Query 030104
Match_columns 183
No_of_seqs 205 out of 2062
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 13:41:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030104.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030104hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1tq1_A AT5G66040, senescence-a 100.0 3.5E-28 1.2E-32 174.9 10.7 116 68-183 13-129 (129)
2 3iwh_A Rhodanese-like domain p 100.0 1.7E-28 5.9E-33 170.2 8.0 98 73-183 2-102 (103)
3 3gk5_A Uncharacterized rhodane 99.9 2.7E-27 9.2E-32 165.4 11.4 98 72-183 3-101 (108)
4 3foj_A Uncharacterized protein 99.9 1.4E-27 4.6E-32 164.5 8.4 96 73-181 2-100 (100)
5 3eme_A Rhodanese-like domain p 99.9 1.9E-27 6.5E-32 164.6 8.5 98 73-183 2-102 (103)
6 1gmx_A GLPE protein; transfera 99.9 1.4E-26 4.7E-31 161.5 9.5 98 72-182 4-103 (108)
7 3hix_A ALR3790 protein; rhodan 99.9 1.2E-26 4E-31 161.5 8.7 94 79-183 2-99 (106)
8 3d1p_A Putative thiosulfate su 99.9 1E-25 3.5E-30 163.7 12.4 113 70-183 20-138 (139)
9 3ilm_A ALR3790 protein; rhodan 99.9 5.9E-26 2E-30 165.8 10.1 97 75-182 2-102 (141)
10 2hhg_A Hypothetical protein RP 99.9 1.6E-25 5.5E-30 162.5 10.9 102 70-183 19-133 (139)
11 1qxn_A SUD, sulfide dehydrogen 99.9 1.1E-25 3.9E-30 163.5 9.7 103 70-182 20-128 (137)
12 3flh_A Uncharacterized protein 99.9 2.2E-25 7.6E-30 159.2 8.3 98 73-183 15-119 (124)
13 1wv9_A Rhodanese homolog TT165 99.9 5.3E-26 1.8E-30 154.8 4.8 92 73-178 2-94 (94)
14 3nhv_A BH2092 protein; alpha-b 99.9 4.8E-25 1.6E-29 161.5 7.8 99 73-183 16-120 (144)
15 2k0z_A Uncharacterized protein 99.9 2E-24 6.9E-29 151.1 6.8 86 85-183 14-102 (110)
16 1e0c_A Rhodanese, sulfurtransf 99.9 2.8E-23 9.5E-28 166.1 12.0 137 46-183 110-271 (271)
17 2fsx_A RV0390, COG0607: rhodan 99.9 1.7E-23 6E-28 153.6 9.0 108 72-182 4-138 (148)
18 1urh_A 3-mercaptopyruvate sulf 99.9 2.6E-23 9E-28 167.1 10.7 138 46-183 115-278 (280)
19 1t3k_A Arath CDC25, dual-speci 99.9 4.5E-24 1.5E-28 157.6 4.4 106 70-183 25-141 (152)
20 1rhs_A Sulfur-substituted rhod 99.9 7E-23 2.4E-27 166.0 11.6 137 46-182 123-287 (296)
21 3i2v_A Adenylyltransferase and 99.9 1.5E-23 5E-28 149.5 6.5 106 74-183 2-125 (127)
22 1e0c_A Rhodanese, sulfurtransf 99.9 1.1E-22 3.8E-27 162.6 12.1 112 72-183 8-129 (271)
23 3olh_A MST, 3-mercaptopyruvate 99.9 9.2E-23 3.1E-27 166.0 11.7 137 46-182 138-300 (302)
24 3g5j_A Putative ATP/GTP bindin 99.9 4.1E-23 1.4E-27 148.2 7.6 103 72-177 4-130 (134)
25 1uar_A Rhodanese; sulfurtransf 99.9 2.8E-22 9.7E-27 161.3 13.2 138 46-183 108-282 (285)
26 3hzu_A Thiosulfate sulfurtrans 99.9 2.6E-22 8.9E-27 164.5 13.2 137 46-183 140-308 (318)
27 3hzu_A Thiosulfate sulfurtrans 99.9 2E-22 6.9E-27 165.1 11.1 112 72-183 39-159 (318)
28 2jtq_A Phage shock protein E; 99.9 4.3E-23 1.5E-27 137.7 5.6 76 88-176 2-80 (85)
29 1urh_A 3-mercaptopyruvate sulf 99.9 2.6E-22 8.8E-27 161.3 10.7 111 72-182 3-133 (280)
30 3aay_A Putative thiosulfate su 99.9 9.4E-22 3.2E-26 157.7 13.0 137 46-183 106-275 (277)
31 1vee_A Proline-rich protein fa 99.9 2E-22 6.9E-27 145.6 7.7 105 72-182 4-123 (134)
32 3tp9_A Beta-lactamase and rhod 99.9 6.1E-22 2.1E-26 169.9 10.7 121 44-183 352-474 (474)
33 1yt8_A Thiosulfate sulfurtrans 99.9 1.6E-21 5.6E-26 169.9 12.6 126 46-183 349-477 (539)
34 3aay_A Putative thiosulfate su 99.9 9.7E-22 3.3E-26 157.6 10.3 111 73-183 6-125 (277)
35 1rhs_A Sulfur-substituted rhod 99.9 2.9E-21 1E-25 156.5 12.2 112 72-183 7-142 (296)
36 1c25_A CDC25A; hydrolase, cell 99.9 1.6E-21 5.4E-26 144.8 8.7 101 70-181 20-145 (161)
37 2a2k_A M-phase inducer phospha 99.9 2.9E-21 9.8E-26 145.3 10.0 101 70-181 21-147 (175)
38 1uar_A Rhodanese; sulfurtransf 99.9 1E-21 3.4E-26 158.1 7.9 110 73-182 8-126 (285)
39 2vsw_A Dual specificity protei 99.8 9.7E-22 3.3E-26 144.7 6.9 108 72-179 3-129 (153)
40 3olh_A MST, 3-mercaptopyruvate 99.8 7.8E-21 2.7E-25 154.6 12.6 114 70-183 19-157 (302)
41 3op3_A M-phase inducer phospha 99.8 5.8E-21 2E-25 148.5 11.3 97 70-177 54-176 (216)
42 4f67_A UPF0176 protein LPG2838 99.8 3.7E-21 1.3E-25 153.6 10.4 102 70-179 119-224 (265)
43 1qb0_A Protein (M-phase induce 99.8 4E-21 1.4E-25 148.9 10.2 101 70-181 41-167 (211)
44 2j6p_A SB(V)-AS(V) reductase; 99.8 7.3E-21 2.5E-25 140.3 9.5 102 72-181 4-120 (152)
45 2eg4_A Probable thiosulfate su 99.8 6.7E-21 2.3E-25 149.1 8.9 98 74-183 122-230 (230)
46 2ouc_A Dual specificity protei 99.8 6.4E-21 2.2E-25 137.9 7.7 106 74-181 2-136 (142)
47 1okg_A Possible 3-mercaptopyru 99.8 8.2E-21 2.8E-25 158.7 8.9 109 72-182 13-142 (373)
48 2wlr_A Putative thiosulfate su 99.8 3E-20 1E-24 157.4 12.2 138 46-183 231-406 (423)
49 1yt8_A Thiosulfate sulfurtrans 99.8 2.3E-20 7.7E-25 162.7 10.4 100 72-182 6-109 (539)
50 2wlr_A Putative thiosulfate su 99.8 3.3E-20 1.1E-24 157.2 10.2 111 73-183 124-250 (423)
51 3f4a_A Uncharacterized protein 99.8 6.5E-21 2.2E-25 143.0 3.7 107 70-182 28-157 (169)
52 1hzm_A Dual specificity protei 99.8 2.3E-20 7.7E-25 137.4 5.4 105 71-177 14-142 (154)
53 1okg_A Possible 3-mercaptopyru 99.8 1.7E-20 5.9E-25 156.7 4.2 97 85-181 172-292 (373)
54 3ics_A Coenzyme A-disulfide re 99.8 1.5E-19 5E-24 158.5 8.7 95 70-177 486-581 (588)
55 3tg1_B Dual specificity protei 99.8 5.6E-19 1.9E-23 130.9 10.4 104 69-177 7-142 (158)
56 3ntd_A FAD-dependent pyridine 99.8 9.1E-20 3.1E-24 158.8 4.9 91 74-178 474-565 (565)
57 3utn_X Thiosulfate sulfurtrans 99.8 5.8E-18 2E-22 139.0 11.8 107 74-180 185-319 (327)
58 3tp9_A Beta-lactamase and rhod 99.7 1.3E-18 4.3E-23 149.2 5.1 121 50-182 246-371 (474)
59 3utn_X Thiosulfate sulfurtrans 99.7 2.3E-17 7.8E-22 135.4 11.4 112 70-182 25-159 (327)
60 2eg4_A Probable thiosulfate su 99.7 1.1E-17 3.7E-22 130.8 8.6 92 86-182 5-102 (230)
61 3r2u_A Metallo-beta-lactamase 99.7 4.2E-19 1.4E-23 152.2 0.0 85 80-176 379-465 (466)
62 2gwf_A Ubiquitin carboxyl-term 99.7 2.2E-17 7.4E-22 122.3 8.3 110 70-181 17-149 (157)
63 1whb_A KIAA0055; deubiqutinati 99.7 2.5E-17 8.6E-22 121.8 8.6 109 69-181 11-144 (157)
64 3r2u_A Metallo-beta-lactamase 99.5 9.6E-14 3.3E-18 118.9 7.4 80 85-175 294-375 (466)
65 2f46_A Hypothetical protein; s 98.3 2.5E-06 8.7E-11 62.2 7.7 83 75-162 30-129 (156)
66 4erc_A Dual specificity protei 95.5 0.024 8.2E-07 39.9 5.5 82 77-162 25-117 (150)
67 2img_A Dual specificity protei 94.6 0.063 2.2E-06 37.6 5.5 83 76-162 25-118 (151)
68 1xri_A AT1G05000; structural g 93.7 0.14 4.8E-06 36.1 5.8 84 78-162 24-120 (151)
69 3ezz_A Dual specificity protei 93.2 0.26 9E-06 34.3 6.5 81 81-162 23-110 (144)
70 1v8c_A MOAD related protein; r 93.2 0.012 4.1E-07 43.3 -0.7 22 88-113 122-143 (168)
71 2nt2_A Protein phosphatase sli 93.1 0.14 4.7E-06 35.9 4.8 80 80-162 22-110 (145)
72 1yz4_A DUSP15, dual specificit 91.7 0.28 9.7E-06 34.9 5.1 79 81-162 27-113 (160)
73 2hcm_A Dual specificity protei 91.6 0.21 7.1E-06 35.8 4.3 77 81-162 31-118 (164)
74 1fpz_A Cyclin-dependent kinase 91.6 0.39 1.3E-05 36.0 6.0 74 76-153 60-150 (212)
75 3s4e_A Dual specificity protei 90.9 0.42 1.4E-05 33.3 5.3 80 81-162 23-110 (144)
76 1wrm_A Dual specificity phosph 90.9 0.43 1.5E-05 34.2 5.4 81 81-162 26-112 (165)
77 2r0b_A Serine/threonine/tyrosi 90.8 0.72 2.5E-05 32.4 6.5 84 79-162 25-119 (154)
78 2esb_A Dual specificity protei 90.0 0.59 2E-05 34.4 5.6 78 83-162 41-126 (188)
79 3f81_A Dual specificity protei 89.8 0.48 1.6E-05 34.4 5.0 81 82-162 48-144 (183)
80 2wgp_A Dual specificity protei 89.5 0.6 2.1E-05 34.4 5.3 80 81-162 45-132 (190)
81 3rgo_A Protein-tyrosine phosph 88.9 0.52 1.8E-05 33.1 4.4 79 80-162 20-118 (157)
82 1zzw_A Dual specificity protei 88.7 0.52 1.8E-05 33.0 4.3 28 135-162 81-112 (149)
83 2e0t_A Dual specificity phosph 88.5 0.36 1.2E-05 33.9 3.4 27 136-162 84-114 (151)
84 1ywf_A Phosphotyrosine protein 88.4 2.2 7.4E-05 33.9 8.2 42 72-113 53-101 (296)
85 2g6z_A Dual specificity protei 87.9 0.71 2.4E-05 34.9 4.8 77 85-162 29-112 (211)
86 2pq5_A Dual specificity protei 87.3 2.4 8.4E-05 31.4 7.5 27 136-162 130-160 (205)
87 2y96_A Dual specificity phosph 86.8 2.8 9.7E-05 31.5 7.7 28 135-162 137-168 (219)
88 3emu_A Leucine rich repeat and 86.1 0.64 2.2E-05 33.3 3.5 28 135-162 85-116 (161)
89 2hxp_A Dual specificity protei 85.4 0.7 2.4E-05 32.7 3.4 79 80-162 24-114 (155)
90 3s4o_A Protein tyrosine phosph 85.0 4.8 0.00016 28.1 7.8 27 136-162 108-138 (167)
91 3rz2_A Protein tyrosine phosph 85.0 6 0.00021 28.7 8.6 83 75-162 48-145 (189)
92 2oud_A Dual specificity protei 84.5 1.3 4.5E-05 32.0 4.6 28 135-162 85-116 (177)
93 2jgn_A DBX, DDX3, ATP-dependen 83.9 2 7E-05 31.2 5.5 46 126-172 35-81 (185)
94 2q05_A Late protein H1, dual s 82.4 2.5 8.4E-05 31.1 5.5 74 88-162 75-154 (195)
95 2i6j_A Ssoptp, sulfolobus solf 80.4 3.2 0.00011 29.0 5.3 71 77-152 18-105 (161)
96 1yn9_A BVP, polynucleotide 5'- 79.7 4.6 0.00016 28.6 6.0 27 136-162 112-142 (169)
97 3cm3_A Late protein H1, dual s 79.4 2.4 8.1E-05 30.5 4.4 27 136-162 107-137 (176)
98 2j16_A SDP-1, tyrosine-protein 79.1 2.9 9.8E-05 30.7 4.8 73 88-162 67-146 (182)
99 1jzt_A Hypothetical 27.5 kDa p 76.1 6.2 0.00021 30.4 6.1 28 138-166 59-90 (246)
100 2rb4_A ATP-dependent RNA helic 73.5 7.7 0.00026 27.5 5.8 35 136-171 33-68 (175)
101 3nme_A Ptpkis1 protein, SEX4 g 72.8 3.5 0.00012 32.5 4.0 86 77-162 29-135 (294)
102 3d3k_A Enhancer of mRNA-decapp 72.7 4.2 0.00014 31.6 4.4 28 138-166 86-117 (259)
103 1ohe_A CDC14B, CDC14B2 phospha 71.5 26 0.00088 28.3 9.0 80 78-162 209-298 (348)
104 2o8n_A APOA-I binding protein; 71.0 4.6 0.00016 31.5 4.3 28 138-166 80-111 (265)
105 3d3j_A Enhancer of mRNA-decapp 70.7 4.8 0.00016 32.1 4.4 28 138-166 133-164 (306)
106 1t5i_A C_terminal domain of A 70.0 9.4 0.00032 27.1 5.5 43 127-171 22-65 (172)
107 3gxh_A Putative phosphatase (D 69.3 26 0.00089 24.4 9.2 84 74-162 27-124 (157)
108 1fuk_A Eukaryotic initiation f 68.6 11 0.00036 26.4 5.5 44 126-171 20-64 (165)
109 2hjv_A ATP-dependent RNA helic 68.2 5.1 0.00017 28.1 3.7 35 136-171 34-69 (163)
110 4a29_A Engineered retro-aldol 67.7 9 0.00031 29.8 5.2 88 75-164 137-230 (258)
111 1rxd_A Protein tyrosine phosph 67.0 27 0.00093 23.8 9.7 87 71-162 23-124 (159)
112 3rss_A Putative uncharacterize 66.5 11 0.00036 32.3 5.9 29 136-165 51-83 (502)
113 2i4i_A ATP-dependent RNA helic 66.4 9.4 0.00032 30.6 5.4 45 126-171 265-310 (417)
114 2c46_A MRNA capping enzyme; ph 60.0 42 0.0014 25.4 7.8 85 74-162 66-170 (241)
115 3hh1_A Tetrapyrrole methylase 59.5 20 0.00069 23.8 5.3 93 70-169 16-116 (117)
116 4fak_A Ribosomal RNA large sub 58.2 15 0.0005 26.5 4.5 44 129-172 66-115 (163)
117 2v1x_A ATP-dependent DNA helic 58.0 14 0.00049 31.9 5.3 35 136-171 266-301 (591)
118 2p6n_A ATP-dependent RNA helic 57.7 15 0.00051 26.6 4.7 34 137-171 54-88 (191)
119 3to5_A CHEY homolog; alpha(5)b 56.5 23 0.0008 24.1 5.3 41 135-175 10-51 (134)
120 3eaq_A Heat resistant RNA depe 56.5 9.6 0.00033 28.1 3.5 35 136-171 30-65 (212)
121 2l17_A Synarsc, arsenate reduc 54.3 9.3 0.00032 26.3 2.9 35 138-172 5-41 (134)
122 3v0d_A Voltage-sensor containi 53.9 37 0.0013 27.3 6.8 79 76-158 51-142 (339)
123 3rh0_A Arsenate reductase; oxi 52.6 7.1 0.00024 27.6 2.1 35 138-172 21-57 (148)
124 4etn_A LMPTP, low molecular we 51.5 3.3 0.00011 30.5 0.2 38 137-175 34-77 (184)
125 3i32_A Heat resistant RNA depe 49.6 19 0.00065 28.3 4.3 43 127-171 19-62 (300)
126 3kwp_A Predicted methyltransfe 49.4 53 0.0018 25.8 6.9 105 70-181 26-140 (296)
127 1s4d_A Uroporphyrin-III C-meth 48.3 80 0.0027 24.3 7.8 108 70-181 25-143 (280)
128 1jl3_A Arsenate reductase; alp 47.9 18 0.00061 24.9 3.5 35 138-172 4-40 (139)
129 3nbm_A PTS system, lactose-spe 47.4 15 0.00052 24.4 3.0 24 135-158 4-27 (108)
130 3ohg_A Uncharacterized protein 47.3 18 0.00062 28.5 3.8 25 147-171 218-243 (285)
131 3n0a_A Tyrosine-protein phosph 44.8 1.2E+02 0.0041 24.6 8.5 71 86-161 62-142 (361)
132 1xti_A Probable ATP-dependent 44.4 42 0.0014 26.3 5.7 42 128-171 242-284 (391)
133 2d7d_A Uvrabc system protein B 43.5 34 0.0011 30.0 5.3 43 128-171 436-479 (661)
134 1jf8_A Arsenate reductase; ptp 43.4 23 0.00079 24.1 3.5 36 138-173 4-41 (131)
135 1wyz_A Putative S-adenosylmeth 43.2 43 0.0015 25.2 5.4 94 74-169 20-120 (242)
136 1to0_A Hypothetical UPF0247 pr 43.0 33 0.0011 24.7 4.4 46 128-173 61-112 (167)
137 1p8a_A Protein tyrosine phosph 42.4 2.9 9.9E-05 29.4 -1.4 37 138-174 5-43 (146)
138 3tsm_A IGPS, indole-3-glycerol 42.4 39 0.0013 26.3 5.0 82 76-164 154-246 (272)
139 1s2m_A Putative ATP-dependent 41.7 35 0.0012 27.0 4.9 42 128-171 250-292 (400)
140 1wp9_A ATP-dependent RNA helic 41.5 38 0.0013 27.1 5.1 34 135-169 359-393 (494)
141 2yjt_D ATP-dependent RNA helic 46.9 5.8 0.0002 28.0 0.0 36 136-172 29-65 (170)
142 2wmy_A WZB, putative acid phos 40.6 16 0.00055 25.6 2.3 35 138-173 9-45 (150)
143 1c4o_A DNA nucleotide excision 40.5 31 0.0011 30.3 4.6 37 134-171 436-473 (664)
144 1oyw_A RECQ helicase, ATP-depe 40.5 23 0.0008 30.0 3.8 36 136-172 235-271 (523)
145 2wja_A Putative acid phosphata 38.6 17 0.00059 26.1 2.3 35 138-173 27-63 (168)
146 3pey_A ATP-dependent RNA helic 38.2 54 0.0018 25.6 5.5 35 136-171 242-277 (395)
147 1o6d_A Hypothetical UPF0247 pr 38.2 42 0.0014 24.1 4.3 47 128-175 56-108 (163)
148 2g3w_A YAEQ protein, hypotheti 38.0 83 0.0028 23.0 5.9 42 122-166 87-131 (182)
149 1vkr_A Mannitol-specific PTS s 37.4 22 0.00076 24.2 2.6 25 137-161 13-43 (125)
150 3eiq_A Eukaryotic initiation f 37.2 42 0.0014 26.6 4.7 44 127-172 271-315 (414)
151 1jdq_A TM006 protein, hypothet 37.1 83 0.0028 20.3 6.2 38 125-162 41-79 (98)
152 2fek_A Low molecular weight pr 36.9 20 0.00069 25.7 2.4 35 138-173 23-59 (167)
153 1tvm_A PTS system, galactitol- 36.8 29 0.00099 23.0 3.1 26 137-162 21-52 (113)
154 1hv8_A Putative ATP-dependent 36.5 40 0.0014 26.0 4.4 36 135-171 236-272 (367)
155 1ve2_A Uroporphyrin-III C-meth 36.2 1.3E+02 0.0044 22.2 7.2 108 70-181 13-129 (235)
156 3i5x_A ATP-dependent RNA helic 35.9 47 0.0016 27.9 5.0 36 135-171 337-376 (563)
157 3fht_A ATP-dependent RNA helic 35.3 31 0.001 27.3 3.5 35 136-171 265-300 (412)
158 1y1l_A Arsenate reductase (ARS 35.1 35 0.0012 22.9 3.3 33 139-172 1-35 (124)
159 2ybo_A Methyltransferase; SUMT 34.1 86 0.0029 24.3 5.9 108 70-181 35-153 (294)
160 3czc_A RMPB; alpha/beta sandwi 33.9 37 0.0013 22.2 3.3 25 138-162 19-49 (110)
161 4h3k_B RNA polymerase II subun 33.8 45 0.0015 25.0 3.9 29 138-167 26-56 (214)
162 3fwz_A Inner membrane protein 33.3 49 0.0017 22.2 3.9 28 141-169 10-38 (140)
163 1e2b_A Enzyme IIB-cellobiose; 33.0 23 0.00079 23.3 2.0 25 138-162 4-33 (106)
164 3k5w_A Carbohydrate kinase; 11 32.8 51 0.0017 27.8 4.6 31 133-165 42-76 (475)
165 2l2q_A PTS system, cellobiose- 32.7 16 0.00055 24.0 1.2 27 136-162 3-34 (109)
166 2j0s_A ATP-dependent RNA helic 32.3 45 0.0015 26.5 4.1 34 137-171 276-310 (410)
167 3ndc_A Precorrin-4 C(11)-methy 32.3 1.6E+02 0.0053 22.4 7.1 92 70-169 14-112 (264)
168 3sqw_A ATP-dependent RNA helic 32.3 57 0.002 27.7 4.9 36 135-171 286-325 (579)
169 3o8b_A HCV NS3 protease/helica 29.0 46 0.0016 29.4 3.8 36 136-172 395-431 (666)
170 2db3_A ATP-dependent RNA helic 28.1 97 0.0033 25.1 5.5 32 139-171 302-334 (434)
171 3t38_A Arsenate reductase; low 28.0 40 0.0014 25.2 2.9 36 136-171 80-117 (213)
172 1ns5_A Hypothetical protein YB 27.9 56 0.0019 23.2 3.5 44 129-174 59-108 (155)
173 1vdm_A Purine phosphoribosyltr 27.7 54 0.0019 22.4 3.4 30 136-165 82-115 (153)
174 2p1z_A Phosphoribosyltransfera 27.3 76 0.0026 22.6 4.2 47 135-181 112-168 (180)
175 3llv_A Exopolyphosphatase-rela 26.0 78 0.0027 20.9 3.9 28 141-169 9-37 (141)
176 4e16_A Precorrin-4 C(11)-methy 26.0 2.1E+02 0.0071 21.4 7.0 92 70-169 15-113 (253)
177 1zat_A L,D-transpeptidase; L,D 25.8 44 0.0015 25.3 2.8 27 105-143 224-250 (250)
178 2c5s_A THII, probable thiamine 25.4 40 0.0014 27.7 2.6 27 136-162 186-213 (413)
179 4gl2_A Interferon-induced heli 24.9 1E+02 0.0035 26.6 5.3 33 137-170 400-439 (699)
180 3jux_A Protein translocase sub 24.7 70 0.0024 29.0 4.2 36 136-172 473-509 (822)
181 1vch_A Phosphoribosyltransfera 24.5 67 0.0023 22.5 3.4 30 136-165 119-152 (175)
182 1va0_A Uroporphyrin-III C-meth 24.4 2.1E+02 0.0073 21.0 7.2 95 70-169 11-111 (239)
183 1d5r_A Phosphoinositide phosph 24.0 77 0.0026 25.0 4.0 61 87-151 58-126 (324)
184 2geb_A Hypoxanthine-guanine ph 24.0 81 0.0028 22.5 3.8 30 136-165 97-130 (185)
185 2yzk_A OPRT, oprtase, orotate 23.9 86 0.0029 22.2 3.9 46 136-181 105-160 (178)
186 3m3h_A OPRT, oprtase, orotate 23.8 1E+02 0.0035 23.3 4.5 47 135-181 135-192 (234)
187 1wd5_A Hypothetical protein TT 23.6 98 0.0034 22.5 4.3 31 136-166 119-153 (208)
188 1z5z_A Helicase of the SNF2/RA 23.4 75 0.0026 24.3 3.8 36 135-171 110-147 (271)
189 1i5e_A Uracil phosphoribosyltr 23.3 1.2E+02 0.004 22.3 4.7 31 136-166 123-157 (209)
190 1pjq_A CYSG, siroheme synthase 23.2 1.9E+02 0.0066 23.9 6.5 97 70-169 226-329 (457)
191 1yks_A Genome polyprotein [con 23.2 86 0.0029 25.7 4.3 32 137-169 177-209 (440)
192 1hgx_A HGXPRTASE, hypoxanthine 22.6 90 0.0031 22.1 3.9 30 136-165 94-127 (183)
193 1zn8_A APRT, adenine phosphori 22.4 77 0.0026 22.3 3.4 30 136-165 119-152 (180)
194 1jbe_A Chemotaxis protein CHEY 22.4 1.5E+02 0.0051 18.5 5.2 31 139-169 6-37 (128)
195 3lvj_C Sulfurtransferase TUSA; 22.1 1.4E+02 0.0049 18.2 6.1 37 126-162 26-63 (82)
196 1dku_A Protein (phosphoribosyl 21.9 1E+02 0.0036 24.3 4.4 33 136-168 216-252 (317)
197 3c0u_A Uncharacterized protein 21.8 88 0.003 22.9 3.6 42 122-166 89-133 (183)
198 1yfz_A Hypoxanthine-guanine ph 21.6 94 0.0032 22.5 3.8 30 136-165 117-150 (205)
199 3e8x_A Putative NAD-dependent 21.5 1.1E+02 0.0038 22.1 4.3 32 136-168 20-52 (236)
200 2der_A TRNA-specific 2-thiouri 21.4 71 0.0024 26.0 3.4 27 136-162 16-43 (380)
201 3dez_A OPRT, oprtase, orotate 21.3 96 0.0033 23.6 3.9 48 134-181 146-204 (243)
202 4etm_A LMPTP, low molecular we 21.1 50 0.0017 23.7 2.1 37 138-174 19-62 (173)
203 1je3_A EC005, hypothetical 8.6 21.0 1E+02 0.0035 19.8 3.5 38 125-162 42-80 (97)
204 3jx9_A Putative phosphoheptose 20.9 1.3E+02 0.0044 21.5 4.4 31 133-163 74-107 (170)
205 3sho_A Transcriptional regulat 20.8 1.4E+02 0.0046 20.8 4.5 44 124-168 26-72 (187)
206 2dy0_A APRT, adenine phosphori 20.8 86 0.0029 22.4 3.4 47 135-181 124-181 (190)
207 2b4a_A BH3024; flavodoxin-like 20.7 1.7E+02 0.0057 18.6 4.8 38 136-174 14-52 (138)
208 1wy5_A TILS, hypothetical UPF0 20.6 1.1E+02 0.0037 23.9 4.3 38 134-171 21-65 (317)
209 3oiy_A Reverse gyrase helicase 20.6 1.2E+02 0.0043 24.0 4.7 43 125-170 242-286 (414)
210 1tc1_A Protein (hypoxanthine p 20.6 1E+02 0.0034 22.9 3.8 30 136-165 102-135 (220)
211 1pdo_A Mannose permease; phosp 20.3 2E+02 0.0069 19.2 6.0 44 125-169 46-91 (135)
212 1y0b_A Xanthine phosphoribosyl 20.2 89 0.0031 22.4 3.4 31 135-165 118-152 (197)
213 3mm4_A Histidine kinase homolo 20.2 1.6E+02 0.0053 20.9 4.8 38 137-174 61-99 (206)
No 1
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=99.95 E-value=3.5e-28 Score=174.93 Aligned_cols=116 Identities=66% Similarity=1.100 Sum_probs=101.7
Q ss_pred cCCCCcccCHHHHHHHHhCCCEEEEcCChhhHhccCCCCceecCcccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCc
Q 030104 68 AVGVPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSG 147 (183)
Q Consensus 68 ~~~~~~~i~~~~~~~~~~~~~~lIDvR~~~e~~~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g 147 (183)
.......|+++++.++++++++|||||++.||..||||||+|||+......+...+.+++++....++++++|||||.+|
T Consensus 13 ~~~~~~~is~~e~~~~l~~~~~lIDvR~~~e~~~ghIpgAinip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivvyC~~G 92 (129)
T 1tq1_A 13 ESRVPSSVSVTVAHDLLLAGHRYLDVRTPEEFSQGHACGAINVPYMNRGASGMSKNTDFLEQVSSHFGQSDNIIVGCQSG 92 (129)
T ss_dssp CSCCCEEEEHHHHHHHHHHTCCEEEESCHHHHHHCCBTTBEECCSCCCSTTTCCCTTTHHHHHTTTCCTTSSEEEEESSC
T ss_pred hcCCCcccCHHHHHHHhcCCCEEEECCCHHHHhcCCCCCcEECcHhhcccccccCCHHHHHHHHhhCCCCCeEEEECCCC
Confidence 34566789999999988877899999999999999999999999965544455555677788777788999999999999
Q ss_pred hHHHHHHHHHH-cCCCCeeEccccHHHhhhCCCCCCC
Q 030104 148 KRSMMAATDLL-NGFAGITDIAGGFAAWRQNGLPTEP 183 (183)
Q Consensus 148 ~~s~~a~~~L~-~G~~~v~~l~GG~~~W~~~g~pv~~ 183 (183)
.||..+++.|. .||++|++|+||+.+|.++|+|+++
T Consensus 93 ~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 129 (129)
T 1tq1_A 93 GRSIKATTDLLHAGFTGVKDIVGGYSAWAKNGLPTKA 129 (129)
T ss_dssp SHHHHHHHHHHHHHCCSEEEEECCHHHHHHHTCCCC-
T ss_pred cHHHHHHHHHHHcCCCCeEEeCCcHHHHHhCCCCCCC
Confidence 99999999999 9999999999999999999999874
No 2
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=99.95 E-value=1.7e-28 Score=170.24 Aligned_cols=98 Identities=27% Similarity=0.417 Sum_probs=86.5
Q ss_pred cccCHHHHHHHHhCC--CEEEEcCChhhHhccCCCCceecCcccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCchHH
Q 030104 73 TSVPVRVAHELLQAG--HRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRS 150 (183)
Q Consensus 73 ~~i~~~~~~~~~~~~--~~lIDvR~~~e~~~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~~s 150 (183)
..|+++++++++.++ ++|||||++.||..||||||+|||++ .+......++++++|||||.+|.||
T Consensus 2 k~Is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~------------~l~~~~~~l~~~~~ivv~C~~G~rS 69 (103)
T 3iwh_A 2 KSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAKLIPMD------------TIPDNLNSFNKNEIYYIVCAGGVRS 69 (103)
T ss_dssp CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEECCGG------------GGGGCGGGCCTTSEEEEECSSSSHH
T ss_pred CCcCHHHHHHHHhCCCCeEEEECCChhHHhcCccCCcccCccc------------chhhhhhhhcCCCeEEEECCCCHHH
Confidence 468999999877554 89999999999999999999999994 3444556788999999999999999
Q ss_pred HHHHHHHH-cCCCCeeEccccHHHhhhCCCCCCC
Q 030104 151 MMAATDLL-NGFAGITDIAGGFAAWRQNGLPTEP 183 (183)
Q Consensus 151 ~~a~~~L~-~G~~~v~~l~GG~~~W~~~g~pv~~ 183 (183)
..++..|. .||++ ++|.||+.+|.++|+|+++
T Consensus 70 ~~aa~~L~~~G~~~-~~l~GG~~~W~~~g~pves 102 (103)
T 3iwh_A 70 AKVVEYLEANGIDA-VNVEGGMHAWGDEGLEIKS 102 (103)
T ss_dssp HHHHHHHHTTTCEE-EEETTHHHHHCSSSCBCCC
T ss_pred HHHHHHHHHcCCCE-EEecChHHHHHHCCCccee
Confidence 99999999 99965 4699999999999999985
No 3
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=99.95 E-value=2.7e-27 Score=165.36 Aligned_cols=98 Identities=30% Similarity=0.429 Sum_probs=90.7
Q ss_pred CcccCHHHHHHHHhCCCEEEEcCChhhHhccCCCCceecCcccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCchHHH
Q 030104 72 PTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSM 151 (183)
Q Consensus 72 ~~~i~~~~~~~~~~~~~~lIDvR~~~e~~~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~~s~ 151 (183)
...|+++++.+++++ ++|||||++.||..||||||+|+|+ ..+......++++++||+||.+|.||.
T Consensus 3 ~~~is~~el~~~l~~-~~iiDvR~~~e~~~ghIpgA~~ip~------------~~l~~~~~~l~~~~~ivvyC~~G~rs~ 69 (108)
T 3gk5_A 3 YRSINAADLYENIKA-YTVLDVREPFELIFGSIANSINIPI------------SELREKWKILERDKKYAVICAHGNRSA 69 (108)
T ss_dssp CCEECHHHHHHTTTT-CEEEECSCHHHHTTCBCTTCEECCH------------HHHHHHGGGSCTTSCEEEECSSSHHHH
T ss_pred ccEeCHHHHHHHHcC-CEEEECCCHHHHhcCcCCCCEEcCH------------HHHHHHHHhCCCCCeEEEEcCCCcHHH
Confidence 457899999998877 9999999999999999999999999 566777788899999999999999999
Q ss_pred HHHHHHH-cCCCCeeEccccHHHhhhCCCCCCC
Q 030104 152 MAATDLL-NGFAGITDIAGGFAAWRQNGLPTEP 183 (183)
Q Consensus 152 ~a~~~L~-~G~~~v~~l~GG~~~W~~~g~pv~~ 183 (183)
.+++.|+ .|| +|++|+||+.+|.++|.|+++
T Consensus 70 ~aa~~L~~~G~-~v~~l~GG~~~W~~~~~~~~~ 101 (108)
T 3gk5_A 70 AAVEFLSQLGL-NIVDVEGGIQSWIEEGYPVVL 101 (108)
T ss_dssp HHHHHHHTTTC-CEEEETTHHHHHHHTTCCCBC
T ss_pred HHHHHHHHcCC-CEEEEcCcHHHHHHcCCCCCC
Confidence 9999999 999 999999999999999999874
No 4
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=99.94 E-value=1.4e-27 Score=164.51 Aligned_cols=96 Identities=25% Similarity=0.405 Sum_probs=85.9
Q ss_pred cccCHHHHHHHHh--CCCEEEEcCChhhHhccCCCCceecCcccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCchHH
Q 030104 73 TSVPVRVAHELLQ--AGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRS 150 (183)
Q Consensus 73 ~~i~~~~~~~~~~--~~~~lIDvR~~~e~~~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~~s 150 (183)
+.|+++++.++++ ++++|||||++.||..||||||+|+|+. .+......++++++||+||.+|.||
T Consensus 2 ~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~------------~l~~~~~~l~~~~~ivvyC~~g~rs 69 (100)
T 3foj_A 2 ESITVTELKEKILDANPVNIVDVRTDQETAMGIIPGAETIPMN------------SIPDNLNYFNDNETYYIICKAGGRS 69 (100)
T ss_dssp CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEECCGG------------GGGGCGGGSCTTSEEEEECSSSHHH
T ss_pred CccCHHHHHHHHhcCCCcEEEECCCHHHHhcCcCCCCEECCHH------------HHHHHHHhCCCCCcEEEEcCCCchH
Confidence 4688999999884 3499999999999999999999999994 3444556678999999999999999
Q ss_pred HHHHHHHH-cCCCCeeEccccHHHhhhCCCCC
Q 030104 151 MMAATDLL-NGFAGITDIAGGFAAWRQNGLPT 181 (183)
Q Consensus 151 ~~a~~~L~-~G~~~v~~l~GG~~~W~~~g~pv 181 (183)
..+++.|+ .|| +|++|+||+.+|.++|+|+
T Consensus 70 ~~a~~~L~~~G~-~v~~l~GG~~~W~~~g~pv 100 (100)
T 3foj_A 70 AQVVQYLEQNGV-NAVNVEGGMDEFGDEGLEH 100 (100)
T ss_dssp HHHHHHHHTTTC-EEEEETTHHHHHCSSSCBC
T ss_pred HHHHHHHHHCCC-CEEEecccHHHHHHcCCCC
Confidence 99999999 999 9999999999999999986
No 5
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=99.94 E-value=1.9e-27 Score=164.56 Aligned_cols=98 Identities=27% Similarity=0.406 Sum_probs=87.2
Q ss_pred cccCHHHHHHHHh--CCCEEEEcCChhhHhccCCCCceecCcccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCchHH
Q 030104 73 TSVPVRVAHELLQ--AGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRS 150 (183)
Q Consensus 73 ~~i~~~~~~~~~~--~~~~lIDvR~~~e~~~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~~s 150 (183)
+.|+++++.++++ ++++|||||++.||..||||||+|+|+. .+......++++++||+||.+|.+|
T Consensus 2 ~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~------------~l~~~~~~l~~~~~iv~yC~~g~rs 69 (103)
T 3eme_A 2 KSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAKLIPMD------------TIPDNLNSFNKNEIYYIVCAGGVRS 69 (103)
T ss_dssp CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEECCGG------------GGGGCGGGCCTTSEEEEECSSSSHH
T ss_pred CccCHHHHHHHHhcCCCCEEEECCCHHHHhcCcCCCCEEcCHH------------HHHHHHHhCCCCCeEEEECCCChHH
Confidence 4688999999874 3499999999999999999999999994 3344555678899999999999999
Q ss_pred HHHHHHHH-cCCCCeeEccccHHHhhhCCCCCCC
Q 030104 151 MMAATDLL-NGFAGITDIAGGFAAWRQNGLPTEP 183 (183)
Q Consensus 151 ~~a~~~L~-~G~~~v~~l~GG~~~W~~~g~pv~~ 183 (183)
..+++.|. .|| +|++|+||+.+|.++|+|+++
T Consensus 70 ~~a~~~L~~~G~-~v~~l~GG~~~W~~~g~p~~~ 102 (103)
T 3eme_A 70 AKVVEYLEANGI-DAVNVEGGMHAWGDEGLEIKS 102 (103)
T ss_dssp HHHHHHHHTTTC-EEEEETTHHHHHCSSSCBCCC
T ss_pred HHHHHHHHHCCC-CeEEeCCCHHHHHHCCCcCCC
Confidence 99999999 999 999999999999999999874
No 6
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=99.94 E-value=1.4e-26 Score=161.51 Aligned_cols=98 Identities=31% Similarity=0.506 Sum_probs=88.3
Q ss_pred CcccCHHHHHHHHhC-CCEEEEcCChhhHhccCCCCceecCcccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCchHH
Q 030104 72 PTSVPVRVAHELLQA-GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRS 150 (183)
Q Consensus 72 ~~~i~~~~~~~~~~~-~~~lIDvR~~~e~~~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~~s 150 (183)
...|+++++.+++++ +++|||||++.||..||||||+|||+ ..+......++++++|||||.+|.+|
T Consensus 4 ~~~i~~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgA~~ip~------------~~l~~~~~~l~~~~~ivvyc~~g~rs 71 (108)
T 1gmx_A 4 FECINVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQAFHLTN------------DTLGAFMRDNDFDTPVMVMCYHGNSS 71 (108)
T ss_dssp CEEECHHHHHHHHHTTCCEEEECSCHHHHHHCEETTCEECCH------------HHHHHHHHHSCTTSCEEEECSSSSHH
T ss_pred ccccCHHHHHHHHhCCCCEEEEcCCHHHHHhCCCccCEeCCH------------HHHHHHHHhcCCCCCEEEEcCCCchH
Confidence 457899999988875 48999999999999999999999999 45555666688999999999999999
Q ss_pred HHHHHHHH-cCCCCeeEccccHHHhhhCCCCCC
Q 030104 151 MMAATDLL-NGFAGITDIAGGFAAWRQNGLPTE 182 (183)
Q Consensus 151 ~~a~~~L~-~G~~~v~~l~GG~~~W~~~g~pv~ 182 (183)
..+++.|+ .||++|++|+||+.+|.++ +|++
T Consensus 72 ~~a~~~L~~~G~~~v~~l~GG~~~W~~~-~p~~ 103 (108)
T 1gmx_A 72 KGAAQYLLQQGYDVVYSIDGGFEAWQRQ-FPAE 103 (108)
T ss_dssp HHHHHHHHHHTCSSEEEETTHHHHHHHH-CGGG
T ss_pred HHHHHHHHHcCCceEEEecCCHHHHHHh-CCcc
Confidence 99999999 9999999999999999998 8875
No 7
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=99.94 E-value=1.2e-26 Score=161.53 Aligned_cols=94 Identities=31% Similarity=0.533 Sum_probs=77.8
Q ss_pred HHHHHHh---CCCEEEEcCChhhHhccCCCCceecCcccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCchHHHHHHH
Q 030104 79 VAHELLQ---AGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMMAAT 155 (183)
Q Consensus 79 ~~~~~~~---~~~~lIDvR~~~e~~~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~~s~~a~~ 155 (183)
+++++++ .+++|||||++.||..||||||+|||+. ++.......++++++|||||.+|.+|..+++
T Consensus 2 el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi~ip~~-----------~l~~~~~~~l~~~~~ivvyc~~g~rs~~a~~ 70 (106)
T 3hix_A 2 VLKSRLEWGEPAFTILDVRDRSTYNDGHIMGAMAMPIE-----------DLVDRASSSLEKSRDIYVYGAGDEQTSQAVN 70 (106)
T ss_dssp -----------CCEEEECSCHHHHHTCEETTCEECCGG-----------GHHHHHHHHSCTTSCEEEECSSHHHHHHHHH
T ss_pred hHHHHHHcCCCCeEEEECCCHHHHhcCcCCCCEeCCHH-----------HHHHHHHhcCCCCCeEEEEECCCChHHHHHH
Confidence 4555554 2489999999999999999999999995 3444445678899999999999999999999
Q ss_pred HHH-cCCCCeeEccccHHHhhhCCCCCCC
Q 030104 156 DLL-NGFAGITDIAGGFAAWRQNGLPTEP 183 (183)
Q Consensus 156 ~L~-~G~~~v~~l~GG~~~W~~~g~pv~~ 183 (183)
.|+ .||++|++|+||+.+|.++|+|+++
T Consensus 71 ~L~~~G~~~v~~l~GG~~~W~~~g~~~~~ 99 (106)
T 3hix_A 71 LLRSAGFEHVSELKGGLAAWKAIGGPTEL 99 (106)
T ss_dssp HHHHTTCSCEEECTTHHHHHHHTTCCEEE
T ss_pred HHHHcCCcCEEEecCCHHHHHHCCCCCCC
Confidence 999 9999999999999999999999763
No 8
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1e-25 Score=163.72 Aligned_cols=113 Identities=23% Similarity=0.306 Sum_probs=95.0
Q ss_pred CCCcccCHHHHHHHHh---CCCEEEEcCChhhHhccCCCCceecCcccccCCCCCCCHHHHHHHHh--cCCCCCeEEEEc
Q 030104 70 GVPTSVPVRVAHELLQ---AGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVST--RFRKHDEIIVGC 144 (183)
Q Consensus 70 ~~~~~i~~~~~~~~~~---~~~~lIDvR~~~e~~~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~--~l~~~~~ivv~c 144 (183)
.....|+++++.++++ ++++|||||++.||..||||||+|||+..+ ......+.+.+...+. .++++++|||||
T Consensus 20 ~~~~~is~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~ivvyC 98 (139)
T 3d1p_A 20 SNIQSYSFEDMKRIVGKHDPNVVLVDVREPSEYSIVHIPASINVPYRSH-PDAFALDPLEFEKQIGIPKPDSAKELIFYC 98 (139)
T ss_dssp CCCEECCHHHHHHHHHHTCTTEEEEECSCHHHHHHCCCTTCEECCTTTC-TTGGGSCHHHHHHHHSSCCCCTTSEEEEEC
T ss_pred CCcceecHHHHHHHHhCCCCCeEEEECcCHHHHhCCCCCCcEEcCHHHh-hhhccCCHHHHHHHHhccCCCCCCeEEEEC
Confidence 4567899999999886 358999999999999999999999999744 2333334455555554 367889999999
Q ss_pred CCchHHHHHHHHHH-cCCCCeeEccccHHHhhhCCCCCCC
Q 030104 145 QSGKRSMMAATDLL-NGFAGITDIAGGFAAWRQNGLPTEP 183 (183)
Q Consensus 145 ~~g~~s~~a~~~L~-~G~~~v~~l~GG~~~W~~~g~pv~~ 183 (183)
.+|.||..+++.|. .||++|++|+||+.+|.++|+|+.+
T Consensus 99 ~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 138 (139)
T 3d1p_A 99 ASGKRGGEAQKVASSHGYSNTSLYPGSMNDWVSHGGDKLD 138 (139)
T ss_dssp SSSHHHHHHHHHHHTTTCCSEEECTTHHHHHHHTTGGGCC
T ss_pred CCCchHHHHHHHHHHcCCCCeEEeCCcHHHHHHcCCCCCC
Confidence 99999999999999 9999999999999999999999863
No 9
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=99.93 E-value=5.9e-26 Score=165.81 Aligned_cols=97 Identities=30% Similarity=0.507 Sum_probs=86.5
Q ss_pred cCHHHHHHHHhC---CCEEEEcCChhhHhccCCCCceecCcccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCchHHH
Q 030104 75 VPVRVAHELLQA---GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSM 151 (183)
Q Consensus 75 i~~~~~~~~~~~---~~~lIDvR~~~e~~~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~~s~ 151 (183)
|++++++++++. +++|||||++.||..||||||+|||+. ++.......++++++|||||.+|.+|.
T Consensus 2 Is~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi~ip~~-----------~l~~~~~~~l~~~~~ivvyC~~g~rs~ 70 (141)
T 3ilm_A 2 SDAHVLKSRLEWGEPAFTILDVRDRSTYNDGHIMGAMAMPIE-----------DLVDRASSSLEKSRDIYVYGAGDEQTS 70 (141)
T ss_dssp CCHHHHHHHHHHSCSCEEEEECSCHHHHHHCEETTCEECCGG-----------GHHHHHHTTSCTTSEEEEECSSHHHHH
T ss_pred CCHHHHHHHHhcCCCCEEEEECCCHHHHhCCCCCCCEEcCHH-----------HHHHHHHhcCCCCCeEEEEECCChHHH
Confidence 788999988863 389999999999999999999999994 333444466889999999999999999
Q ss_pred HHHHHHH-cCCCCeeEccccHHHhhhCCCCCC
Q 030104 152 MAATDLL-NGFAGITDIAGGFAAWRQNGLPTE 182 (183)
Q Consensus 152 ~a~~~L~-~G~~~v~~l~GG~~~W~~~g~pv~ 182 (183)
.+++.|+ .||++|++|+||+.+|.++|+|++
T Consensus 71 ~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 102 (141)
T 3ilm_A 71 QAVNLLRSAGFEHVSELKGGLAAWKAIGGPTE 102 (141)
T ss_dssp HHHHHHHHTTCCSEEECTTHHHHHHHTTCCEE
T ss_pred HHHHHHHHcCCCCEEEecCHHHHHHHCCCCcc
Confidence 9999999 999999999999999999999975
No 10
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=99.93 E-value=1.6e-25 Score=162.48 Aligned_cols=102 Identities=27% Similarity=0.451 Sum_probs=87.6
Q ss_pred CCCcccCHHHHHHHHh--C-CCEEEEcCChhhHhc-cCCCCceecCcccccCCCCCCCHHHHHHHH--------hcCCCC
Q 030104 70 GVPTSVPVRVAHELLQ--A-GHRYLDVRTPEEFSA-GHATGAINVPYMYRVGSGMTKNLKFVEEVS--------TRFRKH 137 (183)
Q Consensus 70 ~~~~~i~~~~~~~~~~--~-~~~lIDvR~~~e~~~-ghIpgAvnip~~~~~~~~~~~~~~~~~~~~--------~~l~~~ 137 (183)
.....|+++++.++++ + +++|||||++.||.. ||||||+|||+.. +.... ..++++
T Consensus 19 ~~~~~is~~~l~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA~~ip~~~------------l~~~~~~~~~~~~~~~~~~ 86 (139)
T 2hhg_A 19 SSIETLTTADAIALHKSGASDVVIVDIRDPREIERDGKIPGSFSCTRGM------------LEFWIDPQSPYAKPIFQED 86 (139)
T ss_dssp TTSEEECHHHHHHHHHTTCTTEEEEECSCHHHHHHHCCCTTCEECCGGG------------HHHHHCTTSTTCCGGGGSS
T ss_pred HhcCccCHHHHHHHHhccCCCeEEEECCCHHHHHhCCCCCCeEECChHH------------HHHhcCccchhhhccCCCC
Confidence 4557899999999887 3 489999999999998 9999999999852 22211 235788
Q ss_pred CeEEEEcCCchHHHHHHHHHH-cCCCCeeEccccHHHhhhCCCCCCC
Q 030104 138 DEIIVGCQSGKRSMMAATDLL-NGFAGITDIAGGFAAWRQNGLPTEP 183 (183)
Q Consensus 138 ~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~GG~~~W~~~g~pv~~ 183 (183)
++|||||.+|.||..+++.|+ .||++|++|+||+.+|.++|+|+++
T Consensus 87 ~~ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 133 (139)
T 2hhg_A 87 KKFVFYCAGGLRSALAAKTAQDMGLKPVAHIEGGFGAWRDAGGPIEA 133 (139)
T ss_dssp SEEEEECSSSHHHHHHHHHHHHHTCCSEEEETTHHHHHHHTTCCCC-
T ss_pred CeEEEECCCChHHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCCeec
Confidence 999999999999999999999 9999999999999999999999863
No 11
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=99.93 E-value=1.1e-25 Score=163.47 Aligned_cols=103 Identities=24% Similarity=0.387 Sum_probs=89.0
Q ss_pred CCCcccCHHHHHHHHh-C-CCEEEEcCChhhHhc-cC--CCCceecCcccccCCCCCCCHHHHHHHHhcCCCCCeEEEEc
Q 030104 70 GVPTSVPVRVAHELLQ-A-GHRYLDVRTPEEFSA-GH--ATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGC 144 (183)
Q Consensus 70 ~~~~~i~~~~~~~~~~-~-~~~lIDvR~~~e~~~-gh--IpgAvnip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c 144 (183)
.....|+++++.++++ + +++|||||++.||.. || ||||+|||+..+. + ......++++++|||||
T Consensus 20 ~~~~~is~~el~~~l~~~~~~~liDVR~~~E~~~~gh~~IpgAinip~~~l~--------~--~~~~~~l~~~~~ivvyC 89 (137)
T 1qxn_A 20 ADMVMLSPKDAYKLLQENPDITLIDVRDPDELKAMGKPDVKNYKHMSRGKLE--------P--LLAKSGLDPEKPVVVFC 89 (137)
T ss_dssp HSSEEECHHHHHHHHHHCTTSEEEECCCHHHHHHTCEECCSSEEECCTTTSH--------H--HHHHHCCCTTSCEEEEC
T ss_pred ccCcccCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCcCCCCCEEcchHHhh--------h--HHhhccCCCCCeEEEEc
Confidence 3456799999999887 4 499999999999999 99 9999999985211 1 11345678899999999
Q ss_pred CCchHHHHHHHHHH-cCCCCeeEccccHHHhhhCCCCCC
Q 030104 145 QSGKRSMMAATDLL-NGFAGITDIAGGFAAWRQNGLPTE 182 (183)
Q Consensus 145 ~~g~~s~~a~~~L~-~G~~~v~~l~GG~~~W~~~g~pv~ 182 (183)
.+|.||..+++.|+ .||++|++|+||+.+|.++|+|++
T Consensus 90 ~~G~rS~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 128 (137)
T 1qxn_A 90 KTAARAALAGKTLREYGFKTIYNSEGGMDKWLEEGLPSL 128 (137)
T ss_dssp CSSSCHHHHHHHHHHHTCSCEEEESSCHHHHHHTTCCEE
T ss_pred CCCcHHHHHHHHHHHcCCcceEEEcCcHHHHHHCCCCcc
Confidence 99999999999999 999999999999999999999976
No 12
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=99.92 E-value=2.2e-25 Score=159.20 Aligned_cols=98 Identities=23% Similarity=0.279 Sum_probs=88.2
Q ss_pred cccCHHHHHHHHhC---CCEEEEcCChhhH-hccCCCCceecCcccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCch
Q 030104 73 TSVPVRVAHELLQA---GHRYLDVRTPEEF-SAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGK 148 (183)
Q Consensus 73 ~~i~~~~~~~~~~~---~~~lIDvR~~~e~-~~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~ 148 (183)
..|+++++.+++++ +++|||||++.|| ..||||||+|||+ ..+......++++++|||||.+|.
T Consensus 15 ~~is~~el~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA~nip~------------~~l~~~~~~l~~~~~ivvyC~~g~ 82 (124)
T 3flh_A 15 LYIDHHTVLADMQNATGKYVVLDVRNAPAQVKKDQIKGAIAMPA------------KDLATRIGELDPAKTYVVYDWTGG 82 (124)
T ss_dssp TEECHHHHHHHHHHTCCCEEEEECCCSCHHHHCCEETTCEECCH------------HHHHHHGGGSCTTSEEEEECSSSS
T ss_pred ceecHHHHHHHHHcCCCCEEEEECCCHHHHHhcCcCCCCEECCH------------HHHHHHHhcCCCCCeEEEEeCCCC
Confidence 46899999888764 2899999999998 9999999999999 566777778899999999999999
Q ss_pred H--HHHHHHHHH-cCCCCeeEccccHHHhhhCCCCCCC
Q 030104 149 R--SMMAATDLL-NGFAGITDIAGGFAAWRQNGLPTEP 183 (183)
Q Consensus 149 ~--s~~a~~~L~-~G~~~v~~l~GG~~~W~~~g~pv~~ 183 (183)
+ |..+++.|+ .||+ |++|+||+.+|.++|+|+++
T Consensus 83 r~~s~~a~~~L~~~G~~-v~~l~GG~~~W~~~~~p~~~ 119 (124)
T 3flh_A 83 TTLGKTALLVLLSAGFE-AYELAGALEGWKGMQLPLEH 119 (124)
T ss_dssp CSHHHHHHHHHHHHTCE-EEEETTHHHHHHHTTCCEEC
T ss_pred chHHHHHHHHHHHcCCe-EEEeCCcHHHHHHcCCCCCc
Confidence 8 899999999 9996 99999999999999999864
No 13
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=99.92 E-value=5.3e-26 Score=154.82 Aligned_cols=92 Identities=24% Similarity=0.307 Sum_probs=76.2
Q ss_pred cccCHHHHHHHHhCCCEEEEcCChhhHhccCCCCceecCcccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCchHHHH
Q 030104 73 TSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMM 152 (183)
Q Consensus 73 ~~i~~~~~~~~~~~~~~lIDvR~~~e~~~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~~s~~ 152 (183)
..|+++++.++++++++|||||++.||..||||||+|+|+. .+......+++ ++||+||.+|.||..
T Consensus 2 ~~is~~~l~~~~~~~~~liDvR~~~e~~~ghi~gAi~ip~~------------~l~~~~~~l~~-~~ivvyC~~g~rs~~ 68 (94)
T 1wv9_A 2 RKVRPEELPALLEEGVLVVDVRPADRRSTPLPFAAEWVPLE------------KIQKGEHGLPR-RPLLLVCEKGLLSQV 68 (94)
T ss_dssp CEECGGGHHHHHHTTCEEEECCCC--CCSCCSSCCEECCHH------------HHTTTCCCCCS-SCEEEECSSSHHHHH
T ss_pred CcCCHHHHHHHHHCCCEEEECCCHHHHhcccCCCCEECCHH------------HHHHHHHhCCC-CCEEEEcCCCChHHH
Confidence 35788888888877899999999999999999999999983 33444455778 999999999999999
Q ss_pred HHHHHH-cCCCCeeEccccHHHhhhCC
Q 030104 153 AATDLL-NGFAGITDIAGGFAAWRQNG 178 (183)
Q Consensus 153 a~~~L~-~G~~~v~~l~GG~~~W~~~g 178 (183)
+++.|+ .||+ |++|+||+.+|.++|
T Consensus 69 a~~~L~~~G~~-v~~l~GG~~~W~~~G 94 (94)
T 1wv9_A 69 AALYLEAEGYE-AMSLEGGLQALTQGK 94 (94)
T ss_dssp HHHHHHHHTCC-EEEETTGGGCC----
T ss_pred HHHHHHHcCCc-EEEEcccHHHHHhCc
Confidence 999999 9998 999999999998765
No 14
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=99.91 E-value=4.8e-25 Score=161.49 Aligned_cols=99 Identities=24% Similarity=0.362 Sum_probs=85.5
Q ss_pred cccCHHHHHHHHhCC---CEEEEcCChhhHhccCCCCceecCcccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCc--
Q 030104 73 TSVPVRVAHELLQAG---HRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSG-- 147 (183)
Q Consensus 73 ~~i~~~~~~~~~~~~---~~lIDvR~~~e~~~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g-- 147 (183)
..|+++++.++++++ ++|||||++.||..||||||+|||+..+. ......++++++|||||.+|
T Consensus 16 ~~is~~el~~~l~~~~~~~~liDvR~~~ey~~ghIpgAinip~~~l~-----------~~~~~~l~~~~~ivvyC~~g~~ 84 (144)
T 3nhv_A 16 YETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKIN-----------EDTTKRLSKEKVIITYCWGPAC 84 (144)
T ss_dssp TEEEHHHHHHHHHTTCCSEEEEECSCHHHHHHCBCTTCEECCGGGCS-----------TTTTTTCCTTSEEEEECSCTTC
T ss_pred cccCHHHHHHHHHcCCCCEEEEECcCHHHHhcCCCCCCEECCHHHHh-----------HHHHhhCCCCCeEEEEECCCCc
Confidence 457999999888754 89999999999999999999999995322 12334578899999999999
Q ss_pred hHHHHHHHHHH-cCCCCeeEccccHHHhhhCCCCCCC
Q 030104 148 KRSMMAATDLL-NGFAGITDIAGGFAAWRQNGLPTEP 183 (183)
Q Consensus 148 ~~s~~a~~~L~-~G~~~v~~l~GG~~~W~~~g~pv~~ 183 (183)
.+|..+++.|+ .|| +|++|+||+.+|.++|+|+++
T Consensus 85 ~rs~~aa~~L~~~G~-~v~~l~GG~~~W~~~g~pv~~ 120 (144)
T 3nhv_A 85 NGATKAAAKFAQLGF-RVKELIGGIEYWRKENGEVEG 120 (144)
T ss_dssp CHHHHHHHHHHHTTC-EEEEEESHHHHHHHTTCCCBS
T ss_pred cHHHHHHHHHHHCCC-eEEEeCCcHHHHHHCCCCccC
Confidence 69999999999 999 699999999999999999863
No 15
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=99.90 E-value=2e-24 Score=151.12 Aligned_cols=86 Identities=19% Similarity=0.313 Sum_probs=75.4
Q ss_pred hCCCEEEEcCChhhHhccCCCCceecCcccccCCCCCCCHHHHHHHHh--cCCCCCeEEEEcCCchHHHHHHHHHH-cCC
Q 030104 85 QAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVST--RFRKHDEIIVGCQSGKRSMMAATDLL-NGF 161 (183)
Q Consensus 85 ~~~~~lIDvR~~~e~~~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~--~l~~~~~ivv~c~~g~~s~~a~~~L~-~G~ 161 (183)
+++++|||||++.||..||||||+|+|+. .+..... .++++++|||||.+|.||..+++.|+ .||
T Consensus 14 ~~~~~liDvR~~~e~~~ghIpgAi~ip~~------------~l~~~~~~~~~~~~~~ivvyC~~G~rs~~aa~~L~~~G~ 81 (110)
T 2k0z_A 14 FNDFIVVDVRELDEYEELHLPNATLISVN------------DQEKLADFLSQHKDKKVLLHCRAGRRALDAAKSMHELGY 81 (110)
T ss_dssp GGGSEEEEEECHHHHHHSBCTTEEEEETT------------CHHHHHHHHHSCSSSCEEEECSSSHHHHHHHHHHHHTTC
T ss_pred cCCeEEEECCCHHHHhcCcCCCCEEcCHH------------HHHHHHHhcccCCCCEEEEEeCCCchHHHHHHHHHHCCC
Confidence 34589999999999999999999999994 2222332 37889999999999999999999999 999
Q ss_pred CCeeEccccHHHhhhCCCCCCC
Q 030104 162 AGITDIAGGFAAWRQNGLPTEP 183 (183)
Q Consensus 162 ~~v~~l~GG~~~W~~~g~pv~~ 183 (183)
++ ++|+||+.+|.++|+|+++
T Consensus 82 ~~-~~l~GG~~~W~~~g~p~~~ 102 (110)
T 2k0z_A 82 TP-YYLEGNVYDFEKYGFRMVY 102 (110)
T ss_dssp CC-EEEESCGGGTTTTTCCCBC
T ss_pred CE-EEecCCHHHHHHCCCcEec
Confidence 99 9999999999999999863
No 16
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.90 E-value=2.8e-23 Score=166.13 Aligned_cols=137 Identities=17% Similarity=0.286 Sum_probs=105.0
Q ss_pred eEEccCCccccccccccCCccc----------cCCCCcccCHHHHHHHHhCC-CEEEEcCChhhHh--------ccCCCC
Q 030104 46 IGFISSKILSFCPKASLRGNLE----------AVGVPTSVPVRVAHELLQAG-HRYLDVRTPEEFS--------AGHATG 106 (183)
Q Consensus 46 ~~~l~~~~~~~~~~~~~~~~~~----------~~~~~~~i~~~~~~~~~~~~-~~lIDvR~~~e~~--------~ghIpg 106 (183)
+..+.+++.+|........... .......++++++.++++++ ++|||||++.||. .|||||
T Consensus 110 v~~L~GG~~~w~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~~liDvR~~~e~~g~~~~~~~~ghIpg 189 (271)
T 1e0c_A 110 YHYLNGGLTAWLAEDRPLSRELPAPAGGPVALSLHDEPTASRDYLLGRLGAADLAIWDARSPQEYRGEKVLAAKGGHIPG 189 (271)
T ss_dssp EEEETTHHHHHHHTTCCCBCCCCCCCCSCCCCCCCSTTBCCHHHHHHHTTCTTEEEEECSCHHHHTTSSCCSSSCSBCTT
T ss_pred eEEecCCHHHHHHcCCCccCCCCCCCCCCccccCCccccccHHHHHHHhcCCCcEEEEcCChhhcCCccCCCCcCCcCCC
Confidence 3478899999965321111000 01122457899999888654 8999999999999 999999
Q ss_pred ceecCcccccCC--CCCCCHHHHHHHHh--cCCCCCeEEEEcCCchHHHHHHHHHH-cCCCCeeEccccHHHhhhC-CCC
Q 030104 107 AINVPYMYRVGS--GMTKNLKFVEEVST--RFRKHDEIIVGCQSGKRSMMAATDLL-NGFAGITDIAGGFAAWRQN-GLP 180 (183)
Q Consensus 107 Avnip~~~~~~~--~~~~~~~~~~~~~~--~l~~~~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~GG~~~W~~~-g~p 180 (183)
|+|+|+..+... .+... +.++..+. .++++++|||||.+|.||..+++.|+ .||++|++|+||+.+|.++ |+|
T Consensus 190 A~~ip~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~~p 268 (271)
T 1e0c_A 190 AVNFEWTAAMDPSRALRIR-TDIAGRLEELGITPDKEIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTP 268 (271)
T ss_dssp CEECCGGGGEEGGGTTEEC-TTHHHHHHHTTCCTTSEEEEECSSSSHHHHHHHHHHHTTCSCEEECSSHHHHHTTCTTCC
T ss_pred ceeccHHHhCCCCCCCCCH-HHHHHHHHHcCCCCCCCEEEECCchHHHHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCC
Confidence 999999765422 22222 44555555 57889999999999999999999999 9999999999999999998 999
Q ss_pred CCC
Q 030104 181 TEP 183 (183)
Q Consensus 181 v~~ 183 (183)
+++
T Consensus 269 v~~ 271 (271)
T 1e0c_A 269 VEL 271 (271)
T ss_dssp CBC
T ss_pred CcC
Confidence 874
No 17
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=99.89 E-value=1.7e-23 Score=153.59 Aligned_cols=108 Identities=27% Similarity=0.411 Sum_probs=84.6
Q ss_pred CcccCHHHHHHHHh--CCCEEEEcCChhhHhc-cCC------CCceecCcccccCCCCCCCHHHHHHHHhc-----CCCC
Q 030104 72 PTSVPVRVAHELLQ--AGHRYLDVRTPEEFSA-GHA------TGAINVPYMYRVGSGMTKNLKFVEEVSTR-----FRKH 137 (183)
Q Consensus 72 ~~~i~~~~~~~~~~--~~~~lIDvR~~~e~~~-ghI------pgAvnip~~~~~~~~~~~~~~~~~~~~~~-----l~~~ 137 (183)
...|+++++.++++ .+++|||||++.||.. ||| |||+|||+.. ..... ...+...+... ++++
T Consensus 4 ~~~is~~el~~~l~~~~~~~liDVR~~~e~~~~ghi~~~g~~pgAv~ip~~~-~~~~~--~~~~~~~l~~~l~~~~~~~~ 80 (148)
T 2fsx_A 4 AGDITPLQAWEMLSDNPRAVLVDVRCEAEWRFVGVPDLSSLGREVVYVEWAT-SDGTH--NDNFLAELRDRIPADADQHE 80 (148)
T ss_dssp SEEECHHHHHHHHHHCTTCEEEECSCHHHHHHTCEECCGGGTCCCEECCSBC-TTSCB--CTTHHHHHHHHCC-------
T ss_pred cccCCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCCccccCCCCcEEeeeec-ccccc--CHHHHHHHHHHHhhccCCCC
Confidence 45789999998886 3599999999999997 999 9999999964 21111 12233333322 4788
Q ss_pred CeEEEEcCCchHHHHHHHHHH-cCCCCeeEccccH------------HHhhhCCCCCC
Q 030104 138 DEIIVGCQSGKRSMMAATDLL-NGFAGITDIAGGF------------AAWRQNGLPTE 182 (183)
Q Consensus 138 ~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~GG~------------~~W~~~g~pv~ 182 (183)
++|||||++|.||..+++.|+ .||++|++|+||+ .+|.++|+|++
T Consensus 81 ~~ivvyC~~G~rS~~aa~~L~~~G~~~v~~l~GG~~~w~~~~g~~~~~~W~~~glp~~ 138 (148)
T 2fsx_A 81 RPVIFLCRSGNRSIGAAEVATEAGITPAYNVLDGFEGHLDAEGHRGATGWRAVGLPWR 138 (148)
T ss_dssp CCEEEECSSSSTHHHHHHHHHHTTCCSEEEETTTTTCCCCTTSCCCSSSTTTTTCSEE
T ss_pred CEEEEEcCCChhHHHHHHHHHHcCCcceEEEcCChhhhhhhccccccccHHHcCCCCC
Confidence 999999999999999999999 9999999999999 68888999875
No 18
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.89 E-value=2.6e-23 Score=167.06 Aligned_cols=138 Identities=22% Similarity=0.330 Sum_probs=100.4
Q ss_pred eEEccCCccccccccccCCccc----------cCCCCcccCHHHHHHHHh-CCCEEEEcCChhhH-----------hccC
Q 030104 46 IGFISSKILSFCPKASLRGNLE----------AVGVPTSVPVRVAHELLQ-AGHRYLDVRTPEEF-----------SAGH 103 (183)
Q Consensus 46 ~~~l~~~~~~~~~~~~~~~~~~----------~~~~~~~i~~~~~~~~~~-~~~~lIDvR~~~e~-----------~~gh 103 (183)
+..+.+++.+|.........-. .......|+++++.++++ .+++|||||++.|| ..||
T Consensus 115 v~~l~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~e~~~~~~~~~~~liDvR~~~e~~G~~~~~~~~~~~gh 194 (280)
T 1urh_A 115 VSILGGGLAGWQRDDLLLEEGAVELPEGEFNAAFNPEAVVKVTDVLLASHENTAQIIDARPAARFNAEVDEPRPGLRRGH 194 (280)
T ss_dssp EEEETTHHHHHHHTTCCCBBSCCCCCCCCCCCCCCGGGBCCHHHHHHHHHHTCSEEEECSCHHHHSSCCCC----CCSSS
T ss_pred EEEecCCHHHHHHCCCcccCCCCCCCCCccccccCcccEEcHHHHHHHhcCCCcEEEeCCchhhcccccCCCCCCCcCcc
Confidence 4678899999975321111000 011123589999988876 45999999999999 6899
Q ss_pred CCCceecCcccccCCCCCCCHHHHHHHHh--cCCCCCeEEEEcCCchHHHHHHHHHH-cCCCCeeEccccHHHhhh-CCC
Q 030104 104 ATGAINVPYMYRVGSGMTKNLKFVEEVST--RFRKHDEIIVGCQSGKRSMMAATDLL-NGFAGITDIAGGFAAWRQ-NGL 179 (183)
Q Consensus 104 IpgAvnip~~~~~~~~~~~~~~~~~~~~~--~l~~~~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~GG~~~W~~-~g~ 179 (183)
||||+|||+..+...+...+.+.+...+. .++++++|||||.+|.||..++..|. .||++|++|+||+.+|.+ .++
T Consensus 195 IpgA~nip~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ivv~C~~G~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~ 274 (280)
T 1urh_A 195 IPGALNVPWTELVREGELKTTDELDAIFFGRGVSYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADL 274 (280)
T ss_dssp CTTCEECCGGGGBSSSSBCCHHHHHHHHHTTTCCSSSCEEEECCSSSTHHHHHHHHHHTTCSSCEEECCSCCC-------
T ss_pred CCCceEeeHHHhhcCCccCCHHHHHHHHHHcCCCCCCCEEEECChHHHHHHHHHHHHHcCCCCceeeCChHHHHhcCCCC
Confidence 99999999987665455566677777666 46889999999999999999999999 999999999999999987 499
Q ss_pred CCCC
Q 030104 180 PTEP 183 (183)
Q Consensus 180 pv~~ 183 (183)
|+++
T Consensus 275 Pv~~ 278 (280)
T 1urh_A 275 PVEP 278 (280)
T ss_dssp ----
T ss_pred Ccee
Confidence 9864
No 19
>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1
Probab=99.89 E-value=4.5e-24 Score=157.62 Aligned_cols=106 Identities=19% Similarity=0.261 Sum_probs=86.8
Q ss_pred CCCcccCHHHHHHHHhC-CCEEEEcCChhhHhccCCCCceecCcccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcC-Cc
Q 030104 70 GVPTSVPVRVAHELLQA-GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQ-SG 147 (183)
Q Consensus 70 ~~~~~i~~~~~~~~~~~-~~~lIDvR~~~e~~~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~-~g 147 (183)
.....|+++++.+++++ +++|||||++.||..||||||+|||+..+. +.+.++...++++++|||||+ +|
T Consensus 25 ~~~~~Is~~el~~~l~~~~~~lIDvR~~~ey~~ghIpgAinip~~~l~--------~~~~~l~~~~~~~~~iVvyC~~~G 96 (152)
T 1t3k_A 25 RSISYITSTQLLPLHRRPNIAIIDVRDEERNYDGHIAGSLHYASGSFD--------DKISHLVQNVKDKDTLVFHSALSQ 96 (152)
T ss_dssp SSSEEECTTTTTTCCCCTTEEEEEESCSHHHHSSCCCSSEEECCSSSS--------TTHHHHHHTCCSCCEEEESSSCCS
T ss_pred CCCceECHHHHHHHhcCCCEEEEECCChhhccCccCCCCEECCHHHHH--------HHHHHHHHhcCCCCEEEEEcCCCC
Confidence 34567788888777653 589999999999999999999999995321 234555555678899999999 99
Q ss_pred hHHHHHHHHH--------H-cCCCCeeEccccHHHhhhCCCCCCC
Q 030104 148 KRSMMAATDL--------L-NGFAGITDIAGGFAAWRQNGLPTEP 183 (183)
Q Consensus 148 ~~s~~a~~~L--------~-~G~~~v~~l~GG~~~W~~~g~pv~~ 183 (183)
.++..++..| + .||++|++|+||+.+|.++|+|+++
T Consensus 97 ~rs~~aa~~L~~~l~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~ 141 (152)
T 1t3k_A 97 VRGPTCARRLVNYLDEKKEDTGIKNIMILERGFNGWEASGKPVCR 141 (152)
T ss_dssp SSHHHHHHHHHHHHHHSSSCCCSSEEEEESSTTHHHHHHSCSSCC
T ss_pred cchHHHHHHHHHHHHHHHHhcCCCcEEEEcCCHHHHHHcCCcccc
Confidence 9988777765 5 7999999999999999999999863
No 20
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.89 E-value=7e-23 Score=166.03 Aligned_cols=137 Identities=15% Similarity=0.243 Sum_probs=106.8
Q ss_pred eEEccCCccccccccccCCccc----------cCCCCcccCHHHHHHHHh-CCCEEEEcCChhhH------------hcc
Q 030104 46 IGFISSKILSFCPKASLRGNLE----------AVGVPTSVPVRVAHELLQ-AGHRYLDVRTPEEF------------SAG 102 (183)
Q Consensus 46 ~~~l~~~~~~~~~~~~~~~~~~----------~~~~~~~i~~~~~~~~~~-~~~~lIDvR~~~e~------------~~g 102 (183)
+..+.+++.+|........... .......++.+++.++++ .+++|||||++.|| ..|
T Consensus 123 V~~L~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~e~~~~~~~~~~~liDvR~~~e~~G~~~~~~~~~~~~g 202 (296)
T 1rhs_A 123 VSVLNGGFRNWLKEGHPVTSEPSRPEPAIFKATLNRSLLKTYEQVLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSG 202 (296)
T ss_dssp EEEETTHHHHHHHTTCCCBCSCCCCCCCCCCCCCCGGGEECHHHHHHHHHHCCSEEEECSCHHHHHTSSCCSSSSSCCCC
T ss_pred EEEcCCCHHHHHHcCCccccCCCCCCCCCcccCCCcceEEcHHHHHHHhcCCCceEEeCCchhhcccccCCcccCCCcCc
Confidence 4578899999975322111000 001124688999988775 45899999999999 789
Q ss_pred CCCCceecCcccccC-CCCCCCHHHHHHHHhc--CCCCCeEEEEcCCchHHHHHHHHHH-cCCCCeeEccccHHHhhh-C
Q 030104 103 HATGAINVPYMYRVG-SGMTKNLKFVEEVSTR--FRKHDEIIVGCQSGKRSMMAATDLL-NGFAGITDIAGGFAAWRQ-N 177 (183)
Q Consensus 103 hIpgAvnip~~~~~~-~~~~~~~~~~~~~~~~--l~~~~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~GG~~~W~~-~ 177 (183)
|||||+|||+.++.. .+...+.+.++..+.. ++++++|||||.+|.||..++..|. +||++|++|+|||.+|.. .
T Consensus 203 hIpgA~nip~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~ivv~C~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~ 282 (296)
T 1rhs_A 203 HIRGSVNMPFMNFLTEDGFEKSPEELRAMFEAKKVDLTKPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHRA 282 (296)
T ss_dssp EETTCEECCGGGGBCTTSCBCCHHHHHHHHHHTTCCTTSCEEEECSSSSTHHHHHHHHHHTTCCCCEEESSHHHHHHHHS
T ss_pred cCCCCEeecHHHhcCCCCcCCCHHHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCCCceeeCCcHHHHhcCC
Confidence 999999999976653 3445566677766653 6889999999999999999999999 999999999999999988 7
Q ss_pred CCCCC
Q 030104 178 GLPTE 182 (183)
Q Consensus 178 g~pv~ 182 (183)
++|++
T Consensus 283 ~~pv~ 287 (296)
T 1rhs_A 283 PPETW 287 (296)
T ss_dssp CGGGE
T ss_pred CCCcc
Confidence 88875
No 21
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=99.89 E-value=1.5e-23 Score=149.48 Aligned_cols=106 Identities=25% Similarity=0.271 Sum_probs=81.6
Q ss_pred ccCHHHHHHHHhCC--CEEEEcCChhhHhccCCCCceecCcccccCCCCCCCHHHHHHHH---h------cCCCCCeEEE
Q 030104 74 SVPVRVAHELLQAG--HRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVS---T------RFRKHDEIIV 142 (183)
Q Consensus 74 ~i~~~~~~~~~~~~--~~lIDvR~~~e~~~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~---~------~l~~~~~ivv 142 (183)
.|+++++.++++++ ++|||||++.||..||||||+|||+..+... ....+.... . .++++++|||
T Consensus 2 ~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~ivv 77 (127)
T 3i2v_A 2 RVSVTDYKRLLDSGAFHLLLDVRPQVEVDICRLPHALHIPLKHLERR----DAESLKLLKEAIWEEKQGTQEGAAVPIYV 77 (127)
T ss_dssp EECHHHHHHHHHHTCCCEEEECSCHHHHHHCCCTTSEECCHHHHHTT----CHHHHHHHHHHHHHHHTTC---CCEEEEE
T ss_pred CCCHHHHHHHHhCCCCeEEEECCCHHHhhheecCCceeCChHHHhhh----hhhhHHHHHHHHhhhcccccCCCCCeEEE
Confidence 57899999888643 8999999999999999999999999643211 111111111 1 1234559999
Q ss_pred EcCCchHHHHHHHHHH-c------CCCCeeEccccHHHhhhCCCCCCC
Q 030104 143 GCQSGKRSMMAATDLL-N------GFAGITDIAGGFAAWRQNGLPTEP 183 (183)
Q Consensus 143 ~c~~g~~s~~a~~~L~-~------G~~~v~~l~GG~~~W~~~g~pv~~ 183 (183)
||.+|.+|..+++.|. . ||.+|++|+||+.+|.++..|..|
T Consensus 78 ~C~~G~rs~~a~~~L~~~gg~~~~G~~~v~~l~GG~~~W~~~~~~~~p 125 (127)
T 3i2v_A 78 ICKLGNDSQKAVKILQSLSAAQELDPLTVRDVVGGLMAWAAKIDGTFP 125 (127)
T ss_dssp ECSSSSHHHHHHHHHHHHHHTTSSSCEEEEEETTHHHHHHHHTCTTSC
T ss_pred EcCCCCcHHHHHHHHHHhhccccCCCceEEEecCCHHHHHHhcCCCCC
Confidence 9999999999999999 8 688999999999999998777653
No 22
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.89 E-value=1.1e-22 Score=162.58 Aligned_cols=112 Identities=19% Similarity=0.171 Sum_probs=94.8
Q ss_pred CcccCHHHHHHHHhC-CCEEEEcCChhhHhccCCCCceecCcccccCC-----CCCCCHHHHHHHHhc--CCCCCeEEEE
Q 030104 72 PTSVPVRVAHELLQA-GHRYLDVRTPEEFSAGHATGAINVPYMYRVGS-----GMTKNLKFVEEVSTR--FRKHDEIIVG 143 (183)
Q Consensus 72 ~~~i~~~~~~~~~~~-~~~lIDvR~~~e~~~ghIpgAvnip~~~~~~~-----~~~~~~~~~~~~~~~--l~~~~~ivv~ 143 (183)
...|+++++.+++++ +++|||||++.||..||||||+|+|+..+... ++..+.+.+...+.. ++++++||||
T Consensus 8 ~~~is~~~l~~~l~~~~~~iiDvR~~~ey~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~vvvy 87 (271)
T 1e0c_A 8 PLVIEPADLQARLSAPELILVDLTSAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPREQLESLFGELGHRPEAVYVVY 87 (271)
T ss_dssp CSEECHHHHHTTTTCTTEEEEECSCHHHHHHCBSTTCEECCGGGGSCCCTTCTTSCCCHHHHHHHHHHHTCCTTCEEEEE
T ss_pred CceeeHHHHHHhccCCCeEEEEcCCcchhhhCcCCCCEECCHHHhccCCCCCCCCCCCHHHHHHHHHHcCCCCCCeEEEE
Confidence 457899999988854 58999999999999999999999999754322 344555666666555 6889999999
Q ss_pred cCCch-HHHHHHHHHH-cCCCCeeEccccHHHhhhCCCCCCC
Q 030104 144 CQSGK-RSMMAATDLL-NGFAGITDIAGGFAAWRQNGLPTEP 183 (183)
Q Consensus 144 c~~g~-~s~~a~~~L~-~G~~~v~~l~GG~~~W~~~g~pv~~ 183 (183)
|++|. +|.++++.|+ .||++|++|+||+.+|.++|+|+++
T Consensus 88 c~~g~~~s~~a~~~L~~~G~~~v~~L~GG~~~w~~~g~p~~~ 129 (271)
T 1e0c_A 88 DDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRPLSR 129 (271)
T ss_dssp CSSSSHHHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBC
T ss_pred cCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHcCCCccC
Confidence 99988 9999999999 9999999999999999999999863
No 23
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.89 E-value=9.2e-23 Score=166.01 Aligned_cols=137 Identities=15% Similarity=0.285 Sum_probs=108.1
Q ss_pred eEEccCCccccccccccCCcc----------ccCCCCcccCHHHHHHHHh-CCCEEEEcCChhhH-----------hccC
Q 030104 46 IGFISSKILSFCPKASLRGNL----------EAVGVPTSVPVRVAHELLQ-AGHRYLDVRTPEEF-----------SAGH 103 (183)
Q Consensus 46 ~~~l~~~~~~~~~~~~~~~~~----------~~~~~~~~i~~~~~~~~~~-~~~~lIDvR~~~e~-----------~~gh 103 (183)
+..+.+|+.+|.......... ........++.+++.++++ .+++|||||++.|| ..||
T Consensus 138 V~~L~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~e~~~~~~~~~~~liDvR~~~ef~G~~~~p~~~~~~Gh 217 (302)
T 3olh_A 138 VSLLDGGLRHWLRQNLPLSSGKSQPAPAEFRAQLDPAFIKTYEDIKENLESRRFQVVDSRATGRFRGTEPEPRDGIEPGH 217 (302)
T ss_dssp EEEETTHHHHHHHSCCC-CCSCCCCCCCCCCCCCCGGGEECHHHHHHHHHHCCSEEEECSCHHHHHTSSCCSSTTCCCCC
T ss_pred EEECCCCHHHHHHcCCCcccCCCCcCcCccccccCccceecHHHHHHhhcCCCcEEEecCCHHHccccccCCCcCCcCcc
Confidence 577899999997532211110 0011223578899988775 45899999999999 7899
Q ss_pred CCCceecCcccccC-CCCCCCHHHHHHHHh--cCCCCCeEEEEcCCchHHHHHHHHHH-cCCCCeeEccccHHHhhhCCC
Q 030104 104 ATGAINVPYMYRVG-SGMTKNLKFVEEVST--RFRKHDEIIVGCQSGKRSMMAATDLL-NGFAGITDIAGGFAAWRQNGL 179 (183)
Q Consensus 104 IpgAvnip~~~~~~-~~~~~~~~~~~~~~~--~l~~~~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~GG~~~W~~~g~ 179 (183)
||||+|||+..+.. .+...+.+.+++.+. .++++++||+||.+|.||..++..|. +||++|++|+|||.+|.++++
T Consensus 218 IpGAiniP~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~iv~yC~sG~rs~~a~~~L~~~G~~~v~~~~Gg~~~W~~~~~ 297 (302)
T 3olh_A 218 IPGTVNIPFTDFLSQEGLEKSPEEIRHLFQEKKVDLSKPLVATCGSGVTACHVALGAYLCGKPDVPIYDGSWVEWYMRAR 297 (302)
T ss_dssp CTTCEECCGGGGBCSSSCBCCHHHHHHHHHHTTCCTTSCEEEECSSSSTTHHHHHHHHTTTCCCCCEESSHHHHHHHHHC
T ss_pred CCCceecCHHHhcCCCCccCCHHHHHHHHHhcCCCCCCCEEEECCChHHHHHHHHHHHHcCCCCeeEeCCcHHHHhhccC
Confidence 99999999987653 345667777777776 37888999999999999999999999 999999999999999999998
Q ss_pred CCC
Q 030104 180 PTE 182 (183)
Q Consensus 180 pv~ 182 (183)
|..
T Consensus 298 P~~ 300 (302)
T 3olh_A 298 PED 300 (302)
T ss_dssp CCC
T ss_pred CCC
Confidence 864
No 24
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=99.88 E-value=4.1e-23 Score=148.24 Aligned_cols=103 Identities=25% Similarity=0.398 Sum_probs=78.1
Q ss_pred CcccCHHHHHHHHhCCCEEEEcCChhhHhccCCCCceecCcccccCC----------C-----------CCCCHHHHHHH
Q 030104 72 PTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGS----------G-----------MTKNLKFVEEV 130 (183)
Q Consensus 72 ~~~i~~~~~~~~~~~~~~lIDvR~~~e~~~ghIpgAvnip~~~~~~~----------~-----------~~~~~~~~~~~ 130 (183)
...|+++++.+ +++++|||||++.||..||||||+|||+...... + .......+...
T Consensus 4 ~~~i~~~el~~--~~~~~iiDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (134)
T 3g5j_A 4 MSVIKIEKALK--LDKVIFVDVRTEGEYEEDHILNAINMPLFKNNEHNEVGTIYKMQGKHEAIQKGFDYVSYKLKDIYLQ 81 (134)
T ss_dssp -CEECHHHHTT--CTTEEEEECSCHHHHHHCCCTTCEECCSSCHHHHHHHHHHHHHHCHHHHHHHHHHHHGGGHHHHHHH
T ss_pred ccccCHHHHHh--cCCcEEEEcCCHHHHhcCCCCCCEEcCccchhhhhcccceeeecChhHHHhcccccccccHHHHHHH
Confidence 35678888766 5569999999999999999999999999521100 0 00000123333
Q ss_pred HhcCCCC-CeEEEEc-CCchHHHHHHHHHH-cCCCCeeEccccHHHhhhC
Q 030104 131 STRFRKH-DEIIVGC-QSGKRSMMAATDLL-NGFAGITDIAGGFAAWRQN 177 (183)
Q Consensus 131 ~~~l~~~-~~ivv~c-~~g~~s~~a~~~L~-~G~~~v~~l~GG~~~W~~~ 177 (183)
...++++ ++||||| .+|.||..+++.|+ .|| +|++|+||+.+|.+.
T Consensus 82 ~~~~~~~~~~ivvyC~~~G~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~ 130 (134)
T 3g5j_A 82 AAELALNYDNIVIYCARGGMRSGSIVNLLSSLGV-NVYQLEGGYKAYRNF 130 (134)
T ss_dssp HHHHHTTCSEEEEECSSSSHHHHHHHHHHHHTTC-CCEEETTHHHHHHHH
T ss_pred HHHhccCCCeEEEEECCCChHHHHHHHHHHHcCC-ceEEEeCcHHHHHHH
Confidence 3446677 9999999 59999999999999 999 999999999999874
No 25
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.88 E-value=2.8e-22 Score=161.33 Aligned_cols=138 Identities=20% Similarity=0.341 Sum_probs=107.4
Q ss_pred eEEccCCccccccccccCCc-c-c---------cCCCCcccCHHHHHHHHh----CCCEEEEcCChhhHh----------
Q 030104 46 IGFISSKILSFCPKASLRGN-L-E---------AVGVPTSVPVRVAHELLQ----AGHRYLDVRTPEEFS---------- 100 (183)
Q Consensus 46 ~~~l~~~~~~~~~~~~~~~~-~-~---------~~~~~~~i~~~~~~~~~~----~~~~lIDvR~~~e~~---------- 100 (183)
+..+.+++.+|......... . . .......|+++++.++++ ++..|||||++.||.
T Consensus 108 v~~l~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~~i~~~el~~~l~~~~~~~~~liDvR~~~e~~g~~~~~~~~~ 187 (285)
T 1uar_A 108 VRLMNGGRQKWVEEGRPLTTEVPSYPPGRYEVPYRDESIRAYRDDVLEHIIKVKEGKGALVDVRSPQEYRGELTHMPDYP 187 (285)
T ss_dssp EEEETTHHHHHHHHTCCCBCCCCCCCCCCCCCCCCCGGGEECHHHHHHHHHHHHTTSEEEEECSCHHHHHTCC-------
T ss_pred eEEecCCHHHHHHCCCcccCCCCcccCCCcccccCCcceEEcHHHHHHHHhhcccCCCcEEEcCCccceeeecccccccc
Confidence 45788899999642211110 0 0 011123589999998884 456899999999998
Q ss_pred ------ccCCCCceecCcccccC-CCCCCCHHHHHHHHhc--CCCCCeEEEEcCCchHHHHHHHHHH--cCCCCeeEccc
Q 030104 101 ------AGHATGAINVPYMYRVG-SGMTKNLKFVEEVSTR--FRKHDEIIVGCQSGKRSMMAATDLL--NGFAGITDIAG 169 (183)
Q Consensus 101 ------~ghIpgAvnip~~~~~~-~~~~~~~~~~~~~~~~--l~~~~~ivv~c~~g~~s~~a~~~L~--~G~~~v~~l~G 169 (183)
.||||||+|+|+..+.. .+...+.+.++..+.. ++++++|||||++|.||..+++.|+ .||++|++|+|
T Consensus 188 ~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ivvyC~~G~rs~~a~~~L~~~~G~~~v~~l~G 267 (285)
T 1uar_A 188 QEGALRAGHIPGAKNIPWAKAVNPDGTFKSAEELRALYEPLGITKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDG 267 (285)
T ss_dssp -CCCSCCSBCTTCEECCGGGGBCTTSCBCCHHHHHHHHGGGTCCTTSEEEEECSSHHHHHHHHHHHHTTSCCSCEEEESS
T ss_pred ccccccCCcCCCccccCHHHhcCCCCcCCCHHHHHHHHHHcCCCCCCCEEEECCchHHHHHHHHHHHHHcCCCCcceeCc
Confidence 89999999999976552 3455677778887776 7889999999999999999999997 89999999999
Q ss_pred cHHHhh-hCCCCCCC
Q 030104 170 GFAAWR-QNGLPTEP 183 (183)
Q Consensus 170 G~~~W~-~~g~pv~~ 183 (183)
|+.+|. ..|+|+++
T Consensus 268 G~~~W~~~~g~pv~~ 282 (285)
T 1uar_A 268 SWTEWGNLVGVPIAK 282 (285)
T ss_dssp HHHHHTTSTTCCCBC
T ss_pred hHHHHhcCCCCCccc
Confidence 999998 78999864
No 26
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.88 E-value=2.6e-22 Score=164.46 Aligned_cols=137 Identities=20% Similarity=0.317 Sum_probs=109.2
Q ss_pred eEEccCCccccccccccCCc-cc--------c---CCCCcccCHHHHHHHHhCCCEEEEcCChhhHhc------------
Q 030104 46 IGFISSKILSFCPKASLRGN-LE--------A---VGVPTSVPVRVAHELLQAGHRYLDVRTPEEFSA------------ 101 (183)
Q Consensus 46 ~~~l~~~~~~~~~~~~~~~~-~~--------~---~~~~~~i~~~~~~~~~~~~~~lIDvR~~~e~~~------------ 101 (183)
+..+.+++..|......... .. . ......++.+++.++++++ +|||||++.||..
T Consensus 140 V~~L~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~i~~~el~~~l~~~-~liDvR~~~e~~~~~~~~~~~~~~~ 218 (318)
T 3hzu_A 140 VRLLNGGRDLWLAERRETTLDVPTKTCTGYPVVQRNDAPIRAFRDDVLAILGAQ-PLIDVRSPEEYTGKRTHMPDYPEEG 218 (318)
T ss_dssp EEEETTHHHHHHHTTCCCBCCCCCCCCCCCCCCCCCCTTTBCCHHHHHHHTTTS-CEEECSCHHHHHTSCSSCTTSCSCS
T ss_pred eEEccCCHHHHhhcCCCcccCCCCCCCCccccccCCCccccccHHHHHHhhcCC-eEEecCCHHHhcccccCcccccccc
Confidence 46788999999753221111 00 0 1122357899999988777 9999999999998
Q ss_pred ----cCCCCceecCccccc-CCCCCCCHHHHHHHHhcCCCCCeEEEEcCCchHHHHHHHHHH--cCCCCeeEccccHHHh
Q 030104 102 ----GHATGAINVPYMYRV-GSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLL--NGFAGITDIAGGFAAW 174 (183)
Q Consensus 102 ----ghIpgAvnip~~~~~-~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~~s~~a~~~L~--~G~~~v~~l~GG~~~W 174 (183)
||||||+|||+..++ .++.+.+.+.++..+..++++++||+||++|.||..++..|. .||++|++|+|||.+|
T Consensus 219 ~~~~GhIpGA~niP~~~~~~~~g~~~~~~~l~~~~~~l~~~~~ivvyC~sG~rs~~a~~~L~~~~G~~~v~~~~GG~~~W 298 (318)
T 3hzu_A 219 ALRAGHIPTAVHIPWGKAADESGRFRSREELERLYDFINPDDQTVVYCRIGERSSHTWFVLTHLLGKADVRNYDGSWTEW 298 (318)
T ss_dssp CSSCSBCTTCEECCGGGGBCTTSCBCCHHHHHHHTTTCCTTCCCEEECSSSHHHHHHHHHHHHTSCCSSCEECTTHHHHH
T ss_pred CCcCcCCCCeeecCHHHhcCCCCcCCCHHHHHHHhcCCCCCCcEEEEcCChHHHHHHHHHHHHHcCCCCeeEeCCcHHHH
Confidence 999999999997655 345566777888888778999999999999999999999996 7999999999999999
Q ss_pred hh-CCCCCCC
Q 030104 175 RQ-NGLPTEP 183 (183)
Q Consensus 175 ~~-~g~pv~~ 183 (183)
.+ .|+|+++
T Consensus 299 ~~~~g~Pv~~ 308 (318)
T 3hzu_A 299 GNAVRVPIVA 308 (318)
T ss_dssp TTSTTCCCBC
T ss_pred hcCCCCCccc
Confidence 95 6999864
No 27
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.88 E-value=2e-22 Score=165.10 Aligned_cols=112 Identities=16% Similarity=0.198 Sum_probs=93.8
Q ss_pred CcccCHHHHHHHHhC-CCEEEEcCChhh-HhccCCCCceecCcccccC---CCCCCCHHHHHHHHhc--CCCCCeEEEEc
Q 030104 72 PTSVPVRVAHELLQA-GHRYLDVRTPEE-FSAGHATGAINVPYMYRVG---SGMTKNLKFVEEVSTR--FRKHDEIIVGC 144 (183)
Q Consensus 72 ~~~i~~~~~~~~~~~-~~~lIDvR~~~e-~~~ghIpgAvnip~~~~~~---~~~~~~~~~~~~~~~~--l~~~~~ivv~c 144 (183)
...|+++++++++++ +++|||||++.| |..||||||+|+|+...+. .....+.+.+...+.. ++++++|||||
T Consensus 39 ~~~is~~~l~~~l~~~~~~iiDvR~~~e~y~~gHIpGAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~lgi~~~~~vVvyc 118 (318)
T 3hzu_A 39 ERLVTADWLSAHMGAPGLAIVESDEDVLLYDVGHIPGAVKIDWHTDLNDPRVRDYINGEQFAELMDRKGIARDDTVVIYG 118 (318)
T ss_dssp GGEECHHHHHHHTTCTTEEEEECCSSTTSGGGCBCTTEEECCHHHHHBCSSSSSBCCHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred CceecHHHHHHhccCCCEEEEECCCChhHHhcCcCCCCeEeCchhhhccCcccCCCCHHHHHHHHHHcCCCCCCeEEEEC
Confidence 457999999998865 489999999876 9999999999999753221 2344455666666665 78899999999
Q ss_pred CCch-HHHHHHHHHH-cCCCCeeEccccHHHhhhCCCCCCC
Q 030104 145 QSGK-RSMMAATDLL-NGFAGITDIAGGFAAWRQNGLPTEP 183 (183)
Q Consensus 145 ~~g~-~s~~a~~~L~-~G~~~v~~l~GG~~~W~~~g~pv~~ 183 (183)
++|. +|.++++.|+ +||++|++|+||+.+|.++|+|+++
T Consensus 119 ~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~ 159 (318)
T 3hzu_A 119 DKSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRETTL 159 (318)
T ss_dssp SGGGHHHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBC
T ss_pred CCCCccHHHHHHHHHHcCCCceEEccCCHHHHhhcCCCccc
Confidence 9887 9999999999 9999999999999999999999863
No 28
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=99.88 E-value=4.3e-23 Score=137.74 Aligned_cols=76 Identities=33% Similarity=0.564 Sum_probs=67.5
Q ss_pred CEEEEcCChhhHhccCCCCceecCcccccCCCCCCCHHHHHHHHhcC--CCCCeEEEEcCCchHHHHHHHHHH-cCCCCe
Q 030104 88 HRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRF--RKHDEIIVGCQSGKRSMMAATDLL-NGFAGI 164 (183)
Q Consensus 88 ~~lIDvR~~~e~~~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~~l--~~~~~ivv~c~~g~~s~~a~~~L~-~G~~~v 164 (183)
++|||||++.||..||||||+|+|+ ..+...+..+ +++++||+||++|.+|..+++.|+ .||++|
T Consensus 2 ~~liDvR~~~e~~~ghIpgA~~ip~------------~~l~~~~~~l~~~~~~~ivv~C~~g~rs~~aa~~L~~~G~~~v 69 (85)
T 2jtq_A 2 EHWIDVRVPEQYQQEHVQGAINIPL------------KEVKERIATAVPDKNDTVKVYCNAGRQSGQAKEILSEMGYTHV 69 (85)
T ss_dssp EEEEECSCHHHHTTEEETTCEECCH------------HHHHHHHHHHCCCTTSEEEEEESSSHHHHHHHHHHHHTTCSSE
T ss_pred CEEEECCCHHHHHhCCCCCCEEcCH------------HHHHHHHHHhCCCCCCcEEEEcCCCchHHHHHHHHHHcCCCCE
Confidence 5799999999999999999999999 4445555554 788999999999999999999999 999999
Q ss_pred eEccccHHHhhh
Q 030104 165 TDIAGGFAAWRQ 176 (183)
Q Consensus 165 ~~l~GG~~~W~~ 176 (183)
+++ ||+.+|..
T Consensus 70 ~~l-GG~~~w~~ 80 (85)
T 2jtq_A 70 ENA-GGLKDIAM 80 (85)
T ss_dssp EEE-EETTTCCS
T ss_pred Eec-cCHHHHhc
Confidence 999 99999964
No 29
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.87 E-value=2.6e-22 Score=161.27 Aligned_cols=111 Identities=19% Similarity=0.195 Sum_probs=93.9
Q ss_pred CcccCHHHHHHHHhC-CCEEEEcC----------ChhhHhccCCCCceecCcccccCC-----CCCCCHHHHHHHHhc--
Q 030104 72 PTSVPVRVAHELLQA-GHRYLDVR----------TPEEFSAGHATGAINVPYMYRVGS-----GMTKNLKFVEEVSTR-- 133 (183)
Q Consensus 72 ~~~i~~~~~~~~~~~-~~~lIDvR----------~~~e~~~ghIpgAvnip~~~~~~~-----~~~~~~~~~~~~~~~-- 133 (183)
...|+++++.+++++ +++||||| ++.||..||||||+|+|+..+... ++..+.+.+...+..
T Consensus 3 ~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~~~~~~~e~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~g 82 (280)
T 1urh_A 3 TWFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMRELG 82 (280)
T ss_dssp CCEECHHHHHTTTTCTTEEEEECCCCCSSCTTCCHHHHHHHSBCTTCEECCGGGGSCSSSSSSSCCCCHHHHHHHHHHTT
T ss_pred CceeeHHHHHHhcCCCCeEEEEeeccCCcccccchhhhhhhCcCCCCEECCHHHhcCCCCCCCCCCCCHHHHHHHHHHcC
Confidence 357899999988864 58999999 788999999999999999754321 344556666666665
Q ss_pred CCCCCeEEEEcCCchH-HHHHHHHHH-cCCCCeeEccccHHHhhhCCCCCC
Q 030104 134 FRKHDEIIVGCQSGKR-SMMAATDLL-NGFAGITDIAGGFAAWRQNGLPTE 182 (183)
Q Consensus 134 l~~~~~ivv~c~~g~~-s~~a~~~L~-~G~~~v~~l~GG~~~W~~~g~pv~ 182 (183)
++++++|||||++|.+ |.++++.|+ +||++|++|+||+.+|.++|+|++
T Consensus 83 i~~~~~ivvyc~~g~~~a~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 133 (280)
T 1urh_A 83 VNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLE 133 (280)
T ss_dssp CCTTSEEEEECSSSCSSHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCB
T ss_pred CCCCCeEEEECCCCCccHHHHHHHHHHcCCCCEEEecCCHHHHHHCCCccc
Confidence 5789999999999998 999999999 999999999999999999999986
No 30
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.87 E-value=9.4e-22 Score=157.68 Aligned_cols=137 Identities=21% Similarity=0.303 Sum_probs=103.9
Q ss_pred eEEccCCccccccccccCCcc-cc----------CCCCcccCHHHHHHHHhCCCEEEEcCChhhHhc-------------
Q 030104 46 IGFISSKILSFCPKASLRGNL-EA----------VGVPTSVPVRVAHELLQAGHRYLDVRTPEEFSA------------- 101 (183)
Q Consensus 46 ~~~l~~~~~~~~~~~~~~~~~-~~----------~~~~~~i~~~~~~~~~~~~~~lIDvR~~~e~~~------------- 101 (183)
+..+.+++.+|.......... .. ......++.+++.++++++. |||||++.||..
T Consensus 106 v~~l~GG~~~W~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~-liDvR~~~e~~~~~~~~~~~~~~~~ 184 (277)
T 3aay_A 106 VKLLDGGRKKWELDGRPLSSDPVSRPVTSYTASPPDNTIRAFRDEVLAAINVKN-LIDVRSPDEFSGKILAPAHLPQEQS 184 (277)
T ss_dssp EEEETTHHHHHHHTTCCCBCCCCCCCCCCCCCCCCCGGGEECHHHHHHTTTTSE-EEECSCHHHHHTSCCC-----CCCC
T ss_pred EEEecCCHHHHHHcCCccccCCCCcCCCCccccCcccchhcCHHHHHHhcCCCC-EEEeCChHHeeeeeccccccccccc
Confidence 457889999996532111100 00 00111367889888876655 999999999985
Q ss_pred ---cCCCCceecCcccccC-CCCCCCHHHHHHHHh--cCCCCCeEEEEcCCchHHHHHHHHHH--cCCCCeeEccccHHH
Q 030104 102 ---GHATGAINVPYMYRVG-SGMTKNLKFVEEVST--RFRKHDEIIVGCQSGKRSMMAATDLL--NGFAGITDIAGGFAA 173 (183)
Q Consensus 102 ---ghIpgAvnip~~~~~~-~~~~~~~~~~~~~~~--~l~~~~~ivv~c~~g~~s~~a~~~L~--~G~~~v~~l~GG~~~ 173 (183)
||||||+|||+..... .+...+.+.++..+. .++++++||+||.+|.||..+++.|. +||++|++|+||+.+
T Consensus 185 ~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~iv~yC~~G~rs~~a~~~L~~~~G~~~v~~l~GG~~~ 264 (277)
T 3aay_A 185 QRPGHIPGAINVPWSRAANEDGTFKSDEELAKLYADAGLDNSKETIAYCRIGERSSHTWFVLRELLGHQNVKNYDGSWTE 264 (277)
T ss_dssp SCCSBCTTCEECCGGGGBCTTSCBCCHHHHHHHHHHHTCCTTSCEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHH
T ss_pred ccCCcCCCceecCHHHhcCCCCcCCCHHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHHHHHHcCCCcceeeCchHHH
Confidence 9999999999975442 344556667777665 37889999999999999999999997 799999999999999
Q ss_pred hhh-CCCCCCC
Q 030104 174 WRQ-NGLPTEP 183 (183)
Q Consensus 174 W~~-~g~pv~~ 183 (183)
|.+ .|+|+++
T Consensus 265 W~~~~g~pv~~ 275 (277)
T 3aay_A 265 YGSLVGAPIEL 275 (277)
T ss_dssp HTTSTTCCCBC
T ss_pred HhcCCCCCCcc
Confidence 998 8999864
No 31
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=99.87 E-value=2e-22 Score=145.60 Aligned_cols=105 Identities=22% Similarity=0.327 Sum_probs=85.3
Q ss_pred CcccCHHHHHHHHh-C-CCEEEEcCChhhHhc-cCC------CCceecCcccccCCCCCCCHHHHHHHHhcC--CCCCeE
Q 030104 72 PTSVPVRVAHELLQ-A-GHRYLDVRTPEEFSA-GHA------TGAINVPYMYRVGSGMTKNLKFVEEVSTRF--RKHDEI 140 (183)
Q Consensus 72 ~~~i~~~~~~~~~~-~-~~~lIDvR~~~e~~~-ghI------pgAvnip~~~~~~~~~~~~~~~~~~~~~~l--~~~~~i 140 (183)
...|+++++.++++ + +++|||||++.||.. +|+ |||+|||+... ....++..+...+ +++++|
T Consensus 4 ~~~is~~e~~~~l~~~~~~~liDVR~~~E~~~~~~~~~~g~~~ga~~ip~~~~------~~~~~~~~l~~~~~~~~~~~i 77 (134)
T 1vee_A 4 GSSGSAKNAYTKLGTDDNAQLLDIRATADFRQVGSPNIKGLGKKAVSTVYNGE------DKPGFLKKLSLKFKDPENTTL 77 (134)
T ss_dssp SCBCCHHHHHHHHHHCTTEEEEECSCHHHHHHTCEECCTTTSCCCEECCCCGG------GHHHHHHHHHTTCSCGGGCEE
T ss_pred CCccCHHHHHHHHHhCCCeEEEEcCCHHHHhhcCCCcccccCCceEEeecccc------cChhHHHHHHHHhCCCCCCEE
Confidence 45689999998886 3 589999999999985 443 79999998521 1223444444433 678999
Q ss_pred EEEcCCchHHHHHHHHHH-cCCCCeeEccccH---HHhhhCCCCCC
Q 030104 141 IVGCQSGKRSMMAATDLL-NGFAGITDIAGGF---AAWRQNGLPTE 182 (183)
Q Consensus 141 vv~c~~g~~s~~a~~~L~-~G~~~v~~l~GG~---~~W~~~g~pv~ 182 (183)
||||++|.||..++..|+ .||++|++|.||+ .+|.++|+|++
T Consensus 78 vv~C~sG~RS~~aa~~L~~~G~~~v~~l~GG~~~~~~W~~~g~p~~ 123 (134)
T 1vee_A 78 YILDKFDGNSELVAELVALNGFKSAYAIKDGAEGPRGWLNSSLPWI 123 (134)
T ss_dssp EEECSSSTTHHHHHHHHHHHTCSEEEECTTTTTSTTSSGGGTCCEE
T ss_pred EEEeCCCCcHHHHHHHHHHcCCcceEEecCCccCCcchhhcCCCCC
Confidence 999999999999999999 9999999999999 78999999986
No 32
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.86 E-value=6.1e-22 Score=169.89 Aligned_cols=121 Identities=26% Similarity=0.448 Sum_probs=101.0
Q ss_pred ceeEEccCCccccccccccCCccccCCCCcccCHHHHHHHHhC-CCEEEEcCChhhHhccCCCCceecCcccccCCCCCC
Q 030104 44 DNIGFISSKILSFCPKASLRGNLEAVGVPTSVPVRVAHELLQA-GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTK 122 (183)
Q Consensus 44 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~lIDvR~~~e~~~ghIpgAvnip~~~~~~~~~~~ 122 (183)
.+..++. ++.+|..... .......++++++.+++++ +.+|||||++.||..||||||+|+|+
T Consensus 352 ~v~~~l~-G~~~W~~~g~------~~~~~~~i~~~~l~~~~~~~~~~lvDvR~~~e~~~ghIpgA~~ip~---------- 414 (474)
T 3tp9_A 352 DVVDWTD-PAAVDRAAPD------DVASYANVSPDEVRGALAQQGLWLLDVRNVDEWAGGHLPQAHHIPL---------- 414 (474)
T ss_dssp CEEEEEC-GGGGTTCCGG------GEECCEEECHHHHHHTTTTTCCEEEECSCHHHHHHCBCTTCEECCH----------
T ss_pred ceEEecC-cHHHHHhccc------ccccccccCHHHHHHHhcCCCcEEEECCCHHHHhcCcCCCCEECCH----------
Confidence 3444455 8888874211 1223467899999988765 59999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCCeEEEEcCCchHHHHHHHHHH-cCCCCeeEccccHHHhhhCCCCCCC
Q 030104 123 NLKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLL-NGFAGITDIAGGFAAWRQNGLPTEP 183 (183)
Q Consensus 123 ~~~~~~~~~~~l~~~~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~GG~~~W~~~g~pv~~ 183 (183)
..+......++++++||+||.+|.||..++..|+ .||++|++|+||+.+|.++|+|+++
T Consensus 415 --~~l~~~~~~l~~~~~vvv~C~~G~ra~~a~~~L~~~G~~~v~~~~Gg~~~W~~~g~p~~~ 474 (474)
T 3tp9_A 415 --SKLAAHIHDVPRDGSVCVYCRTGGRSAIAASLLRAHGVGDVRNMVGGYEAWRGKGFPVEA 474 (474)
T ss_dssp --HHHTTTGGGSCSSSCEEEECSSSHHHHHHHHHHHHHTCSSEEEETTHHHHHHHTTCCCBC
T ss_pred --HHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHHHHcCCCCEEEecChHHHHHhCCCCCCC
Confidence 4555556678899999999999999999999999 9999999999999999999999974
No 33
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.86 E-value=1.6e-21 Score=169.86 Aligned_cols=126 Identities=19% Similarity=0.313 Sum_probs=104.6
Q ss_pred eEEccC-CccccccccccCCccccCCCCcccCHHHHHHHHhC-CCEEEEcCChhhHhccCCCCceecCcccccCCCCCCC
Q 030104 46 IGFISS-KILSFCPKASLRGNLEAVGVPTSVPVRVAHELLQA-GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKN 123 (183)
Q Consensus 46 ~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~lIDvR~~~e~~~ghIpgAvnip~~~~~~~~~~~~ 123 (183)
+..+.+ ++.+|..................++++++.+++++ +.+|||||++.||..||||||+|+|.
T Consensus 349 v~~l~G~G~~~w~~~g~p~~~~~~~~~~~~i~~~~l~~~l~~~~~~liDvR~~~e~~~ghIpgA~~ip~----------- 417 (539)
T 1yt8_A 349 VAVLDGLSEADFSERGAWSAPLPRQPRADTIDPTTLADWLGEPGTRVLDFTASANYAKRHIPGAAWVLR----------- 417 (539)
T ss_dssp EEEECSCCGGGCCBCSSCCCCCCCCCCCCEECHHHHHHHTTSTTEEEEECSCHHHHHHCBCTTCEECCG-----------
T ss_pred EEEecCCChHHHHHhhccccCCCCCCcCCccCHHHHHHHhcCCCeEEEEeCCHHHhhcCcCCCchhCCH-----------
Confidence 445788 99999754322222222345578999999998875 48999999999999999999999998
Q ss_pred HHHHHHHHhcCCCCCeEEEEcCCchHHHHHHHHHH-cCCCCeeEccccHHHhhhCCCCCCC
Q 030104 124 LKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLL-NGFAGITDIAGGFAAWRQNGLPTEP 183 (183)
Q Consensus 124 ~~~~~~~~~~l~~~~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~GG~~~W~~~g~pv~~ 183 (183)
..+...+..++++++|||||.+|.||..++..|+ .||++|++|+||+.+|.++|+|+++
T Consensus 418 -~~l~~~l~~l~~~~~ivv~C~sG~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~pv~~ 477 (539)
T 1yt8_A 418 -SQLKQALERLGTAERYVLTCGSSLLARFAVAEVQALSGKPVFLLDGGTSAWVAAGLPTED 477 (539)
T ss_dssp -GGHHHHHHHHCCCSEEEEECSSSHHHHHHHHHHHHHHCSCEEEETTHHHHHHHTTCCCBC
T ss_pred -HHHHHHHHhCCCCCeEEEEeCCChHHHHHHHHHHHcCCCCEEEeCCcHHHHHhCCCCccc
Confidence 4455556667889999999999999999999999 9999999999999999999999863
No 34
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.86 E-value=9.7e-22 Score=157.60 Aligned_cols=111 Identities=16% Similarity=0.238 Sum_probs=91.7
Q ss_pred cccCHHHHHHHHhC-CCEEEEcCC-hhhHhccCCCCceecCcccccC---CCCCCCHHHHHHHHhc--CCCCCeEEEEcC
Q 030104 73 TSVPVRVAHELLQA-GHRYLDVRT-PEEFSAGHATGAINVPYMYRVG---SGMTKNLKFVEEVSTR--FRKHDEIIVGCQ 145 (183)
Q Consensus 73 ~~i~~~~~~~~~~~-~~~lIDvR~-~~e~~~ghIpgAvnip~~~~~~---~~~~~~~~~~~~~~~~--l~~~~~ivv~c~ 145 (183)
..|+++++.+++++ +++|||||+ +.||..||||||+|+|+...+. .+...+.+.+...+.. ++++++|||||+
T Consensus 6 ~~is~~~l~~~l~~~~~~liDvR~~~~ey~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~vvvyc~ 85 (277)
T 3aay_A 6 VLVSADWAESNLHAPKVVFVEVDEDTSAYDRDHIAGAIKLDWRTDLQDPVKRDFVDAQQFSKLLSERGIANEDTVILYGG 85 (277)
T ss_dssp HEECHHHHHTTTTCTTEEEEEEESSSHHHHHCBSTTCEEEETTTTTBCSSSSSBCCHHHHHHHHHHHTCCTTSEEEEECS
T ss_pred ceEcHHHHHHHhCCCCEEEEEcCCChhhHhhCCCCCcEEecccccccCCCCCCCCCHHHHHHHHHHcCCCCCCeEEEECC
Confidence 46889999888765 489999998 8999999999999999864332 1233445566666655 788999999999
Q ss_pred Cch-HHHHHHHHHH-cCCCCeeEccccHHHhhhCCCCCCC
Q 030104 146 SGK-RSMMAATDLL-NGFAGITDIAGGFAAWRQNGLPTEP 183 (183)
Q Consensus 146 ~g~-~s~~a~~~L~-~G~~~v~~l~GG~~~W~~~g~pv~~ 183 (183)
+|. +|.++++.|+ .||++|++|+||+.+|.++|+|+++
T Consensus 86 ~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 125 (277)
T 3aay_A 86 NNNWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDGRPLSS 125 (277)
T ss_dssp GGGHHHHHHHHHHHHTTCCSEEEETTHHHHHHHTTCCCBC
T ss_pred CCCchHHHHHHHHHHcCCCcEEEecCCHHHHHHcCCcccc
Confidence 875 7889999999 9999999999999999999999863
No 35
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.86 E-value=2.9e-21 Score=156.46 Aligned_cols=112 Identities=19% Similarity=0.205 Sum_probs=93.0
Q ss_pred CcccCHHHHHHHHhC-----CCEEEEcC--------ChhhHhccCCCCceecCcccccCC-----CCCCCHHHHHHHHhc
Q 030104 72 PTSVPVRVAHELLQA-----GHRYLDVR--------TPEEFSAGHATGAINVPYMYRVGS-----GMTKNLKFVEEVSTR 133 (183)
Q Consensus 72 ~~~i~~~~~~~~~~~-----~~~lIDvR--------~~~e~~~ghIpgAvnip~~~~~~~-----~~~~~~~~~~~~~~~ 133 (183)
...|+++++++++++ +++||||| ++.||..||||||+|+|+..+... .+..+.+.+...+..
T Consensus 7 ~~~is~~~l~~~l~~~~~~~~~~liDvR~~~~~~~~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~l~~ 86 (296)
T 1rhs_A 7 RALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFADYVGS 86 (296)
T ss_dssp CSEECHHHHHHHHHTTCCBTTEEEEECCCCCTTSCCHHHHHHHSBCTTCEECCTTTSSCTTSSSSSCCCCHHHHHHHHHH
T ss_pred CceeeHHHHHHHHhccccCCCeEEEEecccCcCCcchhhhHhhCcCCCCEEeCHHHhcCCCCCCCCCCCCHHHHHHHHHH
Confidence 467999999998875 58999999 689999999999999999743321 234455566666554
Q ss_pred --CCCCCeEEEEcCC--chH-HHHHHHHHH-cCCCCeeEccccHHHhhhCCCCCCC
Q 030104 134 --FRKHDEIIVGCQS--GKR-SMMAATDLL-NGFAGITDIAGGFAAWRQNGLPTEP 183 (183)
Q Consensus 134 --l~~~~~ivv~c~~--g~~-s~~a~~~L~-~G~~~v~~l~GG~~~W~~~g~pv~~ 183 (183)
++++++|||||.+ |.+ +.++++.|+ +||++|++|+||+.+|.++|+|+++
T Consensus 87 lgi~~~~~vVvyc~~~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~ 142 (296)
T 1rhs_A 87 LGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTS 142 (296)
T ss_dssp TTCCTTCEEEEECCCSSSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBC
T ss_pred cCCCCCCeEEEEcCCCCCcchHHHHHHHHHHcCCCcEEEcCCCHHHHHHcCCcccc
Confidence 6788999999999 876 779999999 9999999999999999999999863
No 36
>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1
Probab=99.85 E-value=1.6e-21 Score=144.83 Aligned_cols=101 Identities=17% Similarity=0.291 Sum_probs=82.8
Q ss_pred CCCcccCHHHHHHHHhC-------CCEEEEcCChhhHhccCCCCceecCcccccCCCCCCCHHHHHHHHh---cC-CCCC
Q 030104 70 GVPTSVPVRVAHELLQA-------GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVST---RF-RKHD 138 (183)
Q Consensus 70 ~~~~~i~~~~~~~~~~~-------~~~lIDvR~~~e~~~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~---~l-~~~~ 138 (183)
.....|+++++.+++++ +++|||||++.||..||||||+|||+. +....... .+ ++++
T Consensus 20 ~~~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~-----------~~~~~~~~~~~~~~~~~~ 88 (161)
T 1c25_A 20 QDLKYISPEIMASVLNGKFANLIKEFVIIDCRYPYEYEGGHIKGAVNLHME-----------EEVEDFLLKKPIVPTDGK 88 (161)
T ss_dssp TTSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSH-----------HHHHHHTTTSCCCCCTTS
T ss_pred CCcceeCHHHHHHHHhccccccCCCeEEEECCChHHccCCcccCcEeCChh-----------HHHHHHHhhhhhccCCCC
Confidence 44578999999998875 589999999999999999999999994 23333322 22 5677
Q ss_pred eE--EEEcC-CchHHHHHHHHHH-c----------CCCCeeEccccHHHhhhCCCCC
Q 030104 139 EI--IVGCQ-SGKRSMMAATDLL-N----------GFAGITDIAGGFAAWRQNGLPT 181 (183)
Q Consensus 139 ~i--vv~c~-~g~~s~~a~~~L~-~----------G~~~v~~l~GG~~~W~~~g~pv 181 (183)
+| |+||. +|.||..++..|+ . ||++|++|+||+.+|.+++.|+
T Consensus 89 ~ivvv~yC~~sg~rs~~aa~~L~~~~~~~~~l~~~G~~~v~~l~GG~~~W~~~~~~~ 145 (161)
T 1c25_A 89 RVIVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQSY 145 (161)
T ss_dssp EEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHHHGGG
T ss_pred CeEEEEEcCCCCcchHHHHHHHHHHHHhhhhccccCCceEEEEcCCHHHHHHHcccc
Confidence 76 57899 9999999999987 6 9999999999999999887664
No 37
>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A
Probab=99.85 E-value=2.9e-21 Score=145.33 Aligned_cols=101 Identities=17% Similarity=0.204 Sum_probs=81.0
Q ss_pred CCCcccCHHHHHHHHhC-------CCEEEEcCChhhHhccCCCCceecCcccccCCCCCCCHHHHHHHHh---cCC--CC
Q 030104 70 GVPTSVPVRVAHELLQA-------GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVST---RFR--KH 137 (183)
Q Consensus 70 ~~~~~i~~~~~~~~~~~-------~~~lIDvR~~~e~~~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~---~l~--~~ 137 (183)
.....|+++++.+++++ +++|||||++.||..||||||+|||+. +....... .++ ++
T Consensus 21 ~~~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~ey~~ghIpgAinip~~-----------~l~~~~~~~~~~~~~~~~ 89 (175)
T 2a2k_A 21 QDLKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAVNLPLE-----------RDAESFLLKSPIAPCSLD 89 (175)
T ss_dssp TTSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSH-----------HHHHHHHHSSCCCC----
T ss_pred CCCceeCHHHHHHHHhcccccCCCCEEEEECCCHHHHcCCcCCCcEECChh-----------HHHHHhhhhhhhccccCC
Confidence 45678999999998875 489999999999999999999999994 22222222 133 67
Q ss_pred CeEEE--EcC-CchHHHHHHHHHH-c----------CCCCeeEccccHHHhhhCCCCC
Q 030104 138 DEIIV--GCQ-SGKRSMMAATDLL-N----------GFAGITDIAGGFAAWRQNGLPT 181 (183)
Q Consensus 138 ~~ivv--~c~-~g~~s~~a~~~L~-~----------G~~~v~~l~GG~~~W~~~g~pv 181 (183)
++||| ||+ +|.||..++..|+ . ||++|++|+||+.+|.+++.++
T Consensus 90 ~~ivvv~yC~~~g~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~~~~~ 147 (175)
T 2a2k_A 90 KRVILIFHSEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNF 147 (175)
T ss_dssp CEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGG
T ss_pred CCeEEEEECCCCCCccHHHHHHHHHhhhhhhhhhhcCCceEEEEcCCHHHHHHHCccc
Confidence 88855 598 9999999999887 5 9999999999999999988765
No 38
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.85 E-value=1e-21 Score=158.10 Aligned_cols=110 Identities=17% Similarity=0.213 Sum_probs=91.3
Q ss_pred cccCHHHHHHHHhC-CCEEEEcC-ChhhHhccCCCCceecCcccccC---CCCCCCHHHHHHHHhc--CCCCCeEEEEcC
Q 030104 73 TSVPVRVAHELLQA-GHRYLDVR-TPEEFSAGHATGAINVPYMYRVG---SGMTKNLKFVEEVSTR--FRKHDEIIVGCQ 145 (183)
Q Consensus 73 ~~i~~~~~~~~~~~-~~~lIDvR-~~~e~~~ghIpgAvnip~~~~~~---~~~~~~~~~~~~~~~~--l~~~~~ivv~c~ 145 (183)
..|+++++++++++ +++||||| ++.||..||||||+|+|+...+. .....+.+.+...+.. ++++++|||||+
T Consensus 8 ~~is~~~l~~~l~~~~~~liDvR~~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~ivvyc~ 87 (285)
T 1uar_A 8 VLVSTDWVQEHLEDPKVRVLEVDEDILLYDTGHIPGAQKIDWQRDFWDPVVRDFISEEEFAKLMERLGISNDTTVVLYGD 87 (285)
T ss_dssp GEECHHHHHTTTTCTTEEEEEECSSTTHHHHCBCTTCEEECHHHHHBCSSSSSBCCHHHHHHHHHHTTCCTTCEEEEECH
T ss_pred ceEcHHHHHHhcCCCCEEEEEcCCCcchhhcCcCCCCEECCchhhccCCcccCCCCHHHHHHHHHHcCCCCCCeEEEECC
Confidence 57899999988875 48999999 68999999999999999863221 2233344555665554 588999999999
Q ss_pred Cch-HHHHHHHHHH-cCCCCeeEccccHHHhhhCCCCCC
Q 030104 146 SGK-RSMMAATDLL-NGFAGITDIAGGFAAWRQNGLPTE 182 (183)
Q Consensus 146 ~g~-~s~~a~~~L~-~G~~~v~~l~GG~~~W~~~g~pv~ 182 (183)
+|. +|.++++.|+ .||++|++|+||+.+|.++|+|++
T Consensus 88 ~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 126 (285)
T 1uar_A 88 KNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEEGRPLT 126 (285)
T ss_dssp HHHHHHHHHHHHHHHTTCSCEEEETTHHHHHHHHTCCCB
T ss_pred CCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCccc
Confidence 998 7999999999 999999999999999999999875
No 39
>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A
Probab=99.85 E-value=9.7e-22 Score=144.73 Aligned_cols=108 Identities=19% Similarity=0.172 Sum_probs=78.8
Q ss_pred CcccCHHHHHHHHhC---CCEEEEcCChhhHhccCCCCceecCcccccCC----CCCCCHHHH-HHHHh--cCCCCCeEE
Q 030104 72 PTSVPVRVAHELLQA---GHRYLDVRTPEEFSAGHATGAINVPYMYRVGS----GMTKNLKFV-EEVST--RFRKHDEII 141 (183)
Q Consensus 72 ~~~i~~~~~~~~~~~---~~~lIDvR~~~e~~~ghIpgAvnip~~~~~~~----~~~~~~~~~-~~~~~--~l~~~~~iv 141 (183)
.+.|+++++.+++++ +++|||||++.||..||||||+|||+..++.. +.......+ ..... .++++++||
T Consensus 3 ~~~Is~~~l~~~l~~~~~~~~iiDvR~~~ey~~gHIpgAinip~~~l~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~iV 82 (153)
T 2vsw_A 3 GTQIVTERLVALLESGTEKVLLIDSRPFVEYNTSHILEAININCSKLMKRRLQQDKVLITELIQHSAKHKVDIDCSQKVV 82 (153)
T ss_dssp CEEECHHHHHHHHTSTTCCEEEEECSCHHHHHHCEETTCEECCCCHHHHHHHHTTSSCHHHHHHHSCSSCCCCCTTSEEE
T ss_pred CccccHHHHHHHHhcCCCCEEEEECCCHHHhccCccCCCeeeChHHHHHhhhhcCCcCHHHhcCchhhhhhccCCCCeEE
Confidence 357899999998863 48999999999999999999999999632100 000000000 00001 246789999
Q ss_pred EEcCCchHHHHH------HHHHH-c--CCCCeeEccccHHHhhhCCC
Q 030104 142 VGCQSGKRSMMA------ATDLL-N--GFAGITDIAGGFAAWRQNGL 179 (183)
Q Consensus 142 v~c~~g~~s~~a------~~~L~-~--G~~~v~~l~GG~~~W~~~g~ 179 (183)
|||++|.++..+ ++.|+ + ||++|++|+||+.+|.+.+.
T Consensus 83 vyc~~g~~s~~a~~~~~~~~~L~~l~~G~~~v~~L~GG~~~W~~~~~ 129 (153)
T 2vsw_A 83 VYDQSSQDVASLSSDCFLTVLLGKLEKSFNSVHLLAGGFAEFSRCFP 129 (153)
T ss_dssp EECSSCCCGGGSCTTSHHHHHHHHHHHHCSCEEEETTHHHHHHHHCG
T ss_pred EEeCCCCcccccccchHHHHHHHHHHhCCCcEEEEeChHHHHHHhCh
Confidence 999999987655 57777 6 99999999999999987643
No 40
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.85 E-value=7.8e-21 Score=154.61 Aligned_cols=114 Identities=18% Similarity=0.187 Sum_probs=92.2
Q ss_pred CCCcccCHHHHHHHHhC-----CCEEEEcC---------ChhhHhccCCCCceecCcccccC-----CCCCCCHHHHHHH
Q 030104 70 GVPTSVPVRVAHELLQA-----GHRYLDVR---------TPEEFSAGHATGAINVPYMYRVG-----SGMTKNLKFVEEV 130 (183)
Q Consensus 70 ~~~~~i~~~~~~~~~~~-----~~~lIDvR---------~~~e~~~ghIpgAvnip~~~~~~-----~~~~~~~~~~~~~ 130 (183)
.....|+++++.+++++ +++||||| ++.||..||||||+|||++.+.. .+...+.+.+...
T Consensus 19 ~~~~lIs~~~l~~~l~~~~~~~~~~ilDvR~~~~~~~~~~~~ey~~gHIpGAi~i~~~~~~~~~~~~~~~lp~~~~~~~~ 98 (302)
T 3olh_A 19 YFQSMVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDRTSPYDHMLPGAEHFAEY 98 (302)
T ss_dssp -CCCEECHHHHHHHHHCCCSSCCEEEEECCCCCCC--CCHHHHHHHSCCTTCEECCTTTSSCSSCSSSSCCCCHHHHHHH
T ss_pred CCCCccCHHHHHHHhcCcCCCCCEEEEEeecCCCccCcccHHHHhhCcCCCCeEeCHHHhcCcCCCCCCCCCCHHHHHHH
Confidence 34567999999998875 68999999 78999999999999999864321 2334455666666
Q ss_pred Hhc--CCCCCeEEEEcCC---chHHHHHHHHHH-cCCCCeeEccccHHHhhhCCCCCCC
Q 030104 131 STR--FRKHDEIIVGCQS---GKRSMMAATDLL-NGFAGITDIAGGFAAWRQNGLPTEP 183 (183)
Q Consensus 131 ~~~--l~~~~~ivv~c~~---g~~s~~a~~~L~-~G~~~v~~l~GG~~~W~~~g~pv~~ 183 (183)
+.. ++++++|||||++ +.+|.++++.|+ +||++|++|+||+.+|.++|+|+++
T Consensus 99 ~~~lgi~~~~~VVvyc~~~~g~~~a~ra~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~ 157 (302)
T 3olh_A 99 AGRLGVGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLDGGLRHWLRQNLPLSS 157 (302)
T ss_dssp HHHTTCCSSCEEEEECCCTTSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHSCCC-CC
T ss_pred HHHcCCCCCCEEEEEeCCCCCcchHHHHHHHHHHcCCCcEEECCCCHHHHHHcCCCccc
Confidence 665 4788999999964 346999999999 9999999999999999999999863
No 41
>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}
Probab=99.85 E-value=5.8e-21 Score=148.46 Aligned_cols=97 Identities=20% Similarity=0.269 Sum_probs=78.5
Q ss_pred CCCcccCHHHHHHHHhC-------CCEEEEcCChhhHhccCCCCceecCcccccCCCCCCCHHHHHHHHhc---C--CCC
Q 030104 70 GVPTSVPVRVAHELLQA-------GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTR---F--RKH 137 (183)
Q Consensus 70 ~~~~~i~~~~~~~~~~~-------~~~lIDvR~~~e~~~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~~---l--~~~ 137 (183)
.....|+++++.+++++ +++|||||++.||..||||||+|||+. +.+...+.. + +++
T Consensus 54 ~~~~~Is~~eL~~~l~~~~~~~~~~~~lIDVR~~~Ey~~GHIpGAinIP~~-----------~~l~~~l~~~~~~~~~~~ 122 (216)
T 3op3_A 54 QDLKYVNPETVAALLSGKFQGLIEKFYVIDCRYPYEYLGGHIQGALNLYSQ-----------EELFNFFLKKPIVPLDTQ 122 (216)
T ss_dssp SSSEEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTSEETTCEECCSH-----------HHHHHHHTSSCCCCSSTT
T ss_pred CCCCEeCHHHHHHHHhCCCccccCCEEEEEeCcHHHHhcCCccCCEECChH-----------HHHHHHHhhccccccccC
Confidence 34678999999999876 378999999999999999999999984 334443321 2 234
Q ss_pred C--eEEEEcC-CchHHHHHHHHHH-c----------CCCCeeEccccHHHhhhC
Q 030104 138 D--EIIVGCQ-SGKRSMMAATDLL-N----------GFAGITDIAGGFAAWRQN 177 (183)
Q Consensus 138 ~--~ivv~c~-~g~~s~~a~~~L~-~----------G~~~v~~l~GG~~~W~~~ 177 (183)
+ .|||||. +|.||..++..|+ . ||++|++|+||+.+|.++
T Consensus 123 k~~~VVvyC~~SG~Rs~~aa~~L~~~~~~~~~y~~lGf~~V~~L~GG~~aW~~~ 176 (216)
T 3op3_A 123 KRIIIVFHCEFSSERGPRMCRCLREEDRSLNQYPALYYPELYILKGGYRDFFPE 176 (216)
T ss_dssp SEEEEEEECCC--CCHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTT
T ss_pred CCCEEEEEeCCCChHHHHHHHHHHHcCcccccccccCCCcEEEECCcHHHHHHh
Confidence 4 4999999 9999999999998 7 899999999999999875
No 42
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=99.85 E-value=3.7e-21 Score=153.63 Aligned_cols=102 Identities=21% Similarity=0.239 Sum_probs=85.0
Q ss_pred CCCcccCHHHHHHHHhCC-CEEEEcCChhhHhccCCCCceecCcccccCCCCCCCHHHHHHHHhc--CCCCCeEEEEcCC
Q 030104 70 GVPTSVPVRVAHELLQAG-HRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTR--FRKHDEIIVGCQS 146 (183)
Q Consensus 70 ~~~~~i~~~~~~~~~~~~-~~lIDvR~~~e~~~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~~--l~~~~~ivv~c~~ 146 (183)
.....|+++++.++++++ ++|||||++.||..||||||+|+|+..+. ++..+.... .+++++||+||++
T Consensus 119 ~~~~~Is~~el~~ll~~~~~vlIDVR~~~Ey~~GHIpGAiniP~~~~~--------~~~~~l~~~l~~~kdk~IVvyC~~ 190 (265)
T 4f67_A 119 NAGTYLSPEEWHQFIQDPNVILLDTRNDYEYELGTFKNAINPDIENFR--------EFPDYVQRNLIDKKDKKIAMFCTG 190 (265)
T ss_dssp CTTCEECHHHHHHHTTCTTSEEEECSCHHHHHHEEETTCBCCCCSSGG--------GHHHHHHHHTGGGTTSCEEEECSS
T ss_pred CCCceECHHHHHHHhcCCCeEEEEeCCchHhhcCcCCCCEeCCHHHHH--------hhHHHHHHhhhhCCCCeEEEEeCC
Confidence 456789999999998765 99999999999999999999999985321 222222222 3678999999999
Q ss_pred chHHHHHHHHHH-cCCCCeeEccccHHHhhhCCC
Q 030104 147 GKRSMMAATDLL-NGFAGITDIAGGFAAWRQNGL 179 (183)
Q Consensus 147 g~~s~~a~~~L~-~G~~~v~~l~GG~~~W~~~g~ 179 (183)
|.||..+++.|+ .||++|++|+||+.+|.++..
T Consensus 191 G~RS~~Aa~~L~~~Gf~nV~~L~GGi~aW~~~~~ 224 (265)
T 4f67_A 191 GIRCEKTTAYMKELGFEHVYQLHDGILNYLESIP 224 (265)
T ss_dssp SHHHHHHHHHHHHHTCSSEEEETTHHHHHHHHSC
T ss_pred ChHHHHHHHHHHHcCCCCEEEecCHHHHHHHhcC
Confidence 999999999999 999999999999999988643
No 43
>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A
Probab=99.85 E-value=4e-21 Score=148.94 Aligned_cols=101 Identities=18% Similarity=0.236 Sum_probs=83.6
Q ss_pred CCCcccCHHHHHHHHhC-------CCEEEEcCChhhHhccCCCCceecCcccccCCCCCCCHHHHHHHHh---cCC--CC
Q 030104 70 GVPTSVPVRVAHELLQA-------GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVST---RFR--KH 137 (183)
Q Consensus 70 ~~~~~i~~~~~~~~~~~-------~~~lIDvR~~~e~~~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~---~l~--~~ 137 (183)
.....|+++++.+++++ +++|||||++.||..||||||+|||+. +....... .++ ++
T Consensus 41 ~~~~~Is~~el~~~l~~~~~~~~~~~~lIDvR~~~Ey~~gHIpGAinip~~-----------~l~~~~~~~~~~l~~~~d 109 (211)
T 1qb0_A 41 QDLKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAVNLPLE-----------RDAESFLLKSPIAPCSLD 109 (211)
T ss_dssp TTSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSH-----------HHHHHHHHTTTCCCSSTT
T ss_pred CCCCeeCHHHHHHHHhcccccCCCCEEEEECCCHHHHccCcCCCCEECCch-----------HHHHHhhhhhhhccccCC
Confidence 45678999999998875 489999999999999999999999994 22232222 343 67
Q ss_pred CeE--EEEcC-CchHHHHHHHHHH-c----------CCCCeeEccccHHHhhhCCCCC
Q 030104 138 DEI--IVGCQ-SGKRSMMAATDLL-N----------GFAGITDIAGGFAAWRQNGLPT 181 (183)
Q Consensus 138 ~~i--vv~c~-~g~~s~~a~~~L~-~----------G~~~v~~l~GG~~~W~~~g~pv 181 (183)
++| |+||. +|.||..+++.|+ . ||++|++|+||+.+|.++|.++
T Consensus 110 ~~ivvVvyC~~sG~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~g~~~ 167 (211)
T 1qb0_A 110 KRVILIFHCEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNF 167 (211)
T ss_dssp SEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGG
T ss_pred CCeEEEEECCCCCccHHHHHHHHHhhhhhhhhhhhcCCCeEEEECCHHHHHHHHCccc
Confidence 887 78899 9999999998886 4 9999999999999999988765
No 44
>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}
Probab=99.84 E-value=7.3e-21 Score=140.28 Aligned_cols=102 Identities=20% Similarity=0.246 Sum_probs=77.9
Q ss_pred CcccCHHHHHHHHhC-----CCEEEEcCChhhHhccCCCCceecCcccccCCCCCCCHHHHHHHHhcCC-CC-CeEEEEc
Q 030104 72 PTSVPVRVAHELLQA-----GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFR-KH-DEIIVGC 144 (183)
Q Consensus 72 ~~~i~~~~~~~~~~~-----~~~lIDvR~~~e~~~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~~l~-~~-~~ivv~c 144 (183)
...|+++++.+++++ +++|||||++ ||..||||||+|||+..+. ...+..+...+. ++ +.||+||
T Consensus 4 ~~~Is~~el~~~l~~~~~~~~~~lIDvR~~-ey~~gHIpGAinip~~~l~-------~~~~~~l~~~l~~~~~~~vV~yC 75 (152)
T 2j6p_A 4 YTYIKPEELVELLDNPDSLVKAAVIDCRDS-DRDCGFIVNSINMPTISCT-------EEMYEKLAKTLFEEKKELAVFHC 75 (152)
T ss_dssp CEEECHHHHHHHHHSHHHHHTEEEEECCST-TGGGCBCTTCEECCTTTCC-------HHHHHHHHHHHHHTTCCEEEEEC
T ss_pred cCccCHHHHHHHHhCCCCCCCEEEEEcCcH-HhCcCcCCCcEECChhHhh-------HHHHHHHHHHhcccCCCEEEEEc
Confidence 457899999998876 6899999999 9999999999999995321 112222222221 33 4577779
Q ss_pred -CCchHHHHHH----HHHH-cCC--CCeeEccccHHHhhhCCCCC
Q 030104 145 -QSGKRSMMAA----TDLL-NGF--AGITDIAGGFAAWRQNGLPT 181 (183)
Q Consensus 145 -~~g~~s~~a~----~~L~-~G~--~~v~~l~GG~~~W~~~g~pv 181 (183)
.+|.|+..++ +.|. .|| .+|++|+||+.+|.+++.++
T Consensus 76 ~~sg~rs~~aa~~~~~~L~~~G~~~~~v~~L~GG~~~W~~~g~~~ 120 (152)
T 2j6p_A 76 AQSLVRAPKGANRFALAQKKLGYVLPAVYVLRGGWEAFYHMYGDV 120 (152)
T ss_dssp SSSSSHHHHHHHHHHHHHHHHTCCCSEEEEETTHHHHHHHHHTTT
T ss_pred CCCCCccHHHHHHHHHHHHHcCCCCCCEEEEcCcHHHHHHHcCCC
Confidence 7999998887 6778 897 58999999999999987765
No 45
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.83 E-value=6.7e-21 Score=149.10 Aligned_cols=98 Identities=34% Similarity=0.502 Sum_probs=82.1
Q ss_pred ccCHHHHHHHHhCCCEEEEcCChhhHhc----------cCCCCceecCcccccCCCCCCCHHHHHHHHhcCCCCCeEEEE
Q 030104 74 SVPVRVAHELLQAGHRYLDVRTPEEFSA----------GHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVG 143 (183)
Q Consensus 74 ~i~~~~~~~~~~~~~~lIDvR~~~e~~~----------ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~ 143 (183)
.++.+++.+ +++|||||++.||.. ||||||+|+|+.++.... +.+.. ..++++++||+|
T Consensus 122 ~i~~~e~~~----~~~liDvR~~~e~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~-----e~~~~--~~~~~~~~iv~~ 190 (230)
T 2eg4_A 122 LLTADEAAR----HPLLLDVRSPEEFQGKVHPPCCPRGGRIPGSKNAPLELFLSPE-----GLLER--LGLQPGQEVGVY 190 (230)
T ss_dssp BCCHHHHHT----CSCEEECSCHHHHTTSCCCTTSSSCCBCTTCEECCGGGGGCCT-----THHHH--HTCCTTCEEEEE
T ss_pred eeCHHHHhh----CCeEEeCCCHHHcCcccCCCCCccCCCCCCcEEcCHHHhCChH-----HHHHh--cCCCCCCCEEEE
Confidence 577777765 789999999999998 999999999996543221 11111 247889999999
Q ss_pred cCCchHHHHHHHHHH-cCCCCeeEccccHHHhhhCCCCCCC
Q 030104 144 CQSGKRSMMAATDLL-NGFAGITDIAGGFAAWRQNGLPTEP 183 (183)
Q Consensus 144 c~~g~~s~~a~~~L~-~G~~~v~~l~GG~~~W~~~g~pv~~ 183 (183)
|.+|.||..++..|+ .| .+|++|+||+.+|.++|+|+++
T Consensus 191 C~~G~rs~~a~~~L~~~G-~~v~~~~Gg~~~W~~~g~p~~~ 230 (230)
T 2eg4_A 191 CHSGARSAVAFFVLRSLG-VRARNYLGSMHEWLQEGLPTEP 230 (230)
T ss_dssp CSSSHHHHHHHHHHHHTT-CEEEECSSHHHHHHHTTCCCBC
T ss_pred cCChHHHHHHHHHHHHcC-CCcEEecCcHHHHhhcCCCCCC
Confidence 999999999999999 99 8999999999999999999874
No 46
>2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens}
Probab=99.83 E-value=6.4e-21 Score=137.86 Aligned_cols=106 Identities=20% Similarity=0.260 Sum_probs=73.7
Q ss_pred ccCHHHHHH--------HHhC-CCEEEEcCChhhHhccCCCCceecCcccccCC-----CCCCCHHHHHH-----HHhcC
Q 030104 74 SVPVRVAHE--------LLQA-GHRYLDVRTPEEFSAGHATGAINVPYMYRVGS-----GMTKNLKFVEE-----VSTRF 134 (183)
Q Consensus 74 ~i~~~~~~~--------~~~~-~~~lIDvR~~~e~~~ghIpgAvnip~~~~~~~-----~~~~~~~~~~~-----~~~~l 134 (183)
.|+++++.+ ++++ +++|||||++.||..||||||+|+|+...+.. ........+.. ....+
T Consensus 2 ~Is~~~l~~~l~~~~~~~l~~~~~~iiDvR~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (142)
T 2ouc_A 2 IIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLDLISCREGKDSFKRI 81 (142)
T ss_dssp EECHHHHHHHHHC----------CEEEECSCHHHHHHEEETTCEECCCSSHHHHHHHHTTSSCHHHHHHTTSCTTHHHHH
T ss_pred ccCHHHHHHHHHhcccccCCCCCCEEEEeCCHHHhhhhhccCccccCccHHHHHHHhhcCCcchhhhCCChhhhHHHhcc
Confidence 478888887 4443 48999999999999999999999999632210 00000011100 00000
Q ss_pred CCCCeEEEEcCCchHH---------HHHHHHHH-cCCCCeeEccccHHHhhhCCCCC
Q 030104 135 RKHDEIIVGCQSGKRS---------MMAATDLL-NGFAGITDIAGGFAAWRQNGLPT 181 (183)
Q Consensus 135 ~~~~~ivv~c~~g~~s---------~~a~~~L~-~G~~~v~~l~GG~~~W~~~g~pv 181 (183)
.+++|||||++|.++ ..++..|. .|| +|++|+||+.+|.++|.++
T Consensus 82 -~~~~ivvyc~~g~~~~~~~~~~~~~~~~~~L~~~G~-~v~~l~GG~~~w~~~g~~~ 136 (142)
T 2ouc_A 82 -FSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQNHENL 136 (142)
T ss_dssp -HHSCEEEECSSCCCGGGCCTTSHHHHHHHHHHHTTC-CCEEETTHHHHHTTTCGGG
T ss_pred -CCCcEEEEECCCCchhhcCcccHHHHHHHHHHHcCC-cEEEEccCHHHHHHHCHHh
Confidence 268899999999874 45777889 999 9999999999999998775
No 47
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.83 E-value=8.2e-21 Score=158.70 Aligned_cols=109 Identities=17% Similarity=0.070 Sum_probs=90.3
Q ss_pred CcccCHHHHHHHHhCCCEEEEcCC--------hhhHhccCCCCceecCccc-ccC-------CCCCCCHHHHHHHHh--c
Q 030104 72 PTSVPVRVAHELLQAGHRYLDVRT--------PEEFSAGHATGAINVPYMY-RVG-------SGMTKNLKFVEEVST--R 133 (183)
Q Consensus 72 ~~~i~~~~~~~~~~~~~~lIDvR~--------~~e~~~ghIpgAvnip~~~-~~~-------~~~~~~~~~~~~~~~--~ 133 (183)
...|+++++++++++ ++|||||+ +.||..||||||+|+|+.. +.. .+...+.+.+...+. .
T Consensus 13 ~~~Is~~el~~~l~~-~~iIDvR~~~~~~~~~~~ey~~gHIpGAi~ip~~~~l~~~~~~~~~~~~lp~~~~f~~~l~~~g 91 (373)
T 1okg_A 13 KVFLDPSEVADHLAE-YRIVDCRYSLKIKDHGSIQYAKEHVKSAIRADVDTNLSKLVPTSTARHPLPPXAEFIDWCMANG 91 (373)
T ss_dssp CCEECHHHHTTCGGG-SEEEECCCCSSSTTTTTTHHHHCEETTCEECCTTTTSCCCCTTCCCSSCCCCHHHHHHHHHHTT
T ss_pred CcEEcHHHHHHHcCC-cEEEEecCCccccccchhHHhhCcCCCCEEeCchhhhhcccccCCccccCCCHHHHHHHHHHcC
Confidence 568999999988877 99999998 6999999999999999975 322 133445555555554 3
Q ss_pred CCCCCeEEEEc-CCchHHH-HHHHHHH-cCCCCeeEccccHHHhhhCCCCCC
Q 030104 134 FRKHDEIIVGC-QSGKRSM-MAATDLL-NGFAGITDIAGGFAAWRQNGLPTE 182 (183)
Q Consensus 134 l~~~~~ivv~c-~~g~~s~-~a~~~L~-~G~~~v~~l~GG~~~W~~~g~pv~ 182 (183)
++++++||||| .+|.++. ++++.|+ +|| +|++|+||+.+|.++|+|++
T Consensus 92 i~~d~~VVvYc~~~G~rsa~ra~~~L~~~G~-~V~~L~GG~~aW~~~g~pv~ 142 (373)
T 1okg_A 92 MAGELPVLCYDDECGAMGGCRLWWMLNSLGA-DAYVINGGFQACKAAGLEME 142 (373)
T ss_dssp CSSSSCEEEECSSTTTTTHHHHHHHHHHHTC-CEEEETTTTHHHHTTTCCEE
T ss_pred CCCCCeEEEEeCCCCchHHHHHHHHHHHcCC-eEEEeCCCHHHHHhhcCCcc
Confidence 68899999999 7788886 9999999 999 99999999999999999875
No 48
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.83 E-value=3e-20 Score=157.44 Aligned_cols=138 Identities=13% Similarity=0.173 Sum_probs=104.2
Q ss_pred eEEccCCccccccccccCCc-ccc-------------CCCCcccCHHHHHHHHhC-CCEEEEcCChhhH-----------
Q 030104 46 IGFISSKILSFCPKASLRGN-LEA-------------VGVPTSVPVRVAHELLQA-GHRYLDVRTPEEF----------- 99 (183)
Q Consensus 46 ~~~l~~~~~~~~~~~~~~~~-~~~-------------~~~~~~i~~~~~~~~~~~-~~~lIDvR~~~e~----------- 99 (183)
+..+.+++..|......... ... ......++.+++.+++++ +.+|||||++.||
T Consensus 231 v~~l~Gg~~~W~~~g~pv~~g~~~~~~~~~~~~~~~~~~~~~~i~~~e~~~~l~~~~~~liDvR~~~e~~G~~~~~~~~~ 310 (423)
T 2wlr_A 231 VRLLDGGWQTWSDAGLPVERGTPPKVKAEPDFGVKIPAQPQLMLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIK 310 (423)
T ss_dssp EEEETTTHHHHHHTTCCCBCSSCCCCCCCCCCSSCSCSCGGGEECHHHHHTTTTCSSEEEEECSCHHHHHTSCCSSTTCC
T ss_pred eEEECCCHHHHhhCCCCcccCCCCCCCCCcCcccccCCChhheecHHHHHHHhcCCCceEEecCchhheeeeccCCCCCC
Confidence 45788999999642111110 000 011234788999887764 4889999999999
Q ss_pred hccCCCCceecCcc-------ccc-CCCCCCCHHHHHHHHh--cCCCCCeEEEEcCCchHHHHHHHHHH-cCCCCeeEcc
Q 030104 100 SAGHATGAINVPYM-------YRV-GSGMTKNLKFVEEVST--RFRKHDEIIVGCQSGKRSMMAATDLL-NGFAGITDIA 168 (183)
Q Consensus 100 ~~ghIpgAvnip~~-------~~~-~~~~~~~~~~~~~~~~--~l~~~~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~ 168 (183)
..||||||+|+|+. +++ ..+...+.+.+...+. .++++++||+||.+|.||..++..|+ +||++|++|+
T Consensus 311 ~~GhIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ivvyC~sG~rs~~aa~~L~~~G~~~v~~~~ 390 (423)
T 2wlr_A 311 PKGEIAGARWGHAGSDSTHMEDFHNPDGTMRSADDITAMWKAWNIKPEQQVSFYCGTGWRASETFMYARAMGWKNVSVYD 390 (423)
T ss_dssp CCSEETTCEECCCCSSTTCCGGGBCTTSSBCCHHHHHHHHHTTTCCTTSEEEEECSSSHHHHHHHHHHHHTTCSSEEEES
T ss_pred cCCCCCCccccccccccccHHHHcCCCCcCCCHHHHHHHHHHcCCCCCCcEEEECCcHHHHHHHHHHHHHcCCCCcceeC
Confidence 79999999999974 222 2344556667777664 47889999999999999999999999 9999999999
Q ss_pred ccHHHhhh-CCCCCCC
Q 030104 169 GGFAAWRQ-NGLPTEP 183 (183)
Q Consensus 169 GG~~~W~~-~g~pv~~ 183 (183)
||+.+|.+ .++|+++
T Consensus 391 GG~~~W~~~~~~Pv~~ 406 (423)
T 2wlr_A 391 GGWYEWSSDPKNPVAT 406 (423)
T ss_dssp SHHHHHTTSTTSCEEC
T ss_pred ccHHHHhcCCCCCccc
Confidence 99999998 7888763
No 49
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.82 E-value=2.3e-20 Score=162.65 Aligned_cols=100 Identities=25% Similarity=0.337 Sum_probs=86.4
Q ss_pred CcccCHHHHHHHHhC--CCEEEEcCChhhHhccCCCCceecCcccccCCCCCCCHHHHHHHHhcC-CCCCeEEEEcCCch
Q 030104 72 PTSVPVRVAHELLQA--GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRF-RKHDEIIVGCQSGK 148 (183)
Q Consensus 72 ~~~i~~~~~~~~~~~--~~~lIDvR~~~e~~~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~~l-~~~~~ivv~c~~g~ 148 (183)
...|+++++++++++ +++|||||++.||..||||||+|||+. ++.......+ +++++|||||++|.
T Consensus 6 ~~~is~~~l~~~l~~~~~~~liDvR~~~e~~~ghIpgAv~ip~~-----------~~~~~~~~l~~~~~~~iVvyc~~g~ 74 (539)
T 1yt8_A 6 IAVRTFHDIRAALLARRELALLDVREEDPFAQAHPLFAANLPLS-----------RLELEIHARVPRRDTPITVYDDGEG 74 (539)
T ss_dssp CEEECHHHHHHHHHHTCCBEEEECSCHHHHTTSBCTTCEECCGG-----------GHHHHHHHHSCCTTSCEEEECSSSS
T ss_pred CcccCHHHHHHHHhCCCCeEEEECCCHHHHhcCcCCCCEECCHH-----------HHHHHHHhhCCCCCCeEEEEECCCC
Confidence 467999999988864 589999999999999999999999994 2323333333 46899999999999
Q ss_pred HHHHHHHHHH-cCCCCeeEccccHHHhhhCCCCCC
Q 030104 149 RSMMAATDLL-NGFAGITDIAGGFAAWRQNGLPTE 182 (183)
Q Consensus 149 ~s~~a~~~L~-~G~~~v~~l~GG~~~W~~~g~pv~ 182 (183)
+|.++++.|+ .||++|++|+||+.+|.++|+|++
T Consensus 75 ~s~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~ 109 (539)
T 1yt8_A 75 LAPVAAQRLHDLGYSDVALLDGGLSGWRNAGGELF 109 (539)
T ss_dssp HHHHHHHHHHHTTCSSEEEETTHHHHHHHTTCCCB
T ss_pred hHHHHHHHHHHcCCCceEEeCCCHHHHHhcCCCcc
Confidence 9999999999 999999999999999999999985
No 50
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.82 E-value=3.3e-20 Score=157.22 Aligned_cols=111 Identities=18% Similarity=0.260 Sum_probs=95.7
Q ss_pred cccCHHHHHHHHh---------CCCEEEEcC--ChhhHhccCCCCceecCcccccC--CCCCCCHHHHHHHHhc--CCCC
Q 030104 73 TSVPVRVAHELLQ---------AGHRYLDVR--TPEEFSAGHATGAINVPYMYRVG--SGMTKNLKFVEEVSTR--FRKH 137 (183)
Q Consensus 73 ~~i~~~~~~~~~~---------~~~~lIDvR--~~~e~~~ghIpgAvnip~~~~~~--~~~~~~~~~~~~~~~~--l~~~ 137 (183)
..++++++.++++ .+++||||| ++.||..||||||+|+|+..+.. .+...+.+.++..+.. ++++
T Consensus 124 ~~i~~~~l~~~~~~~~~~~~~~~~~~liDvR~~~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~l~~~~~~~gi~~~ 203 (423)
T 2wlr_A 124 QLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWGAPKLYLISHIPGADYIDTNEVESEPLWNKVSDEQLKAMLAKHGIRHD 203 (423)
T ss_dssp GEECHHHHHHHHTTCCCTTCCSSCEEEEEEESSSCSHHHHCBCTTCEEEEGGGTEETTTTEECCHHHHHHHHHHTTCCTT
T ss_pred cccCHHHHHHHhhccccccccCCCeEEEEecCCCchhhccCcCCCcEEcCHHHhccCCCCCCCCHHHHHHHHHHcCCCCC
Confidence 5688899988886 248899999 99999999999999999976543 2455677777777754 6789
Q ss_pred CeEEEEcCCchHHHHHHHHHH-cCCCCeeEccccHHHhhhCCCCCCC
Q 030104 138 DEIIVGCQSGKRSMMAATDLL-NGFAGITDIAGGFAAWRQNGLPTEP 183 (183)
Q Consensus 138 ~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~GG~~~W~~~g~pv~~ 183 (183)
++||+||.+|.+|..+++.|+ .||++|++|+||+.+|...|+|+++
T Consensus 204 ~~ivvyC~~G~~a~~~~~~L~~~G~~~v~~l~Gg~~~W~~~g~pv~~ 250 (423)
T 2wlr_A 204 TTVILYGRDVYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVER 250 (423)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHHTCSCEEEETTTHHHHHHTTCCCBC
T ss_pred CeEEEECCCchHHHHHHHHHHHcCCCCeEEECCCHHHHhhCCCCccc
Confidence 999999999999999999999 9999999999999999999998863
No 51
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*
Probab=99.81 E-value=6.5e-21 Score=143.02 Aligned_cols=107 Identities=21% Similarity=0.301 Sum_probs=79.1
Q ss_pred CCCcccCHHHHHHHHhC--------CCEEEEcCChhhHhccCCCCceecCcccccCCCCCCCHHHHHHHHhcC-------
Q 030104 70 GVPTSVPVRVAHELLQA--------GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRF------- 134 (183)
Q Consensus 70 ~~~~~i~~~~~~~~~~~--------~~~lIDvR~~~e~~~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~~l------- 134 (183)
...+.|+++++.+++++ +++|||||+ .||..||||||+|||+..+.. ....+.++...+
T Consensus 28 ~~~~~Is~~eL~~~l~~~~~~~~~~~~~iIDVR~-~Ey~~GHIpGAiniP~~~l~~-----~~~~l~~l~~~~~~~~~~~ 101 (169)
T 3f4a_A 28 TNVKYLDPTELHRWMQEGHTTTLREPFQVVDVRG-SDYMGGHIKDGWHYAYSRLKQ-----DPEYLRELKHRLLEKQADG 101 (169)
T ss_dssp CSEEEECHHHHHHHHHHTSCTTTCCCEEEEECCS-TTCTTCEETTCEECCHHHHHH-----CHHHHHHHHHHHHHHHHTS
T ss_pred CCCcEeCHHHHHHHHhcCCccCcCCCEEEEECCc-hHHccCcCCCCEECCHHHhhc-----ccccHHHHHHHHHhhcccc
Confidence 45678999999998864 389999999 999999999999999953211 001122222211
Q ss_pred CCCCeEEEEcCCc-hHHHHHHHHHH--c---C--CCCeeEccccHHHhhhCCCCCC
Q 030104 135 RKHDEIIVGCQSG-KRSMMAATDLL--N---G--FAGITDIAGGFAAWRQNGLPTE 182 (183)
Q Consensus 135 ~~~~~ivv~c~~g-~~s~~a~~~L~--~---G--~~~v~~l~GG~~~W~~~g~pv~ 182 (183)
..+++|||||.+| .|+..++..|. + | +.+|++|+||+.+|.+++.+.+
T Consensus 102 ~~~~~IVvyC~sG~~Rs~~aa~~l~~~L~~~G~~~~~V~~L~GG~~aW~~~~~~~~ 157 (169)
T 3f4a_A 102 RGALNVIFHCMLSQQRGPSAAMLLLRSLDTAELSRCRLWVLRGGFSRWQSVYGDDE 157 (169)
T ss_dssp SSCEEEEEECSSSSSHHHHHHHHHHHTCCHHHHTTEEEEEETTHHHHHHHHHTTCT
T ss_pred cCCCeEEEEeCCCCCcHHHHHHHHHHHHHHcCCCCCCEEEECCCHHHHHHHcCCcc
Confidence 1237999999987 79988886664 2 5 5789999999999999877654
No 52
>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1
Probab=99.80 E-value=2.3e-20 Score=137.36 Aligned_cols=105 Identities=20% Similarity=0.169 Sum_probs=77.9
Q ss_pred CCcccCHHHHHHHHhC---CCEEEEcCChhhHhccCCCCceecCccccc----C-C-----CCCCCHHHHHHHHhcCCCC
Q 030104 71 VPTSVPVRVAHELLQA---GHRYLDVRTPEEFSAGHATGAINVPYMYRV----G-S-----GMTKNLKFVEEVSTRFRKH 137 (183)
Q Consensus 71 ~~~~i~~~~~~~~~~~---~~~lIDvR~~~e~~~ghIpgAvnip~~~~~----~-~-----~~~~~~~~~~~~~~~l~~~ 137 (183)
....|+++++.+++++ +++|||||++.||..||||||+|||+.... . . ...... .....+..++++
T Consensus 14 ~~~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHIpgAinip~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~ 92 (154)
T 1hzm_A 14 MAISKTVAWLNEQLELGNERLLLMDCRPQELYESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRG-EDRDRFTRRCGT 92 (154)
T ss_dssp CSSBSCCCCHHHHHHHCSSSCEEECCSTTHHHHHHTSSSCCCCCCSSHHHHTBCCSCCCTTTTSTTS-HHHHHHHHSTTS
T ss_pred cccccCHHHHHHHHhCCCCCEEEEEcCCHHHHhhccccCceEeCccHHHHhhhhcCcccHHHhCCCH-HHHHHHhccCCC
Confidence 3456778888877754 589999999999999999999999986532 0 1 122111 122334456788
Q ss_pred CeEEEEcCCchHH-------HHHHHHHH-c---CCCCeeEccccHHHhhhC
Q 030104 138 DEIIVGCQSGKRS-------MMAATDLL-N---GFAGITDIAGGFAAWRQN 177 (183)
Q Consensus 138 ~~ivv~c~~g~~s-------~~a~~~L~-~---G~~~v~~l~GG~~~W~~~ 177 (183)
++|||||.+|.++ ..+++.|+ + ||+ |++|+||+.+|.+.
T Consensus 93 ~~iVvyc~~g~~~~~~~~aa~~~~~~l~~l~~~G~~-v~~L~GG~~~W~~~ 142 (154)
T 1hzm_A 93 DTVVLYDESSSDWNENTGGESLLGLLLKKLKDEGCR-AFYLEGGFSKFQAE 142 (154)
T ss_dssp SCEEECCCSSSSSCSCSSCCSHHHHHHHHHHHTTCC-CEECCCCHHHHHHH
T ss_pred CeEEEEeCCCCccccccccchHHHHHHHHHHHCCCc-eEEEcChHHHHHHH
Confidence 8999999998865 34466666 6 998 99999999999875
No 53
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.80 E-value=1.7e-20 Score=156.71 Aligned_cols=97 Identities=18% Similarity=0.298 Sum_probs=80.4
Q ss_pred hCCCEEEEcCChhhHh-----------ccCCCCceecCccccc--C-CCC-CCCHHHHHHHHhcC----CC---CCeEEE
Q 030104 85 QAGHRYLDVRTPEEFS-----------AGHATGAINVPYMYRV--G-SGM-TKNLKFVEEVSTRF----RK---HDEIIV 142 (183)
Q Consensus 85 ~~~~~lIDvR~~~e~~-----------~ghIpgAvnip~~~~~--~-~~~-~~~~~~~~~~~~~l----~~---~~~ivv 142 (183)
+.+.+|||||++.||. .||||||+|||+..+. . .+. ..+.+.++..+..+ ++ +++||+
T Consensus 172 ~~~~~lIDvR~~~Ef~G~~~~~~~~~~~GhIpGAiniP~~~l~~~~~~~~~~~~~~~l~~~~~~~~~gi~~~~~d~~ivv 251 (373)
T 1okg_A 172 PPQAIITDARSADRFASTVRPYAADKMPGHIEGARNLPYTSHLVTRGDGKVLRSEEEIRHNIMTVVQGAGDAADLSSFVF 251 (373)
T ss_dssp CTTCCEEECSCHHHHTCCSSCCTTCSSSSCSTTCEECCGGGGEECCSSSCEECCHHHHHHHHHTTCC-----CCCTTSEE
T ss_pred ccCceEEeCCCHHHccccccccccCCcCccCCCcEEecHHHhhccCCCCCccCCHHHHHHHHHhhhcCCCcccCCCCEEE
Confidence 4558999999999999 9999999999997654 2 223 45667777777654 77 899999
Q ss_pred EcCCchHHHHHHHHHH-cCCCCeeEccccHHHhhh-CCCCC
Q 030104 143 GCQSGKRSMMAATDLL-NGFAGITDIAGGFAAWRQ-NGLPT 181 (183)
Q Consensus 143 ~c~~g~~s~~a~~~L~-~G~~~v~~l~GG~~~W~~-~g~pv 181 (183)
||++|.||..++..|. .||++|++|+|||.+|.. .++|+
T Consensus 252 yC~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~pv 292 (373)
T 1okg_A 252 SCGSGVTACINIALVHHLGLGHPYLYCGSWSEYSGLFRPPI 292 (373)
T ss_dssp ECSSSSTHHHHHHHHHHTTSCCCEECSSHHHHHHHHTHHHH
T ss_pred ECCchHHHHHHHHHHHHcCCCCeeEeCChHHHHhcCCCCCc
Confidence 9999999999999999 999999999999999987 56664
No 54
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.79 E-value=1.5e-19 Score=158.51 Aligned_cols=95 Identities=26% Similarity=0.532 Sum_probs=85.7
Q ss_pred CCCcccCHHHHHHHHhCCCEEEEcCChhhHhccCCCCceecCcccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCchH
Q 030104 70 GVPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKR 149 (183)
Q Consensus 70 ~~~~~i~~~~~~~~~~~~~~lIDvR~~~e~~~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~~ 149 (183)
.....|+++++.++++++++|||||++.||..||||||+|||+ +.+......++++++||+||.+|.|
T Consensus 486 ~~~~~i~~~~~~~~~~~~~~~iDvR~~~e~~~ghi~ga~~ip~------------~~l~~~~~~l~~~~~iv~~C~~g~r 553 (588)
T 3ics_A 486 GFVDTVQWHEIDRIVENGGYLIDVREPNELKQGMIKGSINIPL------------DELRDRLEEVPVDKDIYITCQLGMR 553 (588)
T ss_dssp TSCCEECTTTHHHHHHTTCEEEECSCGGGGGGCBCTTEEECCH------------HHHTTCGGGSCSSSCEEEECSSSHH
T ss_pred cccceecHHHHHHHhcCCCEEEEcCCHHHHhcCCCCCCEECCH------------HHHHHHHhhCCCCCeEEEECCCCcH
Confidence 3445688899999888889999999999999999999999999 5566666778899999999999999
Q ss_pred HHHHHHHHH-cCCCCeeEccccHHHhhhC
Q 030104 150 SMMAATDLL-NGFAGITDIAGGFAAWRQN 177 (183)
Q Consensus 150 s~~a~~~L~-~G~~~v~~l~GG~~~W~~~ 177 (183)
|..+++.|+ .||+ |++|+||+.+|.+.
T Consensus 554 s~~a~~~l~~~G~~-v~~l~GG~~~w~~~ 581 (588)
T 3ics_A 554 GYVAARMLMEKGYK-VKNVDGGFKLYGTV 581 (588)
T ss_dssp HHHHHHHHHHTTCC-EEEETTHHHHHHHH
T ss_pred HHHHHHHHHHcCCc-EEEEcchHHHHHhh
Confidence 999999999 9998 99999999999875
No 55
>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}
Probab=99.79 E-value=5.6e-19 Score=130.85 Aligned_cols=104 Identities=19% Similarity=0.263 Sum_probs=76.3
Q ss_pred CCCCcccCHHHHHHHHhC---------CCEEEEcCChhhHhccCCCCceecCccccc-----CCCCCCCHHHHHHHH---
Q 030104 69 VGVPTSVPVRVAHELLQA---------GHRYLDVRTPEEFSAGHATGAINVPYMYRV-----GSGMTKNLKFVEEVS--- 131 (183)
Q Consensus 69 ~~~~~~i~~~~~~~~~~~---------~~~lIDvR~~~e~~~ghIpgAvnip~~~~~-----~~~~~~~~~~~~~~~--- 131 (183)
......|+++++.+++++ +.+|||||++.||..||||||+|+|+..++ ..+... +....
T Consensus 7 ~~~~~~is~~el~~~l~~~~~~~~~~~~~~liDvR~~~e~~~ghI~ga~~i~~~~l~~~~~~~~~~~~----~~~~~~~~ 82 (158)
T 3tg1_B 7 LASIKIIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGAVHINCADKISRRRLQQGKIT----VLDLISCR 82 (158)
T ss_dssp ----CEECHHHHHHHHCC----------CEEEECSCHHHHHHCCBTTCEECCCSSHHHHHHHTTSSCC----HHHHTCCC
T ss_pred CCCCcEecHHHHHHHHHhcccccCCCCCEEEEEcCCHHHHHhCCCCCceeechhHHHHHhhhhcCccc----HHhhcCCH
Confidence 345678999999998873 489999999999999999999999996432 110000 00000
Q ss_pred ---hcC--CCCCeEEEEcCCc---------hHHHHHHHHHH-cCCCCeeEccccHHHhhhC
Q 030104 132 ---TRF--RKHDEIIVGCQSG---------KRSMMAATDLL-NGFAGITDIAGGFAAWRQN 177 (183)
Q Consensus 132 ---~~l--~~~~~ivv~c~~g---------~~s~~a~~~L~-~G~~~v~~l~GG~~~W~~~ 177 (183)
..+ .++++|||||.+| .++..+++.|. .|| +|++|+||+.+|.+.
T Consensus 83 ~~~~~~~~~~~~~IVvyc~~g~~~~~~~~~~~s~~a~~~L~~~G~-~v~~L~GG~~~W~~~ 142 (158)
T 3tg1_B 83 EGKDSFKRIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQN 142 (158)
T ss_dssp CSSCSSTTTTTSCEEEECSCCSCTTSCCSSSHHHHHHHHHHTTTC-CEEEETTHHHHHTSS
T ss_pred HHHHHHhccCCCeEEEEECCCCcccccCcchHHHHHHHHHHhCCC-cEEEeCCcHHHHHHH
Confidence 001 2478999999999 46889999999 999 799999999999765
No 56
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.78 E-value=9.1e-20 Score=158.79 Aligned_cols=91 Identities=27% Similarity=0.480 Sum_probs=77.9
Q ss_pred ccCHHHHHHHHhCCCEEEEcCChhhHhccCCCCceecCcccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCchHHHHH
Q 030104 74 SVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMMA 153 (183)
Q Consensus 74 ~i~~~~~~~~~~~~~~lIDvR~~~e~~~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~~s~~a 153 (183)
.|+++++.++ +++++|||||++.||..||||||+|+|+. .+......++++++||+||++|.||..+
T Consensus 474 ~i~~~~~~~~-~~~~~~iDvR~~~e~~~~~i~ga~~ip~~------------~l~~~~~~~~~~~~iv~~c~~g~rs~~a 540 (565)
T 3ntd_A 474 PIHFDQIDNL-SEDQLLLDVRNPGELQNGGLEGAVNIPVD------------ELRDRMHELPKDKEIIIFSQVGLRGNVA 540 (565)
T ss_dssp EECTTTTTSC-CTTEEEEECSCGGGGGGCCCTTCEECCGG------------GTTTSGGGSCTTSEEEEECSSSHHHHHH
T ss_pred eeeHHHHHhC-CCCcEEEEeCCHHHHhcCCCCCcEECCHH------------HHHHHHhhcCCcCeEEEEeCCchHHHHH
Confidence 4555555554 45689999999999999999999999994 3344455688999999999999999999
Q ss_pred HHHHH-cCCCCeeEccccHHHhhhCC
Q 030104 154 ATDLL-NGFAGITDIAGGFAAWRQNG 178 (183)
Q Consensus 154 ~~~L~-~G~~~v~~l~GG~~~W~~~g 178 (183)
++.|+ .|| +|++|+||+.+|.++|
T Consensus 541 ~~~l~~~G~-~v~~l~gG~~~w~~~g 565 (565)
T 3ntd_A 541 YRQLVNNGY-RARNLIGGYRTYKFAS 565 (565)
T ss_dssp HHHHHHTTC-CEEEETTHHHHHHHTC
T ss_pred HHHHHHcCC-CEEEEcChHHHHHhCc
Confidence 99999 999 9999999999999875
No 57
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.75 E-value=5.8e-18 Score=138.98 Aligned_cols=107 Identities=19% Similarity=0.357 Sum_probs=84.0
Q ss_pred ccCHHHHHHHHhCC-----CEEEEcCChhhHh-----------ccCCCCceecCcccccCCC---CCCCHHHHHHHH---
Q 030104 74 SVPVRVAHELLQAG-----HRYLDVRTPEEFS-----------AGHATGAINVPYMYRVGSG---MTKNLKFVEEVS--- 131 (183)
Q Consensus 74 ~i~~~~~~~~~~~~-----~~lIDvR~~~e~~-----------~ghIpgAvnip~~~~~~~~---~~~~~~~~~~~~--- 131 (183)
.++.+++.+.++++ ++|||+|++.+|. .||||||+|+|+...+... +....+.++..+
T Consensus 185 v~~~~~v~~~v~~~~~~~~~~lvDaRs~~rf~G~~~ep~~~~r~GHIPGA~nlP~~~~ld~~~~~~~~~~e~l~~~l~~~ 264 (327)
T 3utn_X 185 IVDYEEMFQLVKSGELAKKFNAFDARSLGRFEGTEPEPRSDIPSGHIPGTQPLPYGSLLDPETKTYPEAGEAIHATLEKA 264 (327)
T ss_dssp EECHHHHHHHHHTTCHHHHCEEEECSCHHHHHTSSCCSSSSCCCCBCTTEEECCGGGGSCTTTCCCCCTTHHHHHHHHHH
T ss_pred eecHHHHhhhhhcccccccceeeccCccceecccccCccccccCCCCCCCcccChhhccCCCCCCCCCcHHHHHHHHHHH
Confidence 46777887777653 7899999999996 5999999999998777432 222333333222
Q ss_pred -h----cCCCCCeEEEEcCCchHHHHHHHHHH-cCCCCeeEccccHHHhhhCCCC
Q 030104 132 -T----RFRKHDEIIVGCQSGKRSMMAATDLL-NGFAGITDIAGGFAAWRQNGLP 180 (183)
Q Consensus 132 -~----~l~~~~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~GG~~~W~~~g~p 180 (183)
. .++++++||+||.+|.+++..+..|. +||++|++|+|+|.+|.....|
T Consensus 265 ~~~~~~gid~~k~vI~yCgsGvtA~~~~laL~~lG~~~v~lYdGSWsEW~~r~~p 319 (327)
T 3utn_X 265 LKDFHCTLDPSKPTICSCGTGVSGVIIKTALELAGVPNVRLYDGSWTEWVLKSGP 319 (327)
T ss_dssp HHHTTCCCCTTSCEEEECSSSHHHHHHHHHHHHTTCCSEEEESSHHHHHHHHHCG
T ss_pred HHHhhcCCCCCCCEEEECChHHHHHHHHHHHHHcCCCCceeCCCcHHHhccccCC
Confidence 2 36788999999999999999999999 9999999999999999875444
No 58
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.73 E-value=1.3e-18 Score=149.24 Aligned_cols=121 Identities=17% Similarity=0.151 Sum_probs=95.2
Q ss_pred cCCccccccccccCCccc----cCCCCcccCHHHHHHHHhCCCEEEEcCChhhHhccCCCCceecCcccccCCCCCCCHH
Q 030104 50 SSKILSFCPKASLRGNLE----AVGVPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLK 125 (183)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~lIDvR~~~e~~~ghIpgAvnip~~~~~~~~~~~~~~ 125 (183)
.|.|+..+...|..+... ..+....|++++++++++++ +|||||++.+|..||||||+|+|+. ..
T Consensus 246 ~p~~~~~~~~~N~~G~~~~~~~~~~~~~~is~~~l~~~l~~~-~iiD~R~~~~y~~ghIpGA~~i~~~----------~~ 314 (474)
T 3tp9_A 246 APIYFARMKLVNKVGPRLLAELGAPERVDLPPERVRAWREGG-VVLDVRPADAFAKRHLAGSLNIPWN----------KS 314 (474)
T ss_dssp CCTTHHHHHHHHHHCCCCHHHHCCCEECCCCGGGHHHHHHTS-EEEECSCHHHHHHSEETTCEECCSS----------TT
T ss_pred CCccHHHHHhhhccCcccccccccCCCceeCHHHHHHHhCCC-EEEECCChHHHhccCCCCeEEECcc----------hH
Confidence 356666666666655322 24556789999999998887 9999999999999999999999984 13
Q ss_pred HHHHHHhcCCCCCeEEEEcCCchHHHHHHHHHH-cCCCCeeEccccHHHhhhCCCCCC
Q 030104 126 FVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLL-NGFAGITDIAGGFAAWRQNGLPTE 182 (183)
Q Consensus 126 ~~~~~~~~l~~~~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~GG~~~W~~~g~pv~ 182 (183)
+..+..+..+++++|||||+.|. +.++++.|+ +||++|+++.+|+.+|..++.++.
T Consensus 315 ~~~~~~~l~~~~~~vvvy~~~~~-~~~~~~~L~~~G~~~v~~~l~G~~~W~~~g~~~~ 371 (474)
T 3tp9_A 315 FVTWAGWLLPADRPIHLLAADAI-APDVIRALRSIGIDDVVDWTDPAAVDRAAPDDVA 371 (474)
T ss_dssp HHHHHHHHCCSSSCEEEECCTTT-HHHHHHHHHHTTCCCEEEEECGGGGTTCCGGGEE
T ss_pred HHHHHHhcCCCCCeEEEEECCCc-HHHHHHHHHHcCCcceEEecCcHHHHHhcccccc
Confidence 44444444578899999999887 556999999 999999987779999999887654
No 59
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.73 E-value=2.3e-17 Score=135.43 Aligned_cols=112 Identities=14% Similarity=0.108 Sum_probs=90.6
Q ss_pred CCCcccCHHHHHHHHhCC----CEEEEcC--------C-hhhH-hccCCCCceecCcccccC-----CCCCCCHHHHHHH
Q 030104 70 GVPTSVPVRVAHELLQAG----HRYLDVR--------T-PEEF-SAGHATGAINVPYMYRVG-----SGMTKNLKFVEEV 130 (183)
Q Consensus 70 ~~~~~i~~~~~~~~~~~~----~~lIDvR--------~-~~e~-~~ghIpgAvnip~~~~~~-----~~~~~~~~~~~~~ 130 (183)
+....||++++.++++.. +++||++ + ..|| +.||||||++++++.+-. .+++.+.+.+++.
T Consensus 25 ~~~~LIsp~~l~~ll~~~~~~rvv~lDasw~lP~~~r~~~~E~~~~~HIPGAv~~Dld~~~d~~~~~ph~LP~~~~f~~~ 104 (327)
T 3utn_X 25 PLFDLISPKAFVKLVASEKVHRIVPVDATWYLPSWKLDNKVDFLTKPRIPNSIFFDIDAISDKKSPYPHMFPTKKVFDDA 104 (327)
T ss_dssp CSCEEECHHHHHHHHHHCSSSCEEEEECCCCCGGGCCCHHHHHHHSCBCTTCEECCTTTSSCTTSSSTTCCCCHHHHHHH
T ss_pred ccccccCHHHHHHHHhCCCCCcEEEEEecCCCCCCCCCHHHHHHhhCcCCCCeeeChHHhcCCCCCCCCCCcCHHHHHHH
Confidence 344579999999988632 7889985 3 4566 789999999999875331 2456777777777
Q ss_pred Hhc--CCCCCeEEEEcCCch-HHHHHHHHHH-cCCCCeeEccccHHHhhhCCCCCC
Q 030104 131 STR--FRKHDEIIVGCQSGK-RSMMAATDLL-NGFAGITDIAGGFAAWRQNGLPTE 182 (183)
Q Consensus 131 ~~~--l~~~~~ivv~c~~g~-~s~~a~~~L~-~G~~~v~~l~GG~~~W~~~g~pv~ 182 (183)
+.. |+++++||||++.+. .+.+++|+|+ +|+++|++|+|| .+|.++|+|++
T Consensus 105 l~~lGI~~d~~VVvYD~~~~~~AaR~wW~Lr~~Gh~~V~vLdGg-~aW~~~g~p~~ 159 (327)
T 3utn_X 105 MSNLGVQKDDILVVYDRVGNFSSPRCAWTLGVMGHPKVYLLNNF-NQYREFKYPLD 159 (327)
T ss_dssp HHHTTCCTTCEEEEECSSSSSSHHHHHHHHHHTTCSEEEEESCH-HHHHHTTCCCB
T ss_pred HHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHHcCCCceeecccH-HHHHHhCCCcc
Confidence 766 789999999998765 6889999999 999999999987 89999999986
No 60
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.72 E-value=1.1e-17 Score=130.80 Aligned_cols=92 Identities=17% Similarity=0.117 Sum_probs=70.9
Q ss_pred CCCEEEEcCChhhHhccCCCCceecCcc--cccCC---CCCCCHHHHHHHHhcCCCCCeEEEEcCCch-HHHHHHHHHHc
Q 030104 86 AGHRYLDVRTPEEFSAGHATGAINVPYM--YRVGS---GMTKNLKFVEEVSTRFRKHDEIIVGCQSGK-RSMMAATDLLN 159 (183)
Q Consensus 86 ~~~~lIDvR~~~e~~~ghIpgAvnip~~--~~~~~---~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~-~s~~a~~~L~~ 159 (183)
++++|||||++.||..||||||+|+|+. .+... +...+.+.+...+..++.+++|||||++|. +|.++++.|++
T Consensus 5 ~~~~iiDvR~~~ey~~ghIpgAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivvyc~~g~~~s~~a~~~L~~ 84 (230)
T 2eg4_A 5 EDAVLVDTRPRPAYEAGHLPGARHLDLSAPKLRLREEAELKALEGGLTELFQTLGLRSPVVLYDEGLTSRLCRTAFFLGL 84 (230)
T ss_dssp TTCEEEECSCHHHHHHCBCTTCEECCCCSCCCCCCSHHHHHHHHHHHHHHHHHTTCCSSEEEECSSSCHHHHHHHHHHHH
T ss_pred CCEEEEECCChhhHhhCcCCCCEECCccchhcccCCCCCcCCCHHHHHHHHHhcCCCCEEEEEcCCCCccHHHHHHHHHc
Confidence 3589999999999999999999999985 32210 001112345555556666899999999998 89888888779
Q ss_pred CCCCeeEccccHHHhhhCCCCCC
Q 030104 160 GFAGITDIAGGFAAWRQNGLPTE 182 (183)
Q Consensus 160 G~~~v~~l~GG~~~W~~~g~pv~ 182 (183)
||++|++|+|| |.+ +|++
T Consensus 85 G~~~v~~l~GG---W~~--~p~~ 102 (230)
T 2eg4_A 85 GGLEVQLWTEG---WEP--YATE 102 (230)
T ss_dssp TTCCEEEECSS---CGG--GCCB
T ss_pred CCceEEEeCCC---Ccc--Cccc
Confidence 99999999999 976 6653
No 61
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.72 E-value=4.2e-19 Score=152.21 Aligned_cols=85 Identities=33% Similarity=0.493 Sum_probs=0.0
Q ss_pred HHHHHhC-CCEEEEcCChhhHhccCCCCceecCcccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCchHHHHHHHHHH
Q 030104 80 AHELLQA-GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLL 158 (183)
Q Consensus 80 ~~~~~~~-~~~lIDvR~~~e~~~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~~s~~a~~~L~ 158 (183)
+.+++++ +++|||||++.||..||||||+|+|+ ..+...+..++++++||+||.+|.||..+++.|+
T Consensus 379 ~~~~~~~~~~~liDvR~~~e~~~ghIpgA~~ip~------------~~l~~~~~~l~~~~~iv~~C~~G~rs~~a~~~L~ 446 (466)
T 3r2u_A 379 HSEDITGNESHILDVRNDNEWNNGHLSQAVHVPH------------GKLLETDLPFNKNDVIYVHCQSGIRSSIAIGILE 446 (466)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHhCCCcEEEEeCCHHHHhcCcCCCCEECCH------------HHHHHHHhhCCCCCeEEEECCCChHHHHHHHHHH
Confidence 3444433 48899999999999999999999999 3445555668889999999999999999999999
Q ss_pred -cCCCCeeEccccHHHhhh
Q 030104 159 -NGFAGITDIAGGFAAWRQ 176 (183)
Q Consensus 159 -~G~~~v~~l~GG~~~W~~ 176 (183)
.||++|++|+||+.+|.+
T Consensus 447 ~~G~~~v~~l~GG~~~W~~ 465 (466)
T 3r2u_A 447 HKGYHNIINVNEGYKDIQL 465 (466)
T ss_dssp -------------------
T ss_pred HcCCCCEEEecChHHHHhh
Confidence 999999999999999975
No 62
>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4
Probab=99.71 E-value=2.2e-17 Score=122.27 Aligned_cols=110 Identities=10% Similarity=0.097 Sum_probs=72.5
Q ss_pred CCCcccCHHHHHHHHhC---CCEEEEcCChhhHhccCCCCceecCcccccCCCCC------CCHHHHHHHHhcCCCCCeE
Q 030104 70 GVPTSVPVRVAHELLQA---GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMT------KNLKFVEEVSTRFRKHDEI 140 (183)
Q Consensus 70 ~~~~~i~~~~~~~~~~~---~~~lIDvR~~~e~~~ghIpgAvnip~~~~~~~~~~------~~~~~~~~~~~~l~~~~~i 140 (183)
.....|+++++.+++++ +++|||||++.||..||||||+|||+..+. .+.. ..++.....+....+...|
T Consensus 17 ~~~~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~gAinip~~~l~-~~~~~~~l~~~lp~~~~~l~~~~~~~~~V 95 (157)
T 2gwf_A 17 RGSGAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHSLSVPEEAIS-PGVTASWIEAHLPDDSKDTWKKRGNVEYV 95 (157)
T ss_dssp --CCEECHHHHHHHHHSTTSCEEEEECSCHHHHHHSCBTTCEECCGGGCC-TTCCHHHHHHTSCHHHHHHHHTTTTSSEE
T ss_pred CCCCccCHHHHHHHHhcCCCCeEEEECCCHHHHHhcCccCCcccCHHHcC-CCCcHHHHHHHcCHHHHHHHHhcCCCCEE
Confidence 44567999999988864 589999999999999999999999986332 1110 0011112222333344569
Q ss_pred EEEcCCchH----HHHHHHHHH-----c----CCC-CeeEccccHHHhhhCCCCC
Q 030104 141 IVGCQSGKR----SMMAATDLL-----N----GFA-GITDIAGGFAAWRQNGLPT 181 (183)
Q Consensus 141 vv~c~~g~~----s~~a~~~L~-----~----G~~-~v~~l~GG~~~W~~~g~pv 181 (183)
|+||.++.+ +..+++.|. . ||. +|++|+||+.+|.+. +|.
T Consensus 96 Vvy~~~~~~~~~~a~~~l~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~ 149 (157)
T 2gwf_A 96 VLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQ 149 (157)
T ss_dssp EEECSSCCGGGCCTTCHHHHHHHHHHTSCCSSCCSSCCEEETTHHHHHHHH-CGG
T ss_pred EEEcCCCCccccCcccHHHHHHHHHHhhccccccCCceEEEccHHHHHHHH-Chh
Confidence 999987753 233444433 2 454 399999999999874 654
No 63
>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4
Probab=99.71 E-value=2.5e-17 Score=121.80 Aligned_cols=109 Identities=9% Similarity=0.150 Sum_probs=74.1
Q ss_pred CCCCcccCHHHHHHHHhC---CCEEEEcCChhhHhccCCCCceecCcccccCCCCCCCHHHH--------HHHHhcCCCC
Q 030104 69 VGVPTSVPVRVAHELLQA---GHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFV--------EEVSTRFRKH 137 (183)
Q Consensus 69 ~~~~~~i~~~~~~~~~~~---~~~lIDvR~~~e~~~ghIpgAvnip~~~~~~~~~~~~~~~~--------~~~~~~l~~~ 137 (183)
.+....|+++++.+++++ +++|||||++.||..||||||+|||+..+. .+. ....+ ...+......
T Consensus 11 ~~~~~~i~~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~gainip~~~~~-~~~--~~~~l~~~lp~~~~~~~~~~~~~ 87 (157)
T 1whb_A 11 TKEKGAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHSLSVPEEAIS-PGV--TASWIEAHLPDDSKDTWKKRGNV 87 (157)
T ss_dssp CCCCSEECHHHHHHHHTCSSSCEEEEEESCHHHHHHCCBTTCEEECSSSCC-TTC--CHHHHHHSCCTTHHHHHHGGGTS
T ss_pred cccCCccCHHHHHHHHhcCCCCeEEEECCCHHHHHhccccCCcccCHHHcc-CCC--cHHHHHHHCChHHHHHHHhcCCC
Confidence 455678999999998864 579999999999999999999999986321 110 00111 1222222233
Q ss_pred CeEEEEcCCchH----HHHHHHHHH-c--------CCC-CeeEccccHHHhhhCCCCC
Q 030104 138 DEIIVGCQSGKR----SMMAATDLL-N--------GFA-GITDIAGGFAAWRQNGLPT 181 (183)
Q Consensus 138 ~~ivv~c~~g~~----s~~a~~~L~-~--------G~~-~v~~l~GG~~~W~~~g~pv 181 (183)
..||+||.++.+ +..+++.|. . ||. +|++|+||+.+|.+. +|.
T Consensus 88 ~~VVvy~~~~~~~~~~a~~~~~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~ 144 (157)
T 1whb_A 88 EYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQ 144 (157)
T ss_dssp SEEEEECSSCCGGGCCTTCHHHHHHHTTTTTCSSCCCSSCCEEESSCHHHHHHH-CGG
T ss_pred CEEEEECCCCCccccccccHHHHHHHHHHHhccccccCCCeEEEcchHHHHHHH-Chh
Confidence 459999987753 344555554 2 454 399999999999874 654
No 64
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.45 E-value=9.6e-14 Score=118.88 Aligned_cols=80 Identities=21% Similarity=0.302 Sum_probs=62.8
Q ss_pred hCCCEEEEcCChhhHhccCCCCceecCcccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCchHHHHHHHHHH-cCCCC
Q 030104 85 QAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLL-NGFAG 163 (183)
Q Consensus 85 ~~~~~lIDvR~~~e~~~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~~s~~a~~~L~-~G~~~ 163 (183)
+++++|||+|++.+|..||||||+|+|+. ..+..+....++++++||+||+ +.++.++++.|+ +||++
T Consensus 294 ~~~~~ilD~R~~~~y~~gHIpGAv~ip~~----------~~~~~~~~~~~~~~~~vvly~~-~~~a~~a~~~L~~~G~~~ 362 (466)
T 3r2u_A 294 NTNRLTFDLRSKEAYHGGHIEGTINIPYD----------KNFINQIGWYLNYDQEINLIGD-YHLVSKATHTLQLIGYDD 362 (466)
T ss_dssp CCCSEEEECSCHHHHHHSCCTTCEECCSS----------TTHHHHHTTTCCTTSCEEEESC-HHHHHHHHHHHHTTTCCC
T ss_pred CCCeEEEECCCHHHHhhCCCCCcEECCcc----------HHHHHHHHhccCCCCeEEEEEC-CchHHHHHHHhhhhhccc
Confidence 46699999999999999999999999984 1344444444688899999999 568899999999 99999
Q ss_pred eeE-ccccHHHhh
Q 030104 164 ITD-IAGGFAAWR 175 (183)
Q Consensus 164 v~~-l~GG~~~W~ 175 (183)
|+. ++|+...|.
T Consensus 363 v~~~l~g~~~~~~ 375 (466)
T 3r2u_A 363 IAGYQLPQSKIQT 375 (466)
T ss_dssp EEEEECCC-----
T ss_pred ccccccCcccccH
Confidence 986 677665543
No 65
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=98.28 E-value=2.5e-06 Score=62.22 Aligned_cols=83 Identities=18% Similarity=0.196 Sum_probs=53.8
Q ss_pred cCHHHHHHHHhCC-CEEEEcCChhh------------Hhcc-CCCCceecCcccccCCCCCCCHHHHHHHHhcC-CCCCe
Q 030104 75 VPVRVAHELLQAG-HRYLDVRTPEE------------FSAG-HATGAINVPYMYRVGSGMTKNLKFVEEVSTRF-RKHDE 139 (183)
Q Consensus 75 i~~~~~~~~~~~~-~~lIDvR~~~e------------~~~g-hIpgAvnip~~~~~~~~~~~~~~~~~~~~~~l-~~~~~ 139 (183)
++++++..+.+.+ ..|||+|++.| |... +|.|.+|+|+... ....+.+......+ ..+.+
T Consensus 30 ~~~~d~~~L~~~Gi~~IIdlR~~~E~~~~p~~~~~~~~~~~~gi~~~~~iPv~~~-----~~~~~~~~~~~~~l~~~~~p 104 (156)
T 2f46_A 30 LTKADAEQIAQLGIKTIICNRPDREEESQPDFAQIKQWLEQAGVTGFHHQPVTAR-----DIQKHDVETFRQLIGQAEYP 104 (156)
T ss_dssp CCGGGHHHHHHHTCCEEEECSCTTSSTTCCCHHHHHHHHGGGTCCEEEECCCCTT-----TCCHHHHHHHHHHHHTSCSS
T ss_pred CCHHHHHHHHHCCCCEEEECCCCccccCCCcHHHHHHHHHHCCCHhheECccCCC-----CCCHHHHHHHHHHHHhCCCC
Confidence 4556666666656 78999997665 3334 5999999998521 12234444444333 24789
Q ss_pred EEEEcCCchHHHHHHHHHH--cCCC
Q 030104 140 IIVGCQSGKRSMMAATDLL--NGFA 162 (183)
Q Consensus 140 ivv~c~~g~~s~~a~~~L~--~G~~ 162 (183)
|+|+|.+|.|+..++..+. .|.+
T Consensus 105 VlvHC~sG~Rs~~l~al~l~~~g~~ 129 (156)
T 2f46_A 105 VLAYCRTGTRCSLLWGFRRAAEGMP 129 (156)
T ss_dssp EEEECSSSHHHHHHHHHHHHHTTCC
T ss_pred EEEECCCCCCHHHHHHHHHHHcCCC
Confidence 9999999999875544433 6764
No 66
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=95.54 E-value=0.024 Score=39.93 Aligned_cols=82 Identities=13% Similarity=0.081 Sum_probs=48.2
Q ss_pred HHHHHHHHhCC-CEEEEcCChhhHhccCCCC--ceecCcccccCCCCCCCHHHHHHHHhc----CCCCCeEEEEcCCch-
Q 030104 77 VRVAHELLQAG-HRYLDVRTPEEFSAGHATG--AINVPYMYRVGSGMTKNLKFVEEVSTR----FRKHDEIIVGCQSGK- 148 (183)
Q Consensus 77 ~~~~~~~~~~~-~~lIDvR~~~e~~~ghIpg--Avnip~~~~~~~~~~~~~~~~~~~~~~----l~~~~~ivv~c~~g~- 148 (183)
.+++..+.+.+ ..|||+|+..+......+| -+++|+.+. ...+.+.+...... +..+.+|+|.|..|.
T Consensus 25 ~~~~~~L~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~~~~d~----~~~~~~~~~~~~~~i~~~~~~~~~vlVHC~~G~~ 100 (150)
T 4erc_A 25 PAHYQFLLDLGVRHLVSLTERGPPHSDSCPGLTLHRLRIPDF----CPPAPDQIDRFVQIVDEANARGEAVGVHCALGFG 100 (150)
T ss_dssp HHHHHHHHHTTEEEEEECSSSCCTTGGGCTTSEEEECCCCTT----SCCCHHHHHHHHHHHHHHHHTTCEEEEECSSSSH
T ss_pred HHHHHHHHHCCCCEEEEcCCCCCCcccccCCceEEEEecCCC----CCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCC
Confidence 56666666667 7899999976654444444 345666422 12223333333332 345689999999987
Q ss_pred HHHH-HH-HHHH-cCCC
Q 030104 149 RSMM-AA-TDLL-NGFA 162 (183)
Q Consensus 149 ~s~~-a~-~~L~-~G~~ 162 (183)
|+.. ++ ..+. .|++
T Consensus 101 Rsg~~~a~~l~~~~~~~ 117 (150)
T 4erc_A 101 RTGTMLACYLVKERGLA 117 (150)
T ss_dssp HHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHcCCC
Confidence 7763 33 2344 6763
No 67
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=94.63 E-value=0.063 Score=37.62 Aligned_cols=83 Identities=13% Similarity=0.093 Sum_probs=47.2
Q ss_pred CHHHHHHHHhCC-CEEEEcCChhhHhccCCCC--ceecCcccccCCCCCCCHHHHHHHHhc----CCCCCeEEEEcCCch
Q 030104 76 PVRVAHELLQAG-HRYLDVRTPEEFSAGHATG--AINVPYMYRVGSGMTKNLKFVEEVSTR----FRKHDEIIVGCQSGK 148 (183)
Q Consensus 76 ~~~~~~~~~~~~-~~lIDvR~~~e~~~ghIpg--Avnip~~~~~~~~~~~~~~~~~~~~~~----l~~~~~ivv~c~~g~ 148 (183)
+.++...+.+.+ ..|||+|+..|+....+++ -+++|+.+. ...+.+.+...... +..+.+|+|.|..|.
T Consensus 25 ~~~~~~~l~~~gi~~Vv~l~~~~e~~~~~~~~~~~~~~~~~d~----~~p~~~~~~~~~~~i~~~~~~~~~vlVHC~aG~ 100 (151)
T 2img_A 25 LPAHYQFLLDLGVRHLVSLTERGPPHSDSCPGLTLHRLRIPDF----CPPAPDQIDRFVQIVDEANARGEAVGVHCALGF 100 (151)
T ss_dssp SHHHHHHHHHTTEEEEEECSSSCCTTGGGCTTSEEEECCCCTT----CCCCHHHHHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cHHHHHHHHHCCCCEEEECCCCCCCCHHHHhhCCeEEEeCCCC----CCCCHHHHHHHHHHHHHHHhCCCcEEEECCCCC
Confidence 456666666667 7899999876654333332 456666422 11223333333222 345789999999886
Q ss_pred -HHHHHH-HHHH--cCCC
Q 030104 149 -RSMMAA-TDLL--NGFA 162 (183)
Q Consensus 149 -~s~~a~-~~L~--~G~~ 162 (183)
|+..++ ..|. .|++
T Consensus 101 ~Rsg~~~~~~l~~~~~~~ 118 (151)
T 2img_A 101 GRTGTMLACYLVKERGLA 118 (151)
T ss_dssp SHHHHHHHHHHHHHHCCC
T ss_pred ChHHHHHHHHHHHHhCcC
Confidence 766433 3333 3763
No 68
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A
Probab=93.72 E-value=0.14 Score=36.07 Aligned_cols=84 Identities=8% Similarity=-0.015 Sum_probs=45.3
Q ss_pred HHHHHHHhCC-CEEEEcCChhhHhc-------cCCCCceecCcccccCCCCCCCHHHHHHHHhcC-C-CCCeEEEEcCCc
Q 030104 78 RVAHELLQAG-HRYLDVRTPEEFSA-------GHATGAINVPYMYRVGSGMTKNLKFVEEVSTRF-R-KHDEIIVGCQSG 147 (183)
Q Consensus 78 ~~~~~~~~~~-~~lIDvR~~~e~~~-------ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~~l-~-~~~~ivv~c~~g 147 (183)
+++..+.+.+ ..|||+|+..+... ..| .-+++|+.+...+......+.+.+.+..+ + .+.+|+|+|..|
T Consensus 24 ~d~~~L~~~gi~~Vi~l~~~~e~~~~~~~~~~~gi-~~~~ipi~d~~~~~~~~~~~~~~~~~~~i~~~~~~~vlvHC~aG 102 (151)
T 1xri_A 24 ANFSFLQTLGLRSIIYLCPEPYPESNLQFLKSNGI-RLFQFGIEGNKEPFVNIPDHKIRMALKVLLDEKNHPVLIHCKRG 102 (151)
T ss_dssp HHHHHHHHHTCSEEEECCSSCCCHHHHHHHHHHTC-EEEECCCCCCCGGGCCCCHHHHHHHHHHHHCGGGCSEEEECSSS
T ss_pred cCHHHHHHCCCCEEEECCCCCcChhHHHHHHhcCC-eEEecccccccCccccCCHHHHHHHHHHHHcCCCCCEEEECCCC
Confidence 4444444446 78999998655321 112 13567764321111112334444444432 2 467999999999
Q ss_pred h-HHHHHHH-HHH-cCCC
Q 030104 148 K-RSMMAAT-DLL-NGFA 162 (183)
Q Consensus 148 ~-~s~~a~~-~L~-~G~~ 162 (183)
. |+..++. .|. .|+.
T Consensus 103 ~~RTg~~~a~~l~~~g~~ 120 (151)
T 1xri_A 103 KHRTGCLVGCLRKLQKWC 120 (151)
T ss_dssp SSHHHHHHHHHHHHTTBC
T ss_pred CCHHHHHHHHHHHHhCCC
Confidence 6 7775443 344 7764
No 69
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=93.21 E-value=0.26 Score=34.35 Aligned_cols=81 Identities=17% Similarity=0.085 Sum_probs=41.7
Q ss_pred HHHHhCC-CEEEEcCChhhH-hccCCCCceecCcccccCCCCCCCHHHHHHHHh-cCCCCCeEEEEcCCch-HHHH--HH
Q 030104 81 HELLQAG-HRYLDVRTPEEF-SAGHATGAINVPYMYRVGSGMTKNLKFVEEVST-RFRKHDEIIVGCQSGK-RSMM--AA 154 (183)
Q Consensus 81 ~~~~~~~-~~lIDvR~~~e~-~~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~-~l~~~~~ivv~c~~g~-~s~~--a~ 154 (183)
..+.+.+ ..|||+++.... ....+ .-+++|+.+.........-...-+.+. ....+.+|+|.|..|. ||.. ++
T Consensus 23 ~~L~~~gI~~Vi~l~~~~~~~~~~~~-~~~~ip~~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~~G~~RS~~~~~a 101 (144)
T 3ezz_A 23 DMLDALGITALLNVSSDCPNHFEGHY-QYKCIPVEDNHKADISSWFMEAIEYIDAVKDCRGRVLVHSQAGISRSATICLA 101 (144)
T ss_dssp HHHHHTTCCEEEECSSSCCCTTTTTS-EEEECCCCSSSSCCTTTTHHHHHHHHHHHHHTTCCEEEEESSSSSHHHHHHHH
T ss_pred HHHHHCCCeEEEEccCCCCccCCCCc-eEEEEEcccCCCCChHHHHHHHHHHHHHHHhcCCeEEEECCCCCChhHHHHHH
Confidence 3344456 789999974321 11111 235677654332232222222222222 2345689999999986 7663 34
Q ss_pred HHHH-cCCC
Q 030104 155 TDLL-NGFA 162 (183)
Q Consensus 155 ~~L~-~G~~ 162 (183)
..+. .|++
T Consensus 102 ylm~~~~~~ 110 (144)
T 3ezz_A 102 YLMMKKRVR 110 (144)
T ss_dssp HHHHHHTCC
T ss_pred HHHHHcCCC
Confidence 4444 6663
No 70
>1v8c_A MOAD related protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, protein binding; 1.60A {Thermus thermophilus} SCOP: d.15.3.1 d.129.5.1
Probab=93.19 E-value=0.012 Score=43.30 Aligned_cols=22 Identities=18% Similarity=0.451 Sum_probs=20.2
Q ss_pred CEEEEcCChhhHhccCCCCceecCcc
Q 030104 88 HRYLDVRTPEEFSAGHATGAINVPYM 113 (183)
Q Consensus 88 ~~lIDvR~~~e~~~ghIpgAvnip~~ 113 (183)
.++||||++.||. |||+|||..
T Consensus 122 ~~liDvRe~~E~~----pgA~~iprg 143 (168)
T 1v8c_A 122 GAVVRFREVEPLK----VGSLSIPQL 143 (168)
T ss_dssp TEEEEEEEEEEEE----ETTEEEEEE
T ss_pred eEEEECCChhhcC----CCCEEcChh
Confidence 3899999999999 999999974
No 71
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=93.07 E-value=0.14 Score=35.94 Aligned_cols=80 Identities=16% Similarity=0.172 Sum_probs=41.7
Q ss_pred HHHHHhCC-CEEEEcCChhhHhccCCCC---ceecCcccccCCCCCCC-HHHHHHHHhcCCCCCeEEEEcCCc-hHHHH-
Q 030104 80 AHELLQAG-HRYLDVRTPEEFSAGHATG---AINVPYMYRVGSGMTKN-LKFVEEVSTRFRKHDEIIVGCQSG-KRSMM- 152 (183)
Q Consensus 80 ~~~~~~~~-~~lIDvR~~~e~~~ghIpg---Avnip~~~~~~~~~~~~-~~~~~~~~~~l~~~~~ivv~c~~g-~~s~~- 152 (183)
...+.+.+ ..|||++++.+ ...++ -+++|+.+.-....... .+.++.....+..+.+|+|+|..| .||..
T Consensus 22 ~~~L~~~gi~~Vi~l~~~~~---~~~~~~~~~~~ipi~D~~~~~l~~~~~~~~~fi~~~~~~~~~VlVHC~~G~~RS~~~ 98 (145)
T 2nt2_A 22 LEDLQNRGVRYILNVTREID---NFFPGVFEYHNIRVYDEEATDLLAYWNDTYKFISKAKKHGSKCLVHSKMGVSRSAST 98 (145)
T ss_dssp HHHHHHTTEEEEEECCSSSC---CSCBTTBEEEECCCCSSTTCCCGGGHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHH
T ss_pred HHHHHHCCCCEEEEeCCCCc---cCCCCCcEEEEEEEeCCCCCcHHHHHHHHHHHHHHHHHcCCeEEEECCCCCchHHHH
Confidence 34444566 67999997543 11232 25677643221111111 111111212234568999999999 58763
Q ss_pred -HHHHHH-cCCC
Q 030104 153 -AATDLL-NGFA 162 (183)
Q Consensus 153 -a~~~L~-~G~~ 162 (183)
++..+. .|++
T Consensus 99 v~ayLm~~~~~~ 110 (145)
T 2nt2_A 99 VIAYAMKEYGWN 110 (145)
T ss_dssp HHHHHHHHHCCC
T ss_pred HHHHHHHHhCCC
Confidence 345555 7763
No 72
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=91.72 E-value=0.28 Score=34.92 Aligned_cols=79 Identities=11% Similarity=0.125 Sum_probs=39.9
Q ss_pred HHHHhCC-CEEEEcCChhhHhccCCCC--ceecCcccccCCCCCCC-HHHHHHHHhcCCCCCeEEEEcCCc-hHHHH--H
Q 030104 81 HELLQAG-HRYLDVRTPEEFSAGHATG--AINVPYMYRVGSGMTKN-LKFVEEVSTRFRKHDEIIVGCQSG-KRSMM--A 153 (183)
Q Consensus 81 ~~~~~~~-~~lIDvR~~~e~~~ghIpg--Avnip~~~~~~~~~~~~-~~~~~~~~~~l~~~~~ivv~c~~g-~~s~~--a 153 (183)
..+.+.+ ..|||+|+..+.. ..| -+++|+.+......... .+.++.....+..+.+|+|+|..| .|+.. +
T Consensus 27 ~~L~~~gI~~Vi~l~~~~~~~---~~~i~~~~ipi~D~~~~~~~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~~~ 103 (160)
T 1yz4_A 27 DQLGRNKITHIISIHESPQPL---LQDITYLRIPVADTPEVPIKKHFKECINFIHCCRLNGGNCLVHSFAGISRSTTIVT 103 (160)
T ss_dssp HHHHHTTCCEEEEECSSCCCC---CTTCEEEEECCCSCTTSCGGGGHHHHHHHHHHHHHTTCCEEEEETTSSSHHHHHHH
T ss_pred HHHHHCCCeEEEEccCCCCCc---cCCCeEEEEECCCCCCccHHHHHHHHHHHHHHHHHcCCeEEEECCCCCchHHHHHH
Confidence 3333456 6899999764321 122 25666643221111111 111111111223568999999999 58763 3
Q ss_pred HHHHH-cCCC
Q 030104 154 ATDLL-NGFA 162 (183)
Q Consensus 154 ~~~L~-~G~~ 162 (183)
+..+. .|++
T Consensus 104 aylm~~~~~~ 113 (160)
T 1yz4_A 104 AYVMTVTGLG 113 (160)
T ss_dssp HHHHHHHCCC
T ss_pred HHHHHHcCCC
Confidence 44445 6764
No 73
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=91.63 E-value=0.21 Score=35.80 Aligned_cols=77 Identities=23% Similarity=0.334 Sum_probs=40.4
Q ss_pred HHHHhCC-CEEEEcCChhhHhccCCCC--ceecCcccccCCCCCCCHHHHHHHHh----cCCCCCeEEEEcCCc-hHHHH
Q 030104 81 HELLQAG-HRYLDVRTPEEFSAGHATG--AINVPYMYRVGSGMTKNLKFVEEVST----RFRKHDEIIVGCQSG-KRSMM 152 (183)
Q Consensus 81 ~~~~~~~-~~lIDvR~~~e~~~ghIpg--Avnip~~~~~~~~~~~~~~~~~~~~~----~l~~~~~ivv~c~~g-~~s~~ 152 (183)
..+.+.+ ..|||+|+..+.. ...| -+++|+.+.-... ..+.+....+ .+..+.+|+|+|..| .|+..
T Consensus 31 ~~L~~~gI~~Vi~l~~~~~~~--~~~~~~~~~ip~~D~~~~~---~~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~ 105 (164)
T 2hcm_A 31 ELLVRAGITLCVNVSRQQPGP--RAPGVAELRVPVFDDPAED---LLTHLEPTCAAMEAAVRDGGSCLVYCKNGRSRSAA 105 (164)
T ss_dssp HHHHHTTEEEEEECSSSCCCC--CCTTCEEEECCCCSCTTSC---CHHHHHHHHHHHHHHHHTTCEEEEEESSSSHHHHH
T ss_pred HHHHHCCCeEEEEcCCCCCCC--CCCCCEEEEEeCcCCCCch---HHHHHHHHHHHHHHHHHcCCEEEEECCCCCchHHH
Confidence 3344456 6899999865421 1122 3566664221111 1112222211 234578999999999 57773
Q ss_pred H--HHHHH-cCCC
Q 030104 153 A--ATDLL-NGFA 162 (183)
Q Consensus 153 a--~~~L~-~G~~ 162 (183)
+ +..+. .|++
T Consensus 106 ~~~ayLm~~~~~~ 118 (164)
T 2hcm_A 106 VCTAYLMRHRGHS 118 (164)
T ss_dssp HHHHHHHHHSCCC
T ss_pred HHHHHHHHHhCCC
Confidence 3 44555 7764
No 74
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A*
Probab=91.57 E-value=0.39 Score=35.95 Aligned_cols=74 Identities=18% Similarity=0.192 Sum_probs=40.6
Q ss_pred CHHHHHHHHhCC-CEEEEcCChhhHhccCCC---------C--ceecCcccccCCCCCCCHHHHHHHHhc----CCCCCe
Q 030104 76 PVRVAHELLQAG-HRYLDVRTPEEFSAGHAT---------G--AINVPYMYRVGSGMTKNLKFVEEVSTR----FRKHDE 139 (183)
Q Consensus 76 ~~~~~~~~~~~~-~~lIDvR~~~e~~~ghIp---------g--Avnip~~~~~~~~~~~~~~~~~~~~~~----l~~~~~ 139 (183)
..+++..+.+.+ ..|||+|+..|.....++ | -+++|+.+. ...+.+.+...... +..+.+
T Consensus 60 ~~~d~~~L~~~gi~~Vv~l~~~~E~~~~~~~~~~~~~~~~gi~~~~~pi~d~----~~p~~~~~~~~~~~i~~~~~~~~~ 135 (212)
T 1fpz_A 60 VQKDTEELKSCGIQDIFVFCTRGELSKYRVPNLLDLYQQCGIITHHHPIADG----GTPDIASCCEIMEELTTCLKNYRK 135 (212)
T ss_dssp HHHHHHHHHHHTCCEEEECCCHHHHHHTTCTTHHHHHHHTTCEEEECCCCTT----CCCCHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHCCCCEEEEcCCHHHHHhcCCccHHHHHHHcCCEEEEecCCCC----CCCCHHHHHHHHHHHHHHHhCCCC
Confidence 345556565556 789999998665432211 2 245565321 11122223322222 345789
Q ss_pred EEEEcCCch-HHHHH
Q 030104 140 IIVGCQSGK-RSMMA 153 (183)
Q Consensus 140 ivv~c~~g~-~s~~a 153 (183)
|+|.|..|. |+..+
T Consensus 136 VlVHC~aG~gRTg~~ 150 (212)
T 1fpz_A 136 TLIHSYGGLGRSCLV 150 (212)
T ss_dssp EEEECSSSSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 999999886 76643
No 75
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=90.90 E-value=0.42 Score=33.34 Aligned_cols=80 Identities=13% Similarity=0.089 Sum_probs=39.9
Q ss_pred HHHHhCC-CEEEEcCChhhHhccCCCC--ceecCcccccCCCCCCC-HHHHHHHHhcCCCCCeEEEEcCCch-HHHH--H
Q 030104 81 HELLQAG-HRYLDVRTPEEFSAGHATG--AINVPYMYRVGSGMTKN-LKFVEEVSTRFRKHDEIIVGCQSGK-RSMM--A 153 (183)
Q Consensus 81 ~~~~~~~-~~lIDvR~~~e~~~ghIpg--Avnip~~~~~~~~~~~~-~~~~~~~~~~l~~~~~ivv~c~~g~-~s~~--a 153 (183)
..+.+.+ ..||+++...+ .....| -+++|+.+......... .+.++.....+..+.+|+|.|..|. ||.. +
T Consensus 23 ~~L~~~gI~~Vl~l~~~~~--~~~~~~~~~~~ipi~D~~~~~~~~~~~~~~~fi~~~~~~~~~VlVHC~~G~sRS~~~v~ 100 (144)
T 3s4e_A 23 DTLKKNKVTHILNVAYGVE--NAFLSDFTYKSISILDLPETNILSYFPECFEFIEEAKRKDGVVLVHSNAGVSRAAAIVI 100 (144)
T ss_dssp HHHHHTTCCEEEECSSSCC--CCCTTTSEEEECCCCCCTTSCGGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHHH
T ss_pred HHHHHcCCCEEEEccCCCC--CCCCCCCEEEEEeccCCCCCchHHHHHHHHHHHHHHHHcCCeEEEEcCCCCchHHHHHH
Confidence 3344456 68999986332 111112 35667643222221111 1112222222345679999999987 7653 3
Q ss_pred HHHHH-cCCC
Q 030104 154 ATDLL-NGFA 162 (183)
Q Consensus 154 ~~~L~-~G~~ 162 (183)
+..+. .|++
T Consensus 101 ayLm~~~~~~ 110 (144)
T 3s4e_A 101 GFLMNSEQTS 110 (144)
T ss_dssp HHHHHHHCCC
T ss_pred HHHHHHcCCC
Confidence 44444 6663
No 76
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=90.88 E-value=0.43 Score=34.21 Aligned_cols=81 Identities=15% Similarity=0.192 Sum_probs=40.2
Q ss_pred HHHHhCC-CEEEEcCChhhHhccCCCCceecCcccccCCCCCCC-HHHHHHHHhcCCCCCeEEEEcCCc-hHHHH--HHH
Q 030104 81 HELLQAG-HRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKN-LKFVEEVSTRFRKHDEIIVGCQSG-KRSMM--AAT 155 (183)
Q Consensus 81 ~~~~~~~-~~lIDvR~~~e~~~ghIpgAvnip~~~~~~~~~~~~-~~~~~~~~~~l~~~~~ivv~c~~g-~~s~~--a~~ 155 (183)
..+.+.+ ..|||+|+..+-...++ .-+++|+.+......... .+.++.....+..+.+|+|+|..| .||.. ++.
T Consensus 26 ~~L~~~gI~~Vi~l~~~~~~~~~~i-~~~~ip~~D~~~~~l~~~~~~~~~fi~~~~~~~~~VlVHC~aG~~RSg~~~~ay 104 (165)
T 1wrm_A 26 EQLSKNKVTHILSVHDSARPMLEGV-KYLCIPAADSPSQNLTRHFKESIKFIHECRLRGESCLVHCLAGVSRSVTLVIAY 104 (165)
T ss_dssp HHHHHTTEEEEEECSTTCCCCSTTC-EEEECCCCSSTTSCCGGGHHHHHHHHHHHHHTTCEEEEECSSSSSHHHHHHHHH
T ss_pred HHHHHCCCcEEEEecCCCCCCCCCC-eEEEEECCCCCCccHHHHHHHHHHHHHHHHHCCCeEEEECCCCCChhHHHHHHH
Confidence 3344456 67999998653211111 135666643211111111 111111111134578999999999 47775 344
Q ss_pred HHH-cCCC
Q 030104 156 DLL-NGFA 162 (183)
Q Consensus 156 ~L~-~G~~ 162 (183)
.+. .|++
T Consensus 105 Lm~~~~~~ 112 (165)
T 1wrm_A 105 IMTVTDFG 112 (165)
T ss_dssp HHHTSSCC
T ss_pred HHHHcCCC
Confidence 445 6763
No 77
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=90.83 E-value=0.72 Score=32.38 Aligned_cols=84 Identities=13% Similarity=0.040 Sum_probs=42.2
Q ss_pred HHHHHHhCC-CEEEEcCChhhHhc--cCCC-C--ceecCcccccCCCCCCC-HHHHHHHHhcCCCCCeEEEEcCCc-hHH
Q 030104 79 VAHELLQAG-HRYLDVRTPEEFSA--GHAT-G--AINVPYMYRVGSGMTKN-LKFVEEVSTRFRKHDEIIVGCQSG-KRS 150 (183)
Q Consensus 79 ~~~~~~~~~-~~lIDvR~~~e~~~--ghIp-g--Avnip~~~~~~~~~~~~-~~~~~~~~~~l~~~~~ivv~c~~g-~~s 150 (183)
++..+.+.+ ..|||+|+..|... -..+ | -+++|..+......... .+..+.....+..+.+|+|+|..| .||
T Consensus 25 d~~~L~~~gI~~Vi~l~~~~e~~~~~~~~~~~~~~~~ip~~d~~~~~l~~~~~~~~~~i~~~~~~~~~vlvHC~aG~~RS 104 (154)
T 2r0b_A 25 KLPVLQKHGITHIICIRQNIEANFIKPNFQQLFRYLVLDIADNPVENIIRFFPMTKEFIDGSLQMGGKVLVHGNAGISRS 104 (154)
T ss_dssp GHHHHHHTTCCEEEEEECGGGTTTSSCCCTTTSEEEEEECCSSTTSCCGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHH
T ss_pred cHHHHHHcCCeEEEEeCCccccccCCCCCcCceeEEEEECCCCCcccHHHHHHHHHHHHHHHHhcCCCEEEEcCCCCChH
Confidence 344444556 68999998766321 1122 2 24566543211111111 111111111133578999999999 487
Q ss_pred HH--HHHHHH-cCCC
Q 030104 151 MM--AATDLL-NGFA 162 (183)
Q Consensus 151 ~~--a~~~L~-~G~~ 162 (183)
.. ++..+. .|.+
T Consensus 105 ~~~~~ayl~~~~~~~ 119 (154)
T 2r0b_A 105 AAFVIAYIMETFGMK 119 (154)
T ss_dssp HHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHcCCC
Confidence 74 344445 6764
No 78
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=90.03 E-value=0.59 Score=34.37 Aligned_cols=78 Identities=14% Similarity=0.138 Sum_probs=39.6
Q ss_pred HHhCC-CEEEEcCChhhHhccCCCC--ceecCcccccCCCCCCC-HHHHHHHHhcCCCCCeEEEEcCCc-hHHHH--HHH
Q 030104 83 LLQAG-HRYLDVRTPEEFSAGHATG--AINVPYMYRVGSGMTKN-LKFVEEVSTRFRKHDEIIVGCQSG-KRSMM--AAT 155 (183)
Q Consensus 83 ~~~~~-~~lIDvR~~~e~~~ghIpg--Avnip~~~~~~~~~~~~-~~~~~~~~~~l~~~~~ivv~c~~g-~~s~~--a~~ 155 (183)
+.+.+ ..|||++...+ ....+| -+++|+.+......... .+.++.....+..+.+|+|+|..| .||.. ++.
T Consensus 41 L~~~gIt~Vi~l~~~~~--~~~~~~i~~~~ipi~D~~~~~~~~~~~~~~~fI~~~~~~~~~VLVHC~aG~sRS~~vv~ay 118 (188)
T 2esb_A 41 LSSNQITMVINVSVEVV--NTLYEDIQYMQVPVADSPNSRLCDFFDPIADHIHSVEMKQGRTLLHCAAGVSRSAALCLAY 118 (188)
T ss_dssp HHHTTCCEEEECCSSCC--CCCCTTCEEEECCCCSCTTSCGGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHHHHH
T ss_pred HHHCCCcEEEEecCCCC--CcCCCCCEEEEEeCcCCCCccHHHHHHHHHHHHHHHHHcCCEEEEECCCCCchHHHHHHHH
Confidence 33456 68999997432 111233 24566643211111111 111111112234578999999999 58763 344
Q ss_pred HHH-cCCC
Q 030104 156 DLL-NGFA 162 (183)
Q Consensus 156 ~L~-~G~~ 162 (183)
.+. .|++
T Consensus 119 Lm~~~~~s 126 (188)
T 2esb_A 119 LMKYHAMS 126 (188)
T ss_dssp HHHHSCCC
T ss_pred HHHHcCCC
Confidence 555 7764
No 79
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*
Probab=89.83 E-value=0.48 Score=34.38 Aligned_cols=81 Identities=14% Similarity=0.228 Sum_probs=39.9
Q ss_pred HHHhCC-CEEEEcCChhhHhc-----cCC--CC--ceecCcccccCCCCCCC-HHHHHHHHhcCCC-CCeEEEEcCCch-
Q 030104 82 ELLQAG-HRYLDVRTPEEFSA-----GHA--TG--AINVPYMYRVGSGMTKN-LKFVEEVSTRFRK-HDEIIVGCQSGK- 148 (183)
Q Consensus 82 ~~~~~~-~~lIDvR~~~e~~~-----ghI--pg--Avnip~~~~~~~~~~~~-~~~~~~~~~~l~~-~~~ivv~c~~g~- 148 (183)
.+.+.+ ..|||+++..++.. ... .| -+++|+.+.-....... .+.++.....+.. +.+|+|.|..|.
T Consensus 48 ~L~~~gI~~Vi~l~~~~~~~~~~~~~~~~~~~gi~~~~ip~~D~~~~~~~~~~~~~~~~i~~~~~~~~~~VlVHC~~G~~ 127 (183)
T 3f81_A 48 KLQKLGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIKANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYS 127 (183)
T ss_dssp HHHHHTCCEEEETTBSSSTTSBCCCTGGGTTTTCEEEECCCCCSTTSCGGGGHHHHHHHHHHHHHSTTCCEEEECSSSSS
T ss_pred HHHHCCCcEEEECCCCccccccccchhhcccCCCEEEEEEcCCCCcccHHHHHHHHHHHHHHHHHcCCCeEEEECCCCcc
Confidence 333445 78999997655321 001 11 24666643221111111 1112222222233 689999999986
Q ss_pred HHHH--HHHHHH-cCCC
Q 030104 149 RSMM--AATDLL-NGFA 162 (183)
Q Consensus 149 ~s~~--a~~~L~-~G~~ 162 (183)
|+.. ++..+. .|++
T Consensus 128 RSg~~v~ayLm~~~~~~ 144 (183)
T 3f81_A 128 RSPTLVIAYLMMRQKMD 144 (183)
T ss_dssp HHHHHHHHHHHHHHCCC
T ss_pred hHHHHHHHHHHHHhCCC
Confidence 7764 333444 6763
No 80
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens}
Probab=89.45 E-value=0.6 Score=34.41 Aligned_cols=80 Identities=18% Similarity=0.177 Sum_probs=40.4
Q ss_pred HHHHhCC-CEEEEcCChhhHhccCCCC--ceecCcccccCCCCCCC-HHHHHHHHhcCCCCCeEEEEcCCc-hHHHH--H
Q 030104 81 HELLQAG-HRYLDVRTPEEFSAGHATG--AINVPYMYRVGSGMTKN-LKFVEEVSTRFRKHDEIIVGCQSG-KRSMM--A 153 (183)
Q Consensus 81 ~~~~~~~-~~lIDvR~~~e~~~ghIpg--Avnip~~~~~~~~~~~~-~~~~~~~~~~l~~~~~ivv~c~~g-~~s~~--a 153 (183)
..+.+.+ ..|||+|+..+ ....+| -+++|+.+......... .+.++.....+..+.+|+|+|..| .|+.. +
T Consensus 45 ~~L~~~gI~~Vi~l~~~~~--~~~~~gi~y~~ipi~D~~~~~l~~~~~~~~~fi~~~~~~~~~VlVHC~aG~~RSgtvv~ 122 (190)
T 2wgp_A 45 HLLQARGITCIVNATIEIP--NFNWPQFEYVKVPLADMPHAPIGLYFDTVADKIHSVSRKHGATLVHCAAGVSRSATLCI 122 (190)
T ss_dssp HHHHHTTCCEEEECCSSSC--CCCCTTSEEEECCCCSSTTSCGGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHHH
T ss_pred HHHHHCCCcEEEEecCCCC--CCCCCCCEEEEEEcccCCCCCHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCHHHHHHH
Confidence 3344456 68999997532 112233 25566643221111111 111111111123578999999998 47763 3
Q ss_pred HHHHH-cCCC
Q 030104 154 ATDLL-NGFA 162 (183)
Q Consensus 154 ~~~L~-~G~~ 162 (183)
+..+. .|++
T Consensus 123 ayLm~~~~~s 132 (190)
T 2wgp_A 123 AYLMKFHNVC 132 (190)
T ss_dssp HHHHHHHCCC
T ss_pred HHHHHHcCCC
Confidence 45555 7763
No 81
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=88.93 E-value=0.52 Score=33.08 Aligned_cols=79 Identities=13% Similarity=0.104 Sum_probs=42.5
Q ss_pred HHHH-HhCC-CEEEEcCChhhHhcc----------CCCCceecCcccccCCCCCCCHHHHHHHHhc----CCCCCeEEEE
Q 030104 80 AHEL-LQAG-HRYLDVRTPEEFSAG----------HATGAINVPYMYRVGSGMTKNLKFVEEVSTR----FRKHDEIIVG 143 (183)
Q Consensus 80 ~~~~-~~~~-~~lIDvR~~~e~~~g----------hIpgAvnip~~~~~~~~~~~~~~~~~~~~~~----l~~~~~ivv~ 143 (183)
..++ .+.+ ..|||+|+..|.... .| .-+++|+.+.. .....+.+....+. +..+.+|+|+
T Consensus 20 ~~~ll~~~gi~~Vi~l~~~~e~~~~~~~~~~~~~~gi-~~~~~p~~d~~---~~~~~~~~~~~~~~i~~~~~~~~~vlVH 95 (157)
T 3rgo_A 20 TRRLVLDENVRGVITMNEEYETRFLCNTSKEWKKAGV-EQLRLSTVDMT---GVPTLANLHKGVQFALKYQALGQCVYVH 95 (157)
T ss_dssp HHHHHHHSCEEEEEEESCCTTTTTSSCCHHHHHHTTC-EEEEECCCTTT---SSCCHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hHHHHHHcCCCEEEECccccccccccCCHHHHHHCCC-eEEEecCCCCC---CCChHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 3444 3456 689999987654211 11 23566664321 11222333332222 3456799999
Q ss_pred cCCch-HHHHH--HHHHH-cCCC
Q 030104 144 CQSGK-RSMMA--ATDLL-NGFA 162 (183)
Q Consensus 144 c~~g~-~s~~a--~~~L~-~G~~ 162 (183)
|..|. |+..+ +..+. .|++
T Consensus 96 C~~G~~Rsg~~~~a~l~~~~~~~ 118 (157)
T 3rgo_A 96 CKAGRSRSATMVAAYLIQVHNWS 118 (157)
T ss_dssp SSSSSSHHHHHHHHHHHHHHTCC
T ss_pred CCCCCChHHHHHHHHHHHHcCCC
Confidence 99998 77744 34444 6764
No 82
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=88.72 E-value=0.52 Score=32.99 Aligned_cols=28 Identities=21% Similarity=0.358 Sum_probs=19.6
Q ss_pred CCCCeEEEEcCCc-hHHHHH--HHHHH-cCCC
Q 030104 135 RKHDEIIVGCQSG-KRSMMA--ATDLL-NGFA 162 (183)
Q Consensus 135 ~~~~~ivv~c~~g-~~s~~a--~~~L~-~G~~ 162 (183)
..+.+|+|+|..| .|+..+ +..+. .|++
T Consensus 81 ~~~~~VlVHC~~G~~RSg~~~~ayl~~~~~~~ 112 (149)
T 1zzw_A 81 QCGKGLLIHCQAGVSRSATIVIAYLMKHTRMT 112 (149)
T ss_dssp HTTCEEEEECSSSSSHHHHHHHHHHHHHSCCC
T ss_pred HcCCeEEEECCCCCCHHHHHHHHHHHHHcCCC
Confidence 3578999999999 477743 34455 7763
No 83
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=88.55 E-value=0.36 Score=33.86 Aligned_cols=27 Identities=30% Similarity=0.477 Sum_probs=19.1
Q ss_pred CCCeEEEEcCCc-hHHH-H-HHHHHH-cCCC
Q 030104 136 KHDEIIVGCQSG-KRSM-M-AATDLL-NGFA 162 (183)
Q Consensus 136 ~~~~ivv~c~~g-~~s~-~-a~~~L~-~G~~ 162 (183)
.+.+|+|+|..| .|+. . ++..+. .|++
T Consensus 84 ~~~~vlVHC~aG~~RSg~~~~ayl~~~~~~~ 114 (151)
T 2e0t_A 84 PGGKILVHCAVGVSRSATLVLAYLMLYHHLT 114 (151)
T ss_dssp TTCCEEEECSSSSHHHHHHHHHHHHHHSCCC
T ss_pred CCCcEEEECCCCCChHHHHHHHHHHHHcCCC
Confidence 578999999999 5777 3 344445 7764
No 84
>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A*
Probab=88.45 E-value=2.2 Score=33.85 Aligned_cols=42 Identities=17% Similarity=0.203 Sum_probs=28.1
Q ss_pred CcccCHHHHHHHHhCC-CEEEEcCChhhHhcc----CCCCc--eecCcc
Q 030104 72 PTSVPVRVAHELLQAG-HRYLDVRTPEEFSAG----HATGA--INVPYM 113 (183)
Q Consensus 72 ~~~i~~~~~~~~~~~~-~~lIDvR~~~e~~~g----hIpgA--vnip~~ 113 (183)
...++.+++..+.+-+ -.|||.|++.|.... ..+|. +|+|+.
T Consensus 53 l~~lt~~d~~~L~~lGI~tVIDLR~~~E~~~~~pd~~~~Gi~~~~iPi~ 101 (296)
T 1ywf_A 53 LSRLDDAGRATLRRLGITDVADLRSSREVARRGPGRVPDGIDVHLLPFP 101 (296)
T ss_dssp CTTCCHHHHHHHHHHTCCEEEECCCHHHHHHHCSCCCCTTCEEEECCCC
T ss_pred cccCCHHHHHHHHhCCCCEEEECcChhhhhccCCCCCCCCCEEEEecCc
Confidence 3456778887776667 789999998885422 33453 567764
No 85
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}
Probab=87.94 E-value=0.71 Score=34.87 Aligned_cols=77 Identities=14% Similarity=0.122 Sum_probs=38.6
Q ss_pred hCC-CEEEEcCChhh-HhccCCCCceecCcccccCCCCCCC-HHHHHHHHhcCCCCCeEEEEcCCch-HHHH--HHHHHH
Q 030104 85 QAG-HRYLDVRTPEE-FSAGHATGAINVPYMYRVGSGMTKN-LKFVEEVSTRFRKHDEIIVGCQSGK-RSMM--AATDLL 158 (183)
Q Consensus 85 ~~~-~~lIDvR~~~e-~~~ghIpgAvnip~~~~~~~~~~~~-~~~~~~~~~~l~~~~~ivv~c~~g~-~s~~--a~~~L~ 158 (183)
+.+ ..|||++.... +....| .-+++|+.+......... .+.++.+...+..+.+|+|+|..|. |+.. +++.+.
T Consensus 29 ~~GIt~VInl~~e~~~~~~~gi-~y~~ipi~D~~~~~l~~~~~~~~~fI~~~~~~~~~VLVHC~aG~sRSgtvv~AYLm~ 107 (211)
T 2g6z_A 29 NLHITALLNVSRRTSEACMTHL-HYKWIPVEDSHTADISSHFQEAIDFIDCVREKGGKVLVHSEAGISRSPTICMAYLMK 107 (211)
T ss_dssp HHTCCEEEECSSCCCCTTCTTS-EEEECCCCSSTTSCCGGGHHHHHHHHHHHHHTTCCEEEEESSSSSHHHHHHHHHHHH
T ss_pred HCCCCEEEEcCCCCccccccCC-EEEEeeCCCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEECCCCCCcHHHHHHHHHHH
Confidence 345 68999997532 111111 135667643222221111 1112222222345789999999994 7763 445555
Q ss_pred -cCCC
Q 030104 159 -NGFA 162 (183)
Q Consensus 159 -~G~~ 162 (183)
.|++
T Consensus 108 ~~g~s 112 (211)
T 2g6z_A 108 TKQFR 112 (211)
T ss_dssp HHCCC
T ss_pred HcCCC
Confidence 6763
No 86
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Probab=87.30 E-value=2.4 Score=31.42 Aligned_cols=27 Identities=22% Similarity=0.415 Sum_probs=18.9
Q ss_pred CCCeEEEEcCCch-HHHH--HHHHHH-cCCC
Q 030104 136 KHDEIIVGCQSGK-RSMM--AATDLL-NGFA 162 (183)
Q Consensus 136 ~~~~ivv~c~~g~-~s~~--a~~~L~-~G~~ 162 (183)
.+.+|+|.|..|. ||.. ++..+. .|++
T Consensus 130 ~~~~VLVHC~aG~sRS~tvv~aYLm~~~~~s 160 (205)
T 2pq5_A 130 PQGRVLVHCAMGVSRSATLVLAFLMIYENMT 160 (205)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHSCCC
T ss_pred CCCeEEEECCCCCcHHHHHHHHHHHHHcCCC
Confidence 5679999999994 7773 344455 6763
No 87
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Probab=86.82 E-value=2.8 Score=31.52 Aligned_cols=28 Identities=29% Similarity=0.527 Sum_probs=19.5
Q ss_pred CCCCeEEEEcCCch-HHHH--HHHHHH-cCCC
Q 030104 135 RKHDEIIVGCQSGK-RSMM--AATDLL-NGFA 162 (183)
Q Consensus 135 ~~~~~ivv~c~~g~-~s~~--a~~~L~-~G~~ 162 (183)
..+.+|+|+|..|. ||.. +++.+. .|++
T Consensus 137 ~~~~~VLVHC~aG~sRS~tvv~aYLm~~~~~s 168 (219)
T 2y96_A 137 DDHSKILVHCVMGRSRSATLVLAYLMIHKDMT 168 (219)
T ss_dssp STTCCEEEECSSSSSHHHHHHHHHHHHHSCCC
T ss_pred ccCCeEEEECCCCCCHHHHHHHHHHHHHcCCC
Confidence 45789999999994 7763 344455 7763
No 88
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=86.12 E-value=0.64 Score=33.25 Aligned_cols=28 Identities=7% Similarity=0.248 Sum_probs=19.5
Q ss_pred CCCCeEEEEcCCch-HHH--HHHHHHH-cCCC
Q 030104 135 RKHDEIIVGCQSGK-RSM--MAATDLL-NGFA 162 (183)
Q Consensus 135 ~~~~~ivv~c~~g~-~s~--~a~~~L~-~G~~ 162 (183)
..+.+|+|.|..|. ||. .++..+. .|++
T Consensus 85 ~~~~~VlVHC~~G~sRS~~vv~ayLm~~~~~s 116 (161)
T 3emu_A 85 QRKEGVLIISGTGVNKAPAIVIAFLMYYQRLS 116 (161)
T ss_dssp HTTCEEEEEESSSSSHHHHHHHHHHHHHTTCC
T ss_pred hcCCeEEEEcCCCCcHHHHHHHHHHHHHhCCC
Confidence 45689999999986 765 3444555 7764
No 89
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=85.43 E-value=0.7 Score=32.72 Aligned_cols=79 Identities=18% Similarity=0.230 Sum_probs=39.5
Q ss_pred HHHHHhCC-CEEEEcCChhh--Hhc-cCCCCceecCcccccCCCCCCCHHHHHHHHh----cCCCCCeEEEEcCCc-hHH
Q 030104 80 AHELLQAG-HRYLDVRTPEE--FSA-GHATGAINVPYMYRVGSGMTKNLKFVEEVST----RFRKHDEIIVGCQSG-KRS 150 (183)
Q Consensus 80 ~~~~~~~~-~~lIDvR~~~e--~~~-ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~----~l~~~~~ivv~c~~g-~~s 150 (183)
...+.+.+ ..|||+|+... |.. |.| .-+++|+.+.....+ .+.+....+ .+..+.+|+|.|..| .||
T Consensus 24 ~~~L~~~gI~~Vi~l~~~~~~~~~~~~~i-~~~~ipi~D~~~~~l---~~~~~~~~~fi~~~~~~~~~VlVHC~~G~~RS 99 (155)
T 2hxp_A 24 LESLAKLGIRYILNVTPNLPNFFEKNGDF-HYKQIPISDHWSQNL---SRFFPEAIEFIDEALSQNCGVLVHSLAGVSRS 99 (155)
T ss_dssp HHHHHHTTEEEEEECSSSCCCTTTTCTTC-EEEECCCCGGGGGGH---HHHHHHHHHHHHHHHHTTCEEEEECSSSSSHH
T ss_pred HHHHHHCCCCEEEEeCCCCcccccCCCCe-EEEEEECccCCCCCH---HHHHHHHHHHHHHHHHcCCcEEEECCCCCchh
Confidence 33344456 67899997421 211 112 135677643221111 111222222 123578999999999 587
Q ss_pred HHH--HHHHH-cCCC
Q 030104 151 MMA--ATDLL-NGFA 162 (183)
Q Consensus 151 ~~a--~~~L~-~G~~ 162 (183)
..+ +..+. .|++
T Consensus 100 ~~vv~ayLm~~~~~~ 114 (155)
T 2hxp_A 100 VTVTVAYLMQKLHLS 114 (155)
T ss_dssp HHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHcCCC
Confidence 733 34444 6653
No 90
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Probab=85.01 E-value=4.8 Score=28.09 Aligned_cols=27 Identities=26% Similarity=0.340 Sum_probs=17.8
Q ss_pred CCCeEEEEcCCch-HHHH-HHHHHH-c-CCC
Q 030104 136 KHDEIIVGCQSGK-RSMM-AATDLL-N-GFA 162 (183)
Q Consensus 136 ~~~~ivv~c~~g~-~s~~-a~~~L~-~-G~~ 162 (183)
++.+|+|.|..|. |+.. ++..|. . |++
T Consensus 108 ~~~~vlVHC~aG~~RTg~~~a~~L~~~~~~~ 138 (167)
T 3s4o_A 108 PPPTIGVHCVAGLGRAPILVALALVEYGNVS 138 (167)
T ss_dssp CCCEEEEECSSSSSHHHHHHHHHHHHTTCCC
T ss_pred CCCcEEEECCCCCCHHHHHHHHHHHHhCCCC
Confidence 3789999999886 6653 333333 4 664
No 91
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Probab=85.00 E-value=6 Score=28.67 Aligned_cols=83 Identities=18% Similarity=0.221 Sum_probs=42.2
Q ss_pred cCHHH-HHHHHhCC-CEEEEcCChhh----HhccCCCCceecCcccccCCCCCCCHHHHHHHHhc------CCCCCeEEE
Q 030104 75 VPVRV-AHELLQAG-HRYLDVRTPEE----FSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTR------FRKHDEIIV 142 (183)
Q Consensus 75 i~~~~-~~~~~~~~-~~lIDvR~~~e----~~~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~~------l~~~~~ivv 142 (183)
.+.++ +..+.+.+ ..|||++++.+ +..-+| .-+++|+.+ +.....+.+...... ..++.+|+|
T Consensus 48 ~t~~~~~~~L~~~gi~~Iv~l~~~~~~~~~~~~~~i-~~~~~pi~d----~~~~~~~~~~~~~~~i~~~~~~~~~~~VlV 122 (189)
T 3rz2_A 48 ATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGI-HVLDWPFDD----GAPPSNQIVDDWLSLVKIKFREEPGCCIAV 122 (189)
T ss_dssp TTHHHHHHHHHTTTEEEEEECSCCCSCCHHHHHSSC-EEEECCCCS----SSCCCSHHHHHHHHHHHHHHHHSTTCEEEE
T ss_pred ccHHHHHHHHHHcCCcEEEEeCCCcCCHHHHHHcCc-EEEEecCCC----CCCCCHHHHHHHHHHHHHHHHhCCCCcEEE
Confidence 34444 44444555 68999997532 222222 124555432 222222333332222 146789999
Q ss_pred EcCCch-HHHH-HHHHHH-cCCC
Q 030104 143 GCQSGK-RSMM-AATDLL-NGFA 162 (183)
Q Consensus 143 ~c~~g~-~s~~-a~~~L~-~G~~ 162 (183)
.|..|. |+.. ++..|. .|++
T Consensus 123 HC~aG~gRSg~~va~~L~~~g~~ 145 (189)
T 3rz2_A 123 HCVAGLGRAPVLVALALIEGGMK 145 (189)
T ss_dssp ECSSSSTTHHHHHHHHHHTTTCC
T ss_pred ECCCCCCHHHHHHHHHHHHcCCC
Confidence 999886 6664 344444 6653
No 92
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=84.49 E-value=1.3 Score=32.02 Aligned_cols=28 Identities=21% Similarity=0.358 Sum_probs=19.6
Q ss_pred CCCCeEEEEcCCc-hHHHHH--HHHHH-cCCC
Q 030104 135 RKHDEIIVGCQSG-KRSMMA--ATDLL-NGFA 162 (183)
Q Consensus 135 ~~~~~ivv~c~~g-~~s~~a--~~~L~-~G~~ 162 (183)
..+.+|+|+|..| .||..+ +..+. .|++
T Consensus 85 ~~~~~VlVHC~aG~~RSg~~v~ayLm~~~~~~ 116 (177)
T 2oud_A 85 QCGKGLLIHCQAGVSRSATIVIAYLMKHTRMT 116 (177)
T ss_dssp HTTCEEEEECSSSSSHHHHHHHHHHHHTSCCC
T ss_pred hcCCcEEEEcCCCCCchHHHHHHHHHHHcCCC
Confidence 3578999999998 477743 34455 6764
No 93
>2jgn_A DBX, DDX3, ATP-dependent RNA helicase DDX3X; phosphorylation, nucleotide-binding, hydrolase, RNA-binding, ATP-binding, DNA-binding, nuclear protein; 1.91A {Homo sapiens}
Probab=83.87 E-value=2 Score=31.18 Aligned_cols=46 Identities=20% Similarity=0.211 Sum_probs=32.6
Q ss_pred HHHHHHhcCCCCCeEEEEcCCchHHHHHHHHHH-cCCCCeeEccccHH
Q 030104 126 FVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLL-NGFAGITDIAGGFA 172 (183)
Q Consensus 126 ~~~~~~~~l~~~~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~GG~~ 172 (183)
.+..++....++.+++|||++-..+..++..|. .|+ .+..+.|++.
T Consensus 35 ~L~~ll~~~~~~~k~lVF~~~~~~~~~l~~~L~~~g~-~~~~lhg~~~ 81 (185)
T 2jgn_A 35 FLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGY-ACTSIHGDRS 81 (185)
T ss_dssp HHHHHHHHC-CCSCEEEEESCHHHHHHHHHHHHHTTC-CEEEEC----
T ss_pred HHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHHcCC-ceEEEeCCCC
Confidence 344444445567789999999888999999999 998 6788888864
No 94
>2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR}
Probab=82.41 E-value=2.5 Score=31.14 Aligned_cols=74 Identities=15% Similarity=0.235 Sum_probs=34.8
Q ss_pred CEEEEcCChhhH-hccCCCCceecCcccccCCCCCCCHHHHHHHHhc-CCCCCeEEEEcCCc-hHHHHHH--HHHH-cCC
Q 030104 88 HRYLDVRTPEEF-SAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTR-FRKHDEIIVGCQSG-KRSMMAA--TDLL-NGF 161 (183)
Q Consensus 88 ~~lIDvR~~~e~-~~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~~-l~~~~~ivv~c~~g-~~s~~a~--~~L~-~G~ 161 (183)
..|||+|+..+. ...++ .-+++|..+.....+...-..+...+.. ...+.+|+|.|..| .|+..++ ..+. .|.
T Consensus 75 ~~Vi~l~~~~~~~~~~~~-~~~~~p~~d~~~~~l~~~~~~~~~~i~~~~~~~~~VlVHC~aG~~RSg~~v~~yL~~~~~~ 153 (195)
T 2q05_A 75 KYVLNLTMDKYTLPNSNI-NIIHIPLVDDTTTDISKYFDDVTAFLSKCDQRNEPVLVHCAAGVNRSGAMILAYLMSKNKE 153 (195)
T ss_dssp SEEEECSSSCCCCTTCCC-EEEECCCCCSSSCCCGGGHHHHHHHHHHHHHTTCCEEEECSSSSSHHHHHHHHHHHHHCCS
T ss_pred CEEEEECCCCCCcccCCc-EEEEEEcCCCCcccHHHHHHHHHHHHHHHHHcCCcEEEEcCCCCChHHHHHHHHHHHHhCC
Confidence 378999986532 11111 1245665422111111111112222222 23568999999998 4766432 2333 565
Q ss_pred C
Q 030104 162 A 162 (183)
Q Consensus 162 ~ 162 (183)
.
T Consensus 154 ~ 154 (195)
T 2q05_A 154 S 154 (195)
T ss_dssp S
T ss_pred C
Confidence 4
No 95
>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB: 2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A*
Probab=80.38 E-value=3.2 Score=28.97 Aligned_cols=71 Identities=17% Similarity=0.181 Sum_probs=36.4
Q ss_pred HHHHHHHHhCC-CEEEEcCChhhHhcc-----------CCCC--ceecCcccccCCCCCCCHHHHHHHHhcCC--CCCeE
Q 030104 77 VRVAHELLQAG-HRYLDVRTPEEFSAG-----------HATG--AINVPYMYRVGSGMTKNLKFVEEVSTRFR--KHDEI 140 (183)
Q Consensus 77 ~~~~~~~~~~~-~~lIDvR~~~e~~~g-----------hIpg--Avnip~~~~~~~~~~~~~~~~~~~~~~l~--~~~~i 140 (183)
.+++..+.+.+ ..|||+|+..|.... .-.| -+++|+.+. ...+.+.+......+. ....
T Consensus 18 ~~d~~~L~~~gi~~Vi~l~~~~e~~~~~~~~~~~~~~~~~~gi~~~~~p~~d~----~~p~~~~~~~~~~~i~~~~~~~- 92 (161)
T 2i6j_A 18 ENEILEWRKEGVKRVLVLPEDWEIEESWGDKDYYLSILKKNGLQPLHIPIPDG----GVPSDSQFLTIMKWLLSEKEGN- 92 (161)
T ss_dssp HHHHHHHHHHTCCEEEECSCHHHHHHHHSCHHHHHHHHHHTTCEEEECCCCTT----CCCCHHHHHHHHHHHHHCCTTE-
T ss_pred HHHHHHHHHCCCCEEEEcCchhhhhhhccchhhHHHHHHHcCceEEEecCCCC----CCCChHHHHHHHHHHHHhCCCC-
Confidence 34555555556 789999998664321 1122 345665311 1122233333333221 1223
Q ss_pred EEEcCCch-HHHH
Q 030104 141 IVGCQSGK-RSMM 152 (183)
Q Consensus 141 vv~c~~g~-~s~~ 152 (183)
+|+|..|. |+..
T Consensus 93 lVHC~aG~~Rtg~ 105 (161)
T 2i6j_A 93 LVHCVGGIGRTGT 105 (161)
T ss_dssp EEECSSSSHHHHH
T ss_pred EEECCCCCCHHHH
Confidence 99999984 7664
No 96
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus}
Probab=79.68 E-value=4.6 Score=28.62 Aligned_cols=27 Identities=22% Similarity=0.162 Sum_probs=17.8
Q ss_pred CCCeEEEEcCCch-HHHH--HHHHHH-cCCC
Q 030104 136 KHDEIIVGCQSGK-RSMM--AATDLL-NGFA 162 (183)
Q Consensus 136 ~~~~ivv~c~~g~-~s~~--a~~~L~-~G~~ 162 (183)
.+.+|+|.|..|. |+.. ++..+. .|++
T Consensus 112 ~~~~vlVHC~aG~~RTg~~va~~L~~~~~~~ 142 (169)
T 1yn9_A 112 PGMLVGVHCTHGINRTGYMVCRYLMHTLGIA 142 (169)
T ss_dssp TTSEEEEECSSSSHHHHHHHHHHHHHHHCCC
T ss_pred CCCcEEEECCCCCChHHHHHHHHHHHHhCCC
Confidence 5689999999885 6653 333333 6763
No 97
>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A
Probab=79.43 E-value=2.4 Score=30.51 Aligned_cols=27 Identities=22% Similarity=0.230 Sum_probs=18.1
Q ss_pred CCCeEEEEcCCch-HHHH--HHHHHH-cCCC
Q 030104 136 KHDEIIVGCQSGK-RSMM--AATDLL-NGFA 162 (183)
Q Consensus 136 ~~~~ivv~c~~g~-~s~~--a~~~L~-~G~~ 162 (183)
.+.+|+|.|..|. ||.. ++..+. .|+.
T Consensus 107 ~~~~VlVHC~aG~~RSg~~v~aylm~~~~~~ 137 (176)
T 3cm3_A 107 RNEPVLVHSAAGVNRSGAMILAYLMSKNKES 137 (176)
T ss_dssp HTCCEEEECSSSSSHHHHHHHHHHHHHCCSS
T ss_pred CCCcEEEECCcCCCHHHHHHHHHHHHHhCCC
Confidence 4679999999884 7663 333444 6654
No 98
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=79.13 E-value=2.9 Score=30.66 Aligned_cols=73 Identities=12% Similarity=0.089 Sum_probs=34.3
Q ss_pred CEEEEcCChhhHhccCCCC--ceecCcccccCCCCCC-CHHHHHHHHhcCCCCCeEEEEcCCch-HHHH--HHHHHH-cC
Q 030104 88 HRYLDVRTPEEFSAGHATG--AINVPYMYRVGSGMTK-NLKFVEEVSTRFRKHDEIIVGCQSGK-RSMM--AATDLL-NG 160 (183)
Q Consensus 88 ~~lIDvR~~~e~~~ghIpg--Avnip~~~~~~~~~~~-~~~~~~~~~~~l~~~~~ivv~c~~g~-~s~~--a~~~L~-~G 160 (183)
..||+++.........++| -+++|+.+. ..... ..+.++.+...+..+.+|+|.|..|. ||.. ++..+. .|
T Consensus 67 t~Vlnv~~e~~~~~~~~~~i~y~~ip~~d~--~~i~~~~~~~~~fI~~~~~~g~~VLVHC~~G~sRS~tvv~ayLm~~~~ 144 (182)
T 2j16_A 67 DVVINVAEEANDLRMQVPAVEYHHYRWEHD--SQIALDLPSLTSIIHAATTKREKILIHAQCGLSRSATLIIAYIMKYHN 144 (182)
T ss_dssp SEEEECCSCC--------CCEEEECCCSSG--GGGGGGHHHHHHHHHHHHHTTCCEEEEESSCCSHHHHHHHHHHHHHTT
T ss_pred CEEEEecCCCCCchhccCCceEEEEecCCC--chHHHHHHHHHHHHHHHHhcCCeEEEECCCCCChHHHHHHHHHHHHcC
Confidence 5789998754322222333 245665321 11111 11112222222346789999999985 7663 444445 66
Q ss_pred CC
Q 030104 161 FA 162 (183)
Q Consensus 161 ~~ 162 (183)
++
T Consensus 145 ~s 146 (182)
T 2j16_A 145 LS 146 (182)
T ss_dssp CC
T ss_pred CC
Confidence 63
No 99
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=76.14 E-value=6.2 Score=30.38 Aligned_cols=28 Identities=18% Similarity=0.281 Sum_probs=22.8
Q ss_pred CeEEEEcCCch---HHHHHHHHHH-cCCCCeeE
Q 030104 138 DEIIVGCQSGK---RSMMAATDLL-NGFAGITD 166 (183)
Q Consensus 138 ~~ivv~c~~g~---~s~~a~~~L~-~G~~~v~~ 166 (183)
.+|+|+|..|+ .+..++++|. .||+ |.+
T Consensus 59 ~~v~VlcG~GNNGGDGlv~AR~L~~~G~~-V~v 90 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGDGLVCARHLKLFGYN-PVV 90 (246)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCC-EEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCe-EEE
Confidence 58999999877 5668999999 9994 553
No 100
>2rb4_A ATP-dependent RNA helicase DDX25; rossmann fold, structural genomics, structural consortium, SGC, alternative initiation, ATP-binding, devel protein; 2.80A {Homo sapiens}
Probab=73.54 E-value=7.7 Score=27.46 Aligned_cols=35 Identities=14% Similarity=0.429 Sum_probs=30.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHH-cCCCCeeEccccH
Q 030104 136 KHDEIIVGCQSGKRSMMAATDLL-NGFAGITDIAGGF 171 (183)
Q Consensus 136 ~~~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~GG~ 171 (183)
+..+++|||++-..+..++..|. .|+ .+..+.|++
T Consensus 33 ~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~~~g~~ 68 (175)
T 2rb4_A 33 TIGQAIIFCQTRRNAKWLTVEMIQDGH-QVSLLSGEL 68 (175)
T ss_dssp CCSEEEEECSCHHHHHHHHHHHHTTTC-CEEEECSSC
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHcCC-cEEEEeCCC
Confidence 45689999999988999999999 998 678888874
No 101
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=72.79 E-value=3.5 Score=32.54 Aligned_cols=86 Identities=10% Similarity=0.043 Sum_probs=42.7
Q ss_pred HHHHHHHHhCC-CEEEEcCChhhHhcc------------CCC--CceecCcccccCCCCCC-CHHHHHHHHhcC-CCCCe
Q 030104 77 VRVAHELLQAG-HRYLDVRTPEEFSAG------------HAT--GAINVPYMYRVGSGMTK-NLKFVEEVSTRF-RKHDE 139 (183)
Q Consensus 77 ~~~~~~~~~~~-~~lIDvR~~~e~~~g------------hIp--gAvnip~~~~~~~~~~~-~~~~~~~~~~~l-~~~~~ 139 (183)
.+++..+.+.+ ..||+++...+.... ... .-+++|+.+.....+.. ..+.+..+...+ ..+.+
T Consensus 29 ~~d~~~L~~~GIt~Vlnl~~~~e~~~~g~~~~~~~~~~~~~~gi~~~~ipi~D~~~~~l~~~~~~~~~~I~~~l~~~g~~ 108 (294)
T 3nme_A 29 PEDVDKLRKIGVKTIFCLQQDPDLEYFGVDISSIQAYAKKYSDIQHIRCEIRDFDAFDLRMRLPAVVGTLYKAVKRNGGV 108 (294)
T ss_dssp THHHHHHHHTTEEEEEECCCHHHHHHTTCCHHHHHHHHHTCTTCEEEECCCCTTCHHHHHHHHHHHHHHHHHHHHHHCSE
T ss_pred HHHHHHHHHCCCCEEEECCCCcchhhccCChhhhhhhhhhcCCcEEEEEeCCCCCCCCHHHHHHHHHHHHHHHHHhCCCE
Confidence 45565666667 789999987763321 011 13567764221100000 001111111122 23678
Q ss_pred EEEEcCCch-HHHH--HHHHHH-cCCC
Q 030104 140 IIVGCQSGK-RSMM--AATDLL-NGFA 162 (183)
Q Consensus 140 ivv~c~~g~-~s~~--a~~~L~-~G~~ 162 (183)
|+|.|..|. ||.. ++..+. .|+.
T Consensus 109 VLVHC~aG~sRS~tvv~ayLm~~~g~s 135 (294)
T 3nme_A 109 TYVHSTAGMGRAPAVALTYMFWVQGYK 135 (294)
T ss_dssp EEEECSSSSSHHHHHHHHHHHHTSCCC
T ss_pred EEEECCCCCchhHHHHHHHHHHHhCCC
Confidence 999999996 7663 333344 5653
No 102
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=72.70 E-value=4.2 Score=31.59 Aligned_cols=28 Identities=7% Similarity=0.162 Sum_probs=22.6
Q ss_pred CeEEEEcCCch---HHHHHHHHHH-cCCCCeeE
Q 030104 138 DEIIVGCQSGK---RSMMAATDLL-NGFAGITD 166 (183)
Q Consensus 138 ~~ivv~c~~g~---~s~~a~~~L~-~G~~~v~~ 166 (183)
.+|+|+|..|+ .+..++++|. .||+ |.+
T Consensus 86 ~~vlVlcG~GNNGGDGlv~AR~L~~~G~~-V~v 117 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQGISCGRHLANHDVQ-VIL 117 (259)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCe-EEE
Confidence 58999999877 5668999999 9994 543
No 103
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A
Probab=71.51 E-value=26 Score=28.26 Aligned_cols=80 Identities=13% Similarity=0.091 Sum_probs=42.2
Q ss_pred HHHHHHHhCC-CEEEEcCChh----hHhccCCCCceecCcccccCCCCCCCHHHHHHHHhcC-CCCCeEEEEcCCch-HH
Q 030104 78 RVAHELLQAG-HRYLDVRTPE----EFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRF-RKHDEIIVGCQSGK-RS 150 (183)
Q Consensus 78 ~~~~~~~~~~-~~lIDvR~~~----e~~~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~~l-~~~~~ivv~c~~g~-~s 150 (183)
+.+..+.+.+ ..|||+|+.. .+....| .-+++|+.+ +.....+.+...+..+ ..+.+|+|.|..|. |+
T Consensus 209 ~~~~~L~~~GI~~VInL~~~~y~~~~~~~~gi-~~~~ipi~D----~~~P~~~~~~~fi~~~~~~~~~VLVHC~aG~gRT 283 (348)
T 1ohe_A 209 TYIQYFKNHNVTTIIRLNKRMYDAKRFTDAGF-DHHDLFFAD----GSTPTDAIVKEFLDICENAEGAIAVHSKAGLGRT 283 (348)
T ss_dssp HHHHHHHHTTEEEEEECSCCSSCTHHHHTTTC-EEEECCCCT----TCCCCHHHHHHHHHHHHSCSSEEEEECSSSSHHH
T ss_pred HHHHHHHHcCCCEEEECCCCcCChhhhhcCCc-EEEEecCCC----CCCCCHHHHHHHHHHHHhCCCcEEEECCCCCChH
Confidence 3444455556 6899999642 2222111 124566532 1122334444444332 45789999999884 76
Q ss_pred HH--HHHHHH-cCCC
Q 030104 151 MM--AATDLL-NGFA 162 (183)
Q Consensus 151 ~~--a~~~L~-~G~~ 162 (183)
.. ++..+. .|++
T Consensus 284 GtvvaayLm~~~g~s 298 (348)
T 1ohe_A 284 GTLIACYIMKHYRMT 298 (348)
T ss_dssp HHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHcCCC
Confidence 63 333333 6653
No 104
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=71.01 E-value=4.6 Score=31.54 Aligned_cols=28 Identities=25% Similarity=0.424 Sum_probs=22.8
Q ss_pred CeEEEEcCCch---HHHHHHHHHH-cCCCCeeE
Q 030104 138 DEIIVGCQSGK---RSMMAATDLL-NGFAGITD 166 (183)
Q Consensus 138 ~~ivv~c~~g~---~s~~a~~~L~-~G~~~v~~ 166 (183)
++|+|+|..|+ .+..+++.|. .|| +|.+
T Consensus 80 ~~VlVlcG~GNNGGDGlv~AR~L~~~G~-~V~V 111 (265)
T 2o8n_A 80 PTVLVICGPGNNGGDGLVCARHLKLFGY-QPTI 111 (265)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTC-EEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCC-cEEE
Confidence 58999999877 5668999999 999 4654
No 105
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=70.69 E-value=4.8 Score=32.10 Aligned_cols=28 Identities=7% Similarity=0.152 Sum_probs=22.6
Q ss_pred CeEEEEcCCch---HHHHHHHHHH-cCCCCeeE
Q 030104 138 DEIIVGCQSGK---RSMMAATDLL-NGFAGITD 166 (183)
Q Consensus 138 ~~ivv~c~~g~---~s~~a~~~L~-~G~~~v~~ 166 (183)
.+|+|+|..|+ .+..+|++|. .|| +|.+
T Consensus 133 ~~vlVlcG~GNNGGDGlv~AR~L~~~G~-~V~V 164 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQGISCGRHLANHDV-QVIL 164 (306)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTC-EEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCC-cEEE
Confidence 58999999877 5668999999 999 4543
No 106
>1t5i_A C_terminal domain of A probable ATP-dependent RNA helicase; RECA-like fold, PRE-mRNA processing protein; 1.90A {Homo sapiens} SCOP: c.37.1.19
Probab=69.96 E-value=9.4 Score=27.06 Aligned_cols=43 Identities=16% Similarity=0.281 Sum_probs=33.2
Q ss_pred HHHHHhcCCCCCeEEEEcCCchHHHHHHHHHH-cCCCCeeEccccH
Q 030104 127 VEEVSTRFRKHDEIIVGCQSGKRSMMAATDLL-NGFAGITDIAGGF 171 (183)
Q Consensus 127 ~~~~~~~l~~~~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~GG~ 171 (183)
+..++... +..+++|||++-..+..++..|. .|+ ++..+.|++
T Consensus 22 L~~ll~~~-~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~~hg~~ 65 (172)
T 1t5i_A 22 LFDLLDVL-EFNQVVIFVKSVQRCIALAQLLVEQNF-PAIAIHRGM 65 (172)
T ss_dssp HHHHHHHS-CCSSEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTS
T ss_pred HHHHHHhC-CCCcEEEEECCHHHHHHHHHHHHhcCC-CEEEEECCC
Confidence 33444444 45689999999989999999999 998 577788875
No 107
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=69.33 E-value=26 Score=24.44 Aligned_cols=84 Identities=19% Similarity=0.178 Sum_probs=45.2
Q ss_pred ccCHHHHHHHHhCC-CEEEEcCChhhHhc-----cCC--CC--ceecCcccccCCCCCCCHHHHHHHHhcC--CCCCeEE
Q 030104 74 SVPVRVAHELLQAG-HRYLDVRTPEEFSA-----GHA--TG--AINVPYMYRVGSGMTKNLKFVEEVSTRF--RKHDEII 141 (183)
Q Consensus 74 ~i~~~~~~~~~~~~-~~lIDvR~~~e~~~-----ghI--pg--Avnip~~~~~~~~~~~~~~~~~~~~~~l--~~~~~iv 141 (183)
.++.+.+..+.+.| -++|+.|+..+-.. ..+ .| .+++|.+ . .....+.+....+.+ ..+++|+
T Consensus 27 ~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~D--v---~~~~~~~v~~~~~~i~~~~G~dVL 101 (157)
T 3gxh_A 27 LPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVD--W---QNPKVEDVEAFFAAMDQHKGKDVL 101 (157)
T ss_dssp CCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCC--T---TSCCHHHHHHHHHHHHHTTTSCEE
T ss_pred CCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCC--C---CCCCHHHHHHHHHHHHhcCCCCEE
Confidence 35567777777777 67788886543210 000 12 4566663 1 111124444444432 1233899
Q ss_pred EEcCCchHHHHHHHHH-H-cCCC
Q 030104 142 VGCQSGKRSMMAATDL-L-NGFA 162 (183)
Q Consensus 142 v~c~~g~~s~~a~~~L-~-~G~~ 162 (183)
|.|.++.+...++... . .|.+
T Consensus 102 VnnAgg~r~~~l~~~~~~~~G~~ 124 (157)
T 3gxh_A 102 VHCLANYRASAFAYLYQLKQGQN 124 (157)
T ss_dssp EECSBSHHHHHHHHHHHHHTTCC
T ss_pred EECCCCCCHHHHHHHHHHHcCCC
Confidence 9999988665443333 3 6763
No 108
>1fuk_A Eukaryotic initiation factor 4A; helicase, DEAD-box protein, translation; 1.75A {Saccharomyces cerevisiae} SCOP: c.37.1.19
Probab=68.63 E-value=11 Score=26.43 Aligned_cols=44 Identities=11% Similarity=0.283 Sum_probs=33.7
Q ss_pred HHHHHHhcCCCCCeEEEEcCCchHHHHHHHHHH-cCCCCeeEccccH
Q 030104 126 FVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLL-NGFAGITDIAGGF 171 (183)
Q Consensus 126 ~~~~~~~~l~~~~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~GG~ 171 (183)
.+..++... +..+++|+|++-..+..++..|. .|+ .+..+.|++
T Consensus 20 ~l~~ll~~~-~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~~~~~~ 64 (165)
T 1fuk_A 20 CLTDLYDSI-SVTQAVIFCNTRRKVEELTTKLRNDKF-TVSAIYSDL 64 (165)
T ss_dssp HHHHHHHHT-TCSCEEEEESSHHHHHHHHHHHHHTTC-CEEEECTTS
T ss_pred HHHHHHHhC-CCCCEEEEECCHHHHHHHHHHHHHcCC-CEEEEECCC
Confidence 344444444 45689999999888999999999 998 577788874
No 109
>2hjv_A ATP-dependent RNA helicase DBPA; parallel alpha-beta, hydrolase; 1.95A {Bacillus subtilis}
Probab=68.19 E-value=5.1 Score=28.12 Aligned_cols=35 Identities=23% Similarity=0.411 Sum_probs=29.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHH-cCCCCeeEccccH
Q 030104 136 KHDEIIVGCQSGKRSMMAATDLL-NGFAGITDIAGGF 171 (183)
Q Consensus 136 ~~~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~GG~ 171 (183)
...+++|||++-..+..++..|. .|+ .+..+.|++
T Consensus 34 ~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~~hg~~ 69 (163)
T 2hjv_A 34 NPDSCIIFCRTKEHVNQLTDELDDLGY-PCDKIHGGM 69 (163)
T ss_dssp CCSSEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTS
T ss_pred CCCcEEEEECCHHHHHHHHHHHHHcCC-cEEEEeCCC
Confidence 45689999999989999999999 998 577888875
No 110
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=67.69 E-value=9 Score=29.82 Aligned_cols=88 Identities=14% Similarity=0.109 Sum_probs=53.4
Q ss_pred cCHHHHHHHHh----CC-CEEEEcCChhhHhccCCCCceecCcccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCchH
Q 030104 75 VPVRVAHELLQ----AG-HRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGKR 149 (183)
Q Consensus 75 i~~~~~~~~~~----~~-~~lIDvR~~~e~~~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~~ 149 (183)
++.++++++.+ -+ -++|+|.+.+|.+...=-|+--|-..-..-..+..+.+....+...++.+ +++++.+|..
T Consensus 137 L~~~~l~~l~~~A~~lGl~~LvEVh~~~El~rAl~~~a~iIGINNRnL~tf~vdl~~t~~L~~~ip~~--~~~VsESGI~ 214 (258)
T 4a29_A 137 LTERELESLLEYARSYGMEPLILINDENDLDIALRIGARFIGIMSRDFETGEINKENQRKLISMIPSN--VVKVAKLGIS 214 (258)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHHTTCSEEEECSBCTTTCCBCHHHHHHHHTTSCTT--SEEEEEESSC
T ss_pred cCHHHHHHHHHHHHHHhHHHHHhcchHHHHHHHhcCCCcEEEEeCCCccccccCHHHHHHHHhhCCCC--CEEEEcCCCC
Confidence 45555555543 23 67899999888764222233222211111123344556667777777654 5778899998
Q ss_pred HHHHHHHHH-cCCCCe
Q 030104 150 SMMAATDLL-NGFAGI 164 (183)
Q Consensus 150 s~~a~~~L~-~G~~~v 164 (183)
+..-+..+. .|++.+
T Consensus 215 t~~dv~~l~~~G~~a~ 230 (258)
T 4a29_A 215 ERNEIEELRKLGVNAF 230 (258)
T ss_dssp CHHHHHHHHHTTCCEE
T ss_pred CHHHHHHHHHCCCCEE
Confidence 888888899 999644
No 111
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Probab=67.01 E-value=27 Score=23.78 Aligned_cols=87 Identities=20% Similarity=0.260 Sum_probs=43.5
Q ss_pred CCcccCHHH-HHHHHhCC-CEEEEcCChhh----HhccCCCCceecCcccccCCCCCCCHHHHHHHHhcC------CCCC
Q 030104 71 VPTSVPVRV-AHELLQAG-HRYLDVRTPEE----FSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRF------RKHD 138 (183)
Q Consensus 71 ~~~~i~~~~-~~~~~~~~-~~lIDvR~~~e----~~~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~~l------~~~~ 138 (183)
.+...+.++ +..+.+.+ ..||++++... +...++ .-+++|..+ +.....+.+......+ .++.
T Consensus 23 ~p~~~t~~df~~~l~~~gi~~Iv~l~~~~~~~~~~~~~~~-~~~~~p~~d----~~~~~~~~~~~~~~~i~~~~~~~~~~ 97 (159)
T 1rxd_A 23 NPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGI-HVLDWPFDD----GAPPSNQIVDDWLSLVKIKFREEPGC 97 (159)
T ss_dssp CCCGGGHHHHHHHHHHTTEEEEEECSCCCSCCHHHHHTTC-EEEECCC------CCCCCHHHHHHHHHHHHHHHHHSTTC
T ss_pred CCccccHHHHHHHHHHcCCCEEEEcCCCccCHHHHHHcCC-EEEeCCCcC----CCCCCHHHHHHHHHHHHHHHHhCCCC
Confidence 344456666 45555566 67889886421 211122 124555321 1222233333222221 3468
Q ss_pred eEEEEcCCch-HHHH-HHHHHH-cCCC
Q 030104 139 EIIVGCQSGK-RSMM-AATDLL-NGFA 162 (183)
Q Consensus 139 ~ivv~c~~g~-~s~~-a~~~L~-~G~~ 162 (183)
+|+|.|..|. |+.. ++..|. .|++
T Consensus 98 ~vlVHC~aG~~Rtg~~~a~~l~~~~~~ 124 (159)
T 1rxd_A 98 CIAVHCVAGLGRAPVLVALALIEGGMK 124 (159)
T ss_dssp EEEEECSSSSTTHHHHHHHHHHHTTCC
T ss_pred eEEEECCCCCCHHHHHHHHHHHHhCCC
Confidence 9999999885 7664 333344 6653
No 112
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=66.48 E-value=11 Score=32.26 Aligned_cols=29 Identities=21% Similarity=0.324 Sum_probs=23.1
Q ss_pred CCCeEEEEcCCch---HHHHHHHHHH-cCCCCee
Q 030104 136 KHDEIIVGCQSGK---RSMMAATDLL-NGFAGIT 165 (183)
Q Consensus 136 ~~~~ivv~c~~g~---~s~~a~~~L~-~G~~~v~ 165 (183)
+.++|+|+|..|+ ....+++.|. .|| +|.
T Consensus 51 ~~~~v~VlcG~GNNGGDGlv~AR~L~~~G~-~V~ 83 (502)
T 3rss_A 51 SDYRFLVLCGGGNNGGDGFVVARNLLGVVK-DVL 83 (502)
T ss_dssp TTCEEEEEECSSHHHHHHHHHHHHHTTTSS-EEE
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCC-eEE
Confidence 4678999999877 5668888999 999 454
No 113
>2i4i_A ATP-dependent RNA helicase DDX3X; DEAD, structural genomics, SGC, structural GE consortium, hydrolase; HET: AMP; 2.20A {Homo sapiens}
Probab=66.43 E-value=9.4 Score=30.60 Aligned_cols=45 Identities=20% Similarity=0.208 Sum_probs=35.7
Q ss_pred HHHHHHhcCCCCCeEEEEcCCchHHHHHHHHHH-cCCCCeeEccccH
Q 030104 126 FVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLL-NGFAGITDIAGGF 171 (183)
Q Consensus 126 ~~~~~~~~l~~~~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~GG~ 171 (183)
.+...+.....+.+++|||++-..+..++..|. .|+ ++..+.|++
T Consensus 265 ~l~~~l~~~~~~~~~lVf~~~~~~~~~l~~~L~~~~~-~~~~~h~~~ 310 (417)
T 2i4i_A 265 FLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGY-ACTSIHGDR 310 (417)
T ss_dssp HHHHHHHTCCTTCEEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTS
T ss_pred HHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHHCCC-CeeEecCCC
Confidence 344455555567899999999888999999999 998 678888875
No 114
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A
Probab=60.05 E-value=42 Score=25.39 Aligned_cols=85 Identities=13% Similarity=0.079 Sum_probs=42.5
Q ss_pred ccCHHHHHHHHh---CC-CEEEEcCChh------hHhccCCCCceecCcccccCCCCCCCHHHHHHHHhc----CC--CC
Q 030104 74 SVPVRVAHELLQ---AG-HRYLDVRTPE------EFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTR----FR--KH 137 (183)
Q Consensus 74 ~i~~~~~~~~~~---~~-~~lIDvR~~~------e~~~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~~----l~--~~ 137 (183)
..+++++.+.++ .+ ..|||++... .|...+| .-+++|+.+ .+.....+.+...... +. ++
T Consensus 66 r~~~~~v~~~l~~~~~~i~~VInL~~e~~~y~~~~~~~~gi-~y~~~p~~D---~~~~P~~~~l~~~~~~i~~~~~~~~~ 141 (241)
T 2c46_A 66 RFHPSMLSNYLKSLKVKMGLLVDLTNTSRFYDRNDIEKEGI-KYIKLQCKG---HGECPTTENTETFIRLCERFNERNPP 141 (241)
T ss_dssp CCCHHHHHHHHHHHTCEEEEEEECSSCSCSSCTHHHHTTTC-EEEECCCCC---TTCCCCHHHHHHHHHHHTTC-----C
T ss_pred cCCHHHHHHHHHHhCCCcceeeeccCCCCCCCHHHHHHCCC-EEEEEecCC---CCCCCChHHHHHHHHHHHHHHHhCCC
Confidence 345666655443 24 7899998642 2322222 124555521 1123334444443333 22 24
Q ss_pred CeEEEEcCCch-HHHH--HHHHHH-cCCC
Q 030104 138 DEIIVGCQSGK-RSMM--AATDLL-NGFA 162 (183)
Q Consensus 138 ~~ivv~c~~g~-~s~~--a~~~L~-~G~~ 162 (183)
.+|+|.|..|. |+.. ++..+. .|+.
T Consensus 142 ~~VlVHC~aG~gRTGt~ia~yLm~~~~~s 170 (241)
T 2c46_A 142 ELIGVHCTHGFNRTGFLICAFLVEKMDWS 170 (241)
T ss_dssp EEEEEECSSSSHHHHHHHHHHHHHTTCCC
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHHhCCC
Confidence 78999999886 6552 333334 6653
No 115
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=59.49 E-value=20 Score=23.78 Aligned_cols=93 Identities=17% Similarity=0.206 Sum_probs=51.3
Q ss_pred CCCcccCHHHHHHHHhCCCEEE-EcCChhhHh-ccCCCCceecCcccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCc
Q 030104 70 GVPTSVPVRVAHELLQAGHRYL-DVRTPEEFS-AGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSG 147 (183)
Q Consensus 70 ~~~~~i~~~~~~~~~~~~~~lI-DvR~~~e~~-~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g 147 (183)
+.+..+|...++.+.+.++++. |.+...++. .-.+++.--+.+. .....+..+...+.+..+++|++.++.|
T Consensus 16 Gd~~~lT~~a~~~L~~advv~~~~~~~~~~~l~~~~~~~~~~~~~~------~~~~~~~~~~i~~~~~~G~~V~~l~d~G 89 (117)
T 3hh1_A 16 GNLDDMTFRAVNTLRNAGAIACEDTRRTSILLKHFGIEGKRLVSYH------SFNEERAVRQVIELLEEGSDVALVTDAG 89 (117)
T ss_dssp SCGGGSCHHHHHHHHHCSEEEESCHHHHHHHHHHTTCCSCCEEECC------STTHHHHHHHHHHHHHTTCCEEEEEETT
T ss_pred CCHHHhhHHHHHHHHhCCEEEEecCchHHHHHHHhCCCCCEEeccC------CccHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 3455788888877777777776 444433443 2234443222221 1112234445555555677888888444
Q ss_pred h-----HHHHHHHHHH-cCCCCeeEccc
Q 030104 148 K-----RSMMAATDLL-NGFAGITDIAG 169 (183)
Q Consensus 148 ~-----~s~~a~~~L~-~G~~~v~~l~G 169 (183)
. ........+. .|+ .+.++-|
T Consensus 90 dP~i~~~~~~l~~~~~~~gi-~v~viPG 116 (117)
T 3hh1_A 90 TPAISDPGYTMASAAHAAGL-PVVPVPG 116 (117)
T ss_dssp SCGGGSTTHHHHHHHHHTTC-CEEEEC-
T ss_pred cCeEeccHHHHHHHHHHCCC-cEEEeCC
Confidence 3 3446666777 888 4666654
No 116
>4fak_A Ribosomal RNA large subunit methyltransferase H; alpha/beta methyltransferase rossmann fold, rRNA methylation rRNA, ribosomal protein; HET: SAM PG4; 1.70A {Staphylococcus aureus} PDB: 1vh0_A
Probab=58.23 E-value=15 Score=26.54 Aligned_cols=44 Identities=20% Similarity=0.255 Sum_probs=33.2
Q ss_pred HHHhcCCCCCeEEEEcCCch--HHHHHHHHHH----cCCCCeeEccccHH
Q 030104 129 EVSTRFRKHDEIIVGCQSGK--RSMMAATDLL----NGFAGITDIAGGFA 172 (183)
Q Consensus 129 ~~~~~l~~~~~ivv~c~~g~--~s~~a~~~L~----~G~~~v~~l~GG~~ 172 (183)
.++..++++..+|+.|..|. .|...+..|. .|..++..+-||-.
T Consensus 66 ~il~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~g~~~i~FvIGG~~ 115 (163)
T 4fak_A 66 RILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSN 115 (163)
T ss_dssp HHHHTCCTTSEEEEEEEEEEECCHHHHHHHHHHHHHTTCCEEEEEECBTT
T ss_pred HHHHhCCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCcceEEEEECCC
Confidence 34566788888888888776 5777777775 57778998999854
No 117
>2v1x_A ATP-dependent DNA helicase Q1; DNA strand annealing, mismatch repair, nucleotide-binding, DNA-binding, polymorphism, nuclear protein, ATPase; HET: ADP; 2.00A {Homo sapiens} PDB: 2wwy_A*
Probab=58.04 E-value=14 Score=31.95 Aligned_cols=35 Identities=23% Similarity=0.190 Sum_probs=31.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHH-cCCCCeeEccccH
Q 030104 136 KHDEIIVGCQSGKRSMMAATDLL-NGFAGITDIAGGF 171 (183)
Q Consensus 136 ~~~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~GG~ 171 (183)
++.++||||.+-..+..++..|. .|+ ++..+.||+
T Consensus 266 ~~~~~IVf~~sr~~~e~la~~L~~~g~-~~~~~h~~l 301 (591)
T 2v1x_A 266 KGQSGIIYCFSQKDSEQVTVSLQNLGI-HAGAYHANL 301 (591)
T ss_dssp TTCEEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTS
T ss_pred cCCCeEEEeCcHHHHHHHHHHHHHCCC-CEEEecCCC
Confidence 56789999999999999999999 998 688888886
No 118
>2p6n_A ATP-dependent RNA helicase DDX41; DEAD, structural genomics, structural genomic consortium, SGC, hydrolase; 2.60A {Homo sapiens}
Probab=57.66 E-value=15 Score=26.61 Aligned_cols=34 Identities=18% Similarity=0.193 Sum_probs=29.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHH-cCCCCeeEccccH
Q 030104 137 HDEIIVGCQSGKRSMMAATDLL-NGFAGITDIAGGF 171 (183)
Q Consensus 137 ~~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~GG~ 171 (183)
..+++|||++-..+..++..|. .|+ ++..+.|++
T Consensus 54 ~~~~lVF~~~~~~~~~l~~~L~~~g~-~~~~lhg~~ 88 (191)
T 2p6n_A 54 PPPVLIFAEKKADVDAIHEYLLLKGV-EAVAIHGGK 88 (191)
T ss_dssp CSCEEEECSCHHHHHHHHHHHHHHTC-CEEEECTTS
T ss_pred CCCEEEEECCHHHHHHHHHHHHHcCC-cEEEEeCCC
Confidence 4579999999999999999999 998 577788874
No 119
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=56.55 E-value=23 Score=24.13 Aligned_cols=41 Identities=17% Similarity=0.194 Sum_probs=30.3
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHH-cCCCCeeEccccHHHhh
Q 030104 135 RKHDEIIVGCQSGKRSMMAATDLL-NGFAGITDIAGGFAAWR 175 (183)
Q Consensus 135 ~~~~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~GG~~~W~ 175 (183)
+++-+|.|+.+...-.......|. .||..|..-..|..++.
T Consensus 10 ~k~~rILiVDD~~~~r~~l~~~L~~~G~~~v~~a~~g~~al~ 51 (134)
T 3to5_A 10 NKNMKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALP 51 (134)
T ss_dssp CTTCCEEEECSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHH
T ss_pred CCCCEEEEEeCCHHHHHHHHHHHHHcCCcEEEEECCHHHHHH
Confidence 455678888887665556777888 99977776677777764
No 120
>3eaq_A Heat resistant RNA dependent ATPase; DEAD box RNA helicase, dimer, ATP-binding, helicase, hydrolase, nucleotide-binding; 2.30A {Thermus thermophilus} PDB: 3ear_A 3eas_A
Probab=56.54 E-value=9.6 Score=28.07 Aligned_cols=35 Identities=20% Similarity=0.231 Sum_probs=29.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHH-cCCCCeeEccccH
Q 030104 136 KHDEIIVGCQSGKRSMMAATDLL-NGFAGITDIAGGF 171 (183)
Q Consensus 136 ~~~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~GG~ 171 (183)
...+++|||++-..+..++..|. .|+ .+..+.|++
T Consensus 30 ~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~lhg~~ 65 (212)
T 3eaq_A 30 SPDRAMVFTRTKAETEEIAQGLLRLGH-PAQALHGDL 65 (212)
T ss_dssp CCSCEEEECSSHHHHHHHHHHHHHHTC-CEEEECSSS
T ss_pred CCCeEEEEeCCHHHHHHHHHHHHHcCC-CEEEEECCC
Confidence 35689999999888889999999 998 577888874
No 121
>2l17_A Synarsc, arsenate reductase; alpha/beta sandwich, oxidoreductase; NMR {Synechocystis} PDB: 2l18_A 2l19_A
Probab=54.29 E-value=9.3 Score=26.32 Aligned_cols=35 Identities=23% Similarity=0.293 Sum_probs=25.3
Q ss_pred CeEEEEcCCch-HHHHHHHHHH-cCCCCeeEccccHH
Q 030104 138 DEIIVGCQSGK-RSMMAATDLL-NGFAGITDIAGGFA 172 (183)
Q Consensus 138 ~~ivv~c~~g~-~s~~a~~~L~-~G~~~v~~l~GG~~ 172 (183)
++|+|+|.+.. ||..|...++ ..-+++.+...|+.
T Consensus 5 ~~VLFVC~gN~cRSpmAEa~~~~~~~~~~~v~SAGt~ 41 (134)
T 2l17_A 5 KKVMFVCKRNSCRSQMAEGFAKTLGAGKIAVTSCGLE 41 (134)
T ss_dssp EEEEEECCSSTHHHHHHHHHHHHHSBTTEEEEEECCT
T ss_pred CEEEEEeCCchHHHHHHHHHHHHHcCCCEEEEcccCC
Confidence 37999998765 8988888888 54345666666654
No 122
>3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4; 1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A* 3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A
Probab=53.92 E-value=37 Score=27.30 Aligned_cols=79 Identities=13% Similarity=0.148 Sum_probs=42.5
Q ss_pred CHHHHHHHHh----CCCEEEEcCChhhHhccCCCCc-eecCcccccCCCCCCCHHHHHHHHhc----C--CCCCeEEEEc
Q 030104 76 PVRVAHELLQ----AGHRYLDVRTPEEFSAGHATGA-INVPYMYRVGSGMTKNLKFVEEVSTR----F--RKHDEIIVGC 144 (183)
Q Consensus 76 ~~~~~~~~~~----~~~~lIDvR~~~e~~~ghIpgA-vnip~~~~~~~~~~~~~~~~~~~~~~----l--~~~~~ivv~c 144 (183)
+.+++...++ +.+.|++.+++..|....+.+. .++|+.+ ....+.+.+...... + +++..|+|.|
T Consensus 51 ~i~dv~~~L~~~h~~~y~V~NL~sE~~Yd~~~f~~~v~~~p~pD----~~~P~~~~l~~~~~~v~~~l~~~~~~~v~vHC 126 (339)
T 3v0d_A 51 PIGEVSRFFKTKHPDKFRIYNLCSERGYDETKFDNHVYRVMIDD----HNVPTLVDLLKFIDDAKVWMTSDPDHVIAIHS 126 (339)
T ss_dssp EHHHHHHHHHHHSTTCEEEEEEETTCCCCGGGGTTCEEEEEECT----TSCCCHHHHHHHHHHHHHHHHTCTTCEEEEEC
T ss_pred CHHHHHHHHHHhCCCceEEEECCCCCCCChHHcCCeEEEeccCC----CCCCCHHHHHHHHHHHHHHHhcCCCCeEEEEe
Confidence 4455555553 3489999987666665444332 4566542 222233333222221 2 3457899999
Q ss_pred CCch-HHH-HHHHHHH
Q 030104 145 QSGK-RSM-MAATDLL 158 (183)
Q Consensus 145 ~~g~-~s~-~a~~~L~ 158 (183)
..|. |+. .++..|.
T Consensus 127 ~~G~gRtg~~ia~~Li 142 (339)
T 3v0d_A 127 KGGKGRTGTLVSSWLL 142 (339)
T ss_dssp SSSSHHHHHHHHHHHH
T ss_pred CCCCcchHHHHHHHHH
Confidence 8775 554 3444444
No 123
>3rh0_A Arsenate reductase; oxidoreductase; 1.72A {Corynebacterium glutamicum}
Probab=52.57 E-value=7.1 Score=27.60 Aligned_cols=35 Identities=17% Similarity=0.182 Sum_probs=25.4
Q ss_pred CeEEEEcCCch-HHHHHHHHHH-cCCCCeeEccccHH
Q 030104 138 DEIIVGCQSGK-RSMMAATDLL-NGFAGITDIAGGFA 172 (183)
Q Consensus 138 ~~ivv~c~~g~-~s~~a~~~L~-~G~~~v~~l~GG~~ 172 (183)
.+|+|+|.+.. ||..|...|+ +.-+++.+...|+.
T Consensus 21 ~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt~ 57 (148)
T 3rh0_A 21 KSVLFVCVGNGGKSQMAAALAQKYASDSVEIHSAGTK 57 (148)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHCCTTSEEEEEESS
T ss_pred CEEEEECCCchhHHHHHHHHHHHhcCCCEEEEecccC
Confidence 57999998765 9998888888 54456666655543
No 124
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=51.53 E-value=3.3 Score=30.49 Aligned_cols=38 Identities=26% Similarity=0.292 Sum_probs=27.3
Q ss_pred CCeEEEEcCCch-HHHHHHHHHH-c----CCCCeeEccccHHHhh
Q 030104 137 HDEIIVGCQSGK-RSMMAATDLL-N----GFAGITDIAGGFAAWR 175 (183)
Q Consensus 137 ~~~ivv~c~~g~-~s~~a~~~L~-~----G~~~v~~l~GG~~~W~ 175 (183)
..+|+|+|.+.. ||..|...|+ . |. ++.+...|+.+|.
T Consensus 34 ~~~VLFVC~gNiCRSpmAEai~r~~~~~~g~-~~~v~SAGt~~~~ 77 (184)
T 4etn_A 34 SMDIIFVCTGNTSRSPMAEALFKSIAEREGL-NVNVRSAGVFASP 77 (184)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHHTC-CEEEEEEETTCCT
T ss_pred CCEEEEECCCchhHHHHHHHHHHHHHHhcCC-cEEEEeeecCCcC
Confidence 358999998765 8887776665 2 42 5777778887774
No 125
>3i32_A Heat resistant RNA dependent ATPase; RNA helicase, dimer, RNA recognition motif, ATP-BIND helicase, nucleotide-binding; 2.80A {Thermus thermophilus}
Probab=49.56 E-value=19 Score=28.31 Aligned_cols=43 Identities=16% Similarity=0.172 Sum_probs=32.8
Q ss_pred HHHHHhcCCCCCeEEEEcCCchHHHHHHHHHH-cCCCCeeEccccH
Q 030104 127 VEEVSTRFRKHDEIIVGCQSGKRSMMAATDLL-NGFAGITDIAGGF 171 (183)
Q Consensus 127 ~~~~~~~l~~~~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~GG~ 171 (183)
+...+... ...+++|||++-..+..++..|. .|+ .+..+.|++
T Consensus 19 L~~ll~~~-~~~~~LVF~~t~~~~~~l~~~L~~~g~-~~~~lhg~l 62 (300)
T 3i32_A 19 LSDLLYVA-SPDRAMVFTRTKAETEEIAQGLLRLGH-PAQALHGDM 62 (300)
T ss_dssp HHHHHHHH-CCSSEEEECSSHHHHHHHHHHHHTTTC-CEEEECSCC
T ss_pred HHHHHHhc-CCCCEEEEECCHHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence 44444333 36789999999888889999999 998 577788874
No 126
>3kwp_A Predicted methyltransferase; putative methyltransferase, MCSG, STRU genomics, PSI-2, protein structure initiative; 2.29A {Lactobacillus brevis atcc 367}
Probab=49.43 E-value=53 Score=25.77 Aligned_cols=105 Identities=10% Similarity=0.169 Sum_probs=61.3
Q ss_pred CCCcccCHHHHHHHHhCCCEEE-EcCChhhHhccCCCCceecCcccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCch
Q 030104 70 GVPTSVPVRVAHELLQAGHRYL-DVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGK 148 (183)
Q Consensus 70 ~~~~~i~~~~~~~~~~~~~~lI-DvR~~~e~~~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~ 148 (183)
+.+..+|...+..+.+.++++. |.|...+...-.-++.--+++.. ....+....+.+.+..+++|+++++.|.
T Consensus 26 G~~~~lT~rA~~~L~~aDvI~~edtr~~~~lL~~~~~~~~~i~~~~------~~~~~~~~~li~~l~~G~~Va~lsdaGd 99 (296)
T 3kwp_A 26 GNLDDMTFRAVKTLTAVDLIAAEDTRNTQKLLNHFEITTKQISFHE------HNTQERIPQLIAKLKQGMQIAQVSDAGM 99 (296)
T ss_dssp SCGGGCCHHHHHHHHHSSEEEESCHHHHHHHHHHTTCCCEEEECST------TTHHHHHHHHHHHHHTTCEEEEECSSBC
T ss_pred CCccchhhHHHHHHhHhhhhhhhccccHHHHhhheeeeeeeeehhh------cchhhHhHHHHHHHhcCceEEEeccCCC
Confidence 3456788888888888888888 77754443321111222232210 0112344555555566788999886665
Q ss_pred -----HHHHHHHHHH-cCCCCeeEcccc---HHHhhhCCCCC
Q 030104 149 -----RSMMAATDLL-NGFAGITDIAGG---FAAWRQNGLPT 181 (183)
Q Consensus 149 -----~s~~a~~~L~-~G~~~v~~l~GG---~~~W~~~g~pv 181 (183)
........+. .|+ .|.++-|= ..+....|.|.
T Consensus 100 P~i~~~g~~lv~~~~~~gi-~v~viPGiSA~~aA~a~~Glp~ 140 (296)
T 3kwp_A 100 PSISDPGHELVNACIDAHI-PVVPLPGANAGLTALIASGLAP 140 (296)
T ss_dssp TTSSHHHHHHHHHHHHTTC-CEEECCCCCHHHHHHHHHSSCC
T ss_pred CCCCCCchHHHHHHHHcCC-CeeeCCCcccchHHHHhccCCC
Confidence 4556777777 888 57777762 33444455554
No 127
>1s4d_A Uroporphyrin-III C-methyltransferase; tetrapyrrole biosynthesis, cobalamin, SAM, SAH, uroporphyrin methyltransferase; HET: SAH; 2.70A {Pseudomonas denitrificans} SCOP: c.90.1.1
Probab=48.27 E-value=80 Score=24.27 Aligned_cols=108 Identities=20% Similarity=0.183 Sum_probs=57.6
Q ss_pred CCCcccCHHHHHHHHhCCCEEEEcCChhhHhccCCC-CceecCcccccCCCCCCCHHHHHH-HHhcCCCCCeEEEEcCCc
Q 030104 70 GVPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHAT-GAINVPYMYRVGSGMTKNLKFVEE-VSTRFRKHDEIIVGCQSG 147 (183)
Q Consensus 70 ~~~~~i~~~~~~~~~~~~~~lIDvR~~~e~~~ghIp-gAvnip~~~~~~~~~~~~~~~~~~-~~~~l~~~~~ivv~c~~g 147 (183)
+.+..+|...++.+.+.++++.|.+...+... +++ ++.-++...... ......+.+.+ +.+....+++|++.+. |
T Consensus 25 Gd~~lLTl~A~~~L~~ADvV~~d~~~~~~ll~-~~~~~~~~~~~~k~~~-~~~~~~~~i~~~l~~~~~~G~~Vv~L~~-G 101 (280)
T 1s4d_A 25 GDPGLLTLHAANALRQADVIVHDALVNEDCLK-LARPGAVLEFAGKRGG-KPSPKQRDISLRLVELARAGNRVLRLKG-G 101 (280)
T ss_dssp SCTTSSBHHHHHHHHHCSEEEECSCSCTTGGG-GSSTTCCEEECSCCC---CCCCHHHHHHHHHHHHHTTCCEEEEES-B
T ss_pred CCHHHHHHHHHHHHHhCCEEEEcCCCCHHHHH-hccCCCEEEecccccc-ccccCHHHHHHHHHHHHhCCCeEEEEcC-C
Confidence 35567888888888888888888876544332 332 332222211100 01112333333 3333445677877776 3
Q ss_pred h-----HHHHHHHHHH-cCCCCeeEccc---cHHHhhhCCCCC
Q 030104 148 K-----RSMMAATDLL-NGFAGITDIAG---GFAAWRQNGLPT 181 (183)
Q Consensus 148 ~-----~s~~a~~~L~-~G~~~v~~l~G---G~~~W~~~g~pv 181 (183)
. +.......+. .|+ .+.++-| -..+....|.|+
T Consensus 102 DP~i~g~g~~l~~~l~~~gi-~veviPGiSs~~aa~a~~Gipl 143 (280)
T 1s4d_A 102 DPFVFGRGGEEALTLVEHQV-PFRIVPGITAGIGGLAYAGIPV 143 (280)
T ss_dssp CTTSSSSHHHHHHHHHTTTC-CEEEECCCCTTTHHHHHTTCCS
T ss_pred CCccccCHHHHHHHHHHCCC-CEEEEcCccHHHHHHHHcCCCc
Confidence 3 4556677777 887 4666665 123334445554
No 128
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B
Probab=47.86 E-value=18 Score=24.92 Aligned_cols=35 Identities=20% Similarity=0.041 Sum_probs=25.2
Q ss_pred CeEEEEcCCch-HHHHHHHHHH-cCCCCeeEccccHH
Q 030104 138 DEIIVGCQSGK-RSMMAATDLL-NGFAGITDIAGGFA 172 (183)
Q Consensus 138 ~~ivv~c~~g~-~s~~a~~~L~-~G~~~v~~l~GG~~ 172 (183)
++|+|+|.+.. ||..|...|+ ..-.++.+...|+.
T Consensus 4 ~~VLFVC~gN~cRSpmAEai~~~~~~~~~~v~SAGt~ 40 (139)
T 1jl3_A 4 KIIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGIE 40 (139)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHSCTTEEEEEEESS
T ss_pred CeEEEEcCCchHHHHHHHHHHHHhCCCCEEEEcCcCC
Confidence 47999998765 9998888888 43345666666654
No 129
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=47.39 E-value=15 Score=24.42 Aligned_cols=24 Identities=21% Similarity=0.252 Sum_probs=18.0
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHH
Q 030104 135 RKHDEIIVGCQSGKRSMMAATDLL 158 (183)
Q Consensus 135 ~~~~~ivv~c~~g~~s~~a~~~L~ 158 (183)
.+..+|+++|.+|..+...+..++
T Consensus 4 ~~~mkIlL~C~aGmSTsllv~km~ 27 (108)
T 3nbm_A 4 SKELKVLVLCAGSGTSAQLANAIN 27 (108)
T ss_dssp -CCEEEEEEESSSSHHHHHHHHHH
T ss_pred ccCceEEEECCCCCCHHHHHHHHH
Confidence 355689999999997776666664
No 130
>3ohg_A Uncharacterized protein from DUF2233 family; structural genomics, unknown function, joint center for STRU genomics, JCSG; HET: MSE; 1.80A {Bacteroides ovatus}
Probab=47.34 E-value=18 Score=28.47 Aligned_cols=25 Identities=24% Similarity=0.175 Sum_probs=21.3
Q ss_pred chHHHHHHHHHH-cCCCCeeEccccH
Q 030104 147 GKRSMMAATDLL-NGFAGITDIAGGF 171 (183)
Q Consensus 147 g~~s~~a~~~L~-~G~~~v~~l~GG~ 171 (183)
|..-...+..|+ +|..++.+||||-
T Consensus 218 G~tl~ela~~~~~lG~~~AlnLDGGg 243 (285)
T 3ohg_A 218 GLTLPHLATMMKAVGCYNAINLDGGG 243 (285)
T ss_dssp CBCHHHHHHHHHHHTCSEEEECCCGG
T ss_pred CCCHHHHHHHHHHcCCCeEEECCCCc
Confidence 455678999999 9999999999983
No 131
>3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2 domain, hydrolase; 2.20A {Bos taurus}
Probab=44.75 E-value=1.2e+02 Score=24.57 Aligned_cols=71 Identities=8% Similarity=0.186 Sum_probs=39.3
Q ss_pred CCCEEEEcCChhhHhccCCCCc-eecCcccccCCCCCCCHHHHHHHHhc----C--CCCCeEEEEcCCch-HHH-HHHHH
Q 030104 86 AGHRYLDVRTPEEFSAGHATGA-INVPYMYRVGSGMTKNLKFVEEVSTR----F--RKHDEIIVGCQSGK-RSM-MAATD 156 (183)
Q Consensus 86 ~~~~lIDvR~~~e~~~ghIpgA-vnip~~~~~~~~~~~~~~~~~~~~~~----l--~~~~~ivv~c~~g~-~s~-~a~~~ 156 (183)
+.+.|+++++ ..|....+.+. +++|+.+ +...+.+.+...... + +++..|+|.|..|. |+. .++..
T Consensus 62 ~~y~V~NLse-~~Yd~~~f~~~V~~~~~pD----~~~P~l~~l~~~~~~i~~~l~~~~~~~v~VHC~aG~GRtg~~ia~~ 136 (361)
T 3n0a_A 62 DHYTVYNLSP-KSYRTAKFHSRVSECSWPI----RQAPSLHNLFAVCRNMYNWLLQNPKNVCVVHCLDGRAASSILVGAM 136 (361)
T ss_dssp TCEEEEECSS-SCCGGGSCGGGEEECCCCS----SSCCCHHHHHHHHHHHHHHHHHCTTCEEEEEECSCTHHHHHHHHHH
T ss_pred CeEEEEECCC-CCCChhhcCCcEEEeecCC----CCCCCHHHHHHHHHHHHHHHhcCCCCeEEEEeCCCCccHHHHHHHH
Confidence 4589999965 56776655554 3566542 222233333222221 1 45568999999775 554 44444
Q ss_pred HH-cCC
Q 030104 157 LL-NGF 161 (183)
Q Consensus 157 L~-~G~ 161 (183)
|. .|.
T Consensus 137 Li~~~~ 142 (361)
T 3n0a_A 137 FIFCNL 142 (361)
T ss_dssp HHHTTS
T ss_pred HHHhcC
Confidence 44 443
No 132
>1xti_A Probable ATP-dependent RNA helicase P47; alpha-beta fold, gene regulation; 1.95A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 1xtj_A* 1xtk_A
Probab=44.39 E-value=42 Score=26.34 Aligned_cols=42 Identities=17% Similarity=0.274 Sum_probs=32.5
Q ss_pred HHHHhcCCCCCeEEEEcCCchHHHHHHHHHH-cCCCCeeEccccH
Q 030104 128 EEVSTRFRKHDEIIVGCQSGKRSMMAATDLL-NGFAGITDIAGGF 171 (183)
Q Consensus 128 ~~~~~~l~~~~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~GG~ 171 (183)
....... +..+++|||++-..+..++..|. .|+ .+..+.|++
T Consensus 242 ~~~l~~~-~~~~~lvf~~~~~~~~~l~~~L~~~~~-~~~~~~~~~ 284 (391)
T 1xti_A 242 FDLLDVL-EFNQVVIFVKSVQRCIALAQLLVEQNF-PAIAIHRGM 284 (391)
T ss_dssp HHHHHHS-CCSEEEEECSCHHHHHHHHHHHHHTTC-CEEEECTTS
T ss_pred HHHHHhc-CCCcEEEEeCcHHHHHHHHHHHHhCCC-cEEEEeCCC
Confidence 3334333 55789999999888989999999 998 577788874
No 133
>2d7d_A Uvrabc system protein B; helicase, protein-DNA-ADP ternary complex, hydrolase/DNA complex; HET: ADP; 2.10A {Bacillus subtilis} PDB: 2nmv_A* 2fdc_A* 1t5l_A 3uwx_B 1d9z_A* 1d9x_A 2d7d_B* 2nmv_B*
Probab=43.50 E-value=34 Score=30.04 Aligned_cols=43 Identities=16% Similarity=0.239 Sum_probs=33.5
Q ss_pred HHHHhcCCCCCeEEEEcCCchHHHHHHHHHH-cCCCCeeEccccH
Q 030104 128 EEVSTRFRKHDEIIVGCQSGKRSMMAATDLL-NGFAGITDIAGGF 171 (183)
Q Consensus 128 ~~~~~~l~~~~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~GG~ 171 (183)
..+...+..+.+++|+|.+-.++..++..|. .|+ ++..+.|++
T Consensus 436 ~~l~~~~~~~~~vlVf~~t~~~ae~L~~~L~~~gi-~~~~lh~~~ 479 (661)
T 2d7d_A 436 GEIQARIERNERVLVTTLTKKMSEDLTDYLKEIGI-KVNYLHSEI 479 (661)
T ss_dssp HHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTC
T ss_pred HHHHHHHhcCCeEEEEECCHHHHHHHHHHHHhcCC-CeEEEeCCC
Confidence 3333334567799999999999999999999 998 577777774
No 134
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=43.38 E-value=23 Score=24.13 Aligned_cols=36 Identities=19% Similarity=-0.005 Sum_probs=25.8
Q ss_pred CeEEEEcCCch-HHHHHHHHHH-cCCCCeeEccccHHH
Q 030104 138 DEIIVGCQSGK-RSMMAATDLL-NGFAGITDIAGGFAA 173 (183)
Q Consensus 138 ~~ivv~c~~g~-~s~~a~~~L~-~G~~~v~~l~GG~~~ 173 (183)
++|+|+|.+.. ||..|...++ ..-.++.+...|...
T Consensus 4 ~~VLFVC~gN~cRSpmAEa~~~~~~~~~~~v~SAGt~~ 41 (131)
T 1jf8_A 4 KTIYFISTGNSARSQMAEGWGKEILGEGWNVYSAGIET 41 (131)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHSTTTEEEEEEESSC
T ss_pred CEEEEEcCCcchHHHHHHHHHHHhcCCCEEEEcCcCCC
Confidence 47999998765 9998888888 432466666666543
No 135
>1wyz_A Putative S-adenosylmethionine-dependent methyltra; northeast structural genomics consortium, BTR28, methyltrans PSI; 2.50A {Bacteroides thetaiotaomicron} SCOP: c.90.1.1
Probab=43.18 E-value=43 Score=25.18 Aligned_cols=94 Identities=10% Similarity=-0.012 Sum_probs=48.1
Q ss_pred ccCHHHHHHHHhCCCEEE-EcCChhhHhccCCCCceecCcccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCch----
Q 030104 74 SVPVRVAHELLQAGHRYL-DVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGK---- 148 (183)
Q Consensus 74 ~i~~~~~~~~~~~~~~lI-DvR~~~e~~~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~---- 148 (183)
.+|...++.+.+.++++. |.|...+.....-++..-+.. ...........+..+.+.+.+..+++|++.|.+|.
T Consensus 20 LlTlrA~~~L~~aDvI~~~~~~~~~~ll~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~G~~Va~ls~~GdP~i~ 98 (242)
T 1wyz_A 20 VLPSYNTEIIRGIRHFIVEDVRSARRFLKKVDREIDIDSL-TFYPLNKHTSPEDISGYLKPLAGGASMGVISEAGCPAVA 98 (242)
T ss_dssp HSCTHHHHHHTTCCEEEESCHHHHHHHHHHHCSSSCTTCC-CCEECCSSCCHHHHHHHHHHHHTTCCEEEECC-------
T ss_pred ccCHHHHHHHHhCCEEEEeCCcchHHHHHhcCCCCceeee-eeecccccCHHHHHHHHHHHHHcCCEEEEEecCCCCccc
Confidence 377777777766777777 655444432211111110110 00111111223445555555666788999986444
Q ss_pred -HHHHHHHHHH-cCCCCeeEccc
Q 030104 149 -RSMMAATDLL-NGFAGITDIAG 169 (183)
Q Consensus 149 -~s~~a~~~L~-~G~~~v~~l~G 169 (183)
+....+..+. .|+ .+.++-|
T Consensus 99 ~~g~~l~~~l~~~gi-~vevIPG 120 (242)
T 1wyz_A 99 DPGADVVAIAQRQKL-KVIPLVG 120 (242)
T ss_dssp CHHHHHHHHHHHTTC-CEEECCC
T ss_pred CcHHHHHHHHHHCCC-CEEEeCc
Confidence 3445666677 887 4777766
No 136
>1to0_A Hypothetical UPF0247 protein YYDA; structural genomics, unknown function, PSI, protein structure initiative; 2.50A {Bacillus subtilis} SCOP: c.116.1.3
Probab=43.04 E-value=33 Score=24.72 Aligned_cols=46 Identities=20% Similarity=0.244 Sum_probs=31.6
Q ss_pred HHHHhcCCCCCeEEEEcCCch--HHHHHHHHHH----cCCCCeeEccccHHH
Q 030104 128 EEVSTRFRKHDEIIVGCQSGK--RSMMAATDLL----NGFAGITDIAGGFAA 173 (183)
Q Consensus 128 ~~~~~~l~~~~~ivv~c~~g~--~s~~a~~~L~----~G~~~v~~l~GG~~~ 173 (183)
+.+.+.++++.-+|+.|..|. .|...+..|. .|..++..+-||-.+
T Consensus 61 ~~il~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~G~~~i~FvIGGa~G 112 (167)
T 1to0_A 61 DRILSKISPDAHVIALAIEGKMKTSEELADTIDKLATYGKSKVTFVIGGSLG 112 (167)
T ss_dssp HHHHTTSCTTSEEEEEEEEEEECCHHHHHHHHHHHHTTTCCEEEEEECCSSC
T ss_pred HHHHhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCceEEEEEECCCC
Confidence 344555666655888887776 6777777775 576778888888543
No 137
>1p8a_A Protein tyrosine phosphatase; hydrolase; NMR {Tritrichomonas foetus} SCOP: c.44.1.1
Probab=42.41 E-value=2.9 Score=29.38 Aligned_cols=37 Identities=8% Similarity=-0.041 Sum_probs=26.1
Q ss_pred CeEEEEcCCch-HHHHHHHHHH-cCCCCeeEccccHHHh
Q 030104 138 DEIIVGCQSGK-RSMMAATDLL-NGFAGITDIAGGFAAW 174 (183)
Q Consensus 138 ~~ivv~c~~g~-~s~~a~~~L~-~G~~~v~~l~GG~~~W 174 (183)
.+|+|+|.+.. ||..|...++ ..-+++.+...|...|
T Consensus 5 ~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt~~~ 43 (146)
T 1p8a_A 5 KAVLFVCLGNICRSPACEGICRDMVGDKLIIDSAATSGF 43 (146)
T ss_dssp CCEEEESSSSCSSSTTHHHHHHHHHSSCSSCEEECSCTT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHhcCCCEEEEeeecCCc
Confidence 47999998665 8887777777 4333455666777766
No 138
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=42.37 E-value=39 Score=26.30 Aligned_cols=82 Identities=17% Similarity=0.165 Sum_probs=49.4
Q ss_pred CHHHHHHHHh----CC-CEEEEcCChhhHhccCCCCc-----eecCcccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcC
Q 030104 76 PVRVAHELLQ----AG-HRYLDVRTPEEFSAGHATGA-----INVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQ 145 (183)
Q Consensus 76 ~~~~~~~~~~----~~-~~lIDvR~~~e~~~ghIpgA-----vnip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~ 145 (183)
+.+++.++.+ -+ -++++|.+.+|-....--|+ -|-.+ ..+..+.+....+...++.+ +++++.
T Consensus 154 ~~~~l~~l~~~a~~lGl~~lvevh~~eEl~~A~~~ga~iIGinnr~l-----~t~~~dl~~~~~L~~~ip~~--~~vIae 226 (272)
T 3tsm_A 154 DDDLAKELEDTAFALGMDALIEVHDEAEMERALKLSSRLLGVNNRNL-----RSFEVNLAVSERLAKMAPSD--RLLVGE 226 (272)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHTTSCCSEEEEECBCT-----TTCCBCTHHHHHHHHHSCTT--SEEEEE
T ss_pred CHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCCEEEECCCCC-----ccCCCChHHHHHHHHhCCCC--CcEEEE
Confidence 4455554432 24 57889988888753322222 22222 12223446666777777643 678889
Q ss_pred CchHHHHHHHHHH-cCCCCe
Q 030104 146 SGKRSMMAATDLL-NGFAGI 164 (183)
Q Consensus 146 ~g~~s~~a~~~L~-~G~~~v 164 (183)
+|..+..-+..+. .|++-|
T Consensus 227 sGI~t~edv~~l~~~Ga~gv 246 (272)
T 3tsm_A 227 SGIFTHEDCLRLEKSGIGTF 246 (272)
T ss_dssp SSCCSHHHHHHHHTTTCCEE
T ss_pred CCCCCHHHHHHHHHcCCCEE
Confidence 9998777777888 999644
No 139
>1s2m_A Putative ATP-dependent RNA helicase DHH1; ATP-binding, RNA-binding, RNA binding protein; 2.10A {Saccharomyces cerevisiae} SCOP: c.37.1.19 c.37.1.19 PDB: 2wax_A* 2way_A
Probab=41.67 E-value=35 Score=27.00 Aligned_cols=42 Identities=14% Similarity=0.272 Sum_probs=32.4
Q ss_pred HHHHhcCCCCCeEEEEcCCchHHHHHHHHHH-cCCCCeeEccccH
Q 030104 128 EEVSTRFRKHDEIIVGCQSGKRSMMAATDLL-NGFAGITDIAGGF 171 (183)
Q Consensus 128 ~~~~~~l~~~~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~GG~ 171 (183)
....... ...+++|||++-..+..++..|. .|+ .+..+.|++
T Consensus 250 ~~~~~~~-~~~~~lVf~~~~~~~~~l~~~L~~~~~-~~~~~~~~~ 292 (400)
T 1s2m_A 250 NTLFSKL-QINQAIIFCNSTNRVELLAKKITDLGY-SCYYSHARM 292 (400)
T ss_dssp HHHHHHS-CCSEEEEECSSHHHHHHHHHHHHHHTC-CEEEECTTS
T ss_pred HHHHhhc-CCCcEEEEEecHHHHHHHHHHHHhcCC-CeEEecCCC
Confidence 3333333 45689999999888889999999 998 577788875
No 140
>1wp9_A ATP-dependent RNA helicase, putative; ATPase, DNA replication, DNA repair, DNA recombina hydrolase; 2.90A {Pyrococcus furiosus} SCOP: c.37.1.19 c.37.1.19
Probab=41.54 E-value=38 Score=27.08 Aligned_cols=34 Identities=18% Similarity=0.331 Sum_probs=29.2
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHH-cCCCCeeEccc
Q 030104 135 RKHDEIIVGCQSGKRSMMAATDLL-NGFAGITDIAG 169 (183)
Q Consensus 135 ~~~~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~G 169 (183)
.++.+++|+|++-..+..++..|. .|+ ++..+.|
T Consensus 359 ~~~~k~lVF~~~~~~~~~l~~~L~~~~~-~~~~~~g 393 (494)
T 1wp9_A 359 KQNSKIIVFTNYRETAKKIVNELVKDGI-KAKRFVG 393 (494)
T ss_dssp CTTCCEEEECSCHHHHHHHHHHHHHTTC-CEEEECC
T ss_pred CCCCeEEEEEccHHHHHHHHHHHHHcCC-CcEEEec
Confidence 467899999999888889999999 998 5777888
No 141
>2yjt_D ATP-dependent RNA helicase SRMB, regulator of ribonuclease activity A; hydrolase inhibitor-hydrolase complex, DEAD box RNA helicase; 2.90A {Escherichia coli}
Probab=46.88 E-value=5.8 Score=28.04 Aligned_cols=36 Identities=19% Similarity=0.128 Sum_probs=29.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHH-cCCCCeeEccccHH
Q 030104 136 KHDEIIVGCQSGKRSMMAATDLL-NGFAGITDIAGGFA 172 (183)
Q Consensus 136 ~~~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~GG~~ 172 (183)
.+.++||||++-..+..++..|. .|+ .+..+.|++.
T Consensus 29 ~~~~~iVF~~~~~~~~~l~~~L~~~~~-~~~~~~g~~~ 65 (170)
T 2yjt_D 29 EATRSIVFVRKRERVHELANWLREAGI-NNCYLEGEMV 65 (170)
Confidence 34689999999888888999998 888 5667788764
No 142
>2wmy_A WZB, putative acid phosphatase WZB; hydrolase; 2.21A {Escherichia coli}
Probab=40.58 E-value=16 Score=25.61 Aligned_cols=35 Identities=26% Similarity=0.209 Sum_probs=25.1
Q ss_pred CeEEEEcCCch-HHHHHHHHHH-cCCCCeeEccccHHH
Q 030104 138 DEIIVGCQSGK-RSMMAATDLL-NGFAGITDIAGGFAA 173 (183)
Q Consensus 138 ~~ivv~c~~g~-~s~~a~~~L~-~G~~~v~~l~GG~~~ 173 (183)
++|+|+|.+.. ||..|...|+ .. .++.+...|+.+
T Consensus 9 ~~VLFVC~gN~cRSpmAEal~r~~~-~~~~v~SAGt~~ 45 (150)
T 2wmy_A 9 DSILVICTGNICRSPIGERLLRRLL-PSKKINSAGVGA 45 (150)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHC-TTSEEEEEETTC
T ss_pred CEEEEEcCCchHHHHHHHHHHHHhc-CCCEEEeccccC
Confidence 47999998765 9998888888 53 246666666643
No 143
>1c4o_A DNA nucleotide excision repair enzyme UVRB; uvrabc, helicase, hypertherm protein, replication; HET: DNA BOG; 1.50A {Thermus thermophilus} SCOP: c.37.1.19 c.37.1.19 PDB: 1d2m_A*
Probab=40.50 E-value=31 Score=30.28 Aligned_cols=37 Identities=8% Similarity=0.081 Sum_probs=31.1
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHH-cCCCCeeEccccH
Q 030104 134 FRKHDEIIVGCQSGKRSMMAATDLL-NGFAGITDIAGGF 171 (183)
Q Consensus 134 l~~~~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~GG~ 171 (183)
+.++.+++|+|.+-..+..++..|. .|+ ++..+.|++
T Consensus 436 ~~~~~~vlVf~~t~~~ae~L~~~L~~~gi-~~~~lh~~~ 473 (664)
T 1c4o_A 436 AARGERTLVTVLTVRMAEELTSFLVEHGI-RARYLHHEL 473 (664)
T ss_dssp HHTTCEEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTC
T ss_pred HhcCCEEEEEECCHHHHHHHHHHHHhcCC-CceeecCCC
Confidence 3467799999999999999999999 998 577777774
No 144
>1oyw_A RECQ helicase, ATP-dependent DNA helicase; winged helix, helix-turn-helix, ATP binding, Zn(2+) binding, hydrolase; 1.80A {Escherichia coli} SCOP: a.4.5.43 c.37.1.19 c.37.1.19 PDB: 1oyy_A*
Probab=40.45 E-value=23 Score=29.96 Aligned_cols=36 Identities=19% Similarity=0.297 Sum_probs=30.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHH-cCCCCeeEccccHH
Q 030104 136 KHDEIIVGCQSGKRSMMAATDLL-NGFAGITDIAGGFA 172 (183)
Q Consensus 136 ~~~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~GG~~ 172 (183)
++.++||||++-..+..++..|. .|+ ++..+.||+.
T Consensus 235 ~~~~~IVf~~sr~~~e~l~~~L~~~g~-~~~~~h~~l~ 271 (523)
T 1oyw_A 235 RGKSGIIYCNSRAKVEDTAARLQSKGI-SAAAYHAGLE 271 (523)
T ss_dssp TTCCEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTSC
T ss_pred CCCcEEEEeCCHHHHHHHHHHHHHCCC-CEEEecCCCC
Confidence 56789999999888999999999 998 6888888863
No 145
>2wja_A Putative acid phosphatase WZB; hydrolase; 2.50A {Escherichia coli}
Probab=38.64 E-value=17 Score=26.08 Aligned_cols=35 Identities=26% Similarity=0.209 Sum_probs=25.6
Q ss_pred CeEEEEcCCch-HHHHHHHHHH-cCCCCeeEccccHHH
Q 030104 138 DEIIVGCQSGK-RSMMAATDLL-NGFAGITDIAGGFAA 173 (183)
Q Consensus 138 ~~ivv~c~~g~-~s~~a~~~L~-~G~~~v~~l~GG~~~ 173 (183)
.+|+|+|.+.. ||..|...|+ .. .++.+...|+.+
T Consensus 27 ~~VLFVCtgNicRSpmAEal~r~~~-~~~~v~SAGt~~ 63 (168)
T 2wja_A 27 DSILVICTGNICRSPIGERLLRRLL-PSKKINSAGVGA 63 (168)
T ss_dssp SEEEEEESSSSSHHHHHHHHHHHHS-TTSEEEEEETTC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHhc-CCeEEEeeecCC
Confidence 48999998765 9998888888 54 246666667644
No 146
>3pey_A ATP-dependent RNA helicase DBP5; RECA, DEAD-BOX, ATPase, helicase, mRNA-export, nuclear pore, hydrolase-RNA complex; HET: ADP; 1.40A {Saccharomyces cerevisiae} PDB: 3pew_A* 3pex_A* 3pez_A* 3rrm_A* 3rrn_A* 2kbe_A 3gfp_A 2kbf_A 3pev_A* 3peu_A*
Probab=38.24 E-value=54 Score=25.58 Aligned_cols=35 Identities=14% Similarity=0.173 Sum_probs=30.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHH-cCCCCeeEccccH
Q 030104 136 KHDEIIVGCQSGKRSMMAATDLL-NGFAGITDIAGGF 171 (183)
Q Consensus 136 ~~~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~GG~ 171 (183)
.+.+++|||++-..+..++..|. .|+ ++..+.|++
T Consensus 242 ~~~~~lvf~~~~~~~~~l~~~l~~~~~-~~~~~~~~~ 277 (395)
T 3pey_A 242 TIGSSIIFVATKKTANVLYGKLKSEGH-EVSILHGDL 277 (395)
T ss_dssp TSSEEEEECSCHHHHHHHHHHHHHTTC-CCEEECTTS
T ss_pred cCCCEEEEeCCHHHHHHHHHHHHhcCC-cEEEeCCCC
Confidence 45789999999888889999999 998 677888874
No 147
>1o6d_A Hypothetical UPF0247 protein TM0844; structural genomics, unknown function; 1.66A {Thermotoga maritima} SCOP: c.116.1.3
Probab=38.20 E-value=42 Score=24.07 Aligned_cols=47 Identities=26% Similarity=0.244 Sum_probs=32.6
Q ss_pred HHHHhcCCCCCeEEEEcCCch--HHHHHHHHHH----cCCCCeeEccccHHHhh
Q 030104 128 EEVSTRFRKHDEIIVGCQSGK--RSMMAATDLL----NGFAGITDIAGGFAAWR 175 (183)
Q Consensus 128 ~~~~~~l~~~~~ivv~c~~g~--~s~~a~~~L~----~G~~~v~~l~GG~~~W~ 175 (183)
+...+.++++.-+|+.|..|. .|...+..|. .| .++..+-||-.++.
T Consensus 56 ~~il~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~G-~~i~FvIGGa~Gl~ 108 (163)
T 1o6d_A 56 EDLTNRILPGSFVMVMDKRGEEVSSEEFADFLKDLEMKG-KDITILIGGPYGLN 108 (163)
T ss_dssp HHHHTTCCTTCEEEEEEEEEEECCHHHHHHHHHHHHHHT-CCEEEEECCTTCCC
T ss_pred HHHHHhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcC-CeEEEEEECCCCCC
Confidence 344555766655888887776 6777777765 58 78988889865543
No 148
>2g3w_A YAEQ protein, hypothetical protein XAC2396; xanthomonas axonopodis PV citri, unknown funct; HET: MSE; 1.90A {Xanthomonas axonopodis PV} SCOP: c.52.1.33
Probab=37.96 E-value=83 Score=23.01 Aligned_cols=42 Identities=10% Similarity=0.048 Sum_probs=26.8
Q ss_pred CCHHHHHHHHhcCCCCCeEEEEcCCchHHHHHHHHHH---cCCCCeeE
Q 030104 122 KNLKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLL---NGFAGITD 166 (183)
Q Consensus 122 ~~~~~~~~~~~~l~~~~~ivv~c~~g~~s~~a~~~L~---~G~~~v~~ 166 (183)
++++.+++... +.++|+|||.++..+...+.... ..++|+.+
T Consensus 87 Pde~rl~KA~~---ra~~V~vy~yg~~~~~vWw~~~~~kl~r~~nl~V 131 (182)
T 2g3w_A 87 PDESRVRKACN---RSREAVVIGYGGQATETWWKKHANAMGRYRNLRV 131 (182)
T ss_dssp CCHHHHHHHHH---HSSEEEEEECCTHHHHHHHHHHHHHHTTCSSEEE
T ss_pred CCHHHHHHhhc---cCCeEEEEecCCchHHHHHHHhHHHHhCcCCcEE
Confidence 35566666654 35689999988766554444443 56776543
No 149
>1vkr_A Mannitol-specific PTS system enzyme iiabc compone; phosphotransferase, transferase, kinase, sugar transport; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1vrv_A* 2few_B*
Probab=37.43 E-value=22 Score=24.17 Aligned_cols=25 Identities=32% Similarity=0.523 Sum_probs=17.1
Q ss_pred CCeEEEEcCCchHHHHH-HH----HHH-cCC
Q 030104 137 HDEIIVGCQSGKRSMMA-AT----DLL-NGF 161 (183)
Q Consensus 137 ~~~ivv~c~~g~~s~~a-~~----~L~-~G~ 161 (183)
-.+|+++|.+|..+... +. .+. .|+
T Consensus 13 ~kkIlvVC~sGmgTS~ml~~klkk~~~e~gi 43 (125)
T 1vkr_A 13 VRKIIVACDAGMGSSAMGAGVLRKKIQDAGL 43 (125)
T ss_dssp CCEEEECCSSSSHHHHHHHHHHHHHHHHTTC
T ss_pred ccEEEEECCCcHHHHHHHHHHHHHHHHHCCC
Confidence 46899999999855533 33 344 676
No 150
>3eiq_A Eukaryotic initiation factor 4A-I; PDCD4, anti-oncogene, apoptosis, cell cycle, nucleus, phosph RNA-binding, ATP-binding, helicase, hydrolase; 3.50A {Homo sapiens}
Probab=37.16 E-value=42 Score=26.57 Aligned_cols=44 Identities=5% Similarity=0.187 Sum_probs=30.8
Q ss_pred HHHHHhcCCCCCeEEEEcCCchHHHHHHHHHH-cCCCCeeEccccHH
Q 030104 127 VEEVSTRFRKHDEIIVGCQSGKRSMMAATDLL-NGFAGITDIAGGFA 172 (183)
Q Consensus 127 ~~~~~~~l~~~~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~GG~~ 172 (183)
+....... ...+++|||++-..+..++..|. .|+ ++..+.|++.
T Consensus 271 l~~~~~~~-~~~~~lvf~~~~~~~~~l~~~l~~~~~-~~~~~h~~~~ 315 (414)
T 3eiq_A 271 LCDLYETL-TITQAVIFINTRRKVDWLTEKMHARDF-TVSAMHGDMD 315 (414)
T ss_dssp HHHHHHSS-CCSSCEEECSCHHHHHHHHHHHHTTTC-CCEEC---CH
T ss_pred HHHHHHhC-CCCcEEEEeCCHHHHHHHHHHHHhcCC-eEEEecCCCC
Confidence 33444443 44689999999888889999999 998 5778888854
No 151
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=37.10 E-value=83 Score=20.27 Aligned_cols=38 Identities=5% Similarity=-0.087 Sum_probs=28.6
Q ss_pred HHHHHHHhcCCCCCeEEEEcCCchHHHHHHHHHH-cCCC
Q 030104 125 KFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLL-NGFA 162 (183)
Q Consensus 125 ~~~~~~~~~l~~~~~ivv~c~~g~~s~~a~~~L~-~G~~ 162 (183)
-..+..++.+..+..+.|..+....-..+..+++ .||+
T Consensus 41 l~tkkaL~~l~~Ge~L~Vl~dd~~a~~dI~~~~~~~G~~ 79 (98)
T 1jdq_A 41 VETKRALQNMKPGEILEVWIDYPMSKERIPETVKKLGHE 79 (98)
T ss_dssp HHHHHHHHTCCTTCEEEEEESSCTHHHHHHHHHHHSSCC
T ss_pred HHHHHHHHhCCCCCEEEEEECCccHHHHHHHHHHHCCCE
Confidence 3455667778888888888877766667788888 9995
No 152
>2fek_A Low molecular weight protein-tyrosine- phosphatase WZB; phosphate binding, hydrolase; NMR {Escherichia coli K12}
Probab=36.87 E-value=20 Score=25.70 Aligned_cols=35 Identities=26% Similarity=0.290 Sum_probs=25.3
Q ss_pred CeEEEEcCCch-HHHHHHHHHH-cCCCCeeEccccHHH
Q 030104 138 DEIIVGCQSGK-RSMMAATDLL-NGFAGITDIAGGFAA 173 (183)
Q Consensus 138 ~~ivv~c~~g~-~s~~a~~~L~-~G~~~v~~l~GG~~~ 173 (183)
++|+|+|.+.. ||..|...|+ .. .++.+...|+.+
T Consensus 23 ~~VLFVCtgN~cRSpmAEal~r~~~-~~~~v~SAGt~~ 59 (167)
T 2fek_A 23 NNILVVCVGNICRSPTAERLLQRYH-PELKVESAGLGA 59 (167)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHC-TTCEEEEEETTC
T ss_pred CeEEEEcCCcHHHHHHHHHHHHHhc-CCeEEEeeecCC
Confidence 47999998765 9998888888 54 246666666644
No 153
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=36.81 E-value=29 Score=22.99 Aligned_cols=26 Identities=23% Similarity=0.431 Sum_probs=17.3
Q ss_pred CCeEEEEcCCchHHHH-HHHHH----H-cCCC
Q 030104 137 HDEIIVGCQSGKRSMM-AATDL----L-NGFA 162 (183)
Q Consensus 137 ~~~ivv~c~~g~~s~~-a~~~L----~-~G~~ 162 (183)
.++|+++|.+|..+.. ++..+ . .|++
T Consensus 21 ~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~ 52 (113)
T 1tvm_A 21 KRKIIVACGGAVATSTMAAEEIKELCQSHNIP 52 (113)
T ss_dssp SEEEEEESCSCSSHHHHHHHHHHHHHHHTTCC
T ss_pred ccEEEEECCCCHHHHHHHHHHHHHHHHHcCCe
Confidence 3579999999985433 44444 4 6774
No 154
>1hv8_A Putative ATP-dependent RNA helicase MJ0669; RNA-binding protein, ATPase, RNA binding protein; 3.00A {Methanocaldococcus jannaschii} SCOP: c.37.1.19 c.37.1.19
Probab=36.49 E-value=40 Score=26.01 Aligned_cols=36 Identities=25% Similarity=0.261 Sum_probs=30.3
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHH-cCCCCeeEccccH
Q 030104 135 RKHDEIIVGCQSGKRSMMAATDLL-NGFAGITDIAGGF 171 (183)
Q Consensus 135 ~~~~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~GG~ 171 (183)
....+++|+|++-..+..++..|. .|+ ++..+.|++
T Consensus 236 ~~~~~~lvf~~~~~~~~~l~~~L~~~~~-~~~~~~~~~ 272 (367)
T 1hv8_A 236 NKEFYGLVFCKTKRDTKELASMLRDIGF-KAGAIHGDL 272 (367)
T ss_dssp STTCCEEEECSSHHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred cCCCcEEEEECCHHHHHHHHHHHHhcCC-CeEEeeCCC
Confidence 355789999999989999999999 998 577788874
No 155
>1ve2_A Uroporphyrin-III C-methyltransferase; heme, biosynthesis, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: c.90.1.1
Probab=36.15 E-value=1.3e+02 Score=22.19 Aligned_cols=108 Identities=19% Similarity=0.082 Sum_probs=56.8
Q ss_pred CCCcccCHHHHHHHHhCCCEEEEcCChhhHhccCCCCceecCcccccCCCCCCCHHHHH-HHHhcCCCCCeEEEEcCCch
Q 030104 70 GVPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVE-EVSTRFRKHDEIIVGCQSGK 148 (183)
Q Consensus 70 ~~~~~i~~~~~~~~~~~~~~lIDvR~~~e~~~ghIpgAvnip~~~~~~~~~~~~~~~~~-~~~~~l~~~~~ivv~c~~g~ 148 (183)
+.+..+|.+.++.+.+.+.++.|.+...+... ++ ++..++...... ......+.+. .+.+....+++|++.+.+.-
T Consensus 13 G~~~~LT~~A~~~L~~advv~~~~~~~~~~l~-~~-~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~g~~V~~l~~GDP 89 (235)
T 1ve2_A 13 GGPEHLTLKALRVLEVAEVVLHDRLVHPGVLA-LA-KGELVPVGKEGY-GGKTPQEAITARLIALAREGRVVARLKGGDP 89 (235)
T ss_dssp SSGGGSBHHHHHHHHHCSEEEECTTSCHHHHT-TC-CSEEEEC--------CCCHHHHHHHHHHHHHTTCEEEEEESBCT
T ss_pred CCHHHHHHHHHHHHHhCCEEEEeCCCCHHHHH-hh-CcEEEEecccCc-ccccCHHHHHHHHHHHHHcCCeEEEEcCCCC
Confidence 34567888888888888888888876555433 22 333332210000 0011223333 33444445677777754311
Q ss_pred ----HHHHHHHHHH-cCCCCeeEccc---cHHHhhhCCCCC
Q 030104 149 ----RSMMAATDLL-NGFAGITDIAG---GFAAWRQNGLPT 181 (183)
Q Consensus 149 ----~s~~a~~~L~-~G~~~v~~l~G---G~~~W~~~g~pv 181 (183)
........+. .|+ ++.++-| -..+....|.|+
T Consensus 90 ~i~~~~~~l~~~l~~~gi-~v~viPGiSs~~aa~a~~g~pl 129 (235)
T 1ve2_A 90 MVFGRGGEEALALRRAGI-PFEVVPGVTSAVGALSALGLPL 129 (235)
T ss_dssp TSSTTHHHHHHHHHHHTC-CEEEECCCCTTHHHHHHTTCCS
T ss_pred CcccCHHHHHHHHHHCCC-CEEEECCHhHHHHHHHHcCCCc
Confidence 4445666677 787 5766665 233445556654
No 156
>3i5x_A ATP-dependent RNA helicase MSS116; protein-RNA complex, RNA helicase, DEAD-BOX, ATP-binding, HE hydrolase, mitochondrion; HET: ANP; 1.90A {Saccharomyces cerevisiae} PDB: 3i5y_A* 3i61_A* 3i62_A* 3sqx_A* 4db2_A 4db4_A
Probab=35.94 E-value=47 Score=27.87 Aligned_cols=36 Identities=14% Similarity=0.123 Sum_probs=29.7
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHH-c---CCCCeeEccccH
Q 030104 135 RKHDEIIVGCQSGKRSMMAATDLL-N---GFAGITDIAGGF 171 (183)
Q Consensus 135 ~~~~~ivv~c~~g~~s~~a~~~L~-~---G~~~v~~l~GG~ 171 (183)
..+.++||||++-..+..++..|. . |+ .+..+.|++
T Consensus 337 ~~~~~~iVF~~s~~~~~~l~~~L~~~~~~~~-~v~~~h~~~ 376 (563)
T 3i5x_A 337 DSNYKAIIFAPTVKFTSFLCSILKNEFKKDL-PILEFHGKI 376 (563)
T ss_dssp TTCCEEEEECSCHHHHHHHHHHHHHHHTTTS-CEEEESTTS
T ss_pred CCCCcEEEEcCcHHHHHHHHHHHHHhccCCc-eEEEecCCC
Confidence 567799999999888888998888 5 76 577788875
No 157
>3fht_A ATP-dependent RNA helicase DDX19B; DBP5, DEAD-box helicase, RNA dependent ATPase, mRNA export, nucleocytoplasmic transport, NUP214, CAN; HET: ANP; 2.20A {Homo sapiens} PDB: 3ews_A* 3g0h_A* 3fhc_B
Probab=35.27 E-value=31 Score=27.34 Aligned_cols=35 Identities=17% Similarity=0.359 Sum_probs=29.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHH-cCCCCeeEccccH
Q 030104 136 KHDEIIVGCQSGKRSMMAATDLL-NGFAGITDIAGGF 171 (183)
Q Consensus 136 ~~~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~GG~ 171 (183)
...+++|||++-..+..++..|. .|+ ++..+.|++
T Consensus 265 ~~~~~lvf~~~~~~~~~l~~~L~~~~~-~~~~~~~~~ 300 (412)
T 3fht_A 265 TIAQAMIFCHTRKTASWLAAELSKEGH-QVALLSGEM 300 (412)
T ss_dssp SSSEEEEECSSHHHHHHHHHHHHHTTC-CCEEECTTS
T ss_pred CCCCEEEEeCCHHHHHHHHHHHHhCCC-eEEEecCCC
Confidence 45689999999889999999999 998 577888874
No 158
>1y1l_A Arsenate reductase (ARSC); detoxification, cadmium, oxidized form, structural genomics, PSI, protein structure initiative; 2.80A {Archaeoglobus fulgidus} SCOP: c.44.1.1
Probab=35.05 E-value=35 Score=22.90 Aligned_cols=33 Identities=18% Similarity=0.240 Sum_probs=22.1
Q ss_pred eEEEEcCCch-HHHHHHHHHH-cCCCCeeEccccHH
Q 030104 139 EIIVGCQSGK-RSMMAATDLL-NGFAGITDIAGGFA 172 (183)
Q Consensus 139 ~ivv~c~~g~-~s~~a~~~L~-~G~~~v~~l~GG~~ 172 (183)
+|+|+|.+.. ||..|...|+ ..- ++.+...|+.
T Consensus 1 ~VLFVC~gN~cRSpmAEa~~~~~~~-~~~v~SAGt~ 35 (124)
T 1y1l_A 1 KVLFVCIHNTARSVMAEALFNAMAK-SWKAESAGVE 35 (124)
T ss_dssp CEEEEESSCSSHHHHHHHHHHTTCS-SCCEEEEESS
T ss_pred CEEEEeCCChhHHHHHHHHHHHhcC-CEEEEecCCC
Confidence 4889997665 8988888888 432 4555555544
No 159
>2ybo_A Methyltransferase; SUMT, NIRE, heme D1 biosynthesis; HET: SAH; 2.00A {Pseudomonas aeruginosa} PDB: 2ybq_A*
Probab=34.14 E-value=86 Score=24.32 Aligned_cols=108 Identities=19% Similarity=0.145 Sum_probs=53.8
Q ss_pred CCCcccCHHHHHHHHhCCCEEEEcCChhhHhccCCC-CceecCcccccCCCCCCCHHHHH-HHHhcCCCCCeEEEEcCCc
Q 030104 70 GVPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHAT-GAINVPYMYRVGSGMTKNLKFVE-EVSTRFRKHDEIIVGCQSG 147 (183)
Q Consensus 70 ~~~~~i~~~~~~~~~~~~~~lIDvR~~~e~~~ghIp-gAvnip~~~~~~~~~~~~~~~~~-~~~~~l~~~~~ivv~c~~g 147 (183)
+.+..+|...++.+.+.++++.|.|...+... +++ ++..+......... ....+.+. .+.+....+++|++.+. |
T Consensus 35 Gdp~lLTlrA~~~L~~ADvV~~d~~~~~~il~-~~~~~~~~i~~~k~~~~~-~~~~~~i~~~l~~~~~~G~~Vv~L~~-G 111 (294)
T 2ybo_A 35 GDPGLLTLRAWALLQQAEVVVYDRLVARELIA-LLPESCQRIYVGKRCGHH-SLPQEEINELLVRLARQQRRVVRLKG-G 111 (294)
T ss_dssp SCGGGSCHHHHHHHTTCSEEEECTTSCHHHHH-HSCTTSEEEECC---------CHHHHHHHHHHHHHTTCCEEEEEE-B
T ss_pred CCHHHHHHHHHHHHHcCCEEEEcCCCCHHHHH-hcccCCeEEecccccccc-cCCHHHHHHHHHHHHHCCCeEEEEcC-C
Confidence 34556788777777777788888876554432 222 22222211100000 11223332 33333445666777643 3
Q ss_pred h-----HHHHHHHHHH-cCCCCeeEcccc---HHHhhhCCCCC
Q 030104 148 K-----RSMMAATDLL-NGFAGITDIAGG---FAAWRQNGLPT 181 (183)
Q Consensus 148 ~-----~s~~a~~~L~-~G~~~v~~l~GG---~~~W~~~g~pv 181 (183)
. +.......+. .|+ .+.++-|= ..+....|.|+
T Consensus 112 DP~i~g~g~~l~~~l~~~gi-~vevIPGiSS~~aa~a~~Gipl 153 (294)
T 2ybo_A 112 DPFIFGRGAEELERLLEAGV-DCQVVPGVTAASGCSTYAGIPL 153 (294)
T ss_dssp CTTSSSSHHHHHHHHHHTTC-CEEEECCCCHHHHHHHHTTCCS
T ss_pred CCCccCCHHHHHHHHHHCCC-CEEEECCHHHHHHHHHHcCCCc
Confidence 2 4456667777 887 56666652 23344455554
No 160
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=33.91 E-value=37 Score=22.23 Aligned_cols=25 Identities=24% Similarity=0.414 Sum_probs=17.2
Q ss_pred CeEEEEcCCchHHHH-HH----HHHH-cCCC
Q 030104 138 DEIIVGCQSGKRSMM-AA----TDLL-NGFA 162 (183)
Q Consensus 138 ~~ivv~c~~g~~s~~-a~----~~L~-~G~~ 162 (183)
++|+++|.+|..+.. +. ..+. .|++
T Consensus 19 ~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~ 49 (110)
T 3czc_A 19 VKVLTACGNGMGSSMVIKMKVENALRQLGVS 49 (110)
T ss_dssp EEEEEECCCCHHHHHHHHHHHHHHHHHTTCC
T ss_pred cEEEEECCCcHHHHHHHHHHHHHHHHHcCCC
Confidence 579999999985443 33 3445 7775
No 161
>4h3k_B RNA polymerase II subunit A C-terminal domain PHO SSU72; heat repeat, phosphatase, RNA polymerase II, hydrolase; HET: SEP; 2.00A {Homo sapiens} PDB: 3o2q_B* 4h3h_B* 3o2s_B
Probab=33.78 E-value=45 Score=25.03 Aligned_cols=29 Identities=31% Similarity=0.353 Sum_probs=23.9
Q ss_pred CeEEEEcCCc-hHHHHHHHHHH-cCCCCeeEc
Q 030104 138 DEIIVGCQSG-KRSMMAATDLL-NGFAGITDI 167 (183)
Q Consensus 138 ~~ivv~c~~g-~~s~~a~~~L~-~G~~~v~~l 167 (183)
-++-++|.+. +||..+=..|. .|| +|.-+
T Consensus 26 Lr~avVCaSN~NRSMEAH~~L~k~Gf-~V~Sf 56 (214)
T 4h3k_B 26 LRVAVVSSSNQNRSMEAHNILSKRGF-SVRSF 56 (214)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHTTC-EEEEE
T ss_pred CeEEEECCCCcchhHHHHHHHHHCCC-ceEee
Confidence 4689999976 59999999999 999 66544
No 162
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=33.26 E-value=49 Score=22.20 Aligned_cols=28 Identities=14% Similarity=0.165 Sum_probs=19.2
Q ss_pred EEEcCCchHHHHHHHHHH-cCCCCeeEccc
Q 030104 141 IVGCQSGKRSMMAATDLL-NGFAGITDIAG 169 (183)
Q Consensus 141 vv~c~~g~~s~~a~~~L~-~G~~~v~~l~G 169 (183)
|++|..|.-...++..|. .|+ +|.+++-
T Consensus 10 viIiG~G~~G~~la~~L~~~g~-~v~vid~ 38 (140)
T 3fwz_A 10 ALLVGYGRVGSLLGEKLLASDI-PLVVIET 38 (140)
T ss_dssp EEEECCSHHHHHHHHHHHHTTC-CEEEEES
T ss_pred EEEECcCHHHHHHHHHHHHCCC-CEEEEEC
Confidence 455566777777888888 887 5665554
No 163
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=32.97 E-value=23 Score=23.28 Aligned_cols=25 Identities=8% Similarity=0.072 Sum_probs=17.3
Q ss_pred CeEEEEcCCchHHHHHHHH----HH-cCCC
Q 030104 138 DEIIVGCQSGKRSMMAATD----LL-NGFA 162 (183)
Q Consensus 138 ~~ivv~c~~g~~s~~a~~~----L~-~G~~ 162 (183)
++|++.|.+|..+..++.. +. .|++
T Consensus 4 kkIll~Cg~G~sTS~l~~k~~~~~~~~gi~ 33 (106)
T 1e2b_A 4 KHIYLFSSAGMSTSLLVSKMRAQAEKYEVP 33 (106)
T ss_dssp EEEEEECSSSTTTHHHHHHHHHHHHHSCCS
T ss_pred cEEEEECCCchhHHHHHHHHHHHHHHCCCC
Confidence 4799999999855444444 44 7774
No 164
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=32.82 E-value=51 Score=27.82 Aligned_cols=31 Identities=23% Similarity=0.373 Sum_probs=22.4
Q ss_pred cCCCCCeEEEEcCCch---HHHHHHHHHH-cCCCCee
Q 030104 133 RFRKHDEIIVGCQSGK---RSMMAATDLL-NGFAGIT 165 (183)
Q Consensus 133 ~l~~~~~ivv~c~~g~---~s~~a~~~L~-~G~~~v~ 165 (183)
.+++.++|+|+|..|+ ....+++.|. . | +|.
T Consensus 42 ~~~~~~~v~VlcG~GNNGGDGlv~AR~L~~~-~-~V~ 76 (475)
T 3k5w_A 42 NASLGAKVIILCGSGDNGGDGYALARRLVGR-F-RVL 76 (475)
T ss_dssp TSCTTCEEEEEECSSHHHHHHHHHHHHHBTT-B-EEE
T ss_pred HcCCCCeEEEEECCCCCHHHHHHHHHHHHcC-C-ceE
Confidence 3556789999999887 4556777777 6 6 454
No 165
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=32.66 E-value=16 Score=24.02 Aligned_cols=27 Identities=15% Similarity=0.299 Sum_probs=17.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHH----H-cCCC
Q 030104 136 KHDEIIVGCQSGKRSMMAATDL----L-NGFA 162 (183)
Q Consensus 136 ~~~~ivv~c~~g~~s~~a~~~L----~-~G~~ 162 (183)
+.-+|+++|.+|..+..++..+ . .|++
T Consensus 3 ~~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~ 34 (109)
T 2l2q_A 3 GSMNILLVCGAGMSTSMLVQRIEKYAKSKNIN 34 (109)
T ss_dssp CCEEEEEESSSSCSSCHHHHHHHHHHHHHTCS
T ss_pred CceEEEEECCChHhHHHHHHHHHHHHHHCCCC
Confidence 3456999999998433444444 4 6764
No 166
>2j0s_A ATP-dependent RNA helicase DDX48; mRNA processing, phosphorylation, rRNA processing, mRNA splicing, mRNA transport; HET: ANP; 2.21A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 2j0q_A* 2hyi_C* 3ex7_C* 2xb2_A* 2hxy_A 2j0u_A 2j0u_B 2zu6_A
Probab=32.30 E-value=45 Score=26.48 Aligned_cols=34 Identities=9% Similarity=0.337 Sum_probs=29.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHH-cCCCCeeEccccH
Q 030104 137 HDEIIVGCQSGKRSMMAATDLL-NGFAGITDIAGGF 171 (183)
Q Consensus 137 ~~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~GG~ 171 (183)
..+++|||++-..+..++..|. .|+ ++..+.|++
T Consensus 276 ~~~~lVf~~~~~~~~~l~~~L~~~~~-~~~~~h~~~ 310 (410)
T 2j0s_A 276 ITQAVIFCNTKRKVDWLTEKMREANF-TVSSMHGDM 310 (410)
T ss_dssp SSEEEEECSSHHHHHHHHHHHHHTTC-CCEEECTTS
T ss_pred CCcEEEEEcCHHHHHHHHHHHHhCCC-ceEEeeCCC
Confidence 4589999999888889999999 998 577888875
No 167
>3ndc_A Precorrin-4 C(11)-methyltransferase; SAH; HET: SAH; 2.00A {Rhodobacter capsulatus} PDB: 3nei_A
Probab=32.29 E-value=1.6e+02 Score=22.39 Aligned_cols=92 Identities=13% Similarity=0.057 Sum_probs=50.8
Q ss_pred CCCcccCHHHHHHHHhCCCEEE-EcCChhhHhccCCCCceecCcccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCch
Q 030104 70 GVPTSVPVRVAHELLQAGHRYL-DVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGK 148 (183)
Q Consensus 70 ~~~~~i~~~~~~~~~~~~~~lI-DvR~~~e~~~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~ 148 (183)
+.+..+|.+.++.+.+.++++. |.+-..+.....-+++.-+... .....+..+.+.+.+..+++|++.+ +|.
T Consensus 14 G~~~lLT~~A~~~L~~AdvV~~~~~~~~~~ll~~~~~~~~~~~~~------~~~~~~~~~~i~~~~~~G~~Va~L~-~GD 86 (264)
T 3ndc_A 14 GAADLITIRGRDLIASCPVCLYAGSLVPEALLAHCPPGAKIVNTA------PMSLDAIIDTIAEAHAAGQDVARLH-SGD 86 (264)
T ss_dssp SCGGGSBHHHHHHHHHCSEEEECSTTSCGGGGGGSCTTCEEEECT------TSCHHHHHHHHHHHHHHTCCEEEEE-SBC
T ss_pred CChHHHHHHHHHHHHcCCEEEEECCCCCHHHHhhcCCCCEEEecC------CCCHHHHHHHHHHHHHCCCeEEEEe-CCC
Confidence 3456788888888888887776 7665444332222344433321 0011123333333344567788877 443
Q ss_pred -----HHHHHHHHHH-cCCCCeeEccc
Q 030104 149 -----RSMMAATDLL-NGFAGITDIAG 169 (183)
Q Consensus 149 -----~s~~a~~~L~-~G~~~v~~l~G 169 (183)
........|. .|+ .+.++-|
T Consensus 87 P~iyg~~~~l~~~l~~~gi-~veviPG 112 (264)
T 3ndc_A 87 LSIWSAMGEQLRRLRALNI-PYDVTPG 112 (264)
T ss_dssp TTSSCSHHHHHHHHHHTTC-CEEEECC
T ss_pred CccccHHHHHHHHHHhCCC-CEEEeCC
Confidence 4456667777 787 4666655
No 168
>3sqw_A ATP-dependent RNA helicase MSS116, mitochondrial; RECA fold, RNA dependent ATPase, RNA helicase; HET: ANP; 1.91A {Saccharomyces cerevisiae S288C}
Probab=32.29 E-value=57 Score=27.67 Aligned_cols=36 Identities=14% Similarity=0.123 Sum_probs=29.7
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHH-c---CCCCeeEccccH
Q 030104 135 RKHDEIIVGCQSGKRSMMAATDLL-N---GFAGITDIAGGF 171 (183)
Q Consensus 135 ~~~~~ivv~c~~g~~s~~a~~~L~-~---G~~~v~~l~GG~ 171 (183)
..+.++||||.+-..+..++..|. . |+ .+..+.|++
T Consensus 286 ~~~~~~iVF~~t~~~~~~l~~~L~~~~~~~~-~v~~~hg~~ 325 (579)
T 3sqw_A 286 DSNYKAIIFAPTVKFTSFLCSILKNEFKKDL-PILEFHGKI 325 (579)
T ss_dssp TTCCEEEEECSSHHHHHHHHHHHHHHHTTTS-CEEEESTTS
T ss_pred CCCCcEEEECCcHHHHHHHHHHHHHhhcCCC-cEEEecCCC
Confidence 456799999999888888999998 5 76 577788884
No 169
>3o8b_A HCV NS3 protease/helicase; ntpase, RNA, translocation, protein-RNA compl protease/ntpase/helicase, hydrolase; 1.95A {Hepatitis c virus} PDB: 3o8c_A* 3o8d_A* 3o8r_A* 4b71_A* 4b73_A* 4b74_A* 4b76_A* 4b75_A* 4a92_A* 1cu1_A 4b6e_A* 4b6f_A* 2zjo_A* 1a1v_A* 1hei_A 3kqn_A* 3kql_A* 3kqu_A* 3kqh_A 3kqk_A ...
Probab=28.95 E-value=46 Score=29.41 Aligned_cols=36 Identities=19% Similarity=0.257 Sum_probs=30.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHH-cCCCCeeEccccHH
Q 030104 136 KHDEIIVGCQSGKRSMMAATDLL-NGFAGITDIAGGFA 172 (183)
Q Consensus 136 ~~~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~GG~~ 172 (183)
+..+++|||++-..+..++..|. .|+ ++..+.|++.
T Consensus 395 ~~~~vLVFv~Tr~~ae~la~~L~~~g~-~v~~lHG~l~ 431 (666)
T 3o8b_A 395 RGGRHLIFCHSKKKCDELAAKLSGLGI-NAVAYYRGLD 431 (666)
T ss_dssp SSSEEEEECSCHHHHHHHHHHHHTTTC-CEEEECTTSC
T ss_pred cCCcEEEEeCCHHHHHHHHHHHHhCCC-cEEEecCCCC
Confidence 45789999999999999999999 998 6888888764
No 170
>2db3_A ATP-dependent RNA helicase VASA; DEAD-BOX, protein-RNA complex, ATPase, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.20A {Drosophila melanogaster}
Probab=28.13 E-value=97 Score=25.12 Aligned_cols=32 Identities=25% Similarity=0.199 Sum_probs=27.9
Q ss_pred eEEEEcCCchHHHHHHHHHH-cCCCCeeEccccH
Q 030104 139 EIIVGCQSGKRSMMAATDLL-NGFAGITDIAGGF 171 (183)
Q Consensus 139 ~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~GG~ 171 (183)
+++|||++-..+..++..|. .|+ ++..+.|++
T Consensus 302 ~~lVF~~t~~~a~~l~~~L~~~~~-~~~~lhg~~ 334 (434)
T 2db3_A 302 GTIVFVETKRGADFLASFLSEKEF-PTTSIHGDR 334 (434)
T ss_dssp TEEEECSSHHHHHHHHHHHHHTTC-CEEEESTTS
T ss_pred CEEEEEeCcHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence 49999999888999999999 998 577888874
No 171
>3t38_A Arsenate reductase; low molecular weight tyrosine phosphatase fold, reduction of to arsenite, oxidoreductase; 2.20A {Corynebacterium glutamicum}
Probab=28.03 E-value=40 Score=25.22 Aligned_cols=36 Identities=17% Similarity=0.174 Sum_probs=25.5
Q ss_pred CCCeEEEEcCCch-HHHHHHHHHH-cCCCCeeEccccH
Q 030104 136 KHDEIIVGCQSGK-RSMMAATDLL-NGFAGITDIAGGF 171 (183)
Q Consensus 136 ~~~~ivv~c~~g~-~s~~a~~~L~-~G~~~v~~l~GG~ 171 (183)
...+|+|+|.+.. ||..+...++ ..-+++.+...|.
T Consensus 80 ~~~~VLFVCtgN~cRSpmAEal~~~~~~~~~~v~SAGt 117 (213)
T 3t38_A 80 PVPQVLFICVHNAGRSQIASALLSHYAGSSVEVRSAGS 117 (213)
T ss_dssp CCCEEEEEESSSSSHHHHHHHHHHHHHGGGCEEEEEES
T ss_pred CCCEEEEECCCchhHHHHHHHHHHHhccCceEEEeccc
Confidence 3478999998765 8988888887 4334566666564
No 172
>1ns5_A Hypothetical protein YBEA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.68A {Escherichia coli} SCOP: c.116.1.3
Probab=27.89 E-value=56 Score=23.17 Aligned_cols=44 Identities=20% Similarity=0.260 Sum_probs=30.4
Q ss_pred HHHhcCCCCCeEEEEcCCch--HHHHHHHHHH----cCCCCeeEccccHHHh
Q 030104 129 EVSTRFRKHDEIIVGCQSGK--RSMMAATDLL----NGFAGITDIAGGFAAW 174 (183)
Q Consensus 129 ~~~~~l~~~~~ivv~c~~g~--~s~~a~~~L~----~G~~~v~~l~GG~~~W 174 (183)
...+.++++ .+|+.|..|. .|...+..|. .| .++..+-||-.++
T Consensus 59 ~il~~i~~~-~vi~Ld~~Gk~~sS~~fA~~l~~~~~~g-~~i~FvIGG~~Gl 108 (155)
T 1ns5_A 59 QMLAAAGKN-RIVTLDIPGKPWDTPQLAAELERWKLDG-RDVSLLIGGPEGL 108 (155)
T ss_dssp HHHHHHTTS-EEEEEEEEEECCCHHHHHHHHHHHHHHC-SCEEEEECBTTBC
T ss_pred HHHHhcCCC-cEEEEcCCCCcCCHHHHHHHHHHHHhcC-CeEEEEEECCCCC
Confidence 344456665 6888887776 6777777765 58 7888888986443
No 173
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=27.73 E-value=54 Score=22.38 Aligned_cols=30 Identities=17% Similarity=0.253 Sum_probs=24.1
Q ss_pred CCCeEEEEcC---CchHHHHHHHHHH-cCCCCee
Q 030104 136 KHDEIIVGCQ---SGKRSMMAATDLL-NGFAGIT 165 (183)
Q Consensus 136 ~~~~ivv~c~---~g~~s~~a~~~L~-~G~~~v~ 165 (183)
++++|+++++ +|.....++..|+ .|...|.
T Consensus 82 ~gk~VllVDDvitTG~Tl~~a~~~L~~~ga~~v~ 115 (153)
T 1vdm_A 82 KDKRVVIVDDVSDTGKTLEVVIEEVKKLGAKEIK 115 (153)
T ss_dssp BTCEEEEEEEEESSCHHHHHHHHHHHTTTBSEEE
T ss_pred CCCEEEEEecccCChHHHHHHHHHHHHcCCCEEE
Confidence 5678888765 7888888999999 9987664
No 174
>2p1z_A Phosphoribosyltransferase; STRU genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.44A {Corynebacterium diphtheriae}
Probab=27.32 E-value=76 Score=22.57 Aligned_cols=47 Identities=17% Similarity=0.218 Sum_probs=32.5
Q ss_pred CCCCeEEEEcC---CchHHHHHHHHHH-cCCCCeeE---c---cccHHHhhhCCCCC
Q 030104 135 RKHDEIIVGCQ---SGKRSMMAATDLL-NGFAGITD---I---AGGFAAWRQNGLPT 181 (183)
Q Consensus 135 ~~~~~ivv~c~---~g~~s~~a~~~L~-~G~~~v~~---l---~GG~~~W~~~g~pv 181 (183)
.++++|+++++ +|.....++..|+ .|.+.|.+ + .||.....+.|.|+
T Consensus 112 ~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~~g~~~l~~~g~~~ 168 (180)
T 2p1z_A 112 VVGKKVLVVEDTTTTGNSPLTAVKALREAGAEVVGVATVVDRATGAADVIAAEGLEY 168 (180)
T ss_dssp CTTCEEEEEEEECSSSHHHHHHHHHHHHHTCEEEEEEEEEC-CCCHHHHHHTTTCCE
T ss_pred CCcCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEcCcchHHHHHhcCCeE
Confidence 36788998865 7888888999999 99865532 2 25555555567665
No 175
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=26.02 E-value=78 Score=20.92 Aligned_cols=28 Identities=11% Similarity=0.063 Sum_probs=18.1
Q ss_pred EEEcCCchHHHHHHHHHH-cCCCCeeEccc
Q 030104 141 IVGCQSGKRSMMAATDLL-NGFAGITDIAG 169 (183)
Q Consensus 141 vv~c~~g~~s~~a~~~L~-~G~~~v~~l~G 169 (183)
|++|..|.-...++..|. .|+ +|..++-
T Consensus 9 v~I~G~G~iG~~la~~L~~~g~-~V~~id~ 37 (141)
T 3llv_A 9 YIVIGSEAAGVGLVRELTAAGK-KVLAVDK 37 (141)
T ss_dssp EEEECCSHHHHHHHHHHHHTTC-CEEEEES
T ss_pred EEEECCCHHHHHHHHHHHHCCC-eEEEEEC
Confidence 344455666677788888 887 5665553
No 176
>4e16_A Precorrin-4 C(11)-methyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.49A {Clostridium difficile}
Probab=25.96 E-value=2.1e+02 Score=21.41 Aligned_cols=92 Identities=9% Similarity=-0.012 Sum_probs=49.4
Q ss_pred CCCcccCHHHHHHHHhCCCEEE-EcCChhhHhccCCCCceecCcccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCch
Q 030104 70 GVPTSVPVRVAHELLQAGHRYL-DVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGK 148 (183)
Q Consensus 70 ~~~~~i~~~~~~~~~~~~~~lI-DvR~~~e~~~ghIpgAvnip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~ 148 (183)
+.+..+|...++.+.+.++++. |.+...+.....-+++.-+... .....+..+.+.+.+..+++|++.+ +|.
T Consensus 15 G~~~~lT~~A~~~L~~advv~~~~~~~~~~~l~~~~~~~~~~~~~------~~~~~~~~~~i~~~~~~g~~V~~l~-~GD 87 (253)
T 4e16_A 15 GDKELITLKGYKLLSNADVVIYAGSLVNPELLEYCKEDCQIHNSA------HMDLQEIIDVMREGIENNKSVVRLQ-TGD 87 (253)
T ss_dssp SCGGGSCHHHHHHHHHCSEEEECTTTSCGGGGGGSCTTCEEEEGG------GCCHHHHHHHHHHHHHTTCCEEEEE-SBC
T ss_pred CCHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHhhcCCCCEEEecC------CCCHHHHHHHHHHHHHCCCcEEEEe-CCC
Confidence 3456788888888878887777 6554433322111233222110 0011122333344445667788877 443
Q ss_pred -----HHHHHHHHHH-cCCCCeeEccc
Q 030104 149 -----RSMMAATDLL-NGFAGITDIAG 169 (183)
Q Consensus 149 -----~s~~a~~~L~-~G~~~v~~l~G 169 (183)
+.......+. .|+ .+.++-|
T Consensus 88 P~i~~~~~~l~~~l~~~gi-~veviPG 113 (253)
T 4e16_A 88 FSIYGSIREQVEDLNKLNI-DYDCTPG 113 (253)
T ss_dssp TTTTCCHHHHHHHHHHHTC-CEEEECC
T ss_pred CccccCHHHHHHHHHHCCC-CEEEECC
Confidence 4455666777 787 4666665
No 177
>1zat_A L,D-transpeptidase; L,D-transpeptidation, peptidoglycan, beta-lactam insensitive transpeptidase, antibiotic resistance, transferase; 2.40A {Enterococcus faecium} SCOP: b.160.1.1 d.335.1.1 PDB: 2hkl_A
Probab=25.85 E-value=44 Score=25.26 Aligned_cols=27 Identities=26% Similarity=0.345 Sum_probs=22.2
Q ss_pred CCceecCcccccCCCCCCCHHHHHHHHhcCCCCCeEEEE
Q 030104 105 TGAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVG 143 (183)
Q Consensus 105 pgAvnip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~ 143 (183)
-|.||++. +.+++++..++.+.+|+||
T Consensus 224 hGCIrl~~------------~da~~l~~~v~~Gt~V~I~ 250 (250)
T 1zat_A 224 HGCINTPP------------SVMKELFGMVEKGTPVLVF 250 (250)
T ss_dssp SSSEEECH------------HHHHHHHHHCCTTCEEEEC
T ss_pred CCEeCcCH------------HHHHHHHhhCCCCCEEEeC
Confidence 36778876 7888999989899999886
No 178
>2c5s_A THII, probable thiamine biosynthesis protein THII; RNA-binding protein, RNA binding protein, tRNA modification, 4-thiouridine synthase; HET: AMP; 2.5A {Bacillus anthracis} SCOP: c.26.2.6 d.308.1.1
Probab=25.37 E-value=40 Score=27.72 Aligned_cols=27 Identities=22% Similarity=0.199 Sum_probs=22.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHH-cCCC
Q 030104 136 KHDEIIVGCQSGKRSMMAATDLL-NGFA 162 (183)
Q Consensus 136 ~~~~ivv~c~~g~~s~~a~~~L~-~G~~ 162 (183)
.+.++++...+|..|..++..+. .|++
T Consensus 186 ~~~kvlvalSGGvDS~vll~ll~~~G~~ 213 (413)
T 2c5s_A 186 VGGKVMVLLSGGIDSPVAAYLTMKRGVS 213 (413)
T ss_dssp TTEEEEEECCSSSHHHHHHHHHHHBTEE
T ss_pred CCCeEEEEeCCCChHHHHHHHHHHcCCc
Confidence 45678888888889998888888 8874
No 179
>4gl2_A Interferon-induced helicase C domain-containing P; MDA5, dsRNA, anti-viral signaling, RIG-I, MAVS, oligomerizat helicase, ATPase; HET: ANP; 3.56A {Homo sapiens}
Probab=24.91 E-value=1e+02 Score=26.57 Aligned_cols=33 Identities=12% Similarity=0.147 Sum_probs=25.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHH-c------CCCCeeEcccc
Q 030104 137 HDEIIVGCQSGKRSMMAATDLL-N------GFAGITDIAGG 170 (183)
Q Consensus 137 ~~~ivv~c~~g~~s~~a~~~L~-~------G~~~v~~l~GG 170 (183)
+.++||||.+-..+..++..|. . |+ ++..+.|+
T Consensus 400 ~~~~IVF~~s~~~~~~l~~~L~~~~~l~~~g~-~~~~lhg~ 439 (699)
T 4gl2_A 400 SARGIIFTKTRQSAYALSQWITENEKFAEVGV-KAHHLIGA 439 (699)
T ss_dssp CCCEEEECSCHHHHHHHHHHHHSSCSCC------CEECCCS
T ss_pred CCcEEEEECcHHHHHHHHHHHHhCccccccCc-ceEEEECC
Confidence 6889999999888889999998 7 77 56678877
No 180
>3jux_A Protein translocase subunit SECA; protein translocation, ATPase, conformational change, peptide binding, ATP-binding, cell inner membrane; HET: ADP; 3.10A {Thermotoga maritima} PDB: 3din_A*
Probab=24.68 E-value=70 Score=29.01 Aligned_cols=36 Identities=19% Similarity=0.301 Sum_probs=30.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHH-cCCCCeeEccccHH
Q 030104 136 KHDEIIVGCQSGKRSMMAATDLL-NGFAGITDIAGGFA 172 (183)
Q Consensus 136 ~~~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~GG~~ 172 (183)
++.+|+|+|++-..+..++..|. .|+. ..+|.|+..
T Consensus 473 ~gqpVLVFt~S~e~sE~Ls~~L~~~Gi~-~~vLhgkq~ 509 (822)
T 3jux_A 473 KGQPVLVGTTSIEKSELLSSMLKKKGIP-HQVLNAKYH 509 (822)
T ss_dssp HTCCEEEEESSHHHHHHHHHHHHTTTCC-CEEECSCHH
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHCCCC-EEEeeCCch
Confidence 46799999999999999999999 9994 667888743
No 181
>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1
Probab=24.47 E-value=67 Score=22.50 Aligned_cols=30 Identities=13% Similarity=0.169 Sum_probs=24.4
Q ss_pred CCCeEEEEcC---CchHHHHHHHHHH-cCCCCee
Q 030104 136 KHDEIIVGCQ---SGKRSMMAATDLL-NGFAGIT 165 (183)
Q Consensus 136 ~~~~ivv~c~---~g~~s~~a~~~L~-~G~~~v~ 165 (183)
++++|+++++ +|.....++..|+ .|...|.
T Consensus 119 ~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~V~ 152 (175)
T 1vch_A 119 LNQRVVLVSDVVASGETMRAMEKMVLRAGGHVVA 152 (175)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEEeccccchHHHHHHHHHHHHcCCeEEE
Confidence 5678999875 7888888999999 9987664
No 182
>1va0_A Uroporphyrin-III C-methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.97A {Thermus thermophilus} SCOP: c.90.1.1 PDB: 1v9a_A
Probab=24.40 E-value=2.1e+02 Score=20.99 Aligned_cols=95 Identities=18% Similarity=0.113 Sum_probs=50.3
Q ss_pred CCCcccCHHHHHHHHhCCCEEEEcCChhhHhccCCCCceecCcccccCCCCCCCHHHH-HHHHhcCCCCCeEEEEcCCch
Q 030104 70 GVPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHATGAINVPYMYRVGSGMTKNLKFV-EEVSTRFRKHDEIIVGCQSGK 148 (183)
Q Consensus 70 ~~~~~i~~~~~~~~~~~~~~lIDvR~~~e~~~ghIpgAvnip~~~~~~~~~~~~~~~~-~~~~~~l~~~~~ivv~c~~g~ 148 (183)
+.+..+|.+.++.+.+.++++.|.+...+... +++ +-.+........ ....+.+ +.+.+....+++|++.+.+.-
T Consensus 11 G~~~~LT~~A~~~L~~advI~~~~~~~~~~l~-~~~-~~~i~~~~~~~~--~~~~~~~~~~i~~~~~~g~~V~~l~~GDP 86 (239)
T 1va0_A 11 GDPELLTLKAYRLLKEAPVVLYDRLVDERVLA-LAP-GEKVYVGKEEGE--SEKQEEIHRLLLRHARAHPFVVRLKGGDP 86 (239)
T ss_dssp SCGGGSBHHHHHHHHHCSEEEECTTSCHHHHT-TCC-SEEEECCCCC------CHHHHHHHHHHHHHTSSEEEEEESBCT
T ss_pred CCHHHHHHHHHHHHHhCCEEEEcCCCCHHHHh-hcc-ccEEeccccccc--ccCHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 34567888888888888888888776554432 333 322322110000 1122232 333333445677777754311
Q ss_pred ----HHHHHHHHHH-cCCCCeeEccc
Q 030104 149 ----RSMMAATDLL-NGFAGITDIAG 169 (183)
Q Consensus 149 ----~s~~a~~~L~-~G~~~v~~l~G 169 (183)
........+. .|+ ++.++-|
T Consensus 87 ~i~~~~~~l~~~l~~~gi-~v~viPG 111 (239)
T 1va0_A 87 MVFGRGGEEVLFLLRHGV-PVEVVPG 111 (239)
T ss_dssp TSSSSHHHHHHHHHHTTC-CEEEECC
T ss_pred ccccCHHHHHHHHHHCCC-cEEEECC
Confidence 4446666777 887 4665554
No 183
>1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol, hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1 c.45.1.1
Probab=23.99 E-value=77 Score=24.96 Aligned_cols=61 Identities=10% Similarity=0.267 Sum_probs=31.4
Q ss_pred CCEEEEcCChhhHhccCCCC-ceecCcccccCCCCCCCHHHHHHH----HhcC--CCCCeEEEEcCCch-HHH
Q 030104 87 GHRYLDVRTPEEFSAGHATG-AINVPYMYRVGSGMTKNLKFVEEV----STRF--RKHDEIIVGCQSGK-RSM 151 (183)
Q Consensus 87 ~~~lIDvR~~~e~~~ghIpg-Avnip~~~~~~~~~~~~~~~~~~~----~~~l--~~~~~ivv~c~~g~-~s~ 151 (183)
.+.++++.++..|....+.. -+++|+.+. ...+.+.+... ...+ +++.+|+|.|..|. |+.
T Consensus 58 ~~~v~nl~~e~~y~~~~~~~~~~~~~~~D~----~~P~~~~l~~~~~~i~~~l~~~~~~~VlVHC~aG~gRTG 126 (324)
T 1d5r_A 58 HYKIYNLCAERHYDTAKFNCRVAQYPFEDH----NPPQLELIKPFCEDLDQWLSEDDNHVAAIHCKAGKGRTG 126 (324)
T ss_dssp CEEEEEEESSCCCCTTSCSSCEEEEEECTT----SCCCHHHHHHHHHHHHHHHTTTSCSEEEEECSSSSHHHH
T ss_pred cEEEEEcCCCCCCChHHhCCeEEEEeecCC----CCCcHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCChhH
Confidence 37889986544454333322 345665321 11222332222 2222 34578999999886 655
No 184
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}
Probab=23.97 E-value=81 Score=22.48 Aligned_cols=30 Identities=13% Similarity=0.161 Sum_probs=24.3
Q ss_pred CCCeEEEEcC---CchHHHHHHHHHH-cCCCCee
Q 030104 136 KHDEIIVGCQ---SGKRSMMAATDLL-NGFAGIT 165 (183)
Q Consensus 136 ~~~~ivv~c~---~g~~s~~a~~~L~-~G~~~v~ 165 (183)
++++|+++++ +|.....++..|+ .|-..|.
T Consensus 97 ~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~ 130 (185)
T 2geb_A 97 EGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLK 130 (185)
T ss_dssp TTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEE
T ss_pred CCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEE
Confidence 4678888865 7888888999999 9987665
No 185
>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix}
Probab=23.93 E-value=86 Score=22.22 Aligned_cols=46 Identities=17% Similarity=0.163 Sum_probs=31.5
Q ss_pred CCCeEEEEcC---CchHHHHHHHHHH-cCCCCee---Ecc---ccHHHhhhCCCCC
Q 030104 136 KHDEIIVGCQ---SGKRSMMAATDLL-NGFAGIT---DIA---GGFAAWRQNGLPT 181 (183)
Q Consensus 136 ~~~~ivv~c~---~g~~s~~a~~~L~-~G~~~v~---~l~---GG~~~W~~~g~pv 181 (183)
++++|+++++ +|.....++..|+ .|...+. +++ +|.....+.|.|+
T Consensus 105 ~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~r~~~~~~~l~~~g~~~ 160 (178)
T 2yzk_A 105 PKGRVVVVDDVATTGTSIAKSIEVLRSNGYTVGTALVLVDRGEGAGELLARMGVRL 160 (178)
T ss_dssp CSSEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCSSHHHHHHTTTCEE
T ss_pred CCCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEcCcCHHHHHHHcCCcE
Confidence 6788999865 7888888999999 9976432 333 4455554456554
No 186
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=23.80 E-value=1e+02 Score=23.25 Aligned_cols=47 Identities=13% Similarity=0.201 Sum_probs=32.9
Q ss_pred CCCCeEEEEcC---CchHHHHHHHHHH-cCCCCee---Ec----cccHHHhhhCCCCC
Q 030104 135 RKHDEIIVGCQ---SGKRSMMAATDLL-NGFAGIT---DI----AGGFAAWRQNGLPT 181 (183)
Q Consensus 135 ~~~~~ivv~c~---~g~~s~~a~~~L~-~G~~~v~---~l----~GG~~~W~~~g~pv 181 (183)
.++++|+|+.+ +|.....++..|+ .|...+. ++ .||.....+.|.++
T Consensus 135 ~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~~~~~~~~~e~l~~~gi~v 192 (234)
T 3m3h_A 135 EKGQKVVVVEDLISTGGSAITCVEALREAGCEVLGIVSIFTYELEAGKEKLEAANVAS 192 (234)
T ss_dssp CTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHTTCCE
T ss_pred CCCCEEEEEecccchhHHHHHHHHHHHHCCCEEEEEEEEEECcCchHHHHHHhcCCCE
Confidence 46788988764 7888888999999 9975432 22 24556666677765
No 187
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=23.65 E-value=98 Score=22.46 Aligned_cols=31 Identities=13% Similarity=0.173 Sum_probs=24.6
Q ss_pred CCCeEEEEcC---CchHHHHHHHHHH-cCCCCeeE
Q 030104 136 KHDEIIVGCQ---SGKRSMMAATDLL-NGFAGITD 166 (183)
Q Consensus 136 ~~~~ivv~c~---~g~~s~~a~~~L~-~G~~~v~~ 166 (183)
++++|+++++ +|.....++..|+ .|-..|++
T Consensus 119 ~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~V~v 153 (208)
T 1wd5_A 119 KGRDVVLVDDGVATGASMEAALSVVFQEGPRRVVV 153 (208)
T ss_dssp TTSEEEEECSCBSSCHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHHHHHHHcCCCEEEE
Confidence 5678998876 6888888999999 99877653
No 188
>1z5z_A Helicase of the SNF2/RAD54 family; hydrolase, recombination, hydrolase-recombination complex; 2.00A {Sulfolobus solfataricus} SCOP: c.37.1.19
Probab=23.37 E-value=75 Score=24.25 Aligned_cols=36 Identities=11% Similarity=0.036 Sum_probs=28.3
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHH-c-CCCCeeEccccH
Q 030104 135 RKHDEIIVGCQSGKRSMMAATDLL-N-GFAGITDIAGGF 171 (183)
Q Consensus 135 ~~~~~ivv~c~~g~~s~~a~~~L~-~-G~~~v~~l~GG~ 171 (183)
..+.++||||+.-.....+...|. . |+ .+..++|+.
T Consensus 110 ~~~~kvlIFs~~~~~~~~l~~~L~~~~g~-~~~~l~G~~ 147 (271)
T 1z5z_A 110 DEGDKIAIFTQFVDMGKIIRNIIEKELNT-EVPFLYGEL 147 (271)
T ss_dssp HTTCCEEEEESCHHHHHHHHHHHHHHHCS-CCCEECTTS
T ss_pred hCCCeEEEEeccHHHHHHHHHHHHHhcCC-cEEEEECCC
Confidence 356789999998777778888887 4 88 466788875
No 189
>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1
Probab=23.28 E-value=1.2e+02 Score=22.34 Aligned_cols=31 Identities=19% Similarity=0.234 Sum_probs=23.5
Q ss_pred CCCeEEEEcC---CchHHHHHHHHHH-cCCCCeeE
Q 030104 136 KHDEIIVGCQ---SGKRSMMAATDLL-NGFAGITD 166 (183)
Q Consensus 136 ~~~~ivv~c~---~g~~s~~a~~~L~-~G~~~v~~ 166 (183)
.++.|+++++ +|.....+...|+ .|.++++.
T Consensus 123 ~~~~VllvDd~l~TG~T~~~a~~~L~~~G~~~I~~ 157 (209)
T 1i5e_A 123 EERDFIIVDPMLATGGSAVAAIDALKKRGAKSIKF 157 (209)
T ss_dssp TTSEEEEECSEESSSHHHHHHHHHHHHTTCCCEEE
T ss_pred CCCEEEEEcCCCcCHHHHHHHHHHHHHcCCCEEEE
Confidence 3567888765 7888888888888 88887763
No 190
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=23.23 E-value=1.9e+02 Score=23.86 Aligned_cols=97 Identities=14% Similarity=0.094 Sum_probs=49.4
Q ss_pred CCCcccCHHHHHHHHhCCCEEEEcCChhhHhccCCC-CceecCcccccCCCCCCCHHHHHHHHhcCCCCCeEEEEcCCch
Q 030104 70 GVPTSVPVRVAHELLQAGHRYLDVRTPEEFSAGHAT-GAINVPYMYRVGSGMTKNLKFVEEVSTRFRKHDEIIVGCQSGK 148 (183)
Q Consensus 70 ~~~~~i~~~~~~~~~~~~~~lIDvR~~~e~~~ghIp-gAvnip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv~c~~g~ 148 (183)
+.+..+|...++.+.+.++++.|.+...+... +++ ++..++.............+..+.+.+....+++|++.+. |.
T Consensus 226 Gd~~lLTlrA~~~L~~ADvV~~d~~~~~~il~-~~~~~~~~~~~~k~~~~~~~~~~~i~~~l~~~~~~G~~Vv~L~~-GD 303 (457)
T 1pjq_A 226 GDAGLLTLKGLQQIQQADIVVYDRLVSDDIMN-LVRRDADRVFVGKRAGYHCVPQEEINQILLREAQKGKRVVRLKG-GD 303 (457)
T ss_dssp SCGGGSBHHHHHHHHHCSEEEECTTSCHHHHT-TSCTTSEEEECSCC---CCCTTHHHHHHHHHHHHTTCEEEEEES-BC
T ss_pred CChHHccHHHHHHHHhCCEEEEeCCCCHHHHh-hcccCCEEEeccccccccCCCHHHHHHHHHHHHHCCCcEEEEeC-CC
Confidence 34567888888888888888889876555443 332 3333332111111111122233334444445677777643 32
Q ss_pred -----HHHHHHHHHH-cCCCCeeEccc
Q 030104 149 -----RSMMAATDLL-NGFAGITDIAG 169 (183)
Q Consensus 149 -----~s~~a~~~L~-~G~~~v~~l~G 169 (183)
+.......+. .|+ .+.++-|
T Consensus 304 P~i~g~g~~l~~~l~~~gi-~v~vvPG 329 (457)
T 1pjq_A 304 PFIFGRGGEELETLCHAGI-PFSVVPG 329 (457)
T ss_dssp TTTSSSHHHHHTTTTTTTC-CEEEECC
T ss_pred CCccCCHHHHHHHHHHCCC-CEEEeCC
Confidence 3334444555 565 4555554
No 191
>1yks_A Genome polyprotein [contains: flavivirin protease NS3 catalytic subunit]; helicase, flavivirus, DEAD-BOX, ATPase, rtpase, hydrolase; 1.80A {Yellow fever virus} SCOP: c.37.1.14 c.37.1.14 PDB: 1ymf_A*
Probab=23.16 E-value=86 Score=25.69 Aligned_cols=32 Identities=13% Similarity=-0.009 Sum_probs=27.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHH-cCCCCeeEccc
Q 030104 137 HDEIIVGCQSGKRSMMAATDLL-NGFAGITDIAG 169 (183)
Q Consensus 137 ~~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~G 169 (183)
+.+++|||++-..+..++..|. .|+ ++..+.|
T Consensus 177 ~~~~lVF~~s~~~a~~l~~~L~~~~~-~v~~lhg 209 (440)
T 1yks_A 177 KRPTAWFLPSIRAANVMAASLRKAGK-SVVVLNR 209 (440)
T ss_dssp CSCEEEECSCHHHHHHHHHHHHHTTC-CEEECCS
T ss_pred CCCEEEEeCCHHHHHHHHHHHHHcCC-CEEEecc
Confidence 5689999999888989999999 997 6777777
No 192
>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1
Probab=22.63 E-value=90 Score=22.13 Aligned_cols=30 Identities=13% Similarity=0.122 Sum_probs=24.1
Q ss_pred CCCeEEEEcC---CchHHHHHHHHHH-cCCCCee
Q 030104 136 KHDEIIVGCQ---SGKRSMMAATDLL-NGFAGIT 165 (183)
Q Consensus 136 ~~~~ivv~c~---~g~~s~~a~~~L~-~G~~~v~ 165 (183)
++++|+++++ +|.....++..|+ .|-..|.
T Consensus 94 ~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~v~ 127 (183)
T 1hgx_A 94 EGRHVLVVEDIIDTGLTMYQLLNNLQMRKPASLK 127 (183)
T ss_dssp TTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEE
T ss_pred CCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEE
Confidence 4678888765 7888888999999 9987665
No 193
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*
Probab=22.41 E-value=77 Score=22.35 Aligned_cols=30 Identities=13% Similarity=-0.027 Sum_probs=24.3
Q ss_pred CCCeEEEEcC---CchHHHHHHHHHH-cCCCCee
Q 030104 136 KHDEIIVGCQ---SGKRSMMAATDLL-NGFAGIT 165 (183)
Q Consensus 136 ~~~~ivv~c~---~g~~s~~a~~~L~-~G~~~v~ 165 (183)
++++|+++++ +|.....++..|+ .|...|.
T Consensus 119 ~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~ 152 (180)
T 1zn8_A 119 PGQRVVVVDDLLATGGTMNAACELLGRLQAEVLE 152 (180)
T ss_dssp TTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEEcCCcccHHHHHHHHHHHHHcCCEEEE
Confidence 5778988865 7888888999999 9987654
No 194
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=22.35 E-value=1.5e+02 Score=18.47 Aligned_cols=31 Identities=13% Similarity=0.142 Sum_probs=12.4
Q ss_pred eEEEEcCCchHHHHHHHHHH-cCCCCeeEccc
Q 030104 139 EIIVGCQSGKRSMMAATDLL-NGFAGITDIAG 169 (183)
Q Consensus 139 ~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~G 169 (183)
+|+++.+...........|. .||..+.....
T Consensus 6 ~ilivdd~~~~~~~l~~~l~~~~~~~v~~~~~ 37 (128)
T 1jbe_A 6 KFLVVDDFSTMRRIVRNLLKELGFNNVEEAED 37 (128)
T ss_dssp CEEEECSCHHHHHHHHHHHHHTTCCCEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHHcCCcEEEeeCC
Confidence 34444433333333444444 55433433333
No 195
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=22.12 E-value=1.4e+02 Score=18.19 Aligned_cols=37 Identities=3% Similarity=-0.015 Sum_probs=27.1
Q ss_pred HHHHHHhcCCCCCeEEEEcCCchHHHHHHHHHH-cCCC
Q 030104 126 FVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLL-NGFA 162 (183)
Q Consensus 126 ~~~~~~~~l~~~~~ivv~c~~g~~s~~a~~~L~-~G~~ 162 (183)
..+..+..+..+..+.|..+....-..+..+++ .||+
T Consensus 26 ~~kkal~~l~~G~~l~V~~dd~~a~~di~~~~~~~G~~ 63 (82)
T 3lvj_C 26 MVRKTVRNMQPGETLLIIADDPATTRDIPGFCTFMEHE 63 (82)
T ss_dssp HHHHHHHTSCTTCEEEEEECCTTHHHHHHHHHHHTTCE
T ss_pred HHHHHHHhCCCCCEEEEEECCccHHHHHHHHHHHCCCE
Confidence 455666777777778888777665566777888 9995
No 196
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=21.89 E-value=1e+02 Score=24.28 Aligned_cols=33 Identities=18% Similarity=0.179 Sum_probs=26.1
Q ss_pred CCCeEEEEcC---CchHHHHHHHHHH-cCCCCeeEcc
Q 030104 136 KHDEIIVGCQ---SGKRSMMAATDLL-NGFAGITDIA 168 (183)
Q Consensus 136 ~~~~ivv~c~---~g~~s~~a~~~L~-~G~~~v~~l~ 168 (183)
++++|+++++ +|.....++..|+ .|...|+.+.
T Consensus 216 ~gk~VlLVDDiitTG~Tl~~aa~~Lk~~Ga~~V~~~~ 252 (317)
T 1dku_A 216 EGKTAILIDDIIDTAGTITLAANALVENGAKEVYACC 252 (317)
T ss_dssp TTCEEEEECSEESSCHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCEEEEEecccCCCHHHHHHHHHHHHcCCcEEEEEE
Confidence 4577888765 7888889999999 9998876544
No 197
>3c0u_A Uncharacterized protein YAEQ; PSI-2, protein structure initiative, center for structural genomics, MCSG, structural genomics, function; 2.70A {Escherichia coli}
Probab=21.83 E-value=88 Score=22.89 Aligned_cols=42 Identities=10% Similarity=0.084 Sum_probs=25.4
Q ss_pred CCHHHHHHHHhcCCCCCeEEEEcCCchHHHHHHHHHH---cCCCCeeE
Q 030104 122 KNLKFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLL---NGFAGITD 166 (183)
Q Consensus 122 ~~~~~~~~~~~~l~~~~~ivv~c~~g~~s~~a~~~L~---~G~~~v~~ 166 (183)
++++.+++... +.++|+|||.++..+...+.... ..++|+.+
T Consensus 89 Pdekrl~KA~~---ra~~V~vy~yg~~~~~vWw~~~~~kl~r~~nl~V 133 (183)
T 3c0u_A 89 PDERRIKKACT---QAAEVALFTYNSRAAQIWWQQNQSKCVQFANLSV 133 (183)
T ss_dssp CCHHHHHHHHH---HEEEEEEEECCHHHHHHHHHTTHHHHTTCTTEEE
T ss_pred CCHHHHHHhhc---cCceEEEEecCCccHHHHHHHhHHHHhCcCCcEE
Confidence 35566666554 34689999987755444443332 56666543
No 198
>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A*
Probab=21.60 E-value=94 Score=22.53 Aligned_cols=30 Identities=13% Similarity=0.161 Sum_probs=24.2
Q ss_pred CCCeEEEEcC---CchHHHHHHHHHH-cCCCCee
Q 030104 136 KHDEIIVGCQ---SGKRSMMAATDLL-NGFAGIT 165 (183)
Q Consensus 136 ~~~~ivv~c~---~g~~s~~a~~~L~-~G~~~v~ 165 (183)
++++|+++++ +|.....++..|+ .|-..|.
T Consensus 117 ~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~ 150 (205)
T 1yfz_A 117 EGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLK 150 (205)
T ss_dssp TTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEE
T ss_pred CcCEEEEECCccCcHHHHHHHHHHHHhcCCCEEE
Confidence 4678888865 7888888999999 9987665
No 199
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=21.54 E-value=1.1e+02 Score=22.07 Aligned_cols=32 Identities=16% Similarity=0.201 Sum_probs=25.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHH-cCCCCeeEcc
Q 030104 136 KHDEIIVGCQSGKRSMMAATDLL-NGFAGITDIA 168 (183)
Q Consensus 136 ~~~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~ 168 (183)
++++|+|...+|.-...++..|. .|+ +|..+.
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~ 52 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGH-EPVAMV 52 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEE
Confidence 45788888888888888899999 998 676554
No 200
>2der_A TRNA-specific 2-thiouridylase MNMA; protein-RNA complex, transferase/RNA complex; 3.10A {Escherichia coli} PDB: 2det_A 2deu_A*
Probab=21.40 E-value=71 Score=25.97 Aligned_cols=27 Identities=30% Similarity=0.438 Sum_probs=20.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHH-cCCC
Q 030104 136 KHDEIIVGCQSGKRSMMAATDLL-NGFA 162 (183)
Q Consensus 136 ~~~~ivv~c~~g~~s~~a~~~L~-~G~~ 162 (183)
++.+|+|-..+|..|..++..|. .||+
T Consensus 16 ~~~kVvVa~SGGvDSsv~a~lL~~~G~~ 43 (380)
T 2der_A 16 TAKKVIVGMSGGVDSSVSAWLLQQQGYQ 43 (380)
T ss_dssp -CCEEEEECCSCSTTHHHHHHHHTTCCE
T ss_pred CCCEEEEEEEChHHHHHHHHHHHHcCCe
Confidence 35678888888888888888888 8874
No 201
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=21.26 E-value=96 Score=23.56 Aligned_cols=48 Identities=10% Similarity=0.123 Sum_probs=32.7
Q ss_pred CCCCCeEEEEcC---CchHHHHHHHHHH-cCCCCee---Ecc----ccHHHhhhCCCCC
Q 030104 134 FRKHDEIIVGCQ---SGKRSMMAATDLL-NGFAGIT---DIA----GGFAAWRQNGLPT 181 (183)
Q Consensus 134 l~~~~~ivv~c~---~g~~s~~a~~~L~-~G~~~v~---~l~----GG~~~W~~~g~pv 181 (183)
+.++++|+|+.+ +|.....++..|+ .|...+. +++ +|.....+.|.++
T Consensus 146 ~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~d~~~~~a~e~l~~~gi~~ 204 (243)
T 3dez_A 146 VTKGQKMVIIEDLISTGGSVLDAVAAAQREGADVLGVVAIFTYELPKATANFEKASVKL 204 (243)
T ss_dssp CCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHHTCCE
T ss_pred cCCCCEEEEEEeeccccHHHHHHHHHHHHCCCEEEEEEEEEECCCchHHHHHHhcCCCE
Confidence 346788998765 7888888999999 9986442 223 4555555556654
No 202
>4etm_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.60A {Bacillus subtilis}
Probab=21.10 E-value=50 Score=23.68 Aligned_cols=37 Identities=24% Similarity=0.435 Sum_probs=24.7
Q ss_pred CeEEEEcCCch-HHHHHHHHHH-----cCCC-CeeEccccHHHh
Q 030104 138 DEIIVGCQSGK-RSMMAATDLL-----NGFA-GITDIAGGFAAW 174 (183)
Q Consensus 138 ~~ivv~c~~g~-~s~~a~~~L~-----~G~~-~v~~l~GG~~~W 174 (183)
.+|+|+|.+.. ||..|-..|+ .|+. ++.+-.-|+.+|
T Consensus 19 ~kVLFVCtGNiCRSpmAE~i~r~~~~~~gl~~~~~v~SAGt~~~ 62 (173)
T 4etm_A 19 ISVLFVCLGNICRSPMAEAIFRDLAAKKGLEGKIKADSAGIGGW 62 (173)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCT
T ss_pred cEEEEEeCCcchhhHHHHHHHHHHHHHcCCCCceEEeccccccC
Confidence 47999997654 8876665554 4554 466666676666
No 203
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=20.98 E-value=1e+02 Score=19.84 Aligned_cols=38 Identities=13% Similarity=0.102 Sum_probs=26.0
Q ss_pred HHHHHHHhcCCCCCeEEEEcCCchHHHHHHHHHH-cCCC
Q 030104 125 KFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLL-NGFA 162 (183)
Q Consensus 125 ~~~~~~~~~l~~~~~ivv~c~~g~~s~~a~~~L~-~G~~ 162 (183)
-..+..++.+..+..+.|..+....-..+-.+++ .||+
T Consensus 42 lktkkaL~~l~~Ge~L~Vl~dd~~a~~dIp~~~~~~G~~ 80 (97)
T 1je3_A 42 VATLEAMPQLKKGEILEVVSDCPQSINNIPLDARNHGYT 80 (97)
T ss_dssp HHHHHHTTTCCSSCEEEEEEBCSSSSCHHHHHHHHHTCS
T ss_pred HHHHHHHHcCCCCCEEEEEECCcchHHHHHHHHHHCCCE
Confidence 4556677778777777777766553345667788 9985
No 204
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=20.94 E-value=1.3e+02 Score=21.51 Aligned_cols=31 Identities=10% Similarity=0.036 Sum_probs=24.9
Q ss_pred cCCCCCeEEEEcCCchHH--HHHHHHHH-cCCCC
Q 030104 133 RFRKHDEIIVGCQSGKRS--MMAATDLL-NGFAG 163 (183)
Q Consensus 133 ~l~~~~~ivv~c~~g~~s--~~a~~~L~-~G~~~ 163 (183)
.+.+++.+++++++|... ...+..++ .|.+-
T Consensus 74 ~i~~~D~vii~S~Sg~n~~~ie~A~~ake~G~~v 107 (170)
T 3jx9_A 74 TLHAVDRVLIFTPDTERSDLLASLARYDAWHTPY 107 (170)
T ss_dssp CCCTTCEEEEEESCSCCHHHHHHHHHHHHHTCCE
T ss_pred CCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCcE
Confidence 577888999999999854 47888888 99853
No 205
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=20.85 E-value=1.4e+02 Score=20.82 Aligned_cols=44 Identities=16% Similarity=0.119 Sum_probs=27.1
Q ss_pred HHHHHHHHhcCCCCCeEEEEcCCch--HHHHHHHHHH-cCCCCeeEcc
Q 030104 124 LKFVEEVSTRFRKHDEIIVGCQSGK--RSMMAATDLL-NGFAGITDIA 168 (183)
Q Consensus 124 ~~~~~~~~~~l~~~~~ivv~c~~g~--~s~~a~~~L~-~G~~~v~~l~ 168 (183)
.+.+++..+.+.+.++|+++..++. -+..++..|. .|. ++..+.
T Consensus 26 ~~~l~~~~~~i~~a~~I~i~G~G~S~~~a~~~~~~l~~~g~-~~~~~~ 72 (187)
T 3sho_A 26 PEAIEAAVEAICRADHVIVVGMGFSAAVAVFLGHGLNSLGI-RTTVLT 72 (187)
T ss_dssp HHHHHHHHHHHHHCSEEEEECCGGGHHHHHHHHHHHHHTTC-CEEEEC
T ss_pred HHHHHHHHHHHHhCCEEEEEecCchHHHHHHHHHHHHhcCC-CEEEec
Confidence 3455555555545567777765443 3445666777 887 677666
No 206
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}
Probab=20.77 E-value=86 Score=22.41 Aligned_cols=47 Identities=17% Similarity=0.184 Sum_probs=32.9
Q ss_pred CCCCeEEEEcC---CchHHHHHHHHHH-cCCCCee---Ecc----ccHHHhhhCCCCC
Q 030104 135 RKHDEIIVGCQ---SGKRSMMAATDLL-NGFAGIT---DIA----GGFAAWRQNGLPT 181 (183)
Q Consensus 135 ~~~~~ivv~c~---~g~~s~~a~~~L~-~G~~~v~---~l~----GG~~~W~~~g~pv 181 (183)
.++++|+++++ +|.....++..|+ .|.+.|. +++ ||.....+.|.|+
T Consensus 124 ~~gk~VLlVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~~~~~~l~~~g~~v 181 (190)
T 2dy0_A 124 KPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRLEKQGITS 181 (190)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEEGGGCHHHHHHTTTCEE
T ss_pred CCcCEEEEEEccccchHHHHHHHHHHHHcCCEEEEEEEEEEccCcchHHHHhhCCCcE
Confidence 36788999875 7888888999999 9987653 222 4555555556654
No 207
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=20.73 E-value=1.7e+02 Score=18.61 Aligned_cols=38 Identities=13% Similarity=0.051 Sum_probs=23.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHH-cCCCCeeEccccHHHh
Q 030104 136 KHDEIIVGCQSGKRSMMAATDLL-NGFAGITDIAGGFAAW 174 (183)
Q Consensus 136 ~~~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~GG~~~W 174 (183)
+..+|+++.+...........|. .|| +|.....|-.++
T Consensus 14 ~~~~ilivdd~~~~~~~l~~~L~~~g~-~v~~~~~~~~al 52 (138)
T 2b4a_A 14 QPFRVTLVEDEPSHATLIQYHLNQLGA-EVTVHPSGSAFF 52 (138)
T ss_dssp CCCEEEEECSCHHHHHHHHHHHHHTTC-EEEEESSHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHHcCC-EEEEeCCHHHHH
Confidence 34566666666666666777777 887 566555555444
No 208
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A*
Probab=20.65 E-value=1.1e+02 Score=23.87 Aligned_cols=38 Identities=13% Similarity=0.266 Sum_probs=27.8
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHH-c----CCCCe--eEccccH
Q 030104 134 FRKHDEIIVGCQSGKRSMMAATDLL-N----GFAGI--TDIAGGF 171 (183)
Q Consensus 134 l~~~~~ivv~c~~g~~s~~a~~~L~-~----G~~~v--~~l~GG~ 171 (183)
+.++++|+|.+.+|..|..++..|. . |++++ ..++-|+
T Consensus 21 ~~~~~~vlva~SGG~DS~~Ll~ll~~~~~~~g~~~v~av~vd~g~ 65 (317)
T 1wy5_A 21 FSGERRVLIAFSGGVDSVVLTDVLLKLKNYFSLKEVALAHFNHML 65 (317)
T ss_dssp CSSCCEEEEECCSSHHHHHHHHHHHHSTTTTTCSEEEEEEEECCS
T ss_pred CCCCCEEEEEecchHHHHHHHHHHHHHHHHcCCCEEEEEEEECCC
Confidence 5667889999999999988887777 5 77524 3556554
No 209
>3oiy_A Reverse gyrase helicase domain; topoisomerase, DNA supercoiling, archaea, isomeras; 2.35A {Thermotoga maritima} PDB: 3p4y_A 3p4x_A*
Probab=20.59 E-value=1.2e+02 Score=23.99 Aligned_cols=43 Identities=14% Similarity=0.006 Sum_probs=31.2
Q ss_pred HHHHHHHhcCCCCCeEEEEcCCchHHHHHHHHHH-cCCCCee-Ecccc
Q 030104 125 KFVEEVSTRFRKHDEIIVGCQSGKRSMMAATDLL-NGFAGIT-DIAGG 170 (183)
Q Consensus 125 ~~~~~~~~~l~~~~~ivv~c~~g~~s~~a~~~L~-~G~~~v~-~l~GG 170 (183)
+.+..++.. .+.+++|||++-..+..++..|. .|+. +. .+.|.
T Consensus 242 ~~l~~~l~~--~~~~~lVF~~~~~~~~~l~~~L~~~~~~-~~~~~h~~ 286 (414)
T 3oiy_A 242 EKLVELLEI--FRDGILIFAQTEEEGKELYEYLKRFKFN-VGETWSEF 286 (414)
T ss_dssp HHHHHHHHH--HCSSEEEEESSHHHHHHHHHHHHHTTCC-EEESSSCH
T ss_pred HHHHHHHHH--cCCCEEEEECCHHHHHHHHHHHHHcCCc-eehhhcCc
Confidence 344444444 24789999999888889999999 9984 55 66664
No 210
>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A*
Probab=20.57 E-value=1e+02 Score=22.90 Aligned_cols=30 Identities=3% Similarity=-0.043 Sum_probs=24.5
Q ss_pred CCCeEEEEcC---CchHHHHHHHHHH-cCCCCee
Q 030104 136 KHDEIIVGCQ---SGKRSMMAATDLL-NGFAGIT 165 (183)
Q Consensus 136 ~~~~ivv~c~---~g~~s~~a~~~L~-~G~~~v~ 165 (183)
++++|+++++ +|.....++..|+ .|-..|.
T Consensus 102 ~Gk~VLLVDDii~TG~Tl~~a~~~L~~~Ga~~V~ 135 (220)
T 1tc1_A 102 EGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLK 135 (220)
T ss_dssp TTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEE
T ss_pred CCCEEEEEeCccCcHHHHHHHHHHHHhcCCCEEE
Confidence 4678888865 7888888999999 9987765
No 211
>1pdo_A Mannose permease; phosphoenolpyruvate dependent phosphotransferase system, phosphotransferase; 1.70A {Escherichia coli} SCOP: c.54.1.1 PDB: 1vrc_A 1vsq_A* 2jzo_A 2jzn_A
Probab=20.28 E-value=2e+02 Score=19.21 Aligned_cols=44 Identities=14% Similarity=0.192 Sum_probs=25.5
Q ss_pred HHHHHHHhcCCCCCeEEEEcCC-chHHHHHHHHHH-cCCCCeeEccc
Q 030104 125 KFVEEVSTRFRKHDEIIVGCQS-GKRSMMAATDLL-NGFAGITDIAG 169 (183)
Q Consensus 125 ~~~~~~~~~l~~~~~ivv~c~~-g~~s~~a~~~L~-~G~~~v~~l~G 169 (183)
+.+++..+.++.++.|+|.++- |..-..++..+. . ..++.++.|
T Consensus 46 ~~i~~~i~~~~~~~gvliLtDl~GGSp~n~a~~~~~~-~~~v~vi~G 91 (135)
T 1pdo_A 46 EKYNAQLAKLDTTKGVLFLVDTWGGSPFNAASRIVVD-KEHYEVIAG 91 (135)
T ss_dssp HHHHHHHTTSCCTTCEEEEESSTTSHHHHHHHHHHTT-CTTEEEEES
T ss_pred HHHHHHHHhcCCCCCEEEEEECCCCCHHHHHHHHHhc-cCCEEEEeC
Confidence 3445555566666778888885 433233444444 3 347777765
No 212
>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*
Probab=20.25 E-value=89 Score=22.37 Aligned_cols=31 Identities=10% Similarity=0.094 Sum_probs=24.8
Q ss_pred CCCCeEEEEcC---CchHHHHHHHHHH-cCCCCee
Q 030104 135 RKHDEIIVGCQ---SGKRSMMAATDLL-NGFAGIT 165 (183)
Q Consensus 135 ~~~~~ivv~c~---~g~~s~~a~~~L~-~G~~~v~ 165 (183)
.++++|+++++ +|.....++..|+ .|...|.
T Consensus 118 ~~gk~VllVDDvitTG~Tl~~a~~~L~~~Ga~~V~ 152 (197)
T 1y0b_A 118 SDQDHVLIIDDFLANGQAAHGLVSIVKQAGASIAG 152 (197)
T ss_dssp CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEE
T ss_pred CCcCEEEEEEcccccCHHHHHHHHHHHHCCCEEEE
Confidence 36788999875 7888888999999 9987654
No 213
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=20.20 E-value=1.6e+02 Score=20.86 Aligned_cols=38 Identities=16% Similarity=0.121 Sum_probs=23.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHH-cCCCCeeEccccHHHh
Q 030104 137 HDEIIVGCQSGKRSMMAATDLL-NGFAGITDIAGGFAAW 174 (183)
Q Consensus 137 ~~~ivv~c~~g~~s~~a~~~L~-~G~~~v~~l~GG~~~W 174 (183)
..+|+|+.+.......+...|. .||..|.....|-.++
T Consensus 61 ~~~ILiVdDd~~~~~~l~~~L~~~g~~~v~~a~~~~eal 99 (206)
T 3mm4_A 61 GKRVLVVDDNFISRKVATGKLKKMGVSEVEQCDSGKEAL 99 (206)
T ss_dssp TCEEEEECSCHHHHHHHHHHHHHTTCSEEEEESSHHHHH
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCCCeeeeeCCHHHHH
Confidence 3467777666655556667777 8875566555555444
Done!