Query 030096
Match_columns 183
No_of_seqs 154 out of 1162
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 13:29:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030096.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030096hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s57_A Alpha-ketoglutarate-dep 100.0 5.1E-36 1.7E-40 243.4 11.7 136 38-177 11-149 (204)
2 2iuw_A Alkylated repair protei 100.0 1.5E-32 5.1E-37 227.6 12.1 145 26-176 28-174 (238)
3 3i3q_A Alpha-ketoglutarate-dep 99.9 1.2E-25 4.2E-30 183.3 10.9 134 32-175 4-150 (211)
4 3tht_A Alkylated DNA repair pr 99.9 7.3E-25 2.5E-29 190.2 12.0 134 27-175 103-242 (345)
5 3lfm_A Protein FTO; FAT MASS a 99.6 8E-16 2.7E-20 135.7 6.5 118 43-163 44-237 (495)
6 2jig_A Prolyl-4 hydroxylase; h 88.2 4.2 0.00014 31.9 9.8 98 28-149 13-118 (224)
7 3dkq_A PKHD-type hydroxylase S 87.8 0.82 2.8E-05 37.2 5.5 36 32-68 14-49 (243)
8 3itq_A Prolyl 4-hydroxylase, a 83.8 5.6 0.00019 31.5 8.4 101 26-150 28-132 (216)
9 3gja_A CYTC3; halogenase, beta 61.8 14 0.00047 30.6 5.7 23 38-60 24-46 (319)
10 2k5c_A Uncharacterized protein 46.5 17 0.00058 24.8 3.1 35 37-71 57-94 (95)
11 2fct_A Syringomycin biosynthes 36.8 26 0.00088 28.3 3.4 24 38-61 22-45 (313)
12 3kt7_A PKHD-type hydroxylase T 23.1 1.2E+02 0.0041 27.9 5.5 30 38-67 35-64 (633)
13 3pvj_A Alpha-ketoglutarate-dep 20.9 62 0.0021 26.0 2.9 41 46-86 211-260 (277)
No 1
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=100.00 E-value=5.1e-36 Score=243.39 Aligned_cols=136 Identities=30% Similarity=0.505 Sum_probs=123.9
Q ss_pred cEEEeCCCCCHHHHHHHHHHHhhcCCC---CCceeeecCCcccccceeeEecCCCCcceeccCCCCCCCCCCCCchHHHH
Q 030096 38 EVIYFPRIIKMEDSWKFFDYLNNRIPW---NRPTIRVFGRSCLQPRDTCYVASEGVTQLIYSGYRPHPYSWDDFPPLKDI 114 (183)
Q Consensus 38 ~~~~~~~fl~~~~a~~L~~~L~~~~~w---~~~~~~~~Gk~~~~pR~~~wy~~~~~~~Y~Ysg~~~~~~~wp~~P~ll~l 114 (183)
-..++++||++++|+.||+.|.++++| +|.++.||||.+.+||+++||++.+. .|+|+|..+.+.+|| |.|..+
T Consensus 11 ~~~~~~~~l~~~~a~~l~~~l~~~~~w~~~~~~~~~~~gk~~~~pR~~~wyg~~~~-~Y~Ysg~~~~~~pwp--~~L~~l 87 (204)
T 3s57_A 11 LDSSYTVLFGKAEADEIFQELEKEVEYFTGALARVQVFGKWHSVPRKQATYGDAGL-TYTFSGLTLSPKPWI--PVLERI 87 (204)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHHCCCCCGGGGEEEETTEEEECSSEEEEEECTTC-CEEETTEEECCEECC--HHHHHH
T ss_pred ceEEecCcCCHHHHHHHHHHHHHhCCCCCcccceEEECCeEeccCcEEEEECCCCC-CcccCCCcccCCCCC--HHHHHH
Confidence 467799999999999999999999999 78899999999999999999999888 699999999899998 677776
Q ss_pred HHHHHhhcCCCCCcEEEEceeCCCCCCccccccCCCCcCCCCcEEEEEcCCceeeEEeeCCCC
Q 030096 115 LDIVLKVLPGSRFNSLLLNRYKGGNDYVGWHADDEKLYGSTPEIASVSFGCERDFLLKIKPSK 177 (183)
Q Consensus 115 ~~~~~e~~~g~~fn~~LvN~Y~~G~d~ig~HsD~e~~lg~~~~IasvSLGa~R~F~~r~k~~~ 177 (183)
. +.+++.++..||+||||+|++|.|+||||+|++..++.+++|||||||++|.|.|+++.++
T Consensus 88 ~-~~~~~~~g~~~n~~LvN~Y~~G~d~i~~H~D~~~~~~~~~~IasvSLG~~~~f~~~~~~~~ 149 (204)
T 3s57_A 88 R-DHVSGVTGQTFNFVLINRYKDGSDHICEHRDDERELAPGSPIASVSFGASRDFVFRHKDSR 149 (204)
T ss_dssp H-HHHHHHHCCCCSEEEEEEESSTTCCEEEECCCCTTBCTTCCEEEEEEESCEEEEEEEGGGC
T ss_pred H-HHHHHHhCCCCceeEEEEECCCCCcccceecChhhccCCCcEEEEECCCceEEEEEEcCCC
Confidence 4 4446678999999999999999889999999999999999999999999999999997644
No 2
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=99.98 E-value=1.5e-32 Score=227.63 Aligned_cols=145 Identities=31% Similarity=0.527 Sum_probs=125.2
Q ss_pred ccceEEeCCCC-ccEEEeCCCCCHHHHHHHHHHHhhcCCCCCceeeecCCcccccceeeEecCCCCcceeccCCCCCCC-
Q 030096 26 KQRMVVDLGNG-SEVIYFPRIIKMEDSWKFFDYLNNRIPWNRPTIRVFGRSCLQPRDTCYVASEGVTQLIYSGYRPHPY- 103 (183)
Q Consensus 26 ~~~~~~~l~~~-~~~~~~~~fl~~~~a~~L~~~L~~~~~w~~~~~~~~Gk~~~~pR~~~wy~~~~~~~Y~Ysg~~~~~~- 103 (183)
+..++..++.+ .++.|+++||++++++.||+.|.++++|++....+||+.+.++|+++||++ . .|.|+|....+.
T Consensus 28 g~~~~~~~p~~i~gl~~~~~fl~~~e~~~Ll~~l~~~~~w~~~~~~~~g~~~~~~R~~~~~g~--~-~Y~Ys~~~~~~~p 104 (238)
T 2iuw_A 28 GVYEISLSPTGVSRVCLYPGFVDVKEADWILEQLCQDVPWKQRTGIREDITYQQPRLTAWYGE--L-PYTYSRITMEPNP 104 (238)
T ss_dssp EEEEEECCSSSCEEEEEETTSSCHHHHHHHHHHHHHHSCCBCCEEESSSCEEECSSEEEEEEC--C-CTTSCHHHHCCBS
T ss_pred cceeeecCCCCCCcEEEECCCCCHHHHHHHHHHHHHhCCCccCceecCCcccccCCeeEEcCC--C-ccccCCcccCCCC
Confidence 44555556653 369999999999999999999999999999998999999999999999995 3 599998877676
Q ss_pred CCCCCchHHHHHHHHHhhcCCCCCcEEEEceeCCCCCCccccccCCCCcCCCCcEEEEEcCCceeeEEeeCCC
Q 030096 104 SWDDFPPLKDILDIVLKVLPGSRFNSLLLNRYKGGNDYVGWHADDEKLYGSTPEIASVSFGCERDFLLKIKPS 176 (183)
Q Consensus 104 ~wp~~P~ll~l~~~~~e~~~g~~fn~~LvN~Y~~G~d~ig~HsD~e~~lg~~~~IasvSLGa~R~F~~r~k~~ 176 (183)
+|| |.|..+...+ ++.++..||+||||+|++|+|+|+||+|++..++++++|||||||++|.|.|+++..
T Consensus 105 ~wp--~~l~~l~~~~-~~~~g~~~n~~LvN~Y~~G~d~i~~H~D~~~~~~~~~~IaslSLG~~~~f~f~~~~~ 174 (238)
T 2iuw_A 105 HWH--PVLRTLKNRI-EENTGHTFNSLLCNLYRNEKDSVDWHSDDEPSLGRCPIIASLSFGATRTFEMRKKPP 174 (238)
T ss_dssp SCC--HHHHHHHHHH-HHHHSCCCCEEEEEEECSTTCCEEEECCCCGGGCSSCCEEEEEEESCEEEEEEECCC
T ss_pred CCC--HHHHHHHHHH-HHHhCCCCCEEEEEEECCCCCceeCCcCChhhcCCCCcEEEEECCCCEEEEEeccCC
Confidence 798 5666654444 556688999999999999988999999999999999999999999999999999765
No 3
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=99.93 E-value=1.2e-25 Score=183.28 Aligned_cols=134 Identities=19% Similarity=0.276 Sum_probs=104.4
Q ss_pred eCCCCccEEEeCCCCCHHHHHHHHHHHhhcCCCCCc--eeeecCCccccccee-----eEecCCCCcceeccCCC-CCCC
Q 030096 32 DLGNGSEVIYFPRIIKMEDSWKFFDYLNNRIPWNRP--TIRVFGRSCLQPRDT-----CYVASEGVTQLIYSGYR-PHPY 103 (183)
Q Consensus 32 ~l~~~~~~~~~~~fl~~~~a~~L~~~L~~~~~w~~~--~~~~~Gk~~~~pR~~-----~wy~~~~~~~Y~Ysg~~-~~~~ 103 (183)
.|++ ++.++|+|+. +++++|++.|+ ++.|.++ ...+.|...+++|++ +||++.. .|+|+|.. +.+.
T Consensus 4 ~~~~--g~~~~~~~~~-~~~~~l~~~~~-~~~~~~p~~~~~~pgg~~~s~~~~~~g~~~W~~d~~--~Y~Ys~~~~~~~~ 77 (211)
T 3i3q_A 4 PLAA--GAVILRRFAF-NAAEQLIRDIN-DVASQSPFRQMVTPGGYTMSVAMTNCGHLGWTTHRQ--GYLYSPIDPQTNK 77 (211)
T ss_dssp CCBT--TBEEETTTTT-TTHHHHHHHHH-HHHHHSCCBCCBCTTSCBCSSEEEEESSBEEEEETT--EEEEESBCTTTSS
T ss_pred ecCC--CCEEECCcCh-HHHHHHHHHHH-HHHhcCCCceeEcCCCCcCchhhcccccceeecCCC--CcCcCCCccCCCC
Confidence 4555 4899999998 57889999985 4445443 334567788888998 8999874 69999988 6778
Q ss_pred CCCCCch-HHHHHHHHHhhcCC---CCCcEEEEceeCCCCCCcccccc-CCCCcCCCCcEEEEEcCCceeeEEeeCC
Q 030096 104 SWDDFPP-LKDILDIVLKVLPG---SRFNSLLLNRYKGGNDYVGWHAD-DEKLYGSTPEIASVSFGCERDFLLKIKP 175 (183)
Q Consensus 104 ~wp~~P~-ll~l~~~~~e~~~g---~~fn~~LvN~Y~~G~d~ig~HsD-~e~~lg~~~~IasvSLGa~R~F~~r~k~ 175 (183)
+|+++|. |.+++.++. +..+ ..+|+||||+|++|+ +|+||+| +|..++ ++|||||||++|.|.|+++.
T Consensus 78 pw~~~P~~L~~l~~~~~-~~~g~~~~~pn~~LvN~Y~~G~-~i~~H~D~~e~~~~--~pI~svSLG~~~~f~f~~~~ 150 (211)
T 3i3q_A 78 PWPAMPQSFHNLCQRAA-TAAGYPDFQPDACLINRYAPGA-KLSLHQDKDEPDLR--APIVSVSLGLPAIFQFGGLK 150 (211)
T ss_dssp BCCCCCHHHHHHHHHHH-HHTTCTTCCCCEEEEEEECTTC-CEEEECCCCCSCTT--SCEEEEEEESCEEEEECCSS
T ss_pred CCCchHHHHHHHHHHHH-HhcCCCCcCCCEEEEEEEcCCC-CcccccCCCccccC--CCEEEEECCCCeEEEEeccc
Confidence 9997776 555544453 3344 356999999999985 9999999 787776 56999999999999999863
No 4
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=99.92 E-value=7.3e-25 Score=190.22 Aligned_cols=134 Identities=19% Similarity=0.221 Sum_probs=86.1
Q ss_pred cceEEeCCCCccEEEeCCCCCHHHHHHHHHHHhhcCCCCCceeeecCCcccccceeeEecCCCCcceeccCCCCC-----
Q 030096 27 QRMVVDLGNGSEVIYFPRIIKMEDSWKFFDYLNNRIPWNRPTIRVFGRSCLQPRDTCYVASEGVTQLIYSGYRPH----- 101 (183)
Q Consensus 27 ~~~~~~l~~~~~~~~~~~fl~~~~a~~L~~~L~~~~~w~~~~~~~~Gk~~~~pR~~~wy~~~~~~~Y~Ysg~~~~----- 101 (183)
...+..|++| +.|+|+||++++++ .|.++++|.+..+.++|+.+..+|+++|||- .|+|++..+.
T Consensus 103 ~~~~~~lp~G--l~~~p~fis~~Ee~----~Ll~~i~w~~~~~~~~~~~~l~~Rr~~~yG~----~Y~Ys~~~~~~~~p~ 172 (345)
T 3tht_A 103 ELRPQALPPG--LMVVEEIISSEEEK----MLLESVDWTEDTDNQNSQKSLKHRRVKHFGY----EFHYENNNVDKDKPL 172 (345)
T ss_dssp EEECCSCCTT--EEEETTCSCHHHHH----HHHTTCC----------------CEEECCC--------------------
T ss_pred ccccccCCCc--eEEEcCcCCHHHHH----HHHHhcccCCccccccCcccccCceEEEECC----cccccccccccCCCC
Confidence 3445677775 99999999999987 4567788999999999999999999999993 6999987765
Q ss_pred CCCCCCCchHHHHHHHHH-hhcCCCCCcEEEEceeCCCCCCccccccCCCCcCCCCcEEEEEcCCceeeEEeeCC
Q 030096 102 PYSWDDFPPLKDILDIVL-KVLPGSRFNSLLLNRYKGGNDYVGWHADDEKLYGSTPEIASVSFGCERDFLLKIKP 175 (183)
Q Consensus 102 ~~~wp~~P~ll~l~~~~~-e~~~g~~fn~~LvN~Y~~G~d~ig~HsD~e~~lg~~~~IasvSLGa~R~F~~r~k~ 175 (183)
+.+|| +.|..++.++. +...+..||+||||+|++| ++|+||+|++..++ ++|||||||++|.|.|+++.
T Consensus 173 p~~~P--~~L~~l~~r~~~~~~~~~~~n~~lvN~Y~~G-~~I~~H~D~~~~~~--~~I~slSLG~~~~f~f~~~~ 242 (345)
T 3tht_A 173 SGGLP--DICESFLEKWLRKGYIKHKPDQMTINQYEPG-QGIPAHIDTHSAFE--DEIVSLSLGSEIVMDFKHPD 242 (345)
T ss_dssp --CCC--HHHHHHHHHHHHHTSCSSCCSEEEEEEECTT-CCEEEECCCTTTBC--SCEEEEEESSCEEEEEECTT
T ss_pred CcCcC--HHHHHHHHHHHhcccCCCCCCEEEEEEecCC-CCEeeccCCchhcC--CeEEEEECCCceeEEEccCC
Confidence 45676 45666655553 2356788999999999997 59999999988776 78999999999999999864
No 5
>3lfm_A Protein FTO; FAT MASS and obesity associated (FTO) protein, Fe2+/2-oxoGlu (2-OG)-dependent oxidative DNA/RNA demethylases, oxidoreduc; HET: 3DT OGA; 2.50A {Homo sapiens}
Probab=99.60 E-value=8e-16 Score=135.71 Aligned_cols=118 Identities=22% Similarity=0.325 Sum_probs=90.2
Q ss_pred CCCCCHH---HHHHHHHHHhhcCCCCCceeeecCCcccccceeeEecCCCCcceeccCCCCCCCCCCCC--------chH
Q 030096 43 PRIIKME---DSWKFFDYLNNRIPWNRPTIRVFGRSCLQPRDTCYVASEGVTQLIYSGYRPHPYSWDDF--------PPL 111 (183)
Q Consensus 43 ~~fl~~~---~a~~L~~~L~~~~~w~~~~~~~~Gk~~~~pR~~~wy~~~~~~~Y~Ysg~~~~~~~wp~~--------P~l 111 (183)
++-|+.+ +.+++|+.|.++++|+|+.++||||.+.+||++||||+.+. .|+|||..+.+.||++- |.+
T Consensus 44 a~slp~~LH~~vd~lF~~Ll~ei~WqQD~IrIfGK~v~tPRLtAWyGD~g~-tY~YSGi~l~p~PWTp~~~~~~~~~~~~ 122 (495)
T 3lfm_A 44 ASSVSEELHKEVQEAFLTLHKHGCLFRDLVRIQGKDLLTPVSRILIGNPGC-TYKYLNTRLFTVPWPVKGSNIKHTEAEI 122 (495)
T ss_dssp GGGSCHHHHHHHHHHHHHHHHTTCCBCCEECGGGCCEECSSEEEEEESTTB-EEEETTEEEECEECCCC--------CHH
T ss_pred cccCCHHHHHHHHHHHHHHHhcCCCCCCchhcCCceeccceeEEEecCCCC-ceecCCCcccCCCCCcccCcccccChhH
Confidence 3456654 68889999999999999999999999999999999999999 69999999999999841 222
Q ss_pred HHHHHH--------------HHhhc-----------------------CC--------------CCCcEEEEceeCC---
Q 030096 112 KDILDI--------------VLKVL-----------------------PG--------------SRFNSLLLNRYKG--- 137 (183)
Q Consensus 112 l~l~~~--------------~~e~~-----------------------~g--------------~~fn~~LvN~Y~~--- 137 (183)
...++. +++++ .| ..||+.|||+.+.
T Consensus 123 ~~a~~a~~~LNd~l~~~t~~~l~~l~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~fNvTLlN~Mdp~~m 202 (495)
T 3lfm_A 123 AAACETFLKLNDYLQIETIQALEELAAKEKANEDAVPLCMSADFPRVGMGSSYNGQDEVDIKSRAAYNVTLLNFMDPQKM 202 (495)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHC-----------------------------CHHHHHHHTCCCEEEEEEECSSCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccccccCCCcccCCcccccccCcceeehhhhhccCcccc
Confidence 211110 11110 01 2799999998654
Q ss_pred -----------CCCCccccccCCCCcCCCCcEEEEEc
Q 030096 138 -----------GNDYVGWHADDEKLYGSTPEIASVSF 163 (183)
Q Consensus 138 -----------G~d~ig~HsD~e~~lg~~~~IasvSL 163 (183)
|+-+|+||+|... ...++||+.|.
T Consensus 203 ~~LKeEpyfgMGKmaVsWHhDenL--~~~StVAVY~~ 237 (495)
T 3lfm_A 203 PYLKEEPYFGMGKMAVSWHHDENL--VDRSAVAVYSY 237 (495)
T ss_dssp SSCCBCSSSCCCBEEEEEECCCSB--CTTCCEEEEEE
T ss_pred cccccccccCCcceeeeecccccc--ccCcceEEEEe
Confidence 5667899999864 57889999885
No 6
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=88.20 E-value=4.2 Score=31.87 Aligned_cols=98 Identities=12% Similarity=0.088 Sum_probs=53.9
Q ss_pred ceEEeCCCCccEEEeCCCCCHHHHHHHHHHHhhcCCCCCceeeec--CCccc-ccce--eeEecCCCCcceeccCCCCCC
Q 030096 28 RMVVDLGNGSEVIYFPRIIKMEDSWKFFDYLNNRIPWNRPTIRVF--GRSCL-QPRD--TCYVASEGVTQLIYSGYRPHP 102 (183)
Q Consensus 28 ~~~~~l~~~~~~~~~~~fl~~~~a~~L~~~L~~~~~w~~~~~~~~--Gk~~~-~pR~--~~wy~~~~~~~Y~Ysg~~~~~ 102 (183)
.+++.+.+ .+.++++||+++|++.|.+.+... +.+..+.-. |+... .-|. .+|....
T Consensus 13 ~e~ls~~P--~i~~~~~fLs~~Ec~~li~~~~~~--~~~s~v~~~~~g~~~~~~~R~s~~~~l~~~-------------- 74 (224)
T 2jig_A 13 VVHLSWSP--RAFLLKNFLSDEECDYIVEKARPK--MVKSSVVDNESGKSVDSEIRTSTGTWFAKG-------------- 74 (224)
T ss_dssp EEEEETTT--TEEEETTCSCHHHHHHHHHHHGGG--CEECEEEETTTTEEEECSSBCSEEEECCTT--------------
T ss_pred eEEEeCCC--CEEEEcccCCHHHHHHHHHHhhcc--CeeeeeecCCCCcccccCCEEEeeeEecCC--------------
Confidence 34455544 699999999999999998887652 333332110 11110 0111 1122110
Q ss_pred CCCCCCchHHHHHHHHHhhcCCCC---CcEEEEceeCCCCCCccccccCC
Q 030096 103 YSWDDFPPLKDILDIVLKVLPGSR---FNSLLLNRYKGGNDYVGWHADDE 149 (183)
Q Consensus 103 ~~wp~~P~ll~l~~~~~e~~~g~~---fn~~LvN~Y~~G~d~ig~HsD~e 149 (183)
..|.+..+..++ +..++.. .....+..|..| ..-.+|.|..
T Consensus 75 ----~~~~~~~i~~ri-~~~~gl~~~~~e~~qv~rY~~G-~~y~~H~D~~ 118 (224)
T 2jig_A 75 ----EDSVISKIEKRV-AQVTMIPLENHEGLQVLHYHDG-QKYEPHYDYF 118 (224)
T ss_dssp ----CSHHHHHHHHHH-HHHHTCCGGGBCCCEEEEEETT-CCEEEECCSS
T ss_pred ----CCHHHHHHHHHH-HHHhCCCcccccceEEEecCCC-ccccCcccCC
Confidence 013444443333 4445543 334778899997 5789999964
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=87.77 E-value=0.82 Score=37.19 Aligned_cols=36 Identities=14% Similarity=0.225 Sum_probs=27.5
Q ss_pred eCCCCccEEEeCCCCCHHHHHHHHHHHhhcCCCCCce
Q 030096 32 DLGNGSEVIYFPRIIKMEDSWKFFDYLNNRIPWNRPT 68 (183)
Q Consensus 32 ~l~~~~~~~~~~~fl~~~~a~~L~~~L~~~~~w~~~~ 68 (183)
.|--+..+..+++||+++|+++|.+.+ +..+|....
T Consensus 14 ~~~~~~~i~~i~dvLs~~Ec~~li~~~-e~~~~~dg~ 49 (243)
T 3dkq_A 14 NLYFQGMLIEIPNVFSKQEVSHLREQL-DARRWIDGN 49 (243)
T ss_dssp CCCCBTTBEEECCSSCHHHHHHHHHHH-HTSCCEEEC
T ss_pred ccccCCCEEEECCCCCHHHHHHHHHHH-hhCCCccCc
Confidence 344455789999999999999998877 556786543
No 8
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=83.76 E-value=5.6 Score=31.51 Aligned_cols=101 Identities=10% Similarity=0.059 Sum_probs=56.3
Q ss_pred ccceEEeCCCCccEEEeCCCCCHHHHHHHHHHHhhcCCCCCceeeecCCcccccceeeEecCCCCcceeccCCCCCCCCC
Q 030096 26 KQRMVVDLGNGSEVIYFPRIIKMEDSWKFFDYLNNRIPWNRPTIRVFGRSCLQPRDTCYVASEGVTQLIYSGYRPHPYSW 105 (183)
Q Consensus 26 ~~~~~~~l~~~~~~~~~~~fl~~~~a~~L~~~L~~~~~w~~~~~~~~Gk~~~~pR~~~wy~~~~~~~Y~Ysg~~~~~~~w 105 (183)
+.+.+..+.....+.++.+||+++|++.|.+..... +++..+. .+.... .++-|... |
T Consensus 28 r~v~v~~l~~~P~i~~~~~fLs~~Ec~~Li~~a~~~--l~~s~v~-~~~~~~--------------~~RtS~~~-----w 85 (216)
T 3itq_A 28 REIQIISKFEEPLIVVLGNVLSDEECDELIELSKSK--LARSKVG-SSRDVN--------------DIRTSSGA-----F 85 (216)
T ss_dssp CEEEEEEEETTTTEEEEESCSCHHHHHHHHHHHHHH--HC---------CCC--------------CGGGTTCE-----E
T ss_pred ceEEEEEeeCCCCEEEECCcCCHHHHHHHHHHhhcc--cccceec-cCCccC--------------CcEeeeeE-----E
Confidence 344555565555799999999999999998876543 3332221 010000 12222111 1
Q ss_pred CC-CchHHHHHHHHHhhcCCCC---CcEEEEceeCCCCCCccccccCCC
Q 030096 106 DD-FPPLKDILDIVLKVLPGSR---FNSLLLNRYKGGNDYVGWHADDEK 150 (183)
Q Consensus 106 p~-~P~ll~l~~~~~e~~~g~~---fn~~LvN~Y~~G~d~ig~HsD~e~ 150 (183)
-. .|.+..+.+++ ...+|.. ....-+..|..| ..-.+|.|...
T Consensus 86 l~~~~~v~~i~~Ri-~~~~gl~~~~~E~lqv~~Y~~G-~~y~~H~D~~~ 132 (216)
T 3itq_A 86 LDDNELTAKIEKRI-SSIMNVPASHGEGLHILNYEVD-QQYKAHYDYFA 132 (216)
T ss_dssp CCCCHHHHHHHHHH-HHHHTSCGGGBCCCEEEEECBT-CCEEEECSSCC
T ss_pred eCCcHHHHHHHHHH-HHhcCceeccccceeEEEeCCC-CccccccCCCc
Confidence 11 13454444444 4466654 234678889997 57799999754
No 9
>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A*
Probab=61.80 E-value=14 Score=30.62 Aligned_cols=23 Identities=13% Similarity=0.124 Sum_probs=19.7
Q ss_pred cEEEeCCCCCHHHHHHHHHHHhh
Q 030096 38 EVIYFPRIIKMEDSWKFFDYLNN 60 (183)
Q Consensus 38 ~~~~~~~fl~~~~a~~L~~~L~~ 60 (183)
+..+++++|++++.++|.+.+..
T Consensus 24 Gyv~i~~~l~~~~v~~l~~~i~~ 46 (319)
T 3gja_A 24 GYIGPVKIFEPEEMTRRWNIIRR 46 (319)
T ss_dssp SEEEEEESSCHHHHHHHHHHHHH
T ss_pred CEEECcCCCCHHHHHHHHHHHHH
Confidence 48889999999999988888765
No 10
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=46.47 E-value=17 Score=24.82 Aligned_cols=35 Identities=17% Similarity=0.508 Sum_probs=28.8
Q ss_pred ccEEEeCCCCCHHHHHHHHHHHhh---cCCCCCceeee
Q 030096 37 SEVIYFPRIIKMEDSWKFFDYLNN---RIPWNRPTIRV 71 (183)
Q Consensus 37 ~~~~~~~~fl~~~~a~~L~~~L~~---~~~w~~~~~~~ 71 (183)
++-.++...|+..+|...|+-|-+ .++|...++++
T Consensus 57 CgEEFyG~~Lp~~EaeKVFELLNdFkGsIDwenkkVrl 94 (95)
T 2k5c_A 57 CGEEFYGKTLPRREAEKVFELLNDFKGGIDWENKRVKL 94 (95)
T ss_dssp TCCEEETTSSCTTTHHHHHHHHHSCSSSCBTTTTBCCC
T ss_pred ccHHHhcccCChHHHHHHHHHHHHccCccccccceeec
Confidence 457889999999999999998864 48999887754
No 11
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=36.78 E-value=26 Score=28.29 Aligned_cols=24 Identities=13% Similarity=-0.122 Sum_probs=19.5
Q ss_pred cEEEeCCCCCHHHHHHHHHHHhhc
Q 030096 38 EVIYFPRIIKMEDSWKFFDYLNNR 61 (183)
Q Consensus 38 ~~~~~~~fl~~~~a~~L~~~L~~~ 61 (183)
++..++++|++++.++|.+.+...
T Consensus 22 Gyvvl~~~l~~e~v~~l~~~~~~~ 45 (313)
T 2fct_A 22 GFIGPFDAYSPEEMKETWKRTRLR 45 (313)
T ss_dssp SEEEEEESSCHHHHHHHHHHHHHH
T ss_pred CEEECCCCCCHHHHHHHHHHHHHH
Confidence 488899999999988887776543
No 12
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=23.14 E-value=1.2e+02 Score=27.92 Aligned_cols=30 Identities=3% Similarity=-0.010 Sum_probs=24.3
Q ss_pred cEEEeCCCCCHHHHHHHHHHHhhcCCCCCc
Q 030096 38 EVIYFPRIIKMEDSWKFFDYLNNRIPWNRP 67 (183)
Q Consensus 38 ~~~~~~~fl~~~~a~~L~~~L~~~~~w~~~ 67 (183)
....+++||+.+.+..+.+.+.+.+.|...
T Consensus 35 pH~VIdnfl~d~lle~V~~Efp~~i~f~~K 64 (633)
T 3kt7_A 35 NWGTIHELVNDDLLRAVRKEIETEIHFTKK 64 (633)
T ss_dssp CCEEESSCBCHHHHHHHHHHHHHHCCCEEE
T ss_pred ceEEECCCCCHHHHHHHHHHhhhccCcccc
Confidence 456789999988888888888877888654
No 13
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=20.93 E-value=62 Score=25.97 Aligned_cols=41 Identities=10% Similarity=0.080 Sum_probs=31.4
Q ss_pred CCHHHHHHHHHHHhhc---------CCCCCceeeecCCcccccceeeEec
Q 030096 46 IKMEDSWKFFDYLNNR---------IPWNRPTIRVFGRSCLQPRDTCYVA 86 (183)
Q Consensus 46 l~~~~a~~L~~~L~~~---------~~w~~~~~~~~Gk~~~~pR~~~wy~ 86 (183)
++.+|+..|++.|.+. ..|+...+-|+++.+...+.+..|.
T Consensus 211 l~~~es~~ll~~L~~~~~~pe~~~r~~W~~GDlviwDNr~~lH~a~~d~~ 260 (277)
T 3pvj_A 211 LSELESDALLRLLFAHATRPEFSIRWRWQENDVAFWDNRVTQHFAVDDYR 260 (277)
T ss_dssp SCHHHHHHHHHHHHHHHTSGGGEEEECCCTTCEEEEETTSEEEEECCCCT
T ss_pred CCHHHHHHHHHHHHHHHhCCCcEEEEeeCCCCEEEEeCCceeeeccCCCC
Confidence 5778999999998763 3698888888888777766666554
Done!