Query 030100
Match_columns 183
No_of_seqs 230 out of 1184
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 13:35:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030100.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030100hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2foj_A Ubiquitin carboxyl-term 100.0 3.3E-28 1.1E-32 182.0 11.4 117 65-182 16-151 (155)
2 3ivv_A Speckle-type POZ protei 99.9 8.6E-27 3E-31 172.6 9.0 112 64-180 7-144 (145)
3 4gjh_A TNF receptor-associated 99.9 1.1E-25 3.8E-30 172.2 7.1 118 64-181 20-175 (178)
4 1d00_A Tumor necrosis factor r 99.9 2.4E-25 8.3E-30 168.4 7.2 115 65-180 16-167 (168)
5 1ca9_A TRAF2, protein (TNF rec 99.9 6.6E-25 2.2E-29 169.7 6.8 115 65-180 40-191 (192)
6 2gkw_A TNF receptor-associated 99.9 4.8E-24 1.6E-28 165.0 6.3 114 65-180 37-188 (192)
7 1lb6_A TNF receptor-associated 99.9 4E-23 1.4E-27 155.2 10.2 99 80-180 44-157 (160)
8 4ghu_A TNF receptor-associated 99.9 8.6E-24 3E-28 164.4 6.0 115 64-180 36-188 (198)
9 1flk_A TNF receptor associated 99.9 1.9E-23 6.3E-28 165.8 5.9 115 65-181 73-225 (228)
10 3hqi_A Speckle-type POZ protei 99.9 1.7E-22 6E-27 166.2 10.3 109 67-180 6-140 (312)
11 2f1z_A Ubiquitin carboxyl-term 99.9 2.2E-22 7.6E-27 176.4 8.6 115 65-180 28-161 (522)
12 4gwm_A Meprin A subunit beta; 99.2 8.6E-11 2.9E-15 104.0 9.9 110 64-180 402-567 (592)
13 2foj_A Ubiquitin carboxyl-term 98.7 3.5E-09 1.2E-13 78.3 2.4 43 4-46 105-147 (155)
14 3ivv_A Speckle-type POZ protei 98.3 1.3E-07 4.5E-12 68.9 0.8 36 11-46 107-142 (145)
15 3hqi_A Speckle-type POZ protei 98.0 1.7E-06 5.8E-11 70.5 2.1 44 3-47 96-140 (312)
16 2f1z_A Ubiquitin carboxyl-term 98.0 1.7E-06 5.9E-11 75.4 1.4 44 3-46 116-159 (522)
17 4gwm_A Meprin A subunit beta; 87.4 0.2 7E-06 44.3 1.7 36 12-49 533-569 (592)
No 1
>2foj_A Ubiquitin carboxyl-terminal hydrolase 7; MATH domain, hydrolase; 1.60A {Homo sapiens} PDB: 1yze_A 1yy6_A 2foo_A 2fop_A 3mqr_A 3mqs_C 2f1w_A 2f1x_A 2f1y_A 2xxn_A
Probab=99.95 E-value=3.3e-28 Score=182.00 Aligned_cols=117 Identities=20% Similarity=0.274 Sum_probs=98.0
Q ss_pred CCCcEEEEEEcCccc-----------------eeeEeeCCCCC-CCCCeEEEEEEecCCCCCCCCCeEEEEEEEEEEcCC
Q 030100 65 ASNYKHVWKIENFSK-----------------KIKLYPKGQGV-GRGSHISVYLALADLSTITRDSKIYVHFTLRIRDQV 126 (183)
Q Consensus 65 ~~~~~~~W~I~nfS~-----------------~l~~yP~G~~~-~~~~~lSlyL~l~~~~~~~~~w~i~~~f~l~ll~q~ 126 (183)
...++|+|+|+|||. +|++||+|+.. +.++||||||+|.. +..+.+|++.|+|+|+|+||+
T Consensus 16 ~~~~~~~w~I~nfS~~~~~~~S~~f~~gg~~W~i~~yP~G~~~~~~~~~lSlyL~~~~-~~~~~~w~v~a~~~l~l~~~~ 94 (155)
T 2foj_A 16 RSEATFQFTVERFSRLSESVLSPPCFVRNLPWKIMVMPRFYPDRPHQKSVGFFLQCNA-ESDSTSWSCHAQAVLKIINYR 94 (155)
T ss_dssp CSEEEEEEEESSGGGCCSCEECCCEEETTEEEEEEEEEEC------CBEEEEEEEEST-TCCCSSCEEEEEEEEEECCSS
T ss_pred CCCcEEEEEECChhhcCCceEcCCEEECCccEEEEEEECCCCCCCCCCEEEEEEEeCC-CCCCCCCEEEEEEEEEEEcCC
Confidence 456889999999997 99999999865 35799999999964 345678999999999999998
Q ss_pred CCc-ccccccceeeccCCCCccccceeeccccccCCCCeeeCCEEEEEEEEEEEeec
Q 030100 127 LSK-HNEKKASTWLSTSSEDWGWSTFVELSYFNKAENGFLMNDVCIVEAEVLRISKA 182 (183)
Q Consensus 127 ~~~-~~~~~~~~~F~~~~~~wG~~~Fi~~~~L~~~~~gyl~nD~l~Ie~~V~i~~~t 182 (183)
+.. +..+...++|.....+|||++||++++|+++++|||+||+|+|+|+|.|.++|
T Consensus 95 ~~~~~~~~~~~~~F~~~~~~wG~~~Fi~~~~L~~~~~~yl~dD~l~Ie~~V~V~~~t 151 (155)
T 2foj_A 95 DDEKSFSRRISHLFFHKENDWGFSNFMAWSEVTDPEKGFIDDDKVTFEVFVQADAPH 151 (155)
T ss_dssp CGGGCEEEEEEEEEETTBCEEEEEEEEEHHHHTCTTTSSCBTTBEEEEEEEEECCCB
T ss_pred CCcceEEeccEEEeCCCCCCEeECCeEEHHHhcCcCCCceECCEEEEEEEEEEeCcc
Confidence 765 44556678898767899999999999999888999999999999999998876
No 2
>3ivv_A Speckle-type POZ protein; protein binding, nucleus, UBL conjugation pathway, ligase; 1.25A {Homo sapiens} SCOP: b.8.1.1 PDB: 3ivq_A 3ivb_A 3hsv_A 3hqh_A 3hqm_A 3hql_A 2cr2_A
Probab=99.94 E-value=8.6e-27 Score=172.55 Aligned_cols=112 Identities=23% Similarity=0.448 Sum_probs=94.5
Q ss_pred CCCCcEEEEEEcCccc------------------------eeeEeeCCCCCCCCCeEEEEEEecCCCCCCCCCeEEEEEE
Q 030100 64 SASNYKHVWKIENFSK------------------------KIKLYPKGQGVGRGSHISVYLALADLSTITRDSKIYVHFT 119 (183)
Q Consensus 64 ~~~~~~~~W~I~nfS~------------------------~l~~yP~G~~~~~~~~lSlyL~l~~~~~~~~~w~i~~~f~ 119 (183)
+...++|+|+|+|||. +|++||+|+..+.++||||||+|.+. ++|++.|+|+
T Consensus 7 ~~~~~~~~w~I~~fs~~~~~~g~~~~S~~F~~gg~~g~~W~i~~yP~G~~~~~~~~lSlyL~l~~~----~~w~v~a~f~ 82 (145)
T 3ivv_A 7 KVVKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSC----PKSEVRAKFK 82 (145)
T ss_dssp CCCEEEEEEEESSGGGCCCCTTCCEECCCEEESGGGCEEEEEEEETTCSSGGGTTEEEEEEEEEEC----SSSEEEEEEE
T ss_pred cEEEEEEEEEEcCchHHhhcCCCEEECCCcCCCCcCCceEEEEEEcCCCCCCCCCeEEEEEEEcCC----CCCcEEEEEE
Confidence 4556778888888875 69999999887667999999999864 4699999999
Q ss_pred EEEEcCCCCccc--ccccceeeccCCCCccccceeeccccccCCCCeeeCCEEEEEEEEEEEe
Q 030100 120 LRIRDQVLSKHN--EKKASTWLSTSSEDWGWSTFVELSYFNKAENGFLMNDVCIVEAEVLRIS 180 (183)
Q Consensus 120 l~ll~q~~~~~~--~~~~~~~F~~~~~~wG~~~Fi~~~~L~~~~~gyl~nD~l~Ie~~V~i~~ 180 (183)
|+|+||.+.++. .....++|. +..+|||++||++++|+++++|||+||+|+|+|+|+|++
T Consensus 83 l~llnq~~~~~~~~~~~~~~~F~-~~~~wG~~~Fi~~~~L~~~~~~yl~dD~l~I~~~V~V~~ 144 (145)
T 3ivv_A 83 FSILNAKGEETKAMESQRAYRFV-QGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQ 144 (145)
T ss_dssp EEEECTTSCEEEEEECSSCEEEE-TTCEEEEEEEEEHHHHHCGGGCSSGGGCEEEEEEEEECC
T ss_pred EEEEecCCCceeeecccceEEec-CCCCcCHHHeEEhhhhccccCCcEeCCEEEEEEEEEEEe
Confidence 999999886643 233567886 468999999999999987779999999999999999985
No 3
>4gjh_A TNF receptor-associated factor 5; TRAF domain, immune system; 2.81A {Mus musculus}
Probab=99.92 E-value=1.1e-25 Score=172.23 Aligned_cols=118 Identities=21% Similarity=0.315 Sum_probs=96.7
Q ss_pred CCCCcEEEEEEcCccc---------------------------eeeEeeCCCCCCCCCeEEEEEEecCCCC-CCCCCeEE
Q 030100 64 SASNYKHVWKIENFSK---------------------------KIKLYPKGQGVGRGSHISVYLALADLST-ITRDSKIY 115 (183)
Q Consensus 64 ~~~~~~~~W~I~nfS~---------------------------~l~~yP~G~~~~~~~~lSlyL~l~~~~~-~~~~w~i~ 115 (183)
...+++|+|+|+|||. +|++||+|+..+.++|||+||+|.+++. ...+|++.
T Consensus 20 ~~~~g~~~w~I~~fS~~~~~~~~g~~~~i~S~~F~~g~~G~~W~i~~yP~G~~~~~~~~lSlyL~l~~~~~d~~l~W~v~ 99 (178)
T 4gjh_A 20 ACYSGKLIWKVTDYRVKKREAVEGHTVSVFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWPFR 99 (178)
T ss_dssp CCSSSEEEEEECCHHHHHHHHHTTSCCCEECCCEESSTTSCEEEEEEETTCCGGGTTTEEEEEEEEBCCTTGGGSCSSCC
T ss_pred cccceEEEEEECCHHHHHhhhhcCCCcEEECCCeEeCCCCeEEEEEEEECCCCCCCCCEEEEEEEEecCCCCcccCCceE
Confidence 4668899999999986 7999999998777899999999987653 23579999
Q ss_pred EEEEEEEEcCCCCc-cccc-----ccceeecc----CCCCccccceeeccccccCCCCeeeCCEEEEEEEEEEEee
Q 030100 116 VHFTLRIRDQVLSK-HNEK-----KASTWLST----SSEDWGWSTFVELSYFNKAENGFLMNDVCIVEAEVLRISK 181 (183)
Q Consensus 116 ~~f~l~ll~q~~~~-~~~~-----~~~~~F~~----~~~~wG~~~Fi~~~~L~~~~~gyl~nD~l~Ie~~V~i~~~ 181 (183)
|+|+|+|+||.+.. +... ...++|.. ...+|||++||++++|+++++|||+||+|+|+|+|.|.++
T Consensus 100 a~~~l~Lldq~~~~~~~~~~~~~~~~~~~F~~p~~~~~~~wG~~~Fi~~~~L~~~~~~yL~dD~l~I~~~V~i~~~ 175 (178)
T 4gjh_A 100 QRVTLMLLDQSGKKNHIVETFKADPNSSSFKRPDGEMNIASGCPRFVSHSTLENSKNTYIKDDTLFLKVAVDLTDL 175 (178)
T ss_dssp CEEEEEECCTTSSCCCEEEEEECCTTCGGGSCCSSSBCCCEEEEEEEEHHHHHCTTCCSSBTTBEEEEEEECCTTC
T ss_pred EEEEEEEEcCCCCcceeEEeeccCCccccccCCcccccCCcChhheeEHHHhhccccCcCcCCEEEEEEEEEecCC
Confidence 99999999998654 3322 13467763 2468999999999999988899999999999999987653
No 4
>1d00_A Tumor necrosis factor receptor associated protein 2; B-sandwich, protein-peptide complex, apoptosis; 2.00A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1ca4_A 1d0j_A 1f3v_B 1czy_A 1d01_A 1d0a_A
Probab=99.92 E-value=2.4e-25 Score=168.45 Aligned_cols=115 Identities=22% Similarity=0.351 Sum_probs=92.8
Q ss_pred CCCcEEEEEEcCccc---------------------------eeeEeeCCCCCCCCCeEEEEEEecCCCCCC-CCCeEEE
Q 030100 65 ASNYKHVWKIENFSK---------------------------KIKLYPKGQGVGRGSHISVYLALADLSTIT-RDSKIYV 116 (183)
Q Consensus 65 ~~~~~~~W~I~nfS~---------------------------~l~~yP~G~~~~~~~~lSlyL~l~~~~~~~-~~w~i~~ 116 (183)
...++|+|+|+|||. +|++||+|+..+.++|||+||+|.+++..+ .+|++.+
T Consensus 16 ~~~g~~~w~I~nfS~~~~~~~~g~~~~i~S~~F~~~~gG~~W~i~~yP~G~~~~~~~~lSlyL~l~~~~~~~~~~w~~~~ 95 (168)
T 1d00_A 16 TYDGVFIWKISDFARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQ 95 (168)
T ss_dssp CSSSEEEEEEESHHHHHHHHHTTSSCCEECCCEESSTTSCEEEEEEETTCCGGGTTTEEEEEEEEECCTTGGGSCSSCCC
T ss_pred ccCCEEEEEECCHHHHHHHhhcCCCeEEECCCeecCCCCEEEEEEEEeCCCCCCCCcEEEEEEEEecCCCCccCCCceEE
Confidence 467788888888775 899999998876679999999998876544 6899999
Q ss_pred EEEEEEEcCCCCccccccc-----ceeecc----CCCCccccceeeccccccCCCCeeeCCEEEEEEEEEEEe
Q 030100 117 HFTLRIRDQVLSKHNEKKA-----STWLST----SSEDWGWSTFVELSYFNKAENGFLMNDVCIVEAEVLRIS 180 (183)
Q Consensus 117 ~f~l~ll~q~~~~~~~~~~-----~~~F~~----~~~~wG~~~Fi~~~~L~~~~~gyl~nD~l~Ie~~V~i~~ 180 (183)
+|+|+|+||.+.++..... .+.|.. .+.+|||++||++++|+++ +|||+||+|+|+|+|.|.+
T Consensus 96 ~~~l~ll~q~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~G~~~Fi~~~~L~~~-~gyl~dD~l~I~~~V~v~~ 167 (168)
T 1d00_A 96 KVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVNDMNIASGCPLFCPVSKMEAK-NSYVRDDAIFIKAIVDLTG 167 (168)
T ss_dssp CEEEEECCTTSSCCEEEEECCCTTSGGGSCCSSSBCCCEEEEEEEETTTTTSS-SSSSBTTEEEEEEEECCTT
T ss_pred EEEEEEECCCCCccceeccccCcchhhccCCCcCCCCCcCcceEeEHHHhccc-CCceeCCEEEEEEEEEecC
Confidence 9999999998866543221 234542 3578999999999999974 5999999999999998753
No 5
>1ca9_A TRAF2, protein (TNF receptor associated factor 2); TNF signaling, TRAF, adapter protein, cell surviVal; 2.30A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1qsc_A 1czz_A
Probab=99.91 E-value=6.6e-25 Score=169.74 Aligned_cols=115 Identities=22% Similarity=0.364 Sum_probs=92.9
Q ss_pred CCCcEEEEEEcCccc---------------------------eeeEeeCCCCCCCCCeEEEEEEecCCCCCC-CCCeEEE
Q 030100 65 ASNYKHVWKIENFSK---------------------------KIKLYPKGQGVGRGSHISVYLALADLSTIT-RDSKIYV 116 (183)
Q Consensus 65 ~~~~~~~W~I~nfS~---------------------------~l~~yP~G~~~~~~~~lSlyL~l~~~~~~~-~~w~i~~ 116 (183)
...++|+|+|+|||. +|++||+|+..+.++|||+||++.+++..+ .+|++.+
T Consensus 40 ~~~g~~~w~I~nfS~~~~~~~~g~~~~i~S~~F~v~~gG~~W~i~~yP~G~~~~~~~~lSlyL~l~~~~~~~~~~W~~~a 119 (192)
T 1ca9_A 40 TYDGVFIWKISDFARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQ 119 (192)
T ss_dssp CSSSEEEEEEESHHHHHHHHHTTSSCCEECCCEESSTTSCEEEEEEETTCCGGGTTTEEEEEEEEECCTTGGGSCSSCCC
T ss_pred ccCceEEEEECCHHHHHHHhhcCCCceEECceEEeCCCCeEEEEEEEeCCCCCCCCCEEEEEEEEccCCCCCcCCCceEE
Confidence 467788888888775 899999998876789999999998876554 6899999
Q ss_pred EEEEEEEcCCCCcccccc-----cceeec----cCCCCccccceeeccccccCCCCeeeCCEEEEEEEEEEEe
Q 030100 117 HFTLRIRDQVLSKHNEKK-----ASTWLS----TSSEDWGWSTFVELSYFNKAENGFLMNDVCIVEAEVLRIS 180 (183)
Q Consensus 117 ~f~l~ll~q~~~~~~~~~-----~~~~F~----~~~~~wG~~~Fi~~~~L~~~~~gyl~nD~l~Ie~~V~i~~ 180 (183)
+|+|+|+||.+.++.... ..+.|. ....+|||++||++++|++ ++|||+||+|+|+|+|.|.+
T Consensus 120 ~~~l~lldq~~~~~~~~~~~~~~~~~~f~rp~~~~~~~wG~~~Fi~~~~L~~-~~gyl~dD~l~I~~~V~V~~ 191 (192)
T 1ca9_A 120 KVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVNDMNIASGCPLFCPVSKMEA-KNSYVRDDAIFIKAIVDLTG 191 (192)
T ss_dssp CEEEEECCTTSSCCEEEEECCCTTSGGGSCCSSSBCCCEEEEEEEETHHHHS-SCSSCBTTEEEEEEEECCTT
T ss_pred EEEEEEECCCCCceeeEeeccCCchhhhcCCccCCCCCcChhheeEHHHhhh-ccCCEeCCEEEEEEEEEecC
Confidence 999999999887553222 112353 2346899999999999996 48999999999999998864
No 6
>2gkw_A TNF receptor-associated factor 3; CD40, NF-KB signaling, BAFF receptor, TRAF3, apoptosis; 2.70A {Homo sapiens} PDB: 1kzz_A 1l0a_A 1zms_A 1rf3_A
Probab=99.89 E-value=4.8e-24 Score=165.04 Aligned_cols=114 Identities=20% Similarity=0.346 Sum_probs=92.4
Q ss_pred CCCcEEEEEEcCccc---------------------------eeeEeeCCCCCCCCCeEEEEEEecCCCCCC-CCCeEEE
Q 030100 65 ASNYKHVWKIENFSK---------------------------KIKLYPKGQGVGRGSHISVYLALADLSTIT-RDSKIYV 116 (183)
Q Consensus 65 ~~~~~~~W~I~nfS~---------------------------~l~~yP~G~~~~~~~~lSlyL~l~~~~~~~-~~w~i~~ 116 (183)
..+++|+|+|+|||. +|++||+|+..+.++|||+||++++++..+ .+|++.+
T Consensus 37 ~~~g~~~w~I~~fS~~~~~~~~g~~~~i~S~~F~vg~~Gykw~i~~yPnG~~~~~~~~lSlyL~l~~~~~d~~l~wp~~a 116 (192)
T 2gkw_A 37 SYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQ 116 (192)
T ss_dssp CCSSEEEEEEECHHHHHHHHHHTSCSCEECCCEESSTTSCEEEEEEETTCCGGGTTTEEEEEEEEECCTTGGGSCSSCCC
T ss_pred ccCcEEEEEECCHHHHHHHhhcCCCceEEcccEEECCCCcEEEEEEEeCCCCCCCCCEEEEEEEEecCCCCccCCCcEEE
Confidence 367888888888876 899999998876789999999998776543 5799999
Q ss_pred EEEEEEEcCCCCc-ccccc-----cceeeccC----CCCccccceeeccccccCCCCeeeCCEEEEEEEEEEEe
Q 030100 117 HFTLRIRDQVLSK-HNEKK-----ASTWLSTS----SEDWGWSTFVELSYFNKAENGFLMNDVCIVEAEVLRIS 180 (183)
Q Consensus 117 ~f~l~ll~q~~~~-~~~~~-----~~~~F~~~----~~~wG~~~Fi~~~~L~~~~~gyl~nD~l~Ie~~V~i~~ 180 (183)
+|+|+|+||.+.. +.... ..++|... +.+|||++||++++|++ +|||+||+|+|+|+|.|..
T Consensus 117 ~~~l~lldq~~~~~~~~~~~~~~~~~~~F~~~~~~~~~~wG~~~Fi~~~~L~~--~gyl~dD~l~I~~~V~v~~ 188 (192)
T 2gkw_A 117 KVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLEN--GTYIKDDTIFIKVIVDTSD 188 (192)
T ss_dssp CEEEEECCCSTTCCCEEEEECCCTTCTTSSCCSSSBCCCEEEEEEEEHHHHHH--TTSCBTTEEEEEEEECCTT
T ss_pred EEEEEEECCCCCccceEEEEecCCCcccccCCCCCCcCCCChHHEeEHHHhCc--CCCeeCCEEEEEEEEEcCC
Confidence 9999999998763 33211 22567532 36899999999999986 6899999999999998754
No 7
>1lb6_A TNF receptor-associated factor 6; TRAF6-CD40 complex, signaling protein; 1.80A {Homo sapiens} SCOP: b.8.1.1 PDB: 1lb5_A 1lb4_A
Probab=99.89 E-value=4e-23 Score=155.17 Aligned_cols=99 Identities=18% Similarity=0.190 Sum_probs=75.3
Q ss_pred eeeEeeCCCCCCC-CCeEEEEEEecCCCCC-CCCCeEEEEEEEEEEcCCCCc---ccccc-----cceeecc-----CCC
Q 030100 80 KIKLYPKGQGVGR-GSHISVYLALADLSTI-TRDSKIYVHFTLRIRDQVLSK---HNEKK-----ASTWLST-----SSE 144 (183)
Q Consensus 80 ~l~~yP~G~~~~~-~~~lSlyL~l~~~~~~-~~~w~i~~~f~l~ll~q~~~~---~~~~~-----~~~~F~~-----~~~ 144 (183)
+|++||+|+..+. ++|||+||++++++.. ..+|++.|+|+|+|+||.+.. +.... ....|.. +..
T Consensus 44 ~i~~yP~G~~~~~~~~~lSlyL~l~~~~~d~~l~wp~~a~~~l~lldq~~~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~ 123 (160)
T 1lb6_A 44 CMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILDQSEAPVRQNHEEIMDAKPELLAFQRPTIPRNPK 123 (160)
T ss_dssp EEEEEECCTTCTTTTTEEEEEEEEECCTTGGGSCSSCCSEEEEEECCCSCTTSCCCEEEEEECCTTSGGGSCCSSSBCSE
T ss_pred EEEEEecCCCCCCCCCEEEEEEEEeecCCCccCCCceeeeEEEEEEcCCCccccccceEEeecCCcchhccCCcccCCCC
Confidence 8999999987653 7899999999877653 357999999999999997642 11111 1123432 123
Q ss_pred CccccceeeccccccCCCCeeeCCEEEEEEEEEEEe
Q 030100 145 DWGWSTFVELSYFNKAENGFLMNDVCIVEAEVLRIS 180 (183)
Q Consensus 145 ~wG~~~Fi~~~~L~~~~~gyl~nD~l~Ie~~V~i~~ 180 (183)
+|||++||++++|+ ++|||+||+|+|+|+|.|+.
T Consensus 124 ~~G~~~Fi~~~~L~--~~~yl~dD~l~I~~~V~v~~ 157 (160)
T 1lb6_A 124 GFGYVTFMHLEALR--QRTFIKDDTLLVRCEVSTRF 157 (160)
T ss_dssp EEEEEEEEEGGGGG--TSCCCBTTBEEEEEEEEC--
T ss_pred CcCEeeEeEHHHhh--hCCCccCCEEEEEEEEEEee
Confidence 79999999999998 48899999999999999874
No 8
>4ghu_A TNF receptor-associated factor 3; alpha/beta, innate immunity, IFN pathway, immune system; 2.20A {Mus musculus} PDB: 2gkw_A 1kzz_A 1l0a_A 1zms_A 1rf3_A
Probab=99.89 E-value=8.6e-24 Score=164.37 Aligned_cols=115 Identities=20% Similarity=0.336 Sum_probs=92.0
Q ss_pred CCCCcEEEEEEcCccc---------------------------eeeEeeCCCCCCCCCeEEEEEEecCCCCC-CCCCeEE
Q 030100 64 SASNYKHVWKIENFSK---------------------------KIKLYPKGQGVGRGSHISVYLALADLSTI-TRDSKIY 115 (183)
Q Consensus 64 ~~~~~~~~W~I~nfS~---------------------------~l~~yP~G~~~~~~~~lSlyL~l~~~~~~-~~~w~i~ 115 (183)
...+++|+|+|+|||. +|++||+|+..+.++||||||++++++.. ..+|++.
T Consensus 36 ~~~~g~~~w~I~nfS~~~~~~~~~~g~~i~S~~F~vg~~Gy~W~i~~yPnG~~~~~~~~lSlyL~l~~g~~D~~l~wp~~ 115 (198)
T 4ghu_A 36 ASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFK 115 (198)
T ss_dssp CCSSSEEEEEECCHHHHHHHHHTTSSCCEECCCEESSTTSCEEEEEEETTCCGGGTTTEEEEEEEEECCTTGGGSCSSCC
T ss_pred cccccEEEEEECCHHHHHhhhccCCCcEEECCCeEECCCCcEEEEEEEeCCCCCCCCCeEEEEEEecCCccCCCCCceEE
Confidence 3567889999999986 79999999987778999999999877643 3579999
Q ss_pred EEEEEEEEcCCCCc-ccccc-----cceee----ccCCCCccccceeeccccccCCCCeeeCCEEEEEEEEEEEe
Q 030100 116 VHFTLRIRDQVLSK-HNEKK-----ASTWL----STSSEDWGWSTFVELSYFNKAENGFLMNDVCIVEAEVLRIS 180 (183)
Q Consensus 116 ~~f~l~ll~q~~~~-~~~~~-----~~~~F----~~~~~~wG~~~Fi~~~~L~~~~~gyl~nD~l~Ie~~V~i~~ 180 (183)
++|+|+|+||.+.. +.... ....| ...+.+|||++||++++|++ +|||+||+|+|+|+|.|+.
T Consensus 116 a~~~l~Lldq~~~~~~~~~~~~~~~~~~~f~rp~~~~~~~wG~~~Fi~~~~L~~--~gyL~dD~l~I~~~V~v~~ 188 (198)
T 4ghu_A 116 QKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLEN--GTYIKDDTIFIKVIVDTSD 188 (198)
T ss_dssp CCEEEEECCCSTTCCCEEEEECCCTTSGGGSCCSSSBCCCEEEEEEEEHHHHHH--TTSCBTTBEEEEEEECCTT
T ss_pred EEEEEEEEcCCCCccceEEEeecCcccceecCCcccCcCCcCchhEeEHHHhhh--cCCeeCCEEEEEEEEEecc
Confidence 99999999998643 32211 11223 33456899999999999985 8999999999999998864
No 9
>1flk_A TNF receptor associated factor 3; TNF signaling, TRAF3, CD40-binding protein, apoptosis; 2.80A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1fll_A
Probab=99.88 E-value=1.9e-23 Score=165.77 Aligned_cols=115 Identities=20% Similarity=0.332 Sum_probs=94.0
Q ss_pred CCCcEEEEEEcCccc---------------------------eeeEeeCCCCCCCCCeEEEEEEecCCCCCC-CCCeEEE
Q 030100 65 ASNYKHVWKIENFSK---------------------------KIKLYPKGQGVGRGSHISVYLALADLSTIT-RDSKIYV 116 (183)
Q Consensus 65 ~~~~~~~W~I~nfS~---------------------------~l~~yP~G~~~~~~~~lSlyL~l~~~~~~~-~~w~i~~ 116 (183)
...++|+|+|+|||. +|++||+|+..+.++|||+||++++++..+ .+|++.+
T Consensus 73 ~~~g~~~wkI~nfS~~~~~~~~g~~~~i~S~~F~vg~~Gy~w~i~~yPnG~~~~~~~~lSlyL~l~~~~~d~~l~Wp~~a 152 (228)
T 1flk_A 73 SYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQ 152 (228)
T ss_dssp CSSSEEEEEEECHHHHHHHHHTTSCCCEECCCEESSTTSCEECEEEETTCCGGGTTTEEEEEECCBCCTTTTSSCSSCCC
T ss_pred CcCcEEEEEECCHHHHHHHhhcCCCeeEECceEEeCCCCcEEEEEEEcCCCCCCCCCEEEEEEEEecCCccccCCCcEEE
Confidence 478899999999976 899999999877789999999998776543 5799999
Q ss_pred EEEEEEEcCCCCc-cccc-----ccceeecc----CCCCccccceeeccccccCCCCeeeCCEEEEEEEEEEEee
Q 030100 117 HFTLRIRDQVLSK-HNEK-----KASTWLST----SSEDWGWSTFVELSYFNKAENGFLMNDVCIVEAEVLRISK 181 (183)
Q Consensus 117 ~f~l~ll~q~~~~-~~~~-----~~~~~F~~----~~~~wG~~~Fi~~~~L~~~~~gyl~nD~l~Ie~~V~i~~~ 181 (183)
+|+|+|+||.+.+ +... ...++|.. .+.+|||++||++++|++ +|||+||+|+|+|+|.|.++
T Consensus 153 ~~~l~lldq~~~~~~~~~~~~~~~~~~~F~rp~~~~~~~wG~~~Fi~~~~L~~--~gyL~dD~l~I~~~V~v~~~ 225 (228)
T 1flk_A 153 KVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLEN--GTYIKDDTIFIKVIVDTSDL 225 (228)
T ss_dssp CEEEEECCCSSSCCCEEEEECCCTTCTTSSSCSSSBCCCCSEEEEEEHHHHSS--STTCCSSEEEEEEECCCTTS
T ss_pred EEEEEEEcCCCCccceeeeecCCCccccccCCccCCCCCcCHHHeeEHHHHcc--CCCccCCEEEEEEEEEcccc
Confidence 9999999998764 3221 12345652 246899999999999985 79999999999999988654
No 10
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.87 E-value=1.7e-22 Score=166.17 Aligned_cols=109 Identities=23% Similarity=0.451 Sum_probs=89.3
Q ss_pred CcEEEEEEcCccc------------------------eeeEeeCCCCCCCCCeEEEEEEecCCCCCCCCCeEEEEEEEEE
Q 030100 67 NYKHVWKIENFSK------------------------KIKLYPKGQGVGRGSHISVYLALADLSTITRDSKIYVHFTLRI 122 (183)
Q Consensus 67 ~~~~~W~I~nfS~------------------------~l~~yP~G~~~~~~~~lSlyL~l~~~~~~~~~w~i~~~f~l~l 122 (183)
.++|+|+|+|||. +|++||+|+..+.++|+|+||+|.++ ++|++.|+|+|+|
T Consensus 6 ~~~~~w~I~nfs~~~~~~~~~i~S~~F~~gg~~~~~W~i~~yP~G~~~~~~~~lslyL~~~~~----~~~~v~a~~~~~l 81 (312)
T 3hqi_A 6 KFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSC----PKSEVRAKFKFSI 81 (312)
T ss_dssp EEEEEEEETTGGGCCCCTTCCEECCCBCC--CCCCEEEEEEETTCCC--CTTEEEEEEEEEEC----CC-CEEEEEEEEE
T ss_pred EEEEEEEEcCcchhhhcCCCeEeeCCcccCCCCCceEEEEEECCCCCccCCCcEEEEEEEcCC----CCCcEEEEEEEEE
Confidence 3567777777775 89999999887678999999999864 3689999999999
Q ss_pred EcCCCCcccc--cccceeeccCCCCccccceeeccccccCCCCeeeCCEEEEEEEEEEEe
Q 030100 123 RDQVLSKHNE--KKASTWLSTSSEDWGWSTFVELSYFNKAENGFLMNDVCIVEAEVLRIS 180 (183)
Q Consensus 123 l~q~~~~~~~--~~~~~~F~~~~~~wG~~~Fi~~~~L~~~~~gyl~nD~l~Ie~~V~i~~ 180 (183)
+||++..... ....++|.. ..+|||++||+|++|+++++|||+||+++|+|+|.|++
T Consensus 82 ~~~~~~~~~~~~~~~~~~F~~-~~~wG~~~Fi~~~~L~~~~~~yl~dD~l~i~~~v~v~~ 140 (312)
T 3hqi_A 82 LNAKGEETKAMESQRAYRFVQ-GKDWGFKKFIRRGFLLDEANGLLPDDKLTLFCEVSVVQ 140 (312)
T ss_dssp ECTTSCEEEEEECSSCEEECT-TCEEEEEEEEEHHHHTCGGGCCCGGGCEEEEEEEEEEE
T ss_pred EeCCCCcccccccCCceeCCC-CCCcCHHHhccHHHhhccccCeecCCEEEEEEEEEEEe
Confidence 9998865432 235678874 56999999999999998788999999999999999985
No 11
>2f1z_A Ubiquitin carboxyl-terminal hydrolase 7; hausp, USP7, UBP, deubiquitinating enzyme, substrate recognition; 3.20A {Homo sapiens}
Probab=99.87 E-value=2.2e-22 Score=176.38 Aligned_cols=115 Identities=20% Similarity=0.275 Sum_probs=94.8
Q ss_pred CCCcEEEEEEcCccc-----------------eeeEeeCCCCCC-CCCeEEEEEEecCCCCCCCCCeEEEEEEEEEEcCC
Q 030100 65 ASNYKHVWKIENFSK-----------------KIKLYPKGQGVG-RGSHISVYLALADLSTITRDSKIYVHFTLRIRDQV 126 (183)
Q Consensus 65 ~~~~~~~W~I~nfS~-----------------~l~~yP~G~~~~-~~~~lSlyL~l~~~~~~~~~w~i~~~f~l~ll~q~ 126 (183)
...++|+|+|+|||. +|++||+|+..+ .++|||+||+|.+. ..+.+|.+.|+|+|+|+||.
T Consensus 28 ~~~~~~~w~I~nfS~~~~~~~S~~F~vgg~~W~i~~yP~G~~~~~~~~~lSlyL~~~~~-~~~~~w~v~a~f~l~l~n~~ 106 (522)
T 2f1z_A 28 RSEATFQFTVERFSRLSESVLSPPCFVRNLPWKIMVMPRFYPDRPHQKSVGFFLQCNAE-SDSTSWSCHAQAVLKIINYR 106 (522)
T ss_dssp CSEEEEEEEESSCTTCCSCEECCCEEETTEEEEEEECBC--------CBBCEEEEESTT-CCCSSCBEEEEEEEEECCTT
T ss_pred cCCcEEEEEECChhhcCCceeCCCEEECCEeeEEEEEeCCCCCCCCCCeEEEEEEecCC-CCCCCceEEEEEEEEEEcCC
Confidence 457899999999997 999999997543 57899999999876 45678999999999999998
Q ss_pred CCc-ccccccceeeccCCCCccccceeeccccccCCCCeeeCCEEEEEEEEEEEe
Q 030100 127 LSK-HNEKKASTWLSTSSEDWGWSTFVELSYFNKAENGFLMNDVCIVEAEVLRIS 180 (183)
Q Consensus 127 ~~~-~~~~~~~~~F~~~~~~wG~~~Fi~~~~L~~~~~gyl~nD~l~Ie~~V~i~~ 180 (183)
++. +..+...++|.....+|||.+||++++|.++++|||+||+++|+|+|.|..
T Consensus 107 ~~~~~~~~~~~~~F~~~~~~wG~~~Fi~~~~L~~~~~g~L~nD~l~i~~~V~v~~ 161 (522)
T 2f1z_A 107 DDEKSFSRRISHLFFHKENDWGFSNFMAWSEVTDPEKGFIDDDKVTFEVFVQADA 161 (522)
T ss_dssp CGGGCEEEECCEEECGGGCEEEESSSSBHHHHSCGGGSSCBTTBEEEEEEEEECC
T ss_pred CCccceeccceeEecCCCCCcchhheeEhhHhcCcccCcccCCcEEEEEEeeccc
Confidence 754 345567788987678999999999999987789999999999999999864
No 12
>4gwm_A Meprin A subunit beta; mulidomain structure, hydrolase; HET: NAG BMA FUC MAN; 1.85A {Homo sapiens} PDB: 4gwn_A*
Probab=99.17 E-value=8.6e-11 Score=104.01 Aligned_cols=110 Identities=20% Similarity=0.308 Sum_probs=81.3
Q ss_pred CCCCcEEEEEEcCccc----------------------eeeEeeCCCCCCCCCeEEEEEEecCCCCCC-CCCeE-EEEEE
Q 030100 64 SASNYKHVWKIENFSK----------------------KIKLYPKGQGVGRGSHISVYLALADLSTIT-RDSKI-YVHFT 119 (183)
Q Consensus 64 ~~~~~~~~W~I~nfS~----------------------~l~~yP~G~~~~~~~~lSlyL~l~~~~~~~-~~w~i-~~~f~ 119 (183)
+.+.+.+.|+|.||+. +|.+||+| +.|+|||++|..++.+. ..|++ .-+++
T Consensus 402 ~G~CP~~vw~i~nfs~~l~~~~~~~~Sp~Fys~~GY~~~v~l~~~~-----~~~~~~~~~l~sG~~D~~L~WP~~~~q~t 476 (592)
T 4gwm_A 402 ETRCPHHIWHIRNFTQFIGSPNGTLYSPPFYSSKGYAFQIYLNLAH-----VTNAGIYFHLISGANDDQLQWPCPWQQAT 476 (592)
T ss_dssp SSCCCSEEEEECSCGGGTTCTTCEEECCCEECTTSCEEEEEEECCS-----SSEEEEEEEEECCTTGGGSCSSCCSEEEE
T ss_pred eCCCCCCceeecCHHHhhcCCCCceeCCCccCCCCeEEEEEEecCC-----CceEEEEEEEecCCCCCCccCCCCCCEEE
Confidence 5667789999999998 66666653 47999999999987644 78999 57899
Q ss_pred EEEEcCCCCc----cccc--------c---ccee------------ecc-----CCCCccccceeeccccccCCCCeeeC
Q 030100 120 LRIRDQVLSK----HNEK--------K---ASTW------------LST-----SSEDWGWSTFVELSYFNKAENGFLMN 167 (183)
Q Consensus 120 l~ll~q~~~~----~~~~--------~---~~~~------------F~~-----~~~~wG~~~Fi~~~~L~~~~~gyl~n 167 (183)
+.|+||+... +... . .... |.+ ++.+|||+.||+++.|+. ..||+|
T Consensus 477 ~~llDQ~pd~~~rms~~~s~ttdp~~~~~~~~~~w~~P~~~g~~~~~~~~~~~~r~~~~G~~~fish~~l~~--r~fiK~ 554 (592)
T 4gwm_A 477 MTLLDQNPDIRQRMSNQRSITTDPFMTTDNGNYFWDRPSKVGTVALFSNGTQFRRGGGYGTSAFITHERLKS--RDFIKG 554 (592)
T ss_dssp EEECCCCSSGGGCCCEEEEEECCTTCBCTTSCBTTSCHHHHCEEEECTTCCEEEEEEEEEEEEEEEHHHHTS--TTSSBT
T ss_pred EEEeCCCCChHhcCceeEEEEcCCcccCcccccccCCcccccccccccCCcceeecCCcCccccccHHHHhh--cCcccC
Confidence 9999996432 1100 0 0011 211 124789999999999984 669999
Q ss_pred CEEEEEEEEEEEe
Q 030100 168 DVCIVEAEVLRIS 180 (183)
Q Consensus 168 D~l~Ie~~V~i~~ 180 (183)
|+++|.++|+=+.
T Consensus 555 d~~~i~~~~eD~~ 567 (592)
T 4gwm_A 555 DDVYILLTVEDIS 567 (592)
T ss_dssp TBEEEEEEEEECG
T ss_pred CeEEEEEEEEeCc
Confidence 9999999997553
No 13
>2foj_A Ubiquitin carboxyl-terminal hydrolase 7; MATH domain, hydrolase; 1.60A {Homo sapiens} PDB: 1yze_A 1yy6_A 2foo_A 2fop_A 3mqr_A 3mqs_C 2f1w_A 2f1x_A 2f1y_A 2xxn_A
Probab=98.72 E-value=3.5e-09 Score=78.25 Aligned_cols=43 Identities=26% Similarity=0.556 Sum_probs=40.3
Q ss_pred ceeccCCccccCccceeccccccCCCCCeEEcceEEEeEEEEE
Q 030100 4 ERRFHVLKLEWGFDQFIPLEEFNDASNGYLVGDTCVFGAEVLV 46 (183)
Q Consensus 4 ~~~f~~~~~~~G~~~~i~~~~l~~~~~gyl~~d~~~~~~~v~i 46 (183)
.|+|......|||.+||++++|+||++|||+||+++|+|+|.|
T Consensus 105 ~~~F~~~~~~wG~~~Fi~~~~L~~~~~~yl~dD~l~Ie~~V~V 147 (155)
T 2foj_A 105 SHLFFHKENDWGFSNFMAWSEVTDPEKGFIDDDKVTFEVFVQA 147 (155)
T ss_dssp EEEEETTBCEEEEEEEEEHHHHTCTTTSSCBTTBEEEEEEEEE
T ss_pred EEEeCCCCCCEeECCeEEHHHhcCcCCCceECCEEEEEEEEEE
Confidence 5789888889999999999999999999999999999999994
No 14
>3ivv_A Speckle-type POZ protein; protein binding, nucleus, UBL conjugation pathway, ligase; 1.25A {Homo sapiens} SCOP: b.8.1.1 PDB: 3ivq_A 3ivb_A 3hsv_A 3hqh_A 3hqm_A 3hql_A 2cr2_A
Probab=98.28 E-value=1.3e-07 Score=68.95 Aligned_cols=36 Identities=36% Similarity=0.578 Sum_probs=33.4
Q ss_pred ccccCccceeccccccCCCCCeEEcceEEEeEEEEE
Q 030100 11 KLEWGFDQFIPLEEFNDASNGYLVGDTCVFGAEVLV 46 (183)
Q Consensus 11 ~~~~G~~~~i~~~~l~~~~~gyl~~d~~~~~~~v~i 46 (183)
...|||.+||++++|+++++|||+||+++|+|+|.|
T Consensus 107 ~~~wG~~~Fi~~~~L~~~~~~yl~dD~l~I~~~V~V 142 (145)
T 3ivv_A 107 GKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSV 142 (145)
T ss_dssp TCEEEEEEEEEHHHHHCGGGCSSGGGCEEEEEEEEE
T ss_pred CCCcCHHHeEEhhhhccccCCcEeCCEEEEEEEEEE
Confidence 467999999999999999999999999999999974
No 15
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=98.01 E-value=1.7e-06 Score=70.48 Aligned_cols=44 Identities=34% Similarity=0.502 Sum_probs=39.0
Q ss_pred cceeccCCccccCccceeccccccCCCCCeEEcceEEEeEEEE-Ee
Q 030100 3 KERRFHVLKLEWGFDQFIPLEEFNDASNGYLVGDTCVFGAEVL-VK 47 (183)
Q Consensus 3 ~~~~f~~~~~~~G~~~~i~~~~l~~~~~gyl~~d~~~~~~~v~-i~ 47 (183)
..++|+.. ..|||.+||++++|+++++|||+||+++++++|. ++
T Consensus 96 ~~~~F~~~-~~wG~~~Fi~~~~L~~~~~~yl~dD~l~i~~~v~v~~ 140 (312)
T 3hqi_A 96 RAYRFVQG-KDWGFKKFIRRGFLLDEANGLLPDDKLTLFCEVSVVQ 140 (312)
T ss_dssp SCEEECTT-CEEEEEEEEEHHHHTCGGGCCCGGGCEEEEEEEEEEE
T ss_pred CceeCCCC-CCcCHHHhccHHHhhccccCeecCCEEEEEEEEEEEe
Confidence 46788854 5899999999999999999999999999999999 54
No 16
>2f1z_A Ubiquitin carboxyl-terminal hydrolase 7; hausp, USP7, UBP, deubiquitinating enzyme, substrate recognition; 3.20A {Homo sapiens}
Probab=97.96 E-value=1.7e-06 Score=75.44 Aligned_cols=44 Identities=25% Similarity=0.527 Sum_probs=40.7
Q ss_pred cceeccCCccccCccceeccccccCCCCCeEEcceEEEeEEEEE
Q 030100 3 KERRFHVLKLEWGFDQFIPLEEFNDASNGYLVGDTCVFGAEVLV 46 (183)
Q Consensus 3 ~~~~f~~~~~~~G~~~~i~~~~l~~~~~gyl~~d~~~~~~~v~i 46 (183)
..|+|......|||.+||++++|.|+++|||+||++.|+|+|.+
T Consensus 116 ~~~~F~~~~~~wG~~~Fi~~~~L~~~~~g~L~nD~l~i~~~V~v 159 (522)
T 2f1z_A 116 ISHLFFHKENDWGFSNFMAWSEVTDPEKGFIDDDKVTFEVFVQA 159 (522)
T ss_dssp CCEEECGGGCEEEESSSSBHHHHSCGGGSSCBTTBEEEEEEEEE
T ss_pred ceeEecCCCCCcchhheeEhhHhcCcccCcccCCcEEEEEEeec
Confidence 45789888889999999999999999999999999999999994
No 17
>4gwm_A Meprin A subunit beta; mulidomain structure, hydrolase; HET: NAG BMA FUC MAN; 1.85A {Homo sapiens} PDB: 4gwn_A*
Probab=87.36 E-value=0.2 Score=44.29 Aligned_cols=36 Identities=22% Similarity=0.334 Sum_probs=31.6
Q ss_pred cccCccceeccccccCCCCCeEEcceEEEeEEEE-Eecc
Q 030100 12 LEWGFDQFIPLEEFNDASNGYLVGDTCVFGAEVL-VKER 49 (183)
Q Consensus 12 ~~~G~~~~i~~~~l~~~~~gyl~~d~~~~~~~v~-i~~~ 49 (183)
..|||+.||+++.|. +..||.||++.|-|.|. |...
T Consensus 533 ~~~G~~~fish~~l~--~r~fiK~d~~~i~~~~eD~~~l 569 (592)
T 4gwm_A 533 GGYGTSAFITHERLK--SRDFIKGDDVYILLTVEDISHL 569 (592)
T ss_dssp EEEEEEEEEEHHHHT--STTSSBTTBEEEEEEEEECGGG
T ss_pred CCcCccccccHHHHh--hcCcccCCeEEEEEEEEeCccc
Confidence 458999999999997 77899999999999998 6554
Done!