637
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 101/169 (59%), Gaps = 21/169 (12%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKS---------------VLLVGG--VEVKADV 44
++I+PTREL++QI+ + F+S P +LLV D+
Sbjct: 87 ALVITPTRELATQIHSIFALFLSAQPKESCSQPDGQPTEPFYPPPLLLVSSDHSSPAQDL 146
Query: 45 KKIEEEGANLLIGTPGRLYDIM--ERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIIS 102
++ GA++++GTPGR+ + + + ++ + LE+LVLDEADRLLD+GFQ I+ II+
Sbjct: 147 ERFFLTGADIIVGTPGRVEEFLLGKGRSSVNIKELEVLVLDEADRLLDLGFQAAITRIIT 206
Query: 103 RLPKLRRTGLFSATQT--EAVEELSKAGLRNPVRVEVRAESKSHHVSAS 149
LPK RRTGLFSAT T +A+ EL + GLRNP R+ V+ + + S+S
Sbjct: 207 YLPKQRRTGLFSATMTDADALSELVRVGLRNPARIVVKRRTPARSASSS 255
>gi|390365105|ref|XP_788362.3| PREDICTED: ATP-dependent RNA helicase DDX55-like, partial
[Strongylocentrotus purpuratus]
Length = 486
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/117 (56%), Positives = 78/117 (66%), Gaps = 15/117 (12%)
Query: 52 ANLLIGTPGRLYDIMERMDV-----LDFRNLEILVLDEADRLLDMGFQKQISYIISRLPK 106
AN+LI TPGRL D+ ER ++LE+LVLDEADRLLDMGF K I+ I+ LPK
Sbjct: 1 ANILIATPGRLEDMFERPTTGISLPAMVKSLEVLVLDEADRLLDMGFTKSINTILGYLPK 60
Query: 107 LRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAE-SKSHHVSASSQQLASSKTPLGL 162
RRTGLFSATQTE VE L +AGLRNPVR+ V+ + S S HV +TPL L
Sbjct: 61 QRRTGLFSATQTEEVEALIRAGLRNPVRIVVKEKNSSSTHV---------RRTPLTL 108
>gi|225681810|gb|EEH20094.1| ATP-dependent rRNA helicase spb4 [Paracoccidioides brasiliensis
Pb03]
Length = 645
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 104/185 (56%), Gaps = 35/185 (18%)
Query: 2 GMIISPTRELSSQIYHVAQ-------PFISTLPDVKS----------------------- 31
+IISPTREL++QIY+V Q P + L ++
Sbjct: 90 AIIISPTRELATQIYNVLQSLLAFHGPSATCLQSAENGIGEQNESNPPPPYPSSVLKIVP 149
Query: 32 VLLVGGVEVKA-DVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLL 89
LL+GG A D+ ++ N+LI TPGRL +++ V + E+LVLDEADRLL
Sbjct: 150 QLLLGGTTTPAQDLSTFLKQSPNVLISTPGRLLELLASPYVHCPQSSFEVLVLDEADRLL 209
Query: 90 DMGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVR---AESKSHHV 146
D+GFQ+ + I+ RLPK RRTGLFSA+ +EAV+++ + GLRNPV++ V+ A S+
Sbjct: 210 DLGFQEDLQKILQRLPKQRRTGLFSASVSEAVDQIVRVGLRNPVKISVKVKGAGSEDKRT 269
Query: 147 SASSQ 151
AS Q
Sbjct: 270 PASLQ 274
>gi|150951242|ref|XP_001387532.2| ATP-dependent RNA helicase DBP4 (Helicase CA4) (Helicase UF1)
[Scheffersomyces stipitis CBS 6054]
gi|284018077|sp|A3GGE9.2|DBP4_PICST RecName: Full=ATP-dependent RNA helicase DBP4
gi|149388432|gb|EAZ63509.2| ATP-dependent RNA helicase DBP4 (Helicase CA4) (Helicase UF1)
[Scheffersomyces stipitis CBS 6054]
Length = 765
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 103/170 (60%), Gaps = 8/170 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+SPTREL+ Q + V I + L+ GG +V+ + +++ N+L+GTPGR
Sbjct: 122 ALIVSPTRELAVQTFEVLTK-IGKYNTFSAGLVTGGKDVQYEKERVSR--MNILVGTPGR 178
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ + ++ NL++LVLDEADR LDMGF+KQI I+ LP R+T LFSAT +++V
Sbjct: 179 ISQHLNEAVGMETSNLQVLVLDEADRCLDMGFKKQIDNIVGHLPPTRQTLLFSATVSDSV 238
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASS--KTPLGLHLEVIWN 169
++L++ L NP R+ V S VSA+ + L + PL L+V+W+
Sbjct: 239 KDLARLSLTNPKRIGV---SSDQDVSATPESLDQYYIRIPLDEKLDVLWS 285
>gi|443897807|dbj|GAC75146.1| ATP-dependent RNA helicase [Pseudozyma antarctica T-34]
Length = 1540
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 103/172 (59%), Gaps = 12/172 (6%)
Query: 18 VAQPFISTLPDVKSVLLVGGVEVKA--DVKKIEEEGANLLIGTPGRLYDIMERMDVLDFR 75
VAQ T + L+VGG + D + + GA++L+GTPGRL +++ + V
Sbjct: 966 VAQAPKKTTRIAGAQLVVGGSKSTPLDDYRTFRDGGADILVGTPGRLEELLTKKGVKKG- 1024
Query: 76 NLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRV 135
L++LVLDEADRLLD+GF + + I+S LPK RRTGLFSAT T+A+ EL + GLRNPVRV
Sbjct: 1025 ELDVLVLDEADRLLDLGFTENLHRILSLLPKQRRTGLFSATMTDALSELVRMGLRNPVRV 1084
Query: 136 EVRAESKSHH----VSASSQQLASSKTPLGLHLEVIWNVNQMRNHHNLLICL 183
V+ E+K+ ++SS+ S +TP L N+ Q+ N L L
Sbjct: 1085 VVKVEAKTKAGTSTKASSSKADESRRTPASLQ-----NLFQVSRPENKLAQL 1131
>gi|319411625|emb|CBQ73669.1| related to SPB4-ATP-dependent RNA helicase of DEAH box family
[Sporisorium reilianum SRZ2]
Length = 799
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 97/153 (63%), Gaps = 8/153 (5%)
Query: 33 LLVGGVEVKA--DVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLD 90
L+VGG + D + + GA++L+GTPGRL +++ R V LE+L+LDEADRLLD
Sbjct: 194 LVVGGSKSTPLDDYRIFRDSGADILVGTPGRLEELLSRKGVKK-SQLEVLILDEADRLLD 252
Query: 91 MGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASS 150
+GF + + I++ LP+ RRTGLFSAT T+A+ EL + GLRNPVRV V+ E+K+ +AS+
Sbjct: 253 LGFTENLRRILALLPRQRRTGLFSATMTDALSELVRMGLRNPVRVVVKVETKNKAAAASA 312
Query: 151 QQLASSKTPLGLHLEVIWNVNQMRNHHNLLICL 183
S +TP L N+ Q+ N L L
Sbjct: 313 GADDSRRTPATLQ-----NLFQVSRPENKLAQL 340
>gi|327307018|ref|XP_003238200.1| ATP-dependent rRNA helicase spb4 [Trichophyton rubrum CBS 118892]
gi|326458456|gb|EGD83909.1| ATP-dependent rRNA helicase spb4 [Trichophyton rubrum CBS 118892]
Length = 656
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 110/210 (52%), Gaps = 52/210 (24%)
Query: 2 GMIISPTRELSSQIYHV-----------------------------AQPFISTLPDVKSV 32
+I+SPTREL+ QIY V +P+ S+ V
Sbjct: 90 AIIVSPTRELAEQIYSVLLSLLAFHGPSTSKLAQLDGKEPQLDPETGKPYRSSTLTVIPQ 149
Query: 33 LLVGGVEVKA-DVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLD 90
LL+GG A D+ + NLLI TPGRL +++ V + E+LVLDEADRLLD
Sbjct: 150 LLLGGTTTPAQDLSVFLKRSPNLLISTPGRLLELLSSPHVHCPQSSFEVLVLDEADRLLD 209
Query: 91 MGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVR-----AESK--- 142
+GF+ + I++RLPK RRTGLFSA+ +EAV+++ + GLRNPV++ V+ AE K
Sbjct: 210 LGFKDDLQKILARLPKQRRTGLFSASVSEAVDQIVRVGLRNPVKIAVKVRGAGAEDKRTP 269
Query: 143 ------------SHHVSASSQQLAS-SKTP 159
SH + A S+ L+S S TP
Sbjct: 270 ASLQMTYLATRPSHRIPALSKLLSSISPTP 299
>gi|223590191|sp|A5DLF4.2|DBP4_PICGU RecName: Full=ATP-dependent RNA helicase DBP4
gi|190347685|gb|EDK40007.2| hypothetical protein PGUG_04105 [Meyerozyma guilliermondii ATCC
6260]
Length = 754
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 102/168 (60%), Gaps = 4/168 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+SPTREL+ Q + V I + L+ GG +VK + ++I N+LIGTPGR
Sbjct: 121 ALIVSPTRELAVQTFEVLTK-IGKYNSFSAGLVTGGKDVKYEKERISR--MNILIGTPGR 177
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ + ++ NL++LVLDEADR LDMGF+KQI I+ LP R+T LFSATQ++ V
Sbjct: 178 ISQHLNEAVGMETSNLQVLVLDEADRCLDMGFRKQIDNILGHLPVTRQTLLFSATQSDNV 237
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWN 169
++L++ L NP RV V ++ + + S +Q K L ++V+W+
Sbjct: 238 KDLARLSLVNPKRVGVSSDQEVSSIPESLEQYY-IKISLASKMDVLWS 284
>gi|281204091|gb|EFA78287.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 837
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 90/136 (66%), Gaps = 3/136 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I++PTREL+ QI+ V + + L++GG +V + KKI N+LI TPGR
Sbjct: 171 AIILAPTRELAIQIFEVLR-IAGKTHSFSAGLIIGGKDVAGEKKKIGT--MNILIATPGR 227
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ D NL++L+LDEADR+LDMGF K ++ IIS LPK R+T LFSATQT+++
Sbjct: 228 LLQHMDETDGFQCSNLQMLILDEADRILDMGFSKSLNAIISNLPKARQTLLFSATQTKSI 287
Query: 122 EELSKAGLRNPVRVEV 137
++L++ L++P + V
Sbjct: 288 KDLARLSLKDPEYISV 303
>gi|170582010|ref|XP_001895938.1| ATP-dependent RNA helicase DDX18 [Brugia malayi]
gi|158596969|gb|EDP35219.1| ATP-dependent RNA helicase DDX18, putative [Brugia malayi]
Length = 547
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 89/136 (65%), Gaps = 2/136 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++ISPTRELS Q Y V ++ P + L++GG +A+ +K+ G + L+ TPGRL
Sbjct: 141 IVISPTRELSMQTYGVLSEILAKHPTLTHGLIMGGANRQAEAQKLAR-GVSFLVATPGRL 199
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++ D +NL+ L++DEADR+LD+GF+ ++ I+ LPK R+T FSATQT V+
Sbjct: 200 LDHLQNTDGFMVKNLKCLIIDEADRILDIGFEIEMQQILRVLPKKRQTMFFSATQTPKVD 259
Query: 123 ELSKAGLR-NPVRVEV 137
EL KA L +PV+V +
Sbjct: 260 ELVKAALHTDPVKVGI 275
>gi|121706092|ref|XP_001271309.1| DEAD/DEAH box helicase (Sbp4), putative [Aspergillus clavatus NRRL
1]
gi|143585827|sp|A1CL59.1|SPB4_ASPCL RecName: Full=ATP-dependent rRNA helicase spb4
gi|119399455|gb|EAW09883.1| DEAD/DEAH box helicase (Sbp4), putative [Aspergillus clavatus NRRL
1]
Length = 639
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 97/168 (57%), Gaps = 26/168 (15%)
Query: 2 GMIISPTRELSSQIYHVAQPFI-------------------------STLPDVKSVLLVG 36
+IISPTREL+SQI+ V Q + STL V +LL G
Sbjct: 90 AIIISPTRELASQIHSVMQSLLAFHPPSAAAMTPLDDDDAPRQKFPSSTLKVVPQLLLGG 149
Query: 37 GVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQK 95
D+ + + N+L+ TPGRL +++ V + E+LVLDEADRLLD+GF++
Sbjct: 150 STTPAEDLSRFLKLSPNVLVSTPGRLLELLSSPHVHCPQSSFEMLVLDEADRLLDLGFKE 209
Query: 96 QISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKS 143
+ I+ RLPK RRTGLFSA+ +EAV+++ + GLRNPV++ V+ + S
Sbjct: 210 TLQNILRRLPKQRRTGLFSASVSEAVDQIVRVGLRNPVKIMVKVKGTS 257
>gi|444914084|ref|ZP_21234229.1| ATP-dependent RNA helicase DbpA [Cystobacter fuscus DSM 2262]
gi|444715018|gb|ELW55891.1| ATP-dependent RNA helicase DbpA [Cystobacter fuscus DSM 2262]
Length = 461
Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 101/157 (64%), Gaps = 6/157 (3%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL +Q+ + LP ++ ++L GG ++ ++ +E+ GA+L +GTPGR+
Sbjct: 73 LVLCPTRELCAQVAGEIRRLGRRLPGLQVLVLAGGQPIRPQIEALEK-GAHLAVGTPGRV 131
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+++R + LD R+L +VLDEADR+LDMGF++ + I+ PK R+T LFSAT +++E
Sbjct: 132 LDLLQR-EALDTRHLATVVLDEADRMLDMGFREDMERILGATPKTRQTVLFSATFPDSIE 190
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTP 159
+S+A ++P RV V A + + QQLA P
Sbjct: 191 AMSRAFQKDPSRVTVEATDAAPDI----QQLAYLCAP 223
>gi|385305559|gb|EIF49524.1| nucleolar dead box rna helicase [Dekkera bruxellensis AWRI1499]
Length = 417
Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ Q Y V I + + L++GG + K + ++I N+L+GTPGR
Sbjct: 118 ALIISPTRELAVQTYEVLLK-IGKYCSLSAGLVIGGKDYKFERERIGR--INILVGTPGR 174
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ M+ L NL++LV DEADR+LDMGF+K I I+S LP R+T LFSATQT++V
Sbjct: 175 ILQHMDESASLKLDNLQMLVFDEADRILDMGFKKTIDSILSELPPERQTMLFSATQTKSV 234
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNV 170
++L++ L NP + A+++S + Q S T L ++++W+
Sbjct: 235 KDLARLSLVNPKYISTSADNESLTPESLDQYYVS--TELYEKVDLLWSF 281
>gi|24642822|ref|NP_573230.1| CG5800 [Drosophila melanogaster]
gi|21429126|gb|AAM50282.1| RE19835p [Drosophila melanogaster]
gi|22832742|gb|AAF48747.2| CG5800 [Drosophila melanogaster]
gi|220948042|gb|ACL86564.1| CG5800-PA [synthetic construct]
Length = 826
Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 97/155 (62%), Gaps = 3/155 (1%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ + + D + L++GG +K + ++++ N+LI TPGR
Sbjct: 147 AIIISPTRELAYQIFETLKK-VGKHHDFSAGLIIGGKNLKFERTRMDQ--CNILICTPGR 203
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + + +E+LVLDEADR LDMGFQK ++ II P +R+T LFSATQT V
Sbjct: 204 LLQHMDENPLFNTSTMEMLVLDEADRCLDMGFQKTLNSIIENFPPVRQTLLFSATQTNTV 263
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASS 156
++L++ L++PV V + SAS+++ ++
Sbjct: 264 QDLARLNLKDPVYVGYGGATPREEPSASTKKTPNT 298
>gi|448122101|ref|XP_004204366.1| Piso0_000207 [Millerozyma farinosa CBS 7064]
gi|358349905|emb|CCE73184.1| Piso0_000207 [Millerozyma farinosa CBS 7064]
Length = 611
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 95/146 (65%), Gaps = 6/146 (4%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPD----VKSVLLVGGVE-VKADVKKIEEEGANLL 55
++++PTREL++QI V + LPD +K+ LL+G + V+ D++ +E +L
Sbjct: 95 FAIVLAPTRELANQIQTVIHGLLKFLPDEQIPIKTQLLIGSLSSVREDIEFFFKERPQIL 154
Query: 56 IGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
+GTPGR+ D V ++E++VLDEAD+LLD F+K+++ ++ +PK RRTGLFSA
Sbjct: 155 VGTPGRMLDFFSNQKV-KTNSVEVVVLDEADKLLDFTFEKEVTTLLRLMPKQRRTGLFSA 213
Query: 116 TQTEAVEELSKAGLRNPVRVEVRAES 141
T + A ++L G+ NPV+V V++ S
Sbjct: 214 TLSSASDKLFSTGITNPVKVSVKSNS 239
>gi|315055719|ref|XP_003177234.1| ATP-dependent rRNA helicase spb4 [Arthroderma gypseum CBS 118893]
gi|311339080|gb|EFQ98282.1| ATP-dependent rRNA helicase spb4 [Arthroderma gypseum CBS 118893]
Length = 656
Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 95/168 (56%), Gaps = 31/168 (18%)
Query: 2 GMIISPTRELSSQIYHV-----------------------------AQPFISTLPDVKSV 32
+I+SPTREL+ QIY V +P+ S+ V
Sbjct: 90 AIIVSPTRELAEQIYTVLLSLLAFHAPSASKLAQLEGKEPQLDPETGKPYRSSTLTVIPQ 149
Query: 33 LLVGGVEVKA-DVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLD 90
LL+GG A D+ + NLLI TPGRL +++ V + E+LVLDEADRLLD
Sbjct: 150 LLLGGTSTPAQDLSIFLKRSPNLLISTPGRLLELLSSPHVHCPQSSFEVLVLDEADRLLD 209
Query: 91 MGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVR 138
+GF+ + I++RLPK RRTGLFSA+ +EAV+++ + GLRNPV++ V+
Sbjct: 210 LGFKDDLQKILARLPKQRRTGLFSASVSEAVDQIVRVGLRNPVKIAVK 257
>gi|320581342|gb|EFW95563.1| Putative nucleolar DEAD box RNA helicase [Ogataea parapolymorpha
DL-1]
Length = 742
Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 106/170 (62%), Gaps = 10/170 (5%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QIY V I + L++GG + + + ++I + N+LIGTPGR
Sbjct: 118 ALIISPTRELAMQIYEVLLK-IGKHHSFSAGLVIGGKDYEFEKERIGK--MNILIGTPGR 174
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M++ L+ NL+ILVLDEADR+LD+GF+K + IIS LP R++ LFSATQT++V
Sbjct: 175 LLQHMDQSATLNLTNLQILVLDEADRILDLGFKKTLDDIISNLPPERQSLLFSATQTKSV 234
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLH--LEVIWN 169
++L++ L NP V S S++ + L S + L L+++W+
Sbjct: 235 QDLARLSLVNPEYVNA-----SSDTSSTPESLEQSYVVIRLQDKLDILWS 279
>gi|398392601|ref|XP_003849760.1| RNA-dependent ATPase [Zymoseptoria tritici IPO323]
gi|339469637|gb|EGP84736.1| hypothetical protein MYCGRDRAFT_101180 [Zymoseptoria tritici
IPO323]
Length = 811
Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 105/186 (56%), Gaps = 12/186 (6%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGA----NLLIG 57
MII+PTREL+ QI+ V + + L++GG ++ EE+ A N+++G
Sbjct: 124 AMIITPTRELAIQIFEVLRKVGGKGHLFAAGLVIGGKSLR------EEQDALARMNIVVG 177
Query: 58 TPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQ 117
TPGRL + + + + NL +LVLDEADR+LDMGFQ+ + I+ LPK R+T LFSATQ
Sbjct: 178 TPGRLLQHLSQTAMFNVDNLRMLVLDEADRILDMGFQRDVDAIVDYLPKERQTMLFSATQ 237
Query: 118 TEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNHH 177
T+ V +L++ L P V V ++S + + Q TPL L+ +W+ Q
Sbjct: 238 TKKVGDLARLSLNEPEYVSVHEAAQS--ATPKTLQQNYVITPLQDKLDTLWSFIQSAKKS 295
Query: 178 NLLICL 183
LLI L
Sbjct: 296 KLLIFL 301
>gi|389623099|ref|XP_003709203.1| ATP-dependent rRNA helicase spb-4 [Magnaporthe oryzae 70-15]
gi|351648732|gb|EHA56591.1| ATP-dependent rRNA helicase spb-4 [Magnaporthe oryzae 70-15]
gi|440474715|gb|ELQ43441.1| ATP-dependent rRNA helicase spb-4 [Magnaporthe oryzae Y34]
gi|440490030|gb|ELQ69626.1| ATP-dependent rRNA helicase spb-4 [Magnaporthe oryzae P131]
Length = 636
Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 94/159 (59%), Gaps = 23/159 (14%)
Query: 2 GMIISPTRELSSQIYHVAQPFIS---------------------TLPDVKSVLLVGG-VE 39
+I+SPTREL++QI+ V IS +P + LLVGG V+
Sbjct: 90 AIIVSPTRELATQIHSVLSSLISFHAPSAEFSSFLKGDEKRPDTIVPVLIPQLLVGGTVK 149
Query: 40 VKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQIS 98
V D+ N+L+GTPGRL +++ V + E+LVLDEADRLLD GFQK++
Sbjct: 150 VAQDLSTFLRLSPNILVGTPGRLSELLSSPYVHTPQSSFEVLVLDEADRLLDQGFQKELQ 209
Query: 99 YIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEV 137
I+ LPK RRTGLFSA+ ++AV EL +AGLRNP R+ V
Sbjct: 210 RILGFLPKQRRTGLFSASVSDAVGELVRAGLRNPQRIAV 248
>gi|332030497|gb|EGI70185.1| Putative ATP-dependent RNA helicase DDX47 [Acromyrmex echinatior]
Length = 448
Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 96/143 (67%), Gaps = 2/143 (1%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+I++PTREL+ QI S++ VK+V+LVGG+++ A I E+ +++I TPG
Sbjct: 88 FALILTPTRELAFQISEQFDALGSSI-GVKTVVLVGGMDMHAQ-GMILEKKPHIIIATPG 145
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D +E + R L+ LV+DEADR+L+M F+ ++ I+ +P+ RRT LFSAT T+
Sbjct: 146 RLVDHLENTKGFNLRQLKFLVMDEADRILNMDFEVEVDKILRVIPRERRTLLFSATMTKK 205
Query: 121 VEELSKAGLRNPVRVEVRAESKS 143
V++L +A LRNPV+VEV + ++
Sbjct: 206 VQKLQRASLRNPVKVEVSTKYQT 228
>gi|384245469|gb|EIE18963.1| DEAD-domain-containing protein, partial [Coccomyxa subellipsoidea
C-169]
Length = 448
Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 90/140 (64%), Gaps = 3/140 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ + + D+ + LL+GG VK + ++ N+L+ TPGR
Sbjct: 75 ALIISPTRELAMQIFEELRK-VGAKHDLSAGLLIGGKNVKEERDRVNS--MNILVATPGR 131
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ D +L++LVLDEADR+LDMGF ++ II LP R+T LFSATQT +V
Sbjct: 132 LLQHMDETPGFDASSLQVLVLDEADRILDMGFSGTVNAIIENLPPQRQTMLFSATQTRSV 191
Query: 122 EELSKAGLRNPVRVEVRAES 141
++L++ LR+P + + AE+
Sbjct: 192 KDLARLSLRDPTYIAIHAEA 211
>gi|170574677|ref|XP_001892915.1| hypothetical protein [Brugia malayi]
gi|158601304|gb|EDP38253.1| conserved hypothetical protein [Brugia malayi]
Length = 520
Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 89/136 (65%), Gaps = 2/136 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++ISPTRELS Q Y V ++ P + L++GG +A+ +K+ G + L+ TPGRL
Sbjct: 141 IVISPTRELSMQTYGVLSEILAKHPTLTHGLIMGGANRQAEAQKLAR-GVSFLVATPGRL 199
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++ D +NL+ L++DEADR+LD+GF+ ++ I+ LPK R+T FSATQT V+
Sbjct: 200 LDHLQNTDGFMVKNLKCLIIDEADRILDIGFEIEMQQILRVLPKKRQTMFFSATQTPKVD 259
Query: 123 ELSKAGLR-NPVRVEV 137
EL KA L +PV+V +
Sbjct: 260 ELVKAALHTDPVKVGI 275
>gi|223634695|sp|A5DGM4.2|SPB4_PICGU RecName: Full=ATP-dependent rRNA helicase SPB4
gi|190346280|gb|EDK38327.2| hypothetical protein PGUG_02425 [Meyerozyma guilliermondii ATCC
6260]
Length = 601
Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 96/156 (61%), Gaps = 9/156 (5%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPD----VKSVLLVGGVE-VKADVKKIEEEGANLLI 56
G++ISPTREL++QI V + P+ +K+ L+VG + V+ D+ E ++I
Sbjct: 91 GIVISPTRELANQINTVFHTLLQFYPEDQPPIKTQLIVGSLATVREDLNAFAENKPQIII 150
Query: 57 GTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
TPGRL D + + +E++VLDEADRLLD+ FQ + I+ +LPK RRTGLFSAT
Sbjct: 151 ATPGRLLDFFSS-NAVKRSTVEMVVLDEADRLLDISFQNDVVSILKKLPKQRRTGLFSAT 209
Query: 117 QTEAVEELSKAGLRNPVRVEV---RAESKSHHVSAS 149
+ A + + + G+ NPV++ V +AESK ++ +
Sbjct: 210 LSSAGDSIFRTGMSNPVKISVNSNKAESKPQSLTVN 245
>gi|357494471|ref|XP_003617524.1| ATP-dependent RNA helicase DBP4 [Medicago truncatula]
gi|355518859|gb|AET00483.1| ATP-dependent RNA helicase DBP4 [Medicago truncatula]
Length = 747
Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 106/172 (61%), Gaps = 14/172 (8%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGAN---LLIGTP 59
+IISPTREL+ QI+ V I + LL+GG DV IE+E N +LI TP
Sbjct: 151 IIISPTRELAGQIFGVLNA-IGEHHRFSAGLLIGG---GGDVA-IEKECVNKLNILICTP 205
Query: 60 GRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTE 119
GRL M+ D +++LVLDEADR+LD GF+K+++ IIS+LPK R+T LFSATQT+
Sbjct: 206 GRLLQHMDETPNFDCSQMQVLVLDEADRILDSGFKKEVNAIISQLPKRRQTMLFSATQTK 265
Query: 120 AVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSK--TPLGLHLEVIWN 169
+V++L++ L++P + V ES V+A+ L + PL L+++W
Sbjct: 266 SVQDLARLSLKDPEYISVHEES----VTATPTLLKQTVMIVPLDQKLDMLWT 313
>gi|367054232|ref|XP_003657494.1| hypothetical protein THITE_2123266 [Thielavia terrestris NRRL 8126]
gi|347004760|gb|AEO71158.1| hypothetical protein THITE_2123266 [Thielavia terrestris NRRL 8126]
Length = 638
Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 105/190 (55%), Gaps = 30/190 (15%)
Query: 2 GMIISPTRELSSQIYHVA-------QPFISTLPDVKS--------------VLLVGGVEV 40
G+IISPTREL+SQIY+V P LP KS LLVGG
Sbjct: 91 GIIISPTRELTSQIYNVLVSLIKFHGPSADLLPYAKSDEKRPATTEPVIVPQLLVGGTTK 150
Query: 41 KA-DVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQIS 98
A D++ NLLIGTPGRL +++ V + E+LV+DEADRLLD+GF ++++
Sbjct: 151 AAEDLRTFLRLSPNLLIGTPGRLAELLSSPYVKAPSSSFEVLVMDEADRLLDLGFSQELT 210
Query: 99 YIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAES-KSHHVSASSQQLASSK 157
I+ LPK RRTGLFSA+ +EAVE L GL P ++ VR +S K V + K
Sbjct: 211 RILGYLPKQRRTGLFSASLSEAVERLITVGLLYPHKITVRVKSLKDGGV------IQERK 264
Query: 158 TPLGLHLEVI 167
TP+ L + +
Sbjct: 265 TPMSLQMSYL 274
>gi|10047265|dbj|BAB13421.1| KIAA1595 protein [Homo sapiens]
Length = 471
Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/137 (50%), Positives = 87/137 (63%), Gaps = 15/137 (10%)
Query: 50 EGANLLIGTPGRLYDIMER-MDVLDF----RNLEILVLDEADRLLDMGFQKQISYIISRL 104
+ N+++ TPGRL D+ R + LD R+L++LVLDEADRLLDMGF+ I+ I+ L
Sbjct: 4 QSGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFL 63
Query: 105 PKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHL 164
PK RRTGLFSATQT+ VE L +AGLRNPVRV V K V+ASS Q KTP L
Sbjct: 64 PKQRRTGLFSATQTQEVENLVRAGLRNPVRVSV----KEKGVAASSAQ----KTP--SRL 113
Query: 165 EVIWNVNQMRNHHNLLI 181
E + V + N L+
Sbjct: 114 ENYYMVCKADEKFNQLV 130
>gi|401827701|ref|XP_003888143.1| ATP-dependent RNA helicase [Encephalitozoon hellem ATCC 50504]
gi|392999343|gb|AFM99162.1| ATP-dependent RNA helicase [Encephalitozoon hellem ATCC 50504]
Length = 459
Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 93/135 (68%), Gaps = 7/135 (5%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++I+PTREL+ QI VA+ F DV +GG+ ++ D +K+E E ++ +GTPGRL
Sbjct: 80 VVITPTRELALQIKEVAELF-----DVSCECFIGGMSIEKDYEKMEGE-FHIAVGTPGRL 133
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+I+ + D+ F + L+LDEAD+LL GF++++ +I + PK R TGLFSAT ++V+
Sbjct: 134 LEIVSK-DIKKFSRIGHLILDEADKLLGFGFEEKLMQLIKKFPKNRVTGLFSATINDSVD 192
Query: 123 ELSKAGLRNPVRVEV 137
+LS+A LRNPV ++V
Sbjct: 193 KLSRASLRNPVSIKV 207
>gi|341614600|ref|ZP_08701469.1| DNA and RNA helicase [Citromicrobium sp. JLT1363]
Length = 459
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 97/147 (65%), Gaps = 4/147 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++Q+ + + D++ LL+GGV++ +K + E G ++LI TPGRL
Sbjct: 76 LILAPTRELAAQVAENFEKY-GKQHDLQLALLIGGVQMGDQIKALNE-GVDVLIATPGRL 133
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ ER +L E+LV+DEADR+LDMGF I I S+LP+ R+T LFSAT +E
Sbjct: 134 MDLFERGKIL-LNGCEMLVIDEADRMLDMGFIPDIETICSKLPEPRQTLLFSATMPPPIE 192
Query: 123 ELSKAGLRNPVRVEV-RAESKSHHVSA 148
+L+ L NP R+EV RA S + +++A
Sbjct: 193 KLAGKFLDNPKRIEVSRAASTNENITA 219
>gi|403418786|emb|CCM05486.1| predicted protein [Fibroporia radiculosa]
Length = 568
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 110/182 (60%), Gaps = 4/182 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ V + I + L++GG + + +++ N+L+ TPGR
Sbjct: 129 ALIISPTRELAVQIFDVLRS-IGGYHSFSAGLVIGGKNLNDERERLSR--MNILVATPGR 185
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M++ + NL++LVLDEADR+LDMGFQ+ +S ++S LPK R+T LFSATQT +V
Sbjct: 186 LLQHMDQTIGFECDNLQMLVLDEADRILDMGFQRTLSALLSHLPKSRQTLLFSATQTNSV 245
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNHHNLLI 181
+L++ L++PV V V+ E S + S + L L+++W+ + + +L+
Sbjct: 246 SDLARLSLKDPVYVGVQ-ELDSAGATPKSLEQHYVVCELDKKLDILWSFIKAHLQNKVLV 304
Query: 182 CL 183
L
Sbjct: 305 FL 306
>gi|258563552|ref|XP_002582521.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237908028|gb|EEP82429.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 650
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 99/173 (57%), Gaps = 31/173 (17%)
Query: 2 GMIISPTRELSSQIYHV--------------AQPF-------ISTLPDVKSV-------- 32
+I+SPTREL+ QIY V QP + LP KS
Sbjct: 89 AIIVSPTRELAEQIYKVLLSLLAFHPPSAAAIQPANPDGTEDSTNLPIPKSSSTLKVVPQ 148
Query: 33 LLVGGVEVKA-DVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLD 90
LL+GG A D+ + NLL+ TPGRL ++++ V + E+LVLDEADRLLD
Sbjct: 149 LLLGGTTTPAQDLSAFLKHSPNLLVSTPGRLLELLKSPHVHCPQTSFEVLVLDEADRLLD 208
Query: 91 MGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKS 143
+GF+ + I++RLPK RRTGLFSAT ++AV+++ + GLRNPV++ V+ + S
Sbjct: 209 LGFKDDLQKILARLPKQRRTGLFSATVSDAVDQIIRVGLRNPVKIAVKVKGAS 261
>gi|156377720|ref|XP_001630794.1| predicted protein [Nematostella vectensis]
gi|156217822|gb|EDO38731.1| predicted protein [Nematostella vectensis]
Length = 495
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 95/136 (69%), Gaps = 3/136 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTRELS Q Y VA+ + + +++GGV KA+ +++++ G NLLI TPGRL
Sbjct: 77 IIISPTRELSLQTYGVARDLLKH-HNFTYGIIMGGVNRKAEAERLQK-GVNLLIATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++ ++NL+ LV+DEADR+L++GF++++ II LP R+T LFSATQT+ VE
Sbjct: 135 LDHLQNTQGFLYKNLQCLVIDEADRILEIGFEEEMRQIIRILPSKRQTVLFSATQTKNVE 194
Query: 123 ELSKAGL-RNPVRVEV 137
+L+K L R+P+ V V
Sbjct: 195 DLAKLSLKRSPLYVGV 210
>gi|254573064|ref|XP_002493641.1| Putative nucleolar DEAD box RNA helicase [Komagataella pastoris
GS115]
gi|238033440|emb|CAY71462.1| Putative nucleolar DEAD box RNA helicase [Komagataella pastoris
GS115]
gi|328354532|emb|CCA40929.1| RNA Helicase [Komagataella pastoris CBS 7435]
Length = 766
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 89/131 (67%), Gaps = 3/131 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QIY V I L++GG + K + ++I + N+LIGTPGR
Sbjct: 117 ALIISPTRELAMQIYEVLLN-IGKHSSFSCGLVIGGKDFKYESERIGK--INVLIGTPGR 173
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M++ L+ NL++L+LDEADR+LDMGF+K + IIS +P R+T LFSATQT++V
Sbjct: 174 LLQHMDQSANLNINNLQMLILDEADRILDMGFKKTLDSIISSIPPQRQTLLFSATQTKSV 233
Query: 122 EELSKAGLRNP 132
++L++ L NP
Sbjct: 234 QDLARLSLTNP 244
>gi|154320684|ref|XP_001559658.1| hypothetical protein BC1G_01814 [Botryotinia fuckeliana B05.10]
gi|160358675|sp|A6RMZ2.1|SPB4_BOTFB RecName: Full=ATP-dependent rRNA helicase spb4
gi|347838955|emb|CCD53527.1| similar to ATP-dependent rRNA helicase spb4 [Botryotinia
fuckeliana]
Length = 626
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 103/183 (56%), Gaps = 25/183 (13%)
Query: 2 GMIISPTRELSSQIYHVA--------------QPF--------ISTLPDVKSVLLVGGVE 39
+I+SPTREL++QI+ V QP STL + +LL G
Sbjct: 90 AIIVSPTRELATQIHSVLTSLLKFHEPSAEALQPLEEGEKRKPSSTLRVIPQLLLGGTTT 149
Query: 40 VKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQIS 98
D+ + + NLLI TPGRL +++ V + E+LVLDEADRLLD+GF+ +
Sbjct: 150 PAQDLSRFLKNSPNLLISTPGRLLELLSSPHVHCPQSSFEVLVLDEADRLLDLGFKDDLQ 209
Query: 99 YIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVR--VEVRAESKSHHVSASSQQLASS 156
I+ RLPK RRTGLFSA+ +EAV E+ + GLRNPV+ V+V+ ++ +S Q++
Sbjct: 210 KILGRLPKQRRTGLFSASVSEAVGEIVRVGLRNPVKIAVKVKGAGGGDKMTPASLQMSYL 269
Query: 157 KTP 159
TP
Sbjct: 270 LTP 272
>gi|378727046|gb|EHY53505.1| ATP-dependent rRNA helicase spb4 [Exophiala dermatitidis
NIH/UT8656]
Length = 651
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 96/173 (55%), Gaps = 36/173 (20%)
Query: 2 GMIISPTRELSSQIYHV--------------------------------AQPFI---STL 26
+IISPTREL+SQIY+V QP STL
Sbjct: 98 AIIISPTRELASQIYNVLISLLDFHAPSAAARRKALGLDDNETHANEEETQPPTFPPSTL 157
Query: 27 PDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEA 85
+ +LL G D+ + NLL+ TPGRL +I+ V + E+LVLDEA
Sbjct: 158 TVIPQLLLGGATTPAQDLSTFLKTSPNLLVSTPGRLLEILSSPYVHCPQSSFEVLVLDEA 217
Query: 86 DRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVR 138
DRLLD+GF++ ++ I+S LPK RRTGLFSA+ +EAV+++ + GLRNPV++ V+
Sbjct: 218 DRLLDLGFKEDLTKILSLLPKQRRTGLFSASVSEAVDQIIRVGLRNPVKIAVK 270
>gi|345563537|gb|EGX46537.1| hypothetical protein AOL_s00109g109 [Arthrobotrys oligospora ATCC
24927]
Length = 633
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 103/186 (55%), Gaps = 20/186 (10%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLP----------------DVKSVLLVGGVEV--KAD 43
G+IISPTREL++QI+ V + + P ++ LLVGG + D
Sbjct: 100 GIIISPTRELATQIHGVCEGLLKFWPVTEGGDGDEGSSVVPCPIRPQLLVGGSNTTPQKD 159
Query: 44 VKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISR 103
+K NL+I TPGRL D+++ D + + ++LVLDEADRLLD+GF++ + I++R
Sbjct: 160 LKLFLSTSTNLIIATPGRLNDLLQS-DYVRTSSFDVLVLDEADRLLDLGFKETLMKILAR 218
Query: 104 LPKLRRTGLFSATQTEAVEE-LSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGL 162
LPK RRTGLFSA+ T+AVE + G+RN VR+ V+ + L P+
Sbjct: 219 LPKQRRTGLFSASVTDAVEGVMGWVGVRNGVRINVKVRDHKDEEKRTPVSLDIGYIPVQA 278
Query: 163 HLEVIW 168
++ W
Sbjct: 279 SEKLFW 284
>gi|390943409|ref|YP_006407170.1| DNA/RNA helicase [Belliella baltica DSM 15883]
gi|390416837|gb|AFL84415.1| DNA/RNA helicase, superfamily II [Belliella baltica DSM 15883]
Length = 376
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 103/161 (63%), Gaps = 6/161 (3%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLP-DVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II PTREL++Q+ V + F L VKS + GGV + + K+ G ++L+ TPGR
Sbjct: 77 LIIVPTRELAAQVEEVIRTFSQFLSRKVKSQAVFGGVSINPQMMKLN--GTDILVATPGR 134
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D++ + + + +L+ LVLDEAD++L++GF++++ I+SRLPK R+ LFSAT+ EA+
Sbjct: 135 LLDLLSK-NAISISDLQTLVLDEADKVLNLGFKEEVDEILSRLPKNRQNILFSATKEEAI 193
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLAS--SKTPL 160
E L L+NP+++E++ E + + S L S K PL
Sbjct: 194 EGLIAKLLKNPIKIEIKPEEITPDLIDQSAYLVSQEKKGPL 234
>gi|255956657|ref|XP_002569081.1| Pc21g20950 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590792|emb|CAP96992.1| Pc21g20950 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 805
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 104/168 (61%), Gaps = 5/168 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+++SPTREL+ QI+ V + I + + L++GG ++ + ++ N+LI TPGR
Sbjct: 121 ALVLSPTRELAIQIFEVLRK-IGRYHNFSAGLIIGGKSLREEQDRLGR--MNILICTPGR 177
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ +++ + + NL++LVLDEADR++DMGFQK + II LPK R+T LFSATQT+ V
Sbjct: 178 MLQHLDQTAMFETNNLQMLVLDEADRIMDMGFQKTVDAIIDHLPKQRQTMLFSATQTKKV 237
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWN 169
+L++ L+ P V V + S + S+ Q + TPL L+ +W+
Sbjct: 238 GDLARLSLQEPEYVSVHEAAAS--ATPSTLQQHYTITPLPQKLDTLWS 283
>gi|167625028|ref|YP_001675322.1| DEAD/DEAH box helicase [Shewanella halifaxensis HAW-EB4]
gi|167355050|gb|ABZ77663.1| DEAD/DEAH box helicase domain protein [Shewanella halifaxensis
HAW-EB4]
Length = 437
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 108/168 (64%), Gaps = 13/168 (7%)
Query: 3 MIISPTRELSSQI-YHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++++PTREL+ Q+ +V+Q ++T DV S+++ GGV + A K+ G ++++ TPGR
Sbjct: 105 LVLAPTRELAVQVNTNVSQYAVNT--DVSSIVIYGGVSIDAQATKLAA-GVDVIVATPGR 161
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D + R L+ ++E LV DEADR+LDMGF +I+ I+ +LP R+T LFSAT + A+
Sbjct: 162 LLDHVRR-GTLNLSDIEYLVFDEADRMLDMGFMDEINAILKQLPAKRQTLLFSATFSSAI 220
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQL-----ASSKTPLGLHL 164
ELSK L+ P+R+EV K++ + S +Q+ + KT L HL
Sbjct: 221 FELSKKLLQKPLRIEV---DKANSAANSIEQVVYAVDSERKTELLCHL 265
>gi|409083067|gb|EKM83424.1| hypothetical protein AGABI1DRAFT_110091 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 513
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 100/151 (66%), Gaps = 4/151 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ QI+ VA+ ++ +++ GG +A+ K+ + G NLL+ TPGRL
Sbjct: 54 IIISPTRELALQIFGVAKDLMAHHSQTFGIIM-GGANRRAEADKLVK-GVNLLVATPGRL 111
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP-KLRRTGLFSATQTEAV 121
D +E FRNL+ LV+DEADR+L++GF++++ IIS LP + R++ LFSATQT V
Sbjct: 112 LDHLENTKGFIFRNLKALVIDEADRILEIGFEEEMKKIISILPNEDRQSMLFSATQTTKV 171
Query: 122 EELSKAGLR-NPVRVEVRAESKSHHVSASSQ 151
++L++ LR PV V+V E + VS SQ
Sbjct: 172 QDLARVSLRPGPVYVDVDKEEATSTVSTLSQ 202
>gi|395333659|gb|EJF66036.1| DEAD-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 679
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 106/185 (57%), Gaps = 29/185 (15%)
Query: 2 GMIISPTRELSSQIYHVAQPFIST-----------------------LPDVKSVLLVGGV 38
++ISPTREL++QI+ + F+ + P+ LL+
Sbjct: 87 ALVISPTRELATQIHSIFSLFLDSQPSPRRPSPPPDEASGSDVQLDVTPEYPPPLLIVSS 146
Query: 39 EVKA--DVKKIEEEGANLLIGTPGRLYDIM--ERMDVLDFRNLEILVLDEADRLLDMGFQ 94
+ DV++ GA+++IGTPGR+ + + + +++ + LE+LVLDEADRLLD+GFQ
Sbjct: 147 DSPPAQDVQRFLSTGADIVIGTPGRVEEFLLGKGRNIVSVKELEVLVLDEADRLLDLGFQ 206
Query: 95 KQISYIISRLPKLRRTGLFSATQT--EAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQ 152
++ I++ LPK RRTGLFSAT T +A+ EL + GLRNP R+ V+ ++K A +
Sbjct: 207 AALTRILTALPKQRRTGLFSATMTDADALSELVRVGLRNPARIVVKVQTKKTKGRAGADG 266
Query: 153 LASSK 157
+ + K
Sbjct: 267 IKADK 271
>gi|302697571|ref|XP_003038464.1| hypothetical protein SCHCODRAFT_46575 [Schizophyllum commune H4-8]
gi|300112161|gb|EFJ03562.1| hypothetical protein SCHCODRAFT_46575 [Schizophyllum commune H4-8]
Length = 528
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 103/151 (68%), Gaps = 4/151 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+II+PTREL+ QI+ VA+ ++ +++ GG +A+++K+++ G NLLI TPGRL
Sbjct: 89 IIITPTRELALQIFGVAKDLMAHHSQTYGIVM-GGANRRAEMEKLQK-GVNLLIATPGRL 146
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP-KLRRTGLFSATQTEAV 121
D ++ FRNL+ LV+DEADR+L++GF++++ IIS LP + R++ LFSATQT V
Sbjct: 147 LDHLQNSKGFVFRNLKALVIDEADRILEVGFEEEMKRIISILPNENRQSMLFSATQTTKV 206
Query: 122 EELSKAGLR-NPVRVEVRAESKSHHVSASSQ 151
++L++ LR PV ++V E + VS SQ
Sbjct: 207 QDLARISLRPGPVSIDVDKEEATSTVSTLSQ 237
>gi|347965054|ref|XP_001230842.3| AGAP001057-PA [Anopheles gambiae str. PEST]
gi|333467670|gb|EAU77138.3| AGAP001057-PA [Anopheles gambiae str. PEST]
Length = 761
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 86/134 (64%), Gaps = 3/134 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QIY + D LL+GG +K + ++ N++IGTPGR
Sbjct: 154 ALIITPTRELAVQIYETMTQ-VGRHHDFTIGLLIGGQNLKYERNRLH--NLNIIIGTPGR 210
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M++ + D NL+ILVLDEADR LDMGF + II LP++R+T LFSATQT +V
Sbjct: 211 LLQHMDQNPLFDTTNLKILVLDEADRCLDMGFSATMDSIIENLPEVRQTVLFSATQTNSV 270
Query: 122 EELSKAGLRNPVRV 135
+L++ L NPV++
Sbjct: 271 RDLARVKLVNPVQI 284
>gi|310795696|gb|EFQ31157.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 635
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 96/164 (58%), Gaps = 23/164 (14%)
Query: 1 MGMIISPTRELSSQIYHVAQ-------------PFI--------STLPDVKSVLLVGGVE 39
+I+SPTREL+ QI+ V Q PF+ +++P + LLVGG
Sbjct: 90 FSIIVSPTRELAIQIHAVLQSLVGFHPPSAEILPFLKEDEKRPDASVPVIVPQLLVGGTT 149
Query: 40 V-KADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQI 97
+ D+ N+L+ TPGRL +++ V + E+LVLDEADRLLDMGF++ I
Sbjct: 150 TTQQDLSFFVRHAPNVLVSTPGRLVELLASPHVRCTQSSFELLVLDEADRLLDMGFKQDI 209
Query: 98 SYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAES 141
I+ LPK RRTGLFSA+ +EAV ++ GLRNPV++ VR +S
Sbjct: 210 QRILGYLPKQRRTGLFSASVSEAVSQIITVGLRNPVKIAVRVKS 253
>gi|68490068|ref|XP_711155.1| potential SPB4-like DEAD box RNA helicase [Candida albicans SC5314]
gi|68490105|ref|XP_711137.1| potential SPB4-like DEAD box RNA helicase [Candida albicans SC5314]
gi|74656094|sp|Q59N29.1|SPB41_CANAL RecName: Full=ATP-dependent rRNA helicase SPB41
gi|46432415|gb|EAK91898.1| potential SPB4-like DEAD box RNA helicase [Candida albicans SC5314]
gi|46432434|gb|EAK91916.1| potential SPB4-like DEAD box RNA helicase [Candida albicans SC5314]
Length = 631
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 97/159 (61%), Gaps = 6/159 (3%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSV-----LLVGGV-EVKADVKKIEEEGANL 54
+ +++SPTREL++QI V + LP+ K LLVG + V+ D+ + +
Sbjct: 95 LSIVLSPTRELANQIQSVFNQVLQYLPEDKGTRINTQLLVGSIGNVREDLNQFLTNQPQI 154
Query: 55 LIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFS 114
LIGTPGR+ + + + +LEI++LDEAD+LLD F+K + I+ +LPK RRTGLFS
Sbjct: 155 LIGTPGRILEFLGSSQSIKTSSLEIVILDEADKLLDFSFEKDVINILKKLPKQRRTGLFS 214
Query: 115 ATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQL 153
AT + A + + G+ NPV+V+V++++ S S + L
Sbjct: 215 ATISSAGNTIFRTGMNNPVKVQVKSKNYFGEQSNSPKSL 253
>gi|238882563|gb|EEQ46201.1| ATP-dependent rRNA helicase SPB4 [Candida albicans WO-1]
Length = 631
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 97/159 (61%), Gaps = 6/159 (3%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSV-----LLVGGV-EVKADVKKIEEEGANL 54
+ +++SPTREL++QI V + LP+ K LLVG + V+ D+ + +
Sbjct: 95 LSIVLSPTRELANQIQSVFNQVLQYLPEDKGTRINTQLLVGSIGNVREDLNQFLTNQPQI 154
Query: 55 LIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFS 114
LIGTPGR+ + + + +LEI++LDEAD+LLD F+K + I+ +LPK RRTGLFS
Sbjct: 155 LIGTPGRILEFLGSSQSIKTSSLEIVILDEADKLLDFSFEKDVINILKKLPKQRRTGLFS 214
Query: 115 ATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQL 153
AT + A + + G+ NPV+V+V++++ S S + L
Sbjct: 215 ATISSAGNTIFRTGMNNPVKVQVKSKNYFGEQSNSPKSL 253
>gi|290977230|ref|XP_002671341.1| predicted protein [Naegleria gruberi]
gi|284084909|gb|EFC38597.1| predicted protein [Naegleria gruberi]
Length = 620
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 101/170 (59%), Gaps = 19/170 (11%)
Query: 2 GMIISPTRELSSQIYHVAQPFI-STLPDVKSVLLVGGVEVKA-----DVKKIEEEG---- 51
+++ PTREL+ Q+Y VA F T +VK L +GG E + E+ G
Sbjct: 64 SIVLLPTRELARQVYDVACKFAPKTNLNVK--LFIGGEERETLQPATGFDSSEKSGLNAS 121
Query: 52 ------ANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP 105
N+ IGTPGR+ D + +L R LEIL++DEAD +L+MGF++Q+ I+S LP
Sbjct: 122 ENLFLDCNIAIGTPGRILDYLNS-KLLKVRCLEILIIDEADIILNMGFRQQVDQILSHLP 180
Query: 106 KLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLAS 155
K RRTGLFSATQT +++L ++GLRNP++V +++ + QLA+
Sbjct: 181 KQRRTGLFSATQTSELDDLVRSGLRNPMKVAASEHAENKKKATVPSQLAN 230
>gi|225460999|ref|XP_002278373.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 32 [Vitis vinifera]
Length = 750
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 107/168 (63%), Gaps = 6/168 (3%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGG-VEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ Q++ V + + + LL+GG +V + + + E N+L+ TPGR
Sbjct: 146 IIISPTRELTGQLFDVLKS-VGKYHSFSAGLLIGGRKDVGMEKEHVNE--LNILVCTPGR 202
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ D L++LVLDEADR+LD+GF+K ++ IIS+LPK R+T LFSATQT++V
Sbjct: 203 LLQHMDETPNFDCSQLQVLVLDEADRILDVGFKKALNAIISQLPKHRQTLLFSATQTKSV 262
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWN 169
++L++ L++P + V ES + + + Q + PL L+++W+
Sbjct: 263 QDLARLSLKDPEYLSVHEESAT--ATPNRLQQTAMIVPLDQKLDMLWS 308
>gi|68489575|ref|XP_711406.1| potential SPB4-like DEAD box RNA helicase [Candida albicans SC5314]
gi|68489673|ref|XP_711358.1| potential SPB4-like DEAD box RNA helicase [Candida albicans SC5314]
gi|74656107|sp|Q59NP8.1|SPB42_CANAL RecName: Full=ATP-dependent rRNA helicase SPB42
gi|46432654|gb|EAK92127.1| potential SPB4-like DEAD box RNA helicase [Candida albicans SC5314]
gi|46432705|gb|EAK92176.1| potential SPB4-like DEAD box RNA helicase [Candida albicans SC5314]
Length = 631
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 97/159 (61%), Gaps = 6/159 (3%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSV-----LLVGGV-EVKADVKKIEEEGANL 54
+ +++SPTREL++QI V + LP+ K LLVG + V+ D+ + +
Sbjct: 95 LSIVLSPTRELANQIQSVFNQVLQYLPEDKGTRINTQLLVGSIGNVREDLNQFLTNQPQI 154
Query: 55 LIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFS 114
LIGTPGR+ + + + +LEI++LDEAD+LLD F+K + I+ +LPK RRTGLFS
Sbjct: 155 LIGTPGRILEFLGSSQSIKTSSLEIVILDEADKLLDFSFEKDVINILKKLPKQRRTGLFS 214
Query: 115 ATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQL 153
AT + A + + G+ NPV+V+V++++ S S + L
Sbjct: 215 ATISSAGNTIFRTGMNNPVKVQVKSKNYFGEQSNSPKSL 253
>gi|388581859|gb|EIM22166.1| DEAD-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 419
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 88/138 (63%), Gaps = 5/138 (3%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++I+PTREL+ Q Y I L +S+ L GGV + I++ +++GTPGRL
Sbjct: 85 LVIAPTRELAVQTYD----NIDKLNITQSICLYGGVSKDEQKRTIKKNKPRVIVGTPGRL 140
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ V DF N++ LVLDEADR+LD GF+K I+ IIS+ PK R+T +FSAT ++V
Sbjct: 141 LDLANDGGV-DFSNVKYLVLDEADRMLDQGFEKDITAIISKTPKERQTAMFSATWPQSVR 199
Query: 123 ELSKAGLRNPVRVEVRAE 140
L+ +++PVRV V +E
Sbjct: 200 ALAATFMKDPVRVTVGSE 217
>gi|91077478|ref|XP_968425.1| PREDICTED: similar to CG5800 CG5800-PA [Tribolium castaneum]
gi|270002829|gb|EEZ99276.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Tribolium castaneum]
Length = 770
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 108/175 (61%), Gaps = 7/175 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++I+PTREL+ QI+ + + + + L++GG ++K + ++++ N++IGTPGR
Sbjct: 126 ALVITPTRELAYQIFEELRR-VGEHHEFSAGLIIGGKDLKFERNRMDQ--CNIVIGTPGR 182
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ M+ + D N+EILVLDEADR LDMGF++ ++ I++ LP R+T LFSATQT++V
Sbjct: 183 ILQHMDENPLFDCVNMEILVLDEADRCLDMGFEQTMNAIVANLPAKRQTLLFSATQTKSV 242
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
+L++ L+NP V V S + + Q + L + ++W+ ++NH
Sbjct: 243 RDLARLSLKNPAYVSVHEH--SEYSTPKGLQQSYVVCELKDKVSILWSF--IKNH 293
>gi|402590069|gb|EJW84000.1| DEAD box polypeptide 18 [Wuchereria bancrofti]
Length = 548
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 89/136 (65%), Gaps = 2/136 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++ISPTRELS Q Y V ++ P + L++GG +A+ +K+ G + L+ TPGRL
Sbjct: 142 IVISPTRELSMQTYGVLSEILAKHPTLTHGLIMGGANRQAETQKLAR-GVSFLVATPGRL 200
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++ D +NL+ L++DEADR+LD+GF+ ++ I+ LP+ R+T FSATQT V+
Sbjct: 201 LDHLQNTDDFMVKNLKCLIIDEADRILDIGFEIEMQQILRMLPRKRQTMFFSATQTPKVD 260
Query: 123 ELSKAGLR-NPVRVEV 137
EL KA L +PV+V +
Sbjct: 261 ELIKAALHTDPVKVGI 276
>gi|426201882|gb|EKV51805.1| hypothetical protein AGABI2DRAFT_190015 [Agaricus bisporus var.
bisporus H97]
Length = 513
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 100/151 (66%), Gaps = 4/151 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ QI+ VA+ ++ +++ GG +A+ K+ + G NLL+ TPGRL
Sbjct: 54 IIISPTRELALQIFGVAKDLMAHHSQTFGIIM-GGANRRAEADKLVK-GVNLLVATPGRL 111
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP-KLRRTGLFSATQTEAV 121
D +E FRNL+ LV+DEADR+L++GF++++ IIS LP + R++ LFSATQT V
Sbjct: 112 LDHLENTKGFIFRNLKALVIDEADRILEIGFEEEMKKIISILPNEDRQSMLFSATQTTKV 171
Query: 122 EELSKAGLR-NPVRVEVRAESKSHHVSASSQ 151
++L++ LR PV V+V E + VS SQ
Sbjct: 172 QDLARMSLRPGPVYVDVDKEEATSTVSTLSQ 202
>gi|14318521|ref|NP_116654.1| Spb4p [Saccharomyces cerevisiae S288c]
gi|134787|sp|P25808.1|SPB4_YEAST RecName: Full=ATP-dependent rRNA helicase SPB4; AltName:
Full=Suppressor of PAB1 protein 4
gi|160358678|sp|A7A237.1|SPB4_YEAS7 RecName: Full=ATP-dependent rRNA helicase SPB4; AltName:
Full=Suppressor of PAB1 protein 4
gi|4522|emb|CAA34272.1| unnamed protein product [Saccharomyces cerevisiae]
gi|836754|dbj|BAA09238.1| rRNA helicase [Saccharomyces cerevisiae]
gi|151940761|gb|EDN59148.1| ATP-dependent RNA helicase [Saccharomyces cerevisiae YJM789]
gi|285811894|tpg|DAA12439.1| TPA: Spb4p [Saccharomyces cerevisiae S288c]
Length = 606
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 88/148 (59%), Gaps = 7/148 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPD----VKSVLLVGGVE--VKADVKKIEEEGANLL 55
+II+PTRELS QI V F+ P +K LLVG E V+ DV +L
Sbjct: 86 SLIIAPTRELSRQIESVVLSFLEHYPSDLFPIKCQLLVGTNEATVRDDVSNFLRNRPQIL 145
Query: 56 IGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
IGTPGR+ D ++ M + ++V+DEADRLLDM F K I+ LPK RRTGLFSA
Sbjct: 146 IGTPGRVLDFLQ-MPAVKTSACSMVVMDEADRLLDMSFIKDTEKILRLLPKQRRTGLFSA 204
Query: 116 TQTEAVEELSKAGLRNPVRVEVRAESKS 143
T A ++ K GLRNPVR+ V +++++
Sbjct: 205 TMRSAGSDIFKTGLRNPVRITVNSKNQA 232
>gi|296806541|ref|XP_002844080.1| ATP-dependent RNA helicase DBP4 [Arthroderma otae CBS 113480]
gi|238845382|gb|EEQ35044.1| ATP-dependent RNA helicase DBP4 [Arthroderma otae CBS 113480]
Length = 803
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 102/168 (60%), Gaps = 5/168 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ V + I + L++GG ++ + +++ N+L+ TPGR
Sbjct: 125 ALIISPTRELAIQIFEVLRK-IGRYHTFSAGLVIGGKSLQEEQERLGR--MNILVCTPGR 181
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ M++ D N+++LVLDEADR++DMGFQ + I+ LPK R+T LFSATQT+ V
Sbjct: 182 MLQHMDQTAAFDTDNIQMLVLDEADRIMDMGFQSTVDAIVEHLPKERQTMLFSATQTKKV 241
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWN 169
+L++ LR+P + V + S + S+ Q TPL L+ +W+
Sbjct: 242 SDLARLSLRDPEYISVHEAASS--ATPSTLQQHYVVTPLPDKLDTLWS 287
>gi|349577914|dbj|GAA23081.1| K7_Spb4p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392299669|gb|EIW10762.1| Spb4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 606
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 88/148 (59%), Gaps = 7/148 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPD----VKSVLLVGGVE--VKADVKKIEEEGANLL 55
+II+PTRELS QI V F+ P +K LLVG E V+ DV +L
Sbjct: 86 SLIIAPTRELSRQIESVVLSFLEHYPSDLFPIKCQLLVGTNEATVRDDVSNFLRNRPQIL 145
Query: 56 IGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
IGTPGR+ D ++ M + ++V+DEADRLLDM F K I+ LPK RRTGLFSA
Sbjct: 146 IGTPGRVLDFLQ-MPAVKTSACSMVVMDEADRLLDMSFIKDTEKILRLLPKQRRTGLFSA 204
Query: 116 TQTEAVEELSKAGLRNPVRVEVRAESKS 143
T A ++ K GLRNPVR+ V +++++
Sbjct: 205 TMRSAGSDIFKTGLRNPVRITVNSKNQA 232
>gi|323333724|gb|EGA75116.1| Spb4p [Saccharomyces cerevisiae AWRI796]
Length = 606
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 88/148 (59%), Gaps = 7/148 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPD----VKSVLLVGGVE--VKADVKKIEEEGANLL 55
+II+PTRELS QI V F+ P +K LLVG E V+ DV +L
Sbjct: 86 SLIIAPTRELSRQIESVVLSFLEHYPSDLFPIKCQLLVGTNEATVRDDVSNFLRNRPQIL 145
Query: 56 IGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
IGTPGR+ D ++ M + ++V+DEADRLLDM F K I+ LPK RRTGLFSA
Sbjct: 146 IGTPGRVLDFLQ-MPAVKTSACSMVVMDEADRLLDMSFIKDTEKILRLLPKQRRTGLFSA 204
Query: 116 TQTEAVEELSKAGLRNPVRVEVRAESKS 143
T A ++ K GLRNPVR+ V +++++
Sbjct: 205 TMRSAGSDIFKTGLRNPVRITVNSKNQA 232
>gi|442570040|sp|Q1E1R7.2|SPB4_COCIM RecName: Full=ATP-dependent rRNA helicase SPB4
gi|392870773|gb|EAS32606.2| ATP-dependent rRNA helicase SPB4 [Coccidioides immitis RS]
Length = 653
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 94/168 (55%), Gaps = 31/168 (18%)
Query: 2 GMIISPTRELSSQIYHV--------------AQPFIS--------TLPDVKSV------- 32
+I+SPTREL+ QIY V QP S TLP S
Sbjct: 93 AIIVSPTRELAEQIYKVLLSLLAFHAPSAAAIQPSTSDETADGETTLPSYPSSTLKVVPQ 152
Query: 33 LLVGGVEVKA-DVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLD 90
LL+GG A D+ + NL + TPGRL +++ V + E+LVLDEADRLLD
Sbjct: 153 LLLGGATTPAQDLSTFLKRSPNLFVSTPGRLLELLSSPHVHCPQTSFEVLVLDEADRLLD 212
Query: 91 MGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVR 138
+GF+ + ++RLPK RRTGLFSAT ++AV+++ + GLRNPV++ V+
Sbjct: 213 LGFKDDLQKTLARLPKQRRTGLFSATVSDAVDQIIRVGLRNPVKIAVK 260
>gi|440639047|gb|ELR08966.1| hypothetical protein GMDG_00584 [Geomyces destructans 20631-21]
Length = 527
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 93/150 (62%), Gaps = 3/150 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++SPTREL+ Q++ VA+ + T +++ GG A+ K+ G NLLI TPGRL
Sbjct: 133 IVVSPTRELALQMFGVAREIMGTHSQTCGIVM-GGANRSAEATKLAT-GINLLIATPGRL 190
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++ ++NL +LV+DEADR+LD GF+ ++ I+ LP+ R+T LFSATQT VE
Sbjct: 191 LDHLQNTKGFVYKNLRMLVIDEADRILDAGFEDEMRAIVKILPESRQTALFSATQTTKVE 250
Query: 123 ELSKAGLR-NPVRVEVRAESKSHHVSASSQ 151
+L++ LR P+ V V E+K V Q
Sbjct: 251 DLARVSLRPGPLYVNVEEETKHSTVEGLEQ 280
>gi|50293509|ref|XP_449166.1| hypothetical protein [Candida glabrata CBS 138]
gi|74661072|sp|Q6FKS8.1|SPB4_CANGA RecName: Full=ATP-dependent rRNA helicase SPB4
gi|49528479|emb|CAG62136.1| unnamed protein product [Candida glabrata]
Length = 617
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 95/148 (64%), Gaps = 7/148 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPD----VKSVLLVGGVE--VKADVKKIEEEGANLL 55
+I++PTRELS QI +V F+ P+ ++S L+VG E V+ DV + +E +L
Sbjct: 86 SLILAPTRELSMQIQNVVSSFLEHYPEDQYPIRSQLVVGTNEKSVRDDVNTLLDERPQIL 145
Query: 56 IGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
IGTPGR+ D ++ V + ++VLDEADRLLD+ F K + I++ LPK RRTGLFSA
Sbjct: 146 IGTPGRVLDFLQSPSV-KTSSCGMVVLDEADRLLDVSFFKDVEKILNVLPKQRRTGLFSA 204
Query: 116 TQTEAVEELSKAGLRNPVRVEVRAESKS 143
T + A + K GLRNPV++ V ++ K+
Sbjct: 205 TISSAGTLIFKTGLRNPVKITVNSQGKN 232
>gi|365765841|gb|EHN07346.1| Spb4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 606
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 88/148 (59%), Gaps = 7/148 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPD----VKSVLLVGGVE--VKADVKKIEEEGANLL 55
+II+PTRELS QI V F+ P +K LLVG E V+ DV +L
Sbjct: 86 SLIIAPTRELSRQIESVVLSFLEHYPSDLFPIKCQLLVGTNEATVRDDVSNFLRNRPQIL 145
Query: 56 IGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
IGTPGR+ D ++ M + ++V+DEADRLLDM F K I+ LPK RRTGLFSA
Sbjct: 146 IGTPGRVLDFLQ-MPAVKTSACSMVVMDEADRLLDMSFIKDTEKILRLLPKQRRTGLFSA 204
Query: 116 TQTEAVEELSKAGLRNPVRVEVRAESKS 143
T A ++ K GLRNPVR+ V +++++
Sbjct: 205 TMRSAGSDIFKTGLRNPVRITVNSKNQA 232
>gi|256268858|gb|EEU04210.1| Spb4p [Saccharomyces cerevisiae JAY291]
Length = 606
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 88/148 (59%), Gaps = 7/148 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPD----VKSVLLVGGVE--VKADVKKIEEEGANLL 55
+II+PTRELS QI V F+ P +K LLVG E V+ DV +L
Sbjct: 86 SLIIAPTRELSRQIESVVLSFLEHYPSDLFPIKCQLLVGTNEATVRDDVSSFLRNRPQIL 145
Query: 56 IGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
IGTPGR+ D ++ M + ++V+DEADRLLDM F K I+ LPK RRTGLFSA
Sbjct: 146 IGTPGRVLDFLQ-MPAVKTSACSMVVMDEADRLLDMSFIKDTEKILRLLPKQRRTGLFSA 204
Query: 116 TQTEAVEELSKAGLRNPVRVEVRAESKS 143
T A ++ K GLRNPVR+ V +++++
Sbjct: 205 TMRSAGSDIFKTGLRNPVRITVNSKNQA 232
>gi|323305103|gb|EGA58853.1| Spb4p [Saccharomyces cerevisiae FostersB]
Length = 606
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 88/148 (59%), Gaps = 7/148 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPD----VKSVLLVGGVE--VKADVKKIEEEGANLL 55
+II+PTRELS QI V F+ P +K LLVG E V+ DV +L
Sbjct: 86 SLIIAPTRELSRQIESVVLSFLEHYPSDLFPIKCQLLVGTNEATVRDDVSNFLRNRPQIL 145
Query: 56 IGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
IGTPGR+ D ++ M + ++V+DEADRLLDM F K I+ LPK RRTGLFSA
Sbjct: 146 IGTPGRVLDFLQ-MPAVKTSACSMVVMDEADRLLDMSFIKDTEKILRLLPKQRRTGLFSA 204
Query: 116 TQTEAVEELSKAGLRNPVRVEVRAESKS 143
T A ++ K GLRNPVR+ V +++++
Sbjct: 205 TMRSAGSDIFKTGLRNPVRITVNSKNQA 232
>gi|84995130|ref|XP_952287.1| ATP-dependent RNA helicase [Theileria annulata strain Ankara]
gi|65302448|emb|CAI74555.1| ATP-dependent RNA helicase, putative [Theileria annulata]
Length = 713
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 97/181 (53%), Gaps = 32/181 (17%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTL------------------------PDVKSVLLVG 36
+II PTRELS Q++ + F+ +V S+L++G
Sbjct: 74 FSVIILPTRELSIQVFDIIIDFLQFTHLNMSNSINNTAETDKLNMYRIMEKNVYSILMIG 133
Query: 37 GVEVKADVKKIEEEGAN-----LLIGTPGRLYDIMERMD---VLDFRNLEILVLDEADRL 88
G V +++ +++ N ++GTPGRL +M+ + V FRNL L+LDEADRL
Sbjct: 134 GTSVDIEIRDMKKAIENTFVKSFVVGTPGRLRHVMDLLSHEFVWTFRNLRFLILDEADRL 193
Query: 89 LDMGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSA 148
L+MGFQ +S I++ LPK R+TGLFSAT VE LSK L N + + S ++H++
Sbjct: 194 LEMGFQNDLSNILTYLPKQRQTGLFSATLNTGVETLSKLCLHNHIHINTDTPSDTNHINK 253
Query: 149 S 149
+
Sbjct: 254 T 254
>gi|190406571|gb|EDV09838.1| ATP-dependent rRNA helicase SPB4 [Saccharomyces cerevisiae RM11-1a]
gi|323355178|gb|EGA87005.1| Spb4p [Saccharomyces cerevisiae VL3]
Length = 606
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 88/148 (59%), Gaps = 7/148 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPD----VKSVLLVGGVE--VKADVKKIEEEGANLL 55
+II+PTRELS QI V F+ P +K LLVG E V+ DV +L
Sbjct: 86 SLIIAPTRELSRQIESVVLSFLEHYPSDLFPIKCQLLVGTNEATVRDDVSSFLRNRPQIL 145
Query: 56 IGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
IGTPGR+ D ++ M + ++V+DEADRLLDM F K I+ LPK RRTGLFSA
Sbjct: 146 IGTPGRVLDFLQ-MPAVKTSACSMVVMDEADRLLDMSFIKDTEKILRLLPKQRRTGLFSA 204
Query: 116 TQTEAVEELSKAGLRNPVRVEVRAESKS 143
T A ++ K GLRNPVR+ V +++++
Sbjct: 205 TMRSAGSDIFKTGLRNPVRITVNSKNQA 232
>gi|409078086|gb|EKM78450.1| hypothetical protein AGABI1DRAFT_121530 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 832
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 91/136 (66%), Gaps = 3/136 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ V + I + L++GG +K + ++ N+L+ TPGR
Sbjct: 133 ALIISPTRELAVQIFEVLRS-IGGYHTFSAGLVIGGKNLKDEKDRLSR--MNILVATPGR 189
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M++ D NL++LVLDEADR+LDMGFQ+ +S ++S LPK R+T LFSATQT++V
Sbjct: 190 LLQHMDQTFGFDADNLQMLVLDEADRILDMGFQRTLSALLSHLPKSRQTLLFSATQTQSV 249
Query: 122 EELSKAGLRNPVRVEV 137
+L++ L+ PV + +
Sbjct: 250 NDLARLSLKEPVSIGI 265
>gi|385300993|gb|EIF45228.1| putative spb4-like dead box rna helicase [Dekkera bruxellensis
AWRI1499]
Length = 586
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 93/145 (64%), Gaps = 6/145 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFI----STLPDVKSVLLVGGVE-VKADVKKIEEEGANLLI 56
+++ PTREL++Q+ V + F+ LPD+ + LLVG ++ V+ D++ E + +L+
Sbjct: 56 ALVMVPTRELANQVVQVFESFLEYQPDDLPDIXAQLLVGSIQSVQEDLQYFXENNSFILV 115
Query: 57 GTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
GTPGR+ D + V + EI++LDEADRLLD+ F ++ LPK RRTGLFSAT
Sbjct: 116 GTPGRVNDFLSSPQV-KTNSCEIIILDEADRLLDISFLHATESVLKMLPKQRRTGLFSAT 174
Query: 117 QTEAVEELSKAGLRNPVRVEVRAES 141
++A ++ K G+ NPV++ V++ S
Sbjct: 175 LSDAGXDIFKTGMTNPVKITVKSNS 199
>gi|426194090|gb|EKV44022.1| hypothetical protein AGABI2DRAFT_153325 [Agaricus bisporus var.
bisporus H97]
Length = 828
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 91/136 (66%), Gaps = 3/136 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ V + I + L++GG +K + ++ N+L+ TPGR
Sbjct: 129 ALIISPTRELAVQIFEVLRS-IGGYHTFSAGLVIGGKNLKDEKDRLSR--MNILVATPGR 185
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M++ D NL++LVLDEADR+LDMGFQ+ +S ++S LPK R+T LFSATQT++V
Sbjct: 186 LLQHMDQTFGFDADNLQMLVLDEADRILDMGFQRTLSALLSHLPKSRQTLLFSATQTQSV 245
Query: 122 EELSKAGLRNPVRVEV 137
+L++ L+ PV + +
Sbjct: 246 NDLARLSLKEPVSIGI 261
>gi|21627812|emb|CAD37144.1| probable ATP-dependent RNA helicase [Aspergillus fumigatus]
Length = 750
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+SPTREL+ QI+ V + I + L++GG +K + +++ N+L+ TPGR
Sbjct: 122 ALILSPTRELAIQIFEVLRK-IGRYHTFSAGLVIGGKSLKEEQERLGR--MNILVCTPGR 178
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ +++ + D NL++LVLDEADR+LD+GFQ+ + II LPK R+T LFSATQT+ V
Sbjct: 179 MLQHLDQTALFDTYNLQMLVLDEADRILDLGFQQTVDAIIGHLPKERQTLLFSATQTKKV 238
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNV 170
+L++ L++P V V + S S Q TPL L+++W+
Sbjct: 239 SDLARLSLQDPEYVAVHETASSATPSKLQQHYVI--TPLPQKLDILWSF 285
>gi|326482507|gb|EGE06517.1| ATP-dependent rRNA helicase spb4 [Trichophyton equinum CBS 127.97]
Length = 265
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 95/168 (56%), Gaps = 31/168 (18%)
Query: 2 GMIISPTRELSSQIYHV-----------------------------AQPFISTLPDVKSV 32
+I+SPTREL+ QI+ V +P+ S+ V
Sbjct: 90 AIIVSPTRELAEQIHSVLHSLLAFHGPSASKLAQLDGKEPQLDPETGKPYRSSTLTVIPQ 149
Query: 33 LLVGGVEVKA-DVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLD 90
LL+GG A D+ + NLLI TPGRL +++ V + E+LVLDEADRLLD
Sbjct: 150 LLLGGTTTPAQDLSVFLKHSPNLLISTPGRLLELLSSPHVHCPQSSFEVLVLDEADRLLD 209
Query: 91 MGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVR 138
+GF+ + I++RLPK RRTGLFSA+ +EAV+++ + GLRNPV++ V+
Sbjct: 210 LGFKDDLQKILARLPKQRRTGLFSASVSEAVDQIVRVGLRNPVKIAVK 257
>gi|219111923|ref|XP_002177713.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410598|gb|EEC50527.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 620
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 105/170 (61%), Gaps = 15/170 (8%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVE----------VKADVKKIEEEG 51
+I+SPTREL+ Q + VAQ + + +LLVGG V D+K ++ G
Sbjct: 75 ALILSPTRELAQQTHRVAQGLCAACNIPEPLLLVGGSSSGGGSVNHRPVTEDLKNFQKMG 134
Query: 52 ANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTG 111
++++IGT GR+ D++ R V+D LE L+LDEAD LL+MGF + + I+SR+PK+RRTG
Sbjct: 135 SSIVIGTCGRVEDVLSRYAVIDCSELESLILDEADVLLNMGFAQSLQNILSRIPKMRRTG 194
Query: 112 LFSATQTEAV-----EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASS 156
LFSAT + + E + +AG+RNPV ++V SK+ + + + A+S
Sbjct: 195 LFSATTSTSTSSSLQEWMQRAGMRNPVWIDVTVASKAQQEALAKNEPATS 244
>gi|296423559|ref|XP_002841321.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637558|emb|CAZ85512.1| unnamed protein product [Tuber melanosporum]
Length = 621
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/138 (47%), Positives = 92/138 (66%), Gaps = 7/138 (5%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLP----DVKSVLLVGGV-EVKADVKKIEEEGANLLI 56
G++I PTREL+ QI+ V + P +K+ LL GG ++D++ +G N+L+
Sbjct: 115 GIVIVPTRELAGQIFSVLSSLLQFQPPSETGLKAQLLRGGEGNTRSDLQAFLRDGPNILV 174
Query: 57 GTPGRLYDIM-ERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
TPGRL +++ R V+ E+LVLDEADRLLD+GF + ++ I+SRLPK RRTGLFSA
Sbjct: 175 CTPGRLEELLGSRYVVVSGETFEMLVLDEADRLLDLGFLEVLARIMSRLPKQRRTGLFSA 234
Query: 116 TQTEA-VEELSKAGLRNP 132
+ TEA V L ++GLRNP
Sbjct: 235 SVTEAVVGGLVRSGLRNP 252
>gi|350629917|gb|EHA18290.1| hypothetical protein ASPNIDRAFT_38107 [Aspergillus niger ATCC 1015]
Length = 802
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 102/168 (60%), Gaps = 5/168 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+++SPTREL+ QI+ V + + + L++GG ++ + +++ N+L+ TPGR
Sbjct: 122 ALVLSPTRELAIQIFEVLRK-VGRYHTFSAGLVIGGKSLREEQERLGR--MNILVCTPGR 178
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ +++ + NL++LVLDEADR+LDMGFQK + II LPK R+T LFSATQT+ V
Sbjct: 179 MLQHLDQTSFFETHNLQMLVLDEADRILDMGFQKTVDAIIGHLPKERQTLLFSATQTKKV 238
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWN 169
+L++ L++P V V + S S Q TPL L+V+W+
Sbjct: 239 SDLARLSLQDPEYVAVHEAASSATPSKLQQHYVV--TPLPQKLDVLWS 284
>gi|323449078|gb|EGB04969.1| hypothetical protein AURANDRAFT_31627 [Aureococcus anophagefferens]
Length = 209
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 90/136 (66%), Gaps = 8/136 (5%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+ +SPTREL++Q + V + + S L+VGG ++ V+ ++++ TPGRL
Sbjct: 82 VCVSPTRELATQTFAVLRKLCAAKALAAS-LVVGGAAMERAVRD------DVVVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+++R +D R + +LVLDEAD LL++GF +++ I+ LP+ RRT LFSATQT AV
Sbjct: 135 DDLLKR-GAMDGRRVAVLVLDEADTLLELGFAEELERIMRALPRQRRTALFSATQTRAVA 193
Query: 123 ELSKAGLRNPVRVEVR 138
EL++AGLRNP V VR
Sbjct: 194 ELARAGLRNPATVRVR 209
>gi|358366429|dbj|GAA83050.1| ATP-dependent RNA helicase Dbp4 [Aspergillus kawachii IFO 4308]
Length = 803
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 102/168 (60%), Gaps = 5/168 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+++SPTREL+ QI+ V + + + L++GG ++ + +++ N+L+ TPGR
Sbjct: 122 ALVLSPTRELAIQIFEVLRK-VGRYHTFSAGLVIGGKSLREEQERLGR--MNILVCTPGR 178
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ +++ + NL++LVLDEADR+LDMGFQK + II LPK R+T LFSATQT+ V
Sbjct: 179 MLQHLDQTSFFETHNLQMLVLDEADRILDMGFQKTVDAIIGHLPKERQTLLFSATQTKKV 238
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWN 169
+L++ L++P V V + S S Q TPL L+V+W+
Sbjct: 239 SDLARLSLQDPEYVAVHETASSATPSKLQQHYVV--TPLPQKLDVLWS 284
>gi|261201061|ref|XP_002626931.1| ATP-dependent rRNA helicase SPB4 [Ajellomyces dermatitidis
SLH14081]
gi|239594003|gb|EEQ76584.1| ATP-dependent rRNA helicase SPB4 [Ajellomyces dermatitidis
SLH14081]
Length = 623
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 95/168 (56%), Gaps = 31/168 (18%)
Query: 2 GMIISPTRELSSQIYHV--------------------------AQPFIS----TLPDVKS 31
+IISPTREL++QIY+V A P S TL V
Sbjct: 90 AIIISPTRELATQIYNVLLSLLAFHGPSAARLQRAGNNNEGDEANPAPSYPSSTLKIVPQ 149
Query: 32 VLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLD 90
+LL G D+ ++ N+L+ TPGRL +++ + E+LVLDEADRLLD
Sbjct: 150 LLLGGATTPAQDLSTFLKQSPNVLVSTPGRLLELLSSPHAHCPQSSFEVLVLDEADRLLD 209
Query: 91 MGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVR 138
+GF++ + I+ RLPK RRTGLFSA+ +EAV+++ + GLRNPV++ V+
Sbjct: 210 LGFKEDLQKILQRLPKQRRTGLFSASVSEAVDQIIRVGLRNPVKIAVK 257
>gi|145240499|ref|XP_001392896.1| ATP-dependent RNA helicase dbp4 [Aspergillus niger CBS 513.88]
gi|134034071|sp|A2QS00.1|DBP4_ASPNC RecName: Full=ATP-dependent RNA helicase dbp4
gi|134077418|emb|CAK45672.1| unnamed protein product [Aspergillus niger]
Length = 802
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 102/168 (60%), Gaps = 5/168 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+++SPTREL+ QI+ V + + + L++GG ++ + +++ N+L+ TPGR
Sbjct: 122 ALVLSPTRELAIQIFEVLRK-VGRYHTFSAGLVIGGKSLREEQERLGR--MNILVCTPGR 178
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ +++ + NL++LVLDEADR+LDMGFQK + II LPK R+T LFSATQT+ V
Sbjct: 179 MLQHLDQTSFFETHNLQMLVLDEADRILDMGFQKTVDAIIGHLPKERQTLLFSATQTKKV 238
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWN 169
+L++ L++P V V + S S Q TPL L+V+W+
Sbjct: 239 SDLARLSLQDPEYVAVHEAASSATPSKLQQHYVV--TPLPQKLDVLWS 284
>gi|315122206|ref|YP_004062695.1| ATP dependent RNA helicase protein [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495608|gb|ADR52207.1| ATP dependent RNA helicase protein [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 459
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 109/185 (58%), Gaps = 13/185 (7%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+ PTREL+SQ+ Q + ++ LL+GG+ + KK+E GA++LI TPGR+
Sbjct: 76 LILEPTRELASQVADNFQKYGKNY-NLNIALLIGGIPFETQNKKLER-GADVLICTPGRI 133
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D R +L N+EILV+DEADR+LDMGF I I S +P R+T LFSAT TE ++
Sbjct: 134 LDHFNRGKLL-MNNIEILVIDEADRMLDMGFIPDIQSITSLIPFTRQTLLFSATMTEELQ 192
Query: 123 ELSKAGLRNPVRVEVR-----AESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNHH 177
++S+ L+NP R+EV AE+ H A+ Q + GL ++I + ++N
Sbjct: 193 KVSEKFLQNPKRIEVNTPYSTAETIEHCFVATYPQYSKK---FGLVQKLIREQDAIKNA- 248
Query: 178 NLLIC 182
++ C
Sbjct: 249 -IIFC 252
>gi|303317436|ref|XP_003068720.1| ATP-dependent rRNA helicase spb4, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240108401|gb|EER26575.1| ATP-dependent rRNA helicase spb4, putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 653
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 92/168 (54%), Gaps = 31/168 (18%)
Query: 2 GMIISPTRELSSQIYHV----------------------------AQPFI--STLPDVKS 31
+I+SPTREL+ QIY V PF STL V
Sbjct: 93 AIIVSPTRELAEQIYKVLLSLLAFHAPSAAAIQPSTSHETADGETILPFYPSSTLKVVPQ 152
Query: 32 VLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLD 90
+LL G D+ + NL + TPGRL +++ V + E+LVLDEADRLLD
Sbjct: 153 LLLGGATTPAQDLSTFLKRSPNLFVSTPGRLLELLSSPHVHCPQTSFEVLVLDEADRLLD 212
Query: 91 MGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVR 138
+GF+ + I++RLPK RRTGLFSAT ++AV+++ + GLRNPV++ V+
Sbjct: 213 LGFKDDLQKILARLPKQRRTGLFSATVSDAVDQIIRVGLRNPVKIAVK 260
>gi|19074678|ref|NP_586184.1| ATP-DEPENDENT RNA HELICASE (DEAD box family) [Encephalitozoon
cuniculi GB-M1]
gi|74664181|sp|Q8SR49.1|SPB4_ENCCU RecName: Full=ATP-dependent rRNA helicase SPB4
gi|19069320|emb|CAD25788.1| ATP-DEPENDENT RNA HELICASE (DEAD box family) [Encephalitozoon
cuniculi GB-M1]
Length = 463
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 95/135 (70%), Gaps = 7/135 (5%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++I+PTREL+ QI VA F DVK +GG+ ++ D K+++EE ++ +GTPGRL
Sbjct: 80 VVITPTRELALQIREVAGLF-----DVKCECFIGGMSIEEDYKRMKEE-FSIAVGTPGRL 133
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+I+ + + F +L LVLDEAD+LL GF++++ ++++LP+ R TGLFSAT+ ++V+
Sbjct: 134 LEIVGK-ETKKFSSLSHLVLDEADKLLGFGFEEKLMQLLAKLPRNRVTGLFSATRNDSVD 192
Query: 123 ELSKAGLRNPVRVEV 137
+LS+ LRNPV + V
Sbjct: 193 KLSRVFLRNPVSINV 207
>gi|70992287|ref|XP_750992.1| DEAD box RNA helicase (Hca4) [Aspergillus fumigatus Af293]
gi|74670609|sp|Q4WM60.1|DBP4_ASPFU RecName: Full=ATP-dependent RNA helicase dbp4
gi|66848625|gb|EAL88954.1| DEAD box RNA helicase (Hca4), putative [Aspergillus fumigatus
Af293]
gi|159124561|gb|EDP49679.1| DEAD box RNA helicase (Hca4), putative [Aspergillus fumigatus
A1163]
Length = 787
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+SPTREL+ QI+ V + I + L++GG +K + +++ N+L+ TPGR
Sbjct: 122 ALILSPTRELAIQIFEVLRK-IGRYHTFSAGLVIGGKSLKEEQERLGR--MNILVCTPGR 178
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ +++ + D NL++LVLDEADR+LD+GFQ+ + II LPK R+T LFSATQT+ V
Sbjct: 179 MLQHLDQTALFDTYNLQMLVLDEADRILDLGFQQTVDAIIGHLPKERQTLLFSATQTKKV 238
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNV 170
+L++ L++P V V + S S Q TPL L+++W+
Sbjct: 239 SDLARLSLQDPEYVAVHETASSATPSKLQQHYVI--TPLPQKLDILWSF 285
>gi|443715023|gb|ELU07175.1| hypothetical protein CAPTEDRAFT_143878, partial [Capitella teleta]
Length = 497
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 106/181 (58%), Gaps = 9/181 (4%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ QI+ V + + D L++GG +K + +I N++I TPGR+
Sbjct: 124 LIISPTRELAYQIFEVIKK-VGKHHDFSVGLVIGGKSIKDEAARIT--STNIVICTPGRM 180
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+E NL+ILVLDEADR+LD+GF + ++ II LP R+T LFSATQT++V+
Sbjct: 181 LQHLEETAFFVADNLQILVLDEADRILDLGFARTMNAIIESLPPERQTLLFSATQTKSVK 240
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLH--LEVIWNVNQMRNHHNLL 180
+L++ L++PV V V ++ +++ QL S LH + +W+ + LL
Sbjct: 241 DLARLSLKDPVYVSVHEKA----ANSTPSQLQQSYIVCELHEKISFLWSFIKQHPRTKLL 296
Query: 181 I 181
+
Sbjct: 297 V 297
>gi|195351764|ref|XP_002042399.1| GM13518 [Drosophila sechellia]
gi|194124242|gb|EDW46285.1| GM13518 [Drosophila sechellia]
Length = 825
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 96/155 (61%), Gaps = 3/155 (1%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ + + D + L++GG +K + ++++ N+LI TPGR
Sbjct: 147 AIIISPTRELAYQIFETLKK-VGKHHDFSAGLIIGGKNLKFERTRMDQ--CNILICTPGR 203
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + + +E+LVLDEADR LDMGFQK ++ II P R+T LFSATQT V
Sbjct: 204 LLQHMDENPLFNTSTMEMLVLDEADRCLDMGFQKTLNSIIENFPPARQTLLFSATQTNTV 263
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASS 156
++L++ L++PV V + +AS+++ ++
Sbjct: 264 QDLARLNLKDPVYVGYGGATPGEEPNASTKKAPNT 298
>gi|443900245|dbj|GAC77571.1| RNA Helicase [Pseudozyma antarctica T-34]
Length = 909
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 91/136 (66%), Gaps = 3/136 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++ISPTREL+ QI+ V + I + L++GG +VK + ++ N+L+ TPGRL
Sbjct: 137 LVISPTRELAIQIFEVLRK-IGPYHTFSAGLVIGGKDVKQEKDRLSR--INILVATPGRL 193
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M++ D NL+ILVLDEADR+LDMGF + ++ I+ LP+ R+T LFSATQT+ V+
Sbjct: 194 LQHMDQTLGFDTSNLQILVLDEADRILDMGFSRTLNAIVENLPRDRQTMLFSATQTKRVK 253
Query: 123 ELSKAGLRNPVRVEVR 138
+L++ L+NP V VR
Sbjct: 254 DLARLSLQNPEYVAVR 269
>gi|194768182|ref|XP_001966192.1| GF19542 [Drosophila ananassae]
gi|190623077|gb|EDV38601.1| GF19542 [Drosophila ananassae]
Length = 841
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/134 (44%), Positives = 88/134 (65%), Gaps = 3/134 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ + + D + L++GG +K + ++++ N+LI TPGR
Sbjct: 147 AIIISPTRELAYQIFETLKK-VGKHHDFSAGLIIGGKNLKFERTRMDQ--CNILICTPGR 203
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + + +LE+LVLDEADR LDMGFQK ++ II P R+T LFSATQT V
Sbjct: 204 LLQHMDENPLFNTSSLEVLVLDEADRCLDMGFQKTLNSIIENFPPERQTLLFSATQTNTV 263
Query: 122 EELSKAGLRNPVRV 135
E+L++ L++PV V
Sbjct: 264 EDLARLNLKDPVYV 277
>gi|410028622|ref|ZP_11278458.1| DNA/RNA helicase [Marinilabilia sp. AK2]
Length = 392
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 101/165 (61%), Gaps = 6/165 (3%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLP-DVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++I PTREL++Q+ V + F LP +KS + GGV + + K+ G ++L+ TPGR
Sbjct: 92 LVIVPTRELAAQVEEVVRLFSKHLPRKIKSAAVFGGVSINPQMMKLN--GTDILVATPGR 149
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D++ + + + L L+LDEAD++L +GF+ ++ I++RLPK R+ LFSAT EAV
Sbjct: 150 LLDLISK-NAISISELTTLILDEADKVLSLGFKLEVDEILNRLPKKRQNILFSATMDEAV 208
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASS--KTPLGLHL 164
E L L+NPV++E++ E + + A + L K PL HL
Sbjct: 209 EGLIDKLLKNPVKIEIQTEEVTPDLIAQTAYLVDPERKGPLLRHL 253
>gi|334329818|ref|XP_003341271.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 isoform 2
[Monodelphis domestica]
Length = 881
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 93/140 (66%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I + N+LI TPGRL
Sbjct: 144 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHESERINQ--INILICTPGRL 200
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL++LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 201 LQHMDETTYFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 260
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L++P V V ++K
Sbjct: 261 DLARLSLKDPAYVWVHEKAK 280
>gi|126326670|ref|XP_001371368.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 isoform 1
[Monodelphis domestica]
Length = 879
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 93/140 (66%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I + N+LI TPGRL
Sbjct: 144 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHESERINQ--INILICTPGRL 200
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL++LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 201 LQHMDETTYFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 260
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L++P V V ++K
Sbjct: 261 DLARLSLKDPAYVWVHEKAK 280
>gi|237806840|ref|YP_002891280.1| DEAD/DEAH box helicase [Tolumonas auensis DSM 9187]
gi|237499101|gb|ACQ91694.1| DEAD/DEAH box helicase domain protein [Tolumonas auensis DSM 9187]
Length = 489
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 94/135 (69%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL++Q+ + LP +KSV++ GGV + + + + GA++L+ TPGRL
Sbjct: 77 LVLTPTRELAAQVAESVTTYGKYLP-LKSVVVFGGVNINPQMLAMRK-GADVLVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D++ + + L FR LE+L+LDEADR+LDMGF + I II+ LPK R+T +FSAT ++ +
Sbjct: 135 LDLVSQ-NALHFRQLEVLILDEADRMLDMGFIRDIRKIINMLPKDRQTLMFSATFSDEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
L+K L PV+++V
Sbjct: 194 TLAKGLLNEPVQIDV 208
>gi|146417454|ref|XP_001484696.1| hypothetical protein PGUG_02425 [Meyerozyma guilliermondii ATCC
6260]
Length = 601
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 95/156 (60%), Gaps = 9/156 (5%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPD----VKSVLLVGGVE-VKADVKKIEEEGANLLI 56
G++ISPTREL++QI V + P+ +K+ L+VG + V+ D+ E ++I
Sbjct: 91 GIVISPTRELANQINTVFHTLLQFYPEDQPPIKTQLIVGSLATVREDLNAFAENKPQIII 150
Query: 57 GTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
TPGRL D + + +E++VLDEADRLLD+ FQ + I+ +LPK RRTGLFSAT
Sbjct: 151 ATPGRLLDFFSS-NAVKRSTVEMVVLDEADRLLDISFQNDVVSILKKLPKQRRTGLFSAT 209
Query: 117 QTEAVEELSKAGLRNPVRVEV---RAESKSHHVSAS 149
A + + + G+ NPV++ V +AESK ++ +
Sbjct: 210 LLSAGDSIFRTGMSNPVKISVNSNKAESKPQSLTVN 245
>gi|320038684|gb|EFW20619.1| ATP-dependent rRNA helicase spb4 [Coccidioides posadasii str.
Silveira]
Length = 653
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 94/168 (55%), Gaps = 31/168 (18%)
Query: 2 GMIISPTRELSSQIYHV--------------AQPFIST--------LPDVKSV------- 32
+I+SPTREL+ QIY V QP S LP S
Sbjct: 93 AIIVSPTRELAEQIYKVLLSLLAFHAPSAAAIQPSTSDETADGETILPSYPSSTLKVVPQ 152
Query: 33 LLVGGVEVKA-DVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLD 90
LL+GG A D+ + NL + TPGRL +++ V + E+LVLDEADRLLD
Sbjct: 153 LLLGGATTPAQDLSTFLKRSPNLFVSTPGRLLELLSSPHVHCPQTSFEVLVLDEADRLLD 212
Query: 91 MGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVR 138
+GF+ + I++RLPK RRTGLFSAT ++AV+++ + GLRNPV++ V+
Sbjct: 213 LGFKDDLQKILARLPKQRRTGLFSATVSDAVDQIIRVGLRNPVKIAVK 260
>gi|383457736|ref|YP_005371725.1| ATP-dependent RNA helicase [Corallococcus coralloides DSM 2259]
gi|380732522|gb|AFE08524.1| ATP-dependent RNA helicase [Corallococcus coralloides DSM 2259]
Length = 461
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 101/158 (63%), Gaps = 6/158 (3%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+++ PTREL +Q+ + +P V+ + L GG ++ V+ +E+ G ++ +GTPGR
Sbjct: 73 ALVLCPTRELCAQVAGEIRRLARRMPGVQVLALAGGSPIRPQVEALEK-GVHIGVGTPGR 131
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ D+++R +VLD R+L +VLDEADR+LDMGF++ + ++ P R+T LFSAT + +
Sbjct: 132 IMDLLDR-EVLDTRHLATVVLDEADRMLDMGFREDMERVLGATPAKRQTVLFSATFPDDI 190
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTP 159
E+LS+A ++PVRV + E + + QQ+ + TP
Sbjct: 191 EKLSRAFQKDPVRVSLAQEEAAPDI----QQVGYACTP 224
>gi|239607124|gb|EEQ84111.1| ATP-dependent rRNA helicase SPB4 [Ajellomyces dermatitidis ER-3]
gi|327351075|gb|EGE79932.1| ATP-dependent rRNA helicase SPB4 [Ajellomyces dermatitidis ATCC
18188]
Length = 657
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 96/170 (56%), Gaps = 31/170 (18%)
Query: 2 GMIISPTRELSSQIYHV--------------------------AQPFIS----TLPDVKS 31
+IISPTREL++QIY+V A P S TL V
Sbjct: 90 AIIISPTRELATQIYNVLLSLLAFHGPSAARLQRAGNNNEGDEANPAPSYPSSTLKIVPQ 149
Query: 32 VLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLD 90
+LL G D+ ++ N+L+ TPGRL +++ + E+LVLDEADRLLD
Sbjct: 150 LLLGGATTPAQDLSTFLKQSPNVLVSTPGRLLELLSSPHAHCPQSSFEVLVLDEADRLLD 209
Query: 91 MGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAE 140
+GF++ + I+ RLPK RRTGLFSA+ +EAV+++ + GLRNPV++ V+ +
Sbjct: 210 LGFKEDLQKILQRLPKQRRTGLFSASVSEAVDQIIRVGLRNPVKIAVKVK 259
>gi|119471850|ref|XP_001258227.1| DEAD box RNA helicase (Hca4), putative [Neosartorya fischeri NRRL
181]
gi|134034072|sp|A1DNF9.1|DBP4_NEOFI RecName: Full=ATP-dependent RNA helicase dbp4
gi|119406379|gb|EAW16330.1| DEAD box RNA helicase (Hca4), putative [Neosartorya fischeri NRRL
181]
Length = 810
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+SPTREL+ QI+ V + I + L++GG +K + +++ N+L+ TPGR
Sbjct: 122 ALILSPTRELAIQIFEVLRK-IGRYHTFSAGLVIGGKSLKEEQERLGR--MNILVCTPGR 178
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ +++ + D NL++LVLDEADR+LD+GFQ+ + II LPK R+T LFSATQT+ V
Sbjct: 179 MLQHLDQTALFDTYNLQMLVLDEADRILDLGFQQTVDAIIGHLPKERQTLLFSATQTKKV 238
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNV 170
+L++ L++P V V + S S Q TPL L+++W+
Sbjct: 239 SDLARLSLQDPEYVAVHETASSATPSKLQQHYVI--TPLPQKLDILWSF 285
>gi|392560272|gb|EIW53455.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 791
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 93/136 (68%), Gaps = 3/136 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ V + I + L++GG +K + +++ N+L+ TPGR
Sbjct: 128 ALIISPTRELAVQIFDVLRS-IGGYHSFSAGLVIGGKNLKDESERLAR--MNILVATPGR 184
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M++ + NL++LVLDEADR+LDMGFQ+ ++ ++S LPK R+T LFSATQT++V
Sbjct: 185 LLQHMDQTIGFECDNLQVLVLDEADRILDMGFQRTLTALLSHLPKSRQTLLFSATQTQSV 244
Query: 122 EELSKAGLRNPVRVEV 137
+L++ L++PV V +
Sbjct: 245 ADLARLSLKDPVSVGI 260
>gi|326433402|gb|EGD78972.1| hypothetical protein PTSG_01945 [Salpingoeca sp. ATCC 50818]
Length = 845
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 104/182 (57%), Gaps = 6/182 (3%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+++SPTREL+ Q Y+ ++T ++ L +GG VK ++K N++I TPGR
Sbjct: 130 AVVVSPTRELAQQTYNTLVQ-VATGHEMSCALFIGGNNVK--IEKTMAATRNIIICTPGR 186
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ F NL++LVLDEADRLLD GF++++ I+S +P R+T LFSATQT V
Sbjct: 187 LVQHMDETPNFGFDNLQVLVLDEADRLLDSGFKEEVDRIVSEMPPHRQTLLFSATQTAEV 246
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNHHNLLI 181
+EL++ L NPV + V K + + + + PL + ++++ + H ++
Sbjct: 247 DELARLSLHNPVFINV---HKDQAATPARLKQCYVEVPLHEKINLLYSFIESHKKHKTMV 303
Query: 182 CL 183
L
Sbjct: 304 FL 305
>gi|425777569|gb|EKV15735.1| DEAD box RNA helicase (Hca4), putative [Penicillium digitatum Pd1]
gi|425779636|gb|EKV17678.1| DEAD box RNA helicase (Hca4), putative [Penicillium digitatum
PHI26]
Length = 808
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 104/168 (61%), Gaps = 5/168 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+++SPTREL+ QI+ V + I + + L++GG ++ + ++ N+L+ TPGR
Sbjct: 121 ALVLSPTRELAIQIFEVLRK-IGRYHNFSAGLVIGGKSLREEQDRLGR--MNILVCTPGR 177
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ +++ + + NL++LVLDEADR++DMGFQK + I+ LPK R+T LFSATQT+ V
Sbjct: 178 MLQHLDQTAMFETNNLQMLVLDEADRIMDMGFQKTVDAILDHLPKQRQTMLFSATQTKKV 237
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWN 169
+L++ L+ P V V + S + S+ Q + TPL L+ +W+
Sbjct: 238 SDLARLSLQEPEYVSVHEAAAS--ATPSTLQQHYTVTPLPQKLDTLWS 283
>gi|451999043|gb|EMD91506.1| hypothetical protein COCHEDRAFT_1175511 [Cochliobolus
heterostrophus C5]
Length = 813
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 105/182 (57%), Gaps = 5/182 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+SPTREL+ QI+ V + + LL+GG ++A+ + + + N+L+ TPGR
Sbjct: 125 ALILSPTRELAIQIFDVLRKIGRHGHMFAAGLLIGGKSLQAEREALTK--MNILVATPGR 182
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ + + + +L++LVLDEADR+LDMGFQ+ + II LPK R+T LFSATQ++ V
Sbjct: 183 MLQHLSQTAAFNVDDLKMLVLDEADRILDMGFQRDVDAIIEYLPKERQTLLFSATQSKKV 242
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNHHNLLI 181
+L++ L++P V V AE KS +Q PL L+ +W+ Q +L
Sbjct: 243 SDLARLSLQDPEYVSVHAEDKSATPKGLTQNYII--CPLEEKLDTLWSFIQASKKSKIL- 299
Query: 182 CL 183
C
Sbjct: 300 CF 301
>gi|156844875|ref|XP_001645498.1| hypothetical protein Kpol_1004p13 [Vanderwaltozyma polyspora DSM
70294]
gi|160380618|sp|A7TJ71.1|DBP4_VANPO RecName: Full=ATP-dependent RNA helicase DBP4
gi|156116162|gb|EDO17640.1| hypothetical protein Kpol_1004p13 [Vanderwaltozyma polyspora DSM
70294]
Length = 768
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 91/130 (70%), Gaps = 3/130 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QIY V I T + L++GG +VK ++++I + N+LIGTPGR
Sbjct: 116 ALIISPTRELAMQIYEVLLK-IGTSTSFSAGLVIGGKDVKFEMERISK--INILIGTPGR 172
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ M++ L+ NL++LVLDEADR LDMGF+K + I+S LP R+T LFSATQ++++
Sbjct: 173 ILQHMDQAIGLNTSNLQMLVLDEADRCLDMGFKKTLDAIVSNLPPTRQTLLFSATQSQSL 232
Query: 122 EELSKAGLRN 131
E+L++ L +
Sbjct: 233 EDLARLSLTD 242
>gi|396463052|ref|XP_003836137.1| hypothetical protein LEMA_P054780.1 [Leptosphaeria maculans JN3]
gi|312212689|emb|CBX92772.1| hypothetical protein LEMA_P054780.1 [Leptosphaeria maculans JN3]
Length = 848
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 104/182 (57%), Gaps = 5/182 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+SPTREL+ QI+ V + + LL+GG ++A+ + + N+L+ TPGR
Sbjct: 169 ALILSPTRELAIQIFDVLRKIGRHGHMFSASLLIGGKSLEAERNALPK--TNILVATPGR 226
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L + + + +L++LVLDEADR+LDMGFQ+ + II LPK R+T LFSATQ++ V
Sbjct: 227 LLQHLSQTAMFSADDLKMLVLDEADRILDMGFQRDVDAIIDYLPKERQTLLFSATQSKKV 286
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNHHNLLI 181
+L++ L++P V V AE KS +Q PL ++ +W+ Q +L
Sbjct: 287 SDLARLSLQDPEYVSVHAEDKSATPKGLTQNYII--CPLEEKMDTLWSFIQASKKSKIL- 343
Query: 182 CL 183
C
Sbjct: 344 CF 345
>gi|406662625|ref|ZP_11070716.1| ATP-dependent RNA helicase rhlE [Cecembia lonarensis LW9]
gi|405553393|gb|EKB48651.1| ATP-dependent RNA helicase rhlE [Cecembia lonarensis LW9]
Length = 377
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 109/187 (58%), Gaps = 13/187 (6%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLP-DVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++I PTREL++Q+ V + F LP VKS + GGV + + K+ G ++L+ TPGR
Sbjct: 77 LVIVPTRELAAQVEEVVRLFSKYLPRKVKSAAVFGGVSINPQMMKLN--GTDILVATPGR 134
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D++ + + + L LVLDEAD++L +GF+ ++ I++RLPK R+ LFSAT EAV
Sbjct: 135 LLDLISK-NAISISELTTLVLDEADKVLSLGFKMEVDEILNRLPKQRQNILFSATMDEAV 193
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASS--KTPLGLHL-------EVIWNVNQ 172
E L L+NPV++E++ E + + A + L K PL +L +V+ V+
Sbjct: 194 EGLIGKLLKNPVKIEIQTEEVTPDLIAQTAYLVDPERKGPLLRYLIQEGNWQQVLVFVSS 253
Query: 173 MRNHHNL 179
R NL
Sbjct: 254 KRTADNL 260
>gi|307103042|gb|EFN51307.1| hypothetical protein CHLNCDRAFT_28229 [Chlorella variabilis]
Length = 518
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 105/179 (58%), Gaps = 27/179 (15%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++ISPTREL+ QI+ + + D + LL+GG +VK + ++ G N+L+ TPGR
Sbjct: 143 ALVISPTRELALQIFDELRK-VGRRHDFSAGLLIGGKDVKEEQARVH--GMNILVCTPGR 199
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ D L++LVLDEADR+LDMGF ++ I++ +P+ R+T LFSATQT++V
Sbjct: 200 LLQHMDETPGFDAGQLQVLVLDEADRILDMGFSATLNAIVANIPRQRQTLLFSATQTKSV 259
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLH-----------LEVIWN 169
++L++ L++P + V AE A++ TPL L L+++W+
Sbjct: 260 KDLARLSLKDPEYISVHAE-------------AAAPTPLRLQQAYMVCELPQKLDILWS 305
>gi|302811016|ref|XP_002987198.1| hypothetical protein SELMODRAFT_158505 [Selaginella moellendorffii]
gi|300145095|gb|EFJ11774.1| hypothetical protein SELMODRAFT_158505 [Selaginella moellendorffii]
Length = 493
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 95/157 (60%), Gaps = 3/157 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ QIY VA+ + +++ GGV+ + + +++ G NLL+ TPGRL
Sbjct: 81 LIISPTRELAMQIYGVARKLMKHHSQTHGIVM-GGVKRNVEAEALKK-GVNLLVSTPGRL 138
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++ F+NL+ LV+DEADR+L++GF++ + II LPK R+T LFSATQT VE
Sbjct: 139 LDHLQNTKGFLFKNLQCLVIDEADRILEIGFEEDMKQIIKLLPKERQTVLFSATQTTKVE 198
Query: 123 ELSKAGLRN-PVRVEVRAESKSHHVSASSQQLASSKT 158
+L+K + P+ + V E V Q KT
Sbjct: 199 DLAKLSFKKAPIYIGVDDERSKATVEGLEQGYCVVKT 235
>gi|432106970|gb|ELK32488.1| Putative ATP-dependent RNA helicase DDX10 [Myotis davidii]
Length = 836
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 109 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERIN--NINILVCTPGRL 165
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL++LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 166 LQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 225
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L+NP V V ++K
Sbjct: 226 DLARLSLKNPEYVWVHEKAK 245
>gi|358415521|ref|XP_003583132.1| PREDICTED: probable ATP-dependent RNA helicase DDX10-like [Bos
taurus]
Length = 581
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 338 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERIN--NINILVCTPGRL 394
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL++LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 395 LQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 454
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L+NP V V ++K
Sbjct: 455 DLARLSLKNPEYVWVHEKAK 474
>gi|326473030|gb|EGD97039.1| ATP-dependent RNA helicase DBP4 [Trichophyton tonsurans CBS 112818]
Length = 703
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 102/168 (60%), Gaps = 5/168 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ V + I + L++GG ++ + +++ N+L+ TPGR
Sbjct: 125 ALIISPTRELAIQIFEVLRK-IGRYHTFSAGLVIGGKSLQEEQERLGR--MNILVCTPGR 181
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ M++ D N+++LVLDEADR++DMGFQ + I+ LPK R+T LFSATQT+ V
Sbjct: 182 MLQHMDQTAAFDTDNIQMLVLDEADRIMDMGFQNTVDAIVEHLPKERQTMLFSATQTKKV 241
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWN 169
+L++ L++P + V + S + S+ Q TPL L+ +W+
Sbjct: 242 SDLARLSLQDPEYISVHQAASS--ATPSTLQQHYVVTPLPDKLDTLWS 287
>gi|302789171|ref|XP_002976354.1| hypothetical protein SELMODRAFT_104808 [Selaginella moellendorffii]
gi|300155984|gb|EFJ22614.1| hypothetical protein SELMODRAFT_104808 [Selaginella moellendorffii]
Length = 489
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 95/157 (60%), Gaps = 3/157 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ QIY VA+ + +++ GGV+ + + +++ G NLL+ TPGRL
Sbjct: 77 LIISPTRELAMQIYGVARKLMKHHSQTHGIVM-GGVKRNVEAEALKK-GVNLLVSTPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++ F+NL+ LV+DEADR+L++GF++ + II LPK R+T LFSATQT VE
Sbjct: 135 LDHLQNTKGFLFKNLQCLVIDEADRILEIGFEEDMKQIIKLLPKERQTVLFSATQTTKVE 194
Query: 123 ELSKAGLRN-PVRVEVRAESKSHHVSASSQQLASSKT 158
+L+K + P+ + V E V Q KT
Sbjct: 195 DLAKLSFKKAPIYIGVDDERSKATVEGLEQGYCVVKT 231
>gi|213410545|ref|XP_002176042.1| ATP-dependent rRNA helicase rrp3 [Schizosaccharomyces japonicus
yFS275]
gi|212004089|gb|EEB09749.1| ATP-dependent rRNA helicase rrp3 [Schizosaccharomyces japonicus
yFS275]
Length = 461
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 89/140 (63%), Gaps = 2/140 (1%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
G++++PTREL+ QI + + VKSV++VGG+++ I ++ ++L+ TPG
Sbjct: 112 FGVVLAPTRELAYQISEQFEALGGAM-GVKSVVIVGGMDMVTQAVAISKK-PHILVCTPG 169
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D +E RNL+ LV+DEADRLLDM F I I+ +PK RRT LFSAT T
Sbjct: 170 RLMDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPIIDKILKVIPKERRTFLFSATMTSK 229
Query: 121 VEELSKAGLRNPVRVEVRAE 140
VE+L +A L NPVR+ V ++
Sbjct: 230 VEKLQRASLHNPVRIAVSSK 249
>gi|338733518|ref|YP_004671991.1| ATP-dependent RNA helicase DBP2 [Simkania negevensis Z]
gi|336482901|emb|CCB89500.1| ATP-dependent RNA helicase DBP2 [Simkania negevensis Z]
Length = 432
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 89/141 (63%), Gaps = 2/141 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL+ QI A + +L +K+V +VGG+ A ++++ +LI TPGRL
Sbjct: 87 LILAPTRELAQQIESQANKYSKSLQRIKTVCVVGGMPYPAQMRQLSRP-HEILIATPGRL 145
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D MER + +DF LE+L+LDEADR+LDMGF K + I+ P R+T LFSAT V
Sbjct: 146 IDFMER-NKIDFSRLEMLILDEADRMLDMGFSKPVEQIVQATPSTRQTLLFSATLQGEVI 204
Query: 123 ELSKAGLRNPVRVEVRAESKS 143
+LS+ L P+ + V AE +
Sbjct: 205 KLSEKLLNKPMEIIVHAEQQK 225
>gi|281345859|gb|EFB21443.1| hypothetical protein PANDA_005663 [Ailuropoda melanoleuca]
Length = 752
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 149 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERIN--NINILVCTPGRL 205
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL++LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 206 LQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 265
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L+NP V V ++K
Sbjct: 266 DLARLSLKNPEYVWVHEKAK 285
>gi|406607754|emb|CCH40859.1| DEAD box RNA helicase (Hca4), putative [Wickerhamomyces ciferrii]
Length = 746
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 97/151 (64%), Gaps = 3/151 (1%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QIY V I + L++GG +VK +++++ + N+LIGTPGR
Sbjct: 116 ALIISPTRELAIQIYEVLVK-IGRHNSFSAGLVIGGKDVKFEMERLSK--INILIGTPGR 172
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ +++ +D NL++LVLDEADR+LDMGF+K + I+S LP R+T LFSATQ++++
Sbjct: 173 ILQHLDQTVGMDTNNLQMLVLDEADRILDMGFKKTLDDIVSNLPPTRQTLLFSATQSKSI 232
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQ 152
+L++ L NP + V+ S QQ
Sbjct: 233 SDLARLSLTNPKYIGVKETDDQIATPESLQQ 263
>gi|349603726|gb|AEP99487.1| putative ATP-dependent RNA helicase DDX10-like protein, partial
[Equus caballus]
Length = 828
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 99 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERIN--NINILVCTPGRL 155
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL++LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 156 LQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 215
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L+NP V V ++K
Sbjct: 216 DLARLSLKNPEYVWVHEKAK 235
>gi|395324246|gb|EJF56690.1| DEAD-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 798
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 94/136 (69%), Gaps = 3/136 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL++QI+ V + I + L++GG +K + +++ N+L+ TPGR
Sbjct: 129 ALIITPTRELAAQIFEVLRS-IGGYHSFSAGLIIGGKNLKDERERLSR--MNILVATPGR 185
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M++ + NL++LVLDEADR+LDMGFQ+ ++ ++S LPK R+T LFSATQT++V
Sbjct: 186 LLQHMDQTIGFECDNLQLLVLDEADRILDMGFQRTLAALLSHLPKSRQTLLFSATQTQSV 245
Query: 122 EELSKAGLRNPVRVEV 137
+L++ L++PV V +
Sbjct: 246 ADLARLSLKDPVPVGI 261
>gi|294948517|ref|XP_002785780.1| DEAD/DEAH box ATP-dependent RNA helicase, putative [Perkinsus
marinus ATCC 50983]
gi|239899848|gb|EER17576.1| DEAD/DEAH box ATP-dependent RNA helicase, putative [Perkinsus
marinus ATCC 50983]
Length = 579
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 92/148 (62%), Gaps = 2/148 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
M+ISPTREL+ QIY V + + L +++ GGV K + K+ G N+++ TPGRL
Sbjct: 161 MVISPTRELAMQIYDVCKRVVVVLSQTYGIVM-GGVNRKNEADKLSR-GINIIVATPGRL 218
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++ + NL LV+DEADR+L +GF++ ++ I+ LPK R+T LFSATQT+ V
Sbjct: 219 LDHLQNTRGFVYANLMSLVIDEADRILQIGFEEDMNQILKILPKKRQTSLFSATQTQKVN 278
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASS 150
+L++ L+ P+ V+ + +S +S
Sbjct: 279 DLARLSLKKPIFVQSKGADDDAAISTAS 306
>gi|424513552|emb|CCO66174.1| predicted protein [Bathycoccus prasinos]
Length = 487
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 93/137 (67%), Gaps = 6/137 (4%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPD--VKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+++SPTREL+SQI A+ F D VK +LVGG+++ + +I + ++L+GTPG
Sbjct: 109 LVLSPTRELASQI---AEQFECLGKDIGVKCAVLVGGMDMTSQSLQIGKR-PHVLVGTPG 164
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
R+ D +E R L++L+LDEADRLL++ F+++I I+ +P+ RRT LFSAT T
Sbjct: 165 RVVDHLENTKGFSLRQLKVLILDEADRLLNLDFEEEIDTILKVIPRERRTQLFSATMTSK 224
Query: 121 VEELSKAGLRNPVRVEV 137
V +L +A LR+PV+VEV
Sbjct: 225 VNKLQRACLRDPVKVEV 241
>gi|409047652|gb|EKM57131.1| hypothetical protein PHACADRAFT_119388 [Phanerochaete carnosa
HHB-10118-sp]
Length = 780
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 104/168 (61%), Gaps = 4/168 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ V + I + L++GG +K + ++ N+L+ TPGR
Sbjct: 127 ALIISPTRELAVQIFEVLRS-IGGYHTFSAGLIIGGKNLKDERDRLTR--MNILVATPGR 183
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M++ + NL++LVLDEADR+LDMGF K ++ ++S LPK R+T LFSATQT++V
Sbjct: 184 LLQHMDQTVGFECDNLQMLVLDEADRILDMGFHKTLTALLSHLPKSRQTLLFSATQTKSV 243
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWN 169
+L++ L++PV + + E S + S +Q L L+V+W+
Sbjct: 244 TDLARLSLKDPVYISTQEEEASGVMPKSLEQ-HHVVVDLDKKLDVLWS 290
>gi|315045866|ref|XP_003172308.1| ATP-dependent RNA helicase DBP4 [Arthroderma gypseum CBS 118893]
gi|311342694|gb|EFR01897.1| ATP-dependent RNA helicase DBP4 [Arthroderma gypseum CBS 118893]
Length = 818
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 102/168 (60%), Gaps = 5/168 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
MIISPTREL+ QI+ V + I + L++GG ++ + +++ N+L+ TPGR
Sbjct: 125 AMIISPTRELAIQIFEVLRK-IGRHHTFSAGLVIGGKSLQEEQERLGR--MNILVCTPGR 181
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ M++ D N+++LVLDEADR++DMGFQ + I+ LPK R+T LFSATQT+ V
Sbjct: 182 MLQHMDQTAAFDTDNIQMLVLDEADRIMDMGFQSTVDAIVEHLPKERQTMLFSATQTKKV 241
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWN 169
+L++ L++P + V + S + S+ Q TPL L+ +W+
Sbjct: 242 SDLARLSLQDPEYISVHEAASS--ATPSTLQQHYVVTPLPDKLDTLWS 287
>gi|312084719|ref|XP_003144390.1| ATP-dependent RNA helicase DDX18 [Loa loa]
gi|307760447|gb|EFO19681.1| ATP-dependent RNA helicase DDX18 [Loa loa]
Length = 549
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 87/136 (63%), Gaps = 2/136 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++ISPTRELS Q Y V + P + L++GG + + +K+ G + L+ TPGRL
Sbjct: 143 IVISPTRELSMQTYGVLSEILEKHPALTHGLIMGGANRQTEAQKLAR-GVSFLVATPGRL 201
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++ D +NL+ L++DEADR+LD+GF+ ++ I+ LPK R+T FSATQT V+
Sbjct: 202 LDHLQNTDDFMVKNLKCLIIDEADRILDIGFEIEMQQILRVLPKKRQTMFFSATQTSKVD 261
Query: 123 ELSKAGLR-NPVRVEV 137
EL KA L +PVR+ +
Sbjct: 262 ELIKAALHSDPVRIGI 277
>gi|356501519|ref|XP_003519572.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 32-like [Glycine
max]
Length = 746
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 107/168 (63%), Gaps = 4/168 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL++Q++ V + + + + LL+GG + D++K N+LI TPGR
Sbjct: 142 SIIISPTRELAAQLFDVLK-VVGKHHNFSAGLLIGGRK-DVDMEKERVNELNILICTPGR 199
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ D +++LVLDEADR+LD GF+K+++ IIS+LPK R+T LFSATQT+++
Sbjct: 200 LLQHMDETPNFDCSQMQVLVLDEADRILDSGFKKELNAIISQLPKRRQTLLFSATQTKSI 259
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWN 169
++L++ L++P + V ES + + Q + PL L+++W+
Sbjct: 260 QDLARLSLKDPEYLSVHEESVTSTPTLLKQIVMI--VPLEQKLDMLWS 305
>gi|326477272|gb|EGE01282.1| ATP-dependent RNA helicase DBP4 [Trichophyton equinum CBS 127.97]
Length = 620
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 102/169 (60%), Gaps = 5/169 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ V + I + L++GG ++ + +++ N+L+ TPGR
Sbjct: 112 ALIISPTRELAIQIFEVLRK-IGRYHTFSAGLVIGGKSLQEEQERLGR--MNILVCTPGR 168
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ M++ D N+++LVLDEADR++DMGFQ + I+ LPK R+T LFSATQT+ V
Sbjct: 169 MLQHMDQTAAFDTDNIQMLVLDEADRIMDMGFQNTVDAIVEHLPKERQTMLFSATQTKKV 228
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNV 170
+L++ L++P + V + S + S+ Q TPL L+ +W+
Sbjct: 229 SDLARLSLQDPEYISVHQAASS--ATPSTLQQHYVVTPLPDKLDTLWSF 275
>gi|194212659|ref|XP_001499618.2| PREDICTED: probable ATP-dependent RNA helicase DDX10 [Equus
caballus]
Length = 874
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 145 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERIN--NINILVCTPGRL 201
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL++LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 202 LQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 261
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L+NP V V ++K
Sbjct: 262 DLARLSLKNPEYVWVHEKAK 281
>gi|327304765|ref|XP_003237074.1| ATP-dependent RNA helicase DBP4 [Trichophyton rubrum CBS 118892]
gi|326460072|gb|EGD85525.1| ATP-dependent RNA helicase DBP4 [Trichophyton rubrum CBS 118892]
Length = 815
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 102/169 (60%), Gaps = 5/169 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ V + I + L++GG ++ + +++ N+L+ TPGR
Sbjct: 125 ALIISPTRELAIQIFEVLRK-IGRYHTFSAGLIIGGKSLQEEQERLGR--MNILVCTPGR 181
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ M++ D N+++LVLDEADR++DMGFQ + I+ LPK R+T LFSATQT+ V
Sbjct: 182 MLQHMDQTAAFDTDNIQMLVLDEADRIMDMGFQSTVDAIVEHLPKERQTMLFSATQTKKV 241
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNV 170
+L++ L++P + V + S + S+ Q TPL L+ +W+
Sbjct: 242 SDLARLSLQDPEYISVHQAASS--ATPSTLQQHYVVTPLPDKLDTLWSF 288
>gi|365984605|ref|XP_003669135.1| hypothetical protein NDAI_0C02320 [Naumovozyma dairenensis CBS 421]
gi|343767903|emb|CCD23892.1| hypothetical protein NDAI_0C02320 [Naumovozyma dairenensis CBS 421]
Length = 764
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 116/186 (62%), Gaps = 7/186 (3%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++ISPTREL+ QIY V I T + + L++GG +VK + +++ + N+LIGTPGR
Sbjct: 116 ALVISPTRELAMQIYEVLLK-IGTYTSLSAGLVIGGKDVKFESERLSK--INILIGTPGR 172
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ +++ L+ NL++LVLDEADR LDMGF+K + I+S LP R+T LFSATQ++++
Sbjct: 173 ILQHLDQAIALNTSNLQMLVLDEADRCLDMGFKKTLDAIVSNLPASRQTLLFSATQSQSL 232
Query: 122 EELSKAGLRNPVRVEVR--AESKSHHVSASSQQLASS--KTPLGLHLEVIWNVNQMRNHH 177
+L++ L + V ++ K+ +A+ + L S +T L L+++++ + H
Sbjct: 233 GDLARLSLTDYKTVGTMDPSKDKTDEGAATPKTLEQSYVETELADKLDILYSFIKSHLKH 292
Query: 178 NLLICL 183
+++ L
Sbjct: 293 KMIVFL 298
>gi|313235774|emb|CBY11224.1| unnamed protein product [Oikopleura dioica]
Length = 658
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 88/142 (61%), Gaps = 3/142 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G+++SPTRELS QIY V + I D + L+ GG V+ + K I + N++I TPGR
Sbjct: 137 GLVLSPTRELSMQIYDVLRK-IGLKHDFSAGLVTGGKSVEEEAKVISK--TNIIIATPGR 193
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L +++ NL+ V+DEADR+LDMGFQ Q+ IIS LP +R+T LFSAT
Sbjct: 194 LCQHLDQTHGFTLDNLKAFVIDEADRMLDMGFQAQVDQIISFLPSIRQTMLFSATLGTQT 253
Query: 122 EELSKAGLRNPVRVEVRAESKS 143
+LS+ L++P V V + SKS
Sbjct: 254 SKLSRLSLKDPKYVNVNSGSKS 275
>gi|330844673|ref|XP_003294242.1| hypothetical protein DICPUDRAFT_159210 [Dictyostelium purpureum]
gi|325075337|gb|EGC29238.1| hypothetical protein DICPUDRAFT_159210 [Dictyostelium purpureum]
Length = 599
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/139 (44%), Positives = 92/139 (66%), Gaps = 3/139 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ QIY VA+ + ++ +GG K + +++E+ G NLL+ TPGRL
Sbjct: 195 IIISPTRELALQIYGVAKELLKYHTQTHGII-IGGAAKKPEEERLEK-GVNLLVATPGRL 252
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++ +NL+ LV+DEADR+L++GF++++ I+ LPK R+T LFSATQT VE
Sbjct: 253 LDHLQNTKGFITKNLKCLVIDEADRILEVGFEEEMHKIVKLLPKNRQTMLFSATQTRKVE 312
Query: 123 ELSKAGLRN-PVRVEVRAE 140
+++K L N PV V V E
Sbjct: 313 DIAKVSLNNSPVYVGVDDE 331
>gi|351711157|gb|EHB14076.1| Putative ATP-dependent RNA helicase DDX10 [Heterocephalus glaber]
Length = 692
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 145 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERIN--NINILVCTPGRL 201
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL++LVLDEADR+LDMGF ++ II +PK R+T LFSATQT++V+
Sbjct: 202 LQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENIPKKRQTLLFSATQTKSVK 261
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L+NP V V ++K
Sbjct: 262 DLARLSLKNPEYVWVHEKAK 281
>gi|312075996|ref|XP_003140664.1| hypothetical protein LOAG_05079 [Loa loa]
Length = 549
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 88/140 (62%), Gaps = 7/140 (5%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++I P+REL+ Q+ V + F LP V +++GG + K D K ++ A ++I TPGR
Sbjct: 56 AVVIVPSRELAKQVGAVCKLFADALP-VSMRVMIGGKKGKCDSKIVQSLNAAVIIATPGR 114
Query: 62 LYDIMERMDVLDFRN----LEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQ 117
L ++ LDF+ LEIL++DEADR D F+ ++ I+ LPK RRTGLFSATQ
Sbjct: 115 LQSLISSN--LDFKKALKALEILIIDEADRYTDSNFKASMTEILESLPKQRRTGLFSATQ 172
Query: 118 TEAVEELSKAGLRNPVRVEV 137
+ +EE+ K GLRNP ++ +
Sbjct: 173 AKEMEEIVKFGLRNPTQITI 192
>gi|395520365|ref|XP_003764305.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 [Sarcophilus
harrisii]
Length = 457
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 93/140 (66%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG +++ + ++I + N+LI TPGRL
Sbjct: 77 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLRHESERINQ--INILICTPGRL 133
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL++LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 134 LQHMDETTYFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 193
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L++P V V ++K
Sbjct: 194 DLARLSLKDPEYVWVHEKAK 213
>gi|393909954|gb|EFO23405.2| hypothetical protein LOAG_05079 [Loa loa]
Length = 486
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 88/140 (62%), Gaps = 7/140 (5%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++I P+REL+ Q+ V + F LP V +++GG + K D K ++ A ++I TPGR
Sbjct: 56 AVVIVPSRELAKQVGAVCKLFADALP-VSMRVMIGGKKGKCDSKIVQSLNAAVIIATPGR 114
Query: 62 LYDIMERMDVLDFRN----LEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQ 117
L ++ LDF+ LEIL++DEADR D F+ ++ I+ LPK RRTGLFSATQ
Sbjct: 115 LQSLISSN--LDFKKALKALEILIIDEADRYTDSNFKASMTEILESLPKQRRTGLFSATQ 172
Query: 118 TEAVEELSKAGLRNPVRVEV 137
+ +EE+ K GLRNP ++ +
Sbjct: 173 AKEMEEIVKFGLRNPTQITI 192
>gi|392895997|ref|NP_001254980.1| Protein ZK512.2, isoform a [Caenorhabditis elegans]
gi|1353121|sp|P34640.2|DDX55_CAEEL RecName: Full=Probable ATP-dependent RNA helicase DDX55 homolog;
AltName: Full=DEAD box protein 55
gi|3881691|emb|CAA80151.1| Protein ZK512.2, isoform a [Caenorhabditis elegans]
Length = 578
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 90/145 (62%), Gaps = 4/145 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+SP+REL SQI V QPF L ++ + GG +V ++K + + N+L+ TPGR
Sbjct: 83 ALILSPSRELCSQIVSVIQPFAEKL-NLTVETVTGGQKVDKNIKMFKNKNVNILVATPGR 141
Query: 62 LYDIMERMDVL---DFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQT 118
L+ I++ L R L++LV+DEADR ++ F+ + I+S +PK RRTGLFSATQ
Sbjct: 142 LFQIIQHEKTLIARKMRTLQLLVIDEADRFNEIQFEDHMREILSCIPKQRRTGLFSATQV 201
Query: 119 EAVEELSKAGLRNPVRVEVRAESKS 143
+ ++L GLRN +V+V E S
Sbjct: 202 KEEDDLMVFGLRNAKQVKVAQERNS 226
>gi|315645365|ref|ZP_07898490.1| DEAD/DEAH box helicase domain protein [Paenibacillus vortex V453]
gi|315279407|gb|EFU42713.1| DEAD/DEAH box helicase domain protein [Paenibacillus vortex V453]
Length = 506
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 91/136 (66%), Gaps = 3/136 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+++SPTREL+ QI + + S ++S +VGGV K + +++ GA++LI TPGR
Sbjct: 94 ALVLSPTRELALQISDNVKAY-SQFTKLRSTAIVGGVSQKTQERALQQ-GADILIATPGR 151
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D+M + + D +++EILVLDEADR+LDMGF + IIS++P ++T FSAT +
Sbjct: 152 LLDLMNQKRI-DLQHVEILVLDEADRMLDMGFIHDVKRIISKMPSKKQTLFFSATMPAEI 210
Query: 122 EELSKAGLRNPVRVEV 137
+L K L+NPV+VE+
Sbjct: 211 TQLVKTLLQNPVKVEI 226
>gi|409045888|gb|EKM55368.1| hypothetical protein PHACADRAFT_120692 [Phanerochaete carnosa
HHB-10118-sp]
Length = 681
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 96/165 (58%), Gaps = 32/165 (19%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKS----------------------------VL 33
++ISPTREL++QI+ + + F+ + P + +L
Sbjct: 87 ALVISPTRELANQIHSIFELFLQSQPSAQHSHPTSPAQSDGDESGGLPESRWEFPPPLLL 146
Query: 34 LVGGVEVKADVKKIEEEGANLLIGTPGRLYDIM--ERMDVLDFRNLEILVLDEADRLLDM 91
+ G D+++ GA++++GTPGR+ + + + V++ + LEILVLDEADRLLD+
Sbjct: 147 VSSGSSPAQDLQRFMSTGADIVVGTPGRVEEFLLGKGNSVVNVKELEILVLDEADRLLDL 206
Query: 92 GFQKQISYIISRLPKLRRTGLFSATQT--EAVEELSKAGLRNPVR 134
GF + ++ I++ LPK RRTGLFSAT T +AV EL + GLRNP R
Sbjct: 207 GFNQTLTRILTHLPKQRRTGLFSATMTDADAVSELVRVGLRNPAR 251
>gi|392895999|ref|NP_001254981.1| Protein ZK512.2, isoform b [Caenorhabditis elegans]
gi|371570785|emb|CCF23444.1| Protein ZK512.2, isoform b [Caenorhabditis elegans]
Length = 512
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 90/145 (62%), Gaps = 4/145 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+SP+REL SQI V QPF L ++ + GG +V ++K + + N+L+ TPGR
Sbjct: 17 ALILSPSRELCSQIVSVIQPFAEKL-NLTVETVTGGQKVDKNIKMFKNKNVNILVATPGR 75
Query: 62 LYDIMERMDVL---DFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQT 118
L+ I++ L R L++LV+DEADR ++ F+ + I+S +PK RRTGLFSATQ
Sbjct: 76 LFQIIQHEKTLIARKMRTLQLLVIDEADRFNEIQFEDHMREILSCIPKQRRTGLFSATQV 135
Query: 119 EAVEELSKAGLRNPVRVEVRAESKS 143
+ ++L GLRN +V+V E S
Sbjct: 136 KEEDDLMVFGLRNAKQVKVAQERNS 160
>gi|301764042|ref|XP_002917443.1| PREDICTED: probable ATP-dependent RNA helicase DDX10-like
[Ailuropoda melanoleuca]
Length = 926
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 201 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERIN--NINILVCTPGRL 257
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL++LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 258 LQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 317
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L+NP V V ++K
Sbjct: 318 DLARLSLKNPEYVWVHEKAK 337
>gi|308806782|ref|XP_003080702.1| DEAD/DEAH box helicase, putative (ISS) [Ostreococcus tauri]
gi|116059163|emb|CAL54870.1| DEAD/DEAH box helicase, putative (ISS) [Ostreococcus tauri]
Length = 1423
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 89/131 (67%), Gaps = 3/131 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G++ISPTREL+ QI+ + + + LL+GG +V + ++ + N+L+ TPGR
Sbjct: 777 GIVISPTRELAIQIFQCLT-RVGARHSMSAGLLIGGKDVSEEANRVNK--MNILVCTPGR 833
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + D L++LVLDEADR+LD+GF K ++ II LPK R+T LFSATQT++V
Sbjct: 834 LLQHMDETPLFDCVGLQMLVLDEADRMLDLGFAKTLNAIIENLPKKRQTLLFSATQTKSV 893
Query: 122 EELSKAGLRNP 132
++L++ GL++P
Sbjct: 894 KDLARLGLKDP 904
>gi|440894340|gb|ELR46816.1| Putative ATP-dependent RNA helicase DDX10, partial [Bos grunniens
mutus]
Length = 773
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 145 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERIN--NINILVCTPGRL 201
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL++LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 202 LQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 261
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L+NP V V ++K
Sbjct: 262 DLARLSLKNPEYVWVHEKAK 281
>gi|392597205|gb|EIW86527.1| DEAD-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 562
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 101/151 (66%), Gaps = 4/151 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+SPTREL+ QI+ VA+ ++ V++ GG +A+ +K+++ G NLL+ TPGRL
Sbjct: 99 IIVSPTRELALQIFEVARDLMAYHSQTFGVVM-GGANQRAESEKLQK-GVNLLVATPGRL 156
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP-KLRRTGLFSATQTEAV 121
D ++ FRNL+ LV+DEADR+L++GF++++ IIS LP + R++ LFSATQT V
Sbjct: 157 LDHLQNTKGFVFRNLKALVIDEADRILEVGFEEEMKRIISILPNENRQSMLFSATQTTKV 216
Query: 122 EELSKAGLR-NPVRVEVRAESKSHHVSASSQ 151
+L++ LR P+ ++V E + VS SQ
Sbjct: 217 NDLARMSLRPGPLHIDVDGEETTSTVSTLSQ 247
>gi|348553236|ref|XP_003462433.1| PREDICTED: probable ATP-dependent RNA helicase DDX10-like [Cavia
porcellus]
Length = 988
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 91/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 140 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERIN--NINILVCTPGRL 196
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL++LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 197 LQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 256
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L+NP V V +K
Sbjct: 257 DLARLSLKNPEYVWVHENAK 276
>gi|417405074|gb|JAA49262.1| Putative atp-dependent rna helicase [Desmodus rotundus]
Length = 877
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 145 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERIN--NINILVCTPGRL 201
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL++LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 202 LQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 261
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L+NP V V ++K
Sbjct: 262 DLARLSLKNPEYVWVHEKAK 281
>gi|410612255|ref|ZP_11323335.1| ATP-dependent RNA helicase RhlE [Glaciecola psychrophila 170]
gi|410168256|dbj|GAC37224.1| ATP-dependent RNA helicase RhlE [Glaciecola psychrophila 170]
Length = 410
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 98/154 (63%), Gaps = 10/154 (6%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPD--VKSVLLVGGVEVKADVKKIEEEGANLLIGTP 59
++++PTREL+ Q+Y + F+ + +K + GGV + + +E G ++LI TP
Sbjct: 75 ALVLTPTRELAQQVY---KNFVGYAENTQLKVAVAYGGVSINPQISALER-GVDILIATP 130
Query: 60 GRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTE 119
GRL D++ + +V D L+ +V DEADR+LDMGF+ +I I+SRLP R+T LFSAT +
Sbjct: 131 GRLLDLIAKGNV-DLSQLQTIVFDEADRMLDMGFKDEIDQILSRLPNKRQTLLFSATFDD 189
Query: 120 AVEELSKAGLRNPVRVEVRAESKSHHVSASSQQL 153
A+ +LSK L NPV +EV S+ + +A +QL
Sbjct: 190 AIFKLSKTLLNNPVLIEV---SERNTAAAQVEQL 220
>gi|426244481|ref|XP_004016050.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 [Ovis aries]
Length = 878
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 145 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERIN--NINILVCTPGRL 201
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL++LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 202 LQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 261
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L+NP V V ++K
Sbjct: 262 DLARLSLKNPEYVWVHEKAK 281
>gi|291383932|ref|XP_002708524.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Oryctolagus
cuniculus]
Length = 872
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 145 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERIN--NINILVCTPGRL 201
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL++LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 202 LQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 261
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L+NP V V ++K
Sbjct: 262 DLARLSLKNPEYVWVHEKAK 281
>gi|428166037|gb|EKX35020.1| hypothetical protein GUITHDRAFT_118768 [Guillardia theta CCMP2712]
Length = 668
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 94/154 (61%), Gaps = 15/154 (9%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+II+PTREL+ QI ++ F S+ S VGG ++++ +E G N+LI TPGR
Sbjct: 162 LIIAPTRELALQIESLSAVF-SSHCSFPSHSFVGGSNETNNMRRFKELGGNVLIATPGRF 220
Query: 63 YDIMERMDVLD--------FRNLEILVLDEADRLLDMGFQKQISYIISRLPKLR------ 108
+ + + ++ R+L++LVLDEADRLL MGF++Q++ I S +PK R
Sbjct: 221 IETISKKNLTGKGTSGIDALRSLQLLVLDEADRLLHMGFEQQLTRIFSLIPKQRSFTASD 280
Query: 109 RTGLFSATQTEAVEELSKAGLRNPVRVEVRAESK 142
RTGLFSAT T ++ EL + G+RNP RV V + K
Sbjct: 281 RTGLFSATMTSSLTELVRVGMRNPCRVAVTVKGK 314
>gi|336373599|gb|EGO01937.1| hypothetical protein SERLA73DRAFT_49078 [Serpula lacrymans var.
lacrymans S7.3]
Length = 324
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 87/135 (64%), Gaps = 6/135 (4%)
Query: 20 QPFISTLPDVKSVLLVGGVEVKA--DVKKIEEEGANLLIGTPGRLYDIM--ERMDVLDFR 75
P ST ++++LL+ + D+K+ GA+++IGTPGR+ + + V+ +
Sbjct: 14 NPITSTPKPLEALLLISSDQSSPIQDIKRFLSSGADIIIGTPGRVEEFLLGRGKTVVSSK 73
Query: 76 NLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQT--EAVEELSKAGLRNPV 133
LE+LVLDEADRLLD+GFQ ++ II+ LPK RRTGLFSAT T +A+ EL + GLRNP
Sbjct: 74 ELEVLVLDEADRLLDLGFQNALTRIITHLPKQRRTGLFSATMTDADALSELVRVGLRNPA 133
Query: 134 RVEVRAESKSHHVSA 148
RV V+ ++K S
Sbjct: 134 RVVVKVQTKKSKASG 148
>gi|452845761|gb|EME47694.1| hypothetical protein DOTSEDRAFT_77927 [Dothistroma septosporum
NZE10]
Length = 1056
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 99/150 (66%), Gaps = 4/150 (2%)
Query: 4 IISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLY 63
I+ PTREL+ Q ++VA+ +S D+ + VGG+ +K K+++ +++I TPGR
Sbjct: 607 ILMPTRELALQCFNVAKK-LSAFTDISVAMAVGGLSIKEQDKELKMR-PDIVIATPGRFI 664
Query: 64 DIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVEE 123
D+ LD +EILVLDEADR+L+ GF +++ I+S++PK R+T LFSAT T V++
Sbjct: 665 DLERNYRSLDVGTIEILVLDEADRMLEEGFADELNEILSKIPKSRQTMLFSATMTTKVDD 724
Query: 124 LSKAGLRNPVRVEVRAESKSHHVSASSQQL 153
L ++GL+ PVR+ V A+ ++ VS +Q+
Sbjct: 725 LVRSGLQRPVRLMVDAQKQT--VSGLTQEF 752
>gi|410971865|ref|XP_004001580.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX10 [Felis catus]
Length = 881
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 145 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERIN--NINILVCTPGRL 201
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL++LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 202 LQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 261
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L+NP V V ++K
Sbjct: 262 DLARLSLKNPEYVWVHEKAK 281
>gi|356553180|ref|XP_003544936.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 32-like [Glycine
max]
Length = 743
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 106/168 (63%), Gaps = 4/168 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ Q++ V + + + + LL+GG + D++K N+LI TPGR
Sbjct: 141 SIIISPTRELAGQLFDVLK-VVGKHHNFSAGLLIGGRK-DVDMEKERVNELNILICTPGR 198
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ D +++LVLDEADR+LD GF+K+++ IIS+LPK R+T LFSATQT+++
Sbjct: 199 LLQHMDETPNFDCSQMQVLVLDEADRILDSGFKKELNAIISQLPKRRQTLLFSATQTKSI 258
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWN 169
++L++ L++P + V ES + + Q + PL L+++W+
Sbjct: 259 QDLARLSLKDPEYLSVHEESVTSTPTLLKQIVMI--VPLEQKLDMLWS 304
>gi|66812114|ref|XP_640236.1| hypothetical protein DDB_G0282741 [Dictyostelium discoideum AX4]
gi|74897113|sp|Q54S03.1|DDX18_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx18; AltName:
Full=DEAD box protein 18
gi|60468220|gb|EAL66230.1| hypothetical protein DDB_G0282741 [Dictyostelium discoideum AX4]
Length = 602
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 93/139 (66%), Gaps = 3/139 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ QIY VA+ + ++ +GG K + +++E+ G NLL+ TPGRL
Sbjct: 195 IIISPTRELALQIYGVARELMKYHTQTHGIV-IGGASKKPEEERLEK-GVNLLVATPGRL 252
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++ +NL+ L++DEADR+L++GF++++ II ++PK R+T LFSATQT V+
Sbjct: 253 LDHLQNTKGFITKNLKCLIIDEADRILEVGFEEEMHQIIKKVPKTRQTMLFSATQTRKVD 312
Query: 123 ELSKAGLRN-PVRVEVRAE 140
+++K L N PV V V E
Sbjct: 313 DIAKVSLNNSPVYVGVDDE 331
>gi|358056053|dbj|GAA98398.1| hypothetical protein E5Q_05084 [Mixia osmundae IAM 14324]
Length = 795
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 103/166 (62%), Gaps = 8/166 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++ISPTREL+ QI+ V + I T + L++GG + + +++ N+L+ TPGR
Sbjct: 129 ALVISPTRELAVQIFEVLRK-IGTQHSFSAGLVIGGKSLHEEKERLAR--MNILVATPGR 185
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M++ D NL++LVLDEADR+LDMGF K ++ I++ LP R+T LFSATQT+ V
Sbjct: 186 LLQHMDQTIGFDADNLQLLVLDEADRILDMGFSKSLNAIVANLPPTRQTLLFSATQTKNV 245
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSA-----SSQQLASSKTPLGL 162
++L++ L++P V R + V A +S+ A+ + P+GL
Sbjct: 246 KDLARLSLKDPEYVYARTLTADPAVGAQPVAEASRDEATLQVPVGL 291
>gi|328853252|gb|EGG02392.1| hypothetical protein MELLADRAFT_75483 [Melampsora larici-populina
98AG31]
Length = 486
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 89/140 (63%), Gaps = 2/140 (1%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+++PTREL+ QI ST+ VK+V++VGG+++ + + + ++++ TPG
Sbjct: 129 FACVLAPTRELAYQISQQFDALGSTI-GVKTVVIVGGMDMMSQAIALSKR-PHVIVATPG 186
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL+D +E RNL+ L++DEADRLLDM F I I+ +PK R+T LFSAT T
Sbjct: 187 RLHDHLEHTKGFSLRNLQFLIMDEADRLLDMDFGPVIDKILKVIPKERKTYLFSATMTTK 246
Query: 121 VEELSKAGLRNPVRVEVRAE 140
V +L +A L NPV+VEV A+
Sbjct: 247 VAKLQRASLNNPVKVEVSAK 266
>gi|326474340|gb|EGD98349.1| ATP-dependent rRNA helicase spb4 [Trichophyton tonsurans CBS
112818]
Length = 656
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 109/210 (51%), Gaps = 52/210 (24%)
Query: 2 GMIISPTRELSSQIYHV-----------------------------AQPFISTLPDVKSV 32
+I+SPTREL+ QI+ V +P+ S+ V
Sbjct: 90 AIIVSPTRELAEQIHSVLHSLLAFHGPSASKLAQLDGKEPQLDPETGKPYRSSTLTVIPQ 149
Query: 33 LLVGGVEVKA-DVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLD 90
LL+GG A D+ + NLLI TPGRL +++ V + E+LVLDEADRLLD
Sbjct: 150 LLLGGTTTPAQDLSVFLKHSPNLLISTPGRLLELLSSPHVHCPQSSFEVLVLDEADRLLD 209
Query: 91 MGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVR-----AESK--- 142
+GF+ + I++RLPK RRTGLFSA+ EAV+++ + GLRNPV++ V+ AE K
Sbjct: 210 LGFKDDLQKILARLPKQRRTGLFSASVNEAVDQIVRVGLRNPVKIAVKVRGAGAEDKRTP 269
Query: 143 ------------SHHVSASSQQLAS-SKTP 159
SH + A S+ L+S S TP
Sbjct: 270 ASLQMTYLATRPSHRIPALSKLLSSISPTP 299
>gi|73955178|ref|XP_536583.2| PREDICTED: probable ATP-dependent RNA helicase DDX10 [Canis lupus
familiaris]
Length = 871
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 145 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERIN--NINILVCTPGRL 201
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL++LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 202 LQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 261
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L+NP + V ++K
Sbjct: 262 DLARLSLKNPEYIWVHEKAK 281
>gi|302506493|ref|XP_003015203.1| hypothetical protein ARB_06326 [Arthroderma benhamiae CBS 112371]
gi|291178775|gb|EFE34563.1| hypothetical protein ARB_06326 [Arthroderma benhamiae CBS 112371]
Length = 816
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 102/169 (60%), Gaps = 5/169 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ V + I + L++GG ++ + +++ N+L+ TPGR
Sbjct: 125 ALIISPTRELAIQIFEVLRK-IGRYHTFSAGLVIGGKSLQEEQERLGR--MNILVCTPGR 181
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ M++ D N+++LVLDEADR++DMGFQ + I+ LPK R+T LFSATQT+ V
Sbjct: 182 MLQHMDQTAAFDTDNIQMLVLDEADRIMDMGFQSTVDAIVEHLPKERQTMLFSATQTKKV 241
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNV 170
+L++ L++P + V + S + S+ Q TPL L+ +W+
Sbjct: 242 SDLARLSLQDPEYISVHQTASS--ATPSTLQQHYVVTPLPDKLDTLWSF 288
>gi|302412969|ref|XP_003004317.1| ATP-dependent rRNA helicase SPB4 [Verticillium albo-atrum VaMs.102]
gi|261356893|gb|EEY19321.1| ATP-dependent rRNA helicase SPB4 [Verticillium albo-atrum VaMs.102]
Length = 425
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 93/164 (56%), Gaps = 23/164 (14%)
Query: 1 MGMIISPTRELSSQIYHVAQ-------------PFI--------STLPDVKSVLLVGGVE 39
+I+SPTREL+ QIY+V PF+ S +P LLVGG
Sbjct: 83 FAIIVSPTRELAQQIYNVLMGLIAFHTASSEMLPFLKEDDKRPDSAVPIAVPQLLVGGTT 142
Query: 40 V-KADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQI 97
+ D+ N+L+ TPGRL +++ V ++LVLDEADR+LDMGF++ +
Sbjct: 143 TTQQDLSFFVRHSPNILVSTPGRLVELLASPHVHCSQSTFDMLVLDEADRILDMGFRQDL 202
Query: 98 SYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAES 141
I+S LPK RRTGLFSA+ +EAV ++ GLRNPV++ V +S
Sbjct: 203 QRILSHLPKQRRTGLFSASVSEAVSQIITVGLRNPVKIAVGVKS 246
>gi|116003979|ref|NP_001070349.1| probable ATP-dependent RNA helicase DDX10 [Bos taurus]
gi|115305270|gb|AAI23580.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Bos taurus]
gi|296480316|tpg|DAA22431.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Bos taurus]
Length = 876
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 145 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERIN--NINILVCTPGRL 201
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL++LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 202 LQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 261
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L+NP V V ++K
Sbjct: 262 DLARLSLKNPEYVWVHEKAK 281
>gi|298705993|emb|CBJ29114.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 644
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/138 (46%), Positives = 95/138 (68%), Gaps = 5/138 (3%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSV--LLVGGVEVKADVKKIEEEGANLLIGTPG 60
+IISPTRELS Q Y V + I ++K LL+GG +A+ +++ + G N+L+ TPG
Sbjct: 223 IIISPTRELSLQTYGVLRDVIEN-GNLKQTHGLLIGGANRRAEAERLVK-GVNVLVVTPG 280
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D ++ FRN+++LV+DEADR+L+ GF++++ II LPK R+T LFSATQT+
Sbjct: 281 RLLDHLQNTKGFLFRNMQMLVIDEADRILEQGFEEEMHQIIKLLPKERQTMLFSATQTKK 340
Query: 121 VEELSKAGLRN-PVRVEV 137
VE+L++ +RN PV V V
Sbjct: 341 VEDLARLSIRNKPVYVGV 358
>gi|145300612|ref|YP_001143453.1| ATP-dependent RNA helicase DbpA [Aeromonas salmonicida subsp.
salmonicida A449]
gi|418361214|ref|ZP_12961870.1| ATP-dependent RNA helicase DbpA [Aeromonas salmonicida subsp.
salmonicida 01-B526]
gi|142853384|gb|ABO91705.1| ATP-dependent RNA helicase DbpA [Aeromonas salmonicida subsp.
salmonicida A449]
gi|356687572|gb|EHI52153.1| ATP-dependent RNA helicase DbpA [Aeromonas salmonicida subsp.
salmonicida 01-B526]
Length = 459
Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 104/181 (57%), Gaps = 8/181 (4%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+ Q+ + LP+VK V L GG + + GA++ +GTPGR+
Sbjct: 76 LVLCPTRELADQVAQEIRRLARALPNVKLVTLCGGTQTAPQSATLGF-GAHIAVGTPGRI 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+E+ L+ L+ LVLDEADR+LDMGF ++I+ +IS P+ R+T LFSAT E +
Sbjct: 135 LKHLEQ-GTLELSGLKTLVLDEADRMLDMGFGEEINRVISYAPEQRQTLLFSATYPEGIA 193
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVI-WNVNQMRNHHNLLI 181
++S+ RNPV V V + H SA Q+L + P G L+ + W ++ + ++
Sbjct: 194 QMSRGVQRNPVEVSVES---LHEGSAIEQKL--YEVPAGQRLDALTWLLSHYQPASCVVF 248
Query: 182 C 182
C
Sbjct: 249 C 249
>gi|115391509|ref|XP_001213259.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|121739311|sp|Q0CQF3.1|SPB4_ASPTN RecName: Full=ATP-dependent rRNA helicase spb4
gi|114194183|gb|EAU35883.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 639
Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 95/168 (56%), Gaps = 26/168 (15%)
Query: 2 GMIISPTRELSSQIYHVAQPFI-------------------------STLPDVKSVLLVG 36
+IISPTREL+SQI+ V + STL V +LL G
Sbjct: 90 AIIISPTRELASQIHQVLLSLLAFHPPSAAAIKPPGEDDAPREKFSASTLKVVPQLLLGG 149
Query: 37 GVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQK 95
D+ + N+LI TPGRL +++ V + E+LVLDEADRLLD+GF++
Sbjct: 150 STTPAEDLSYFLKHSPNVLISTPGRLLELLSSPHVHCPQSSFEMLVLDEADRLLDLGFKE 209
Query: 96 QISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKS 143
+ I+ RLPK RRTGLFSA+ +EAV+++ + GLRNPV+V V+ + S
Sbjct: 210 TLQNILRRLPKQRRTGLFSASISEAVDQIVRVGLRNPVKVLVKVKGTS 257
>gi|241955319|ref|XP_002420380.1| ATP-dependent rRNA helicase, putative; ribosomal biogenesis
protein, putative [Candida dubliniensis CD36]
gi|223643722|emb|CAX41458.1| ATP-dependent rRNA helicase, putative [Candida dubliniensis CD36]
Length = 635
Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 101/167 (60%), Gaps = 11/167 (6%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPD----------VKSVLLVGGV-EVKADVKKIEE 49
+ +++SPTREL++QI V + LP+ + + LLVG + V+ D+ + +
Sbjct: 95 LSIVLSPTRELANQIQTVFNQVLQYLPEDDNYNNKSRRIGTQLLVGSIGNVRDDLNQFLQ 154
Query: 50 EGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRR 109
++LIGTPGR+ + + + +LEI++LDEAD+LLD F+K + I+ +LPK RR
Sbjct: 155 NQPHILIGTPGRILEFLGSSQSIKTSSLEIVILDEADKLLDFSFEKDVINILKKLPKQRR 214
Query: 110 TGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASS 156
TGLFSAT + A + + G+ NPV+V+V++++ S S + L S
Sbjct: 215 TGLFSATISSAGNTIFRTGMNNPVKVQVKSKNYLGEQSNSPKSLQLS 261
>gi|26337015|dbj|BAC32191.1| unnamed protein product [Mus musculus]
Length = 462
Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 145 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERIN--NINILVCTPGRL 201
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL++LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 202 LQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 261
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L++P V V ++K
Sbjct: 262 DLARLSLKDPEYVWVHEKAK 281
>gi|125983072|ref|XP_001355301.1| GA19139 [Drosophila pseudoobscura pseudoobscura]
gi|54643615|gb|EAL32358.1| GA19139 [Drosophila pseudoobscura pseudoobscura]
Length = 838
Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 88/134 (65%), Gaps = 3/134 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ + + D + L++GG +K + ++++ N+LI TPGR
Sbjct: 139 AIIISPTRELAYQIFETLKK-VGKHHDFSAGLIIGGKNLKFERTRMDQ--CNILICTPGR 195
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + + ++E+LVLDEADR LDMGFQK ++ II P R+T LFSATQT V
Sbjct: 196 LLQHMDENPLFNTSSMEVLVLDEADRCLDMGFQKTLNSIIENFPPERQTLLFSATQTNTV 255
Query: 122 EELSKAGLRNPVRV 135
++L++ L++PV V
Sbjct: 256 QDLARLNLKDPVYV 269
>gi|149910882|ref|ZP_01899514.1| ATP-dependent RNA helicase, DEAD box family [Moritella sp. PE36]
gi|149806036|gb|EDM66019.1| ATP-dependent RNA helicase, DEAD box family [Moritella sp. PE36]
Length = 397
Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 105/164 (64%), Gaps = 5/164 (3%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL+SQI + L +K+ ++ GGV + V I G ++L+ TPGRL
Sbjct: 79 LILTPTRELASQIMQNIDDYADGL-GLKTKVVYGGVGRQNQVDSIAL-GLDILVATPGRL 136
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D++ + D ++F+ LE+ VLDEAD +LDMGF K + IIS+LPK R+T LFSAT +E
Sbjct: 137 LDLI-KTDDINFKALEVFVLDEADTMLDMGFFKDVQRIISKLPKNRQTLLFSATMPAEIE 195
Query: 123 ELSKAGLRNPVRVEVRAESKS-HHVSASSQQL-ASSKTPLGLHL 164
L+ A L +P ++++ AE+ + ++ S L S+K PL L++
Sbjct: 196 ILADAILTDPTKIQITAETVTIERINQSVYHLEKSNKVPLLLNI 239
>gi|389746269|gb|EIM87449.1| DEAD-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 817
Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 112/193 (58%), Gaps = 14/193 (7%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ V + I + L++GG +K + ++ N+L+ TPGR
Sbjct: 128 ALIISPTRELAVQIFEVLRS-IGGYHSFSAGLVIGGKNLKDERDRLSR--MNILVATPGR 184
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M++ + NL++LVLDEADR+LDMGF + ++ ++S LPK R+T LFSATQT++V
Sbjct: 185 LLQHMDQTVGFESDNLQLLVLDEADRILDMGFSRTLTALLSHLPKSRQTLLFSATQTKSV 244
Query: 122 EELSKAGLRNPVRVEVR---AESKSHHVSASSQQLASSK--------TPLGLHLEVIWNV 170
+L++ L++PV V ++S + + + LA K +PL L ++W+
Sbjct: 245 ADLARLSLKDPVFVSAHSQPSDSPETDAATNDKHLAIPKGLEQHYIISPLPKKLSILWSF 304
Query: 171 NQMRNHHNLLICL 183
+ +L+ +
Sbjct: 305 IKTHLQSKILVFM 317
>gi|195173749|ref|XP_002027649.1| GL15986 [Drosophila persimilis]
gi|194114584|gb|EDW36627.1| GL15986 [Drosophila persimilis]
Length = 838
Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 88/134 (65%), Gaps = 3/134 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ + + D + L++GG +K + ++++ N+LI TPGR
Sbjct: 139 AIIISPTRELAYQIFETLKK-VGKHHDFSAGLIIGGKNLKFERTRMDQ--CNILICTPGR 195
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + + ++E+LVLDEADR LDMGFQK ++ II P R+T LFSATQT V
Sbjct: 196 LLQHMDENPLFNTSSMEVLVLDEADRCLDMGFQKTLNSIIENFPPERQTLLFSATQTNTV 255
Query: 122 EELSKAGLRNPVRV 135
++L++ L++PV V
Sbjct: 256 QDLARLNLKDPVYV 269
>gi|195399371|ref|XP_002058294.1| GJ15571 [Drosophila virilis]
gi|194150718|gb|EDW66402.1| GJ15571 [Drosophila virilis]
Length = 531
Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 88/134 (65%), Gaps = 3/134 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ + I D + L++GG +K + ++++ N+LI TPGR
Sbjct: 141 AIIISPTRELAYQIFETLKR-IGKHHDFSAGLIIGGKNLKFERTRMDQ--CNILICTPGR 197
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + + ++E+LVLDEADR LDMGFQK ++ II P R+T LFSATQT +
Sbjct: 198 LLQHMDENPLFNTTSMEMLVLDEADRCLDMGFQKTLNSIIENFPPDRQTLLFSATQTNTL 257
Query: 122 EELSKAGLRNPVRV 135
E+L++ L++PV V
Sbjct: 258 EDLARLNLKDPVYV 271
>gi|449330004|gb|AGE96270.1| ATP-dependent RNA helicase [Encephalitozoon cuniculi]
Length = 462
Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 94/135 (69%), Gaps = 7/135 (5%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++I+PTREL+ QI VA F DVK +GG+ ++ D K+++EE ++ +GTPGRL
Sbjct: 79 VVITPTRELALQIREVAGLF-----DVKCECFIGGMSIEEDYKRMKEE-FSIAVGTPGRL 132
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+I+ + + F +L LVLDEAD+LL GF++++ ++++LP+ R TGLFSAT ++V+
Sbjct: 133 LEIVGK-ETKKFSSLSHLVLDEADKLLGFGFEEKLMQLLAKLPRNRVTGLFSATINDSVD 191
Query: 123 ELSKAGLRNPVRVEV 137
+LS+ LRNPV + V
Sbjct: 192 KLSRVFLRNPVSINV 206
>gi|402221225|gb|EJU01294.1| DEAD-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 813
Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 98/156 (62%), Gaps = 12/156 (7%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ QI+ V + + + L++GG V+ + +++ N+L+ TPGRL
Sbjct: 132 LIISPTRELAMQIFEVLRS-VGQYHSFSAGLVIGGKNVRDEQERLTR--MNILVATPGRL 188
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M++ NL+ILVLDEADR+LDMGF I+ II+ LPK R+T LFSATQT++V+
Sbjct: 189 LQHMDQTAGFATDNLQILVLDEADRILDMGFSHTINAIIANLPKTRQTLLFSATQTQSVK 248
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKT 158
+L++ L++P V VR + Q+LA+ K
Sbjct: 249 DLARLSLKDPEFVSVR---------EAGQELATPKN 275
>gi|302837105|ref|XP_002950112.1| hypothetical protein VOLCADRAFT_60063 [Volvox carteri f.
nagariensis]
gi|300264585|gb|EFJ48780.1| hypothetical protein VOLCADRAFT_60063 [Volvox carteri f.
nagariensis]
Length = 624
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 102/168 (60%), Gaps = 5/168 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++++PTREL+ QI+ Q + D+ + LL+GG V+ +V ++ N+L+ TPGR
Sbjct: 143 ALVLTPTRELAVQIFEQLQK-VGHFHDLSAGLLIGGKNVQEEVLRVS--AMNILVCTPGR 199
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ D +L++LVLDEADR+LDMGF + I++ LP+ R+T LFSATQT++V
Sbjct: 200 LLQHMDETPGFDTSSLQLLVLDEADRILDMGFAATMDAIVANLPRERQTMLFSATQTKSV 259
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWN 169
+L++ L P + V AE+ + + Q A LG ++V+W+
Sbjct: 260 RDLARLSLTQPEYLAVHAEAAAP--TPVKLQQAYMVVELGQKMDVLWS 305
>gi|270158633|ref|ZP_06187290.1| ATP-independent RNA helicase DbpA [Legionella longbeachae D-4968]
gi|289166549|ref|YP_003456687.1| ATP-dependent RNA helicase [Legionella longbeachae NSW150]
gi|269990658|gb|EEZ96912.1| ATP-independent RNA helicase DbpA [Legionella longbeachae D-4968]
gi|288859722|emb|CBJ13695.1| putative ATP-dependent RNA helicase [Legionella longbeachae NSW150]
Length = 470
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 89/141 (63%), Gaps = 4/141 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G+++ PTREL+ Q+ + +P+VK + L GG+ +K + + GA+L++GTPGR
Sbjct: 82 GLVLCPTRELAEQVSQAIRRLACLMPNVKIINLSGGIPMKPQLDSLRH-GAHLIVGTPGR 140
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ ++ LD L+ LVLDEADR+LDMGF + IIS PK R+T LFSAT E +
Sbjct: 141 ILKHLKN-GSLDLSQLKALVLDEADRMLDMGFFDDMKSIISVCPKQRQTLLFSATYPEEI 199
Query: 122 EELSKAGLRNP--VRVEVRAE 140
+++SK + NP +RVE AE
Sbjct: 200 KQISKQFMNNPQEIRVESPAE 220
>gi|451848323|gb|EMD61629.1| hypothetical protein COCSADRAFT_148556 [Cochliobolus sativus
ND90Pr]
Length = 813
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 105/182 (57%), Gaps = 5/182 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+SPTREL+ QI+ V + + LL+GG ++A+ + + + N+L+ TPGR
Sbjct: 125 ALILSPTRELAIQIFDVLRKIGRHGHMFAAGLLIGGKSLQAEREALTK--MNILVATPGR 182
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ + + + +L++LVLDEADR+LDMGFQ+ + II LPK R+T LFSATQ++ V
Sbjct: 183 MLQHLSQTAAFNVDDLKMLVLDEADRILDMGFQRDVDAIIEYLPKERQTLLFSATQSKKV 242
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNHHNLLI 181
+L++ L++P V V AE K+ +Q PL L+ +W+ Q +L
Sbjct: 243 SDLARLSLQDPEYVSVHAEDKTATPKGLTQNYII--CPLEEKLDTLWSFIQSSKKSKIL- 299
Query: 182 CL 183
C
Sbjct: 300 CF 301
>gi|393218838|gb|EJD04326.1| DEAD-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 540
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 102/151 (67%), Gaps = 4/151 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+SPTREL+ QI+ VA+ ++ ++ +GG KA+ +K+ + G NL++ TPGRL
Sbjct: 95 IILSPTRELALQIFGVAKELMAYHSQTFGIV-IGGANRKAEAEKLVK-GVNLVVATPGRL 152
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP-KLRRTGLFSATQTEAV 121
D +E FRNL+ LV+DEADR+L++GF++++ IIS LP + R++ LFSATQT V
Sbjct: 153 LDHLENTKGFVFRNLKALVIDEADRILEIGFEEEMKKIISILPNENRQSMLFSATQTTKV 212
Query: 122 EELSKAGLR-NPVRVEVRAESKSHHVSASSQ 151
++L++ LR P+ ++V E ++ VS SQ
Sbjct: 213 QDLARISLRPGPLHIDVDKEEETSTVSTLSQ 243
>gi|302665680|ref|XP_003024449.1| hypothetical protein TRV_01412 [Trichophyton verrucosum HKI 0517]
gi|291188502|gb|EFE43838.1| hypothetical protein TRV_01412 [Trichophyton verrucosum HKI 0517]
Length = 816
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 102/168 (60%), Gaps = 5/168 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ V + I + L++GG ++ + +++ N+L+ TPGR
Sbjct: 125 ALIISPTRELAIQIFEVLRK-IGRYHTFSAGLVIGGKSLQEEQERLGR--MNILVCTPGR 181
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ M++ D N+++LVLDEADR++DMGFQ + I+ LPK R+T LFSATQT+ V
Sbjct: 182 MLQHMDQTAAFDTGNIQMLVLDEADRIMDMGFQSTVDAIVEHLPKERQTMLFSATQTKKV 241
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWN 169
+L++ L++P + V + S + S+ Q TPL L+ +W+
Sbjct: 242 SDLARLSLQDPEYISVHQTASS--ATPSTLQQHYVVTPLPDKLDTLWS 287
>gi|404451050|ref|ZP_11016024.1| DNA/RNA helicase [Indibacter alkaliphilus LW1]
gi|403763343|gb|EJZ24311.1| DNA/RNA helicase [Indibacter alkaliphilus LW1]
Length = 377
Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 104/165 (63%), Gaps = 6/165 (3%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLP-DVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II PTREL++Q+ V + F LP VKS + GGV + + K+ G ++L+ TPGR
Sbjct: 77 LIIVPTRELAAQVEEVIRMFGKFLPRKVKSNAVFGGVSINPQMIKLN--GTDILVATPGR 134
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D++ R + + +L+ LVLDEAD++L++GF+ ++ I+SRLPK R+ LFSAT ++V
Sbjct: 135 LLDLIAR-NAISISDLKTLVLDEADKVLNLGFKAELDEILSRLPKKRQNLLFSATMEDSV 193
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLAS--SKTPLGLHL 164
+L L+NPV++EV+ E + + + L + K PL HL
Sbjct: 194 GQLIDRLLQNPVKIEVKPEEITPELINQTAYLVAQEKKGPLLRHL 238
>gi|116199999|ref|XP_001225811.1| hypothetical protein CHGG_08155 [Chaetomium globosum CBS 148.51]
gi|118574055|sp|Q2GV49.1|SPB4_CHAGB RecName: Full=ATP-dependent rRNA helicase SPB4
gi|88179434|gb|EAQ86902.1| hypothetical protein CHGG_08155 [Chaetomium globosum CBS 148.51]
Length = 646
Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 94/163 (57%), Gaps = 23/163 (14%)
Query: 2 GMIISPTRELSSQIYHVAQPFI---------------------STLPDVKSVLLVGGVEV 40
+IISPTREL+SQIY+V F+ +T P V LLVGG
Sbjct: 91 AIIISPTRELASQIYNVLVSFLKFHAPSAHLLPHAKGDEKRPATTEPVVVPQLLVGGTTK 150
Query: 41 KA-DVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQIS 98
A D+ N+LIGTPGRL +++ V + E+LV+DEADRLLD+GF ++++
Sbjct: 151 AAEDLSTFLRLSPNILIGTPGRLAELLSTPYVKAPSSSFEVLVMDEADRLLDLGFSQELT 210
Query: 99 YIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAES 141
I+ LPK RRTGLFSA+ +EAVE L GL P ++ VR +S
Sbjct: 211 RILGYLPKQRRTGLFSASLSEAVERLITVGLLYPHKITVRVKS 253
>gi|160331560|ref|XP_001712487.1| has1 [Hemiselmis andersenii]
gi|159765935|gb|ABW98162.1| has1 [Hemiselmis andersenii]
Length = 477
Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 96/157 (61%), Gaps = 3/157 (1%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTRELS Q Y+V + + V++ GG K +++K+E+E +L+ TPGR
Sbjct: 112 ALIITPTRELSLQNYYVLKDLLKYHSFSHGVVM-GGANKKTEIEKLEKE-TTILVATPGR 169
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D ++ L F+NL+ L++DEADR L++GF+++I I+ LPK R+T LFSATQT +
Sbjct: 170 LLDHLKTTKNLKFQNLQFLIIDEADRCLEIGFEEEIVAIVKLLPKKRQTVLFSATQTRNI 229
Query: 122 EELSKAGL-RNPVRVEVRAESKSHHVSASSQQLASSK 157
+ LS+ + PV +E++ ++ + Q K
Sbjct: 230 QSLSRISFQKTPVLLEIKENTREKIIENIDQGFVICK 266
>gi|344287857|ref|XP_003415668.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 [Loxodonta
africana]
Length = 873
Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 145 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERIN--NINILVCTPGRL 201
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL++LVLDEADR+LDMGF ++ +I LPK R+T LFSATQT++V+
Sbjct: 202 LQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSATQTKSVK 261
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L+NP V V ++K
Sbjct: 262 DLARLSLKNPEYVWVHEKAK 281
>gi|255079320|ref|XP_002503240.1| predicted protein [Micromonas sp. RCC299]
gi|226518506|gb|ACO64498.1| predicted protein [Micromonas sp. RCC299]
Length = 770
Score = 108 bits (271), Expect = 7e-22, Method: Composition-based stats.
Identities = 67/170 (39%), Positives = 107/170 (62%), Gaps = 10/170 (5%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLP--DVKSVLLVGGVEVKADVKKIEEEGANLLIGTP 59
G+II+PTREL++QI+ Q ++ + + LL+GG VK + + NLL+ TP
Sbjct: 158 GLIIAPTRELATQIF---QQLVAAGKHHSLSAGLLIGGKNVKEEKDTVNR--MNLLVCTP 212
Query: 60 GRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKL-RRTGLFSATQT 118
GRL M+ + D +L++LVLDEADR+LD+GF++ ++ I+ LPK R+T LFSATQT
Sbjct: 213 GRLLQHMDETPMFDCVSLKVLVLDEADRILDLGFRETLTAILENLPKKGRQTLLFSATQT 272
Query: 119 EAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIW 168
++V++L++ +R+P + V AES SQ +A+ + L +E +W
Sbjct: 273 KSVKDLARLSMRDPEYLAVHAESAHATPPKLSQMVATCE--LDKKMETMW 320
>gi|410630699|ref|ZP_11341386.1| ATP-dependent RNA helicase RhlE [Glaciecola arctica BSs20135]
gi|410149665|dbj|GAC18253.1| ATP-dependent RNA helicase RhlE [Glaciecola arctica BSs20135]
Length = 410
Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/138 (44%), Positives = 90/138 (65%), Gaps = 7/138 (5%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLV--GGVEVKADVKKIEEEGANLLIGTP 59
++++PTREL+ Q+Y + F+ + + L V GGV + + IE+ GA++LI TP
Sbjct: 75 ALVLTPTRELAQQVY---KSFLRYAENTQLNLAVAYGGVSINPQISAIEK-GADILIATP 130
Query: 60 GRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTE 119
GRL D M + V D L+ +V DEADR+LDMGF+ +I+ I+SR+P R+T LFSAT E
Sbjct: 131 GRLLDHMTKGSV-DLSQLQTIVFDEADRMLDMGFKDEINRILSRVPNKRQTLLFSATFDE 189
Query: 120 AVEELSKAGLRNPVRVEV 137
+ +LSK L NPV +EV
Sbjct: 190 TIFKLSKTLLNNPVLIEV 207
>gi|431907502|gb|ELK11354.1| Putative ATP-dependent RNA helicase DDX10 [Pteropus alecto]
Length = 715
Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + + + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 145 LIISPTRELAYQTFEVLRK-VGKNHEFSAGLIIGGKDLKHEAERIN--NINILVCTPGRL 201
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL++LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 202 LQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 261
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L+NP V V ++K
Sbjct: 262 DLARLSLKNPEYVWVHEKAK 281
>gi|421496718|ref|ZP_15943932.1| ATP-dependent RNA helicase DbpA [Aeromonas media WS]
gi|407184278|gb|EKE58121.1| ATP-dependent RNA helicase DbpA [Aeromonas media WS]
Length = 459
Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 103/181 (56%), Gaps = 8/181 (4%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+ Q+ + LP+VK V L GG + GA++ +GTPGR+
Sbjct: 76 LVLCPTRELADQVAQEIRRLARALPNVKLVTLCGGTPTAPQSATLGF-GAHIAVGTPGRI 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+E+ L+ +LE LVLDEADR+LDMGF + I+ +IS P+ R+T LFSAT E +
Sbjct: 135 LKHLEQ-GTLELSSLETLVLDEADRMLDMGFGEDINRVISYAPERRQTLLFSATYPEGIA 193
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVI-WNVNQMRNHHNLLI 181
++S+ RNPV V V + H SA Q+L + P G L+ + W ++ + ++
Sbjct: 194 QMSRGVQRNPVEVSVES---LHEGSAIEQKL--YEVPAGQRLDALTWLLSHYQPGSCVVF 248
Query: 182 C 182
C
Sbjct: 249 C 249
>gi|302682610|ref|XP_003030986.1| hypothetical protein SCHCODRAFT_77182 [Schizophyllum commune H4-8]
gi|300104678|gb|EFI96083.1| hypothetical protein SCHCODRAFT_77182 [Schizophyllum commune H4-8]
Length = 775
Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 110/187 (58%), Gaps = 12/187 (6%)
Query: 2 GMIISPTRELSSQIYHVAQ---PFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGT 58
+IISPTREL+ QI+ V + PF S + L++GG +K + ++ N+L+ T
Sbjct: 127 ALIISPTRELAVQIFEVLRSIGPFHS----FSAGLVIGGKNLKDERDRLVR--MNILVAT 180
Query: 59 PGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQT 118
PGRL M++ + NL++LVLDEADR+LDMGF K +S ++ LPK R+T LFSATQT
Sbjct: 181 PGRLLQHMDQTYGFECDNLQVLVLDEADRILDMGFAKTLSALLGHLPKSRQTLLFSATQT 240
Query: 119 EAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLAS--SKTPLGLHLEVIWNVNQMRNH 176
++V +L++ L +P + + E++ H + + + L + L L+++W+ +
Sbjct: 241 DSVSDLARLSLTDPAFIATK-EAEESHTATTPKNLEQHYAICTLDQKLDLLWSFIKTHLQ 299
Query: 177 HNLLICL 183
L+ L
Sbjct: 300 SKTLVFL 306
>gi|170039659|ref|XP_001847645.1| ATP-dependent RNA helicase DBP4 [Culex quinquefasciatus]
gi|167863269|gb|EDS26652.1| ATP-dependent RNA helicase DBP4 [Culex quinquefasciatus]
Length = 735
Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 103/180 (57%), Gaps = 5/180 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI+ I D + L++GG +K + ++ + N++I TPGR
Sbjct: 140 ALIITPTRELALQIFETVAK-IGKNHDFTTGLIIGGQNLKFEKSRLHQ--LNIIICTPGR 196
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + D NL++LVLDEADR LDMGFQ ++ II LP R+T LFSATQT++V
Sbjct: 197 LLQHMDTNPLFDCTNLKVLVLDEADRCLDMGFQTAMNAIIENLPTTRQTLLFSATQTKSV 256
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNHHNLLI 181
++L++ L +PV + K + + S Q L L ++W+ + + +++
Sbjct: 257 KDLARLNLTDPVYIA--PHEKEEYTTPSRLQQNYVTVELSEKLTMLWSFLKSHSKQKIIV 314
>gi|411010953|ref|ZP_11387282.1| ATP-independent RNA helicase DbpA [Aeromonas aquariorum AAK1]
gi|423199417|ref|ZP_17186000.1| hypothetical protein HMPREF1171_04032 [Aeromonas hydrophila SSU]
gi|404628978|gb|EKB25742.1| hypothetical protein HMPREF1171_04032 [Aeromonas hydrophila SSU]
Length = 458
Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 103/181 (56%), Gaps = 8/181 (4%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+ Q+ + TLP+VK V L GG + GA++ +GTPGR+
Sbjct: 75 LVLCPTRELADQVATEIRRLARTLPNVKLVTLCGGTPTAPQSATLSF-GAHIAVGTPGRI 133
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+E+ L +L+ LVLDEADR+LDMGF + I+ +IS P+ R+T LFSAT E +
Sbjct: 134 LKHLEQ-GTLALDSLKTLVLDEADRMLDMGFGEDINRVISHAPRDRQTLLFSATYPEGIA 192
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVI-WNVNQMRNHHNLLI 181
++S+ RNPV V V + H SA Q+L + P G LE + W ++ + ++
Sbjct: 193 QMSRGVQRNPVEVSVES---LHEESAIEQKL--YEVPAGQRLEALGWLLSHYQPGSCVVF 247
Query: 182 C 182
C
Sbjct: 248 C 248
>gi|168003567|ref|XP_001754484.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694586|gb|EDQ80934.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 704
Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 107/182 (58%), Gaps = 4/182 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ + + + + LL+GG + D +K N+L+ TPGR
Sbjct: 132 AIIISPTRELAGQIFDELRK-VGKHHSISAGLLIGGRK-GVDTEKETVMNLNILVCTPGR 189
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ D L++LVLDEADR+LDMGF ++ I+ +LPK R+T LFSATQT++V
Sbjct: 190 LLQHMDETPNFDCSQLQVLVLDEADRILDMGFSGTLNAILGQLPKERQTMLFSATQTKSV 249
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNHHNLLI 181
++L++ LR+P + V AES + + + Q PL ++++W+ + +L+
Sbjct: 250 KDLARLSLRDPEFLAVHAESAA--ATPARLQQTVMIVPLDEKMDMLWSFVKTHLQTKMLV 307
Query: 182 CL 183
L
Sbjct: 308 FL 309
>gi|149237833|ref|XP_001524793.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|152112298|sp|A5E2I8.1|SPB4_LODEL RecName: Full=ATP-dependent rRNA helicase SPB4
gi|146451390|gb|EDK45646.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 637
Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 95/149 (63%), Gaps = 9/149 (6%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPD-------VKSVLLVGGV-EVKADVKKIEEEGA 52
+ ++++PTREL+ QI V + LP+ +K+ LLVG + V+ D+ +E
Sbjct: 95 LAIVMAPTRELAKQIQMVFDKVLELLPEEDSYEPRIKTQLLVGFLGNVREDLDSYQENRP 154
Query: 53 NLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGL 112
+LI TPGRL D M + ++ +LEI++LDEAD+LLDM F+ + I+ LPK RRTGL
Sbjct: 155 QILIATPGRLLDFMS-LQIVKTSSLEIVILDEADKLLDMSFETDVIKILKMLPKQRRTGL 213
Query: 113 FSATQTEAVEELSKAGLRNPVRVEVRAES 141
FSAT + A + + + G+ NPV+++V+ ++
Sbjct: 214 FSATISAAGDTIFRTGMNNPVKLQVKTKN 242
>gi|323452997|gb|EGB08870.1| hypothetical protein AURANDRAFT_26008 [Aureococcus anophagefferens]
Length = 622
Score = 108 bits (271), Expect = 7e-22, Method: Composition-based stats.
Identities = 60/136 (44%), Positives = 90/136 (66%), Gaps = 8/136 (5%)
Query: 5 ISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYD 64
+SPTREL++Q + V + + S L+VGG ++ V+ ++++ TPGRL D
Sbjct: 84 VSPTRELATQTFAVLRKLCAAKALAAS-LVVGGAAMERAVRD------DVVVATPGRLDD 136
Query: 65 IMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVEEL 124
+++R +D R + +LVLDEAD LL++GF +++ I+ LP+ RRT LFSATQT AV EL
Sbjct: 137 LLKR-GAMDGRRVAVLVLDEADTLLELGFAEELERIMRALPRQRRTALFSATQTRAVAEL 195
Query: 125 SKAGLRNPVRVEVRAE 140
++AGLRNP V VR +
Sbjct: 196 ARAGLRNPATVRVRVQ 211
>gi|336367410|gb|EGN95755.1| hypothetical protein SERLA73DRAFT_186962 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380126|gb|EGO21280.1| hypothetical protein SERLADRAFT_476265 [Serpula lacrymans var.
lacrymans S7.9]
Length = 779
Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 105/169 (62%), Gaps = 4/169 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ V + I + L++GG +K + ++ N+L+ TPGR
Sbjct: 109 ALIISPTRELAVQIFEVLRS-IGGNHSFSAGLVIGGKNLKDERDRLSR--MNILVATPGR 165
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M++ + NL++LVLDEADR+LDMGF + +S ++S LPK R+T LFSATQT++V
Sbjct: 166 LLQHMDQTFGFESDNLQVLVLDEADRILDMGFSRTLSALLSHLPKSRQTLLFSATQTDSV 225
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNV 170
++L++ L++P + V+ E+ + + S + L L+++W+
Sbjct: 226 KDLARLSLKDPASIGVQ-ETNNESATPKSLEQHYIVCELDKKLDILWSF 273
>gi|71020871|ref|XP_760666.1| hypothetical protein UM04519.1 [Ustilago maydis 521]
gi|74700620|sp|Q4P5U4.1|DBP4_USTMA RecName: Full=ATP-dependent RNA helicase DBP4
gi|46100168|gb|EAK85401.1| hypothetical protein UM04519.1 [Ustilago maydis 521]
Length = 869
Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 92/136 (67%), Gaps = 3/136 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++ISPTREL+ QI+ V + I + + L++GG +VK + ++ N+LI TPGRL
Sbjct: 134 LVISPTRELAIQIFEVLRK-IGSYHTFSAGLVIGGKDVKQEKDRLSR--INILIATPGRL 190
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M++ D N+++LVLDEADR+LDMGF + ++ I+ LP+ R+T LFSATQT+ V+
Sbjct: 191 LQHMDQTLGFDTSNVQVLVLDEADRILDMGFSRTLNAIVENLPRNRQTMLFSATQTKRVK 250
Query: 123 ELSKAGLRNPVRVEVR 138
+L++ L++P V VR
Sbjct: 251 DLARLSLQDPEYVAVR 266
>gi|195567377|ref|XP_002107237.1| GD15676 [Drosophila simulans]
gi|194204642|gb|EDX18218.1| GD15676 [Drosophila simulans]
Length = 825
Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 95/155 (61%), Gaps = 3/155 (1%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ + + D + L++GG +K + ++++ N+ I TPGR
Sbjct: 147 AIIISPTRELAYQIFETLKK-VGKHHDFSAGLIIGGKNLKFERTRMDQ--CNIXICTPGR 203
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + + +E+LVLDEADR LDMGFQK ++ II P R+T LFSATQT V
Sbjct: 204 LLQHMDENPLFNTSTMEMLVLDEADRCLDMGFQKTLNSIIENFPPARQTLLFSATQTNTV 263
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASS 156
++L++ L++PV V + +AS+++ ++
Sbjct: 264 QDLARLNLKDPVYVGYGGATPGEEPNASTKKAPNT 298
>gi|238489675|ref|XP_002376075.1| DEAD/DEAH box helicase (Sbp4), putative [Aspergillus flavus
NRRL3357]
gi|220698463|gb|EED54803.1| DEAD/DEAH box helicase (Sbp4), putative [Aspergillus flavus
NRRL3357]
Length = 583
Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 93/160 (58%), Gaps = 26/160 (16%)
Query: 10 ELSSQIYHV------------------------AQPFISTLPDVKSVLLVGGVEVKA-DV 44
EL+SQIYHV Q F S+ V LL+GG A D+
Sbjct: 43 ELASQIYHVLLSLLAFHPPSASVINPSEDDDVPRQKFPSSTLKVVPQLLLGGSTTPAEDL 102
Query: 45 KKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISR 103
K ++ NLL+ TPGRL +++ V + E+LVLDEADRLLD+GF++ + II R
Sbjct: 103 SKFLKQSPNLLVSTPGRLLELLSSPHVHCPQSSFEMLVLDEADRLLDLGFKETLQNIIRR 162
Query: 104 LPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKS 143
LPK RRTGLFSA+ +EAV+++ + GLRNPV+V V+ + S
Sbjct: 163 LPKQRRTGLFSASISEAVDQIVRVGLRNPVKVMVKVKGTS 202
>gi|336271030|ref|XP_003350274.1| hypothetical protein SMAC_01168 [Sordaria macrospora k-hell]
gi|380095671|emb|CCC07145.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 825
Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 103/171 (60%), Gaps = 13/171 (7%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ V + I + L++GG +K + +++ N+L+ TPGR
Sbjct: 134 ALIISPTRELAVQIFEVLRK-IGRNHSFSAGLVIGGKSLKEEAERLSR--MNILVCTPGR 190
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ +++ D NL+ILVLDEADR++DMGFQ+ + ++ LPK R+T LFSATQ++ V
Sbjct: 191 MLQHLDQTAGFDVDNLQILVLDEADRIMDMGFQQAVDALVEHLPKSRQTLLFSATQSKRV 250
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSK----TPLGLHLEVIW 168
+L++ L++P V V H +AS+ + + TPL L+ +W
Sbjct: 251 SDLARLSLKDPEYVSV------HEAAASATPVNLQQHYIVTPLPEKLDTLW 295
>gi|343425408|emb|CBQ68943.1| probable HCA4-can suppress the U14 snoRNA rRNA processing function
[Sporisorium reilianum SRZ2]
Length = 893
Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/137 (43%), Positives = 91/137 (66%), Gaps = 3/137 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ V + I + L++GG +VK + ++ N+L+ TPGR
Sbjct: 133 ALIISPTRELAIQIFEVLRK-IGPYHTFSAGLVIGGKDVKQEKDRLSR--MNVLVATPGR 189
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M++ D NL++LVLDEADR+LDMGF + ++ I+ LP+ R+T LFSATQT+ V
Sbjct: 190 LLQHMDQTLGFDTSNLQVLVLDEADRILDMGFSRTLNAIVENLPRDRQTMLFSATQTKRV 249
Query: 122 EELSKAGLRNPVRVEVR 138
++L++ L++P V VR
Sbjct: 250 KDLARLSLQDPEYVAVR 266
>gi|26342749|dbj|BAC35031.1| unnamed protein product [Mus musculus]
Length = 681
Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 145 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERIN--NINILVCTPGRL 201
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL++LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 202 LQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 261
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L++P V V ++K
Sbjct: 262 DLARLSLKDPEYVWVHEKAK 281
>gi|334702932|ref|ZP_08518798.1| ATP-independent RNA helicase DbpA [Aeromonas caviae Ae398]
Length = 459
Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 104/181 (57%), Gaps = 8/181 (4%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+ Q+ + TLP+VK V L GG + GA++ +GTPGR+
Sbjct: 76 LVLCPTRELADQVATEIRRLARTLPNVKLVTLCGGTPTAPQSATLGF-GAHIAVGTPGRI 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+E+ L+ +L+ LVLDEADR+LDMGF + I+ +IS P+ R+T LFSAT E +
Sbjct: 135 LKHLEQ-GTLELDDLKTLVLDEADRMLDMGFGEDINRVISHAPRDRQTLLFSATYPEGIS 193
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVI-WNVNQMRNHHNLLI 181
++S+ RNPV V V + H SA Q+L + P G L+ + W ++ + ++
Sbjct: 194 QMSRGVQRNPVEVSVES---LHEESAIEQKL--YEVPAGQRLDALTWLLSHYQPGSCVVF 248
Query: 182 C 182
C
Sbjct: 249 C 249
>gi|302899011|ref|XP_003047959.1| hypothetical protein NECHADRAFT_79984 [Nectria haematococca mpVI
77-13-4]
gi|256728891|gb|EEU42246.1| hypothetical protein NECHADRAFT_79984 [Nectria haematococca mpVI
77-13-4]
Length = 626
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 102/186 (54%), Gaps = 29/186 (15%)
Query: 2 GMIISPTRELSSQIYHV-------AQPFISTLPDVKS--------------VLLVGGVEV 40
+I+SPTREL++QI+ V + LP +K LLVGG
Sbjct: 90 AIIVSPTRELAAQIHTVLLSLLQFHEASAEVLPHLKGDEKRPATTSAAIVPQLLVGGTTT 149
Query: 41 KA-DVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQIS 98
A D+ N+LI +PGRL +++ V + E+LVLDEADRLLD+GF+ +
Sbjct: 150 TAQDLSFFLRHSPNVLISSPGRLVELLSSPHVHCPQSSFEVLVLDEADRLLDLGFKPDLQ 209
Query: 99 YIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKT 158
I+S LPK RRTGLFSA+ +EAV E+ + GLRNPV++EV+ + K + L +T
Sbjct: 210 KILSHLPKQRRTGLFSASVSEAVGEIIRVGLRNPVKIEVKVKMKDGGI------LEDRRT 263
Query: 159 PLGLHL 164
P L +
Sbjct: 264 PASLQM 269
>gi|189189818|ref|XP_001931248.1| ATP-dependent RNA helicase DBP4 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187972854|gb|EDU40353.1| ATP-dependent RNA helicase DBP4 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 766
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 102/182 (56%), Gaps = 5/182 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+SPTREL+ QI+ V + + LL+GG +K + + + + N+L+ TPGR
Sbjct: 142 ALILSPTRELAIQIFDVLRKIGRHGHMFAAGLLIGGKSLKDEREALTK--MNILVATPGR 199
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ + + +L+ILVLDEADR+LDMGFQ+ + I+ LPK R+T LFSATQ++ V
Sbjct: 200 MLQHLSQTAAFSVDDLKILVLDEADRILDMGFQRDVDAIVEYLPKERQTLLFSATQSKKV 259
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNHHNLLI 181
+L++ L+ P V V AE KS +Q PL L+ +W+ Q +L
Sbjct: 260 SDLARLSLQEPEYVSVHAEDKSATPKGLTQNYII--CPLEEKLDTLWSFIQASKKSKIL- 316
Query: 182 CL 183
C
Sbjct: 317 CF 318
>gi|328771893|gb|EGF81932.1| hypothetical protein BATDEDRAFT_19098 [Batrachochytrium
dendrobatidis JAM81]
Length = 839
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 92/136 (67%), Gaps = 3/136 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ V + + + + LL+GG ++K++ ++ N+L+ TPGR
Sbjct: 137 AVIISPTRELALQIFDVLRK-VGRYHSLSAGLLIGGKDLKSEQDRVAR--MNILVCTPGR 193
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M++ NL++LVLDEADR+LD GF+K I+ II+ LPK R+T LFSATQT++V
Sbjct: 194 LLQHMDQTPEFICDNLKLLVLDEADRILDNGFEKTINAIIANLPKSRQTLLFSATQTKSV 253
Query: 122 EELSKAGLRNPVRVEV 137
+L++ L+NP V V
Sbjct: 254 RDLARLSLQNPEYVAV 269
>gi|117617930|ref|YP_855071.1| ATP-independent RNA helicase DbpA [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117559337|gb|ABK36285.1| ATP-independent RNA helicase DbpA [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 458
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 103/181 (56%), Gaps = 8/181 (4%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+ Q+ + TLP+VK V L GG + GA++ +GTPGR+
Sbjct: 75 LVLCPTRELADQVATEIRRLARTLPNVKLVTLCGGTPTAPQSATLSF-GAHIAVGTPGRI 133
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+E+ L+ L+ LVLDEADR+LDMGF + I+ +IS P+ R+T LFSAT E +
Sbjct: 134 LKHLEQ-GTLELDGLKTLVLDEADRMLDMGFGEDINRVISHAPRDRQTLLFSATYPEGIA 192
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVI-WNVNQMRNHHNLLI 181
++S+ RNPV V V + H SA Q+L + P G L+ + W ++ + ++
Sbjct: 193 QMSRGVQRNPVEVSVES---LHEDSAIEQKL--YEVPAGQRLDALGWLLSHYQPSSCVVF 247
Query: 182 C 182
C
Sbjct: 248 C 248
>gi|302803420|ref|XP_002983463.1| hypothetical protein SELMODRAFT_730 [Selaginella moellendorffii]
gi|300148706|gb|EFJ15364.1| hypothetical protein SELMODRAFT_730 [Selaginella moellendorffii]
Length = 457
Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 100/168 (59%), Gaps = 4/168 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ + + D+ LL+GG + ++K G N+L+ TPGR
Sbjct: 76 ALIISPTRELAMQIFDELRK-VGKFHDLSGGLLIGGRK-DVSIEKQSVNGLNILVCTPGR 133
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M D L++LVLDEADR+LDMGF ++ II+++PK R+T LFSATQT +V
Sbjct: 134 LLQHMHETVNFDCSPLKLLVLDEADRILDMGFAGTLNQIIAQIPKERQTFLFSATQTRSV 193
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWN 169
++L++ L++P + V AES + + Q PL ++ +W+
Sbjct: 194 QDLARLSLQSPEYLAVHAESAV--ATPARLQQTVMVVPLDQKIDTLWS 239
>gi|308050173|ref|YP_003913739.1| DEAD/DEAH box helicase [Ferrimonas balearica DSM 9799]
gi|307632363|gb|ADN76665.1| DEAD/DEAH box helicase domain protein [Ferrimonas balearica DSM
9799]
Length = 499
Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 92/135 (68%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL++Q+ Q + LP ++SV++ GGV + ++ + GA++L+ TPGRL
Sbjct: 77 LVLTPTRELAAQVAESVQTYGQNLP-LRSVVVFGGVSINPQMQALRR-GADVLVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + + + F +LE+LVLDEADR+LDMGF + I I++ LPK R+ LFSAT + +
Sbjct: 135 LDLFSQ-NAVKFEDLELLVLDEADRMLDMGFIRDIRKILALLPKRRQNLLFSATFSGEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
EL++ L PV V+V
Sbjct: 194 ELARGLLNQPVEVDV 208
>gi|294142025|ref|YP_003558003.1| DEAD/DEAH box helicase [Shewanella violacea DSS12]
gi|293328494|dbj|BAJ03225.1| ATP-dependent RNA helicase, DEAD box family [Shewanella violacea
DSS12]
Length = 427
Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 90/135 (66%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ Q++ + + L VKS L+ GGV + A + I G ++L+ TPGRL
Sbjct: 96 LVLTPTRELALQVHGSFVKY-AKLTQVKSALVYGGVSIDAQAQ-ILAAGVDILVATPGRL 153
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D + R L+ LE LV DEADR+LDMGF+ +I I+ +LPK R+T LFSAT E++
Sbjct: 154 LDHLRRGS-LNLNQLEFLVFDEADRMLDMGFKDEIDAIVKQLPKTRQTLLFSATFDESIY 212
Query: 123 ELSKAGLRNPVRVEV 137
LS++ LR+P ++EV
Sbjct: 213 GLSQSLLRDPKQIEV 227
>gi|119191710|ref|XP_001246461.1| hypothetical protein CIMG_00232 [Coccidioides immitis RS]
gi|118575177|sp|Q1EB31.1|DBP4_COCIM RecName: Full=ATP-dependent RNA helicase DBP4
gi|392864308|gb|EAS34862.2| ATP-dependent RNA helicase DBP4 [Coccidioides immitis RS]
Length = 806
Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 107/179 (59%), Gaps = 17/179 (9%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+SPTREL+ QI+ V + I + L++GG ++ + +++ N+L+ TPGR
Sbjct: 123 ALILSPTRELAIQIFEVLRK-IGRYHTFSAGLVIGGKSLQEEQERLGR--MNILVCTPGR 179
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ M++ D ++++LVLDEADR++DMGFQ + I+ LPK R+T LFSATQT+ V
Sbjct: 180 MLQHMDQTAAFDTAHIQMLVLDEADRIMDMGFQSTVDAIVEHLPKERQTMLFSATQTKKV 239
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSK-----TPLGLHLEVIWNVNQMRN 175
+L++ LR+P + V H +ASS AS + TPL L+ +W+ +RN
Sbjct: 240 SDLARLSLRDPEYISV-------HEAASSATPASLQQHYVVTPLPEKLDTLWSF--IRN 289
>gi|27371129|gb|AAH23303.1| Ddx10 protein, partial [Mus musculus]
Length = 681
Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 145 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERIN--NINILVCTPGRL 201
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL++LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 202 LQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 261
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L++P V V ++K
Sbjct: 262 DLARLSLKDPEYVWVHEKAK 281
>gi|169768960|ref|XP_001818950.1| ATP-dependent rRNA helicase RRP3 [Aspergillus oryzae RIB40]
gi|91207780|sp|Q2UNB7.1|RRP3_ASPOR RecName: Full=ATP-dependent rRNA helicase rrp3
gi|83766808|dbj|BAE56948.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 472
Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 95/151 (62%), Gaps = 3/151 (1%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
G++++PTREL+ QI + ST+ V+S +LVGG+++ + + ++ ++++ TPG
Sbjct: 122 FGLVLAPTRELAYQISQAFEGLGSTI-SVRSTVLVGGMDMVSQSIALGKK-PHIIVATPG 179
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D +E RNL+ LV+DEADRLLDM F + I+ LP+ RRT LFSAT +
Sbjct: 180 RLLDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPILDKILKVLPRERRTYLFSATMSSK 239
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQ 151
VE L +A L+NP+RV V + SK VS Q
Sbjct: 240 VESLQRASLQNPLRVAV-SSSKFQTVSTLQQ 269
>gi|320036344|gb|EFW18283.1| ATP-dependent RNA helicase dbp4 [Coccidioides posadasii str.
Silveira]
Length = 805
Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 107/179 (59%), Gaps = 17/179 (9%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+SPTREL+ QI+ V + I + L++GG ++ + +++ N+L+ TPGR
Sbjct: 123 ALILSPTRELAIQIFEVLRK-IGRYHTFSAGLVIGGKSLQEEQERLGR--MNILVCTPGR 179
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ M++ D ++++LVLDEADR++DMGFQ + I+ LPK R+T LFSATQT+ V
Sbjct: 180 MLQHMDQTAAFDTDHIQMLVLDEADRIMDMGFQSTVDAIVEHLPKERQTMLFSATQTKKV 239
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSK-----TPLGLHLEVIWNVNQMRN 175
+L++ LR+P + V H +ASS AS + TPL L+ +W+ +RN
Sbjct: 240 SDLARLSLRDPEYISV-------HEAASSATPASLQQHYVVTPLPEKLDTLWSF--IRN 289
>gi|195399373|ref|XP_002058295.1| GJ15570 [Drosophila virilis]
gi|194150719|gb|EDW66403.1| GJ15570 [Drosophila virilis]
Length = 806
Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 88/134 (65%), Gaps = 3/134 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ + I D + L++GG +K + ++++ N+LI TPGR
Sbjct: 141 AIIISPTRELAYQIFETLKR-IGKHHDFSAGLIIGGKNLKFERTRMDQ--CNILICTPGR 197
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + + ++E+LVLDEADR LDMGFQK ++ II P R+T LFSATQT +
Sbjct: 198 LLQHMDENPLFNTTSMEMLVLDEADRCLDMGFQKTLNSIIENFPPDRQTLLFSATQTNTL 257
Query: 122 EELSKAGLRNPVRV 135
E+L++ L++PV V
Sbjct: 258 EDLARLNLKDPVYV 271
>gi|238501386|ref|XP_002381927.1| ATP-dependent RNA helicase , putative [Aspergillus flavus NRRL3357]
gi|220692164|gb|EED48511.1| ATP-dependent RNA helicase , putative [Aspergillus flavus NRRL3357]
gi|391863856|gb|EIT73155.1| ATP-dependent RNA helicase [Aspergillus oryzae 3.042]
Length = 472
Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 95/151 (62%), Gaps = 3/151 (1%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
G++++PTREL+ QI + ST+ V+S +LVGG+++ + + ++ ++++ TPG
Sbjct: 122 FGLVLAPTRELAYQISQAFEGLGSTI-SVRSTVLVGGMDMVSQSIALGKK-PHIIVATPG 179
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D +E RNL+ LV+DEADRLLDM F + I+ LP+ RRT LFSAT +
Sbjct: 180 RLLDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPILDKILKVLPRERRTYLFSATMSSK 239
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQ 151
VE L +A L+NP+RV V + SK VS Q
Sbjct: 240 VESLQRASLQNPLRVAV-SSSKFQTVSTLQQ 269
>gi|303313405|ref|XP_003066714.1| ATP-dependent RNA helicase DBP4, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240106376|gb|EER24569.1| ATP-dependent RNA helicase DBP4, putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 805
Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 107/179 (59%), Gaps = 17/179 (9%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+SPTREL+ QI+ V + I + L++GG ++ + +++ N+L+ TPGR
Sbjct: 123 ALILSPTRELAIQIFEVLRK-IGRYHTFSAGLVIGGKSLQEEQERLGR--MNILVCTPGR 179
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ M++ D ++++LVLDEADR++DMGFQ + I+ LPK R+T LFSATQT+ V
Sbjct: 180 MLQHMDQTAAFDTDHIQMLVLDEADRIMDMGFQSTVDAIVEHLPKERQTMLFSATQTKKV 239
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSK-----TPLGLHLEVIWNVNQMRN 175
+L++ LR+P + V H +ASS AS + TPL L+ +W+ +RN
Sbjct: 240 SDLARLSLRDPEYISV-------HEAASSATPASLQQHYVVTPLPEKLDTLWSF--IRN 289
>gi|334144304|ref|YP_004537460.1| DEAD/DEAH box helicase domain-containing protein
[Thioalkalimicrobium cyclicum ALM1]
gi|333965215|gb|AEG31981.1| DEAD/DEAH box helicase domain protein [Thioalkalimicrobium cyclicum
ALM1]
Length = 464
Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 99/158 (62%), Gaps = 5/158 (3%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
M++ PTREL+ Q+ + LP++K + L GG+ + A + +++ GA++++GTPGR
Sbjct: 79 AMVLCPTRELADQVAEEIRRLARRLPNIKVMTLCGGMNMGAQLSSLQQ-GAHVIVGTPGR 137
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ + + R L +L++LVLDEADR+LDMGFQ I I+ +P R+T LFSAT +
Sbjct: 138 IEEHL-RKQTLKLDDLKVLVLDEADRMLDMGFQPAIDAIMETVPSPRQTLLFSATFPSQI 196
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTP 159
E++S+ ++ P+R++V ES+ H S +Q TP
Sbjct: 197 EQISERIMQTPLRIQV--ESQHDHASI-AQHFYQVDTP 231
>gi|170086121|ref|XP_001874284.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651836|gb|EDR16076.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 517
Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 100/151 (66%), Gaps = 4/151 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+II+PTREL+ QI+ VA+ ++ ++ +GG V+A+ +++ + G NLL+ TPGRL
Sbjct: 77 IIITPTRELALQIFGVAKDLMAHHSQTFGIV-IGGTSVRAERERLIK-GVNLLVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKL-RRTGLFSATQTEAV 121
D + FRNL+ LV+DEADR+L++GF++++ IIS LPK R+T LFSATQT V
Sbjct: 135 LDHLREAKGFVFRNLKGLVIDEADRILEVGFEEEMKSIISILPKEDRQTMLFSATQTTKV 194
Query: 122 EELSKAGLR-NPVRVEVRAESKSHHVSASSQ 151
+L++ LR P+ ++V E + VS SQ
Sbjct: 195 TDLARISLRPGPIHIDVDKEEATSTVSTLSQ 225
>gi|33416833|gb|AAH55481.1| Ddx10 protein, partial [Mus musculus]
Length = 623
Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 87 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERIN--NINILVCTPGRL 143
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL++LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 144 LQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 203
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L++P V V ++K
Sbjct: 204 DLARLSLKDPEYVWVHEKAK 223
>gi|324503844|gb|ADY41663.1| ATP-dependent RNA helicase DDX10 [Ascaris suum]
Length = 826
Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 88/136 (64%), Gaps = 3/136 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++ISPTREL+ Q +HV I + + LL+GG +V+ + ++ N+++ TPGR
Sbjct: 142 ALVISPTRELAYQTFHVLNK-IGAHHNFSAALLIGGTDVEFEKNRLAT--MNIVVCTPGR 198
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ L+IL++DEADR+LD+GFQ+Q++ I+ LP R+T LFSATQT+ V
Sbjct: 199 LLQHMDENVSFSCEQLQILIIDEADRILDLGFQQQMNAIVENLPSTRQTLLFSATQTKNV 258
Query: 122 EELSKAGLRNPVRVEV 137
+L++ L++PV V V
Sbjct: 259 NDLARLALKDPVYVSV 274
>gi|397661081|ref|YP_006501781.1| putative ATP-dependent RNA helicase [Taylorella equigenitalis ATCC
35865]
gi|394349260|gb|AFN35174.1| putative ATP-dependent RNA helicase [Taylorella equigenitalis ATCC
35865]
gi|399115575|emb|CCG18378.1| probable ATP-dependent RNA helicase [Taylorella equigenitalis
14/56]
Length = 457
Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 91/141 (64%), Gaps = 2/141 (1%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G++++PT EL+ Q+ + LP++K + L GGV ++ ++ ++ GA++++GTPGR
Sbjct: 73 GLVLTPTHELADQVAQEIRKLARALPNIKVLTLCGGVALRPQIESLKH-GAHIIVGTPGR 131
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ D+++R D LD +++ VLDE DR+LDMGF I I P ++T LFSAT E +
Sbjct: 132 ILDLIQRGD-LDLSKVKVFVLDECDRMLDMGFFDDIGEISKATPLRKQTLLFSATFPEHI 190
Query: 122 EELSKAGLRNPVRVEVRAESK 142
+++S+ RNPV +E+ E K
Sbjct: 191 KKISEGFQRNPVHIELIEEEK 211
>gi|213402237|ref|XP_002171891.1| ATP-dependent rRNA helicase spb4 [Schizosaccharomyces japonicus
yFS275]
gi|211999938|gb|EEB05598.1| ATP-dependent rRNA helicase spb4 [Schizosaccharomyces japonicus
yFS275]
Length = 621
Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 104/186 (55%), Gaps = 35/186 (18%)
Query: 2 GMIISPTRELSSQIYHVAQPFI--------------------STLPDVKSVLLVGGVE-V 40
++I+PTREL++QI++V Q + + + +V +GG + V
Sbjct: 57 ALVIAPTRELATQIFNVTQELLVYQDEDEDKDGDSNSQKTKTTQKRKLTAVNYIGGKDSV 116
Query: 41 KADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYI 100
D++ ++ ++IGTPGR I E +D + + LEIL+LDEAD L+DMGFQK + I
Sbjct: 117 AQDIRLYKKTLPEIVIGTPGR---INELLDNISTKGLEILILDEADTLIDMGFQKTLQSI 173
Query: 101 ISRLPKLRRTGLFSATQTEAVEE-LSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTP 159
ISRLPK RRTGLFSAT + + L AGLRN VR+ V A QQ A +TP
Sbjct: 174 ISRLPKQRRTGLFSATMNDTISSFLRVAGLRNSVRITVNV--------AMKQQDA--RTP 223
Query: 160 LGLHLE 165
L L ++
Sbjct: 224 LSLSIQ 229
>gi|195438968|ref|XP_002067403.1| GK16405 [Drosophila willistoni]
gi|194163488|gb|EDW78389.1| GK16405 [Drosophila willistoni]
Length = 846
Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 88/134 (65%), Gaps = 3/134 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ + + D + L++GG +K + ++++ N+LI TPGR
Sbjct: 148 AIIISPTRELAYQIFETLKK-VGKHHDFSAGLIIGGKNLKFERTRMDQ--CNILICTPGR 204
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + + ++E+LVLDEADR LDMGFQK ++ II P R+T LFSATQT V
Sbjct: 205 LLQHMDENPLFNTSSMEMLVLDEADRCLDMGFQKTLNSIIENFPPDRQTLLFSATQTNTV 264
Query: 122 EELSKAGLRNPVRV 135
++L++ L++PV V
Sbjct: 265 QDLARLNLKDPVYV 278
>gi|149371676|ref|ZP_01891092.1| RNA helicase [unidentified eubacterium SCB49]
gi|149355303|gb|EDM43863.1| RNA helicase [unidentified eubacterium SCB49]
Length = 419
Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 95/142 (66%), Gaps = 3/142 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I++PTREL++QI + + S DV+S ++ GGV ++ +++ G ++L+ TPGR
Sbjct: 76 ALIVTPTRELAAQILKEIKDY-SAFTDVRSTVIFGGVNANPQIRALKQ-GTDILVATPGR 133
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D + V + + +E LVLDEADR+LDMGF + I+ I++ LP R+ LFSAT ++ +
Sbjct: 134 LLD-LHSQGVFNMKKVEFLVLDEADRMLDMGFVRDINKILAILPAKRQNLLFSATFSKEI 192
Query: 122 EELSKAGLRNPVRVEVRAESKS 143
++L+++ L NPV VE + E+ +
Sbjct: 193 KKLAQSFLTNPVLVEAQRENST 214
>gi|294932648|ref|XP_002780372.1| DEAD/DEAH box ATP-dependent RNA helicase, putative [Perkinsus
marinus ATCC 50983]
gi|239890305|gb|EER12167.1| DEAD/DEAH box ATP-dependent RNA helicase, putative [Perkinsus
marinus ATCC 50983]
Length = 566
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 93/149 (62%), Gaps = 2/149 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFI-STLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
MIISPTREL+ QI+ V + + ST +++GGV K + K+ G N+L+ TPGR
Sbjct: 146 MIISPTRELAMQIFDVCKRLVDSTKLSQTYGIVMGGVNRKNEADKLSR-GINILVATPGR 204
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D ++ + NL LV+DEADR+L +GF++ ++ I+ LPK R+T LFSATQT+ V
Sbjct: 205 LLDHLQNTRGFVYANLMSLVIDEADRILQIGFEEDMNQILKILPKKRQTSLFSATQTQKV 264
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASS 150
+L++ L+ P+ V+ + +S +S
Sbjct: 265 NDLARLSLKKPIFVQSKGADDDAAISTAS 293
>gi|294901541|ref|XP_002777405.1| ATP-dependent RNA helicase dbp7, putative [Perkinsus marinus ATCC
50983]
gi|239885036|gb|EER09221.1| ATP-dependent RNA helicase dbp7, putative [Perkinsus marinus ATCC
50983]
Length = 680
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 93/143 (65%), Gaps = 9/143 (6%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPD--VKSVLLVGGVEVKADVKKIE-EEGANL-LIG 57
+I+SPTREL++QI+ + +I P+ +K VGG ++ AD IE +G++L L+G
Sbjct: 99 AVILSPTRELATQIHDIIMQYIHANPNPQLKCYCFVGGRDIHADRAVIEGAKGSSLILVG 158
Query: 58 TPGRLYDIMERMDV---LDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFS 114
TPGR+ I+ +V L + E+LVLDEADRLL +GF+K +S I + LPK RRT LFS
Sbjct: 159 TPGRVRHILCEKEVDSPLRIKTAEVLVLDEADRLLALGFEKDMSDIFAVLPKQRRTCLFS 218
Query: 115 AT--QTEAVEELSKAGLRNPVRV 135
AT E + + KAGLRNPV V
Sbjct: 219 ATLAGAEIKQLVRKAGLRNPVHV 241
>gi|315637497|ref|ZP_07892707.1| ATP-dependent RNA helicase RhlE [Arcobacter butzleri JV22]
gi|315478215|gb|EFU68938.1| ATP-dependent RNA helicase RhlE [Arcobacter butzleri JV22]
Length = 435
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 95/146 (65%), Gaps = 4/146 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I++PTREL++Q+ + + LP KS ++ GGV + K + ++G +++I TPGR
Sbjct: 77 ALILTPTRELAAQVAQSVETYGKYLP-FKSAVIFGGVGINPQ-KALLKKGVDIIIATPGR 134
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D++ + D LD +E LVLDEADR+LDMGF I I++ LPK R+ LFSAT + +
Sbjct: 135 LLDLISQ-DSLDLSKIEFLVLDEADRMLDMGFINDIKKILAILPKQRQNLLFSATFSNEI 193
Query: 122 EELSKAGLRNPVRVEV-RAESKSHHV 146
++L+ L++PV VEV +A S S V
Sbjct: 194 KKLADGLLKSPVLVEVSKANSASFKV 219
>gi|157737720|ref|YP_001490403.1| ATP-dependent RNA helicase RhlE [Arcobacter butzleri RM4018]
gi|157699574|gb|ABV67734.1| ATP-dependent RNA helicase RhlE [Arcobacter butzleri RM4018]
Length = 435
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 95/146 (65%), Gaps = 4/146 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I++PTREL++Q+ + + LP KS ++ GGV + K + ++G +++I TPGR
Sbjct: 77 ALILTPTRELAAQVAQSVETYGKYLP-FKSAVIFGGVGINPQ-KALLKKGVDIIIATPGR 134
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D++ + D LD +E LVLDEADR+LDMGF I I++ LPK R+ LFSAT + +
Sbjct: 135 LLDLISQ-DSLDLSKIEFLVLDEADRMLDMGFINDIKKILAILPKQRQNLLFSATFSNEI 193
Query: 122 EELSKAGLRNPVRVEV-RAESKSHHV 146
++L+ L++PV VEV +A S S V
Sbjct: 194 KKLADGLLKSPVLVEVSKANSASFKV 219
>gi|24372485|ref|NP_716527.1| ATP-dependent RNA helicase DbpA [Shewanella oneidensis MR-1]
gi|24346478|gb|AAN53972.1|AE015534_11 ATP-dependent RNA helicase DbpA [Shewanella oneidensis MR-1]
Length = 458
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 96/156 (61%), Gaps = 2/156 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+ Q+ + + +VK + L GGV + + +E GA++++GTPGR+
Sbjct: 73 LVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGSLEH-GAHIIVGTPGRI 131
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++R + LD NL +LVLDEADR+L+MGFQ Q+ II + P+ R+T LFSAT E ++
Sbjct: 132 VDHLDR-NRLDLSNLNMLVLDEADRMLEMGFQPQLDAIIEQSPRERQTLLFSATFPEQIQ 190
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKT 158
++K + NPV V+ + + + QL K+
Sbjct: 191 SIAKQIMYNPVMVKAAVTHEKNTIEQHFYQLDDDKS 226
>gi|319778865|ref|YP_004129778.1| ATP-dependent RNA helicase DbpA [Taylorella equigenitalis MCE9]
gi|317108889|gb|ADU91635.1| ATP-dependent RNA helicase DbpA [Taylorella equigenitalis MCE9]
Length = 457
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 91/141 (64%), Gaps = 2/141 (1%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G++++PT EL+ Q+ + LP++K + L GGV ++ ++ ++ GA++++GTPGR
Sbjct: 73 GLVLTPTHELADQVAQEIRKLARALPNIKVLTLCGGVALRPQIESLKH-GAHIIVGTPGR 131
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ D+++R D LD +++ VLDE DR+LDMGF I I P ++T LFSAT E +
Sbjct: 132 ILDLIQRGD-LDLSKVKVFVLDECDRMLDMGFFDDIGEISKATPLRKQTLLFSATFPEHI 190
Query: 122 EELSKAGLRNPVRVEVRAESK 142
+++S+ RNPV +E+ E K
Sbjct: 191 KKISEGFQRNPVHIELIEEEK 211
>gi|88860789|ref|ZP_01135426.1| putative ATP-dependent RNA helicase DbpA [Pseudoalteromonas
tunicata D2]
gi|88817384|gb|EAR27202.1| putative ATP-dependent RNA helicase DbpA [Pseudoalteromonas
tunicata D2]
Length = 460
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 93/146 (63%), Gaps = 4/146 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+++ PTREL+ Q+ + +P+VK + L GGV + + +E GA++++GTPGR
Sbjct: 75 ALVLCPTRELADQVAQEIRKLARGIPNVKVLALCGGVPMGPQIGSLEH-GAHIIVGTPGR 133
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ D + R LD ++ LVLDEADR+LDMGF + II + P+ R+T FSAT E +
Sbjct: 134 IEDHLSRR-TLDLSHVNTLVLDEADRMLDMGFSAALDAIIDQTPRDRQTLFFSATFPEKI 192
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVS 147
++++ +R+PV+VEV ES ++V+
Sbjct: 193 QQIASRTMRDPVKVEV--ESSHNNVN 216
>gi|294886929|ref|XP_002771924.1| DEAD/DEAH box ATP-dependent RNA helicase, putative [Perkinsus
marinus ATCC 50983]
gi|239875724|gb|EER03740.1| DEAD/DEAH box ATP-dependent RNA helicase, putative [Perkinsus
marinus ATCC 50983]
Length = 582
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 93/149 (62%), Gaps = 2/149 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFI-STLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
M+ISPTREL+ QIY V + + ST +++GGV K + K+ G N+++ TPGR
Sbjct: 162 MVISPTRELAMQIYDVCKRLVDSTKLSQTYGIVMGGVNRKNEADKLSR-GINIIVATPGR 220
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D ++ + NL LV+DEADR+L +GF++ ++ I+ LPK R+T LFSATQT+ V
Sbjct: 221 LLDHLQNTRGFVYANLMSLVIDEADRILQIGFEEDMNQILKILPKKRQTSLFSATQTQKV 280
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASS 150
+L++ L+ P+ V+ + +S +S
Sbjct: 281 NDLARLSLKKPIFVQSKGADDDAAISTAS 309
>gi|336468782|gb|EGO56945.1| hypothetical protein NEUTE1DRAFT_65869 [Neurospora tetrasperma FGSC
2508]
gi|350288928|gb|EGZ70153.1| ATP-dependent rRNA helicase spb-4 [Neurospora tetrasperma FGSC
2509]
Length = 654
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 92/163 (56%), Gaps = 23/163 (14%)
Query: 2 GMIISPTRELSSQIYHVAQPFI---------------------STLPDVKSVLLVGGVEV 40
G+IISPTREL++QIY+V I +T P V LLVGG
Sbjct: 93 GIIISPTRELATQIYNVLVSLIKFHEPSAEAISHAKSDEKRPTATQPVVVPQLLVGGTTK 152
Query: 41 KA-DVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQIS 98
A D+ NLLIGTPGRL +++ V E+L++DEADRLLDMGF +++
Sbjct: 153 AAEDLGTFLRLSPNLLIGTPGRLAELLSSAYVKAPASTFEVLIMDEADRLLDMGFANELN 212
Query: 99 YIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAES 141
I+ LPK RRTGLFSA+ ++AVE L GL P ++ VR +S
Sbjct: 213 RILGYLPKQRRTGLFSASLSDAVERLITVGLLYPHKITVRVKS 255
>gi|403218173|emb|CCK72664.1| hypothetical protein KNAG_0L00410 [Kazachstania naganishii CBS
8797]
Length = 613
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 97/169 (57%), Gaps = 8/169 (4%)
Query: 3 MIISPTRELSSQIYHVAQPFI-----STLPDVKSVLLVGGVE--VKADVKKIEEEGANLL 55
+I++PTREL+ QI V Q F+ T + LLVG E ++ DV + E LL
Sbjct: 86 LILTPTRELAKQIETVVQSFLVHYTEGTQQPIGCQLLVGTNEHSIRDDVNALCENRPQLL 145
Query: 56 IGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
IGTPGR+ D+++ V ++ ++VLDEADRLLD F I I+ LPK RRTGLFSA
Sbjct: 146 IGTPGRVLDLLQSPKV-KTQSCSLVVLDEADRLLDASFVGDIEKILKVLPKQRRTGLFSA 204
Query: 116 TQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHL 164
T + A + + K GLRNPV+++V + S + S + K L L L
Sbjct: 205 TISAAGDTIFKTGLRNPVKIKVNGRAISAAPESLSINYCTVKPQLKLQL 253
>gi|348675960|gb|EGZ15778.1| hypothetical protein PHYSODRAFT_509429 [Phytophthora sojae]
Length = 749
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 103/170 (60%), Gaps = 11/170 (6%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++ISPTREL+ QI+ V + + + L++GG + + +I NLLI TPGR
Sbjct: 139 ALVISPTRELALQIFEVLRN-VGKAHAFSAGLVIGGKNFREE--QIRLIRMNLLICTPGR 195
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKL--RRTGLFSATQTE 119
L ME+ D NL++LVLDEADR+LD+GFQKQ++ I+ LP R+T LFSATQT+
Sbjct: 196 LLQHMEQTPAFDASNLQVLVLDEADRILDLGFQKQLTSILEHLPPAGERQTMLFSATQTK 255
Query: 120 AVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSK--TPLGLHLEVI 167
+V++L+ LR P V V H +A+ + L+ S TPL L+V+
Sbjct: 256 SVKDLAALSLREPEYVAVH----EHSANATPKGLSQSYVVTPLERKLDVL 301
>gi|384156092|ref|YP_005538907.1| ATP-dependent RNA helicase [Arcobacter butzleri ED-1]
gi|345469646|dbj|BAK71097.1| ATP-dependent RNA helicase [Arcobacter butzleri ED-1]
Length = 435
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 95/146 (65%), Gaps = 4/146 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I++PTREL++Q+ + + LP KS ++ GGV + K + ++G +++I TPGR
Sbjct: 77 ALILTPTRELAAQVAQSVETYGKYLP-FKSAVIFGGVGINPQ-KALLKKGVDIIIATPGR 134
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D++ + D LD +E LVLDEADR+LDMGF I I++ LPK R+ LFSAT + +
Sbjct: 135 LLDLISQ-DSLDLSKIEFLVLDEADRMLDMGFINDIKKILAILPKQRQNLLFSATFSNEI 193
Query: 122 EELSKAGLRNPVRVEV-RAESKSHHV 146
++L+ L++PV VEV +A S S V
Sbjct: 194 KKLADGLLKSPVLVEVSKANSASFKV 219
>gi|169852452|ref|XP_001832910.1| ATP-dependent RNA helicase HAS1 [Coprinopsis cinerea okayama7#130]
gi|116506045|gb|EAU88940.1| ATP-dependent RNA helicase HAS1 [Coprinopsis cinerea okayama7#130]
Length = 640
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 99/151 (65%), Gaps = 4/151 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL+ QI+ VA+ ++ V+ +GG KA+V K+ + G NLL+ TPGRL
Sbjct: 181 IILTPTRELALQIFGVAKDLMAYHSQTFGVV-IGGANPKAEVDKLSK-GVNLLVATPGRL 238
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP-KLRRTGLFSATQTEAV 121
D ++ +RNL LV+DEADR+L++GF++++ IIS LP + R++ LFSATQT V
Sbjct: 239 LDHLQNAKGFVYRNLRALVIDEADRILEIGFEEEMKRIISILPNENRQSMLFSATQTTKV 298
Query: 122 EELSKAGLR-NPVRVEVRAESKSHHVSASSQ 151
+L++ LR PV V+V E + VS SQ
Sbjct: 299 TDLARISLRPGPVHVDVDKEEATSTVSTLSQ 329
>gi|429463016|ref|YP_007184479.1| DEAD/DEAH box helicase family protein [Candidatus
Kinetoplastibacterium crithidii (ex Angomonas deanei
ATCC 30255)]
gi|451811795|ref|YP_007448250.1| ATP-dependent RNA helicase [Candidatus Kinetoplastibacterium
crithidii TCC036E]
gi|429338530|gb|AFZ82953.1| DEAD/DEAH box helicase family protein [Candidatus
Kinetoplastibacterium crithidii (ex Angomonas deanei
ATCC 30255)]
gi|451776953|gb|AGF47952.1| ATP-dependent RNA helicase [Candidatus Kinetoplastibacterium
crithidii TCC036E]
Length = 467
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 90/143 (62%), Gaps = 2/143 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ QI A + S L ++ +VGG+ KA +K + + ++L+ TPGRL
Sbjct: 76 LVLTPTRELAMQITKAASVYGSNLHWLRVATIVGGMPYKAQIKALSKR-IDILVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D M+ V D +N+ LVLDEADR+LDMGF I I++ LPK ++T LFSAT ++
Sbjct: 135 IDQMQSGRV-DLKNVHTLVLDEADRMLDMGFIDDIQTIVAELPKEKQTMLFSATIDNSIM 193
Query: 123 ELSKAGLRNPVRVEVRAESKSHH 145
L+K + NP R+ + +SH+
Sbjct: 194 NLAKQMMNNPERISLNNNKQSHN 216
>gi|440300968|gb|ELP93415.1| DEAD box ATP-dependent RNA helicase, putative [Entamoeba invadens
IP1]
Length = 525
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 92/135 (68%), Gaps = 3/135 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G++ISPTREL+ Q + +A F + ++K LL+GGVE + V + EGAN++IGT GR
Sbjct: 85 GVVISPTRELAQQTHSIALVFGNHF-NLKVKLLIGGVE-NSKVNEDLAEGANIIIGTAGR 142
Query: 62 LYDIM-ERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
+ + + + + LD++ +E+L+LDE DR+++MG + + II LPK RRTG+FSAT +
Sbjct: 143 IEETLSDNLHDLDWKTVEVLILDEGDRMMEMGLAQAMGRIIKFLPKQRRTGVFSATIPDE 202
Query: 121 VEELSKAGLRNPVRV 135
+ +L AG RNP ++
Sbjct: 203 LNKLVIAGCRNPYKI 217
>gi|67516615|ref|XP_658193.1| hypothetical protein AN0589.2 [Aspergillus nidulans FGSC A4]
gi|74627495|sp|Q5BFU1.1|DBP4_EMENI RecName: Full=ATP-dependent RNA helicase dbp4
gi|40747532|gb|EAA66688.1| hypothetical protein AN0589.2 [Aspergillus nidulans FGSC A4]
gi|259489143|tpe|CBF89171.1| TPA: ATP-dependent RNA helicase dbp4 (EC 3.6.1.-)
[Source:UniProtKB/Swiss-Prot;Acc:Q5BFU1] [Aspergillus
nidulans FGSC A4]
Length = 812
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 100/169 (59%), Gaps = 5/169 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ V + I + L++GG +K + +++ N+L+ TPGR
Sbjct: 123 ALIISPTRELAIQIFEVLRK-IGRYHTFSAGLVIGGKSLKEEQERLGR--MNILVCTPGR 179
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ +++ + NL++LVLDEADR++DMGFQK + II LP R+T LFSATQT+ V
Sbjct: 180 MLQHLDQTAFFETYNLQMLVLDEADRIMDMGFQKTVDAIIGHLPPERQTLLFSATQTKKV 239
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNV 170
+L++ L++P V V + S S Q TPL L+ +W+
Sbjct: 240 SDLARLSLQDPEYVAVHEAASSATPSKLQQHYVV--TPLPQKLDTLWSF 286
>gi|393216315|gb|EJD01805.1| DEAD-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 802
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 104/169 (61%), Gaps = 4/169 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ V + I + L++GG +K + +++ N+L+ TPGR
Sbjct: 137 ALIISPTRELAVQIFEVLRS-IGGYHTFSAGLVIGGKNLKDEKERLNR--MNILVATPGR 193
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M++ D NL++LVLDEADR+LDMGF + ++ ++ LP+ R+T LFSATQT++V
Sbjct: 194 LLQHMDQTFGFDCDNLQMLVLDEADRILDMGFSRTVNALLEHLPRSRQTLLFSATQTDSV 253
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNV 170
++L++ L++ V V V+ E SH + + L L+++W+
Sbjct: 254 KDLARLSLKDSVFVSVKEEG-SHAATPKLLEQHYVVCELDRKLDILWSF 301
>gi|51593782|gb|AAH80729.1| Ddx10 protein [Mus musculus]
Length = 744
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 80 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERIN--NINILVCTPGRL 136
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL++LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 137 LQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 196
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L++P V V ++K
Sbjct: 197 DLARLSLKDPEYVWVHEKAK 216
>gi|342183567|emb|CCC93047.1| unnamed protein product, partial [Trypanosoma congolense IL3000]
Length = 221
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 83/132 (62%), Gaps = 14/132 (10%)
Query: 1 MGMIISPTRELSSQIYHVAQPFI-----------STLPDVKSVLLVGGVEVKADVKKIEE 49
+ +I+ P+REL+ Q++ + + + S LP +GG ++ D++ +
Sbjct: 90 IAIIVLPSRELAQQVHQLTRKMLHYVSHEYQGGRSGLPKYSCQCYIGGRDIALDLEAFNK 149
Query: 50 EGANLLIGTPGRLYDIM---ERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPK 106
G N+LIGTPGRLY+++ + + +F + E+L+LDEADRLL+ GF+ ++ I+ RLPK
Sbjct: 150 NGGNILIGTPGRLYELLVSSKHSRLFNFTSFELLILDEADRLLEFGFKAKLDAILKRLPK 209
Query: 107 LRRTGLFSATQT 118
RRTGLFSATQT
Sbjct: 210 QRRTGLFSATQT 221
>gi|189491668|ref|NP_084212.2| probable ATP-dependent RNA helicase DDX10 [Mus musculus]
gi|76364168|sp|Q80Y44.2|DDX10_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX10; AltName:
Full=DEAD box protein 10
Length = 875
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 145 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERIN--NINILVCTPGRL 201
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL++LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 202 LQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 261
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L++P V V ++K
Sbjct: 262 DLARLSLKDPEYVWVHEKAK 281
>gi|121699880|ref|XP_001268205.1| DEAD box RNA helicase (Hca4), putative [Aspergillus clavatus NRRL
1]
gi|134034070|sp|A1CTZ2.1|DBP4_ASPCL RecName: Full=ATP-dependent RNA helicase dbp4
gi|119396347|gb|EAW06779.1| DEAD box RNA helicase (Hca4), putative [Aspergillus clavatus NRRL
1]
Length = 823
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 104/169 (61%), Gaps = 5/169 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+SPTREL+ QI+ V + I + L++GG ++ + +++ N+L+ TPGR
Sbjct: 124 ALILSPTRELAIQIFEVLRK-IGRYHTFSAGLVIGGKSLREEQERLGR--MNILVCTPGR 180
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ +++ + D NL++LVLDEADR+LD+GFQ+ + I+ LPK R+T LFSATQT+ V
Sbjct: 181 MLQHLDQTALFDTYNLQMLVLDEADRILDLGFQQTVDAIVGHLPKERQTLLFSATQTKKV 240
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNV 170
+L++ LR+P V V E+ S A QQ PL L+++W+
Sbjct: 241 SDLARLSLRDPEYVAVH-ETASTATPAKLQQHYVI-APLPQKLDILWSF 287
>gi|423204133|ref|ZP_17190689.1| hypothetical protein HMPREF1168_00324 [Aeromonas veronii AMC34]
gi|404628127|gb|EKB24915.1| hypothetical protein HMPREF1168_00324 [Aeromonas veronii AMC34]
Length = 459
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 102/181 (56%), Gaps = 8/181 (4%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+ Q+ + LP+VK V L GG + GA++ +GTPGR+
Sbjct: 76 LVLCPTRELADQVAQEIRRLARALPNVKLVTLCGGTPTAPQSATLSF-GAHIAVGTPGRI 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+E+ L+ L+ LVLDEADR+LDMGF + I+ +IS P+ R+T LFSAT E +
Sbjct: 135 LKHLEQ-GTLELSGLKTLVLDEADRMLDMGFGEDINRVISYAPQQRQTLLFSATYPEGIA 193
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVI-WNVNQMRNHHNLLI 181
++S+ RNPV V V + H SA Q+L + P G L+ + W ++ + ++
Sbjct: 194 QMSRGVQRNPVEVSVES---LHEGSAIEQKL--YEVPAGQRLDALTWLLSHYQPSSCVVF 248
Query: 182 C 182
C
Sbjct: 249 C 249
>gi|452125884|ref|ZP_21938467.1| ATP-dependent RNA helicase DbpA [Bordetella holmesii F627]
gi|452129247|ref|ZP_21941823.1| ATP-dependent RNA helicase DbpA [Bordetella holmesii H558]
gi|451920979|gb|EMD71124.1| ATP-dependent RNA helicase DbpA [Bordetella holmesii F627]
gi|451925117|gb|EMD75257.1| ATP-dependent RNA helicase DbpA [Bordetella holmesii H558]
Length = 462
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 88/145 (60%), Gaps = 2/145 (1%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G+++ PTREL+ Q+ + +P+VK + L GG + + + GA+L++GTPGR
Sbjct: 75 GLVVCPTRELADQVAQELRRLARLIPNVKILTLCGGAAARPQAESLAR-GAHLVVGTPGR 133
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ D + R LD L+ LVLDEADR++DMGF I I + P R+T LFSAT E +
Sbjct: 134 IQDHLAR-GSLDLSGLKTLVLDEADRMVDMGFYDDIVAIAAHCPLKRQTLLFSATYPENI 192
Query: 122 EELSKAGLRNPVRVEVRAESKSHHV 146
+LS LRNP V+V+A+ ++ +
Sbjct: 193 RKLSARFLRNPAEVKVQAQHDANRI 217
>gi|406678603|ref|ZP_11085778.1| hypothetical protein HMPREF1170_03986 [Aeromonas veronii AMC35]
gi|423201269|ref|ZP_17187849.1| hypothetical protein HMPREF1167_01432 [Aeromonas veronii AER39]
gi|404617841|gb|EKB14775.1| hypothetical protein HMPREF1167_01432 [Aeromonas veronii AER39]
gi|404621716|gb|EKB18582.1| hypothetical protein HMPREF1170_03986 [Aeromonas veronii AMC35]
Length = 459
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 102/181 (56%), Gaps = 8/181 (4%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+ Q+ + LP+VK V L GG + GA++ +GTPGR+
Sbjct: 76 LVLCPTRELADQVAQEIRRLARALPNVKLVTLCGGTPTAPQSATLSF-GAHIAVGTPGRI 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+E+ L+ L+ LVLDEADR+LDMGF + I+ +IS P+ R+T LFSAT E +
Sbjct: 135 LKHLEQ-GTLELSGLKTLVLDEADRMLDMGFGEDINRVISYAPQQRQTLLFSATYPEGIA 193
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVI-WNVNQMRNHHNLLI 181
++S+ RNPV V V + H SA Q+L + P G L+ + W ++ + ++
Sbjct: 194 QMSRGVQRNPVEVSVES---LHEGSAIEQKL--YEVPAGQRLDALTWLLSHYQPSSCVVF 248
Query: 182 C 182
C
Sbjct: 249 C 249
>gi|367000838|ref|XP_003685154.1| hypothetical protein TPHA_0D00770 [Tetrapisispora phaffii CBS 4417]
gi|357523452|emb|CCE62720.1| hypothetical protein TPHA_0D00770 [Tetrapisispora phaffii CBS 4417]
Length = 605
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 92/145 (63%), Gaps = 7/145 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPD----VKSVLLVGGVE--VKADVKKIEEEGANLL 55
+IISPTREL+ QI V + F++ P+ +KS L+VG V+ +V + + +L
Sbjct: 86 SLIISPTRELAKQIQSVIESFLTHYPEDLYPIKSQLIVGTNTNTVRDNVSEFLDNRPQIL 145
Query: 56 IGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
+GTPGR+++ ++ + ++ +++LDEADRLLD+ F K I I+ LPK RRTGLFSA
Sbjct: 146 VGTPGRIFEFLKSSGIKS-KSCSMVILDEADRLLDVSFLKDIENIMQILPKQRRTGLFSA 204
Query: 116 TQTEAVEELSKAGLRNPVRVEVRAE 140
T A + K GLRNPV+V V ++
Sbjct: 205 TINSAGSNIFKIGLRNPVKVTVNSK 229
>gi|380483223|emb|CCF40754.1| ATP-dependent rRNA helicase SPB4 [Colletotrichum higginsianum]
Length = 605
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 93/164 (56%), Gaps = 23/164 (14%)
Query: 1 MGMIISPTRELSSQIYHVAQPFI---------------------STLPDVKSVLLVGGVE 39
+I+SPTREL+ QI+ V Q + + +P + LLVGG
Sbjct: 53 FSIIVSPTRELAIQIHTVLQSLVGFHPPSAEILPCLKGDEKRPDTKVPVIVPQLLVGGTT 112
Query: 40 V-KADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQI 97
+ D+ N+L+ TPGRL +++ V + E+LVLDEADRLLDMGF++ I
Sbjct: 113 TTQQDLSFFVRHSPNVLVSTPGRLVELLASPHVRCTQSSFELLVLDEADRLLDMGFKQDI 172
Query: 98 SYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAES 141
++ LPK RRTGLFSA+ +EAV ++ GLRNPV++ VR +S
Sbjct: 173 QRVLGYLPKQRRTGLFSASVSEAVSQIITVGLRNPVKIAVRVKS 216
>gi|212526914|ref|XP_002143614.1| ATP-dependent RNA helicase , putative [Talaromyces marneffei ATCC
18224]
gi|210073012|gb|EEA27099.1| ATP-dependent RNA helicase , putative [Talaromyces marneffei ATCC
18224]
Length = 474
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 87/137 (63%), Gaps = 2/137 (1%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
G++++PTREL+ QI + ST+ V+SV+LVGG+++ I + ++++ TPG
Sbjct: 115 FGLVLAPTRELAYQISEAFEALGSTI-SVRSVVLVGGMDMVPQAIAIGKR-PHIIVATPG 172
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D +E R+L+ LV+DEADRLLDM F I I+ LP+ RRT LFSAT +
Sbjct: 173 RLLDHLENTKGFSLRSLKYLVMDEADRLLDMDFGPIIDKILKVLPRERRTFLFSATMSSK 232
Query: 121 VEELSKAGLRNPVRVEV 137
VE L +A L NP+RV V
Sbjct: 233 VESLQRASLSNPLRVSV 249
>gi|261193373|ref|XP_002623092.1| ATP-dependent RNA helicase DBP4 [Ajellomyces dermatitidis SLH14081]
gi|239588697|gb|EEQ71340.1| ATP-dependent RNA helicase DBP4 [Ajellomyces dermatitidis SLH14081]
Length = 810
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 103/171 (60%), Gaps = 9/171 (5%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+++SPTREL+ QI+ V + I + L++GG ++ + +++ N+L+ TPGR
Sbjct: 124 ALVLSPTRELAIQIFEVLRK-IGRHHTFSAGLVIGGKSLQEEQERLGR--MNILVCTPGR 180
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ M++ D ++++LVLDEADR++DMGFQ + II LPK R+T LFSATQT+ V
Sbjct: 181 MLQHMDQTAAFDTNHIQLLVLDEADRIMDMGFQSTVDAIIDHLPKERQTMLFSATQTKKV 240
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSK--TPLGLHLEVIWNV 170
+L++ LRNP + V + SA+ +L + TPL L+ +W+
Sbjct: 241 SDLARLSLRNPEYISVHETA----ASATPAKLQQNYIVTPLPEKLDTLWSF 287
>gi|239613981|gb|EEQ90968.1| ATP-dependent RNA helicase DBP4 [Ajellomyces dermatitidis ER-3]
gi|327353332|gb|EGE82189.1| ATP-dependent RNA helicase DBP4 [Ajellomyces dermatitidis ATCC
18188]
Length = 810
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 103/171 (60%), Gaps = 9/171 (5%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+++SPTREL+ QI+ V + I + L++GG ++ + +++ N+L+ TPGR
Sbjct: 124 ALVLSPTRELAIQIFEVLRK-IGRHHTFSAGLVIGGKSLQEEQERLGR--MNILVCTPGR 180
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ M++ D ++++LVLDEADR++DMGFQ + II LPK R+T LFSATQT+ V
Sbjct: 181 MLQHMDQTAAFDTNHIQLLVLDEADRIMDMGFQSTVDAIIDHLPKERQTMLFSATQTKKV 240
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSK--TPLGLHLEVIWNV 170
+L++ LRNP + V + SA+ +L + TPL L+ +W+
Sbjct: 241 SDLARLSLRNPEYISVHETA----ASATPAKLQQNYIVTPLPEKLDTLWSF 287
>gi|198429557|ref|XP_002122407.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 18
isoform 2 [Ciona intestinalis]
Length = 575
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 95/153 (62%), Gaps = 3/153 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++ISPTREL+ QIY V Q + L++GG ++ KK+ G N+++ TPGRL
Sbjct: 166 IVISPTRELAMQIYGVLQDLLKHHCQTYG-LIMGGSNRSSEAKKLGN-GINIIVATPGRL 223
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++ FRNL+ L++DEADR+L++GF++++ I+ LPK R+T LFSATQT+ +E
Sbjct: 224 LDHLQNTQEFMFRNLQCLIIDEADRILEVGFEEEMKQIVRLLPKRRQTMLFSATQTKKIE 283
Query: 123 ELSKAGLRN-PVRVEVRAESKSHHVSASSQQLA 154
+L++ L+ P+ V V +S V Q A
Sbjct: 284 DLARVSLKKMPLYVGVDDSEQSATVDGLEQGYA 316
>gi|160358733|sp|A6R918.2|SPB4_AJECN RecName: Full=ATP-dependent rRNA helicase SPB4
Length = 676
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 95/171 (55%), Gaps = 32/171 (18%)
Query: 2 GMIISPTRELSSQIYHVAQPFI-------------------------------STLPDVK 30
++ISPTREL++QIY+V + STL V
Sbjct: 97 AILISPTRELATQIYNVLLSLLAFHGPSAARLQRTENNSGEVDESNPASSYPPSTLKIVP 156
Query: 31 SVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLL 89
+LL G D+ ++ N+L+ TPGRL +++ + E+LVLDEADRLL
Sbjct: 157 QLLLGGTTTPTQDLSAFLKQSPNVLVSTPGRLLELLSSPHAHCSQSSFEVLVLDEADRLL 216
Query: 90 DMGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAE 140
D+GF++ + I+ RLPK RRTGLFSA+ +EAV+++ + GLRNPV++ V+ +
Sbjct: 217 DLGFKEDLQKILQRLPKQRRTGLFSASVSEAVDQIIRVGLRNPVKIAVKVK 267
>gi|29351650|gb|AAH49261.1| Ddx10 protein, partial [Mus musculus]
Length = 891
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 161 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERIN--NINILVCTPGRL 217
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL++LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 218 LQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 277
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L++P V V ++K
Sbjct: 278 DLARLSLKDPEYVWVHEKAK 297
>gi|254487619|ref|ZP_05100824.1| ATP-dependent RNA helicase RhlE [Roseobacter sp. GAI101]
gi|214044488|gb|EEB85126.1| ATP-dependent RNA helicase RhlE [Roseobacter sp. GAI101]
Length = 437
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 92/142 (64%), Gaps = 3/142 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G++++PTREL++QI + F +K++++VGG + +K++E G +LL+ TPGR
Sbjct: 78 GLVLAPTRELANQIMENLKGFCEGT-QLKAMMVVGGQSINPQIKRLER-GVDLLVATPGR 135
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D+M+R VL LVLDEAD++LDMGF + I S LPK R+T LFSAT + +
Sbjct: 136 LLDLMDRRAVL-LHKTTFLVLDEADQMLDMGFIHDLRKIASVLPKERQTMLFSATMPKLM 194
Query: 122 EELSKAGLRNPVRVEVRAESKS 143
E++ + L +P+R+EV K+
Sbjct: 195 NEIANSYLNSPIRIEVSPPGKA 216
>gi|330828193|ref|YP_004391145.1| ATP-dependent RNA helicase DbpA [Aeromonas veronii B565]
gi|423211117|ref|ZP_17197670.1| hypothetical protein HMPREF1169_03188 [Aeromonas veronii AER397]
gi|328803329|gb|AEB48528.1| ATP-dependent RNA helicase DbpA [Aeromonas veronii B565]
gi|404614119|gb|EKB11123.1| hypothetical protein HMPREF1169_03188 [Aeromonas veronii AER397]
Length = 459
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 102/181 (56%), Gaps = 8/181 (4%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+ Q+ + LP+VK V L GG + GA++ +GTPGR+
Sbjct: 76 LVLCPTRELADQVAQEIRRLARALPNVKLVTLCGGTPTAPQSATLSF-GAHIAVGTPGRI 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+E+ L+ L+ LVLDEADR+LDMGF + I+ +IS P+ R+T LFSAT E +
Sbjct: 135 LKHLEQ-GTLELSGLKTLVLDEADRMLDMGFGEDINRVISYAPERRQTLLFSATYPEGIA 193
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVI-WNVNQMRNHHNLLI 181
++S+ RNPV V V + H SA Q+L + P G L+ + W ++ + ++
Sbjct: 194 QMSRGVQRNPVEVSVES---LHEGSAIEQKL--YEVPAGQRLDALTWLLSHYQPSSCVVF 248
Query: 182 C 182
C
Sbjct: 249 C 249
>gi|85082015|ref|XP_956827.1| hypothetical protein NCU03380 [Neurospora crassa OR74A]
gi|74654397|sp|Q873H9.1|SPB4_NEUCR RecName: Full=ATP-dependent rRNA helicase spb-4
gi|28881156|emb|CAD70326.1| related to RNA helicase SPB4 [Neurospora crassa]
gi|28917906|gb|EAA27591.1| hypothetical protein NCU03380 [Neurospora crassa OR74A]
Length = 654
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 92/163 (56%), Gaps = 23/163 (14%)
Query: 2 GMIISPTRELSSQIYHVAQPFI---------------------STLPDVKSVLLVGGVEV 40
G+IISPTREL++QIY+V + +T P V LLVGG
Sbjct: 93 GIIISPTRELATQIYNVLVSLVKFHEPSAEAISHAKSDEKRPTATQPVVVPQLLVGGTTK 152
Query: 41 KA-DVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQIS 98
A D+ NLLIGTPGRL +++ V E+L++DEADRLLDMGF +++
Sbjct: 153 AAEDLGTFLRLSPNLLIGTPGRLAELLSSAYVKAPASTFEVLIMDEADRLLDMGFANELN 212
Query: 99 YIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAES 141
I+ LPK RRTGLFSA+ ++AVE L GL P ++ VR +S
Sbjct: 213 RILGYLPKQRRTGLFSASLSDAVERLITVGLLYPHKITVRVKS 255
>gi|336471197|gb|EGO59358.1| hypothetical protein NEUTE1DRAFT_79371 [Neurospora tetrasperma FGSC
2508]
gi|350292283|gb|EGZ73478.1| ATP-dependent RNA helicase dbp-4 [Neurospora tetrasperma FGSC 2509]
Length = 823
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 103/172 (59%), Gaps = 13/172 (7%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ V + I + L++GG +K + +++ N+L+ TPGR
Sbjct: 132 ALIISPTRELAVQIFEVLRK-IGRNHSFSAGLVIGGKSLKEEAERLGR--MNILVCTPGR 188
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ +++ D NL++LVLDEADR++DMGFQ+ + ++ LPK R+T LFSATQ++ V
Sbjct: 189 MLQHLDQTAGFDVDNLQMLVLDEADRIMDMGFQQAVDALVEHLPKSRQTLLFSATQSKRV 248
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSK----TPLGLHLEVIWN 169
+L++ L++P V V H +AS+ + + TPL L+ +W
Sbjct: 249 SDLARLSLKDPEYVSV------HEAAASATPVGLQQHYIVTPLPEKLDTLWG 294
>gi|85085468|ref|XP_957516.1| hypothetical protein NCU04439 [Neurospora crassa OR74A]
gi|74696212|sp|Q7RZ35.1|DBP4_NEUCR RecName: Full=ATP-dependent RNA helicase dbp-4
gi|28918608|gb|EAA28280.1| hypothetical protein NCU04439 [Neurospora crassa OR74A]
gi|40882181|emb|CAF06007.1| probable putative RNA helicase HCA4 [Neurospora crassa]
Length = 823
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 103/172 (59%), Gaps = 13/172 (7%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ V + I + L++GG +K + +++ N+L+ TPGR
Sbjct: 132 ALIISPTRELAVQIFEVLRK-IGRNHSFSAGLVIGGKSLKEEAERLGR--MNILVCTPGR 188
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ +++ D NL++LVLDEADR++DMGFQ+ + ++ LPK R+T LFSATQ++ V
Sbjct: 189 MLQHLDQTAGFDVDNLQMLVLDEADRIMDMGFQQAVDALVEHLPKSRQTLLFSATQSKRV 248
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSK----TPLGLHLEVIWN 169
+L++ L++P V V H +AS+ + + TPL L+ +W
Sbjct: 249 SDLARLSLKDPEYVSV------HEAAASATPVGLQQHYIVTPLPEKLDTLWG 294
>gi|359797638|ref|ZP_09300221.1| ATP-dependent RNA helicase DbpA [Achromobacter arsenitoxydans SY8]
gi|359364441|gb|EHK66155.1| ATP-dependent RNA helicase DbpA [Achromobacter arsenitoxydans SY8]
Length = 462
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 85/145 (58%), Gaps = 2/145 (1%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G+++ PTREL+ Q+ + +P+VK + L GG + + + G +L++GTPGR
Sbjct: 75 GLVVCPTRELADQVAQELRRLARLIPNVKILTLCGGAAARPQAESLAR-GTHLVVGTPGR 133
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ D +ER LD L LVLDEADR++DMGF I I S P R+T LFSAT + +
Sbjct: 134 IQDHLERGS-LDLSGLNTLVLDEADRMVDMGFYDDIVAIASHCPTKRQTLLFSATYPDNI 192
Query: 122 EELSKAGLRNPVRVEVRAESKSHHV 146
+LS LRNP V+V A+ + +
Sbjct: 193 RKLSARFLRNPAEVKVEAQHDASRI 217
>gi|302784512|ref|XP_002974028.1| hypothetical protein SELMODRAFT_874 [Selaginella moellendorffii]
gi|300158360|gb|EFJ24983.1| hypothetical protein SELMODRAFT_874 [Selaginella moellendorffii]
Length = 457
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 101/170 (59%), Gaps = 8/170 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADV--KKIEEEGANLLIGTP 59
+IISPTREL+ QI+ + + D+ LL+GG + DV +K G N+L+ TP
Sbjct: 76 ALIISPTRELAMQIFDELRK-VGKFHDLSGGLLIGG---RKDVSTEKQSVNGLNILVCTP 131
Query: 60 GRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTE 119
GRL M D L++LVLDEADR+LDMGF ++ II+++PK R+T LFSATQT
Sbjct: 132 GRLLQHMHETVNFDCSPLKLLVLDEADRILDMGFAGTLNQIIAQIPKERQTFLFSATQTR 191
Query: 120 AVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWN 169
+V++L++ L++P + V AES + + Q PL ++ +W+
Sbjct: 192 SVQDLARLSLQSPEYLAVHAESAV--ATPARLQQTVMVVPLDQKIDTLWS 239
>gi|46122619|ref|XP_385863.1| hypothetical protein FG05687.1 [Gibberella zeae PH-1]
gi|91206546|sp|Q4IAS1.1|DBP4_GIBZE RecName: Full=ATP-dependent RNA helicase DBP4
Length = 793
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 103/170 (60%), Gaps = 9/170 (5%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL++QI+ V + + T + L++GG +K + ++++ N+L+ TPGR
Sbjct: 126 ALIISPTRELAAQIFEVLRK-VGTKHSFSAGLVIGGKSLKEEAERLDR--MNILVCTPGR 182
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ ++ D NL+ILVLDEADR++DMGFQ + +I LP+ R+T +FSATQ++ V
Sbjct: 183 MLQHFDQTAGFDANNLQILVLDEADRIMDMGFQSAVDALIEHLPRERQTLMFSATQSKKV 242
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSK--TPLGLHLEVIWN 169
+L++ L++P V V + VSA+ L TPL L+ ++
Sbjct: 243 SDLARLSLKDPEYVSVHEAA----VSATPTNLQQHYIVTPLTEKLDTLYG 288
>gi|157818683|ref|NP_001100290.1| probable ATP-dependent RNA helicase DDX10 [Rattus norvegicus]
gi|149041670|gb|EDL95511.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 (predicted) [Rattus
norvegicus]
Length = 874
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 145 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERIN--NINILVCTPGRL 201
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL++LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 202 LQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 261
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L++P V V ++K
Sbjct: 262 DLARLSLKDPEYVWVHEKAK 281
>gi|367033377|ref|XP_003665971.1| hypothetical protein MYCTH_2310255 [Myceliophthora thermophila ATCC
42464]
gi|347013243|gb|AEO60726.1| hypothetical protein MYCTH_2310255 [Myceliophthora thermophila ATCC
42464]
Length = 830
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 101/167 (60%), Gaps = 5/167 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ QI+ V + I + L++GG +K + +++ N+L+ TPGR+
Sbjct: 128 LIISPTRELAIQIFEVLRK-IGRNHYFSAGLVIGGKSLKEEAERLGR--MNILVCTPGRM 184
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+++ D NL+ILVLDEADR++DMGFQ + ++ LPK R+T LFSATQ++ V
Sbjct: 185 LQHLDQTANFDVNNLQILVLDEADRIMDMGFQSAVDALVEHLPKTRQTLLFSATQSKRVS 244
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWN 169
+L++ L++P V A + + ++ Q + TPL L+ +W
Sbjct: 245 DLARLSLKDPEYVS--AHEAAPTATPTTLQQSYVVTPLAEKLDTLWG 289
>gi|307178385|gb|EFN67130.1| Probable ATP-dependent RNA helicase DDX47 [Camponotus floridanus]
Length = 435
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 97/143 (67%), Gaps = 2/143 (1%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+I++PTREL+ QI + S++ VK ++VGG+++ A +E++ +++I TPG
Sbjct: 72 FALILTPTRELAFQISEQFEALGSSI-GVKCAVIVGGMDMHAQGLLLEKK-PHIIIATPG 129
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D +E + R ++ L++DEADR+L+M F+ +++ I+ +P+ RRT LFSAT T+
Sbjct: 130 RLVDHLENTKGFNLRQIKFLIMDEADRILNMDFEVEVNKILRVMPRERRTLLFSATMTKK 189
Query: 121 VEELSKAGLRNPVRVEVRAESKS 143
V++L +A LRNPV+VEV + ++
Sbjct: 190 VQKLQRASLRNPVKVEVSTKYQT 212
>gi|198429555|ref|XP_002122319.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 18
isoform 1 [Ciona intestinalis]
Length = 627
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 95/153 (62%), Gaps = 3/153 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++ISPTREL+ QIY V Q + L++GG ++ KK+ G N+++ TPGRL
Sbjct: 218 IVISPTRELAMQIYGVLQDLLKHHCQTYG-LIMGGSNRSSEAKKLGN-GINIIVATPGRL 275
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++ FRNL+ L++DEADR+L++GF++++ I+ LPK R+T LFSATQT+ +E
Sbjct: 276 LDHLQNTQEFMFRNLQCLIIDEADRILEVGFEEEMKQIVRLLPKRRQTMLFSATQTKKIE 335
Query: 123 ELSKAGLRN-PVRVEVRAESKSHHVSASSQQLA 154
+L++ L+ P+ V V +S V Q A
Sbjct: 336 DLARVSLKKMPLYVGVDDSEQSATVDGLEQGYA 368
>gi|15240418|ref|NP_200302.1| DEAD-box ATP-dependent RNA helicase 32 [Arabidopsis thaliana]
gi|75333773|sp|Q9FFT9.1|RH32_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 32
gi|9758271|dbj|BAB08770.1| RNA helicase-like protein [Arabidopsis thaliana]
gi|332009172|gb|AED96555.1| DEAD-box ATP-dependent RNA helicase 32 [Arabidopsis thaliana]
Length = 739
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 108/183 (59%), Gaps = 8/183 (4%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL++Q + V + + LL+GG E DV+K N+L+ PGRL
Sbjct: 147 IIISPTRELAAQTFGVLNK-VGKFHKFSAGLLIGGRE-GVDVEKERVHEMNILVCAPGRL 204
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ + L+IL+LDEADR+LD F+ Q+ IIS+LPK R+T LFSATQT+ V+
Sbjct: 205 LQHMDETPNFECPQLQILILDEADRVLDSAFKGQLDPIISQLPKHRQTLLFSATQTKKVK 264
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSK--TPLGLHLEVIWNVNQMRNHHNLL 180
+L++ LR+P + V AE+ V+A+ L + P+ L+++W+ + + +L
Sbjct: 265 DLARLSLRDPEYISVHAEA----VTATPTSLMQTVMIVPVEKKLDMLWSFIKTHLNSRIL 320
Query: 181 ICL 183
+ L
Sbjct: 321 VFL 323
>gi|115704798|ref|XP_780056.2| PREDICTED: probable ATP-dependent RNA helicase DDX10-like
[Strongylocentrotus purpuratus]
Length = 867
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 95/155 (61%), Gaps = 7/155 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++ISPTREL+ Q + V + D + L++GG ++K ++++I + N+++ TPGR
Sbjct: 137 ALVISPTRELAYQTFEVLCK-VGANHDFSAGLIIGGKDLKTEMERIPK--TNVVVCTPGR 193
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + NL+ILVLDEADR+LD+GFQ+ I I+ LP R+T LFSATQT++V
Sbjct: 194 LLQHMDETACFESLNLKILVLDEADRILDLGFQRTIDAILDHLPAERQTLLFSATQTKSV 253
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASS 156
+L++ L P V V HH ++ QL S
Sbjct: 254 RDLARLSLLEPKYVAVH----EHHTHSTPVQLEQS 284
>gi|374851722|dbj|BAL54673.1| ATP-dependent RNA helicase RhlE [uncultured candidate division OP1
bacterium]
gi|374855485|dbj|BAL58341.1| ATP-dependent RNA helicase RhlE [uncultured candidate division OP1
bacterium]
Length = 391
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 104/181 (57%), Gaps = 6/181 (3%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++QI + + LP ++ L GGV + + ++ G ++++ TPGRL
Sbjct: 60 LILTPTRELAAQIETNVRDYARFLPQLRCAALYGGVAMGPQISELRR-GVDIIVATPGRL 118
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D + R LD +++I VLDEADR+LDMGF I YIIS LPK R++ LFSAT +E
Sbjct: 119 IDHVRRR-TLDLCHIKIFVLDEADRMLDMGFMPDIKYIISLLPKARQSLLFSATMPPEIE 177
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNHHNLLIC 182
++ L NPV V V ++ V SQ L P L ++ + ++ H ++LI
Sbjct: 178 SFARRILTNPVIVSV--GPRATPVEGVSQFL--YPVPKHLKFALLKRLLEITPHTSVLIF 233
Query: 183 L 183
+
Sbjct: 234 M 234
>gi|340503971|gb|EGR30468.1| hypothetical protein IMG5_131190 [Ichthyophthirius multifiliis]
Length = 436
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 82/125 (65%), Gaps = 4/125 (3%)
Query: 2 GMIISPTRELSSQIYHVAQPF---ISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGT 58
G+I++PTREL+ QI+ + Q I +P L +GG + DV+ +E+ G N+LI +
Sbjct: 85 GLIMAPTRELAIQIHEICQKLLDKIQNVPKYSLQLCIGGHNTQIDVQNLEKTGCNILIAS 144
Query: 59 PGRLYDIME-RMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQ 117
PG+L +++ + L +NLEIL++DEADRL+D + + I +I+ LPK RRTGLFSAT
Sbjct: 145 PGKLKELINLNCEFLIIKNLEILIMDEADRLMDNDYYEDIQFILQNLPKQRRTGLFSATL 204
Query: 118 TEAVE 122
E+ +
Sbjct: 205 RESAD 209
>gi|225560223|gb|EEH08505.1| ATP-dependent rRNA helicase SPB4 [Ajellomyces capsulatus G186AR]
Length = 638
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 95/171 (55%), Gaps = 32/171 (18%)
Query: 2 GMIISPTRELSSQIYHVAQPFI-------------------------------STLPDVK 30
++ISPTREL++QIY+V + STL V
Sbjct: 59 AILISPTRELATQIYNVLLSLLAFHGPSAARLQRTENNSGEGDESNPASSYPPSTLKIVP 118
Query: 31 SVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLL 89
+LL G D+ ++ N+L+ TPGRL +++ + E+LVLDEADRLL
Sbjct: 119 QLLLGGTTTPTQDLSTFLKQSPNVLVSTPGRLLELLSSPHAHCSQSSFEVLVLDEADRLL 178
Query: 90 DMGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAE 140
D+GF++ + I+ RLPK RRTGLFSA+ +EAV+++ + GLRNPV++ V+ +
Sbjct: 179 DLGFKEDLQKILQRLPKQRRTGLFSASVSEAVDQIIRVGLRNPVKIAVKVK 229
>gi|254491400|ref|ZP_05104579.1| DbpA RNA binding domain family [Methylophaga thiooxidans DMS010]
gi|224462878|gb|EEF79148.1| DbpA RNA binding domain family [Methylophaga thiooxydans DMS010]
Length = 460
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 86/138 (62%), Gaps = 2/138 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+ Q+ + +P++K V+L GG + + +E GA++++GTPGR+
Sbjct: 76 LVLCPTRELAEQVGKEIRKLARFMPNIKLVMLCGGKPIGPQIGSLEH-GAHIVVGTPGRV 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D + R + L L LVLDEADR+LDMGF + II + PK R+T LFSAT + ++
Sbjct: 135 QDHL-RKNTLKLDGLTTLVLDEADRMLDMGFADAMQAIIGQTPKNRQTLLFSATYPDTIQ 193
Query: 123 ELSKAGLRNPVRVEVRAE 140
+S+ RNPV V V AE
Sbjct: 194 HMSRQIQRNPVTVTVEAE 211
>gi|167526114|ref|XP_001747391.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774226|gb|EDQ87858.1| predicted protein [Monosiga brevicollis MX1]
Length = 504
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 105/182 (57%), Gaps = 5/182 (2%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
++++PTREL+ QI S + +KS +LVGG+++ + ++ ++LI TPG
Sbjct: 153 FALVLAPTRELAFQIRQTFNALGSPI-GLKSAVLVGGIDMTTQAIALAKK-PHVLIATPG 210
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D +E + L L++DEADR+L+M ++K++ I++ +P+ RRT LFSAT T
Sbjct: 211 RLVDHLENTKGFHLKALRYLIMDEADRMLNMDYEKELDKILAVIPRERRTFLFSATMTSK 270
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNHHNLL 180
V +L +A LR+PV+VEV ++ K+ K +I+ +NQ+R + ++
Sbjct: 271 VGKLQRASLRDPVKVEVNSKYKTVDTLIQRYMFVPQKFK---DCYLIYLMNQLRGNSFII 327
Query: 181 IC 182
C
Sbjct: 328 FC 329
>gi|384172779|ref|YP_005554156.1| ATP-dependent RNA helicase [Arcobacter sp. L]
gi|345472389|dbj|BAK73839.1| ATP-dependent RNA helicase [Arcobacter sp. L]
Length = 448
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 96/146 (65%), Gaps = 4/146 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I++PTREL++Q+ + + LP KS ++ GGV + K + ++G +++I TPGR
Sbjct: 76 ALILTPTRELAAQVAQSVETYGKYLP-FKSAVIFGGVGINPQ-KALLKKGVDIIIATPGR 133
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D++ + D L+ +E L+LDEADR+LDMGF I I++ LPK R+ LFSAT + +
Sbjct: 134 LLDLISQ-DSLNLSKIEFLILDEADRMLDMGFINDIKKILAILPKQRQNLLFSATFSTEI 192
Query: 122 EELSKAGLRNPVRVEV-RAESKSHHV 146
++L+ L++P+ +EV +A S SH V
Sbjct: 193 KKLADGLLKSPILIEVAKANSTSHKV 218
>gi|117921821|ref|YP_871013.1| ATP-dependent RNA helicase DbpA [Shewanella sp. ANA-3]
gi|117614153|gb|ABK49607.1| DEAD/DEAH box helicase domain protein [Shewanella sp. ANA-3]
Length = 479
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+ Q+ + + +VK + L GGV + + +E GA++++GTPGR+
Sbjct: 94 LVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGSLEH-GAHIIVGTPGRI 152
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D +ER + LD NL +LVLDEADR+L+MGFQ Q+ II + P+ R+T LFSAT E ++
Sbjct: 153 VDHLER-NRLDLSNLNMLVLDEADRMLEMGFQPQLDAIIEQSPRERQTLLFSATFPEQIQ 211
Query: 123 ELSKAGLRNPVRVEV 137
++K + +PV V+V
Sbjct: 212 SIAKQIMYDPVMVKV 226
>gi|114048765|ref|YP_739315.1| ATP-dependent RNA helicase DbpA [Shewanella sp. MR-7]
gi|113890207|gb|ABI44258.1| DEAD/DEAH box helicase domain protein [Shewanella sp. MR-7]
Length = 479
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+ Q+ + + +VK + L GGV + + +E GA++++GTPGR+
Sbjct: 94 LVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGSLEH-GAHIIVGTPGRI 152
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D +ER + LD NL +LVLDEADR+L+MGFQ Q+ II + P+ R+T LFSAT E ++
Sbjct: 153 VDHLER-NRLDLSNLNMLVLDEADRMLEMGFQPQLDAIIEQSPRERQTLLFSATFPEQIQ 211
Query: 123 ELSKAGLRNPVRVEV 137
++K + +PV V+V
Sbjct: 212 SIAKQIMYDPVMVKV 226
>gi|428167084|gb|EKX36049.1| hypothetical protein GUITHDRAFT_165849 [Guillardia theta CCMP2712]
Length = 312
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 96/152 (63%), Gaps = 4/152 (2%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
++ISPTREL+SQI Q + +K+V ++GG++ ++ + + ++++GTPG
Sbjct: 83 FAVVISPTRELASQIEEHFQALGKGI-GLKTVSVIGGIDEVTQMRMLAKT-PHVIVGTPG 140
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL +++ M RN++ LVLDEADRLL F+KQ+ I+ LP+ R+T LFSAT T
Sbjct: 141 RLLYMLQNMKGFSLRNIKYLVLDEADRLLHEDFEKQLDQILEVLPRERQTFLFSATMTSK 200
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQ 152
V++L +A LR+P++VEV SK V QQ
Sbjct: 201 VQKLQRASLRDPIKVEV--ASKYSTVDTLKQQ 230
>gi|408394462|gb|EKJ73670.1| hypothetical protein FPSE_06288 [Fusarium pseudograminearum CS3096]
Length = 791
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 102/170 (60%), Gaps = 9/170 (5%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL++QI+ V + + T + L++GG +K + +++ N+L+ TPGR
Sbjct: 126 ALIISPTRELAAQIFEVLKK-VGTKHSFSAGLVIGGKSLKEEADRLDR--MNILVCTPGR 182
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ ++ D NL+ILVLDEADR++DMGFQ + +I LP+ R+T +FSATQ++ V
Sbjct: 183 MLQHFDQTAGFDANNLQILVLDEADRIMDMGFQSAVDALIEHLPRERQTLMFSATQSKKV 242
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSK--TPLGLHLEVIWN 169
+L++ L++P V V + VSA+ L TPL L+ ++
Sbjct: 243 SDLARLSLKDPEYVSVHEAA----VSATPTNLQQHYIVTPLTEKLDTLYG 288
>gi|302423502|ref|XP_003009581.1| ATP-dependent RNA helicase dbp-4 [Verticillium albo-atrum VaMs.102]
gi|261352727|gb|EEY15155.1| ATP-dependent RNA helicase dbp-4 [Verticillium albo-atrum VaMs.102]
Length = 702
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 55/140 (39%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL++QI+ V + I + L++GG +K + +++ + N+L+ TPGR
Sbjct: 124 ALIISPTRELAAQIFEVLRK-IGRYHAFSAGLVIGGKSLKEEAERLAK--MNILVCTPGR 180
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ +++ D NL++LVLDEADR++DMGFQ+ + ++ LP R+T LFSATQ++ +
Sbjct: 181 MLQHLDQTAGFDVDNLQMLVLDEADRIMDMGFQQAVDALVEHLPATRQTLLFSATQSKKI 240
Query: 122 EELSKAGLRNPVRVEVRAES 141
+L++ LR+P V V E+
Sbjct: 241 SDLARLSLRDPAYVAVHEEA 260
>gi|259418826|ref|ZP_05742743.1| putative ATP-dependent RNA helicase RhlE [Silicibacter sp.
TrichCH4B]
gi|259345048|gb|EEW56902.1| putative ATP-dependent RNA helicase RhlE [Silicibacter sp.
TrichCH4B]
Length = 442
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 92/141 (65%), Gaps = 3/141 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G+I++PTREL++QI + P +K+ L+VGGV + + ++ G ++L+ TPGR
Sbjct: 78 GLILAPTRELANQIAETLRGLTEGSP-LKTGLVVGGVSINPQINRLSR-GTDILVATPGR 135
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L DI++R LD + + LVLDEAD++LD+GF + I + LP+ R+T LFSAT + +
Sbjct: 136 LLDILDR-KALDLGSCDFLVLDEADQMLDLGFIHALRKIAALLPEKRQTMLFSATMPKQM 194
Query: 122 EELSKAGLRNPVRVEVRAESK 142
E++ A L++PVR+EV K
Sbjct: 195 NEIANAYLKSPVRIEVTPPGK 215
>gi|171690172|ref|XP_001910011.1| hypothetical protein [Podospora anserina S mat+]
gi|170945034|emb|CAP71145.1| unnamed protein product [Podospora anserina S mat+]
Length = 694
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 100/185 (54%), Gaps = 27/185 (14%)
Query: 2 GMIISPTRELSSQIYHVA--------------------QPFISTLPDVKSVLLVGGVEVK 41
G+II+PTREL+ QIY+V + I++ P V LLVGG
Sbjct: 107 GIIIAPTRELAQQIYNVCVSLIKFHPQSAEQLQHDRDEKRTITSEPVVYPQLLVGGTTKA 166
Query: 42 A-DVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISY 99
A D+ NLLIGTPGRL +++ V E+LV+DEADRLLD+GF ++++
Sbjct: 167 AEDLSAFLRLSPNLLIGTPGRLAELLASPYVKAPASTFEVLVMDEADRLLDLGFSQELNR 226
Query: 100 IISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTP 159
I+ LPK RRTGLFSA+ ++AVE L GL P R+ VR + ++ KTP
Sbjct: 227 ILGYLPKQRRTGLFSASLSDAVERLVTVGLLYPHRITVRVRNLR-----DGGEIQERKTP 281
Query: 160 LGLHL 164
+ L +
Sbjct: 282 MSLQM 286
>gi|389634695|ref|XP_003715000.1| ATP-dependent RNA helicase DBP4 [Magnaporthe oryzae 70-15]
gi|152013483|sp|A4RGU2.1|DBP4_MAGO7 RecName: Full=ATP-dependent RNA helicase DBP4
gi|351647333|gb|EHA55193.1| ATP-dependent RNA helicase DBP4 [Magnaporthe oryzae 70-15]
gi|440470545|gb|ELQ39612.1| ATP-dependent RNA helicase DBP4 [Magnaporthe oryzae Y34]
gi|440477824|gb|ELQ58804.1| ATP-dependent RNA helicase DBP4 [Magnaporthe oryzae P131]
Length = 798
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 102/168 (60%), Gaps = 5/168 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+++SPTREL+ Q + V + I + L++GG V+ + + + N+LIGTPGR
Sbjct: 124 ALVLSPTRELAVQTFQVLRK-IGRHHLFSAGLVIGGKSVREEAEALSR--MNILIGTPGR 180
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ +++ D NL++LVLDEADR++D+GFQ+ + ++ LP R+T LFSATQ++ V
Sbjct: 181 ILQHLDQTHGFDVDNLQLLVLDEADRIMDLGFQRDVDALVQHLPTTRQTLLFSATQSKKV 240
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWN 169
+L++ L++P V V AE+ + + S+ Q TPL L+ +W
Sbjct: 241 SDLARLSLKDPEYVSVHAEATT--ATPSTLQQHYIVTPLPEKLDTLWG 286
>gi|113969089|ref|YP_732882.1| ATP-dependent RNA helicase DbpA [Shewanella sp. MR-4]
gi|113883773|gb|ABI37825.1| DEAD/DEAH box helicase domain protein [Shewanella sp. MR-4]
Length = 458
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+ Q+ + + +VK + L GGV + + +E GA++++GTPGR+
Sbjct: 73 LVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGSLEH-GAHIIVGTPGRI 131
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D +ER + LD NL +LVLDEADR+L+MGFQ Q+ II + P+ R+T LFSAT E ++
Sbjct: 132 VDHLER-NRLDLSNLNMLVLDEADRMLEMGFQPQLDAIIEQSPRERQTLLFSATFPEQIQ 190
Query: 123 ELSKAGLRNPVRVEV 137
++K + +PV V+V
Sbjct: 191 SIAKQIMYDPVMVKV 205
>gi|154276718|ref|XP_001539204.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150414277|gb|EDN09642.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 638
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 95/171 (55%), Gaps = 32/171 (18%)
Query: 2 GMIISPTRELSSQIYHVAQPFI-------------------------------STLPDVK 30
++ISPTREL++QIY+V + STL V
Sbjct: 59 AILISPTRELATQIYNVLLSLLAFHGPSAARLQRTENNSGEVDESNPASSYPPSTLKIVP 118
Query: 31 SVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLL 89
+LL G D+ ++ N+L+ TPGRL +++ + E+LVLDEADRLL
Sbjct: 119 QLLLGGTTTPTQDLSAFLKQSPNVLVSTPGRLLELLSSPHAHCSQSSFEVLVLDEADRLL 178
Query: 90 DMGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAE 140
D+GF++ + I+ RLPK RRTGLFSA+ +EAV+++ + GLRNPV++ V+ +
Sbjct: 179 DLGFKEDLQKILQRLPKQRRTGLFSASVSEAVDQIIRVGLRNPVKIAVKVK 229
>gi|354481236|ref|XP_003502808.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 [Cricetulus
griseus]
gi|344243626|gb|EGV99729.1| putative ATP-dependent RNA helicase DDX10 [Cricetulus griseus]
Length = 877
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 145 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERIN--NINILVCTPGRL 201
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL++LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 202 LQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 261
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L++P + V ++K
Sbjct: 262 DLARLSLKDPEYIWVHEKAK 281
>gi|254577701|ref|XP_002494837.1| ZYRO0A10802p [Zygosaccharomyces rouxii]
gi|238937726|emb|CAR25904.1| ZYRO0A10802p [Zygosaccharomyces rouxii]
Length = 771
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 90/130 (69%), Gaps = 3/130 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QIY V I T + L++GG +VK + ++I + N+LIGTPGR
Sbjct: 114 ALIISPTRELAMQIYEVLIK-IGTHCSFSAGLVIGGKDVKFEAERISK--INILIGTPGR 170
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L +++ L+ NL++LVLDEADR LDMGF+K + I+S LP +R+T LFSATQ++++
Sbjct: 171 LLQHLDQSVGLNIDNLQMLVLDEADRCLDMGFKKTLDAIVSNLPPIRQTLLFSATQSQSL 230
Query: 122 EELSKAGLRN 131
+L++ L +
Sbjct: 231 NDLARLSLTD 240
>gi|380492419|emb|CCF34618.1| ATP-dependent rRNA helicase RRP3 [Colletotrichum higginsianum]
Length = 481
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 92/139 (66%), Gaps = 6/139 (4%)
Query: 1 MGMIISPTRELSSQIYHVAQPF--ISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGT 58
G++++PTREL++QI Q F + +L +++ ++VGG+++ A + ++ +++I T
Sbjct: 122 FGLVLAPTRELAAQI---GQQFEALGSLISLRTAVIVGGLDMVAQAIALGKK-PHVIIAT 177
Query: 59 PGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQT 118
PGRL D +E+ R+L+ LV+DEADRLLDM F I I+ +P+ RRT LFSAT +
Sbjct: 178 PGRLVDHLEKTKGFSLRSLKYLVMDEADRLLDMDFGPSIDKILKFVPRERRTFLFSATMS 237
Query: 119 EAVEELSKAGLRNPVRVEV 137
+E L +A LR+PVRV +
Sbjct: 238 SKIESLQRASLRDPVRVSI 256
>gi|240278976|gb|EER42482.1| ATP-dependent rRNA helicase SPB4 [Ajellomyces capsulatus H143]
Length = 655
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 95/171 (55%), Gaps = 32/171 (18%)
Query: 2 GMIISPTRELSSQIYHVAQPFI-------------------------------STLPDVK 30
++ISPTREL++QIY+V + STL V
Sbjct: 97 AILISPTRELATQIYNVLLSLLAFHGPSAARLQLTENNSGEGDEPNPASSYPPSTLKIVP 156
Query: 31 SVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLL 89
+LL G D+ ++ N+L+ TPGRL +++ + E+LVLDEADRLL
Sbjct: 157 QLLLGGTTTPTQDLSTFLKQSPNVLVSTPGRLLELLSSPHAHCSQSSFEVLVLDEADRLL 216
Query: 90 DMGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAE 140
D+GF++ + I+ RLPK RRTGLFSA+ +EAV+++ + GLRNP+++ V+ +
Sbjct: 217 DLGFKEDLQKILQRLPKQRRTGLFSASVSEAVDQIIRVGLRNPIKIAVKVK 267
>gi|341038958|gb|EGS23950.1| hypothetical protein CTHT_0006600 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 679
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 104/190 (54%), Gaps = 30/190 (15%)
Query: 2 GMIISPTRELSSQIYHVAQPFI---------------------STLPDVKSVLLVGG-VE 39
+IISPTREL+SQIY+V I +T P + LLVGG V+
Sbjct: 91 AIIISPTRELASQIYNVLVSLIKFHPESSELLQYAKSDEKRPATTKPVIVPQLLVGGTVK 150
Query: 40 VKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQIS 98
D+ NLL+GTPGRL +++ V + E+LV+DEADRLLD+GF +++
Sbjct: 151 AAEDLSIFLRLSPNLLVGTPGRLAELLSSPYVKTPASSFEVLVMDEADRLLDLGFSPELT 210
Query: 99 YIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAES-KSHHVSASSQQLASSK 157
I+ LPK RRTGLFSA+ ++AVE L G+ P ++ VR +S K+ V + K
Sbjct: 211 RILGYLPKQRRTGLFSASLSDAVERLITVGMLYPHKITVRVKSLKTGGV------IEERK 264
Query: 158 TPLGLHLEVI 167
TP+ L + I
Sbjct: 265 TPMSLQMSYI 274
>gi|269987038|gb|EEZ93313.1| DEAD/DEAH box helicase domain protein [Candidatus Parvarchaeum
acidiphilum ARMAN-4]
Length = 435
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 88/138 (63%), Gaps = 3/138 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
MII+PTREL+ Q+ V + I +K+V + GG + +++I GAN++IGTPGR
Sbjct: 70 AMIITPTRELALQVTEVVRE-IGRHMQLKAVTIYGGASINYQIREIRN-GANIIIGTPGR 127
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D+M+R + L+ ++ LVLDE D +LDMGF I YI+S+LPK R+T FSAT E +
Sbjct: 128 LIDLMKRRE-LNTDSIRFLVLDEVDIMLDMGFIDDIKYILSKLPKKRQTMFFSATIPEEI 186
Query: 122 EELSKAGLRNPVRVEVRA 139
+ ++ NP+ V + A
Sbjct: 187 KHITLNYTNNPINVNIDA 204
>gi|91794376|ref|YP_564027.1| DEAD/DEAH box helicase-like protein [Shewanella denitrificans
OS217]
gi|91716378|gb|ABE56304.1| DEAD/DEAH box helicase-like protein [Shewanella denitrificans
OS217]
Length = 496
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 90/135 (66%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL++Q+ + + LP +KS ++ GGV + + +++ G ++L+ TPGRL
Sbjct: 77 LVLTPTRELAAQVADSVETYGHNLP-LKSAVVFGGVSIVPQIAALKQ-GVDILVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + L F LEILVLDEADR+LDMGF + I +++ LPK R+ +FSAT ++ +
Sbjct: 135 LDLCNQR-ALSFSTLEILVLDEADRMLDMGFIRDIRKVLAMLPKQRQNLMFSATFSDDIR 193
Query: 123 ELSKAGLRNPVRVEV 137
EL+K + NPV + V
Sbjct: 194 ELAKGLVNNPVEISV 208
>gi|346318712|gb|EGX88314.1| ATP-dependent rRNA helicase RRP3 [Cordyceps militaris CM01]
Length = 480
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 96/153 (62%), Gaps = 7/153 (4%)
Query: 1 MGMIISPTRELSSQIYHVAQPF--ISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGT 58
G++++PTREL++QI Q F + L ++ ++VGG+++ + ++ ++++ T
Sbjct: 128 FGLVLAPTRELAAQI---GQTFEALGALISLRCAVIVGGLDMVPQAVALGKK-PHVIVAT 183
Query: 59 PGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQT 118
PGRL D +E+ R L+ LVLDEADRLLDM F + I ++ +P+ RRT LFSAT +
Sbjct: 184 PGRLVDHLEKTKGFSLRTLKYLVLDEADRLLDMDFGESIEKLLKFIPRERRTYLFSATMS 243
Query: 119 EAVEELSKAGLRNPVRVEVRAESKSHHVSASSQ 151
+VE L +A LR+PVRV V A SK VS Q
Sbjct: 244 SSVESLQRASLRDPVRVSVSA-SKYQTVSTLKQ 275
>gi|345570677|gb|EGX53498.1| hypothetical protein AOL_s00006g364 [Arthrobotrys oligospora ATCC
24927]
Length = 795
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 103/169 (60%), Gaps = 5/169 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ V + I + L++GG ++ + +++ N+L+ TPGR
Sbjct: 124 ALIISPTRELAIQIFEVLRK-IGQRHSFSAGLVIGGKNLQDERERLGR--MNILVCTPGR 180
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ +E+ LD NL+ILVLDEADR+LDMGF+ I I+ +PK R+T LFSATQT+ V
Sbjct: 181 MKQHLEQNPDLDTYNLQILVLDEADRILDMGFKDSIDAIVQGIPKSRQTLLFSATQTKNV 240
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNV 170
+L++ L++P V V E+ S QQ TPL L+++W+
Sbjct: 241 NDLARLSLKDPEYVAVH-EAASAATPGKLQQHYIV-TPLPEKLDILWSF 287
>gi|328773869|gb|EGF83906.1| hypothetical protein BATDEDRAFT_15345 [Batrachochytrium
dendrobatidis JAM81]
Length = 460
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 91/136 (66%), Gaps = 3/136 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ QI+ VA+ +L+ GG KA+ +K+ + G NL++ TPGRL
Sbjct: 54 LIISPTRELALQIFGVAKELFEHHSQTFGILM-GGANRKAEAEKLGK-GVNLIVATPGRL 111
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++ F+NL++L++DEADR+L++GF++++ II LP R+T LFSATQT VE
Sbjct: 112 LDHLQNTKSFIFKNLKMLIIDEADRILEVGFEEEMHKIIGLLPTERQTMLFSATQTTKVE 171
Query: 123 ELSKAGLRN-PVRVEV 137
+L++ L+ P+ + V
Sbjct: 172 DLARVSLKKAPLYINV 187
>gi|99080768|ref|YP_612922.1| DEAD/DEAH box helicase [Ruegeria sp. TM1040]
gi|99037048|gb|ABF63660.1| DEAD/DEAH box helicase-like protein [Ruegeria sp. TM1040]
Length = 445
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 93/141 (65%), Gaps = 3/141 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G+I++PTREL++QI + P +K+ L+VGGV + + ++ + G ++L+ TPGR
Sbjct: 78 GLILAPTRELANQIAETLRGLTEGSP-LKTGLVVGGVSINPQIHRLSK-GTDILVATPGR 135
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L DI++R LD + + LVLDEAD++LD+GF + I + LP+ R+T LFSAT + +
Sbjct: 136 LLDILDR-KALDLGSCDFLVLDEADQMLDLGFIHALRKIAALLPEERQTMLFSATMPKQM 194
Query: 122 EELSKAGLRNPVRVEVRAESK 142
E++ A L++PVR+EV K
Sbjct: 195 NEIANAYLKSPVRIEVTPPGK 215
>gi|193683600|ref|XP_001951837.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Acyrthosiphon pisum]
Length = 450
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 96/143 (67%), Gaps = 2/143 (1%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+I++PTREL+ QI + S++ VK ++VGG+++ A + ++ +++I TPG
Sbjct: 89 FALILTPTRELAFQISEQIEALGSSI-GVKCAVIVGGMDMMAQSLMLAKK-PHIIIATPG 146
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D +E RNL++LV+DEADR+L+M F++++ I+ +P+ RRT LFSAT T+
Sbjct: 147 RLVDHLENTKGFSLRNLKVLVMDEADRILNMDFEEEVDKILKVIPRERRTFLFSATMTKK 206
Query: 121 VEELSKAGLRNPVRVEVRAESKS 143
V++L +A L +PVRVEV + ++
Sbjct: 207 VQKLHRASLVDPVRVEVSTKFQT 229
>gi|242782113|ref|XP_002479938.1| ATP-dependent RNA helicase , putative [Talaromyces stipitatus ATCC
10500]
gi|218720085|gb|EED19504.1| ATP-dependent RNA helicase , putative [Talaromyces stipitatus ATCC
10500]
Length = 478
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 87/137 (63%), Gaps = 2/137 (1%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
G++++PTREL+ QI + ST+ V+SV+LVGG+++ I + ++++ TPG
Sbjct: 122 FGLVLAPTRELAYQISEAFEALGSTI-SVRSVVLVGGMDMVPQAIAIGKR-PHIIVATPG 179
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D +E R+L+ LV+DEADRLLDM F I I+ LP+ RRT LFSAT +
Sbjct: 180 RLLDHLENTKGFSLRSLKYLVMDEADRLLDMDFGPIIDKILKVLPRERRTFLFSATMSSK 239
Query: 121 VEELSKAGLRNPVRVEV 137
VE L +A L NP+RV V
Sbjct: 240 VEGLQRASLSNPLRVSV 256
>gi|195048518|ref|XP_001992542.1| GH24149 [Drosophila grimshawi]
gi|193893383|gb|EDV92249.1| GH24149 [Drosophila grimshawi]
Length = 798
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 86/134 (64%), Gaps = 3/134 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ + + D + L++GG +K + ++++ N+LI TPGR
Sbjct: 138 AIIISPTRELAYQIFETLKK-VGKHHDFSAGLIIGGKNLKFERTRMDQ--CNILICTPGR 194
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + + +E+LVLDEADR LDMGFQK ++ II P R+T LFSATQT +
Sbjct: 195 LLQHMDENPLFNTSTMEMLVLDEADRCLDMGFQKTLNAIIENFPPDRQTLLFSATQTNTL 254
Query: 122 EELSKAGLRNPVRV 135
E+L++ L+ PV V
Sbjct: 255 EDLARLNLQQPVYV 268
>gi|448122884|ref|XP_004204553.1| Piso0_000404 [Millerozyma farinosa CBS 7064]
gi|448125154|ref|XP_004205111.1| Piso0_000404 [Millerozyma farinosa CBS 7064]
gi|358249744|emb|CCE72810.1| Piso0_000404 [Millerozyma farinosa CBS 7064]
gi|358350092|emb|CCE73371.1| Piso0_000404 [Millerozyma farinosa CBS 7064]
Length = 777
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 101/170 (59%), Gaps = 4/170 (2%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+ +I+SPTRELS QI+ V I + L+ GG +VK + ++I N+L+GTPG
Sbjct: 135 VALIVSPTRELSIQIFEVLTS-IGKYNSFSAGLVTGGKDVKFEKERISR--MNILVGTPG 191
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL L+ NL++LVLDEADR LDMGF+KQ+ II LP R+T L+SAT +++
Sbjct: 192 RLSQHFNESVGLETSNLKVLVLDEADRCLDMGFKKQVDNIIGHLPPTRQTLLYSATFSQS 251
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNV 170
V +L++ L +P+++ V ++ S Q + PL L+++W+
Sbjct: 252 VRDLARLSLADPMKIGVSSDDIISETPESLDQYYAI-IPLHEKLDMLWSF 300
>gi|224825377|ref|ZP_03698482.1| DEAD/DEAH box helicase domain protein [Pseudogulbenkiania
ferrooxidans 2002]
gi|224602298|gb|EEG08476.1| DEAD/DEAH box helicase domain protein [Pseudogulbenkiania
ferrooxidans 2002]
Length = 460
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 92/144 (63%), Gaps = 2/144 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+ Q+ + ++ ++K V L GG + + +E GA++++GTPGRL
Sbjct: 76 LVLCPTRELADQVAKEIRRLARSVDNIKVVTLCGGTPMGPQIGSLEH-GAHVVVGTPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+D + R + LD +E LVLDEADR++DMGF ++I I++ P+ R+T LFSAT + +
Sbjct: 135 HDHLSR-NTLDLSTVETLVLDEADRMVDMGFYEEIVGIVAACPRKRQTLLFSATYPDTIR 193
Query: 123 ELSKAGLRNPVRVEVRAESKSHHV 146
+ S L+NPV V+V + + H+
Sbjct: 194 KQSARFLKNPVEVKVESLHDAGHI 217
>gi|217972086|ref|YP_002356837.1| DEAD/DEAH box helicase [Shewanella baltica OS223]
gi|217497221|gb|ACK45414.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS223]
Length = 515
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 89/135 (65%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL++Q+ + + LP ++S ++ GGV + + K+ G ++L+ TPGRL
Sbjct: 77 LVLTPTRELAAQVAESVETYGKNLP-LRSAVIFGGVPINPQIAKLRH-GVDVLVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + V F LEILVLDEADR+LDMGF + I I++ LPK R+ +FSAT ++ +
Sbjct: 135 MDLYNQKAV-KFSQLEILVLDEADRMLDMGFIRDIRKILAILPKQRQNLMFSATFSDEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
EL+K + NPV + V
Sbjct: 194 ELAKGLVNNPVEISV 208
>gi|347539605|ref|YP_004847030.1| ATP-dependent RNA helicase DbpA [Pseudogulbenkiania sp. NH8B]
gi|345642783|dbj|BAK76616.1| ATP-dependent RNA helicase DbpA [Pseudogulbenkiania sp. NH8B]
Length = 460
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 92/144 (63%), Gaps = 2/144 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+ Q+ + ++ ++K V L GG + + +E GA++++GTPGRL
Sbjct: 76 LVLCPTRELADQVAKEIRRLARSVDNIKVVTLCGGTPMGPQIGSLEH-GAHVVVGTPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+D + R + LD +E LVLDEADR++DMGF ++I I++ P+ R+T LFSAT + +
Sbjct: 135 HDHLSR-NTLDLSTVETLVLDEADRMVDMGFYEEIVGIVAACPRKRQTLLFSATYPDTIR 193
Query: 123 ELSKAGLRNPVRVEVRAESKSHHV 146
+ S L+NPV V+V + + H+
Sbjct: 194 KQSARFLKNPVEVKVESLHDAGHI 217
>gi|386342411|ref|YP_006038777.1| DEAD/DEAH box helicase [Shewanella baltica OS117]
gi|334864812|gb|AEH15283.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS117]
Length = 515
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 89/135 (65%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL++Q+ + + LP ++S ++ GGV + + K+ G ++L+ TPGRL
Sbjct: 77 LVLTPTRELAAQVAESVETYGKNLP-LRSAVIFGGVPINPQIAKLRH-GVDVLVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + V F LEILVLDEADR+LDMGF + I I++ LPK R+ +FSAT ++ +
Sbjct: 135 MDLYNQKAV-KFSQLEILVLDEADRMLDMGFIRDIRKILAILPKQRQNLMFSATFSDEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
EL+K + NPV + V
Sbjct: 194 ELAKGLVNNPVEISV 208
>gi|373950799|ref|ZP_09610760.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS183]
gi|386323368|ref|YP_006019485.1| DEAD/DEAH box helicase [Shewanella baltica BA175]
gi|333817513|gb|AEG10179.1| DEAD/DEAH box helicase domain protein [Shewanella baltica BA175]
gi|373887399|gb|EHQ16291.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS183]
Length = 515
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 89/135 (65%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL++Q+ + + LP ++S ++ GGV + + K+ G ++L+ TPGRL
Sbjct: 77 LVLTPTRELAAQVAESVETYGKNLP-LRSAVIFGGVPINPQIAKLRH-GVDVLVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + V F LEILVLDEADR+LDMGF + I I++ LPK R+ +FSAT ++ +
Sbjct: 135 MDLYNQKAV-KFSQLEILVLDEADRMLDMGFIRDIRKILAILPKQRQNLMFSATFSDEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
EL+K + NPV + V
Sbjct: 194 ELAKGLVNNPVEISV 208
>gi|168021219|ref|XP_001763139.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685622|gb|EDQ72016.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 494
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 89/136 (65%), Gaps = 3/136 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ QIY VA+ + +++ GG + + +K+ + G N L+ TPGRL
Sbjct: 80 IIISPTRELAMQIYGVARDILKYHKQTHGIVM-GGANRRTEAEKLAK-GVNFLVATPGRL 137
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++ F+NL+ LV+DEADR+L++GF++++ II LPK R+T LFSATQT VE
Sbjct: 138 LDHLQNTKGFIFKNLKCLVIDEADRILEIGFEEEMKQIIKLLPKERQTVLFSATQTTKVE 197
Query: 123 ELSKAGLRN-PVRVEV 137
+L++ + P+ + V
Sbjct: 198 DLARVSFKKAPLYIGV 213
>gi|126739425|ref|ZP_01755118.1| DEAD/DEAH box helicase-like protein [Roseobacter sp. SK209-2-6]
gi|126719525|gb|EBA16234.1| DEAD/DEAH box helicase-like protein [Roseobacter sp. SK209-2-6]
Length = 468
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 91/141 (64%), Gaps = 3/141 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G++++PTREL++QI + P +K L+VGGV + + +I G ++L+ TPGR
Sbjct: 103 GLVLAPTRELANQIAETLKALTEGTP-MKVGLVVGGVSINPQISRIAR-GTDILVATPGR 160
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L DI++R D LD + + LVLDEAD++LD+GF + I + LP+ R+T LFSAT + +
Sbjct: 161 LLDILDR-DALDLGSCDFLVLDEADQMLDLGFIHALRKISALLPEERQTMLFSATMPKQM 219
Query: 122 EELSKAGLRNPVRVEVRAESK 142
E++ + L+ PVR+EV K
Sbjct: 220 NEIANSYLKRPVRIEVTPPGK 240
>gi|445496859|ref|ZP_21463714.1| ATP-dependent RNA helicase rhlE [Janthinobacterium sp. HH01]
gi|444786854|gb|ELX08402.1| ATP-dependent RNA helicase rhlE [Janthinobacterium sp. HH01]
Length = 509
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 96/141 (68%), Gaps = 3/141 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+ Q+Y + + LP +KS + GGV ++ + K+ + G ++L+ TPGRL
Sbjct: 77 LVLVPTRELAEQVYESFRSYGGNLP-LKSAVAYGGVPIEPQITKLRK-GLDVLVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D++++ + F L+ LVLDEADR+LD+GF++ + +++ LPK R+T LFSAT ++ +
Sbjct: 135 IDLLDQ-GAISFAMLQTLVLDEADRMLDLGFERDLDILLAALPKQRQTLLFSATFSDEIR 193
Query: 123 ELSKAGLRNPVRVEVRAESKS 143
+L+ LR+PV ++V A + +
Sbjct: 194 KLAGGMLRDPVSIQVSASNTA 214
>gi|392590331|gb|EIW79660.1| DEAD-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 825
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 106/167 (63%), Gaps = 4/167 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ QI+ V + I + L++GG +K + +++ N+L+ TPGRL
Sbjct: 130 LIISPTRELAVQIFDVLRS-IGGYHGFSAGLVIGGKNLKDERERLSR--MNILVATPGRL 186
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M++ + NL++LVLDEADR+LDMGF + +S ++S LPK R+T LFSATQT++V
Sbjct: 187 LQHMDQTFGFESDNLQMLVLDEADRILDMGFARTLSALLSHLPKSRQTLLFSATQTQSVA 246
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWN 169
+L++ L +P+ + V + S + +S Q S PL L+V+W+
Sbjct: 247 QLARLSLNDPIPIGVGDVTSSSTMPSSLSQHFSI-VPLDRKLDVLWS 292
>gi|330947845|ref|XP_003306982.1| hypothetical protein PTT_20301 [Pyrenophora teres f. teres 0-1]
gi|311315216|gb|EFQ84920.1| hypothetical protein PTT_20301 [Pyrenophora teres f. teres 0-1]
Length = 808
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 102/182 (56%), Gaps = 5/182 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+SPTREL+ QI+ V + + LL+GG +K + + + + N+L+ TPGR
Sbjct: 125 ALILSPTRELAIQIFDVLRKIGRHGHMFAAGLLIGGKSLKDEREALTK--MNILVATPGR 182
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ + + +L+ILVLDEADR+LDMGFQ+ + I+ LPK R+T LFSATQ++ V
Sbjct: 183 MLQHLSQTAAFSVDDLKILVLDEADRILDMGFQRDVDAIVEYLPKERQTLLFSATQSKKV 242
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNHHNLLI 181
+L++ L++P V V AE KS +Q P L+ +W+ Q +L
Sbjct: 243 SDLARLSLQDPEYVSVHAEDKSATPKGLTQNYII--CPQEEKLDTLWSFIQASKKSKIL- 299
Query: 182 CL 183
C
Sbjct: 300 CF 301
>gi|378707268|ref|YP_005272162.1| DEAD/DEAH box helicase [Shewanella baltica OS678]
gi|418024343|ref|ZP_12663326.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS625]
gi|315266257|gb|ADT93110.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS678]
gi|353536303|gb|EHC05862.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS625]
Length = 514
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 89/135 (65%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL++Q+ + + LP ++S ++ GGV + + K+ G ++L+ TPGRL
Sbjct: 77 LVLTPTRELAAQVAESVETYGKNLP-LRSAVIFGGVPINPQIAKLRH-GVDVLVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + V F LEILVLDEADR+LDMGF + I I++ LPK R+ +FSAT ++ +
Sbjct: 135 MDLYNQKAV-KFSQLEILVLDEADRMLDMGFIRDIRKILAILPKQRQNLMFSATFSDEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
EL+K + NPV + V
Sbjct: 194 ELAKGLVNNPVEISV 208
>gi|126175663|ref|YP_001051812.1| DEAD/DEAH box helicase [Shewanella baltica OS155]
gi|125998868|gb|ABN62943.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS155]
Length = 526
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 89/135 (65%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL++Q+ + + LP ++S ++ GGV + + K+ G ++L+ TPGRL
Sbjct: 88 LVLTPTRELAAQVAESVETYGKNLP-LRSAVIFGGVPINPQIAKLRH-GVDVLVATPGRL 145
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + V F LEILVLDEADR+LDMGF + I I++ LPK R+ +FSAT ++ +
Sbjct: 146 MDLYNQKAV-KFSQLEILVLDEADRMLDMGFIRDIRKILAILPKQRQNLMFSATFSDEIR 204
Query: 123 ELSKAGLRNPVRVEV 137
EL+K + NPV + V
Sbjct: 205 ELAKGLVNNPVEISV 219
>gi|332208126|ref|XP_003253149.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 isoform 1
[Nomascus leucogenys]
Length = 872
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 145 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERIN--NINILVCTPGRL 201
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ +L++LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 202 LQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 261
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L+NP V V ++K
Sbjct: 262 DLARLSLKNPEYVWVHEKAK 281
>gi|326318919|ref|YP_004236591.1| DEAD/DEAH box helicase domain-containing protein [Acidovorax avenae
subsp. avenae ATCC 19860]
gi|323375755|gb|ADX48024.1| DEAD/DEAH box helicase domain protein [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 478
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 87/138 (63%), Gaps = 2/138 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+ Q+ + ++K V L GGV ++ V +E GA++++GTPGR+
Sbjct: 90 LVLCPTRELADQVASEIRRLARAQENIKVVTLCGGVPLRGQVASLEH-GAHVVVGTPGRV 148
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D +ER LD L VLDEADR+LDMGF + I+ + R P R+T LFSAT + +E
Sbjct: 149 MDHLER-GTLDLGALATFVLDEADRMLDMGFSEDIAQVARRCPDTRQTLLFSATYPDGIE 207
Query: 123 ELSKAGLRNPVRVEVRAE 140
+++ +++P R+ V+A+
Sbjct: 208 RIARQFMKDPQRIAVQAQ 225
>gi|160874026|ref|YP_001553342.1| DEAD/DEAH box helicase [Shewanella baltica OS195]
gi|160859548|gb|ABX48082.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS195]
Length = 525
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 89/135 (65%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL++Q+ + + LP ++S ++ GGV + + K+ G ++L+ TPGRL
Sbjct: 88 LVLTPTRELAAQVAESVETYGKNLP-LRSAVIFGGVPINPQIAKLRH-GVDVLVATPGRL 145
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + V F LEILVLDEADR+LDMGF + I I++ LPK R+ +FSAT ++ +
Sbjct: 146 MDLYNQKAV-KFSQLEILVLDEADRMLDMGFIRDIRKILAILPKQRQNLMFSATFSDEIR 204
Query: 123 ELSKAGLRNPVRVEV 137
EL+K + NPV + V
Sbjct: 205 ELAKGLVNNPVEISV 219
>gi|254780382|ref|YP_003064795.1| ATP dependent RNA helicase protein [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040059|gb|ACT56855.1| ATP dependent RNA helicase protein [Candidatus Liberibacter
asiaticus str. psy62]
Length = 465
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 98/157 (62%), Gaps = 8/157 (5%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+ PTREL++Q+ + + ++ LL+GG+ +A KK+E GA++LI TPGR+
Sbjct: 76 LILEPTRELAAQVADNFEKYGKNY-NLTVALLIGGIPFEAQNKKLER-GADVLICTPGRI 133
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D R +L N+EILV+DEADR+LDMGF I I S +P R+T LFSAT T+ ++
Sbjct: 134 LDHFNRGKLL-MNNIEILVIDEADRMLDMGFIPYIQNITSLVPFTRQTLLFSATMTDELQ 192
Query: 123 ELSKAGLRNPVRVEVR-----AESKSHHVSASSQQLA 154
++S+ L+NP R+EV AE+ H A+ Q +
Sbjct: 193 KVSENFLQNPKRIEVNTPSSTAETIEHCFVATYAQYS 229
>gi|406865242|gb|EKD18284.1| ATP-dependent RNA helicase DBP4 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1104
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 107/175 (61%), Gaps = 7/175 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL++QI+ V + I + L++GG ++ + +++ N+L+ TPGR
Sbjct: 124 ALIISPTRELATQIFQVLRK-IGRNHSFSAGLIIGGRSLQEERERLGR--MNILVCTPGR 180
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ M++ D +L++LVLDEADR++DMGFQ+ + I+ LPK R+T LFSATQT+ V
Sbjct: 181 ILQHMDQTADFDVSHLQMLVLDEADRIMDMGFQRDVDAIVEHLPKERQTMLFSATQTKKV 240
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
+L++ LR+P V V + S + ++ Q TPL L +++ +RN+
Sbjct: 241 SDLARLSLRDPEYVAVHEAATS--ATPTTLQQYVVVTPLAEKLNTLFSF--IRNN 291
>gi|403262859|ref|XP_003923784.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 isoform 1
[Saimiri boliviensis boliviensis]
Length = 869
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 145 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERIN--NINILVCTPGRL 201
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ +L++LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 202 LQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 261
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L+NP V V ++K
Sbjct: 262 DLARLSLKNPEYVWVHEKAK 281
>gi|325090235|gb|EGC43545.1| ATP-dependent rRNA helicase SPB4 [Ajellomyces capsulatus H88]
Length = 638
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 95/171 (55%), Gaps = 32/171 (18%)
Query: 2 GMIISPTRELSSQIYHVAQPFI-------------------------------STLPDVK 30
++ISPTREL++QIY+V + STL V
Sbjct: 59 AILISPTRELATQIYNVLLSLLAFHGPSAARLQLTENNSGEGDEPNPASSYPPSTLKIVP 118
Query: 31 SVLLVGGVEVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLL 89
+LL G D+ ++ N+L+ TPGRL +++ + E+LVLDEADRLL
Sbjct: 119 QLLLGGTTTPTQDLSTFLKQSPNVLVSTPGRLLELLSSPHAHCSQSSFEVLVLDEADRLL 178
Query: 90 DMGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAE 140
D+GF++ + I+ RLPK RRTGLFSA+ +EAV+++ + GLRNP+++ V+ +
Sbjct: 179 DLGFKEDLQKILQRLPKQRRTGLFSASVSEAVDQIIRVGLRNPIKIAVKVK 229
>gi|67525437|ref|XP_660780.1| hypothetical protein AN3176.2 [Aspergillus nidulans FGSC A4]
gi|74657377|sp|Q5B8F4.1|SPB4_EMENI RecName: Full=ATP-dependent rRNA helicase spb4
gi|40743753|gb|EAA62940.1| hypothetical protein AN3176.2 [Aspergillus nidulans FGSC A4]
gi|259485867|tpe|CBF83255.1| TPA: ATP-dependent rRNA helicase spb4 (EC 3.6.1.-)
[Source:UniProtKB/Swiss-Prot;Acc:Q5B8F4] [Aspergillus
nidulans FGSC A4]
Length = 638
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 92/157 (58%), Gaps = 26/157 (16%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSV------------------------LLVGG 37
+I+SPTREL+SQIY+V ++ P +V LL+GG
Sbjct: 90 AIIVSPTRELASQIYNVLTSLLAFHPASAAVINTSETEDVPRPKHSSSVLRVVPQLLLGG 149
Query: 38 VEVKA-DVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRN-LEILVLDEADRLLDMGFQK 95
A D+ + NLL+ TPGRL +++ V ++ E+LVLDEADRLLD+GF++
Sbjct: 150 STSPAEDLSTFLKRSPNLLVATPGRLLELLSSPHVYCPQSSFEMLVLDEADRLLDLGFKE 209
Query: 96 QISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNP 132
+ I+ RLPK RRTGLFSA+ +EAV+++ + GLRNP
Sbjct: 210 TLQNILRRLPKQRRTGLFSASVSEAVDQIVRVGLRNP 246
>gi|383854018|ref|XP_003702519.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Megachile rotundata]
Length = 453
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 95/143 (66%), Gaps = 2/143 (1%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+I++PTREL+ QI + S++ VK ++VGG+++ + I + ++LI TPG
Sbjct: 88 FALILTPTRELAFQISEQFEALGSSI-GVKCAVIVGGMDMMSQAL-ILAKKPHILIATPG 145
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D +E + R+L+ LV+DEADR+L+M F+ ++ I+ +P+ RRT LFSAT T+
Sbjct: 146 RLIDHLENTKGFNLRSLKFLVMDEADRILNMDFEVEVDKILRVIPRERRTLLFSATMTKK 205
Query: 121 VEELSKAGLRNPVRVEVRAESKS 143
V++L +A LRNPV+VEV + ++
Sbjct: 206 VQKLQRASLRNPVKVEVSTKYQT 228
>gi|340960708|gb|EGS21889.1| ATP-dependent RNA helicase-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 812
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 107/182 (58%), Gaps = 5/182 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ V + I + L++GG +K + +++ N+L+ TPGR
Sbjct: 124 ALIISPTRELAIQIFEVLRK-IGRHHYFSAGLVIGGKSLKEEAERLGR--MNILVCTPGR 180
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ +++ D NL+ILVLDEADR++DMGFQ+ + +I LPK R+T LFSATQ++ V
Sbjct: 181 MLQHLDQTANFDVNNLQILVLDEADRIMDMGFQQAVDALIEHLPKSRQTLLFSATQSKRV 240
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNHHNLLI 181
+L++ L++P V V E+ A+ QQ TPL L+ +W + +L+
Sbjct: 241 SDLARLSLKDPEYVSVH-EAAPTATPATLQQHYIV-TPLHEKLDTLWGFLRSNLKSKILV 298
Query: 182 CL 183
L
Sbjct: 299 FL 300
>gi|152999406|ref|YP_001365087.1| DEAD/DEAH box helicase [Shewanella baltica OS185]
gi|151364024|gb|ABS07024.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS185]
Length = 525
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 89/135 (65%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL++Q+ + + LP ++S ++ GGV + + K+ G ++L+ TPGRL
Sbjct: 88 LVLTPTRELAAQVAESVETYGKNLP-LRSAVIFGGVPINPQIAKLRH-GVDVLVATPGRL 145
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + V F LEILVLDEADR+LDMGF + I I++ LPK R+ +FSAT ++ +
Sbjct: 146 MDLYNQKAV-KFSQLEILVLDEADRMLDMGFIRDIRKILAILPKQRQNLMFSATFSDEIR 204
Query: 123 ELSKAGLRNPVRVEV 137
EL+K + NPV + V
Sbjct: 205 ELAKGLVNNPVEISV 219
>gi|332284754|ref|YP_004416665.1| ATP-dependent RNA helicase DbpA [Pusillimonas sp. T7-7]
gi|330428707|gb|AEC20041.1| ATP-dependent RNA helicase DbpA [Pusillimonas sp. T7-7]
Length = 444
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 85/135 (62%), Gaps = 2/135 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTRELS Q+ + + + ++K + L GG ++ ++ ++ GA++++GTPGRL
Sbjct: 58 LVLCPTRELSEQVANELRRLARAIGNIKVITLCGGTPIRPQIESLKF-GAHIVVGTPGRL 116
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D +ER D +DF L LVLDEADR+LDMGF ++ I+ P R+T LFSAT + +
Sbjct: 117 MDHIER-DTVDFSGLHTLVLDEADRMLDMGFYDDVTKIVGSCPGTRQTQLFSATYADDIR 175
Query: 123 ELSKAGLRNPVRVEV 137
+ S LR P V+V
Sbjct: 176 KASARFLRKPKEVKV 190
>gi|375109850|ref|ZP_09756089.1| ATP-dependent RNA helicase [Alishewanella jeotgali KCTC 22429]
gi|374570019|gb|EHR41163.1| ATP-dependent RNA helicase [Alishewanella jeotgali KCTC 22429]
Length = 416
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 90/136 (66%), Gaps = 3/136 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I++PTREL++Q+ AQ + LP ++S L+ GGV++ + + + G ++LI TPGR
Sbjct: 80 ALILTPTRELAAQVAESAQLYGKHLP-LRSTLVFGGVKINPQMMALRK-GVDILIATPGR 137
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D+ ++ + + F LEILVLDEADR+LDMGF + I I++ LP R+ LFSAT +E +
Sbjct: 138 LLDLYQQ-NAVRFNQLEILVLDEADRMLDMGFIRDIKKILALLPPKRQNLLFSATFSEEI 196
Query: 122 EELSKAGLRNPVRVEV 137
L+K L P+ V V
Sbjct: 197 RTLAKGLLHEPLEVTV 212
>gi|354584019|ref|ZP_09002916.1| DEAD/DEAH box helicase domain protein [Paenibacillus lactis 154]
gi|353197281|gb|EHB62774.1| DEAD/DEAH box helicase domain protein [Paenibacillus lactis 154]
Length = 490
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 90/136 (66%), Gaps = 3/136 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+++SPTREL+ QI + + S ++S +VGGV K + +++ GA++LI TPGR
Sbjct: 78 ALVLSPTRELALQISDNVKAY-SQFTKLRSTAIVGGVSQKTQERALQQ-GADILIATPGR 135
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D++ + V D +++EILVLDEADR+LDMGF + II+++P ++T FSAT +
Sbjct: 136 LIDLINQKHV-DLQHVEILVLDEADRMLDMGFIHDVKRIIAKMPSKKQTLFFSATMPSEI 194
Query: 122 EELSKAGLRNPVRVEV 137
+L K L NPV+VE+
Sbjct: 195 TQLVKTLLHNPVKVEI 210
>gi|169608057|ref|XP_001797448.1| hypothetical protein SNOG_07095 [Phaeosphaeria nodorum SN15]
gi|118575178|sp|Q0UMB9.1|DBP4_PHANO RecName: Full=ATP-dependent RNA helicase DBP4
gi|111064626|gb|EAT85746.1| hypothetical protein SNOG_07095 [Phaeosphaeria nodorum SN15]
Length = 803
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 103/182 (56%), Gaps = 4/182 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+SPTREL+ QI+ V + LL+GG ++++ + + N+L+ TPGR
Sbjct: 125 ALILSPTRELAIQIFDVLCKIGKHGHMFAAGLLIGGKSLESERQALPR--MNILVATPGR 182
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ + + +L++LVLDEADR+LDMGFQ+ + II LPK R+T LFSATQ++ V
Sbjct: 183 MLQHLSQTAAFLVDDLKMLVLDEADRILDMGFQRDVDAIIDYLPKERQTLLFSATQSKKV 242
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNHHNLLI 181
+L++ L++P V V AE KS + S Q PL L+ +W+ Q +L+
Sbjct: 243 SDLARLSLQDPEYVSVHAEDKS--ATPKSLQQNYIICPLEEKLDTLWSFIQASKKSKILV 300
Query: 182 CL 183
Sbjct: 301 FF 302
>gi|225680133|gb|EEH18417.1| ATP-dependent RNA helicase dbp4 [Paracoccidioides brasiliensis
Pb03]
Length = 816
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 102/173 (58%), Gaps = 15/173 (8%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+++SPTREL+ QI+ V + I + L++GG ++ + +++ N+L+ TPGR
Sbjct: 124 ALVLSPTRELAIQIFEVLRK-IGRHHSFSAGLVIGGKSLQEEQERLGR--MNILVCTPGR 180
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ M++ D +++LVLDEADR++DMGFQ + I+ LPK R+T LFSATQT+ V
Sbjct: 181 MLQHMDQTAAFDTNRIQLLVLDEADRIMDMGFQNTVDAIVEHLPKERQTMLFSATQTQKV 240
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSK-----TPLGLHLEVIWN 169
+L++ LR+P + V H +ASS A + TPL L+ +W+
Sbjct: 241 SDLARLSLRDPEYISV-------HEAASSATPAKLQQNYIVTPLPEKLDTLWS 286
>gi|110680325|ref|YP_683332.1| ATP-dependent RNA helicase [Roseobacter denitrificans OCh 114]
gi|109456441|gb|ABG32646.1| putative ATP-dependent RNA helicase, putative [Roseobacter
denitrificans OCh 114]
Length = 433
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 105/168 (62%), Gaps = 7/168 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G++++PTREL++QI + F VK ++VGG + +K++E G +LL+ TPGR
Sbjct: 78 GLVLAPTRELATQISVNLRSFAENT-KVKVAMVVGGQSINNQIKRLER-GVDLLVATPGR 135
Query: 62 LYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
L D+M+R V LD LVLDEAD++LDMGF + I S +PK R+T LFSAT +
Sbjct: 136 LLDLMDRRAVRLD--EAVFLVLDEADQMLDMGFIHDLRKIASVIPKERQTMLFSATMPKQ 193
Query: 121 VEELSKAGLRNPVRVEVRAESK-SHHVSASSQQLASSKTPLGLHLEVI 167
+ EL+ + LR+P+RVEV K + V+ +A S+ P GL +E++
Sbjct: 194 MNELANSYLRSPIRVEVSPPGKAADKVTQEVHFIAKSEKP-GLLIEML 240
>gi|403352245|gb|EJY75628.1| ATP-dependent RNA helicase Has1 [Oxytricha trifallax]
Length = 650
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 93/145 (64%), Gaps = 2/145 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+II+PTREL+ Q Y A+ + V+ +GG + ++ +++ G NLL+ TPGRL
Sbjct: 243 IIIAPTRELAMQNYKWARDLLQYHSKTHGVV-IGGAKRSSEANMLKK-GVNLLVATPGRL 300
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++ F NL++L++DEAD +L +GF+++++ II LPK R T LFSAT T+ VE
Sbjct: 301 LDHLQNTPGFLFHNLQMLIIDEADAILKVGFEEEMNQIIKLLPKERVTCLFSATMTKKVE 360
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVS 147
+L + L+NPV +EV +S + VS
Sbjct: 361 DLCRLSLKNPVLIEVSKDSNTSTVS 385
>gi|83942539|ref|ZP_00955000.1| DEAD/DEAH box helicase [Sulfitobacter sp. EE-36]
gi|83846632|gb|EAP84508.1| DEAD/DEAH box helicase [Sulfitobacter sp. EE-36]
Length = 433
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 92/142 (64%), Gaps = 3/142 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G++++PTREL++QI + F +K++++VGG + +K++E G +LL+ TPGR
Sbjct: 78 GLVLAPTRELANQIMENLKGFCEGT-QLKTMMIVGGQSINPQIKRMER-GVDLLVATPGR 135
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D+M+R VL LVLDEAD++LDMGF + I + LPK R+T LFSAT + +
Sbjct: 136 LLDLMDRRAVL-LHKTTFLVLDEADQMLDMGFIHDLRKIAAVLPKERQTMLFSATMPKLM 194
Query: 122 EELSKAGLRNPVRVEVRAESKS 143
E++ + L +P+R+EV K+
Sbjct: 195 NEIANSYLNSPIRIEVSPPGKA 216
>gi|29351661|gb|AAH49217.1| DDX10 protein, partial [Homo sapiens]
Length = 745
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 145 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERIN--NINILVCTPGRL 201
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ +L++LVLDEADR+LDMGF ++ +I LPK R+T LFSATQT++V+
Sbjct: 202 LQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSATQTKSVK 261
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L+NP V V ++K
Sbjct: 262 DLARLSLKNPEYVWVHEKAK 281
>gi|261404961|ref|YP_003241202.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus sp.
Y412MC10]
gi|261281424|gb|ACX63395.1| DEAD/DEAH box helicase domain protein [Paenibacillus sp. Y412MC10]
Length = 506
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 90/136 (66%), Gaps = 3/136 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+++SPTREL+ QI + + S ++S +VGGV K + +++ GA++LI TPGR
Sbjct: 78 ALVLSPTRELALQISDNVKAY-SQFTKLRSTAIVGGVSQKTQERALQQ-GADILIATPGR 135
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D+M + V D +++EILVLDEADR+LDMGF + II+++P ++T FSAT +
Sbjct: 136 LLDLMNQKHV-DLQHVEILVLDEADRMLDMGFIHDVKRIIAKMPSKKQTLFFSATMPAEI 194
Query: 122 EELSKAGLRNPVRVEV 137
+L + L NPV+VE+
Sbjct: 195 TQLVQTLLHNPVKVEI 210
>gi|426370364|ref|XP_004052135.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 [Gorilla
gorilla gorilla]
Length = 846
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 119 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERIN--NINILVCTPGRL 175
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ +L++LVLDEADR+LDMGF ++ +I LPK R+T LFSATQT++V+
Sbjct: 176 LQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSATQTKSVK 235
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L+NP V V ++K
Sbjct: 236 DLARLSLKNPEYVWVHEKAK 255
>gi|429765433|ref|ZP_19297729.1| putative ATP-dependent RNA helicase RhlE [Clostridium celatum DSM
1785]
gi|429186393|gb|EKY27337.1| putative ATP-dependent RNA helicase RhlE [Clostridium celatum DSM
1785]
Length = 426
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 92/145 (63%), Gaps = 3/145 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I++PTREL+ QI + L D+K+ ++ GGV + V+KI G ++L+ TPGR
Sbjct: 77 ALIVAPTRELAIQIEENFTIYAKYL-DIKNTVIFGGVNQTSQVRKINA-GVDVLVATPGR 134
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D++ + + D N++ VLDEADR+LDMG + IIS+LPK R+ LFSAT + V
Sbjct: 135 LLDLVNQRHI-DLSNVKYFVLDEADRMLDMGMIHDVKKIISKLPKERQNLLFSATMPKEV 193
Query: 122 EELSKAGLRNPVRVEVRAESKSHHV 146
+L + L+NPV+VEV+ S + +
Sbjct: 194 TKLVNSILKNPVKVEVQPVSSTAEI 218
>gi|395844018|ref|XP_003794763.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 isoform 1
[Otolemur garnettii]
Length = 869
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 145 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKQEAERIN--NINILVCTPGRL 201
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL++LVLDEADR+LDMGF ++ II LP+ R+T LFSATQT++V+
Sbjct: 202 LQHMDETVSFHATNLQMLVLDEADRILDMGFADTMNAIIENLPRKRQTLLFSATQTKSVK 261
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L++P V V ++K
Sbjct: 262 DLARLSLKDPEYVWVHEKAK 281
>gi|340719056|ref|XP_003397973.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Bombus
terrestris]
Length = 458
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 96/143 (67%), Gaps = 2/143 (1%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+I++PTREL+ QI + S++ VK ++VGG+++ + + ++ ++LI TPG
Sbjct: 93 FALILTPTRELAFQISEQFEALGSSI-GVKCAVIVGGMDMMSQALLLAKK-PHILIATPG 150
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D +E + R+L+ LV+DEADR+L+M F+ ++ I+ +P+ RRT LFSAT T+
Sbjct: 151 RLVDHLENTKGFNLRSLKFLVMDEADRILNMDFEVEVDKILRVIPRERRTLLFSATMTKK 210
Query: 121 VEELSKAGLRNPVRVEVRAESKS 143
V++L +A LRNPV+VEV + ++
Sbjct: 211 VQKLQRASLRNPVKVEVSTKYQT 233
>gi|1142710|gb|AAC50823.1| similar to DEAD box RNA helicases [Homo sapiens]
gi|1589113|prf||2210303A RNA helicase
Length = 875
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 145 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERIN--NINILVCTPGRL 201
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ +L++LVLDEADR+LDMGF ++ +I LPK R+T LFSATQT++V+
Sbjct: 202 LQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSATQTKSVK 261
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L+NP V V ++K
Sbjct: 262 DLARLSLKNPEYVWVHEKAK 281
>gi|350398997|ref|XP_003485378.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Bombus
impatiens]
Length = 453
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 96/143 (67%), Gaps = 2/143 (1%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+I++PTREL+ QI + S++ VK ++VGG+++ + + ++ ++LI TPG
Sbjct: 88 FALILTPTRELAFQISEQFEALGSSI-GVKCAVIVGGMDMMSQALLLAKK-PHILIATPG 145
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D +E + R+L+ LV+DEADR+L+M F+ ++ I+ +P+ RRT LFSAT T+
Sbjct: 146 RLVDHLENTKGFNLRSLKFLVMDEADRILNMDFEVEVDKILRVIPRERRTLLFSATMTKK 205
Query: 121 VEELSKAGLRNPVRVEVRAESKS 143
V++L +A LRNPV+VEV + ++
Sbjct: 206 VQKLQRASLRNPVKVEVSTKYQT 228
>gi|310801624|gb|EFQ36517.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 480
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 92/139 (66%), Gaps = 6/139 (4%)
Query: 1 MGMIISPTRELSSQIYHVAQPF--ISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGT 58
G++++PTREL++QI Q F + +L +++ ++VGG+++ A + ++ ++++ T
Sbjct: 122 FGLVLAPTRELAAQI---GQQFEALGSLISLRTAVIVGGLDMVAQAIALGKK-PHVIVAT 177
Query: 59 PGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQT 118
PGRL D +E+ R+L+ LV+DEADRLLDM F I I+ +P+ RRT LFSAT +
Sbjct: 178 PGRLVDHLEKTKGFSLRSLKYLVMDEADRLLDMDFGPSIDKILKFIPRERRTFLFSATMS 237
Query: 119 EAVEELSKAGLRNPVRVEV 137
+E L +A LR+PVRV +
Sbjct: 238 SKIESLQRASLRDPVRVSI 256
>gi|282599579|ref|ZP_05971084.2| ATP-dependent RNA helicase RhlE [Providencia rustigianii DSM 4541]
gi|282568585|gb|EFB74120.1| ATP-dependent RNA helicase RhlE [Providencia rustigianii DSM 4541]
Length = 457
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 91/135 (67%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++Q+ + + L +++S ++ GGV + + K+ G ++LI TPGRL
Sbjct: 87 LILTPTRELAAQVAENVKEYSRHL-NIRSFVVFGGVSINPQMMKLRS-GVDVLIATPGRL 144
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D +E + +D +EILVLDEADR+LDMGF I +I++LPK R+ LFSAT ++ ++
Sbjct: 145 LD-LEHQNAVDLSQVEILVLDEADRMLDMGFIHDIRRVITKLPKKRQNLLFSATFSDDIK 203
Query: 123 ELSKAGLRNPVRVEV 137
+L+ L NPV +EV
Sbjct: 204 QLASKLLNNPVSIEV 218
>gi|83953760|ref|ZP_00962481.1| DEAD/DEAH box helicase [Sulfitobacter sp. NAS-14.1]
gi|83841705|gb|EAP80874.1| DEAD/DEAH box helicase [Sulfitobacter sp. NAS-14.1]
Length = 444
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 92/142 (64%), Gaps = 3/142 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G++++PTREL++QI + F +K++++VGG + +K++E G +LL+ TPGR
Sbjct: 89 GLVLAPTRELANQIMENLKGFCEGT-QLKTMMIVGGQSINPQIKRMER-GVDLLVATPGR 146
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D+M+R VL LVLDEAD++LDMGF + I + LPK R+T LFSAT + +
Sbjct: 147 LLDLMDRRAVL-LHKTTFLVLDEADQMLDMGFIHDLRKIAAVLPKERQTMLFSATMPKLM 205
Query: 122 EELSKAGLRNPVRVEVRAESKS 143
E++ + L +P+R+EV K+
Sbjct: 206 NEIANSYLNSPIRIEVSPPGKA 227
>gi|149910902|ref|ZP_01899534.1| putative ATP-dependent RNA helicase, DEAD boxfamily [Moritella sp.
PE36]
gi|149806056|gb|EDM66039.1| putative ATP-dependent RNA helicase, DEAD boxfamily [Moritella sp.
PE36]
Length = 431
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 94/138 (68%), Gaps = 7/138 (5%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPD--VKSVLLVGGVEVKADVKKIEEEGANLLIGTP 59
+I++PTRELS Q++ + F++ D + S L+ GGV + VK + + GA++L+ TP
Sbjct: 83 ALILTPTRELSQQVH---KSFVTYSEDSELTSELVYGGVSINPQVKALVQ-GADILVATP 138
Query: 60 GRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTE 119
GRL D+++R + L +E +V DEADR+LDMGF ++I I+ LPK R+T LFSAT +
Sbjct: 139 GRLLDLLDR-ETLTLEFVEKIVFDEADRMLDMGFMEEIRRILKHLPKKRQTMLFSATFDD 197
Query: 120 AVEELSKAGLRNPVRVEV 137
A+ +LSK+ L +P+ VEV
Sbjct: 198 AIFKLSKSLLNDPLLVEV 215
>gi|429863811|gb|ELA38218.1| ATP-dependent rRNA helicase spb4 [Colletotrichum gloeosporioides
Nara gc5]
Length = 631
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 91/164 (55%), Gaps = 23/164 (14%)
Query: 1 MGMIISPTRELSSQIYHVAQ-------PFISTLPDVK--------------SVLLVGG-V 38
+I+SPTREL+ QI+ V Q P LP +K LLVGG
Sbjct: 88 FAIIVSPTRELAIQIHSVLQALVGFHPPSAEILPHLKEDEKRPDTNVPVIVPQLLVGGNT 147
Query: 39 EVKADVKKIEEEGANLLIGTPGRLYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQI 97
+ D+ N+L+ TPGRL +++ V E+ ++DEADRLLDMGF++ I
Sbjct: 148 TTQQDLSFFVRHAPNVLVSTPGRLVELLASPHVHCTQATFELFIMDEADRLLDMGFKQDI 207
Query: 98 SYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAES 141
I+ LPK RRTGLFSA+ +EAV ++ GLRNPV++ VR +S
Sbjct: 208 QRILGYLPKQRRTGLFSASVSEAVSQIITVGLRNPVKIAVRVKS 251
>gi|329926082|ref|ZP_08280693.1| ATP-dependent RNA helicase RhlE [Paenibacillus sp. HGF5]
gi|328939480|gb|EGG35833.1| ATP-dependent RNA helicase RhlE [Paenibacillus sp. HGF5]
Length = 506
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 90/136 (66%), Gaps = 3/136 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+++SPTREL+ QI + + S ++S +VGGV K + +++ GA++LI TPGR
Sbjct: 78 ALVLSPTRELALQISDNVKAY-SQFTKLRSTAIVGGVSQKTQERALQQ-GADILIATPGR 135
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D+M + V D +++EILVLDEADR+LDMGF + II+++P ++T FSAT +
Sbjct: 136 LLDLMNQKHV-DLQHVEILVLDEADRMLDMGFIHDVKRIIAKMPSKKQTLFFSATMPAEI 194
Query: 122 EELSKAGLRNPVRVEV 137
+L + L NPV+VE+
Sbjct: 195 TQLVQTLLHNPVKVEI 210
>gi|301122737|ref|XP_002909095.1| ATP-dependent RNA helicase dbp4, putative [Phytophthora infestans
T30-4]
gi|262099857|gb|EEY57909.1| ATP-dependent RNA helicase dbp4, putative [Phytophthora infestans
T30-4]
Length = 524
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 102/170 (60%), Gaps = 11/170 (6%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++I+PTREL+ QI+ V + + + L++GG + + ++ NLLI TPGR
Sbjct: 134 ALVIAPTRELALQIFEVLRN-VGKAHAFSAGLVIGGKNFREEQLRLIR--MNLLICTPGR 190
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKL--RRTGLFSATQTE 119
L ME+ D NL++LVLDEADR+LD+GFQKQ++ I+ LP R+T LFSATQT+
Sbjct: 191 LLQHMEQTPAFDASNLQVLVLDEADRILDLGFQKQLTSILEHLPPAGERQTMLFSATQTK 250
Query: 120 AVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSK--TPLGLHLEVI 167
+V++L+ LR P V V H +A+ + L S TPL L+V+
Sbjct: 251 SVKDLAALSLREPEYVAVH----EHSANATPKGLQQSYVVTPLERKLDVL 296
>gi|154286470|ref|XP_001544030.1| hypothetical protein HCAG_01076 [Ajellomyces capsulatus NAm1]
gi|150407671|gb|EDN03212.1| hypothetical protein HCAG_01076 [Ajellomyces capsulatus NAm1]
Length = 721
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 104/170 (61%), Gaps = 9/170 (5%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+++SPTREL+ QI+ V + I + L++GG ++ + +++ + N+L+ TPGR
Sbjct: 124 ALVLSPTRELAIQIFEVLRK-IGRHHTFSAGLVIGGKGLQEEQERLGK--MNILVCTPGR 180
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ M++ D ++++LVLDEADR++DMGFQ + II LPK R+T LFSATQT+ V
Sbjct: 181 MLQHMDQTAAFDTNHIQLLVLDEADRIMDMGFQSTVDAIIDHLPKERQTMLFSATQTKKV 240
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSK--TPLGLHLEVIWN 169
+L++ LR+P V V + SA+ +L + TPL L+ +W+
Sbjct: 241 SDLARLSLRDPEYVSVHETA----ASATPAKLQQNYIITPLPEKLDTLWS 286
>gi|311748030|ref|ZP_07721815.1| ATP-dependent RNA helicase RhlE [Algoriphagus sp. PR1]
gi|126575012|gb|EAZ79370.1| ATP-dependent RNA helicase RhlE [Algoriphagus sp. PR1]
Length = 379
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 95/138 (68%), Gaps = 4/138 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPD-VKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+++ PTREL++Q+ VA F L +K++ + GGV + + K+ G ++L+ TPGR
Sbjct: 79 LVLVPTRELAAQVAQVADNFSRFLERRIKTLAVFGGVSINPQMMKLN--GTDILVATPGR 136
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D++ + + L ++EILVLDE D++L+MGF++++ I++ +PK R+T LFSATQ E +
Sbjct: 137 LLDLLSK-NALSISDVEILVLDEMDKVLNMGFREEVDQILADIPKNRQTILFSATQDETL 195
Query: 122 EELSKAGLRNPVRVEVRA 139
EE+ + L++P R+ V+A
Sbjct: 196 EEVISSLLKDPKRISVKA 213
>gi|121595996|ref|YP_987892.1| DEAD/DEAH box helicase domain-containing protein [Acidovorax sp.
JS42]
gi|120608076|gb|ABM43816.1| ATP-dependent RNA helicase DbpA [Acidovorax sp. JS42]
Length = 469
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 90/146 (61%), Gaps = 2/146 (1%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G+++ PTREL+ Q+ + ++K V + GGV + + +E GA++++GTPGR
Sbjct: 85 GLVLCPTRELADQVATEIRRLARAQDNIKVVTVYGGVPSRGQIASLEN-GAHIVVGTPGR 143
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ D+MER LD NL+ LVLDEADR+LDMGF I ++ + P R+T LFSAT + +
Sbjct: 144 VMDLMERGK-LDIANLKTLVLDEADRMLDMGFLADIETVVRQCPAERQTLLFSATYPDGI 202
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVS 147
L++ +R P V+V A+ + ++
Sbjct: 203 AGLAQRFMRAPQMVKVAAQHGAGKIA 228
>gi|397516334|ref|XP_003828385.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 [Pan paniscus]
Length = 904
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 173 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERIN--NINILVCTPGRL 229
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ +L++LVLDEADR+LDMGF ++ +I LPK R+T LFSATQT++V+
Sbjct: 230 LQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSATQTKSVK 289
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L+NP V V ++K
Sbjct: 290 DLARLSLKNPEYVWVHEKAK 309
>gi|88801632|ref|ZP_01117160.1| putative ATP-dependent RNA helicase [Polaribacter irgensii 23-P]
gi|88782290|gb|EAR13467.1| putative ATP-dependent RNA helicase [Polaribacter irgensii 23-P]
Length = 432
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 94/142 (66%), Gaps = 3/142 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++++PTREL++Q++ + + S D+KS ++ GGV K + + G ++L+ TPGR
Sbjct: 76 ALVLTPTRELAAQVHDNVREY-SKYVDIKSTVVFGGVNAKPQIATLRS-GVDILVATPGR 133
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D+ ++ L F+ +E+L+LDEADR+LDMGF + I+ IIS +P R+ +FSAT + +
Sbjct: 134 LLDLHDQK-ALSFKRVEVLILDEADRMLDMGFVRDINKIISFMPAKRQNLMFSATFSNDI 192
Query: 122 EELSKAGLRNPVRVEVRAESKS 143
++L+ LR+PV VE ++ +
Sbjct: 193 KKLASGILRDPVSVETAPQNST 214
>gi|444723572|gb|ELW64223.1| putative ATP-dependent RNA helicase DDX10 [Tupaia chinensis]
Length = 663
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 91/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + I D + L++GG ++K + ++I N+L+ T GRL
Sbjct: 147 LIISPTRELAYQTFEVLRK-IGKNHDFSAGLIIGGKDLKHEAERIN--NINILVCTLGRL 203
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL++LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 204 LQHMDETVCFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 263
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L+NP V V ++K
Sbjct: 264 DLARLSLKNPEYVWVHEKAK 283
>gi|171683441|ref|XP_001906663.1| hypothetical protein [Podospora anserina S mat+]
gi|170941680|emb|CAP67334.1| unnamed protein product [Podospora anserina S mat+]
Length = 816
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 101/167 (60%), Gaps = 5/167 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ QI+ V + I + L++GG +K + ++ N+L+ TPGR+
Sbjct: 138 LIISPTRELAVQIFEVLRK-IGRNHVFSAGLVIGGKSLKEEADRLGR--MNILVCTPGRM 194
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+++ D NL++LVLDEADR++DMGFQ + ++ LPK R+T LFSATQ++ V
Sbjct: 195 LQHLDQTAGFDVNNLQMLVLDEADRIMDMGFQSAVDALVEHLPKTRQTMLFSATQSKRVS 254
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWN 169
+L++ L++P V E+ + + ++ Q + TPL L+ +W
Sbjct: 255 DLARLSLKDPEYVSAHEEAPT--ATPTNLQQSYIVTPLPEKLDTLWG 299
>gi|410625232|ref|ZP_11336020.1| ATP-dependent RNA helicase [Glaciecola mesophila KMM 241]
gi|410155363|dbj|GAC22789.1| ATP-dependent RNA helicase [Glaciecola mesophila KMM 241]
Length = 455
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 93/138 (67%), Gaps = 3/138 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G+I++PTREL++Q+ + + F ST +++S + GGV ++ + +++E G ++LI TPGR
Sbjct: 76 GLIVTPTRELAAQVANSVEIF-STQLNIRSCAVFGGVRIEPQLAQLQE-GVDMLIATPGR 133
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D+ E+ V F NLE+ VLDEADR+LD+GF + + I S LP R+T +FSAT ++ +
Sbjct: 134 LLDLYEQRAV-HFENLEVFVLDEADRMLDLGFIEDVKRIHSLLPVKRQTLMFSATFSKEI 192
Query: 122 EELSKAGLRNPVRVEVRA 139
+ ++ L P +EV A
Sbjct: 193 KHFAREMLNAPKTIEVTA 210
>gi|396488909|ref|XP_003842973.1| similar to ATP-dependent RNA helicase DRS1 [Leptosphaeria maculans
JN3]
gi|312219551|emb|CBX99494.1| similar to ATP-dependent RNA helicase DRS1 [Leptosphaeria maculans
JN3]
Length = 811
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 59/150 (39%), Positives = 91/150 (60%), Gaps = 4/150 (2%)
Query: 4 IISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLY 63
I PTREL+ Q ++VA +++ D+ L+ GG K D + + + +++I TPGR
Sbjct: 356 IFMPTRELAVQCFNVATK-LASFTDITFALMAGGFSTK-DQEAVLKTRPDVVIATPGRFI 413
Query: 64 DIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVEE 123
D M +LEILVLDEADR+L+ GF+ Q++ I++ +PK R+T LFSAT T V+
Sbjct: 414 DHMHNTAAFQVEHLEILVLDEADRMLEEGFESQLNEILTTIPKSRQTMLFSATMTSTVDR 473
Query: 124 LSKAGLRNPVRVEVRAESKSHHVSASSQQL 153
L + G+ PVR+ V ++K H V +Q+
Sbjct: 474 LIRIGMDKPVRLMV--DAKKHTVKGLTQEF 501
>gi|255726906|ref|XP_002548379.1| ATP-dependent rRNA helicase SPB4 [Candida tropicalis MYA-3404]
gi|240134303|gb|EER33858.1| ATP-dependent rRNA helicase SPB4 [Candida tropicalis MYA-3404]
Length = 553
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 94/146 (64%), Gaps = 6/146 (4%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLP-DVKSV---LLVGGV-EVKADVKKIEEEGANLL 55
+ ++++PTREL++QI V + LP D KS+ LLVG + V+ D+ + +L
Sbjct: 95 LSIVLAPTRELANQIQSVFDNVLQYLPSDYKSINTQLLVGSMGTVREDIDNFLKNQPQIL 154
Query: 56 IGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
IGTPGR+ D + V +LEI +LDEAD+LLD F+ + I+ +LPK RRTGLFSA
Sbjct: 155 IGTPGRILDFLGSQYV-KTNSLEIAILDEADKLLDCSFETDVVNILRKLPKQRRTGLFSA 213
Query: 116 TQTEAVEELSKAGLRNPVRVEVRAES 141
T + A + + + G+ NPV+V+V++++
Sbjct: 214 TLSSAGDTIFRTGMNNPVKVQVKSKN 239
>gi|327273954|ref|XP_003221744.1| PREDICTED: probable ATP-dependent RNA helicase DDX10-like [Anolis
carolinensis]
Length = 851
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 91/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + +I N+LI TPGRL
Sbjct: 144 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLVIGGKDLKQEADRIH--NINILICTPGRL 200
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ +L++L+LDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 201 LQHMDETSYFYASDLQMLILDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 260
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L++P V V ++K
Sbjct: 261 DLARLSLKDPEYVWVHEKAK 280
>gi|13514831|ref|NP_004389.2| probable ATP-dependent RNA helicase DDX10 [Homo sapiens]
gi|76803554|sp|Q13206.2|DDX10_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX10; AltName:
Full=DEAD box protein 10
gi|11414894|dbj|BAB18536.1| RNA helicase [Homo sapiens]
gi|60552874|gb|AAH91521.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Homo sapiens]
gi|62739421|gb|AAH93654.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Homo sapiens]
gi|62739423|gb|AAH93656.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Homo sapiens]
gi|119587526|gb|EAW67122.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10, isoform CRA_a [Homo
sapiens]
gi|189054819|dbj|BAG37650.1| unnamed protein product [Homo sapiens]
Length = 875
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 145 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERIN--NINILVCTPGRL 201
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ +L++LVLDEADR+LDMGF ++ +I LPK R+T LFSATQT++V+
Sbjct: 202 LQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSATQTKSVK 261
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L+NP V V ++K
Sbjct: 262 DLARLSLKNPEYVWVHEKAK 281
>gi|114640235|ref|XP_001141618.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 [Pan
troglodytes]
gi|410221128|gb|JAA07783.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Pan troglodytes]
gi|410260526|gb|JAA18229.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Pan troglodytes]
gi|410287964|gb|JAA22582.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Pan troglodytes]
gi|410335061|gb|JAA36477.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Pan troglodytes]
Length = 875
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 145 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERIN--NINILVCTPGRL 201
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ +L++LVLDEADR+LDMGF ++ +I LPK R+T LFSATQT++V+
Sbjct: 202 LQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSATQTKSVK 261
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L+NP V V ++K
Sbjct: 262 DLARLSLKNPEYVWVHEKAK 281
>gi|67527984|ref|XP_661837.1| hypothetical protein AN4233.2 [Aspergillus nidulans FGSC A4]
gi|74681080|sp|Q5B5E7.1|RRP3_EMENI RecName: Full=ATP-dependent rRNA helicase rrp3
gi|40740142|gb|EAA59332.1| hypothetical protein AN4233.2 [Aspergillus nidulans FGSC A4]
gi|259481158|tpe|CBF74430.1| TPA: ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)
[Source:UniProtKB/Swiss-Prot;Acc:Q5B5E7] [Aspergillus
nidulans FGSC A4]
Length = 465
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 90/143 (62%), Gaps = 2/143 (1%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
G++++PTREL+ QI + ST+ V+ ++VGG+++ A + ++ ++++ TPG
Sbjct: 116 FGLVLAPTRELAYQISQAFETLGSTI-GVRCAVIVGGMDMVAQSIALGKK-PHIIVATPG 173
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D +E RNL+ L +DEADRLLDM F + + II LP+ R T LFSAT +
Sbjct: 174 RLLDHLENTKGFSLRNLKYLAIDEADRLLDMDFGESLDKIIRILPRTRHTYLFSATMSTK 233
Query: 121 VEELSKAGLRNPVRVEVRAESKS 143
VE L +A L NPVRV V ++ ++
Sbjct: 234 VESLQRASLSNPVRVSVSSKYQT 256
>gi|240275036|gb|EER38551.1| ATP-dependent RNA helicase DBP4 [Ajellomyces capsulatus H143]
Length = 811
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 104/171 (60%), Gaps = 9/171 (5%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+++SPTREL+ QI+ V + I + L++GG ++ + +++ + N+L+ TPGR
Sbjct: 124 ALVLSPTRELAIQIFEVLRK-IGRHHTFSAGLVIGGKGLQEEQERLGK--MNILVCTPGR 180
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ M++ D ++++LVLDEADR++DMGFQ + II LPK R+T LFSATQT+ V
Sbjct: 181 MLQHMDQTAAFDTNHIQLLVLDEADRIMDMGFQSTVDAIIDHLPKERQTMLFSATQTKKV 240
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSK--TPLGLHLEVIWNV 170
+L++ LR+P V V + SA+ +L + TPL L+ +W+
Sbjct: 241 SDLARLSLRDPEYVSVHETA----ASATPAKLQQNYIITPLPEKLDTLWSF 287
>gi|62089354|dbj|BAD93121.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 variant [Homo sapiens]
Length = 845
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 155 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERIN--NINILVCTPGRL 211
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ +L++LVLDEADR+LDMGF ++ +I LPK R+T LFSATQT++V+
Sbjct: 212 LQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSATQTKSVK 271
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L+NP V V ++K
Sbjct: 272 DLARLSLKNPEYVWVHEKAK 291
>gi|114320766|ref|YP_742449.1| DEAD/DEAH box helicase domain-containing protein [Alkalilimnicola
ehrlichii MLHE-1]
gi|114227160|gb|ABI56959.1| DEAD/DEAH box helicase domain protein [Alkalilimnicola ehrlichii
MLHE-1]
Length = 427
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 95/141 (67%), Gaps = 3/141 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++Q+ + + LP +K+ ++ GGV + ++ + G ++++ TPGRL
Sbjct: 78 LILTPTRELAAQVRDSVKTYGGKLP-LKTAVIFGGVGMNPQIQTLRR-GVDIVVATPGRL 135
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D M + V D +E+LVLDEADR+LDMGF + I +I+ +PK R+T +FSAT ++ +
Sbjct: 136 LDHMGQGTV-DLSGVEMLVLDEADRMLDMGFIRDIRRVIAAVPKQRQTLMFSATFSKEIR 194
Query: 123 ELSKAGLRNPVRVEVRAESKS 143
+L++ LRNP ++EV A + +
Sbjct: 195 QLAEGMLRNPTQIEVAARNTA 215
>gi|341877703|gb|EGT33638.1| hypothetical protein CAEBREN_21195 [Caenorhabditis brenneri]
Length = 578
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 92/146 (63%), Gaps = 6/146 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLP-DVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+I+SP+REL SQI V +PF L V++V GG +V ++K ++ + N+L+ TPG
Sbjct: 83 ALILSPSRELCSQIVSVIEPFAEKLKLTVETV--TGGQKVDKNIKTLKNKNINILVATPG 140
Query: 61 RLYDIMERMDVL---DFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQ 117
RL+ +++ L R +++LV+DEADR ++ F+ + I+S +PK RRTGLFSATQ
Sbjct: 141 RLFQLIQHEKTLIARKMRTVQLLVIDEADRFNEIQFEDHMREILSCIPKQRRTGLFSATQ 200
Query: 118 TEAVEELSKAGLRNPVRVEVRAESKS 143
+ ++L GLRN +V+V E S
Sbjct: 201 VKEEDDLMVFGLRNAKQVKVSQERNS 226
>gi|301093251|ref|XP_002997474.1| ATP-dependent RNA helicase, putative [Phytophthora infestans T30-4]
gi|262110730|gb|EEY68782.1| ATP-dependent RNA helicase, putative [Phytophthora infestans T30-4]
Length = 489
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 94/150 (62%), Gaps = 3/150 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++ISPTREL+ QIY V + +++ GG +A+ +++ + G N+LI TPGRL
Sbjct: 181 IVISPTRELALQIYGVVRDICKYHSQTHGIVM-GGANRRAEAERLVK-GVNILISTPGRL 238
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++ + NL+ILV+DEADR+L +GF++++ II +PK R+T LFSATQT+ VE
Sbjct: 239 LDHLQNTKAFIYHNLQILVIDEADRILSIGFEEEMRQIIKCIPKERQTMLFSATQTKKVE 298
Query: 123 ELSKAGLR-NPVRVEVRAESKSHHVSASSQ 151
+L++ ++ PV V V E V+ Q
Sbjct: 299 DLARLSIKEKPVYVGVEEEDTKATVATLEQ 328
>gi|399992337|ref|YP_006572577.1| ATP-dependent RNA helicase RhlE [Phaeobacter gallaeciensis DSM
17395 = CIP 105210]
gi|398656892|gb|AFO90858.1| putative ATP-dependent RNA helicase RhlE [Phaeobacter gallaeciensis
DSM 17395 = CIP 105210]
Length = 447
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 93/142 (65%), Gaps = 3/142 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G++++PTREL++QI + P +K+ L+VGGV + + ++ G ++LI TPGR
Sbjct: 83 GLVLAPTRELANQIAANLKGLTEGTP-IKTGLVVGGVSINPQISRLSR-GTDILIATPGR 140
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L DI++R LD + + LVLDEAD++LD+GF + I + LP+ R+T LFSAT + +
Sbjct: 141 LLDILDR-GALDLGSCDFLVLDEADQMLDLGFIHALRKIAALLPEQRQTMLFSATMPKQM 199
Query: 122 EELSKAGLRNPVRVEVRAESKS 143
E++ + L++PVR+EV K+
Sbjct: 200 NEIANSYLQSPVRIEVNPPGKA 221
>gi|302496482|ref|XP_003010242.1| hypothetical protein ARB_03497 [Arthroderma benhamiae CBS 112371]
gi|291173784|gb|EFE29602.1| hypothetical protein ARB_03497 [Arthroderma benhamiae CBS 112371]
Length = 542
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 95/145 (65%), Gaps = 4/145 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI+ VA+ + V+ +GG +A+ +K+ + G N+LIGTPGR
Sbjct: 165 ALIITPTRELALQIFGVARELMEHHSQTYGVV-IGGANRRAEAEKLNK-GVNVLIGTPGR 222
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKL-RRTGLFSATQTEA 120
L D + + F+NL+ LV+DEADR+L++GF+ ++ IIS LPK R+T LFSATQT
Sbjct: 223 LLDHLRSTEGFVFKNLKTLVIDEADRILEVGFEDELRQIISILPKEDRQTMLFSATQTTK 282
Query: 121 VEELSKAGLRNPVRVEVRAESKSHH 145
VE+L++ L+ P + + + K H
Sbjct: 283 VEDLARISLK-PGPLYINVDHKKEH 306
>gi|395762134|ref|ZP_10442803.1| DEAD/DEAH box helicase [Janthinobacterium lividum PAMC 25724]
Length = 425
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 95/141 (67%), Gaps = 3/141 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+ Q+Y + + LP ++S + GGV ++ + K+ + G ++L+ TPGRL
Sbjct: 90 LVLVPTRELAEQVYASFRSYGGNLP-LRSFVAYGGVPIEPQISKLRK-GLDVLVATPGRL 147
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++ + F ++ LVLDEADR+LD+GF++++ ++ +PK R+T LFSAT ++A+
Sbjct: 148 LD-LQTQGAVKFEQVQTLVLDEADRMLDLGFERELDILLMTMPKQRQTLLFSATFSDAIR 206
Query: 123 ELSKAGLRNPVRVEVRAESKS 143
++K L++P+ VEV A + +
Sbjct: 207 AMAKTMLKDPISVEVSARNST 227
>gi|400754009|ref|YP_006562377.1| ATP-dependent RNA helicase RhlE [Phaeobacter gallaeciensis 2.10]
gi|398653162|gb|AFO87132.1| putative ATP-dependent RNA helicase RhlE [Phaeobacter gallaeciensis
2.10]
Length = 458
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 93/142 (65%), Gaps = 3/142 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G++++PTREL++QI + P +K+ L+VGGV + + ++ G ++LI TPGR
Sbjct: 94 GLVLAPTRELANQIAANLKGLTEGTP-IKTGLVVGGVSINPQISRLSR-GTDILIATPGR 151
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L DI++R LD + + LVLDEAD++LD+GF + I + LP+ R+T LFSAT + +
Sbjct: 152 LLDILDR-GALDLGSCDFLVLDEADQMLDLGFIHALRKIAALLPEQRQTMLFSATMPKQM 210
Query: 122 EELSKAGLRNPVRVEVRAESKS 143
E++ + L++PVR+EV K+
Sbjct: 211 NEIANSYLQSPVRIEVNPPGKA 232
>gi|163750030|ref|ZP_02157274.1| ATP-dependent RNA helicase, DEAD box family protein [Shewanella
benthica KT99]
gi|161330304|gb|EDQ01285.1| ATP-dependent RNA helicase, DEAD box family protein [Shewanella
benthica KT99]
Length = 436
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 89/135 (65%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ Q++ + + L +KS L+ GGV + A + I G ++L+ TPGRL
Sbjct: 105 LVLTPTRELALQVHGSFVKY-AKLTQLKSALVYGGVSIDAQAQ-ILAAGVDILVATPGRL 162
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D + R + LE LV DEADR+LDMGF+ +I I+ +LPK R+T LFSAT E++
Sbjct: 163 LDHLRRGS-MSLSELEFLVFDEADRMLDMGFKDEIDAIVKQLPKTRQTLLFSATFDESLY 221
Query: 123 ELSKAGLRNPVRVEV 137
LS++ LR+P R+EV
Sbjct: 222 GLSQSLLRDPKRIEV 236
>gi|90417199|ref|ZP_01225126.1| putative ATP-dependent RNA helicase DbpA [gamma proteobacterium
HTCC2207]
gi|90330975|gb|EAS46236.1| putative ATP-dependent RNA helicase DbpA [marine gamma
proteobacterium HTCC2207]
Length = 466
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 98/156 (62%), Gaps = 2/156 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+ Q+ + + ++K + L GGV V +E GA++++GTPGR+
Sbjct: 80 LVLCPTRELADQVAAEIRKLARGIHNIKVLTLCGGVAFGPQVGSLEH-GAHIIVGTPGRV 138
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D + + + L+ NL L+LDEADR+LDMGFQ+ + I+ +P+ R+T LFSAT E ++
Sbjct: 139 EDHLRKAN-LNLDNLTTLILDEADRMLDMGFQQALDDIVGYMPRQRQTMLFSATYPEKID 197
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKT 158
++++ +R+PV VEV+ S + + Q+ + ++
Sbjct: 198 KIAQRIMRSPVTVEVQDSHSSQSIVETLYQIDNDQS 233
>gi|325094386|gb|EGC47696.1| ATP-dependent RNA helicase DBP4 [Ajellomyces capsulatus H88]
Length = 811
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 104/171 (60%), Gaps = 9/171 (5%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+++SPTREL+ QI+ V + I + L++GG ++ + +++ + N+L+ TPGR
Sbjct: 124 ALVLSPTRELAIQIFEVLRK-IGRHHTFSAGLVIGGKGLQEEQERLGK--MNILVCTPGR 180
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ M++ D ++++LVLDEADR++DMGFQ + II LPK R+T LFSATQT+ V
Sbjct: 181 MLQHMDQTAAFDTNHIQLLVLDEADRIMDMGFQSTVDAIIDHLPKERQTMLFSATQTKKV 240
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSK--TPLGLHLEVIWNV 170
+L++ LR+P V V + SA+ +L + TPL L+ +W+
Sbjct: 241 SDLARLSLRDPEYVSVHETA----ASATPAKLQQNYIITPLPEKLDTLWSF 287
>gi|167537882|ref|XP_001750608.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770904|gb|EDQ84581.1| predicted protein [Monosiga brevicollis MX1]
Length = 395
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 89/136 (65%), Gaps = 3/136 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTRELS Q Y V Q + P L++GG +A+ ++ + G N+L+ TPGRL
Sbjct: 25 IIISPTRELSLQTYGVVQDLLRYHPQTHG-LVMGGANRRAEADRLVK-GVNVLVATPGRL 82
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++ ++NL+ L++DEADR+L +GF++++ II LPK R+T LFSATQT VE
Sbjct: 83 LDHLQNTQGFLYKNLQCLIIDEADRILQVGFEEEMRQIIKLLPKKRQTLLFSATQTRKVE 142
Query: 123 ELSKAGLRN-PVRVEV 137
+L++ L+ P+ V V
Sbjct: 143 DLARISLKGEPLYVGV 158
>gi|225558597|gb|EEH06881.1| ATP-dependent RNA helicase DBP4 [Ajellomyces capsulatus G186AR]
Length = 810
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 104/170 (61%), Gaps = 9/170 (5%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++SPTREL+ QI+ V + I + L++GG ++ + +++ + N+L+ TPGR+
Sbjct: 125 LVLSPTRELAIQIFEVLRK-IGRHHTFSAGLVIGGKGLQEEQERLGK--MNILVCTPGRM 181
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M++ D ++++LVLDEADR++DMGFQ + II LPK R+T LFSATQT+ V
Sbjct: 182 LQHMDQTAAFDTNHIQLLVLDEADRIMDMGFQSTVDAIIDHLPKERQTMLFSATQTKKVS 241
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSK--TPLGLHLEVIWNV 170
+L++ LR+P V V + SA+ +L + TPL L+ +W+
Sbjct: 242 DLARLSLRDPEYVSVHETA----ASATPAKLQQNYIITPLPEKLDTLWSF 287
>gi|327306545|ref|XP_003237964.1| DEAD box ATP-dependent RNA helicase [Trichophyton rubrum CBS
118892]
gi|326460962|gb|EGD86415.1| DEAD box ATP-dependent RNA helicase [Trichophyton rubrum CBS
118892]
Length = 565
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 95/145 (65%), Gaps = 4/145 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI+ VA+ + V+ +GG +A+ +K+ + G N+LIGTPGR
Sbjct: 162 ALIITPTRELALQIFGVARELMEHHSQTYGVV-IGGANRRAEAEKLNK-GVNVLIGTPGR 219
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKL-RRTGLFSATQTEA 120
L D + + F+NL+ LV+DEADR+L++GF+ ++ IIS LPK R+T LFSATQT
Sbjct: 220 LLDHLRSTEGFVFKNLKTLVIDEADRILEVGFEDELRQIISILPKEDRQTMLFSATQTTK 279
Query: 121 VEELSKAGLRNPVRVEVRAESKSHH 145
VE+L++ L+ P + + + K H
Sbjct: 280 VEDLARISLK-PGPLYINVDHKKEH 303
>gi|333899033|ref|YP_004472906.1| DEAD/DEAH box helicase [Pseudomonas fulva 12-X]
gi|333114298|gb|AEF20812.1| DEAD/DEAH box helicase domain protein [Pseudomonas fulva 12-X]
Length = 442
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 90/136 (66%), Gaps = 3/136 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+++ PTREL+ Q+ Q + LP ++S + GGV + + K+ + G ++L+ TPGR
Sbjct: 77 ALVLVPTRELAEQVQQSVQTYSQFLP-LRSYAVYGGVSINPQMMKLRK-GLDVLVATPGR 134
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D+ R + F L++LVLDEADR+LD+GF +++ + + LPK R+T LFSAT ++A+
Sbjct: 135 LLDLY-RQSAVKFSQLQVLVLDEADRMLDLGFARELDELFAALPKKRQTLLFSATFSDAI 193
Query: 122 EELSKAGLRNPVRVEV 137
L+K LR+P+ +EV
Sbjct: 194 RGLAKEMLRDPLSIEV 209
>gi|326914387|ref|XP_003203507.1| PREDICTED: probable ATP-dependent RNA helicase DDX10-like, partial
[Meleagris gallopavo]
Length = 658
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+LI TPGRL
Sbjct: 149 LIISPTRELAFQTFKVLRK-VGKNHDFSAGLIIGGKDLKEESERIHH--INMLICTPGRL 205
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ +L++L+LDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 206 LQHMDETSYFYASDLQMLILDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 265
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L++P V V ++K
Sbjct: 266 DLARLSLKDPEYVWVHEKAK 285
>gi|383854020|ref|XP_003702520.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 2
[Megachile rotundata]
Length = 404
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 92/137 (67%), Gaps = 2/137 (1%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+I++PTREL+ QI + S++ VK ++VGG+++ + I + ++LI TPG
Sbjct: 88 FALILTPTRELAFQISEQFEALGSSI-GVKCAVIVGGMDMMSQAL-ILAKKPHILIATPG 145
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D +E + R+L+ LV+DEADR+L+M F+ ++ I+ +P+ RRT LFSAT T+
Sbjct: 146 RLIDHLENTKGFNLRSLKFLVMDEADRILNMDFEVEVDKILRVIPRERRTLLFSATMTKK 205
Query: 121 VEELSKAGLRNPVRVEV 137
V++L +A LRNPV+VEV
Sbjct: 206 VQKLQRASLRNPVKVEV 222
>gi|315047684|ref|XP_003173217.1| ATP-dependent RNA helicase has1 [Arthroderma gypseum CBS 118893]
gi|311343603|gb|EFR02806.1| ATP-dependent RNA helicase has1 [Arthroderma gypseum CBS 118893]
Length = 567
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 95/145 (65%), Gaps = 4/145 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI+ VA+ + V+ +GG +A+ +K+ + G N+LIGTPGR
Sbjct: 163 ALIITPTRELALQIFGVARELMEHHSQTYGVV-IGGANRRAEAEKLNK-GVNVLIGTPGR 220
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPK-LRRTGLFSATQTEA 120
L D + + F+NL+ LV+DEADR+L++GF+ ++ IIS LPK R+T LFSATQT
Sbjct: 221 LLDHLRSTEGFVFKNLKTLVIDEADRILEVGFEDELRQIISILPKDDRQTMLFSATQTTK 280
Query: 121 VEELSKAGLRNPVRVEVRAESKSHH 145
VE+L++ L+ P + + + K H
Sbjct: 281 VEDLARISLK-PGPLYINVDHKKEH 304
>gi|326478694|gb|EGE02704.1| ATP-dependent RNA helicase has1 [Trichophyton equinum CBS 127.97]
Length = 568
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 95/145 (65%), Gaps = 4/145 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI+ VA+ + V+ +GG +A+ +K+ + G N+LIGTPGR
Sbjct: 165 ALIITPTRELALQIFGVARELMEHHSQTYGVV-IGGANRRAEAEKLNK-GVNVLIGTPGR 222
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPK-LRRTGLFSATQTEA 120
L D + + F+NL+ LV+DEADR+L++GF+ ++ IIS LPK R+T LFSATQT
Sbjct: 223 LLDHLRSTEGFVFKNLKTLVIDEADRILEVGFEDELRQIISILPKDDRQTMLFSATQTTK 282
Query: 121 VEELSKAGLRNPVRVEVRAESKSHH 145
VE+L++ L+ P + + + K H
Sbjct: 283 VEDLARISLK-PGPLYINVDHKKEH 306
>gi|335043275|ref|ZP_08536302.1| superfamily II DNA and RNA helicase [Methylophaga
aminisulfidivorans MP]
gi|333789889|gb|EGL55771.1| superfamily II DNA and RNA helicase [Methylophaga
aminisulfidivorans MP]
Length = 460
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 91/141 (64%), Gaps = 2/141 (1%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+SPTREL+ QI + +P++K L GG + + +E G ++++GTPGR
Sbjct: 75 ALILSPTRELAEQITSELRKLARLMPNIKVTTLCGGKPIGPQIASLEH-GTHIVVGTPGR 133
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ D+ + + L L++LVLDEADR+LDMGF + I II + P+ R+T LFSAT + +
Sbjct: 134 VNDLHSK-NCLKLDQLKVLVLDEADRMLDMGFAEVIHRIIDQTPESRQTALFSATYPDTI 192
Query: 122 EELSKAGLRNPVRVEVRAESK 142
+++S++ ++PV V+V +E K
Sbjct: 193 QQMSESIQKSPVSVKVISEHK 213
>gi|293605139|ref|ZP_06687530.1| ATP-independent RNA helicase DbpA [Achromobacter piechaudii ATCC
43553]
gi|292816463|gb|EFF75553.1| ATP-independent RNA helicase DbpA [Achromobacter piechaudii ATCC
43553]
Length = 462
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 85/145 (58%), Gaps = 2/145 (1%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+++ PTREL+ Q+ + +P+VK + L GG + + + GA+L++GTPGR
Sbjct: 75 ALLVCPTRELADQVAQELRRLARLIPNVKILTLCGGAPARPQAESLAR-GAHLVVGTPGR 133
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ D +ER LD L LVLDEADR++DMGF I I S P R+T LFSAT + +
Sbjct: 134 IQDHLERGS-LDLSGLTTLVLDEADRMVDMGFYDDIVAIASHCPAKRQTLLFSATYPDNI 192
Query: 122 EELSKAGLRNPVRVEVRAESKSHHV 146
+LS LRNP V+V A+ + +
Sbjct: 193 RKLSARFLRNPAEVKVEAQHDASRI 217
>gi|302845521|ref|XP_002954299.1| hypothetical protein VOLCADRAFT_76220 [Volvox carteri f.
nagariensis]
gi|300260504|gb|EFJ44723.1| hypothetical protein VOLCADRAFT_76220 [Volvox carteri f.
nagariensis]
Length = 485
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/137 (43%), Positives = 89/137 (64%), Gaps = 3/137 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QIY VA+ +++ GG + + +K+ + G NLL+ TPGR
Sbjct: 58 AVIISPTRELALQIYGVARDLFKYHTQTHGIVM-GGANRRTEAEKLVK-GVNLLVSTPGR 115
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D ++ FRNL LV+DEADR+L++GF++++ II LPK R+T LFSATQT V
Sbjct: 116 LLDHLQNTRGFVFRNLACLVIDEADRILEIGFEEEMRQIIKILPKERQTMLFSATQTTKV 175
Query: 122 EELSKAGLRN-PVRVEV 137
E+L++ ++ P+ V V
Sbjct: 176 EDLARISFKHKPLYVGV 192
>gi|296804908|ref|XP_002843302.1| ATP-dependent RNA helicase has1 [Arthroderma otae CBS 113480]
gi|238845904|gb|EEQ35566.1| ATP-dependent RNA helicase has1 [Arthroderma otae CBS 113480]
Length = 578
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 95/145 (65%), Gaps = 4/145 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI+ VA+ + V+ +GG +A+ +K+ + G N+LIGTPGR
Sbjct: 173 ALIITPTRELALQIFGVARELMEHHSQTYGVV-IGGANRRAEAEKLNK-GVNVLIGTPGR 230
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPK-LRRTGLFSATQTEA 120
L D + + F+NL+ LV+DEADR+L++GF+ ++ IIS LPK R+T LFSATQT
Sbjct: 231 LLDHLRSTEGFVFKNLKTLVIDEADRILEVGFEDELRQIISILPKDDRQTMLFSATQTTK 290
Query: 121 VEELSKAGLRNPVRVEVRAESKSHH 145
VE+L++ L+ P + + + K H
Sbjct: 291 VEDLARISLK-PGPLYINVDHKKEH 314
>gi|146294196|ref|YP_001184620.1| DEAD/DEAH box helicase [Shewanella putrefaciens CN-32]
gi|145565886|gb|ABP76821.1| DEAD/DEAH box helicase domain protein [Shewanella putrefaciens
CN-32]
Length = 550
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 89/135 (65%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL++Q+ + + LP ++S ++ GGV + + K+ G ++L+ TPGRL
Sbjct: 88 LVLTPTRELAAQVAESVETYGKYLP-LRSAVVFGGVPINPQIAKLRH-GVDVLVATPGRL 145
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + V F LEILVLDEADR+LDMGF + I I++ LPK R+ +FSAT ++ +
Sbjct: 146 MDLYNQKAV-KFNQLEILVLDEADRMLDMGFIRDIRKILAILPKQRQNLMFSATFSDEIR 204
Query: 123 ELSKAGLRNPVRVEV 137
EL+K + NPV + V
Sbjct: 205 ELAKGLVNNPVEISV 219
>gi|254565015|ref|XP_002489618.1| Putative ATP-dependent RNA helicase, nucleolar protein
[Komagataella pastoris GS115]
gi|238029414|emb|CAY67337.1| Putative ATP-dependent RNA helicase, nucleolar protein
[Komagataella pastoris GS115]
gi|328350040|emb|CCA36440.1| one of two almost identical potential DEAD box RNA helicase genes
similar to S. cerevisiae SPB4 (YFL002C) ATP-dependent
RNA helicase involved in the maturation of 25S ribosomal
RNA [Komagataella pastoris CBS 7435]
Length = 614
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 89/142 (62%), Gaps = 5/142 (3%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPD---VKSVLLVGGV-EVKADVKKIEEEGANLLI 56
+ MI+ PTREL+SQ+ + PD + + LLVG V V+ DV + +LI
Sbjct: 86 LAMILLPTRELASQVQRNFDQLLKFQPDDNKITTQLLVGAVGSVREDVYSFLQNRPQILI 145
Query: 57 GTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
GT GR+ + + +V ++L++LVLDEADRLLD+GF + II +LP+ RRTGLFSAT
Sbjct: 146 GTVGRMLEFLGSSNVKP-KSLQVLVLDEADRLLDLGFSHDVLTIIEKLPRQRRTGLFSAT 204
Query: 117 QTEAVEELSKAGLRNPVRVEVR 138
+ A ++ K GL NPVR+ V+
Sbjct: 205 ISSAGSDIFKTGLANPVRIVVK 226
>gi|346973381|gb|EGY16833.1| ATP-dependent RNA helicase DBP4 [Verticillium dahliae VdLs.17]
Length = 757
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL++QI+ V + + + L++GG +K + +++ + N+L+ TPGR
Sbjct: 124 ALIISPTRELAAQIFEVLRK-VGRYHAFSAGLVIGGKSLKEEAERLAK--MNILVCTPGR 180
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ +++ D NL++LVLDEADR++DMGFQ+ + ++ LP R+T LFSATQ++ +
Sbjct: 181 MLQHLDQTAGFDVDNLQMLVLDEADRIMDMGFQQAVDALVEHLPATRQTLLFSATQSKKI 240
Query: 122 EELSKAGLRNPVRVEVRAES 141
+L++ LR+P V V E+
Sbjct: 241 SDLARLSLRDPAYVAVHEEA 260
>gi|168009544|ref|XP_001757465.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691159|gb|EDQ77522.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 452
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 89/140 (63%), Gaps = 2/140 (1%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
++SPTREL+ QI + S + +K +LVGG+++ A + + ++++GTPG
Sbjct: 89 FACVLSPTRELAIQIAEQFEALGSGI-GLKCAVLVGGIDMMAQSVALAKR-PHVVVGTPG 146
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D + R ++ LVLDEADRLL+M F+++I I+ +PK RRT LFSAT T
Sbjct: 147 RLVDHLTNTKGFSLRTIKYLVLDEADRLLNMDFEQEIDEILKVIPKERRTYLFSATMTTK 206
Query: 121 VEELSKAGLRNPVRVEVRAE 140
V +L +A L+NPV+VEV A+
Sbjct: 207 VAKLQRACLKNPVKVEVSAK 226
>gi|242803584|ref|XP_002484204.1| DEAD box RNA helicase (Hca4), putative [Talaromyces stipitatus
ATCC 10500]
gi|218717549|gb|EED16970.1| DEAD box RNA helicase (Hca4), putative [Talaromyces stipitatus ATCC
10500]
Length = 817
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 104/168 (61%), Gaps = 5/168 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+++SPTREL+ QI+ V + + + L++GG +K + +++ N+L+ TPGR
Sbjct: 124 AIVLSPTRELAIQIFEVLRK-VGRYHTFSAGLVIGGKSLKEEQERLGR--MNILVCTPGR 180
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ +++ LD NL++LVLDEADR++DMGFQ+ + II LPK R+T LFSATQT+ V
Sbjct: 181 MLQHLDQTAELDVYNLQMLVLDEADRIMDMGFQQTVDAIIEHLPKTRQTMLFSATQTKKV 240
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWN 169
+L++ L++P V V + S + S+ Q TPL L+ +++
Sbjct: 241 SDLARLSLQDPEYVAVHETAAS--ATPSTLQQHYIITPLPEKLDTLYS 286
>gi|87199313|ref|YP_496570.1| DEAD/DEAH box helicase-like protein [Novosphingobium
aromaticivorans DSM 12444]
gi|87134994|gb|ABD25736.1| DEAD/DEAH box helicase-like protein [Novosphingobium
aromaticivorans DSM 12444]
Length = 464
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 87/135 (64%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+ PTREL++Q+ + + D+K LL+GGV++ VK ++E G ++LI TPGRL
Sbjct: 76 LILEPTRELAAQVAENFEKYGKNH-DLKMALLIGGVQMGDQVKALQE-GVDVLIATPGRL 133
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ ER +L E+LV+DEADR+LDMGF I I S+LP R+T LFSAT ++
Sbjct: 134 MDLFERGKIL-LTGCEMLVIDEADRMLDMGFIPDIENICSKLPTTRQTLLFSATMPPPIK 192
Query: 123 ELSKAGLRNPVRVEV 137
+L+ L NP +EV
Sbjct: 193 KLADKFLSNPKSIEV 207
>gi|120597666|ref|YP_962240.1| DEAD/DEAH box helicase [Shewanella sp. W3-18-1]
gi|120557759|gb|ABM23686.1| DEAD/DEAH box helicase domain protein [Shewanella sp. W3-18-1]
Length = 550
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 89/135 (65%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL++Q+ + + LP ++S ++ GGV + + K+ G ++L+ TPGRL
Sbjct: 88 LVLTPTRELAAQVAESVETYGKYLP-LRSAVVFGGVPINPQIAKLRH-GVDVLVATPGRL 145
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + V F LEILVLDEADR+LDMGF + I I++ LPK R+ +FSAT ++ +
Sbjct: 146 MDLYNQKAV-KFNQLEILVLDEADRMLDMGFIRDIRKILAILPKQRQNLMFSATFSDEIR 204
Query: 123 ELSKAGLRNPVRVEV 137
EL+K + NPV + V
Sbjct: 205 ELAKGLVNNPVEISV 219
>gi|367007158|ref|XP_003688309.1| hypothetical protein TPHA_0N00940 [Tetrapisispora phaffii CBS 4417]
gi|357526617|emb|CCE65875.1| hypothetical protein TPHA_0N00940 [Tetrapisispora phaffii CBS 4417]
Length = 771
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 86/130 (66%), Gaps = 3/130 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ Q Y V I T + L++GG +VK + +I + N+LIGTPGR
Sbjct: 116 ALIISPTRELAMQTYEVLTK-IGTHTSFSAGLVIGGKDVKFESARISK--INILIGTPGR 172
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ M++ L NL++LVLDEADR LDMGFQK + I+S LP R+T LFSATQ++++
Sbjct: 173 ILQHMDQAVGLSTSNLQMLVLDEADRCLDMGFQKTLDAIVSNLPPTRQTLLFSATQSQSL 232
Query: 122 EELSKAGLRN 131
+L++ L +
Sbjct: 233 TDLARLSLTD 242
>gi|255718187|ref|XP_002555374.1| KLTH0G07766p [Lachancea thermotolerans]
gi|238936758|emb|CAR24937.1| KLTH0G07766p [Lachancea thermotolerans CBS 6340]
Length = 764
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 97/154 (62%), Gaps = 6/154 (3%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ Q Y V I + L++GG EVK ++ +I + N+L+GTPGR
Sbjct: 116 ALIISPTRELAMQTYEVLTK-IGRYTSFSAGLVIGGKEVKFELDRISK--INILVGTPGR 172
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ M++ L+ NL++LVLDEADR LDMGF+K + I+ LP +R+T LFSATQ++++
Sbjct: 173 ILQHMDQAVGLNTSNLQVLVLDEADRCLDMGFKKTLDAIVMNLPPVRQTLLFSATQSQSL 232
Query: 122 EELSKAGLRNPVRV---EVRAESKSHHVSASSQQ 152
+L++ L + V EV+ +S S + QQ
Sbjct: 233 ADLARLSLTDYKSVGTAEVKDDSNSSATPDTLQQ 266
>gi|66911756|gb|AAH97636.1| Ddx10 protein [Xenopus laevis]
Length = 717
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 89/140 (63%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + + + L++GG ++K + I N+LI TPGRL
Sbjct: 150 LIISPTRELAYQTFEVLRK-VGRNHEFSAGLVIGGKDLKQETACIHR--TNILICTPGRL 206
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL +LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 207 LQHMDETSFFHASNLHMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 266
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L++P V V ++K
Sbjct: 267 DLARLSLKDPAYVWVHEKAK 286
>gi|326470514|gb|EGD94523.1| ATP-dependent RNA helicase HAS1 [Trichophyton tonsurans CBS 112818]
Length = 568
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 95/145 (65%), Gaps = 4/145 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI+ VA+ + V+ +GG +A+ +K+ + G N+LIGTPGR
Sbjct: 165 ALIITPTRELALQIFGVARELMEHHSQTYGVV-IGGANRRAEAEKLNK-GVNVLIGTPGR 222
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPK-LRRTGLFSATQTEA 120
L D + + F+NL+ LV+DEADR+L++GF+ ++ IIS LPK R+T LFSATQT
Sbjct: 223 LLDHLRSTEGFVFKNLKTLVIDEADRILEVGFEDELRQIISILPKDDRQTMLFSATQTTK 282
Query: 121 VEELSKAGLRNPVRVEVRAESKSHH 145
VE+L++ L+ P + + + K H
Sbjct: 283 VEDLARISLK-PGPLYINVDHKKEH 306
>gi|149631935|ref|XP_001509692.1| PREDICTED: probable ATP-dependent RNA helicase DDX10
[Ornithorhynchus anatinus]
Length = 859
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 93/140 (66%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + + + L++GG ++K + ++I + N+LI TPGRL
Sbjct: 142 LIISPTRELAYQTFEVLRK-VGKNHEFSAGLIIGGKDLKQESERINQ--INILICTPGRL 198
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL++LVLDEADR+LDMGF ++ II LP+ R+T LFSATQT++V+
Sbjct: 199 LQHMDETTYFHASNLQMLVLDEADRILDMGFADTMNAIIENLPRKRQTLLFSATQTKSVK 258
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L++P V V ++K
Sbjct: 259 DLARLSLKDPEYVWVHEKAK 278
>gi|212539820|ref|XP_002150065.1| DEAD box RNA helicase (Hca4), putative [Talaromyces marneffei ATCC
18224]
gi|210067364|gb|EEA21456.1| DEAD box RNA helicase (Hca4), putative [Talaromyces marneffei ATCC
18224]
Length = 819
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 104/168 (61%), Gaps = 5/168 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+++SPTREL+ QI+ V + + + L++GG +K + +++ N+L+ TPGR
Sbjct: 124 AIVLSPTRELAIQIFEVLRK-VGRYHTFSAGLVIGGKSLKEEQERLGR--MNILVCTPGR 180
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ +++ LD NL++LVLDEADR++DMGFQK + I+ LPK R+T LFSATQT+ V
Sbjct: 181 MLQHLDQTAELDVYNLQMLVLDEADRIMDMGFQKTVDAIVEHLPKTRQTLLFSATQTKKV 240
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWN 169
+L++ L++P V V + S + S+ Q TPL L+ +++
Sbjct: 241 SDLARLSLQDPEYVAVHEAAAS--ATPSTLQQHYIITPLPEKLDTLFS 286
>gi|336365891|gb|EGN94240.1| hypothetical protein SERLA73DRAFT_163228 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378572|gb|EGO19730.1| hypothetical protein SERLADRAFT_364022 [Serpula lacrymans var.
lacrymans S7.9]
Length = 561
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 102/151 (67%), Gaps = 4/151 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+SPTREL+ QI+ VA+ ++ ++ +GG ++A+ +K+ + G NLL+ TPGRL
Sbjct: 98 IIVSPTRELALQIFGVAKDLMAHHSQTFGIV-IGGANIRAEREKLVK-GVNLLVATPGRL 155
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPK-LRRTGLFSATQTEAV 121
D ++ FRNL+ LV+DEADR+L++GF++++ I++ LP R++ LFSATQT V
Sbjct: 156 LDHLQNTPGFVFRNLKALVIDEADRILEIGFEEEMKKIMTILPNDNRQSMLFSATQTTKV 215
Query: 122 EELSKAGLR-NPVRVEVRAESKSHHVSASSQ 151
++L++ LR P+ ++V E ++ VS SQ
Sbjct: 216 QDLARISLRPGPLHIDVDKEEETSTVSTLSQ 246
>gi|319796562|ref|YP_004158202.1| dead/deah box helicase domain-containing protein [Variovorax
paradoxus EPS]
gi|315599025|gb|ADU40091.1| DEAD/DEAH box helicase domain protein [Variovorax paradoxus EPS]
Length = 483
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 95/155 (61%), Gaps = 2/155 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
M++ PTREL+ Q+ + ++K V L GGV ++ + +E GA++++GTPGR+
Sbjct: 91 MVLCPTRELADQVTTEIRRLARAEENIKVVTLCGGVALRGQIASLEH-GAHIVVGTPGRI 149
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D +ER + LD L LVLDEADR+LDMGF + I + + PK R+T LFSAT E +
Sbjct: 150 MDHLERGN-LDLSALNTLVLDEADRMLDMGFFEDIVKVARQCPKERQTLLFSATYPEGIA 208
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSK 157
+L++ +++P ++ V+A+ + + Q+ S+
Sbjct: 209 KLAQQFMKSPQQITVQAQHEGSKIRQRWYQVKDSE 243
>gi|254476796|ref|ZP_05090182.1| ATP-dependent RNA helicase RhlE [Ruegeria sp. R11]
gi|214031039|gb|EEB71874.1| ATP-dependent RNA helicase RhlE [Ruegeria sp. R11]
Length = 447
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 91/142 (64%), Gaps = 3/142 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G++++PTREL++QI + P +K+ L+VGGV + + ++ G ++LI TPGR
Sbjct: 78 GLVLAPTRELANQIAATLKGLTEGTP-LKTGLVVGGVSINPQISRLSR-GTDILIATPGR 135
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L DI++R LD + + LVLDEAD++LD+GF + I S LP+ R+T LFSAT + +
Sbjct: 136 LLDILDR-GALDLGSCDFLVLDEADQMLDLGFIHALRKISSLLPQERQTMLFSATMPKQM 194
Query: 122 EELSKAGLRNPVRVEVRAESKS 143
E++ + L PVR+EV K+
Sbjct: 195 NEIANSYLNAPVRIEVSPPGKA 216
>gi|295667643|ref|XP_002794371.1| ATP-dependent RNA helicase DBP4 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226286477|gb|EEH42043.1| ATP-dependent RNA helicase DBP4 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 816
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 101/173 (58%), Gaps = 15/173 (8%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+++SPTREL+ QI+ V + I + L++GG ++ + +++ N+L+ TPGR
Sbjct: 124 ALVLSPTRELAIQIFEVLRK-IGRHHSFSAGLVIGGKSLQEEQERLGR--MNILVCTPGR 180
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ M++ D +++LVLDEADR++DMGFQ + I+ LPK R+T LFSATQT+ V
Sbjct: 181 MLQHMDQTAAFDTNRIQLLVLDEADRIMDMGFQNTVDAIVEHLPKERQTMLFSATQTQKV 240
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSK-----TPLGLHLEVIWN 169
+L++ LR+P + V H +ASS A TPL L+ +W+
Sbjct: 241 SDLARLSLRDPEYISV-------HEAASSATPAKLHQNYIVTPLPEKLDTLWS 286
>gi|303283774|ref|XP_003061178.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457529|gb|EEH54828.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 456
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 96/152 (63%), Gaps = 4/152 (2%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+++SPTREL+ QI + + + VK +LVGGV++ A ++ + ++++GTPG
Sbjct: 85 FALVLSPTRELAIQISEQFEALGAGI-GVKCAVLVGGVDMMAQSIQLGKR-PHVVVGTPG 142
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
R+ D + + L++L LDEADRLL++ F+++I I+ +P+ RRT LFSAT T
Sbjct: 143 RVVDHLTNTKGFGLKQLQVLCLDEADRLLNLDFEQEIDQILKVIPRDRRTQLFSATMTSK 202
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQ 152
V +L +A LRNPV+VEV A K V++ QQ
Sbjct: 203 VAKLQRACLRNPVKVEVSA--KYSTVASLKQQ 232
>gi|310796577|gb|EFQ32038.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 808
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 91/140 (65%), Gaps = 3/140 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL++QI+ V + + + L++GG +K + +++ + N+L+ TPGR
Sbjct: 128 ALIISPTRELAAQIFEVLRK-VGRNHSFSAGLVIGGKSLKEEAERLSK--MNILVCTPGR 184
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ +++ D NL+ILVLDEADR++DMGFQ + ++ LP R+T LFSATQ++ +
Sbjct: 185 MLQHLDQTAGFDVDNLQILVLDEADRIMDMGFQSAVDALVEHLPATRQTLLFSATQSKKI 244
Query: 122 EELSKAGLRNPVRVEVRAES 141
+L++ LR+P V V ES
Sbjct: 245 SDLARLSLRDPEYVSVHEES 264
>gi|108760847|ref|YP_634735.1| ATP-dependent RNA helicase DbpA [Myxococcus xanthus DK 1622]
gi|108464727|gb|ABF89912.1| ATP-independent RNA helicase DbpA [Myxococcus xanthus DK 1622]
Length = 461
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 92/144 (63%), Gaps = 2/144 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL +Q+ + LP ++ ++L GG ++ ++ +E+ GA+L +GTPGR+
Sbjct: 73 LVLCPTRELCAQVAGEIRRLGRRLPGLQVLVLAGGQPIRPQLEALEK-GAHLAVGTPGRV 131
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+++R + L+ R L +VLDEADR+LDMGF++ + I+ +P R+T LFSAT +E
Sbjct: 132 MDVLDR-EALETRQLSTVVLDEADRMLDMGFREDMERILGAMPPRRQTVLFSATFPPDIE 190
Query: 123 ELSKAGLRNPVRVEVRAESKSHHV 146
LS+ R PVRV V A + +
Sbjct: 191 ALSRDFQRQPVRVTVEAATAGPDI 214
>gi|424777568|ref|ZP_18204529.1| ATP-dependent RNA helicase DbpA [Alcaligenes sp. HPC1271]
gi|422887351|gb|EKU29755.1| ATP-dependent RNA helicase DbpA [Alcaligenes sp. HPC1271]
Length = 466
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 85/138 (61%), Gaps = 2/138 (1%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++I PTREL+ Q+ + +P+V+ + L GGV + + + GA++++GTPGR
Sbjct: 79 ALVICPTRELADQVTTELRRLARQIPNVRMLTLCGGVPSRPQTEALRN-GAHVVVGTPGR 137
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ D +ER + LD L+ LVLDEADR++DMGF I I S P R+T LFSAT E +
Sbjct: 138 IQDHLERGN-LDLSALKTLVLDEADRMVDMGFHDDIVAIASHCPPRRQTLLFSATYPENI 196
Query: 122 EELSKAGLRNPVRVEVRA 139
+LS L+NP V+V A
Sbjct: 197 RKLSARFLKNPAEVKVEA 214
>gi|226940616|ref|YP_002795690.1| ATP-dependent RNA helicase protein [Laribacter hongkongensis HLHK9]
gi|226715543|gb|ACO74681.1| Putative ATP-dependent RNA helicase protein [Laribacter
hongkongensis HLHK9]
Length = 520
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 85/142 (59%), Gaps = 2/142 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL Q+ AQ F + +P V ++GG + + + +++ TPGRL
Sbjct: 80 LVLAPTRELVQQVAKAAQEFSTKIPRVNVASVIGGTSFRTQNQMLTRP-IEVMVATPGRL 138
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D M R +DF LE+LVLDEADR+LDMGF + + I S+LPK R+T F+AT T V
Sbjct: 139 MDQM-RSGRIDFSRLEMLVLDEADRMLDMGFSEDVMEIASQLPKARQTAFFTATMTRRVL 197
Query: 123 ELSKAGLRNPVRVEVRAESKSH 144
+ + L P ++E+ A++ H
Sbjct: 198 DFADELLTEPAKIEIAAQTAKH 219
>gi|223998424|ref|XP_002288885.1| atp-dependent RNA helicase [Thalassiosira pseudonana CCMP1335]
gi|220975993|gb|EED94321.1| atp-dependent RNA helicase [Thalassiosira pseudonana CCMP1335]
Length = 518
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 92/142 (64%), Gaps = 4/142 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSV-LLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++ISPTREL+ QIY V + ++ ++ L++GG + + +++ + G N++I TPGR
Sbjct: 96 IVISPTRELAMQIYGVCKDLCTSGKHHQTYGLIIGGANRRTEAERLAK-GVNIVIATPGR 154
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D ++ FRNL V+DEADR+L+ GF+ + II LPK R+T LFSATQT+ V
Sbjct: 155 LLDHLQNTKGFVFRNLLAFVMDEADRILEQGFEDDLRSIIKALPKQRQTMLFSATQTKKV 214
Query: 122 EELSKAGL--RNPVRVEVRAES 141
E+L++ + ++ V VEV E+
Sbjct: 215 EDLARTAIDPKSAVYVEVPNET 236
>gi|197337698|ref|YP_002157744.1| putative ATP-dependent RNA helicase RhlE [Vibrio fischeri MJ11]
gi|197314950|gb|ACH64399.1| putative ATP-dependent RNA helicase RhlE [Vibrio fischeri MJ11]
Length = 496
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 93/135 (68%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL++Q++ + + LP + S ++ GGV+V ++++ G ++L+ TPGRL
Sbjct: 77 LVLTPTRELAAQVHESVEKYSKNLP-LTSDVVFGGVKVNPQMQRLRR-GVDVLVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + + + F LEILVLDEADR+LDMGF I I+++LPK R+ LFSAT ++ +
Sbjct: 135 LDLANQ-NAIKFDQLEILVLDEADRMLDMGFIHDIKKILAKLPKNRQNLLFSATFSDEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
+L+K +++PV + V
Sbjct: 194 QLAKGLVKDPVEISV 208
>gi|146386711|pdb|2PL3|A Chain A, Human Dead-Box Rna Helicase Ddx10, Dead Domain In Complex
With Adp
Length = 236
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 91/139 (65%), Gaps = 3/139 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 101 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERIN--NINILVCTPGRL 157
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ +L++LVLDEADR+LDMGF ++ +I LPK R+T LFSATQT++V+
Sbjct: 158 LQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSATQTKSVK 217
Query: 123 ELSKAGLRNPVRVEVRAES 141
+L++ L+NP V V ++
Sbjct: 218 DLARLSLKNPEYVWVHEKA 236
>gi|119946353|ref|YP_944033.1| ATP-dependent RNA helicase DbpA [Psychromonas ingrahamii 37]
gi|119864957|gb|ABM04434.1| ATP-dependent RNA helicase DbpA [Psychromonas ingrahamii 37]
Length = 462
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 89/140 (63%), Gaps = 4/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+ PTREL+ Q+ + T+ ++K + L GGV + +E GA++++GTPGR+
Sbjct: 76 LILCPTRELADQVGKELRRLARTIHNIKVLTLCGGVPFGPQIGSLEH-GAHIIVGTPGRI 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D + R L +LE+LVLDEADR+LDMGFQ I II + PK R+T LFSAT E +
Sbjct: 135 EDHL-RKGTLRLDDLEVLVLDEADRMLDMGFQASIDAIIDQAPKKRQTLLFSATFPEKIN 193
Query: 123 ELSKAGLRNPVRVEVRAESK 142
++K + +P+ V+AESK
Sbjct: 194 NIAKRIMTDPIM--VKAESK 211
>gi|114046344|ref|YP_736894.1| DEAD/DEAH box helicase domain-containing protein [Shewanella sp.
MR-7]
gi|113887786|gb|ABI41837.1| DEAD/DEAH box helicase domain protein [Shewanella sp. MR-7]
Length = 549
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 92/135 (68%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL++Q+ + + LP ++S ++ GGV + ++K+ G ++L+ TPGRL
Sbjct: 77 LVLTPTRELAAQVSESVETYGKYLP-LRSAVVFGGVPINPQIQKLRH-GVDVLVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D++++ +V+ F LEILVLDEADR+LDMGF + I I++ LP R+ +FSAT ++ +
Sbjct: 135 LDLVQQ-NVVKFNQLEILVLDEADRMLDMGFIRDIKKILALLPAKRQNLMFSATFSDEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
EL+K + PV + V
Sbjct: 194 ELAKGLVNQPVEISV 208
>gi|402895161|ref|XP_003910702.1| PREDICTED: probable ATP-dependent RNA helicase DDX10, partial
[Papio anubis]
Length = 778
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 235 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERIN--NINILVCTPGRL 291
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ +L++LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 292 LQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 351
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L++P V V ++K
Sbjct: 352 DLARLSLKDPEYVWVHEKAK 371
>gi|388578863|gb|EIM19196.1| DEAD-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 627
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 97/175 (55%), Gaps = 17/175 (9%)
Query: 1 MGMIISPTRELS----SQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLI 56
+I++PTREL+ SQ+ + LP ++ D ++ E++G+ +L+
Sbjct: 85 FALIVAPTRELAIQTHSQLNDIITASPVDLPPPLLLVSDQDSTTTDDRRRFEQQGSQILV 144
Query: 57 GTPGRLYDIMERMDVLD--------FRNLEILVLDEADRLLDMGFQKQISYIISRLPKLR 108
GTPGR+ + + + + N E+LVLDEADRLLD+GF + I+S LPK R
Sbjct: 145 GTPGRVDEFIGGNKGVKGKGKGSGRYTNFEMLVLDEADRLLDLGFLPTLRSIVSHLPKQR 204
Query: 109 RTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLH 163
RTGLFSAT T+ V L GLRNP +V V+ SKS S ++ +TP GL+
Sbjct: 205 RTGLFSATMTDQVGNLVAIGLRNPAKVVVKVTSKS-----SKSEIEERRTPAGLN 254
>gi|50556322|ref|XP_505569.1| YALI0F18238p [Yarrowia lipolytica]
gi|74659661|sp|Q6C193.1|SPB4_YARLI RecName: Full=ATP-dependent rRNA helicase SPB4
gi|49651439|emb|CAG78378.1| YALI0F18238p [Yarrowia lipolytica CLIB122]
Length = 626
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 101/191 (52%), Gaps = 38/191 (19%)
Query: 3 MIISPTRELSSQIYHVAQPFIS------------------------TLPD-VKSVLLVGG 37
+++SPTREL+ Q Y V Q + T+P ++ L++GG
Sbjct: 82 VVVSPTRELARQTYEVLQSILEMGCPEADASDKITLEKKKKGKAAPTMPKKIRGQLIMGG 141
Query: 38 -VEVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQ 96
+ D+K + +++ TPGRL +++ R + + LVLDEADRLLD+GF +
Sbjct: 142 DLPSHMDLKNFLRDKPQIIVATPGRLLELL-RAPQIKTSAFDSLVLDEADRLLDLGFGRD 200
Query: 97 ISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASS 156
I+ II+ LPK RRTGLFSAT T+A++ L K GLRNPV++ V+ K
Sbjct: 201 ITSIINILPKQRRTGLFSATITDAIQNLVKIGLRNPVKIVVKVGGKKEQ----------- 249
Query: 157 KTPLGLHLEVI 167
KTPL L L +
Sbjct: 250 KTPLSLGLSYV 260
>gi|429852313|gb|ELA27456.1| ATP-dependent rRNA helicase rrp3 [Colletotrichum gloeosporioides
Nara gc5]
Length = 476
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 98/152 (64%), Gaps = 9/152 (5%)
Query: 1 MGMIISPTRELSSQIYHVAQPF--ISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGT 58
G++++PTREL++QI A F + +L +++ ++VGG+++ A + ++ ++++ T
Sbjct: 123 FGLVLAPTRELAAQI---AASFEALGSLVNLRVAVIVGGLDMVAQAIALGKK-PHIVVAT 178
Query: 59 PGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQT 118
PGRL D +E+ R+L+ LV+DEADRLLDM F I I+ +P+ RRT LFSAT +
Sbjct: 179 PGRLVDHLEKTKGFSLRSLKYLVMDEADRLLDMDFGPSIDKILKFIPRERRTFLFSATMS 238
Query: 119 EAVEELSKAGLRNPVRVEVRAESKSHHVSASS 150
+E L +A LR+PVR+ + S S H + S+
Sbjct: 239 SKIESLQRASLRDPVRISI---SSSSHQTVST 267
>gi|59713334|ref|YP_206109.1| RNA helicase [Vibrio fischeri ES114]
gi|59481582|gb|AAW87221.1| RNA helicase [Vibrio fischeri ES114]
Length = 500
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 93/135 (68%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL++Q++ + + LP + S ++ GGV+V ++++ G ++L+ TPGRL
Sbjct: 77 LVLTPTRELAAQVHESVEKYSKNLP-LTSDVVFGGVKVNPQMQRLRR-GVDVLVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + + + F LEILVLDEADR+LDMGF I I+++LPK R+ LFSAT ++ +
Sbjct: 135 LDLANQ-NAIKFDQLEILVLDEADRMLDMGFIHDIKKILAKLPKNRQNLLFSATFSDEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
+L+K +++PV + V
Sbjct: 194 QLAKGLVKDPVEISV 208
>gi|348690718|gb|EGZ30532.1| hypothetical protein PHYSODRAFT_477816 [Phytophthora sojae]
Length = 690
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 102/180 (56%), Gaps = 18/180 (10%)
Query: 1 MGMIISPTRELSSQIYHVA----QPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLI 56
M ++++PTREL +QI A QPF+ +P ++GG + KA+ ++ + G +LI
Sbjct: 187 MALVLAPTRELCTQIMETANKLIQPFVFLVPGA----IIGGEKKKAEKARLRK-GITILI 241
Query: 57 GTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIIS-----RLPKLRRTG 111
TPGRL D + ++ L+ LVLDEADRLLDMGF+KQI+ I+S + K R+
Sbjct: 242 ATPGRLADHLVNTQSFNYTQLQFLVLDEADRLLDMGFEKQITQILSILDGQKSAKKRQNI 301
Query: 112 LFSATQTEAVEELSKAGLRNPVRVEVRA----ESKSHHVSASSQQLASSKTPLGLHLEVI 167
L SAT V++L+K L NPV ++ A E + + A SQ+ S+ L H ++
Sbjct: 302 LVSATINSGVQQLAKMSLSNPVLIDADAVTSGEDAATEIKARSQEKFSTPHQLMQHFMLV 361
>gi|386314915|ref|YP_006011080.1| DEAD/DEAH box helicase [Shewanella putrefaciens 200]
gi|319427540|gb|ADV55614.1| DEAD/DEAH box helicase domain protein [Shewanella putrefaciens 200]
Length = 539
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 89/135 (65%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL++Q+ + + LP ++S ++ GGV + + K+ G ++L+ TPGRL
Sbjct: 77 LVLTPTRELAAQVAESVETYGKYLP-LRSAVVFGGVPINPQIAKLRH-GVDVLVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + V F LEILVLDEADR+LDMGF + I I++ LPK R+ +FSAT ++ +
Sbjct: 135 MDLYNQKAV-KFNQLEILVLDEADRMLDMGFIRDIRKILAILPKQRQNLMFSATFSDEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
EL+K + NPV + V
Sbjct: 194 ELAKGLVNNPVEISV 208
>gi|423687487|ref|ZP_17662290.1| ATP-dependent RNA helicase RhlE [Vibrio fischeri SR5]
gi|371493270|gb|EHN68873.1| ATP-dependent RNA helicase RhlE [Vibrio fischeri SR5]
Length = 500
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 93/135 (68%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL++Q++ + + LP + S ++ GGV+V ++++ G ++L+ TPGRL
Sbjct: 77 LVLTPTRELAAQVHESVEKYSKNLP-LTSDVVFGGVKVNPQMQRLRR-GVDVLVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + + + F LEILVLDEADR+LDMGF I I+++LPK R+ LFSAT ++ +
Sbjct: 135 LDLANQ-NAIKFDQLEILVLDEADRMLDMGFIHDIKKILAKLPKNRQNLLFSATFSDEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
+L+K +++PV + V
Sbjct: 194 QLAKGLVKDPVEISV 208
>gi|254491257|ref|ZP_05104438.1| DEAD/DEAH box helicase domain protein [Methylophaga thiooxidans
DMS010]
gi|224463770|gb|EEF80038.1| DEAD/DEAH box helicase domain protein [Methylophaga thiooxydans
DMS010]
Length = 442
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 91/136 (66%), Gaps = 3/136 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++++PTREL++Q+ Q + LP ++S ++ GGV++ + ++ GA++L+ TPGR
Sbjct: 76 ALVLTPTRELAAQVADSVQTYGKFLP-LRSTVVFGGVKINPQMMRLRR-GADILVATPGR 133
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D+ ++ + + F +LE+L+LDEADR+LDMGF I IIS LPK R+ +FSAT + +
Sbjct: 134 LLDLYQQ-NAVRFDHLEVLILDEADRMLDMGFIHDIRKIISFLPKKRQNLMFSATFSTDI 192
Query: 122 EELSKAGLRNPVRVEV 137
L+K + NP+ + V
Sbjct: 193 RSLAKTLVNNPIEISV 208
>gi|328870453|gb|EGG18827.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 897
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 86/136 (63%), Gaps = 3/136 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+SPTREL+ QI+ V + + L++GG V + KKI E N+LI TPGR
Sbjct: 205 AIILSPTRELAIQIFDVLRD-AGKYHSFSAGLIIGGKNVDNEKKKINE--MNILIATPGR 261
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + NL++L+LDEADR+LD GF K ++ I+ LP R+T LFSATQT++V
Sbjct: 262 LLQHMDETEGFRCNNLQMLILDEADRILDFGFTKTLNSIVQNLPSSRQTLLFSATQTKSV 321
Query: 122 EELSKAGLRNPVRVEV 137
++L++ LR P V V
Sbjct: 322 KDLARLSLREPEYVSV 337
>gi|120612881|ref|YP_972559.1| DEAD/DEAH box helicase [Acidovorax citrulli AAC00-1]
gi|120591345|gb|ABM34785.1| ATP-dependent RNA helicase DbpA [Acidovorax citrulli AAC00-1]
Length = 477
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 86/138 (62%), Gaps = 2/138 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+ Q+ + ++K V L GGV ++ +E GA++++GTPGR+
Sbjct: 89 LVLCPTRELADQVAAEIRRLARAQENIKVVTLCGGVPLRGQAASLEH-GAHVVVGTPGRV 147
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D +ER LD L VLDEADR+LDMGF + I+ + R P R+T LFSAT E +E
Sbjct: 148 MDHLER-GTLDLGALATFVLDEADRMLDMGFSEDIAQVARRCPDTRQTLLFSATYPEGIE 206
Query: 123 ELSKAGLRNPVRVEVRAE 140
+++ +++P R+ V+A+
Sbjct: 207 RIARQFMKDPQRIVVQAQ 224
>gi|407717120|ref|YP_006838400.1| DEAD/DEAH box helicase [Cycloclasticus sp. P1]
gi|407257456|gb|AFT67897.1| DEAD/DEAH box helicase domain-containing protein [Cycloclasticus
sp. P1]
Length = 420
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 94/167 (56%), Gaps = 7/167 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I++PTREL+ QI + A+ I D+K L GG + K IE+ G ++LIGTPGR
Sbjct: 85 ALILAPTRELAIQIANDAK-IIGKHTDIKVGLAYGGTDYDKQRKTIED-GVDILIGTPGR 142
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKL--RRTGLFSATQTE 119
D + V + RN E+LVLDEADR+ D+GF I Y++ RLPK R LFSAT +
Sbjct: 143 TIDFF-KQKVFNLRNTEVLVLDEADRMFDLGFINDIRYLLRRLPKPENRLNLLFSATLSF 201
Query: 120 AVEELSKAGLRNPVRVEVRAE--SKSHHVSASSQQLASSKTPLGLHL 164
V EL+ + NPV V V E + V + + K PL LHL
Sbjct: 202 KVTELAYEHMNNPVMVRVEPEQITAKQVVESVYYPADNEKIPLLLHL 248
>gi|339503881|ref|YP_004691301.1| ATP-dependent RNA helicase RhlE [Roseobacter litoralis Och 149]
gi|338757874|gb|AEI94338.1| putative ATP-dependent RNA helicase RhlE [Roseobacter litoralis Och
149]
Length = 433
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 92/143 (64%), Gaps = 5/143 (3%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G++++PTREL++QI + F VK ++VGG + +K++E G +LL+ TPGR
Sbjct: 78 GLVLAPTRELATQISVNLRSFAENT-KVKVAMVVGGQSINNQIKRLER-GVDLLVATPGR 135
Query: 62 LYDIMERMDV-LDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
L D+M+R V LD LVLDEAD++LDMGF + I S +PK R+T LFSAT +
Sbjct: 136 LLDLMDRRAVRLD--ETVFLVLDEADQMLDMGFIHDLRKIASVIPKERQTMLFSATMPKQ 193
Query: 121 VEELSKAGLRNPVRVEVRAESKS 143
+ EL+ + LR+P+RVEV K+
Sbjct: 194 MNELANSYLRSPIRVEVSPPGKA 216
>gi|89902341|ref|YP_524812.1| ATP-dependent RNA helicase DbpA [Rhodoferax ferrireducens T118]
gi|89347078|gb|ABD71281.1| DEAD/DEAH box helicase-like [Rhodoferax ferrireducens T118]
Length = 473
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 89/139 (64%), Gaps = 2/139 (1%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+++ PTREL+ Q+ + ++K V L GGV ++ +E+ GA++++GTPGR
Sbjct: 89 ALVLCPTRELADQVTIEIRRLARATDNIKVVTLCGGVALRGQRASLEQ-GAHIVVGTPGR 147
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ D + R + L+ L LVLDEADR+LDMGF ++ + + PK R+T LFSAT E +
Sbjct: 148 VMDHLAR-EYLNLEALNTLVLDEADRMLDMGFFDDMATVAKQCPKERQTLLFSATYPEGI 206
Query: 122 EELSKAGLRNPVRVEVRAE 140
E+L++ +R P+RV+V A+
Sbjct: 207 EKLAQQFMREPLRVQVAAQ 225
>gi|329898744|ref|ZP_08272452.1| ATP-dependent RNA helicase RhlE [gamma proteobacterium IMCC3088]
gi|328920765|gb|EGG28222.1| ATP-dependent RNA helicase RhlE [gamma proteobacterium IMCC3088]
Length = 412
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 95/144 (65%), Gaps = 3/144 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+II+PTREL++QI AQ + S +++ + GGV++ ++++++ G ++LI TPGRL
Sbjct: 76 LIITPTRELAAQIEASAQTY-SKYISCRTLAVFGGVKIGPQIRQLKQ-GVDVLIATPGRL 133
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ E+ +V D + +++LVLDEADR+LDMGF I I LP ++T +FSAT ++ +
Sbjct: 134 LDLSEQGEV-DLKMIDVLVLDEADRMLDMGFIPAIRRIQKLLPATKQTLMFSATYSDEIR 192
Query: 123 ELSKAGLRNPVRVEVRAESKSHHV 146
L++ LR PV V V ++ + H
Sbjct: 193 TLAQTYLRRPVEVSVTPKNAAAHT 216
>gi|302653108|ref|XP_003018385.1| hypothetical protein TRV_07579 [Trichophyton verrucosum HKI 0517]
gi|291182028|gb|EFE37740.1| hypothetical protein TRV_07579 [Trichophyton verrucosum HKI 0517]
Length = 948
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 95/145 (65%), Gaps = 4/145 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL+ QI+ VA+ + V+ +GG +A+ +K+ + G N+LIGTPGR
Sbjct: 230 ALIITPTRELALQIFGVARELMEHHSQTYGVV-IGGANRRAEAEKLNK-GVNVLIGTPGR 287
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKL-RRTGLFSATQTEA 120
L D + + F+NL+ LV+DEADR+L++GF+ ++ IIS LPK R+T LFSATQT
Sbjct: 288 LLDHLRSTEGFVFKNLKTLVIDEADRILEVGFEDELRQIISILPKEDRQTMLFSATQTTK 347
Query: 121 VEELSKAGLRNPVRVEVRAESKSHH 145
VE+L++ L+ P + + + K H
Sbjct: 348 VEDLARISLK-PGPLYINVDHKKEH 371
>gi|66272268|gb|AAH96386.1| ddx10 protein [Xenopus (Silurana) tropicalis]
Length = 700
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 89/140 (63%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + + + L++GG ++K + I N+LI TPGRL
Sbjct: 145 LIISPTRELAYQTFEVLRK-VGRNHEFSAGLVIGGKDLKQETACIHR--TNILICTPGRL 201
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL++LVLDEADR+LDMGF ++ I+ LPK R+T LFSATQT++V+
Sbjct: 202 LQHMDETSTFHASNLQMLVLDEADRILDMGFADTMNAIVENLPKKRQTLLFSATQTKSVK 261
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L++P V V +K
Sbjct: 262 DLARLSLKDPEYVWVHENAK 281
>gi|86138673|ref|ZP_01057246.1| putative ATP-dependent RNA helicase protein [Roseobacter sp.
MED193]
gi|85824733|gb|EAQ44935.1| putative ATP-dependent RNA helicase protein [Roseobacter sp.
MED193]
Length = 431
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 91/141 (64%), Gaps = 3/141 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G++++PTREL++QI + P +K L+VGGV + +++I G ++L+ TPGR
Sbjct: 72 GLVLAPTRELANQIAATLKALTEGTP-MKIGLVVGGVSINPQIQRISR-GTDILVATPGR 129
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L DI++R + LD + + LVLDEAD++LD+GF + I S LP+ R+T LFSAT + +
Sbjct: 130 LLDILDR-NALDLGSCDFLVLDEADQMLDLGFIHALRKISSLLPEERQTMLFSATMPKQM 188
Query: 122 EELSKAGLRNPVRVEVRAESK 142
E++ + L PVR+EV K
Sbjct: 189 NEIANSYLNRPVRIEVTPPGK 209
>gi|367053355|ref|XP_003657056.1| hypothetical protein THITE_2122420 [Thielavia terrestris NRRL 8126]
gi|347004321|gb|AEO70720.1| hypothetical protein THITE_2122420 [Thielavia terrestris NRRL 8126]
Length = 827
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 100/168 (59%), Gaps = 5/168 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ V + I + L++GG +K + +++ N+L+ TPGR
Sbjct: 128 ALIISPTRELAVQIFEVLRK-IGRNHYFSAGLVIGGKSLKEEAERLGR--MNILVCTPGR 184
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ +++ D NL+ILVLDEADR++DMGFQ + ++ LPK R+T LFSATQ++ V
Sbjct: 185 MLQHLDQTAGFDVNNLQILVLDEADRIMDMGFQSAVDALVEHLPKTRQTLLFSATQSKRV 244
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWN 169
+L++ L++P V V + + +A Q TPL L+ +W
Sbjct: 245 SDLARLSLKDPEYVSVHEAAPTATPAALQQSYIV--TPLAEKLDTLWG 290
>gi|302833407|ref|XP_002948267.1| hypothetical protein VOLCADRAFT_31305 [Volvox carteri f.
nagariensis]
gi|300266487|gb|EFJ50674.1| hypothetical protein VOLCADRAFT_31305 [Volvox carteri f.
nagariensis]
Length = 410
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 90/140 (64%), Gaps = 2/140 (1%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+I+SPTREL+ QI + S + VK +LVGG+++ A + + ++L+GTPG
Sbjct: 69 FALILSPTRELAIQIAEQVEALGSGI-GVKCAVLVGGIDMMAQAIALAKR-PHILVGTPG 126
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
R+ D + + + L+ LVLDEAD+LLDM F+++I I+ +P+ RRT LFSAT T
Sbjct: 127 RVVDHLSNTKGFNLKQLKHLVLDEADKLLDMDFEQEIDQILKVIPRDRRTQLFSATMTNK 186
Query: 121 VEELSKAGLRNPVRVEVRAE 140
V++L +A L PV+VEV A+
Sbjct: 187 VQKLQRACLVRPVKVEVAAK 206
>gi|255533359|ref|YP_003093731.1| DEAD/DEAH box helicase [Pedobacter heparinus DSM 2366]
gi|255346343|gb|ACU05669.1| DEAD/DEAH box helicase domain protein [Pedobacter heparinus DSM
2366]
Length = 437
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 88/136 (64%), Gaps = 3/136 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++++PTREL+ QI + + LP ++ +++ GGV KA + G ++L+ TPGR
Sbjct: 78 ALVLTPTRELAIQIEESFKAYGKNLP-IRHLVIFGGVGQKAQTDALHR-GVDILVATPGR 135
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D+M + ++ R++EI VLDEADR+LDMGF + +I++LP R+T FSAT + +
Sbjct: 136 LLDLMNQ-GFINLRDIEIFVLDEADRMLDMGFIHDVKKVIAKLPAKRQTLFFSATMPKEI 194
Query: 122 EELSKAGLRNPVRVEV 137
+ L+ L NPV+VEV
Sbjct: 195 QGLADTILTNPVKVEV 210
>gi|188534378|ref|YP_001908175.1| ATP-dependent RNA helicase RhlE [Erwinia tasmaniensis Et1/99]
gi|188029420|emb|CAO97297.1| Putative ATP-dependent RNA helicase [Erwinia tasmaniensis Et1/99]
Length = 468
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 96/146 (65%), Gaps = 4/146 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++QI Q + L D++S+++ GGV + + K+ G ++L+ TPGRL
Sbjct: 79 LILTPTRELAAQIGENVQDYSKYL-DMRSLVVFGGVSINPQMMKLRG-GVDVLVATPGRL 136
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D +E + LD +EILVLDEADR+LDMGF I ++++LP R+ LFSAT ++ ++
Sbjct: 137 LD-LEHQNALDLSQVEILVLDEADRMLDMGFIHDIRRVLAKLPAKRQNLLFSATFSDEIK 195
Query: 123 ELSKAGLRNPVRVEV-RAESKSHHVS 147
L++ L NP +VEV R + S V+
Sbjct: 196 TLAEKLLHNPEQVEVARRNTASEQVT 221
>gi|444909957|ref|ZP_21230145.1| ATP-dependent RNA helicase RhlE [Cystobacter fuscus DSM 2262]
gi|444719555|gb|ELW60347.1| ATP-dependent RNA helicase RhlE [Cystobacter fuscus DSM 2262]
Length = 424
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 87/137 (63%), Gaps = 3/137 (2%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+G++++PTREL QI + F V V+++GG ++ A +E L++ TPG
Sbjct: 72 LGLVLAPTRELVQQISETVR-FFGESRGVSHVVVIGGEDMGAQAGALERR-PTLVLATPG 129
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D++ + ++DF L LVLDEADR+LDMGFQ+Q+ I++ LP+ R+T LFSAT +
Sbjct: 130 RLVDLL-KSGLVDFSRLRTLVLDEADRMLDMGFQEQLERILAALPRRRQTLLFSATLSPD 188
Query: 121 VEELSKAGLRNPVRVEV 137
V + A L PVRVEV
Sbjct: 189 VSAFASAELHRPVRVEV 205
>gi|242022035|ref|XP_002431447.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212516735|gb|EEB18709.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 636
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/137 (43%), Positives = 88/137 (64%), Gaps = 3/137 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTRELS Q + V + + L++GG KA+ +K+ + G N+L+ TPGR
Sbjct: 218 AIIISPTRELSMQTFGVLKELMKYHYHTYG-LVIGGANRKAEAEKLSK-GINILVATPGR 275
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D ++ F+NL+ LV+DEADR+LD+GF++++ II+ LPK R+T LFSAT T
Sbjct: 276 LLDHLQNTPGFLFKNLQCLVIDEADRILDIGFEEELKQIINLLPKRRQTMLFSATTTAKT 335
Query: 122 EELSKAGLRN-PVRVEV 137
E L+K L+ PV V +
Sbjct: 336 ENLTKLALKKEPVYVGI 352
>gi|237793963|ref|YP_002861515.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum Ba4 str.
657]
gi|229261675|gb|ACQ52708.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum Ba4 str.
657]
Length = 425
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 88/136 (64%), Gaps = 3/136 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++++PTREL+ QI + + + ++KSV++ GGV K + EG ++LI TPGR
Sbjct: 78 ALVLAPTRELAIQIAESFECYGKYI-NLKSVVIFGGVSQNPQTK-VLREGVDILIATPGR 135
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ D+ + +D RN+E VLDEADR+LDMG + IIS+LPK+R+ LFSAT +
Sbjct: 136 MLDLFNQ-KYIDLRNIEFFVLDEADRMLDMGMIHDVKKIISKLPKIRQNLLFSATMPSEI 194
Query: 122 EELSKAGLRNPVRVEV 137
+L + +++P+RVEV
Sbjct: 195 TKLVDSIVKDPIRVEV 210
>gi|336310213|ref|ZP_08565185.1| ATP-dependent RNA helicase RhlE [Shewanella sp. HN-41]
gi|335865943|gb|EGM70934.1| ATP-dependent RNA helicase RhlE [Shewanella sp. HN-41]
Length = 470
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 89/135 (65%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL++Q+ + + LP ++S ++ GGV + + K+ G ++L+ TPGRL
Sbjct: 77 LVLTPTRELAAQVAESVETYGKYLP-LRSAVVFGGVPINPQIAKLRH-GVDVLVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + V F LEILVLDEADR+LDMGF + I I++ LPK R+ +FSAT ++ +
Sbjct: 135 MDLYNQKAV-KFNQLEILVLDEADRMLDMGFIRDIRKILAILPKQRQNLMFSATFSDEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
+L+K + NPV + V
Sbjct: 194 QLAKGLVNNPVEISV 208
>gi|452820979|gb|EME28015.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
Length = 460
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 94/151 (62%), Gaps = 3/151 (1%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL Q ++V S P V++ GG K +V+K+ + G +++ TPGR
Sbjct: 93 AVIIAPTRELVLQTHNVLSELCSHHPHSHCVVM-GGSNRKVEVEKLTK-GTTIIVATPGR 150
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D ++ F+NL++LV+DEADR LD+GF++++ I+ LPK R+T LFSATQT V
Sbjct: 151 LLDHLQNTRGFLFKNLQVLVIDEADRCLDIGFEEEMHEILRILPKDRQTLLFSATQTTRV 210
Query: 122 EELSKAGLRN-PVRVEVRAESKSHHVSASSQ 151
E+L K +N P+ V V + ++ VS Q
Sbjct: 211 EDLIKVSFKNKPIYVGVDDKRETATVSGLEQ 241
>gi|342319377|gb|EGU11326.1| ATP-dependent RNA helicase dbp-4 [Rhodotorula glutinis ATCC 204091]
Length = 822
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 92/137 (67%), Gaps = 3/137 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++ISPTREL+ QI+ V + I + + L++GG +K + +++ N+LI TPGR
Sbjct: 122 ALVISPTRELAVQIFEVLRK-IGHQHNFSAGLVIGGKNLKHEQERLSR--MNILIATPGR 178
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M++ D +L++LVLDEADR+LDMGF ++ I++ LPK R+T LFSATQT++V
Sbjct: 179 LLQHMDQTLGFDCDHLQLLVLDEADRILDMGFSATLNAIVANLPKSRQTLLFSATQTKSV 238
Query: 122 EELSKAGLRNPVRVEVR 138
++L++ L+ P V VR
Sbjct: 239 KDLARLSLKEPEYVAVR 255
>gi|334142403|ref|YP_004535611.1| DEAD/DEAH box helicase [Novosphingobium sp. PP1Y]
gi|359401233|ref|ZP_09194203.1| DEAD/DEAH box helicase-like protein [Novosphingobium
pentaromativorans US6-1]
gi|333940435|emb|CCA93793.1| DEAD/DEAH box helicase-like [Novosphingobium sp. PP1Y]
gi|357597304|gb|EHJ59052.1| DEAD/DEAH box helicase-like protein [Novosphingobium
pentaromativorans US6-1]
Length = 462
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 86/135 (63%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+ PTREL++Q+ + + D+K LL+GGV++ VK + E G ++LI TPGRL
Sbjct: 76 LILEPTRELAAQVAENFEKYGKNH-DLKMALLIGGVQMGDQVKALTE-GVDVLIATPGRL 133
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ ER +L E+LV+DEADR+LDMGF I I S+LP R+T LFSAT ++
Sbjct: 134 MDLFERGKIL-LTGCELLVIDEADRMLDMGFIPDIENICSKLPTNRQTMLFSATMPPPIK 192
Query: 123 ELSKAGLRNPVRVEV 137
+LS L NP +EV
Sbjct: 193 KLSDRFLSNPKYIEV 207
>gi|302306975|ref|NP_983443.2| ACR040Wp [Ashbya gossypii ATCC 10895]
gi|442570096|sp|Q75C76.2|DBP4_ASHGO RecName: Full=ATP-dependent RNA helicase DBP4
gi|299788776|gb|AAS51267.2| ACR040Wp [Ashbya gossypii ATCC 10895]
gi|374106649|gb|AEY95558.1| FACR040Wp [Ashbya gossypii FDAG1]
Length = 763
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 89/130 (68%), Gaps = 3/130 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++ISPTREL+ QIY V I + L++GG +VK +++++ + N+LIGTPGR
Sbjct: 116 ALVISPTRELAMQIYEVLVK-IGKYMSFSAGLVIGGKDVKFEMERVSK--INILIGTPGR 172
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M++ L+ NL+ILVLDEADR LDMGF+K + I+S LP R+T LFSATQ++++
Sbjct: 173 LLQHMDQSVGLNTSNLQILVLDEADRCLDMGFKKALDAIVSNLPPSRQTLLFSATQSQSL 232
Query: 122 EELSKAGLRN 131
+L++ L +
Sbjct: 233 ADLARLSLAD 242
>gi|159465205|ref|XP_001690813.1| predicted protein [Chlamydomonas reinhardtii]
gi|158279499|gb|EDP05259.1| predicted protein [Chlamydomonas reinhardtii]
Length = 446
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 88/137 (64%), Gaps = 2/137 (1%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+I+SPTREL+ QI + S + VKS +LVGG+++ A + + ++L+GTPG
Sbjct: 87 FALILSPTRELAIQIAEQVEALGSGI-GVKSCVLVGGIDMMAQAIALAKR-PHVLVGTPG 144
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
R+ D + + L+ LVLDEAD+LLDM F+++I I+ +P+ RRT LFSAT T
Sbjct: 145 RVVDHLSNTKGFSLKQLKHLVLDEADKLLDMDFEQEIDQILKVIPRERRTQLFSATMTNK 204
Query: 121 VEELSKAGLRNPVRVEV 137
V++L +A L PV++EV
Sbjct: 205 VQKLQRACLDKPVKIEV 221
>gi|89072882|ref|ZP_01159439.1| putative ATP-dependent RNA helicase RhlE [Photobacterium sp. SKA34]
gi|89051404|gb|EAR56859.1| putative ATP-dependent RNA helicase RhlE [Photobacterium sp. SKA34]
Length = 496
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 96/141 (68%), Gaps = 3/141 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL++Q+ + L + S ++ GGV+V + ++ + GA++L+ TPGRL
Sbjct: 77 LVLTPTRELAAQVGESVATYSKNL-RLSSAVVFGGVKVNPQMLRMRK-GADVLVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + + + FR++EILVLDEADR+LDMGF + I I++ LPK R+ LFSAT ++ +
Sbjct: 135 MDLHSQ-NAVKFRDVEILVLDEADRMLDMGFIRDIRKILALLPKERQNLLFSATFSDEIR 193
Query: 123 ELSKAGLRNPVRVEVRAESKS 143
EL+K + NPV ++V +++
Sbjct: 194 ELAKGLVSNPVEIDVNPRNQT 214
>gi|343514647|ref|ZP_08751716.1| DNA and RNA helicase [Vibrio sp. N418]
gi|342799724|gb|EGU35281.1| DNA and RNA helicase [Vibrio sp. N418]
Length = 521
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 91/135 (67%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++QI + L D+ S ++ GGV++ + ++ + G+++L+ TPGRL
Sbjct: 77 LILTPTRELAAQIQENVHNYSRYL-DLNSTVVFGGVKINPQMMQLRK-GSDILVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + V +F LE+LVLDEADR+LDMGF + IS I++ LPK R+ LFSAT + +
Sbjct: 135 LDLFNQKAV-NFSQLEVLVLDEADRMLDMGFFRDISKILNLLPKKRQNLLFSATFSPEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
+L+K + NPV + V
Sbjct: 194 DLAKGLVNNPVEISV 208
>gi|239818170|ref|YP_002947080.1| ATP-dependent RNA helicase DbpA [Variovorax paradoxus S110]
gi|239804747|gb|ACS21814.1| DEAD/DEAH box helicase domain protein [Variovorax paradoxus S110]
Length = 476
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 94/155 (60%), Gaps = 2/155 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
M++ PTREL+ Q+ + ++K V L GGV ++ + +E GA++++GTPGR+
Sbjct: 87 MVLCPTRELADQVTTEIRRLARAEENIKVVTLCGGVALRGQIASLEH-GAHIVVGTPGRI 145
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D +ER + L+ L LVLDEADR+LDMGF I + + PK R+T LFSAT E +
Sbjct: 146 MDHLEREN-LNLEALNTLVLDEADRMLDMGFFDDIVKVARQCPKERQTLLFSATYPEGIA 204
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSK 157
+L++ ++NP ++ V+A+ + + Q+ S+
Sbjct: 205 KLAQQFMKNPEQITVQAQHEGSKIRQRWYQVKESE 239
>gi|358373394|dbj|GAA89992.1| ATP-dependent RNA helicase [Aspergillus kawachii IFO 4308]
Length = 471
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 93/147 (63%), Gaps = 3/147 (2%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
G+I++PTREL+ QI + ++L V+S ++VGG+++ + + ++ ++++ TPG
Sbjct: 122 FGLILAPTRELAYQISKSFESLGASL-GVRSCVIVGGMDMVSQSISLGKK-PHIIVATPG 179
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D +E RNL+ LV+DEADRLLDM F + I+ LP+ RRT LFSAT +
Sbjct: 180 RLLDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPLLDKILKVLPRERRTFLFSATMSSK 239
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVS 147
VE L +A L NP+RV V + SK VS
Sbjct: 240 VESLQRASLSNPLRVSV-STSKYQTVS 265
>gi|390351278|ref|XP_786173.3| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Strongylocentrotus purpuratus]
Length = 428
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 94/143 (65%), Gaps = 2/143 (1%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
++++PTREL+ QI + ST+ V V++VGG+++ ++ ++ +++I TPG
Sbjct: 69 FALVLTPTRELAYQIAEQFEALGSTI-GVSCVVIVGGIDMMTQALQLAKK-PHVMIATPG 126
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D +E + R L+ LV+DEADR+L+M F+ +I I+ +PK RRT L+SAT T+
Sbjct: 127 RLVDHLENTKGFNLRGLKYLVMDEADRILNMDFEAEIDKILKVIPKQRRTYLYSATMTKK 186
Query: 121 VEELSKAGLRNPVRVEVRAESKS 143
V +L +A L++PV+VEV + ++
Sbjct: 187 VAKLQRASLQDPVKVEVSTKYQT 209
>gi|343512983|ref|ZP_08750095.1| DNA and RNA helicase [Vibrio scophthalmi LMG 19158]
gi|342793951|gb|EGU29734.1| DNA and RNA helicase [Vibrio scophthalmi LMG 19158]
Length = 521
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 91/135 (67%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++QI + L D+ S ++ GGV++ + ++ + G+++L+ TPGRL
Sbjct: 77 LILTPTRELAAQIQENVHNYSRYL-DLNSTVVFGGVKINPQMMQLRK-GSDILVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + V +F LE+LVLDEADR+LDMGF + IS I++ LPK R+ LFSAT + +
Sbjct: 135 LDLFNQKAV-NFSQLEVLVLDEADRMLDMGFFRDISKILNLLPKKRQNLLFSATFSPEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
+L+K + NPV + V
Sbjct: 194 DLAKGLVNNPVEISV 208
>gi|325265712|ref|ZP_08132401.1| ATP-dependent RNA helicase RhlE [Kingella denitrificans ATCC 33394]
gi|324982843|gb|EGC18466.1| ATP-dependent RNA helicase RhlE [Kingella denitrificans ATCC 33394]
Length = 449
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 90/145 (62%), Gaps = 2/145 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL++Q+ AQ + + V+SV LVGG +K + + ++++ TPGRL
Sbjct: 79 LVLTPTRELAAQVEKNAQIYAKNMKWVRSVTLVGGSSFGQQIKAMSKP-IDIIVATPGRL 137
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D M R +DF LE+L+LDEADR+LDMGF I I++ P+ R+T LFSAT AV
Sbjct: 138 MDHM-RSGRVDFDRLEVLILDEADRMLDMGFIDDIETIVAATPEDRQTLLFSATWDGAVG 196
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVS 147
+L++ +NP +E+ E K +
Sbjct: 197 KLARKLTKNPEVIEIEREDKQGKID 221
>gi|15239187|ref|NP_201391.1| DEAD-box ATP-dependent RNA helicase 27 [Arabidopsis thaliana]
gi|108861887|sp|Q9SB89.2|RH27_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 27
gi|2827700|emb|CAA16673.1| DEAD box ATP dependent helicase protein [Arabidopsis thaliana]
gi|9759574|dbj|BAB11137.1| ATP-dependent RNA helicase-like [Arabidopsis thaliana]
gi|16649121|gb|AAL24412.1| ATP-dependent RNA helicase-like [Arabidopsis thaliana]
gi|24899721|gb|AAN65075.1| ATP-dependent RNA helicase-like [Arabidopsis thaliana]
gi|332010738|gb|AED98121.1| DEAD-box ATP-dependent RNA helicase 27 [Arabidopsis thaliana]
Length = 633
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 88/135 (65%), Gaps = 2/135 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++I PTREL+ Q Y VA+ + ++V V G E + +I +G NLL+ TPGRL
Sbjct: 230 LVICPTRELAIQSYGVAKELLKY--HSQTVGKVIGGEKRKTEAEILAKGVNLLVATPGRL 287
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D +E + F+NL+ LV+DEADR+L+ F++ + I++ LPK R+T LFSATQ+ VE
Sbjct: 288 LDHLENTNGFIFKNLKFLVMDEADRILEQNFEEDLKKILNLLPKTRQTSLFSATQSAKVE 347
Query: 123 ELSKAGLRNPVRVEV 137
+L++ L +PV ++V
Sbjct: 348 DLARVSLTSPVYIDV 362
>gi|297796361|ref|XP_002866065.1| hypothetical protein ARALYDRAFT_495573 [Arabidopsis lyrata subsp.
lyrata]
gi|297311900|gb|EFH42324.1| hypothetical protein ARALYDRAFT_495573 [Arabidopsis lyrata subsp.
lyrata]
Length = 741
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 107/181 (59%), Gaps = 4/181 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL++Q + V + + LL+GG E DV+K N+L+ PGRL
Sbjct: 147 IIISPTRELAAQTFSVLNK-VGKFHKFSAGLLIGGRE-GVDVEKERVNEMNILVCAPGRL 204
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ + +L+IL+LDEADR+LD F+ Q+ IIS+LPK R+T LFSATQT+ V+
Sbjct: 205 LQHMDETPNFECSHLQILILDEADRVLDSAFKGQLDPIISQLPKHRQTLLFSATQTKKVK 264
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNHHNLLIC 182
+L++ LR+P + V E+ + ++ Q + P+ L+++W+ + + +L+
Sbjct: 265 DLARLSLRDPEYISVHEEAPTATPASLMQTVMI--VPVEKKLDMLWSFIKTHLNSRILVF 322
Query: 183 L 183
L
Sbjct: 323 L 323
>gi|58039465|ref|YP_191429.1| ATP-dependent RNA helicase [Gluconobacter oxydans 621H]
gi|58001879|gb|AAW60773.1| ATP-dependent RNA helicase [Gluconobacter oxydans 621H]
Length = 432
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 89/141 (63%), Gaps = 3/141 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL SQI + F P V+ + GGV VK +EE G ++++ PGRL
Sbjct: 84 LVLAPTRELVSQIADGFESFSRHQP-VRVTTIFGGVSQVHQVKALEE-GVDIIVAAPGRL 141
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D++E+ + D LE LVLDEAD++LDMGF K I I++ LP+ R T LFSAT +++
Sbjct: 142 LDLIEQ-GLCDLSQLETLVLDEADQMLDMGFAKPIERIVATLPEDRHTVLFSATMPKSIA 200
Query: 123 ELSKAGLRNPVRVEVRAESKS 143
L ++ LRNP +VE+ S +
Sbjct: 201 ALVESLLRNPAKVEIAPPSST 221
>gi|384945586|gb|AFI36398.1| putative ATP-dependent RNA helicase DDX10 [Macaca mulatta]
Length = 872
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 145 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERIN--NINILVCTPGRL 201
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ +L++LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 202 LQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 261
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L++P V V ++K
Sbjct: 262 DLARLSLKDPEYVWVHEKAK 281
>gi|209808966|ref|YP_002264504.1| putative ATP-dependent RNA helicase (DEAD/DEAH box helicase)
[Aliivibrio salmonicida LFI1238]
gi|208010528|emb|CAQ80896.1| putative ATP-dependent RNA helicase (DEAD/DEAH box helicase)
[Aliivibrio salmonicida LFI1238]
Length = 495
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 92/135 (68%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++Q++ + + LP + S ++ GGV+ ++++ + G ++L+ TPGRL
Sbjct: 77 LILTPTRELAAQVHESVEKYSVNLP-LTSDVVFGGVKANPQMQRLRK-GVDVLVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + + + F LEILVLDEADR+LDMGF I I+++LPK R+ LFSAT ++ +
Sbjct: 135 LDLANQ-NAIKFDQLEILVLDEADRMLDMGFIHDIKKILNKLPKNRQNLLFSATFSDEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
+L+K + NPV + V
Sbjct: 194 QLAKGLVNNPVEISV 208
>gi|148222920|ref|NP_001089088.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Xenopus laevis]
gi|114107928|gb|AAI23292.1| Ddx10 protein [Xenopus laevis]
Length = 663
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 89/140 (63%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + + + L++GG ++K + I N+LI TPGRL
Sbjct: 150 LIISPTRELAYQTFEVLRK-VGRNHEFSAGLVIGGKDLKQETACIHR--TNILICTPGRL 206
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL +LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 207 LQHMDETSFFHASNLHMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 266
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L++P V V ++K
Sbjct: 267 DLARLSLKDPEYVWVHEKAK 286
>gi|358254115|dbj|GAA54145.1| ATP-dependent RNA helicase DDX27 [Clonorchis sinensis]
Length = 586
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 85/134 (63%), Gaps = 1/134 (0%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++ISPTREL+ QI+ VA+ ++ P ++ L GG+++ + +L+I TPGR
Sbjct: 59 ALVISPTRELAVQIFRVAEKLVAYCPKIRIQLAAGGLDLHTQEASLRL-NPDLVIATPGR 117
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D + + + +E LVLDEAD+LLD F +QIS I+ + R+T LFSAT TE+V
Sbjct: 118 LIDHLSNAPNFNLQQIEYLVLDEADKLLDEYFVEQISEIVKHCGRQRQTLLFSATMTESV 177
Query: 122 EELSKAGLRNPVRV 135
+EL+ L+NPV+V
Sbjct: 178 KELATLSLKNPVQV 191
>gi|119331088|ref|NP_001073193.1| probable ATP-dependent RNA helicase DDX10 [Gallus gallus]
gi|82197778|sp|Q5ZJF6.1|DDX10_CHICK RecName: Full=Probable ATP-dependent RNA helicase DDX10; AltName:
Full=DEAD box protein 10
gi|53133616|emb|CAG32137.1| hypothetical protein RCJMB04_18j24 [Gallus gallus]
Length = 875
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+LI TPGRL
Sbjct: 149 LIISPTRELAFQTFKVLRK-VGKNHDFSAGLIIGGKDLKEESERIHH--INMLICTPGRL 205
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ +L++L+LDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 206 LQHMDETSYFYASDLQMLILDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 265
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L++P V V ++K
Sbjct: 266 DLARLSLKDPEYVWVHEKAK 285
>gi|343506044|ref|ZP_08743563.1| DNA and RNA helicase [Vibrio ichthyoenteri ATCC 700023]
gi|342804304|gb|EGU39623.1| DNA and RNA helicase [Vibrio ichthyoenteri ATCC 700023]
Length = 524
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 91/135 (67%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++QI + L D+ S ++ GGV++ + ++ + G+++L+ TPGRL
Sbjct: 77 LILTPTRELAAQIQENVHNYSRYL-DLNSTVVFGGVKINPQMMQLRK-GSDILVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + V +F LE+LVLDEADR+LDMGF + IS I++ LPK R+ LFSAT + +
Sbjct: 135 LDLFNQRAV-NFSQLEVLVLDEADRMLDMGFFRDISKILNLLPKKRQNLLFSATFSPEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
+L+K + NPV + V
Sbjct: 194 DLAKGLVNNPVEISV 208
>gi|385333348|ref|YP_005887299.1| DEAD/DEAH box helicase [Marinobacter adhaerens HP15]
gi|311696498|gb|ADP99371.1| DEAD/DEAH box helicase domain protein [Marinobacter adhaerens HP15]
Length = 440
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 94/141 (66%), Gaps = 3/141 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++Q++ + +P K+ ++ GGV++ + K+ + G ++L+ TPGRL
Sbjct: 76 LILTPTRELAAQVHDSVNLYSKYIP-TKAAVVFGGVKINPQMMKLRK-GLDVLVATPGRL 133
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ ++ + + F +EILVLDEADR+LDMGF + I I+S LP R+ LFSAT + +
Sbjct: 134 MDLYQQ-NAVRFNEVEILVLDEADRMLDMGFIRDIRKILSLLPAKRQNLLFSATFSNEIR 192
Query: 123 ELSKAGLRNPVRVEVRAESKS 143
L++ L NPV+VEV A + S
Sbjct: 193 TLAEGLLDNPVQVEVAARNTS 213
>gi|90577494|ref|ZP_01233305.1| putative ATP-dependent RNA helicase RhlE [Photobacterium angustum
S14]
gi|90440580|gb|EAS65760.1| putative ATP-dependent RNA helicase RhlE [Photobacterium angustum
S14]
Length = 497
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 96/141 (68%), Gaps = 3/141 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL++Q+ + L + S ++ GGV+V + ++ + GA++L+ TPGRL
Sbjct: 77 LVLTPTRELAAQVGESVATYGKNL-RLSSAVVFGGVKVNPQMLRMRK-GADVLVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + + + FR++EILVLDEADR+LDMGF + I I++ LPK R+ LFSAT ++ +
Sbjct: 135 MDLHSQ-NAVKFRDVEILVLDEADRMLDMGFIRDIRKILALLPKERQNLLFSATFSDEIR 193
Query: 123 ELSKAGLRNPVRVEVRAESKS 143
EL+K + NPV ++V +++
Sbjct: 194 ELAKGLVNNPVEIDVNPRNQT 214
>gi|116071349|ref|ZP_01468618.1| DEAD/DEAH box helicase-like protein [Synechococcus sp. BL107]
gi|116066754|gb|EAU72511.1| DEAD/DEAH box helicase-like protein [Synechococcus sp. BL107]
Length = 467
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 95/141 (67%), Gaps = 3/141 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++Q+ A+ + L ++S + GGV ++ VK+++ G ++L+ TPGRL
Sbjct: 109 LILTPTRELAAQVEANAKGYTKYL-GIRSDAVFGGVSIRPQVKRLQG-GVDILVATPGRL 166
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D++ + + F NL+ILVLDEADR+LDMGF + I +I LPK R+ +FSAT + ++
Sbjct: 167 LDLINQ-KTIRFDNLKILVLDEADRMLDMGFIRDIKKVIEFLPKKRQNMMFSATFSAPIK 225
Query: 123 ELSKAGLRNPVRVEVRAESKS 143
+L+ L +PV ++ ++K+
Sbjct: 226 KLALGLLNDPVEIKASVQNKA 246
>gi|260830085|ref|XP_002609992.1| hypothetical protein BRAFLDRAFT_287272 [Branchiostoma floridae]
gi|229295354|gb|EEN66002.1| hypothetical protein BRAFLDRAFT_287272 [Branchiostoma floridae]
Length = 672
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 88/135 (65%), Gaps = 2/135 (1%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+ +I++PTREL Q+ A+ + LP +++ LLVGG+ + V ++++ G +L+ TPG
Sbjct: 301 LALILAPTRELCMQVEDQAKQLMKGLPHMRTALLVGGLPLPPQVHRLQQ-GVQVLVATPG 359
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL DI+ R DV +E+LV+DE D +L +GF++Q+ II LP R+T +FSAT +
Sbjct: 360 RLLDILHRKDV-SLECVEVLVVDELDTMLHLGFREQVLEIIDSLPSQRQTMMFSATIPQP 418
Query: 121 VEELSKAGLRNPVRV 135
+E L+ + L NPV V
Sbjct: 419 IETLASSILNNPVYV 433
>gi|196006399|ref|XP_002113066.1| hypothetical protein TRIADDRAFT_26030 [Trichoplax adhaerens]
gi|190585107|gb|EDV25176.1| hypothetical protein TRIADDRAFT_26030, partial [Trichoplax
adhaerens]
Length = 491
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/147 (41%), Positives = 88/147 (59%), Gaps = 13/147 (8%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEE-----GANLLI 56
+IISPTREL+ Q + V + I D+ + L++GG K +EEE N+++
Sbjct: 82 AIIISPTRELAYQTFEVLRK-IGKKHDMSAGLVIGG-------KSMEEEQRSIIATNIIV 133
Query: 57 GTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
TPGRL M+ D NL++LVLDEADR+LDMGF ++ I+ +P R+T LFSAT
Sbjct: 134 STPGRLLQHMDETPNFDCNNLQLLVLDEADRILDMGFADTMNAILENIPDERQTLLFSAT 193
Query: 117 QTEAVEELSKAGLRNPVRVEVRAESKS 143
QT++V++L++ L P V V S S
Sbjct: 194 QTKSVKDLARLSLNEPAYVSVHENSTS 220
>gi|313682743|ref|YP_004060481.1| dead/deah box helicase domain-containing protein [Sulfuricurvum
kujiense DSM 16994]
gi|313155603|gb|ADR34281.1| DEAD/DEAH box helicase domain protein [Sulfuricurvum kujiense DSM
16994]
Length = 431
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 98/165 (59%), Gaps = 3/165 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++Q+ + + LP +KS ++ GGV + + + G ++LI TPGRL
Sbjct: 78 LILTPTRELAAQVGESVKLYGKYLP-LKSAVIFGGVGINPQITMLRN-GVDILIATPGRL 135
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D + + V D +EI VLDEADR+LDMGF + I +I+ LPK+R+ LFSAT ++ ++
Sbjct: 136 LDHVGQGTV-DLSGVEIFVLDEADRMLDMGFIRDIRRVITILPKVRQNLLFSATYSDDIK 194
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVI 167
L+ LRNP VEV + S + S L K L E+I
Sbjct: 195 TLANTLLRNPAEVEVARRNTSSELVKQSVILVDCKRKSSLLGELI 239
>gi|156362250|ref|XP_001625693.1| predicted protein [Nematostella vectensis]
gi|156212537|gb|EDO33593.1| predicted protein [Nematostella vectensis]
Length = 446
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 107/182 (58%), Gaps = 5/182 (2%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+I++PTREL+ QI + S + VK ++VGG+++ + + ++ +++I TPG
Sbjct: 84 FALILTPTRELAFQISEQCEALGSGI-GVKCAVIVGGIDMMSQALMLAKK-PHIIIATPG 141
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D +E R L+ LV+DEADR+L+M F+K++ ++ +PK RRT LFSAT T+
Sbjct: 142 RLIDHLENTKGFSLRTLKYLVMDEADRILNMDFEKEVDKLLKVIPKERRTFLFSATMTKK 201
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNHHNLL 180
V++L +A L+ PV+VEV + ++ S SK +++ +N++ + ++
Sbjct: 202 VQKLQRASLQAPVKVEVATKYQTVEKLQQSYLFIPSKFK---DCYLVYVLNELAGNSFMV 258
Query: 181 IC 182
C
Sbjct: 259 FC 260
>gi|449533536|ref|XP_004173730.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like, partial
[Cucumis sativus]
Length = 206
Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 98/172 (56%), Gaps = 12/172 (6%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
++SPTREL+ QI + S + +K +LVGGV++ + + ++++GTPG
Sbjct: 33 FACVLSPTRELAIQIAEQFEALGSGI-GIKCAVLVGGVDMVQQAINLAKR-PHVVVGTPG 90
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D + R L+ LVLDEADRLL+ F+K I I++ +P+ RRT LFSAT T+
Sbjct: 91 RLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNEIPRERRTYLFSATMTKK 150
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQL----ASSKTP----LGLHL 164
V +L +A LRNPV++E A +K V QQ A K LGLHL
Sbjct: 151 VRKLQRACLRNPVKIE--AATKYSTVDTLKQQYCFIPAKYKVSILFFLGLHL 200
>gi|209876315|ref|XP_002139600.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
gi|209555206|gb|EEA05251.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
Length = 776
Score = 105 bits (262), Expect = 9e-21, Method: Composition-based stats.
Identities = 65/162 (40%), Positives = 95/162 (58%), Gaps = 27/162 (16%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPD-----VKSVLLVGGVEVKADVKKIEEEGA----- 52
+I++PTREL+ QI + F+S + +K++L +GG ++ A +K I+
Sbjct: 104 IIVAPTRELALQINEILDHFLSFIEKYEGNKLKNMLCIGGKDISATMKYIDTVNNIEVDN 163
Query: 53 -------------NLLIGTPGRLYDIMERM-DVLDF---RNLEILVLDEADRLLDMGFQK 95
++L+GTPGRL+ + + D D+ +LEI +LDEADRLLD+GF+K
Sbjct: 164 KDVYRTNNSQLVYHILVGTPGRLFHMFNILNDGKDWCIKSSLEIFILDEADRLLDLGFEK 223
Query: 96 QISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEV 137
I+ I+ LPK RRTGLFSAT T V L K GLRNP ++V
Sbjct: 224 HINVILRALPKQRRTGLFSATLTSQVCNLIKTGLRNPKFIKV 265
>gi|154299694|ref|XP_001550265.1| hypothetical protein BC1G_11473 [Botryotinia fuckeliana B05.10]
Length = 686
Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 94/162 (58%), Gaps = 16/162 (9%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ V + I + L++GG ++ + +++ N+L+ TPGR
Sbjct: 86 ALIISPTRELAIQIFEVLRK-IGRYHTFSAGLIIGGRSLQEERERLGR--MNILVCTPGR 142
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ M++ D NL++LVLDEADR+LDMGFQ + I+ LPK R+T LFSATQT+ V
Sbjct: 143 MLQHMDQTAAFDVDNLQMLVLDEADRILDMGFQTSVDAILEHLPKQRQTMLFSATQTKKV 202
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLH 163
+L++ L+ P V V + ASS TP L
Sbjct: 203 SDLARLSLKEPEYVAV-------------HEAASSATPTTLQ 231
>gi|336124129|ref|YP_004566177.1| ATP-dependent RNA helicase [Vibrio anguillarum 775]
gi|335341852|gb|AEH33135.1| ATP-dependent RNA helicase [Vibrio anguillarum 775]
Length = 485
Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 89/136 (65%), Gaps = 3/136 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I++PTREL++Q+ + LP ++S ++ GGV+V + K+ G ++L+ TPGR
Sbjct: 97 ALILTPTRELAAQVADNVATYGQNLP-LRSEVIFGGVKVNPQMMKMRR-GVDILVATPGR 154
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D+ + + + F LEILVLDEADR+LDMGF + I I++ LP R+ LFSAT ++ +
Sbjct: 155 LLDLYNQ-NAIKFNQLEILVLDEADRMLDMGFIRDIKKILALLPAKRQNLLFSATFSDEI 213
Query: 122 EELSKAGLRNPVRVEV 137
+L+K + NPV + V
Sbjct: 214 RQLAKGLVNNPVEISV 229
>gi|114564377|ref|YP_751891.1| ATP-dependent RNA helicase DbpA [Shewanella frigidimarina NCIMB
400]
gi|114335670|gb|ABI73052.1| DEAD/DEAH box helicase domain protein [Shewanella frigidimarina
NCIMB 400]
Length = 467
Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 90/138 (65%), Gaps = 2/138 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
M++ PTREL+ Q+ + + +VK + L GGV + V +E GA++++GTPGR+
Sbjct: 83 MVLCPTRELADQVAKDIRTLARGIHNVKVLTLCGGVPMGPQVGSLEH-GAHIIVGTPGRI 141
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++R + LD N+ +L+LDEADR+L+MGFQ+ I II+ P+ R+T LFSAT + ++
Sbjct: 142 VDHLDR-NRLDLSNMNMLILDEADRMLEMGFQQHIDQIIAAAPRERQTLLFSATFPDQIQ 200
Query: 123 ELSKAGLRNPVRVEVRAE 140
++ L PV V+V A+
Sbjct: 201 AIADQILYKPVMVKVEAK 218
>gi|66550432|ref|XP_395653.2| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Apis mellifera]
Length = 452
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 94/143 (65%), Gaps = 2/143 (1%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+I++PTREL+ QI + S++ VK ++VGG+++ + I + ++LI TPG
Sbjct: 88 FALILTPTRELAFQISEQFEALGSSI-GVKCAVIVGGMDMMSQAL-ILAKKPHILIATPG 145
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D +E R+L+ LV+DEADR+L+M F+ ++ I+ +P+ R+T LFSAT T+
Sbjct: 146 RLVDHLENTKGFSLRSLKFLVMDEADRILNMDFEVEVDKILRVIPRERKTLLFSATMTKK 205
Query: 121 VEELSKAGLRNPVRVEVRAESKS 143
V++L +A LRNPV+VEV + ++
Sbjct: 206 VQKLQRASLRNPVKVEVSTKYQT 228
>gi|260222162|emb|CBA31453.1| ATP-independent RNA helicase dbpA [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 460
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 86/137 (62%), Gaps = 2/137 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
M++ PTREL+ Q+ + ++K V L GGV + +E GA++++GTPGR+
Sbjct: 74 MVLCPTRELADQVTVEIRRLARAQDNIKVVTLCGGVATRGQRASLEN-GAHIVVGTPGRI 132
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D++ER + L L LVLDEADR+LDMGF I + + PK R+T LFSAT E +E
Sbjct: 133 MDLLER-EYLTLEGLNTLVLDEADRMLDMGFFDDIVTVARQCPKERQTLLFSATYPEGIE 191
Query: 123 ELSKAGLRNPVRVEVRA 139
+L+K +++P +++V A
Sbjct: 192 KLAKQFMQDPQQIKVEA 208
>gi|170578246|ref|XP_001894333.1| DEAD/DEAH box helicase family protein [Brugia malayi]
gi|158599154|gb|EDP36845.1| DEAD/DEAH box helicase family protein [Brugia malayi]
Length = 797
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 86/134 (64%), Gaps = 3/134 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ Q + V I + +L+GG +V+ + K+I N+++ TPGR
Sbjct: 131 ALIISPTRELAFQTFQVLNK-IGAHHNFSVAVLIGGTDVEFESKRIG--SVNIVVCTPGR 187
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ L+ILV+DEADR+LD+GF +Q++ I+ LPK R+T LFSATQT+ V
Sbjct: 188 LLQHMDENSTFSCEQLQILVIDEADRILDLGFSRQMNAILENLPKNRQTLLFSATQTKNV 247
Query: 122 EELSKAGLRNPVRV 135
++L + LR+P+ +
Sbjct: 248 KDLVRLALRDPLYI 261
>gi|295107314|emb|CBL04857.1| Superfamily II DNA and RNA helicases [Gordonibacter pamelaeae
7-10-1-b]
Length = 445
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 87/136 (63%), Gaps = 3/136 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+++SPTREL+ QI A ++ ++ V +VGGV K + K+ G ++L+ TPGR
Sbjct: 108 ALVVSPTRELALQI-DAACTQLAKGSGLRVVTVVGGVPYKGQLSKLSR-GVDILVATPGR 165
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L+D+MER DV R++EILVLDEADR+LDMGF + I++ P R+T LFSAT V
Sbjct: 166 LHDLMERGDV-KLRDVEILVLDEADRMLDMGFWPTMKKIVAATPSSRQTLLFSATLDRKV 224
Query: 122 EELSKAGLRNPVRVEV 137
+ A LR+P VEV
Sbjct: 225 MQSVSAILRDPAFVEV 240
>gi|425768575|gb|EKV07093.1| ATP-dependent RNA helicase DDX18 [Penicillium digitatum PHI26]
gi|425776136|gb|EKV14370.1| ATP-dependent RNA helicase DDX18 [Penicillium digitatum Pd1]
Length = 602
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 98/152 (64%), Gaps = 5/152 (3%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++SPTREL+ QI+ VA+ ++ ++ +GG +A+ +K+ + G NLLI TPGRL
Sbjct: 195 LVVSPTRELALQIFGVARELMAHHSQTYGIV-IGGANRRAEAEKLMK-GVNLLIATPGRL 252
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPK-LRRTGLFSATQTEAV 121
D ++ F+NL+ LV+DEADR+L++GF+ ++ I+ LPK R+T LFSATQT V
Sbjct: 253 LDHLQNTQGFIFKNLKTLVIDEADRILEVGFEDEMRQIVKILPKEERQTMLFSATQTTKV 312
Query: 122 EELSKAGLR-NPVRVEVRAESKSHHVSASSQQ 152
E+L++ LR P+ + V SK H A +Q
Sbjct: 313 EDLARISLRPGPLYINV-DHSKEHSTVAGLEQ 343
>gi|297794203|ref|XP_002864986.1| hypothetical protein ARALYDRAFT_496826 [Arabidopsis lyrata subsp.
lyrata]
gi|297310821|gb|EFH41245.1| hypothetical protein ARALYDRAFT_496826 [Arabidopsis lyrata subsp.
lyrata]
Length = 591
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 87/135 (64%), Gaps = 2/135 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++I PTREL+ Q Y VA+ + ++V V G E + +I +G NLL+ TPGRL
Sbjct: 189 IVICPTRELAIQSYGVAKELLKY--HSQTVGKVIGGENRKKEAEILAKGVNLLVATPGRL 246
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D +E + F+NL++ V+DEADR+L+ F++ + II LPK R+T LFSATQ+ VE
Sbjct: 247 LDHLENTNGFVFKNLKLFVMDEADRILEQNFEEDLKKIIKLLPKTRQTSLFSATQSAKVE 306
Query: 123 ELSKAGLRNPVRVEV 137
+L++ L +PV ++V
Sbjct: 307 DLARVSLASPVYIDV 321
>gi|449456355|ref|XP_004145915.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Cucumis
sativus]
Length = 449
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 91/154 (59%), Gaps = 4/154 (2%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
++SPTREL+ QI + S + +K +LVGGV++ + + ++++GTPG
Sbjct: 79 FACVLSPTRELAIQIAEQFEALGSGI-GIKCAVLVGGVDMVQQAINLAKR-PHVVVGTPG 136
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D + R L+ LVLDEADRLL+ F+K I I++ +P+ RRT LFSAT T+
Sbjct: 137 RLVDHLTNTKGFSLRTLKYLVLDEADRLLNEDFEKSIDEILNEIPRERRTYLFSATMTKK 196
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVSASSQQLA 154
V +L +A LRNPV++E A +K V QQ
Sbjct: 197 VRKLQRACLRNPVKIE--AATKYSTVDTLKQQYC 228
>gi|292487709|ref|YP_003530582.1| ATP-dependent RNA helicase rhlE [Erwinia amylovora CFBP1430]
gi|292898944|ref|YP_003538313.1| ATP-dependent RNA helicase [Erwinia amylovora ATCC 49946]
gi|428784645|ref|ZP_19002136.1| putative ATP-dependent RNA helicase rhlE [Erwinia amylovora
ACW56400]
gi|291198792|emb|CBJ45901.1| putative ATP-dependent RNA helicase [Erwinia amylovora ATCC 49946]
gi|291553129|emb|CBA20174.1| putative ATP-dependent RNA helicase rhlE [Erwinia amylovora
CFBP1430]
gi|312171822|emb|CBX80079.1| putative ATP-dependent RNA helicase rhlE [Erwinia amylovora ATCC
BAA-2158]
gi|426276207|gb|EKV53934.1| putative ATP-dependent RNA helicase rhlE [Erwinia amylovora
ACW56400]
Length = 470
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 96/146 (65%), Gaps = 4/146 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++Q+ Q + L D++S+++ GGV + + K+ G ++L+ TPGRL
Sbjct: 79 LILTPTRELAAQVGENVQDYSKYL-DMRSLVVFGGVSINPQMMKLRG-GVDVLVATPGRL 136
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D +E + LD +EILVLDEADR+LDMGF I ++++LP R+ LFSAT ++ ++
Sbjct: 137 LD-LEHQNALDLSKVEILVLDEADRMLDMGFIHDIRRVLAKLPAKRQNLLFSATFSDEIK 195
Query: 123 ELSKAGLRNPVRVEV-RAESKSHHVS 147
L++ L NP +VEV R + S V+
Sbjct: 196 TLAEKLLHNPEQVEVARRNTASEQVT 221
>gi|406911902|gb|EKD51608.1| hypothetical protein ACD_62C00220G0002 [uncultured bacterium]
Length = 421
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 99/154 (64%), Gaps = 13/154 (8%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I++PTREL++Q+ + + LP ++S ++ GGV ++A V++++ G ++++ TPGR
Sbjct: 78 ALILTPTRELAAQVCKSVETYGKHLP-LRSTVVFGGVNMEAQVRRLQY-GVDIVVATPGR 135
Query: 62 LYD-IMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
L D I +R +D +++L+LDEADR+LDMGF + II+ LPK R+ LFSAT T
Sbjct: 136 LLDHIGQR--TIDLSRVDVLILDEADRMLDMGFIPDVKRIIALLPKGRQNLLFSATLTNE 193
Query: 121 VEELSKAGLRNPVRVEVRAESKS--------HHV 146
V++L+ L NPV VEV ++ + HHV
Sbjct: 194 VKKLAMGFLNNPVVVEVAPQNTASELVSQVVHHV 227
>gi|380013608|ref|XP_003690844.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Apis
florea]
Length = 452
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 94/143 (65%), Gaps = 2/143 (1%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+I++PTREL+ QI + S++ VK ++VGG+++ + I + ++LI TPG
Sbjct: 88 FALILTPTRELAFQISEQFEALGSSI-GVKCAVIVGGMDMMSQAL-ILAKKPHILIATPG 145
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D +E R+L+ LV+DEADR+L+M F+ ++ I+ +P+ R+T LFSAT T+
Sbjct: 146 RLVDHLENTKGFSLRSLKFLVMDEADRILNMDFEVEVDKILRVIPRERKTLLFSATMTKK 205
Query: 121 VEELSKAGLRNPVRVEVRAESKS 143
V++L +A LRNPV+VEV + ++
Sbjct: 206 VQKLQRASLRNPVKVEVSTKYQT 228
>gi|254565179|ref|XP_002489700.1| ATP-dependent RNA helicase [Komagataella pastoris GS115]
gi|238029496|emb|CAY67419.1| ATP-dependent RNA helicase [Komagataella pastoris GS115]
gi|328350119|emb|CCA36519.1| ATP-dependent RNA helicase DDX18 [Komagataella pastoris CBS 7435]
Length = 546
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 99/152 (65%), Gaps = 4/152 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++I+PTREL+ QI+ VA+ + + +L +GG +A+ +K+ + G N++I TPGR
Sbjct: 159 AIVITPTRELALQIFGVARELMESHSQTFGIL-IGGANRRAEAEKLMK-GVNIIIATPGR 216
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP-KLRRTGLFSATQTEA 120
L D ++ F+NL+ L++DEADR+L++GF+ ++ II LP + R+T LFSATQT
Sbjct: 217 LLDHLQNTKGFIFKNLKALIIDEADRILEIGFEDEMKQIIKILPNENRQTMLFSATQTTK 276
Query: 121 VEELSKAGLR-NPVRVEVRAESKSHHVSASSQ 151
VE+L++ LR P+ + V +E+++ V Q
Sbjct: 277 VEDLARVSLRKGPLYINVDSENETSTVDGLEQ 308
>gi|259909026|ref|YP_002649382.1| ATP-dependent RNA helicase RhlE [Erwinia pyrifoliae Ep1/96]
gi|387871953|ref|YP_005803329.1| ATP-dependent RNA helicase rhlE [Erwinia pyrifoliae DSM 12163]
gi|224964648|emb|CAX56162.1| Putative ATP-dependent RNA helicase [Erwinia pyrifoliae Ep1/96]
gi|283479042|emb|CAY74958.1| putative ATP-dependent RNA helicase rhlE [Erwinia pyrifoliae DSM
12163]
Length = 471
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 96/146 (65%), Gaps = 4/146 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++Q+ Q + L D++S+++ GGV + + K+ G ++L+ TPGRL
Sbjct: 79 LILTPTRELAAQVGENVQDYSKYL-DMRSLVVFGGVSINPQMMKLRG-GVDVLVATPGRL 136
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D +E + LD +EILVLDEADR+LDMGF I ++++LP R+ LFSAT ++ ++
Sbjct: 137 LD-LEHQNALDLSKVEILVLDEADRMLDMGFIHDIRRVLAKLPAKRQNLLFSATFSDEIK 195
Query: 123 ELSKAGLRNPVRVEV-RAESKSHHVS 147
L++ L NP +VEV R + S V+
Sbjct: 196 TLAEKLLHNPEQVEVARRNTASEQVT 221
>gi|365539790|ref|ZP_09364965.1| ATP-dependent RNA helicase [Vibrio ordalii ATCC 33509]
Length = 465
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 89/135 (65%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++Q+ + LP ++S ++ GGV+V + K+ G ++L+ TPGRL
Sbjct: 77 LILTPTRELAAQVADNVATYGQNLP-LRSEVIFGGVKVNPQMMKMRR-GVDILVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + + + F LEILVLDEADR+LDMGF + I I++ LP R+ LFSAT ++ +
Sbjct: 135 LDLYNQ-NAIKFNQLEILVLDEADRMLDMGFIRDIKKILALLPAKRQNLLFSATFSDEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
+L+K + NPV + V
Sbjct: 194 QLAKGLVNNPVEISV 208
>gi|50545487|ref|XP_500281.1| YALI0A20328p [Yarrowia lipolytica]
gi|74660175|sp|Q6CGD1.1|DBP4_YARLI RecName: Full=ATP-dependent RNA helicase DBP4
gi|49646146|emb|CAG84219.1| YALI0A20328p [Yarrowia lipolytica CLIB122]
Length = 740
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 105/182 (57%), Gaps = 11/182 (6%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++ISPTREL+ QI+ V + I + L++GG +V + ++ + N+LI TPGR
Sbjct: 114 ALVISPTRELAVQIFQVLRK-IGRCHSFSAGLVIGGKDVAMEADRLAK--LNILICTPGR 170
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M++ D N+++LVLDEADR+LDMGF+K + I+ LP R+T LFSATQT++V
Sbjct: 171 LLQHMDQTSGFDLSNVKMLVLDEADRILDMGFKKTMDAILENLPVDRQTLLFSATQTKSV 230
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLH--LEVIWNVNQMRNHHNL 179
+L++ L +P + ++ S++ + L + + L L+ +W +R H
Sbjct: 231 SDLARLSLADPKYISANPDT----TSSTPKNLEQNYVCVELQDKLDTLWGF--LRTHTKF 284
Query: 180 LI 181
I
Sbjct: 285 KI 286
>gi|424843891|ref|ZP_18268516.1| DNA/RNA helicase, superfamily II [Saprospira grandis DSM 2844]
gi|395322089|gb|EJF55010.1| DNA/RNA helicase, superfamily II [Saprospira grandis DSM 2844]
Length = 460
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 108/182 (59%), Gaps = 6/182 (3%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+ PT+EL Q+ Q ++ D+K V L GGV + K++E G ++++ TP R
Sbjct: 78 AIIMVPTKELVLQVLEQQQE-LAKYTDIKMVGLYGGVGWQKQAKQLEA-GTDMVVCTPRR 135
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L+++ ERM+ LD R +EIL+LDEADR+LDMGF+ QI+ ++ LP+ ++ LFSAT + V
Sbjct: 136 LFELYERMN-LDLRKVEILILDEADRMLDMGFRSQINTLLDLLPRKKQNLLFSATFSPEV 194
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNHHNLLI 181
EELS + P +VE+ E+ V Q+L + G L ++ ++ Q + N +I
Sbjct: 195 EELSWNFMDFPHKVEITPEATP--VETVEQRLYYTSN-FGTKLNLLVHLFQKEENFNRVI 251
Query: 182 CL 183
Sbjct: 252 IF 253
>gi|226291927|gb|EEH47355.1| ATP-dependent RNA helicase DBP4 [Paracoccidioides brasiliensis
Pb18]
Length = 814
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 102/173 (58%), Gaps = 15/173 (8%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+++SPTREL+ QI+ V + I + L++GG ++ + +++ N+L+ TPGR
Sbjct: 124 ALVLSPTRELAIQIFEVLRK-IGRHHSFSAGLVIGGKSLQEEQERLGR--MNILVCTPGR 180
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ M++ D +++LVLDEADR++DMGFQ + I+ LPK R+T LFSATQT+ V
Sbjct: 181 MLQHMDQTAAFDTNRIQLLVLDEADRIMDMGFQNTVDAIVEHLPKERQTMLFSATQTQKV 240
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSK-----TPLGLHLEVIWN 169
+L++ L++P + V H +ASS A + TPL L+ +W+
Sbjct: 241 SDLARLSLQDPEYISV-------HEAASSATPAKLQQNYIVTPLPEKLDTLWS 286
>gi|393763310|ref|ZP_10351931.1| DEAD/DEAH box helicase [Alishewanella agri BL06]
gi|392605650|gb|EIW88540.1| DEAD/DEAH box helicase [Alishewanella agri BL06]
Length = 416
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 89/136 (65%), Gaps = 3/136 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I++PTREL++Q+ Q + LP ++S L+ GGV++ + + + G ++LI TPGR
Sbjct: 80 ALILTPTRELAAQVAESVQLYGKHLP-LRSTLVFGGVKINPQMMALRK-GVDILIATPGR 137
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D+ ++ + + F LEILVLDEADR+LDMGF + I I++ LP R+ LFSAT +E +
Sbjct: 138 LLDLYQQ-NAVRFNQLEILVLDEADRMLDMGFIRDIKKILALLPPKRQNLLFSATFSEEI 196
Query: 122 EELSKAGLRNPVRVEV 137
L+K L P+ V V
Sbjct: 197 RTLAKGLLHEPLEVTV 212
>gi|258573769|ref|XP_002541066.1| ATP-dependent RNA helicase DDX18 [Uncinocarpus reesii 1704]
gi|237901332|gb|EEP75733.1| ATP-dependent RNA helicase DDX18 [Uncinocarpus reesii 1704]
Length = 568
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 93/137 (67%), Gaps = 4/137 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++SPTREL+ QI+ VA+ ++ ++ +GG +A+ +K+ + G NLLI TPGRL
Sbjct: 164 IVVSPTRELALQIFGVARELMAHHSQTYGIV-IGGANQRAEAEKLTK-GVNLLIATPGRL 221
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP-KLRRTGLFSATQTEAV 121
D ++ D F+NL+ LV+DEADR+L++GF+ Q+ I+ LP + R+T LFSATQT V
Sbjct: 222 LDHLQNTDGFVFKNLKALVIDEADRILEVGFEDQMRQIVKILPSEDRQTMLFSATQTTKV 281
Query: 122 EELSKAGLR-NPVRVEV 137
E+L++ LR P+ + V
Sbjct: 282 EDLARISLRPGPLYINV 298
>gi|358386646|gb|EHK24241.1| hypothetical protein TRIVIDRAFT_31450 [Trichoderma virens Gv29-8]
Length = 479
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 94/149 (63%), Gaps = 7/149 (4%)
Query: 1 MGMIISPTRELSSQIYHVAQPF--ISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGT 58
G++++PTREL++QI Q F + L ++ ++VGG+++ + ++ ++++ T
Sbjct: 126 FGLVLAPTRELAAQI---GQSFEALGALISLRCAVIVGGLDMVPQAIALGKK-PHIIVAT 181
Query: 59 PGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQT 118
PGRL D +E+ R+L+ LV+DEADRLLDM F I I+ +P+ RRT LFSAT +
Sbjct: 182 PGRLVDHLEKTKGFSLRSLKYLVMDEADRLLDMDFGPSIDKILKFIPRERRTYLFSATLS 241
Query: 119 EAVEELSKAGLRNPVRVEVRAESKSHHVS 147
VE L +A LR+PVRV V + SK VS
Sbjct: 242 SKVESLQRASLRDPVRVSV-SSSKYQTVS 269
>gi|330504959|ref|YP_004381828.1| DEAD/DEAH box helicase [Pseudomonas mendocina NK-01]
gi|328919245|gb|AEB60076.1| DEAD/DEAH box helicase domain-containing protein [Pseudomonas
mendocina NK-01]
Length = 447
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 90/136 (66%), Gaps = 3/136 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++++PTREL+ Q+ Q + LP + S + GGV + + K+ + G ++L+ TPGR
Sbjct: 77 ALVLTPTRELAEQVLQSFQAYGQHLP-LTSYAVYGGVSINPQMMKLRK-GVDVLVATPGR 134
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D+ R + + F L+ L+LDEADR+LD+GF +++ + S LPK R+T LFSAT ++A+
Sbjct: 135 LLDLY-RQNAVKFSQLQTLILDEADRMLDLGFARELDELFSALPKKRQTLLFSATFSDAI 193
Query: 122 EELSKAGLRNPVRVEV 137
+++ LR+P+ VEV
Sbjct: 194 RQMAGELLRDPLSVEV 209
>gi|307214659|gb|EFN89598.1| Probable ATP-dependent RNA helicase DDX47 [Harpegnathos saltator]
Length = 377
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 94/143 (65%), Gaps = 2/143 (1%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
++++PTREL+ QI + S++ VK +LVGG+++ A + ++ +++I TPG
Sbjct: 13 FALVLTPTRELAFQISEQFEALGSSI-GVKCAVLVGGMDMSAQALLLSKK-PHIIITTPG 70
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D +E +NL+ LV+ EADR+L+M F+ ++ I+ +P+ RRT LFSAT T+
Sbjct: 71 RLVDYLENTKGFSLQNLKFLVMGEADRILNMDFEIEVDKILRVIPRERRTLLFSATMTKK 130
Query: 121 VEELSKAGLRNPVRVEVRAESKS 143
V++L +A LRNPV+VEV + ++
Sbjct: 131 VQKLQRASLRNPVKVEVSTKYQT 153
>gi|134094897|ref|YP_001099972.1| ATP-dependent RNA helicase DbpA [Herminiimonas arsenicoxydans]
Length = 506
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 92/145 (63%), Gaps = 2/145 (1%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G++I PTREL+ Q+ + + ++K + L GG ++ + +E GA++++GTPGR
Sbjct: 117 GLVICPTRELADQVSNELRRLARFADNIKILTLCGGAPMRPQIASLEH-GAHIVVGTPGR 175
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D + R + ++ ++ LVLDEADR++DMGF ++I+ I+S P+ R+T LFSAT + +
Sbjct: 176 LRDHISR-NTINLSTVQTLVLDEADRMVDMGFYEEIAGIVSACPERRQTLLFSATYPDDI 234
Query: 122 EELSKAGLRNPVRVEVRAESKSHHV 146
+ S LR+PV V+V A+ +
Sbjct: 235 RKASAEFLRDPVEVKVEAQHDDSQI 259
>gi|117919262|ref|YP_868454.1| DEAD/DEAH box helicase [Shewanella sp. ANA-3]
gi|117611594|gb|ABK47048.1| DEAD/DEAH box helicase domain protein [Shewanella sp. ANA-3]
Length = 578
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 89/135 (65%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL++Q+ + + LP ++S ++ GGV + ++K+ G ++L+ TPGRL
Sbjct: 77 LVLTPTRELAAQVSESVETYGKYLP-LRSAVVFGGVPINPQIQKLRH-GVDVLVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D +E+ + F LE+LVLDEADR+LDMGF + I I++ LP R+ +FSAT ++ +
Sbjct: 135 LD-LEQQKAVKFNQLEVLVLDEADRMLDMGFIRDIKKILAMLPAKRQNLMFSATFSDEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
EL+K + PV + V
Sbjct: 194 ELAKGLVNQPVEISV 208
>gi|153822641|ref|ZP_01975308.1| ATP-dependent RNA helicase RhlE, partial [Vibrio cholerae B33]
gi|126519840|gb|EAZ77063.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae B33]
Length = 217
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 91/136 (66%), Gaps = 3/136 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I++PTREL++QI + LP +KS ++ GGV++ ++++ + GA++L+ TPGR
Sbjct: 76 ALILTPTRELAAQIQDNVMLYGRHLP-LKSAVVFGGVKINPQMQRMCK-GADILVATPGR 133
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D+ + + + F LEILVLDEADR+LDMGF + I I+ LP+ R+ LFSAT + +
Sbjct: 134 LMDLYNQ-NAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKRQNLLFSATFSTEI 192
Query: 122 EELSKAGLRNPVRVEV 137
EL+K + NPV + V
Sbjct: 193 RELAKGLVNNPVEISV 208
>gi|395334120|gb|EJF66496.1| DEAD-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 552
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 97/151 (64%), Gaps = 4/151 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ QI+ VA+ + +++ GG K + K+++ G NLLI TPGRL
Sbjct: 95 IIISPTRELALQIFEVARELMQYHSQTFGIIM-GGATRKGEEIKLQK-GVNLLIATPGRL 152
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP-KLRRTGLFSATQTEAV 121
D +E FRNL+ LV+DEADR+L++GF++Q+ II+ LP + R++ LFSATQT V
Sbjct: 153 IDHLEGTKGFVFRNLKSLVIDEADRILEVGFEEQMKKIIATLPNEGRQSMLFSATQTSKV 212
Query: 122 EELSKAGLR-NPVRVEVRAESKSHHVSASSQ 151
+L++ LR P+ V+V + VS +Q
Sbjct: 213 TDLARISLRPGPILVDVDKTEDTSTVSTLTQ 243
>gi|328856886|gb|EGG06005.1| hypothetical protein MELLADRAFT_36393 [Melampsora larici-populina
98AG31]
Length = 668
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 90/138 (65%), Gaps = 4/138 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++ISPTREL+ QI+ V + I + L++GG ++ + +++ + N+LI TPGR
Sbjct: 74 ALVISPTRELAVQIFEVLRS-IGKFHSFSAGLVIGGKSLEDERERLSK--MNILIATPGR 130
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L +E+ D NL++LVLDEADR+LDMGF I+ IIS LP R+T LFSATQT++V
Sbjct: 131 LQQHLEQTTGFDCDNLQVLVLDEADRILDMGFSNSINAIISSLPASRQTLLFSATQTKSV 190
Query: 122 EELSKAGL-RNPVRVEVR 138
++L++ L +P V R
Sbjct: 191 KDLARLSLSEDPEYVAAR 208
>gi|193222330|emb|CAL61847.2| ATP-dependent RNA helicase [Herminiimonas arsenicoxydans]
Length = 464
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 92/145 (63%), Gaps = 2/145 (1%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G++I PTREL+ Q+ + + ++K + L GG ++ + +E GA++++GTPGR
Sbjct: 75 GLVICPTRELADQVSNELRRLARFADNIKILTLCGGAPMRPQIASLEH-GAHIVVGTPGR 133
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D + R + ++ ++ LVLDEADR++DMGF ++I+ I+S P+ R+T LFSAT + +
Sbjct: 134 LRDHISR-NTINLSTVQTLVLDEADRMVDMGFYEEIAGIVSACPERRQTLLFSATYPDDI 192
Query: 122 EELSKAGLRNPVRVEVRAESKSHHV 146
+ S LR+PV V+V A+ +
Sbjct: 193 RKASAEFLRDPVEVKVEAQHDDSQI 217
>gi|374704107|ref|ZP_09710977.1| DEAD/DEAH box helicase [Pseudomonas sp. S9]
Length = 443
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 90/136 (66%), Gaps = 3/136 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+++ PTREL+ Q+ Q + LP ++S + GGV + + K+ + G ++L+ TPGR
Sbjct: 77 ALVLVPTRELAEQVQQSFQAYGQHLP-LRSYAVYGGVSINPQMMKLRK-GLDVLVATPGR 134
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D+ R + + F L++LVLDEADR+LD+GF +++ + S LPK R+T LFSAT ++A+
Sbjct: 135 LLDLY-RQNAVKFNQLQVLVLDEADRMLDLGFARELDDLFSALPKKRQTLLFSATFSDAI 193
Query: 122 EELSKAGLRNPVRVEV 137
L+ LR+P+ +EV
Sbjct: 194 RRLAGEMLRDPLSIEV 209
>gi|322700332|gb|EFY92088.1| ATP-dependent RNA helicase DBP4 [Metarhizium acridum CQMa 102]
Length = 796
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 100/167 (59%), Gaps = 5/167 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ V + I + L++GG +K + +++ N+L+ TPGR
Sbjct: 125 ALIISPTRELAVQIFEVLRK-IGRYHVFSAGLVIGGKNLKEEAERLAR--MNILVCTPGR 181
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ +++ LD NL+ILVLDEADR++DMGFQ + ++ LPK R+T +FSATQ++ V
Sbjct: 182 MLQHLDQTAGLDANNLQILVLDEADRIMDMGFQSAVDALVEHLPKSRQTLMFSATQSKKV 241
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIW 168
+L++ L+ P V V + S + Q + TPL L+ ++
Sbjct: 242 SDLARLSLKEPEYVSVHEAATSATPTNLQQHYIT--TPLPEKLDTLY 286
>gi|399023038|ref|ZP_10725105.1| DNA/RNA helicase, superfamily II [Chryseobacterium sp. CF314]
gi|398083597|gb|EJL74302.1| DNA/RNA helicase, superfamily II [Chryseobacterium sp. CF314]
Length = 420
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 96/168 (57%), Gaps = 3/168 (1%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I++PTREL+ QI + LP +K +++ GGV+ + + + G ++L+ TPGR
Sbjct: 76 ALILTPTRELAIQIEESFNAYGRNLP-LKKLVIFGGVKQGSQEAALRK-GVDILVATPGR 133
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D + + ++ +NLEI VLDEADR+LDMGF + II LP R+T FSAT +
Sbjct: 134 LLDFIAQ-GIISLKNLEIFVLDEADRMLDMGFVHDVKRIIKLLPPRRQTLFFSATMPTEI 192
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWN 169
++L+ + L NPV+VEV S + S + LGL ++ N
Sbjct: 193 QKLADSILNNPVKVEVTPVSSTAETIQQSVYFVQKEDKLGLLTHILKN 240
>gi|355752613|gb|EHH56733.1| hypothetical protein EGM_06198 [Macaca fascicularis]
Length = 872
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + D + L++GG ++K + ++I N+L+ TPGRL
Sbjct: 145 LIISPTRELAYQTFEVLRK-VGKNHDFSAGLIIGGKDLKHEAERIN--NINILVRTPGRL 201
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ +L++LVLDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 202 LQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 261
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L++P V V ++K
Sbjct: 262 DLARLSLKDPEYVWVHEKAK 281
>gi|340522166|gb|EGR52399.1| predicted protein [Trichoderma reesei QM6a]
Length = 482
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 94/149 (63%), Gaps = 7/149 (4%)
Query: 1 MGMIISPTRELSSQIYHVAQPF--ISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGT 58
G++++PTREL++QI Q F + L ++ ++VGG+++ + ++ ++++ T
Sbjct: 128 FGLVLAPTRELAAQI---GQSFEALGALISLRCAVIVGGLDMVPQAIALGKK-PHIIVAT 183
Query: 59 PGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQT 118
PGRL D +E+ R+L+ LV+DEADRLLDM F I I+ +P+ RRT LFSAT +
Sbjct: 184 PGRLVDHLEKTKGFSLRSLKYLVMDEADRLLDMDFGPSIDKILKFIPRERRTYLFSATLS 243
Query: 119 EAVEELSKAGLRNPVRVEVRAESKSHHVS 147
VE L +A LR+PVRV V + SK VS
Sbjct: 244 SKVESLQRASLRDPVRVSV-SSSKYQTVS 271
>gi|308502029|ref|XP_003113199.1| hypothetical protein CRE_25342 [Caenorhabditis remanei]
gi|308265500|gb|EFP09453.1| hypothetical protein CRE_25342 [Caenorhabditis remanei]
Length = 577
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 91/145 (62%), Gaps = 4/145 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+SP+REL SQI +V +PF L ++ + GG +V ++K + + N+L+ TPGR
Sbjct: 83 ALILSPSRELCSQIVNVIKPFADKL-NLTVETVTGGQKVDKNIKMFKSKSINILVATPGR 141
Query: 62 LYDIMER---MDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQT 118
L+ I++ M + +++LV+DEADR ++ F+ + I+S +PK RRTGLFSATQ
Sbjct: 142 LFQIIQHEKTMIARAMKGVQLLVIDEADRFNEIQFEDHMREILSCIPKQRRTGLFSATQV 201
Query: 119 EAVEELSKAGLRNPVRVEVRAESKS 143
+ ++L GLRN +V+V E S
Sbjct: 202 KEEDDLMVFGLRNAKQVKVSQERNS 226
>gi|87121447|ref|ZP_01077336.1| ATP-dependent RNA helicase, DEAD box family protein [Marinomonas
sp. MED121]
gi|86163290|gb|EAQ64566.1| ATP-dependent RNA helicase, DEAD box family protein [Marinomonas
sp. MED121]
Length = 418
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 93/141 (65%), Gaps = 3/141 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ Q+Y + LP ++SV+ GG + + +I + G ++L+ TPGRL
Sbjct: 81 LVLTPTRELAQQVYKSFCDYGQALP-LRSVVAYGGASINPQIDEIRQ-GVDVLVATPGRL 138
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
+++ + D++D L+ LVLDEADR+LDMGF I I+ RLP+ ++T FSAT +A+
Sbjct: 139 LELVMK-DLVDVSQLKTLVLDEADRMLDMGFIIDIQRILKRLPQQKQTLFFSATFDDAIF 197
Query: 123 ELSKAGLRNPVRVEVRAESKS 143
+LSK L++PV +EV + S
Sbjct: 198 KLSKTLLQDPVLIEVDQRNTS 218
>gi|86147794|ref|ZP_01066101.1| ATP-dependent RNA helicase, DEAD box family protein [Vibrio sp.
MED222]
gi|85834432|gb|EAQ52583.1| ATP-dependent RNA helicase, DEAD box family protein [Vibrio sp.
MED222]
Length = 412
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 91/140 (65%), Gaps = 3/140 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II PTREL+SQ+ +P +TL D+K+V L GGV+++ +++ E+ L+I TPGR
Sbjct: 71 AIIIVPTRELASQVAKALEPIATTL-DIKTVTLTGGVDIEIQQQQLLEK-PQLVIATPGR 128
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L+ +++ + L+ + L+LDEADRLLDMGF + IIS LPK +T LFSAT + +
Sbjct: 129 LHAVIQE-NKLELTQCKSLILDEADRLLDMGFWPDVQTIISALPKKHQTLLFSATLPKEL 187
Query: 122 EELSKAGLRNPVRVEVRAES 141
++A L NPV+V E+
Sbjct: 188 ISQTEALLVNPVKVTTHQEN 207
>gi|163755613|ref|ZP_02162732.1| DEAD/DEAH box helicase-like protein [Kordia algicida OT-1]
gi|161324526|gb|EDP95856.1| DEAD/DEAH box helicase-like protein [Kordia algicida OT-1]
Length = 438
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 93/142 (65%), Gaps = 3/142 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I++PTREL++Q+Y + + ST D++S ++ GGV + + + G ++L+ TPGR
Sbjct: 76 ALILTPTRELAAQVYANVKEY-STFLDIRSTVIFGGVNARPQIATLRN-GVDILVATPGR 133
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D+ + L +E+LVLDEADR+LDMGF + I +I +PK R+ LFSAT ++ +
Sbjct: 134 LLDLHSQ-KALSLAKVEMLVLDEADRMLDMGFLRDIKRVIELVPKRRQNLLFSATFSKDI 192
Query: 122 EELSKAGLRNPVRVEVRAESKS 143
++L+++ L +PV VE E+ +
Sbjct: 193 KKLAQSILHHPVSVEATPENTT 214
>gi|50420521|ref|XP_458797.1| DEHA2D07744p [Debaryomyces hansenii CBS767]
gi|74659356|sp|Q6BSM3.1|SPB4_DEBHA RecName: Full=ATP-dependent rRNA helicase SPB4
gi|49654464|emb|CAG86941.1| DEHA2D07744p [Debaryomyces hansenii CBS767]
Length = 614
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 96/154 (62%), Gaps = 6/154 (3%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPD----VKSVLLVGGVE-VKADVKKIEEEGANLL 55
+ +I+SPTREL+ QI V + +P+ +K+ LLVG + V+ D+ ++L
Sbjct: 95 LSIILSPTRELAKQIQTVFDKVLEYIPEDKATIKTQLLVGSLSSVREDIDYFLTNKTHIL 154
Query: 56 IGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSA 115
I TPGRL D + + + ++EI VLDEAD+LLD+ F++ + I+ +LPK RRTGLFSA
Sbjct: 155 IATPGRLLDFLSS-NYVKTNSVEIAVLDEADKLLDISFERDVIKILKQLPKQRRTGLFSA 213
Query: 116 TQTEAVEELSKAGLRNPVRVEVRAESKSHHVSAS 149
T + A + + + G+ NPV++ V++++ + S
Sbjct: 214 TISSAGDTIFRTGMANPVKIVVKSKNSKNAAPTS 247
>gi|113971464|ref|YP_735257.1| DEAD/DEAH box helicase domain-containing protein [Shewanella sp.
MR-4]
gi|113886148|gb|ABI40200.1| DEAD/DEAH box helicase domain protein [Shewanella sp. MR-4]
Length = 549
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 89/135 (65%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL++Q+ + + LP ++S ++ GGV + ++K+ G ++L+ TPGRL
Sbjct: 77 LVLTPTRELAAQVSESVETYGKYLP-LRSAVVFGGVPINPQIQKLRH-GVDVLVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D +E+ + F LE+LVLDEADR+LDMGF + I I++ LP R+ +FSAT ++ +
Sbjct: 135 LD-LEQQKAVKFNQLEVLVLDEADRMLDMGFIRDIKKILAMLPAKRQNLMFSATFSDEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
EL+K + PV + V
Sbjct: 194 ELAKGLVNQPVEISV 208
>gi|156717218|ref|NP_001096151.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Xenopus (Silurana)
tropicalis]
gi|148921499|gb|AAI46616.1| ddx10 protein [Xenopus (Silurana) tropicalis]
Length = 852
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 89/140 (63%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + + + L++GG ++K + I N+LI TPGRL
Sbjct: 149 LIISPTRELAYQTFEVLRK-VGRNHEFSAGLVIGGKDLKQETACIHR--TNILICTPGRL 205
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ NL++LVLDEADR+LDMGF ++ I+ LPK R+T LFSATQT++V+
Sbjct: 206 LQHMDETSTFHASNLQMLVLDEADRILDMGFADTMNAIVENLPKKRQTLLFSATQTKSVK 265
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L++P V V +K
Sbjct: 266 DLARLSLKDPEYVWVHENAK 285
>gi|409051397|gb|EKM60873.1| hypothetical protein PHACADRAFT_110678 [Phanerochaete carnosa
HHB-10118-sp]
Length = 542
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 99/151 (65%), Gaps = 4/151 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+SPTREL+ QI+ VA+ ++ +++ GG +A+ K+++ G NL++ TPGRL
Sbjct: 98 VIVSPTRELALQIFGVAKELMAHHSQTFGIVM-GGANRRAEADKLQK-GVNLVVATPGRL 155
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLP-KLRRTGLFSATQTEAV 121
D +E FRNL+ LV+DEADR+L++GF++++ II+ LP + R++ LFSATQT V
Sbjct: 156 LDHLENTKGFVFRNLKCLVIDEADRILEVGFEEEMKKIIAILPNENRQSMLFSATQTTKV 215
Query: 122 EELSKAGLR-NPVRVEVRAESKSHHVSASSQ 151
+L++ LR P+ ++V + VS SQ
Sbjct: 216 TDLARISLRPGPLYIDVDKTESTSTVSTLSQ 246
>gi|348530130|ref|XP_003452564.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 [Oreochromis
niloticus]
Length = 922
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 92/141 (65%), Gaps = 3/141 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ Q + V + + + + L++GG ++K++ ++I N++I TPGR
Sbjct: 215 ALIISPTRELAYQTFEVLRK-VGRNHEFSAGLIIGGKDMKSECERIHR--TNIVICTPGR 271
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ +L +LVLDEADR+LDMGF ++ I+ LPK R+T LFSATQT++V
Sbjct: 272 LLQHMDETATFHASDLHMLVLDEADRILDMGFADTLNAIVENLPKSRQTLLFSATQTKSV 331
Query: 122 EELSKAGLRNPVRVEVRAESK 142
++L++ L++P V V ++K
Sbjct: 332 KDLARLSLKDPEYVWVHEKAK 352
>gi|227356697|ref|ZP_03841083.1| ATP-dependent RNA helicase [Proteus mirabilis ATCC 29906]
gi|425067413|ref|ZP_18470529.1| hypothetical protein HMPREF1311_00567 [Proteus mirabilis WGLW6]
gi|227163205|gb|EEI48136.1| ATP-dependent RNA helicase [Proteus mirabilis ATCC 29906]
gi|404601244|gb|EKB01657.1| hypothetical protein HMPREF1311_00567 [Proteus mirabilis WGLW6]
Length = 465
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 90/136 (66%), Gaps = 3/136 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I++PTREL++QI + + LP ++S+++ GGV + + K+ G ++LI TPGR
Sbjct: 79 ALILTPTRELAAQIADNVKAYSRYLP-IRSLVVFGGVSINPQMMKLRG-GVDVLIATPGR 136
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D +E + +D +E+LVLDEADR+LDMGF I +I++LPK R+ LFSAT ++ +
Sbjct: 137 LLD-LEHQNAVDLSRVEVLVLDEADRMLDMGFIHDIRRVINKLPKKRQNLLFSATFSKEI 195
Query: 122 EELSKAGLRNPVRVEV 137
L+ + L NP+ + V
Sbjct: 196 TGLANSLLNNPISIAV 211
>gi|339324212|ref|YP_004683905.1| ATP-independent RNA helicase DbpA [Cupriavidus necator N-1]
gi|338164369|gb|AEI75424.1| ATP-independent RNA helicase DbpA [Cupriavidus necator N-1]
Length = 469
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 85/137 (62%), Gaps = 2/137 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
M++ PTREL+ Q+ + ++K + L GG ++ V + GA++++GTPGR+
Sbjct: 84 MVLCPTRELADQVTQEIRRLARAEENIKVLTLCGGSPMRPQVDSLIH-GAHIVVGTPGRI 142
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++R LD + LVLDEADR+LDMGF I+Y+ SR PK R+T LFSAT ++
Sbjct: 143 LDHIDR-GSLDLSGINTLVLDEADRMLDMGFFDDIAYVASRCPKDRQTLLFSATYPPGID 201
Query: 123 ELSKAGLRNPVRVEVRA 139
+LS LRNP V++ A
Sbjct: 202 KLSHRFLRNPQSVKLEA 218
>gi|156049233|ref|XP_001590583.1| hypothetical protein SS1G_08323 [Sclerotinia sclerotiorum 1980]
gi|160380617|sp|A7ESL8.1|DBP4_SCLS1 RecName: Full=ATP-dependent RNA helicase dbp4
gi|154692722|gb|EDN92460.1| hypothetical protein SS1G_08323 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 808
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 94/162 (58%), Gaps = 16/162 (9%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ V + I + L++GG ++ + +++ N+L+ TPGR
Sbjct: 124 ALIISPTRELAIQIFEVLRK-IGRYHTFSAGLIIGGRSLQEERERLGR--MNILVCTPGR 180
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ M++ D NL++LVLDEADR++DMGFQ + I+ LPK R+T LFSATQT+ V
Sbjct: 181 MLQHMDQTAAFDVDNLQMLVLDEADRIMDMGFQTSVDAILEHLPKQRQTMLFSATQTKKV 240
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLH 163
+L++ L+ P V V + ASS TP L
Sbjct: 241 SDLARLSLKEPEYVAV-------------HEAASSATPTTLQ 269
>gi|268565311|ref|XP_002639404.1| Hypothetical protein CBG03992 [Caenorhabditis briggsae]
Length = 750
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 87/140 (62%), Gaps = 3/140 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++ISPTREL+ Q + + L++GG EV + +I G N+++ TPGR
Sbjct: 151 ALVISPTRELALQTFSTINA-VGKHHGFSCGLVIGGSEVAFERNRIS--GINIIVCTPGR 207
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ + ++ +L+ILVLDEADR+LDMGF KQ++ II+ LP R+T LFSATQT V
Sbjct: 208 LLQHMDENEQMNCDSLQILVLDEADRMLDMGFSKQLNSIINNLPAERQTLLFSATQTRNV 267
Query: 122 EELSKAGLRNPVRVEVRAES 141
++LS+ +PV V V S
Sbjct: 268 KDLSRVCTNDPVFVSVHENS 287
>gi|145539279|ref|XP_001455334.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423133|emb|CAK87937.1| unnamed protein product [Paramecium tetraurelia]
Length = 451
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 97/150 (64%), Gaps = 4/150 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+SPTREL QI Q +++ +KSV+++GG++ A K + ++ +++IGTPG+
Sbjct: 83 ALILSPTRELCVQIQEHFQAIGASIA-LKSVVILGGMDPLAQAKALAQK-PHIIIGTPGK 140
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ +E + + L+ LVLDEAD+LL+M F+++I+ I+ +PK R T LFSAT T V
Sbjct: 141 ILYHLENTKGFNLKQLKFLVLDEADKLLNMDFEREINAILDIIPKERNTYLFSATMTNKV 200
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQ 151
+L +A L++PV++EV SK VS Q
Sbjct: 201 SKLQRASLKDPVKIEV--SSKYQTVSTLQQ 228
>gi|441504874|ref|ZP_20986866.1| ATP-dependent RNA helicase RhlE [Photobacterium sp. AK15]
gi|441427456|gb|ELR64926.1| ATP-dependent RNA helicase RhlE [Photobacterium sp. AK15]
Length = 498
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 91/135 (67%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++Q+ + LP + S ++ GGV++ + ++ + GA++L+ TPGRL
Sbjct: 77 LILTPTRELAAQVGENVATYSKRLP-LSSAVVFGGVKINPQMMRMRK-GADVLVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + + + F LE+LVLDEADR+LDMGF + I I++ LPK R+ LFSAT ++ +
Sbjct: 135 LDLYNQ-NAVKFNQLEVLVLDEADRMLDMGFIRDIKKILALLPKQRQNLLFSATFSDEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
EL+K + +PV + V
Sbjct: 194 ELAKGLVNDPVEISV 208
>gi|378726604|gb|EHY53063.1| hypothetical protein HMPREF1120_01264 [Exophiala dermatitidis
NIH/UT8656]
Length = 864
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 108/182 (59%), Gaps = 5/182 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+SPTREL+ QI+ V + + + L++GG ++ + ++ N+L+ TPGR
Sbjct: 127 ALILSPTRELAIQIFEVLRK-VGRNHTFSAGLVIGGKSLQEERDRLGR--MNILVATPGR 183
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ M++ LD NL++LVLDEADR++DMGF+ + +I LP+ R+T +FSATQT+ V
Sbjct: 184 MLQHMDQTAELDIGNLQMLVLDEADRIMDMGFKATLDALIEHLPRERQTLMFSATQTKRV 243
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNHHNLLI 181
+L++ L +P V V ++S + S+ Q TPL L+V+W+ + +L+
Sbjct: 244 SDLARLSLTDPEFVSVHEGAES--ATPSTLQQNYIVTPLAEKLDVLWSFIRANVKKKILV 301
Query: 182 CL 183
L
Sbjct: 302 FL 303
>gi|112419200|gb|AAI22412.1| Ddx10 protein [Danio rerio]
Length = 439
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 90/141 (63%), Gaps = 3/141 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ Q + V + + + + L++GG ++K + +KI N++I TPGR
Sbjct: 145 ALIISPTRELAYQTFEVLRK-VGKNHEFSAGLVIGGKDLKDESEKIHR--TNIIICTPGR 201
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ +L +LVLDEADR+LDMGF ++ I+ LPK R+T LFSATQT +V
Sbjct: 202 LLQHMDETAAFHASDLHMLVLDEADRILDMGFADTLNAIVENLPKSRQTLLFSATQTRSV 261
Query: 122 EELSKAGLRNPVRVEVRAESK 142
++L++ L++P V V ++K
Sbjct: 262 KDLARLSLKDPEYVWVHEQAK 282
>gi|88798356|ref|ZP_01113941.1| ATP-dependent RNA helicase, DEAD box family protein [Reinekea
blandensis MED297]
gi|88778796|gb|EAR09986.1| ATP-dependent RNA helicase, DEAD box family protein [Reinekea sp.
MED297]
Length = 433
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 89/135 (65%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL++Q+ + + DV+S ++ GGV++ ++K+ G ++L+ TPGRL
Sbjct: 78 LVLTPTRELAAQVEDNVTAY-AKYTDVRSEVVFGGVKINPQMQKLRR-GVDILVATPGRL 135
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D + + +DFR+LE+LVLDEADR+LDMGF I I+ LP R+ +FSAT ++ +
Sbjct: 136 LD-LHSQNAIDFRDLEVLVLDEADRMLDMGFIHDIRRIMRLLPTQRQNLMFSATFSDEIR 194
Query: 123 ELSKAGLRNPVRVEV 137
L+K + NPV V V
Sbjct: 195 ALAKTIVENPVEVSV 209
>gi|425073153|ref|ZP_18476259.1| hypothetical protein HMPREF1310_02594 [Proteus mirabilis WGLW4]
gi|404595790|gb|EKA96324.1| hypothetical protein HMPREF1310_02594 [Proteus mirabilis WGLW4]
Length = 465
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 90/136 (66%), Gaps = 3/136 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I++PTREL++QI + + LP ++S+++ GGV + + K+ G ++LI TPGR
Sbjct: 79 ALILTPTRELAAQIADNVKAYSRYLP-IRSLVVFGGVSINPQMMKLRG-GVDVLIATPGR 136
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D +E + +D +E+LVLDEADR+LDMGF I +I++LPK R+ LFSAT ++ +
Sbjct: 137 LLD-LEHQNAVDLSRVEVLVLDEADRMLDMGFIHDIRRVINKLPKKRQNLLFSATFSKEI 195
Query: 122 EELSKAGLRNPVRVEV 137
L+ + L NP+ + V
Sbjct: 196 TGLANSLLNNPISIAV 211
>gi|335041830|ref|ZP_08534857.1| superfamily II DNA and RNA helicase [Methylophaga
aminisulfidivorans MP]
gi|333788444|gb|EGL54326.1| superfamily II DNA and RNA helicase [Methylophaga
aminisulfidivorans MP]
Length = 433
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 92/136 (67%), Gaps = 3/136 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++++PTREL++Q+ + + LP ++S ++ GGV++ + ++ G ++L+ TPGR
Sbjct: 76 ALVLTPTRELAAQVEESIKTYGKYLP-LRSAVVFGGVKINPQMMQMRR-GVDVLVATPGR 133
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D+ ++ + + F LE+LVLDEADR+LDMGF I II+ LP+ R+T LFSAT + +
Sbjct: 134 LLDLYQQ-NAIRFDELEVLVLDEADRMLDMGFIHDIRKIINMLPQKRQTLLFSATFSNEI 192
Query: 122 EELSKAGLRNPVRVEV 137
EL+K ++NPV + V
Sbjct: 193 RELAKRLVKNPVEISV 208
>gi|255079166|ref|XP_002503163.1| dead-box ATP-dependent RNA helicase [Micromonas sp. RCC299]
gi|226518429|gb|ACO64421.1| dead-box ATP-dependent RNA helicase [Micromonas sp. RCC299]
Length = 450
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 92/140 (65%), Gaps = 2/140 (1%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+++SPTREL+ QI + + + VK+ +LVGG+++ A ++ + ++++GTPG
Sbjct: 85 FALVLSPTRELAIQIAEQFEALGAGI-GVKTAVLVGGIDMMAQSIQLGKR-PHVVVGTPG 142
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
R+ D + + L++L LDEADRLL++ F+++I I+ +P+ RRT LFSAT T
Sbjct: 143 RVVDHLTNTKGFTLKQLQVLCLDEADRLLNLDFEQEIDQILKVVPRDRRTQLFSATMTSK 202
Query: 121 VEELSKAGLRNPVRVEVRAE 140
V +L +A LRNPV+VEV A+
Sbjct: 203 VAKLQRACLRNPVKVEVSAK 222
>gi|83593250|ref|YP_427002.1| DEAD/DEAH box helicase [Rhodospirillum rubrum ATCC 11170]
gi|386349984|ref|YP_006048232.1| DEAD/DEAH box helicase [Rhodospirillum rubrum F11]
gi|83576164|gb|ABC22715.1| DEAD/DEAH box helicase [Rhodospirillum rubrum ATCC 11170]
gi|346718420|gb|AEO48435.1| DEAD/DEAH box helicase [Rhodospirillum rubrum F11]
Length = 393
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 85/135 (62%), Gaps = 2/135 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL+ QI TL ++ ++VGGV++ + ++ G +L+ TPGRL
Sbjct: 79 LILTPTRELAQQITESIGDLGRTLSAIRCGVVVGGVDILRQTRMVQR-GLEILVATPGRL 137
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+M R V D R +E+LVLDEADR+LDMGF + I + LP+ R+T +FSAT V
Sbjct: 138 QDLMNRKAV-DLRAIEVLVLDEADRMLDMGFAPAVKKIAAVLPRKRQTVMFSATLPNEVT 196
Query: 123 ELSKAGLRNPVRVEV 137
L + + +PVRVEV
Sbjct: 197 GLVASLMNDPVRVEV 211
>gi|197284517|ref|YP_002150389.1| ATP-dependent RNA helicase [Proteus mirabilis HI4320]
gi|194682004|emb|CAR41470.1| putative ATP-dependent RNA helicase [Proteus mirabilis HI4320]
Length = 465
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 90/136 (66%), Gaps = 3/136 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I++PTREL++QI + + LP ++S+++ GGV + + K+ G ++LI TPGR
Sbjct: 79 ALILTPTRELAAQIADNVKAYSRYLP-IRSLVVFGGVSINPQMMKLRG-GVDVLIATPGR 136
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D +E + +D +E+LVLDEADR+LDMGF I +I++LPK R+ LFSAT ++ +
Sbjct: 137 LLD-LEHQNAVDLSRVEVLVLDEADRMLDMGFIHDIRRVINKLPKKRQNLLFSATFSKEI 195
Query: 122 EELSKAGLRNPVRVEV 137
L+ + L NP+ + V
Sbjct: 196 TGLANSLLNNPISIAV 211
>gi|163801279|ref|ZP_02195178.1| ATP-dependent RNA helicase RhlE [Vibrio sp. AND4]
gi|159174768|gb|EDP59568.1| ATP-dependent RNA helicase RhlE [Vibrio sp. AND4]
Length = 472
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 96/148 (64%), Gaps = 4/148 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++Q+ + LP + S ++ GGV++ ++++ + GA++L+ TPGRL
Sbjct: 77 LILTPTRELAAQVQESVFTYSQHLP-LNSAVVFGGVKINPQMQRLRK-GADVLVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + + + F LE+LVLDEADR+LDMGF + I I+ LPK R+ LFSAT ++ +
Sbjct: 135 MDLYSQ-NAVKFDQLEVLVLDEADRMLDMGFIRDIRKILDLLPKQRQNLLFSATFSDEIR 193
Query: 123 ELSKAGLRNPVRVEVR-AESKSHHVSAS 149
+L+K + NPV + V A S + V S
Sbjct: 194 DLAKGLVNNPVEISVNPANSTARTVEQS 221
>gi|408489495|ref|YP_006865864.1| ATP-dependent RNA helicase RhlE [Psychroflexus torquis ATCC 700755]
gi|408466770|gb|AFU67114.1| ATP-dependent RNA helicase RhlE [Psychroflexus torquis ATCC 700755]
Length = 423
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 94/151 (62%), Gaps = 5/151 (3%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++Q++ + + D++S ++ GGV K+ V + G ++L+ TPGRL
Sbjct: 77 LILTPTRELAAQVHQSVKDY-GKFVDLRSTVIFGGVNQKSQVSTLRN-GVDVLVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D + +L +EILVLDEADR+LDMGF + I I+ +PK R+T LFSAT + +
Sbjct: 135 ID-LNNQGLLSLAKVEILVLDEADRMLDMGFLRDIKKIMKLIPKQRQTLLFSATFSREIR 193
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQL 153
L+ L+NPV VE E+ + V A QQ+
Sbjct: 194 SLASEFLKNPVSVESTPENTT--VEAIEQQV 222
>gi|302495954|ref|XP_003009989.1| hypothetical protein ARB_03800 [Arthroderma benhamiae CBS 112371]
gi|291173514|gb|EFE29344.1| hypothetical protein ARB_03800 [Arthroderma benhamiae CBS 112371]
Length = 656
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 96/166 (57%), Gaps = 23/166 (13%)
Query: 17 HVAQPFISTLPDVKSVLLVGGVEVKA-DVKKIEEEGANLLIGTPGRLYDIMERMDV-LDF 74
+P+ S+ V LL+GG A D+ + NLLI TPGRL +++ V
Sbjct: 134 ETGKPYRSSTLSVIPQLLLGGTTTPAQDLSVFLKRSPNLLISTPGRLLELLSSPHVHCPQ 193
Query: 75 RNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVR 134
+ E+LVLDEADRLLD+GF+ + I++RLPK RRTGLFSA+ +EAV+++ + GLRNPV+
Sbjct: 194 SSFEVLVLDEADRLLDLGFKDDLQKILARLPKQRRTGLFSASVSEAVDQIVRVGLRNPVK 253
Query: 135 VEVR-----AESK---------------SHHVSASSQQLAS-SKTP 159
+ V+ AE K SH + A S+ L+S S TP
Sbjct: 254 IAVKVRGAGAEDKRTPASLQMTYLATRPSHRIPALSKLLSSISPTP 299
>gi|113866090|ref|YP_724579.1| ATP-dependent RNA helicase DbpA [Ralstonia eutropha H16]
gi|113524866|emb|CAJ91211.1| ATP-dependent RNA helicase [Ralstonia eutropha H16]
Length = 469
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 85/137 (62%), Gaps = 2/137 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
M++ PTREL+ Q+ + ++K + L GG ++ V + GA++++GTPGR+
Sbjct: 84 MVLCPTRELADQVTQEIRRLARAEENIKVLTLCGGSPMRPQVDSLIH-GAHIVVGTPGRI 142
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++R LD + LVLDEADR+LDMGF I+Y+ SR PK R+T LFSAT ++
Sbjct: 143 LDHIDR-GSLDLSGINTLVLDEADRMLDMGFFDDIAYVASRCPKDRQTLLFSATYPPGID 201
Query: 123 ELSKAGLRNPVRVEVRA 139
+LS LRNP V++ A
Sbjct: 202 KLSHRFLRNPQSVKLEA 218
>gi|350563003|ref|ZP_08931826.1| DEAD/DEAH box helicase domain protein [Thioalkalimicrobium
aerophilum AL3]
gi|349779869|gb|EGZ34210.1| DEAD/DEAH box helicase domain protein [Thioalkalimicrobium
aerophilum AL3]
Length = 467
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 95/158 (60%), Gaps = 5/158 (3%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G+++ PTREL+ Q+ + +P+VK + L GG + A +++ GA++++GTPGR
Sbjct: 79 GLVLCPTRELADQVAEEIRRLARQMPNVKVLTLCGGSNLAAQQSSLQQ-GAHIIVGTPGR 137
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ + + R L L+ LVLDEADR+L+MGFQ I I++ LP R+T LFSAT +A+
Sbjct: 138 IEEHL-RQQTLSLSGLKTLVLDEADRMLEMGFQPAIEAILATLPTPRQTLLFSATFPDAI 196
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTP 159
+++ + NP+ ++V + H S+ +Q TP
Sbjct: 197 AQMASHVMHNPITIKVAIQ---HEPSSINQAFYKVDTP 231
>gi|302902561|ref|XP_003048671.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729605|gb|EEU42958.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 804
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 101/168 (60%), Gaps = 5/168 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+SPTREL+ QI+ V + + + L++GG +K + ++++ N+L+ TPGR
Sbjct: 127 ALILSPTRELAVQIFEVLRK-VGRNHVFSAGLVIGGKSLKEEAERLDR--MNILVCTPGR 183
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ +++ D NL+ILVLDEADR++DMGFQ + ++ LPK R+T +FSATQ++ V
Sbjct: 184 MLQHLDQTAGFDANNLQILVLDEADRIMDMGFQSAVDALVEHLPKSRQTLMFSATQSKKV 243
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWN 169
+L++ L++P V V + S + Q S TPL L+ ++
Sbjct: 244 SDLARLSLKDPEYVSVHEAAASATPTTLQQHYIS--TPLTEKLDTLYG 289
>gi|398837943|ref|ZP_10595227.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM102]
gi|398117501|gb|EJM07252.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM102]
Length = 444
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 87/136 (63%), Gaps = 3/136 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+ PTREL+ Q++ + + LP + + + GGV + + K+ + G +LL+ TPGR
Sbjct: 77 ALILVPTRELAEQVHEAVRQYAENLP-LSTYAVYGGVSINPQMMKLRK-GVDLLVATPGR 134
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D+ R + L F L+ LVLDEADR+LD+GF +++ I LPK R+T LFSAT ++A+
Sbjct: 135 LLDLF-RQNALKFNQLQTLVLDEADRMLDLGFSEELGNIYKALPKKRQTLLFSATFSDAI 193
Query: 122 EELSKAGLRNPVRVEV 137
L+ L +P+ +EV
Sbjct: 194 RTLAGQMLNDPLSIEV 209
>gi|326793753|ref|YP_004311573.1| DEAD/DEAH box helicase [Marinomonas mediterranea MMB-1]
gi|326544517|gb|ADZ89737.1| DEAD/DEAH box helicase domain protein [Marinomonas mediterranea
MMB-1]
Length = 425
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 92/136 (67%), Gaps = 3/136 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++++PTREL++Q++ A + LP +++ ++ GGV++ + K+ G ++L+ TPGR
Sbjct: 76 ALVLTPTRELAAQVHENAAAYSQNLP-LRAEVVFGGVKINPQMMKLRR-GVDVLVATPGR 133
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D+ + + + F+ LEILVLDEADR+LDMGF I I+ LPK R+T LFSAT ++ +
Sbjct: 134 LLDLFSQ-NAISFKQLEILVLDEADRMLDMGFIHDIKRILKLLPKERQTLLFSATFSDDI 192
Query: 122 EELSKAGLRNPVRVEV 137
EL++ +++ V V V
Sbjct: 193 RELAQNVVKDAVEVSV 208
>gi|156386665|ref|XP_001634032.1| predicted protein [Nematostella vectensis]
gi|156221110|gb|EDO41969.1| predicted protein [Nematostella vectensis]
Length = 643
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 102/175 (58%), Gaps = 7/175 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++ISPTREL+ Q + V I D+ + L++GG ++K + K+I + N+++ TPGR
Sbjct: 125 ALVISPTRELAYQTFEVLVK-IGNKHDLSAGLIIGGKDLKNEQKRIMK--TNIVVCTPGR 181
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ D +L+ILVLDEADR+LDMGF ++ II LP R+T L+SATQT +V
Sbjct: 182 LLQHMDETPNFDCTSLQILVLDEADRILDMGFAPTLNAIIENLPSERQTLLYSATQTRSV 241
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
++L++ L+ P + +S + + +Q + P L+ + +RNH
Sbjct: 242 KDLARLSLQEPTYISAHEKSDTSTPNRLTQSYVVCELPDKLNFLFSF----IRNH 292
>gi|331219074|ref|XP_003322214.1| hypothetical protein PGTG_03751 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309301204|gb|EFP77795.1| hypothetical protein PGTG_03751 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 785
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 87/135 (64%), Gaps = 2/135 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
MI++PTREL+ Q++ V + ++ D+ L VGG++++ ++ E ++IGTPGR+
Sbjct: 323 MILTPTRELAVQVFQVGK-LLARFTDLTFSLCVGGMDLRTQEAELRER-PEIVIGTPGRV 380
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D + LEILV+DEADR+L+ GFQ ++ IIS P+ R+T LFSAT E+V
Sbjct: 381 IDHIRNTRGFSLETLEILVIDEADRILEEGFQDELEEIISNCPRSRQTMLFSATVNESVA 440
Query: 123 ELSKAGLRNPVRVEV 137
+L+K L P+R+++
Sbjct: 441 DLAKLSLDKPIRIKI 455
>gi|398905221|ref|ZP_10652677.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM50]
gi|398174731|gb|EJM62517.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM50]
Length = 444
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 87/136 (63%), Gaps = 3/136 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+ PTREL+ Q++ + + LP + + + GGV + + K+ + G +LL+ TPGR
Sbjct: 77 ALILVPTRELAEQVHEAVRQYAENLP-LSTYAVYGGVSINPQMMKLRK-GVDLLVATPGR 134
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D+ R + L F L+ LVLDEADR+LD+GF +++ I LPK R+T LFSAT ++A+
Sbjct: 135 LLDLF-RQNALKFNQLQTLVLDEADRMLDLGFSEELGNIYKALPKKRQTLLFSATFSDAI 193
Query: 122 EELSKAGLRNPVRVEV 137
L+ L +P+ +EV
Sbjct: 194 RTLAGQMLNDPLSIEV 209
>gi|398996127|ref|ZP_10698989.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM21]
gi|398127663|gb|EJM17069.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM21]
Length = 445
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 87/136 (63%), Gaps = 3/136 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I+ PTREL+ Q++ + + LP + + + GGV + + K+ + G +LL+ TPGR
Sbjct: 77 ALILVPTRELAEQVHEAVRQYAENLP-LSTYAVYGGVSINPQMMKLRK-GVDLLVATPGR 134
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D+ R + L F L+ LVLDEADR+LD+GF +++ I LPK R+T LFSAT ++A+
Sbjct: 135 LLDLF-RQNALKFNQLQTLVLDEADRMLDLGFSEELGNIYKALPKKRQTLLFSATFSDAI 193
Query: 122 EELSKAGLRNPVRVEV 137
L+ L +P+ +EV
Sbjct: 194 RTLAGQMLNDPLSIEV 209
>gi|417818956|ref|ZP_12465576.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HE39]
gi|423939012|ref|ZP_17732494.1| type III restriction enzyme, res subunit [Vibrio cholerae HE-40]
gi|423969805|ref|ZP_17736043.1| type III restriction enzyme, res subunit [Vibrio cholerae HE-46]
gi|340043670|gb|EGR04628.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HE39]
gi|408664342|gb|EKL35180.1| type III restriction enzyme, res subunit [Vibrio cholerae HE-40]
gi|408667076|gb|EKL37829.1| type III restriction enzyme, res subunit [Vibrio cholerae HE-46]
Length = 464
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 91/135 (67%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++QI + LP +KS ++ GGV++ ++++ + GA++L+ TPGRL
Sbjct: 77 LILTPTRELAAQIQENVMLYGRHLP-LKSAVVFGGVKINPQMQRMCK-GADILVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + + + F LEILVLDEADR+LDMGF + I I+ LP+ R+ LFSAT + +
Sbjct: 135 MDLYNQ-NAVKFDQLEILVLDEADRMLDMGFIRDIRKILKLLPEKRQNLLFSATFSTEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
EL+K + NPV + V
Sbjct: 194 ELAKGLVNNPVEISV 208
>gi|197335615|ref|YP_002156614.1| ATP-dependent RNA helicase RhlE [Vibrio fischeri MJ11]
gi|197317105|gb|ACH66552.1| putative ATP-dependent RNA helicase RhlE [Vibrio fischeri MJ11]
Length = 398
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 90/142 (63%), Gaps = 3/142 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I++PTREL+ Q+ Q + + D+ S+ + GGV+ K D K+ EG ++L+ TPGR
Sbjct: 77 ALILTPTRELAIQVEENIQQYSKHI-DITSLAMYGGVDYK-DQKQRLIEGVDVLVATPGR 134
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D M + F L+ILVLDEADR+LDMGF + I+ II RLP R+ LFSAT ++ V
Sbjct: 135 LLD-MYTQRAIHFDELDILVLDEADRMLDMGFIEDINKIIERLPLDRQNMLFSATLSDQV 193
Query: 122 EELSKAGLRNPVRVEVRAESKS 143
L+K + NP+ + + ++ S
Sbjct: 194 RYLAKTAINNPIEISISPKTTS 215
>gi|340375419|ref|XP_003386232.1| PREDICTED: ATP-dependent RNA helicase DDX18 [Amphimedon
queenslandica]
Length = 505
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 94/150 (62%), Gaps = 3/150 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTRELS Q Y V + +++ GG + +V+++E+ G NLL+ TPGRL
Sbjct: 93 IIISPTRELSLQTYGVVTELLQYHNHSHGIIM-GGANRRVEVERLEK-GVNLLVATPGRL 150
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++ ++NL+ L++DEADR+L++GF++++ II LPK R+T LFSATQT+ E
Sbjct: 151 LDHLQNTKGFVYQNLQCLIIDEADRILEIGFEEEMKQIIKILPKKRQTVLFSATQTKKTE 210
Query: 123 ELSKAGLRN-PVRVEVRAESKSHHVSASSQ 151
+L++ L+ P+ V V + + V Q
Sbjct: 211 DLARVSLKKAPLYVGVDDDKMTSTVEGLEQ 240
>gi|325106943|ref|YP_004268011.1| DEAD/DEAH box helicase [Planctomyces brasiliensis DSM 5305]
gi|324967211|gb|ADY57989.1| DEAD/DEAH box helicase domain protein [Planctomyces brasiliensis
DSM 5305]
Length = 399
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 93/140 (66%), Gaps = 3/140 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+++ PTRELS Q+ AQ IS ++ ++VGG +KA ++KIE G ++++GTPGR
Sbjct: 88 ALVLCPTRELSEQVAVEAQK-ISRFSKLEIAVVVGGRPLKAQMQKIER-GVDVVVGTPGR 145
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ D+ +R L +N+ + VLDEADR+LD+GF+ + +I+ + PK R+T L SAT V
Sbjct: 146 VIDLFKRKS-LSLKNIRLAVLDEADRMLDIGFRPDMEFILKQCPKERQTLLLSATLPSEV 204
Query: 122 EELSKAGLRNPVRVEVRAES 141
E L+ +++PVR+++ ++
Sbjct: 205 ERLANRFMKDPVRIDIEPQN 224
>gi|365982301|ref|XP_003667984.1| hypothetical protein NDAI_0A05860 [Naumovozyma dairenensis CBS 421]
gi|343766750|emb|CCD22741.1| hypothetical protein NDAI_0A05860 [Naumovozyma dairenensis CBS 421]
Length = 399
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 96/141 (68%), Gaps = 4/141 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G+I+SPTREL+ QI V + +VKS+ ++GG +K D+KKI + +++ GTPGR
Sbjct: 94 GLILSPTRELAVQINQVVGN-LGDYMNVKSMAMIGGKMMKEDLKKINKNSCHVISGTPGR 152
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLD--MGFQKQISYIISRLPKLRRTGLFSATQTE 119
+ D+++R +L+ RN++ILVLDEAD LL +GF++QI I ++LPK + + SAT +
Sbjct: 153 ILDMIKRQ-LLNVRNIQILVLDEADELLSEILGFKQQIYDIFAKLPKSCQVVVVSATMDK 211
Query: 120 AVEELSKAGLRNPVRVEVRAE 140
+ E++K + +PV++ V+ +
Sbjct: 212 NILEITKKFMNDPVKILVKQD 232
>gi|320164285|gb|EFW41184.1| ATP-dependent RNA helicase dbp4 [Capsaspora owczarzaki ATCC 30864]
Length = 963
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 92/141 (65%), Gaps = 3/141 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++I+PTREL+ QI+ V + I ++ + L++GG +V+ + ++I G N+L+ TPGR
Sbjct: 272 AIVITPTRELAFQIFEVLRK-IGARHELAAGLVIGGKDVEQEKERIN--GMNILVCTPGR 328
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ D NL++LVLDEADR+LDMGF + + I+ LP+ R+T LFSATQT++V
Sbjct: 329 LLQHMDETPNFDCSNLQMLVLDEADRILDMGFARTLDAILDFLPRSRQTLLFSATQTKSV 388
Query: 122 EELSKAGLRNPVRVEVRAESK 142
+L++ L +P V +K
Sbjct: 389 RDLARLSLTSPEYAAVHEHAK 409
>gi|24375277|ref|NP_719320.1| ATP-dependent RNA helicase RhlE [Shewanella oneidensis MR-1]
gi|24350080|gb|AAN56764.1| ATP-dependent RNA helicase RhlE [Shewanella oneidensis MR-1]
Length = 535
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 91/135 (67%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL++Q+ + + LP ++S ++ GGV + + K+ G ++L+ TPGRL
Sbjct: 77 LVLTPTRELAAQVGESVETYGKYLP-LRSAVVFGGVPINPQINKLRH-GVDVLVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D++++ + + F LEILVLDEADR+LDMGF + I I++ LP R+ +FSAT ++ +
Sbjct: 135 LDLVQQ-NAVKFNQLEILVLDEADRMLDMGFIRDIKKILALLPAKRQNLMFSATFSDEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
EL+K + +PV + V
Sbjct: 194 ELAKGLVNHPVEISV 208
>gi|365875004|ref|ZP_09414534.1| dead/deah box helicase domain protein [Elizabethkingia anophelis
Ag1]
gi|442589352|ref|ZP_21008160.1| dead/deah box helicase domain protein [Elizabethkingia anophelis
R26]
gi|365757116|gb|EHM99025.1| dead/deah box helicase domain protein [Elizabethkingia anophelis
Ag1]
gi|442560962|gb|ELR78189.1| dead/deah box helicase domain protein [Elizabethkingia anophelis
R26]
Length = 560
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 85/135 (62%), Gaps = 2/135 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL QI + + LP++K+V + GG + ++ + E+ +++GTPGR+
Sbjct: 75 LVLCPTRELCLQITKDIKNYSKYLPNIKTVAVYGGSSINDQIRSLREK-PQIIVGTPGRV 133
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D++ R LDF N+ LVLDEAD +L MGF+ + IIS P+ ++T LFSAT ++ VE
Sbjct: 134 IDLINRKS-LDFSNIHWLVLDEADEMLSMGFKDDLETIISETPETKQTFLFSATMSKEVE 192
Query: 123 ELSKAGLRNPVRVEV 137
+SK L P R+ V
Sbjct: 193 RISKNYLTKPHRISV 207
>gi|402084250|gb|EJT79268.1| ATP-dependent RNA helicase HAS1 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 615
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 95/150 (63%), Gaps = 4/150 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++SPTREL+ QI+ VA+ + + +GG +A+V+K+ + G NLLI TPGRL
Sbjct: 210 IVVSPTRELALQIFGVARNLMQFHSQTYGIC-IGGANRRAEVEKLSK-GVNLLIATPGRL 267
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++ + F+NL LV+DEADR+L++GF+ ++ II LPK R++ LFSATQT VE
Sbjct: 268 LDHLQNTPFV-FKNLRSLVIDEADRILEIGFEDEMRQIIKILPKERQSMLFSATQTTKVE 326
Query: 123 ELSKAGLR-NPVRVEVRAESKSHHVSASSQ 151
+L++ LR P+ + V E + V Q
Sbjct: 327 DLARVSLRPGPLYLNVDEEKQFSTVEGVEQ 356
>gi|423686566|ref|ZP_17661374.1| ATP-dependent RNA helicase RhlE [Vibrio fischeri SR5]
gi|371494634|gb|EHN70232.1| ATP-dependent RNA helicase RhlE [Vibrio fischeri SR5]
Length = 398
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 90/142 (63%), Gaps = 3/142 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I++PTREL+ Q+ Q + + D+ S+ + GGV+ K D K+ EG ++L+ TPGR
Sbjct: 77 ALILTPTRELAIQVEENIQQYSKHI-DITSLAMYGGVDYK-DQKQRLIEGVDVLVATPGR 134
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D M + F L+ILVLDEADR+LDMGF + I+ II RLP R+ LFSAT ++ V
Sbjct: 135 LLD-MYTQRAIHFDELDILVLDEADRMLDMGFIEDINKIIERLPLDRQNMLFSATLSDQV 193
Query: 122 EELSKAGLRNPVRVEVRAESKS 143
L+K + NP+ + + ++ S
Sbjct: 194 RYLAKTAINNPIEISISPKTTS 215
>gi|338532337|ref|YP_004665671.1| ATP-dependent RNA helicase DbpA [Myxococcus fulvus HW-1]
gi|337258433|gb|AEI64593.1| ATP-dependent RNA helicase DbpA [Myxococcus fulvus HW-1]
Length = 461
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 91/144 (63%), Gaps = 2/144 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL +Q+ + LP ++ ++L GG ++ + +E+ GA+L +GTPGR+
Sbjct: 73 LVLCPTRELCAQVAGEIRRLGRRLPGLQVLVLAGGQPIRPQLDALEK-GAHLAVGTPGRV 131
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+++R + L+ R L +VLDEADR+LDMGF++ + I+ +P R+T LFSAT +E
Sbjct: 132 LDVLDR-EALETRQLSTVVLDEADRMLDMGFREDMERILGVMPPRRQTVLFSATFPPDIE 190
Query: 123 ELSKAGLRNPVRVEVRAESKSHHV 146
LS+ R PVRV V A + +
Sbjct: 191 ALSRDFQRQPVRVTVEAATAGPDI 214
>gi|229522888|ref|ZP_04412302.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae TM 11079-80]
gi|419837028|ref|ZP_14360468.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-46B1]
gi|421343710|ref|ZP_15794114.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-43B1]
gi|423736517|ref|ZP_17709659.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-41B1]
gi|424010835|ref|ZP_17753728.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-44C1]
gi|229340105|gb|EEO05113.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae TM 11079-80]
gi|395942277|gb|EJH52954.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HC-43B1]
gi|408626743|gb|EKK99580.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-41B1]
gi|408857578|gb|EKL97266.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-46B1]
gi|408860728|gb|EKM00346.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-44C1]
Length = 464
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 91/135 (67%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++QI + LP +KS ++ GGV++ ++++ + GA++L+ TPGRL
Sbjct: 77 LILTPTRELAAQIQDNVMLYGRHLP-LKSAVVFGGVKINPQMQRMCK-GADILVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + + + F LEILVLDEADR+LDMGF + I I+ LP+ R+ LFSAT + +
Sbjct: 135 MDLYNQ-NAVKFDQLEILVLDEADRMLDMGFIRDIRKILKLLPEKRQNLLFSATFSTEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
EL+K + NPV + V
Sbjct: 194 ELAKGLVNNPVEISV 208
>gi|242051919|ref|XP_002455105.1| hypothetical protein SORBIDRAFT_03g004420 [Sorghum bicolor]
gi|241927080|gb|EES00225.1| hypothetical protein SORBIDRAFT_03g004420 [Sorghum bicolor]
Length = 673
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 63/178 (35%), Positives = 107/178 (60%), Gaps = 14/178 (7%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++SPTREL++QI A F + + S L GG ++++E GA++++ TPGRL
Sbjct: 233 LVLSPTRELATQIQDEAIKFGRS-SRISSTCLYGGAPKGPQLRELER-GADVVVATPGRL 290
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
DI+E M+ + R + LVLDEADR+LDMGF+ QI I+ ++P R+T +++AT + V
Sbjct: 291 NDILE-MNKVSLRQVSYLVLDEADRMLDMGFEPQIRKIVKQIPPRRQTLMYTATWPKEVR 349
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNHHNLL 180
++ L NPV+V + ++ QL ++K+ + H+EVI ++ + R +L
Sbjct: 350 RIASDLLNNPVQVNI----------GNTDQLVANKS-ITQHVEVIPHMEKSRRLDQIL 396
>gi|219128317|ref|XP_002184362.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404163|gb|EEC44111.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 474
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 97/160 (60%), Gaps = 11/160 (6%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++SPTREL+ QI + + +P++ ++VGG DV ++ + ++I TPGRL
Sbjct: 61 LVLSPTRELAQQIAEQTRLLTAHMPNMSHQVMVGGTPKPKDVSAMKRKVPTIIIATPGRL 120
Query: 63 YDIMERMDVLD------FRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
D +E V + FR L++LVLDE DRLLDMGF+++I II LP+ ++T LFSAT
Sbjct: 121 QDHLESTVVHNTPFKDLFRELDVLVLDETDRLLDMGFRREIDKIIKYLPRNKQTLLFSAT 180
Query: 117 QTEAVEELSKAGLRNP-VRVEV----RAESKSHHVSASSQ 151
E V+ + + +R+P + V+ +AES SH + SQ
Sbjct: 181 IPEDVKHVIRQTMRDPYITVDCIHDDQAESSSHTNAQVSQ 220
>gi|344231947|gb|EGV63826.1| DEAD-domain-containing protein [Candida tenuis ATCC 10573]
Length = 552
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 95/142 (66%), Gaps = 4/142 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++ISPTREL+ QI+ VA+ ++ ++ +GG + + +K+++ G NLLI TPGRL
Sbjct: 164 VVISPTRELALQIFGVARELLAHHTQTFGIV-IGGANRRQEAEKLQK-GVNLLIATPGRL 221
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPK-LRRTGLFSATQTEAV 121
D ++ + FRNL L++DEADR+L++GF+ ++ II LPK R+T LFSATQT V
Sbjct: 222 LDHLQNTEGFVFRNLRALIIDEADRILEIGFEDEMKQIIKILPKEERQTMLFSATQTTKV 281
Query: 122 EELSKAGLR-NPVRVEVRAESK 142
E+L++ LR P+ + V E++
Sbjct: 282 EDLARISLRPGPLYINVVPETE 303
>gi|226330865|ref|ZP_03806383.1| hypothetical protein PROPEN_04786 [Proteus penneri ATCC 35198]
gi|225201660|gb|EEG84014.1| DEAD/DEAH box helicase [Proteus penneri ATCC 35198]
Length = 475
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 90/135 (66%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++QI + + +P ++S+++ GGV + + K+ G ++LI TPGRL
Sbjct: 80 LILTPTRELAAQIAENVKAYSRYIP-IRSLVVFGGVSINPQMMKLRG-GVDVLIATPGRL 137
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D +E + +D +E+LVLDEADR+LDMGF I +I++LPK R+ LFSAT ++ +
Sbjct: 138 LD-LEHQNAVDLSRVEVLVLDEADRMLDMGFIHDIRRVINKLPKKRQNLLFSATFSKEIT 196
Query: 123 ELSKAGLRNPVRVEV 137
L+ + L NPV + V
Sbjct: 197 GLANSLLNNPVSISV 211
>gi|393244370|gb|EJD51882.1| DEAD-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 775
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 91/137 (66%), Gaps = 3/137 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++ISPTREL+ QI+ V + I + L++GG +K + ++ N+L+ TPGR
Sbjct: 125 ALVISPTRELAMQIFEVLRA-IGGYHSFSAGLVIGGKNLKDERDRLAR--MNILVATPGR 181
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M++ + NL++LVLDEADR+LDMGF K ++ I++ LPK R+T LFSATQT +V
Sbjct: 182 LLQHMDQTVGFEGDNLQMLVLDEADRILDMGFTKSLNAIVAHLPKSRQTLLFSATQTTSV 241
Query: 122 EELSKAGLRNPVRVEVR 138
++L++ L++P V V+
Sbjct: 242 KDLARLSLKDPEYVGVQ 258
>gi|86134655|ref|ZP_01053237.1| DEAD/DEAH box helicase [Polaribacter sp. MED152]
gi|85821518|gb|EAQ42665.1| DEAD/DEAH box helicase [Polaribacter sp. MED152]
Length = 438
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 108/174 (62%), Gaps = 5/174 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++++PTREL++Q++ + + S ++KS ++ GGV+ + + ++ G ++L+ TPGR
Sbjct: 76 ALVLTPTRELAAQVHDNVREY-SKYVNIKSAVVFGGVKAASQIATLKR-GVDILVATPGR 133
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D+ ++ V F+ +++ +LDEADR+LDMGF + I+ IIS +P R+ +FSAT ++ +
Sbjct: 134 LLDLHDQKAV-SFKRIDVFILDEADRMLDMGFVRDINKIISYMPAKRQNLMFSATFSKEI 192
Query: 122 EELSKAGLRNPVRVEVRAE-SKSHHVSASSQQL-ASSKTPLGLHLEVIWNVNQM 173
++L+ L+NPV VE + S + VS Q+ KT + L N NQ+
Sbjct: 193 KKLASGILKNPVEVETAPQNSTAKKVSHKVYQIDKKKKTEFTIKLIKDNNWNQV 246
>gi|444317493|ref|XP_004179404.1| hypothetical protein TBLA_0C00690 [Tetrapisispora blattae CBS 6284]
gi|387512445|emb|CCH59885.1| hypothetical protein TBLA_0C00690 [Tetrapisispora blattae CBS 6284]
Length = 604
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 87/144 (60%), Gaps = 7/144 (4%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPD----VKSVLLVGG--VEVKADVKKIEEEGANLLI 56
+II+PTRELS QI V F+ P+ ++S LLVG V+ DV + ++ +L+
Sbjct: 87 LIIAPTRELSKQIQAVIDSFLDHYPEGLYPIRSKLLVGTNTRTVRDDVAQFLDDRPQILV 146
Query: 57 GTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
GTPGR+ D + V + +++LDEADRLLD F + I+ LPK RRTGLFSAT
Sbjct: 147 GTPGRILDFLGNPTV-KTSSCSMVILDEADRLLDGSFLGDVENILGILPKQRRTGLFSAT 205
Query: 117 QTEAVEELSKAGLRNPVRVEVRAE 140
A E + K GLRNP+++ V ++
Sbjct: 206 INSAGENIFKTGLRNPIKITVNSK 229
>gi|422923013|ref|ZP_16956180.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae BJG-01]
gi|341644564|gb|EGS68762.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae BJG-01]
Length = 464
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 91/135 (67%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++QI + LP +KS ++ GGV++ ++++ + GA++L+ TPGRL
Sbjct: 77 LILTPTRELAAQIQDNVMLYGRHLP-LKSAVVFGGVKINPQMQRMCK-GADILVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + + + F LEILVLDEADR+LDMGF + I I+ LP+ R+ LFSAT + +
Sbjct: 135 MDLYNQ-NAVKFDQLEILVLDEADRMLDMGFIRDIRKILKLLPEKRQNLLFSATFSTEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
EL+K + NPV + V
Sbjct: 194 ELAKGLVNNPVEISV 208
>gi|268574850|ref|XP_002642404.1| Hypothetical protein CBG06798 [Caenorhabditis briggsae]
gi|74846896|sp|Q61R02.1|DDX55_CAEBR RecName: Full=Probable ATP-dependent RNA helicase DDX55 homolog;
AltName: Full=DEAD box protein 55
Length = 577
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 93/146 (63%), Gaps = 6/146 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLP-DVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+I+SP+REL SQI +V +PF + +V++V GG +V ++K + + N+L+ TPG
Sbjct: 83 ALILSPSRELCSQIVNVIKPFAEKMKLNVETV--TGGQKVDKNIKMFKNKDINILVATPG 140
Query: 61 RLYDIMER---MDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQ 117
RL+ I++ M + +++LV+DEADR ++ F+ + I+S +PK RRTGLFSATQ
Sbjct: 141 RLFQIIQHEKTMIARAMKGVQLLVIDEADRFNEIQFEDHMREILSCIPKQRRTGLFSATQ 200
Query: 118 TEAVEELSKAGLRNPVRVEVRAESKS 143
+ ++L GLRN +V+V E S
Sbjct: 201 VKEEDDLMVFGLRNAKQVKVSQERNS 226
>gi|153825002|ref|ZP_01977669.1| putative ATP-dependent RNA helicase RhlE [Vibrio cholerae MZO-2]
gi|149741327|gb|EDM55361.1| putative ATP-dependent RNA helicase RhlE [Vibrio cholerae MZO-2]
Length = 464
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 91/135 (67%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++QI + LP +KS ++ GGV++ ++++ + GA++L+ TPGRL
Sbjct: 77 LILTPTRELAAQIQDNVMLYGRHLP-LKSAVVFGGVKINPQMQRMCK-GADILVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + + + F LEILVLDEADR+LDMGF + I I+ LP+ R+ LFSAT + +
Sbjct: 135 MDLYNQ-NAVKFDQLEILVLDEADRMLDMGFIRDIRKILKLLPEKRQNLLFSATFSTEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
EL+K + NPV + V
Sbjct: 194 ELAKGLVNNPVEISV 208
>gi|153829646|ref|ZP_01982313.1| putative ATP-dependent RNA helicase RhlE [Vibrio cholerae 623-39]
gi|148874874|gb|EDL73009.1| putative ATP-dependent RNA helicase RhlE [Vibrio cholerae 623-39]
Length = 464
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 91/135 (67%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++QI + LP +KS ++ GGV++ ++++ + GA++L+ TPGRL
Sbjct: 77 LILTPTRELAAQIQDNVMLYGRHLP-LKSAVVFGGVKINPQMQRMCK-GADILVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + + + F LEILVLDEADR+LDMGF + I I+ LP+ R+ LFSAT + +
Sbjct: 135 MDLYNQ-NAVKFDQLEILVLDEADRMLDMGFIRDIRKILKLLPEKRQNLLFSATFSTEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
EL+K + NPV + V
Sbjct: 194 ELAKGLVNNPVEISV 208
>gi|330915742|ref|XP_003297149.1| hypothetical protein PTT_07463 [Pyrenophora teres f. teres 0-1]
gi|311330325|gb|EFQ94748.1| hypothetical protein PTT_07463 [Pyrenophora teres f. teres 0-1]
Length = 805
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 94/150 (62%), Gaps = 4/150 (2%)
Query: 4 IISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLY 63
I PTREL+ Q ++VA +++ D+ L+ GG + D + + + +++I TPGR
Sbjct: 351 IFMPTRELAVQCFNVATK-LASFTDITFALMAGGFSTR-DQEAVLKTRPDVVIATPGRFI 408
Query: 64 DIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVEE 123
D M +LEILVLDEADR+L+ GF+ Q++ I++ +PK R+T LFSAT T +V++
Sbjct: 409 DHMHNTAAFQVEHLEILVLDEADRMLEEGFESQLNEILTTIPKSRQTMLFSATMTSSVDK 468
Query: 124 LSKAGLRNPVRVEVRAESKSHHVSASSQQL 153
L + G+ PVR+ V ++K H V+ +Q+
Sbjct: 469 LIRIGMDKPVRLMV--DAKKHTVAGLTQEF 496
>gi|424591126|ref|ZP_18030559.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae CP1037(10)]
gi|408032992|gb|EKG69556.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae CP1037(10)]
Length = 464
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 91/135 (67%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++QI + LP +KS ++ GGV++ ++++ + GA++L+ TPGRL
Sbjct: 77 LILTPTRELAAQIQDNVMLYGRHLP-LKSAVVFGGVKINPQMQRMCK-GADILVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + + + F LEILVLDEADR+LDMGF + I I+ LP+ R+ LFSAT + +
Sbjct: 135 MDLYNQ-NAVKFDQLEILVLDEADRMLDMGFIRDIRKILKLLPEKRQNLLFSATFSTEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
EL+K + NPV + V
Sbjct: 194 ELAKGLVNNPVEISV 208
>gi|399020612|ref|ZP_10722739.1| DNA/RNA helicase, superfamily II [Herbaspirillum sp. CF444]
gi|398094379|gb|EJL84742.1| DNA/RNA helicase, superfamily II [Herbaspirillum sp. CF444]
Length = 466
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 93/135 (68%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++Q+ + + LP + S + GGV + ++++++ G ++L+ TPGRL
Sbjct: 80 LILTPTRELAAQVEESVRLYGKYLP-LTSACIFGGVGINPQIRQLKQ-GVDILVATPGRL 137
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D M++ + +D RN+++L+LDEADR+LDMGF + I I++ LPK R+ LFSAT ++ ++
Sbjct: 138 LDHMQQ-NTVDLRNIQVLILDEADRMLDMGFIRDIKKILAILPKKRQNLLFSATFSDEIK 196
Query: 123 ELSKAGLRNPVRVEV 137
L+ L +P +EV
Sbjct: 197 ALADGLLNSPAMIEV 211
>gi|229526174|ref|ZP_04415578.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae bv. albensis
VL426]
gi|229336332|gb|EEO01350.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae bv. albensis
VL426]
Length = 464
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 91/135 (67%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++QI + LP +KS ++ GGV++ ++++ + GA++L+ TPGRL
Sbjct: 77 LILTPTRELAAQIQDNVMLYGRHLP-LKSAVVFGGVKINPQMQRMCK-GADILVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + + + F LEILVLDEADR+LDMGF + I I+ LP+ R+ LFSAT + +
Sbjct: 135 MDLYNQ-NAVKFDQLEILVLDEADRMLDMGFIRDIRKILKLLPEKRQNLLFSATFSTEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
EL+K + NPV + V
Sbjct: 194 ELAKGLVNNPVEISV 208
>gi|153801601|ref|ZP_01956187.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae MZO-3]
gi|124122857|gb|EAY41600.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae MZO-3]
Length = 464
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 91/135 (67%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++QI + LP +KS ++ GGV++ ++++ + GA++L+ TPGRL
Sbjct: 77 LILTPTRELAAQIQDNVMLYGRHLP-LKSAVVFGGVKINPQMQRMCK-GADILVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + + + F LEILVLDEADR+LDMGF + I I+ LP+ R+ LFSAT + +
Sbjct: 135 MDLYNQ-NAVKFDQLEILVLDEADRMLDMGFIRDIRKILKLLPEKRQNLLFSATFSTEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
EL+K + NPV + V
Sbjct: 194 ELAKGLVNNPVEISV 208
>gi|254225215|ref|ZP_04918828.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae V51]
gi|125622314|gb|EAZ50635.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae V51]
Length = 464
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 91/135 (67%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++QI + LP +KS ++ GGV++ ++++ + GA++L+ TPGRL
Sbjct: 77 LILTPTRELAAQIQDNVMLYGRHLP-LKSAVVFGGVKINPQMQRMCK-GADILVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + + + F LEILVLDEADR+LDMGF + I I+ LP+ R+ LFSAT + +
Sbjct: 135 MDLYNQ-NAVKFDQLEILVLDEADRMLDMGFIRDIRKILKLLPEKRQNLLFSATFSTEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
EL+K + NPV + V
Sbjct: 194 ELAKGLVNNPVEISV 208
>gi|392307361|ref|ZP_10269895.1| ATP-dependent RNA helicase [Pseudoalteromonas citrea NCIMB 1889]
Length = 422
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 93/138 (67%), Gaps = 3/138 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL++Q+ + + S + ++ S + GGV ++ + ++ G ++L+ TPGR
Sbjct: 76 ALIIAPTRELAAQVAKSVENYSSHM-NLSSAAVFGGVRIEPQIAALQT-GLDILVATPGR 133
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D+ + + ++F LE+LVLDEADR+LD+GF + I++I S LPK R+T +FSAT +E +
Sbjct: 134 LLDLYNQ-NAINFAQLEVLVLDEADRMLDLGFIEDITHIASLLPKKRQTLMFSATFSEEI 192
Query: 122 EELSKAGLRNPVRVEVRA 139
+ L+ L +P +EV A
Sbjct: 193 KTLASGMLNHPQLIEVTA 210
>gi|330448478|ref|ZP_08312126.1| DEAD-box-containing ATP-dependent RNA helicase family member
[Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328492669|dbj|GAA06623.1| DEAD-box-containing ATP-dependent RNA helicase family member
[Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 494
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 96/142 (67%), Gaps = 3/142 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++++PTREL++Q+ + L + S ++ GGV+V + ++ + GA++L+ TPGR
Sbjct: 76 ALVLTPTRELAAQVGESVATYGKNL-RISSAVVFGGVKVNPQMLRMRK-GADVLVATPGR 133
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D+ + + + FR++EILVLDEADR+LDMGF + I I++ LPK R+ LFSAT ++ +
Sbjct: 134 LMDLHSQ-NAVKFRDIEILVLDEADRMLDMGFIRDIRKILALLPKERQNLLFSATFSDEI 192
Query: 122 EELSKAGLRNPVRVEVRAESKS 143
EL+K + +PV ++V +++
Sbjct: 193 RELAKGLVNDPVEIDVNPRNQT 214
>gi|308809810|ref|XP_003082214.1| MGC81303 protein (ISS) [Ostreococcus tauri]
gi|116060682|emb|CAL57160.1| MGC81303 protein (ISS), partial [Ostreococcus tauri]
Length = 382
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 92/138 (66%), Gaps = 2/138 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+SPTREL+ QI + + V++ LVGG+E+ + + + ++++GTPGR+
Sbjct: 91 LILSPTRELAIQIAEQVEALGRGI-GVRTATLVGGIEMTSQAIMLGKR-PHVVVGTPGRV 148
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D +E + L++LVLDEADRLL++ F+++I I+ +P+ RRT LFSAT T V+
Sbjct: 149 VDHLENTKGFGLKALKVLVLDEADRLLNLDFEEEIDKILRVIPQDRRTQLFSATMTSKVQ 208
Query: 123 ELSKAGLRNPVRVEVRAE 140
+L +A LR+PV+VEV A+
Sbjct: 209 KLQRACLRDPVKVEVSAK 226
>gi|449484603|ref|XP_002197738.2| PREDICTED: probable ATP-dependent RNA helicase DDX10 [Taeniopygia
guttata]
Length = 824
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+IISPTREL+ Q + V + + + + L++GG ++K + ++I N+LI TPGRL
Sbjct: 94 LIISPTRELAYQTFKVLRK-VGKNHEFSAGLIIGGKDLKEESERIHH--INMLICTPGRL 150
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
M+ +L++L+LDEADR+LDMGF ++ II LPK R+T LFSATQT++V+
Sbjct: 151 LQHMDETSYFYASDLQMLILDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVK 210
Query: 123 ELSKAGLRNPVRVEVRAESK 142
+L++ L++P V V ++K
Sbjct: 211 DLARLSLKDPEYVWVHEKAK 230
>gi|404401073|ref|ZP_10992657.1| ATP-dependent RNA helicase [Pseudomonas fuscovaginae UPB0736]
Length = 445
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 93/148 (62%), Gaps = 7/148 (4%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+ PTREL+ Q++ + + LP + + + GGV + + K+ G ++L+ TPGRL
Sbjct: 78 LILVPTRELAEQVHESVRQYAEHLP-LSTYAVYGGVSINPQMMKLRR-GVDVLVATPGRL 135
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ R + L F L+ LVLDEADR+LD+GFQ+++ I LPK R+T LFSAT ++A+
Sbjct: 136 LDLF-RQNALKFNQLQTLVLDEADRMLDLGFQEELGNIYRALPKKRQTLLFSATFSDAIR 194
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASS 150
L+ L NP+ +EV +V+AS+
Sbjct: 195 LLAGQTLDNPLSIEV----SPRNVAAST 218
>gi|297579675|ref|ZP_06941602.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae RC385]
gi|297535321|gb|EFH74155.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae RC385]
Length = 464
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 91/135 (67%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++QI + LP +KS ++ GGV++ ++++ + GA++L+ TPGRL
Sbjct: 77 LILTPTRELAAQIQDNVMLYGRHLP-LKSAVVFGGVKINPQMQRMCK-GADILVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + + + F LEILVLDEADR+LDMGF + I I+ LP+ R+ LFSAT + +
Sbjct: 135 MDLYNQ-NAVKFDQLEILVLDEADRMLDMGFIRDIRKILKLLPEKRQNLLFSATFSTEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
EL+K + NPV + V
Sbjct: 194 ELAKGLVNNPVEISV 208
>gi|422307647|ref|ZP_16394803.1| type III restriction enzyme, res subunit [Vibrio cholerae
CP1035(8)]
gi|408619161|gb|EKK92199.1| type III restriction enzyme, res subunit [Vibrio cholerae
CP1035(8)]
Length = 464
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 91/135 (67%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++QI + LP +KS ++ GGV++ ++++ + GA++L+ TPGRL
Sbjct: 77 LILTPTRELAAQIQDNVMLYGRHLP-LKSAVVFGGVKINPQMQRMCK-GADILVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + + + F LEILVLDEADR+LDMGF + I I+ LP+ R+ LFSAT + +
Sbjct: 135 MDLYNQ-NAVKFDQLEILVLDEADRMLDMGFIRDIRKILKLLPEKRQNLLFSATFSTEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
EL+K + NPV + V
Sbjct: 194 ELAKGLVNNPVEISV 208
>gi|384484503|gb|EIE76683.1| hypothetical protein RO3G_01387 [Rhizopus delemar RA 99-880]
Length = 686
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 95/159 (59%), Gaps = 11/159 (6%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ V + I + L++GG E K + ++I N+L+ TPGR
Sbjct: 54 ALIISPTRELAVQIFEVLKK-IGKYHTFSAGLIIGGKEFKVEQERISR--MNILVSTPGR 110
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M++ L+ LVLDEADR++DMGFQ ++ II LP R+T +FSATQT +V
Sbjct: 111 LLQHMDQSVGFVCDQLQCLVLDEADRIMDMGFQNTMNAIIENLPNHRQTLMFSATQTRSV 170
Query: 122 EELSKAGLRNP--VRVEVRAESKS------HHVSASSQQ 152
++L++ L++P V V RAE + H V+A Q
Sbjct: 171 KDLARLSLKDPEYVAVHERAEHSTPKTLSQHFVTAELHQ 209
>gi|262192111|ref|ZP_06050273.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae CT 5369-93]
gi|262032022|gb|EEY50598.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae CT 5369-93]
Length = 464
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 91/135 (67%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++QI + LP +KS ++ GGV++ ++++ + GA++L+ TPGRL
Sbjct: 77 LILTPTRELAAQIQDNVMLYGRHLP-LKSAVVFGGVKINPQMQRMCK-GADILVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + + + F LEILVLDEADR+LDMGF + I I+ LP+ R+ LFSAT + +
Sbjct: 135 MDLYNQ-NAVKFDQLEILVLDEADRMLDMGFIRDIRKILKLLPEKRQNLLFSATFSTEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
EL+K + NPV + V
Sbjct: 194 ELAKGLVNNPVEISV 208
>gi|229527823|ref|ZP_04417214.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae 12129(1)]
gi|229334185|gb|EEN99670.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae 12129(1)]
Length = 464
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 91/135 (67%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++QI + LP +KS ++ GGV++ ++++ + GA++L+ TPGRL
Sbjct: 77 LILTPTRELAAQIQDNVMLYGRHLP-LKSAVVFGGVKINPQMQRMCK-GADILVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + + + F LEILVLDEADR+LDMGF + I I+ LP+ R+ LFSAT + +
Sbjct: 135 MDLYNQ-NAVKFDQLEILVLDEADRMLDMGFIRDIRKILKLLPEKRQNLLFSATFSTEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
EL+K + NPV + V
Sbjct: 194 ELAKGLVNNPVEISV 208
>gi|145352866|ref|XP_001420755.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580990|gb|ABO99048.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 466
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 90/138 (65%), Gaps = 2/138 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+SPTREL+ QI + + + ++ LVGGV++ K+ + ++++GTPGR+
Sbjct: 90 LILSPTRELAMQIAEQIETLGAGV-GARTATLVGGVDMTTQAIKLGKR-PHVIVGTPGRV 147
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D +E R L++LVLDEADRLL++ F+++I I+ +P RRT LFSAT T V
Sbjct: 148 VDHLENTKGFSLRALKVLVLDEADRLLNLDFEEEIDKILRVIPSDRRTQLFSATMTNKVA 207
Query: 123 ELSKAGLRNPVRVEVRAE 140
+L +A LR+PV+VEV A+
Sbjct: 208 KLQRACLRDPVKVEVSAK 225
>gi|419828104|ref|ZP_14351595.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-1A2]
gi|419833027|ref|ZP_14356488.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-61A2]
gi|422918796|ref|ZP_16953096.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-02A1]
gi|423780048|ref|ZP_17714132.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-55C2]
gi|423840903|ref|ZP_17717879.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-59A1]
gi|423867757|ref|ZP_17721551.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-60A1]
gi|423999359|ref|ZP_17742552.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-02C1]
gi|424011378|ref|ZP_17754246.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-55B2]
gi|424021201|ref|ZP_17760971.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-59B1]
gi|424626417|ref|ZP_18064867.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-50A1]
gi|424627308|ref|ZP_18065672.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-51A1]
gi|424631108|ref|ZP_18069331.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-52A1]
gi|424638028|ref|ZP_18076025.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-55A1]
gi|424641924|ref|ZP_18079796.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-56A1]
gi|424646441|ref|ZP_18084169.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-57A1]
gi|443525237|ref|ZP_21091431.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-78A1]
gi|341634020|gb|EGS58788.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-02A1]
gi|408009585|gb|EKG47486.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-50A1]
gi|408020876|gb|EKG58157.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-56A1]
gi|408020934|gb|EKG58214.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-55A1]
gi|408028856|gb|EKG65711.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-52A1]
gi|408040724|gb|EKG76888.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-57A1]
gi|408060896|gb|EKG95498.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-51A1]
gi|408623177|gb|EKK96131.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-1A2]
gi|408638465|gb|EKL10363.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-55C2]
gi|408647380|gb|EKL18908.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-60A1]
gi|408647831|gb|EKL19284.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-59A1]
gi|408650351|gb|EKL21626.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-61A2]
gi|408849483|gb|EKL89499.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-02C1]
gi|408864773|gb|EKM04189.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-59B1]
gi|408870749|gb|EKM10017.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-55B2]
gi|443456352|gb|ELT20025.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-78A1]
Length = 467
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 91/135 (67%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++QI + LP +KS ++ GGV++ ++++ + GA++L+ TPGRL
Sbjct: 77 LILTPTRELAAQIQDNVMLYGRHLP-LKSAVVFGGVKINPQMQRMCK-GADILVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + + + F LEILVLDEADR+LDMGF + I I+ LP+ R+ LFSAT + +
Sbjct: 135 MDLYNQ-NAVKFDQLEILVLDEADRMLDMGFIRDIRKILKLLPEKRQNLLFSATFSTEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
EL+K + NPV + V
Sbjct: 194 ELAKGLVNNPVEISV 208
>gi|229514699|ref|ZP_04404160.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae TMA 21]
gi|429888348|ref|ZP_19369831.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae PS15]
gi|229348679|gb|EEO13637.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae TMA 21]
gi|429224548|gb|EKY30912.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae PS15]
Length = 464
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 91/135 (67%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++QI + LP +KS ++ GGV++ ++++ + GA++L+ TPGRL
Sbjct: 77 LILTPTRELAAQIQDNVMLYGRHLP-LKSAVVFGGVKINPQMQRMCK-GADILVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + + + F LEILVLDEADR+LDMGF + I I+ LP+ R+ LFSAT + +
Sbjct: 135 MDLYNQ-NAVKFDQLEILVLDEADRMLDMGFIRDIRKILKLLPEKRQNLLFSATFSTEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
EL+K + NPV + V
Sbjct: 194 ELAKGLVNNPVEISV 208
>gi|189208750|ref|XP_001940708.1| ATP-dependent RNA helicase DRS1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976801|gb|EDU43427.1| ATP-dependent RNA helicase DRS1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 805
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 93/150 (62%), Gaps = 4/150 (2%)
Query: 4 IISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLY 63
I PTREL+ Q ++VA +++ D+ L+ GG + D + + + +++I TPGR
Sbjct: 351 IFMPTRELAVQCFNVATK-LASFTDITFALMAGGFSTR-DQEAVLKTRPDVVIATPGRFI 408
Query: 64 DIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVEE 123
D M +LEILVLDEADR+L+ GF+ Q++ I++ +PK R+T LFSAT T +V++
Sbjct: 409 DHMHNTAAFQVEHLEILVLDEADRMLEEGFESQLNEILTTIPKSRQTMLFSATMTSSVDK 468
Query: 124 LSKAGLRNPVRVEVRAESKSHHVSASSQQL 153
L + G+ PVR+ V A K H V+ +Q+
Sbjct: 469 LIRIGMDKPVRLMVDA--KKHTVAGLTQEF 496
>gi|417822695|ref|ZP_12469293.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HE48]
gi|340048825|gb|EGR09741.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HE48]
Length = 464
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 91/135 (67%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++QI + LP +KS ++ GGV++ ++++ + GA++L+ TPGRL
Sbjct: 77 LILTPTRELAAQIQDNVMLYGRHLP-LKSAVVFGGVKINPQMQRMCK-GADILVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + + + F LEILVLDEADR+LDMGF + I I+ LP+ R+ LFSAT + +
Sbjct: 135 MDLYNQ-NAVKFDQLEILVLDEADRMLDMGFIRDIRKILKLLPEKRQNLLFSATFSTEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
EL+K + NPV + V
Sbjct: 194 ELAKGLVNNPVEISV 208
>gi|121606431|ref|YP_983760.1| ATP-dependent RNA helicase DbpA [Polaromonas naphthalenivorans CJ2]
gi|120595400|gb|ABM38839.1| ATP-dependent RNA helicase DbpA [Polaromonas naphthalenivorans CJ2]
Length = 467
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 87/139 (62%), Gaps = 2/139 (1%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
M++ PTREL+ Q+ + ++K V L GGV ++ + +E GA++++GTPGR
Sbjct: 77 AMVLCPTRELADQVTTEIRRLARAEENIKVVTLCGGVALRNQIASLEH-GAHIVVGTPGR 135
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ D + R + LD + LVLDEADR+LDMGF I+ + + PK R+T LFSAT E +
Sbjct: 136 IMDHLGRGN-LDLAAMNTLVLDEADRMLDMGFFDDIATVAKQCPKERQTLLFSATYPEGI 194
Query: 122 EELSKAGLRNPVRVEVRAE 140
++S+ ++NP V V+A+
Sbjct: 195 AKISQQFMKNPQTVTVQAQ 213
>gi|378754348|gb|EHY64382.1| hypothetical protein NERG_02553 [Nematocida sp. 1 ERTm2]
Length = 445
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 82/119 (68%), Gaps = 3/119 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++ISPTREL+ Q VAQ + PD+++VL VGG + KAD + ++G +L+ TPGRL
Sbjct: 79 LVISPTRELAMQTSRVAQRLFADHPDIRTVLFVGGTK-KADENEQLKKGCAILVCTPGRL 137
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
D ++ L + +EI VLDE+DR+LD+GF+K + I++ LPK R+T +FSAT T+ V
Sbjct: 138 LDHLK--SGLSLKKIEIAVLDESDRILDIGFEKDMCEILTYLPKKRQTLMFSATNTDNV 194
>gi|345872285|ref|ZP_08824222.1| DEAD/DEAH box helicase domain protein [Thiorhodococcus drewsii AZ1]
gi|343919163|gb|EGV29916.1| DEAD/DEAH box helicase domain protein [Thiorhodococcus drewsii AZ1]
Length = 446
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 87/135 (64%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL++Q+ + + LP ++S+ + GGV + V K+ G ++L+ TPGRL
Sbjct: 78 LVLTPTRELAAQVGESVRLYGQNLP-LRSLQIFGGVGMGPQVDKLRR-GVDILVATPGRL 135
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D + +V D +EILVLDEADR+LDMGF I I+ LPK R+ LFSAT + +E
Sbjct: 136 LDHQGQGNV-DLGGIEILVLDEADRMLDMGFIHDIRRILKSLPKQRQNLLFSATYSREIE 194
Query: 123 ELSKAGLRNPVRVEV 137
+L+ L NP R+EV
Sbjct: 195 QLATGLLSNPARIEV 209
>gi|395519421|ref|XP_003763848.1| PREDICTED: ATP-dependent RNA helicase DDX18 isoform 2 [Sarcophilus
harrisii]
Length = 665
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 93/150 (62%), Gaps = 3/150 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+SPTREL+ Q + V + +S L++GG A+ +K+ G N+++ TPGRL
Sbjct: 249 LILSPTRELAMQTFGVLKELMSYHVHTYG-LIMGGSNRSAEAQKLAN-GINIIVATPGRL 306
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D M+ F+NL+ LV+DEADR+L++GF++++ II LPK R+T LFSATQT VE
Sbjct: 307 LDHMQNTPGFMFKNLQCLVIDEADRILEVGFEEEMKQIIKLLPKRRQTMLFSATQTRKVE 366
Query: 123 ELSKAGLRN-PVRVEVRAESKSHHVSASSQ 151
+L+K L+ P+ V V + + V Q
Sbjct: 367 DLAKISLKKEPLYVGVDDDKDTATVDGLEQ 396
>gi|398412610|ref|XP_003857625.1| ATP-dependent RNA helicase HAS1 [Zymoseptoria tritici IPO323]
gi|339477510|gb|EGP92601.1| hypothetical protein MYCGRDRAFT_65342 [Zymoseptoria tritici IPO323]
Length = 638
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 96/151 (63%), Gaps = 4/151 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++SPTREL+ QI+ VA+ + ++ +GG +A+ +K+ + G NLLI TPGRL
Sbjct: 238 IVVSPTRELALQIFGVARELMENHTQTYGIV-IGGANRRAEAEKLAK-GVNLLIATPGRL 295
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKL-RRTGLFSATQTEAV 121
D ++ F+N++ LV+DEADR+L++GF+ ++ I+ LPK R+T LFSATQT V
Sbjct: 296 LDHLQNTQGFVFKNVKALVIDEADRILEVGFEDEMRQIVKILPKEDRQTMLFSATQTTKV 355
Query: 122 EELSKAGLR-NPVRVEVRAESKSHHVSASSQ 151
E+L++ LR P+ + V E + VS Q
Sbjct: 356 EDLARISLRPGPLYINVDNEEEHSTVSGLEQ 386
>gi|261212630|ref|ZP_05926914.1| ATP-dependent RNA helicase RhlE [Vibrio sp. RC341]
gi|384422710|ref|YP_005632069.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae LMA3984-4]
gi|260837695|gb|EEX64372.1| ATP-dependent RNA helicase RhlE [Vibrio sp. RC341]
gi|327485418|gb|AEA79824.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae LMA3984-4]
Length = 464
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 91/135 (67%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++QI + LP +KS ++ GGV++ ++++ + GA++L+ TPGRL
Sbjct: 77 LILTPTRELAAQIQDNVMLYGRHLP-LKSAVVFGGVKINPQMQRMCK-GADILVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + + + F LEILVLDEADR+LDMGF + I I+ LP+ R+ LFSAT + +
Sbjct: 135 MDLYNQ-NAVKFDQLEILVLDEADRMLDMGFIRDIRKILKLLPEKRQNLLFSATFSTEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
EL+K + NPV + V
Sbjct: 194 ELAKGLVNNPVEISV 208
>gi|410920772|ref|XP_003973857.1| PREDICTED: probable ATP-dependent RNA helicase DDX10-like [Takifugu
rubripes]
Length = 954
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 105/175 (60%), Gaps = 7/175 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ Q + V + + + + L++GG ++K + ++I+ N++I TPGR
Sbjct: 153 ALIISPTRELAYQTFEVLRK-VGKNHEFSAGLVIGGKDLKVESEQIQH--TNIIICTPGR 209
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M++ NL +LVLDEADR+LDMGF + ++ I+ LPK R+T LFSATQT++V
Sbjct: 210 LLQHMDQTASFHAANLHMLVLDEADRILDMGFAETLNAIVENLPKTRQTLLFSATQTKSV 269
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVIWNVNQMRNH 176
++L++ L+ P V ++K ++ L S LH +V + +RNH
Sbjct: 270 KDLARLSLKEPEYVWAHEKAK----FSTPATLEQSYVVCELHQKVNMLYSFIRNH 320
>gi|421349929|ref|ZP_15800298.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HE-25]
gi|395956546|gb|EJH67140.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HE-25]
Length = 461
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 91/135 (67%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++QI + LP +KS ++ GGV++ ++++ + GA++L+ TPGRL
Sbjct: 77 LILTPTRELAAQIQDNVMLYGRHLP-LKSAVVFGGVKINPQMQRMCK-GADILVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + + + F LEILVLDEADR+LDMGF + I I+ LP+ R+ LFSAT + +
Sbjct: 135 MDLYNQ-NAVKFDQLEILVLDEADRMLDMGFIRDIRKILKLLPEKRQNLLFSATFSTEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
EL+K + NPV + V
Sbjct: 194 ELAKGLVNNPVEISV 208
>gi|262275389|ref|ZP_06053199.1| ATP-dependent RNA helicase RhlE [Grimontia hollisae CIP 101886]
gi|262220634|gb|EEY71949.1| ATP-dependent RNA helicase RhlE [Grimontia hollisae CIP 101886]
Length = 436
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 92/135 (68%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++QI+ A + LP ++S ++ GGV++ + + + G ++L+ TPGRL
Sbjct: 77 LILTPTRELAAQIHENAVVYSRHLP-LRSSVVFGGVKINPQMMALRK-GTDILVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ ++ + + F LE+LVLDEADR+LDMGF + I I+ LPK R++ LFSAT ++ +
Sbjct: 135 LDLYQQ-NAVKFSQLEVLVLDEADRMLDMGFFRDIKKILDLLPKNRQSLLFSATFSDEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
L+K + NPV + V
Sbjct: 194 NLAKGLVNNPVEISV 208
>gi|238021260|ref|ZP_04601686.1| hypothetical protein GCWU000324_01158 [Kingella oralis ATCC 51147]
gi|237868240|gb|EEP69246.1| hypothetical protein GCWU000324_01158 [Kingella oralis ATCC 51147]
Length = 449
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 91/142 (64%), Gaps = 3/142 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+ Q+ AQ + + V++V LVGG +K + ++++ TPGRL
Sbjct: 79 LVLTPTRELAQQVEKNAQLYAQNMKWVRTVTLVGGSSFGQQIKALSRP-IDIVVATPGRL 137
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D M R +DF LE+LVLDEADR+LDMGF I I++ +P+ R+T LFSAT AV
Sbjct: 138 MDHM-RSGRIDFDRLEVLVLDEADRMLDMGFIDDIETIVAAMPESRQTLLFSATWDGAVG 196
Query: 123 ELSKAGLRNPVRVEV-RAESKS 143
+L++ +NP +E+ RAE++
Sbjct: 197 KLARKLTKNPEVIEIERAEAQG 218
>gi|254481835|ref|ZP_05095078.1| DEAD/DEAH box helicase domain protein [marine gamma proteobacterium
HTCC2148]
gi|214037964|gb|EEB78628.1| DEAD/DEAH box helicase domain protein [marine gamma proteobacterium
HTCC2148]
Length = 435
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 88/135 (65%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++Q+ + P +KS ++ GGV++ + + ++ G ++LI TPGRL
Sbjct: 77 LILTPTRELAAQVAQSVSTYGLHTP-LKSAVVFGGVKINSQIAQLRR-GVDILIATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + +V DF LEILVLDEADR+LDMGF I I+ LP R+ LFSAT +
Sbjct: 135 LDLHGQGEV-DFGELEILVLDEADRMLDMGFIHDIRRILKLLPAERQNLLFSATFAAEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
EL+K L++P+ VEV
Sbjct: 194 ELTKKFLQDPIEVEV 208
>gi|388456988|ref|ZP_10139283.1| ATP-dependent RNA helicase DbpA [Fluoribacter dumoffii Tex-KL]
Length = 468
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 95/158 (60%), Gaps = 9/158 (5%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G+++ PTREL+ Q+ V + + +VK + L GG+ +K + + GA++++GTPGR
Sbjct: 82 GLVLCPTRELAEQVSQVIRRLACLISNVKIINLSGGIPMKPQIDSLRH-GAHIIVGTPGR 140
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ ++ L+ ++ LVLDEADR+LDMGF I IIS PK R+T LFSAT +E +
Sbjct: 141 VLKHLKNAS-LELSQVKTLVLDEADRMLDMGFIDDIKNIISLCPKQRQTLLFSATYSEEI 199
Query: 122 EELSKAGLRNPVRV-------EVRAESKSHHVSASSQQ 152
++LSK +++P V E+ E + VS +Q+
Sbjct: 200 KQLSKQFMKDPKEVHVETPPEEIDIEQHFYEVSKQAQK 237
>gi|340777917|ref|ZP_08697860.1| DEAD/DEAH box helicase domain-containing protein [Acetobacter aceti
NBRC 14818]
Length = 432
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 91/141 (64%), Gaps = 3/141 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL+SQI + + + +V+ GGV V+ + G ++L+ PGRL
Sbjct: 79 LVLAPTRELASQIDDSFKSYARHMKLTHTVIF-GGVGQGRQVEAMRR-GVDVLVAAPGRL 136
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+M + +D R+LEILVLDEADR+LDMGF + I I++ LP+ R+T LFSAT ++
Sbjct: 137 LDLMGQ-GFIDLRDLEILVLDEADRMLDMGFVRDIKRIVAALPRDRQTLLFSATMPNSIT 195
Query: 123 ELSKAGLRNPVRVEVRAESKS 143
EL+ + LR+P +VEV S +
Sbjct: 196 ELAGSLLRDPAKVEVTPPSST 216
>gi|443893885|dbj|GAC71341.1| ATP-dependent RNA helicase [Pseudozyma antarctica T-34]
Length = 562
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 85/134 (63%), Gaps = 2/134 (1%)
Query: 4 IISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLY 63
+++PTREL+ QI + ST+ V+S +VGG+++ + + + ++++ TPGRL
Sbjct: 188 VLAPTRELAYQISQQVEALGSTI-GVRSATIVGGMDMMSQSIALSKR-PHVIVATPGRLQ 245
Query: 64 DIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVEE 123
D +E R L+ LV+DEADRLLDM F I ++ +P+ RRT LFSAT T V +
Sbjct: 246 DHLENTKGFSLRGLQYLVMDEADRLLDMDFGPIIDKLLQSIPRERRTMLFSATMTTKVAK 305
Query: 124 LSKAGLRNPVRVEV 137
L +A L+NPVRVEV
Sbjct: 306 LQRASLKNPVRVEV 319
>gi|429961535|gb|ELA41080.1| hypothetical protein VICG_01873 [Vittaforma corneae ATCC 50505]
Length = 539
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 88/136 (64%), Gaps = 9/136 (6%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+II+PTREL QI +A F +KS +++GGV ++ D+ K+E E +++GTPGR
Sbjct: 94 ALIIAPTRELCIQISDIANSF-----GIKSSIIIGGVPIEEDLNKLESE---IVVGTPGR 145
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L +I + F ++ LVLDE+D+LL +GF++++ I+ LPK R TGLFSAT + V
Sbjct: 146 LLEITSE-NAKKFSRIKYLVLDESDKLLSLGFEQKLLKILECLPKNRITGLFSATIDDQV 204
Query: 122 EELSKAGLRNPVRVEV 137
++ L+NPV +++
Sbjct: 205 TRFCQSSLKNPVTIKI 220
>gi|33593906|ref|NP_881550.1| ATP-dependent RNA helicase DbpA [Bordetella pertussis Tohama I]
gi|384205211|ref|YP_005590950.1| ATP-dependent RNA helicase DbpA [Bordetella pertussis CS]
gi|408416679|ref|YP_006627386.1| ATP-dependent RNA helicase [Bordetella pertussis 18323]
gi|410421817|ref|YP_006902266.1| ATP-dependent RNA helicase [Bordetella bronchiseptica MO149]
gi|427825146|ref|ZP_18992208.1| probable ATP-dependent RNA helicase [Bordetella bronchiseptica
Bbr77]
gi|33563980|emb|CAE43244.1| probable ATP-dependent RNA helicase [Bordetella pertussis Tohama I]
gi|332383325|gb|AEE68172.1| ATP-dependent RNA helicase DbpA [Bordetella pertussis CS]
gi|401778849|emb|CCJ64307.1| probable ATP-dependent RNA helicase [Bordetella pertussis 18323]
gi|408449112|emb|CCJ60799.1| probable ATP-dependent RNA helicase [Bordetella bronchiseptica
MO149]
gi|410590411|emb|CCN05498.1| probable ATP-dependent RNA helicase [Bordetella bronchiseptica
Bbr77]
Length = 462
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 84/144 (58%), Gaps = 2/144 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+ Q+ + +P+VK + L GG + + + G +L++GTPGR+
Sbjct: 76 LVLCPTRELADQVAQELRRLARLIPNVKVLTLCGGAAARPQAESLAR-GTHLVVGTPGRI 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D + R LD L LVLDEADR++DMGF I+ I S P R+T LFSAT + +
Sbjct: 135 QDHLAR-GSLDLSTLNTLVLDEADRMVDMGFYDDIAAIASHCPARRQTLLFSATYPDNIR 193
Query: 123 ELSKAGLRNPVRVEVRAESKSHHV 146
+LS LRNP ++V A+ + +
Sbjct: 194 KLSARFLRNPAEIKVEAQHDASRI 217
>gi|410995656|gb|AFV97121.1| hypothetical protein B649_04035 [uncultured Sulfuricurvum sp.
RIFRC-1]
Length = 429
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 98/165 (59%), Gaps = 3/165 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++Q+ + + LP +KS ++ GGV + + + G ++LI TPGRL
Sbjct: 78 LILTPTRELAAQVADSVKIYGKYLP-LKSAVIFGGVGINPQITMLRN-GIDILIATPGRL 135
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D + + V D +E+ VLDEADR+LDMGF + I +I+ LPK+R+ +FSAT ++ ++
Sbjct: 136 LDHVGQGTV-DLSAVEVFVLDEADRMLDMGFIRDIRRVITILPKVRQNLMFSATYSDEIK 194
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLASSKTPLGLHLEVI 167
L+ LRNP VEV + S + S L K L E+I
Sbjct: 195 TLANTLLRNPAEVEVARRNTSSELVTQSVILVDCKRKSALLGELI 239
>gi|340505359|gb|EGR31696.1| hypothetical protein IMG5_104100 [Ichthyophthirius multifiliis]
Length = 573
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 60/150 (40%), Positives = 94/150 (62%), Gaps = 3/150 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+II+PTREL++QI+ VA+ I D+ LL+GG KA+ K+ G NL+I TPGRL
Sbjct: 170 IIITPTRELATQIFDVAKEIIFN-HDLTLGLLIGGTNRKAEATKLRL-GINLIISTPGRL 227
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKL-RRTGLFSATQTEAV 121
D ++ F NL+ L++DEAD ++ +GF+++++ I+ LPK R+T LFSAT T+ +
Sbjct: 228 LDHLQNTSNFIFSNLKTLIIDEADAIMKIGFEEELNEILKILPKENRQTALFSATITKQI 287
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQ 151
E L+K L+ P+ + + S+ V Q
Sbjct: 288 ENLAKLSLKQPLYIGLDENSEISTVEGLEQ 317
>gi|153215146|ref|ZP_01949844.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae 1587]
gi|124114870|gb|EAY33690.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae 1587]
Length = 464
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 91/135 (67%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++QI + LP +KS ++ GGV++ ++++ + GA++L+ TPGRL
Sbjct: 77 LILTPTRELAAQIQDNVMLYGRHLP-LKSAVVFGGVKINPQMQRMCK-GADILVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + + + F LEILVLDEADR+LDMGF + I I+ LP+ R+ LFSAT + +
Sbjct: 135 MDLYNQ-NAVKFDQLEILVLDEADRMLDMGFIRDIRKILKLLPEKRQNLLFSATFSTEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
EL+K + NPV + V
Sbjct: 194 ELAKGLVNNPVEISV 208
>gi|91786555|ref|YP_547507.1| ATP-dependent RNA helicase DbpA [Polaromonas sp. JS666]
gi|91695780|gb|ABE42609.1| ATP-dependent RNA helicase DbpA [Polaromonas sp. JS666]
Length = 468
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 88/145 (60%), Gaps = 2/145 (1%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
M++ PTREL+ Q+ + ++K V L GGV ++ V ++ GA++++GTPGR
Sbjct: 77 AMVLCPTRELADQVATEIRRLARAEENIKVVTLCGGVPLRNQVSSLQN-GAHIVVGTPGR 135
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ D +ER + LD L LVLDEADR+LDMGF I+ + + P R+T LFSAT E +
Sbjct: 136 IMDHLER-ETLDVDALNTLVLDEADRMLDMGFYNDIATVAKQCPDERQTLLFSATYPEGI 194
Query: 122 EELSKAGLRNPVRVEVRAESKSHHV 146
+LS+ ++ P + V+A+ + +
Sbjct: 195 AKLSQQFMKEPQTITVQAQHEKSKI 219
>gi|189533973|ref|XP_001922220.1| PREDICTED: probable ATP-dependent RNA helicase DDX10 [Danio rerio]
Length = 864
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 90/141 (63%), Gaps = 3/141 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ Q + V + + + + L++GG ++K + +KI N++I TPGR
Sbjct: 145 ALIISPTRELAYQTFEVLRK-VGKNHEFSAGLVIGGKDLKDESEKIHR--TNIIICTPGR 201
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M+ +L +LVLDEADR+LDMGF ++ I+ LPK R+T LFSATQT +V
Sbjct: 202 LLQHMDETATFHASDLHMLVLDEADRILDMGFADTLNAIVENLPKSRQTLLFSATQTRSV 261
Query: 122 EELSKAGLRNPVRVEVRAESK 142
++L++ L++P V V ++K
Sbjct: 262 KDLARLSLKDPEYVWVHEQAK 282
>gi|421355237|ref|ZP_15805568.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HE-45]
gi|395949907|gb|EJH60526.1| ATP-dependent RNA helicase rhlE [Vibrio cholerae HE-45]
Length = 464
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 91/135 (67%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++QI + LP +KS ++ GGV++ ++++ + GA++L+ TPGRL
Sbjct: 77 LILTPTRELAAQIQDNVMLYGRHLP-LKSAVVFGGVKINPQMQRMCK-GADILVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + + + F LEILVLDEADR+LDMGF + I I+ LP+ R+ LFSAT + +
Sbjct: 135 MDLYNQ-NAVKFDQLEILVLDEADRMLDMGFIRDIRKILKLLPEKRQNLLFSATFSTEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
EL+K + NPV + V
Sbjct: 194 ELAKGLVNNPVEISV 208
>gi|254513899|ref|ZP_05125960.1| ATP-dependent rna helicase, dead box family [gamma proteobacterium
NOR5-3]
gi|219676142|gb|EED32507.1| ATP-dependent rna helicase, dead box family [gamma proteobacterium
NOR5-3]
Length = 435
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 103/167 (61%), Gaps = 11/167 (6%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL++Q++ + + L D++S ++ GGV+ + + + G + L+ TPGRL
Sbjct: 77 LVLTPTRELAAQVHASVEAYGQYL-DLRSAVVFGGVKAEPQIAALAR-GVDTLVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ ++ V DF LE+LVLDEADR+LDMGF I I+ +LP+ R+T +FSAT + +
Sbjct: 135 LDLAQQGAV-DFSALEVLVLDEADRMLDMGFIHDIRRIVDQLPENRQTLMFSATFSNEIR 193
Query: 123 ELSKAGLRNPVRVEVRAESKSHHVSASSQQLA-----SSKTPLGLHL 164
L+ L +PV VEV A + + + QQ+A KT L +HL
Sbjct: 194 ALAAQYLIDPVSVEVAAANSTTEL---VQQMAYPVDRDRKTDLLIHL 237
>gi|33603341|ref|NP_890901.1| ATP-dependent RNA helicase DbpA [Bordetella bronchiseptica RB50]
gi|412341336|ref|YP_006970091.1| ATP-dependent RNA helicase [Bordetella bronchiseptica 253]
gi|427816351|ref|ZP_18983415.1| probable ATP-dependent RNA helicase [Bordetella bronchiseptica
1289]
gi|33577465|emb|CAE34730.1| probable ATP-dependent RNA helicase [Bordetella bronchiseptica
RB50]
gi|408771170|emb|CCJ55969.1| probable ATP-dependent RNA helicase [Bordetella bronchiseptica 253]
gi|410567351|emb|CCN24922.1| probable ATP-dependent RNA helicase [Bordetella bronchiseptica
1289]
Length = 462
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 84/144 (58%), Gaps = 2/144 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+ Q+ + +P+VK + L GG + + + G +L++GTPGR+
Sbjct: 76 LVLCPTRELADQVAQELRRLARLIPNVKVLTLCGGAAARPQAESLAR-GTHLVVGTPGRI 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D + R LD L LVLDEADR++DMGF I+ I S P R+T LFSAT + +
Sbjct: 135 QDHLAR-GSLDLSTLNTLVLDEADRMVDMGFYDDIAAIASHCPARRQTLLFSATYPDNIR 193
Query: 123 ELSKAGLRNPVRVEVRAESKSHHV 146
+LS LRNP ++V A+ + +
Sbjct: 194 KLSARFLRNPAEIKVEAQHDASRI 217
>gi|222109707|ref|YP_002551971.1| dead/deah box helicase domain-containing protein [Acidovorax ebreus
TPSY]
gi|221729151|gb|ACM31971.1| DEAD/DEAH box helicase domain protein [Acidovorax ebreus TPSY]
Length = 469
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 89/146 (60%), Gaps = 2/146 (1%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
G+++ PTREL+ Q+ + ++K V + GGV + + +E GA++++GTPGR
Sbjct: 85 GLVLCPTRELADQVATEIRRLARAQDNIKVVTVYGGVPSRGQIASLEN-GAHIVVGTPGR 143
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ D+MER LD L+ LVLDEADR+LDMGF I ++ + P R+T LFSAT + +
Sbjct: 144 VMDLMERGK-LDIAKLKTLVLDEADRMLDMGFLADIETVVRQCPAERQTLLFSATYPDGI 202
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVS 147
L++ +R P V+V A+ + ++
Sbjct: 203 AGLAQRFMRAPQMVKVAAQHGAGKIA 228
>gi|33598402|ref|NP_886045.1| ATP-dependent RNA helicase DbpA [Bordetella parapertussis 12822]
gi|33574531|emb|CAE39177.1| probable ATP-dependent RNA helicase [Bordetella parapertussis]
Length = 462
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 84/144 (58%), Gaps = 2/144 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+ Q+ + +P+VK + L GG + + + G +L++GTPGR+
Sbjct: 76 LVLCPTRELADQVAQELRRLARLIPNVKVLTLCGGAAARPQAESLAR-GTHLVVGTPGRI 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D + R LD L LVLDEADR++DMGF I+ I S P R+T LFSAT + +
Sbjct: 135 QDHLAR-GSLDLSTLNTLVLDEADRMVDMGFYDDIAAIASHCPARRQTLLFSATYPDNIR 193
Query: 123 ELSKAGLRNPVRVEVRAESKSHHV 146
+LS LRNP ++V A+ + +
Sbjct: 194 KLSARFLRNPAEIKVEAQHDASRI 217
>gi|388568786|ref|ZP_10155197.1| ATP-dependent RNA helicase [Hydrogenophaga sp. PBC]
gi|388264040|gb|EIK89619.1| ATP-dependent RNA helicase [Hydrogenophaga sp. PBC]
Length = 464
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 85/144 (59%), Gaps = 2/144 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+ Q+ + ++K V L GGV ++ + +E GA++++GTPGR+
Sbjct: 79 LVLCPTRELADQVSTEIRRLARAADNIKLVTLCGGVPLRGQLASLEH-GAHIVVGTPGRV 137
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D +ER L L LVLDEADR+LDMGF I+ + R P R+T LFSAT E +
Sbjct: 138 LDHLERGS-LPLDALNTLVLDEADRMLDMGFFDDIAAVAKRCPTARQTLLFSATYPEGIA 196
Query: 123 ELSKAGLRNPVRVEVRAESKSHHV 146
+L+ LR PV V V+A+ +
Sbjct: 197 QLAARFLREPVTVAVQAQHSGERI 220
>gi|307610952|emb|CBX00571.1| hypothetical protein LPW_22891 [Legionella pneumophila 130b]
Length = 468
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 100/173 (57%), Gaps = 10/173 (5%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+++ PTREL+ Q+ + +P+VK + L GG+ ++ + + GA++++GTPGR
Sbjct: 82 ALVLCPTRELAEQVSQAIRRLACFMPNVKIINLSGGIPMQPQLDSLRH-GAHIIVGTPGR 140
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ ++ LD ++ LVLDEADR+LDMGF I IIS PK R+T LFSAT E +
Sbjct: 141 ILKHLKNAS-LDLSQVKALVLDEADRMLDMGFFDDIKNIISVCPKQRQTLLFSATYPEEI 199
Query: 122 EELSKAGLRNPVRV-------EVRAESKSHHVSASSQQLASSKTPLGLHLEVI 167
++LSK ++NP V E+ E + V+ +Q+ K+ L LH + +
Sbjct: 200 KQLSKQFMKNPKEVYVETPLDEIDIEQHFYEVTKQTQKFPLLKSLL-LHYQPV 251
>gi|427819856|ref|ZP_18986919.1| probable ATP-dependent RNA helicase [Bordetella bronchiseptica
D445]
gi|410570856|emb|CCN19056.1| probable ATP-dependent RNA helicase [Bordetella bronchiseptica
D445]
Length = 463
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 84/144 (58%), Gaps = 2/144 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+ Q+ + +P+VK + L GG + + + G +L++GTPGR+
Sbjct: 76 LVLCPTRELADQVAQELRRLARLIPNVKVLTLCGGAAARPQAESLAR-GTHLVVGTPGRI 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D + R LD L LVLDEADR++DMGF I+ I S P R+T LFSAT + +
Sbjct: 135 QDHLAR-GSLDLSTLNTLVLDEADRMVDMGFYDDIAAIASHCPARRQTLLFSATYPDNIR 193
Query: 123 ELSKAGLRNPVRVEVRAESKSHHV 146
+LS LRNP ++V A+ + +
Sbjct: 194 KLSARFLRNPAEIKVEAQHDASRI 217
>gi|149375720|ref|ZP_01893489.1| Superfamily II DNA and RNA helicase [Marinobacter algicola DG893]
gi|149360122|gb|EDM48577.1| Superfamily II DNA and RNA helicase [Marinobacter algicola DG893]
Length = 441
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 94/141 (66%), Gaps = 3/141 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++Q++ + +P KS ++ GGV++ + K+ + G ++L+ TPGRL
Sbjct: 76 LILAPTRELAAQVHDSVALYSRYMP-TKSAVVFGGVKINPQMMKLRK-GLDVLVATPGRL 133
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ ++ + + F +EILVLDEADR+LDMGF + I I++ LP R+ LFSAT + +
Sbjct: 134 MDLYQQ-NAVRFNEVEILVLDEADRMLDMGFIRDIRKILALLPAKRQNLLFSATFSNEIR 192
Query: 123 ELSKAGLRNPVRVEVRAESKS 143
L++ L NPV+VEV A + +
Sbjct: 193 TLAEGLLDNPVQVEVAARNTA 213
>gi|410611270|ref|ZP_11322369.1| ATP-dependent RNA helicase rhlB [Glaciecola psychrophila 170]
gi|410169121|dbj|GAC36258.1| ATP-dependent RNA helicase rhlB [Glaciecola psychrophila 170]
Length = 438
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 89/135 (65%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++QI Q + LP +KS ++ GGV + + ++ + G ++L+ TPGRL
Sbjct: 77 LILTPTRELAAQIAESVQTYGKDLP-LKSAVVFGGVGINPQMIRLRK-GVDILVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + + + F LEILV+DEADR+LDMGF I II LP+ R+ +FSAT ++ +
Sbjct: 135 LDLYNQ-NAVKFSELEILVMDEADRMLDMGFIHDIKKIIKLLPQKRQNLMFSATFSDDIR 193
Query: 123 ELSKAGLRNPVRVEV 137
+L+K + NPV + V
Sbjct: 194 KLAKGLVNNPVEISV 208
>gi|404379274|ref|ZP_10984339.1| hypothetical protein HMPREF9021_01703 [Simonsiella muelleri ATCC
29453]
gi|294482727|gb|EFG30416.1| hypothetical protein HMPREF9021_01703 [Simonsiella muelleri ATCC
29453]
Length = 455
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 90/144 (62%), Gaps = 2/144 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL++Q+ AQ + + + V++V LVGG +K + ++++ TPGRL
Sbjct: 79 LVLTPTRELAAQVEKNAQIYANNMKWVRTVTLVGGSSFGQQIKMLSRP-IDVIVATPGRL 137
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D M R +DF LE+L+LDEADR+LDMGF I I++ P+ R+T LFSAT AV
Sbjct: 138 MDHM-RSGRIDFERLEVLILDEADRMLDMGFIDDIETIVAATPEDRQTLLFSATWDGAVG 196
Query: 123 ELSKAGLRNPVRVEVRAESKSHHV 146
+L++ +NP +E+ E K +
Sbjct: 197 KLARKLTKNPEIIEIEREDKQGKI 220
>gi|167540072|ref|XP_001741531.1| ATP-dependent RNA helicase has1 [Entamoeba dispar SAW760]
gi|165893947|gb|EDR22062.1| ATP-dependent RNA helicase has1, putative [Entamoeba dispar SAW760]
Length = 518
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 101/150 (67%), Gaps = 5/150 (3%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ Q + V + ++ ++ L++GG K ++ ++GA++++ TPGR
Sbjct: 132 AIIISPTRELAIQTFEVLEKILAHSERTRT-LIIGGSSKKK-EEEALKKGASIVVATPGR 189
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D + +RNL+ LV+DEADR++++GF++++ I++RLPK R+T LFSATQ+E V
Sbjct: 190 LLDHIINTKCFIYRNLKCLVIDEADRIMEVGFEEEMRQILNRLPKNRQTMLFSATQSEKV 249
Query: 122 EELSKAGLRNPVRVEVRAESKSHHVSASSQ 151
++++ L+ PV + V ++S +S SS+
Sbjct: 250 DDIANISLKQPVVINVESQS---TISTSSK 276
>gi|395519419|ref|XP_003763847.1| PREDICTED: ATP-dependent RNA helicase DDX18 isoform 1 [Sarcophilus
harrisii]
Length = 640
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 93/150 (62%), Gaps = 3/150 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I+SPTREL+ Q + V + +S L++GG A+ +K+ G N+++ TPGRL
Sbjct: 224 LILSPTRELAMQTFGVLKELMSYHVHTYG-LIMGGSNRSAEAQKLAN-GINIIVATPGRL 281
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D M+ F+NL+ LV+DEADR+L++GF++++ II LPK R+T LFSATQT VE
Sbjct: 282 LDHMQNTPGFMFKNLQCLVIDEADRILEVGFEEEMKQIIKLLPKRRQTMLFSATQTRKVE 341
Query: 123 ELSKAGLRN-PVRVEVRAESKSHHVSASSQ 151
+L+K L+ P+ V V + + V Q
Sbjct: 342 DLAKISLKKEPLYVGVDDDKDTATVDGLEQ 371
>gi|333375154|ref|ZP_08466978.1| ATP-dependent RNA helicase [Kingella kingae ATCC 23330]
gi|332971571|gb|EGK10521.1| ATP-dependent RNA helicase [Kingella kingae ATCC 23330]
Length = 481
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 89/144 (61%), Gaps = 2/144 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++++PTREL++Q+ AQ + + ++SV LVGG +K + ++++ TPGRL
Sbjct: 99 LVLTPTRELAAQVEKNAQIYSQNMKWLRSVTLVGGSSFGQQIKALSRP-IDVIVATPGRL 157
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D M R +DF LE+LVLDEADR+LDMGF I I++ P+ R+T LFSAT AV
Sbjct: 158 MDHM-RSGRIDFDRLEVLVLDEADRMLDMGFIDDIETIVAATPEDRQTLLFSATWDGAVG 216
Query: 123 ELSKAGLRNPVRVEVRAESKSHHV 146
+L++ +NP +E+ E K +
Sbjct: 217 KLARKLTKNPEVIEIEREDKQGKI 240
>gi|329912990|ref|ZP_08275858.1| ATP-dependent RNA helicase [Oxalobacteraceae bacterium IMCC9480]
gi|327545464|gb|EGF30669.1| ATP-dependent RNA helicase [Oxalobacteraceae bacterium IMCC9480]
Length = 410
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 90/135 (66%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+ Q++ + ++LP +++ + GGV + + K+ + G ++L+ TPGRL
Sbjct: 78 LVLVPTRELAEQVHQAFGEYGASLP-LRTHVAYGGVSINPQMMKLRK-GLDVLVATPGRL 135
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ R + + F L+ LVLDEADR+LD+GF +++ + + LPK R+T LFSAT ++ +
Sbjct: 136 LDLY-RQNAVKFEQLQTLVLDEADRMLDLGFSRELDEVFAALPKKRQTLLFSATFSDEIR 194
Query: 123 ELSKAGLRNPVRVEV 137
LS L NPVR+E+
Sbjct: 195 ALSTTLLDNPVRIEI 209
>gi|168183325|ref|ZP_02617989.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum Bf]
gi|182673470|gb|EDT85431.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum Bf]
Length = 425
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 87/136 (63%), Gaps = 3/136 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++++PTREL+ QI + + + ++KS ++ GGV K + EG ++LI TPGR
Sbjct: 78 ALVLAPTRELAIQIAESFECYGKYI-NLKSAVIFGGVSQNPQTK-VLREGVDILIATPGR 135
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ D+ + +D RN+E VLDEADR+LDMG + IIS+LPK+R+ LFSAT +
Sbjct: 136 MLDLFNQ-KYIDLRNIEFFVLDEADRMLDMGMIHDVKKIISKLPKIRQNLLFSATMPSEI 194
Query: 122 EELSKAGLRNPVRVEV 137
+L + +++P+RVEV
Sbjct: 195 TKLVDSIVKDPIRVEV 210
>gi|15600973|ref|NP_232603.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121586756|ref|ZP_01676539.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae 2740-80]
gi|121727729|ref|ZP_01680817.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae V52]
gi|147672261|ref|YP_001215860.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae O395]
gi|153816784|ref|ZP_01969451.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae NCTC 8457]
gi|227119425|ref|YP_002821320.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae O395]
gi|227811827|ref|YP_002811837.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae M66-2]
gi|229506632|ref|ZP_04396141.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae BX 330286]
gi|229510570|ref|ZP_04400050.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae B33]
gi|229517298|ref|ZP_04406743.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae RC9]
gi|229605109|ref|YP_002875813.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae MJ-1236]
gi|254850597|ref|ZP_05239947.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae MO10]
gi|255745988|ref|ZP_05419935.1| ATP-dependent RNA helicase RhlE [Vibrio cholera CIRS 101]
gi|262162174|ref|ZP_06031189.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae INDRE 91/1]
gi|262167359|ref|ZP_06035068.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae RC27]
gi|298500057|ref|ZP_07009863.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae MAK 757]
gi|360038207|ref|YP_004939969.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae O1 str.
2010EL-1786]
gi|379743642|ref|YP_005334694.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae IEC224]
gi|417812245|ref|ZP_12458906.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-49A2]
gi|417816459|ref|ZP_12463089.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HCUF01]
gi|418330102|ref|ZP_12941135.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-06A1]
gi|418337359|ref|ZP_12946254.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-23A1]
gi|418339628|ref|ZP_12948515.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-28A1]
gi|418349026|ref|ZP_12953758.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-43A1]
gi|418353791|ref|ZP_12956516.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-61A1]
gi|419824233|ref|ZP_14347762.1| type III restriction enzyme, res subunit [Vibrio cholerae
CP1033(6)]
gi|421317231|ref|ZP_15767801.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1032(5)]
gi|421319698|ref|ZP_15770256.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1038(11)]
gi|421323740|ref|ZP_15774267.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1041(14)]
gi|421326713|ref|ZP_15777231.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1042(15)]
gi|421331028|ref|ZP_15781509.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1046(19)]
gi|421335430|ref|ZP_15785893.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1048(21)]
gi|421340967|ref|ZP_15791397.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-20A2]
gi|421346365|ref|ZP_15796749.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-46A1]
gi|422885377|ref|ZP_16931810.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-40A1]
gi|422898086|ref|ZP_16935500.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-48A1]
gi|422904241|ref|ZP_16939190.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-70A1]
gi|422914759|ref|ZP_16949258.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HFU-02]
gi|422927136|ref|ZP_16960140.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-38A1]
gi|423146476|ref|ZP_17134043.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-19A1]
gi|423147165|ref|ZP_17134639.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-21A1]
gi|423150988|ref|ZP_17138270.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-22A1]
gi|423157880|ref|ZP_17144960.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-32A1]
gi|423161452|ref|ZP_17148367.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-33A2]
gi|423162647|ref|ZP_17149508.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-48B2]
gi|423732471|ref|ZP_17705767.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-17A1]
gi|423737120|ref|ZP_17710220.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-50A2]
gi|423901328|ref|ZP_17728088.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-62A1]
gi|423912583|ref|ZP_17728805.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-77A1]
gi|424000098|ref|ZP_17743254.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-17A2]
gi|424003759|ref|ZP_17746813.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-37A1]
gi|424021889|ref|ZP_17761597.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-62B1]
gi|424028540|ref|ZP_17768136.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-69A1]
gi|424587832|ref|ZP_18027403.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1030(3)]
gi|424592642|ref|ZP_18032056.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1040(13)]
gi|424596501|ref|ZP_18035807.1| DEAD/DEAH box helicase family protein [Vibrio Cholerae CP1044(17)]
gi|424603353|ref|ZP_18042486.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1047(20)]
gi|424604146|ref|ZP_18043188.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1050(23)]
gi|424608095|ref|ZP_18047028.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-39A1]
gi|424614737|ref|ZP_18053516.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-41A1]
gi|424618598|ref|ZP_18057256.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-42A1]
gi|424619529|ref|ZP_18058131.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-47A1]
gi|424642409|ref|ZP_18080245.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-56A2]
gi|424650247|ref|ZP_18087849.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-57A2]
gi|424654038|ref|ZP_18091411.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-81A2]
gi|440711063|ref|ZP_20891706.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae 4260B]
gi|443505275|ref|ZP_21072213.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-64A1]
gi|443509172|ref|ZP_21075920.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-65A1]
gi|443513014|ref|ZP_21079636.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-67A1]
gi|443516560|ref|ZP_21083059.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-68A1]
gi|443520221|ref|ZP_21086602.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-71A1]
gi|443521423|ref|ZP_21087743.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-72A2]
gi|443530196|ref|ZP_21096213.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-7A1]
gi|443532844|ref|ZP_21098845.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-80A1]
gi|443537560|ref|ZP_21103418.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-81A1]
gi|449058163|ref|ZP_21736459.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae O1 str. Inaba
G4222]
gi|9657596|gb|AAF96116.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121549053|gb|EAX59090.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae 2740-80]
gi|121629946|gb|EAX62356.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae V52]
gi|126512587|gb|EAZ75181.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae NCTC 8457]
gi|146314644|gb|ABQ19184.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae O395]
gi|227010969|gb|ACP07180.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae M66-2]
gi|227014875|gb|ACP11084.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae O395]
gi|229345334|gb|EEO10307.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae RC9]
gi|229353015|gb|EEO17955.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae B33]
gi|229356983|gb|EEO21901.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae BX 330286]
gi|229371595|gb|ACQ62017.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae MJ-1236]
gi|254846302|gb|EET24716.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae MO10]
gi|255735742|gb|EET91140.1| ATP-dependent RNA helicase RhlE [Vibrio cholera CIRS 101]
gi|262024243|gb|EEY42935.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae RC27]
gi|262028249|gb|EEY46907.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae INDRE 91/1]
gi|297542038|gb|EFH78089.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae MAK 757]
gi|340039609|gb|EGR00582.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HCUF01]
gi|340045065|gb|EGR06013.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-49A2]
gi|341629945|gb|EGS55064.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-70A1]
gi|341630724|gb|EGS55691.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-40A1]
gi|341630786|gb|EGS55745.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-48A1]
gi|341635257|gb|EGS59977.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HFU-02]
gi|341644933|gb|EGS69094.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-38A1]
gi|356420825|gb|EHH74334.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-19A1]
gi|356426337|gb|EHH79649.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-06A1]
gi|356427189|gb|EHH80441.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-21A1]
gi|356430743|gb|EHH83948.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-23A1]
gi|356438239|gb|EHH91281.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-32A1]
gi|356440106|gb|EHH93065.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-22A1]
gi|356442615|gb|EHH95452.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-28A1]
gi|356442789|gb|EHH95623.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-33A2]
gi|356445888|gb|EHH98688.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-43A1]
gi|356454856|gb|EHI07503.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-61A1]
gi|356457662|gb|EHI10174.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-48B2]
gi|356649361|gb|AET29415.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae O1 str.
2010EL-1786]
gi|378796236|gb|AFC59706.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae IEC224]
gi|395919689|gb|EJH30512.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1032(5)]
gi|395921754|gb|EJH32573.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1041(14)]
gi|395924586|gb|EJH35388.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1038(11)]
gi|395933228|gb|EJH43969.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1046(19)]
gi|395933638|gb|EJH44377.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1042(15)]
gi|395935112|gb|EJH45847.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1048(21)]
gi|395938451|gb|EJH49143.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-20A2]
gi|395947892|gb|EJH58547.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-46A1]
gi|395959847|gb|EJH70256.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-42A1]
gi|395968920|gb|EJH78832.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-57A2]
gi|395968970|gb|EJH78880.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-56A2]
gi|395971068|gb|EJH80767.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1030(3)]
gi|395972411|gb|EJH82004.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1047(20)]
gi|395980357|gb|EJH89615.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-47A1]
gi|408009037|gb|EKG46974.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-41A1]
gi|408015303|gb|EKG52892.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-39A1]
gi|408042567|gb|EKG78613.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1040(13)]
gi|408049317|gb|EKG84544.1| DEAD/DEAH box helicase family protein [Vibrio Cholerae CP1044(17)]
gi|408050496|gb|EKG85657.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1050(23)]
gi|408060801|gb|EKG95411.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-81A2]
gi|408613896|gb|EKK87182.1| type III restriction enzyme, res subunit [Vibrio cholerae
CP1033(6)]
gi|408619725|gb|EKK92739.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-17A1]
gi|408650865|gb|EKL22139.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-50A2]
gi|408652886|gb|EKL24076.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-62A1]
gi|408663825|gb|EKL34671.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-77A1]
gi|408854392|gb|EKL94149.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-37A1]
gi|408854467|gb|EKL94222.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-17A2]
gi|408877724|gb|EKM16757.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-69A1]
gi|408880066|gb|EKM18998.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-62B1]
gi|439973407|gb|ELP49638.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae 4260B]
gi|443430315|gb|ELS72887.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-64A1]
gi|443434156|gb|ELS80315.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-65A1]
gi|443437983|gb|ELS87714.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-67A1]
gi|443442093|gb|ELS95407.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-68A1]
gi|443446084|gb|ELT02755.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-71A1]
gi|443452521|gb|ELT12705.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-72A2]
gi|443459766|gb|ELT27160.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-7A1]
gi|443463936|gb|ELT34886.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-80A1]
gi|443467569|gb|ELT42225.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-81A1]
gi|448263625|gb|EMB00866.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae O1 str. Inaba
G4222]
Length = 451
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 91/135 (67%), Gaps = 3/135 (2%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL++QI + LP +KS ++ GGV++ ++++ + GA++L+ TPGRL
Sbjct: 77 LILTPTRELAAQIQDNVMLYGRHLP-LKSAVVFGGVKINPQMQRMCK-GADILVATPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D+ + + + F LEILVLDEADR+LDMGF + I I+ LP+ R+ LFSAT + +
Sbjct: 135 MDLYNQ-NAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKRQNLLFSATFSTEIR 193
Query: 123 ELSKAGLRNPVRVEV 137
EL+K + NPV + V
Sbjct: 194 ELAKGLVNNPVEISV 208
>gi|444319404|ref|XP_004180359.1| hypothetical protein TBLA_0D03400 [Tetrapisispora blattae CBS 6284]
gi|387513401|emb|CCH60840.1| hypothetical protein TBLA_0D03400 [Tetrapisispora blattae CBS 6284]
Length = 775
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 89/130 (68%), Gaps = 3/130 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QIY V I + + L++GG +VK + ++I N+LIGTPGR
Sbjct: 117 ALIISPTRELAIQIYEVLLK-IGSRTSFSAGLVIGGKDVKFESERISR--INILIGTPGR 173
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ M++ L+ NL++LVLDEADR LDMGF+K + I++ LP R+T LFSATQ++++
Sbjct: 174 ILQHMDQAVGLNLNNLQMLVLDEADRCLDMGFKKTLDAIVNNLPISRQTLLFSATQSQSL 233
Query: 122 EELSKAGLRN 131
++L++ L +
Sbjct: 234 DDLARLSLTD 243
>gi|367014679|ref|XP_003681839.1| hypothetical protein TDEL_0E03850 [Torulaspora delbrueckii]
gi|359749500|emb|CCE92628.1| hypothetical protein TDEL_0E03850 [Torulaspora delbrueckii]
Length = 761
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 88/130 (67%), Gaps = 3/130 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QIY V I + L++GG +VK ++++I N+L+GTPGR
Sbjct: 116 ALIISPTRELAMQIYEVLTK-IGGHTSFSAGLVIGGKDVKFELERISR--INILVGTPGR 172
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
+ M++ L+ NL++LVLDEADR LDMGF+K + I+S LP R+T LFSATQ++++
Sbjct: 173 ILQHMDQAVGLNADNLQMLVLDEADRCLDMGFKKTLDAIVSNLPPSRQTLLFSATQSQSL 232
Query: 122 EELSKAGLRN 131
+L++ L +
Sbjct: 233 ADLARLSLTD 242
>gi|239624536|ref|ZP_04667567.1| DEAD/DEAH box helicase domain-containing protein [Clostridiales
bacterium 1_7_47_FAA]
gi|239520922|gb|EEQ60788.1| DEAD/DEAH box helicase domain-containing protein [Clostridiales
bacterium 1_7_47FAA]
Length = 518
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 89/136 (65%), Gaps = 3/136 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+I++PTREL+ QI+ + + + P + S ++ GGV K ++ + G ++L+ TPGR
Sbjct: 78 ALILTPTRELALQIHENIEEYGAGTP-INSAVIFGGVSAKPQIQSLRR-GIDILVATPGR 135
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D++ + ++ D +EI VLDEADR+LDMGF + +I+ LPK R+T LFSAT + +
Sbjct: 136 LLDLIGQHEI-DLSFVEIFVLDEADRMLDMGFIHDVKRVITLLPKKRQTLLFSATMPDEI 194
Query: 122 EELSKAGLRNPVRVEV 137
+ L+ L NPV+VEV
Sbjct: 195 QALAAKLLHNPVKVEV 210
>gi|451823382|ref|YP_007459656.1| superfamily II DNA and RNA helicase [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
gi|451776182|gb|AGF47223.1| superfamily II DNA and RNA helicase [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
Length = 480
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 89/142 (62%), Gaps = 2/142 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+I++PTREL+ QI A + S ++ +VGG+ ++ +K + + ++L+ TPGRL
Sbjct: 77 LILTPTRELAMQITKAASSYGSNFHWLRMATIVGGMPYQSQIKALSKR-IDILVATPGRL 135
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D M+ V + +++ LVLDEADR+LDMGF + I I+S LPK R+T LFSAT ++
Sbjct: 136 IDQMQSGRV-NLKSVHTLVLDEADRMLDMGFIEDIQNIVSHLPKERQTMLFSATLDNSIM 194
Query: 123 ELSKAGLRNPVRVEVRAESKSH 144
L+K + NP R+ + +SH
Sbjct: 195 NLAKQMMNNPERISLTNNKQSH 216
>gi|34498308|ref|NP_902523.1| ATP-dependent RNA helicase DbpA [Chromobacterium violaceum ATCC
12472]
gi|34104162|gb|AAQ60521.1| ATP-dependent RNA helicase dbpA [Chromobacterium violaceum ATCC
12472]
Length = 460
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 90/144 (62%), Gaps = 2/144 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+ Q+ + + ++K V L GG + + +E GA++++GTPGRL
Sbjct: 76 LVMCPTRELADQVAQEIRRLARAIDNIKVVTLTGGTPMGPQIGSLEH-GAHIVVGTPGRL 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D + R + L+ ++ LVLDEADR++DMGF ++I I+ P+ R+T LFSAT E +
Sbjct: 135 QDHLFR-ETLNLTGVKTLVLDEADRMIDMGFIEEIVGIVRACPRTRQTLLFSATYPEDIR 193
Query: 123 ELSKAGLRNPVRVEVRAESKSHHV 146
+ S L+NPV V+V + K+ H+
Sbjct: 194 KASAQFLKNPVEVKVESLHKADHI 217
>gi|358342033|dbj|GAA49588.1| ATP-dependent RNA helicase DDX41 [Clonorchis sinensis]
Length = 1343
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 89/152 (58%), Gaps = 7/152 (4%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTL-----PDVKSVLLVGGVEVKADVKKIEEEGANLLI 56
G+I+ P+REL+ Q + V + L P+++ L +GG VK + G ++L+
Sbjct: 982 GLILGPSRELARQTHEVLSSLVDGLVAAGFPEIRCNLCIGGTAVKDQAETFRRSGVHILV 1041
Query: 57 GTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSAT 116
TPGRL D+++R + + LVLDEADR++DMGF++++ I S R+T LFSAT
Sbjct: 1042 ATPGRLIDLLQR-KIFNLEVCRYLVLDEADRMIDMGFEEEVRTIFSYFKGQRQTLLFSAT 1100
Query: 117 QTEAVEELSKAGLRNPVRVEV-RAESKSHHVS 147
+ ++ +K+ L PV V V RA + S +VS
Sbjct: 1101 MPKKIQNFAKSALVKPVTVNVGRAGAASMNVS 1132
>gi|343428869|emb|CBQ72414.1| probable DEAD box protein (putative RNA helicase) [Sporisorium
reilianum SRZ2]
Length = 568
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 85/134 (63%), Gaps = 2/134 (1%)
Query: 4 IISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLY 63
+++PTREL+ QI + ST+ V+S +VGG+++ + + + ++++ TPGRL
Sbjct: 194 VLAPTRELAYQISQQVEALGSTI-GVRSATIVGGMDMMSQSIALSKR-PHVIVATPGRLQ 251
Query: 64 DIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVEE 123
D +E R L+ LV+DEADRLLDM F I ++ +P+ RRT LFSAT T V +
Sbjct: 252 DHLENTKGFSLRGLQYLVMDEADRLLDMDFGPIIDKLLQSIPRERRTMLFSATMTTKVAK 311
Query: 124 LSKAGLRNPVRVEV 137
L +A L+NPVRVEV
Sbjct: 312 LQRASLKNPVRVEV 325
>gi|452820881|gb|EME27918.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
Length = 675
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 86/136 (63%), Gaps = 3/136 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
+IISPTREL+ QI+ V + + + L++GG + + + ++I N+LI TPGR
Sbjct: 127 ALIISPTRELAMQIFQVLRK-VGKNHCFSAGLVIGGKDFEEERERIGR--MNILIATPGR 183
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L M++ D L+ILVLDEAD++LDMGFQ+ I I+ LPK R+T LFSATQT +V
Sbjct: 184 LLQHMDQSTDFDCSRLQILVLDEADQILDMGFQRTIDAILRNLPKQRQTLLFSATQTRSV 243
Query: 122 EELSKAGLRNPVRVEV 137
+ L++ L P V V
Sbjct: 244 QALARLSLEEPEYVAV 259
>gi|427789491|gb|JAA60197.1| Putative atp-dependent rna helicase ddx47 [Rhipicephalus
pulchellus]
Length = 465
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 98/143 (68%), Gaps = 2/143 (1%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
++++PTREL+ QI + +++ VKS ++VGG+++ + ++ +++I TPG
Sbjct: 95 FALVLTPTRELAFQISEQFEALGASI-GVKSAVIVGGIDMMTQALTLAKK-PHVIIATPG 152
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D +E + ++L+ LV+DEADR+L+M F++++ I+ +P+ RRT L+SAT T+
Sbjct: 153 RLVDHLENTKGFNLKSLKYLVMDEADRILNMDFEEEVDKILRVIPRERRTYLYSATMTKK 212
Query: 121 VEELSKAGLRNPVRVEVRAESKS 143
V++L +A LR+PV+VEV ++ ++
Sbjct: 213 VQKLQRASLRDPVKVEVSSKYQT 235
>gi|410474436|ref|YP_006897717.1| ATP-dependent RNA helicase [Bordetella parapertussis Bpp5]
gi|408444546|emb|CCJ51301.1| probable ATP-dependent RNA helicase [Bordetella parapertussis Bpp5]
Length = 459
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 84/144 (58%), Gaps = 2/144 (1%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
+++ PTREL+ Q+ + +P+VK + L GG + + + G +L++GTPGR+
Sbjct: 76 LVLCPTRELADQVAQELRRLARLIPNVKVLTLCGGAAARPQAESLAR-GTHLVVGTPGRI 134
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D + R LD L LVLDEADR++DMGF I+ I S P R+T LFSAT + +
Sbjct: 135 QDHLAR-GSLDLSTLNTLVLDEADRMVDMGFYDDIAAIASHCPARRQTLLFSATYPDNIR 193
Query: 123 ELSKAGLRNPVRVEVRAESKSHHV 146
+LS LRNP ++V A+ + +
Sbjct: 194 KLSARFLRNPAEIKVEAQHDASRI 217
>gi|156548270|ref|XP_001601432.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Nasonia
vitripennis]
Length = 460
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 96/143 (67%), Gaps = 2/143 (1%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
+I++PTREL+ QI + +++ VK V++VGG+++ + ++ +++I TPG
Sbjct: 94 FALILTPTRELAFQISEQFEALGASI-GVKCVVIVGGMDMMTQSLMLAKK-PHIIIATPG 151
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D +E + R+L+ LV+DEADR+L+M F+ ++ I+ +P+ RRT LFSAT T+
Sbjct: 152 RLVDHLENTKGFNLRSLKFLVMDEADRILNMDFEVEVDKILRVIPRERRTLLFSATMTKK 211
Query: 121 VEELSKAGLRNPVRVEVRAESKS 143
V++L +A L+NPV+VEV + ++
Sbjct: 212 VQKLQRASLQNPVKVEVSTKYQT 234
>gi|145255454|ref|XP_001398969.1| ATP-dependent rRNA helicase RRP3 [Aspergillus niger CBS 513.88]
gi|143462251|sp|A2RB17.1|RRP3_ASPNC RecName: Full=ATP-dependent rRNA helicase rrp3
gi|134084560|emb|CAK43313.1| unnamed protein product [Aspergillus niger]
Length = 467
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 93/147 (63%), Gaps = 3/147 (2%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
G++++PTREL+ QI + +++ V+S ++VGG+++ + + ++ ++++ TPG
Sbjct: 118 FGLVLAPTRELAYQISKSFESLGASM-GVRSCVIVGGMDMVSQSISLGKK-PHIIVATPG 175
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D +E RNL+ LV+DEADRLLDM F + I+ LP+ RRT LFSAT +
Sbjct: 176 RLLDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPLLDKILKVLPRERRTFLFSATMSSK 235
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVS 147
VE L +A L NP+RV V + SK VS
Sbjct: 236 VESLQRASLSNPLRVSV-STSKYQTVS 261
>gi|350630756|gb|EHA19128.1| hypothetical protein ASPNIDRAFT_54204 [Aspergillus niger ATCC 1015]
Length = 467
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 93/147 (63%), Gaps = 3/147 (2%)
Query: 1 MGMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPG 60
G++++PTREL+ QI + +++ V+S ++VGG+++ + + ++ ++++ TPG
Sbjct: 118 FGLVLAPTRELAYQISKSFESLGASM-GVRSCVIVGGMDMVSQSISLGKK-PHIIVATPG 175
Query: 61 RLYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEA 120
RL D +E RNL+ LV+DEADRLLDM F + I+ LP+ RRT LFSAT +
Sbjct: 176 RLLDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPLLDKILKVLPRERRTFLFSATMSSK 235
Query: 121 VEELSKAGLRNPVRVEVRAESKSHHVS 147
VE L +A L NP+RV V + SK VS
Sbjct: 236 VESLQRASLSNPLRVSV-STSKYQTVS 261
>gi|307109210|gb|EFN57448.1| hypothetical protein CHLNCDRAFT_142930 [Chlorella variabilis]
Length = 576
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 90/137 (65%), Gaps = 3/137 (2%)
Query: 2 GMIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGR 61
++I PTREL+ QIY+VA+ + L++GG +A+ +K+ + G NLL+ TPGR
Sbjct: 178 AVVILPTRELALQIYNVARDVMQHHTQTHG-LVMGGANRRAEAEKLVK-GVNLLVSTPGR 235
Query: 62 LYDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAV 121
L D ++ +RNL LV+DEADR+L++GF++++ I+ LPK R+T LFSATQT V
Sbjct: 236 LLDHLQNTKGFVYRNLACLVIDEADRILEIGFEEEMRQIVKILPKDRQTMLFSATQTTKV 295
Query: 122 EELSKAGL-RNPVRVEV 137
E+L++ R P+ V +
Sbjct: 296 EDLARLSFKRKPLYVGI 312
>gi|71022263|ref|XP_761361.1| hypothetical protein UM05214.1 [Ustilago maydis 521]
gi|74699927|sp|Q4P3U9.1|RRP3_USTMA RecName: Full=ATP-dependent rRNA helicase RRP3
gi|46097669|gb|EAK82902.1| hypothetical protein UM05214.1 [Ustilago maydis 521]
Length = 551
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 85/134 (63%), Gaps = 2/134 (1%)
Query: 4 IISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRLY 63
+++PTREL+ QI + ST+ V+S +VGG+++ + + + ++++ TPGRL
Sbjct: 177 VLAPTRELAYQISQQVEALGSTI-GVRSATIVGGMDMMSQSIALSKR-PHVIVATPGRLQ 234
Query: 64 DIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVEE 123
D +E R L+ LV+DEADRLLDM F I ++ +P+ RRT LFSAT T V +
Sbjct: 235 DHLENTKGFSLRGLQYLVMDEADRLLDMDFGPIIDKLLQSIPRERRTMLFSATMTTKVAK 294
Query: 124 LSKAGLRNPVRVEV 137
L +A L+NPVRVEV
Sbjct: 295 LQRASLKNPVRVEV 308
>gi|391340364|ref|XP_003744512.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX18-like [Metaseiulus occidentalis]
Length = 557
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 93/149 (62%), Gaps = 5/149 (3%)
Query: 3 MIISPTRELSSQIYHVAQPFISTLPDVKSVLLVGGVEVKADVKKIEEEGANLLIGTPGRL 62
++I+PTREL+ Q + V + + L++GG ++ +K+ + G N+LI TPGRL
Sbjct: 153 LVITPTRELAMQTFGVLKELLQFHQQTFG-LIMGGTNRNSEAEKLNK-GVNILIATPGRL 210
Query: 63 YDIMERMDVLDFRNLEILVLDEADRLLDMGFQKQISYIISRLPKLRRTGLFSATQTEAVE 122
D ++ +NL+ L++DEADR+LD+GF++++ II LPK R+T LFSATQT+ E
Sbjct: 211 LDHLQNTKNFVIKNLQCLIIDEADRILDIGFEEEMKQIIHLLPKRRQTMLFSATQTKKTE 270
Query: 123 ELSKAGLRN-PVRVEVRAESKSHHVSASS 150
EL++ L+ P+ V + E K H + +
Sbjct: 271 ELARVALKTEPITVGI--EEKEEHATVAG 297
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.135 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,499,545,708
Number of Sequences: 23463169
Number of extensions: 90459744
Number of successful extensions: 398023
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 20309
Number of HSP's successfully gapped in prelim test: 4867
Number of HSP's that attempted gapping in prelim test: 335862
Number of HSP's gapped (non-prelim): 25862
length of query: 183
length of database: 8,064,228,071
effective HSP length: 133
effective length of query: 50
effective length of database: 9,238,593,890
effective search space: 461929694500
effective search space used: 461929694500
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 72 (32.3 bits)