BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>030102
MGKKVKWSWNSALIGAVAATATAALVTAKPKDPTFQLISIKLTSFKLKFPVLDAEVILTV
HVVNPNITPIKYSSTTMSIFYEGSLLGSAPVKAGSQAAGSCQLLHIPARLDGLELAHHAR
KFFADVAKREMLFEAKVDIEGTAKVLWWDHKFKIHVDSHVTVDPVFLDVIDQENKSELEV
FVG

High Scoring Gene Products

Symbol, full name Information P value
AT3G44380 protein from Arabidopsis thaliana 4.7e-64
AT4G13270 protein from Arabidopsis thaliana 4.3e-08
AT1G52330 protein from Arabidopsis thaliana 1.4e-05
AT2G01080 protein from Arabidopsis thaliana 0.00011

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  030102
        (183 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2100177 - symbol:AT3G44380 "AT3G44380" species...   653  4.7e-64   1
TAIR|locus:2142040 - symbol:AT4G13270 "AT4G13270" species...   126  4.3e-08   1
TAIR|locus:2018154 - symbol:AT1G52330 "AT1G52330" species...   115  1.4e-05   1
TAIR|locus:2045771 - symbol:AT2G01080 "AT2G01080" species...   109  0.00011   1


>TAIR|locus:2100177 [details] [associations]
            symbol:AT3G44380 "AT3G44380" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0009269 "response to
            desiccation" evidence=IEA] InterPro:IPR013990 SMART:SM00769
            InterPro:IPR004864 EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0009269 EMBL:AL138641 Pfam:PF03168 UniGene:At.1345
            IPI:IPI00523939 PIR:T47428 RefSeq:NP_190024.1
            ProteinModelPortal:Q9M287 PaxDb:Q9M287 PRIDE:Q9M287
            EnsemblPlants:AT3G44380.1 GeneID:823563 KEGG:ath:AT3G44380
            TAIR:At3g44380 eggNOG:NOG299663 HOGENOM:HOG000006316
            InParanoid:Q9M287 OMA:VHVTNPN PhylomeDB:Q9M287
            ProtClustDB:CLSN2684481 Genevestigator:Q9M287 Uniprot:Q9M287
        Length = 186

 Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
 Identities = 123/180 (68%), Positives = 143/180 (79%)

Query:     3 KKVKWSWNSALIGXXXXXXXXXXXXXKPKDPTFQLISIKLTSFKLKFPVLDAEVILTVHV 62
             +KVKWSW+SALIG             KPKDPTF LISI LTS KL  PVLDAE++LTVHV
Sbjct:     6 QKVKWSWSSALIGAASATAAASLLSAKPKDPTFHLISIDLTSLKLNLPVLDAELMLTVHV 65

Query:    63 VNPNITPIKYSSTTMSIFYEGSLLGSAPVKAGSQAAGSCQLLHIPARLDGLELAHHARKF 122
              NPNI  I YSST M+I Y+G++LGSA VKAGSQ A SCQLL +PARLDG+ELA HAR+F
Sbjct:    66 TNPNIAAIHYSSTKMTILYDGTVLGSAEVKAGSQPARSCQLLRLPARLDGMELAQHARQF 125

Query:   123 FADVAKREMLFEAKVDIEGTAKVLWWDHKFKIHVDSHVTVDPVFLDVIDQENKSELEVFV 182
             F+DVA REM  EAK+ IEG AKVLWWDH F++HVDS VTVDPVFLDVI QENKS++++F+
Sbjct:   126 FSDVANREMKLEAKLTIEGAAKVLWWDHSFRVHVDSFVTVDPVFLDVIGQENKSQMDLFL 185


>TAIR|locus:2142040 [details] [associations]
            symbol:AT4G13270 "AT4G13270" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0000902 "cell morphogenesis" evidence=RCA]
            [GO:0016049 "cell growth" evidence=RCA] [GO:0048193 "Golgi vesicle
            transport" evidence=RCA] InterPro:IPR004864 EMBL:CP002687
            UniGene:At.33396 UniGene:At.70329 Pfam:PF03168 EMBL:BT021984
            EMBL:BT023476 IPI:IPI00523539 RefSeq:NP_193063.2
            ProteinModelPortal:Q52K84 SMR:Q52K84 PRIDE:Q52K84
            EnsemblPlants:AT4G13270.1 GeneID:826957 KEGG:ath:AT4G13270
            TAIR:At4g13270 HOGENOM:HOG000005936 InParanoid:Q52K84 OMA:SCEVYVN
            PhylomeDB:Q52K84 ProtClustDB:CLSN2690897 Genevestigator:Q52K84
            Uniprot:Q52K84
        Length = 215

 Score = 126 (49.4 bits), Expect = 4.3e-08, P = 4.3e-08
 Identities = 41/147 (27%), Positives = 62/147 (42%)

Query:    30 PKDPTFQLISIKLTSFKLKFP---VLDAEVILTVHVVNPNITPIKYSSTTMSIFYEGSLL 86
             P DP   +  I L    +       LD    LT+ V N +   + Y S  +SI Y G  L
Sbjct:    65 PSDPDITVSRINLNHISVVDSHKIALDLSFSLTIKVRNRDFFSLDYDSLVVSIGYRGREL 124

Query:    87 GSAPVKAGSQAAGSCQLLHIPARLDGLELAHHARKFFADVAKREMLFEAKVDIEGTAKVL 146
             G    K G   A     +     LDGLE+ H       D+AK  + F+    ++G   VL
Sbjct:   125 GLVKSKGGHLKARDSSYIDATLELDGLEVVHDVIYLIGDLAKGVIPFDTIAQVQGDLGVL 184

Query:   147 WWDHKFKIHVDSHVTVDPVFLDVIDQE 173
                  F I +   V+ + V+++V +Q+
Sbjct:   185 L----FNIPIQGKVSCE-VYVNVNNQK 206


>TAIR|locus:2018154 [details] [associations]
            symbol:AT1G52330 "AT1G52330" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR004864 EMBL:CP002684 UniGene:At.37618
            UniGene:At.66802 Pfam:PF03168 HOGENOM:HOG000005936 EMBL:AY924709
            EMBL:DQ132677 IPI:IPI00555530 RefSeq:NP_001077704.1
            ProteinModelPortal:Q5BPW9 PRIDE:Q5BPW9 EnsemblPlants:AT1G52330.2
            GeneID:841664 KEGG:ath:AT1G52330 TAIR:At1g52330 eggNOG:NOG284882
            PhylomeDB:Q5BPW9 ProtClustDB:CLSN2679483 Genevestigator:Q5BPW9
            Uniprot:Q5BPW9
        Length = 227

 Score = 115 (45.5 bits), Expect = 1.4e-05, P = 1.4e-05
 Identities = 30/128 (23%), Positives = 56/128 (43%)

Query:    30 PKDPTFQLISIKLTSFKLK---FPVLDAEVILTVHVVNPNITPIKYSSTTMSIFYEGSLL 86
             P DP  ++I +K++   +     P +D  +++T+ V N ++    ++   ++I Y G  L
Sbjct:    64 PSDPRIKIIRVKISHVHVHRRPVPSIDMTLLVTLKVSNADVYSFDFTDLDVTIDYRGKTL 123

Query:    87 GSAPVKAGSQAAGSCQLLHIPARLDGLELAHHARKFFADVAKREMLFEAKVDIEGTAKVL 146
             G      G   A     L   A LDG+ +         D+AK  + F+   +  G   VL
Sbjct:   124 GHVSSDGGHVTAFGSSYLDAEAELDGVMVFPDVIHLIHDLAKGSVEFDTVTETNGKLGVL 183

Query:   147 WWDHKFKI 154
             ++    K+
Sbjct:   184 FFRFPLKV 191


>TAIR|locus:2045771 [details] [associations]
            symbol:AT2G01080 "AT2G01080" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0005886 "plasma membrane"
            evidence=IDA] InterPro:IPR004864 GO:GO:0005886 EMBL:CP002685
            Pfam:PF03168 EMBL:AC006837 UniGene:At.42518 IPI:IPI00523953
            PIR:D84420 RefSeq:NP_565250.1 UniGene:At.14053
            ProteinModelPortal:Q9SJV8 PRIDE:Q9SJV8 EnsemblPlants:AT2G01080.1
            GeneID:814636 KEGG:ath:AT2G01080 TAIR:At2g01080 InParanoid:Q9SJV8
            OMA:IRYGATA PhylomeDB:Q9SJV8 ProtClustDB:CLSN2687644
            ArrayExpress:Q9SJV8 Genevestigator:Q9SJV8 Uniprot:Q9SJV8
        Length = 231

 Score = 109 (43.4 bits), Expect = 0.00011, P = 0.00011
 Identities = 38/148 (25%), Positives = 67/148 (45%)

Query:    29 KPKDPTFQLISIKLTSFKLKFP--VLD---AEVILTVHV----VNPNITPIKYSSTTMSI 79
             KPK P F L  + +    +  P  VLD   A + LT+ +    VNPN   I+Y  ++ ++
Sbjct:    67 KPKKPQFDLQQVAVVYMGISNPSAVLDPTTASLSLTIRMLFTAVNPNKVGIRYGESSFTV 126

Query:    80 FYEGSLLGSAPVKAGSQAAGSCQLLHIPARLDGLELAH-HARKFFADVAKREML-FEAKV 137
              Y+G  LG A V    Q A S + +     +D + L   HA     D +  + +    + 
Sbjct:   127 MYKGMPLGRATVPGFYQDAHSTKNVEATISVDRVNLMQAHAADLVRDASLNDRVELTVRG 186

Query:   138 DIEGTAKVLWWDHK-FKIHVDSHVTVDP 164
             D+    +V+ +D    ++ V+  + + P
Sbjct:   187 DVGAKIRVMNFDSPGVQVSVNCGIGISP 214


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.136   0.408    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      183       170   0.00086  108 3  11 22  0.38    32
                                                     31  0.47    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  592 (63 KB)
  Total size of DFA:  156 KB (2093 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.04u 0.21s 14.25t   Elapsed:  00:00:01
  Total cpu time:  14.04u 0.21s 14.25t   Elapsed:  00:00:01
  Start:  Fri May 10 08:22:04 2013   End:  Fri May 10 08:22:05 2013

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