BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 030109
         (183 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|356526807|ref|XP_003532008.1| PREDICTED: proteasome subunit beta type-1-like [Glycine max]
          Length = 223

 Score =  338 bits (868), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 159/171 (92%), Positives = 167/171 (97%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           A+KCVMASSGFQADVKALQK+L+ARHLIYQHQHNKQMSCP MAQLLSNTLYYKRFFPYY+
Sbjct: 53  AEKCVMASSGFQADVKALQKVLSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYA 112

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FNVLGGLDNEGKGCV+TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA
Sbjct: 113 FNVLGGLDNEGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 172

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           VTPLSEAEAVDLVKT FASATERDIYTGDK+EIV+LN  GIHREYM+LRKD
Sbjct: 173 VTPLSEAEAVDLVKTVFASATERDIYTGDKVEIVILNASGIHREYMDLRKD 223


>gi|357454307|ref|XP_003597434.1| Proteasome subunit beta type [Medicago truncatula]
 gi|355486482|gb|AES67685.1| Proteasome subunit beta type [Medicago truncatula]
          Length = 231

 Score =  335 bits (860), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 158/171 (92%), Positives = 167/171 (97%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           A+KCVMASSGFQADVKALQK+L+ARHL YQHQHNKQMSCP MAQLLSNTLYYKRFFPYYS
Sbjct: 61  AEKCVMASSGFQADVKALQKVLSARHLTYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYS 120

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FNVLGGLD+EGKGCV+TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA
Sbjct: 121 FNVLGGLDSEGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 180

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           VTPLSEAEAVDLVKT FASATERDIYTGDK+EIV+LN GGIHRE+M+LRKD
Sbjct: 181 VTPLSEAEAVDLVKTVFASATERDIYTGDKVEIVILNAGGIHREFMDLRKD 231


>gi|351734454|ref|NP_001238324.1| uncharacterized protein LOC100306148 [Glycine max]
 gi|255627685|gb|ACU14187.1| unknown [Glycine max]
          Length = 223

 Score =  335 bits (858), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 158/171 (92%), Positives = 166/171 (97%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           A+KCVMASSGFQADVKALQK+L+ARHLIYQHQHNKQMSCP MAQLLSNTLYYKRFFPYY+
Sbjct: 53  AEKCVMASSGFQADVKALQKVLSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYA 112

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FNVLGGLDNEGKGCV+TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA
Sbjct: 113 FNVLGGLDNEGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 172

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           VTPLSEAEAVDLVKT FASATERDIYTGDK+EIVVLN  GI REYM+L+KD
Sbjct: 173 VTPLSEAEAVDLVKTVFASATERDIYTGDKVEIVVLNASGIRREYMDLKKD 223


>gi|17380185|sp|O82531.1|PSB1_PETHY RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S
           proteasome alpha subunit F; AltName: Full=20S proteasome
           subunit beta-6
 gi|3608485|gb|AAC35983.1| proteasome beta subunit [Petunia x hybrida]
          Length = 223

 Score =  334 bits (857), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 157/171 (91%), Positives = 165/171 (96%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           ADKCVMASSGFQADV+ALQK+LA+RHLIYQHQHNKQMSCP M QLLSNTLYYKRFFPYYS
Sbjct: 53  ADKCVMASSGFQADVRALQKVLASRHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYS 112

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FNVLGGLD+EGKGCV+TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA
Sbjct: 113 FNVLGGLDSEGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 172

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           VTPLSEAEA+DLVKTCFASATERDIYTGD+LEIV+LN  GI RE MELRKD
Sbjct: 173 VTPLSEAEAIDLVKTCFASATERDIYTGDRLEIVILNASGIRREEMELRKD 223


>gi|388496148|gb|AFK36140.1| unknown [Medicago truncatula]
          Length = 237

 Score =  333 bits (855), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 157/170 (92%), Positives = 166/170 (97%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           A+KCVMASSGFQADVKALQK+L+ARHL YQHQHNKQMSCP MAQLLSNTLYYKRFFPYYS
Sbjct: 53  AEKCVMASSGFQADVKALQKVLSARHLTYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYS 112

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FNVLGGLD+EGKGCV+TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA
Sbjct: 113 FNVLGGLDSEGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 172

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRK 182
           VTPLSEAEAVDLVKT FASATERDIYTGDK+EIV+LN GGIHRE+M+LRK
Sbjct: 173 VTPLSEAEAVDLVKTVFASATERDIYTGDKVEIVILNAGGIHREFMDLRK 222


>gi|388505884|gb|AFK41008.1| unknown [Lotus japonicus]
          Length = 223

 Score =  333 bits (853), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 158/171 (92%), Positives = 164/171 (95%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           A+K VMASSGFQADVKALQK+L+ARHLIYQHQHNKQMSCP MAQLLSNTLYYKRFFPYYS
Sbjct: 53  AEKSVMASSGFQADVKALQKVLSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYS 112

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FNVLGGLD+EGKGCV+TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA
Sbjct: 113 FNVLGGLDSEGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 172

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           VTPLSE EAVDLVKT FASATERDIYTGDKLEIV+LN  GI REYMELRKD
Sbjct: 173 VTPLSETEAVDLVKTVFASATERDIYTGDKLEIVILNASGIRREYMELRKD 223


>gi|357492211|ref|XP_003616394.1| Proteasome subunit beta type [Medicago truncatula]
 gi|355517729|gb|AES99352.1| Proteasome subunit beta type [Medicago truncatula]
          Length = 223

 Score =  331 bits (848), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 155/171 (90%), Positives = 165/171 (96%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           A+KCVMASSGFQADVKALQK+L+ARHL YQHQHNKQMSCP MAQLLSNTLYYKRFFPYYS
Sbjct: 53  AEKCVMASSGFQADVKALQKVLSARHLTYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYS 112

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FNVLGGLD+EGKGCV+TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA
Sbjct: 113 FNVLGGLDSEGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 172

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           VTPLSE EAVDLVKT FASATERDIYTGDK+EIV+LN  GIHR++M+LRKD
Sbjct: 173 VTPLSETEAVDLVKTVFASATERDIYTGDKVEIVILNASGIHRDFMDLRKD 223


>gi|366984552|gb|AEX09185.1| proteasome subunit beta type 1 [Gossypium hirsutum]
          Length = 223

 Score =  331 bits (848), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 161/189 (85%), Positives = 171/189 (90%), Gaps = 6/189 (3%)

Query: 1   MGSFFYILTS-----CR-ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGM 54
           M + + ILT      C+ ADKCVMASSGFQADV+ALQK LAARHLIYQHQHNKQMSCP M
Sbjct: 35  MSTGYNILTREYSKICKLADKCVMASSGFQADVRALQKQLAARHLIYQHQHNKQMSCPAM 94

Query: 55  AQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 114
           AQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV TYDAVGSYE+VGYSSQGSGSTLIMPF
Sbjct: 95  AQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVLTYDAVGSYEKVGYSSQGSGSTLIMPF 154

Query: 115 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIH 174
           LDNQLKSPSPLLLPAQDAVTPL EAEA+DLVKT FASA+ERDIYTGDKLE+V++N  GI 
Sbjct: 155 LDNQLKSPSPLLLPAQDAVTPLVEAEAIDLVKTVFASASERDIYTGDKLELVIINAAGIR 214

Query: 175 REYMELRKD 183
           REYMELRKD
Sbjct: 215 REYMELRKD 223


>gi|225453909|ref|XP_002279266.1| PREDICTED: proteasome subunit beta type-1 [Vitis vinifera]
 gi|296089152|emb|CBI38855.3| unnamed protein product [Vitis vinifera]
          Length = 223

 Score =  330 bits (847), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 163/189 (86%), Positives = 171/189 (90%), Gaps = 6/189 (3%)

Query: 1   MGSFFYILTS-----CR-ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGM 54
           M + + ILT      C+ ADKCVMASSGFQADV+ALQK LAARHLIYQHQHNKQMSCP M
Sbjct: 35  MSTGYNILTRDYSKICKLADKCVMASSGFQADVRALQKHLAARHLIYQHQHNKQMSCPAM 94

Query: 55  AQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 114
           AQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV+TYDAVGSYE+VGYSSQGSGSTLIMPF
Sbjct: 95  AQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVFTYDAVGSYEKVGYSSQGSGSTLIMPF 154

Query: 115 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIH 174
           LDNQLKSPSPLLLPA DAVTPLSE EAVDLVKT FASATERDIYTGDKLEIV+LN  GI 
Sbjct: 155 LDNQLKSPSPLLLPALDAVTPLSEPEAVDLVKTVFASATERDIYTGDKLEIVILNASGIR 214

Query: 175 REYMELRKD 183
           REYM+LRKD
Sbjct: 215 REYMDLRKD 223


>gi|449525251|ref|XP_004169631.1| PREDICTED: proteasome subunit beta type-1-like, partial [Cucumis
           sativus]
          Length = 171

 Score =  320 bits (821), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 151/171 (88%), Positives = 161/171 (94%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           ADK V+ASSGFQADVKALQK L+ARHLIYQHQHNKQMSCP MAQLLSNTLYYKRFFPYY+
Sbjct: 1   ADKAVLASSGFQADVKALQKALSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYA 60

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FNVLGGLD+EGKGCV+TYDAVGSYERVGYS+QGSGSTLI PFLDNQLKSPSPLLLPAQD+
Sbjct: 61  FNVLGGLDSEGKGCVFTYDAVGSYERVGYSAQGSGSTLITPFLDNQLKSPSPLLLPAQDS 120

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            TPLSEAEA+DLVKT FASATERDIYTGDKLEIVVLN  G+ REYM LR+D
Sbjct: 121 STPLSEAEAIDLVKTVFASATERDIYTGDKLEIVVLNADGLRREYMNLRED 171


>gi|255541320|ref|XP_002511724.1| proteasome subunit beta type, putative [Ricinus communis]
 gi|223548904|gb|EEF50393.1| proteasome subunit beta type, putative [Ricinus communis]
          Length = 223

 Score =  320 bits (821), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 153/171 (89%), Positives = 161/171 (94%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           A+K VMASSGFQADV+ALQK L A+HLIYQHQHNKQMSCP M QLLSNTLY+KRFFPYY+
Sbjct: 53  AEKSVMASSGFQADVQALQKHLKAKHLIYQHQHNKQMSCPAMGQLLSNTLYFKRFFPYYA 112

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FNVLGGLD+EGKGCVYTYDAVGSYERVGYS+QGSGSTLIMPFLDNQLKSPSPLLLPAQDA
Sbjct: 113 FNVLGGLDSEGKGCVYTYDAVGSYERVGYSAQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 172

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           VTPLSE EAVDLVKT FASATERDIYTGDK+EIVVLN  GI REYMELRKD
Sbjct: 173 VTPLSEPEAVDLVKTVFASATERDIYTGDKVEIVVLNADGIRREYMELRKD 223


>gi|449432245|ref|XP_004133910.1| PREDICTED: proteasome subunit beta type-1-like [Cucumis sativus]
          Length = 223

 Score =  319 bits (818), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 151/171 (88%), Positives = 161/171 (94%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           ADK V+ASSGFQADVKALQK L+ARHLIYQHQHNKQMSCP MAQLLSNTLYYKRFFPYY+
Sbjct: 53  ADKAVLASSGFQADVKALQKALSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYA 112

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FNVLGGLD+EGKGCV+TYDAVGSYERVGYS+QGSGSTLI PFLDNQLKSPSPLLLPAQD+
Sbjct: 113 FNVLGGLDSEGKGCVFTYDAVGSYERVGYSAQGSGSTLITPFLDNQLKSPSPLLLPAQDS 172

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            TPLSEAEA+DLVKT FASATERDIYTGDKLEIVVLN  G+ REYM LR+D
Sbjct: 173 STPLSEAEAIDLVKTVFASATERDIYTGDKLEIVVLNADGLRREYMNLRED 223


>gi|116780814|gb|ABK21828.1| unknown [Picea sitchensis]
 gi|116783100|gb|ABK22793.1| unknown [Picea sitchensis]
 gi|224284319|gb|ACN39895.1| unknown [Picea sitchensis]
 gi|224285431|gb|ACN40438.1| unknown [Picea sitchensis]
          Length = 229

 Score =  313 bits (802), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 147/171 (85%), Positives = 158/171 (92%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           ADKCVMASSGFQADVKALQK L+ARHLIYQHQHNKQMSCP MAQLLSNTLYYKRFFPYYS
Sbjct: 59  ADKCVMASSGFQADVKALQKNLSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYS 118

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FNVLGGLDNEGKGCV+TYDAVGSYERVGY +QG+G TL+MP LDNQLKSPSPLLLPAQDA
Sbjct: 119 FNVLGGLDNEGKGCVFTYDAVGSYERVGYGAQGTGGTLMMPVLDNQLKSPSPLLLPAQDA 178

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            TPLSE+EAVDLVK  FASA ERDIYTGD LEIVV+N  G+ RE++ELR+D
Sbjct: 179 TTPLSESEAVDLVKDVFASAAERDIYTGDGLEIVVVNAEGVKREFLELRRD 229


>gi|224130004|ref|XP_002320726.1| predicted protein [Populus trichocarpa]
 gi|222861499|gb|EEE99041.1| predicted protein [Populus trichocarpa]
          Length = 223

 Score =  311 bits (796), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 150/189 (79%), Positives = 166/189 (87%), Gaps = 6/189 (3%)

Query: 1   MGSFFYILTS-----CR-ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGM 54
           M + + ILT      C+ ADKC+MASSGFQADVKALQK+L A+HLIYQHQHNKQMSCP M
Sbjct: 35  MSTGYNILTRDYSKICKLADKCLMASSGFQADVKALQKVLGAKHLIYQHQHNKQMSCPAM 94

Query: 55  AQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 114
           A+LLSNTLYYKRFFPYY+FNVL G D EGKGCVYTYDAVGSYE+VGYS+QGSG+ LIMP 
Sbjct: 95  ARLLSNTLYYKRFFPYYTFNVLVGFDEEGKGCVYTYDAVGSYEKVGYSAQGSGAKLIMPV 154

Query: 115 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIH 174
           LDNQLKSPSPLLLPAQDAVTPL+EAEA+D+VK  FASATERDIYTGDKLEIV++N  GI 
Sbjct: 155 LDNQLKSPSPLLLPAQDAVTPLTEAEAIDVVKDVFASATERDIYTGDKLEIVIVNADGIR 214

Query: 175 REYMELRKD 183
           REY ELRKD
Sbjct: 215 REYAELRKD 223


>gi|414589907|tpg|DAA40478.1| TPA: hypothetical protein ZEAMMB73_835212 [Zea mays]
          Length = 188

 Score =  310 bits (794), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 144/171 (84%), Positives = 159/171 (92%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           ADKCV+ASSGFQ D+KALQK LAAR L+YQHQHNK+MSCP MAQLLSNTLYYKRFFPYY+
Sbjct: 18  ADKCVLASSGFQGDIKALQKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYA 77

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FNVLGGLD+EGKGCV+TYDAVGSYER GYS+QG+GSTLIMP LDNQLKSPSPLLLP +DA
Sbjct: 78  FNVLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGSTLIMPVLDNQLKSPSPLLLPVRDA 137

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           VTPLSE+EA+DLVK  FASATERDIYTGDKLEIVV+NK G  REY++LRKD
Sbjct: 138 VTPLSESEAIDLVKDVFASATERDIYTGDKLEIVVINKAGTMREYIDLRKD 188


>gi|224067752|ref|XP_002302536.1| predicted protein [Populus trichocarpa]
 gi|118484887|gb|ABK94310.1| unknown [Populus trichocarpa]
 gi|222844262|gb|EEE81809.1| predicted protein [Populus trichocarpa]
          Length = 223

 Score =  310 bits (794), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 145/171 (84%), Positives = 158/171 (92%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           ADKC+MASSGFQADV+ALQK+L A+HLIYQHQHNKQMSCP MA+LLSNTLYYKRFFPYY+
Sbjct: 53  ADKCLMASSGFQADVRALQKVLGAKHLIYQHQHNKQMSCPAMARLLSNTLYYKRFFPYYT 112

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FNVL G D EGKGCVYTYDAVGSYE+VGYS+QGSG+ LIMP LDNQLKSPSPLLLPAQDA
Sbjct: 113 FNVLVGFDEEGKGCVYTYDAVGSYEKVGYSAQGSGAKLIMPVLDNQLKSPSPLLLPAQDA 172

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           VTPLSEAEA+D+VK  FASATERDIYTGDKLEIV+LN  G+ REY ELRKD
Sbjct: 173 VTPLSEAEAIDVVKDVFASATERDIYTGDKLEIVILNADGMRREYAELRKD 223


>gi|242049776|ref|XP_002462632.1| hypothetical protein SORBIDRAFT_02g029260 [Sorghum bicolor]
 gi|241926009|gb|EER99153.1| hypothetical protein SORBIDRAFT_02g029260 [Sorghum bicolor]
          Length = 221

 Score =  310 bits (793), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 144/171 (84%), Positives = 159/171 (92%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           ADKCV+ASSGFQ D+KAL K LAAR L+YQHQHNK+MSCP MAQLLSNTLYYKRFFPYY+
Sbjct: 51  ADKCVLASSGFQGDIKALHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYA 110

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FNVLGGLD+EGKGCV+TYDAVGSYER GYS+QG+GSTL+MP LDNQLKSPSPLLLPA+DA
Sbjct: 111 FNVLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGSTLMMPVLDNQLKSPSPLLLPARDA 170

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           VTPLSE+EA+DLVK  FASATERDIYTGDKLEIVV+NK G  REY+ELRKD
Sbjct: 171 VTPLSESEAIDLVKDVFASATERDIYTGDKLEIVVINKAGTKREYIELRKD 221


>gi|226531171|ref|NP_001152701.1| proteasome subunit beta type 1 [Zea mays]
 gi|194701432|gb|ACF84800.1| unknown [Zea mays]
 gi|195605546|gb|ACG24603.1| proteasome subunit beta type 1 [Zea mays]
 gi|195659171|gb|ACG49053.1| proteasome subunit beta type 1 [Zea mays]
 gi|223974469|gb|ACN31422.1| unknown [Zea mays]
 gi|414589908|tpg|DAA40479.1| TPA: proteasome subunit beta type [Zea mays]
          Length = 221

 Score =  310 bits (793), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 144/171 (84%), Positives = 159/171 (92%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           ADKCV+ASSGFQ D+KALQK LAAR L+YQHQHNK+MSCP MAQLLSNTLYYKRFFPYY+
Sbjct: 51  ADKCVLASSGFQGDIKALQKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYA 110

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FNVLGGLD+EGKGCV+TYDAVGSYER GYS+QG+GSTLIMP LDNQLKSPSPLLLP +DA
Sbjct: 111 FNVLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGSTLIMPVLDNQLKSPSPLLLPVRDA 170

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           VTPLSE+EA+DLVK  FASATERDIYTGDKLEIVV+NK G  REY++LRKD
Sbjct: 171 VTPLSESEAIDLVKDVFASATERDIYTGDKLEIVVINKAGTMREYIDLRKD 221


>gi|357159246|ref|XP_003578386.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1-like
           [Brachypodium distachyon]
          Length = 221

 Score =  309 bits (791), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 144/169 (85%), Positives = 158/169 (93%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           KCV+ASSGFQ D+KALQK LAAR L+YQHQHNK+MSCP MAQLLSNTLYYKRFFPYY+FN
Sbjct: 53  KCVIASSGFQGDIKALQKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFN 112

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 134
           VLGGLD+EGKGCVY+YDAVGSYER GYS+QG+GSTLIMP LDNQLKSPSPLLLPA+DAVT
Sbjct: 113 VLGGLDSEGKGCVYSYDAVGSYERTGYSAQGTGSTLIMPVLDNQLKSPSPLLLPARDAVT 172

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           PLSE+EAVDLVK  FASATERDIYTGDK+EIVV+NK G  REY+ELRKD
Sbjct: 173 PLSESEAVDLVKDVFASATERDIYTGDKVEIVVINKAGTRREYIELRKD 221


>gi|414886158|tpg|DAA62172.1| TPA: proteasome subunit beta type [Zea mays]
          Length = 221

 Score =  308 bits (788), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 144/171 (84%), Positives = 159/171 (92%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           ADKCV+ASSGFQ D+KAL K LAAR L+YQHQHNK+MSCP MAQLLSNTLYYKRFFPYY+
Sbjct: 51  ADKCVLASSGFQGDIKALHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYA 110

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FNVLGGLD+EGKGCV+TYDAVGSYER GYS+QG+GSTLIMP LDNQLKSPSPLLLPA+DA
Sbjct: 111 FNVLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGSTLIMPVLDNQLKSPSPLLLPARDA 170

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           VTPLSE+EA+DLVK  FASATERDIYTGDKLEIVV+NK G  REY++LRKD
Sbjct: 171 VTPLSESEAIDLVKDVFASATERDIYTGDKLEIVVINKVGTKREYIDLRKD 221


>gi|118488258|gb|ABK95948.1| unknown [Populus trichocarpa]
          Length = 223

 Score =  308 bits (788), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 149/189 (78%), Positives = 165/189 (87%), Gaps = 6/189 (3%)

Query: 1   MGSFFYILTS-----CR-ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGM 54
           M + + ILT      C+ ADKC+MASSGFQADVKALQK+L A+HLIYQHQHNKQMSCP M
Sbjct: 35  MSTGYNILTRDYSKICKLADKCLMASSGFQADVKALQKVLGAKHLIYQHQHNKQMSCPAM 94

Query: 55  AQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 114
           A+LLSNTLYYKRFFPYY+FNVL G D EGKGCVYTYDAVGSYE+VGYS+QGSG+ LIMP 
Sbjct: 95  ARLLSNTLYYKRFFPYYTFNVLVGFDEEGKGCVYTYDAVGSYEKVGYSAQGSGAKLIMPV 154

Query: 115 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIH 174
           LDNQLKSPSPLLLPA DAVTPL+EAEA+D+VK  FASATERDIYTGDKLEIV++N  GI 
Sbjct: 155 LDNQLKSPSPLLLPALDAVTPLTEAEAIDVVKDVFASATERDIYTGDKLEIVIVNADGIR 214

Query: 175 REYMELRKD 183
           REY ELRKD
Sbjct: 215 REYAELRKD 223


>gi|600387|emb|CAA47753.1| proteosome subunit [Arabidopsis thaliana]
          Length = 230

 Score =  307 bits (787), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 144/171 (84%), Positives = 157/171 (91%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           AD+ V++SSGFQADVKALQK+L +RHLIYQHQHNKQMSCP MAQLLSNTLY+KRFFPYY+
Sbjct: 60  ADRAVLSSSGFQADVKALQKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYA 119

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FNVLGGLD EGKGCV+TYDAVGSYERVGY +QGSGSTLIMPFLDNQLKSPSPLLLP QD+
Sbjct: 120 FNVLGGLDEEGKGCVFTYDAVGSYERVGYGAQGSGSTLIMPFLDNQLKSPSPLLLPKQDS 179

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            TPLSEAEAVDLVKT FASATERDIYTGDKLEI++L   GI  E M+LRKD
Sbjct: 180 NTPLSEAEAVDLVKTVFASATERDIYTGDKLEIMILKADGIKTELMDLRKD 230


>gi|125564290|gb|EAZ09670.1| hypothetical protein OsI_31953 [Oryza sativa Indica Group]
          Length = 178

 Score =  307 bits (786), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 143/171 (83%), Positives = 156/171 (91%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           ADKC +ASSGFQ D+KAL K LAAR L+YQHQHNK+MSCP MAQLLSNTLYYKRFFPYY+
Sbjct: 8   ADKCALASSGFQGDIKALHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYA 67

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FNVLGGLD+EGKGCV+TYDAVGSYER GYS+QG+GS LIMP LDNQLKSPSPLLLPA+DA
Sbjct: 68  FNVLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGSALIMPVLDNQLKSPSPLLLPARDA 127

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           VTPLSE EAVDLVK  FASATERDIYTGDKLEIVV+NK G  REY++LRKD
Sbjct: 128 VTPLSETEAVDLVKDVFASATERDIYTGDKLEIVVINKAGTKREYIDLRKD 178


>gi|15232965|ref|NP_191641.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
 gi|334186160|ref|NP_001190146.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
 gi|297820934|ref|XP_002878350.1| hypothetical protein ARALYDRAFT_907612 [Arabidopsis lyrata subsp.
           lyrata]
 gi|12643281|sp|P42742.2|PSB1_ARATH RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S
           proteasome beta subunit F-1; AltName: Full=Proteasome
           component 5; AltName: Full=Proteasome subunit beta
           type-6; AltName: Full=TAS-F22/FAFP98; AltName:
           Full=TAS-G39.20
 gi|577531|emb|CAA56201.1| proteasome subunit [Arabidopsis thaliana]
 gi|3421120|gb|AAC32073.1| 20S proteasome beta subunit PBF1 [Arabidopsis thaliana]
 gi|7329692|emb|CAB82686.1| proteasome component C5 [Arabidopsis thaliana]
 gi|17065428|gb|AAL32868.1| proteasome component C5 [Arabidopsis thaliana]
 gi|20148485|gb|AAM10133.1| proteasome component C5 [Arabidopsis thaliana]
 gi|21554745|gb|AAM63678.1| proteasome component C5 [Arabidopsis thaliana]
 gi|297324188|gb|EFH54609.1| hypothetical protein ARALYDRAFT_907612 [Arabidopsis lyrata subsp.
           lyrata]
 gi|332646591|gb|AEE80112.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
 gi|332646593|gb|AEE80114.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
          Length = 223

 Score =  306 bits (785), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 144/171 (84%), Positives = 157/171 (91%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           AD+ V++SSGFQADVKALQK+L +RHLIYQHQHNKQMSCP MAQLLSNTLY+KRFFPYY+
Sbjct: 53  ADRAVLSSSGFQADVKALQKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYA 112

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FNVLGGLD EGKGCV+TYDAVGSYERVGY +QGSGSTLIMPFLDNQLKSPSPLLLP QD+
Sbjct: 113 FNVLGGLDEEGKGCVFTYDAVGSYERVGYGAQGSGSTLIMPFLDNQLKSPSPLLLPKQDS 172

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            TPLSEAEAVDLVKT FASATERDIYTGDKLEI++L   GI  E M+LRKD
Sbjct: 173 NTPLSEAEAVDLVKTVFASATERDIYTGDKLEIMILKADGIKTELMDLRKD 223


>gi|195611928|gb|ACG27794.1| proteasome subunit beta type 1 [Zea mays]
          Length = 221

 Score =  306 bits (784), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 143/171 (83%), Positives = 158/171 (92%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           ADKCV+ASSGFQ D+KALQK LAAR L+YQ QHNK+MSCP MAQLLSNTLYYKRFFPYY+
Sbjct: 51  ADKCVLASSGFQGDIKALQKNLAARELLYQXQHNKRMSCPAMAQLLSNTLYYKRFFPYYA 110

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FNVLGGLD+EGKGCV+TYDAVGSYER GYS+QG+GSTLIMP LDNQLKSPSPLLLP +DA
Sbjct: 111 FNVLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGSTLIMPVLDNQLKSPSPLLLPVRDA 170

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           VTPLSE+EA+DLVK  FASATERDIYTGDKLEIVV+NK G  REY++LRKD
Sbjct: 171 VTPLSESEAIDLVKGVFASATERDIYTGDKLEIVVINKAGTKREYIDLRKD 221


>gi|115480019|ref|NP_001063603.1| Os09g0505600 [Oryza sativa Japonica Group]
 gi|17380182|sp|O64464.1|PSB1_ORYSJ RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S
           proteasome alpha subunit F; AltName: Full=20S proteasome
           subunit beta-6
 gi|3138799|dbj|BAA28276.1| beta 6 subunit of 20S proteasome [Oryza sativa Japonica Group]
 gi|113631836|dbj|BAF25517.1| Os09g0505600 [Oryza sativa Japonica Group]
 gi|125606253|gb|EAZ45289.1| hypothetical protein OsJ_29931 [Oryza sativa Japonica Group]
 gi|215686333|dbj|BAG87594.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215736983|dbj|BAG95912.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 221

 Score =  306 bits (783), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 143/171 (83%), Positives = 156/171 (91%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           ADKC +ASSGFQ D+KAL K LAAR L+YQHQHNK+MSCP MAQLLSNTLYYKRFFPYY+
Sbjct: 51  ADKCALASSGFQGDIKALHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYA 110

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FNVLGGLD+EGKGCV+TYDAVGSYER GYS+QG+GS LIMP LDNQLKSPSPLLLPA+DA
Sbjct: 111 FNVLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGSALIMPVLDNQLKSPSPLLLPARDA 170

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           VTPLSE EAVDLVK  FASATERDIYTGDKLEIVV+NK G  REY++LRKD
Sbjct: 171 VTPLSETEAVDLVKDVFASATERDIYTGDKLEIVVINKAGTKREYIDLRKD 221


>gi|224033845|gb|ACN35998.1| unknown [Zea mays]
          Length = 221

 Score =  305 bits (781), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 143/171 (83%), Positives = 158/171 (92%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           ADKCV+ASSGFQ D+KAL K LAAR L+YQHQHNK+MSCP MAQLLSNTLYYKRFFPYY+
Sbjct: 51  ADKCVLASSGFQGDIKALHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYA 110

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FNVLGGLD+EGK CV+TYDAVGSYER GYS+QG+GSTLIMP LDNQLKSPSPLLLPA+DA
Sbjct: 111 FNVLGGLDSEGKECVFTYDAVGSYERTGYSAQGTGSTLIMPVLDNQLKSPSPLLLPARDA 170

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           VTPLSE+EA+DLVK  FASATERDIYTGDKLEIVV+NK G  REY++LRKD
Sbjct: 171 VTPLSESEAIDLVKDVFASATERDIYTGDKLEIVVINKVGTKREYIDLRKD 221


>gi|346467893|gb|AEO33791.1| hypothetical protein [Amblyomma maculatum]
          Length = 221

 Score =  305 bits (780), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 142/171 (83%), Positives = 157/171 (91%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           ADK ++ASSGFQ D+KALQK LAA+HLIYQHQHNKQMSCP M QLLSNTLYYKR  PYY+
Sbjct: 51  ADKSILASSGFQGDIKALQKNLAAKHLIYQHQHNKQMSCPAMGQLLSNTLYYKRXXPYYA 110

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FNVL GLDNEGKGCV+TYDAVGSYERVGYS+QGSGSTLIMP LDNQLKSPSPLLLPA+DA
Sbjct: 111 FNVLAGLDNEGKGCVFTYDAVGSYERVGYSAQGSGSTLIMPVLDNQLKSPSPLLLPAKDA 170

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           VTPLSE+EAVD+VK  FASATERDIYTGD+LEIVV++  GI RE++ELRKD
Sbjct: 171 VTPLSESEAVDMVKDVFASATERDIYTGDRLEIVVIDASGIRREFIELRKD 221


>gi|255640620|gb|ACU20595.1| unknown [Glycine max]
          Length = 207

 Score =  304 bits (779), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 144/152 (94%), Positives = 150/152 (98%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           A+KCVMASSGFQADVKALQK+L+ARHLIYQHQHNKQMSCP MAQLLSNTLYYKRFFPYY+
Sbjct: 53  AEKCVMASSGFQADVKALQKVLSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYA 112

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FNVLGGLDNEGKGCV+TYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA
Sbjct: 113 FNVLGGLDNEGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 172

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLE 164
           VTPLSEAEAVDLVKT FASATERDIYTGDKL+
Sbjct: 173 VTPLSEAEAVDLVKTVFASATERDIYTGDKLK 204


>gi|79315846|ref|NP_001030905.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
 gi|332646592|gb|AEE80113.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
          Length = 223

 Score =  301 bits (772), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 142/171 (83%), Positives = 156/171 (91%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           AD+ V++SSGFQADVKALQK+L +RHLIYQHQHNKQMSCP MAQLLSNTLY+KRFFPYY+
Sbjct: 53  ADRAVLSSSGFQADVKALQKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYA 112

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FNVLGGLD EGKGCV+TYDAVGSYERVGY +QGSGSTLIMPFLDNQLKSPSPLLLP QD+
Sbjct: 113 FNVLGGLDEEGKGCVFTYDAVGSYERVGYGAQGSGSTLIMPFLDNQLKSPSPLLLPKQDS 172

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            TPLSEAEAVDLVKT FASATERDIYT +KLEI++L   GI  E M+LRKD
Sbjct: 173 NTPLSEAEAVDLVKTVFASATERDIYTVNKLEIMILKADGIKTELMDLRKD 223


>gi|218201500|gb|EEC83927.1| hypothetical protein OsI_30000 [Oryza sativa Indica Group]
          Length = 219

 Score =  301 bits (772), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 138/171 (80%), Positives = 158/171 (92%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           ADKCV+ASSGFQ DVKALQ+ LAA+ L+Y+H HNK+MSCP MAQLLSNTLYYKRFFPYY+
Sbjct: 49  ADKCVLASSGFQGDVKALQRNLAAKELLYEHNHNKKMSCPAMAQLLSNTLYYKRFFPYYA 108

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FNVLGGLD+EGKGCV+TYDAVGSYER GYS+QG+G+ L+MP LDNQLKSPSPLLLPA+DA
Sbjct: 109 FNVLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGAALMMPVLDNQLKSPSPLLLPARDA 168

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           VTPLS+++AVDLVK  FASATERDIYTGDKLEIVV+N  G HRE++ELRKD
Sbjct: 169 VTPLSQSDAVDLVKDVFASATERDIYTGDKLEIVVINSAGSHREFIELRKD 219


>gi|414869634|tpg|DAA48191.1| TPA: proteasome subunit beta type [Zea mays]
          Length = 219

 Score =  301 bits (771), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 138/171 (80%), Positives = 157/171 (91%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           +DKCV+ASSGFQ D+KALQK LAA+ LIY+H +NK+MSCP MAQLLSNTLYYKRFFPYY+
Sbjct: 49  SDKCVLASSGFQGDIKALQKALAAKELIYEHNNNKKMSCPAMAQLLSNTLYYKRFFPYYA 108

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FNVL GLD +GKGCV+TYDAVGSYER GYS+QG+GS L+MP LDNQLKSPSPLLLPA+DA
Sbjct: 109 FNVLAGLDTQGKGCVFTYDAVGSYERTGYSAQGTGSALMMPVLDNQLKSPSPLLLPARDA 168

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           VTPLSE++AVDLVK  FASATERDIYTGD+LEIVV+NK G HREY+ELRKD
Sbjct: 169 VTPLSESDAVDLVKDVFASATERDIYTGDRLEIVVINKSGTHREYIELRKD 219


>gi|357148563|ref|XP_003574814.1| PREDICTED: proteasome subunit beta type-1-like [Brachypodium
           distachyon]
          Length = 219

 Score =  300 bits (769), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 138/171 (80%), Positives = 156/171 (91%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           ADKCV+ASSGFQ D+KALQK L A+ L+Y+H HNK+MSCP MAQLLSNTLYYKRFFPYY+
Sbjct: 49  ADKCVLASSGFQGDIKALQKNLTAKELVYEHNHNKKMSCPAMAQLLSNTLYYKRFFPYYA 108

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FNVLGGLD+EGKGCV+TYDAVGSYER GYS+QG+G+TL+MP LDNQLKSPSPLLLPA+DA
Sbjct: 109 FNVLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGATLMMPVLDNQLKSPSPLLLPARDA 168

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           VTPLSE+EAVDLVK  FASATERDIYTGD +EIVV+N  G HRE +ELRKD
Sbjct: 169 VTPLSESEAVDLVKDVFASATERDIYTGDSVEIVVINSSGTHRECIELRKD 219


>gi|115477445|ref|NP_001062318.1| Os08g0529100 [Oryza sativa Japonica Group]
 gi|42407968|dbj|BAD09106.1| putative proteasome subunit beta type 1 [Oryza sativa Japonica
           Group]
 gi|113624287|dbj|BAF24232.1| Os08g0529100 [Oryza sativa Japonica Group]
 gi|215678609|dbj|BAG92264.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222640910|gb|EEE69042.1| hypothetical protein OsJ_28037 [Oryza sativa Japonica Group]
          Length = 219

 Score =  300 bits (767), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 137/171 (80%), Positives = 157/171 (91%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           ADKCV+ASSGFQ DVKALQ+ L A+ L+Y+H HNK+MSCP MAQLLSNTLYYKRFFPYY+
Sbjct: 49  ADKCVLASSGFQGDVKALQRNLTAKELLYEHNHNKKMSCPAMAQLLSNTLYYKRFFPYYA 108

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FNVLGGLD+EGKGCV+TYDAVGSYER GYS+QG+G+ L+MP LDNQLKSPSPLLLPA+DA
Sbjct: 109 FNVLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGAALMMPVLDNQLKSPSPLLLPARDA 168

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           VTPLS+++AVDLVK  FASATERDIYTGDKLEIVV+N  G HRE++ELRKD
Sbjct: 169 VTPLSQSDAVDLVKDVFASATERDIYTGDKLEIVVINSAGSHREFIELRKD 219


>gi|414886156|tpg|DAA62170.1| TPA: hypothetical protein ZEAMMB73_205941 [Zea mays]
          Length = 213

 Score =  300 bits (767), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 138/169 (81%), Positives = 154/169 (91%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           +   +SSGFQ D+KAL K LAAR L+YQHQHNK+MSCP MAQLLSNTLYYKRFFPYY+FN
Sbjct: 45  RSATSSSGFQGDIKALHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFN 104

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 134
           VLGGLD+EGKGCV+TYDAVGSYER GYS+QG+GSTLIMP LDNQLKSPSPLLLPA+DAVT
Sbjct: 105 VLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGSTLIMPVLDNQLKSPSPLLLPARDAVT 164

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           PLSE+EA+DLVK  FASATERDIYTGDKLEIVV+NK G  REY++LRKD
Sbjct: 165 PLSESEAIDLVKDVFASATERDIYTGDKLEIVVINKVGTKREYIDLRKD 213


>gi|242082111|ref|XP_002445824.1| hypothetical protein SORBIDRAFT_07g026360 [Sorghum bicolor]
 gi|241942174|gb|EES15319.1| hypothetical protein SORBIDRAFT_07g026360 [Sorghum bicolor]
          Length = 219

 Score =  295 bits (755), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 136/171 (79%), Positives = 154/171 (90%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           ADKCV+ASSGFQ D+KALQK L A+ LIY+H +NK+MSCP MAQLLSNTLYYKRFFPYY+
Sbjct: 49  ADKCVLASSGFQGDIKALQKALTAKELIYEHNNNKKMSCPAMAQLLSNTLYYKRFFPYYA 108

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FNVL GLD +GKGCV+TYDAVGSYER GYS+QG+GS L+MP LDNQLKSPSPLLLPA+DA
Sbjct: 109 FNVLAGLDTQGKGCVFTYDAVGSYERTGYSAQGTGSALMMPVLDNQLKSPSPLLLPARDA 168

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           VTPLSE++AVDLVK  FASATERDIYTGD+LEIVV+N  G HRE +ELRKD
Sbjct: 169 VTPLSESDAVDLVKDVFASATERDIYTGDRLEIVVINSSGTHRECIELRKD 219


>gi|226533094|ref|NP_001147213.1| proteasome subunit beta type 1 [Zea mays]
 gi|195608582|gb|ACG26121.1| proteasome subunit beta type 1 [Zea mays]
          Length = 219

 Score =  294 bits (753), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 136/171 (79%), Positives = 155/171 (90%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           +DKCV+ASSGFQ D+KALQK LAA+ LIY+H +NK+MSCP MAQLLSNTLYYKRFFPYY+
Sbjct: 49  SDKCVLASSGFQGDIKALQKALAAKELIYEHNNNKKMSCPAMAQLLSNTLYYKRFFPYYA 108

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FNVL GLD +GKGCV+TYDAVGSYER GYS+QG+GS L+MP LDNQLKSPSPLLLPA+DA
Sbjct: 109 FNVLAGLDTQGKGCVFTYDAVGSYERTGYSAQGTGSALMMPVLDNQLKSPSPLLLPARDA 168

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           VTPLSE++AVDLVK  FASATERDIYTGD+LEIVV+N  G HRE +ELRKD
Sbjct: 169 VTPLSESDAVDLVKDVFASATERDIYTGDRLEIVVINSFGTHRECIELRKD 219


>gi|168046657|ref|XP_001775789.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672796|gb|EDQ59328.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 229

 Score =  290 bits (743), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 135/170 (79%), Positives = 151/170 (88%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           +KCV+ASSGFQADV++LQK L ARH IYQHQHNKQMSCP MAQLLSNTLYYKRFFPYY+F
Sbjct: 60  EKCVLASSGFQADVRSLQKNLDARHQIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAF 119

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           NVLGGLDNEGKGCVYTYDAVGSYER GYSSQGSG TLIMP LDNQLKS SPL+LP +++ 
Sbjct: 120 NVLGGLDNEGKGCVYTYDAVGSYERSGYSSQGSGQTLIMPVLDNQLKSASPLVLPPRESS 179

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           TPL+E EAVDL+K  FASA ERDIYTGD +EIV++NK GI RE M L++D
Sbjct: 180 TPLTENEAVDLIKDTFASAAERDIYTGDGVEIVIINKDGIRRETMPLKRD 229


>gi|168019760|ref|XP_001762412.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686490|gb|EDQ72879.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 237

 Score =  290 bits (743), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 135/170 (79%), Positives = 152/170 (89%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           +KCV+ASSGFQADV++LQK L ARH IYQHQH+KQMSCP MAQLLSNTLYYKRFFPYYSF
Sbjct: 68  EKCVLASSGFQADVRSLQKNLDARHQIYQHQHSKQMSCPAMAQLLSNTLYYKRFFPYYSF 127

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           NVLGGLDNEGKGCVYTYDAVGSYER GYSSQGSG TLIMP LDNQLKS SPL+LP +++ 
Sbjct: 128 NVLGGLDNEGKGCVYTYDAVGSYERSGYSSQGSGQTLIMPVLDNQLKSASPLVLPPRESS 187

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           TPL+E+EAVDL+K  FASA ERDIYTGD +EIV++NK GI RE M L++D
Sbjct: 188 TPLTESEAVDLIKDTFASAAERDIYTGDGVEIVIINKEGIRRETMALKRD 237


>gi|14594933|emb|CAC43327.1| putative beta6 proteasome subunit [Nicotiana tabacum]
          Length = 192

 Score =  289 bits (739), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 137/148 (92%), Positives = 143/148 (96%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           ADKCV+ASSGFQADVKALQK+LAARHLIYQHQHNKQMSCP M QLLSNTLYYKRFFPYYS
Sbjct: 45  ADKCVLASSGFQADVKALQKVLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYS 104

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FNVLGGLDNEGKGCV+TYDAVGSY RVGYSSQGSGSTLIMPFLD QLKSPSPLLLPA+DA
Sbjct: 105 FNVLGGLDNEGKGCVFTYDAVGSYGRVGYSSQGSGSTLIMPFLDYQLKSPSPLLLPAKDA 164

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTG 160
           VTPLSE+EA+DLVKTCF SATERDIYTG
Sbjct: 165 VTPLSESEAIDLVKTCFVSATERDIYTG 192


>gi|302810458|ref|XP_002986920.1| hypothetical protein SELMODRAFT_124882 [Selaginella moellendorffii]
 gi|300145325|gb|EFJ12002.1| hypothetical protein SELMODRAFT_124882 [Selaginella moellendorffii]
          Length = 226

 Score =  275 bits (702), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 130/171 (76%), Positives = 145/171 (84%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           +D  VMASSGFQADV+ LQK L AR   Y HQH K MSCPGMAQLLSNTLYYKRFFPYYS
Sbjct: 56  SDTAVMASSGFQADVRTLQKNLEARQKGYYHQHGKPMSCPGMAQLLSNTLYYKRFFPYYS 115

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FNVLGGLD EGKGCVYTYDAVGSYER GYS+QGSG+ LIMP LDNQLKS SPLL P ++ 
Sbjct: 116 FNVLGGLDTEGKGCVYTYDAVGSYERTGYSTQGSGAELIMPILDNQLKSASPLLYPPRET 175

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            TPL+E EA+++VK  FASATER IYTGD LEIVV+NK GIH+EY++L+KD
Sbjct: 176 ATPLTEQEALEIVKDTFASATERQIYTGDGLEIVVINKDGIHKEYLDLKKD 226


>gi|302814429|ref|XP_002988898.1| hypothetical protein SELMODRAFT_235631 [Selaginella moellendorffii]
 gi|300143235|gb|EFJ09927.1| hypothetical protein SELMODRAFT_235631 [Selaginella moellendorffii]
          Length = 226

 Score =  275 bits (702), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 130/171 (76%), Positives = 145/171 (84%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           +D  VMASSGFQADV+ LQK L AR   Y HQH K MSCPGMAQLLSNTLYYKRFFPYYS
Sbjct: 56  SDTAVMASSGFQADVRTLQKNLEARQKGYYHQHGKPMSCPGMAQLLSNTLYYKRFFPYYS 115

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FNVLGGLD EGKGCVYTYDAVGSYER GYS+QGSG+ LIMP LDNQLKS SPLL P ++ 
Sbjct: 116 FNVLGGLDTEGKGCVYTYDAVGSYERTGYSTQGSGAELIMPILDNQLKSASPLLYPPRET 175

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            TPL+E EA+++VK  FASATER IYTGD LEIVV+NK GIH+EY++L+KD
Sbjct: 176 ATPLTEQEALEIVKDTFASATERQIYTGDGLEIVVINKDGIHKEYLDLKKD 226


>gi|302774737|ref|XP_002970785.1| hypothetical protein SELMODRAFT_94273 [Selaginella moellendorffii]
 gi|302818938|ref|XP_002991141.1| hypothetical protein SELMODRAFT_132999 [Selaginella moellendorffii]
 gi|300141072|gb|EFJ07787.1| hypothetical protein SELMODRAFT_132999 [Selaginella moellendorffii]
 gi|300161496|gb|EFJ28111.1| hypothetical protein SELMODRAFT_94273 [Selaginella moellendorffii]
          Length = 226

 Score =  272 bits (696), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 129/171 (75%), Positives = 144/171 (84%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           +D  VMASSGFQADV+ LQK L AR   Y HQH K MSCP MAQLLSNTLYYKRFFPYYS
Sbjct: 56  SDTAVMASSGFQADVRTLQKNLEARQKGYYHQHGKPMSCPAMAQLLSNTLYYKRFFPYYS 115

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FNVLGGLD EGKGCVYTYDAVGSYER GYS+QGSG+ LIMP LDNQLKS SPLL P ++ 
Sbjct: 116 FNVLGGLDTEGKGCVYTYDAVGSYERTGYSTQGSGAELIMPILDNQLKSASPLLYPPRET 175

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            TPL+E EA+++VK  FASATER IYTGD LEIVV+NK GIH+EY++L+KD
Sbjct: 176 ATPLTEQEALEIVKDTFASATERQIYTGDGLEIVVINKDGIHKEYLDLKKD 226


>gi|414886159|tpg|DAA62173.1| TPA: hypothetical protein ZEAMMB73_205941 [Zea mays]
          Length = 234

 Score =  269 bits (688), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 126/147 (85%), Positives = 138/147 (93%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           ADKCV+ASSGFQ D+KAL K LAAR L+YQHQHNK+MSCP MAQLLSNTLYYKRFFPYY+
Sbjct: 51  ADKCVLASSGFQGDIKALHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYA 110

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FNVLGGLD+EGKGCV+TYDAVGSYER GYS+QG+GSTLIMP LDNQLKSPSPLLLPA+DA
Sbjct: 111 FNVLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGSTLIMPVLDNQLKSPSPLLLPARDA 170

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYT 159
           VTPLSE+EA+DLVK  FASATERDIYT
Sbjct: 171 VTPLSESEAIDLVKDVFASATERDIYT 197


>gi|414886157|tpg|DAA62171.1| TPA: hypothetical protein ZEAMMB73_205941 [Zea mays]
          Length = 228

 Score =  251 bits (642), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 121/147 (82%), Positives = 132/147 (89%), Gaps = 6/147 (4%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           ADKCV+ASSGFQ D+KAL K LAAR L+YQHQHNK+MSCP MAQLLSNTLYYKRFFPYY+
Sbjct: 51  ADKCVLASSGFQGDIKALHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYA 110

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FNVLG      KGCV+TYDAVGSYER GYS+QG+GSTLIMP LDNQLKSPSPLLLPA+DA
Sbjct: 111 FNVLG------KGCVFTYDAVGSYERTGYSAQGTGSTLIMPVLDNQLKSPSPLLLPARDA 164

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYT 159
           VTPLSE+EA+DLVK  FASATERDIYT
Sbjct: 165 VTPLSESEAIDLVKDVFASATERDIYT 191


>gi|414886162|tpg|DAA62176.1| TPA: hypothetical protein ZEAMMB73_205941 [Zea mays]
          Length = 135

 Score =  248 bits (634), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 116/135 (85%), Positives = 127/135 (94%)

Query: 49  MSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGS 108
           MSCP MAQLLSNTLYYKRFFPYY+FNVLGGLD+EGKGCV+TYDAVGSYER GYS+QG+GS
Sbjct: 1   MSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGS 60

Query: 109 TLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVL 168
           TLIMP LDNQLKSPSPLLLPA+DAVTPLSE+EA+DLVK  FASATERDIYTGDKLEIVV+
Sbjct: 61  TLIMPVLDNQLKSPSPLLLPARDAVTPLSESEAIDLVKDVFASATERDIYTGDKLEIVVI 120

Query: 169 NKGGIHREYMELRKD 183
           NK G  REY++LRKD
Sbjct: 121 NKVGTKREYIDLRKD 135


>gi|303278464|ref|XP_003058525.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226459685|gb|EEH56980.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 220

 Score =  245 bits (625), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 112/170 (65%), Positives = 137/170 (80%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           +KCVMAS+GF AD   L+K L AR + Y+ Q+NK+M C   AQ+LSNTLYY+RFFPYY+F
Sbjct: 51  EKCVMASAGFMADAVTLKKTLKARCVSYEFQNNKEMGCVSFAQMLSNTLYYRRFFPYYTF 110

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++ GLD EGKG V+TYDAVGSYER  YS QGSG  LIMP LDNQLK+ SPL+LPAQ + 
Sbjct: 111 NIVAGLDKEGKGAVFTYDAVGSYERTNYSCQGSGQGLIMPVLDNQLKTVSPLVLPAQSSA 170

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           TPLSE+EAVDLVK CFA+A ERDIYTGD +EI ++NK G+ +EY +L+ D
Sbjct: 171 TPLSESEAVDLVKDCFATAGERDIYTGDSVEIWIINKDGLRKEYQDLKLD 220


>gi|255076203|ref|XP_002501776.1| predicted protein [Micromonas sp. RCC299]
 gi|226517040|gb|ACO63034.1| predicted protein [Micromonas sp. RCC299]
          Length = 229

 Score =  243 bits (619), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 112/171 (65%), Positives = 136/171 (79%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           +DKCV+AS+GF AD   L+K L AR   Y+ Q++K M C   AQ+LSNTLYY+RFFPYY+
Sbjct: 59  SDKCVLASAGFMADAVTLKKTLKARCTTYEFQNDKPMGCVSFAQMLSNTLYYRRFFPYYT 118

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FN++ GLD EGKG V+TYDAVGSYER  YS QGSG  LIMP LDNQLK+ SPL+LPAQ +
Sbjct: 119 FNIVAGLDAEGKGAVFTYDAVGSYERTNYSCQGSGQGLIMPVLDNQLKTVSPLVLPAQSS 178

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            TPLSE+EAVDLVK CFA+A ERDIYTGD +EI ++NK G+ +EY EL+ D
Sbjct: 179 ATPLSESEAVDLVKDCFATAGERDIYTGDTVEIWIINKDGVRKEYQELKLD 229


>gi|308807300|ref|XP_003080961.1| PSB1_PETHY Proteasome subunit beta type 1 (ISS) [Ostreococcus
           tauri]
 gi|116059422|emb|CAL55129.1| PSB1_PETHY Proteasome subunit beta type 1 (ISS) [Ostreococcus
           tauri]
          Length = 233

 Score =  228 bits (580), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 103/169 (60%), Positives = 129/169 (76%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           K +MAS+GF AD   L+K L AR   Y+ Q+ +++ C   AQ+LSNTLYY+RFFPYY+FN
Sbjct: 65  KTLMASAGFAADAVTLKKTLKARCKQYEFQNKREIGCVAFAQMLSNTLYYRRFFPYYAFN 124

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 134
           ++ GLD EGKG V+TYDAVGSYER  YS QGSG  LIMP LDNQLK+ SPL+LPA  + T
Sbjct: 125 IVAGLDAEGKGAVFTYDAVGSYERTNYSCQGSGQALIMPVLDNQLKTVSPLVLPAASSAT 184

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           PLSE EA+DL+K CFA+A ERDIYTGD +E+ ++N  G+ +E M LR D
Sbjct: 185 PLSEQEAIDLIKDCFATAAERDIYTGDSVELWIMNAEGVRKEEMALRAD 233


>gi|412993855|emb|CCO14366.1| predicted protein [Bathycoccus prasinos]
          Length = 243

 Score =  225 bits (574), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 106/169 (62%), Positives = 128/169 (75%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           K +MAS+GF AD   L+KLL  R   YQ  +NK + C   AQ+LSNTLY +RFFPYY+FN
Sbjct: 75  KTLMASAGFMADAATLKKLLKGRCDQYQFANNKPIGCVAFAQMLSNTLYMRRFFPYYAFN 134

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 134
           ++ GLD EGKG V+TYDAVGSYER  YS QGSG  LIMP LDNQLK+ SPL+LPA  + T
Sbjct: 135 IVAGLDAEGKGAVFTYDAVGSYERTNYSCQGSGQQLIMPVLDNQLKTVSPLVLPAVSSAT 194

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           PLSE EA+DL+K CFA+A ERDIYTGD +E+ V+NK GI +E M L+ D
Sbjct: 195 PLSEEEAIDLIKDCFATAGERDIYTGDAVELFVMNKDGIRKETMPLKTD 243


>gi|145350076|ref|XP_001419449.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579680|gb|ABO97742.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 227

 Score =  225 bits (574), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 103/169 (60%), Positives = 130/169 (76%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           K +MAS+GF AD + L+K L AR   Y+ Q+ K + C   AQ+LSNTLYY+RFFPYY+FN
Sbjct: 59  KTLMASAGFMADAQTLKKTLKARCKQYEFQNKKPIGCVSFAQMLSNTLYYRRFFPYYAFN 118

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 134
           ++ GLD EGKG V+TYDAVGSYER  YS QGSG  LIMP LDNQLK+ SPL+LPA  + T
Sbjct: 119 IVAGLDAEGKGAVFTYDAVGSYERTNYSCQGSGQALIMPVLDNQLKTVSPLVLPAVSSAT 178

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           PLSEA A++L+K CFA+A ERDIYTGD++E+ ++N  G+ +E M LR D
Sbjct: 179 PLSEAAAIELIKDCFATAAERDIYTGDRVELWIMNADGVRKEEMPLRLD 227


>gi|307107838|gb|EFN56080.1| hypothetical protein CHLNCDRAFT_22624 [Chlorella variabilis]
          Length = 239

 Score =  224 bits (572), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 107/189 (56%), Positives = 137/189 (72%), Gaps = 6/189 (3%)

Query: 1   MGSFFYILTSCRAD------KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGM 54
           M + + ILT  ++       KCV+AS+G QAD + L K+L +RH+ YQ  H K M+CP M
Sbjct: 51  MSTGYSILTRNKSKILQLNPKCVIASAGMQADQETLHKVLHSRHVTYQFNHRKPMACPAM 110

Query: 55  AQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 114
           AQLLSNTLYYKRFFPYY+FN+  GLD+EG+G VYTYDA+GSYERVGY  QG+G  L+ P 
Sbjct: 111 AQLLSNTLYYKRFFPYYTFNLCAGLDDEGRGAVYTYDAIGSYERVGYGCQGNGKELVQPV 170

Query: 115 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIH 174
           LDNQLK+ SPL LP Q  ++ L   +AVDLVK  F SA ERDIYTGD +EI+++ K  I 
Sbjct: 171 LDNQLKAASPLALPPQQWLSSLPLEQAVDLVKGAFVSAGERDIYTGDDVEILIITKDCIK 230

Query: 175 REYMELRKD 183
            + +EL++D
Sbjct: 231 TDRLELKRD 239


>gi|384253987|gb|EIE27461.1| N-terminal nucleophile aminohydrolase [Coccomyxa subellipsoidea
           C-169]
          Length = 249

 Score =  208 bits (530), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 98/171 (57%), Positives = 124/171 (72%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           +DK ++ S GFQAD K L K+L  R++ YQ  H + MS    AQLL NTLYYKRFFPYY+
Sbjct: 79  SDKLMILSPGFQADAKTLHKVLQQRYIRYQFDHGRPMSVAACAQLLGNTLYYKRFFPYYT 138

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FN+  GLD EGKG VY+YDA+GS+ER GY+ QGSG  LI P LDNQLK+ SPL+LP ++ 
Sbjct: 139 FNICAGLDEEGKGAVYSYDAIGSHERSGYAVQGSGKDLIQPVLDNQLKAASPLVLPPENW 198

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           ++ L   +AVDLV+  F SA ERDIYTGD +EI ++   G  RE +EL+KD
Sbjct: 199 MSSLPLDQAVDLVRDAFVSAGERDIYTGDAVEIYIMTMEGTKREVLELKKD 249


>gi|222431909|gb|ACM50881.1| 20S proteasome beta subunit F1 [Ulva fasciata]
          Length = 241

 Score =  203 bits (516), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 89/168 (52%), Positives = 121/168 (72%)

Query: 16  CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNV 75
           CV+ASSGF+ D   L K L +R ++YQH H + + C  MAQ LSN LY KRFFP+Y+FN+
Sbjct: 74  CVLASSGFEGDRATLTKRLKSRAVMYQHSHKRPIGCEAMAQALSNELYGKRFFPFYTFNI 133

Query: 76  LGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP 135
           L GLD +G G VY+YDAVGSYER GY++QG+G+ L+ P LDNQL++ SPL+LP + +VT 
Sbjct: 134 LAGLDADGTGAVYSYDAVGSYERTGYAAQGTGNDLVQPLLDNQLRAASPLVLPKKPSVTA 193

Query: 136 LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           L    A+D+V+    +A ERDIYTGD +E+ ++ K GI +E   L+ D
Sbjct: 194 LPVERALDIVRDALTAAGERDIYTGDSIEVWIMTKDGIRKESTPLKTD 241


>gi|302841986|ref|XP_002952537.1| hypothetical protein VOLCADRAFT_62543 [Volvox carteri f.
           nagariensis]
 gi|300262176|gb|EFJ46384.1| hypothetical protein VOLCADRAFT_62543 [Volvox carteri f.
           nagariensis]
          Length = 212

 Score =  191 bits (484), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 93/170 (54%), Positives = 114/170 (67%), Gaps = 8/170 (4%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+AS+G QAD KAL KLL  R++ YQH H + M     AQLLSNTLYY RFFP Y+F
Sbjct: 51  DKVVVASAGMQADRKALHKLLQHRNVTYQHNHGRAMGVSAAAQLLSNTLYYNRFFPLYTF 110

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++ GLD +G+G VY YDA+GSYER GY  QGSG  LI P L+  L+ P        D  
Sbjct: 111 NLVAGLDEQGRGAVYNYDAIGSYERSGYFCQGSGKELIQPVLEGILRRP--------DVH 162

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            P     A+DLVK  F SA ERDIYTGDK+EI+++ K GI RE ++L+ D
Sbjct: 163 VPFRTCMALDLVKDAFVSAGERDIYTGDKVEILIITKDGIKREELQLKLD 212


>gi|290986448|ref|XP_002675936.1| predicted protein [Naegleria gruberi]
 gi|284089535|gb|EFC43192.1| predicted protein [Naegleria gruberi]
          Length = 223

 Score =  189 bits (479), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 90/174 (51%), Positives = 122/174 (70%), Gaps = 5/174 (2%)

Query: 11  CR-ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFP 69
           C+  DKCV+AS+G Q+D   L K+L  R + Y+HQH K MS   + Q+LSN LY +RFFP
Sbjct: 54  CKLTDKCVIASAGMQSDAATLHKVLKMRLVEYEHQHGKPMSVVAVGQMLSNMLYNRRFFP 113

Query: 70  YYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA 129
           YY+FN++ GLD +GKG V++YDA+GSY+ V   SQGSG TLI P LDNQ+   + LL+P 
Sbjct: 114 YYTFNLVAGLDTDGKGIVFSYDAIGSYQSVEVGSQGSGQTLIQPLLDNQVAFKNHLLVPN 173

Query: 130 QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            D    L+  +++ +VK  F SA ERDIYTGD +EI+++ K GI  E +EL+KD
Sbjct: 174 TD----LTLEQSLSIVKDAFTSAGERDIYTGDSVEILIITKEGIKTEILELKKD 223


>gi|111226971|ref|XP_001134620.1| proteasome subunit beta type 1 [Dictyostelium discoideum AX4]
 gi|74926737|sp|Q86A21.1|PSB1_DICDI RecName: Full=Proteasome subunit beta type-1
 gi|90971293|gb|EAS66954.1| proteasome subunit beta type 1 [Dictyostelium discoideum AX4]
          Length = 236

 Score =  183 bits (465), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 89/169 (52%), Positives = 118/169 (69%), Gaps = 3/169 (1%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           KCV+A+SG QAD  ALQK L +    ++ +H K MS P +AQ LSNTLYYKRFFPYY+FN
Sbjct: 71  KCVLATSGMQADTIALQKRLKSMLESFEKEHGKPMSTPAIAQFLSNTLYYKRFFPYYTFN 130

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 134
           ++ G+D +G+G ++TYDAVGS+ERV YSSQGSG+ L++P LDNQ+   +  ++     V 
Sbjct: 131 LVAGVDEQGEGWIWTYDAVGSHERVKYSSQGSGNQLVIPLLDNQVAKFNQQIVEGNKDV- 189

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             S  + V  VK    SA ERDIYTGD  +IVV++K G+H E  EL+ D
Sbjct: 190 --SCEQVVSFVKDSITSAGERDIYTGDFADIVVVDKNGVHWEKFELKLD 236


>gi|440796014|gb|ELR17123.1| proteasome subunit protein, putative [Acanthamoeba castellanii str.
           Neff]
          Length = 236

 Score =  182 bits (463), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 89/171 (52%), Positives = 115/171 (67%), Gaps = 3/171 (1%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            DKCV+A++G QAD  AL KLL  R   Y+HQH K MS P +AQ+L+  LY KRFFP+Y+
Sbjct: 69  TDKCVIATAGMQADQLALHKLLQTRLQWYEHQHRKPMSTPAIAQMLATILYSKRFFPFYT 128

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FNVLGG+D+ G GCVY+YDAVGS+ERV YSS G+G+ L+ P LDNQ+         A   
Sbjct: 129 FNVLGGVDDNGVGCVYSYDAVGSFERVKYSSSGTGNQLVQPLLDNQIGWKDQR---ATKT 185

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              L+  E VD V+  F SA ERDIYTGD + I V++K G+     +L++D
Sbjct: 186 KPELNVEETVDFVRDIFTSAGERDIYTGDYVLIAVIDKDGVKEMKFDLKQD 236


>gi|330791448|ref|XP_003283805.1| hypothetical protein DICPUDRAFT_45058 [Dictyostelium purpureum]
 gi|325086304|gb|EGC39696.1| hypothetical protein DICPUDRAFT_45058 [Dictyostelium purpureum]
          Length = 236

 Score =  182 bits (462), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 90/171 (52%), Positives = 117/171 (68%), Gaps = 3/171 (1%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            +KCV+A+SG QAD  ALQK L      YQ +H K MS P +AQ LSNTLYYKRFFPYY+
Sbjct: 69  TNKCVLATSGMQADTIALQKRLKLMLETYQKEHGKPMSTPAIAQFLSNTLYYKRFFPYYT 128

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FN++ G+D +G+G ++TYDAVGS+ERV YSSQGSG+ L++P LDNQ+   +  ++     
Sbjct: 129 FNLVAGVDEKGEGWIWTYDAVGSHERVKYSSQGSGNQLVIPLLDNQVAKRNQQIIQGNGD 188

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           V   S  + V  VK    SA ERDIYTGD  +IVV++K G+  E  EL+ D
Sbjct: 189 V---SCDQVVSFVKDAITSAGERDIYTGDFADIVVVDKDGVRWEKFELKLD 236


>gi|328868192|gb|EGG16572.1| proteasome subunit beta type 1 [Dictyostelium fasciculatum]
          Length = 236

 Score =  182 bits (462), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 89/171 (52%), Positives = 119/171 (69%), Gaps = 3/171 (1%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            DKCV+A+SG QAD  AL+K L  +   Y+  H K MS P +AQ LSNTLY+KRFFP+Y+
Sbjct: 69  TDKCVIATSGMQADTIALRKRLDTQLRQYERDHGKSMSTPAIAQFLSNTLYHKRFFPFYT 128

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FN++ G+D +G GCV+TYDAVGS+ERV +SSQGSG+ LI P LDNQ+   +  ++   D 
Sbjct: 129 FNLVAGVDEDGIGCVWTYDAVGSHERVRFSSQGSGNQLIQPLLDNQVGKFNQQIV---DG 185

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              LS  +A+ LVK    SA ERDIYTGD  +IV +++ G+H E  +L+ D
Sbjct: 186 PRELSAEQALSLVKDAITSAGERDIYTGDFADIVTIDQKGVHFEKFDLKLD 236


>gi|320163476|gb|EFW40375.1| proteasome subunit beta type-1 [Capsaspora owczarzaki ATCC 30864]
          Length = 238

 Score =  181 bits (458), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 90/171 (52%), Positives = 114/171 (66%), Gaps = 3/171 (1%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           +DK V+AS GF  DV  L K +  R   Y+HQH K M+   +AQ+LSNTLYY+RFFP+Y+
Sbjct: 71  SDKTVLASCGFHGDVLTLTKNIFTRLRKYEHQHEKTMATHAIAQMLSNTLYYRRFFPFYT 130

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           +NV+GGLD  GKG VY+YD VGSYER  Y + G+ S L+ P LDNQL   +   L     
Sbjct: 131 YNVIGGLDESGKGAVYSYDPVGSYERESYRAAGTASALLQPLLDNQLGYKN---LAPNVP 187

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PL+ A AV +VK  FA+ATERDIYTGD ++I V+   G+  E  ELRKD
Sbjct: 188 RPPLTVARAVAIVKDVFAAATERDIYTGDSVDIQVITSEGVATERYELRKD 238


>gi|281210614|gb|EFA84780.1| proteasome subunit beta type 1 [Polysphondylium pallidum PN500]
          Length = 235

 Score =  177 bits (450), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 89/171 (52%), Positives = 115/171 (67%), Gaps = 3/171 (1%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            +KCV+A+SG QAD  AL+K L      YQ +H K MS P ++Q LSNTLY KRFFPYY+
Sbjct: 68  TNKCVIATSGMQADTLALRKRLETVLSRYQKEHGKPMSTPAISQYLSNTLYQKRFFPYYT 127

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FN++ G+D +G GC++TYDAVGS+ERV  SSQGSG+ L+ P LDNQ+   +  ++   D 
Sbjct: 128 FNLVCGVDEDGVGCIWTYDAVGSHERVKMSSQGSGNQLVQPLLDNQVGKFNQRIV---DG 184

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              LS  +AV L K    SA ERDIYTGD  +IVV+N  G+H E   L+ D
Sbjct: 185 PRELSSEQAVSLAKDAITSAGERDIYTGDFADIVVINSTGVHWEKFNLKLD 235


>gi|298711428|emb|CBJ32569.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 251

 Score =  175 bits (444), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 85/169 (50%), Positives = 113/169 (66%), Gaps = 5/169 (2%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           KCV+AS+G + DV  L K L     +Y H   K+M+ P +AQ+L+NTLYY+RFFPYYSFN
Sbjct: 88  KCVIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFN 147

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 134
           VL GLD +GKG V++YDA+GS+ERV YS+ GSG T I+P LDN ++         +D   
Sbjct: 148 VLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVE-----FKTRKDEKP 202

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             S AE V+LVK    +A ERDIYTGD +EI +++K G   +   L+KD
Sbjct: 203 ARSAAETVELVKELLVTAGERDIYTGDAVEITIISKDGTSTQMFPLKKD 251


>gi|397610458|gb|EJK60845.1| hypothetical protein THAOC_18741 [Thalassiosira oceanica]
          Length = 283

 Score =  175 bits (443), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 80/169 (47%), Positives = 115/169 (68%), Gaps = 5/169 (2%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           +CV+ S+G + DV  L+ +L  +  +Y H H K M+ P +AQ+L NTLYYKRFFPYYSFN
Sbjct: 120 RCVLGSAGCKTDVDQLRSVLDIKMKVYAHNHRKPMATPSVAQMLGNTLYYKRFFPYYSFN 179

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 134
           VL G+D+EGKG VY+YDA+GS+ER  +S+ GSG + ++P +DN +   + L     D   
Sbjct: 180 VLAGIDSEGKGAVYSYDAIGSFERTPFSASGSGQSFLIPLMDNVISHKNRL-----DERR 234

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            L   E V++VK  F +A ERDIYTGD ++I+V+ K GI ++  +L+ D
Sbjct: 235 DLPAEEVVEIVKDAFLTAGERDIYTGDAVDIMVITKDGIDKQTFQLKAD 283


>gi|223993685|ref|XP_002286526.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220977841|gb|EED96167.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 280

 Score =  174 bits (440), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 81/170 (47%), Positives = 112/170 (65%), Gaps = 5/170 (2%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           +KCV+ S+G + DV  L+ +L  +  +Y H H K M+ P +AQ+L NTLY KRFFPYYSF
Sbjct: 116 EKCVLGSAGCKTDVDQLRSVLDIKMKVYAHNHRKAMATPSVAQMLGNTLYMKRFFPYYSF 175

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           NVL G+D+EGKG VY+YDA+GS+ER  +S+ GSG   ++P +DN +   + L     D  
Sbjct: 176 NVLAGIDSEGKGAVYSYDAIGSFERTPFSASGSGQAFLIPLMDNVISHKNRL-----DQK 230

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             L   E V++VK  F +A ERDIYTGD +EI+V+   GI  E  +L+ D
Sbjct: 231 RELGSEEVVEIVKDAFLTAGERDIYTGDAVEIMVITAKGIESETFKLKAD 280


>gi|349805257|gb|AEQ18101.1| putative proteasome beta 1 subunit [Hymenochirus curtipes]
          Length = 205

 Score =  171 bits (434), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 83/170 (48%), Positives = 114/170 (67%), Gaps = 4/170 (2%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF AD   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 40  DKTVIGCSGFHADCLTLTKIIEARLKMYKHSNNKTMTSGAIAAMLSTILYSRRFFPYYVY 99

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  Y + GS S ++ P LDNQ+   +   +P  + V
Sbjct: 100 NIIGGLDEEGKGAVYSFDPVGSYQRDAYKAGGSASAMLQPLLDNQIGYKN---MPNAEQV 156

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            PL+  +A+ LVK  F SATERD+YTGD L+I ++ K GI  E + LRKD
Sbjct: 157 -PLTLEKAIKLVKDVFISATERDVYTGDSLKISIVTKEGIREESLSLRKD 205


>gi|156365620|ref|XP_001626742.1| predicted protein [Nematostella vectensis]
 gi|156213630|gb|EDO34642.1| predicted protein [Nematostella vectensis]
          Length = 229

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 84/167 (50%), Positives = 111/167 (66%), Gaps = 4/167 (2%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V+  SGF  D   L K ++AR  +Y+H H K MSC  +AQ+LS  LYY+RFFPYY++N+L
Sbjct: 67  VLGCSGFHGDCLTLTKHISARLQMYEHDHGKAMSCTAIAQMLSTMLYYRRFFPYYTYNIL 126

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPL 136
            GLD+EGKGCV+++D VGSYER  Y + GS S L+ P LDNQ+   +   +P     TPL
Sbjct: 127 AGLDSEGKGCVFSFDPVGSYEREVYRAGGSASALLQPLLDNQIGFKNQEGVPH----TPL 182

Query: 137 SEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           +  +AV LVK  F SA ERDIYTGD + I V++  G+  E   LR+D
Sbjct: 183 TRDKAVALVKDVFTSAAERDIYTGDAVIINVVSSEGVSEEAFPLRRD 229


>gi|260799786|ref|XP_002594865.1| hypothetical protein BRAFLDRAFT_124448 [Branchiostoma floridae]
 gi|229280102|gb|EEN50876.1| hypothetical protein BRAFLDRAFT_124448 [Branchiostoma floridae]
          Length = 235

 Score =  171 bits (433), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 86/172 (50%), Positives = 110/172 (63%), Gaps = 8/172 (4%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D  V+   GF  DV  L K+L AR   Y+H+HNK MSC  +A +LS  LYY+RFFPYY++
Sbjct: 70  DMTVLGCCGFHGDVLTLTKMLDARLKNYKHEHNKTMSCKSIAAMLSTVLYYRRFFPYYTY 129

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N+L GLD EGKGCVY++D +GSYER  Y + GS S L+ P LDNQ+       +     V
Sbjct: 130 NILAGLDEEGKGCVYSFDPIGSYEREVYRAGGSASALLQPLLDNQIG------MKNMQGV 183

Query: 134 T--PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              P+ + +AV LVK  F SA ERDIYTGD++ I V+ K GI  E   LR+D
Sbjct: 184 QRLPVPKEKAVALVKDVFISAAERDIYTGDQIIINVITKDGIQEESFPLRRD 235


>gi|443688987|gb|ELT91509.1| hypothetical protein CAPTEDRAFT_172055 [Capitella teleta]
          Length = 229

 Score =  170 bits (431), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 85/172 (49%), Positives = 111/172 (64%), Gaps = 8/172 (4%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+AS+GF  DV    K+L AR  +Y+H+H K+MS   +A +L+  LY+KRFFPYY +
Sbjct: 64  DKTVLASAGFHGDVLTEIKVLEARLKMYEHEHGKKMSSQAIAAMLATILYHKRFFPYYVY 123

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKGCVY+YD VGSYER  Y + GS   L+ P LDNQ+          Q  V
Sbjct: 124 NIIGGLDEEGKGCVYSYDPVGSYEREVYRAGGSAGPLLQPLLDNQIG------FKNQQGV 177

Query: 134 --TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
               LS+ +A+ L+K  F SA ERDIYTGD L + V+ K G+  E   LR+D
Sbjct: 178 EKVSLSKDKAIKLIKDIFISAAERDIYTGDSLHLKVVTKEGVSEETFPLRRD 229


>gi|449020004|dbj|BAM83406.1| 20S core proteasome subunit beta 6 [Cyanidioschyzon merolae strain
           10D]
          Length = 244

 Score =  169 bits (429), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 85/171 (49%), Positives = 113/171 (66%), Gaps = 1/171 (0%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+ V+AS+G  AD + L K+L +R  IY++QH K+MS   +AQLLSNTLY +RFFP Y+F
Sbjct: 74  DQAVLASAGMGADRQYLHKILRSRLEIYRYQHQKEMSLGAIAQLLSNTLYSRRFFPIYAF 133

Query: 74  NVLGGLD-NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           NVLGG+D N G+G V+ YDA+GS+E+V     GSG TL+ P LD QL       +P    
Sbjct: 134 NVLGGIDANTGEGFVFGYDAIGSFEKVKVVCSGSGQTLVQPVLDQQLAGRQKYDVPDDQR 193

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           +  LS AEA++L +  F SA ERDI TGD LE+  +   G+  E  ELR+D
Sbjct: 194 MASLSLAEAIELTRDVFNSAAERDILTGDALELYAVTASGVRCERFELRRD 244


>gi|357605013|gb|EHJ64427.1| proteasome subunit beta 1 [Danaus plexippus]
          Length = 232

 Score =  169 bits (429), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 86/173 (49%), Positives = 109/173 (63%), Gaps = 8/173 (4%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           +D+ V+ ++G   D   L +LL AR  +Y+H+HNK MS P +AQ+LS  LYYKRFFPYY 
Sbjct: 66  SDRTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKAMSTPAVAQMLSTMLYYKRFFPYYI 125

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            NVL GLD EGKGCVY+YD +G  ER  Y + GS    + P LDNQ+       L     
Sbjct: 126 SNVLAGLDAEGKGCVYSYDPIGHCERSNYRAGGSAGAQLQPLLDNQIG------LKNMQN 179

Query: 133 VT--PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           VT  PLS  +A+ L+K  F SA ERDIYTGD + I+++   GI  E  ELRKD
Sbjct: 180 VTEAPLSREKALALLKDVFISAAERDIYTGDSIYILIITANGIQEEKFELRKD 232


>gi|195998844|ref|XP_002109290.1| hypothetical protein TRIADDRAFT_20878 [Trichoplax adhaerens]
 gi|190587414|gb|EDV27456.1| hypothetical protein TRIADDRAFT_20878 [Trichoplax adhaerens]
          Length = 235

 Score =  168 bits (426), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 78/173 (45%), Positives = 115/173 (66%), Gaps = 8/173 (4%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            +K  + + GFQ DV  L +LL AR  +Y+ +H K+MS   ++Q+LS  LYY+RFFPYY+
Sbjct: 69  TEKTFLGTCGFQGDVLTLTRLLNARLTMYEFEHRKKMSSTAISQMLSTVLYYRRFFPYYT 128

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FN+L G+D +GKGC+Y+YDAVG+YE+  Y + G+ S+++ P LDNQ+   +      Q+ 
Sbjct: 129 FNILAGIDTDGKGCIYSYDAVGNYEKHTYHASGTASSMLQPLLDNQVGYLN------QEG 182

Query: 133 V--TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           V   PL+  +A  L+K  F SATERD+YTGD L IV +   G+  ++  LR+D
Sbjct: 183 VRRVPLTIDKARTLIKDVFISATERDMYTGDSLHIVTITSDGVTEDHFPLRRD 235


>gi|326428761|gb|EGD74331.1| proteasome subunit beta type-1 [Salpingoeca sp. ATCC 50818]
          Length = 180

 Score =  167 bits (424), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 83/176 (47%), Positives = 112/176 (63%), Gaps = 6/176 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+AS+GF  DV  L K +  R   Y++QH K MS P  AQ+L+  LY KRFFPYY++
Sbjct: 5   DKTVLASAGFHGDVLTLVKRIGVRMQNYEYQHRKPMSTPACAQMLATMLYGKRFFPYYTY 64

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKS----PSPLLLPA 129
           N+L GLD +GKGCV++YD VGSYER  Y + G+ S L+ PFLDNQ ++    P  +    
Sbjct: 65  NILAGLDADGKGCVFSYDPVGSYEREHYRAAGTASALLQPFLDNQARALARIPDYIGRKN 124

Query: 130 QDAVT--PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           Q  V   P+S+  A+ ++K  F SA ERDIYTGD ++I ++ K G+      LR D
Sbjct: 125 QQGVVFEPISKERAMTIIKDVFTSAAERDIYTGDAVDIRIVTKDGLEEHRFPLRCD 180


>gi|401402253|ref|XP_003881203.1| hypothetical protein NCLIV_042370 [Neospora caninum Liverpool]
 gi|325115615|emb|CBZ51170.1| hypothetical protein NCLIV_042370 [Neospora caninum Liverpool]
          Length = 246

 Score =  167 bits (423), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 82/170 (48%), Positives = 110/170 (64%), Gaps = 5/170 (2%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+A+SG QAD   L  LL  R   Y HQH    S   +AQLLS  LY +RFFP+Y+F
Sbjct: 82  DKVVLATSGMQADKTTLHNLLQIRIEQYTHQHRHPPSLNAIAQLLSTMLYSRRFFPFYTF 141

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           NVL G+D  GKG VY YDA+GS+E   Y+  G+G+ LIMP LDNQ+   +      Q   
Sbjct: 142 NVLCGIDENGKGAVYGYDAIGSFEAARYNCAGTGAHLIMPVLDNQISRNN-----QQGEK 196

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            PL+  + VD++K+  ASA ERDI+TGD+ E+V++++ GI +  M+LR D
Sbjct: 197 APLTREQVVDIIKSAVASAGERDIFTGDQAEVVMISQSGIEKTLMDLRAD 246


>gi|340374856|ref|XP_003385953.1| PREDICTED: proteasome subunit beta type-1-B-like [Amphimedon
           queenslandica]
          Length = 223

 Score =  167 bits (422), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 81/171 (47%), Positives = 112/171 (65%), Gaps = 4/171 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            D  V+ S GFQ DV  L K++ A+  IY H + K+MSC  +AQLLS  LY +RFFPYY+
Sbjct: 57  GDNVVLGSCGFQGDVTTLNKVIEAQLKIYDHIYQKKMSCESLAQLLSTILYTRRFFPYYT 116

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           +N+L GLD++GKGCV+++D +GSYER  Y + GS S+++ P LDNQ+     LL      
Sbjct: 117 YNILAGLDSKGKGCVFSFDPIGSYEREVYRAGGSASSMLQPLLDNQIG----LLNQTGVE 172

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PLS  +AV LV   F SA ERDIYTGD + I +++  G+  + + LR+D
Sbjct: 173 KKPLSVEKAVQLVTDVFTSAAERDIYTGDGIRINIISADGVDIKEVPLRRD 223


>gi|442749997|gb|JAA67158.1| Putative 20s proteasome regulatory subunit beta type psmb1/pre7
           [Ixodes ricinus]
          Length = 232

 Score =  166 bits (421), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 80/171 (46%), Positives = 110/171 (64%), Gaps = 4/171 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           +DKC++ S G   D+    + L AR  +Y H+H+K MS P +AQL+   LY+KRFFPYY 
Sbjct: 66  SDKCILGSGGCWCDILTFTRFLEARMKMYLHEHHKPMSTPAVAQLIVTMLYHKRFFPYYI 125

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            N+L GLD EGKGC+Y+YD VG  ERV Y S GSGS L+ P LD+Q+   + +      A
Sbjct: 126 SNILAGLDEEGKGCIYSYDPVGHCERVQYRSGGSGSALLQPLLDSQIGFKNQV---GAVA 182

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           V P  E  A+ ++K  F SA ERD+YTGD + + +++K G+H E   LR+D
Sbjct: 183 VPPTRE-RAISIIKDVFISAAERDMYTGDSVIVNIIDKDGVHEERFPLRRD 232


>gi|211939905|gb|ACJ13433.1| proteasome subunit beta 1 [Helicoverpa armigera]
          Length = 232

 Score =  166 bits (420), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 84/173 (48%), Positives = 110/173 (63%), Gaps = 8/173 (4%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           +DK V+ ++G   D   L +LL+AR  +Y+H+HNK MS P +AQ+LS  LYYKRFFPYY 
Sbjct: 66  SDKTVLGATGCWCDTLTLTRLLSARMQMYEHEHNKSMSTPAVAQMLSTMLYYKRFFPYYV 125

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            NVL GLD +GKGCVY+YD +G  ER  Y + GS    + P LDNQ+       L     
Sbjct: 126 SNVLAGLDADGKGCVYSYDPIGHCERSNYRAGGSAGAQLQPLLDNQIG------LKNMQN 179

Query: 133 VT--PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           VT  P+ + +A+ L+K  F SA ERDIYTGD + I+++   GI  E  ELRKD
Sbjct: 180 VTEAPIPKEKALALLKDVFISAAERDIYTGDCIYILIITASGIQEEKFELRKD 232


>gi|428182497|gb|EKX51358.1| 20S proteasome subunit beta type 1 [Guillardia theta CCMP2712]
          Length = 230

 Score =  166 bits (420), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 82/169 (48%), Positives = 114/169 (67%), Gaps = 4/169 (2%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           K  +ASSG  AD+  LQK L  +  +Y HQH K+MS P +AQ+L+ TLY++RFFPYY+FN
Sbjct: 66  KTCIASSGCNADMVTLQKYLKFKIQMYLHQHGKEMSTPAVAQMLATTLYHRRFFPYYTFN 125

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 134
           ++GGLD  G+GCV++YDA+G +ER+ Y+  GSG  LI PFLDN +   +    P  +   
Sbjct: 126 IVGGLDQNGEGCVFSYDAIGCFERLKYTVSGSGHALIEPFLDNLVAYKNTDNKPTIER-- 183

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             S  E ++LVK  F+SA ERDIYTGD ++I +++K G   E   L+KD
Sbjct: 184 --SCDETLELVKDIFSSAGERDIYTGDFVDIYIIDKNGTRYEQFPLKKD 230


>gi|328766922|gb|EGF76974.1| hypothetical protein BATDEDRAFT_92136 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 231

 Score =  166 bits (420), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 88/171 (51%), Positives = 108/171 (63%), Gaps = 12/171 (7%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V+A+ G  AD + L K +  R   YQ QH+K MS P MAQ+LS  LYYKRFFPY+S+  +
Sbjct: 69  VLATGGMFADSQTLMKRIQQRLEWYQFQHDKNMSAPAMAQMLSTILYYKRFFPYFSWCSV 128

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK----SPSPLLLPAQDA 132
           GGLD  GKGCVYTYD VG+YERV +   GS   LI PFLDNQ+     S +   LP+ + 
Sbjct: 129 GGLDEHGKGCVYTYDPVGNYERVSWDCGGSAGKLIQPFLDNQIGKHHMSGASKSLPSLET 188

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           V          +VK  F SATERDIYTGD LEI V+ K GI +E + L+ D
Sbjct: 189 VK--------RIVKDAFTSATERDIYTGDFLEIFVITKDGITKEMLPLKLD 231


>gi|335955152|gb|AEH76582.1| proteasome subunit beta type [Epinephelus bruneus]
          Length = 225

 Score =  165 bits (417), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 81/172 (47%), Positives = 110/172 (63%), Gaps = 8/172 (4%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D  V+  SGF  D   L K++ AR  +Y+H +NK M+C  +A +LS  LY +RFFPYY +
Sbjct: 60  DTTVIGCSGFHGDCLTLTKIIDARLKMYKHSNNKTMTCGAIAAMLSTILYGRRFFPYYVY 119

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  Y + GS S ++ P LDNQ+           + V
Sbjct: 120 NIIGGLDEEGKGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIG------FKNMEGV 173

Query: 134 --TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              PL++ +AV LVK  F SA ERD+YTGD L I ++NK GI  + + LRKD
Sbjct: 174 QHVPLTQDKAVQLVKDVFISAAERDVYTGDALRICIINKEGISEQTIPLRKD 225


>gi|221117643|ref|XP_002165958.1| PREDICTED: proteasome subunit beta type-1-A-like [Hydra
           magnipapillata]
          Length = 226

 Score =  164 bits (416), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 79/171 (46%), Positives = 110/171 (64%), Gaps = 4/171 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            D  ++ S GF  DV  L K +  R ++Y+H+H K MSC  +AQ+LS TLYYKRFFPYY+
Sbjct: 60  TDTTILGSCGFHGDVLTLTKNIKTRLVMYEHEHFKTMSCSSIAQMLSTTLYYKRFFPYYT 119

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           +N++ GLD++GKG +Y++D VGSYER  Y + GS S ++  FLDNQ+   +     A+ +
Sbjct: 120 YNIIAGLDSDGKGAIYSFDPVGSYERETYRAGGSCSAMLQSFLDNQIGQKN----LAKKS 175

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PLS    V+L+K  F SA ERDI TGD + I ++ K G   E   LR+D
Sbjct: 176 DIPLSLERCVELIKDVFISAAERDIETGDGVLISIITKEGTKSEVFPLRRD 226


>gi|221505718|gb|EEE31363.1| proteasome subunit beta type, putative [Toxoplasma gondii VEG]
          Length = 361

 Score =  164 bits (416), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 81/170 (47%), Positives = 109/170 (64%), Gaps = 5/170 (2%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+A+SG +AD   L  LL  R   Y HQH    S   +AQLLS  LY +RFFP+Y+F
Sbjct: 197 DKVVLATSGMEADKTTLHNLLKIRIEQYTHQHRHPPSLNAIAQLLSTVLYSRRFFPFYTF 256

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           NVL G+D  GKG VY YDA+GS+E   Y+  G+G+ LIMP LDNQ+   +      Q   
Sbjct: 257 NVLCGIDENGKGAVYGYDAIGSFEPSRYNCAGTGAHLIMPVLDNQISRNN-----QQGEK 311

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            PL+    V++VK+  ASA ERDI+TGD+ E+V++++ GI +  M+LR D
Sbjct: 312 APLTRERIVEIVKSAVASAGERDIFTGDQAEVVMISQSGIEKTLMDLRAD 361


>gi|221484304|gb|EEE22600.1| proteasome subunit beta type, putative [Toxoplasma gondii GT1]
          Length = 359

 Score =  164 bits (415), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 81/170 (47%), Positives = 109/170 (64%), Gaps = 5/170 (2%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+A+SG +AD   L  LL  R   Y HQH    S   +AQLLS  LY +RFFP+Y+F
Sbjct: 195 DKVVLATSGMEADKTTLHNLLKIRIEQYTHQHRHPPSLNAIAQLLSTVLYSRRFFPFYTF 254

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           NVL G+D  GKG VY YDA+GS+E   Y+  G+G+ LIMP LDNQ+   +      Q   
Sbjct: 255 NVLCGIDENGKGAVYGYDAIGSFEPSRYNCAGTGAHLIMPVLDNQISRNN-----QQGEK 309

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            PL+    V++VK+  ASA ERDI+TGD+ E+V++++ GI +  M+LR D
Sbjct: 310 APLTRERIVEIVKSAVASAGERDIFTGDQAEVVMISQSGIEKTLMDLRAD 359


>gi|237838257|ref|XP_002368426.1| proteasome subunit beta type 1, putative [Toxoplasma gondii ME49]
 gi|211966090|gb|EEB01286.1| proteasome subunit beta type 1, putative [Toxoplasma gondii ME49]
          Length = 359

 Score =  164 bits (415), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 81/170 (47%), Positives = 109/170 (64%), Gaps = 5/170 (2%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+A+SG +AD   L  LL  R   Y HQH    S   +AQLLS  LY +RFFP+Y+F
Sbjct: 195 DKVVLATSGMEADKTTLHNLLKIRIEQYTHQHRHPPSLNAIAQLLSTVLYSRRFFPFYTF 254

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           NVL G+D  GKG VY YDA+GS+E   Y+  G+G+ LIMP LDNQ+   +      Q   
Sbjct: 255 NVLCGIDENGKGAVYGYDAIGSFEPSRYNCAGTGAHLIMPVLDNQISRNN-----QQGEK 309

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            PL+    V++VK+  ASA ERDI+TGD+ E+V++++ GI +  M+LR D
Sbjct: 310 APLTRERIVEIVKSAVASAGERDIFTGDQAEVVMISQSGIEKTLMDLRAD 359


>gi|47217169|emb|CAG11005.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 237

 Score =  163 bits (413), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 80/172 (46%), Positives = 109/172 (63%), Gaps = 8/172 (4%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D  V+  SGF  D   L K++ AR  +Y+H +NK MS   +A +LS  LY +RFFPYY +
Sbjct: 72  DTTVIGCSGFHGDCLTLTKIIDARLKMYKHSNNKTMSSGAIAAMLSTILYGRRFFPYYVY 131

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  Y + GS S ++ P LDNQ+           D V
Sbjct: 132 NIIGGLDEEGKGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIG------FKNMDGV 185

Query: 134 --TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              PL++ +A+ LVK  F SA ERD+YTGD L I ++ K GI  + ++LRKD
Sbjct: 186 QQVPLTQEKAIQLVKDVFISAAERDVYTGDALHICIITKEGIQEQTVQLRKD 237


>gi|383853088|ref|XP_003702056.1| PREDICTED: proteasome subunit beta type-1-like [Megachile
           rotundata]
          Length = 236

 Score =  162 bits (411), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 78/173 (45%), Positives = 110/173 (63%), Gaps = 8/173 (4%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           + K V+  SG   D   L + L+AR  +Y+H+H K+M+ P +AQ+LS  LYY+RFFPYY 
Sbjct: 70  SSKTVLGCSGCWCDTLTLTRFLSARMQMYEHEHQKEMATPAVAQMLSTMLYYRRFFPYYI 129

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            N++GGLD++G GCVY+YD +G  E   Y + GS   L+ P LDNQ+   +      Q+ 
Sbjct: 130 SNIIGGLDDKGHGCVYSYDPIGHCEAAKYRAGGSAGALLQPLLDNQIGYKN------QEG 183

Query: 133 V--TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           V   PL++ +A+ ++K  F SA ERDIYTGD + I ++ K GI  E  ELRKD
Sbjct: 184 VEPVPLTQEKAIAVIKDVFISAAERDIYTGDSISIKIITKDGIKDESFELRKD 236


>gi|452821727|gb|EME28754.1| 20S proteasome subunit beta 6 [Galdieria sulphuraria]
          Length = 232

 Score =  162 bits (410), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 82/171 (47%), Positives = 111/171 (64%), Gaps = 4/171 (2%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           ++ V+A++G  AD   L K++ AR  IY+ Q +K       AQLLSNTLYY+RFFPYY+F
Sbjct: 65  NRVVLATAGMFADTATLHKVIKARVKIYEEQQDKPFGLHSAAQLLSNTLYYRRFFPYYTF 124

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           NVLGGLD +G+G VY +DA+GS E+V     G+G  LI P LDNQ++            +
Sbjct: 125 NVLGGLDEDGQGFVYGFDAIGSGEKVKVVCNGTGQALIQPILDNQVEKKQQY---ENKQI 181

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK-GGIHREYMELRKD 183
           T LS  EAVDL+K  F SA ERDIYTGD ++I ++ K  G+  E  +L++D
Sbjct: 182 TKLSLQEAVDLIKDVFTSAGERDIYTGDAIDICIITKEKGVLVETFQLKQD 232


>gi|348534148|ref|XP_003454565.1| PREDICTED: proteasome subunit beta type-1-A-like [Oreochromis
           niloticus]
          Length = 237

 Score =  162 bits (410), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 81/170 (47%), Positives = 111/170 (65%), Gaps = 4/170 (2%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D  V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 72  DTTVLGCSGFHGDCLTLTKIIDARLKMYKHSNNKTMTSGAIAAMLSTILYSRRFFPYYVY 131

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  Y + GS S ++ P LDNQ+   +   +   + V
Sbjct: 132 NIIGGLDEEGKGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKN---MEGVEHV 188

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            PL++ +AV LVK  F SA ERD+YTGD L I V+ K GI+ E + LRKD
Sbjct: 189 -PLTKDKAVQLVKDVFISAAERDVYTGDALRICVITKEGINEETIPLRKD 237


>gi|390365759|ref|XP_001177076.2| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1-like
           [Strongylocentrotus purpuratus]
          Length = 201

 Score =  162 bits (410), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 81/170 (47%), Positives = 107/170 (62%), Gaps = 4/170 (2%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D  V+  +GF  DV  L K+L AR  + +H+H+K+M    +A +LS  LYY+RFFPYY++
Sbjct: 36  DGTVLGCAGFHGDVLTLTKVLTARLKMXEHEHHKKMFTSAIAAMLSTILYYRRFFPYYTY 95

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N+L GLD EGKGCVY++D VGSYER  Y + GS S L+ P LDNQ+   +      +   
Sbjct: 96  NILAGLDEEGKGCVYSFDPVGSYERETYRAAGSSSALLQPLLDNQIGGKNQEGWVKE--- 152

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            P+   +AV LVK  F SA ERDIYTGD + + VL K G   E   LR+D
Sbjct: 153 -PIPVDKAVALVKDVFISAAERDIYTGDGIVLHVLTKDGCKEERFPLRRD 201


>gi|17380207|sp|Q9IB84.1|PSB1A_CARAU RecName: Full=Proteasome subunit beta type-1-A; AltName: Full=20S
           proteasome beta-6 subunit A; Short=B6-A
 gi|7768839|dbj|BAA95591.1| 20S proteasome beta 6 subunit [Carassius auratus]
          Length = 238

 Score =  162 bits (410), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 80/170 (47%), Positives = 111/170 (65%), Gaps = 4/170 (2%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D  V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 73  DTTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVY 132

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EG+G VY++D VGSY+R  Y + GS S ++ P LDNQ+   +   +   + V
Sbjct: 133 NIIGGLDEEGRGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKN---MENVEQV 189

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            PLS+ +AV LVK  F SA ERD+YTGD L+I ++ K GI  E + LRKD
Sbjct: 190 -PLSQEKAVQLVKDVFISAAERDVYTGDALKICIITKEGIREEIVPLRKD 238


>gi|17380206|sp|Q9IB83.1|PSB1B_CARAU RecName: Full=Proteasome subunit beta type-1-B; AltName: Full=20S
           proteasome beta-6 subunit B; Short=B6-B
 gi|7768841|dbj|BAA95592.1| 20S proteasome beta 6 subunit [Carassius auratus]
          Length = 237

 Score =  162 bits (409), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 80/170 (47%), Positives = 111/170 (65%), Gaps = 4/170 (2%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D  V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 72  DTTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVY 131

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EG+G VY++D VGSY+R  Y + GS S ++ P LDNQ+   +   +   + V
Sbjct: 132 NIIGGLDEEGRGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKN---MENVEQV 188

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            PLS+ +AV LVK  F SA ERD+YTGD L+I ++ K GI  E + LRKD
Sbjct: 189 -PLSQEKAVQLVKDVFISAAERDVYTGDALKICIITKEGIREEIVPLRKD 237


>gi|340716619|ref|XP_003396794.1| PREDICTED: proteasome subunit beta type-1-like [Bombus terrestris]
          Length = 236

 Score =  161 bits (408), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 80/173 (46%), Positives = 108/173 (62%), Gaps = 8/173 (4%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           + K ++  SG   D   L +LL+AR  +Y+H+H K+M    +AQ+LS  LYYKRFFPYY 
Sbjct: 70  SSKTILGCSGCWCDTLTLTRLLSARMQMYEHEHQKEMPTLAVAQMLSTMLYYKRFFPYYV 129

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            N+LGGLD +GKGCVY+YD +G  E   Y + GS   L+ P LDNQ+   +      Q+ 
Sbjct: 130 SNILGGLDEDGKGCVYSYDPIGHCEVTKYRAGGSAGALLQPLLDNQIGYKN------QEG 183

Query: 133 V--TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           V   PL++ +AV ++K  F SA ERDIYTGD + I ++ K GI     ELRKD
Sbjct: 184 VEPVPLTQEKAVAIIKDVFISAAERDIYTGDSISIKIITKDGIQDSTFELRKD 236


>gi|350396993|ref|XP_003484732.1| PREDICTED: proteasome subunit beta type-1-like [Bombus impatiens]
          Length = 236

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 80/173 (46%), Positives = 108/173 (62%), Gaps = 8/173 (4%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           + K ++  SG   D   L +LL+AR  +Y+H+H K+M    +AQ+LS  LYYKRFFPYY 
Sbjct: 70  SSKTILGCSGCWCDTLTLTRLLSARMQMYEHEHQKEMPTLAVAQMLSTMLYYKRFFPYYV 129

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            N+LGGLD +GKGCVY+YD +G  E   Y + GS   L+ P LDNQ+   +      Q+ 
Sbjct: 130 SNILGGLDEDGKGCVYSYDPIGHCEVTKYRAGGSAGALLQPLLDNQIGYKN------QEG 183

Query: 133 V--TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           V   PL++ +AV ++K  F SA ERDIYTGD + I ++ K GI     ELRKD
Sbjct: 184 VEPIPLTQEKAVAIIKDVFISAAERDIYTGDSISIKIITKDGIQDSTFELRKD 236


>gi|410912074|ref|XP_003969515.1| PREDICTED: proteasome subunit beta type-1-B-like [Takifugu
           rubripes]
          Length = 237

 Score =  161 bits (407), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 80/170 (47%), Positives = 109/170 (64%), Gaps = 4/170 (2%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D  V+  SGF  D   L K++ AR  +Y+H +NK MS   +A +LS  LY +RFFPYY +
Sbjct: 72  DTTVLGCSGFHGDCLTLTKIIDARLKMYKHSNNKTMSSGAIAAMLSTILYGRRFFPYYVY 131

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  Y + GS S ++ P LDNQ+   +  +   Q   
Sbjct: 132 NIIGGLDEEGKGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKN--MENVQQ-- 187

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            PLS+ +A+ LVK  F SA ERD+YTGD L I ++ K GI  + + LRKD
Sbjct: 188 VPLSQEKAIQLVKDVFISAAERDVYTGDALRICIITKEGIKEQTIPLRKD 237


>gi|389611001|dbj|BAM19111.1| proteasome 26kD subunit [Papilio polytes]
          Length = 232

 Score =  161 bits (407), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 79/173 (45%), Positives = 109/173 (63%), Gaps = 8/173 (4%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           +++ V+ ++G   D   L +LL AR  +Y+H+HNK M+ P +AQ+LS  LYYKRFFPYY 
Sbjct: 66  SERTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKAMTTPAVAQMLSTMLYYKRFFPYYV 125

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            N+L GLD +GKGC+Y+YD +G  ER  Y + GS    + P LDNQ+       L     
Sbjct: 126 SNILAGLDADGKGCIYSYDPIGHCERSTYRAGGSAGAQLQPLLDNQIG------LKNMQN 179

Query: 133 VT--PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           VT  P+ + +A+ L+K  F SA ERDIYTGD + I+++   GI  E  ELRKD
Sbjct: 180 VTEAPVPKEKALALLKDVFISAAERDIYTGDCIYIIIITANGIQEEKFELRKD 232


>gi|148227103|ref|NP_001080435.1| proteasome beta 1 subunit [Xenopus laevis]
 gi|27694605|gb|AAH43739.1| Psmb1-prov protein [Xenopus laevis]
 gi|114107802|gb|AAI23122.1| Psmb1 protein [Xenopus laevis]
          Length = 239

 Score =  161 bits (407), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 77/170 (45%), Positives = 109/170 (64%), Gaps = 4/170 (2%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  +GF AD   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 74  DKTVIGCTGFHADCLTLTKIIEARLKMYKHSNNKTMTSGAIAAMLSTILYSRRFFPYYVY 133

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  Y + GS S ++ P LDNQ+   +   +      
Sbjct: 134 NIIGGLDEEGKGAVYSFDPVGSYQRDAYKAGGSASAMLQPLLDNQIGYKNMQNVEQ---- 189

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            PL+  +A+ L+K  F SA ERD+YTGD L I ++ K G+  E + LRKD
Sbjct: 190 LPLTLEKALKLIKDVFISAAERDVYTGDALHISIVTKDGVREESISLRKD 239


>gi|384485678|gb|EIE77858.1| hypothetical protein RO3G_02562 [Rhizopus delemar RA 99-880]
          Length = 232

 Score =  160 bits (406), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 84/172 (48%), Positives = 111/172 (64%), Gaps = 5/172 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           ++  V+A +GF AD   L+K+L  R   Y+  H+K MSC  +AQ+LS TLY KRFFPYYS
Sbjct: 65  SETSVIAMNGFHADGLTLKKVLDQRLKWYKFSHDKDMSCTALAQMLSITLYQKRFFPYYS 124

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           F VLGG+D EGKG VY YDA+GSYER    + GS + LI PFLDNQ+   +   +  +D 
Sbjct: 125 FCVLGGVDEEGKGAVYCYDAIGSYEREKCRASGSAAALIQPFLDNQVSKKNMQNVSTED- 183

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG-IHREYMELRKD 183
              +   EA+ +VK  F SATERDIYTGD L+I ++ K   +  +   L+KD
Sbjct: 184 ---IELDEAIKIVKDAFTSATERDIYTGDNLQIFIIRKDQPVEIQVHPLKKD 232


>gi|72537676|gb|AAZ73764.1| 20S proteasome beta subunit [Cirrhinus molitorella]
          Length = 237

 Score =  160 bits (406), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 80/170 (47%), Positives = 110/170 (64%), Gaps = 4/170 (2%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D  V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 72  DTTVLGCSGFHGDCLTLTKIIDARLKMYKHSNNKTMTSGAIAAMLSTILYGRRFFPYYVY 131

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EG+G VY++D VGSY+R  Y + GS S ++ P LDNQ+   +   +   + V
Sbjct: 132 NIIGGLDEEGRGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKN---MENVEEV 188

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            PL+  +AV LVK  F SA ERD+YTGD LEI ++ K GI  E + LRKD
Sbjct: 189 -PLTLEKAVQLVKDVFISAAERDVYTGDALEICIITKEGIREEIVPLRKD 237


>gi|226372486|gb|ACO51868.1| Proteasome subunit beta type-1-A [Rana catesbeiana]
          Length = 240

 Score =  160 bits (406), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 79/170 (46%), Positives = 109/170 (64%), Gaps = 4/170 (2%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 75  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKTMTSNAIAAMLSTILYSRRFFPYYVY 134

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  Y + GS S ++ P LDNQ+   +   +      
Sbjct: 135 NIIGGLDEEGKGAVYSFDPVGSYQRDAYKAGGSASAMLQPLLDNQIGYKNMQNVEH---- 190

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            PL+  +A+ LVK  F SA ERD+YTGD L+I ++ K GI  E + LRKD
Sbjct: 191 LPLTLEKALQLVKDVFISAAERDVYTGDALKISIVTKDGIKEESIPLRKD 240


>gi|126311312|ref|XP_001381658.1| PREDICTED: proteasome subunit beta type-1-like [Monodelphis
           domestica]
          Length = 244

 Score =  160 bits (405), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 80/171 (46%), Positives = 109/171 (63%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 79  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 138

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +      Q+  
Sbjct: 139 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVE 193

Query: 134 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PLS   A+ LVK  F SA ERD+YTGD L+I ++ K GI  E + LRKD
Sbjct: 194 HVPLSLERAMQLVKDVFISAAERDVYTGDSLKICIVTKDGIKEETIPLRKD 244


>gi|389609037|dbj|BAM18130.1| proteasome 26kD subunit [Papilio xuthus]
          Length = 232

 Score =  160 bits (405), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 78/172 (45%), Positives = 110/172 (63%), Gaps = 6/172 (3%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           +++ V+ ++G   D   L +LL AR  +Y+H+HNK M+ P +AQ+LS  LYYKRFFPYY 
Sbjct: 66  SERTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKAMTTPAVAQMLSTMLYYKRFFPYYV 125

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD- 131
            N+L GLD +GKGC+Y+YD +G  ER  Y + GS    + P LDNQ+      L   Q+ 
Sbjct: 126 SNILAGLDADGKGCIYSYDPIGHCERSTYRAGGSAGAQLQPLLDNQIG-----LKNMQNV 180

Query: 132 AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           +  P+ + +A+ L+K  F SA ERDIYTGD + I+++   GI  E  ELRKD
Sbjct: 181 SEAPVPKEKALALLKDVFISAAERDIYTGDCIYIIIITANGIQEEKFELRKD 232


>gi|332019508|gb|EGI59987.1| Proteasome subunit beta type-1 [Acromyrmex echinatior]
          Length = 237

 Score =  160 bits (405), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 78/173 (45%), Positives = 108/173 (62%), Gaps = 8/173 (4%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           +D  ++  SG   D   L +LL+AR  +Y+H+H K+MS P  AQ+LS  LY+KRFFPYY 
Sbjct: 71  SDTTILGCSGCWCDTTTLTRLLSARMQMYKHEHQKEMSTPATAQMLSIMLYHKRFFPYYV 130

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            N+L GLD  GKGC+Y+YD +G  E+  Y + GS   L+ P LDNQ+   +      Q+ 
Sbjct: 131 SNILAGLDENGKGCIYSYDPIGHCEKTTYRAGGSAGALLQPLLDNQIGYKN------QEG 184

Query: 133 VT--PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           VT  PL++ +A+ ++K  F SA ERDIYTGD + I ++ K GI      LRKD
Sbjct: 185 VTPAPLTQEKAIAILKDVFTSAAERDIYTGDGITIKIITKDGIEISSFALRKD 237


>gi|307214019|gb|EFN89226.1| Proteasome subunit beta type-1 [Harpegnathos saltator]
          Length = 236

 Score =  160 bits (405), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 78/169 (46%), Positives = 106/169 (62%), Gaps = 8/169 (4%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           ++  SG   D   L +LL+AR  +Y+H+H K+MS P  AQ+LS  LYYKRFFPYY  N+L
Sbjct: 74  ILGCSGCWCDTLTLTRLLSARMQMYKHEHQKEMSTPATAQMLSTMLYYKRFFPYYVSNIL 133

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP- 135
            GLD  GKGC+Y+YD +G  E+  Y + GS   L+ P LDNQ+   +      Q+ +TP 
Sbjct: 134 AGLDENGKGCIYSYDPIGHCEKTTYRAGGSAGALLQPLLDNQIGYKN------QEGITPV 187

Query: 136 -LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            L++ +AV ++K  F SA ERDIYTGD + I ++ K GI      LRKD
Sbjct: 188 NLTQEKAVAILKDVFTSAAERDIYTGDGITIKIITKDGIQDISFALRKD 236


>gi|119567805|gb|EAW47420.1| proteasome (prosome, macropain) subunit, beta type, 1, isoform
           CRA_a [Homo sapiens]
          Length = 219

 Score =  160 bits (405), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 79/170 (46%), Positives = 107/170 (62%), Gaps = 4/170 (2%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 54  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 113

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +   +      
Sbjct: 114 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEH---- 169

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            PLS   A+ LVK  F SA ERD+YTGD L I ++ K GI  E + LRKD
Sbjct: 170 VPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVSLRKD 219


>gi|395535314|ref|XP_003769673.1| PREDICTED: proteasome subunit beta type-1 [Sarcophilus harrisii]
          Length = 244

 Score =  160 bits (404), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 80/171 (46%), Positives = 109/171 (63%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 79  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 138

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +      Q+  
Sbjct: 139 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVE 193

Query: 134 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PLS   A+ LVK  F SA ERD+YTGD L+I ++ K GI  E + LRKD
Sbjct: 194 HIPLSLERAMQLVKDVFISAAERDVYTGDSLKICIVTKDGIKEETVPLRKD 244


>gi|151301141|ref|NP_001093092.1| proteasome beta subunit [Bombyx mori]
 gi|95102764|gb|ABF51323.1| proteasome beta subunit [Bombyx mori]
          Length = 232

 Score =  160 bits (404), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 80/173 (46%), Positives = 108/173 (62%), Gaps = 8/173 (4%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           ++  V+ ++G   D   L +LL AR  +Y+H+HNK M+ P +AQ+LS  LYYKRFFPYY 
Sbjct: 66  SESTVLGATGCWCDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYV 125

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            NVL GLD++GKGCVY+YD +G   R  + + GS +  + P LDNQ+       L     
Sbjct: 126 SNVLAGLDSDGKGCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIG------LKNMQN 179

Query: 133 VT--PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           VT  PL   +A+ L+K  F SA ERDIYTGD + I+++   GI  E  ELRKD
Sbjct: 180 VTEAPLPREKALALLKDVFISAAERDIYTGDSIYILIITASGIQEEKFELRKD 232


>gi|387017846|gb|AFJ51041.1| Proteasome subunit beta type-1-like [Crotalus adamanteus]
          Length = 239

 Score =  160 bits (404), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 82/172 (47%), Positives = 107/172 (62%), Gaps = 8/172 (4%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D  V+  SGF  D   L K+L AR  +Y+H +NK MS   +A +LS  LY +RFFPYY +
Sbjct: 74  DTTVIGCSGFHGDCLTLTKILEARLKMYKHSNNKIMSSGAIAAMLSTILYSRRFFPYYVY 133

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+       L     V
Sbjct: 134 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVG------LKNMQGV 187

Query: 134 T--PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              PLS  +A+ LVK  F SA ERD+YTGD L+I V+ K GI  E   LR+D
Sbjct: 188 KQLPLSLEKALQLVKDVFISAAERDVYTGDALKICVITKDGIKEESFPLRRD 239


>gi|21465654|pdb|1IRU|M Chain M, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
           A Resolution
 gi|21465668|pdb|1IRU|1 Chain 1, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
           A Resolution
          Length = 213

 Score =  160 bits (404), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/170 (46%), Positives = 107/170 (62%), Gaps = 4/170 (2%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 48  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 107

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +   +      
Sbjct: 108 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEH---- 163

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            PLS   A+ LVK  F SA ERD+YTGD L I ++ K GI  E + LRKD
Sbjct: 164 VPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVSLRKD 213


>gi|225705074|gb|ACO08383.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
          Length = 237

 Score =  160 bits (404), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 81/172 (47%), Positives = 108/172 (62%), Gaps = 8/172 (4%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D  V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 72  DTTVIGCSGFHGDCLTLTKIIDARLKMYKHSNNKCMTSGAIAAMLSTILYGRRFFPYYVY 131

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  Y + GS S ++ P LDNQ+           + V
Sbjct: 132 NIIGGLDEEGKGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIG------FKNMEGV 185

Query: 134 T--PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              PLS+ +AV LVK  F SA ERD+YTGD L I ++ K GI  E + LRKD
Sbjct: 186 QHLPLSQEKAVQLVKDVFISAAERDVYTGDALRICIVTKDGIKEETVPLRKD 237


>gi|225704042|gb|ACO07867.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
          Length = 237

 Score =  160 bits (404), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 81/173 (46%), Positives = 108/173 (62%), Gaps = 8/173 (4%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            D  V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY 
Sbjct: 71  TDTTVIGCSGFHGDCLTLTKIIDARLKMYKHSNNKCMTSGAIAAMLSTILYGRRFFPYYV 130

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           +N++GGLD EGKG VY++D VGSY+R  Y + GS S ++ P LDNQ+           + 
Sbjct: 131 YNIIGGLDEEGKGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIG------FKNMEG 184

Query: 133 VT--PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           V   PLS+ +AV LVK  F SA ERD+YTGD L I ++ K GI  E + LRKD
Sbjct: 185 VQHLPLSQEKAVQLVKDVFISAAERDVYTGDALRICIVTKDGIKEETVPLRKD 237


>gi|51468069|ref|NP_001003889.1| proteasome subunit beta type-1 [Danio rerio]
 gi|49619079|gb|AAT68124.1| proteasome beta-subunit C5 [Danio rerio]
 gi|55715844|gb|AAH85580.1| Proteasome (prosome, macropain) subunit, beta type, 1 [Danio rerio]
 gi|182891728|gb|AAI65077.1| Psmb1 protein [Danio rerio]
          Length = 237

 Score =  160 bits (404), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 78/170 (45%), Positives = 112/170 (65%), Gaps = 4/170 (2%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D  V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 72  DTTVLGCSGFHGDCLTLTKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVY 131

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EG+G VY++D VGSY+R  Y + GS S ++ P LDNQ+   +   +   + V
Sbjct: 132 NIIGGLDEEGRGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKN---MENVEHV 188

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            PL++ +AV LVK  F SA ERD+YTGD L++ +++K GI  E + LRKD
Sbjct: 189 -PLTQEKAVQLVKDVFISAAERDVYTGDALKVCIVSKEGIKEEIVPLRKD 237


>gi|62897947|dbj|BAD96913.1| proteasome beta 1 subunit variant [Homo sapiens]
          Length = 241

 Score =  159 bits (403), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 80/171 (46%), Positives = 108/171 (63%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 76  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 135

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +      Q+  
Sbjct: 136 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVE 190

Query: 134 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PLS   A+ LVK  F SA ERD+YTGD L I ++ K GI  E + LRKD
Sbjct: 191 HVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVSLRKD 241


>gi|12653473|gb|AAH00508.1| Proteasome (prosome, macropain) subunit, beta type, 1 [Homo
           sapiens]
 gi|157928354|gb|ABW03473.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
           construct]
 gi|157928990|gb|ABW03780.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
           construct]
          Length = 241

 Score =  159 bits (403), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 80/171 (46%), Positives = 108/171 (63%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 76  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 135

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +      Q+  
Sbjct: 136 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVE 190

Query: 134 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PLS   A+ LVK  F SA ERD+YTGD L I ++ K GI  E + LRKD
Sbjct: 191 HVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVSLRKD 241


>gi|427787323|gb|JAA59113.1| Putative 20s proteasome regulatory subunit beta type psmb1/pre7
           [Rhipicephalus pulchellus]
          Length = 232

 Score =  159 bits (403), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 78/171 (45%), Positives = 108/171 (63%), Gaps = 4/171 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           +++CV+ S+G   D+    + L AR  +Y H+H+K MS P +AQL+   LY KRFFPYY 
Sbjct: 66  SNQCVLGSTGCWCDILTFTRFLEARMKMYLHEHHKLMSTPAVAQLIVTMLYNKRFFPYYI 125

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            N+L GLD EGKGC+Y YD VG  ERV Y + GS S L+ P LDNQ+   +   +  +  
Sbjct: 126 SNILAGLDEEGKGCIYCYDPVGHSERVQYRAGGSSSALLQPLLDNQIGFKNMENVKPE-- 183

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             P +   AV+++K  F SA ERDIYTGD + I +++K GI  + M LR+D
Sbjct: 184 --PPTRERAVNIIKDVFISAAERDIYTGDSVIIHIIDKDGIKEDKMPLRRD 232


>gi|119567808|gb|EAW47423.1| proteasome (prosome, macropain) subunit, beta type, 1, isoform
           CRA_d [Homo sapiens]
          Length = 205

 Score =  159 bits (403), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 80/171 (46%), Positives = 108/171 (63%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 40  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 99

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +      Q+  
Sbjct: 100 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVE 154

Query: 134 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PLS   A+ LVK  F SA ERD+YTGD L I ++ K GI  E + LRKD
Sbjct: 155 HVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVSLRKD 205


>gi|54696302|gb|AAV38523.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
           construct]
 gi|54696304|gb|AAV38524.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
           construct]
 gi|61367228|gb|AAX42969.1| proteasome subunit beta type 1 [synthetic construct]
 gi|61367236|gb|AAX42970.1| proteasome subunit beta type 1 [synthetic construct]
          Length = 242

 Score =  159 bits (403), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 80/171 (46%), Positives = 108/171 (63%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 76  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 135

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +      Q+  
Sbjct: 136 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVE 190

Query: 134 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PLS   A+ LVK  F SA ERD+YTGD L I ++ K GI  E + LRKD
Sbjct: 191 HVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVSLRKD 241


>gi|4506193|ref|NP_002784.1| proteasome subunit beta type-1 [Homo sapiens]
 gi|114610308|ref|XP_001140101.1| PREDICTED: proteasome subunit beta type-1 isoform 4 [Pan
           troglodytes]
 gi|332825501|ref|XP_003311646.1| PREDICTED: proteasome subunit beta type-1 [Pan troglodytes]
 gi|397502108|ref|XP_003821710.1| PREDICTED: proteasome subunit beta type-1 isoform 1 [Pan paniscus]
 gi|397502110|ref|XP_003821711.1| PREDICTED: proteasome subunit beta type-1 isoform 2 [Pan paniscus]
 gi|397502112|ref|XP_003821712.1| PREDICTED: proteasome subunit beta type-1 isoform 3 [Pan paniscus]
 gi|130853|sp|P20618.2|PSB1_HUMAN RecName: Full=Proteasome subunit beta type-1; AltName:
           Full=Macropain subunit C5; AltName: Full=Multicatalytic
           endopeptidase complex subunit C5; AltName:
           Full=Proteasome component C5; AltName: Full=Proteasome
           gamma chain; Flags: Precursor
 gi|220026|dbj|BAA00658.1| proteasome subunit C5 [Homo sapiens]
 gi|18088777|gb|AAH20807.1| Proteasome (prosome, macropain) subunit, beta type, 1 [Homo
           sapiens]
 gi|54696306|gb|AAV38525.1| proteasome (prosome, macropain) subunit, beta type, 1 [Homo
           sapiens]
 gi|61357229|gb|AAX41355.1| proteasome subunit beta type 1 [synthetic construct]
 gi|197692325|dbj|BAG70126.1| proteasome beta 1 subunit [Homo sapiens]
 gi|197692585|dbj|BAG70256.1| proteasome beta 1 subunit [Homo sapiens]
 gi|261860708|dbj|BAI46876.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
           construct]
 gi|410210668|gb|JAA02553.1| proteasome (prosome, macropain) subunit, beta type, 1 [Pan
           troglodytes]
 gi|410259166|gb|JAA17549.1| proteasome (prosome, macropain) subunit, beta type, 1 [Pan
           troglodytes]
 gi|410301642|gb|JAA29421.1| proteasome (prosome, macropain) subunit, beta type, 1 [Pan
           troglodytes]
 gi|410335833|gb|JAA36863.1| proteasome (prosome, macropain) subunit, beta type, 1 [Pan
           troglodytes]
          Length = 241

 Score =  159 bits (403), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 80/171 (46%), Positives = 108/171 (63%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 76  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 135

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +      Q+  
Sbjct: 136 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVE 190

Query: 134 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PLS   A+ LVK  F SA ERD+YTGD L I ++ K GI  E + LRKD
Sbjct: 191 HVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVSLRKD 241


>gi|45360639|ref|NP_988993.1| proteasome beta 1 subunit [Xenopus (Silurana) tropicalis]
 gi|38174388|gb|AAH61284.1| proteasome (prosome, macropain) subunit, beta type, 1 [Xenopus
           (Silurana) tropicalis]
 gi|89272031|emb|CAJ83174.1| proteasome (prosome macropain) subunit beta type 1 [Xenopus
           (Silurana) tropicalis]
          Length = 239

 Score =  159 bits (403), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 77/170 (45%), Positives = 108/170 (63%), Gaps = 4/170 (2%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D  V+  +GF AD   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 74  DNTVIGCTGFHADCLTLTKIIEARLKMYKHSNNKTMTSGAIAAMLSTILYSRRFFPYYVY 133

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  Y + GS S ++ P LDNQ+   +   +      
Sbjct: 134 NIIGGLDEEGKGAVYSFDPVGSYQRDAYKAGGSASAMLQPLLDNQIGYKNMQNVEQ---- 189

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            PL+  +A+ L+K  F SA ERD+YTGD L I ++ K GI  E + LRKD
Sbjct: 190 LPLTLEKALKLIKDVFISAAERDVYTGDALHISIVTKDGIREESVSLRKD 239


>gi|296199648|ref|XP_002747247.1| PREDICTED: proteasome subunit beta type-1-like [Callithrix jacchus]
          Length = 241

 Score =  159 bits (403), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 80/171 (46%), Positives = 108/171 (63%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 76  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 135

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +      Q+  
Sbjct: 136 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVE 190

Query: 134 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PLS   A+ LVK  F SA ERD+YTGD L I ++ K GI  E + LRKD
Sbjct: 191 HVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETLPLRKD 241


>gi|432114954|gb|ELK36597.1| Proteasome subunit beta type-1 [Myotis davidii]
          Length = 240

 Score =  159 bits (403), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 80/171 (46%), Positives = 108/171 (63%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 75  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 134

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +      Q+  
Sbjct: 135 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVE 189

Query: 134 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PLS   A+ LVK  F SA ERD+YTGD L I ++ K GI  E + LRKD
Sbjct: 190 HVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 240


>gi|402868791|ref|XP_003898471.1| PREDICTED: proteasome subunit beta type-1 [Papio anubis]
          Length = 241

 Score =  159 bits (403), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 80/171 (46%), Positives = 108/171 (63%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 76  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 135

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +      Q+  
Sbjct: 136 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVE 190

Query: 134 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PLS   A+ LVK  F SA ERD+YTGD L I ++ K GI  E + LRKD
Sbjct: 191 HVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETIPLRKD 241


>gi|209734840|gb|ACI68289.1| Proteasome subunit beta type-1-A [Salmo salar]
          Length = 237

 Score =  159 bits (403), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 81/172 (47%), Positives = 107/172 (62%), Gaps = 8/172 (4%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D  V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 72  DTTVIGCSGFHGDCLTLTKIIDARLKMYKHSNNKCMTSGAIAAMLSTILYGRRFFPYYVY 131

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  Y + GS S ++ P LDNQ+           + V
Sbjct: 132 NIIGGLDEEGKGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIG------FKNMEGV 185

Query: 134 T--PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              PLS+ +AV LVK  F SA ERD+YTGD L I ++ K GI  E   LRKD
Sbjct: 186 QHLPLSQEKAVQLVKDVFISAAERDVYTGDALRICIVTKDGIKEETFPLRKD 237


>gi|410960369|ref|XP_003986764.1| PREDICTED: proteasome subunit beta type-1 [Felis catus]
          Length = 241

 Score =  159 bits (402), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 80/171 (46%), Positives = 109/171 (63%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 76  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVY 135

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +      Q+  
Sbjct: 136 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVE 190

Query: 134 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PLS   A+ LVK  F SA ERD+YTGD L+I ++ K GI  E + LRKD
Sbjct: 191 HVPLSLDRAMRLVKDVFISAAERDVYTGDALKICIVTKEGIREETVPLRKD 241


>gi|351714661|gb|EHB17580.1| Proteasome subunit beta type-1 [Heterocephalus glaber]
          Length = 240

 Score =  159 bits (402), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 80/171 (46%), Positives = 108/171 (63%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 75  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 134

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +      Q+  
Sbjct: 135 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVE 189

Query: 134 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PLS   A+ LVK  F SA ERD+YTGD L I ++ K GI  E + LRKD
Sbjct: 190 HVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETIPLRKD 240


>gi|297678538|ref|XP_002817127.1| PREDICTED: proteasome subunit beta type-1-like [Pongo abelii]
 gi|297679681|ref|XP_002817653.1| PREDICTED: proteasome subunit beta type-1 isoform 1 [Pongo abelii]
          Length = 241

 Score =  159 bits (402), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 80/171 (46%), Positives = 108/171 (63%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 76  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 135

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +      Q+  
Sbjct: 136 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVE 190

Query: 134 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PLS   A+ LVK  F SA ERD+YTGD L I ++ K GI  E + LRKD
Sbjct: 191 HVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 241


>gi|73974057|ref|XP_532275.2| PREDICTED: proteasome subunit beta type-1 [Canis lupus familiaris]
          Length = 241

 Score =  159 bits (402), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 80/171 (46%), Positives = 108/171 (63%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 76  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVY 135

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +      Q+  
Sbjct: 136 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVE 190

Query: 134 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PLS   A+ LVK  F SA ERD+YTGD L I ++ K GI  E + LRKD
Sbjct: 191 HVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 241


>gi|332264007|ref|XP_003281040.1| PREDICTED: proteasome subunit beta type-1 [Nomascus leucogenys]
          Length = 241

 Score =  159 bits (402), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 80/171 (46%), Positives = 108/171 (63%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 76  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 135

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +      Q+  
Sbjct: 136 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVE 190

Query: 134 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PLS   A+ LVK  F SA ERD+YTGD L I ++ K GI  E + LRKD
Sbjct: 191 HVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 241


>gi|354486298|ref|XP_003505318.1| PREDICTED: proteasome subunit beta type-1-like [Cricetulus griseus]
          Length = 240

 Score =  159 bits (402), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 80/171 (46%), Positives = 108/171 (63%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 75  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 134

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +      Q+  
Sbjct: 135 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVE 189

Query: 134 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PLS   A+ LVK  F SA ERD+YTGD L I ++ K GI  E + LRKD
Sbjct: 190 HVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 240


>gi|403305890|ref|XP_003943482.1| PREDICTED: proteasome subunit beta type-1 [Saimiri boliviensis
           boliviensis]
          Length = 241

 Score =  159 bits (402), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 80/171 (46%), Positives = 108/171 (63%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 76  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 135

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +      Q+  
Sbjct: 136 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVE 190

Query: 134 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PLS   A+ LVK  F SA ERD+YTGD L I ++ K GI  E + LRKD
Sbjct: 191 HVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 241


>gi|384497220|gb|EIE87711.1| hypothetical protein RO3G_12422 [Rhizopus delemar RA 99-880]
          Length = 232

 Score =  159 bits (402), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 84/172 (48%), Positives = 111/172 (64%), Gaps = 5/172 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           ++  V+A +GF AD   L+K+L  R   Y+  H+K MSC  +AQ+LS TLY KRFFPYYS
Sbjct: 65  SETSVIAMNGFHADGLTLKKVLDQRLKWYKFSHDKDMSCTALAQMLSITLYQKRFFPYYS 124

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           F VLGG+D EGKG VY YDA+GSYER    + GS + LI PFLDNQ+   +   +  +D 
Sbjct: 125 FCVLGGVDEEGKGAVYCYDAIGSYEREKCRASGSAAALIQPFLDNQVSKKNMQNVSLED- 183

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG-IHREYMELRKD 183
              +   EA+ +VK  F SATERDIYTGD L+I ++ K   +  +   L+KD
Sbjct: 184 ---IELDEAIKVVKDAFTSATERDIYTGDNLQIFIIRKDQPVDVQIHPLKKD 232


>gi|225707182|gb|ACO09437.1| Proteasome subunit beta type 1-A [Osmerus mordax]
          Length = 237

 Score =  159 bits (402), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 79/171 (46%), Positives = 109/171 (63%), Gaps = 4/171 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            D  V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY 
Sbjct: 71  TDTTVIGCSGFHGDCPTLTKIIDARLKMYKHSNNKTMTSGAIAAMLSTILYGRRFFPYYV 130

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           +N++GGLD +G+G VY++D VGSY+R  Y + GS S ++ P LDNQ+   +  +   Q  
Sbjct: 131 YNIIGGLDEQGRGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKN--MENVQH- 187

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PLS+ +AV LVK  F SA ERD+YTGD L I ++ K GI  E + LRKD
Sbjct: 188 -LPLSQEKAVQLVKDVFISAAERDVYTGDALRICIITKEGIKEETVPLRKD 237


>gi|386781057|ref|NP_001247565.1| proteasome subunit beta type-1 [Macaca mulatta]
 gi|355562210|gb|EHH18842.1| hypothetical protein EGK_15528 [Macaca mulatta]
 gi|355749047|gb|EHH53530.1| hypothetical protein EGM_14190 [Macaca fascicularis]
 gi|380788877|gb|AFE66314.1| proteasome subunit beta type-1 [Macaca mulatta]
          Length = 241

 Score =  159 bits (402), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 80/171 (46%), Positives = 108/171 (63%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 76  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 135

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +      Q+  
Sbjct: 136 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVE 190

Query: 134 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PLS   A+ LVK  F SA ERD+YTGD L I ++ K GI  E + LRKD
Sbjct: 191 HVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 241


>gi|395738001|ref|XP_003777017.1| PREDICTED: proteasome subunit beta type-1 isoform 2 [Pongo abelii]
          Length = 205

 Score =  159 bits (402), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 80/171 (46%), Positives = 108/171 (63%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 40  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 99

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +      Q+  
Sbjct: 100 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVE 154

Query: 134 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PLS   A+ LVK  F SA ERD+YTGD L I ++ K GI  E + LRKD
Sbjct: 155 HVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 205


>gi|384944338|gb|AFI35774.1| proteasome subunit beta type-1 precursor [Macaca mulatta]
          Length = 241

 Score =  159 bits (402), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 80/171 (46%), Positives = 108/171 (63%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 76  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 135

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +      Q+  
Sbjct: 136 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVE 190

Query: 134 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PLS   A+ LVK  F SA ERD+YTGD L I ++ K GI  E + LRKD
Sbjct: 191 HVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 241


>gi|301779700|ref|XP_002925260.1| PREDICTED: proteasome subunit beta type-1-like [Ailuropoda
           melanoleuca]
 gi|281351745|gb|EFB27329.1| hypothetical protein PANDA_014727 [Ailuropoda melanoleuca]
          Length = 241

 Score =  159 bits (402), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 80/171 (46%), Positives = 108/171 (63%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 76  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVY 135

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +      Q+  
Sbjct: 136 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVE 190

Query: 134 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PLS   A+ LVK  F SA ERD+YTGD L I ++ K GI  E + LRKD
Sbjct: 191 HVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 241


>gi|149744029|ref|XP_001499422.1| PREDICTED: proteasome subunit beta type-1-like [Equus caballus]
          Length = 241

 Score =  159 bits (401), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 80/171 (46%), Positives = 108/171 (63%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 76  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 135

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +      Q+  
Sbjct: 136 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVE 190

Query: 134 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PLS   A+ LVK  F SA ERD+YTGD L I ++ K GI  E + LRKD
Sbjct: 191 HVPLSLDRAMGLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 241


>gi|348561415|ref|XP_003466508.1| PREDICTED: proteasome subunit beta type-1-like [Cavia porcellus]
          Length = 241

 Score =  159 bits (401), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 79/171 (46%), Positives = 109/171 (63%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+ V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 76  DRTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 135

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +      Q+  
Sbjct: 136 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVE 190

Query: 134 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PLS   A+ LVK  F SA ERD+YTGD L+I ++ K GI  E + LRKD
Sbjct: 191 HVPLSLDRAMRLVKDVFISAAERDVYTGDALKICIVTKDGIREETIPLRKD 241


>gi|296483812|tpg|DAA25927.1| TPA: proteasome beta 1 subunit precursor [Bos taurus]
          Length = 241

 Score =  159 bits (401), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 79/171 (46%), Positives = 109/171 (63%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 76  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 135

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +      Q+  
Sbjct: 136 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVE 190

Query: 134 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PLS   A+ LVK  F SA ERD+YTGD L++ ++ K GI  E + LRKD
Sbjct: 191 HVPLSLDRAMRLVKDVFISAAERDVYTGDALKVCIVTKEGIREETVPLRKD 241


>gi|225716016|gb|ACO13854.1| Proteasome subunit beta type-1-A [Esox lucius]
          Length = 237

 Score =  159 bits (401), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 79/172 (45%), Positives = 108/172 (62%), Gaps = 8/172 (4%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D  V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 72  DTTVIGCSGFHGDCLTLTKIIDARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVY 131

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EG+G VY++D VGSY+R  Y + GS S ++ P LDNQ+           + V
Sbjct: 132 NIIGGLDEEGRGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIG------FKNMEGV 185

Query: 134 T--PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              PLS+ +A+ LVK  F SA ERD+YTGD L I ++ K GI  E + LRKD
Sbjct: 186 QHLPLSQEKALQLVKDVFISAAERDVYTGDALRICIVTKDGIKEENVPLRKD 237


>gi|440894478|gb|ELR46920.1| Proteasome subunit beta type-1, partial [Bos grunniens mutus]
          Length = 241

 Score =  159 bits (401), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 79/171 (46%), Positives = 109/171 (63%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 76  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAVAAMLSTILYSRRFFPYYVY 135

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +      Q+  
Sbjct: 136 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVE 190

Query: 134 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PLS   A+ LVK  F SA ERD+YTGD L++ ++ K GI  E + LRKD
Sbjct: 191 HVPLSLDRAMRLVKDVFISAAERDVYTGDALKVCIVTKEGIREETVPLRKD 241


>gi|431904620|gb|ELK10002.1| Proteasome subunit beta type-1 [Pteropus alecto]
          Length = 241

 Score =  159 bits (401), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 79/171 (46%), Positives = 109/171 (63%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 76  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 135

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +      Q+  
Sbjct: 136 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVE 190

Query: 134 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PLS   A+ LVK  F SA ERD+YTGD L++ ++ K GI  E + LRKD
Sbjct: 191 HIPLSLDRAMRLVKDVFISAAERDVYTGDALKVCIVTKEGIREETIPLRKD 241


>gi|294940012|ref|XP_002782634.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
           50983]
 gi|239894486|gb|EER14429.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
           50983]
          Length = 241

 Score =  159 bits (401), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 79/170 (46%), Positives = 108/170 (63%), Gaps = 4/170 (2%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           ++CV+ +SG  AD   L K+L  R   Y H+H ++ +   +AQ+LSN LYYKRFFPYY+F
Sbjct: 76  ERCVITTSGMLADQITLHKVLKNRVARYVHEHRREPTVGAVAQMLSNILYYKRFFPYYTF 135

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++ G+D  GKG VY YDA+GS+E +   +QGSGS+L+   LDNQL      L   +   
Sbjct: 136 NMIAGIDENGKGKVYGYDAIGSFESIPCGAQGSGSSLVQSILDNQLTKAHQQLASHE--- 192

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             L+E + V+L K   ASATERDI+TGD   I  ++  GI  +  ELRKD
Sbjct: 193 -ALTEGQMVELCKDVIASATERDIHTGDSNTICTIDSTGIKMQTFELRKD 241


>gi|432852541|ref|XP_004067299.1| PREDICTED: proteasome subunit beta type-1-B-like [Oryzias latipes]
          Length = 237

 Score =  159 bits (401), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 78/170 (45%), Positives = 110/170 (64%), Gaps = 4/170 (2%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D  V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 72  DTTVLGCSGFHGDCLTLTKIIDARLKMYKHSNNKTMTSGAIAAMLSTILYSRRFFPYYVY 131

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD +GKG VY++D VGSY+R  Y + GS S ++ P LDNQ+   +   +   + V
Sbjct: 132 NIIGGLDEQGKGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKN---MEGVEHV 188

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            PL++ +AV LVK  F SA ERD+YTGD L I ++ K GI  + + LRKD
Sbjct: 189 -PLTKDKAVQLVKDVFVSAAERDVYTGDALRICIVTKEGIEEQNIPLRKD 237


>gi|346986249|ref|NP_001231282.1| proteasome subunit beta type-1 [Sus scrofa]
          Length = 241

 Score =  158 bits (400), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 79/171 (46%), Positives = 108/171 (63%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 76  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 135

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +      Q+  
Sbjct: 136 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVE 190

Query: 134 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PLS   A+ LVK  F SA ERD+YTGD L I ++ K G+  E + LRKD
Sbjct: 191 HVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGVREETVPLRKD 241


>gi|346472379|gb|AEO36034.1| hypothetical protein [Amblyomma maculatum]
          Length = 232

 Score =  158 bits (400), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 77/171 (45%), Positives = 109/171 (63%), Gaps = 4/171 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           +++CV+ S+G   D+    + L AR  +Y H+H++ MS P +AQL+   LY KRFFPYY 
Sbjct: 66  SNQCVLGSTGCWCDILTFTRFLEARMKMYLHEHHRLMSTPAVAQLVVTMLYNKRFFPYYI 125

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            N+L GLD +GKGC+Y YD VG  ERV Y + GS S L+ P LDNQ+   +   +   + 
Sbjct: 126 SNILAGLDEDGKGCIYCYDPVGHCERVQYRAGGSSSALLQPLLDNQIGFKN---MENVEL 182

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           V P  E  AV+++K  F S+ ERDIYTGD + I +++K GI  E + LR+D
Sbjct: 183 VPPTRE-RAVNIIKDVFISSAERDIYTGDSVVINIIDKNGIKEEMLALRRD 232


>gi|426235057|ref|XP_004011507.1| PREDICTED: proteasome subunit beta type-1 [Ovis aries]
          Length = 241

 Score =  158 bits (400), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 79/171 (46%), Positives = 108/171 (63%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 76  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 135

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +      Q+  
Sbjct: 136 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVE 190

Query: 134 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PLS   A+ LVK  F SA ERD+YTGD L + ++ K GI  E + LRKD
Sbjct: 191 HVPLSLDRAMRLVKDVFISAAERDVYTGDALRVCIVTKEGIREETVPLRKD 241


>gi|66512107|ref|XP_395163.2| PREDICTED: proteasome subunit beta type-1 [Apis mellifera]
          Length = 236

 Score =  158 bits (400), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 79/173 (45%), Positives = 105/173 (60%), Gaps = 8/173 (4%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           + K V+  SG   D   L ++L+AR  +Y+H+H K+M  P +AQ+LS  LYYKRFFPYY 
Sbjct: 70  SSKTVLGCSGCWCDTLTLTRILSARMQMYEHEHQKEMPTPAVAQMLSTMLYYKRFFPYYV 129

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            N+LGGLD  GKGCVY+YD +G  E   Y + GS   L+ P LDNQ+   +      Q+ 
Sbjct: 130 SNILGGLDENGKGCVYSYDPIGHCEITKYRAGGSAGALLQPLLDNQIGYKN------QEG 183

Query: 133 V--TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           V   PL++  AV ++K  F SA ERDIYTGD + I ++   GI      LRKD
Sbjct: 184 VESVPLTQERAVAIIKDVFTSAAERDIYTGDSIFIKIITSDGIQNFNFALRKD 236


>gi|7242197|ref|NP_035315.1| proteasome subunit beta type-1 precursor [Mus musculus]
 gi|2499837|sp|O09061.1|PSB1_MOUSE RecName: Full=Proteasome subunit beta type-1; AltName:
           Full=Macropain subunit C5; AltName: Full=Multicatalytic
           endopeptidase complex subunit C5; AltName:
           Full=Proteasome component C5; AltName: Full=Proteasome
           gamma chain; Flags: Precursor
 gi|1165122|emb|CAA56701.1| component C5 of proteasome [Mus musculus]
 gi|1698584|gb|AAB37251.1| proteasome beta-subunit C5 [Mus musculus]
 gi|17390820|gb|AAH18351.1| Proteasome (prosome, macropain) subunit, beta type 1 [Mus musculus]
 gi|26346380|dbj|BAC36841.1| unnamed protein product [Mus musculus]
 gi|39754751|gb|AAR30867.1| proteasome beta-subunit C5 [Mus musculus]
 gi|74198429|dbj|BAE39698.1| unnamed protein product [Mus musculus]
 gi|74205097|dbj|BAE21005.1| unnamed protein product [Mus musculus]
 gi|148688516|gb|EDL20463.1| proteasome (prosome, macropain) subunit, beta type 1 [Mus musculus]
          Length = 240

 Score =  158 bits (400), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 79/171 (46%), Positives = 108/171 (63%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 75  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 134

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +      Q+  
Sbjct: 135 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVE 189

Query: 134 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PL+   A+ LVK  F SA ERD+YTGD L I ++ K GI  E + LRKD
Sbjct: 190 HVPLTLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 240


>gi|378792314|pdb|3UNB|L Chain L, Mouse Constitutive 20s Proteasome In Complex With Pr-957
 gi|378792328|pdb|3UNB|Z Chain Z, Mouse Constitutive 20s Proteasome In Complex With Pr-957
 gi|378792342|pdb|3UNB|NN Chain n, Mouse Constitutive 20s Proteasome In Complex With Pr-957
 gi|378792356|pdb|3UNB|2 Chain 2, Mouse Constitutive 20s Proteasome In Complex With Pr-957
 gi|378792370|pdb|3UNE|L Chain L, Mouse Constitutive 20s Proteasome
 gi|378792384|pdb|3UNE|Z Chain Z, Mouse Constitutive 20s Proteasome
 gi|378792398|pdb|3UNE|NN Chain n, Mouse Constitutive 20s Proteasome
 gi|378792412|pdb|3UNE|2 Chain 2, Mouse Constitutive 20s Proteasome
 gi|378792426|pdb|3UNF|L Chain L, Mouse 20s Immunoproteasome In Complex With Pr-957
 gi|378792440|pdb|3UNF|Z Chain Z, Mouse 20s Immunoproteasome In Complex With Pr-957
 gi|378792454|pdb|3UNH|L Chain L, Mouse 20s Immunoproteasome
 gi|378792468|pdb|3UNH|Z Chain Z, Mouse 20s Immunoproteasome
          Length = 213

 Score =  158 bits (400), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 78/170 (45%), Positives = 107/170 (62%), Gaps = 4/170 (2%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 48  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 107

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +   +      
Sbjct: 108 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEH---- 163

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            PL+   A+ LVK  F SA ERD+YTGD L I ++ K GI  E + LRKD
Sbjct: 164 VPLTLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 213


>gi|380018248|ref|XP_003693045.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1-like
           [Apis florea]
          Length = 237

 Score =  158 bits (400), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 79/173 (45%), Positives = 105/173 (60%), Gaps = 8/173 (4%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           + K V+  SG   D   L ++L+AR  +Y+H+H K+M  P +AQ+LS  LYYKRFFPYY 
Sbjct: 71  SSKTVLGCSGCWCDTLTLTRILSARMQMYEHEHQKEMPTPAVAQMLSTMLYYKRFFPYYV 130

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            N+LGGLD  GKGCVY+YD +G  E   Y + GS   L+ P LDNQ+   +      Q+ 
Sbjct: 131 SNILGGLDENGKGCVYSYDPIGHCEITKYRAGGSAGALLQPLLDNQIGYKN------QEG 184

Query: 133 V--TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           V   PL++  AV ++K  F SA ERDIYTGD + I ++   GI      LRKD
Sbjct: 185 VEPVPLTQERAVAIIKDVFTSAAERDIYTGDSIFIKIITSDGIQNFSFALRKD 237


>gi|91092850|ref|XP_968855.1| PREDICTED: similar to proteasome beta subunit [Tribolium castaneum]
 gi|270003046|gb|EEZ99493.1| hypothetical protein TcasGA2_TC000069 [Tribolium castaneum]
          Length = 235

 Score =  158 bits (400), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 78/171 (45%), Positives = 107/171 (62%), Gaps = 4/171 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           +D  V+  SG   D   L ++L+AR  +YQ +HNK M+ P  AQ+LS  LYYKRFFPYY 
Sbjct: 69  SDTTVLGCSGCWCDTLTLTRILSARMQMYQQEHNKTMATPACAQMLSTMLYYKRFFPYYI 128

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            N+L GLDNEGKGC+Y+YD +G  E+  Y + GS   L+ P LDNQ+   +  +   +D+
Sbjct: 129 SNILVGLDNEGKGCIYSYDPIGHCEKTTYRAGGSAGALLQPLLDNQIGLKN--MQNVKDS 186

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              L  A A+  +K  F SA ERDI+TGD + I ++ K GI  +  +LRKD
Sbjct: 187 KLTLERAAAI--IKDVFISAAERDIFTGDNILINIITKDGIKEDSFQLRKD 235


>gi|225703280|gb|ACO07486.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
          Length = 237

 Score =  158 bits (400), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 80/172 (46%), Positives = 108/172 (62%), Gaps = 8/172 (4%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D  V+  SGF  D   L +++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 72  DTTVIGCSGFHGDCLTLTEIIDARLKMYKHSNNKCMTSGAIAAMLSTILYGRRFFPYYVY 131

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  Y + GS S ++ P LDNQ+           + V
Sbjct: 132 NIIGGLDEEGKGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIG------FKNMEGV 185

Query: 134 T--PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              PLS+ +AV LVK  F SA ERD+YTGD L I ++ K GI  E + LRKD
Sbjct: 186 QHLPLSQEKAVQLVKDVFISAAERDVYTGDALRICIVTKDGIKEETVPLRKD 237


>gi|294955484|ref|XP_002788528.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
           50983]
 gi|239904069|gb|EER20324.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
           50983]
          Length = 241

 Score =  158 bits (399), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 79/170 (46%), Positives = 108/170 (63%), Gaps = 4/170 (2%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           ++CV+ +SG  AD   L K+L  R   Y H+H ++ +   +AQ+LSN LYYKRFFPYY+F
Sbjct: 76  ERCVITTSGMLADQITLHKVLKNRVARYVHEHRREPTVGAVAQMLSNILYYKRFFPYYTF 135

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++ G+D  GKG VY YDA+GS+E +   +QGSGS+L+   LDNQL      L   +   
Sbjct: 136 NMIAGIDENGKGKVYGYDAIGSFESIPCGAQGSGSSLVQSILDNQLTKAHQQLASHE--- 192

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             L+E + V+L K   ASATERDI+TGD   I  ++  GI  +  ELRKD
Sbjct: 193 -ALTEGQMVELCKDVIASATERDIHTGDSNTICTIDSTGIKIQTFELRKD 241


>gi|37231712|gb|AAH58455.1| Proteasome (prosome, macropain) subunit, beta type 1 [Rattus
           norvegicus]
 gi|149047099|gb|EDL99819.1| proteasome (prosome, macropain) subunit, beta type 1, isoform CRA_a
           [Rattus norvegicus]
          Length = 240

 Score =  158 bits (399), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 79/171 (46%), Positives = 108/171 (63%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 75  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 134

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +      Q+  
Sbjct: 135 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVE 189

Query: 134 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PL+   A+ LVK  F SA ERD+YTGD L I ++ K GI  E + LRKD
Sbjct: 190 HVPLTLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 240


>gi|56118302|ref|NP_001007906.1| proteasome subunit beta type-1 [Gallus gallus]
 gi|38680347|gb|AAR26544.1| proteasome subunit beta-type [Gallus gallus]
          Length = 237

 Score =  158 bits (399), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 78/171 (45%), Positives = 111/171 (64%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           ++ V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 72  EQTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVY 131

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +      Q+  
Sbjct: 132 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQIGFKN-----MQNVE 186

Query: 134 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PL+  +A+ LVK  F SA ERD+YTGD L+I V+ K GI  E ++LRKD
Sbjct: 187 HVPLTLEKALQLVKDVFISAAERDVYTGDALKICVVTKDGIKEETIQLRKD 237


>gi|1165123|emb|CAA56702.1| component C5 of proteasome [Mus musculus]
          Length = 225

 Score =  158 bits (399), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 79/171 (46%), Positives = 108/171 (63%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 60  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 119

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +      Q+  
Sbjct: 120 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVE 174

Query: 134 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PL+   A+ LVK  F SA ERD+YTGD L I ++ K GI  E + LRKD
Sbjct: 175 HVPLTLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 225


>gi|417397679|gb|JAA45873.1| Putative 20s proteasome regulatory subunit beta type psmb1/pre7
           [Desmodus rotundus]
          Length = 240

 Score =  158 bits (399), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 78/171 (45%), Positives = 109/171 (63%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 75  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 134

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +      Q+  
Sbjct: 135 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVE 189

Query: 134 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PL+   A+ LVK  F SA ERD+YTGD L+I ++ K GI  E + LR+D
Sbjct: 190 HVPLTLDRAMRLVKDVFISAAERDVYTGDTLKICIVTKDGIREETVPLRRD 240


>gi|84370111|ref|NP_001033628.1| proteasome subunit beta type-1 precursor [Bos taurus]
 gi|108860905|sp|Q2TBX6.1|PSB1_BOVIN RecName: Full=Proteasome subunit beta type-1; Flags: Precursor
 gi|83638719|gb|AAI09495.1| Proteasome (prosome, macropain) subunit, beta type, 1 [Bos taurus]
          Length = 241

 Score =  158 bits (399), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 79/171 (46%), Positives = 109/171 (63%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 76  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 135

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +      Q+  
Sbjct: 136 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVE 190

Query: 134 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PLS   A+ LVK  F SA ERD+YTGD L++ ++ K GI  E + LRKD
Sbjct: 191 HVPLSLDRAMRLVKDVFISAAERDVYTGDALKVCIVTKEGIRGETVPLRKD 241


>gi|209732446|gb|ACI67092.1| Proteasome subunit beta type-1-A [Salmo salar]
          Length = 237

 Score =  158 bits (399), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 79/173 (45%), Positives = 108/173 (62%), Gaps = 8/173 (4%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            +  V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY 
Sbjct: 71  TNTTVIGCSGFHGDCLTLTKIIDARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYV 130

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           +N++GGLD EGKG VY++D VGSY+R  Y + GS S ++ P LDNQ+           + 
Sbjct: 131 YNIIGGLDEEGKGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIG------FKNMEG 184

Query: 133 VT--PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           V   PL++ +AV LVK  F SA ERD+YTGD L I ++ K GI  E + LRKD
Sbjct: 185 VQHLPLNQEKAVQLVKDVFISAAERDVYTGDALRICIVTKEGIKEETVPLRKD 237


>gi|449278062|gb|EMC86029.1| Proteasome subunit beta type-1 [Columba livia]
          Length = 237

 Score =  158 bits (399), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 77/171 (45%), Positives = 111/171 (64%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           ++ V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 72  ERTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVY 131

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +      Q+  
Sbjct: 132 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAAGSASAMLQPLLDNQIGFKN-----MQNVE 186

Query: 134 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PL+  +A+ LVK  F SA ERD+YTGD L+I ++ K GI  E ++LRKD
Sbjct: 187 HLPLTLEKALQLVKDVFISAAERDVYTGDALKICIVTKDGIKEETVQLRKD 237


>gi|307170452|gb|EFN62722.1| Proteasome subunit beta type-1 [Camponotus floridanus]
          Length = 236

 Score =  158 bits (399), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 77/173 (44%), Positives = 108/173 (62%), Gaps = 8/173 (4%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           ++  ++  SG   D   L +LL+AR  +Y+H+H K+M+ P  AQ+LS  LY+KRFFPYY 
Sbjct: 70  SNTTILGCSGCWCDTLTLTRLLSARMQMYKHEHQKEMTTPAAAQMLSIMLYHKRFFPYYV 129

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            N+L GLD  GKGC+Y+YD +G  E+  Y + GS   L+ P LDNQ+   +      Q+ 
Sbjct: 130 SNILAGLDENGKGCIYSYDPIGHCEKTTYRAGGSAGALLQPLLDNQIGYKN------QEG 183

Query: 133 VTP--LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           VTP  L++ +AV ++K  F SA ERDIYTGD + I ++ K GI      LRKD
Sbjct: 184 VTPAVLTQEKAVAILKDVFTSAAERDIYTGDGISIKIITKDGIKDSSFALRKD 236


>gi|350539311|ref|NP_001232140.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
 gi|197129774|gb|ACH46272.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
 gi|197129776|gb|ACH46274.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
 gi|197129778|gb|ACH46276.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
 gi|197129780|gb|ACH46278.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
 gi|197129781|gb|ACH46279.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
 gi|197129782|gb|ACH46280.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
 gi|197129783|gb|ACH46281.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
          Length = 238

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 76/170 (44%), Positives = 112/170 (65%), Gaps = 4/170 (2%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           ++ V+  +GF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 73  ERTVIGCTGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVY 132

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSYER  + + GS S ++ P LDNQ+   +   +   + V
Sbjct: 133 NIIGGLDEEGKGAVYSFDPVGSYERDNFKAGGSASAMLQPLLDNQIGFKN---MQNVEHV 189

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            PL+  +A+ LVK  F SA ERD+YTGD L+I ++ K GI  + ++LRKD
Sbjct: 190 -PLTLEKALQLVKDVFISAAERDVYTGDALKICIVTKDGIKEQTIQLRKD 238


>gi|197129773|gb|ACH46271.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
          Length = 238

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 76/170 (44%), Positives = 112/170 (65%), Gaps = 4/170 (2%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           ++ V+  +GF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 73  ERTVIGCTGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVY 132

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSYER  + + GS S ++ P LDNQ+   +   +   + V
Sbjct: 133 NIIGGLDEEGKGAVYSFDPVGSYERDNFKAGGSASAMLQPLLDNQIGFKN---MQNVEHV 189

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            PL+  +A+ LVK  F SA ERD+YTGD L+I ++ K GI  + ++LRKD
Sbjct: 190 -PLTLEKALQLVKDVFISAAERDVYTGDALKICIVTKDGIKEQTIQLRKD 238


>gi|197129784|gb|ACH46282.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
          Length = 238

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 76/170 (44%), Positives = 112/170 (65%), Gaps = 4/170 (2%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           ++ V+  +GF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 73  ERTVIGCTGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVY 132

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSYER  + + GS S ++ P LDNQ+   +   +   + V
Sbjct: 133 NIIGGLDEEGKGAVYSFDPVGSYERDNFKAGGSASAMLQPLLDNQIGFKN---MQNVEHV 189

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            PL+  +A+ LVK  F SA ERD+YTGD L+I ++ K GI  + ++LRKD
Sbjct: 190 -PLTLEKALQLVKDVFISAAERDVYTGDALKICIVTKDGIKEQTIQLRKD 238


>gi|198424168|ref|XP_002121356.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
          Length = 229

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 79/167 (47%), Positives = 106/167 (63%), Gaps = 5/167 (2%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V+A SGF+ D   L+K +  R  +Y+H H K  S   +A ++S  LYYKRFFPYY +N++
Sbjct: 68  VLAQSGFEGDSLTLKKHVQMRIGMYEHNHGKTPSTSAIAAMISKMLYYKRFFPYYVYNIV 127

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPL 136
            GLDNEGKGCVY+YD VGSYER  Y + G+ + L+ P LDNQ+   +       +A  PL
Sbjct: 128 AGLDNEGKGCVYSYDPVGSYEREQYRAAGAANELLQPLLDNQIGFKN-----MSEAGPPL 182

Query: 137 SEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           S+  AV L   CF SA ERDI TGD + I V++K G+  +   LR+D
Sbjct: 183 SKERAVQLCIDCFISAAERDITTGDCVLIQVIDKDGVETKKFPLRRD 229


>gi|322796740|gb|EFZ19173.1| hypothetical protein SINV_12036 [Solenopsis invicta]
          Length = 237

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 77/173 (44%), Positives = 108/173 (62%), Gaps = 8/173 (4%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           ++  ++  SG   D   L +LL+AR  +Y+H+H K+MS P  AQ+LS  LY+KRFFPYY 
Sbjct: 71  SNTTILGCSGCWCDTLTLTRLLSARMQMYKHEHQKEMSTPAAAQMLSIMLYHKRFFPYYV 130

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            N+L GLD  GKGC+Y+YD +G  E+  Y + GS   L+ P LDNQ+   +      Q+ 
Sbjct: 131 SNILAGLDENGKGCIYSYDPIGHCEKTTYRAGGSAGALLQPLLDNQIGYKN------QEG 184

Query: 133 V--TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           V  TP+++ +AV ++K  F SA ERDIYTGD + I ++ K GI      LRKD
Sbjct: 185 VTPTPVTQEKAVAILKDVFTSAAERDIYTGDGITIKIITKDGIKDSSFALRKD 237


>gi|390364342|ref|XP_001187732.2| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1-like
           [Strongylocentrotus purpuratus]
          Length = 229

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 79/161 (49%), Positives = 105/161 (65%), Gaps = 8/161 (4%)

Query: 25  ADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGK 84
           +D  +L K+L AR  +Y+H+H+K+MS   +A +LS  LYY+RFFPYY++N+L GLD EGK
Sbjct: 75  SDWPSLTKVLTARLKMYEHEHHKKMSTTAIAAMLSTILYYRRFFPYYTYNILAGLDEEGK 134

Query: 85  GCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT--PLSEAEAV 142
           GCVY++D VGSYER  Y + GS S L+ P LDNQ+   +      Q+     P+   +AV
Sbjct: 135 GCVYSFDPVGSYERETYRAAGSSSALLQPLLDNQIGGKN------QEGWVKEPIPVDKAV 188

Query: 143 DLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            LVK  F SA ERDIYTGD + + VL K G   E   LR+D
Sbjct: 189 ALVKDVFISAAERDIYTGDGIVLHVLTKDGCKEERFPLRRD 229


>gi|326915585|ref|XP_003204095.1| PREDICTED: proteasome subunit beta type-1-like [Meleagris
           gallopavo]
          Length = 237

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 78/171 (45%), Positives = 110/171 (64%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           +  V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 72  EHTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVY 131

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +      Q+  
Sbjct: 132 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQIGFKN-----MQNVE 186

Query: 134 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PL+  +A+ LVK  F SA ERD+YTGD L+I V+ K GI  E ++LRKD
Sbjct: 187 HVPLTLEKALQLVKDVFISAAERDVYTGDALKICVVTKDGIKEETIQLRKD 237


>gi|225705308|gb|ACO08500.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
          Length = 236

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 79/173 (45%), Positives = 107/173 (61%), Gaps = 8/173 (4%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            +  V+  SGF  D   L K++ AR  +Y+H +NK M+   +A  LS  LY +RFFPYY 
Sbjct: 70  TNTTVIGCSGFHGDCLTLTKIIDARLKMYKHSNNKSMTSGAIAATLSTILYGRRFFPYYV 129

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           +N++GGLD EGKG VY++D VGSY+R  Y + GS S ++ P LDNQ+           + 
Sbjct: 130 YNIIGGLDEEGKGAVYSFDPVGSYQRGTYKAGGSASAMLQPLLDNQIG------FKNMEG 183

Query: 133 VT--PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           V   PL++ +AV LVK  F SA ERD+YTGD L I ++ K GI  E + LRKD
Sbjct: 184 VQHLPLNQEKAVQLVKDVFISAAERDVYTGDALRICIVTKEGIKEETVPLRKD 236


>gi|291414594|ref|XP_002723544.1| PREDICTED: proteasome beta 1 subunit [Oryctolagus cuniculus]
          Length = 241

 Score =  157 bits (396), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 78/171 (45%), Positives = 108/171 (63%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+ V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 76  DRTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 135

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +      Q+  
Sbjct: 136 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVE 190

Query: 134 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PL+   A+ LVK  F SA ERD+YTGD L I ++ K GI  E + LRKD
Sbjct: 191 HIPLTLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 241


>gi|71725697|gb|AAZ38994.1| proteasome-like protein [Oxyuranus scutellatus]
          Length = 174

 Score =  157 bits (396), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 81/171 (47%), Positives = 106/171 (61%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D  V+  SGF  D   L  +L AR  +Y+H +NK MS   +A +LS  LY +RFFPYY +
Sbjct: 9   DTTVIGCSGFHGDCLTLTTILEARLKMYKHSNNKIMSSGAIAAMLSTILYSRRFFPYYVY 68

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+      L   Q A 
Sbjct: 69  NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVG-----LKNMQGAR 123

Query: 134 T-PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PLS  +A+ LVK  F SA ERD+YTGD LE  ++ K GI  E   LR+D
Sbjct: 124 QLPLSLEKALQLVKDVFISAAERDVYTGDALETCIITKDGIKEESFPLRRD 174


>gi|395839143|ref|XP_003792460.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1
           [Otolemur garnettii]
          Length = 343

 Score =  157 bits (396), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 78/171 (45%), Positives = 107/171 (62%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 178 DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 237

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+          Q+  
Sbjct: 238 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVG-----FKNMQNVE 292

Query: 134 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PLS   A+ LVK  F SA ERD+YTGD L+I ++ + G   E + LRKD
Sbjct: 293 HVPLSLDRAMRLVKDVFISAAERDVYTGDALKICIVTRDGTREETIPLRKD 343


>gi|145483595|ref|XP_001427820.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|145552816|ref|XP_001462083.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124394903|emb|CAK60422.1| unnamed protein product [Paramecium tetraurelia]
 gi|124429921|emb|CAK94710.1| unnamed protein product [Paramecium tetraurelia]
          Length = 239

 Score =  156 bits (395), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 77/170 (45%), Positives = 107/170 (62%), Gaps = 5/170 (2%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DKCV+A++G  AD  AL+K L  R  +Y+ Q+  Q S   +A LLS  LY +RFFPYY+F
Sbjct: 75  DKCVLATAGQYADFIALRKFLQQRLQLYEFQNEVQASTETVAHLLSRELYSRRFFPYYTF 134

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N+L GLD    G VY YDA+GSY+++ Y  QGSG  L++  LDNQLK  + +     +  
Sbjct: 135 NLLAGLDENNHGVVYGYDAIGSYDQMTYGVQGSGQELVVAVLDNQLKGYNKI-----NKT 189

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            P +  E +D++  CF+ A ERDI+TGD +EI+++   G  R    LRKD
Sbjct: 190 IPQTREEILDIILDCFSCAAERDIHTGDNVEILIITAAGTERIVKPLRKD 239


>gi|145520811|ref|XP_001446261.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124413738|emb|CAK78864.1| unnamed protein product [Paramecium tetraurelia]
          Length = 239

 Score =  156 bits (395), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 78/171 (45%), Positives = 108/171 (63%), Gaps = 5/171 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            DKCV+A++G  AD  AL+K L  R  +Y+ Q+  Q S   +A LLS  LY +RFFPYY+
Sbjct: 74  TDKCVLATAGQYADFIALRKFLQQRLQLYEFQNEVQASTQTVAHLLSRELYSRRFFPYYT 133

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FN+L GLD    G VY YDA+GSY+++ Y  QGSG  L++  LDNQLK  + +     + 
Sbjct: 134 FNLLAGLDENNHGVVYGYDAIGSYDQMTYGVQGSGQELVVAVLDNQLKGYNKI-----NK 188

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             P ++ E +DL+  CF+ A ERDI+TGD +EI+++   G  R    LRKD
Sbjct: 189 TFPQTQQEILDLILDCFSCAAERDIHTGDNVEILIITPTGTERIVKPLRKD 239


>gi|229367074|gb|ACQ58517.1| Proteasome subunit beta type-1-A [Anoplopoma fimbria]
          Length = 237

 Score =  156 bits (395), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 77/172 (44%), Positives = 107/172 (62%), Gaps = 8/172 (4%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D  V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 72  DTTVIGCSGFHGDCLTLTKIIDARLKMYKHSNNKTMTSNAIAAMLSTILYGRRFFPYYVY 131

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD  GKG VY++D VGSY+R  Y + GS S ++ P LDNQ+           + V
Sbjct: 132 NIIGGLDEHGKGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIG------FKNMEGV 185

Query: 134 --TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              PL++ +AV LVK  F SA ERD+YTGD L + ++ K GI  + + LRKD
Sbjct: 186 QHVPLTQDKAVQLVKDVFISAAERDVYTGDALRVCIITKEGISEQTVPLRKD 237


>gi|229367266|gb|ACQ58613.1| Proteasome subunit beta type-1-A [Anoplopoma fimbria]
          Length = 237

 Score =  156 bits (394), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 77/172 (44%), Positives = 107/172 (62%), Gaps = 8/172 (4%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D  V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 72  DTTVIGCSGFHGDCLTLTKIIDARLKMYKHSNNKTMTSNAIAAMLSTILYGRRFFPYYVY 131

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD  GKG VY++D VGSY+R  Y + GS S ++ P LDNQ+           + V
Sbjct: 132 NIIGGLDEHGKGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIG------FKNMEGV 185

Query: 134 --TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              PL++ +AV LVK  F SA ERD+YTGD L + ++ K GI  + + LRKD
Sbjct: 186 QHVPLTQDKAVQLVKDVFISAAERDVYTGDALRVCIITKEGISEQTVPLRKD 237


>gi|348674011|gb|EGZ13830.1| hypothetical protein PHYSODRAFT_286698 [Phytophthora sojae]
          Length = 247

 Score =  156 bits (394), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 78/167 (46%), Positives = 105/167 (62%), Gaps = 5/167 (2%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V+   G   D+  L+ +L+ R  +YQH +   MS   MAQLL NTLY +RFFPYY+F +L
Sbjct: 86  VLGCPGSHNDIIQLRGVLSIRAQMYQHDNETAMSSSAMAQLLMNTLYSRRFFPYYAFCIL 145

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPL 136
            G+D  GKG VYTYDA+GSY+RV  ++QGSG  L++P LDN ++  +       D    L
Sbjct: 146 CGIDENGKGAVYTYDAIGSYDRVTRAAQGSGGHLMIPLLDNLVEHDT-----RTDPKKTL 200

Query: 137 SEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           S  E  D++K  F +A ERDIYTGD +EI+ +   GI RE   L+KD
Sbjct: 201 SLQETKDIIKDAFITAGERDIYTGDSVEILTIKASGIAREVFALKKD 247


>gi|294942317|ref|XP_002783482.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
           50983]
 gi|239895942|gb|EER15278.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
           50983]
          Length = 242

 Score =  156 bits (394), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 77/171 (45%), Positives = 108/171 (63%), Gaps = 4/171 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            ++CV+ +SG  AD   L K+L  R   Y H+H ++ +   +AQ+LSN LYYKRFFPYY+
Sbjct: 76  TERCVITTSGMLADQITLHKVLKNRVARYVHEHRREPTIGAVAQMLSNILYYKRFFPYYT 135

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FN++ G+D  G+G VY YDA+GS+E +   +QGSGS+L+   LDNQL      L   +  
Sbjct: 136 FNMIAGIDENGQGKVYGYDAIGSFESIPCGAQGSGSSLVQSILDNQLTKAHQQLASHE-- 193

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              L+E + V+L K   ASATERDI+TGD   +  ++  GI  +  ELRKD
Sbjct: 194 --ALTEGQMVELCKDVIASATERDIHTGDSNTVCTIDTTGIKIQTFELRKD 242


>gi|344306709|ref|XP_003422027.1| PREDICTED: hypothetical protein LOC100675710 [Loxodonta africana]
          Length = 560

 Score =  155 bits (393), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 76/171 (44%), Positives = 108/171 (63%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 395 DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 454

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +      Q+  
Sbjct: 455 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVE 509

Query: 134 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PLS   A+ LV+  F SA ERD+YTGD L I ++ + G+  E + LR+D
Sbjct: 510 HVPLSLDRALRLVRDVFISAAERDVYTGDALRICIVTQEGVREETLPLRRD 560


>gi|156547425|ref|XP_001605493.1| PREDICTED: proteasome subunit beta type-1-like isoform 1 [Nasonia
           vitripennis]
 gi|345484470|ref|XP_003425047.1| PREDICTED: proteasome subunit beta type-1-like isoform 2 [Nasonia
           vitripennis]
          Length = 236

 Score =  155 bits (392), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 78/171 (45%), Positives = 106/171 (61%), Gaps = 4/171 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           ++  V+  SG   D+  L +++AAR  +Y+H+H+K MS P  AQ+LS  LYYKRFFPYY 
Sbjct: 70  SETSVLGCSGCWCDILTLTRVMAARMQMYKHEHHKTMSTPAAAQMLSTMLYYKRFFPYYI 129

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            N+L GLD EGKG +Y YD VG  E+  Y + GS   L+ P LDNQ+      L      
Sbjct: 130 NNILAGLDEEGKGVIYRYDPVGHCEKNTYVAGGSAGALLQPLLDNQVG----YLNQENVE 185

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PL++ +A+ +VK  F SA ERDIYTGD + I ++ K GI  E  +LR+D
Sbjct: 186 KIPLTKEKALSIVKDVFISAAERDIYTGDGINIKIITKDGIVDETFDLRRD 236


>gi|16758370|ref|NP_446042.1| proteasome subunit beta type-1 precursor [Rattus norvegicus]
 gi|130854|sp|P18421.3|PSB1_RAT RecName: Full=Proteasome subunit beta type-1; AltName:
           Full=Macropain subunit C5; AltName: Full=Multicatalytic
           endopeptidase complex subunit C5; AltName:
           Full=Proteasome component C5; AltName: Full=Proteasome
           gamma chain; Flags: Precursor
 gi|56998|emb|CAA36987.1| proteasome subunit RC5 [Rattus norvegicus]
          Length = 240

 Score =  155 bits (392), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 78/171 (45%), Positives = 107/171 (62%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 75  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 134

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++ GLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+   +      Q+  
Sbjct: 135 NIIEGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN-----MQNVE 189

Query: 134 -TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PL+   A+ LVK  F SA ERD+YTGD L I ++ K GI  E + LRKD
Sbjct: 190 HVPLTLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 240


>gi|67475302|ref|XP_653346.1| proteasome beta subunit [Entamoeba histolytica HM-1:IMSS]
 gi|56470287|gb|EAL47959.1| proteasome beta subunit, putative [Entamoeba histolytica HM-1:IMSS]
          Length = 226

 Score =  155 bits (391), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 81/174 (46%), Positives = 107/174 (61%), Gaps = 14/174 (8%)

Query: 3   SFFYILTSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTL 62
           S  Y LTS    KCV   SG +AD+K L   + A    Y++++ K+MS   +AQ+LSNTL
Sbjct: 60  SKIYPLTS----KCVFTGSGMRADIKELTDQIKAHIKNYKYENGKEMSTESVAQVLSNTL 115

Query: 63  YYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSP 122
           Y  RFFPYYSF++L G++++GK   Y YDAVGS+E   YS  GSG  L  P LD+ LK  
Sbjct: 116 YSHRFFPYYSFSLLAGINSKGKAVTYNYDAVGSFEERKYSCSGSGEELAYPLLDSLLK-- 173

Query: 123 SPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHRE 176
                   D   PL E EA+++ +    SA ERDI+TGD +EIV+LN  GI +E
Sbjct: 174 --------DRTEPLGEQEAINIARDVMTSACERDIHTGDNVEIVILNSNGIRKE 219


>gi|449704101|gb|EMD44406.1| proteasome beta subunit, putative [Entamoeba histolytica KU27]
          Length = 225

 Score =  155 bits (391), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 81/174 (46%), Positives = 107/174 (61%), Gaps = 14/174 (8%)

Query: 3   SFFYILTSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTL 62
           S  Y LTS    KCV   SG +AD+K L   + A    Y++++ K+MS   +AQ+LSNTL
Sbjct: 59  SKIYPLTS----KCVFTGSGMRADIKELTDQIKAHIKNYKYENGKEMSTESVAQVLSNTL 114

Query: 63  YYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSP 122
           Y  RFFPYYSF++L G++++GK   Y YDAVGS+E   YS  GSG  L  P LD+ LK  
Sbjct: 115 YSHRFFPYYSFSLLAGINSKGKAVTYNYDAVGSFEERKYSCSGSGEELAYPLLDSLLK-- 172

Query: 123 SPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHRE 176
                   D   PL E EA+++ +    SA ERDI+TGD +EIV+LN  GI +E
Sbjct: 173 --------DRTEPLGEQEAINIARDVMTSACERDIHTGDNVEIVILNSNGIRKE 218


>gi|157119738|ref|XP_001659482.1| proteasome subunit beta type [Aedes aegypti]
 gi|108875198|gb|EAT39423.1| AAEL008770-PA [Aedes aegypti]
          Length = 231

 Score =  155 bits (391), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 76/171 (44%), Positives = 109/171 (63%), Gaps = 4/171 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           +D+ V+AS+G   D  AL  L+  R  +Y+ QH K M+ P +AQ+LS  +Y +RFFPYY 
Sbjct: 65  SDRTVLASTGCWCDTLALTSLVKVRMQMYKDQHQKNMTTPAVAQMLSILMYNRRFFPYYV 124

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            NVL GLD +GKG +Y+YD +G  E+  Y + GS   L+ P LDNQ+   + + +    A
Sbjct: 125 SNVLAGLDADGKGVIYSYDPIGHCEKTTYRAGGSAGPLLQPVLDNQIGLKNMVNV----A 180

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            TP+   +A+ ++K  F SATERDIYTGD + I ++ K GI  E ++LRKD
Sbjct: 181 PTPVQLDKAISIIKDTFISATERDIYTGDSVIINIITKDGIKEEIVQLRKD 231


>gi|327262119|ref|XP_003215873.1| PREDICTED: proteasome subunit beta type-1-like [Anolis
           carolinensis]
          Length = 239

 Score =  154 bits (390), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 78/171 (45%), Positives = 108/171 (63%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D  V+  SGF  D   L K++ AR  +Y+H +NK MS   +A +LS  LY +RFFPYY +
Sbjct: 74  DTTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKIMSAGAIAAMLSTILYSRRFFPYYVY 133

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA- 132
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDNQ+      L   Q+  
Sbjct: 134 NIIGGLDEEGKGAVYSFDPVGSYQRDTFKAGGSASAMLQPLLDNQVG-----LKNMQNVQ 188

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              L+  +A+ LVK  F SA ERD+YTGD L+I ++ K GI  E + LR+D
Sbjct: 189 QVSLTLEKALQLVKDVFISAAERDVYTGDALKICIITKDGIKEETVPLRRD 239


>gi|225703310|gb|ACO07501.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
          Length = 237

 Score =  154 bits (390), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 79/172 (45%), Positives = 106/172 (61%), Gaps = 8/172 (4%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D  V+  SG   D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 72  DTTVIGCSGSHGDCLTLTKIIDARLKMYKHSNNKCMTSGAIAAMLSTILYGRRFFPYYVY 131

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VG Y+R  Y + GS S ++ P LDNQ+           + V
Sbjct: 132 NIIGGLDEEGKGAVYSFDPVGPYQRDTYKAGGSASAMLQPLLDNQIG------FKNMEGV 185

Query: 134 T--PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              PLS+ +AV LVK  F SA ERD+YTGD L I ++ K GI  E + LRKD
Sbjct: 186 QHLPLSQEKAVQLVKDVFISAAERDVYTGDALRICIVTKDGIKEETVPLRKD 237


>gi|158293754|ref|XP_315096.4| AGAP004991-PA [Anopheles gambiae str. PEST]
 gi|157016597|gb|EAA10482.4| AGAP004991-PA [Anopheles gambiae str. PEST]
          Length = 231

 Score =  154 bits (390), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 78/171 (45%), Positives = 105/171 (61%), Gaps = 4/171 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           +DK V+AS+G   D  AL  L+  R  +Y+ QH K MS P +AQ+LS  +Y +RFFPYY 
Sbjct: 65  SDKTVLASTGCWCDTLALTSLVKVRMQMYKDQHQKNMSTPAVAQMLSILMYNRRFFPYYV 124

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            NVL GLD +GKG VY+YD +G  E   Y + GS   L+ P LDNQ+   + L    +  
Sbjct: 125 SNVLAGLDQDGKGVVYSYDPIGHCEMTTYRAGGSAGPLLQPVLDNQIGQKNMLNADPE-- 182

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             P+   +A+ ++K  F SATERDIYTGD + I ++ K GI  E + LRKD
Sbjct: 183 --PVKMEKAISIIKDTFISATERDIYTGDSVIINIITKDGIKEETLHLRKD 231


>gi|291230976|ref|XP_002735446.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
          Length = 180

 Score =  154 bits (390), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 74/146 (50%), Positives = 98/146 (67%), Gaps = 8/146 (5%)

Query: 40  IYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERV 99
           +Y++ H+K+MSCP +A ++S  LYY+RFFPYY +N++ GLD EGKGCVY+YD VGSYER 
Sbjct: 41  MYKNDHHKEMSCPAIAAMISTILYYRRFFPYYVYNIVAGLDTEGKGCVYSYDPVGSYERE 100

Query: 100 GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV--TPLSEAEAVDLVKTCFASATERDI 157
            Y S GS S ++ P LDNQ+          Q+ V    LS  +AV+L K  F SA ERDI
Sbjct: 101 SYRSAGSASAMLQPLLDNQIG------FKNQEGVEQVALSRDKAVNLAKDVFISAAERDI 154

Query: 158 YTGDKLEIVVLNKGGIHREYMELRKD 183
           YTGD + I V++K GI  +   LR+D
Sbjct: 155 YTGDSIIINVIDKNGITSDSFPLRRD 180


>gi|301108459|ref|XP_002903311.1| proteasome subunit beta, putative [Phytophthora infestans T30-4]
 gi|262097683|gb|EEY55735.1| proteasome subunit beta, putative [Phytophthora infestans T30-4]
          Length = 247

 Score =  153 bits (387), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 75/168 (44%), Positives = 105/168 (62%), Gaps = 5/168 (2%)

Query: 16  CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNV 75
            V+   G   D+  L+ +L+ R  +YQH +   M+   M+QLL NTLY +RFFPYY+F +
Sbjct: 85  TVLGCPGSHNDIIQLRGVLSIRAQMYQHDNETSMTSSAMSQLLMNTLYSRRFFPYYAFCI 144

Query: 76  LGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP 135
           L G+D  GKG VYTYDA+GSY+RV  ++QGSG  L++P LDN ++  +       D    
Sbjct: 145 LCGIDENGKGVVYTYDAIGSYDRVTRAAQGSGGHLMIPLLDNLVEHDT-----RTDPKKA 199

Query: 136 LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           L+  E  D++K  F +A ERDIYTGD +EI+ +   GI RE   L+KD
Sbjct: 200 LTLQETKDIIKDAFITAGERDIYTGDSVEILTIKASGIDREMFALKKD 247


>gi|167393146|ref|XP_001740446.1| proteasome subunit beta type-1 [Entamoeba dispar SAW760]
 gi|165895460|gb|EDR23141.1| proteasome subunit beta type-1, putative [Entamoeba dispar SAW760]
          Length = 221

 Score =  153 bits (386), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 80/174 (45%), Positives = 107/174 (61%), Gaps = 14/174 (8%)

Query: 3   SFFYILTSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTL 62
           S  Y LTS    KC+   SG +AD+K L   + A    Y++++ K+MS   +AQ+LSNTL
Sbjct: 55  SKIYPLTS----KCIFTGSGMRADMKELTDQIKAHIKNYKYENGKEMSTESVAQVLSNTL 110

Query: 63  YYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSP 122
           Y  RFFPYYSF++L G++++GK   Y YDAVGS+E   YS  GSG  L  P LD+ LK  
Sbjct: 111 YSHRFFPYYSFSLLAGINSKGKAVTYNYDAVGSFEERKYSCSGSGEELAYPLLDSLLK-- 168

Query: 123 SPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHRE 176
                   D   PL E EA+++ +    SA ERDI+TGD +EIV+LN  GI +E
Sbjct: 169 --------DRTEPLGEQEAINIARDVMTSACERDIHTGDNVEIVILNSKGIRKE 214


>gi|359473811|ref|XP_002264176.2| PREDICTED: proteasome subunit beta type-1-like [Vitis vinifera]
          Length = 149

 Score =  153 bits (386), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 71/81 (87%), Positives = 74/81 (91%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           ADKCVMASSGFQADV+ALQK LAAR LIYQHQHNKQMSCP MAQLLSNTLYYKRFFPYYS
Sbjct: 53  ADKCVMASSGFQADVRALQKHLAARQLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYS 112

Query: 73  FNVLGGLDNEGKGCVYTYDAV 93
           FNVLGGLDNEGKG  + +D V
Sbjct: 113 FNVLGGLDNEGKGWRWRFDIV 133


>gi|126644014|ref|XP_001388169.1| proteasome subunit beta type 1 [Cryptosporidium parvum Iowa II]
 gi|126117246|gb|EAZ51346.1| proteasome subunit beta type 1, putative [Cryptosporidium parvum
           Iowa II]
          Length = 246

 Score =  152 bits (385), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 75/171 (43%), Positives = 110/171 (64%), Gaps = 6/171 (3%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            +KC++A SG  AD+ AL+K L A+  +Y+ +HNK  S   +AQLLS  LY KRFFPYYS
Sbjct: 82  TNKCILACSGMLADINALRKTLLAKVKLYEFEHNKTPSINAIAQLLSCILYSKRFFPYYS 141

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           F +L GLD +GKG VY YDAVGS+++  + + GSG +LI   LDNQ+   +      Q +
Sbjct: 142 FCLLSGLDEQGKGVVYGYDAVGSFDQHKFVALGSGGSLITSILDNQISGNN------QTS 195

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              + +   +++VK    SA+ERD++TGD  E++V++  GI    + LR+D
Sbjct: 196 FESIDKVGIINIVKDSITSASERDVHTGDSAEVIVIDSSGISVSSLRLRED 246


>gi|170035625|ref|XP_001845669.1| proteasome subunit beta type 1 [Culex quinquefasciatus]
 gi|167877642|gb|EDS41025.1| proteasome subunit beta type 1 [Culex quinquefasciatus]
          Length = 231

 Score =  152 bits (385), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 77/171 (45%), Positives = 106/171 (61%), Gaps = 4/171 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           ++  V+AS+G   D  AL  L+  R  +Y+ QH K M+ P +AQ+LS  +Y +RFFPYY 
Sbjct: 65  SEGTVLASTGCWCDTLALTSLVKVRMQMYKDQHQKNMTTPAVAQMLSILMYNRRFFPYYV 124

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            NVL GLD EG+G VY+YD +G  E+  Y + GS   L+ P LDNQ+     L      +
Sbjct: 125 SNVLAGLDEEGRGVVYSYDPIGHCEKTTYRAGGSAGPLLQPVLDNQIG----LKNMVGAS 180

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             P+  A+AV ++K  F SATERDIYTGD + I ++ K GI  E ++LRKD
Sbjct: 181 TEPVQLAKAVSIIKDTFISATERDIYTGDSVIINIITKDGIKEEVVQLRKD 231


>gi|405957660|gb|EKC23857.1| Proteasome subunit beta type-1 [Crassostrea gigas]
          Length = 229

 Score =  152 bits (384), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 76/170 (44%), Positives = 108/170 (63%), Gaps = 8/170 (4%)

Query: 16  CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNV 75
            V+ + GF  DV  L K+L AR  +++H+H+K+M+   +A +LS  LY++RFFPYY +N+
Sbjct: 66  TVLGACGFHGDVLTLTKVLNARLKMFEHEHHKKMTTSEIAAMLSTMLYHRRFFPYYVYNL 125

Query: 76  LGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-- 133
           + GLD EGKG VY++D VGSY   GY ++GS + ++ P LDNQ+       L  Q  V  
Sbjct: 126 IAGLDEEGKGVVYSFDPVGSYGSDGYRARGSAAAMLQPLLDNQIG------LKNQQNVQR 179

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             LS+ + V+LVK  F SA ERDIYTGD + + V+ K G   E   LR+D
Sbjct: 180 VSLSKEKVVNLVKDVFISAAERDIYTGDAVVVHVITKDGTTTERFPLRRD 229


>gi|229366584|gb|ACQ58272.1| Proteasome subunit beta type-1-A [Anoplopoma fimbria]
          Length = 237

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 75/172 (43%), Positives = 105/172 (61%), Gaps = 8/172 (4%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D  V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY + FFPYY +
Sbjct: 72  DTTVIGCSGFHGDCLTLTKIIDARLKMYKHSNNKTMTSNAIAAMLSTILYGRGFFPYYVY 131

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD  GKG VY++D VGSY+R  Y + GS S ++ P LDNQ+           + V
Sbjct: 132 NIIGGLDEHGKGAVYSFDPVGSYQRDTYKAGGSASAVLQPLLDNQIG------FKNMEGV 185

Query: 134 --TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              PL++ +AV LVK  F SA ERD+Y GD L + ++ K GI  + + LRKD
Sbjct: 186 QHVPLTQDKAVQLVKDVFISAAERDVYIGDALRVCIITKEGISEQTVPLRKD 237


>gi|197129775|gb|ACH46273.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
          Length = 238

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 73/170 (42%), Positives = 108/170 (63%), Gaps = 4/170 (2%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           ++ V+  +GF  D   L K++ A   +Y+H + K M+   +A +LS  LY +RFFPYY +
Sbjct: 73  ERTVIGCTGFHGDCLTLTKIIEAGGEMYKHSNFKTMTTGAIAAMLSTILYSRRFFPYYVY 132

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSYER  + + GS S ++ P LDNQ+   +   +      
Sbjct: 133 NIIGGLDEEGKGAVYSFDPVGSYERDNFKAGGSASAMLQPLLDNQIGFKNMQNVEH---- 188

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            PL+  +A+ LVK  F SA ERD+YTGD L+I ++ K GI  + ++LRKD
Sbjct: 189 VPLTLEKALQLVKDVFISAAERDVYTGDALKICIVTKDGIKEQSIQLRKD 238


>gi|83314992|ref|XP_730601.1| proteasome subunit beta type 1 [Plasmodium yoelii yoelii 17XNL]
 gi|23490372|gb|EAA22166.1| proteasome subunit beta type 1-related [Plasmodium yoelii yoelii]
          Length = 214

 Score =  150 bits (379), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 72/171 (42%), Positives = 112/171 (65%), Gaps = 5/171 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            DKC++ SSG Q+D+K L  LL  +  ++  +H+   S   +A+LL  TLY +RFFPYY+
Sbjct: 49  TDKCIIGSSGMQSDIKTLHSLLQKKIQLFYLEHSHYPSIHVIAKLLCVTLYSRRFFPYYT 108

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FN+L G+D +GKG +Y+YDA+GSY    ++  GSGS+LI+P LDN+++  + L+      
Sbjct: 109 FNILAGIDEDGKGVLYSYDAIGSYYMSTHACTGSGSSLILPILDNRVEQKNQLI-----K 163

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
               +  + ++ VK    SATERDIYTGD+ EI +++  GI+   ++L+KD
Sbjct: 164 NIDFNLRDDINFVKDAMTSATERDIYTGDQAEIYIIDNLGINTTLLDLKKD 214


>gi|403374976|gb|EJY87456.1| Proteasome subunit beta type [Oxytricha trifallax]
          Length = 255

 Score =  150 bits (378), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 78/179 (43%), Positives = 109/179 (60%), Gaps = 7/179 (3%)

Query: 6   YILTSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYK 65
           Y  T+   D+CV+ S G  AD++ L KLL ++   YQ Q  K  +   +AQLL NTLY +
Sbjct: 83  YSRTTRLTDQCVITSGGMVADIETLHKLLISKVKTYQRQFKKTPTVESLAQLLGNTLYGR 142

Query: 66  RFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPL 125
           RF P+Y+FN+L G+D  G+G VY YDA+GSY+++ Y  QGSGS L  P LDNQ    + L
Sbjct: 143 RFMPFYAFNLLCGIDVNGQGTVYGYDAIGSYDKLTYGVQGSGSELGAPILDNQFTGHNYL 202

Query: 126 LLP-AQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           +   A+D        E  D  K    S  ERDIYTGD++E+V++NK G+  +   +R+D
Sbjct: 203 VKTLAKDV------QEVEDTAKDIINSIAERDIYTGDQVEVVIVNKHGVTVKREPIRRD 255


>gi|313231365|emb|CBY08480.1| unnamed protein product [Oikopleura dioica]
          Length = 242

 Score =  150 bits (378), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 71/170 (41%), Positives = 103/170 (60%), Gaps = 4/170 (2%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D C +   GFQ D + L + + A+  IY+HQH +Q + P +A +LS  LYYKRFFPYY +
Sbjct: 77  DHCAIGQCGFQGDARVLLQNVKAKIRIYEHQHMEQPTAPAIAAMLSTMLYYKRFFPYYVY 136

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++ GLD +GKG V++YD VGSY++V     GS   LI PFLDNQ++ P       +DA 
Sbjct: 137 NIVAGLDGDGKGSVFSYDPVGSYDQVPMVCYGSAQNLIQPFLDNQIRRPH----IKEDAA 192

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             ++      L    F SA+ER+  TGD + + +++K G   E + LR+D
Sbjct: 193 PKMTRERVRQLAIDAFISASERETNTGDGITVTLIDKTGTTVETIPLRRD 242


>gi|440293947|gb|ELP86994.1| proteasome subunit beta type 1, putative, partial [Entamoeba
           invadens IP1]
          Length = 173

 Score =  149 bits (375), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 77/168 (45%), Positives = 106/168 (63%), Gaps = 12/168 (7%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           + KC+  +SG +AD+  L   L A+   Y++++NK+MS   +AQLLSNTLY  RFFPYYS
Sbjct: 13  SSKCIFTASGMRADMNELTDQLKAQIKNYRYENNKEMSTEAIAQLLSNTLYSHRFFPYYS 72

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           F++L GL  +G+  +Y YDAVGS++ V Y+  GSG  L  P LD  LK  + +LL     
Sbjct: 73  FSILTGLSVKGEPLIYNYDAVGSFQEVAYTCSGSGEELAYPLLDALLKQRTEVLL----- 127

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI--HREYM 178
                E E V++ +    SA ERDI+TGD +E+ VLNK GI   +EYM
Sbjct: 128 -----EKEGVNIARDVMTSACERDIHTGDDVELYVLNKNGITYTKEYM 170


>gi|296088721|emb|CBI38171.3| unnamed protein product [Vitis vinifera]
          Length = 246

 Score =  149 bits (375), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 70/75 (93%), Positives = 71/75 (94%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           ADKCVMASSGFQADV+ALQK LAAR LIYQHQHNKQMSCP MAQLLSNTLYYKRFFPYYS
Sbjct: 141 ADKCVMASSGFQADVRALQKHLAARQLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYS 200

Query: 73  FNVLGGLDNEGKGCV 87
           FNVLGGLDNEGKG V
Sbjct: 201 FNVLGGLDNEGKGWV 215


>gi|361131660|gb|EHL03312.1| putative proteasome component C5 [Glarea lozoyensis 74030]
          Length = 263

 Score =  148 bits (374), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 84/184 (45%), Positives = 112/184 (60%), Gaps = 10/184 (5%)

Query: 9   TSCRADKC-VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRF 67
           TS + D   V++  GF AD  AL++ L A   +Y++QH K MS    AQ LS  LY KRF
Sbjct: 81  TSSQDDATLVLSVVGFAADGAALKERLDAIVKMYRYQHGKPMSVKACAQRLSTILYGKRF 140

Query: 68  FPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLL- 126
           FPYY   +LGGLD EGKG VY+YD VGSYER    + G+ ++LIMPFLDNQ+   +  + 
Sbjct: 141 FPYYVTAILGGLDEEGKGAVYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNYKNQYIP 200

Query: 127 -------LPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYME 179
                  L  ++ + PL   E  DLVK  F SA ER I  GD L+++++ K GI  +Y+ 
Sbjct: 201 GSGEGHALQEREKI-PLPRNEVEDLVKDAFDSAVERHIEVGDGLQMLIITKSGIEEKYLP 259

Query: 180 LRKD 183
           L+KD
Sbjct: 260 LKKD 263


>gi|121543861|gb|ABM55595.1| putative proteasome subunit, beta type, 1 [Maconellicoccus
           hirsutus]
          Length = 229

 Score =  147 bits (372), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 70/166 (42%), Positives = 107/166 (64%), Gaps = 4/166 (2%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLG 77
           +A +G  +DV    +L+ AR  +Y H+HNK+MS P +AQ+LS  +Y+KRFFPYY  N+LG
Sbjct: 68  LACAGCWSDVLTFTRLINARMQMYLHEHNKEMSTPALAQMLSTMMYHKRFFPYYVSNILG 127

Query: 78  GLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLS 137
           GL+ +G G +Y+YD +G+ ER  + + GS   L+ P LDNQL   +   + ++     +S
Sbjct: 128 GLEKDGSGWIYSYDPIGNMERSKFRAGGSSGALLQPLLDNQLGFANMENVESR----SIS 183

Query: 138 EAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             +A+ +V+  F SA ERDIYTGDK+ + V+ K  I  + ++L KD
Sbjct: 184 LEKALAVVRDVFISAAERDIYTGDKIHVTVITKDEIKEDTLQLTKD 229


>gi|195016569|ref|XP_001984439.1| GH16458 [Drosophila grimshawi]
 gi|193897921|gb|EDV96787.1| GH16458 [Drosophila grimshawi]
          Length = 235

 Score =  146 bits (369), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 72/168 (42%), Positives = 104/168 (61%), Gaps = 2/168 (1%)

Query: 16  CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNV 75
            V+ S+G   D  +L  L+  R  +Y+H H K M+   +AQ+LS  +Y +RFFPYY  N+
Sbjct: 70  TVLGSTGCWCDTLSLTGLMKVRMQMYEHTHMKTMTTDAVAQMLSIVMYNRRFFPYYVSNI 129

Query: 76  LGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP 135
           L GLD +GKG VY+YD +G  ER  Y + G+  +L+ P LDNQ+   +  L  A D + P
Sbjct: 130 LAGLDKDGKGVVYSYDPIGHCERATYRAGGTAGSLLQPVLDNQIGYKNQNL--AADQLPP 187

Query: 136 LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           L++  AV +    F SA ERDIYTGD + I ++ K GI ++ ++LRKD
Sbjct: 188 LTKDRAVSVASDTFISAAERDIYTGDSVLINIITKDGIEQKTLQLRKD 235


>gi|389584151|dbj|GAB66884.1| proteasome subunit beta type 1 [Plasmodium cynomolgi strain B]
          Length = 241

 Score =  146 bits (368), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 72/171 (42%), Positives = 106/171 (61%), Gaps = 5/171 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            DKC++ SSG Q+D+K L  LL  +  ++  +H        +A+LL   LY +RFFPYY+
Sbjct: 76  TDKCIIGSSGMQSDIKTLHSLLKKKIELFVLEHAHYPDIHVIARLLCVILYSRRFFPYYT 135

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FN+L G+ NE KG +Y YDA+GSY    +S  GSGS LI+P LDN+++  + L+      
Sbjct: 136 FNLLAGVSNENKGVLYNYDAIGSYCEATHSCVGSGSALILPILDNRMEQKNQLIKNLN-- 193

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
               +  + +D VK    SATERDIYTGDK EI +++  G++   +EL++D
Sbjct: 194 ---FNLRDDIDFVKDAITSATERDIYTGDKTEIYIIDHMGVNTTTLELKQD 241


>gi|61612096|gb|AAX47290.1| proteasome beta 1 subunit [Clonorchis sinensis]
          Length = 217

 Score =  146 bits (368), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 74/167 (44%), Positives = 104/167 (62%), Gaps = 5/167 (2%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V+A++GF  DV  L KLL  R   Y++ H K++S    A LLS TLY +RFFP+Y  ++L
Sbjct: 56  VLATTGFHGDVLTLTKLLENRVKTYRYDHGKEISTNAFAALLSVTLYTRRFFPFYVSSIL 115

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPL 136
           GGLD EG+G VY YD VGS+ERV  ++ GS   ++ PFLD++++  +         + PL
Sbjct: 116 GGLDEEGRGAVYRYDPVGSFERVKCAAAGSSGVILQPFLDHRVEGKN-----LSSGLPPL 170

Query: 137 SEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            +AEA+ L K  F SA ERDI  GD + I V+ + GI   +  LR+D
Sbjct: 171 EKAEAIKLAKDIFISAAERDINCGDAVLIQVITRDGIEEFHFPLRRD 217


>gi|195375426|ref|XP_002046502.1| GJ12457 [Drosophila virilis]
 gi|194153660|gb|EDW68844.1| GJ12457 [Drosophila virilis]
          Length = 235

 Score =  145 bits (367), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 74/169 (43%), Positives = 103/169 (60%), Gaps = 2/169 (1%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           K V+ S+G   D  +L  L+  R  +Y+H H K MS   +AQ+LS  +Y +RFFPYY  N
Sbjct: 69  KTVLGSTGCWCDTLSLTGLVKVRMQMYEHTHMKTMSTDAVAQMLSIVMYNRRFFPYYVSN 128

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 134
           +L GLD +GKG VY+YD +G  ER  Y + G+   L+ P LDNQ+   +   LPA D + 
Sbjct: 129 ILAGLDKDGKGAVYSYDPIGHCERATYRAGGTAGALLQPVLDNQIGYKNQ-NLPA-DQLP 186

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           PL++  AV +    F SA ERDIYTGD + I ++ K G+    ++LRKD
Sbjct: 187 PLTKERAVAVASDTFISAAERDIYTGDSVLINIITKDGVEERKLQLRKD 235


>gi|219114683|ref|XP_002176500.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217402501|gb|EEC42514.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 130

 Score =  145 bits (366), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 69/135 (51%), Positives = 94/135 (69%), Gaps = 5/135 (3%)

Query: 49  MSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGS 108
           MS P +AQ+LSNTLYYKRFFPYY+FNV+GG+D +GKG VY+YDA+GS+ER  YS+ GSG 
Sbjct: 1   MSTPSIAQMLSNTLYYKRFFPYYAFNVMGGVDAQGKGAVYSYDAIGSFERSTYSANGSGQ 60

Query: 109 TLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVL 168
             I+P LDN + + + L  P       L+  E V+++K  F SA ERDIYTGD++EI V+
Sbjct: 61  AYIIPLLDNVIGNRNRLDEPPN-----LTAEEVVEILKDAFLSAGERDIYTGDQVEICVV 115

Query: 169 NKGGIHREYMELRKD 183
               +  ++  L+ D
Sbjct: 116 RADSVTTQHFALKAD 130


>gi|311334476|emb|CBN08619.1| proteasome (prosome, macropain) subunit, beta type 1 [Microcosmus
           squamiger]
          Length = 181

 Score =  145 bits (366), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 74/167 (44%), Positives = 106/167 (63%), Gaps = 4/167 (2%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V+ ++GF  D   L+K+L  R  +Y H+H K+ S   +A +LS  LYYKRFFPYY +N+L
Sbjct: 19  VLGAAGFHGDALTLRKVLKYRIKMYVHEHGKEPSVCAIAAMLSTILYYKRFFPYYVYNLL 78

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPL 136
            G+D EGKGCV++YD VG YER  Y ++GS + L+ P LDNQ+   + +    ++A+T  
Sbjct: 79  AGIDEEGKGCVFSYDPVGCYEREAYRAEGSAAELLQPLLDNQIGYKN-MENANREALT-- 135

Query: 137 SEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            +  A+ LVK  F SA ERDI TGD + I V++  G+      LR+D
Sbjct: 136 -KERALQLVKDVFISAAERDITTGDGVLIHVIDGRGVQTHEFPLRRD 181


>gi|406862546|gb|EKD15596.1| proteasome component C5 [Marssonina brunnea f. sp. 'multigermtubi'
           MB_m1]
          Length = 264

 Score =  145 bits (366), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 82/183 (44%), Positives = 110/183 (60%), Gaps = 8/183 (4%)

Query: 9   TSCRADKC-VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRF 67
           TS + D   V++  GF AD +AL++ L A   +Y++QH K MS    AQ LS  LY KRF
Sbjct: 82  TSSQDDATLVLSVVGFAADGEALKERLDAVVKMYRYQHGKPMSVKACAQRLSTILYGKRF 141

Query: 68  FPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLL 127
           FPYY   +LGGLD EG+G VY+YD VGSYER    + G+ ++LIMPFLDNQ+   +  + 
Sbjct: 142 FPYYVTAILGGLDEEGRGAVYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNFKNQYIP 201

Query: 128 PA-------QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMEL 180
            +       +    PL  +E  DLVK  F SA ER I  GD L+++++ K GI   Y  L
Sbjct: 202 GSGIGHALQEREKLPLPRSEVEDLVKDAFDSAVERHIEVGDGLQMLIVTKNGIEEIYKPL 261

Query: 181 RKD 183
           +KD
Sbjct: 262 KKD 264


>gi|452980444|gb|EME80205.1| hypothetical protein MYCFIDRAFT_49844 [Pseudocercospora fijiensis
           CIRAD86]
          Length = 263

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 82/181 (45%), Positives = 108/181 (59%), Gaps = 17/181 (9%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           K V++  GF AD  AL++ L     +Y++QH K +S    AQ LS+ LY KRFFPYY   
Sbjct: 88  KIVLSVVGFAADGNALKERLDTIVKMYKYQHGKDISIGACAQRLSHILYGKRFFPYYVTA 147

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL--------KSPSPL- 125
           +LGG+D EGKG +Y+YD VGSYER    S G+ S+LI PFLDNQ+        ++P  L 
Sbjct: 148 ILGGIDEEGKGALYSYDPVGSYEREQCRSAGAASSLITPFLDNQVNLKNQHDPQAPQGLN 207

Query: 126 ---LLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRK 182
              L+P      PLS A   DLVK  F SA ER I  GD L+++++ + GI   Y  L+K
Sbjct: 208 KTALVP-----RPLSRAHVEDLVKDAFTSAVERHIEVGDGLQMMIITRDGIQETYSPLKK 262

Query: 183 D 183
           D
Sbjct: 263 D 263


>gi|325184015|emb|CCA18472.1| proteasome subunit beta putative [Albugo laibachii Nc14]
          Length = 247

 Score =  144 bits (364), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 72/167 (43%), Positives = 106/167 (63%), Gaps = 5/167 (2%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V+AS G   DV  L+ +L  +  +Y H +   +S   ++Q+L NTLY +RFFPYY+F VL
Sbjct: 86  VLASPGSHNDVIQLRGMLQLQIQMYMHDNQAIISTENLSQVLMNTLYSRRFFPYYAFCVL 145

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPL 136
            G+D +GKG VY+YDA+GSY+RV   + GSG  L++P LDN ++  S       D     
Sbjct: 146 AGIDKDGKGAVYSYDAIGSYDRVSRGAVGSGGHLMIPLLDNLVEHYS-----RTDPKREF 200

Query: 137 SEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           ++ E  +++K  F +A ERDIYTGD +EI+ +   GI +E+ EL+KD
Sbjct: 201 TQQETKEIIKDAFITAGERDIYTGDCVEIMTITASGIEKEHFELKKD 247


>gi|156036420|ref|XP_001586321.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
 gi|154698304|gb|EDN98042.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 264

 Score =  144 bits (364), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 79/174 (45%), Positives = 105/174 (60%), Gaps = 7/174 (4%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V++  GF AD +AL++ L A   +Y++QH K MS    AQ L+  LY KRFFPYY   +L
Sbjct: 91  VLSVVGFAADGEALKERLDAIVKMYRYQHGKPMSVKACAQRLATILYSKRFFPYYVTAIL 150

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLP-------A 129
           GGLD EGKG VY+YD VGSYER    + G+ ++LIMPFLDNQ+   +  +         A
Sbjct: 151 GGLDEEGKGAVYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNFKNQYIPGSGVGHELA 210

Query: 130 QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           +    PL   E  DLVK  F SA ER I  GD L+++++ K GI   Y  L++D
Sbjct: 211 EREKIPLPRNEVEDLVKDAFDSAVERHIEVGDGLQMLIITKDGIEEIYKPLKRD 264


>gi|71028614|ref|XP_763950.1| proteasome beat subunit [Theileria parva strain Muguga]
 gi|68350904|gb|EAN31667.1| proteasome beat subunit, putative [Theileria parva]
          Length = 218

 Score =  144 bits (364), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 73/171 (42%), Positives = 110/171 (64%), Gaps = 5/171 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            DKC++ +SG QAD+ ALQ +L  +  +Y++ HN++ +   +AQLLS  LY +RFFPYY+
Sbjct: 53  TDKCILGTSGMQADMLALQSVLERQIELYRYTHNREPTFNAIAQLLSTVLYGRRFFPYYT 112

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FN+L G+D +GKG V  YDAVG+Y    Y++QG+ S+L++  LDN L   +  + P  ++
Sbjct: 113 FNILCGIDEQGKGVVCGYDAVGNYNYEKYTAQGTSSSLVISVLDNLLNGNNQKVKPEVNS 172

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           +  L     V+LVK    SA ERDI TGD  E+V+ +   +   +M+LR D
Sbjct: 173 LEDL-----VNLVKNAMVSAVERDICTGDSAELVICDGVVMEPVHMDLRID 218


>gi|154308528|ref|XP_001553600.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
 gi|347826621|emb|CCD42318.1| similar to proteasome subunit beta type-1-A [Botryotinia
           fuckeliana]
          Length = 264

 Score =  144 bits (364), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 79/174 (45%), Positives = 105/174 (60%), Gaps = 7/174 (4%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V++  GF AD +AL++ L A   +Y++QH K MS    AQ L+  LY KRFFPYY   +L
Sbjct: 91  VLSVVGFAADGEALKERLDAIVKMYRYQHGKPMSVKACAQRLATILYSKRFFPYYVTAIL 150

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLP-------A 129
           GGLD EGKG VY+YD VGSYER    + G+ ++LIMPFLDNQ+   +  +         A
Sbjct: 151 GGLDEEGKGAVYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNFKNQYIPGSGEGHALA 210

Query: 130 QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           +    PL   E  DLVK  F SA ER I  GD L+++++ K GI   Y  L++D
Sbjct: 211 EREKIPLPRKEVEDLVKDAFDSAVERHIEVGDGLQMLIITKEGIEEIYKPLKRD 264


>gi|320582525|gb|EFW96742.1| Beta 6 subunit of the 20S proteasome [Ogataea parapolymorpha DL-1]
          Length = 226

 Score =  144 bits (363), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 75/176 (42%), Positives = 106/176 (60%), Gaps = 6/176 (3%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            +  ++ ++GF AD   L K+   +   Y   HNK MS    A+ + + LY KRFFPYY 
Sbjct: 52  GNNLLLTANGFAADSAQLIKVFKNQLEWYHFDHNKPMSTQSAARFIQHLLYGKRFFPYYV 111

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
             +LGGLD EGKG +Y++D VGSYER    + G+ ++LIMPFLDNQ+   +  + PA D 
Sbjct: 112 HTILGGLDEEGKGAIYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKN-QMDPASDG 170

Query: 133 -----VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                +  LS  E + LV+  F+SATER I  GD LEI+++ K G+  EY  L++D
Sbjct: 171 KKRKPIRFLSLEEVIQLVRDAFSSATERHIQVGDGLEILIVTKDGVRTEYYPLKRD 226


>gi|296004560|ref|XP_002808699.1| proteasome subunit beta type 1, putative [Plasmodium falciparum
           3D7]
 gi|225631686|emb|CAX63970.1| proteasome subunit beta type 1, putative [Plasmodium falciparum
           3D7]
          Length = 240

 Score =  144 bits (363), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 72/171 (42%), Positives = 107/171 (62%), Gaps = 5/171 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            DKC++ SSG Q+D+K L  LL  +  ++  +H+       +A+LL   LY +RFFPYY+
Sbjct: 75  TDKCIIGSSGMQSDIKTLHSLLQKKIQLFVLEHSHYPDIHVIARLLCVILYSRRFFPYYA 134

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FN+L G+D   KG +Y YD+VGSY    +S  GSGS LI+P LDN+++  + L+      
Sbjct: 135 FNILAGVDENNKGVLYNYDSVGSYCEATHSCVGSGSQLILPILDNRVEQKNQLI-----K 189

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            T  +  + ++ VK    SATERDIYTGDK  I V++K GI+   ++L++D
Sbjct: 190 NTNFNLGDDINFVKDAITSATERDIYTGDKTLIYVIDKMGINVNTLDLKQD 240


>gi|391338616|ref|XP_003743654.1| PREDICTED: proteasome subunit beta type-1-like [Metaseiulus
           occidentalis]
          Length = 233

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 68/170 (40%), Positives = 104/170 (61%), Gaps = 4/170 (2%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+ V+ SSG  AD  +L K L  R   Y  +HN+ MS   +AQ  S  LY +RFFPY+++
Sbjct: 68  DRAVLGSSGCWADCVSLNKFLEIRLKTYGFEHNQPMSTKAIAQCCSTMLYSRRFFPYFAW 127

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N+L G+D +GKG +Y+YD VG++ERV Y + G+    ++PFLD+ +   +     +    
Sbjct: 128 NILAGIDEDGKGAIYSYDPVGNFERVPYQAAGNSGPQVLPFLDSIVGKKN----QSNPDK 183

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            P+++  A++L+K  F SA ERDI  GD   I+V+ K G+    ++LRKD
Sbjct: 184 APITKERAINLIKDIFISAAERDITVGDGTHIIVITKDGLEEIRLDLRKD 233


>gi|209881526|ref|XP_002142201.1| proteasome subunit beta type 1 [Cryptosporidium muris RN66]
 gi|209557807|gb|EEA07852.1| proteasome subunit beta type 1, putative [Cryptosporidium muris
           RN66]
          Length = 245

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 77/169 (45%), Positives = 104/169 (61%), Gaps = 5/169 (2%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           KCV++ SG  AD+ ALQKL+ AR  IY+ +H K  S   +AQLLS  LY KRFFPYY + 
Sbjct: 82  KCVLSCSGMFADITALQKLIRARVKIYEFEHKKSPSIGAVAQLLSTVLYSKRFFPYYCYC 141

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 134
            + GLD  G G  Y YDAVGS++   Y + G+GS LI   LDNQ+ S +  L P      
Sbjct: 142 AIAGLDEYGNGVAYGYDAVGSFQSGKYFANGTGSHLISSILDNQI-SGNNQLYPK----I 196

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             ++ + +DL+K    SA+ERD+YTGD  ++VV++  GI      LR+D
Sbjct: 197 LTNKVDMIDLLKDAITSASERDVYTGDSAQVVVIDASGISISSFPLRQD 245


>gi|289742321|gb|ADD19908.1| 20S proteasome regulatory subunit beta type PSMB1/PRE7 [Glossina
           morsitans morsitans]
          Length = 236

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 106/175 (60%), Gaps = 9/175 (5%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           +   V+ S+G   D  AL  L+ AR  +Y+H H+K MS    AQ+LS  +Y +RFFPYY 
Sbjct: 67  SSNAVLGSTGCWCDTLALTALVKARMQMYEHTHSKTMSTDATAQMLSILMYNRRFFPYYV 126

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLL----LP 128
            NVL GL++EGKG VY+YD +G +E+    + GS   L+ P LDNQ+   +  +     P
Sbjct: 127 SNVLAGLNSEGKGVVYSYDPIGHFEKSNSRAGGSAGALLQPVLDNQIGLKNIKMEHIGFP 186

Query: 129 AQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           A+     L++  AV +    F SATERDIYTGD ++I ++ K GI  + ++LRKD
Sbjct: 187 AE-----LTKERAVAIASDAFISATERDIYTGDSVQINIITKSGIEVKELQLRKD 236


>gi|195135135|ref|XP_002011990.1| GI16713 [Drosophila mojavensis]
 gi|193918254|gb|EDW17121.1| GI16713 [Drosophila mojavensis]
          Length = 235

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 72/169 (42%), Positives = 102/169 (60%), Gaps = 2/169 (1%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           K V+ S+G   D  +L  L+  R  +Y+H H K M+   +AQ+LS  +Y +RFFPYY  N
Sbjct: 69  KTVLGSTGCWCDTLSLTGLVKVRMQMYEHTHLKTMTTDAVAQMLSIVMYNRRFFPYYVSN 128

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 134
           +L GLD +GKG VY+YD +G  ER  Y + GS   L+ P LDNQ+   +  L  + D + 
Sbjct: 129 ILAGLDKDGKGAVYSYDPIGHCERATYRAGGSAGALLQPVLDNQIGYKNQNL--SLDQLP 186

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           PL++  AV +    F SA ERDIYTGD + I ++   GI +  ++LRKD
Sbjct: 187 PLTKERAVAVASDTFISAAERDIYTGDSVLINIITADGIEKRELQLRKD 235


>gi|242023933|ref|XP_002432385.1| proteasome subunit beta type, putative [Pediculus humanus corporis]
 gi|212517808|gb|EEB19647.1| proteasome subunit beta type, putative [Pediculus humanus corporis]
          Length = 219

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 74/171 (43%), Positives = 104/171 (60%), Gaps = 4/171 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           +D  V+  SG   D   L K++ A+  +Y H +NK M  P ++Q+LS  LYYKRF PY  
Sbjct: 53  SDTTVLGCSGCWCDTLQLTKVVRAQMQMYFHDNNKVMVTPAVSQMLSTLLYYKRFMPYLV 112

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           +NVL GLD++GKGCVY+YD +G  ER  + + GS   L+ P LDNQL   +   +  +  
Sbjct: 113 YNVLAGLDDQGKGCVYSYDPIGHCERSTFRAGGSSGALLQPLLDNQLGYHNMENVKKEQ- 171

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              L+  +A+ ++K  F +A ERDIYTGD + I V+ K GI  E  +LRKD
Sbjct: 172 ---LTLEKALSVLKDVFIAAAERDIYTGDSIAIYVIKKDGIKSENFDLRKD 219


>gi|70954344|ref|XP_746223.1| proteasome subunit beta type 1 [Plasmodium chabaudi chabaudi]
 gi|56526764|emb|CAH76320.1| proteasome subunit beta type 1, putative [Plasmodium chabaudi
           chabaudi]
          Length = 252

 Score =  143 bits (360), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 73/181 (40%), Positives = 113/181 (62%), Gaps = 15/181 (8%)

Query: 13  ADKCVMASSGFQADVKALQKLLAA-------RH---LIYQHQHNKQMSCPGMAQLLSNTL 62
            DKC++ SSG Q+D+K L  LL         +H    ++  +H+   S   +A+LL  TL
Sbjct: 77  TDKCIIGSSGMQSDIKTLHSLLQVCYSKKLRKHKKIQLFYLEHSHYPSVHVIAKLLCVTL 136

Query: 63  YYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSP 122
           Y +RFFPYY+FN+L G+D  GKG +Y+YDA+GSY +  ++  GSGS+LI+P LDN+++  
Sbjct: 137 YSRRFFPYYTFNILAGIDENGKGVLYSYDAIGSYYQSTHACTGSGSSLILPILDNRVEQK 196

Query: 123 SPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRK 182
           + L+          +  + ++ VK    SATERDIYTGD+ EI +++  GI+   ++L+K
Sbjct: 197 NQLIKNMD-----FNLGDDINFVKDAMTSATERDIYTGDQAEIYIIDNLGINTTLLDLKK 251

Query: 183 D 183
           D
Sbjct: 252 D 252


>gi|452837570|gb|EME39512.1| hypothetical protein DOTSEDRAFT_180093 [Dothistroma septosporum
           NZE10]
          Length = 263

 Score =  143 bits (360), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 77/176 (43%), Positives = 103/176 (58%), Gaps = 7/176 (3%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           K V++  GF AD KAL++ L     +Y++QH K +S    AQ LS+ LY KRFFPYY   
Sbjct: 88  KIVLSVVGFAADGKALKERLDTVVKMYKYQHGKDISVHACAQRLSHILYSKRFFPYYVTA 147

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK-------SPSPLLL 127
           +LGG+D EGKG +Y+YD VGSYER    + G+ S+LIMPFLDNQ+        + +    
Sbjct: 148 ILGGIDEEGKGALYSYDPVGSYEREATRAAGAASSLIMPFLDNQVNLKNQYDPTQAQGFG 207

Query: 128 PAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             Q    PL       LVK  F SA ER I  GD L+++++ K GI   Y  L++D
Sbjct: 208 KEQLVPKPLDRTTTEALVKDAFTSAVERHIEVGDGLQMMIITKEGIEERYAPLKRD 263


>gi|242247122|ref|NP_001156136.1| proteasome subunit beta type-like [Acyrthosiphon pisum]
 gi|239799300|dbj|BAH70578.1| ACYPI003417 [Acyrthosiphon pisum]
          Length = 222

 Score =  142 bits (359), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 73/171 (42%), Positives = 105/171 (61%), Gaps = 8/171 (4%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           +DK V+  +G   D  +L  ++ ++   Y + HN  M    +AQLLS  LY +RFFPYY 
Sbjct: 60  SDKSVLGCTGCWCDTLSLTNIIQSQLKSYLYDHNTIMQPNSIAQLLSTLLYSRRFFPYYV 119

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           +NVL GLD  G+GC+Y+YD VG  E+V Y++ GS   L+ PFLD+ L +        + A
Sbjct: 120 YNVLAGLDINGEGCLYSYDPVGHCEKVNYTAGGSSGVLMQPFLDSWLGN--------RTA 171

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             P++E EA+ LVK  F +A ERDIYTGD++   ++ K GI    ++LRKD
Sbjct: 172 ENPVTEEEALSLVKDAFTAAGERDIYTGDEVVYNIIKKNGIKTGVVQLRKD 222


>gi|156095478|ref|XP_001613774.1| proteasome subunit beta type 1 [Plasmodium vivax Sal-1]
 gi|148802648|gb|EDL44047.1| proteasome subunit beta type 1, putative [Plasmodium vivax]
          Length = 241

 Score =  142 bits (359), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 70/171 (40%), Positives = 106/171 (61%), Gaps = 5/171 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            DKC++ SSG Q+D+K L  LL  +  ++  +H        +A+LL   LY +RFFPYY+
Sbjct: 76  TDKCIIGSSGMQSDIKTLHSLLKKKIELFVLEHAHYPDIHVIARLLCVILYSRRFFPYYT 135

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FN+L G+ N+ KG +Y YDA+GSY    +S  GSGS LI+P LDN+++  + L+      
Sbjct: 136 FNLLAGVSNDSKGVLYNYDAIGSYCEATHSCVGSGSALILPILDNRMEQKNQLIKNLN-- 193

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
               +  + +D VK    SATERDIYTGD  EI ++++ G++   +EL++D
Sbjct: 194 ---FNLRDDLDFVKDAITSATERDIYTGDSTEIYIIDQMGVNTTSLELKQD 241


>gi|50287473|ref|XP_446166.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49525473|emb|CAG59090.1| unnamed protein product [Candida glabrata]
          Length = 242

 Score =  142 bits (359), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 75/177 (42%), Positives = 107/177 (60%), Gaps = 7/177 (3%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPGMAQLLSNTLYYKRFFPYY 71
            D  +M+++GF AD +AL K        Y   HN K++S    A+ + + LY KRFFPYY
Sbjct: 67  GDNIIMSANGFAADGEALVKRFKNSIKWYHFDHNDKKLSISSAARNIQHLLYGKRFFPYY 126

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
              ++ GLD+EGKG VY++D VGSYER    + G+ ++LIMPFLDNQ+   +   +P  D
Sbjct: 127 VHTIIAGLDDEGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-YVPGTD 185

Query: 132 AVTP-----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                    LS  E + LV+  F SATER I+ GD LEI+++ K G+  E+ EL++D
Sbjct: 186 GKVKRELKYLSLEEVIKLVRDAFTSATERHIHVGDGLEILIVTKEGVRTEFFELKRD 242


>gi|403216524|emb|CCK71021.1| hypothetical protein KNAG_0F03590 [Kazachstania naganishii CBS
           8797]
          Length = 248

 Score =  142 bits (359), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 76/174 (43%), Positives = 106/174 (60%), Gaps = 3/174 (1%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPGMAQLLSNTLYYKRFFPYY 71
            D  V++++GF AD  AL K        Y    N K++S    A+ + + LY KRFFPYY
Sbjct: 75  GDGIVISANGFAADSTALVKRFRNSLKWYHFNENEKRLSLSAAARNIQHLLYGKRFFPYY 134

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLL--LPA 129
              ++ GLD EGKG VY++D VGSYER    + G+ ++LIMPFLDNQ+   +  +     
Sbjct: 135 VHTIIAGLDEEGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYVPGTGE 194

Query: 130 QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           +  +T LS  E V LV+  F SATER I+ GD LEI+++ K G+ REY EL++D
Sbjct: 195 KRPITYLSVEEVVKLVRDSFTSATERHIHVGDGLEILIVTKDGVRREYHELKRD 248


>gi|300120472|emb|CBK20026.2| unnamed protein product [Blastocystis hominis]
          Length = 322

 Score =  142 bits (359), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 71/168 (42%), Positives = 105/168 (62%), Gaps = 5/168 (2%)

Query: 16  CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNV 75
           CV+ ++G   D+  L + L      Y++ H +++S   +A LLSNTLY +RFFP Y+FNV
Sbjct: 44  CVLGNAGCWTDMTTLLRTLEYDIKEYKYNHREEISTSAVAALLSNTLYNRRFFPIYAFNV 103

Query: 76  LGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP 135
           L GLD  G+G +Y+YDA+GS+E + Y+ QGS  + I+P LD+ +   +       +    
Sbjct: 104 LCGLDENGQGVIYSYDAIGSFELMKYAVQGSAQSHIIPILDSCVAKKN-----RNEPYVD 158

Query: 136 LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           L   EA++L+K  F + TER+  TGD+LEI+ +   GI RE MELRKD
Sbjct: 159 LDREEALNLMKEVFTAGTEREKDTGDQLEILTVTAHGIEREVMELRKD 206


>gi|300120426|emb|CBK19980.2| unnamed protein product [Blastocystis hominis]
          Length = 322

 Score =  142 bits (358), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 71/168 (42%), Positives = 105/168 (62%), Gaps = 5/168 (2%)

Query: 16  CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNV 75
           CV+ ++G   D+  L + L      Y++ H +++S   +A LLSNTLY +RFFP Y+FNV
Sbjct: 44  CVLGNAGCWTDMTTLLRTLEYDIKEYKYNHREEISTSAVAALLSNTLYNRRFFPIYAFNV 103

Query: 76  LGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP 135
           L GLD  G+G +Y+YDA+GS+E + Y+ QGS  + I+P LD+ +   +       +    
Sbjct: 104 LCGLDENGQGVIYSYDAIGSFELMKYAVQGSAQSHIIPILDSCVAKKN-----RNEPYVD 158

Query: 136 LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           L   EA++L+K  F + TER+  TGD+LEI+ +   GI RE MELRKD
Sbjct: 159 LDREEALNLMKEVFTAGTEREKDTGDQLEILTVTAHGIEREVMELRKD 206


>gi|210075667|ref|XP_502489.2| YALI0D06523p [Yarrowia lipolytica]
 gi|199425772|emb|CAG80677.2| YALI0D06523p [Yarrowia lipolytica CLIB122]
          Length = 248

 Score =  142 bits (358), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 70/171 (40%), Positives = 108/171 (63%), Gaps = 4/171 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            D  ++ ++GF AD  AL + +     +Y +Q+NK +     A+ + + LY KRFFPYY 
Sbjct: 82  GDNILVTANGFSADGDALIENIKQHVELYHYQNNKPLKVQSCARAIQHMLYNKRFFPYYV 141

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
             ++ GLD EGKG VY+YD VGSYER    + GS ++L+MPFLD+Q+   +  +    + 
Sbjct: 142 HTIIAGLDEEGKGAVYSYDPVGSYEREFCRAGGSAASLVMPFLDSQVNKKNQQV----EN 197

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             PL+  EA+ +VK  F+SATER I+ GD LEI+++ K G+ +E+  L++D
Sbjct: 198 PPPLTLEEALKVVKDAFSSATERHIHVGDGLEILIVTKEGVRKEFFPLKRD 248


>gi|406602407|emb|CCH46023.1| Proteasome subunit beta type-1-A [Wickerhamomyces ciferrii]
          Length = 242

 Score =  142 bits (358), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 73/176 (41%), Positives = 105/176 (59%), Gaps = 6/176 (3%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            D  V++++GF AD  AL          Y   +NK++S    A+ + + LY KRFFPYY 
Sbjct: 68  GDNIVVSANGFSADGNALVSRFKNHLKWYHFNNNKKISLSSAARFIQHMLYGKRFFPYYV 127

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
             ++ GLD+EGKG VY++D VGSYER    + G+ ++LIMPFLDNQ+   +    P  D 
Sbjct: 128 HTIIAGLDDEGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-YEPGTDG 186

Query: 133 VTP-----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                   LS  E + LV+  F+SATER I+ GD LEI+++ K G+  EY +L++D
Sbjct: 187 KVKKELKYLSLEEVIQLVRDAFSSATERHIHVGDGLEILIVTKDGVRTEYFDLKRD 242


>gi|403224082|dbj|BAM42212.1| proteasome subunit [Theileria orientalis strain Shintoku]
          Length = 220

 Score =  142 bits (358), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 76/172 (44%), Positives = 108/172 (62%), Gaps = 7/172 (4%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            DKC++ +SG QAD+ ALQ ++  +  +Y+  H+K+ +   +AQLLS  LY +RFFPYY+
Sbjct: 55  TDKCILGTSGMQADMLALQSVIERQIEMYRFTHHKEPTFGAIAQLLSTVLYGRRFFPYYT 114

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FN+L GLD  G G    YDAVG+Y    Y++QG+ S+L++P LDN L   +  + P  ++
Sbjct: 115 FNILCGLDENGNGVTCNYDAVGNYNYEKYAAQGTSSSLVVPILDNLLNGNNQQVKPQINS 174

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREY-MELRKD 183
           +  L     V+LVK    SA ERDI TGD  E+VV + G +H    MELR D
Sbjct: 175 LEDL-----VNLVKNAMVSAVERDICTGDSAELVVCD-GVVHEPVRMELRVD 220


>gi|171680321|ref|XP_001905106.1| hypothetical protein [Podospora anserina S mat+]
 gi|170939787|emb|CAP65013.1| unnamed protein product [Podospora anserina S mat+]
          Length = 264

 Score =  142 bits (357), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 78/183 (42%), Positives = 111/183 (60%), Gaps = 8/183 (4%)

Query: 9   TSCRADKC-VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRF 67
           TS ++D   V++  GF AD +AL++ L A   +Y+++H K MS    AQ LS  LY KRF
Sbjct: 82  TSDQSDATLVLSVVGFAADGEALKERLDAICKMYRYRHGKPMSVKACAQRLSTILYQKRF 141

Query: 68  FPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLL 127
           FPYY++ +LGGLD EGKG VY+YD VGSYER    + G+ ++LIMPFLDNQ+   +  + 
Sbjct: 142 FPYYAYAILGGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQFIP 201

Query: 128 PAQDA-------VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMEL 180
            + +          PL+  E   LVK  F  A ER I  GD L+++++ K GI    + L
Sbjct: 202 GSGEGHALQERERRPLTRQEVETLVKDAFDGAVERHIEVGDGLQMMIITKEGIEEVILPL 261

Query: 181 RKD 183
           ++D
Sbjct: 262 KRD 264


>gi|367011887|ref|XP_003680444.1| hypothetical protein TDEL_0C03440 [Torulaspora delbrueckii]
 gi|359748103|emb|CCE91233.1| hypothetical protein TDEL_0C03440 [Torulaspora delbrueckii]
          Length = 241

 Score =  141 bits (356), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 76/176 (43%), Positives = 105/176 (59%), Gaps = 5/176 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPGMAQLLSNTLYYKRFFPYY 71
            D  VM+++GF AD +AL K        Y   HN K++S    A+ + + LY KRFFPYY
Sbjct: 66  GDNIVMSANGFAADGEALVKRFKNSVKWYHFDHNDKKLSLSSAARNIQHLLYGKRFFPYY 125

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
              ++ GLD EGKG VY++D VGSYER    + G+ ++LIMPFLDNQ+   +        
Sbjct: 126 VHTIIAGLDEEGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQFEPGTNG 185

Query: 132 AV----TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            V    T LS  E + LV+  F SATER I  GD LEI+++ K G+ +E+ EL++D
Sbjct: 186 KVRRPQTYLSIEEVIKLVRDAFTSATERHIQVGDGLEILIVTKDGVRKEFYELKRD 241


>gi|50308397|ref|XP_454200.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49643335|emb|CAG99287.1| KLLA0E05633p [Kluyveromyces lactis]
          Length = 240

 Score =  141 bits (356), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 71/174 (40%), Positives = 105/174 (60%), Gaps = 4/174 (2%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D  +++++GF AD +AL K      + Y   HNK+++    A+ + + LY KR FPYY  
Sbjct: 67  DNILISANGFAADGEALVKRFKNSQMWYHFNHNKKLTIKSAARNIQHLLYGKRMFPYYVH 126

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA---- 129
            ++ GLD EGKG VY++D VGSYER    + GS ++LIMPFLDNQ+   +     +    
Sbjct: 127 TIIAGLDEEGKGAVYSFDPVGSYEREQCRAGGSAASLIMPFLDNQVNLKNQYEPDSNGTK 186

Query: 130 QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           +  V  L   E + LV+  F SATER I  GD LEI+++ K G+ +EY +L++D
Sbjct: 187 RKEVKYLGVEEVIKLVRDAFTSATERHINVGDGLEILIVTKDGVRKEYFDLKRD 240


>gi|378725413|gb|EHY51872.1| 20S proteasome subunit beta 6 [Exophiala dermatitidis NIH/UT8656]
          Length = 264

 Score =  141 bits (355), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 76/178 (42%), Positives = 106/178 (59%), Gaps = 7/178 (3%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           + + V++  GF AD  AL++ L A   +Y++QH K MS    AQ LS  LY KRFFPYY 
Sbjct: 87  SSRIVLSVVGFAADGNALKERLDAIVKMYKYQHGKPMSVKACAQRLSTILYQKRFFPYYV 146

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA--- 129
             +LGGLD +GKG +Y+YD VGSYER    + G+ ++LIMPFLDNQ+   +  +  +   
Sbjct: 147 HAILGGLDEDGKGALYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNYKNQYIAGSGFG 206

Query: 130 ----QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
               Q     L +   + LVK  F SATER I  GD L+++++ K GI   Y  L++D
Sbjct: 207 HELQQRQPESLPKDVVIGLVKDAFTSATERHIEVGDGLQMLIITKDGIEETYTPLKRD 264


>gi|164422783|ref|XP_963776.2| proteasome component C5 [Neurospora crassa OR74A]
 gi|157069819|gb|EAA34540.2| proteasome component C5 [Neurospora crassa OR74A]
          Length = 265

 Score =  141 bits (355), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 79/174 (45%), Positives = 106/174 (60%), Gaps = 7/174 (4%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V++  GF AD +AL++ L A   +Y+++H K MS    AQ LS  LY KRFFPYY + +L
Sbjct: 92  VLSVVGFAADGEALKERLDAICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYYVYAIL 151

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK-----SPSPLLLPA-- 129
           GGLD EGKG VY+YD VGSYER    + G+ ++LIMPFLDNQ+       P   +  A  
Sbjct: 152 GGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPGSGVGHALQ 211

Query: 130 QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           +    PL+ +E   LVK  F  A ER I  GD L+++V+ K GI    + L+KD
Sbjct: 212 ERERKPLTRSEGEVLVKDAFDGAVERHIEVGDGLQMMVITKDGIEEVLLPLKKD 265


>gi|414886160|tpg|DAA62174.1| TPA: hypothetical protein ZEAMMB73_205941 [Zea mays]
          Length = 152

 Score =  140 bits (354), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 63/78 (80%), Positives = 71/78 (91%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           ADKCV+ASSGFQ D+KAL K LAAR L+YQHQHNK+MSCP MAQLLSNTLYYKRFFPYY+
Sbjct: 51  ADKCVLASSGFQGDIKALHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYA 110

Query: 73  FNVLGGLDNEGKGCVYTY 90
           FNVLGGLD+EGK C +T+
Sbjct: 111 FNVLGGLDSEGKVCCFTF 128


>gi|340992803|gb|EGS23358.1| putative proteasome protein [Chaetomium thermophilum var.
           thermophilum DSM 1495]
          Length = 265

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 76/174 (43%), Positives = 107/174 (61%), Gaps = 7/174 (4%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V++  GF AD +AL++ L A   +Y+++H K MS    AQ LS  LY KRFFPYY++ +L
Sbjct: 92  VLSVVGFAADGEALKERLDAICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYYAYAIL 151

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT-- 134
           GGLD EGKG VY+YD VGSYER    + G+ ++LIMPFLDNQ+   +  +  + +     
Sbjct: 152 GGLDEEGKGAVYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNFKNQYVPGSGEGHNLQ 211

Query: 135 -----PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                PL+ +E   LVK  F  A ER I  GD L+++V+ K GI    + L++D
Sbjct: 212 ERPRRPLTRSEVEVLVKDAFDGAVERHIEVGDGLQMMVITKDGIEEILLPLKRD 265


>gi|169601780|ref|XP_001794312.1| hypothetical protein SNOG_03764 [Phaeosphaeria nodorum SN15]
 gi|111067849|gb|EAT88969.1| hypothetical protein SNOG_03764 [Phaeosphaeria nodorum SN15]
          Length = 264

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 76/180 (42%), Positives = 106/180 (58%), Gaps = 9/180 (5%)

Query: 12  RADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYY 71
           +  + V++  GF AD  AL++ L     +Y++QH K MS    AQ LS+ LY KRFFPYY
Sbjct: 86  KGARIVLSVVGFAADGDALKERLDTIVKMYKYQHGKPMSVAACAQRLSHILYNKRFFPYY 145

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA-- 129
              +LGGLD  G G +Y+YD VGSYER    + G+ ++LIMPFLDNQ+   + +  P   
Sbjct: 146 VHAILGGLDENGTGALYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNFKN-MYEPGSG 204

Query: 130 ------QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                 Q  + PLS+    DLV+  F SA ER I  GD L+++++ K GI   +  L+KD
Sbjct: 205 TGHDLKQKKIEPLSQDHVEDLVRDAFTSAVERHIEVGDGLQMMIITKEGIAETFTPLKKD 264


>gi|350296725|gb|EGZ77702.1| proteasome component C5 [Neurospora tetrasperma FGSC 2509]
          Length = 265

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 79/174 (45%), Positives = 106/174 (60%), Gaps = 7/174 (4%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V++  GF AD +AL++ L A   +Y+++H K MS    AQ LS  LY KRFFPYY + +L
Sbjct: 92  VLSVVGFAADGEALKERLDAICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYYVYAIL 151

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK-----SPSPLLLPA-- 129
           GGLD EGKG VY+YD VGSYER    + G+ ++LIMPFLDNQ+       P   +  A  
Sbjct: 152 GGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPGSGVGHALQ 211

Query: 130 QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           +    PL+ +E   LVK  F  A ER I  GD L+++V+ K GI    + L+KD
Sbjct: 212 ERERKPLTRSEGEVLVKDAFDGAVERHIEVGDGLQMMVITKDGIEEVSLPLKKD 265


>gi|303313738|ref|XP_003066878.1| proteasome component, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240106545|gb|EER24733.1| proteasome component, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|320032575|gb|EFW14527.1| proteasome component C5 [Coccidioides posadasii str. Silveira]
          Length = 259

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 75/175 (42%), Positives = 105/175 (60%), Gaps = 7/175 (4%)

Query: 16  CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNV 75
            +++  GF AD +AL++ L A   +Y++ H K+MS    AQ LS  LY KRFFPYY   +
Sbjct: 85  IILSVVGFSADGQALKERLDAIVKMYEYHHGKRMSVKACAQRLSTILYSKRFFPYYVHAI 144

Query: 76  LGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA------ 129
           LGGLD +GKG +Y+YD VGSYER    + G+ ++LIMPFLDNQ+   +  +  A      
Sbjct: 145 LGGLDEDGKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNLKNQYVKSAEHGGEL 204

Query: 130 -QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            Q    PLS A A++LV+  F SA ER I  GD L+ +++   GI      L++D
Sbjct: 205 VQRTPEPLSRATALELVRDAFTSAVERHIEVGDGLQTMIITADGIEEVITPLKQD 259


>gi|336464627|gb|EGO52867.1| proteasome component C5 [Neurospora tetrasperma FGSC 2508]
          Length = 265

 Score =  140 bits (353), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 78/174 (44%), Positives = 106/174 (60%), Gaps = 7/174 (4%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V++  GF AD +AL++ L A   +Y+++H K MS    AQ LS  LY KRFFPYY + +L
Sbjct: 92  VLSVVGFAADGEALKERLDAICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYYVYAIL 151

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK-----SPSPLLLPA-- 129
           GGLD EGKG +Y+YD VGSYER    + G+ ++LIMPFLDNQ+       P   +  A  
Sbjct: 152 GGLDEEGKGAIYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPGSGVGHALQ 211

Query: 130 QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           +    PL+ +E   LVK  F  A ER I  GD L+++V+ K GI    + L+KD
Sbjct: 212 ERERKPLTRSEGEVLVKDAFDGAVERHIEVGDGLQMMVITKDGIEEVLLPLKKD 265


>gi|343426757|emb|CBQ70285.1| probable PRE7-20S proteasome subunit(beta6) [Sporisorium reilianum
           SRZ2]
          Length = 291

 Score =  140 bits (353), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 70/157 (44%), Positives = 98/157 (62%), Gaps = 2/157 (1%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +A++GF AD +AL   +  R  +Y+H H + M    +A++LS  LY KRFFPYY +
Sbjct: 78  DKATLATNGFAADAEALVSHVQQRLEMYRHAHGRSMPLHSIARMLSTILYGKRFFPYYVY 137

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N+LGGLD EGKG VY++D VGSYER    + G+  +LI PF DNQ+   + +  P +   
Sbjct: 138 NILGGLDEEGKGAVYSFDPVGSYEREFCRAAGAAQSLIQPFFDNQIMFRNQVSTPERTVP 197

Query: 134 TP--LSEAEAVDLVKTCFASATERDIYTGDKLEIVVL 168
           TP  ++  E + +V   F SATER I  GD LE+ V+
Sbjct: 198 TPGQMTLPEVLKIVVDSFTSATERHIEVGDGLEVFVV 234


>gi|221056989|ref|XP_002259632.1| Proteasome subunit beta type [Plasmodium knowlesi strain H]
 gi|193809704|emb|CAQ40406.1| Proteasome subunit beta type, putative [Plasmodium knowlesi strain
           H]
          Length = 241

 Score =  140 bits (353), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 68/171 (39%), Positives = 105/171 (61%), Gaps = 5/171 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            DKC++ SSG Q+D+K L  LL  +  ++  +H        +A+LL   LY +RFFPYY+
Sbjct: 76  TDKCIIGSSGMQSDIKTLHSLLKKKIELFVLEHGHYPDIHVIARLLCVILYSRRFFPYYT 135

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FN+L G+ N+ KG +Y YDA+GSY    +S  GSG+ LI P LDN+++  + L+      
Sbjct: 136 FNLLAGVSNDNKGVLYNYDAIGSYCEATHSCVGSGAALIFPILDNRMEQKNQLIKNLN-- 193

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
               +  + +D VK    SATERDIYTGD+ EI ++++ G+    ++L++D
Sbjct: 194 ---FNLRDDIDFVKDAITSATERDIYTGDQTEIYIIDQMGVKTTTLDLKQD 241


>gi|366989313|ref|XP_003674424.1| hypothetical protein NCAS_0A14880 [Naumovozyma castellii CBS 4309]
 gi|342300287|emb|CCC68046.1| hypothetical protein NCAS_0A14880 [Naumovozyma castellii CBS 4309]
          Length = 241

 Score =  140 bits (353), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 107/177 (60%), Gaps = 7/177 (3%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPGMAQLLSNTLYYKRFFPYY 71
            D  V++++GF AD +AL K        Y   HN K+++    A+ + + LY KRFFPYY
Sbjct: 66  GDNIVISANGFAADGEALVKRFKNSLKWYHFDHNDKKLAMSSAARNIQHLLYGKRFFPYY 125

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
              ++ GLD EGKG VY++D VGSYER    + G+ ++LIMPFLDNQ+   +    P  D
Sbjct: 126 VHTIIAGLDEEGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-YEPGTD 184

Query: 132 AVTP-----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                    L+  EA+ LV+  F SATER I+ GD LEI+++ K G+ +E+ EL++D
Sbjct: 185 GKVKRPLKYLTIEEAIKLVRDAFTSATERHIHVGDGLEILIVTKDGVRKEFFELKRD 241


>gi|392866253|gb|EAS28865.2| proteasome component C5 [Coccidioides immitis RS]
          Length = 260

 Score =  140 bits (353), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 76/175 (43%), Positives = 107/175 (61%), Gaps = 7/175 (4%)

Query: 16  CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNV 75
            +++  GF AD +AL++ L A   +Y++ H K+MS    AQ LS  LY KRFFPYY   +
Sbjct: 86  IILSVVGFSADGQALKERLDAIVKMYEYHHGKRMSVKACAQRLSTILYSKRFFPYYVHAI 145

Query: 76  LGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA--- 132
           LGGLD +GKG +Y+YD VGSYER    + G+ ++LIMPFLDNQ+   +  +  A+     
Sbjct: 146 LGGLDEDGKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNLKNQYVKSAEHGGEL 205

Query: 133 --VT--PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             VT  PLS A A++LV+  F SA ER I  GD L+ +++   GI      L++D
Sbjct: 206 VQVTPEPLSRATALELVRDAFTSAVERHIEVGDGLQTMIITADGIEEVITPLKQD 260


>gi|212543349|ref|XP_002151829.1| proteasome component Prs3, putative [Talaromyces marneffei ATCC
           18224]
 gi|210066736|gb|EEA20829.1| proteasome component Prs3, putative [Talaromyces marneffei ATCC
           18224]
          Length = 252

 Score =  140 bits (353), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 73/174 (41%), Positives = 105/174 (60%), Gaps = 7/174 (4%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V++  GF AD  AL++ L +   +Y++QH K ++    AQ LS  LY KRFFPYY++ +L
Sbjct: 79  VLSVVGFAADGHALKERLDSIVKVYRYQHGKPITVNACAQRLSTILYSKRFFPYYAYAIL 138

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA---- 132
           GGLD EG+G +Y+YD VGSYER    + G+ S+LIMPFLDNQ+   +  +  + +     
Sbjct: 139 GGLDEEGRGALYSYDPVGSYEREQCRAAGAASSLIMPFLDNQVNFKNQYIPESGEGHALE 198

Query: 133 ---VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                PL +     LV+  F SA ER I  GD L+++++ K GI   Y  L+KD
Sbjct: 199 RRTPAPLPQDTVEQLVRDAFTSAVERHIEVGDGLQMMIITKDGIQETYTPLKKD 252


>gi|119185113|ref|XP_001243373.1| hypothetical protein CIMG_07269 [Coccidioides immitis RS]
          Length = 259

 Score =  140 bits (353), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 76/175 (43%), Positives = 107/175 (61%), Gaps = 7/175 (4%)

Query: 16  CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNV 75
            +++  GF AD +AL++ L A   +Y++ H K+MS    AQ LS  LY KRFFPYY   +
Sbjct: 85  IILSVVGFSADGQALKERLDAIVKMYEYHHGKRMSVKACAQRLSTILYSKRFFPYYVHAI 144

Query: 76  LGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA--- 132
           LGGLD +GKG +Y+YD VGSYER    + G+ ++LIMPFLDNQ+   +  +  A+     
Sbjct: 145 LGGLDEDGKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNLKNQYVKSAEHGGEL 204

Query: 133 --VT--PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             VT  PLS A A++LV+  F SA ER I  GD L+ +++   GI      L++D
Sbjct: 205 VQVTPEPLSRATALELVRDAFTSAVERHIEVGDGLQTMIITADGIEEVITPLKQD 259


>gi|242786404|ref|XP_002480798.1| proteasome component Prs3, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218720945|gb|EED20364.1| proteasome component Prs3, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 253

 Score =  140 bits (353), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 74/174 (42%), Positives = 104/174 (59%), Gaps = 7/174 (4%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V++  GF AD +AL++ L +   +Y++QH K +S    AQ LS  LY KRFFPYY+  +L
Sbjct: 80  VLSVVGFAADGQALKERLDSIVKVYRYQHGKPISVKACAQRLSTILYSKRFFPYYAHAIL 139

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA---- 132
           GGLD EG+G +Y+YD VGSYER    + G+ S+LIMPFLDNQ+   +  +  + +     
Sbjct: 140 GGLDEEGRGALYSYDPVGSYEREQCRAAGAASSLIMPFLDNQVNFKNQYIPGSGEGHALE 199

Query: 133 ---VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                PL       LV+  F SA ER I  GD L+++++ K GI   Y  L+KD
Sbjct: 200 RRTPAPLPRDTVEQLVRDAFTSAVERHIEVGDGLQMMIITKDGIQESYTPLKKD 253


>gi|190348096|gb|EDK40488.2| hypothetical protein PGUG_04586 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 242

 Score =  140 bits (353), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 105/177 (59%), Gaps = 7/177 (3%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPGMAQLLSNTLYYKRFFPYY 71
            D  VM ++GF AD  AL          Y+  HN K++S    A+ + + LY KRFFPYY
Sbjct: 67  GDNIVMTANGFDADGAALIDRFRNSLKWYKFDHNGKRLSISSAARYIQHLLYGKRFFPYY 126

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
              ++ GLD+EG+G VY+YD VGSYER    + G+ ++LIMPFLDNQ+   +   +P  D
Sbjct: 127 VSTLIAGLDDEGRGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-YVPGSD 185

Query: 132 A-----VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                 +  LS  E + LV+  F SATER IY GD LEI+++ K G+  EY  L++D
Sbjct: 186 GKKKKELRYLSLEEVIQLVRDAFTSATERHIYVGDGLEILIVTKEGVRTEYFPLKRD 242


>gi|344249385|gb|EGW05489.1| Proteasome subunit beta type-1 [Cricetulus griseus]
          Length = 140

 Score =  140 bits (352), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 68/144 (47%), Positives = 93/144 (64%), Gaps = 4/144 (2%)

Query: 40  IYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERV 99
           +Y+H +NK M+   +A +LS  LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R 
Sbjct: 1   MYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRD 60

Query: 100 GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYT 159
            + + GS S ++ P LDNQ+   +   +       PLS   A+ LVK  F SA ERD+YT
Sbjct: 61  SFKAGGSASAMLQPLLDNQVGFKNMQNVEH----VPLSLDRAMRLVKDVFISAAERDVYT 116

Query: 160 GDKLEIVVLNKGGIHREYMELRKD 183
           GD L I ++ K GI  E + LRKD
Sbjct: 117 GDALRICIVTKEGIREETVPLRKD 140


>gi|398395515|ref|XP_003851216.1| proteasome core particle subunit beta 6 [Zymoseptoria tritici
           IPO323]
 gi|339471095|gb|EGP86192.1| hypothetical protein MYCGRDRAFT_105119 [Zymoseptoria tritici
           IPO323]
          Length = 264

 Score =  140 bits (352), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 79/179 (44%), Positives = 108/179 (60%), Gaps = 13/179 (7%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           + V++  GF AD  AL++ L     +Y++QH K M     AQ LS+ LY KRFFP+Y   
Sbjct: 89  RIVLSVVGFAADGHALKERLDTVVKMYKYQHGKDMPVHACAQRLSHILYGKRFFPFYVTA 148

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ--LKSPSPLLLPAQD- 131
           +LGG+D+EGKG +Y+YD VGSYER    + G+ ++LIMPFLDNQ  LK+ +    PAQ  
Sbjct: 149 ILGGIDDEGKGALYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNLKNQTD---PAQPQ 205

Query: 132 -------AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                     PLS     +LV+  F SA ER I  GD L+++V+ K G+   Y EL+KD
Sbjct: 206 GLEKVGLVPKPLSREHVEELVRDAFTSAVERHIEVGDGLQLMVITKEGVVETYSELKKD 264


>gi|169769575|ref|XP_001819257.1| proteasome component C5 [Aspergillus oryzae RIB40]
 gi|238488110|ref|XP_002375293.1| proteasome component Prs3, putative [Aspergillus flavus NRRL3357]
 gi|83767116|dbj|BAE57255.1| unnamed protein product [Aspergillus oryzae RIB40]
 gi|220700172|gb|EED56511.1| proteasome component Prs3, putative [Aspergillus flavus NRRL3357]
          Length = 261

 Score =  140 bits (352), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 76/175 (43%), Positives = 102/175 (58%), Gaps = 7/175 (4%)

Query: 16  CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNV 75
            +++  GF AD +AL++ L A   +Y++QH K MS    AQ LS  LY KRFFPYY   +
Sbjct: 87  IILSVVGFAADGQALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVHAI 146

Query: 76  LGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA--- 132
           L GLD EGKG +Y+YD VGSYER    + GS ++LIMPFLDNQ+   +  +  + D    
Sbjct: 147 LAGLDEEGKGALYSYDPVGSYEREQCRAAGSAASLIMPFLDNQVNFKNQYIPSSGDGHAL 206

Query: 133 ----VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                 PL       LV+  F SA ER I  GD L+++V+ + GI   Y  L+KD
Sbjct: 207 EPKKPEPLPRETVEQLVRDAFTSAVERHIEVGDGLQMMVITQNGIEEIYTPLKKD 261


>gi|367020378|ref|XP_003659474.1| hypothetical protein MYCTH_2296573 [Myceliophthora thermophila ATCC
           42464]
 gi|347006741|gb|AEO54229.1| hypothetical protein MYCTH_2296573 [Myceliophthora thermophila ATCC
           42464]
          Length = 265

 Score =  140 bits (352), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 77/174 (44%), Positives = 105/174 (60%), Gaps = 7/174 (4%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V++  GF AD +AL++ L A   +Y+++H K MS    AQ LS  LY KRFFPYY+  +L
Sbjct: 92  VLSVVGFAADGEALKERLDAICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYYTHAIL 151

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA---- 132
           GGLD EGKG VY+YD VGSYER    + G+ ++LIMPFLDNQ+   +  +  + +     
Sbjct: 152 GGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYVPNSGEGHALQ 211

Query: 133 ---VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                PL+ +E   LVK  F  A ER I  GD L+I+ + K GI    + L+KD
Sbjct: 212 ERKRRPLTRSEVEVLVKDAFDGAVERHIEVGDGLQIMTITKDGIEEITLPLKKD 265


>gi|146186065|ref|XP_001032955.2| Proteasome A-type and B-type family protein [Tetrahymena
           thermophila]
 gi|146143157|gb|EAR85292.2| Proteasome A-type and B-type family protein [Tetrahymena
           thermophila SB210]
          Length = 247

 Score =  140 bits (352), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 77/171 (45%), Positives = 102/171 (59%), Gaps = 6/171 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   +A+SG  AD  AL K L+AR  +Y++ + KQ +   +A LLS TLYYKRFFPYY+F
Sbjct: 82  DNVFLATSGMYADFAALSKQLSARLHMYKYNNGKQANMRAIASLLSRTLYYKRFFPYYTF 141

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N+L G D++G+G V  YDAVGS +   Y+  GSG+ LI P  D   +  + +       V
Sbjct: 142 NLLAGFDDKGEGLVINYDAVGSGDFKKYAVLGSGAQLITPVFDQYFEGYNKIKKEQLHTV 201

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKG-GIHREYMELRKD 183
                 E +  +  CF SATERDIYTGD+LEIV+L K      +   LRKD
Sbjct: 202 E-----EFISFIVDCFESATERDIYTGDQLEIVILRKDKAPEYQLFPLRKD 247


>gi|344229599|gb|EGV61484.1| N-terminal nucleophile aminohydrolase [Candida tenuis ATCC 10573]
          Length = 242

 Score =  139 bits (351), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 78/176 (44%), Positives = 104/176 (59%), Gaps = 5/176 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPGMAQLLSNTLYYKRFFPYY 71
            D  VM ++GF AD KAL      +   Y+  HN K+ S    A+ + + LY KRFFPYY
Sbjct: 67  GDDIVMTANGFAADGKALINSFKTQLKWYKFDHNDKRFSIQSAARYIRHLLYGKRFFPYY 126

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
              ++ GLD+EGKGCVY++D VGSYER    + GS S+LIMPFLDNQ+   +     +  
Sbjct: 127 VSTLIAGLDDEGKGCVYSFDPVGSYEREQCRAGGSASSLIMPFLDNQVNFKNQYEPDSDG 186

Query: 132 AVTP----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            V      L   E ++LVK  F+SATER I  GD LEI ++ K G+  EY  L++D
Sbjct: 187 KVKKPLRYLELDEVLELVKDAFSSATERHIQVGDGLEIHIVTKEGVRVEYFPLKRD 242


>gi|194750661|ref|XP_001957648.1| GF10515 [Drosophila ananassae]
 gi|190624930|gb|EDV40454.1| GF10515 [Drosophila ananassae]
          Length = 235

 Score =  139 bits (351), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 71/171 (41%), Positives = 104/171 (60%), Gaps = 2/171 (1%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           +D+ V+ S+G  AD  +L  LL  R   Y+H H + M+   +AQ+LS T+Y +RFFPYY 
Sbjct: 67  SDQTVLGSTGCWADTLSLTGLLKVRMQGYEHTHLRTMATDAVAQMLSITMYNRRFFPYYV 126

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            N+L G+D +GKG VY+YD +G  ER  Y + G+  TL+ P LDNQ+   +  L  ++  
Sbjct: 127 SNILAGIDKDGKGVVYSYDPIGHCERAFYRAGGTAGTLLQPVLDNQIGHKNINLSSSE-- 184

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           +  L+   AV +    F SA ERDIYTGD + I ++ K GI  + ++LR D
Sbjct: 185 LPKLTIERAVAIASDTFISAAERDIYTGDSVLINIITKDGIEEKKLQLRLD 235


>gi|70991375|ref|XP_750536.1| proteasome component Prs3 [Aspergillus fumigatus Af293]
 gi|66848169|gb|EAL88498.1| proteasome component Prs3, putative [Aspergillus fumigatus Af293]
          Length = 261

 Score =  139 bits (351), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 76/169 (44%), Positives = 100/169 (59%), Gaps = 7/169 (4%)

Query: 22  GFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDN 81
           GF AD +AL++ L A   +Y++QH K MS    AQ LS  LY KRFFPYY   +L GLD 
Sbjct: 93  GFAADGQALKERLDAVVRMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVHAILAGLDE 152

Query: 82  EGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA-------VT 134
           EGKG +Y+YD VGSYER    + GS ++LIMPFLDNQ+   +  +  + +          
Sbjct: 153 EGKGALYSYDPVGSYEREQCRAAGSAASLIMPFLDNQVNFKNQYIPGSGEGHALEPKKAE 212

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           PL  A    LV+  F SA ER I  GD L+++V+ + GI   Y  L+KD
Sbjct: 213 PLPRATVEQLVRDAFTSAVERHIEVGDGLQMMVITQRGIEEIYTPLKKD 261


>gi|159124092|gb|EDP49210.1| proteasome component Prs3, putative [Aspergillus fumigatus A1163]
          Length = 261

 Score =  139 bits (350), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 76/169 (44%), Positives = 100/169 (59%), Gaps = 7/169 (4%)

Query: 22  GFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDN 81
           GF AD +AL++ L A   +Y++QH K MS    AQ LS  LY KRFFPYY   +L GLD 
Sbjct: 93  GFAADGQALKERLDAVVRMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVHAILAGLDE 152

Query: 82  EGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA-------VT 134
           EGKG +Y+YD VGSYER    + GS ++LIMPFLDNQ+   +  +  + +          
Sbjct: 153 EGKGALYSYDPVGSYEREQCRAAGSAASLIMPFLDNQVNFKNQYIPGSGEGHALEPKKAE 212

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           PL  A    LV+  F SA ER I  GD L+++V+ + GI   Y  L+KD
Sbjct: 213 PLPRATVEQLVRDAFTSAVERHIEVGDGLQMMVITQRGIEEIYTPLKKD 261


>gi|189193569|ref|XP_001933123.1| proteasome subunit beta type-1 precursor [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187978687|gb|EDU45313.1| proteasome subunit beta type-1 precursor [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 264

 Score =  139 bits (350), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 77/180 (42%), Positives = 107/180 (59%), Gaps = 9/180 (5%)

Query: 12  RADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYY 71
           +  + V++  GF AD  AL++ L     +Y++QH K MS    AQ LS+ LY KRFFPYY
Sbjct: 86  KGARIVLSVVGFAADGDALKERLDTIVKMYKYQHGKPMSVSACAQRLSHILYNKRFFPYY 145

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK--------SPS 123
              +LGGLD EGKG +Y+YD VGSYER    + G+ ++LIMPFLDNQ+         S +
Sbjct: 146 VHAILGGLDEEGKGALYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNFKNMYEPGSGT 205

Query: 124 PLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              L ++ A  PL      DLV+  F SA ER I  GD L+++++ K GI   +  L++D
Sbjct: 206 GHELKSKQA-QPLPRDHVEDLVRDAFTSAVERHIEVGDGLQMMIITKDGIAETFTPLKRD 264


>gi|255938694|ref|XP_002560117.1| Pc14g01230 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211584738|emb|CAP74264.1| Pc14g01230 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 259

 Score =  139 bits (350), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 76/178 (42%), Positives = 103/178 (57%), Gaps = 11/178 (6%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
             +++  GF AD  AL++ L     +Y++QH K MS    AQ LS  LY KRFFPYY   
Sbjct: 84  NIILSVVGFAADGNALKEKLDTMVRMYKYQHGKSMSVGACAQRLSTILYEKRFFPYYVHA 143

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSP---------L 125
           +L GLD EG G +Y+YD VGSYER    + G+ S+LIMPFLDNQ+ S +           
Sbjct: 144 ILAGLDEEGVGALYSYDPVGSYEREQCRAAGAASSLIMPFLDNQVNSKNQYIPGSGEGHA 203

Query: 126 LLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           L+P +    PL +  A  LVK  F SA ER I  GD L++V++ + GI   +  L++D
Sbjct: 204 LVPKK--AEPLDKETATKLVKDAFTSAVERHIEVGDGLQLVIVTREGIEEVFHALKQD 259


>gi|146415774|ref|XP_001483857.1| hypothetical protein PGUG_04586 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 242

 Score =  139 bits (350), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 105/177 (59%), Gaps = 7/177 (3%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPGMAQLLSNTLYYKRFFPYY 71
            D  VM ++GF AD  AL          Y+  HN K++S    A+ + + LY KRFFPYY
Sbjct: 67  GDNIVMTANGFDADGAALIDRFRNSLKWYKFDHNGKRLSILSAARYIQHLLYGKRFFPYY 126

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
              ++ GLD+EG+G VY+YD VGSYER    + G+ ++LIMPFLDNQ+   +   +P  D
Sbjct: 127 VSTLIAGLDDEGRGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-YVPGSD 185

Query: 132 A-----VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                 +  LS  E + LV+  F SATER IY GD LEI+++ K G+  EY  L++D
Sbjct: 186 GKKKKELRYLSLEEVIQLVRDAFTSATERHIYVGDGLEILIVTKEGVRTEYFPLKRD 242


>gi|302309124|ref|NP_986343.2| AGL324Wp [Ashbya gossypii ATCC 10895]
 gi|299788212|gb|AAS54167.2| AGL324Wp [Ashbya gossypii ATCC 10895]
 gi|374109588|gb|AEY98493.1| FAGL324Wp [Ashbya gossypii FDAG1]
          Length = 243

 Score =  139 bits (350), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 73/175 (41%), Positives = 105/175 (60%), Gaps = 4/175 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            D  +++++GF AD  AL K        Y+  HNK+M+    A+ + + LY KR FPYY 
Sbjct: 69  GDNILISANGFAADGDALVKRFKNSMKWYRFDHNKKMTIKSAARSIQHLLYGKRMFPYYV 128

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA--- 129
             ++ GLD EGKG VY+YD VGSYER    + G+ ++LIMPFLDNQ+   +     +   
Sbjct: 129 HTIIAGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPDSNGT 188

Query: 130 -QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            + A+  LS  E V LV+  F SATER I+ GD L+I+++ K G+  E+  L+KD
Sbjct: 189 KKRALRFLSVDEVVRLVRDAFTSATERHIHVGDGLQIMIVTKDGVREEFYSLKKD 243


>gi|195441689|ref|XP_002068635.1| GK20318 [Drosophila willistoni]
 gi|194164720|gb|EDW79621.1| GK20318 [Drosophila willistoni]
          Length = 233

 Score =  139 bits (350), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 73/171 (42%), Positives = 103/171 (60%), Gaps = 2/171 (1%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           ++  V+ S+G  +D  +L  LL  R  +Y+H H K MS   +AQ+LS T+Y +RFFPYY 
Sbjct: 65  SENSVLGSTGCWSDTLSLTGLLKVRMQMYEHTHLKVMSTDALAQMLSITMYNRRFFPYYV 124

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            N+L G+D +GKG VY+YD +G  ER  Y + G+   L+ P LDNQ+   +  L  +QD 
Sbjct: 125 SNILAGVDKDGKGVVYSYDPIGHCERATYRAGGTAGPLLQPVLDNQIGYKNQNL--SQDE 182

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           +  LS   AV +    F SA ERDIYTGD + I ++ K  I  + + LRKD
Sbjct: 183 LPKLSIDRAVAVAFDTFISAAERDIYTGDSVIINIITKDEIKSQELPLRKD 233


>gi|149047100|gb|EDL99820.1| proteasome (prosome, macropain) subunit, beta type 1, isoform CRA_b
           [Rattus norvegicus]
 gi|149047101|gb|EDL99821.1| proteasome (prosome, macropain) subunit, beta type 1, isoform CRA_b
           [Rattus norvegicus]
          Length = 140

 Score =  139 bits (350), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 68/145 (46%), Positives = 94/145 (64%), Gaps = 6/145 (4%)

Query: 40  IYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERV 99
           +Y+H +NK M+   +A +LS  LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R 
Sbjct: 1   MYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRD 60

Query: 100 GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIY 158
            + + GS S ++ P LDNQ+   +      Q+    PL+   A+ LVK  F SA ERD+Y
Sbjct: 61  SFKAGGSASAMLQPLLDNQVGFKN-----MQNVEHVPLTLDRAMRLVKDVFISAAERDVY 115

Query: 159 TGDKLEIVVLNKGGIHREYMELRKD 183
           TGD L I ++ K GI  E + LRKD
Sbjct: 116 TGDALRICIVTKEGIREETVPLRKD 140


>gi|119467908|ref|XP_001257760.1| proteasome component Prs3, putative [Neosartorya fischeri NRRL 181]
 gi|119405912|gb|EAW15863.1| proteasome component Prs3, putative [Neosartorya fischeri NRRL 181]
          Length = 261

 Score =  139 bits (350), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 76/169 (44%), Positives = 100/169 (59%), Gaps = 7/169 (4%)

Query: 22  GFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDN 81
           GF AD +AL++ L A   +Y++QH K MS    AQ LS  LY KRFFPYY   +L GLD 
Sbjct: 93  GFAADGQALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVHAILAGLDE 152

Query: 82  EGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA-------VT 134
           EGKG +Y+YD VGSYER    + GS ++LIMPFLDNQ+   +  +  + +          
Sbjct: 153 EGKGALYSYDPVGSYEREQCRAAGSAASLIMPFLDNQVNFKNQYIPGSGEGHALEPKKAE 212

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           PL  A    LV+  F SA ER I  GD L+++V+ + GI   Y  L+KD
Sbjct: 213 PLPRATVEQLVRDAFTSAVERHIEVGDGLQMMVITQRGIEEIYTPLKKD 261


>gi|330914581|ref|XP_003296697.1| hypothetical protein PTT_06863 [Pyrenophora teres f. teres 0-1]
 gi|311331038|gb|EFQ95204.1| hypothetical protein PTT_06863 [Pyrenophora teres f. teres 0-1]
          Length = 264

 Score =  139 bits (350), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 77/180 (42%), Positives = 107/180 (59%), Gaps = 9/180 (5%)

Query: 12  RADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYY 71
           +  + V++  GF AD  AL++ L     +Y++QH K MS    AQ LS+ LY KRFFPYY
Sbjct: 86  KGARIVLSVVGFAADGDALKERLDTIVKMYKYQHGKPMSVSACAQRLSHILYNKRFFPYY 145

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK--------SPS 123
              +LGGLD EGKG +Y+YD VGSYER    + G+ ++LIMPFLDNQ+         S +
Sbjct: 146 VHAILGGLDEEGKGALYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNFKNMYEPGSGT 205

Query: 124 PLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              L ++ A  PL      DLV+  F SA ER I  GD L+++++ K GI   +  L++D
Sbjct: 206 GHELKSKQA-QPLPRDHVEDLVRDAFTSAVERHIEVGDGLQMMIITKEGIAETFTPLKRD 264


>gi|451848862|gb|EMD62167.1| hypothetical protein COCSADRAFT_38952 [Cochliobolus sativus ND90Pr]
          Length = 264

 Score =  139 bits (349), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 76/183 (41%), Positives = 108/183 (59%), Gaps = 9/183 (4%)

Query: 9   TSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFF 68
           +  +  + V++  GF AD  AL++ L     +Y++QH K M+    AQ LS+ LY KRFF
Sbjct: 83  SDSKGARIVLSVVGFAADAHALKERLDTIVKMYKYQHGKPMTVSACAQRLSHILYNKRFF 142

Query: 69  PYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK-----SPS 123
           PYY   +LGGLD +GKG +Y+YD VGSYER    + G+ ++LIMPFLDNQ+       P 
Sbjct: 143 PYYVHAILGGLDEDGKGALYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNFKNMYEPG 202

Query: 124 PLL---LPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMEL 180
             +   L ++ A  PL      DLV+  F SA ER I  GD L+++++ K GI   Y  L
Sbjct: 203 SGVGHELKSKQA-EPLPRDHVEDLVRDAFTSAVERHIEVGDGLQMMIITKEGIAETYTPL 261

Query: 181 RKD 183
           ++D
Sbjct: 262 KRD 264


>gi|302922344|ref|XP_003053446.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256734387|gb|EEU47733.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 264

 Score =  139 bits (349), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 74/174 (42%), Positives = 103/174 (59%), Gaps = 7/174 (4%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V++  GF AD +AL+  L     IY+++H K M+    A+ LS  LY KRFFPYYS  +L
Sbjct: 91  VLSVVGFAADGEALRDHLDTICKIYRYRHGKPMTVNACAKRLSTVLYGKRFFPYYSHAML 150

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA---- 132
           GGLD EGKG VY+YD VGSYER    + G+  +LIMPFLDNQ+   +  +  + +     
Sbjct: 151 GGLDEEGKGAVYSYDPVGSYEREQCRAGGAAGSLIMPFLDNQVNFKNQYIPESGEGHELK 210

Query: 133 ---VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                PL+  E   L+K  F  A ER I  GD L++V++ + GI   ++ L+KD
Sbjct: 211 ERERRPLTRTEVETLIKDAFDGAVERHIEVGDNLQMVIITRDGIEETFIPLKKD 264


>gi|71018283|ref|XP_759372.1| hypothetical protein UM03225.1 [Ustilago maydis 521]
 gi|46099097|gb|EAK84330.1| hypothetical protein UM03225.1 [Ustilago maydis 521]
          Length = 356

 Score =  139 bits (349), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 69/158 (43%), Positives = 97/158 (61%), Gaps = 2/158 (1%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +A++GF AD +AL   +  R  +Y+H H + M    +A+++S  LY KRFFPYY +
Sbjct: 143 DKATLATNGFAADAEALVSHVRQRLEMYRHAHGRSMPLHSIARMISTILYGKRFFPYYVY 202

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N+LGGLD EGKG VY++D VGSYER    + G+  +LI PF DNQ+   +    P +   
Sbjct: 203 NILGGLDEEGKGAVYSFDPVGSYEREFCRAAGAAQSLIQPFFDNQIMFRNQTSTPERTVP 262

Query: 134 TP--LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 169
           TP  ++  E + +V   F SATER I  GD LE+ V+ 
Sbjct: 263 TPGQMTLGEVLKIVVDSFTSATERHIEVGDGLEVFVVR 300


>gi|68060726|ref|XP_672353.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56489346|emb|CAI05284.1| hypothetical protein PB300285.00.0 [Plasmodium berghei]
          Length = 237

 Score =  139 bits (349), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 74/196 (37%), Positives = 113/196 (57%), Gaps = 30/196 (15%)

Query: 13  ADKCVMASSGFQADVKALQKLLAAR---HLIYQH----------------------QHNK 47
            DKC++ SSG Q+D+K L  LL       L+Y +                      +H+ 
Sbjct: 47  TDKCIIGSSGMQSDIKTLHSLLQVLLKIFLLYNYYCCNLIIFFSKILQKKIQLFYLEHSH 106

Query: 48  QMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 107
             S   +A+LL  TLY +RFFPYY+FN+L G+D  GKG +Y+YDA+GSY +  ++  GSG
Sbjct: 107 YPSIHVIAKLLCVTLYSRRFFPYYTFNILAGIDENGKGVLYSYDAIGSYYQSTHACTGSG 166

Query: 108 STLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVV 167
           S+LI+P LDN+++  + L+          +  + ++ VK    SATERDIYTGDK EI +
Sbjct: 167 SSLILPILDNRVEQKNQLIKNMD-----FNLRDDINFVKDAMTSATERDIYTGDKAEIYI 221

Query: 168 LNKGGIHREYMELRKD 183
           ++  GI+   ++L++D
Sbjct: 222 IDNLGINTTLLDLKQD 237


>gi|260941638|ref|XP_002614985.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
 gi|238851408|gb|EEQ40872.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
          Length = 241

 Score =  139 bits (349), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 103/177 (58%), Gaps = 7/177 (3%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPGMAQLLSNTLYYKRFFPYY 71
            D  VM ++GF AD  AL     +    Y+  HN K+++    A+ + + LY KRFFPYY
Sbjct: 66  GDNIVMTANGFAADGAALIDQFRSSFKWYKFDHNNKKLTIRSAARYIQHLLYGKRFFPYY 125

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
              ++ GLD EGKG VY+YD VGSYER    + G+ ++LIMPFLDNQ+   +    P  D
Sbjct: 126 VSTLIAGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-YEPGSD 184

Query: 132 AVTP-----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                    L   E + LVK  F+SATER IY GD LEI ++ K G+ +EY  L++D
Sbjct: 185 GTKKKELRYLKLDEVLQLVKDAFSSATERHIYVGDGLEIFIVTKDGVRKEYYPLKRD 241


>gi|121709884|ref|XP_001272558.1| proteasome component Prs3, putative [Aspergillus clavatus NRRL 1]
 gi|119400708|gb|EAW11132.1| proteasome component Prs3, putative [Aspergillus clavatus NRRL 1]
          Length = 261

 Score =  138 bits (348), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 74/176 (42%), Positives = 104/176 (59%), Gaps = 7/176 (3%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           + +++  GF AD +AL++ L A   +Y++QH K MS    AQ LS  LY KRFFPYY   
Sbjct: 86  RILLSVVGFAADGQALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVHA 145

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA-- 132
           +L GLD EGKG +Y+YD VGSYER    + GS ++LIMPFLDNQ+   +  +  + +   
Sbjct: 146 ILAGLDEEGKGALYSYDPVGSYEREQCRAAGSAASLIMPFLDNQVNFKNQYIPGSGEGHA 205

Query: 133 -----VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                  PL       LV+  F SA ER I  GD L+++V+ + GI   ++ L+KD
Sbjct: 206 LEPKKAEPLPRGTVEQLVRDAFTSAVERHIEVGDGLQMMVITESGIEEIFIPLKKD 261


>gi|402222920|gb|EJU02985.1| N-terminal nucleophile aminohydrolase [Dacryopinax sp. DJM-731 SS1]
          Length = 259

 Score =  138 bits (348), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 69/163 (42%), Positives = 100/163 (61%), Gaps = 6/163 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+ V+A +GFQAD     K +  R   Y+H H+KQM    +A+++   LY KRFFPYY++
Sbjct: 65  DRAVLAVNGFQADCSTFVKKVKQRIEWYRHAHSKQMPLKAIARMIQGMLYGKRFFPYYTY 124

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL----KSPSPLLLPA 129
           N+LGG++ +G G VY++D VGSYER    + G+ S+LI PFLDNQ+    ++P+P   P 
Sbjct: 125 NILGGIEEDGTGAVYSFDPVGSYEREACRAAGAASSLIQPFLDNQIYFKNQTPAPGAAPF 184

Query: 130 QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
           +    P+     + +V   F SATER I  GD LE+ V+   G
Sbjct: 185 EPGNLPMD--TVLSIVIDSFTSATERHIEVGDGLEMFVVVAPG 225


>gi|451998685|gb|EMD91149.1| hypothetical protein COCHEDRAFT_90180 [Cochliobolus heterostrophus
           C5]
          Length = 264

 Score =  138 bits (348), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 74/180 (41%), Positives = 104/180 (57%), Gaps = 9/180 (5%)

Query: 12  RADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYY 71
           +  + V++  GF AD  AL++ L     +Y++QH K M+    AQ LS+ LY KRFFPYY
Sbjct: 86  KGARIVLSVVGFAADAHALKERLDTIVKMYKYQHGKPMTVSACAQRLSHILYNKRFFPYY 145

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
              +LGGLD +GKG +Y+YD VGSYER    + G+ ++LIMPFLDNQ+   + +  P   
Sbjct: 146 VHAILGGLDEDGKGALYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNFKN-MYEPGSG 204

Query: 132 A--------VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                      PL      DLV+  F SA ER I  GD L+++++ K GI   Y  L++D
Sbjct: 205 VGHELKSKQAEPLPRDHVEDLVRDAFTSAVERHIEVGDGLQMMIITKDGIAETYTPLKRD 264


>gi|410075834|ref|XP_003955499.1| hypothetical protein KAFR_0B00650 [Kazachstania africana CBS 2517]
 gi|372462082|emb|CCF56364.1| hypothetical protein KAFR_0B00650 [Kazachstania africana CBS 2517]
          Length = 241

 Score =  138 bits (348), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 106/177 (59%), Gaps = 7/177 (3%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPGMAQLLSNTLYYKRFFPYY 71
            D  V++++GF AD +AL K        Y   HN K++S    A+ + + LY KRFFPYY
Sbjct: 66  GDNIVISANGFAADGEALVKRFKNSIKWYHFDHNDKKLSIKSAARNIQHLLYGKRFFPYY 125

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
              ++ GLD EGKG VY++D VGSYER    + G+ ++LIMPFLDNQ+   +    P  D
Sbjct: 126 VHTIIAGLDEEGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-YEPGSD 184

Query: 132 AVTP-----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                    L+  E + LV+  F SATER I+ GD LEI+++ K G+ +EY +L++D
Sbjct: 185 GKVKRPLKYLNIDEVISLVRDAFTSATERHIHVGDGLEILIVTKEGVRKEYYDLKRD 241


>gi|453081972|gb|EMF10020.1| N-terminal nucleophile aminohydrolase [Mycosphaerella populorum
           SO2202]
          Length = 255

 Score =  138 bits (348), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 78/182 (42%), Positives = 103/182 (56%), Gaps = 19/182 (10%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           K V++  GF AD  AL++ L     +Y++QH K +S    AQ LS+ LY KRFFPYY   
Sbjct: 80  KIVLSVVGFAADGHALKERLDTVVKMYKYQHGKDISIGACAQRLSHILYGKRFFPYYVTA 139

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK-------------S 121
           +LGG+D +GKG +Y+YD VGSYER    + G+ S+LIMPFLDNQ+              S
Sbjct: 140 ILGGIDEDGKGALYSYDPVGSYEREQCRAAGAASSLIMPFLDNQVNLKNQYDPTQPQGFS 199

Query: 122 PSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELR 181
             PL+        PL       LVK  F SA ER I  GD L+ +++ K GI   Y +L+
Sbjct: 200 KEPLV------AKPLDRQHVESLVKDAFTSAVERHIEVGDGLQTMIITKDGILETYADLK 253

Query: 182 KD 183
           KD
Sbjct: 254 KD 255


>gi|164657003|ref|XP_001729628.1| hypothetical protein MGL_3172 [Malassezia globosa CBS 7966]
 gi|159103521|gb|EDP42414.1| hypothetical protein MGL_3172 [Malassezia globosa CBS 7966]
          Length = 257

 Score =  138 bits (348), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 73/166 (43%), Positives = 96/166 (57%), Gaps = 20/166 (12%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +A++GF AD +AL   +  R  +YQH H + M    +A++LS  LY KRFFPYY +
Sbjct: 53  DKATLATNGFAADAEALVARVKTRLEMYQHTHGRSMPLHAIARMLSTILYSKRFFPYYVY 112

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL-----------KSP 122
           N+LGG+D EG+G VY YD VGSYER+   + G+   L+ PFLDNQ+           K P
Sbjct: 113 NILGGIDEEGRGAVYGYDPVGSYERIVCCASGAAQGLLQPFLDNQVMFKNLNSTAETKIP 172

Query: 123 SPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVL 168
            P  LP Q          A+ +V   F SATER I  GD LE+ V+
Sbjct: 173 EPGHLPLQ---------HALRIVMDSFTSATERHIEVGDGLEVFVV 209


>gi|68065946|ref|XP_674957.1| proteasome subunit beta type 1 [Plasmodium berghei strain ANKA]
 gi|56493858|emb|CAI00630.1| proteasome subunit beta type 1, putative [Plasmodium berghei]
          Length = 267

 Score =  138 bits (348), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 74/196 (37%), Positives = 113/196 (57%), Gaps = 30/196 (15%)

Query: 13  ADKCVMASSGFQADVKALQKLLAAR---HLIYQH----------------------QHNK 47
            DKC++ SSG Q+D+K L  LL       L+Y +                      +H+ 
Sbjct: 77  TDKCIIGSSGMQSDIKTLHSLLQVLLKIFLLYNYYCCNLIIFFSKILQKKIQLFYLEHSH 136

Query: 48  QMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSG 107
             S   +A+LL  TLY +RFFPYY+FN+L G+D  GKG +Y+YDA+GSY +  ++  GSG
Sbjct: 137 YPSIHVIAKLLCVTLYSRRFFPYYTFNILAGIDENGKGVLYSYDAIGSYYQSTHACTGSG 196

Query: 108 STLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVV 167
           S+LI+P LDN+++  + L+          +  + ++ VK    SATERDIYTGDK EI +
Sbjct: 197 SSLILPILDNRVEQKNQLIKNMD-----FNLRDDINFVKDAMTSATERDIYTGDKAEIYI 251

Query: 168 LNKGGIHREYMELRKD 183
           ++  GI+   ++L++D
Sbjct: 252 IDNLGINTTLLDLKQD 267


>gi|391863506|gb|EIT72814.1| 20S proteasome, regulatory subunit beta type PSMB1/PRE7
           [Aspergillus oryzae 3.042]
          Length = 261

 Score =  138 bits (348), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 75/175 (42%), Positives = 102/175 (58%), Gaps = 7/175 (4%)

Query: 16  CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNV 75
            +++  GF AD +AL++ L A   +Y++QH K MS    AQ LS  LY KRFFPYY   +
Sbjct: 87  IILSVVGFAADGQALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVHAI 146

Query: 76  LGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA--- 132
           L GLD EG+G +Y+YD VGSYER    + GS ++LIMPFLDNQ+   +  +  + D    
Sbjct: 147 LAGLDEEGEGALYSYDPVGSYEREQCRAAGSAASLIMPFLDNQVNFKNQYIPSSGDGHAL 206

Query: 133 ----VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                 PL       LV+  F SA ER I  GD L+++V+ + GI   Y  L+KD
Sbjct: 207 EPKKPEPLPRETVEQLVRDAFTSAVERHIEVGDGLQMMVITQNGIEEIYTPLKKD 261


>gi|365990732|ref|XP_003672195.1| hypothetical protein NDAI_0J00600 [Naumovozyma dairenensis CBS 421]
 gi|343770970|emb|CCD26952.1| hypothetical protein NDAI_0J00600 [Naumovozyma dairenensis CBS 421]
          Length = 241

 Score =  138 bits (348), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 105/177 (59%), Gaps = 7/177 (3%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPGMAQLLSNTLYYKRFFPYY 71
            D  V++++GF AD +AL K        Y   HN K++S    A+ + + LY KRFFPYY
Sbjct: 66  GDNIVISANGFAADGEALVKRFKNSLKWYHFDHNDKKLSMKSAARNIQHLLYGKRFFPYY 125

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
              ++ GLD  GKG VY++D VGSYER    + G+ ++LIMPFLDNQ+   +    P  D
Sbjct: 126 VHTIIAGLDENGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-FEPGTD 184

Query: 132 AVTP-----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                    LS  E + LV+  F SATER I+ GD LEI+++ K G+ +E+ EL++D
Sbjct: 185 GKVKKPLKYLSIDEVIKLVRDSFTSATERHIHVGDGLEILIVTKDGVRKEFYELKRD 241


>gi|396457904|ref|XP_003833565.1| similar to proteasome subunit beta type-1-A [Leptosphaeria maculans
           JN3]
 gi|312210113|emb|CBX90200.1| similar to proteasome subunit beta type-1-A [Leptosphaeria maculans
           JN3]
          Length = 264

 Score =  138 bits (347), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 78/177 (44%), Positives = 104/177 (58%), Gaps = 9/177 (5%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           + V++  GF AD  AL++ L     +Y++QH K MS    AQ LS+ LY KRFFPYY   
Sbjct: 89  RIVLSVVGFAADGDALKERLDTIVKMYKYQHGKPMSVSACAQRLSHILYNKRFFPYYVHA 148

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK-----SPSPLL--- 126
           +L GLD EGKG +Y+YD VGSYER    + G+ S+LIMPFLDNQ+       P   +   
Sbjct: 149 ILAGLDEEGKGALYSYDPVGSYEREQCRAAGAASSLIMPFLDNQVNFKNMYEPGSGVGHE 208

Query: 127 LPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           L A+ A  PL +    DLV+  F SA ER I  GD L+++ +   GI   Y  L++D
Sbjct: 209 LKAKQA-EPLPQDHVEDLVRDAFTSAVERHIEVGDGLQMMTITSEGIRESYTPLKRD 264


>gi|340517495|gb|EGR47739.1| proteosome beta subunit protease [Trichoderma reesei QM6a]
          Length = 264

 Score =  138 bits (347), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 75/174 (43%), Positives = 103/174 (59%), Gaps = 7/174 (4%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V++  GF AD +AL+  L     IY+++H K MS    A+ LS  LY KRFFPYY+  +L
Sbjct: 91  VLSVCGFAADGEALRDRLDTVCKIYRYRHGKPMSLNACAKRLSTILYQKRFFPYYTHAML 150

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA---- 132
           GGLD EGKG VY+YD VGSYER    + G+  +LIMPFLDNQ+   +  +  + +     
Sbjct: 151 GGLDEEGKGAVYSYDPVGSYEREQCRAGGAAGSLIMPFLDNQVNFKNQYIPGSGEGHELK 210

Query: 133 ---VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                PL+  E   LVK  F  A ER I  GD L+++++ K GI   ++ L+KD
Sbjct: 211 ERERRPLTRPEVETLVKDAFDGAVERHIEVGDSLQMLIITKDGIEEVFLPLKKD 264


>gi|50427419|ref|XP_462322.1| DEHA2G17996p [Debaryomyces hansenii CBS767]
 gi|49657992|emb|CAG90828.1| DEHA2G17996p [Debaryomyces hansenii CBS767]
          Length = 242

 Score =  138 bits (347), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 104/177 (58%), Gaps = 7/177 (3%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPGMAQLLSNTLYYKRFFPYY 71
            D   M ++GF AD  AL      +   Y+  H  K++S    A+ + + LY KRFFPYY
Sbjct: 67  GDDIAMTANGFAADGAALIDRFRNQLKWYKFDHGGKKLSIKSAARYIQHLLYGKRFFPYY 126

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
              ++ GLD+EGKG VY+YD VGSYER    + G+ ++LIMPFLDNQ+   +   +P  +
Sbjct: 127 VSTLIAGLDDEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-FVPGTN 185

Query: 132 AVTP-----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                    LS  E + LVK  F+SATER IY GD LEI ++ K GI +EY  L++D
Sbjct: 186 GTEKKELRYLSLDEVLQLVKDAFSSATERHIYVGDGLEIFIITKDGIRKEYYPLKRD 242


>gi|195328187|ref|XP_002030798.1| GM24382 [Drosophila sechellia]
 gi|195590871|ref|XP_002085168.1| GD12455 [Drosophila simulans]
 gi|194119741|gb|EDW41784.1| GM24382 [Drosophila sechellia]
 gi|194197177|gb|EDX10753.1| GD12455 [Drosophila simulans]
          Length = 235

 Score =  138 bits (347), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 70/169 (41%), Positives = 101/169 (59%), Gaps = 2/169 (1%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           + V+ S+G  AD  +L   +  R   Y+H H + M+   +AQ+LS  +Y +RFFPYY  N
Sbjct: 69  QTVLGSTGCWADTLSLTGSMKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSN 128

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 134
           +L G+DNEGKG VY+YD +G  E+  Y + G+  TL+ P LDNQ+   + + L   D + 
Sbjct: 129 ILAGIDNEGKGVVYSYDPIGHCEKATYRAGGTAGTLLQPVLDNQIGHKN-MNLEDADKI- 186

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            L++  AV +    F SA ERDIYTGD + I ++ K GI    + LRKD
Sbjct: 187 KLTKDRAVSVASDTFISAAERDIYTGDSVLINIITKDGIEVRTLSLRKD 235


>gi|225719280|gb|ACO15486.1| Proteasome subunit beta type-1 precursor [Caligus clemensi]
          Length = 239

 Score =  137 bits (346), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 69/171 (40%), Positives = 100/171 (58%), Gaps = 4/171 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           ++K V+ S G   DV    +++ ++   Y + H K +  P +AQL+SN+LY +RF PYY 
Sbjct: 73  SEKSVLGSCGCWCDVLTFVRVMESKMKNYSYTHGKDLGTPALAQLISNSLYQRRFLPYYI 132

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            NVL GLD  G+GC+YTYD VG  E+V  S  G+   LI P LDN +   +      +D 
Sbjct: 133 HNVLAGLDENGQGCIYTYDPVGCIEKVTMSCSGASMELIQPILDNIIDKKNMTNATKKD- 191

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              L+  E+V+L+  CF SATER I TGD +   ++ K GI  + + LR+D
Sbjct: 192 ---LTIDESVNLIHDCFVSATERQISTGDGIIFKIITKDGIETKSVGLRRD 239


>gi|159488463|ref|XP_001702229.1| hypothetical protein CHLREDRAFT_133001 [Chlamydomonas reinhardtii]
 gi|158271266|gb|EDO97089.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 245

 Score =  137 bits (346), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 71/158 (44%), Positives = 103/158 (65%), Gaps = 5/158 (3%)

Query: 27  VKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGC 86
           V+ L  ++  R L      +K+    G  +LLSNTLYYKRFFP+Y+FN+  GLD +G+G 
Sbjct: 92  VRRLAGVVCGRRLKKGWDQDKEAELWGAGRLLSNTLYYKRFFPFYTFNLCAGLDEQGRGA 151

Query: 87  VYTYDAVGSYERVGYSSQGSG-STLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLV 145
           VY YDA+GSYER GY  QG G S   + + D +L++ +    P+    TP S + A+DLV
Sbjct: 152 VYNYDAIGSYERSGYFCQGFGRSRRFLGYCDLRLEARANTPPPSH---TPTS-STALDLV 207

Query: 146 KTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           K  F SA ERDIYTGD++EI+++ + G+ R+ ++L+ D
Sbjct: 208 KDAFVSAGERDIYTGDQVEILIITREGVRRDSLQLKLD 245


>gi|358373509|dbj|GAA90107.1| proteasome component Prs3 [Aspergillus kawachii IFO 4308]
          Length = 260

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 76/181 (41%), Positives = 103/181 (56%), Gaps = 7/181 (3%)

Query: 10  SCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFP 69
           S      V++  GF AD +AL++ L A   +Y++QH K MS    AQ LS  LY KRFFP
Sbjct: 80  SGEGANIVLSVVGFAADGQALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFP 139

Query: 70  YYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA 129
           YY   +L GLD +GKG +Y+YD VGSYER    + GS ++LIMPFLDNQ+   +  +  +
Sbjct: 140 YYVHAILAGLDEDGKGALYSYDPVGSYEREQCRAAGSAASLIMPFLDNQVNFKNQYIPGS 199

Query: 130 QDA-------VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRK 182
            +          PL       LV+  F SA ER I  GD L+++V+ + GI   Y  L+K
Sbjct: 200 GEGHALEPKKAEPLPRDTVEQLVRDAFTSAVERHIEVGDGLQMMVITRSGIEEIYYPLKK 259

Query: 183 D 183
           D
Sbjct: 260 D 260


>gi|225719776|gb|ACO15734.1| Proteasome subunit beta type-1 precursor [Caligus clemensi]
          Length = 271

 Score =  137 bits (345), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 69/171 (40%), Positives = 100/171 (58%), Gaps = 4/171 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           ++K V+ S G   DV    +++ ++   Y + H K +  P +AQL+SN+LY +RF PYY 
Sbjct: 105 SEKSVLGSCGCWCDVLTFVRVMESKMKNYSYTHGKDLGTPALAQLISNSLYQRRFLPYYI 164

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            NVL GLD  G+GC+YTYD VG  E+V  S  G+   LI P LDN +   +      +D 
Sbjct: 165 HNVLAGLDENGQGCIYTYDPVGCIEKVTMSCSGASMELIQPILDNIIDKKNMTNATKKD- 223

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              L+  E+V+L+  CF SATER I TGD +   ++ K GI  + + LR+D
Sbjct: 224 ---LTIDESVNLIHDCFVSATERQISTGDGIIFKIITKDGIETKSVGLRRD 271


>gi|323334738|gb|EGA76111.1| Pre7p [Saccharomyces cerevisiae AWRI796]
          Length = 184

 Score =  137 bits (345), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/176 (42%), Positives = 103/176 (58%), Gaps = 5/176 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPGMAQLLSNTLYYKRFFPYY 71
            D  VM+++GF AD  AL K        Y   HN K++S    A+ + + LY KRFFPYY
Sbjct: 9   GDNIVMSANGFAADGDALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYY 68

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
              ++ GLD +GKG VY++D VGSYER    + G+ ++LIMPFLDNQ+   +        
Sbjct: 69  VHTIIAGLDEDGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPGTNG 128

Query: 132 AVTP----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            V      LS  E + LV+  F SATER I  GD LEI+++ K G+ +E+ EL++D
Sbjct: 129 KVKKPLKYLSVEEVIKLVRDSFTSATERHIQVGDGLEILIVTKDGVRKEFYELKRD 184


>gi|6319430|ref|NP_009512.1| proteasome core particle subunit beta 6 [Saccharomyces cerevisiae
           S288c]
 gi|130882|sp|P23724.1|PSB6_YEAST RecName: Full=Proteasome subunit beta type-6; AltName:
           Full=Multicatalytic endopeptidase complex subunit C5;
           AltName: Full=Proteasome component C5; Flags: Precursor
 gi|11514003|pdb|1G0U|L Chain L, A Gated Channel Into The Proteasome Core Particle
 gi|11514017|pdb|1G0U|Z Chain Z, A Gated Channel Into The Proteasome Core Particle
 gi|178847471|pdb|2ZCY|L Chain L, Yeast 20s Proteasome:syringolin A-Complex
 gi|178847485|pdb|2ZCY|Z Chain Z, Yeast 20s Proteasome:syringolin A-Complex
 gi|178847513|pdb|3BDM|L Chain L, Yeast 20s Proteasome:glidobactin A-Complex
 gi|178847527|pdb|3BDM|Z Chain Z, Yeast 20s Proteasome:glidobactin A-Complex
 gi|323462947|pdb|3NZJ|L Chain L, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Ligand 2a
 gi|323462961|pdb|3NZJ|Z Chain Z, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Ligand 2a
 gi|323462975|pdb|3NZW|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With 2b
 gi|323462989|pdb|3NZW|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With 2b
 gi|323463003|pdb|3NZX|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Ligand 2c
 gi|323463017|pdb|3NZX|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Ligand 2c
 gi|333361183|pdb|3MG6|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           6
 gi|333361197|pdb|3MG6|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           6
 gi|333361211|pdb|3MG7|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           8
 gi|333361225|pdb|3MG7|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           8
 gi|333361239|pdb|3MG8|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           16
 gi|333361253|pdb|3MG8|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           16
 gi|403071959|pdb|4B4T|6 Chain 6, Near-Atomic Resolution Structural Model Of The Yeast 26s
           Proteasome
 gi|171468|gb|AAA68908.1| proteasome subunit [Saccharomyces cerevisiae]
 gi|218467|dbj|BAA00725.1| proteasome subunit [Saccharomyces cerevisiae]
 gi|463267|emb|CAA55053.1| YBL0407 [Saccharomyces cerevisiae]
 gi|536057|emb|CAA84861.1| PRE7 [Saccharomyces cerevisiae]
 gi|45270814|gb|AAS56788.1| YBL041W [Saccharomyces cerevisiae]
 gi|151946352|gb|EDN64574.1| proteasome subunit [Saccharomyces cerevisiae YJM789]
 gi|207347858|gb|EDZ73901.1| YBL041Wp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256272740|gb|EEU07713.1| Pre7p [Saccharomyces cerevisiae JAY291]
 gi|259144804|emb|CAY77743.1| Pre7p [Saccharomyces cerevisiae EC1118]
 gi|285810292|tpg|DAA07077.1| TPA: proteasome core particle subunit beta 6 [Saccharomyces
           cerevisiae S288c]
 gi|323306044|gb|EGA59778.1| Pre7p [Saccharomyces cerevisiae FostersB]
 gi|323338788|gb|EGA80003.1| Pre7p [Saccharomyces cerevisiae Vin13]
 gi|323349870|gb|EGA84083.1| Pre7p [Saccharomyces cerevisiae Lalvin QA23]
 gi|323356250|gb|EGA88054.1| Pre7p [Saccharomyces cerevisiae VL3]
 gi|349576338|dbj|GAA21509.1| K7_Pre7p [Saccharomyces cerevisiae Kyokai no. 7]
 gi|365767035|gb|EHN08523.1| Pre7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
 gi|392301173|gb|EIW12262.1| Pre7p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 241

 Score =  137 bits (345), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/176 (42%), Positives = 103/176 (58%), Gaps = 5/176 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPGMAQLLSNTLYYKRFFPYY 71
            D  VM+++GF AD  AL K        Y   HN K++S    A+ + + LY KRFFPYY
Sbjct: 66  GDNIVMSANGFAADGDALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYY 125

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
              ++ GLD +GKG VY++D VGSYER    + G+ ++LIMPFLDNQ+   +        
Sbjct: 126 VHTIIAGLDEDGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPGTNG 185

Query: 132 AVTP----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            V      LS  E + LV+  F SATER I  GD LEI+++ K G+ +E+ EL++D
Sbjct: 186 KVKKPLKYLSVEEVIKLVRDSFTSATERHIQVGDGLEILIVTKDGVRKEFYELKRD 241


>gi|258564630|ref|XP_002583060.1| proteasome component C5 [Uncinocarpus reesii 1704]
 gi|237908567|gb|EEP82968.1| proteasome component C5 [Uncinocarpus reesii 1704]
          Length = 259

 Score =  137 bits (345), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 103/175 (58%), Gaps = 7/175 (4%)

Query: 16  CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNV 75
            +++  GF AD +AL++ L A   +Y++ H K MS    AQ LS  LY KRFFPYY   +
Sbjct: 85  IILSVVGFSADGQALKERLDAIVKMYEYHHGKPMSVKACAQRLSTILYSKRFFPYYVHAI 144

Query: 76  LGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA--- 132
           LGGLD +GKG +Y+YD VGSYER    + G+ ++LIMPFLDNQ+   +  +  A+     
Sbjct: 145 LGGLDEDGKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNLKNQYVKSAERGDEL 204

Query: 133 ----VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                 PLS   A++LV+  F SA ER I  GD L+ +++   GI      L+KD
Sbjct: 205 VPRVPEPLSRDTALELVRDAFTSAVERHIEVGDGLQTMIITSDGIQEIITPLKKD 259


>gi|195495065|ref|XP_002095108.1| GE22205 [Drosophila yakuba]
 gi|194181209|gb|EDW94820.1| GE22205 [Drosophila yakuba]
          Length = 235

 Score =  137 bits (345), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 69/169 (40%), Positives = 99/169 (58%), Gaps = 2/169 (1%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           + V+ S+G  AD  +L   +  R   Y+H H + M+   +AQ+LS  +Y +RFFPYY  N
Sbjct: 69  QTVLGSTGCWADTLSLTGSMKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSN 128

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 134
           +L G+DNEGKG VY+YD +G  E+  Y + G+  TL+ P LDNQ+   +  L  A     
Sbjct: 129 ILAGIDNEGKGVVYSYDPIGHCEKATYRAGGTAGTLLQPVLDNQIGHKNMNLADADK--I 186

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            L++  AV +    F SA ERDIYTGD + I ++ K GI    + LR+D
Sbjct: 187 KLTKERAVSVASDTFISAAERDIYTGDSVLINIITKDGIEVRTLTLRQD 235


>gi|3114281|pdb|1RYP|M Chain M, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
           Angstroms Resolution
 gi|3114295|pdb|1RYP|1 Chain 1, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
           Angstroms Resolution
 gi|11513424|pdb|1G65|L Chain L, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
           Molecular Basis For Selectivity Of
           Alpha,Beta-Epoxyketone Proteasome Inhibitors
 gi|11513438|pdb|1G65|Z Chain Z, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
           Molecular Basis For Selectivity Of
           Alpha,Beta-Epoxyketone Proteasome Inhibitors
 gi|14488817|pdb|1FNT|M Chain M, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|14488831|pdb|1FNT|AA Chain a, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|20150388|pdb|1JD2|L Chain L, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
           Complex: A Non- Covalent Proteasome Inhibitor
 gi|20150395|pdb|1JD2|S Chain S, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
           Complex: A Non- Covalent Proteasome Inhibitor
 gi|75765711|pdb|1Z7Q|M Chain M, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|75765725|pdb|1Z7Q|AA Chain a, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|93279379|pdb|2F16|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Bortezomib
 gi|93279393|pdb|2F16|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Bortezomib
 gi|99032213|pdb|2FAK|L Chain L, Crystal Structure Of Salinosporamide A In Complex With The
           Yeast 20s Proteasome
 gi|99032227|pdb|2FAK|Z Chain Z, Crystal Structure Of Salinosporamide A In Complex With The
           Yeast 20s Proteasome
 gi|112490854|pdb|2GPL|L Chain L, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
           Proteasome Inhibitors
 gi|112490868|pdb|2GPL|Z Chain Z, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
           Proteasome Inhibitors
 gi|190016378|pdb|3D29|L Chain L, Proteasome Inhibition By Fellutamide B
 gi|190016392|pdb|3D29|Z Chain Z, Proteasome Inhibition By Fellutamide B
 gi|197725332|pdb|3E47|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Homobelactosin C
 gi|197725346|pdb|3E47|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Homobelactosin C
 gi|211939223|pdb|3DY3|L Chain L, Crystal Structure Of Yeast 20s Proteasome In Complex With
           The Epimer Form Of Spirolactacystin
 gi|211939237|pdb|3DY3|Z Chain Z, Crystal Structure Of Yeast 20s Proteasome In Complex With
           The Epimer Form Of Spirolactacystin
 gi|211939251|pdb|3DY4|L Chain L, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Spirolactacystin
 gi|211939265|pdb|3DY4|Z Chain Z, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Spirolactacystin
 gi|238828248|pdb|3GPJ|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Syringolin B
 gi|238828262|pdb|3GPJ|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Syringolin B
 gi|258588332|pdb|3GPT|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Slow Substrate Ligand
 gi|258588346|pdb|3GPT|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Slow Substrate Ligand
 gi|258588360|pdb|3GPW|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Irreversible Inhibitor
           Ligand
 gi|258588374|pdb|3GPW|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Irreversible Inhibitor
           Ligand
 gi|258588554|pdb|3HYE|L Chain L, Crystal Structure Of 20s Proteasome In Complex With
           Hydroxylated Salinosporamide
 gi|258588568|pdb|3HYE|Z Chain Z, Crystal Structure Of 20s Proteasome In Complex With
           Hydroxylated Salinosporamide
 gi|298508234|pdb|1VSY|M Chain M, Proteasome Activator Complex
 gi|298508248|pdb|1VSY|1 Chain 1, Proteasome Activator Complex
 gi|298508450|pdb|3L5Q|Q Chain Q, Proteasome Activator Complex
 gi|298508464|pdb|3L5Q|3 Chain 3, Proteasome Activator Complex
 gi|330689392|pdb|3MG4|L Chain L, Structure Of Yeast 20s Proteasome With Compound 1
 gi|330689406|pdb|3MG4|Z Chain Z, Structure Of Yeast 20s Proteasome With Compound 1
 gi|333361155|pdb|3MG0|L Chain L, Structure Of Yeast 20s Proteasome With Bortezomib
 gi|333361169|pdb|3MG0|Z Chain Z, Structure Of Yeast 20s Proteasome With Bortezomib
 gi|335892352|pdb|3OKJ|L Chain L, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
           Structure Motif For Proteasome Inhibition
 gi|335892366|pdb|3OKJ|Z Chain Z, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
           Structure Motif For Proteasome Inhibition
 gi|340780430|pdb|3OEU|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           24
 gi|340780444|pdb|3OEU|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           24
 gi|340780458|pdb|3OEV|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           25
 gi|340780472|pdb|3OEV|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           25
 gi|350610683|pdb|3TDD|L Chain L, Crystal Structure Of Yeast Cp In Complex With Belactosin C
 gi|350610697|pdb|3TDD|Z Chain Z, Crystal Structure Of Yeast Cp In Complex With Belactosin C
 gi|359545857|pdb|3SHJ|L Chain L, Proteasome In Complex With Hydroxyurea Derivative Hu10
 gi|359545871|pdb|3SHJ|Z Chain Z, Proteasome In Complex With Hydroxyurea Derivative Hu10
 gi|378792252|pdb|3UN4|L Chain L, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
 gi|378792266|pdb|3UN4|Z Chain Z, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
 gi|378792286|pdb|3UN8|L Chain L, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
 gi|378792300|pdb|3UN8|Z Chain Z, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
 gi|390980827|pdb|3SDI|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           20
 gi|390980841|pdb|3SDI|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           20
 gi|390980855|pdb|3SDK|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           34
 gi|390980869|pdb|3SDK|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           34
 gi|402550743|pdb|4GK7|L Chain L, Yeast 20s Proteasome In Complex With The
           Syringolin-Glidobactin Chimera
 gi|402550757|pdb|4GK7|Z Chain Z, Yeast 20s Proteasome In Complex With The
           Syringolin-Glidobactin Chimera
 gi|403072203|pdb|4G4S|M Chain M, Structure Of Proteasome-Pba1-Pba2 Complex
 gi|409973871|pdb|4FZC|L Chain L, 20s Yeast Proteasome In Complex With Cepafungin I
 gi|409973885|pdb|4FZC|Z Chain Z, 20s Yeast Proteasome In Complex With Cepafungin I
 gi|409973899|pdb|4FZG|L Chain L, 20s Yeast Proteasome In Complex With Glidobactin
 gi|409973913|pdb|4FZG|Z Chain Z, 20s Yeast Proteasome In Complex With Glidobactin
 gi|444302350|pdb|4INR|L Chain L, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
           Lu102
 gi|444302364|pdb|4INR|Z Chain Z, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
           Lu102
 gi|444302378|pdb|4INT|L Chain L, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
           Lu122
 gi|444302392|pdb|4INT|Z Chain Z, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
           Lu122
 gi|444302406|pdb|4INU|L Chain L, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
           Lu112
 gi|444302420|pdb|4INU|Z Chain Z, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
           Lu112
          Length = 222

 Score =  137 bits (345), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/176 (42%), Positives = 103/176 (58%), Gaps = 5/176 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPGMAQLLSNTLYYKRFFPYY 71
            D  VM+++GF AD  AL K        Y   HN K++S    A+ + + LY KRFFPYY
Sbjct: 47  GDNIVMSANGFAADGDALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYY 106

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
              ++ GLD +GKG VY++D VGSYER    + G+ ++LIMPFLDNQ+   +        
Sbjct: 107 VHTIIAGLDEDGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPGTNG 166

Query: 132 AVTP----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            V      LS  E + LV+  F SATER I  GD LEI+++ K G+ +E+ EL++D
Sbjct: 167 KVKKPLKYLSVEEVIKLVRDSFTSATERHIQVGDGLEILIVTKDGVRKEFYELKRD 222


>gi|440636579|gb|ELR06498.1| 20S proteasome subunit beta 6 [Geomyces destructans 20631-21]
          Length = 266

 Score =  137 bits (345), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/183 (43%), Positives = 105/183 (57%), Gaps = 9/183 (4%)

Query: 9   TSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFF 68
           ++ R    +++  GF AD  AL++ L     +Y++QH K M+    AQ LS  LY KRFF
Sbjct: 85  STQRDATLILSVVGFAADANALKERLDTVVKLYRYQHGKAMTVKAAAQRLSIILYQKRFF 144

Query: 69  PYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLP 128
           PYY+  +LGGLD EGKG VY+YD VGSYER    + G+ ++LIMPFLD+Q+   +    P
Sbjct: 145 PYYAHAILGGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDSQVNFKNQ-YEP 203

Query: 129 AQDAVTPLSEAEAV--------DLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMEL 180
                  L E E V        DLVK  F SA ER I  GD L ++V+ K GI   Y  L
Sbjct: 204 GSGVGHNLKERERVLLGRDVVEDLVKDAFDSAVERHIEVGDGLLMMVITKDGIEEIYKPL 263

Query: 181 RKD 183
           ++D
Sbjct: 264 KQD 266


>gi|302412397|ref|XP_003004031.1| proteasome component C5 [Verticillium albo-atrum VaMs.102]
 gi|261356607|gb|EEY19035.1| proteasome component C5 [Verticillium albo-atrum VaMs.102]
          Length = 264

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 78/183 (42%), Positives = 107/183 (58%), Gaps = 8/183 (4%)

Query: 9   TSCRADKCVMASS-GFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRF 67
           TS + D  ++ S  GF AD +AL++ L A   IY+H+H K MS    A+ LS  LY KRF
Sbjct: 82  TSNQDDATILLSVVGFAADGEALKERLDAICKIYRHRHGKAMSVTACAKRLSTILYQKRF 141

Query: 68  FPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLL 127
           FPYY + +LGGLD +G G V++YD VGSYER    + G+ ++LI PFLDNQ+   +  + 
Sbjct: 142 FPYYVYAILGGLDEKGVGAVFSYDPVGSYEREQSRAGGAAASLITPFLDNQVNFKNQYVP 201

Query: 128 PA-------QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMEL 180
            +       +  V PL   EA  LVK  F  A ER I  GD L+++V+   GI    + L
Sbjct: 202 GSGVGHELKEREVVPLERKEAEILVKDAFDGAVERHIEVGDALQMMVITSKGIEEILLPL 261

Query: 181 RKD 183
           +KD
Sbjct: 262 KKD 264


>gi|401626713|gb|EJS44638.1| pre7p [Saccharomyces arboricola H-6]
          Length = 241

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/177 (42%), Positives = 103/177 (58%), Gaps = 7/177 (3%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPGMAQLLSNTLYYKRFFPYY 71
            D  VM+++GF AD  AL K        Y   HN K++S    A+ + + LY KRFFPYY
Sbjct: 66  GDNIVMSANGFAADGDALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYY 125

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
              ++ GLD  GKG VY++D VGSYER    + G+ ++LIMPFLDNQ+   +    P  D
Sbjct: 126 VHTIIAGLDENGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-YEPGTD 184

Query: 132 AVTP-----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                    LS  E + LV+  F SATER I  GD LEI+++ K G+ +E+ EL++D
Sbjct: 185 GKVKKPLKYLSVEEVIKLVRDSFTSATERHIQVGDGLEILIVTKEGVRKEFYELKRD 241


>gi|367043468|ref|XP_003652114.1| hypothetical protein THITE_2113189 [Thielavia terrestris NRRL 8126]
 gi|346999376|gb|AEO65778.1| hypothetical protein THITE_2113189 [Thielavia terrestris NRRL 8126]
          Length = 265

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 76/174 (43%), Positives = 104/174 (59%), Gaps = 7/174 (4%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V++  GF AD +AL++ L A   +Y+++H K MS    AQ LS  LY KRFFPYY   +L
Sbjct: 92  VLSVVGFAADGEALKERLDAICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYYVHAIL 151

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA---- 132
           GGLD +GKG VY+YD VGSYER    + G+ ++LIMPFLDNQ+   +  +  + +     
Sbjct: 152 GGLDEDGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYVPNSGEGHALQ 211

Query: 133 ---VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                PL+ AE   LVK  F  A ER I  GD L+++ + K GI    + L+KD
Sbjct: 212 ERERRPLTRAEVEMLVKDAFDGAVERHIEVGDGLQMMAITKDGIEEIVLPLKKD 265


>gi|401838704|gb|EJT42186.1| PRE7-like protein [Saccharomyces kudriavzevii IFO 1802]
          Length = 241

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/177 (42%), Positives = 103/177 (58%), Gaps = 7/177 (3%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPGMAQLLSNTLYYKRFFPYY 71
            D  VM+++GF AD  AL K        Y   HN K++S    A+ + + LY KRFFPYY
Sbjct: 66  GDNLVMSANGFAADGDALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYY 125

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
              ++ GLD  GKG VY++D VGSYER    + G+ ++LIMPFLDNQ+   +    P  D
Sbjct: 126 VHTIIAGLDENGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-YEPGTD 184

Query: 132 AVTP-----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                    LS  E + LV+  F SATER I  GD LEI+++ K G+ +E+ EL++D
Sbjct: 185 GKVKKPLKYLSVEEVIKLVRDSFTSATERHIQVGDGLEILIVTKDGVKKEFYELKRD 241


>gi|145255859|ref|XP_001399123.1| proteasome component C5 [Aspergillus niger CBS 513.88]
 gi|134084720|emb|CAK43377.1| unnamed protein product [Aspergillus niger]
 gi|350630872|gb|EHA19244.1| hypothetical protein ASPNIDRAFT_54260 [Aspergillus niger ATCC 1015]
          Length = 260

 Score =  137 bits (344), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 75/181 (41%), Positives = 103/181 (56%), Gaps = 7/181 (3%)

Query: 10  SCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFP 69
           S      V++  GF AD +AL++ L A   +Y++QH K MS    AQ LS  LY KRFFP
Sbjct: 80  SGEGANIVLSVVGFAADGQALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFP 139

Query: 70  YYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA 129
           YY   +L GLD +GKG +Y+YD VGSYER    + GS ++LIMPFLDNQ+   +  +  +
Sbjct: 140 YYVHAILAGLDEDGKGALYSYDPVGSYEREQCRAAGSAASLIMPFLDNQVNFKNQYIPGS 199

Query: 130 QDA-------VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRK 182
            +          PL       LV+  F SA ER I  GD L+++V+ + G+   Y  L+K
Sbjct: 200 GEGHALEPKKAEPLPRDTVEQLVRDAFTSAVERHIEVGDGLQMMVITRSGVEEIYYPLKK 259

Query: 183 D 183
           D
Sbjct: 260 D 260


>gi|115400894|ref|XP_001216035.1| proteasome component C5 [Aspergillus terreus NIH2624]
 gi|114189976|gb|EAU31676.1| proteasome component C5 [Aspergillus terreus NIH2624]
          Length = 261

 Score =  137 bits (344), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 75/176 (42%), Positives = 103/176 (58%), Gaps = 7/176 (3%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           + +++  GF AD  AL++ L A   +Y++QH K MS    AQ LS  LY KRFFPYY   
Sbjct: 86  QILLSVVGFAADGHALKERLDAVVKMYKYQHGKPMSVTACAQRLSTILYQKRFFPYYVHA 145

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA-- 132
           +L GLD +GKG +Y+YD VGSYER    + GS ++LIMPFLDNQ+   +  +  + +   
Sbjct: 146 ILAGLDEDGKGALYSYDPVGSYEREQCRAAGSAASLIMPFLDNQVNFKNQYIPGSGEGHA 205

Query: 133 -----VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                  PL  A    LV+  F SA ER I  GD L+++V+ + GI   Y  L+KD
Sbjct: 206 LEPKKPEPLPRATVERLVRDAFTSAVERHIEVGDGLQMMVITRDGIEEIYTPLKKD 261


>gi|405121415|gb|AFR96184.1| proteasome subunit [Cryptococcus neoformans var. grubii H99]
          Length = 272

 Score =  137 bits (344), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 73/163 (44%), Positives = 97/163 (59%), Gaps = 7/163 (4%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+A++GF AD     K +  R   Y+H HNK M    +A+++   LY KRFFPYY +
Sbjct: 70  DKVVLATNGFAADGNNFVKRVKQRLEWYEHAHNKSMGLKSIARMIQTMLYGKRFFPYYVY 129

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL----KSPSPLLLPA 129
           N+LGG++ +G G VY++D VGSYER    + G+  +LI PFLDNQ+    + P P   P 
Sbjct: 130 NILGGIEEDGSGAVYSFDPVGSYEREACRAAGAAQSLIQPFLDNQVYFRNQQPEPGAAPF 189

Query: 130 QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEI-VVLNKG 171
                PLS    + LV   F SATER I  GD +EI VV+ KG
Sbjct: 190 VPGNLPLS--TVLSLVVDSFTSATERHIEVGDGMEIYVVMAKG 230


>gi|255714573|ref|XP_002553568.1| KLTH0E01826p [Lachancea thermotolerans]
 gi|238934950|emb|CAR23131.1| KLTH0E01826p [Lachancea thermotolerans CBS 6340]
          Length = 242

 Score =  137 bits (344), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 72/176 (40%), Positives = 106/176 (60%), Gaps = 5/176 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPGMAQLLSNTLYYKRFFPYY 71
            D  +++++GF AD  AL K        Y   HN K++S    A+ + + LY KRFFPYY
Sbjct: 67  GDNILISANGFAADGNALVKRFQNSLKWYHFDHNDKKLSMRSAARNIQHLLYGKRFFPYY 126

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
              ++ GLD EGKG VY++D VGSYER    + G+ ++LIMPFLDNQ+   +     +  
Sbjct: 127 VHTIIAGLDEEGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPDSHG 186

Query: 132 A----VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                V  L+  E V LV+  F+SATER I+ GD +EI+++ K G+ +E+ EL++D
Sbjct: 187 TKRKHVKFLTVEEVVQLVRDAFSSATERHIHVGDGVEILIVTKEGVRKEFFELKRD 242


>gi|388851426|emb|CCF54828.1| probable PRE7-20S proteasome subunit(beta6) [Ustilago hordei]
          Length = 291

 Score =  137 bits (344), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 68/157 (43%), Positives = 95/157 (60%), Gaps = 2/157 (1%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +A++GF AD +AL   +  R  +Y+H H + M    +A+++S  LY KRFFPYY +
Sbjct: 76  DKATLATNGFAADAEALVSRVRQRLEMYRHAHGRSMPLHSIARMISTILYGKRFFPYYVY 135

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N+LGGLD EGKG VY++D VGSYER    + G+  +LI PF DNQ+   +    P     
Sbjct: 136 NILGGLDEEGKGAVYSFDPVGSYEREFCRAAGAAQSLIQPFFDNQIMFKNQTSTPEHKVP 195

Query: 134 TP--LSEAEAVDLVKTCFASATERDIYTGDKLEIVVL 168
            P  ++  E + +V   F SATER I  GD LE+ V+
Sbjct: 196 EPGQMTLPEVLKIVVDSFTSATERHIEVGDGLEVFVV 232


>gi|58268196|ref|XP_571254.1| hypothetical protein CNF01080 [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|134113318|ref|XP_774684.1| hypothetical protein CNBF3630 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50257328|gb|EAL20037.1| hypothetical protein CNBF3630 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57227489|gb|AAW43947.1| hypothetical protein CNF01080 [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 272

 Score =  136 bits (343), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 73/163 (44%), Positives = 97/163 (59%), Gaps = 7/163 (4%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+A++GF AD     K +  R   Y+H HNK M    +A+++   LY KRFFPYY +
Sbjct: 70  DKVVLATNGFAADGNNFVKRVKQRLEWYEHAHNKAMGLKSIARMIQTMLYGKRFFPYYVY 129

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL----KSPSPLLLPA 129
           N+LGG++ +G G VY++D VGSYER    + G+  +LI PFLDNQ+    + P P   P 
Sbjct: 130 NILGGIEEDGSGAVYSFDPVGSYEREACRAAGAAQSLIQPFLDNQVYFKNQQPEPGAAPF 189

Query: 130 QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEI-VVLNKG 171
                PLS    + LV   F SATER I  GD +EI VV+ KG
Sbjct: 190 VPGNLPLS--TVLSLVVDSFTSATERHIEVGDGMEIYVVMAKG 230


>gi|443895548|dbj|GAC72894.1| 20S proteasome, regulatory subunit beta type PSMB1/PRE7 [Pseudozyma
           antarctica T-34]
          Length = 292

 Score =  136 bits (343), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 68/157 (43%), Positives = 97/157 (61%), Gaps = 2/157 (1%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +A++GF AD +AL   +  R  +Y+H H + M    +A+++S  LY KRFFPYY +
Sbjct: 75  DKATLATNGFAADAEALVSRIRQRLEMYRHAHGRSMPLHSIARMISTMLYGKRFFPYYVY 134

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N+LGGLD +GKG VY++D VGSYER    + G+  +LI PF DNQ+   +    P +   
Sbjct: 135 NILGGLDEQGKGAVYSFDPVGSYEREFCRAAGAAQSLIQPFFDNQIMFRNQSDTPERKVP 194

Query: 134 TP--LSEAEAVDLVKTCFASATERDIYTGDKLEIVVL 168
           TP  ++  E + +V   F SATER I  GD LE+ V+
Sbjct: 195 TPGQMTLPEVLKIVIDSFTSATERHIEVGDGLEVFVV 231


>gi|321473024|gb|EFX83992.1| hypothetical protein DAPPUDRAFT_230628 [Daphnia pulex]
          Length = 230

 Score =  136 bits (343), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 72/173 (41%), Positives = 104/173 (60%), Gaps = 8/173 (4%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           +++ V+  SG   DV    + L AR  +Y H+H K MS P +AQL+S  LY+KRFFPYY 
Sbjct: 64  SEQTVLGVSGCWCDVLTFTRTLEARMKMYLHEHLKPMSTPAVAQLVSTMLYHKRFFPYYV 123

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ--LKSPSPLLLPAQ 130
            N++ GLD +GKG +Y+YD VG  E+  Y + G+   ++ P LDNQ  LK+    LLP  
Sbjct: 124 SNIVAGLDQDGKGTLYSYDPVGHCEKNRYRAGGAAGAMLQPLLDNQVGLKNMKGELLPN- 182

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                +++ +A+ ++K  F SA ERD  TGD + I ++ K GI   +  LRKD
Sbjct: 183 -----ITKEKALMVIKDSFISAAERDTSTGDGVIINIITKAGIEVMHFPLRKD 230


>gi|380480528|emb|CCF42385.1| proteasome A-type and B-type [Colletotrichum higginsianum]
          Length = 263

 Score =  136 bits (343), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 77/183 (42%), Positives = 105/183 (57%), Gaps = 8/183 (4%)

Query: 9   TSCRADKCVMASS-GFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRF 67
           TS + D  +M S  GF AD +AL+  L     IY+++H K MS    A+ LS  LY KRF
Sbjct: 81  TSTQEDATIMLSVVGFAADGEALRDRLDTICKIYRYRHGKPMSVTACAKRLSTILYQKRF 140

Query: 68  FPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLL 127
           FPYY + +LGGLD EG G V++YD VGSYER    + G+ ++LI PFLDNQ+   +  + 
Sbjct: 141 FPYYVYAILGGLDEEGVGAVFSYDPVGSYEREQSRAGGAAASLITPFLDNQVNFKNQYIP 200

Query: 128 PA-------QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMEL 180
            +       +    PL   EA  LVK  F  A ER I  GD L+++++ K GI    + L
Sbjct: 201 GSGVGHELQERPRVPLERKEAEILVKDAFDGAVERHIEVGDHLQMMIITKNGIEEVLLPL 260

Query: 181 RKD 183
           +KD
Sbjct: 261 KKD 263


>gi|321260412|ref|XP_003194926.1| 20S proteasome beta-type subunit; Pre7p [Cryptococcus gattii WM276]
 gi|317461398|gb|ADV23139.1| 20S proteasome beta-type subunit, putative; Pre7p [Cryptococcus
           gattii WM276]
          Length = 272

 Score =  136 bits (343), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 71/159 (44%), Positives = 95/159 (59%), Gaps = 6/159 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+A++GF AD     K +  R   Y+H HNK MS   +A+++   LY KRFFPYY +
Sbjct: 70  DKVVLATNGFAADGNNFVKRVKQRLEWYEHAHNKPMSLKSIARMIQTMLYGKRFFPYYVY 129

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL----KSPSPLLLPA 129
           N+LGG++ +G G VY++D VGSYER    + G+  +LI PFLDNQ+    + P P   P 
Sbjct: 130 NILGGIEEDGSGAVYSFDPVGSYEREACRAAGAAQSLIQPFLDNQVYFKNQQPEPGAAPF 189

Query: 130 QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVL 168
                PLS    + LV   F SATER I  GD +EI V+
Sbjct: 190 VPGNLPLS--TVLSLVVDSFTSATERHIEVGDGMEIYVV 226


>gi|17737605|ref|NP_524115.1| proteasome 26kD subunit [Drosophila melanogaster]
 gi|12643277|sp|P40304.2|PSB1_DROME RecName: Full=Proteasome subunit beta type-1; AltName:
           Full=Proteasome 26 kDa subunit; Flags: Precursor
 gi|7294080|gb|AAF49435.1| proteasome 26kD subunit [Drosophila melanogaster]
 gi|15291705|gb|AAK93121.1| LD24159p [Drosophila melanogaster]
 gi|220947536|gb|ACL86311.1| Pros26-PA [synthetic construct]
          Length = 235

 Score =  136 bits (343), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 69/169 (40%), Positives = 101/169 (59%), Gaps = 2/169 (1%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           + V+ S+G  AD  +L   +  R   Y+H H + M+   +AQ+LS  +Y +RFFPYY  N
Sbjct: 69  QTVLGSAGCWADTLSLTGSIKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSN 128

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 134
           +L G+DNEGKG VY+YD +G  E+  Y + G+  TL+ P LDNQ+   + + L   D + 
Sbjct: 129 ILAGIDNEGKGVVYSYDPIGHCEKATYRAGGTAGTLLQPVLDNQIGHKN-MNLEDADKI- 186

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            L++  AV +    F SA ERDIYTGD + I ++ K GI    + LR+D
Sbjct: 187 KLTKERAVSVASDTFISAAERDIYTGDSVLINIITKDGIEVRTLTLRQD 235


>gi|156847580|ref|XP_001646674.1| hypothetical protein Kpol_1028p92 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117353|gb|EDO18816.1| hypothetical protein Kpol_1028p92 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 242

 Score =  136 bits (342), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 105/177 (59%), Gaps = 7/177 (3%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPGMAQLLSNTLYYKRFFPYY 71
            D  V++++GF AD +AL K        Y   +N K +S    A+ + + LY KRFFPYY
Sbjct: 67  GDNIVISANGFAADGEALVKRFKNSIKWYHFDNNDKTLSLSSAARNIQHLLYGKRFFPYY 126

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
              ++ GLD EGKG VY++D VGSYER    + G+ ++LIMPFLDNQ+   +    P  D
Sbjct: 127 VHTIIAGLDEEGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-YEPDSD 185

Query: 132 AVTP-----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                    LS  E + LV+  F SATER I+ GD LEI+++ K G+ +E+ EL++D
Sbjct: 186 GTVKRPLKFLSIDEVIRLVRDAFTSATERHIHVGDGLEILIVTKDGVRKEFYELKRD 242


>gi|254574222|ref|XP_002494220.1| Beta 6 subunit of the 20S proteasome [Komagataella pastoris GS115]
 gi|238034019|emb|CAY72041.1| Beta 6 subunit of the 20S proteasome [Komagataella pastoris GS115]
 gi|328353959|emb|CCA40356.1| 20S proteasome subunit beta 6 [Komagataella pastoris CBS 7435]
          Length = 243

 Score =  136 bits (342), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 71/175 (40%), Positives = 102/175 (58%), Gaps = 4/175 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            D+ ++ ++GF AD  AL K    +   Y   H K ++    A+ + + LY KRFFPYY 
Sbjct: 69  GDELLITANGFAADGDALVKRFRNQLKWYHFDHKKNLTIKSAARFIQHLLYGKRFFPYYV 128

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLL----P 128
             ++ GLD EGKG VY++D VGSYER    + G  ++LIMPFLDNQ+   + +       
Sbjct: 129 HTIIAGLDEEGKGAVYSFDPVGSYEREQCRAGGGAASLIMPFLDNQVNFKNQMDPDSNGT 188

Query: 129 AQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           A+  +  L   E + LV+  F+SATER I  GD LEI+++ K G+  EY  L+KD
Sbjct: 189 AKKELKYLKLDEVISLVRDAFSSATERHINVGDGLEILIVTKDGVRTEYYPLKKD 243


>gi|444321340|ref|XP_004181326.1| hypothetical protein TBLA_0F02680 [Tetrapisispora blattae CBS 6284]
 gi|387514370|emb|CCH61807.1| hypothetical protein TBLA_0F02680 [Tetrapisispora blattae CBS 6284]
          Length = 241

 Score =  136 bits (342), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 71/176 (40%), Positives = 106/176 (60%), Gaps = 5/176 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPGMAQLLSNTLYYKRFFPYY 71
            D  V++++GF AD +AL +        Y   HN K+++    A+ + + LY KRFFPYY
Sbjct: 66  GDNIVISANGFAADGEALVQRFKNSIKWYHFDHNDKKLTMKSAARNIQHLLYGKRFFPYY 125

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
              ++ GLD EGKG VY++D VGSYER    + G+ ++LIMPFLDNQ+   +  +  +  
Sbjct: 126 VHTIIAGLDEEGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYVPESNG 185

Query: 132 AVTP----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            V      L+  E + LV+  F SATER I  GD LEI+++ K G+ +EY +L++D
Sbjct: 186 KVKRPLKYLTIDECIKLVRDAFTSATERHIQVGDGLEILIVTKDGVRKEYFDLKRD 241


>gi|407921854|gb|EKG14992.1| Proteasome subunit alpha/beta [Macrophomina phaseolina MS6]
          Length = 266

 Score =  135 bits (341), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 103/175 (58%), Gaps = 7/175 (4%)

Query: 16  CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNV 75
            V++  GF AD  AL++ L     +Y++QH K MS    AQ LS+ LY KRFFPYY   +
Sbjct: 92  IVLSVVGFAADGAALKERLDTIVKMYKYQHGKPMSVSACAQRLSHILYGKRFFPYYVHAI 151

Query: 76  LGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA------ 129
           LGGLD EG+G +Y+YD VGSYER    + G+ ++LIMPFLDNQ+   +  +  +      
Sbjct: 152 LGGLDEEGRGALYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYIPGSGVGHAL 211

Query: 130 -QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            +    PL       LV   F+SA ER I  GD L+++++ + GI   Y EL+KD
Sbjct: 212 EERPRDPLPRDHVEALVHDAFSSAVERHIEVGDGLQMMIITRDGIQEVYKELKKD 266


>gi|392868|gb|AAC46465.1| proteasome subunit [Drosophila melanogaster]
          Length = 235

 Score =  135 bits (341), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 69/169 (40%), Positives = 101/169 (59%), Gaps = 2/169 (1%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           + V+ S+G  AD  +L   +  R   Y+H H + M+   +AQ+LS  +Y +RFFPYY  N
Sbjct: 69  QTVLGSAGCWADTLSLTGSIKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSN 128

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 134
           +L G+DNEGKG VY+YD +G  E+  Y + G+  TL+ P LDNQ+   + + L   D + 
Sbjct: 129 ILAGIDNEGKGVVYSYDPIGHCEKATYRAGGTAGTLLQPVLDNQIGHKN-MNLEDADKI- 186

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            L++  AV +    F SA ERDIYTGD + I ++ K GI    + LR+D
Sbjct: 187 KLTKEWAVSVASDTFISAAERDIYTGDSVLINIITKDGIEVRTLTLRQD 235


>gi|194872539|ref|XP_001973034.1| GG15866 [Drosophila erecta]
 gi|190654817|gb|EDV52060.1| GG15866 [Drosophila erecta]
          Length = 235

 Score =  135 bits (341), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 68/169 (40%), Positives = 99/169 (58%), Gaps = 2/169 (1%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           + V+ S+G  AD  +L   +  R   Y+H H + M+   +AQ+LS  +Y +RFFPYY  N
Sbjct: 69  QTVLGSTGCWADTLSLTGSMKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSN 128

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 134
           +L G+DNEGKG VY+YD +G  E+  Y + G+  TL+ P LDNQ+   +  L  A     
Sbjct: 129 ILAGIDNEGKGVVYSYDPIGHCEKATYRAGGTAGTLLQPVLDNQIGHKNMNLADADK--I 186

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            L++  AV +    F SA ERDIYTGD + I ++   GI  + + LR+D
Sbjct: 187 KLTKERAVSVASDTFISAAERDIYTGDSVLINIITNDGIEVQTLPLRQD 235


>gi|154331019|ref|XP_001561949.1| putative 20S proteasome beta 6 subunit [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134059271|emb|CAM36970.1| putative 20S proteasome beta 6 subunit [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 333

 Score =  135 bits (341), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 73/167 (43%), Positives = 105/167 (62%), Gaps = 5/167 (2%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQM-SCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           MAS+G QAD   LQ+LL  R   YQ+ +  ++ S   +AQLLS  LY++RFFPYY+FN++
Sbjct: 171 MASNGMQADRLQLQQLLKYRIKWYQYNNGGKVPSTKSIAQLLSTVLYHRRFFPYYTFNMI 230

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPL 136
            GLD EG G  Y+YDAVGS E + Y ++GS ++ + P LD  +       +  Q A + +
Sbjct: 231 VGLDEEGHGVCYSYDAVGSTEPLLYGTRGSAASFVEPLLDCLINRQH---MTCQ-APSEM 286

Query: 137 SEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           S+ EA+ ++K  F  A ERDIYTGD +  + + K G+ +E   LRKD
Sbjct: 287 SKEEALVMLKNAFTGAAERDIYTGDSVSFITITKDGVQQESFALRKD 333


>gi|46108556|ref|XP_381336.1| hypothetical protein FG01160.1 [Gibberella zeae PH-1]
          Length = 264

 Score =  135 bits (340), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 73/174 (41%), Positives = 102/174 (58%), Gaps = 7/174 (4%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V++  GF AD +AL+  L     IY+++H K MS    A+ LS  LY KRFFPYYS  +L
Sbjct: 91  VLSVVGFAADGEALRDHLDTICKIYRYRHGKPMSVNACAKRLSTVLYGKRFFPYYSHAML 150

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA---- 132
           GGLD EG+G VY+YD VGSYER    + G+  +LIMPFLDNQ+   +  +  + +     
Sbjct: 151 GGLDEEGRGAVYSYDPVGSYEREQCRAGGAAGSLIMPFLDNQVNFKNQYIPGSGEGHELK 210

Query: 133 ---VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                PL+  E   +VK  F  A ER I  GD L+++++   GI   ++ L+KD
Sbjct: 211 ERERRPLTRTEVETVVKDAFDGAVERHIEVGDNLQMLIITADGIEETFLPLKKD 264


>gi|116206868|ref|XP_001229243.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
 gi|88183324|gb|EAQ90792.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
          Length = 265

 Score =  135 bits (340), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 74/174 (42%), Positives = 103/174 (59%), Gaps = 7/174 (4%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V++  GF AD +AL++ L     +Y+++H K MS    AQ LS  LY KRFFPYYS  +L
Sbjct: 92  VLSVVGFAADGEALKERLDTICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYYSHAIL 151

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA---- 132
           GGLD EG G VY+YD VGSYER    + G+ ++LIMPFLDNQ+   +  +  + +     
Sbjct: 152 GGLDEEGNGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYIPNSGEGHALQ 211

Query: 133 ---VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                PL+ +E   LVK  F  A ER I  GD L+++++   GI    + L+KD
Sbjct: 212 ERERRPLTRSEVEVLVKDAFDGAVERHIEVGDGLQMMIITNDGIEEILLPLKKD 265


>gi|327304499|ref|XP_003236941.1| hypothetical protein TERG_01664 [Trichophyton rubrum CBS 118892]
 gi|326459939|gb|EGD85392.1| hypothetical protein TERG_01664 [Trichophyton rubrum CBS 118892]
          Length = 261

 Score =  135 bits (340), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 78/175 (44%), Positives = 103/175 (58%), Gaps = 10/175 (5%)

Query: 16  CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNV 75
           CV+   GF AD +AL++ L A   +Y++ HNK MS    AQ LS  LY KRFFPYY   +
Sbjct: 90  CVV---GFSADGRALKERLDAIVKMYEYHHNKPMSVRACAQRLSTILYSKRFFPYYVHAI 146

Query: 76  LGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPS---PLLLPAQDA 132
           L G+D EGKG +Y+YD VGSYER    + GS ++L+MPFLDNQ+   +   P       +
Sbjct: 147 LAGVDEEGKGALYSYDPVGSYEREFCRAAGSAASLMMPFLDNQVNFKNQYVPGSGQGNAS 206

Query: 133 VT----PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           V     PLS   A  LV   F S+ ER I  GD L+I+++ K GI   Y  L++D
Sbjct: 207 VARKPEPLSREGAQQLVHDAFTSSVERHIEVGDGLQIMIVTKDGIEEVYRPLKRD 261


>gi|408398080|gb|EKJ77215.1| hypothetical protein FPSE_02589 [Fusarium pseudograminearum CS3096]
          Length = 264

 Score =  135 bits (340), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 73/174 (41%), Positives = 102/174 (58%), Gaps = 7/174 (4%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V++  GF AD +AL+  L     IY+++H K MS    A+ LS  LY KRFFPYYS  +L
Sbjct: 91  VLSVVGFAADGEALRDHLDTICKIYRYRHGKPMSVNACAKRLSTVLYGKRFFPYYSHAML 150

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA---- 132
           GGLD EG+G VY+YD VGSYER    + G+  +LIMPFLDNQ+   +  +  + +     
Sbjct: 151 GGLDEEGRGAVYSYDPVGSYEREQCRAGGAAGSLIMPFLDNQVNFKNQYIPGSGEGHELK 210

Query: 133 ---VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                PL+  E   +VK  F  A ER I  GD L+++++   GI   ++ L+KD
Sbjct: 211 ERERRPLTRTEVETVVKDAFDGAVERHIEVGDNLQMLIITADGIEETFLPLKKD 264


>gi|358388877|gb|EHK26470.1| hypothetical protein TRIVIDRAFT_36186 [Trichoderma virens Gv29-8]
          Length = 264

 Score =  135 bits (340), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 73/174 (41%), Positives = 103/174 (59%), Gaps = 7/174 (4%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V++  GF AD +AL+  L     IY+++H K M+    A+ LS  LY KRFFPYY+  +L
Sbjct: 91  VLSVCGFAADGEALRDRLDTVCKIYRYRHGKPMTLNACAKRLSTILYQKRFFPYYTHAML 150

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT-- 134
           GGLD EGKG VY+YD VGSYER    + G+  +LIMPFLDNQ+   +  +  + +     
Sbjct: 151 GGLDEEGKGAVYSYDPVGSYEREQCRAGGAAGSLIMPFLDNQVNFKNQYIPGSGEGHALK 210

Query: 135 -----PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                PL+  +   LVK  F  A ER I  GD L+++++ K GI   ++ L+KD
Sbjct: 211 ERERHPLTRPQVETLVKDAFDGAVERHIEVGDSLQMLIITKEGIEEVFLPLKKD 264


>gi|365762155|gb|EHN03761.1| Pre7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 241

 Score =  135 bits (339), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 103/177 (58%), Gaps = 7/177 (3%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPGMAQLLSNTLYYKRFFPYY 71
            D  V++++GF AD  AL K        Y   HN K++S    A+ + + LY KRFFPYY
Sbjct: 66  GDNLVVSANGFAADGDALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYY 125

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
              ++ GLD  GKG VY++D VGSYER    + G+ ++LIMPFLDNQ+   +    P  D
Sbjct: 126 VHTIIAGLDENGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-YEPGTD 184

Query: 132 AVTP-----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                    LS  E + LV+  F SATER I  GD LEI+++ K G+ +E+ EL++D
Sbjct: 185 GKVKKPLKYLSVEEVIKLVRDSFTSATERHIQVGDGLEILIVTKDGVKKEFYELKRD 241


>gi|310793289|gb|EFQ28750.1| proteasome A-type and B-type [Glomerella graminicola M1.001]
          Length = 263

 Score =  135 bits (339), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 77/183 (42%), Positives = 105/183 (57%), Gaps = 8/183 (4%)

Query: 9   TSCRADKCVMASS-GFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRF 67
           TS + D  ++ S  GF AD +AL+  L     IY+++H K MS    A+ LS  LY KRF
Sbjct: 81  TSTQEDATILLSVVGFAADGEALKDRLDTICKIYRYRHGKPMSVTACAKRLSTILYQKRF 140

Query: 68  FPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLL 127
           FPYY + +LGGLD EG G V++YD VGSYER    + G+ ++LI PFLDNQ+   +  + 
Sbjct: 141 FPYYVYAILGGLDEEGVGAVFSYDPVGSYEREQSRAGGAAASLITPFLDNQVNFKNQYVP 200

Query: 128 PA-------QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMEL 180
            +       +    PL   EA  LVK  F  A ER I  GD L+++V+ K GI    + L
Sbjct: 201 GSGVGHELQERPRVPLERKEAEILVKDAFDGAVERHIEVGDHLQMMVITKNGIEEVLLPL 260

Query: 181 RKD 183
           +KD
Sbjct: 261 KKD 263


>gi|358395926|gb|EHK45313.1| hypothetical protein TRIATDRAFT_131680 [Trichoderma atroviride IMI
           206040]
          Length = 263

 Score =  135 bits (339), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 73/174 (41%), Positives = 102/174 (58%), Gaps = 7/174 (4%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V++  GF AD +AL+  L     IY+++H K MS    A+ LS  LY KRFFPYY+  +L
Sbjct: 90  VLSVCGFAADGEALRDRLDTICKIYRYRHGKPMSLNACAKRLSTILYQKRFFPYYTHAML 149

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA---- 132
           GGLD EG G VY+YD VGSYER    + G+  +LIMPFLDNQ+   +  +  + +     
Sbjct: 150 GGLDEEGTGAVYSYDPVGSYEREQCRAGGAAGSLIMPFLDNQVNFKNQYIPGSGEGHDLK 209

Query: 133 ---VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                PLS  +   +VK  F  A ER I  GD L+++++ K GI   ++ L+KD
Sbjct: 210 ERERRPLSRPQVETIVKDAFDGAVERHIEVGDTLQMLIITKDGIEEAFLPLKKD 263


>gi|425770053|gb|EKV08528.1| hypothetical protein PDIP_68200 [Penicillium digitatum Pd1]
 gi|425771744|gb|EKV10181.1| hypothetical protein PDIG_58720 [Penicillium digitatum PHI26]
          Length = 259

 Score =  135 bits (339), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 103/177 (58%), Gaps = 11/177 (6%)

Query: 16  CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNV 75
            +++  GF AD  AL++ L     +Y++QH K MS    AQ LS  LY KRFFPYY   +
Sbjct: 85  IILSVVGFAADGNALKEKLDTVVKMYKYQHGKSMSVGACAQRLSTILYEKRFFPYYVHAI 144

Query: 76  LGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSP---------LL 126
           L GLD EG G +Y+YD VGSYER    + G+ S+LIMPFLDNQ+ S +           L
Sbjct: 145 LAGLDEEGVGALYSYDPVGSYEREQCRAAGAASSLIMPFLDNQVNSKNQYIPGSGEGHAL 204

Query: 127 LPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           +P +    PL +  A  LV+  F SA ER I  GD L+++++ + GI   +  L++D
Sbjct: 205 VPKK--AEPLDKETAKKLVQDAFTSAVERHIEVGDGLQMLIVTREGIEEVFHALKQD 259


>gi|167538768|ref|XP_001751043.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163770452|gb|EDQ84148.1| predicted protein [Monosiga brevicollis MX1]
          Length = 120

 Score =  135 bits (339), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 65/122 (53%), Positives = 82/122 (67%), Gaps = 3/122 (2%)

Query: 62  LYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKS 121
           LY KRFFPYY+ N+L GLD EGKGCVY+YD VGSYER  + + G+ S+L+ P LDNQ+  
Sbjct: 2   LYRKRFFPYYTNNILAGLDAEGKGCVYSYDPVGSYEREVFRAAGTASSLLQPLLDNQIGG 61

Query: 122 PSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELR 181
            +   L  QD   PL +  AV LVK  F +A ERDIYTGD + I ++ K G+  E M LR
Sbjct: 62  KN---LANQDGPLPLDKERAVRLVKDIFVAAAERDIYTGDAVHIAIITKDGVTHEEMPLR 118

Query: 182 KD 183
           +D
Sbjct: 119 RD 120


>gi|342879609|gb|EGU80854.1| hypothetical protein FOXB_08721 [Fusarium oxysporum Fo5176]
          Length = 264

 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 72/174 (41%), Positives = 102/174 (58%), Gaps = 7/174 (4%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V++  GF AD +AL+  L     IY+++H K M+    A+ LS  LY KRFFPYYS  +L
Sbjct: 91  VLSVVGFAADGEALRDHLDTICKIYRYRHGKPMTVNACAKRLSTVLYSKRFFPYYSHAML 150

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA---- 132
           GGLD EG+G VY+YD VGSYER    + G+  +LIMPFLDNQ+   +  +  + +     
Sbjct: 151 GGLDEEGRGAVYSYDPVGSYEREQCRAGGAAGSLIMPFLDNQVNFKNQYIPGSGEGHELK 210

Query: 133 ---VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                PL+  E   +VK  F  A ER I  GD L+++++   GI   ++ L+KD
Sbjct: 211 ERERRPLTRTEVETVVKDAFDGAVERHIEVGDNLQMLIITADGIEETFLPLKKD 264


>gi|295672922|ref|XP_002797007.1| proteasome component C5 [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226282379|gb|EEH37945.1| proteasome component C5 [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 266

 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/185 (42%), Positives = 105/185 (56%), Gaps = 27/185 (14%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V++  GF AD +AL++ L A   +Y+++H K MS    AQ LS  LY KRFFPYY   +L
Sbjct: 91  VLSVVGFAADGRALKERLDAVVKMYKYKHGKPMSVKACAQRLSTILYSKRFFPYYVHAIL 150

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL----------------- 119
           GG+D +GKG +Y+YD VGSYER    + G+ ++LIMPFLDNQ+                 
Sbjct: 151 GGIDEDGKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNFKNQYVAGTGEGNALD 210

Query: 120 KSP-SPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYM 178
           K P  P   PA+DA+          LV   F SA ER I  GD L+I+++ K GI   Y 
Sbjct: 211 KQPREPQPQPAEDALQ---------LVNDAFTSAVERHIEVGDGLQIMLITKDGIMEMYH 261

Query: 179 ELRKD 183
            L+KD
Sbjct: 262 PLKKD 266


>gi|429329412|gb|AFZ81171.1| proteasome subunit beta type 1, putative [Babesia equi]
          Length = 218

 Score =  134 bits (338), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 70/171 (40%), Positives = 105/171 (61%), Gaps = 7/171 (4%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D C++ +SG QAD+ AL   +  +  +Y+  H+K  S   +AQLLS  LY +RFFPYY+F
Sbjct: 54  DTCILGTSGMQADMLALHSAMERQVELYRFTHHKTPSFGAIAQLLSTILYSRRFFPYYTF 113

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N+L G+D  G G V +YDA+G+Y    Y++QG+ S+LI    D Q+   + L+ P   ++
Sbjct: 114 NILCGIDENGNGVVCSYDAIGNYNYEKYAAQGTSSSLITSIFDCQINGNNCLVKPEIKSL 173

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREY-MELRKD 183
             L     V+++K   ASA ERDIYTGD  ++V+ + G +H    M+LR D
Sbjct: 174 EDL-----VNIIKNALASAVERDIYTGDSAQVVICD-GIVHEPVIMDLRID 218


>gi|296805321|ref|XP_002843485.1| proteasome component C5 [Arthroderma otae CBS 113480]
 gi|238844787|gb|EEQ34449.1| proteasome component C5 [Arthroderma otae CBS 113480]
          Length = 261

 Score =  134 bits (338), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 75/175 (42%), Positives = 102/175 (58%), Gaps = 10/175 (5%)

Query: 16  CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNV 75
           CV+   GF AD +AL++ L A   +Y++ HNK MS    AQ LS  LY KRFFPYY   +
Sbjct: 90  CVV---GFSADGRALKERLDAIVKMYEYHHNKPMSVRACAQRLSTILYSKRFFPYYVHAI 146

Query: 76  LGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT- 134
           L G+D EGKG +Y+YD VGSYER    + GS ++L+MPFLDNQ+   +  +  +      
Sbjct: 147 LAGVDEEGKGALYSYDPVGSYEREFCRAAGSAASLMMPFLDNQVNFKNQYVAGSGQGNAS 206

Query: 135 ------PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                 PLS   A  LV   F S+ ER I  GD L+++++ K GI   Y  L++D
Sbjct: 207 VPRKPEPLSREGAQQLVHDAFTSSVERHIEVGDGLQMMIVTKDGIEEVYRPLKRD 261


>gi|346975013|gb|EGY18465.1| proteasome component C5 [Verticillium dahliae VdLs.17]
          Length = 264

 Score =  134 bits (338), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 77/183 (42%), Positives = 107/183 (58%), Gaps = 8/183 (4%)

Query: 9   TSCRADKCVMASS-GFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRF 67
           TS + D  ++ S  GF AD +AL++ L A   IY+++H K MS    A+ LS  LY KRF
Sbjct: 82  TSNQDDATILLSVVGFAADGEALKERLDAICKIYRYRHGKAMSVTACAKRLSTILYQKRF 141

Query: 68  FPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLL 127
           FPYY + +LGGLD +G G V++YD VGSYER    + G+ ++LI PFLDNQ+   +  + 
Sbjct: 142 FPYYVYAILGGLDEKGVGAVFSYDPVGSYEREQSRAGGAAASLITPFLDNQVNFKNQYVP 201

Query: 128 PA-------QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMEL 180
            +       +  V PL   EA  LVK  F  A ER I  GD L+++V+   GI    + L
Sbjct: 202 GSGVGHELKEREVVPLERKEAEILVKDAFDGAVERHIEVGDALQMMVITSKGIEEILLPL 261

Query: 181 RKD 183
           +KD
Sbjct: 262 KKD 264


>gi|367001675|ref|XP_003685572.1| hypothetical protein TPHA_0E00420 [Tetrapisispora phaffii CBS 4417]
 gi|357523871|emb|CCE63138.1| hypothetical protein TPHA_0E00420 [Tetrapisispora phaffii CBS 4417]
          Length = 241

 Score =  134 bits (338), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 71/176 (40%), Positives = 106/176 (60%), Gaps = 5/176 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPGMAQLLSNTLYYKRFFPYY 71
            D  +++++GF AD +AL K        Y   +N K+++    A+ + + LY KRFFPYY
Sbjct: 66  GDDIIISANGFAADGEALVKRFKNSIKWYHFDNNDKKLALSSAARNIQHLLYGKRFFPYY 125

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
              ++ GLD EGKG VY++D VGSYER    + G+ ++LIMPFLDNQ+   +     +  
Sbjct: 126 VHTIIAGLDEEGKGAVYSFDPVGSYEREFCRAGGAAASLIMPFLDNQVNFKNQYTPDSNG 185

Query: 132 AVTP----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            V      LS  E + LV+  F SATER I+ GD LEI+++ K G+ +E+ EL++D
Sbjct: 186 KVKRPFKHLSIDEVIKLVRDAFTSATERHIHVGDGLEILIVTKEGVRKEFYELKRD 241


>gi|125977126|ref|XP_001352596.1| GA17955 [Drosophila pseudoobscura pseudoobscura]
 gi|195168113|ref|XP_002024876.1| GL17976 [Drosophila persimilis]
 gi|54641344|gb|EAL30094.1| GA17955 [Drosophila pseudoobscura pseudoobscura]
 gi|194108306|gb|EDW30349.1| GL17976 [Drosophila persimilis]
          Length = 235

 Score =  134 bits (338), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 68/171 (39%), Positives = 105/171 (61%), Gaps = 2/171 (1%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           +++ V+AS+G   D  +L  L+  R   Y+H H K M+   +AQ+LS  +Y +RFFPYY 
Sbjct: 67  SNQTVLASTGCWCDTLSLTGLMKLRMQNYEHTHLKTMTTDAVAQMLSIIMYNRRFFPYYV 126

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            N+L G+D +GKG V++YD +G  ER  Y + G+   L+ P LDNQ+   + + L  +DA
Sbjct: 127 SNILAGIDKDGKGVVFSYDPIGHCERATYRAGGTAGALLQPVLDNQIGYKN-MNLHGEDA 185

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              +++  AV +    F SA ERDIYTGD + I ++ K GI  + ++LR+D
Sbjct: 186 -PEVTKERAVAVASDTFISAAERDIYTGDSVLINIITKDGIETQELQLRQD 235


>gi|385303180|gb|EIF47271.1| proteasome component c5 [Dekkera bruxellensis AWRI1499]
          Length = 243

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 71/175 (40%), Positives = 103/175 (58%), Gaps = 4/175 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            D  +++++GF AD   L K+   +   Y   +NK MS    A+L+ + LY KR FPYY 
Sbjct: 69  GDNLLLSANGFSADGVQLVKVFQNQLKWYHFDNNKDMSVDSAARLIQHLLYGKRMFPYYV 128

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA--- 129
             +L GLD EGKG +Y++D VGSYER    + G+ ++LIMPFLDNQ+   + +   +   
Sbjct: 129 STILAGLDKEGKGAIYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQMDPESNGT 188

Query: 130 -QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            Q  +  L   E + LV+  F SATER I  GD L+I+V+ K G+  EY  L++D
Sbjct: 189 KQRPIKYLKLDEVIQLVRDAFTSATERHIEVGDGLQILVVTKDGVXTEYYPLKRD 243


>gi|225711612|gb|ACO11652.1| Proteasome subunit beta type-1 precursor [Caligus rogercresseyi]
          Length = 238

 Score =  134 bits (337), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 68/168 (40%), Positives = 98/168 (58%), Gaps = 4/168 (2%)

Query: 16  CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNV 75
           CV+ S G   DV    ++  ++   Y + H K+++ P +AQ+LSNTLY +RFFPYY  NV
Sbjct: 75  CVLGSCGCWCDVLTFIRVAESKLKDYHYTHGKELNTPALAQMLSNTLYRRRFFPYYIHNV 134

Query: 76  LGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP 135
           L GLD +G+G +YTYD VG  E+V  S  G+   LI P LDN ++  +         +  
Sbjct: 135 LAGLDEKGQGVIYTYDPVGHCEKVKMSCGGTSMELIQPILDNIVEKKN----MTNGTMKD 190

Query: 136 LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           LS  E V+++  CF SA ER I TGD +   ++ K GI  + + LR+D
Sbjct: 191 LSIDETVNIIHDCFISAAERQIQTGDGIMFKIITKEGIETKSVGLRRD 238


>gi|302501484|ref|XP_003012734.1| hypothetical protein ARB_00985 [Arthroderma benhamiae CBS 112371]
 gi|302660909|ref|XP_003022128.1| hypothetical protein TRV_03731 [Trichophyton verrucosum HKI 0517]
 gi|291176294|gb|EFE32094.1| hypothetical protein ARB_00985 [Arthroderma benhamiae CBS 112371]
 gi|291186059|gb|EFE41510.1| hypothetical protein TRV_03731 [Trichophyton verrucosum HKI 0517]
          Length = 261

 Score =  134 bits (337), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/175 (44%), Positives = 103/175 (58%), Gaps = 10/175 (5%)

Query: 16  CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNV 75
           CV+   GF AD +AL++ L A   +Y++ HNK MS    AQ LS  LY KRFFPYY   +
Sbjct: 90  CVV---GFSADGRALKERLDAIVKMYEYHHNKPMSVRACAQRLSTILYSKRFFPYYVHAI 146

Query: 76  LGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPS---PLLLPAQDA 132
           L G+D EGKG +Y+YD VGSYER    + GS ++L+MPFLDNQ+   +   P       +
Sbjct: 147 LAGVDEEGKGALYSYDPVGSYEREFCRAAGSAASLMMPFLDNQVNFKNQYVPGSGQGNAS 206

Query: 133 VT----PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           V     PLS   A  LV   F S+ ER I  GD L+++++ K GI   Y  L++D
Sbjct: 207 VARKPEPLSREGAQQLVHDAFTSSVERHIEVGDGLQMMIVTKDGIEEVYRPLKRD 261


>gi|315045602|ref|XP_003172176.1| proteasome component C5 [Arthroderma gypseum CBS 118893]
 gi|311342562|gb|EFR01765.1| proteasome component C5 [Arthroderma gypseum CBS 118893]
          Length = 261

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/175 (44%), Positives = 103/175 (58%), Gaps = 10/175 (5%)

Query: 16  CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNV 75
           CV+   GF AD +AL++ L A   +Y++ HNK MS    AQ LS  LY KRFFPYY   +
Sbjct: 90  CVV---GFSADGRALKERLDAIVKMYEYHHNKPMSVRACAQRLSTILYSKRFFPYYVHAI 146

Query: 76  LGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPS---PLLLPAQDA 132
           L G+D EGKG +Y+YD VGSYER    + GS ++L+MPFLDNQ+   +   P       +
Sbjct: 147 LAGVDEEGKGALYSYDPVGSYEREFCRAAGSAASLMMPFLDNQVNFKNQYVPGSGQGNAS 206

Query: 133 VT----PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           V     PLS   A  LV   F S+ ER I  GD L+++++ K GI   Y  L++D
Sbjct: 207 VARKPEPLSREGAQQLVHDAFTSSVERHIEVGDGLQMMIVTKDGIEEVYRPLKRD 261


>gi|157864139|ref|XP_001680783.1| putative 20S proteasome beta 6 subunit [Leishmania major strain
           Friedlin]
 gi|68124075|emb|CAJ02057.1| putative 20S proteasome beta 6 subunit [Leishmania major strain
           Friedlin]
          Length = 247

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/167 (43%), Positives = 103/167 (61%), Gaps = 5/167 (2%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMS-CPGMAQLLSNTLYYKRFFPYYSFNVL 76
           MAS+G QAD   LQ++L  R   YQ+ +  ++     +AQL+S  LY++RFFPYY+FN++
Sbjct: 85  MASNGMQADRLQLQQMLKYRVKWYQYNNGGKVPPTKAIAQLMSTMLYHRRFFPYYTFNMV 144

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPL 136
            GLD EG G  Y+YDAVGS E   Y ++GS ++ + P LD  +       + AQ A   +
Sbjct: 145 VGLDEEGHGVCYSYDAVGSTEPFLYGTRGSAASFLEPVLDCLINRQH---MTAQ-APPEM 200

Query: 137 SEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           ++ E + L+K  F  A ERDIYTGD +   ++ K G+ RE  ELRKD
Sbjct: 201 TKEETLALLKNAFTGAAERDIYTGDSVSFFIITKDGVQRESFELRKD 247


>gi|67539228|ref|XP_663388.1| hypothetical protein AN5784.2 [Aspergillus nidulans FGSC A4]
 gi|40743687|gb|EAA62877.1| hypothetical protein AN5784.2 [Aspergillus nidulans FGSC A4]
 gi|259484727|tpe|CBF81196.1| TPA: putative proteasome core component, beta 6 subunit (Eurofung)
           [Aspergillus nidulans FGSC A4]
          Length = 261

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 76/181 (41%), Positives = 102/181 (56%), Gaps = 7/181 (3%)

Query: 10  SCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFP 69
           + +    +++  GF AD  AL++ L A   +Y++QH K MS    AQ LS  LY KRFFP
Sbjct: 81  TGKGAHILLSVVGFAADGLALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFP 140

Query: 70  YYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA 129
           YY   +L GLD EGKG +Y YD VGSYER    S G+ S+LIMPFLDNQ+   +  +  +
Sbjct: 141 YYVQAILAGLDEEGKGALYGYDPVGSYEREQCRSAGAASSLIMPFLDNQVNLKNQYIPGS 200

Query: 130 QDA-------VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRK 182
            +          P+S      LV+  F SA ER I  GD L+++V+   GI   Y  L+K
Sbjct: 201 GEGHALEARKPEPMSRETVEQLVRDAFTSAVERHIEVGDGLQMLVITADGIEEVYHPLKK 260

Query: 183 D 183
           D
Sbjct: 261 D 261


>gi|401415060|ref|XP_003872026.1| putative 20S proteasome beta 6 subunit [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|322488248|emb|CBZ23493.1| putative 20S proteasome beta 6 subunit [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 247

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/183 (40%), Positives = 107/183 (58%), Gaps = 14/183 (7%)

Query: 11  CRADK---------CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMS-CPGMAQLLSN 60
           CR D+           MAS+G QAD   LQ++L  R   YQ+ +  ++     +AQL+S 
Sbjct: 69  CRHDQSKIFQLTPYTYMASNGMQADRVQLQQMLKYRVKWYQYNNGGKVPPTKAIAQLMST 128

Query: 61  TLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK 120
            LY++RFFPYY+FN++ GLD EG G  Y+YDAVGS E   Y ++GS ++ + P LD  + 
Sbjct: 129 MLYHRRFFPYYTFNMIVGLDEEGNGVCYSYDAVGSTEPFLYGTRGSAASFLEPVLDCLIN 188

Query: 121 SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMEL 180
                 + AQ A   +++ E + ++K  F  A ERDIYTGD +   ++ K G+ RE  EL
Sbjct: 189 RQH---MTAQ-APPEMTKEETLAMLKNAFTGAAERDIYTGDSVSFFIITKDGVQRESFEL 244

Query: 181 RKD 183
           RKD
Sbjct: 245 RKD 247


>gi|240273184|gb|EER36706.1| proteasome component [Ajellomyces capsulatus H143]
 gi|325089210|gb|EGC42520.1| proteasome component [Ajellomyces capsulatus H88]
          Length = 266

 Score =  133 bits (335), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 75/184 (40%), Positives = 103/184 (55%), Gaps = 25/184 (13%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V++  GF AD +AL++ L A   +Y+++H K MS    AQ L+  LY KRFFPYY   +L
Sbjct: 91  VLSVVGFAADGRALKERLDAIVKMYKYKHGKPMSVNACAQRLATILYSKRFFPYYVHAIL 150

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL----------------- 119
            G+D +GKG +Y+YD VGSYER    + G+ ++LIMPFLDNQ+                 
Sbjct: 151 AGMDEDGKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNFKNQYLPGSGEGNAMD 210

Query: 120 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYME 179
           K P P   P +D         A+ LV   F SA ER I  GD L+++V+ + GI   Y  
Sbjct: 211 KQPRPSEPPPRDV--------ALQLVNDAFTSAVERHIEVGDGLQVMVITREGIQEIYHP 262

Query: 180 LRKD 183
           L+KD
Sbjct: 263 LKKD 266


>gi|225554384|gb|EEH02683.1| proteasome component C5 [Ajellomyces capsulatus G186AR]
          Length = 266

 Score =  133 bits (335), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 75/184 (40%), Positives = 103/184 (55%), Gaps = 25/184 (13%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V++  GF AD +AL++ L A   +Y+++H K MS    AQ L+  LY KRFFPYY   +L
Sbjct: 91  VLSVVGFAADGRALKERLDAIVKMYKYKHGKPMSVNACAQRLATILYSKRFFPYYVHAIL 150

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL----------------- 119
            G+D +GKG +Y+YD VGSYER    + G+ ++LIMPFLDNQ+                 
Sbjct: 151 AGMDEDGKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNFKNQYLPGSGEGNAMD 210

Query: 120 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYME 179
           K P P   P +D         A+ LV   F SA ER I  GD L+++V+ + GI   Y  
Sbjct: 211 KQPRPSEPPPRDV--------ALQLVNDAFTSAVERHIEVGDGLQVMVITREGIQEIYHP 262

Query: 180 LRKD 183
           L+KD
Sbjct: 263 LKKD 266


>gi|363755242|ref|XP_003647836.1| hypothetical protein Ecym_7171 [Eremothecium cymbalariae
           DBVPG#7215]
 gi|356891872|gb|AET41019.1| hypothetical protein Ecym_7171 [Eremothecium cymbalariae
           DBVPG#7215]
          Length = 242

 Score =  133 bits (335), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 71/177 (40%), Positives = 103/177 (58%), Gaps = 7/177 (3%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPGMAQLLSNTLYYKRFFPYY 71
            D  +++++GF AD  AL K        Y   HN K+M+    A+ + + LY KR FPYY
Sbjct: 67  GDNILISANGFAADGDALVKKFKNNLKWYHFDHNNKKMTLKSAARNIQHLLYGKRMFPYY 126

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
              ++ GLD +GKG VY++D VGSYER    + G+ +++IMPFLDNQ+   +    P   
Sbjct: 127 VHTIIAGLDEDGKGAVYSFDPVGSYEREQCRAGGAAASIIMPFLDNQVNFKNQ-YEPDSK 185

Query: 132 AVTP-----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              P     LS  E ++LV+  F SATER I+ GD L+I+++ K G+  EY  L+KD
Sbjct: 186 GTKPKSIRFLSLDEVIELVRDAFTSATERHIHVGDSLQIMIITKEGVKEEYHSLKKD 242


>gi|339246829|ref|XP_003375048.1| proteasome subunit beta type-1 [Trichinella spiralis]
 gi|316971688|gb|EFV55434.1| proteasome subunit beta type-1 [Trichinella spiralis]
          Length = 297

 Score =  133 bits (335), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 70/169 (41%), Positives = 99/169 (58%), Gaps = 4/169 (2%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           K  M  +GFQ D+  L K+L  R   Y    N+ M     AQLLS TLY++RFFPYY   
Sbjct: 133 KVYMTGTGFQGDMIQLVKVLRTRIQQYLFTFNEYMDIHAAAQLLSRTLYFRRFFPYYVGA 192

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 134
           ++GG+D +G+G +Y+YD VG+ E + YS+QG GS LI PF DNQ+   +    P Q    
Sbjct: 193 IIGGIDRDGRGVLYSYDPVGTIEELPYSAQGEGSYLIEPFFDNQIGWKTQ---PEQTK-Q 248

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           PLS+  A  L+   F S  ER+  TGD +++VVL+   +    +++R D
Sbjct: 249 PLSKERAQQLMHDAFISTIEREKSTGDAVQMVVLHGDRVEEHILKMRTD 297


>gi|254586379|ref|XP_002498757.1| ZYRO0G17842p [Zygosaccharomyces rouxii]
 gi|238941651|emb|CAR29824.1| ZYRO0G17842p [Zygosaccharomyces rouxii]
          Length = 244

 Score =  133 bits (335), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 72/176 (40%), Positives = 105/176 (59%), Gaps = 5/176 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPGMAQLLSNTLYYKRFFPYY 71
            D  V+ ++G+ AD +AL K        Y   HN K++S    A+ + + LY KRFFPYY
Sbjct: 69  GDNIVITANGYAADGEALVKRFKNSVKWYHFDHNDKKLSLNSAARNIQHLLYGKRFFPYY 128

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
              ++ GLD EGKG VY++D VGSYER    + G+ ++LIMPFLDNQ+   +  +  +  
Sbjct: 129 VQTIIAGLDEEGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFHNQYVPESNG 188

Query: 132 AVTP----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            V      LS  E + LV+  F SATER I  GD LEI+++ K G+ +++ EL++D
Sbjct: 189 RVKRPLKFLSVDEVIRLVRDAFTSATERHIQVGDGLEILIVTKDGVTKQFYELKRD 244


>gi|326472775|gb|EGD96784.1| hypothetical protein TESG_04214 [Trichophyton tonsurans CBS 112818]
 gi|326484951|gb|EGE08961.1| proteasome component C5 [Trichophyton equinum CBS 127.97]
          Length = 261

 Score =  133 bits (334), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 76/175 (43%), Positives = 103/175 (58%), Gaps = 10/175 (5%)

Query: 16  CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNV 75
           CV+   GF AD +AL++ L A   +Y++ HNK MS    AQ LS  LY KRFFPYY   +
Sbjct: 90  CVV---GFSADGRALKERLDAIVKMYEYHHNKPMSVRACAQRLSTILYSKRFFPYYVHAI 146

Query: 76  LGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPS---PLLLPAQDA 132
           L G+D EGKG +Y+YD VGSYER    + GS ++L+MPFLDNQ+   +   P       +
Sbjct: 147 LAGVDEEGKGALYSYDPVGSYEREFCRAAGSAASLMMPFLDNQVNFKNQYVPGSGQGNAS 206

Query: 133 VT----PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           V     PLS   A  LV   F S+ ER I  GD L+++++ + GI   Y  L++D
Sbjct: 207 VARKPEPLSREGAQQLVHDAFTSSVERHIEVGDGLQMMIVTRDGIEEVYRPLKRD 261


>gi|323445273|gb|EGB01969.1| hypothetical protein AURANDRAFT_9896 [Aureococcus anophagefferens]
          Length = 150

 Score =  133 bits (334), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 59/101 (58%), Positives = 77/101 (76%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V+A++G Q DV  L  +L  R  +Y+HQ  K M+   +AQ+L NTLYYKRFFPYY+FNVL
Sbjct: 50  VLAAAGCQTDVVCLVDVLKTRQKMYKHQTGKNMTTTSIAQMLGNTLYYKRFFPYYAFNVL 109

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDN 117
            G+D EGKGCVY+YDA+GS+ERV +S+ GSG + I+P LDN
Sbjct: 110 AGVDKEGKGCVYSYDAIGSFERVPFSASGSGQSYIIPLLDN 150


>gi|154278896|ref|XP_001540261.1| proteasome component C5 [Ajellomyces capsulatus NAm1]
 gi|150412204|gb|EDN07591.1| proteasome component C5 [Ajellomyces capsulatus NAm1]
          Length = 266

 Score =  133 bits (334), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 75/184 (40%), Positives = 103/184 (55%), Gaps = 25/184 (13%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V++  GF AD +AL++ L A   +Y+++H K MS    AQ L+  LY KRFFPYY   +L
Sbjct: 91  VLSVVGFAADGRALKERLDAIVKMYKYKHGKPMSVNACAQRLATILYSKRFFPYYVHAIL 150

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL----------------- 119
            G+D +GKG +Y+YD VGSYER    + G+ ++LIMPFLDNQ+                 
Sbjct: 151 AGMDEDGKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNFKNQYLPGSGEGNAMD 210

Query: 120 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYME 179
           K P P   P +D         A+ LV   F SA ER I  GD L+++V+ + GI   Y  
Sbjct: 211 KQPRPSEPPPRDV--------ALQLVNDAFTSAVERHIEVGDGLQVMVITREGIQEIYHP 262

Query: 180 LRKD 183
           L+KD
Sbjct: 263 LKKD 266


>gi|398010249|ref|XP_003858322.1| proteasome beta 6 subunit, putative [Leishmania donovani]
 gi|322496529|emb|CBZ31598.1| proteasome beta 6 subunit, putative [Leishmania donovani]
          Length = 247

 Score =  133 bits (334), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 71/167 (42%), Positives = 103/167 (61%), Gaps = 5/167 (2%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMS-CPGMAQLLSNTLYYKRFFPYYSFNVL 76
           MAS+G QAD   LQ++L  R   YQ+ +  ++     +AQL+S  LY++RFFPYY+FN++
Sbjct: 85  MASNGMQADRLQLQQMLKYRVKWYQYNNGGRVPPTKAIAQLMSTMLYHRRFFPYYTFNMV 144

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPL 136
            GLD EG G  Y+YDAVGS E   Y ++GS ++ + P LD  +       + AQ A   +
Sbjct: 145 VGLDEEGHGVCYSYDAVGSTEPFLYGTRGSAASFLEPVLDCLINRQH---MTAQ-APPEM 200

Query: 137 SEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           ++ E + ++K  F  A ERDIYTGD +   ++ K G+ RE  ELRKD
Sbjct: 201 TKEETLAMLKNAFTGAAERDIYTGDSVSFFIITKDGVQRESFELRKD 247


>gi|322708662|gb|EFZ00239.1| proteasome component C5 [Metarhizium anisopliae ARSEF 23]
          Length = 263

 Score =  133 bits (334), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 75/183 (40%), Positives = 105/183 (57%), Gaps = 8/183 (4%)

Query: 9   TSCRADKCVMAS-SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRF 67
           TS + D  ++ S  GF AD  AL+  L     IY+++H K M+    A+ LS  LY KRF
Sbjct: 81  TSSQDDATIVLSVCGFAADGTALRDQLDTICKIYRYRHGKPMTLNACAKRLSTILYQKRF 140

Query: 68  FPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLL 127
           FPYY   +LGGLD EGKG VY+YD VGSYER    + G+  +LIMPFLDNQ+   +  + 
Sbjct: 141 FPYYVTAMLGGLDEEGKGAVYSYDPVGSYEREQCRAGGAAGSLIMPFLDNQVNFKNQYVP 200

Query: 128 PAQDAVT-------PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMEL 180
            + +          PLS A+   ++K  F  A ER I  GD L+++++ K GI    + +
Sbjct: 201 GSGEGHNLQERERHPLSRAQVETIIKDAFDGAVERHIEVGDALQMLIITKDGIEETILPM 260

Query: 181 RKD 183
           +KD
Sbjct: 261 KKD 263


>gi|84996531|ref|XP_952987.1| proteasome subunit [Theileria annulata strain Ankara]
 gi|65303983|emb|CAI76362.1| proteasome subunit, putative [Theileria annulata]
          Length = 199

 Score =  133 bits (334), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 66/149 (44%), Positives = 97/149 (65%), Gaps = 5/149 (3%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            DKC++ +SG QAD+ ALQ +L  +  +Y+  HN++ +   +AQLLS  LY +RFFPYY+
Sbjct: 53  TDKCILGTSGMQADMLALQSVLERQIELYRFTHNREPTFNAIAQLLSTVLYGRRFFPYYT 112

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FN+L G+D +GKG V  YDAVG+Y    Y++QG+ S+L++  LDN L   +  + P  ++
Sbjct: 113 FNILCGIDEQGKGVVCGYDAVGNYNYEKYTAQGTSSSLVISVLDNLLNGNNQKVKPEVNS 172

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGD 161
           +  L     V+LVK    SA ERDI TG+
Sbjct: 173 LEDL-----VNLVKNAMVSAVERDICTGN 196


>gi|146070767|ref|XP_001463096.1| putative 20S proteasome beta 6 subunit [Leishmania infantum JPCM5]
 gi|134067179|emb|CAM65445.1| putative 20S proteasome beta 6 subunit [Leishmania infantum JPCM5]
          Length = 247

 Score =  133 bits (334), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 71/167 (42%), Positives = 103/167 (61%), Gaps = 5/167 (2%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMS-CPGMAQLLSNTLYYKRFFPYYSFNVL 76
           MAS+G QAD   LQ++L  R   YQ+ +  ++     +AQL+S  LY++RFFPYY+FN++
Sbjct: 85  MASNGMQADRLQLQQMLKYRVKWYQYNNGGRVPPTKAIAQLMSTLLYHRRFFPYYTFNMV 144

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPL 136
            GLD EG G  Y+YDAVGS E   Y ++GS ++ + P LD  +       + AQ A   +
Sbjct: 145 VGLDEEGHGVCYSYDAVGSTEPFLYGTRGSAASFLEPVLDCLINRQH---MTAQ-APPEM 200

Query: 137 SEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           ++ E + ++K  F  A ERDIYTGD +   ++ K G+ RE  ELRKD
Sbjct: 201 TKEETLAMLKNAFTGAAERDIYTGDSVSFFIITKDGVQRESFELRKD 247


>gi|400601377|gb|EJP69020.1| proteasome A-type and B-type [Beauveria bassiana ARSEF 2860]
          Length = 262

 Score =  132 bits (333), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 70/174 (40%), Positives = 104/174 (59%), Gaps = 7/174 (4%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V++  GF AD  AL+  L     IY+++H K M+    A+ LS  LY KRFFPYY+  +L
Sbjct: 89  VLSVCGFAADGDALRDRLDTICKIYRYRHGKPMTLNACAKRLSTILYQKRFFPYYTHALL 148

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA------- 129
           GGLD EGKG +Y+YD VGSYER    + G+ ++LIMPFLDNQ+   +  +  +       
Sbjct: 149 GGLDEEGKGAIYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFRNQYIPGSGTGHDLQ 208

Query: 130 QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           +    PL+  +   ++K  F  A ER I  GD L++++++K GI   ++ L+KD
Sbjct: 209 ERPREPLTRPQVETIIKDAFDGAAERHIEVGDALQMLIVSKNGIEEVFVPLKKD 262


>gi|449295464|gb|EMC91486.1| hypothetical protein BAUCODRAFT_117991 [Baudoinia compniacensis
           UAMH 10762]
          Length = 265

 Score =  132 bits (333), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 75/180 (41%), Positives = 106/180 (58%), Gaps = 8/180 (4%)

Query: 12  RADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYY 71
           +  K V++  GF AD +ALQ+ L     +Y++QH  ++S    AQ LS+ LY KRFFPYY
Sbjct: 86  KGSKIVLSVVGFAADGRALQERLDTVVKMYRYQHGCEISVKACAQRLSHILYNKRFFPYY 145

Query: 72  SFNVLGGLDNE-GKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK-----SPSPL 125
              +LGG+D E G+G +Y+YD VGSYER    + G+ ++LIMPFLDNQ+       P+ +
Sbjct: 146 VQAILGGIDEETGEGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNLKNQYEPAAV 205

Query: 126 --LLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                 Q    PL   +  +LV+  F SA ER I  GD L+++ + K GI   Y  L+KD
Sbjct: 206 SGFDKKQLVPQPLERPQVEELVRDAFTSAVERHIEVGDGLQMMFITKEGIEEVYFPLKKD 265


>gi|402077428|gb|EJT72777.1| proteasome component C5 [Gaeumannomyces graminis var. tritici
           R3-111a-1]
          Length = 264

 Score =  132 bits (333), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 75/175 (42%), Positives = 103/175 (58%), Gaps = 9/175 (5%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V++  GF AD +AL++ L A   +Y+++H K MS    A+ LS  LY KRFFPYY+  +L
Sbjct: 91  VLSVVGFAADGEALKERLDAICKMYRYRHGKPMSAKACAKRLSTILYQKRFFPYYTHAIL 150

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPL 136
            GLD EGKG VY+YD VGSYER    + G+ ++LIMPFLDNQ+   +   +P       L
Sbjct: 151 AGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKN-QYIPGSGEGHDL 209

Query: 137 SEAEAVD--------LVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            E E V         LVK  F  A ER I  GD L+++++ K GI    + L++D
Sbjct: 210 QERERVPLPRDQVEILVKDAFDGAVERHIEVGDGLQMMIITKDGIEEVILPLKQD 264


>gi|401887735|gb|EJT51714.1| 20S proteasome beta-type subunit, Pre7p [Trichosporon asahii var.
           asahii CBS 2479]
          Length = 251

 Score =  132 bits (333), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 68/162 (41%), Positives = 96/162 (59%), Gaps = 3/162 (1%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            DK V+A++GF AD     K +  R   Y+  H+KQMS   +A+++   LY +RFFPYY 
Sbjct: 47  TDKVVLATNGFAADGNNFYKRVKQRLEWYEANHHKQMSIKSIARMIQTMLYGRRFFPYYV 106

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           +N+LGG++ +G G VY++D VGSYER    + G+  +LI PFLDNQ+   +    P    
Sbjct: 107 YNILGGIEEDGTGAVYSFDPVGSYEREACRAAGAAQSLIQPFLDNQIYFRNQTFPPGVPR 166

Query: 133 VTP--LSEAEAVDLVKTCFASATERDIYTGDKLEI-VVLNKG 171
             P  L     + +V   F SATER I  GD LE+ +V+NKG
Sbjct: 167 PIPGNLPLGTVISIVLDSFTSATERHIEVGDSLEMYIVMNKG 208


>gi|406699677|gb|EKD02876.1| 20S proteasome beta-type subunit, Pre7p [Trichosporon asahii var.
           asahii CBS 8904]
          Length = 251

 Score =  132 bits (333), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 67/162 (41%), Positives = 96/162 (59%), Gaps = 3/162 (1%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            DK V+A++GF AD     K +  R   Y+  H+KQMS   +A+++   LY +RFFPYY 
Sbjct: 47  TDKVVLATNGFAADGNNFYKRVKQRLEWYEANHHKQMSIKSIARMIQTMLYGRRFFPYYV 106

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           +N+LGG++ +G G +Y++D VGSYER    + G+  +LI PFLDNQ+   +    P    
Sbjct: 107 YNILGGIEEDGTGAIYSFDPVGSYEREACRAAGAAQSLIQPFLDNQIYFKNQTFPPGVPR 166

Query: 133 VTP--LSEAEAVDLVKTCFASATERDIYTGDKLEI-VVLNKG 171
             P  L     + +V   F SATER I  GD LE+ +V+NKG
Sbjct: 167 PIPGNLPLGTVISIVLDSFTSATERHIEVGDSLEMYIVMNKG 208


>gi|126274560|ref|XP_001387579.1| predicted protein [Scheffersomyces stipitis CBS 6054]
 gi|126213449|gb|EAZ63556.1| proteasome subunit [Scheffersomyces stipitis CBS 6054]
          Length = 242

 Score =  132 bits (333), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 73/177 (41%), Positives = 105/177 (59%), Gaps = 7/177 (3%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPGMAQLLSNTLYYKRFFPYY 71
            D  VM ++GF AD  AL      +   Y+  H  K+++    A+ + + LY KRFFPYY
Sbjct: 67  GDDIVMTANGFAADGAALIDRFKNQLQWYKFDHGGKKLNIKSAARYIQHLLYGKRFFPYY 126

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
              ++ GLD EGKG VY+YD VGSYER    + G+ ++LIMPFLDNQ+   +    P  D
Sbjct: 127 VSTLIAGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-YEPGSD 185

Query: 132 A-----VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                 +  L+  E ++LV+  F+SATER I  GD LEI+++ K G+  EY +L++D
Sbjct: 186 GKKKRELRYLTLDEVLELVRDAFSSATERHIQVGDGLEILIVTKEGVRTEYFDLKRD 242


>gi|429856646|gb|ELA31546.1| proteasome component c5 [Colletotrichum gloeosporioides Nara gc5]
          Length = 264

 Score =  132 bits (333), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 74/183 (40%), Positives = 105/183 (57%), Gaps = 8/183 (4%)

Query: 9   TSCRADKCVMASS-GFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRF 67
           TS + D  ++ S  GF AD +AL+  L     IY+++H K MS    A+ LS  LY KRF
Sbjct: 82  TSSQEDATILLSVVGFAADGEALKDRLDTICKIYRYRHGKPMSVTACAKRLSTILYQKRF 141

Query: 68  FPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLL 127
           FPYY + +LGGLD +G G V++YD VGSYER    + G+ ++LI PFLDNQ+   +  + 
Sbjct: 142 FPYYVYAILGGLDEDGVGAVFSYDPVGSYEREQSRAGGAAASLITPFLDNQVNFKNQYVP 201

Query: 128 PA-------QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMEL 180
            +       +    PL   EA  LVK  F  A ER I  GD L+++++ K G+    + L
Sbjct: 202 GSGVGHELQERPRVPLERKEAEILVKDAFDGAVERHIEVGDHLQMMIITKNGVEEVLLPL 261

Query: 181 RKD 183
           +KD
Sbjct: 262 KKD 264


>gi|399219027|emb|CCF75914.1| unnamed protein product [Babesia microti strain RI]
          Length = 214

 Score =  132 bits (333), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 69/170 (40%), Positives = 103/170 (60%), Gaps = 5/170 (2%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+ ++ ++G  AD  AL K L A+  IYQ++H++      ++QLLS  LY KRFFPYY+F
Sbjct: 50  DRIIIGTAGMNADTIALHKQLEAQVTIYQNKHHENPDIHCISQLLSVILYGKRFFPYYTF 109

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N+L G+D +G+  V+TYDA+G++E   YS+ G+GS LI   LD+++   +      +   
Sbjct: 110 NLLVGIDMKGQAYVFTYDAIGNFESTAYSAHGTGSNLITSILDSKIGCNN-----QKQGT 164

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            P +  + V+L+K   +SA ERDIYTGD  EI +LN          LR D
Sbjct: 165 PPNTLEDYVNLLKDAISSAAERDIYTGDSAEIFILNPNVSQPILFPLRGD 214


>gi|322698009|gb|EFY89783.1| proteasome component C5 [Metarhizium acridum CQMa 102]
          Length = 263

 Score =  132 bits (332), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 72/174 (41%), Positives = 101/174 (58%), Gaps = 7/174 (4%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V++  GF AD  AL+  L     IY+++H K M+    A+ LS  LY KRFFPYY   +L
Sbjct: 90  VLSVCGFAADGTALRDQLDTICKIYRYRHGKPMTLNACAKRLSTILYQKRFFPYYVTAML 149

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA---- 132
           GGLD EGKG VY+YD VGSYER    + G+  +LIMPFLDNQ+   +  +  + +     
Sbjct: 150 GGLDEEGKGAVYSYDPVGSYEREQCRAGGAAGSLIMPFLDNQVNFKNQYVPGSGEGHDLQ 209

Query: 133 ---VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                PLS A+   ++K  F  A ER I  GD L+++++ K GI    + ++KD
Sbjct: 210 ERERHPLSRAQVETIIKDAFDGAVERHIEVGDALQMLIITKDGIEETILPMKKD 263


>gi|261201302|ref|XP_002627051.1| proteasome component C5 [Ajellomyces dermatitidis SLH14081]
 gi|239592110|gb|EEQ74691.1| proteasome component C5 [Ajellomyces dermatitidis SLH14081]
 gi|239611727|gb|EEQ88714.1| proteasome component C5 [Ajellomyces dermatitidis ER-3]
 gi|327348257|gb|EGE77114.1| proteasome component C5 [Ajellomyces dermatitidis ATCC 18188]
          Length = 266

 Score =  132 bits (332), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 75/184 (40%), Positives = 103/184 (55%), Gaps = 25/184 (13%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V++  GF AD +AL++ L A   +Y+++H K MS    AQ L+  LY KRFFPYY   +L
Sbjct: 91  VLSVVGFAADGRALKERLDAIVKMYKYRHGKPMSVKACAQRLATILYSKRFFPYYVHAIL 150

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL----------------- 119
            G+D EGKG +Y+YD VGSYER    + G+ ++LIMPFLDNQ+                 
Sbjct: 151 AGIDEEGKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNFKNQFIPGSGEGNAMD 210

Query: 120 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYME 179
           K P   + P +D         A+ LVK  F SA ER I  GD L+++V+   GI   +  
Sbjct: 211 KQPREPVPPPRDV--------ALQLVKDAFTSAVERHIEVGDGLQVMVITTEGIQEVHHP 262

Query: 180 LRKD 183
           L+KD
Sbjct: 263 LKKD 266


>gi|354547791|emb|CCE44526.1| hypothetical protein CPAR2_403290 [Candida parapsilosis]
          Length = 244

 Score =  132 bits (331), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 72/177 (40%), Positives = 102/177 (57%), Gaps = 7/177 (3%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQH-NKQMSCPGMAQLLSNTLYYKRFFPYY 71
            D  +M ++GF AD  AL          Y+  + N+++     A+ + + LY KRFFPYY
Sbjct: 69  GDNILMTANGFAADGVALLDKFKQAFTWYKFDNGNRKLEISSAARYIQHLLYGKRFFPYY 128

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
              ++ GLD EGKG VY+YD VGSYER    + G+ ++LIMPFLDNQ+   +   +P  D
Sbjct: 129 VSTLIAGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-FVPGTD 187

Query: 132 A-----VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                 +  LS  E + LV+  F SA ER IY GD LEI+++ K G+  EY  L++D
Sbjct: 188 GKEKKPLKYLSLEEVIQLVRDAFNSAGERHIYVGDGLEILIVTKDGVRTEYFPLKRD 244


>gi|353238864|emb|CCA70796.1| probable PRE7-20S proteasome subunit(beta6) [Piriformospora indica
           DSM 11827]
          Length = 250

 Score =  132 bits (331), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 69/157 (43%), Positives = 94/157 (59%), Gaps = 4/157 (2%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+A +GF AD     + +  R   YQH HNK+M    +A+L+   LY KRFFPYY +
Sbjct: 54  DKAVLAVNGFAADGNMFVQKVQQRLEWYQHAHNKEMPLRAIARLIQTMLYAKRFFPYYVY 113

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL--KSPSPLLLPAQD 131
           N+LGG++++G G VY++D VGSYER    + G+  +L+ PFLDNQ+  K+  P    A  
Sbjct: 114 NILGGIEDDGSGAVYSFDPVGSYEREACRAAGAAQSLVQPFLDNQIYFKNQLPPSGGAHP 173

Query: 132 AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVL 168
              PL   E + LV   F  ATER I  GD LEI ++
Sbjct: 174 KHLPLK--EVLSLVIDSFTGATERHIEVGDGLEIYIV 208


>gi|312066298|ref|XP_003136204.1| proteasome subunit beta type 1 [Loa loa]
 gi|307768639|gb|EFO27873.1| proteasome subunit beta type 1 [Loa loa]
          Length = 258

 Score =  132 bits (331), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 69/172 (40%), Positives = 103/172 (59%), Gaps = 6/172 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D  V++ +GF  DV  L++LL AR   Y+  +   M+    A+LLS  LYY+RFFPYY+ 
Sbjct: 91  DSIVLSCAGFYGDVLQLKRLLEARLHKYRFDYRGDMTVDLCAELLSRNLYYRRFFPYYTG 150

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            +L G+D  GKG V++YD +G  E +GY++ GS   +IMPF D Q+     L+  + D  
Sbjct: 151 AILAGIDENGKGAVFSYDPIGCIEHIGYTASGSAEPMIMPFFDCQIG----LVTVSGDVE 206

Query: 134 TP-LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG-IHREYMELRKD 183
            P L+   A  L+K  F  A ER+I TGDK+ +V++  G  I + ++ LR+D
Sbjct: 207 KPHLTIERATSLIKDAFRVAAEREISTGDKIHLVIVEAGKPIRKMHLPLRED 258


>gi|336369489|gb|EGN97830.1| hypothetical protein SERLA73DRAFT_182590 [Serpula lacrymans var.
           lacrymans S7.3]
 gi|336382272|gb|EGO23422.1| hypothetical protein SERLADRAFT_469320 [Serpula lacrymans var.
           lacrymans S7.9]
          Length = 253

 Score =  132 bits (331), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 70/161 (43%), Positives = 98/161 (60%), Gaps = 5/161 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+ V+A +GF AD     K +  R   Y+H H+K M    +A+L+   LY +RFFPYY +
Sbjct: 61  DRAVLAVNGFAADGNMFVKKVKQRLEWYRHAHSKDMPLRAIARLIQTMLYARRFFPYYVY 120

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL--KSPSPLLLPAQD 131
           N+LGG++ +G G VY++D VGSYER    + G+  +L+ PFLDNQ+  K+ +P L  +  
Sbjct: 121 NILGGIEEDGTGAVYSFDPVGSYEREACRAAGAAQSLVQPFLDNQIYFKNQTPALGTSHP 180

Query: 132 AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEI-VVLNKG 171
           A  PL     + +V   F SATER I  GD LE+ VVL KG
Sbjct: 181 AHLPLP--TVLSIVIDSFTSATERHIEVGDGLEMYVVLAKG 219


>gi|225680770|gb|EEH19054.1| proteasome subunit beta type-1-A [Paracoccidioides brasiliensis
           Pb03]
 gi|226292463|gb|EEH47883.1| proteasome component C5 [Paracoccidioides brasiliensis Pb18]
          Length = 266

 Score =  131 bits (330), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 76/176 (43%), Positives = 104/176 (59%), Gaps = 9/176 (5%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V++  GF AD +AL++ L A   +Y+++H K MS    AQ LS  LY KRFFPYY   +L
Sbjct: 91  VLSVVGFAADGRALKERLDAVVKMYKYKHGKPMSVKACAQRLSTILYSKRFFPYYVHAIL 150

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLL--------LP 128
           GG+D +G+G +Y+YD VGSYER    + G+ ++LIMPFLDNQ+   +  +        L 
Sbjct: 151 GGIDEDGRGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNFKNQYVSGPGEGNALD 210

Query: 129 AQDAVTPLSEAE-AVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            Q        AE A+ LV   F SA ER I  GD L+I+++ K GI   Y  L+KD
Sbjct: 211 KQPRQPQPQPAEDALQLVNDAFTSAVERHIEVGDGLQIMLITKDGIMEMYHPLKKD 266


>gi|389626457|ref|XP_003710882.1| proteasome component C5 [Magnaporthe oryzae 70-15]
 gi|351650411|gb|EHA58270.1| proteasome component C5 [Magnaporthe oryzae 70-15]
 gi|440470291|gb|ELQ39366.1| proteasome component C5 [Magnaporthe oryzae Y34]
 gi|440486750|gb|ELQ66588.1| proteasome component C5 [Magnaporthe oryzae P131]
          Length = 265

 Score =  131 bits (330), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/174 (41%), Positives = 101/174 (58%), Gaps = 7/174 (4%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V++  GF AD +AL++ L A   IY+++H K M+    A+ LS  LY KRFFPYY+  +L
Sbjct: 92  VLSVVGFAADGEALKERLDAICKIYRYRHGKPMTVKACAKRLSTILYQKRFFPYYTHAIL 151

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA------- 129
            G+D EG G VY+YD VGSYER    + G+ ++LIMPFLDNQ+   +  +  +       
Sbjct: 152 AGIDEEGHGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYVPGSGTGHDLQ 211

Query: 130 QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           +    PL       LVK  F  A ER I  GD L+++++ K GI    M L+KD
Sbjct: 212 ERERKPLPRETVETLVKDAFDGAVERHIEVGDGLQMMIITKDGIEEVIMPLKKD 265


>gi|448530387|ref|XP_003870050.1| Pre7 protein [Candida orthopsilosis Co 90-125]
 gi|380354404|emb|CCG23919.1| Pre7 protein [Candida orthopsilosis]
          Length = 286

 Score =  131 bits (330), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/177 (40%), Positives = 102/177 (57%), Gaps = 7/177 (3%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQH-NKQMSCPGMAQLLSNTLYYKRFFPYY 71
            D  +M ++GF AD  AL          Y+  + N+++     A+ + + LY KRFFPYY
Sbjct: 111 GDNILMTANGFAADGVALIDKFKQSFTWYKFDNGNRKLEISSAARYIQHLLYGKRFFPYY 170

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
              ++ GLD EGKG VY+YD VGSYER    + G+ ++LIMPFLDNQ+   +   +P  D
Sbjct: 171 VSTLIAGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-FVPGTD 229

Query: 132 A-----VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                 +  LS  E + LV+  F SA ER IY GD LEI+++ K G+  EY  L++D
Sbjct: 230 GKEKKPLKYLSLEEVIQLVRDAFNSAGERHIYVGDGLEILIVTKDGVRTEYYPLKRD 286


>gi|225714644|gb|ACO13168.1| Proteasome subunit beta type-1 precursor [Lepeophtheirus salmonis]
          Length = 238

 Score =  131 bits (329), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 70/167 (41%), Positives = 100/167 (59%), Gaps = 4/167 (2%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V+ +SG   DV    ++  +R   Y + H K+MS   +AQ+LS TLY KRFFPYY  NVL
Sbjct: 76  VLGASGCWCDVLTFVRVAESRIKNYNYTHGKEMSTSALAQMLSITLYRKRFFPYYIHNVL 135

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPL 136
            GLD+EG+G ++TYD VG  E+V  S  G+   +I P LDN ++  +  +  A+  +  L
Sbjct: 136 AGLDDEGRGAIFTYDPVGHCEKVKISCGGASMEMIQPILDNVIEKKN--MTNAE--LVDL 191

Query: 137 SEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           S  E V++V  CF SA ER I TGD +   ++ K GI  + + LR+D
Sbjct: 192 SIDETVNIVHDCFISAAERQIQTGDGVVFKIITKDGIETKRVGLRRD 238


>gi|346320799|gb|EGX90399.1| proteasome component C5 [Cordyceps militaris CM01]
          Length = 262

 Score =  131 bits (329), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 71/174 (40%), Positives = 102/174 (58%), Gaps = 7/174 (4%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V++  GF AD  AL+  L     IY+++H K M+    A+ LS  LY KRFFPYY+  +L
Sbjct: 89  VLSVCGFAADGDALRDRLDTICKIYRYRHGKPMTLNACAKRLSTILYQKRFFPYYTHALL 148

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA------- 129
           GGLD EG G VY+YD VGSYER    + G+ ++LIMPFLDNQ+   +  +  +       
Sbjct: 149 GGLDEEGVGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFRNQYVPGSGIGHNLK 208

Query: 130 QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           +    PLS  +   ++K  F  A ER I  GD L+++++ K GI   ++ L+KD
Sbjct: 209 ERPHAPLSRVQVETIIKDAFDGAAERHIEVGDSLQMLIVTKNGIEEVFVPLKKD 262


>gi|290562593|gb|ADD38692.1| Proteasome subunit beta type-1 [Lepeophtheirus salmonis]
          Length = 238

 Score =  131 bits (329), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 70/167 (41%), Positives = 100/167 (59%), Gaps = 4/167 (2%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V+ +SG   DV    ++  +R   Y + H K+MS   +AQ+LS TLY KRFFPYY  NVL
Sbjct: 76  VLGASGCWCDVLTFIRVAESRIKNYNYTHGKEMSTSALAQMLSITLYRKRFFPYYIHNVL 135

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPL 136
            GLD+EG+G ++TYD VG  E+V  S  G+   +I P LDN ++  +  +  A+  +  L
Sbjct: 136 AGLDDEGRGAIFTYDPVGHCEKVKISCGGASMEMIQPILDNVIEKKN--MTNAE--LVDL 191

Query: 137 SEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           S  E V++V  CF SA ER I TGD +   ++ K GI  + + LR+D
Sbjct: 192 SIDETVNIVHDCFISAAERQIQTGDGVVFKIITKDGIETKRVGLRRD 238


>gi|449548524|gb|EMD39490.1| hypothetical protein CERSUDRAFT_80861 [Ceriporiopsis subvermispora
           B]
          Length = 252

 Score =  131 bits (329), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 68/159 (42%), Positives = 94/159 (59%), Gaps = 1/159 (0%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+ V+A +GF AD     K +  R   Y+H H K M    +A+L+   LY +RFFPYY +
Sbjct: 60  DRAVLAVNGFAADGNMFVKKVKQRLEWYRHAHAKDMPLRAIARLIQTMLYAQRFFPYYVY 119

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N+LGG++ +G G VY++D VGSYER    + G+  +L+ PFLDNQ+   +    P Q   
Sbjct: 120 NILGGIEEDGSGAVYSFDPVGSYEREACRAAGAAQSLVQPFLDNQIYFKNQAAAPNQPHP 179

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEI-VVLNKG 171
             L  ++ + +V   F SATER I  GD LEI VVL KG
Sbjct: 180 AHLPLSDVLAIVIDSFTSATERHIEVGDGLEIYVVLAKG 218


>gi|344305208|gb|EGW35440.1| proteasome component C5 [Spathaspora passalidarum NRRL Y-27907]
          Length = 242

 Score =  130 bits (328), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/177 (40%), Positives = 103/177 (58%), Gaps = 7/177 (3%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQH-NKQMSCPGMAQLLSNTLYYKRFFPYY 71
            D  VM ++GF AD  AL      +   Y+  +   ++     A+ + + LY KRFFPYY
Sbjct: 67  GDNIVMTANGFAADGVALIDKFRQQLKWYKFDNFGGKLEIKSAARYIQHLLYGKRFFPYY 126

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
              ++ GLD EGKG VY+YD VGSYER    + G+ ++LIMPFLDNQ+   +   +P  D
Sbjct: 127 VSTLIAGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-FIPGTD 185

Query: 132 A-----VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                 +  L+  E ++LV+  F+SATER IY GD LEI ++ K G+  EY  L++D
Sbjct: 186 GKEKKPLKYLTLEEVIELVRDAFSSATERHIYVGDGLEIKIVTKDGVRTEYYPLKRD 242


>gi|324507472|gb|ADY43167.1| Proteasome subunit beta type-1 [Ascaris suum]
          Length = 253

 Score =  130 bits (328), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 67/171 (39%), Positives = 104/171 (60%), Gaps = 4/171 (2%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           +  ++A SGF  DV  L++LL AR   Y+  +   M+    A+LL+  LYY+RFFPYY+ 
Sbjct: 86  NSIILACSGFYGDVLQLKRLLEARLHKYRFDYRGDMTVDLCAELLARNLYYRRFFPYYTG 145

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           ++L G+D +GKG V++YD +G  ER+ Y++ GS   +IMPFLD Q+     + L      
Sbjct: 146 SILAGIDEDGKGAVFSYDPIGCIERLQYTASGSAEPMIMPFLDCQVGH---VTLTGDVEK 202

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG-IHREYMELRKD 183
            PL+   A  L+K  F  + ER+I TGDK+ +V+  +G  I + ++ LR+D
Sbjct: 203 PPLTIERATSLMKDAFRVSAEREICTGDKIHLVIAERGKPIRQMHLPLRED 253


>gi|409040369|gb|EKM49857.1| hypothetical protein PHACADRAFT_265596 [Phanerochaete carnosa
           HHB-10118-sp]
          Length = 252

 Score =  130 bits (328), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/168 (41%), Positives = 96/168 (57%), Gaps = 19/168 (11%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+ V+A +GF AD     K +  R   Y+H H K M    +A+L+   LY +RFFPYY +
Sbjct: 60  DRAVLAVNGFAADGNMFVKKVKQRLEWYRHAHAKDMPLRAIARLIQTMLYGQRFFPYYVY 119

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL---------KSPSP 124
           N+LGG++ +G G +Y++D VGSYER    + G+   L+ PFLDNQ+          SP P
Sbjct: 120 NILGGIEEDGTGAIYSFDPVGSYERETCRAAGAAMALVQPFLDNQIYFKNQQAPADSPHP 179

Query: 125 LLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEI-VVLNKG 171
           + LP QD ++         +V   F SATER I  GD LEI V+L KG
Sbjct: 180 VHLPLQDVLS---------IVIDSFTSATERHIEVGDGLEIYVILAKG 218


>gi|392572662|gb|EIW65807.1| hypothetical protein TREMEDRAFT_46043 [Tremella mesenterica DSM
           1558]
          Length = 270

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/163 (43%), Positives = 96/163 (58%), Gaps = 7/163 (4%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D  V+A++GF AD K   + L      YQH H+KQM    +A+L+   LY +RFFPYY +
Sbjct: 69  DNAVLATNGFAADGKNFVRRLKQSLEWYQHNHHKQMGLKAIARLIQTMLYGRRFFPYYVY 128

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL----KSPSPLLLPA 129
           N+LGG++ +G G VY++D VGSYER    + G+   L+ PFLDNQ+    + P P   P 
Sbjct: 129 NILGGIEEDGSGAVYSFDPVGSYEREACRAAGAAQALVQPFLDNQIYFKNQQPEPGAEPF 188

Query: 130 QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEI-VVLNKG 171
                PLS    + LV   F SATER I  GD +EI +V+ KG
Sbjct: 189 VPGRLPLS--TVLGLVVDSFTSATERHIEVGDGIEIFIVMAKG 229


>gi|37778970|gb|AAP20145.1| 20S proteasome beta 6 subunit [Pagrus major]
          Length = 135

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 64/132 (48%), Positives = 87/132 (65%), Gaps = 8/132 (6%)

Query: 54  MAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMP 113
           +A +LS  LY +RFFPYY +N++GGLD EGKG VY++D VGSY+R  Y + GS S ++ P
Sbjct: 10  IAAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDTYKAGGSASAMLQP 69

Query: 114 FLDNQLKSPSPLLLPAQDAV--TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKG 171
            LDNQ+           + V   PL++ +AV LVK  F SA ERD+YTGD L + V+ K 
Sbjct: 70  LLDNQIG------FKNMEGVQHVPLTQDKAVQLVKDVFISAAERDVYTGDALRVCVITKE 123

Query: 172 GIHREYMELRKD 183
           GI+ + + LRKD
Sbjct: 124 GINEQTIPLRKD 135


>gi|195398909|ref|XP_002058063.1| GJ15696 [Drosophila virilis]
 gi|194150487|gb|EDW66171.1| GJ15696 [Drosophila virilis]
          Length = 256

 Score =  130 bits (326), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/167 (38%), Positives = 98/167 (58%), Gaps = 1/167 (0%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           ++AS+G   D  ++  LL  R  +Y+ +HNK +S   +AQ++S  +Y +RFFPY++  +L
Sbjct: 91  MVASTGLWCDTISMTSLLQIRIQMYEQEHNKPISTDALAQMISIVMYNRRFFPYHTCTIL 150

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPL 136
            G+D  GKG VY YD VG  ER  Y   GS   +++P LD+ L      L+P  D   PL
Sbjct: 151 AGIDQAGKGAVYYYDPVGHMERCRYRVLGSSGKMLLPALDHGLGWEHHTLVPP-DQYPPL 209

Query: 137 SEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            +  A+ L + C   A++RD++TGD   + ++ K GI  E + LRKD
Sbjct: 210 DKERALALARNCLRVASDRDLFTGDTGVLKLITKDGIETETLPLRKD 256


>gi|241954356|ref|XP_002419899.1| proteasome component, putative [Candida dubliniensis CD36]
 gi|223643240|emb|CAX42114.1| proteasome component, putative [Candida dubliniensis CD36]
          Length = 245

 Score =  130 bits (326), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 72/177 (40%), Positives = 101/177 (57%), Gaps = 7/177 (3%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPGMAQLLSNTLYYKRFFPYY 71
            D  +M ++GF AD  AL        + Y+  +N K+++    A+ +   LY KR FPYY
Sbjct: 70  GDDILMTANGFAADGIALIDRFKQSLIWYKFDNNGKKLAIKSAARYIQQLLYGKRLFPYY 129

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
              ++ GLD EGKG VY+YD VGSYER    + G+ ++LIMPFLDNQ+   +   +P  D
Sbjct: 130 VSTLIAGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-FVPGTD 188

Query: 132 A-----VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                 +  L+  E + LV+  F SA ER IY GD LEI ++ K GI  EY  L++D
Sbjct: 189 GKEKKPLKYLTLEEVIQLVRDAFTSAGERHIYVGDGLEIKIVTKDGIRTEYYPLKRD 245


>gi|195398923|ref|XP_002058070.1| GJ15881 [Drosophila virilis]
 gi|194150494|gb|EDW66178.1| GJ15881 [Drosophila virilis]
          Length = 262

 Score =  130 bits (326), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/167 (38%), Positives = 98/167 (58%), Gaps = 1/167 (0%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           ++AS+G   D  ++  LL  R  +Y+ +HNK +S   +AQ++S  +Y +RFFPY++  +L
Sbjct: 97  MVASTGLWCDTISMTSLLQIRIQMYEQEHNKPISTDALAQMISIVMYNRRFFPYHTCTIL 156

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPL 136
            G+D  GKG VY YD VG  ER  Y   GS   +++P LD+ L      L+P  D   PL
Sbjct: 157 AGIDQAGKGAVYYYDPVGHMERCRYRVLGSSGKMLLPALDHGLGWEHHTLVPP-DQYPPL 215

Query: 137 SEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            +  A+ L + C   A++RD++TGD   + ++ K GI  E + LRKD
Sbjct: 216 DKERALALARNCLRVASDRDLFTGDTGVLKLITKDGIETETLPLRKD 262


>gi|255720859|ref|XP_002545364.1| proteasome component C5 [Candida tropicalis MYA-3404]
 gi|240135853|gb|EER35406.1| proteasome component C5 [Candida tropicalis MYA-3404]
          Length = 245

 Score =  129 bits (325), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 72/177 (40%), Positives = 102/177 (57%), Gaps = 7/177 (3%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPGMAQLLSNTLYYKRFFPYY 71
            D  +M ++GF AD  AL        + Y+  +  K+++    A+ + + LY KRFFP+Y
Sbjct: 70  GDDILMTANGFAADGVALIDRFKQSLIWYKFDNGGKKLTIKSAARYIQHLLYGKRFFPFY 129

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
              ++ GLD EGKG VY+YD VGSYER    + G+ ++LIMPFLDNQ+   +   +P  D
Sbjct: 130 VSTLIAGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-FVPGTD 188

Query: 132 A-----VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                 +  LS  E + LV+  F SA ER IY GD LEI ++ K GI  EY  L++D
Sbjct: 189 GKEKKPLKYLSLEEVIQLVRDAFTSAGERHIYVGDGLEIKIVTKDGIRTEYYPLKRD 245


>gi|268570354|ref|XP_002648488.1| C. briggsae CBR-PBS-6 protein [Caenorhabditis briggsae]
          Length = 258

 Score =  129 bits (325), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 67/171 (39%), Positives = 103/171 (60%), Gaps = 4/171 (2%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D  ++ +SGF  DV  L+K+L +R   Y+  +   MS    A+LLS  LYY+RFFPYY+ 
Sbjct: 91  DSIILTTSGFYGDVIQLKKVLQSRLHKYRFDYRSDMSVDLCAELLSRNLYYRRFFPYYTG 150

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            +L G+D  GKG V++YD +G  ER+GYS+ G+   +I+PFLD Q+     + L      
Sbjct: 151 AILAGIDEHGKGAVFSYDPIGCIERLGYSASGAAEPMIIPFLDCQI---GHVTLAEGYER 207

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG-IHREYMELRKD 183
             L+   A+ L+K  F  A ER+I TGDK+ +V+   G  + ++++ LR+D
Sbjct: 208 PQLTLERAISLMKDSFRGAAEREISTGDKIHLVIAEAGKPVVQKFLPLRED 258


>gi|255965748|gb|ACU45169.1| proteasome subunit beta type 1 [Prorocentrum minimum]
          Length = 123

 Score =  129 bits (324), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 66/129 (51%), Positives = 88/129 (68%), Gaps = 7/129 (5%)

Query: 56  QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 115
           QLLS  LY KRFFPYY+FNVL G+D+EGKG VY YDA+GS+ERV Y++ GSGS+L+M  L
Sbjct: 1   QLLSTMLYGKRFFPYYTFNVLVGIDDEGKGAVYHYDAIGSFERVPYTTSGSGSSLVMSVL 60

Query: 116 DNQLKSPSPLLLPAQDAVTP-LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIH 174
           D Q++  +      Q   TP L++ + VDL     +S  ERDI+TGD  EI V++  G+H
Sbjct: 61  DAQIQKGN------QTIETPVLTKDKIVDLSMDVLSSVGERDIHTGDAGEIFVIDAAGVH 114

Query: 175 REYMELRKD 183
           +   EL+ D
Sbjct: 115 KTKFELKLD 123


>gi|253747271|gb|EET02070.1| Proteasome subunit beta type 1 [Giardia intestinalis ATCC 50581]
          Length = 220

 Score =  129 bits (324), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 66/170 (38%), Positives = 99/170 (58%), Gaps = 9/170 (5%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V A+SG  ADV+ L K +      Y  +  ++M+     +LLS  +YY+R FP+Y+ 
Sbjct: 60  DKIVYAASGMHADVQRLIKHMKIESTDYHLKTQREMAIEQFTRLLSAMMYYRRSFPWYTS 119

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           +++ G+D+EGKG VY+YD +GS  R  Y S G+G+ +I P LD         +LP  DA 
Sbjct: 120 SIVAGIDSEGKGAVYSYDVIGSTLRTRYGSAGTGNAMICPILDEA-------ILPKSDA- 171

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             ++   A +L+++ F S  ERDIYTGD +  + ++  GI     ELRKD
Sbjct: 172 -EITREFAFELIQSAFKSCAERDIYTGDSVVAMCISADGIQERTFELRKD 220


>gi|170578154|ref|XP_001894290.1| proteasome subunit beta type 1 [Brugia malayi]
 gi|158599186|gb|EDP36871.1| proteasome subunit beta type 1, putative [Brugia malayi]
          Length = 258

 Score =  129 bits (324), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 68/172 (39%), Positives = 101/172 (58%), Gaps = 6/172 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D  V++ +GF  D+  L++LL AR   Y+  +   M+    A+LLS  LYY+RFFPYY+ 
Sbjct: 91  DSIVLSCAGFYGDILQLKRLLEARLHKYRFDYRGDMTVDLCAELLSRNLYYRRFFPYYTG 150

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            +L G+D  GKG V++YD +G  E + Y++ GS   +IMPF D Q+     L+  + D  
Sbjct: 151 AILAGIDENGKGAVFSYDPIGCIEHIAYTASGSAEPMIMPFFDCQIG----LVTMSGDVE 206

Query: 134 TPLSEAE-AVDLVKTCFASATERDIYTGDKLEIVVLNKGG-IHREYMELRKD 183
            PL   E A  L+K  F  A ER+I TGDK+ +V+   G  I + ++ LR+D
Sbjct: 207 KPLLTIERATSLIKDAFRVAAEREISTGDKIHLVIAEAGKPIRKMHLPLRED 258


>gi|403412828|emb|CCL99528.1| predicted protein [Fibroporia radiculosa]
          Length = 252

 Score =  129 bits (323), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 68/161 (42%), Positives = 98/161 (60%), Gaps = 5/161 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           ++ V+A +GF AD     K +  R   Y+H H K+M    +A+L+   LY +RFFPYY +
Sbjct: 60  ERAVLAVNGFAADGNMFVKKVKQRLEWYRHAHAKEMPLRAIARLIQTMLYAQRFFPYYVY 119

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL--KSPSPLLLPAQD 131
           N+LGG++ +G G VY++D VGSYER    + G+  +L+ PFLDNQ+  K+ +P    +  
Sbjct: 120 NILGGIEEDGSGAVYSFDPVGSYEREACRAAGAAQSLVQPFLDNQIYFKNQTPAAGSSHP 179

Query: 132 AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEI-VVLNKG 171
              PL+  + + +V   F SATER I  GD LEI VVL KG
Sbjct: 180 THLPLN--DVLSIVIDSFTSATERHIEVGDGLEIYVVLAKG 218


>gi|393212888|gb|EJC98386.1| 20S proteasome subunit [Fomitiporia mediterranea MF3/22]
          Length = 266

 Score =  129 bits (323), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 71/161 (44%), Positives = 93/161 (57%), Gaps = 3/161 (1%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+A +GF AD     K +  R   Y+H H K M    +A+L+   LY +RFFPYY +
Sbjct: 70  DKAVLAVNGFAADGNMFIKKVKQRLEWYRHAHAKDMPLRAVARLIQTMLYAQRFFPYYVY 129

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL--KSPSPLLLPAQD 131
           N+LGG++ +G G VY++D VGSYER    + G+   L+ PFLDNQ+  K+  P L     
Sbjct: 130 NILGGIEEDGSGAVYSFDPVGSYEREACRAAGAAQQLVQPFLDNQIYFKNQQPPLGTVGG 189

Query: 132 AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEI-VVLNKG 171
             T L     + LV   F SATER I  GD LE+ VVL KG
Sbjct: 190 HPTHLPLERVLSLVVDSFTSATERHIEVGDGLEMYVVLAKG 230


>gi|336272341|ref|XP_003350927.1| hypothetical protein SMAC_04232 [Sordaria macrospora k-hell]
 gi|380090694|emb|CCC04864.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 151

 Score =  129 bits (323), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 69/151 (45%), Positives = 92/151 (60%), Gaps = 7/151 (4%)

Query: 40  IYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERV 99
           +Y+++H K MS    AQ LS  LY KRFFPYY + +LGGLD EGKG VY+YD VGSYER 
Sbjct: 1   MYRYRHGKPMSVKACAQRLSTILYQKRFFPYYVYAILGGLDEEGKGAVYSYDPVGSYERE 60

Query: 100 GYSSQGSGSTLIMPFLDNQLK-----SPSPLLLPA--QDAVTPLSEAEAVDLVKTCFASA 152
              + G+ ++LIMPFLDNQ+       P   +  A  +    PL+ +E   LVK  F  A
Sbjct: 61  QCRAGGAAASLIMPFLDNQVNFKNQYEPGSGVGHALQERERKPLTRSEGEILVKDAFDGA 120

Query: 153 TERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            ER I  GD L+++V+ + GI    + L+KD
Sbjct: 121 VERHIEVGDGLQMMVITRDGIEEVLLPLKKD 151


>gi|389745045|gb|EIM86227.1| proteasome subunit [Stereum hirsutum FP-91666 SS1]
          Length = 258

 Score =  128 bits (322), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 68/161 (42%), Positives = 97/161 (60%), Gaps = 5/161 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+ V+A +GF AD     K +  R   Y+H H K M    +A+L+   LY +RFFPYY +
Sbjct: 66  DRAVLAVNGFAADGNMFVKQVKQRLEWYRHAHAKDMPLRAIARLIQTMLYGRRFFPYYVY 125

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL--KSPSPLLLPAQD 131
           N+LGG++ +G G VY++D VGSYER    + G+  +L+ PFLDNQ+  K+ +P    +  
Sbjct: 126 NILGGIEEDGTGAVYSFDPVGSYEREACRAAGAAQSLVQPFLDNQIYFKNQTPAQGLSHP 185

Query: 132 AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEI-VVLNKG 171
              PL   + +D+V   F SATER I  GD LE+ +VL KG
Sbjct: 186 THLPLP--DVLDIVIDSFTSATERHIEVGDGLEMFIVLAKG 224


>gi|402585903|gb|EJW79842.1| proteasome subunit beta type [Wuchereria bancrofti]
          Length = 258

 Score =  128 bits (322), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 67/172 (38%), Positives = 101/172 (58%), Gaps = 6/172 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D  V++ +GF  D+  L++LL AR   Y+  +   M+    A+LLS  LYY+RFFPYY+ 
Sbjct: 91  DSIVLSCAGFYGDILQLKRLLEARLHKYRFDYRGDMTVDLCAELLSRNLYYRRFFPYYTG 150

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            +L G+D  GKG V++YD +G  E + Y++ GS   +IMPF D Q+     L+  + D  
Sbjct: 151 AILAGIDENGKGAVFSYDPIGCIEHIAYTASGSAEPMIMPFFDCQIG----LVTMSGDVE 206

Query: 134 TP-LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG-IHREYMELRKD 183
            P L+   A  L+K  F  A ER+I TGDK+ +V+   G  I + ++ LR+D
Sbjct: 207 KPHLTVERATSLIKDAFRVAAEREISTGDKIHLVIAEAGKPIRKMHLPLRED 258


>gi|238881595|gb|EEQ45233.1| proteasome component C5 [Candida albicans WO-1]
          Length = 244

 Score =  128 bits (321), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/177 (41%), Positives = 102/177 (57%), Gaps = 8/177 (4%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPGMAQLLSNTLYYKRFFPYY 71
            D  +M ++GF AD  AL        + Y+  +N K+++    A+ +   LY KRFFPY 
Sbjct: 70  GDDILMTANGFAADGVALIDRFKQSLIWYKFDNNGKKLAIKSAARYIQQLLYGKRFFPYV 129

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
           S  ++ GLD EGKG VY+YD VGSYER    + G+ ++LIMPFLDNQ+   +   +P  D
Sbjct: 130 S-TLIAGLDEEGKGAVYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNFKNQ-FVPGTD 187

Query: 132 A-----VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                 +  L+  E + LV+  F SA ER IY GD LEI ++ K GI  EY  L++D
Sbjct: 188 GKEKKPLKFLTLEEVIQLVRDAFTSAGERHIYVGDGLEIKIVTKDGIRTEYYPLKRD 244


>gi|392559294|gb|EIW52479.1| proteasome subunit [Trametes versicolor FP-101664 SS1]
          Length = 252

 Score =  128 bits (321), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 67/159 (42%), Positives = 93/159 (58%), Gaps = 1/159 (0%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+ V+A +GF AD     K +  R   Y+H H K M    +A+L+   LY +RFFPYY +
Sbjct: 60  DRAVLAVNGFAADGNMFVKKVKQRLEWYRHAHAKDMPLRAIARLIQTMLYAQRFFPYYVY 119

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N+LGG++ +G G VY++D VGSYER    + G+  +L+ PFLDNQ+   +      Q   
Sbjct: 120 NILGGIEEDGSGAVYSFDPVGSYEREACRAAGAAQSLVQPFLDNQIYFKNQTAAVGQSHP 179

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEI-VVLNKG 171
           T L   + + +V   F SATER I  GD LEI VV+ KG
Sbjct: 180 THLPLPDVLAIVIDSFTSATERHIEVGDGLEIYVVVAKG 218


>gi|17554384|ref|NP_498806.1| Protein PBS-6 [Caenorhabditis elegans]
 gi|21903455|sp|P34286.2|PSB1_CAEEL RecName: Full=Proteasome subunit beta type-1; AltName:
           Full=Proteasome subunit beta 6
 gi|12276021|gb|AAG50223.1|AF303265_1 proteasome component C5 [Caenorhabditis elegans]
 gi|351020646|emb|CCD62635.1| Protein PBS-6 [Caenorhabditis elegans]
          Length = 258

 Score =  128 bits (321), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 67/171 (39%), Positives = 102/171 (59%), Gaps = 4/171 (2%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D  ++ +SGF  DV  L+K+L +R   Y+  +   MS    A+LLS  LYY+RFFPYY+ 
Sbjct: 91  DNIILTTSGFYGDVLQLKKVLQSRLHKYRFDYRSDMSVDLCAELLSRNLYYRRFFPYYTG 150

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            +L G+D  GKG V++YD +G  ER+GYS+ G+   +I+PFLD Q+     + L      
Sbjct: 151 AILAGIDEHGKGAVFSYDPIGCIERLGYSASGAAEPMIIPFLDCQI---GHVTLSEGYER 207

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG-IHREYMELRKD 183
             L+   A+ L+K  F  A ER+I TGDK+ +V+   G  +  +++ LR+D
Sbjct: 208 PELTLDRAISLMKDSFRGAAEREISTGDKIHLVIAEAGKPVVVKFLPLRED 258


>gi|320586233|gb|EFW98912.1| proteasome component [Grosmannia clavigera kw1407]
          Length = 265

 Score =  128 bits (321), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/176 (39%), Positives = 103/176 (58%), Gaps = 7/176 (3%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           + V++  GF AD +AL++ L     +Y+++H K +S    A+ LS  LY KRFFPYY+  
Sbjct: 90  RIVLSVVGFAADGEALKERLDTICKMYRYRHGKPISVNACAKRLSTILYQKRFFPYYTHA 149

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA----- 129
           +LGGLD +G G +Y+YD VGSYER    + G+ ++LI PFLDNQ+   +  +  +     
Sbjct: 150 ILGGLDEDGIGAIYSYDPVGSYEREQSRAGGAAASLITPFLDNQVNFKNQYVPGSGIGHD 209

Query: 130 --QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             +    PL   +  +LVK  F  A ER I  GD L+++V+ K GI    + L+KD
Sbjct: 210 LMERPRVPLPRNDVEELVKDAFDGAVERHIEVGDYLQMLVVTKDGIEEVVLPLKKD 265


>gi|340054849|emb|CCC49156.1| putative 20S proteasome beta 6 subunit [Trypanosoma vivax Y486]
 gi|340054851|emb|CCC49158.1| putative 20S proteasome beta 6 subunit [Trypanosoma vivax Y486]
          Length = 258

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/172 (40%), Positives = 100/172 (58%), Gaps = 5/172 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQM-SCPGMAQLLSNTLYYKRFFPYY 71
            D   +AS+G QAD   LQ++L  R   YQ+ +  ++ S   +A+L S  LY +RFFPYY
Sbjct: 91  TDHVFLASTGMQADRLQLQQMLKYRIQWYQYNNGGEVPSTRAIAKLTSTILYQRRFFPYY 150

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
           +FN++ GLD +G G  Y+YD VGS E   Y + GS S+ I P +D  L     +    Q 
Sbjct: 151 TFNMIVGLDEKGAGVCYSYDPVGSTEPFRYGTSGSASSFIEPLMDCLLTRQHMV----QQ 206

Query: 132 AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           A   L   EA++++K+ F  A ERDI+TGD +   ++   G+  E+ ELRKD
Sbjct: 207 APAELGMNEALEMLKSAFTGAAERDIFTGDSVCFHIITTEGVRTEFFELRKD 258


>gi|409078890|gb|EKM79252.1| hypothetical protein AGABI1DRAFT_113835 [Agaricus bisporus var.
           burnettii JB137-S8]
          Length = 256

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 67/158 (42%), Positives = 92/158 (58%), Gaps = 1/158 (0%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+A +GF AD     K +  R   Y+H H K M    +A+L+   LY +RFFPYY +
Sbjct: 63  DKAVLAVNGFAADGNMFVKKVRQRLEWYRHAHAKDMPIRAIARLIQTMLYSRRFFPYYVY 122

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N+LGG++ +G G VY++D VGSYER    + G+  +L+ PFLDNQ+   +    P     
Sbjct: 123 NILGGIEEDGTGAVYSFDPVGSYEREACRAAGAAQSLVQPFLDNQIYFKNQTPAPGTSFP 182

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEI-VVLNK 170
             LS +  + LV   F SATER I  GD LE+ +VL K
Sbjct: 183 GHLSLSTVLSLVIDSFTSATERHIEVGDGLEMYIVLAK 220


>gi|426195798|gb|EKV45727.1| 20S proteasome subunit [Agaricus bisporus var. bisporus H97]
          Length = 256

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 67/158 (42%), Positives = 92/158 (58%), Gaps = 1/158 (0%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+A +GF AD     K +  R   Y+H H K M    +A+L+   LY +RFFPYY +
Sbjct: 63  DKAVLAVNGFAADGNMFVKKVRQRLEWYRHAHAKDMPIRAIARLIQTMLYSRRFFPYYVY 122

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N+LGG++ +G G VY++D VGSYER    + G+  +L+ PFLDNQ+   +    P     
Sbjct: 123 NILGGIEEDGTGAVYSFDPVGSYEREACRAAGAAQSLVQPFLDNQIYFKNQTPAPGTSFP 182

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEI-VVLNK 170
             LS +  + LV   F SATER I  GD LE+ +VL K
Sbjct: 183 GHLSLSTVLSLVIDSFTSATERHIEVGDGLEMYIVLAK 220


>gi|341897234|gb|EGT53169.1| CBN-PBS-6 protein [Caenorhabditis brenneri]
          Length = 258

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 66/171 (38%), Positives = 102/171 (59%), Gaps = 4/171 (2%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D  V+ +SGF  DV  L+K+L +R   Y+  +   MS    A+LL+  LYY+RFFPYY+ 
Sbjct: 91  DSIVLTTSGFYGDVIQLKKVLQSRLHKYRFDYRADMSVDLCAELLARNLYYRRFFPYYTG 150

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            +L G+D  GKG V++YD +G  ER+ YS+ G+   +I+PFLD Q+     + L      
Sbjct: 151 AILAGIDENGKGAVFSYDPIGCIERIAYSASGAAEPMIIPFLDCQI---GHVTLSEGYER 207

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG-IHREYMELRKD 183
             L+   A+ L+K  F  A ER+I TGDK+ +V+   G  + ++++ LR+D
Sbjct: 208 PELTLERAISLMKDSFRGAAEREISTGDKIHLVIAEAGKPVVQKFLPLRED 258


>gi|395325433|gb|EJF57855.1| proteasome subunit [Dichomitus squalens LYAD-421 SS1]
          Length = 252

 Score =  127 bits (319), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 70/161 (43%), Positives = 96/161 (59%), Gaps = 5/161 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+ V+A +GF AD     K +  R   Y+H H K M    +A+L+   LY +RFFPYY +
Sbjct: 60  DRAVLAVNGFAADGNMFVKKVKQRLEWYRHAHAKDMPLHAIARLIQTMLYAQRFFPYYVY 119

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL--KSPSPLLLPAQD 131
           N+LGG++ +G G VY++D VGSYER    + G+  +L+ PFLDNQ+  K+       +  
Sbjct: 120 NILGGIEEDGSGAVYSFDPVGSYEREACRAAGAAQSLVQPFLDNQIYFKNQKAAAGQSHP 179

Query: 132 AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEI-VVLNKG 171
           A  PLS+  A+  V   F SATER I  GD LEI VV+ KG
Sbjct: 180 AHLPLSDVLAI--VIDSFTSATERHIEVGDGLEIYVVVAKG 218


>gi|392592203|gb|EIW81530.1| 20S proteasome subunit [Coniophora puteana RWD-64-598 SS2]
          Length = 257

 Score =  127 bits (319), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 65/159 (40%), Positives = 92/159 (57%), Gaps = 1/159 (0%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+ V+A +GF AD     K +  R   Y+H H K M    +A+L+   LY +RFFPYY +
Sbjct: 65  DRAVLAVNGFAADGNMFVKKVKQRLEWYRHAHGKDMPLRAIARLIQTMLYARRFFPYYVY 124

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N+LGG++ +G G VY++D VGSYER    + G+  +L+ PFLDNQ+   +    P     
Sbjct: 125 NILGGIEEDGTGAVYSFDPVGSYEREACRAAGAAQSLVQPFLDNQIYFKNQTAPPDSAHP 184

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEI-VVLNKG 171
           T L     + +V   F SATER I  GD LE+ +VL +G
Sbjct: 185 THLPLPTVLSIVIDSFTSATERHIEVGDGLEMYIVLARG 223


>gi|342182103|emb|CCC91582.1| proteasome beta 6 subunit [Trypanosoma congolense IL3000]
          Length = 258

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 100/175 (57%), Gaps = 13/175 (7%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPGMAQLLSNTLYYKRFFPYYS 72
           D+  +ASSG QAD   LQ++L  R   Y++ +  K  S   +A+L+S  LY +RFFPYY+
Sbjct: 92  DRVFLASSGMQADRLQLQRMLQYRIQWYRYNNGGKTPSTKAIAKLVSTVLYQRRFFPYYT 151

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FN++ GLD +G G  Y+YDAVGS E   Y + GS S+ + P +D         LL  Q  
Sbjct: 152 FNMIVGLDEQGAGVCYSYDAVGSTEPSRYGTCGSASSFVEPLMD--------CLLTRQHM 203

Query: 133 VTP----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           VT     LS  E + ++K  F  A ERDI+TGD +   V+   GI  E  ELRKD
Sbjct: 204 VTSVPPELSVEEVLGMMKDAFTGAAERDIFTGDSVCFHVITAEGIRTEMFELRKD 258


>gi|149237248|ref|XP_001524501.1| proteasome component C5 [Lodderomyces elongisporus NRRL YB-4239]
 gi|146452036|gb|EDK46292.1| proteasome component C5 [Lodderomyces elongisporus NRRL YB-4239]
          Length = 243

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 72/177 (40%), Positives = 102/177 (57%), Gaps = 8/177 (4%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQH-NKQMSCPGMAQLLSNTLYYKRFFPYY 71
            D  +M ++GF AD  AL          Y+  + N+++     A+ + + LY KRFFPY 
Sbjct: 69  GDNILMTANGFAADGVALIDRFKQSFKWYKFDNENRKLEISSAARYIQHLLYGKRFFPYV 128

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
           S  ++ GLD EGKG VY+YD VGSYER    + G+ ++LIMPFLDNQ+   +   +P  D
Sbjct: 129 S-TLIAGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQ-YVPGTD 186

Query: 132 A-----VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                 +  LS  E + LV+  F SA ER IY GD LEI+++ K G+  EY  L++D
Sbjct: 187 GKEKKPLKYLSLEEVIQLVRDAFTSAGERHIYVGDGLEIMIVTKDGVRTEYFPLKRD 243


>gi|308502323|ref|XP_003113346.1| CRE-PBS-6 protein [Caenorhabditis remanei]
 gi|308265647|gb|EFP09600.1| CRE-PBS-6 protein [Caenorhabditis remanei]
          Length = 258

 Score =  126 bits (317), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 66/171 (38%), Positives = 102/171 (59%), Gaps = 4/171 (2%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D  ++ +SGF  DV  L+K+L +R   Y+  +   MS    A+LLS  LYY+RFFPYY+ 
Sbjct: 91  DSIILTTSGFYGDVLQLKKVLQSRLHKYRFDYRADMSVDLCAELLSRNLYYRRFFPYYTG 150

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            +L G+D  GKG V++YD +G  ER+ YS+ G+   +I+PFLD Q+     + L      
Sbjct: 151 AILAGIDENGKGAVFSYDPIGCIERLTYSASGAAEPMIIPFLDCQI---GHVTLAEGYER 207

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG-IHREYMELRKD 183
             L+   A+ L+K  F  A ER+I TGDK+ +V+   G  + ++++ LR+D
Sbjct: 208 PQLTLERAISLMKDSFRGAAEREISTGDKIHLVIAETGKPVVQKFLPLRED 258


>gi|448105494|ref|XP_004200509.1| Piso0_003099 [Millerozyma farinosa CBS 7064]
 gi|448108619|ref|XP_004201140.1| Piso0_003099 [Millerozyma farinosa CBS 7064]
 gi|359381931|emb|CCE80768.1| Piso0_003099 [Millerozyma farinosa CBS 7064]
 gi|359382696|emb|CCE80003.1| Piso0_003099 [Millerozyma farinosa CBS 7064]
          Length = 241

 Score =  126 bits (317), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 72/177 (40%), Positives = 101/177 (57%), Gaps = 7/177 (3%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPGMAQLLSNTLYYKRFFPYY 71
            D  +M ++GF AD  AL          Y+  H  K++S    A+ + + LY KRFFP+Y
Sbjct: 66  GDNILMTANGFSADGNALINKFKNSLKWYKFDHGGKKLSIKSAARYIQHLLYGKRFFPFY 125

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
              ++ GL++EGKG VY+YD VGSYE     + G+ ++LIMPFLDNQ+   +    P  +
Sbjct: 126 VSTLIAGLNDEGKGVVYSYDPVGSYEVEQCRAGGAAASLIMPFLDNQVNFKNQ-YEPGTN 184

Query: 132 A-----VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                 +  LS  E V LV+  F S TER IY GD LEI ++NK G+  EY  L++D
Sbjct: 185 GEKKKELRYLSLDEVVQLVRDAFTSVTERHIYVGDGLEIYIVNKDGVKVEYYPLKRD 241


>gi|256075409|ref|XP_002574012.1| proteasome subunit beta 1 (T01 family) [Schistosoma mansoni]
 gi|353229361|emb|CCD75532.1| proteasome subunit beta 1 (T01 family) [Schistosoma mansoni]
          Length = 212

 Score =  126 bits (316), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 69/167 (41%), Positives = 98/167 (58%), Gaps = 6/167 (3%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           ++  +GF  DV  L KLL  +   +++ H K +S   +A LLS TLY +RFFP+Y  NVL
Sbjct: 52  ILGCAGFHGDVLTLTKLLENKVKTFRYDHGKNISTKALAGLLSVTLYNRRFFPFYVSNVL 111

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPL 136
            GLD EG+G +Y+YD VGSYE  GY + GS S ++ PFLD+ + + +     ++  V+ L
Sbjct: 112 VGLD-EGRGVLYSYDPVGSYESEGYRASGSSSAILQPFLDSTVGNKT-----SKYHVSRL 165

Query: 137 SEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            +  AV L    F SA ERDI  GD + I  + K G+      LR+D
Sbjct: 166 DKETAVKLTHDIFISAAERDIQCGDSVIICTITKDGLSEVSYPLRRD 212


>gi|328849593|gb|EGF98770.1| hypothetical protein MELLADRAFT_73512 [Melampsora larici-populina
           98AG31]
          Length = 239

 Score =  125 bits (315), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 72/189 (38%), Positives = 101/189 (53%), Gaps = 21/189 (11%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+C +A +GF AD K L K +  R + Y H H+   S   +A+L+   LY +RFFPYY++
Sbjct: 53  DQCCIAVNGFAADAKELVKQIKQRLVWYNHTHSSMPSLQSIARLIQTMLYGRRFFPYYAY 112

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ------LKSPSPLLL 127
            +L G+D +G G VY++D VGSYER    + G+  +L+ PFLDNQ      ++ P+    
Sbjct: 113 VILAGIDRDGTGAVYSFDPVGSYERESCRAAGAAQSLVQPFLDNQVGGKNMIRDPNGPPA 172

Query: 128 PAQD------------AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKG-GIH 174
           P +             A  PL   EA  LV   F  ATER I  GD LEI V+  G G+ 
Sbjct: 173 PVEPVYGKGESYTPPRADLPLERVEA--LVTDAFTGATERHIEVGDGLEIFVIEVGKGVR 230

Query: 175 REYMELRKD 183
                L++D
Sbjct: 231 VIQKPLKRD 239


>gi|123447011|ref|XP_001312251.1| Family T1, proteasome beta subunit, threonine peptidase
           [Trichomonas vaginalis G3]
 gi|121894091|gb|EAX99321.1| Family T1, proteasome beta subunit, threonine peptidase
           [Trichomonas vaginalis G3]
          Length = 224

 Score =  125 bits (315), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 66/168 (39%), Positives = 100/168 (59%), Gaps = 4/168 (2%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
            C+++++GF  D+ A    + +  L Y++QH  +MS   +A+ +SNTLY KRFFPYY   
Sbjct: 60  NCMISATGFDGDIDAFITRMRSILLNYENQHFHEMSVESVARCVSNTLYSKRFFPYYINI 119

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 134
           ++GG+++EGKG +Y YD VG+ E + Y S GSGS+L  P LD+   +      P      
Sbjct: 120 LVGGINSEGKGKLYGYDPVGTIEDLHYDSNGSGSSLAAPLLDSAFGTIHHNTRP----FP 175

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRK 182
            +S  +A ++V+    S TERDIYTGD L++ V  K G  +E   L +
Sbjct: 176 AVSLQDAKNIVRDAICSVTERDIYTGDALQLCVFTKDGFAQEEFPLPR 223


>gi|71654519|ref|XP_815877.1| proteasome beta 6 subunit [Trypanosoma cruzi strain CL Brener]
 gi|70880966|gb|EAN94026.1| proteasome beta 6 subunit, putative [Trypanosoma cruzi]
          Length = 246

 Score =  125 bits (313), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 68/172 (39%), Positives = 98/172 (56%), Gaps = 5/172 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQM-SCPGMAQLLSNTLYYKRFFPYY 71
            +   +AS+G QAD   LQ++L  R   YQ+ +  ++ S   +A+L S  LY +RFFPYY
Sbjct: 79  TEHTFLASTGMQADRLQLQQMLKYRIQWYQYNNGGKLPSTKAIAKLTSTMLYQRRFFPYY 138

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
           +FN++ GLD +G G  Y+YD VGS E   Y + GS S+ + P +D  L     +    Q 
Sbjct: 139 TFNMVVGLDEKGAGVCYSYDPVGSTEPFRYGTSGSASSFVEPLMDCLLTRQHMV----QQ 194

Query: 132 AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           A   LS  E ++++K  F  A ERDI+TGD +   ++   GI  E  ELRKD
Sbjct: 195 APAELSMTETLEMLKNAFTGAAERDIFTGDAVCFHIITADGIRSELFELRKD 246


>gi|377834609|ref|XP_003689507.1| PREDICTED: proteasome subunit beta type-1-like [Mus musculus]
          Length = 276

 Score =  125 bits (313), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 71/170 (41%), Positives = 94/170 (55%), Gaps = 9/170 (5%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++  R      + NK M    +A +LS     +RFFPYY +
Sbjct: 75  DKTVIGCSGFHGDCLTLTKIIETRL-----KMNKAMRTGAVAAMLSTIPCSRRFFPYYVY 129

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N++GGLD EGKG VY++D VGSY+R    +  S S  + P L NQ        + + + V
Sbjct: 130 NIIGGLDEEGKGAVYSFDPVGSYQRDSVKAGASASATLQPLLHNQTGFRR---MQSVEHV 186

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            P     A+ LVK  F SA ERD+YTGD L I ++ K GI  E + LRKD
Sbjct: 187 -PRILDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 235


>gi|156084624|ref|XP_001609795.1| proteasome A-type and B-type family protein [Babesia bovis]
 gi|154797047|gb|EDO06227.1| proteasome A-type and B-type family protein [Babesia bovis]
          Length = 217

 Score =  125 bits (313), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 62/154 (40%), Positives = 95/154 (61%), Gaps = 5/154 (3%)

Query: 16  CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNV 75
           CV+ +SG QAD+ AL   L  +  +Y+ +H+++     +AQLLS  LY +RFFPYY+FN+
Sbjct: 55  CVIGTSGMQADMHALHSALERQIELYRFKHHREPGISVIAQLLSTILYSRRFFPYYTFNI 114

Query: 76  LGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP 135
           L G+D  G+G    +DA+G+Y    Y ++G+ S+LIM  LDN L S +      Q     
Sbjct: 115 LCGVDENGRGITCGFDAIGNYGFDAYMAKGTSSSLIMSILDNHLTSRNQ-----QKHNEI 169

Query: 136 LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 169
            S  E ++++K    SA ERDI+TGD  E++V++
Sbjct: 170 QSLEELINVIKGAMTSAVERDIFTGDAAEVIVID 203


>gi|407420511|gb|EKF38599.1| proteasome beta 6 subunit, putative,20S proteasome beta 6 subunit,
           putative [Trypanosoma cruzi marinkellei]
          Length = 246

 Score =  125 bits (313), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 68/172 (39%), Positives = 98/172 (56%), Gaps = 5/172 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQM-SCPGMAQLLSNTLYYKRFFPYY 71
            +   +AS+G QAD   LQ++L  R   YQ+ +  ++ S   +A+L S  LY +RFFPYY
Sbjct: 79  TEHTFLASTGMQADRLQLQQMLKYRIQWYQYNNGGKLPSTKAIAKLTSTMLYQRRFFPYY 138

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
           +FN++ GLD +G G  Y+YD VGS E   Y + GS S+ + P +D  L     +    Q 
Sbjct: 139 TFNMVVGLDEKGAGVCYSYDPVGSTEPFRYGTSGSASSFVEPLMDCLLTRQHMV----QQ 194

Query: 132 AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           A   LS  E ++++K  F  A ERDI+TGD +   ++   GI  E  ELRKD
Sbjct: 195 APAELSMTETLEMLKNAFTGAAERDIFTGDAVCFHIITADGIRSELFELRKD 246


>gi|405946999|gb|EKC17751.1| Proteasome subunit beta type-1 [Crassostrea gigas]
          Length = 128

 Score =  125 bits (313), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 65/135 (48%), Positives = 85/135 (62%), Gaps = 15/135 (11%)

Query: 57  LLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLD 116
           +L+NTLY +RFFPYY++N+L GLD  G GCVY+YD VG+YERV  +  GSG +LI P LD
Sbjct: 1   MLANTLYGRRFFPYYTWNILAGLDENGVGCVYSYDPVGNYERVRVNVTGSGESLIQPLLD 60

Query: 117 NQLK--------SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVL 168
           NQ +         P PL +        LS A+  ++VK  F SA ERDIYTGD +E++V+
Sbjct: 61  NQFERQHQQFAAKPPPLNV-------DLSLADTEEIVKDAFYSAGERDIYTGDTVEVMVI 113

Query: 169 NKGGIHREYMELRKD 183
              G+  E  EL  D
Sbjct: 114 TGEGVRIETHELNID 128


>gi|71655250|ref|XP_816231.1| proteasome beta 6 subunit [Trypanosoma cruzi strain CL Brener]
 gi|70881343|gb|EAN94380.1| proteasome beta 6 subunit, putative [Trypanosoma cruzi]
          Length = 246

 Score =  125 bits (313), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 68/172 (39%), Positives = 98/172 (56%), Gaps = 5/172 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQM-SCPGMAQLLSNTLYYKRFFPYY 71
            +   +AS+G QAD   LQ++L  R   YQ+ +  ++ S   +A+L S  LY +RFFPYY
Sbjct: 79  TEHTFLASTGMQADRLQLQQMLKYRIQWYQYNNGGKLPSTKAIAKLTSTMLYQRRFFPYY 138

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
           +FN++ GLD +G G  Y+YD VGS E   Y + GS S+ + P +D  L     +    Q 
Sbjct: 139 TFNMVVGLDEKGAGVCYSYDPVGSTEPFRYGTSGSASSFVEPLMDCLLTRQHMV----QQ 194

Query: 132 AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           A   LS  E ++++K  F  A ERDI+TGD +   ++   GI  E  ELRKD
Sbjct: 195 APAELSMTETLEMLKNAFTGAAERDIFTGDAVCFHIITADGIRSELFELRKD 246


>gi|170089877|ref|XP_001876161.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
 gi|164649421|gb|EDR13663.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
          Length = 249

 Score =  124 bits (312), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 63/155 (40%), Positives = 88/155 (56%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+A +GF AD     K +  R   Y+H H+K M    +A+L+   LY +RFFPYY +
Sbjct: 56  DKAVLAVNGFAADGNMFVKKVRQRLEWYRHAHSKDMPIRAIARLIQTMLYARRFFPYYVY 115

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N+LGG++ +G G VY++D VGSYER    + G+  +L+ PFLDNQ+   +    P     
Sbjct: 116 NILGGIEEDGTGAVYSFDPVGSYEREACRAAGAAQSLMQPFLDNQIYFKNQTPAPGTSFP 175

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVL 168
             L     + LV   F  ATER I  GD LE+ V+
Sbjct: 176 QHLPLNTVLSLVIDSFTGATERHIEVGDSLEMYVV 210


>gi|388581296|gb|EIM21605.1| 20S proteasome subunit [Wallemia sebi CBS 633.66]
          Length = 255

 Score =  124 bits (312), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 65/159 (40%), Positives = 94/159 (59%), Gaps = 6/159 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           +K  +A++GF AD K L K +  R   Y++ HNK+M    +A+++   LY KRFFP+YS+
Sbjct: 49  EKATIAANGFAADCKQLVKRVKWRLETYKYAHNKEMPLKSIARMVQTMLYGKRFFPFYSY 108

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL----KSPSPLLLPA 129
            ++GG+D+EG G VY +D VGSYER    + G+  +L+ PFLDNQ+    + P+    P 
Sbjct: 109 VIIGGIDDEGTGAVYGFDPVGSYERETCRAAGAAQSLLQPFLDNQIYFRNQEPADPANPP 168

Query: 130 QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVL 168
                PL    A+  V   F  ATER I  GD LE+ V+
Sbjct: 169 IPGNLPLETVLAI--VTDSFTGATERHIEVGDALEMYVV 205


>gi|358054309|dbj|GAA99235.1| hypothetical protein E5Q_05929 [Mixia osmundae IAM 14324]
          Length = 250

 Score =  124 bits (311), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/180 (40%), Positives = 100/180 (55%), Gaps = 10/180 (5%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+ VMA+ GF AD   L K L  R   Y H H K      +A+L+   LY KRFFPYYS+
Sbjct: 67  DETVMATQGFMADSNTLVKKLRQRLEWYFHTHQKYPDLTAIARLVQTMLYGKRFFPYYSY 126

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKS-----PSPLLLP 128
            +LGG+D +G G VY++D VGSYER    S G+  +L+ PFLDNQ+       P    + 
Sbjct: 127 VILGGIDRDGTGAVYSFDPVGSYERESCRSAGAAQSLVQPFLDNQVMGKNQNLPKGESIL 186

Query: 129 AQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVL----NKGGIHREYMEL-RKD 183
            ++  + L     + LV   F  ATER I  GD LE+ VL     +GG ++  +++ R+D
Sbjct: 187 DEEGRSNLPLERVLGLVVDSFTGATERHIEVGDGLEMYVLKVVSREGGKNKVELDIVRRD 246


>gi|309271453|ref|XP_003085312.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Mus musculus]
          Length = 730

 Score =  124 bits (311), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 71/173 (41%), Positives = 92/173 (53%), Gaps = 13/173 (7%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            DK V+  SGF  D   L K++  R      + NK M    +A +LS     +RFFPYY 
Sbjct: 74  TDKTVIGCSGFHGDCLTLTKIIETRL-----KMNKAMRTGAVAAMLSTIPCSRRFFPYYV 128

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           +N++GGLD EGKG VY++D VGSY+R    +  S S  + P L NQ             +
Sbjct: 129 YNIIGGLDEEGKGAVYSFDPVGSYQRDSVKAGASASATLQPLLHNQTG------FRRMQS 182

Query: 133 V--TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           V   P     A+ LVK  F SA ERD+YTGD L I ++ K GI  E + LRKD
Sbjct: 183 VEHVPRILDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD 235


>gi|46397057|sp|Q9U794.1|PSB1_TRYBB RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S
           proteasome subunit beta-6
 gi|6224687|gb|AAF05905.1|AF148124_1 20S proteasome beta 6 subunit [Trypanosoma brucei brucei]
 gi|261329654|emb|CBH12636.1| 20S proteasome beta 6 subunit, putative [Trypanosoma brucei
           gambiense DAL972]
          Length = 258

 Score =  124 bits (311), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 71/176 (40%), Positives = 100/176 (56%), Gaps = 13/176 (7%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQM-SCPGMAQLLSNTLYYKRFFPYY 71
            D+  +ASSG QAD   LQ++L  R   YQ+ +  ++ S   +A+L S  LY +RFFPYY
Sbjct: 91  TDRIFLASSGMQADRLQLQQMLKYRIQWYQYNNGGKVPSTKAIAKLTSTMLYQRRFFPYY 150

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
           +FN++ G+D +G G  Y+YD VGS E   Y + GS S+ + P LD         LL  Q 
Sbjct: 151 TFNMIVGIDEKGAGVCYSYDPVGSTEPFRYGTCGSASSFVEPLLD--------CLLTRQH 202

Query: 132 AVT----PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            VT     L+  EA+ ++K  F  A ERDI+TGD +   ++   G+  E  ELRKD
Sbjct: 203 MVTQAPADLTMEEALGMLKNAFTGAAERDIFTGDTVCFHIITADGVGTEMFELRKD 258


>gi|72391616|ref|XP_846102.1| proteasome beta 6 subunit [Trypanosoma brucei brucei strain 927/4
           GUTat10.1]
 gi|62175642|gb|AAX69774.1| proteasome beta 6 subunit [Trypanosoma brucei]
 gi|70802638|gb|AAZ12543.1| proteasome beta 6 subunit [Trypanosoma brucei brucei strain 927/4
           GUTat10.1]
          Length = 258

 Score =  124 bits (310), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 71/176 (40%), Positives = 100/176 (56%), Gaps = 13/176 (7%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQM-SCPGMAQLLSNTLYYKRFFPYY 71
            D+  +ASSG QAD   LQ++L  R   YQ+ +  ++ S   +A+L S  LY +RFFPYY
Sbjct: 91  TDRIFLASSGMQADRLQLQQMLKYRIQWYQYNNGGKVPSTKAIAKLTSTMLYQRRFFPYY 150

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
           +FN++ G+D +G G  Y+YD VGS E   Y + GS S+ + P LD         LL  Q 
Sbjct: 151 TFNMIVGIDEKGAGVCYSYDPVGSTEPFRYGTCGSASSFVEPLLD--------CLLTRQH 202

Query: 132 AVT----PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            VT     L+  EA+ ++K  F  A ERDI+TGD +   ++   G+  E  ELRKD
Sbjct: 203 MVTQAPADLTMEEALGMLKNAFTGAAERDIFTGDTVCFHIVTADGVGTEMFELRKD 258


>gi|393229883|gb|EJD37498.1| proteasome subunit [Auricularia delicata TFB-10046 SS5]
          Length = 242

 Score =  124 bits (310), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 93/164 (56%), Gaps = 15/164 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+A +GF AD     K +  R   Y+H H+K M    +A+++   LY KRFFPYY +
Sbjct: 52  DKAVLAVNGFAADGNMFVKKVKQRLEWYRHAHSKDMPLQSIARMIQTMLYAKRFFPYYVY 111

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL-----KSPSPLLLP 128
           N+LGG+D +G G VY++D VGSYER    + G+  +L+ PFLDNQ+     +   P  LP
Sbjct: 112 NILGGIDEQGVGAVYSFDPVGSYERETCRAAGAAQSLVQPFLDNQIYFKNQQGDHPAHLP 171

Query: 129 AQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEI-VVLNKG 171
               ++         LV   F  ATER I  GD L++ V+L +G
Sbjct: 172 LDHVLS---------LVTDAFTGATERHIEVGDGLQMFVILARG 206


>gi|299116145|emb|CBN76052.1| proteasome beta subunit [Ectocarpus siliculosus]
          Length = 249

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 65/171 (38%), Positives = 101/171 (59%), Gaps = 8/171 (4%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLG 77
           +A++G  AD + L +LL      Y+ +  + M    ++++LS  LYY+R FP+Y+FN++G
Sbjct: 78  LATAGCWADTQGLLRLLEYLIRDYEMEQRRTMGTKAVSRMLSTHLYYRRGFPFYTFNIVG 137

Query: 78  GLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPL-------LLPAQ 130
           GLD EG G VY YDAVGS+ERV  +  G G +L+ P LD +L +   +           +
Sbjct: 138 GLDEEGIGAVYGYDAVGSFERVRVACAGGGLSLMQPVLD-RLDAAEAVTGAGGCGRAGRE 196

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELR 181
             V  +   EA+ LV+  F +  ERDI  GD++EIVV+ + G  RE ++L+
Sbjct: 197 QPVVAVGLEEALALVRRAFVAGGERDISLGDEVEIVVVTRQGHRRERLQLK 247


>gi|407853394|gb|EKG06411.1| proteasome beta 6 subunit, putative,20S proteasome beta 6 subunit,
           putative [Trypanosoma cruzi]
          Length = 246

 Score =  123 bits (308), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 67/172 (38%), Positives = 97/172 (56%), Gaps = 5/172 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQM-SCPGMAQLLSNTLYYKRFFPYY 71
            +   +AS+G QAD   LQ++L  R   YQ+ +  ++ S   +A+L S  LY +RFFPYY
Sbjct: 79  TEHTFLASTGMQADRLQLQQMLKYRIQWYQYNNGGKLPSTKAIAKLTSTMLYQRRFFPYY 138

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
           +FN++ GLD +G G  Y+YD VGS E   Y + GS S+ + P +D  L     +    Q 
Sbjct: 139 TFNMVVGLDEKGAGVCYSYDPVGSTEPFRYGTSGSASSFVEPLMDCLLTRQHMV----QQ 194

Query: 132 AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           A   LS  E ++++K  F  A ERDI+TGD +   ++   GI  E  ELR D
Sbjct: 195 APAELSMTETLEMLKNAFTGAAERDIFTGDAVCFHIITADGIRSELFELRND 246


>gi|308159821|gb|EFO62339.1| Proteasome subunit beta type 1 [Giardia lamblia P15]
          Length = 214

 Score =  123 bits (308), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 63/170 (37%), Positives = 97/170 (57%), Gaps = 9/170 (5%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V A+SG  ADV+ L K +      Y  +  K+++     +LLS  +YY+R FP+Y+ 
Sbjct: 54  DKIVYAASGMHADVQRLIKHMKIESTEYYLKTQKEIAIEQFIRLLSAMMYYRRSFPWYTS 113

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           +++ G+D+EGKG VY+YD +GS  R  Y S G+G+ +I P LD  + S +          
Sbjct: 114 SIVAGIDSEGKGAVYSYDVIGSTLRTRYGSAGTGNAMICPILDEAILSKNE--------- 164

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             ++   A +L+++ F S  ERDIYTGD +  + ++  GI     ELRKD
Sbjct: 165 AEITREFAFELIQSAFRSCAERDIYTGDSVVAMCISADGIQERTFELRKD 214


>gi|299743502|ref|XP_001835816.2| proteasome subunit [Coprinopsis cinerea okayama7#130]
 gi|298405683|gb|EAU85881.2| proteasome subunit [Coprinopsis cinerea okayama7#130]
          Length = 253

 Score =  123 bits (308), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 63/155 (40%), Positives = 87/155 (56%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+A +GF AD     K +  R   Y+H H K M    +A+L+   LY +RFFPYY +
Sbjct: 60  DKAVLAVNGFAADGNMFVKKVKQRLEWYRHAHAKDMPIRSIARLIQTMLYARRFFPYYVY 119

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           N+LGG++ +G G VY++D VGSYER    + G+  +L+ PFLDNQ+   +    P     
Sbjct: 120 NILGGIEEDGTGAVYSFDPVGSYERETCRAAGAAQSLVQPFLDNQIYFKNQTPAPGTSFP 179

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVL 168
             L     + LV   F  ATER I  GD LE+ V+
Sbjct: 180 QHLPLQTVLALVIDSFTGATERHIEVGDGLEMYVV 214


>gi|403171610|ref|XP_003330811.2| 20S proteasome subunit beta 6 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|375169259|gb|EFP86392.2| 20S proteasome subunit beta 6 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 255

 Score =  122 bits (305), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 100/187 (53%), Gaps = 17/187 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           ++C +A +GF AD K L K L  R   YQH H  Q S   +A+L+   LY +RFFPYY++
Sbjct: 69  EECCIAVNGFAADGKELVKQLKQRLQWYQHTHASQPSVQSIARLVQTMLYGRRFFPYYAY 128

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPS---------- 123
            +L G+D +G G VY++D VGSYER    + G+  +L+ PFLDNQ+   +          
Sbjct: 129 VILAGIDRDGTGAVYSFDPVGSYERESCRAAGAAQSLVQPFLDNQVGGKNMTRDPSGPAP 188

Query: 124 ---PLLLPAQDAVTPLSE--AEAVD-LVKTCFASATERDIYTGDKLEIVVLNKG-GIHRE 176
              P+    Q    P S+   E V  LV   F  A ER I  GD LEI ++  G G+   
Sbjct: 189 PPEPVYAQGQSYTPPRSQLPLEKVQALVTDAFTGAAERHIEVGDGLEIFIIEAGKGVRVV 248

Query: 177 YMELRKD 183
             EL++D
Sbjct: 249 RKELKRD 255


>gi|159118134|ref|XP_001709286.1| Proteasome subunit beta type 1 [Giardia lamblia ATCC 50803]
 gi|157437402|gb|EDO81612.1| Proteasome subunit beta type 1 [Giardia lamblia ATCC 50803]
          Length = 254

 Score =  121 bits (304), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 62/170 (36%), Positives = 97/170 (57%), Gaps = 9/170 (5%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V A+SG  ADV+ L K +      Y  +  K+++     +LLS  +YY+R FP+Y+ 
Sbjct: 94  DKIVYAASGMHADVQRLLKHMKIESTEYYLKTQKEIAIEQFIRLLSAMMYYRRSFPWYTS 153

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           +++ G+D+EG+G VY+YD +GS  R  Y S G+G+ +I P LD  + S +          
Sbjct: 154 SIVAGIDSEGRGAVYSYDVIGSTLRTRYGSAGTGNAMICPILDEAILSKNE--------- 204

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             ++   A +L+++ F S  ERDIYTGD +  + ++  GI     ELRKD
Sbjct: 205 AEITREFAFELIQSAFRSCAERDIYTGDSVVAMCISADGIQERTFELRKD 254


>gi|19115641|ref|NP_594729.1| 20S proteasome component beta 6 [Schizosaccharomyces pombe 972h-]
 gi|17380232|sp|Q9UQY2.1|PSB6_SCHPO RecName: Full=Probable proteasome subunit beta type-6
 gi|5734483|emb|CAB52716.1| 20S proteasome component beta 6 [Schizosaccharomyces pombe]
 gi|6681370|dbj|BAA88692.1| catalytic subunit (C5) of proteasome [Schizosaccharomyces pombe]
          Length = 225

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 67/183 (36%), Positives = 94/183 (51%), Gaps = 20/183 (10%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            D  V+ +SGF+AD  AL K +  R  +Y   H ++MS    A ++   LY KRFFPYY 
Sbjct: 51  GDDLVIGASGFEADALALVKRIQQRIDLYHDNHERKMSAQSCACMVRTLLYGKRFFPYYV 110

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL------------K 120
           +  + G+D EGKG +Y++D VGSYER    + GS +  I PFLDNQ+            K
Sbjct: 111 YTTVAGIDKEGKGEIYSFDPVGSYEREWCRAGGSAANFITPFLDNQVNLHNQYVPGSHGK 170

Query: 121 SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMEL 180
              P  L        L   EA+ +    F SA ER I  GD + + ++ K G+    + L
Sbjct: 171 ERKPRRL--------LKLEEAMKITTDAFTSAGERHIEVGDSVLVKIITKEGVETRIIPL 222

Query: 181 RKD 183
           +KD
Sbjct: 223 KKD 225


>gi|388507486|gb|AFK41809.1| unknown [Medicago truncatula]
          Length = 158

 Score =  120 bits (300), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 54/60 (90%), Positives = 57/60 (95%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           A+KCVMA SGFQADVKALQK+L+ARHL YQHQHNKQMSCP MAQLLSNTLYYKRFFPYYS
Sbjct: 53  AEKCVMAPSGFQADVKALQKVLSARHLTYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYS 112


>gi|226489268|emb|CAX75778.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
           japonicum]
          Length = 212

 Score =  119 bits (298), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 65/167 (38%), Positives = 97/167 (58%), Gaps = 6/167 (3%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V+  +GF  DV  L KLL  +   Y++ H K +S   +A LLS +LY +RFFP+Y  N+L
Sbjct: 52  VLGCAGFHGDVLTLTKLLENKVKTYRYDHGKDISTKALAGLLSVSLYNRRFFPFYVSNIL 111

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPL 136
            GLD + +G +Y+YD VGSYE  GY + GS + ++ PFLD+ + + +     ++  V+ L
Sbjct: 112 VGLDGD-RGVLYSYDPVGSYEAEGYRASGSSAAILQPFLDSTVGNKT-----SKYHVSRL 165

Query: 137 SEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           ++  AV L    F SA ERD   GD + I  + K G+      LR+D
Sbjct: 166 NKETAVKLTHDIFISAAERDTQCGDGVVIYTVTKDGLSETSYPLRRD 212


>gi|56758256|gb|AAW27268.1| SJCHGC09410 protein [Schistosoma japonicum]
 gi|226489270|emb|CAX75779.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
           japonicum]
 gi|226489272|emb|CAX75780.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
           japonicum]
 gi|226489274|emb|CAX75781.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
           japonicum]
          Length = 212

 Score =  119 bits (298), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 65/167 (38%), Positives = 97/167 (58%), Gaps = 6/167 (3%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V+  +GF  DV  L KLL  +   Y++ H K +S   +A LLS +LY +RFFP+Y  N+L
Sbjct: 52  VLGCAGFHGDVLTLTKLLENKVKTYRYDHGKDISTKALAGLLSVSLYNRRFFPFYVSNIL 111

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPL 136
            GLD + +G +Y+YD VGSYE  GY + GS + ++ PFLD+ + + +     ++  V+ L
Sbjct: 112 VGLDGD-RGVLYSYDPVGSYEAEGYRASGSSAAILQPFLDSTVGNKT-----SKYHVSRL 165

Query: 137 SEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           ++  AV L    F SA ERD   GD + I  + K G+      LR+D
Sbjct: 166 NKETAVKLTHDIFISAAERDTQCGDGVVIYTVTKDGLSETSYPLRRD 212


>gi|226471340|emb|CAX70751.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
           japonicum]
          Length = 212

 Score =  119 bits (297), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 65/167 (38%), Positives = 97/167 (58%), Gaps = 6/167 (3%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V+  +GF  DV  L KLL  +   Y++ H K +S   +A LLS +LY +RFFP+Y  N+L
Sbjct: 52  VLGYAGFHGDVLTLTKLLENKVKTYRYDHGKDISTKALAGLLSVSLYNRRFFPFYVSNIL 111

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPL 136
            GLD + +G +Y+YD VGSYE  GY + GS + ++ PFLD+ + + +     ++  V+ L
Sbjct: 112 VGLDGD-RGVLYSYDPVGSYEAEGYRASGSSAAILQPFLDSTVGNKT-----SKYHVSRL 165

Query: 137 SEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           ++  AV L    F SA ERD   GD + I  + K G+      LR+D
Sbjct: 166 NKETAVKLTHDIFISAAERDTQCGDGVVIYTVTKDGLSETSYPLRRD 212


>gi|67526071|ref|XP_661097.1| hypothetical protein AN3493.2 [Aspergillus nidulans FGSC A4]
 gi|40739864|gb|EAA59054.1| hypothetical protein AN3493.2 [Aspergillus nidulans FGSC A4]
 gi|259481995|tpe|CBF76042.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
          Length = 215

 Score =  117 bits (293), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/178 (35%), Positives = 101/178 (56%), Gaps = 11/178 (6%)

Query: 6   YILTSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYK 65
           + +   R    V++  GF AD +AL++ L A   +Y++QH K +     AQ +S  LY K
Sbjct: 49  FTIQDARDRSIVISVIGFAADGRALKERLDAIVAMYKYQHGKNIGLRACAQRVSTMLYEK 108

Query: 66  RFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPL 125
           RFFPY    ++ G+D +G+G +Y YD  G  E+  + + G  S+L++PFLD+Q    +P 
Sbjct: 109 RFFPYQLQTMVAGIDADGQGAIYYYDPAGCIEKRSHCAAGEASSLMLPFLDSQ----APR 164

Query: 126 LLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           L        PLS   A  LV+  +  ATER I  GD L+++V+ + G+  + ++L+KD
Sbjct: 165 L-------QPLSLQTAQQLVRDAYTGATERHIEVGDHLQMLVVTREGVSEQLVDLKKD 215


>gi|345560620|gb|EGX43745.1| hypothetical protein AOL_s00215g481 [Arthrobotrys oligospora ATCC
           24927]
          Length = 266

 Score =  117 bits (292), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 63/160 (39%), Positives = 92/160 (57%), Gaps = 6/160 (3%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           ++   G  AD + L + +A +   Y+  H+K ++    A +LS  LY KRFFPYY   +L
Sbjct: 76  ILGVVGMSADGEELVRKVARKIDDYKRNHDKHITVAAAAVMLSRILYQKRFFPYYCQPLL 135

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP- 135
           GGLD EG G +Y+YD VGS+ER    + G+ ++LI PFLDNQ+   +   +P  +   P 
Sbjct: 136 GGLDEEGVGAIYSYDYVGSFEREQSRAYGAAASLITPFLDNQINFKNQ-FVPGSNGEEPR 194

Query: 136 ----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKG 171
               LS+ +   +VK  F SA ER I  GD L++V + KG
Sbjct: 195 PKVDLSKEQVEKIVKDAFTSAVERHIEVGDGLQLVTIVKG 234


>gi|62087736|dbj|BAD92315.1| proteasome beta 1 subunit variant [Homo sapiens]
          Length = 196

 Score =  116 bits (291), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 51/104 (49%), Positives = 71/104 (68%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 81  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 140

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDN 117
           N++GGLD EGKG VY++D VGSY+R  + + GS S ++ P LDN
Sbjct: 141 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDN 184


>gi|190408868|gb|EDV12133.1| proteasome subunit [Saccharomyces cerevisiae RM11-1a]
          Length = 242

 Score =  116 bits (291), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 69/179 (38%), Positives = 96/179 (53%), Gaps = 10/179 (5%)

Query: 13  ADKCVMASSGFQAD----VKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFF 68
            D  VM+++GF AD    VK  +  +   H   Q Q      C       S T   + FF
Sbjct: 66  GDNIVMSANGFAADGDALVKRFKNSVKWYHFGPQRQKIIYKLCSKEYSTSSGTG--RGFF 123

Query: 69  PYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLP 128
           PYY   ++ GLD +GKG VY++D VGSYER    + G+ ++LIMPFLDNQ+   +     
Sbjct: 124 PYYVHTIIAGLDEDGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPG 183

Query: 129 AQDAVTP----LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
               V      LS  E + LV+  F SATER I  GD LEI+++ K G+ +E+ EL++D
Sbjct: 184 TNGKVKKPLKYLSVEEVIKLVRDSFTSATERHIQVGDGLEILIVTKDGVRKEFYELKRD 242


>gi|296413676|ref|XP_002836535.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295630362|emb|CAZ80726.1| unnamed protein product [Tuber melanosporum]
          Length = 257

 Score =  116 bits (291), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/177 (40%), Positives = 103/177 (58%), Gaps = 7/177 (3%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPGMAQLLSNTLYYKRFFPYYS 72
           +  V+A+ GF AD K + + +      ++  HN K MS    AQ LS  LY  RFFP Y+
Sbjct: 81  NSLVLATVGFGADSKDVAETMMRAVNDFKFNHNLKNMSVSAAAQYLSTFLYGNRFFPKYA 140

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVG--YSSQGSGSTLIMPFLDNQLKSPSPLLLPA- 129
             VL GLD +G+  +Y+YD+VGSY + G   +S GS S+LI+PFLDNQ++  +  +  + 
Sbjct: 141 NCVLAGLDKDGRARLYSYDSVGSYSKQGESRASAGSASSLIVPFLDNQVEFKNQFVPSSK 200

Query: 130 ---QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              +  V PL       LVK  F SATER I  GD L+I+ + K G+  E ++L+KD
Sbjct: 201 GQEERPVVPLDPVTVAKLVKDAFTSATERHIEVGDGLQIITVTKDGVSEEVVDLKKD 257


>gi|402466187|gb|EJW01728.1| hypothetical protein EDEG_03753 [Edhazardia aedis USNM 41457]
          Length = 225

 Score =  115 bits (288), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 67/172 (38%), Positives = 100/172 (58%), Gaps = 7/172 (4%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   +  +GF AD   +   L  + + Y+ ++NK+M     A LL N LY KRFFPYYS+
Sbjct: 59  DDLYLIVTGFYADGYEVYINLLYQLIEYESKNNKKMGIRSAAHLLHNLLYRKRFFPYYSY 118

Query: 74  NVLGGLDNEG-KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            +LGG D +  K  ++++D VGSY        GSG+T+I P LD+++       L  ++ 
Sbjct: 119 CILGGFDKKSQKFLLFSFDVVGSYGETVCRVDGSGTTMIQPLLDSRISK-----LNWENN 173

Query: 133 VTPLSEAEAV-DLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            T +++ + V +LVK  F SA ERD+ TGD L++VV+ K GI R   +LR D
Sbjct: 174 DTKVTDCKEVCELVKIAFKSAAERDVKTGDYLDLVVVKKDGIERTLHKLRHD 225


>gi|195173300|ref|XP_002027430.1| GL20944 [Drosophila persimilis]
 gi|194113282|gb|EDW35325.1| GL20944 [Drosophila persimilis]
          Length = 224

 Score =  115 bits (288), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 59/167 (35%), Positives = 93/167 (55%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V+A++G   D  +L  LL  +   Y++QH+K MS   MAQ+LS   Y +R  PY    +L
Sbjct: 56  VVAATGCWCDAVSLTNLLKVKQQGYENQHHKVMSIESMAQMLSVVQYQRRHLPYNVSPIL 115

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPL 136
           GG+D +G+G V++YD +G + R     +G+   ++ P LDNQ+      LL        L
Sbjct: 116 GGIDQDGQGAVFSYDCIGHFVRESSRVEGTAVGILQPVLDNQIGYTKKDLLDETSEQPAL 175

Query: 137 SEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           ++  A+ + K  F +A + D++TGD + I V+ K  I  E M+L KD
Sbjct: 176 TKERALAIAKDAFITAAQSDVFTGDSVIINVITKDSIKVEKMQLGKD 222


>gi|390602798|gb|EIN12190.1| proteasome subunit [Punctularia strigosozonata HHB-11173 SS5]
          Length = 276

 Score =  114 bits (285), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/178 (36%), Positives = 90/178 (50%), Gaps = 20/178 (11%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+ V+A +GF AD     K +  R   Y+H H K M    +A+L+   LY +RFFPYY +
Sbjct: 65  DRAVLAVNGFAADGNMFVKKVKQRLEWYRHAHAKDMPLHAIARLIQTMLYARRFFPYYVY 124

Query: 74  NVLGGLDNE-------------------GKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 114
           N+LGG++ +                   G G VY++D VGSYER    + G+   L+ PF
Sbjct: 125 NILGGIEEDGTSAHSARPAFSSHFPTRTGSGAVYSFDPVGSYERETCRAAGAAQNLVQPF 184

Query: 115 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEI-VVLNKG 171
           LDNQ+   +    P       L   + + LV   F  ATER I  GD LE+ +VL KG
Sbjct: 185 LDNQIYFKNQQPAPGTSHPKHLPLPDVIKLVIDSFTGATERHIEVGDGLEMYIVLAKG 242


>gi|387592573|gb|EIJ87597.1| hypothetical protein NEQG_02144 [Nematocida parisii ERTm3]
 gi|387595200|gb|EIJ92825.1| hypothetical protein NEPG_02224 [Nematocida parisii ERTm1]
          Length = 242

 Score =  112 bits (280), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 63/173 (36%), Positives = 95/173 (54%), Gaps = 2/173 (1%)

Query: 11  CRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPY 70
           C   + +++++GF AD + +   LA +   YQ ++NK+M     A LL   LY  RFFP 
Sbjct: 72  CLDGRFILSTTGFYADSRFVYTELAYQIDKYQFKYNKKMGIEQAAALLHVLLYKHRFFPK 131

Query: 71  YSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQ 130
           +++  L G + E K  +++YD VGSY+       GSG+T++ P LD+ +   +      +
Sbjct: 132 FTYCCLVGFNEEEKPKIFSYDPVGSYQETPCRCNGSGTTMLQPMLDSWITRKNWHCEEGK 191

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           D V   +E E + LVK  F S  E D+ TGD LE+ V+ K GI RE   LR D
Sbjct: 192 DYV--CTEEEVISLVKDVFNSVAETDVKTGDGLEVYVIKKDGITREEYPLRSD 242


>gi|358253687|dbj|GAA53599.1| 20S proteasome subunit beta 6, partial [Clonorchis sinensis]
          Length = 156

 Score =  112 bits (279), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 52/103 (50%), Positives = 71/103 (68%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V+A++GF  DV  L KLL  R   Y++ H K++S    A LLS TLY +RFFP+Y  ++L
Sbjct: 5   VLATTGFHGDVLTLTKLLENRVKTYRYDHGKEISTNAFAALLSVTLYTRRFFPFYVSSIL 64

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL 119
           GGLD EG+G VY YD VGS+ERV  ++ GS   ++ PFLD++L
Sbjct: 65  GGLDEEGRGAVYRYDPVGSFERVKCAAAGSSGVILQPFLDHRL 107


>gi|444728635|gb|ELW69084.1| Proteasome subunit beta type-1 [Tupaia chinensis]
          Length = 283

 Score =  111 bits (278), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 100/222 (45%), Gaps = 66/222 (29%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFF     
Sbjct: 76  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAVAAMLSTILYSRRFF----- 130

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSP----SPLLL-- 127
                     KG VY++D VGSY+R  + + GS S ++ P LDNQL S      PLLL  
Sbjct: 131 ---------XKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQLNSDLHFGLPLLLTR 181

Query: 128 PAQDAV----------------------------------------------TPLSEAEA 141
           P   ++                                               PLS   A
Sbjct: 182 PGLTSLICPVCFHMHITWSSSLLCLISITPPFTLPLLLSELVGFKNMQNVEHIPLSLDRA 241

Query: 142 VDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           + LVK  F SA ERD+YTGD L I ++ K G+  E + LR+D
Sbjct: 242 MRLVKDVFISAAERDVYTGDALRICIVTKEGVREETVPLRRD 283


>gi|198463833|ref|XP_002135596.1| GA28639 [Drosophila pseudoobscura pseudoobscura]
 gi|198151431|gb|EDY74223.1| GA28639 [Drosophila pseudoobscura pseudoobscura]
          Length = 216

 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 60/167 (35%), Positives = 94/167 (56%), Gaps = 8/167 (4%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V+A++G   D  +L  LL  +   Y++QH+K MS   MAQ+LS   Y +R  PY    +L
Sbjct: 56  VVAATGCGCDAVSLTNLLKVKQQGYENQHHKVMSIESMAQMLSVVQYQRRHLPYNVSPIL 115

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPL 136
           GG+D +G+G V++YD +G + R     +G+   ++ P LDNQ+   S    PA      L
Sbjct: 116 GGIDQDGQGAVFSYDCIGHFVRESSRVEGTAVGILQPVLDNQIGETSE--QPA------L 167

Query: 137 SEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           ++  A+ + K  F +A + D++TGD + I V+ K  I  E M+L KD
Sbjct: 168 TKERALAIAKDAFITAAQSDMFTGDSVIINVITKDSIKVEKMQLGKD 214


>gi|342319050|gb|EGU11002.1| Proteasome subunit beta type [Rhodotorula glutinis ATCC 204091]
          Length = 289

 Score =  110 bits (275), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/172 (37%), Positives = 89/172 (51%), Gaps = 11/172 (6%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           +  +A  GF  D   L K L  R   Y H HN+  S   +A+L+   LY KRFFPYYS+ 
Sbjct: 62  EAAIAVQGFMGDAMNLVKRLKQRLEWYHHTHNEVPSLKSIARLVQTMLYGKRFFPYYSYV 121

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 134
           +L G+D +G G VY++D VGSYER    + GS  +L+ PFLDN +   + +  P+     
Sbjct: 122 ILAGIDRDGTGAVYSFDPVGSYERESCRAYGSAQSLVQPFLDNMVYKKNQVPDPSLPPPV 181

Query: 135 -----PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELR 181
                    AE   L+   F  A ER I  GD L+++V+ K       ME+R
Sbjct: 182 PGQRPEFDLAEVQSLLTDAFTGAAERHIEVGDGLDVLVVEKD------MEMR 227


>gi|195439248|ref|XP_002067543.1| GK16137 [Drosophila willistoni]
 gi|194163628|gb|EDW78529.1| GK16137 [Drosophila willistoni]
          Length = 229

 Score =  109 bits (272), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 92/166 (55%), Gaps = 10/166 (6%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLG 77
           + S G  AD  A+  ++     +YQ  H K++S   +AQ+LS ++Y  RFFPY+  N++ 
Sbjct: 74  IGSVGCFADTLAVVNVIKQNIHMYQLTHLKRISTDALAQMLSISMYSHRFFPYFVSNIVA 133

Query: 78  GLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLS 137
           G+D  GKG V++YD +G +ER  Y + G+G  L++P +D  +K+             PL+
Sbjct: 134 GIDRNGKGAVFSYDPIGHHERKAYDAAGTGFELMIPAMDYFIKNLK----------EPLT 183

Query: 138 EAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              A ++ +     A  +D+YTGD   + ++ K G+  + M LRKD
Sbjct: 184 IEIAAEITRKVMIVADNKDVYTGDSAIMYIITKNGVEAKKMPLRKD 229


>gi|302688009|ref|XP_003033684.1| hypothetical protein SCHCODRAFT_66433 [Schizophyllum commune H4-8]
 gi|300107379|gb|EFI98781.1| hypothetical protein SCHCODRAFT_66433 [Schizophyllum commune H4-8]
          Length = 274

 Score =  108 bits (271), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 61/175 (34%), Positives = 87/175 (49%), Gaps = 20/175 (11%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           +K V+A +GF AD     K L  R   Y H H K M    +A+L+   LY +RFFP+Y +
Sbjct: 61  NKAVLAVTGFAADGNTFVKKLKQRLEWYHHAHAKNMPLQAVARLIQTMLYGRRFFPFYVY 120

Query: 74  NVLGGLDNEG--------------------KGCVYTYDAVGSYERVGYSSQGSGSTLIMP 113
            +LGG++ +G                     G VY++D VGSYER    + G+  +L+ P
Sbjct: 121 IILGGIEEDGTRHRSSRSHTHRPTFFLFPGSGSVYSFDPVGSYERETCRAAGAAQSLLQP 180

Query: 114 FLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVL 168
           FLDNQ+   + +  P       L     + LV   F SATER I  GD LE+ ++
Sbjct: 181 FLDNQIYFKNQIPQPGTTHPAHLPLPHVLSLVIDSFTSATERHIEVGDGLEVYIV 235


>gi|238578402|ref|XP_002388706.1| hypothetical protein MPER_12245 [Moniliophthora perniciosa FA553]
 gi|215450229|gb|EEB89636.1| hypothetical protein MPER_12245 [Moniliophthora perniciosa FA553]
          Length = 165

 Score =  106 bits (265), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 48/105 (45%), Positives = 67/105 (63%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+A +GF AD     K +  R   Y+H H K M    +A+L+   LY +RFFPYY +
Sbjct: 61  DKAVLAVNGFAADGNMFVKKVRQRLEWYRHAHAKDMPLRAIARLIQTMLYARRFFPYYVY 120

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ 118
           N+LGG++ +G G VY++D VGSYER    + G+  +L+ PFLDNQ
Sbjct: 121 NILGGIEEDGSGAVYSFDPVGSYERESCRAAGAAQSLVQPFLDNQ 165


>gi|225712140|gb|ACO11916.1| Proteasome subunit beta type-1-A [Lepeophtheirus salmonis]
          Length = 238

 Score =  106 bits (264), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 96/171 (56%), Gaps = 7/171 (4%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           +    +++GF  D+  + ++L  +  ++  Q  K+M    +A  L N LY KRFFP+Y F
Sbjct: 74  NSITFSATGFFGDIYRVFEILKHKQELFYQQFEKEMLVSELAHFLMNVLYSKRFFPFYGF 133

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            VLGG++N G+  +Y+YD VGSY++      G+G  ++ P LD+++   + L    +   
Sbjct: 134 IVLGGIEN-GECAMYSYDPVGSYQKDTARCYGTGMKIVQPILDSKIYRKNNLKKEEEFKE 192

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK-GGIHREYMELRKD 183
             +     + +VK  F S +ERD+ TGD +EIV++ K G      ++LR+D
Sbjct: 193 EEI-----IAIVKKAFESVSERDVKTGDGVEIVIIRKDGSTDSNIIKLRRD 238


>gi|330038504|ref|XP_003239615.1| 26S proteasome SU B6 [Cryptomonas paramecium]
 gi|327206539|gb|AEA38717.1| 26S proteasome SU B6 [Cryptomonas paramecium]
          Length = 245

 Score =  104 bits (259), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 91/169 (53%), Gaps = 4/169 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           ++K ++AS+G  AD    QK        Y++   K +S    A  +S+ LY KRFFPYY 
Sbjct: 79  SEKIILASAGMFADAFFFQKKTKTSIKDYEYGIKKAISVESCAFYISSLLYSKRFFPYYV 138

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FNVL GLD   KG VY++D+VGS+E++ ++  G     I P LD+  +      L  +  
Sbjct: 139 FNVLSGLDENDKGSVYSFDSVGSFEKLKFNCIGESCAAIQPLLDSYFEHQ----LKLKFN 194

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELR 181
           +   S  + ++ +K  F  A++R I  GD L+  ++NK GI  E   LR
Sbjct: 195 LRTKSIQDLINSIKEFFLKASKRKIDIGDGLQFFIINKKGIINENYLLR 243


>gi|149549948|ref|XP_001513174.1| PREDICTED: proteasome subunit beta type-1-like, partial
           [Ornithorhynchus anatinus]
          Length = 261

 Score =  103 bits (258), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 45/104 (43%), Positives = 68/104 (65%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+ V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 38  DRTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVY 97

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDN 117
           N++GGLD EGKG VY+ + +GSY +  Y + G+ +T++ P   N
Sbjct: 98  NIIGGLDEEGKGAVYSLNPIGSYLKDNYKAGGTTNTMLQPLTAN 141


>gi|401827105|ref|XP_003887645.1| proteasome subunit beta type-1 [Encephalitozoon hellem ATCC 50504]
 gi|392998651|gb|AFM98664.1| proteasome subunit beta type-1 [Encephalitozoon hellem ATCC 50504]
          Length = 290

 Score =  103 bits (257), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 63/166 (37%), Positives = 91/166 (54%), Gaps = 7/166 (4%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLG 77
           +  +GF AD  + +  +   + I Q++ +  ++    A LLS  LY +RFFPYYS+  L 
Sbjct: 132 LTGTGFYAD--SHEVYVKMEYEIRQYEVDGPINIHSAANLLSKILYSRRFFPYYSYCTLS 189

Query: 78  GLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLS 137
           G DN GK  +Y YD VGS+E V     GSG ++I P LD+ +   +          T LS
Sbjct: 190 GFDN-GKPYIYAYDPVGSFESVTCECNGSGRSMIQPLLDSFIDKKNW----HNAEQTQLS 244

Query: 138 EAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           + + V L+   FASA ERDI T D LEI VL +  +  + + LR+D
Sbjct: 245 QEDCVRLIAKAFASAAERDIKTKDNLEIYVLRENKVVHKVLPLRRD 290


>gi|169806330|ref|XP_001827910.1| 20S proteasome core particle subunit beta 6 [Enterocytozoon
           bieneusi H348]
 gi|161779358|gb|EDQ31381.1| 20S proteasome core particle subunit beta 6 [Enterocytozoon
           bieneusi H348]
          Length = 276

 Score =  102 bits (253), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 92/166 (55%), Gaps = 9/166 (5%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLG 77
           + + GF AD   +   L   + + Q++   +M+   +A+ L + LY  RFFP YS+  L 
Sbjct: 120 LTTVGFHADSHKIA--LTLDYQLKQYEQYDKMTLSALAEFLHHVLYNNRFFPLYSYCCLC 177

Query: 78  GLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLS 137
           G +N G+  +Y+YD +GSY++      GSG+ +I P  D+ +   +       +  + +S
Sbjct: 178 GFEN-GEATIYSYDCIGSYQKTECRVNGSGTAMIQPLFDSWISGKNF------ENYSQIS 230

Query: 138 EAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             +A+ LVK  F SA E D+ TGD LEI +L+   + +E ++LRKD
Sbjct: 231 FEDALCLVKKAFHSAAEADVKTGDYLEIYILDNNKVEKEVIDLRKD 276


>gi|378754633|gb|EHY64663.1| hypothetical protein NERG_02282 [Nematocida sp. 1 ERTm2]
          Length = 242

 Score =  101 bits (252), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 2/173 (1%)

Query: 11  CRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPY 70
           C   + +++++GF AD + +   LA     YQ ++NK+M+    A LL   LY  RFFP 
Sbjct: 72  CLDGRFILSTTGFYADSRYIFSKLAYEIDKYQFKYNKKMAIEQAAALLHVLLYTHRFFPK 131

Query: 71  YSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQ 130
           +++  L G +   +  +++YD VGSY+       GSG+ L+ P LD+ +   +      +
Sbjct: 132 FTYCCLVGFNENNEPKIFSYDPVGSYQETPCRCNGSGTALLQPMLDSWITRKNWYCEEGK 191

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           + V   +E E + LVK  F S  E D+ TGD LE+ V+ K  I R    LR D
Sbjct: 192 NYV--CTEEEVISLVKDVFNSVAETDVKTGDGLEVYVIKKDQIVRSEYPLRSD 242


>gi|19074564|ref|NP_586070.1| 20S PROTEASOME ALPHA-TYPE SUBUNIT [Encephalitozoon cuniculi GB-M1]
 gi|74630117|sp|Q8SRH6.1|PSB6_ENCCU RecName: Full=Probable proteasome subunit beta type-6; AltName:
           Full=26S proteasome beta-type subunit PRE7; AltName:
           Full=Multicatalytic endopeptidase complex subunit PRE7
 gi|19069206|emb|CAD25674.1| 20S PROTEASOME ALPHA-TYPE SUBUNIT [Encephalitozoon cuniculi GB-M1]
          Length = 290

 Score =  101 bits (251), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/167 (37%), Positives = 94/167 (56%), Gaps = 7/167 (4%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           ++  +GF AD   +   +   + I Q++ +  ++    A LLS  LY KRFFPYYSF VL
Sbjct: 131 LLTGTGFYADTHEVYVKMV--YEIRQYEVDDSINIHSAANLLSKILYSKRFFPYYSFCVL 188

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPL 136
            G + +GK  VY+YD +GS+  V     GSG ++I P LD+ +   +     A++  T L
Sbjct: 189 SGFE-KGKPYVYSYDPIGSFGSVTCVCSGSGRSMIQPLLDSFIDKKN--WNNAEE--TQL 243

Query: 137 SEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           S+ + + LV   F SA ERD+ T D LE+ V+ +  + RE   LR+D
Sbjct: 244 SQEDCIRLVVKAFNSAAERDVKTKDNLEVCVMRENQVMRETFPLRRD 290


>gi|449329565|gb|AGE95836.1| 20S proteasome alpha-type subunit [Encephalitozoon cuniculi]
          Length = 290

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/167 (37%), Positives = 94/167 (56%), Gaps = 7/167 (4%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           ++  +GF AD   +   +   + I Q++ +  ++    A LLS  LY KRFFPYYSF VL
Sbjct: 131 LLTGTGFYADTHEVYVKMV--YEIRQYEVDDSINIHSAASLLSKILYSKRFFPYYSFCVL 188

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPL 136
            G + +GK  VY+YD +GS+  V     GSG ++I P LD+ +   +     A++  T L
Sbjct: 189 SGFE-KGKPYVYSYDPIGSFGSVTCVCSGSGRSMIQPLLDSFIDKKN--WNNAEE--TQL 243

Query: 137 SEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           S+ + + LV   F SA ERD+ T D LE+ V+ +  + RE   LR+D
Sbjct: 244 SQEDCIRLVVKAFNSAAERDVKTKDNLEVCVMRENQVMRETFPLRRD 290


>gi|396081771|gb|AFN83386.1| 20S proteasome subunit beta type-1 [Encephalitozoon romaleae
           SJ-2008]
          Length = 289

 Score = 99.8 bits (247), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/166 (36%), Positives = 90/166 (54%), Gaps = 7/166 (4%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLG 77
           +  +GF AD   +   +A  + I Q++    ++    A LLS  LY KRFFPYYS+ VL 
Sbjct: 131 LTGTGFYADSHEVYVKMA--YEIRQYEVEGSINVHSAANLLSKILYSKRFFPYYSYCVLS 188

Query: 78  GLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLS 137
           G +N G+  VY+YD VGS+E V     GSG ++I P LD+ +   +            LS
Sbjct: 189 GFEN-GRPYVYSYDPVGSFESVTCICNGSGRSMIQPLLDSFVSKKN----WNNAGQAQLS 243

Query: 138 EAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           + + V L+   F +A ERD+ T D LE+ V+ +  + R+   LR+D
Sbjct: 244 QEDCVRLITKAFNAAAERDVKTKDNLEVYVVRENEVERKVFPLRRD 289


>gi|160331789|ref|XP_001712601.1| prsB6 [Hemiselmis andersenii]
 gi|159766050|gb|ABW98276.1| prsB6 [Hemiselmis andersenii]
          Length = 251

 Score = 99.0 bits (245), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 58/171 (33%), Positives = 93/171 (54%), Gaps = 5/171 (2%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           +   ++AS+G  +D+  LQ L+      ++ ++ ++      A  LS  LY KRFFPYYS
Sbjct: 86  SSNIILASAGMYSDIFFLQNLIQIGIKKFKTENLEKCLISSCAFYLSYILYSKRFFPYYS 145

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           FN+L GL+   +G ++ +DA+GS+E+   S  G+G + I P LD   +  S  LL  +D 
Sbjct: 146 FNLLAGLEKNREGSIFCFDAIGSFEKTSISCVGNGQSQIQPILDGIFQKKS--LLVKKDF 203

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            T LS     + +K  F    +R+I  GD L++ ++ K GI  E   L+ D
Sbjct: 204 QTLLS---VKNCIKGIFLKVAQRNISIGDGLQMFIVTKKGIFIENHFLKLD 251


>gi|219123814|ref|XP_002182212.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217406173|gb|EEC46113.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 231

 Score = 99.0 bits (245), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 88/160 (55%), Gaps = 17/160 (10%)

Query: 18  MASSGFQADVKALQKLLAA--RHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNV 75
           + SSG  AD + L++ + A  R   Y  + + Q +   +A LL   LY +R FP+YSF V
Sbjct: 75  VGSSGCNADCEMLKRTVRADTRAAFYHGESDIQTAA--VATLLGQMLYSRRGFPFYSFCV 132

Query: 76  LGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKS------------PS 123
           +GG++N G G VY YDA+GSYE+VG ++ G+G  L+ P LD   +S            P 
Sbjct: 133 VGGMEN-GAGKVYVYDAIGSYEQVGVATSGTGRELLQPILDRSFRSREVFRSTIESELPK 191

Query: 124 PLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKL 163
            ++LP        S+ EA+  +   + S +ERDI  GD++
Sbjct: 192 QVMLPVAPRQVDCSKDEAISKLVDGYRSVSERDIGVGDRV 231


>gi|429965201|gb|ELA47198.1| hypothetical protein VCUG_01298 [Vavraia culicis 'floridensis']
          Length = 242

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/173 (36%), Positives = 94/173 (54%), Gaps = 9/173 (5%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRF-FPYYS 72
           D  V + +GF AD+  +   L      Y+++  +++S   +A  L N LY +R    YY 
Sbjct: 76  DGFVFSGTGFYADLNEVYFRLRYEVEKYENEIERRISIRALAHKLLNILYSRRRGLIYYV 135

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           F VL G D  G   +Y++D +GSYE+      GS S +I P LD      S ++   Q+ 
Sbjct: 136 FCVLIGKDETGDPVLYSFDPIGSYEQTMCRCYGSASPMIQPLLD------STIMKHNQEN 189

Query: 133 VT--PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           V+   LS  E+V+L K  F +A ERD+ TGD L+IVV  K G+  E ++LRKD
Sbjct: 190 VSYQSLSVEESVELTKKAFFAAAERDVNTGDYLQIVVYKKDGMTEELVDLRKD 242


>gi|393228712|gb|EJD36350.1| N-terminal nucleophile aminohydrolase [Auricularia delicata
           TFB-10046 SS5]
          Length = 193

 Score = 98.2 bits (243), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 87/171 (50%), Gaps = 23/171 (13%)

Query: 7   ILTSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKR 66
           IL +   DK V+A +G  AD     K +  R   Y+H H+K M    +A+++   LY   
Sbjct: 4   ILNANLTDKAVLAVNGLAADGNMFVKKVKQRLEWYRHAHSKDMPLQSIARMIQTMLYV-- 61

Query: 67  FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL-----KS 121
                 +N+LGG+D +G G VY++D VGSYER    + G+  +L+ PFLDNQ+     + 
Sbjct: 62  ------YNILGGIDEQGVGAVYSFDPVGSYERETCRAAGAAQSLVQPFLDNQIYFKNQQG 115

Query: 122 PSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEI-VVLNKG 171
             P  LP    ++         LV   F   TER I  GD L++ V+L +G
Sbjct: 116 DHPAHLPLDHVLS---------LVTDAFTGTTERHIEVGDGLQMFVILARG 157


>gi|440491899|gb|ELQ74504.1| 20S proteasome, regulatory subunit beta type PSMB1/PRE7
           [Trachipleistophora hominis]
          Length = 243

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/173 (35%), Positives = 95/173 (54%), Gaps = 9/173 (5%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRF-FPYYS 72
           D  + + +GF AD+  +   L      Y+++  K++    +A  L N LY +R    YY 
Sbjct: 77  DGFIFSGTGFYADLNEVYFRLRYEVERYENEVEKRIGISALAHKLLNILYSRRGGLIYYV 136

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           F+VL G D  G+  +Y++D +GSYE+V     GS S +I P LD      S ++   Q+ 
Sbjct: 137 FSVLVGKDETGEPVLYSFDPIGSYEQVMCKCYGSASPMIQPLLD------STIMKYNQEN 190

Query: 133 VT--PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            +   L   E+V+L K  F +A ERD+ TGD L+IVV  + G++ E ++LRKD
Sbjct: 191 ASYQSLCMEESVELTKKAFFAAAERDVNTGDYLQIVVYKRDGVNEELVDLRKD 243


>gi|429962010|gb|ELA41554.1| hypothetical protein VICG_01418 [Vittaforma corneae ATCC 50505]
          Length = 275

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/166 (38%), Positives = 96/166 (57%), Gaps = 9/166 (5%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLG 77
           +A++GF AD  + +      + + Q++   +++   +A LL N LY KRFFPYYS+ +L 
Sbjct: 119 LATTGFFAD--SFEVYTNLMYQVKQYETYSRITLKALAHLLHNLLYSKRFFPYYSYAILC 176

Query: 78  GLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLS 137
           G DN G   VY+YD VGSY++      GS S +I P LD+ +   +      +D   P S
Sbjct: 177 GFDN-GTATVYSYDPVGSYDKTRCRCNGSSSVMIQPLLDSWIMGKN-----FKDFKEP-S 229

Query: 138 EAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            +E ++LVK  F +A+ERD+ T D LEI V+ K  +  E + LRKD
Sbjct: 230 FSETLELVKKAFDAASERDVKTKDYLEIYVIEKDSMSHELIPLRKD 275


>gi|213401303|ref|XP_002171424.1| proteasome component C5 [Schizosaccharomyces japonicus yFS275]
 gi|211999471|gb|EEB05131.1| proteasome component C5 [Schizosaccharomyces japonicus yFS275]
          Length = 193

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 49/142 (34%), Positives = 81/142 (57%), Gaps = 6/142 (4%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            DK ++ ++GF+AD   L K +  R  +Y   H + MS    ++++   LY KRFFPYY 
Sbjct: 51  GDKLILGATGFEADALTLVKRIRQRIDLYHDNHKRIMSPSSCSRMVQTMLYGKRFFPYYV 110

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           + ++ GLD +G G +Y++D VGSYER    + GS +  ++ FLDNQ+   +   +P  + 
Sbjct: 111 YTLVAGLDEKGVGALYSFDPVGSYEREWCRAAGSAANFMLSFLDNQVNLHNQ-YVPTSNG 169

Query: 133 VTP-----LSEAEAVDLVKTCF 149
                   L+  +AV+L++ CF
Sbjct: 170 TEKMPHRLLTLTQAVNLLQDCF 191


>gi|226471338|emb|CAX70750.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
           japonicum]
          Length = 178

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/129 (40%), Positives = 78/129 (60%), Gaps = 6/129 (4%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V+  +GF  DV  L KLL  +   Y++ H K +S   +A LLS +LY +RFFP+Y  N+L
Sbjct: 52  VLGCAGFHGDVLTLTKLLENKVKTYRYDHGKDISTKALAGLLSVSLYNRRFFPFYVSNIL 111

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPL 136
            GLD + +G +Y+YD VGSYE  GY + GS + ++ PFLD+ + +      P +  V+ L
Sbjct: 112 VGLDGD-RGVLYSYDPVGSYEAEGYRASGSSAAILQPFLDSTVGNK-----PPKYHVSRL 165

Query: 137 SEAEAVDLV 145
           ++  AV L 
Sbjct: 166 NKEAAVKLT 174


>gi|303390057|ref|XP_003073260.1| 20S proteasome subunit beta type-1 [Encephalitozoon intestinalis
           ATCC 50506]
 gi|303302405|gb|ADM11900.1| 20S proteasome subunit beta type-1 [Encephalitozoon intestinalis
           ATCC 50506]
          Length = 287

 Score = 96.3 bits (238), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 61/172 (35%), Positives = 92/172 (53%), Gaps = 7/172 (4%)

Query: 12  RADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYY 71
           R    ++  +GF AD   + + +     I Q++ +  MS    A LLS  LY +RFFPYY
Sbjct: 123 RMGNFLLTGTGFYADTYEVYRKMTDE--ILQYEVDGPMSIHSSANLLSKILYSRRFFPYY 180

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
           SF  L G + +GK  +Y YD +GSY+      +GSG ++I P LD+ +   +     A D
Sbjct: 181 SFCTLSGFE-KGKAYLYQYDPLGSYDLTTCVCKGSGRSMIQPLLDSFIDKKN--WNNASD 237

Query: 132 AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           A   +S+ + + LV   F S  ERDI T D LEI V+ +  +  + + LR+D
Sbjct: 238 A--QISQEDCIRLVVKAFNSVAERDIKTKDNLEIYVVREHELTHQILPLRRD 287


>gi|340507845|gb|EGR33723.1| proteasome subunit beta type 1, putative [Ichthyophthirius
           multifiliis]
          Length = 203

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 54/122 (44%), Positives = 71/122 (58%), Gaps = 16/122 (13%)

Query: 11  CR-ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKR--- 66
           C+ +D   +A+SG  AD  AL K L +R  +YQ+ + KQ S   ++ LLS TLYYKR   
Sbjct: 77  CKLSDNVYLATSGMYADFVALSKQLQSRLQMYQYNNQKQASMKAISTLLSRTLYYKRYIY 136

Query: 67  ------------FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPF 114
                       FFPYY+FN+L G DN+G G V  YDAVGS +   Y+  GSG+ LI+P 
Sbjct: 137 FIINFINKYIYRFFPYYTFNLLAGFDNQGNGQVIGYDAVGSGDFKQYAVLGSGAQLIVPI 196

Query: 115 LD 116
            D
Sbjct: 197 FD 198


>gi|312375789|gb|EFR23090.1| hypothetical protein AND_13702 [Anopheles darlingi]
          Length = 219

 Score = 95.5 bits (236), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 44/92 (47%), Positives = 59/92 (64%)

Query: 28  KALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 87
           + L  ++  R  +Y+ QH K+MS P +AQ+LS  +Y +RFFPYY  NVL GLD  GKG V
Sbjct: 24  RLLGSIVGVRMQMYKDQHQKEMSTPAVAQMLSILMYNRRFFPYYVSNVLAGLDLNGKGVV 83

Query: 88  YTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL 119
           Y+YD +G  E   Y + GS   L+ P LDNQ+
Sbjct: 84  YSYDPIGHCEMTTYRAGGSAGPLLQPVLDNQI 115


>gi|10121721|gb|AAG13340.1|AF266220_1 proteasome subunit beta type 1 [Gillichthys mirabilis]
          Length = 181

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 48/109 (44%), Positives = 66/109 (60%), Gaps = 2/109 (1%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            D  V+  SGF  D   L K++ AR  +Y+H +NK M+C  +A +LS  LY +RFFPYY 
Sbjct: 59  TDTTVIGCSGFHGDCLTLTKIIDARLKMYKHSNNKMMTCGAIAAMLSTILYGRRFFPYYV 118

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKS 121
           +N++GGLD EGKG   T   VGSY+R     + S   ++ P LD +L S
Sbjct: 119 YNIIGGLDEEGKG-ASTALPVGSYQRDPTGWKIS-HCMLPPLLDTRLVS 165


>gi|300702270|ref|XP_002995154.1| hypothetical protein NCER_102070 [Nosema ceranae BRL01]
 gi|239604000|gb|EEQ81483.1| hypothetical protein NCER_102070 [Nosema ceranae BRL01]
          Length = 282

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 93/164 (56%), Gaps = 10/164 (6%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +GF AD   L  +L  + L+Y+  +  ++S   +A L S  +Y KR FPYYS+  L G  
Sbjct: 128 TGFYADGIELINILKYQVLLYESFN--KISIHSLANLASKVMYSKRLFPYYSYVTLSGF- 184

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
            +G+  VY++D +G +E+V     GSG++ I P LD+ ++  + +        +P+ + E
Sbjct: 185 CDGEPFVYSFDCLGHFEKVSTVCNGSGASFIQPLLDSLIEKKNWI------GESPVVDEE 238

Query: 141 -AVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
               +V+  F +A+ERD+ TGD LE+ V+ + G  +   +LR+D
Sbjct: 239 YTKSVVRKAFDAASERDVKTGDYLEMYVVRENGAVKSVEKLRQD 282


>gi|162606130|ref|XP_001713580.1| 26S proteasome SU B6 [Guillardia theta]
 gi|13794500|gb|AAK39875.1|AF165818_83 26S proteasome SU B6 [Guillardia theta]
          Length = 239

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 98/174 (56%), Gaps = 12/174 (6%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           ++ C++ SSG  +D+  L + L       ++ +N +++  G+  L S+ LY +RFFP+Y+
Sbjct: 75  SNLCLLGSSGMISDINILHQKLRNEIFRLKYLNNTELNLNGIVYLTSSLLYSRRFFPFYT 134

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQG---SGSTLIMPFLDNQLKSPSPLLLPA 129
           FN+L G++  GK   YTYDA+GS++    S+ G   S +  IM +++ + K P+      
Sbjct: 135 FNILTGINELGKASNYTYDAIGSFDCNHASTVGNCQSSAQCIMDYIEER-KIPND----- 188

Query: 130 QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           ++  T L   + V L+K  F++   + +  GD L++ +++K GI  E   LR D
Sbjct: 189 RNYKTIL---QVVSLIKIIFSTLCNKQVDMGDILQLFIVSKKGILVENSILRLD 239


>gi|62318933|dbj|BAD94023.1| proteasome component C5 [Arabidopsis thaliana]
          Length = 56

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 43/56 (76%), Positives = 47/56 (83%)

Query: 128 PAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           P QD+ TPLSEAEAVDLVKT FASATERDIYTGDKLEI++L   GI  E M+LRKD
Sbjct: 1   PKQDSNTPLSEAEAVDLVKTVFASATERDIYTGDKLEIMILKADGIKTELMDLRKD 56


>gi|224007805|ref|XP_002292862.1| 26S proteasome subunit beta type 1-like protein [Thalassiosira
           pseudonana CCMP1335]
 gi|220971724|gb|EED90058.1| 26S proteasome subunit beta type 1-like protein [Thalassiosira
           pseudonana CCMP1335]
          Length = 219

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 90/169 (53%), Gaps = 18/169 (10%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHN---KQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           ++ S+G  +D ++L++ +  R  +   + N    +M    +A LL   LY +R FP+YSF
Sbjct: 52  MIGSAGCASDCESLKRRV--RLELDSLECNFPSGKMGVQSVANLLQQVLYGRRGFPFYSF 109

Query: 74  NVLGGLDNE--------GKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLD--NQLKSPS 123
            V+ G+D +        G G VY YDA+GS+ERV   S G+G  L+ P LD    +K  +
Sbjct: 110 CVVAGIDRDEQTGDSKCGMGAVYVYDAIGSFERVAVGSAGTGRELLQPILDRMGSIKQNN 169

Query: 124 PLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
            ++   QD +   +  EAV+ V   + S  ER+I  GD++ I V+   G
Sbjct: 170 NVI---QDGLAQCTWEEAVNNVARAYQSVAEREISVGDEVVICVVKASG 215


>gi|341582772|ref|YP_004763264.1| proteasome subunit beta 2 [Thermococcus sp. 4557]
 gi|340810430|gb|AEK73587.1| proteasome subunit beta 2 [Thermococcus sp. 4557]
          Length = 200

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 16/170 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+  + ++G   DV+AL ++L A    YQ   N+ M+   MA LLSN L   ++FPY   
Sbjct: 46  DRIAITTAGSVGDVQALARMLEAEARYYQFTWNRPMTTRAMANLLSNILNENKWFPYLVQ 105

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++GG  +E    +   DA+G      Y++ GSGS   +  L++  K             
Sbjct: 106 IIIGGYVDE--PTLANLDAMGGLVFDDYTATGSGSPFAIAVLEDGFKK------------ 151

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGD-KLEIVVLNKGGIHREYMELRK 182
             +S  EA +L      +A +RD+YTGD K+++VV+ K G+  E++E ++
Sbjct: 152 -DMSVEEAKELAVRAVRTAGKRDVYTGDRKVQVVVITKDGMKEEFVEFKE 200


>gi|195064491|ref|XP_001996575.1| GH21877 [Drosophila grimshawi]
 gi|193895395|gb|EDV94261.1| GH21877 [Drosophila grimshawi]
          Length = 223

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 12/169 (7%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           + VM   G   DV ++  L+  R  + +  +  ++    +A ++S+T+  +R FP+ +  
Sbjct: 65  QSVMGCIGSWVDVASMNALIKRRGQMRELDNRSKLPTEILASIISSTINSRRLFPWRTST 124

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPS--PLLLPAQDA 132
           +L GLD  GKG VY Y+ VG   R  YS  GS   ++ P L++ +  P   PL       
Sbjct: 125 ILAGLDVMGKGAVYQYNDVGQRGRFLYSVLGSARNIMWPQLNHVIGKPQHYPL------- 177

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELR 181
              L++  A DLV+ CF  A+      GD   I ++ K  I  + ++LR
Sbjct: 178 ---LTKERAFDLVRDCFMDASRVHTVIGDTALIKIITKDLIEEQSLKLR 223


>gi|195046971|ref|XP_001992246.1| GH24307 [Drosophila grimshawi]
 gi|193893087|gb|EDV91953.1| GH24307 [Drosophila grimshawi]
          Length = 285

 Score = 84.3 bits (207), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 82/167 (49%), Gaps = 1/167 (0%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           + ++ S G   DV A+  L+  R  +Y+  + K +S   +A ++S  +Y +R FP     
Sbjct: 120 QSIIGSIGNWGDVVAMTALIRRRVQVYEQDNKKTISTEALASMISTLMYNRRLFPCLMIT 179

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 134
           +L GLDNEGKG V+ +D +G+ ER  Y   G    +++  L + +      ++P+ D   
Sbjct: 180 ILAGLDNEGKGAVFHFDEIGNRERCRYLIIGGARDIMLAKLRHSIGEIDSGIIPS-DQYQ 238

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELR 181
            L++  A  + + CF  A+      G+ + I  +   G     ++LR
Sbjct: 239 QLTKERAFGIARDCFIHASHLRADIGNTVMIKTIYTKGSQETILKLR 285


>gi|195022115|ref|XP_001985520.1| GH17107 [Drosophila grimshawi]
 gi|193899002|gb|EDV97868.1| GH17107 [Drosophila grimshawi]
          Length = 254

 Score = 84.3 bits (207), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 12/169 (7%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           + VM   G   DV ++  L+  R  + +  +  ++    +A ++S T+  +R FP+ +  
Sbjct: 96  QSVMGCIGSWVDVASMNALIKRRGQMRELDNRSKLPTEILASIISGTINSRRLFPWRTST 155

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPS--PLLLPAQDA 132
           +L GLD  GKG VY Y+ VG   R  YS  GS   ++ P L++ +  P   PL       
Sbjct: 156 ILAGLDVMGKGAVYQYNDVGQRGRFLYSVLGSARNIMWPQLNHVIGKPQHYPL------- 208

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELR 181
              L++  A DLV+ CF  A+      GD   I ++ K  I  + ++LR
Sbjct: 209 ---LTKERAFDLVRDCFMDASRVHTVIGDTALIKIITKDLIEEQSLKLR 254


>gi|119719309|ref|YP_919804.1| proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
 gi|302595733|sp|A1RX71.1|PSB2_THEPD RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|119524429|gb|ABL77801.1| Proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
          Length = 204

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 84/159 (52%), Gaps = 14/159 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  MAS+G  AD++ L +++ A   +Y+   N       +A+LLS  LY +R FPYY+ 
Sbjct: 44  DKMGMASAGLMADMQTLARIVEAEMRLYELDSNISPKVWTVAKLLSYILYERRLFPYYAE 103

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            V+GGLD EG   +Y+ D +G+     Y + GSG+ L +  +++  K             
Sbjct: 104 IVVGGLDEEGS-HLYSLDPIGAIIEDDYVALGSGTQLAISIVESNYKK------------ 150

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
             +S  EA+ L      +A +RD  +GD ++++V+ K G
Sbjct: 151 -DMSLDEALSLALKSVYAAMKRDAASGDGVDVLVIGKSG 188


>gi|197129777|gb|ACH46275.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
          Length = 149

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 35/75 (46%), Positives = 51/75 (68%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           ++ V+  +GF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 73  ERTVIGCTGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVY 132

Query: 74  NVLGGLDNEGKGCVY 88
           N++GGLD EGKG VY
Sbjct: 133 NIIGGLDEEGKGAVY 147


>gi|390961463|ref|YP_006425297.1| proteasome subunit beta 2 [Thermococcus sp. CL1]
 gi|390519771|gb|AFL95503.1| proteasome subunit beta 2 [Thermococcus sp. CL1]
          Length = 200

 Score = 83.2 bits (204), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 16/170 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+  + ++G   DV+AL ++L A    YQ   N+ MS   MA LLSN L   ++FPY   
Sbjct: 46  DRIAITTAGSVGDVQALARMLEAEARYYQFTWNRPMSTKAMANLLSNILNENKWFPYLVQ 105

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++GG   E    +   D +G      Y++ GSGS   +  L++  K             
Sbjct: 106 IIIGGYVEE--PTLANLDPMGGLIFDDYTATGSGSPFAIAVLEDGFKK------------ 151

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGD-KLEIVVLNKGGIHREYMELRK 182
             +S  EA +L      +A +RD+YTG  K+++VV+ K G+  E++E ++
Sbjct: 152 -DMSVKEARELAIRAVRTAGKRDVYTGSRKVQVVVITKDGMKEEFVEFKE 200


>gi|171185380|ref|YP_001794299.1| proteasome endopeptidase complex protein [Pyrobaculum neutrophilum
           V24Sta]
 gi|302595731|sp|B1YDJ0.1|PSB2_THENV RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|170934592|gb|ACB39853.1| Proteasome endopeptidase complex [Pyrobaculum neutrophilum V24Sta]
          Length = 203

 Score = 82.4 bits (202), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 93/183 (50%), Gaps = 20/183 (10%)

Query: 5   FYILTSCRA------DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLL 58
           FY L++         DK  +AS+G  AD++AL K+L      Y+ +  K+ +   MA+LL
Sbjct: 32  FYTLSTAGKKVFIVNDKLAIASAGIIADMQALAKILKLNARSYELEVKKKPTVKAMAKLL 91

Query: 59  SNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ 118
           S  ++ +RF P+Y+  ++GG+D EG   +   D +GS     Y++ G+G+ L +  LD  
Sbjct: 92  SVVMFSRRFMPFYAEVLVGGVDEEGPHLI-VMDPLGSLIEDNYAALGTGAKLAVSLLDAS 150

Query: 119 LKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYM 178
            +               ++  EA  L      +A ERD  +G  +++VV++ GG   E +
Sbjct: 151 YRP-------------DMTVEEAKKLAVQAVKAAIERDPVSGGGIDLVVVDGGGAREEEV 197

Query: 179 ELR 181
           +++
Sbjct: 198 KVQ 200


>gi|57642142|ref|YP_184620.1| proteasome subunit beta 2 [Thermococcus kodakarensis KOD1]
 gi|74505318|sp|Q5JHL8.1|PSB2_PYRKO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|57160466|dbj|BAD86396.1| proteasome, beta subunit 2 [Thermococcus kodakarensis KOD1]
          Length = 199

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 86/170 (50%), Gaps = 16/170 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+  + ++G   DV+AL ++L A    YQ    + M+   MA LLSN L   ++FPY   
Sbjct: 45  DRIAITTAGSVGDVQALARMLEAEARYYQFTWGRPMTAKAMAHLLSNILNENKWFPYMVQ 104

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++GG   E    +   D +G      Y++ GSGS   +  L++  +             
Sbjct: 105 IIIGGYVEE--PTLANLDPLGGLIFDDYTATGSGSPFAIAVLEDGFRK------------ 150

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGD-KLEIVVLNKGGIHREYMELRK 182
             +S  EA +L      +A +RD+YTGD K+++VV++K G+  E++E ++
Sbjct: 151 -DMSLEEAKELAVRAVRTAGKRDVYTGDRKVQVVVISKDGMKEEFVEFKE 199


>gi|374326224|ref|YP_005084424.1| proteasome subunit beta [Pyrobaculum sp. 1860]
 gi|356641493|gb|AET32172.1| proteasome, beta subunit [Pyrobaculum sp. 1860]
          Length = 203

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 92/183 (50%), Gaps = 20/183 (10%)

Query: 5   FYILTSCRA------DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLL 58
           FY L+S         DK  +AS+G  AD++AL K+L      Y+ +  K+ S   MA+LL
Sbjct: 32  FYTLSSSGKKVFVVDDKLAIASAGIIADMQALAKILKLNAKSYELEMKKKPSVHAMAKLL 91

Query: 59  SNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ 118
           S  ++ +RF P+++  ++GG+D EG   +   D +GS     Y++ G+G+ L    LD  
Sbjct: 92  SVVMFSRRFMPFFAEVLVGGVDEEGPHLI-VMDPLGSLIEDNYAALGTGAKLAAAVLDGN 150

Query: 119 LKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYM 178
            ++              +S  EA  L      +A ERD  +G  +++VV+++ G   E +
Sbjct: 151 YRN-------------DMSIEEAKKLAVQALKAAIERDPVSGGGIDLVVVDEKGAREEEV 197

Query: 179 ELR 181
            ++
Sbjct: 198 RVQ 200


>gi|126460611|ref|YP_001056889.1| proteasome endopeptidase complex protein [Pyrobaculum calidifontis
           JCM 11548]
 gi|302595828|sp|A3MXQ6.1|PSB2_PYRCJ RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|126250332|gb|ABO09423.1| Proteasome endopeptidase complex [Pyrobaculum calidifontis JCM
           11548]
          Length = 203

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 88/168 (52%), Gaps = 14/168 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+  +AS+G  AD++ L K+L      Y+ +  ++ S   MA+LLS  ++ +RF P+++ 
Sbjct: 47  DRLAIASAGIIADMQTLAKILKLNAKAYELEMKRKPSVHAMAKLLSVVMFSRRFMPFFAE 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++GG+D+EG   +   D +GS     Y++ G+G+ L +  +D   K    L    QDA 
Sbjct: 107 VLVGGIDDEGPHLI-VMDPLGSLIEDNYAALGTGAKLAIAIIDASYKPDMSL----QDAK 161

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELR 181
                     L      +A ERD  +G  +++VV++K G   E ++L+
Sbjct: 162 K---------LAVQALKAALERDPVSGGGIDLVVIDKNGAREEEVKLQ 200


>gi|350525853|ref|YP_002582771.2| proteasome subunit beta [Thermococcus sp. AM4]
 gi|345650672|gb|EEB74119.2| Proteasome subunit beta [Thermococcus sp. AM4]
          Length = 194

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 16/163 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   +A +G   D+ +L +LL A   +Y+ +  ++MS   MA L+SN L+  R+ PY+++
Sbjct: 42  DHLAIAGAGLVGDILSLVRLLRAEAKLYRARVGREMSVKAMATLVSNVLHGSRYLPYFAW 101

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++GG D   +  +Y+ DA G      + + GSG    +  L+        L        
Sbjct: 102 FLIGGYDVRPR--LYSIDAAGGVTEERFIAAGSGMEFALALLEENFSDGMDL-------- 151

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHRE 176
                 E VDL      +A  RD+YTG+ + +V + K G +RE
Sbjct: 152 -----EEGVDLAVRAVKAAMRRDVYTGEGVTVVTITKEG-YRE 188


>gi|240104109|ref|YP_002960418.1| peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
           gammatolerans EJ3]
 gi|302595730|sp|C5A2D5.1|PSB2_THEGJ RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|239911663|gb|ACS34554.1| Peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
           gammatolerans EJ3]
          Length = 200

 Score = 80.5 bits (197), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 89/170 (52%), Gaps = 16/170 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+  + ++G   DV+AL ++L A+   YQ    + M+   MA LLSN L   ++FPY   
Sbjct: 46  DRIAITTAGSVGDVQALARMLEAQARYYQFTWGRPMTTRAMANLLSNILNENKWFPYMVQ 105

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++GG  +  K  + + DA+G      Y++ GSGS   +  +++  +             
Sbjct: 106 IIIGGYVD--KPELASVDALGGLVFEKYTATGSGSPFAIAIIEDGYRE------------ 151

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGD-KLEIVVLNKGGIHREYMELRK 182
             +S  EA +L      +A +RD+YTG+ K+++VV+ K G+  E++E ++
Sbjct: 152 -DMSIEEAKELAVRAVKTAGKRDVYTGERKVQVVVITKDGMKEEFVEFKE 200


>gi|73667743|ref|YP_303758.1| proteasome subunit beta [Methanosarcina barkeri str. Fusaro]
 gi|121697221|sp|Q46G14.1|PSB_METBF RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|72394905|gb|AAZ69178.1| proteasome endopeptidase complex, beta component, Threonine
           peptidase, MEROPS family T01A [Methanosarcina barkeri
           str. Fusaro]
          Length = 211

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 90/180 (50%), Gaps = 19/180 (10%)

Query: 1   MGSFFYILTSCRA----DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQ 56
           MG+F    T+ +     D   M ++G   D + L +L+     +Y+ + N+ M+  G+A 
Sbjct: 31  MGNFIASKTAKKVYQIDDLVAMTTAGSVGDAQQLVRLVNVESQLYKMRRNESMTIKGIAT 90

Query: 57  LLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIMPFL 115
           L+SN L   R++P     ++GG+D  G G +Y+ DA+ GS E    S+ GSGS +    L
Sbjct: 91  LMSNFLNSNRYYPMMVQLLIGGVDKNGPG-IYSLDALGGSIEETRISATGSGSPMAYGVL 149

Query: 116 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHR 175
           ++Q +               ++  E +DL      +AT+RD  +G+ +++VV+ K    R
Sbjct: 150 EDQYRE-------------DMTVKEGLDLAIRAIHNATKRDSASGENIDVVVITKEAFRR 196


>gi|426355245|ref|XP_004045039.1| PREDICTED: proteasome subunit beta type-1 [Gorilla gorilla gorilla]
          Length = 245

 Score = 79.7 bits (195), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 5/80 (6%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 148 DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 207

Query: 74  NVLGGLDNEGKGCVYTYDAV 93
           N++GGLD EG     T+ AV
Sbjct: 208 NIIGGLDEEG-----TWRAV 222


>gi|119567807|gb|EAW47422.1| proteasome (prosome, macropain) subunit, beta type, 1, isoform
           CRA_c [Homo sapiens]
          Length = 147

 Score = 79.7 bits (195), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 34/70 (48%), Positives = 47/70 (67%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 76  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 135

Query: 74  NVLGGLDNEG 83
           N++GGLD EG
Sbjct: 136 NIIGGLDEEG 145


>gi|212224577|ref|YP_002307813.1| proteasome subunit beta 2 [Thermococcus onnurineus NA1]
 gi|302595811|sp|B6YXV3.1|PSB2_THEON RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|212009534|gb|ACJ16916.1| proteasome, beta subunit 2 [Thermococcus onnurineus NA1]
          Length = 200

 Score = 79.3 bits (194), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 81/168 (48%), Gaps = 16/168 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+  + ++G   DV+AL ++L A    YQ    K MS   MA LLSN L   ++FPY   
Sbjct: 46  DRIAITTAGSVGDVQALARMLEAEARYYQFTWGKPMSTKAMANLLSNILNGNKWFPYLVQ 105

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            +LGG   E    +   D +G      Y++ GSGS   +  L++  K             
Sbjct: 106 IILGGYVEE--PTLANLDPLGGLIFDDYTATGSGSPFAIAVLEDGYKK------------ 151

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGD-KLEIVVLNKGGIHREYMEL 180
             +S  EA +L      +A +RD+YTG  K++IV + K GI  E++E 
Sbjct: 152 -DMSIEEAKELAVRAVRTAGKRDVYTGSRKIQIVAITKEGITEEFVEF 198


>gi|223477879|ref|YP_002582184.1| proteasome subunit beta [Thermococcus sp. AM4]
 gi|214033105|gb|EEB73933.1| Proteasome subunit beta [Thermococcus sp. AM4]
          Length = 200

 Score = 79.3 bits (194), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 89/170 (52%), Gaps = 16/170 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+  + ++G   DV+AL ++L A+   YQ    + M+   MA LLSN L   ++FPY   
Sbjct: 46  DRIAITTAGSVGDVQALARMLEAQARYYQFTWGRPMTTRAMANLLSNILNENKWFPYMVQ 105

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++GG  +  K  + + DA+G      Y++ GSGS   +  +++  +             
Sbjct: 106 ILIGGYVD--KPELASVDALGGLVFEKYTATGSGSPFAIAIIEDGYRE------------ 151

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGD-KLEIVVLNKGGIHREYMELRK 182
             +S  EA +L      +A +RD+YTG+ K+++VV+ K G+  E++E ++
Sbjct: 152 -DMSIEEAKELAVRAVRTAGKRDVYTGERKVQVVVITKDGMKEEFVEFKE 200


>gi|119567806|gb|EAW47421.1| proteasome (prosome, macropain) subunit, beta type, 1, isoform
           CRA_b [Homo sapiens]
          Length = 166

 Score = 79.3 bits (194), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 34/70 (48%), Positives = 47/70 (67%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK V+  SGF  D   L K++ AR  +Y+H +NK M+   +A +LS  LY +RFFPYY +
Sbjct: 76  DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 135

Query: 74  NVLGGLDNEG 83
           N++GGLD EG
Sbjct: 136 NIIGGLDEEG 145


>gi|302348749|ref|YP_003816387.1| proteasome beta subunit [Acidilobus saccharovorans 345-15]
 gi|302329161|gb|ADL19356.1| Proteasome beta subunit [Acidilobus saccharovorans 345-15]
          Length = 207

 Score = 79.0 bits (193), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 86/163 (52%), Gaps = 13/163 (7%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           ++  +A SG  ADV A+ + L A    Y+    + MS   +++LLS  LY  +  P+   
Sbjct: 47  NRAAIAMSGLYADVGAILRYLTAESKYYELTEERTMSLYAISKLLSGILYSYKMLPFIIE 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++GG+D +G+  +YT D++GS     Y + GSG+T  + FL++Q            DA+
Sbjct: 107 ALVGGIDRDGQPKIYTLDSLGSVSEDKYMAVGSGATTALGFLEDQY----------NDAL 156

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHRE 176
           + L +AE V +       + ERD  TGD ++++ ++  G  +E
Sbjct: 157 S-LDQAEQVAV--GALRISMERDASTGDGIDVISISTSGAVKE 196


>gi|375082621|ref|ZP_09729674.1| proteasome subunit beta 2 [Thermococcus litoralis DSM 5473]
 gi|374742699|gb|EHR79084.1| proteasome subunit beta 2 [Thermococcus litoralis DSM 5473]
          Length = 199

 Score = 78.6 bits (192), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 85/170 (50%), Gaps = 16/170 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  + ++G   D++AL ++L A    YQ    K M+   MA LLSN L   ++FPY   
Sbjct: 45  DKIAITTAGSVGDLQALARMLEAEARYYQFTWGKPMTAKAMANLLSNILNESKWFPYMVQ 104

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++GG   E    + + D +G      Y++ GSGS   +  L++  K             
Sbjct: 105 IIIGGYVEE--PTLASLDPLGGLIFDNYTATGSGSPFAIAILEDGYKE------------ 150

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGD-KLEIVVLNKGGIHREYMELRK 182
             ++  EA +L      +A +RD+YTG+ K+++V + K G+  E++E ++
Sbjct: 151 -DMTIEEARELAIRAVRTAGKRDVYTGERKIQVVTITKDGMKEEFVEFKE 199


>gi|315230761|ref|YP_004071197.1| proteasome subunit beta [Thermococcus barophilus MP]
 gi|315183789|gb|ADT83974.1| proteasome subunit beta [Thermococcus barophilus MP]
          Length = 199

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 16/170 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+  + ++G   DV+ L ++L A    YQ    K M+   MA LLSN L   ++FPY   
Sbjct: 45  DRIAITTAGSVGDVQMLARMLEAEARYYQFTWGKPMTAKAMANLLSNILNENKWFPYLVQ 104

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++GG   E    +   D +G      Y++ GSGS   +  L+   +             
Sbjct: 105 IIIGGYVEE--PTLANLDPLGGLIFDDYTATGSGSPFAIAILEEGYRK------------ 150

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGD-KLEIVVLNKGGIHREYMELRK 182
             +S  EA +L      +A +RD+YTGD K+++VV+ K G+  E++E ++
Sbjct: 151 -DMSIEEARELAIRAVRTAGKRDVYTGDRKIQVVVITKEGMKEEFVEFKE 199


>gi|409096228|ref|ZP_11216252.1| proteasome subunit beta [Thermococcus zilligii AN1]
          Length = 201

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 87/170 (51%), Gaps = 16/170 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+  + ++G   DV+AL ++L A    YQ    + M    MA LLSN L   ++FPY   
Sbjct: 47  DRIAITTAGSVGDVQALARMLEAEARYYQFTWGRPMKTRAMANLLSNILNENKWFPYMVQ 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++GG  +E +  + + DA+G      Y++ GSGS   +  +++  +             
Sbjct: 107 ILIGGYVDEPE--LASLDALGGLVFDEYTATGSGSPFAIAIIEDGYRE------------ 152

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGD-KLEIVVLNKGGIHREYMELRK 182
             +S  EA +L      +A +RD+YTGD K+++V + + G+  E++E ++
Sbjct: 153 -DMSVEEAKELAVRAVRTAGKRDVYTGDRKVQVVTITRDGMKEEFVEFKE 201


>gi|124028413|ref|YP_001013733.1| proteasome beta precursor [Hyperthermus butylicus DSM 5456]
 gi|302595715|sp|A2BN27.1|PSB2_HYPBU RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|123979107|gb|ABM81388.1| proteasome beta precursor [Hyperthermus butylicus DSM 5456]
          Length = 212

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 86/170 (50%), Gaps = 16/170 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   M ++G  AD + L + LA     Y+  + ++MS    AQ LS  L+  +F+PY   
Sbjct: 54  DYMAMTTAGLVADAQMLAEWLANHTHYYEIVNKRRMSIHAAAQYLSIILHSAKFYPYIVQ 113

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            +LGG D + +  +Y  D  GS     Y + GSGS   +  +++Q  SP+          
Sbjct: 114 LLLGGYDTQPR--LYNIDWFGSVTEEKYVATGSGSPTAIGVIEDQY-SPN---------- 160

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             LS  EAV+L K   AS+  RD +TG+ +++VV+ K   +REY    KD
Sbjct: 161 --LSMEEAVELAKRAVASSIRRDTFTGNGVDVVVIGK-DFYREYSFELKD 207


>gi|18314179|ref|NP_560846.1| proteasome subunit beta [Pyrobaculum aerophilum str. IM2]
 gi|74561745|sp|Q8ZST5.1|PSB2_PYRAE RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|18161769|gb|AAL65028.1| proteasome, beta subunit [Pyrobaculum aerophilum str. IM2]
          Length = 203

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 90/183 (49%), Gaps = 20/183 (10%)

Query: 5   FYILTSCRA------DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLL 58
           FY L+S         DK  +AS+G  AD++ L K+L      Y+ +  ++ S   MA+LL
Sbjct: 32  FYTLSSAGKKVFVIDDKLAIASAGIIADMQTLAKILKLNAKAYELEMKRKPSTHSMARLL 91

Query: 59  SNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ 118
           S  ++ +RF P+++  ++GG+D EG   +   D +GS     Y++ G+G+ L +  LD  
Sbjct: 92  SVIMFSRRFMPFFAEVLVGGIDEEGPHLI-VMDPLGSLIEDNYAALGTGAKLAVAVLDTG 150

Query: 119 LKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYM 178
            +               ++  EA  L      +A ERD  +G  +++ +++K G   E +
Sbjct: 151 YRP-------------DITVEEAKKLAVQALKAAIERDPVSGGGIDLAIVDKNGAREEEV 197

Query: 179 ELR 181
            ++
Sbjct: 198 RVQ 200


>gi|395645475|ref|ZP_10433335.1| proteasome endopeptidase complex, beta subunit [Methanofollis
           liminatans DSM 4140]
 gi|395442215|gb|EJG06972.1| proteasome endopeptidase complex, beta subunit [Methanofollis
           liminatans DSM 4140]
          Length = 212

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 82/159 (51%), Gaps = 15/159 (9%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           AD+  M ++G   D ++L +L+     +Y+ +H K +S    A LLSN L   R++PYY 
Sbjct: 49  ADRIGMTTAGGVGDAQSLARLMQVECSLYKVRHGKPISVGAAATLLSNYLQQNRYYPYYV 108

Query: 73  FNVLGGLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
             ++GG+D  G   VY+ DA+ G+ +     S GSGS +    L+++  +          
Sbjct: 109 QLLVGGVDRNGP-SVYSVDAMGGASKETDIVSTGSGSPMAYGVLEDRYHA---------- 157

Query: 132 AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 170
               ++E EAVDL      +A  RD  +G+ + IVV+ +
Sbjct: 158 ---DMNEPEAVDLATRSLKAAMRRDSASGENISIVVITR 193


>gi|329764912|ref|ZP_08256501.1| proteasome endopeptidase complex [Candidatus Nitrosoarchaeum limnia
           SFB1]
 gi|393795409|ref|ZP_10378773.1| proteasome endopeptidase complex protein [Candidatus
           Nitrosoarchaeum limnia BG20]
 gi|329138581|gb|EGG42828.1| proteasome endopeptidase complex [Candidatus Nitrosoarchaeum limnia
           SFB1]
          Length = 195

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 88/159 (55%), Gaps = 16/159 (10%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G  AD++ L   +AA   I + +  + +    +A+++SN +Y +R+FP  +  ++GG+ 
Sbjct: 51  AGLVADMQILTLQIAALAKIRKMELKRDVPPNTIAKMMSNMMYERRYFPLLTQVIVGGII 110

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
           +  K  ++T D +GS     Y++ G+G+ + +  LD Q K P+            +++ E
Sbjct: 111 D--KPILFTLDPLGSVLPDEYAAVGTGAEMALGVLDPQFK-PN------------MTQEE 155

Query: 141 AVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYME 179
           A+DL K    SA  RD  +GD L+++V+ K GI +EY E
Sbjct: 156 AIDLAKRAVRSAALRDSASGDGLDVLVITKDGI-KEYTE 193


>gi|375082946|ref|ZP_09729987.1| proteasome subunit beta 1 [Thermococcus litoralis DSM 5473]
 gi|374742376|gb|EHR78773.1| proteasome subunit beta 1 [Thermococcus litoralis DSM 5473]
          Length = 204

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 19/170 (11%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   +A +G   D+ +L +LL A   +Y+ +  ++MS   +A L SN L  +R+FPY+ +
Sbjct: 45  DHLALAGAGSVGDILSLVRLLRAEAKLYRARVGREMSTKALATLTSNILSGRRYFPYFGW 104

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++ G D   K  +Y+ D  G      Y S GSG       LDN+               
Sbjct: 105 FLVAGYDE--KPGLYSIDMAGGITEDKYVSAGSGMEFAYSVLDNEYDE------------ 150

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             ++  + V L      +A +RD++TGD + +VV+ K G    Y EL K+
Sbjct: 151 -KMNVKKGVKLAIKAINTAIKRDVFTGDGIMVVVITKEG----YSELSKE 195


>gi|242399181|ref|YP_002994605.1| Proteasome, beta subunit 2 [Thermococcus sibiricus MM 739]
 gi|302595734|sp|C6A3R1.1|PSB2_THESM RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|242265574|gb|ACS90256.1| Proteasome, beta subunit 2 [Thermococcus sibiricus MM 739]
          Length = 199

 Score = 76.6 bits (187), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 85/170 (50%), Gaps = 16/170 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+  + ++G   D++AL ++L A    YQ    K M+   MA LLSN L   ++FPY   
Sbjct: 45  DRIAITTAGSVGDLQALARMLEAEAKYYQFTWGKPMTAKAMANLLSNILNESKWFPYMVQ 104

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++GG   E    + + D +G      Y++ GSGS   +  L++  K             
Sbjct: 105 IIIGGYVEE--PTLASLDPLGGLIFDNYTTTGSGSPFAIAILEDGYKE------------ 150

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGD-KLEIVVLNKGGIHREYMELRK 182
             +S  +A +L      +A +RD+YTG+ K++++ + K G+  E++E ++
Sbjct: 151 -DMSIEDARELAIKAVRTAGKRDVYTGERKIQVITITKEGMKEEFVEFKE 199


>gi|167044620|gb|ABZ09292.1| putative Proteasome A-type and B-type [uncultured marine
           crenarchaeote HF4000_APKG7F19]
          Length = 199

 Score = 76.6 bits (187), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 82/154 (53%), Gaps = 15/154 (9%)

Query: 19  ASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGG 78
           A +G  AD++ L   ++A   I + +  +++    +A+++SN +Y +RFFP  +  ++GG
Sbjct: 52  ACAGLVADMQILSLQISALAKIRKMEIKREVPPNTIAKMMSNMMYERRFFPLLTQVIVGG 111

Query: 79  LDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSE 138
           L +  K  +YT D +GS     Y++ G+G+ + +  LD Q K               L+E
Sbjct: 112 LVD--KPVIYTLDPLGSVLPDDYAAVGTGAEMALGILDQQYKK-------------ELNE 156

Query: 139 AEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
            EA DL      +A  RD  +GD ++++V+NK G
Sbjct: 157 TEATDLAVKSIRAAILRDSASGDNIDVLVINKYG 190


>gi|119872266|ref|YP_930273.1| proteasome endopeptidase complex protein [Pyrobaculum islandicum
           DSM 4184]
 gi|302595707|sp|A1RSJ8.1|PSB1_PYRIL RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|119673674|gb|ABL87930.1| Proteasome endopeptidase complex [Pyrobaculum islandicum DSM 4184]
          Length = 203

 Score = 76.3 bits (186), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 90/183 (49%), Gaps = 20/183 (10%)

Query: 5   FYILTSCRA------DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLL 58
           FY L+S         DK  +AS+G  AD++ L ++L    + Y+ +  K+ +   MA+LL
Sbjct: 32  FYTLSSAGKKVFIINDKLAIASAGIIADMQTLARILKLNVMSYELEVRKKPTVRAMAKLL 91

Query: 59  SNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ 118
           S  ++ +R  P+Y+  ++GG+D EG   +   D +GS     Y++ G+G+ L +  LD  
Sbjct: 92  SIIMFSRRLLPFYAEVLVGGVDEEGPHLI-VMDPLGSLIEDNYAALGTGAKLAVSLLDAT 150

Query: 119 LKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYM 178
            +               +S  EA  L      +A ERD  +G  +++ V++  G   E +
Sbjct: 151 YRP-------------DISLQEAKKLAVQAIKAAIERDPVSGGGIDLAVVDNNGAREEEV 197

Query: 179 ELR 181
           +++
Sbjct: 198 KIQ 200


>gi|429217521|ref|YP_007175511.1| proteasome endopeptidase complex subunit beta [Caldisphaera
           lagunensis DSM 15908]
 gi|429134050|gb|AFZ71062.1| proteasome endopeptidase complex, archaeal, beta subunit
           [Caldisphaera lagunensis DSM 15908]
          Length = 210

 Score = 76.3 bits (186), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 15/169 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   M  +G  AD + L   +     +Y+  + ++++  GMA LL+N L+  +++PY   
Sbjct: 54  DYAAMTIAGLVADAQMLADAIREEARLYETMNKRKLTVKGMATLLANVLFSTKYYPYLVQ 113

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++GG D E +  +Y  D  GS      +S GSG             SP  L +  +D  
Sbjct: 114 LIVGGYDTEPR--LYNLDYFGSITEEKMTSTGSG-------------SPVALGVLEKDYR 158

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRK 182
             LS  EA++L       A  RD  TGD ++++ ++ GGI   ++ L++
Sbjct: 159 PDLSLEEAMNLAAKAIKVAIMRDSATGDGVDVIAISSGGIRESFIPLQQ 207


>gi|240103778|ref|YP_002960087.1| peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
           gammatolerans EJ3]
 gi|302595756|sp|C5A7L1.1|PSB1_THEGJ RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|239911332|gb|ACS34223.1| Peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
           gammatolerans EJ3]
          Length = 201

 Score = 76.3 bits (186), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 16/163 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   +A +G   D+ +L +LL A   +Y+ +  ++MS   +A L+SN L+  R  PY+++
Sbjct: 49  DHLAIAGAGLVGDILSLVRLLRAEAKLYRAKVGREMSVKALATLVSNVLHGSRHLPYFAW 108

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++GG D + +  +Y+ DA G      + + GSG    +  L+        L        
Sbjct: 109 FLIGGYDVKPR--LYSIDAAGGVTEERFIAAGSGMEFALALLEENFSDGMGL-------- 158

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHRE 176
                 E +DL      +A  RD+YTG+ + +V + K G +RE
Sbjct: 159 -----DEGIDLAVRAVKAAIRRDVYTGEGVTVVAITKEG-YRE 195


>gi|429216737|ref|YP_007174727.1| proteasome endopeptidase complex subunit beta [Caldisphaera
           lagunensis DSM 15908]
 gi|429133266|gb|AFZ70278.1| proteasome endopeptidase complex, archaeal, beta subunit
           [Caldisphaera lagunensis DSM 15908]
          Length = 207

 Score = 76.3 bits (186), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 81/159 (50%), Gaps = 13/159 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+  +A +G  ADV  L +++ A    Y+  +   MS   +++L SN LY  +  P+   
Sbjct: 46  DRVGIALTGLYADVSGLVRIMNAEISYYETTNETTMSLYAISKLFSNILYSYKMLPFLIE 105

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           +++GGLD +GK  +YT DA+GS     Y + GSG T  +  L+              D +
Sbjct: 106 SIIGGLDRDGKPKIYTLDALGSVTEDKYMAVGSGGTTALGVLE----------YSYNDNL 155

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
           T + EAE + +  T   +  ERD  +GD ++++++   G
Sbjct: 156 T-IDEAEKIAI--TALKTTMERDSSSGDGIDLLIIKSEG 191


>gi|337284212|ref|YP_004623686.1| proteasome subunit beta [Pyrococcus yayanosii CH1]
 gi|334900146|gb|AEH24414.1| proteasome beta subunit precursor [Pyrococcus yayanosii CH1]
          Length = 204

 Score = 76.3 bits (186), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 16/166 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           ++  +A +G   D+ +L +LL A   +Y+ +  + MS   +A LL+N L   R+FPY  +
Sbjct: 46  ERLAIAGAGNVGDILSLVRLLRAEVRLYRSRVGRSMSAKALATLLANILNGTRYFPYLVW 105

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++GG D+  +  +Y+ D  G      Y + GSG       LD+Q K             
Sbjct: 106 FLVGGYDDAPR--LYSVDMAGGITEDKYVAAGSGMEFAFSILDSQYKP------------ 151

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYME 179
             +S  E V L      SA +RD++TG+ + +V + + G +RE  E
Sbjct: 152 -EMSVEEGVKLAVRAINSAIKRDVFTGEGITVVTITEKG-YRELSE 195


>gi|20092669|ref|NP_618744.1| multicatalytic endopeptidase complex, subunit beta [Methanosarcina
           acetivorans C2A]
 gi|74551014|sp|Q8TJB5.1|PSB_METAC RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|19917953|gb|AAM07224.1| multicatalytic endopeptidase complex, subunit beta [Methanosarcina
           acetivorans C2A]
          Length = 210

 Score = 76.3 bits (186), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 94/191 (49%), Gaps = 22/191 (11%)

Query: 1   MGSFFYILTSCRA----DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQ 56
           MG F    T+ +     D   M ++G   D + L +L++    +Y+ + N+ M+  G+A 
Sbjct: 31  MGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQLVRLVSVESQLYKMRRNESMTIKGIAT 90

Query: 57  LLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIMPFL 115
           L+SN L   R++P     ++GG+D  G   +Y+ DA+ GS E    S+ GSGS +    L
Sbjct: 91  LMSNFLNANRYYPMMVQLLIGGVDKNGP-AIYSLDAMGGSIEETRISATGSGSPMAYGVL 149

Query: 116 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHR 175
           ++Q K               ++  E +DL      +A +RD  +G+ +++VV+ K    R
Sbjct: 150 EDQYKE-------------DIAVKEGLDLAIRAIHNAMKRDSASGENIDVVVITKEAFKR 196

Query: 176 ---EYMELRKD 183
              E ++ R+D
Sbjct: 197 LDPEEVKSRRD 207


>gi|397613757|gb|EJK62406.1| hypothetical protein THAOC_16986 [Thalassiosira oceanica]
          Length = 363

 Score = 75.9 bits (185), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 85/205 (41%), Gaps = 45/205 (21%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQ-HNKQMSCPGMAQLLSNTLYYKRFFPYYSFNV 75
           ++ S+G  AD +AL++ +       +    +  M    +A LL   LY +R FP+YSF V
Sbjct: 153 MVGSAGCAADCEALKRQMRLEVSALECSLRSGPMHVQSIANLLQQVLYSRRSFPFYSFCV 212

Query: 76  LGGLDNEG-----KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSP-------- 122
           + G+  +       G  Y YDA+GSYERV  +S G+G  L+ P LD     P        
Sbjct: 213 VAGIGRDAHGDALSGYAYVYDAIGSYERVAVASSGTGRELMQPVLDRLFSEPCDGSDNSC 272

Query: 123 ---------------SPLLL---------------PAQDAVTPLSEAEAVDLVKTCFASA 152
                           P+ +               P Q  V+  S   AV  V T F S 
Sbjct: 273 EQVRDGVSLVEGVGRDPMAISAGEQRVGAAGGLRPPVQTTVS-CSWQTAVKHVATAFQSV 331

Query: 153 TERDIYTGDKLEIVVLNKGGIHREY 177
            ER+I  GD + + V+   G  + Y
Sbjct: 332 AEREISVGDDVVVCVMRSNGSTQTY 356


>gi|340344597|ref|ZP_08667729.1| Proteasome endopeptidase complex [Candidatus Nitrosoarchaeum
           koreensis MY1]
 gi|339519738|gb|EGP93461.1| Proteasome endopeptidase complex [Candidatus Nitrosoarchaeum
           koreensis MY1]
          Length = 197

 Score = 75.5 bits (184), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 89/165 (53%), Gaps = 16/165 (9%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           K   A +G  AD++ L   +AA   I + +  + +    +A+++SN +Y +R+FP  +  
Sbjct: 47  KVGAACAGLVADMQILTLQIAALAKIRKMELKRDVPPNTVAKMMSNMMYERRYFPLLTQV 106

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 134
           ++GG+ +  K  +YT D +GS     Y++ G+G+ + +  LD Q K P+           
Sbjct: 107 IVGGVVD--KPILYTLDPLGSVLPDEYAAVGTGAEMALGVLDPQFK-PN----------- 152

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYME 179
            +++ EA+DL K    SA  RD  +GD L+I+V+ K G  +E+ E
Sbjct: 153 -MTQEEAIDLAKRAVRSAALRDSASGDGLDILVVTKDG-TKEFTE 195


>gi|118575464|ref|YP_875207.1| 20S proteasome, alpha and beta subunit [Cenarchaeum symbiosum A]
 gi|302595701|sp|A0RU86.1|PSB1_CENSY RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|118193985|gb|ABK76903.1| 20S proteasome, alpha and beta subunit [Cenarchaeum symbiosum A]
          Length = 193

 Score = 75.5 bits (184), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 82/154 (53%), Gaps = 15/154 (9%)

Query: 19  ASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGG 78
           A +G  AD++ L   ++A   I +    + +    +A+++SN +Y +RFFP  +  ++GG
Sbjct: 47  ACAGLVADMQILSLQISALAKIRKMDLKRDIPPNSVAKMMSNMMYERRFFPLLTQVIVGG 106

Query: 79  LDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSE 138
           +   G+  +YT D++GS     Y++ G+G+ + +  LD Q KS              +SE
Sbjct: 107 V--VGEPAIYTLDSLGSVLPDEYAAVGTGAEMALGVLDPQFKS-------------GMSE 151

Query: 139 AEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
            +AVDL      SA  RD ++GD L+I+ L+  G
Sbjct: 152 KDAVDLAVRGIRSAALRDSFSGDGLDILALDANG 185


>gi|386876203|ref|ZP_10118332.1| putative proteasome endopeptidase complex, beta subunit [Candidatus
           Nitrosopumilus salaria BD31]
 gi|386805984|gb|EIJ65474.1| putative proteasome endopeptidase complex, beta subunit [Candidatus
           Nitrosopumilus salaria BD31]
          Length = 194

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 87/159 (54%), Gaps = 16/159 (10%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G  AD++ L   +AA   I + +  + +    +A+++SN +Y +R+FP  +  ++GG+ 
Sbjct: 49  AGLVADMQILTLQIAALAKIRKMELKRDVPPNTIAKMMSNMMYERRYFPLLTQVIVGGVV 108

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
           +  K  +YT D +GS     Y++ G+G+ + +  LD Q K P+            +S+ E
Sbjct: 109 D--KPIMYTLDPLGSVLPDEYAAVGTGAEMALGVLDPQYK-PN------------MSKDE 153

Query: 141 AVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYME 179
           A+DL K    SA  RD  +GD ++I+V+ K GI  E+ E
Sbjct: 154 AIDLAKRAVRSAALRDSASGDGIDILVITKDGIE-EFTE 191


>gi|17380265|sp|Q9P992.1|PSB_METTE RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|790625|gb|AAA91642.1| beta-type proteasome subunit [Methanosarcina thermophila TM-1]
          Length = 210

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 19/180 (10%)

Query: 1   MGSFFYILTSCRA----DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQ 56
           MG F    T+ +     D   M ++G   D + L +L++    +Y+ + ++ M+  G+  
Sbjct: 31  MGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQLVRLVSVESQLYKMRRDESMTIKGITT 90

Query: 57  LLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIMPFL 115
           L+SN L   R++P     ++GG+D  G G +Y+ DA+ GS E    S+ GSGS +    L
Sbjct: 91  LMSNFLSRNRYYPMMVQLLIGGVDKNGPG-IYSLDAMGGSIEETRISATGSGSPMAYGVL 149

Query: 116 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHR 175
           ++Q +               ++  E +DL      +AT+RD  +G+ +++VV+ K    R
Sbjct: 150 EDQYRE-------------NMTVKEGLDLAIRAIHNATKRDSASGENIDVVVITKEAFKR 196


>gi|242398879|ref|YP_002994303.1| Proteasome subunit beta precursor [Thermococcus sibiricus MM 739]
 gi|302595703|sp|C6A2V9.1|PSB1_THESM RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|242265272|gb|ACS89954.1| Proteasome subunit beta precursor [Thermococcus sibiricus MM 739]
          Length = 207

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 78/170 (45%), Gaps = 19/170 (11%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   +A +G   D+ +L + L A   +Y+ +  K+MS   +A L SN L  +++ PY+ +
Sbjct: 48  DHLALAGAGAVGDILSLVRALRAESKLYRAKVGKEMSTKALATLTSNILSGRKYLPYFGW 107

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++GG D   K  +Y+ D  G      Y S GSG       LDN+      L        
Sbjct: 108 FLIGGYDE--KPSLYSIDMAGGITEDKYVSAGSGMEFAYSILDNEYSEKITL-------- 157

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                   V L      +A +RD++TGD + +V +++ G    Y EL K+
Sbjct: 158 -----NNGVKLAIKAINAAIKRDVFTGDGIMVVTIDREG----YRELSKE 198


>gi|14591201|ref|NP_143277.1| proteasome subunit beta [Pyrococcus horikoshii OT3]
 gi|17380245|sp|O50110.1|PSB2_PYRHO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|3257825|dbj|BAA30508.1| 207aa long hypothetical proteasome beta subunit precursor
           [Pyrococcus horikoshii OT3]
          Length = 207

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 19/176 (10%)

Query: 1   MGSFFYILTSCRADKC----VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQ 56
           +G+  Y     +  K      +A +G   D+  L +LL A   +Y  Q  K+MS   +A 
Sbjct: 32  LGNIIYARNVTKIHKIDEHLAIAGAGDVGDILNLVRLLRAEAKLYYSQSGKRMSVKALAT 91

Query: 57  LLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLD 116
           LL+N +   ++FPY ++ ++GG D + K  +Y+ D VG      Y++ GSG       LD
Sbjct: 92  LLANIMNGAKYFPYLAWFLVGGYDEKPK--LYSVDMVGGITEDKYATAGSGMEFAYSILD 149

Query: 117 NQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
           ++ K               L+  E + L      +A +RD+++GD + +V + K G
Sbjct: 150 SEYKD-------------NLTLEEGIKLAVKAINTAIKRDVFSGDGILVVTITKEG 192


>gi|389860550|ref|YP_006362789.1| Proteasome beta subunit [Thermogladius cellulolyticus 1633]
 gi|388525453|gb|AFK50651.1| Proteasome beta subunit [Thermogladius cellulolyticus 1633]
          Length = 205

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 15/156 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G   D+  L ++L      Y+ +H +++    +A+LLS  LY  + FP  +  V+GG D
Sbjct: 55  AGLTGDMNFLYRVLKTEAKNYELEHGREIKTRSLAKLLSIILYSYKLFPMLTEAVVGGFD 114

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
                 ++  DAVGS     Y++ GSGS L +  ++   +   PL              E
Sbjct: 115 E--APSLFVLDAVGSLLEERYTALGSGSQLALSIIEQSYREDMPL-------------EE 159

Query: 141 AVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHRE 176
           A +L      +A ERD+ +GD ++++V+ + GI  E
Sbjct: 160 AKNLAVKAVLAAIERDVLSGDGVDVLVITREGIKSE 195


>gi|70606469|ref|YP_255339.1| proteasome protease subunit [Sulfolobus acidocaldarius DSM 639]
 gi|449066683|ref|YP_007433765.1| proteasome protease subunit [Sulfolobus acidocaldarius N8]
 gi|449068957|ref|YP_007436038.1| proteasome protease subunit [Sulfolobus acidocaldarius Ron12/I]
 gi|121697373|sp|Q4JAY3.1|PSB1_SULAC RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|68567117|gb|AAY80046.1| proteasome protease subunit [Sulfolobus acidocaldarius DSM 639]
 gi|449035191|gb|AGE70617.1| proteasome protease subunit [Sulfolobus acidocaldarius N8]
 gi|449037465|gb|AGE72890.1| proteasome protease subunit [Sulfolobus acidocaldarius Ron12/I]
          Length = 195

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 84/163 (51%), Gaps = 14/163 (8%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLG 77
           +A +G   D++ L +++      Y+  +++++S    A+LLS  LY  +  PY S  + G
Sbjct: 47  IAGAGIVGDIQTLTRIMNVEIKYYEMYNSRKISARAAAKLLSVILYQNKVLPYISELLFG 106

Query: 78  GLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLS 137
           G+D +G   ++  D +GS     Y++ GSG+ + +  L+ +                 L+
Sbjct: 107 GVDEDGP-KLFILDPIGSLIEDSYAAVGSGARVAIGVLEAEYNE-------------SLT 152

Query: 138 EAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMEL 180
              A +L      SA ERD+ +GD ++I+++NK  I+ +++++
Sbjct: 153 SEAAKELAIKSMKSAVERDVMSGDGIDILIINKNNIYEDFIKI 195


>gi|57641364|ref|YP_183842.1| proteasome subunit beta [Thermococcus kodakarensis KOD1]
 gi|74502448|sp|Q5JDJ9.1|PSB1_PYRKO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|57159688|dbj|BAD85618.1| proteasome, beta subunit [Thermococcus kodakarensis KOD1]
          Length = 203

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 82/166 (49%), Gaps = 16/166 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   +A +G   D+ +L +LL A   +Y+ + +++MS   +A L SN L+  R F Y ++
Sbjct: 46  DHLAIAGAGTVGDILSLVRLLRAEAKLYRAKVSREMSVKALATLTSNILHSGRGFAYMAW 105

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++GG D+  +  +Y+ DA G      +++ GSG       L+   +   PL        
Sbjct: 106 FLVGGYDSAPR--LYSIDAAGGVTEDRFTAAGSGMEFAFSVLEENYRDGIPL-------- 155

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYME 179
                 E V L      +AT+RD++TG  + +V + + G +RE+ E
Sbjct: 156 -----EEGVKLALRAIKAATKRDVFTGGGVTLVTITEEG-YREWSE 195


>gi|118431089|ref|NP_147297.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
 gi|121732295|sp|Q9YER0.2|PSB2_AERPE RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|116062415|dbj|BAA79486.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
          Length = 219

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 22/180 (12%)

Query: 6   YILTSCRADKCVMAS-------SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLL 58
           +++ S R  K VM S       SG  AD + L  +L     +Y+  +  + S   +A LL
Sbjct: 49  FLIASRRVKKIVMLSNYVAMTVSGLVADAQILSDVLREEIRLYEMTNKVKPSVRFVASLL 108

Query: 59  SNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ 118
           SN L+  +FFPY    ++GG D + +  +YT D  GS     Y++ GSGS +    L+ +
Sbjct: 109 SNILFSSKFFPYIVQLIVGGYDTQPR--LYTLDLFGSITEDKYTATGSGSPIAYGVLEER 166

Query: 119 LKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYM 178
            +               LS  EA+ +  T   SA  RD  +GD  ++VV+   G   +++
Sbjct: 167 YRE-------------DLSVEEAIKVATTAIRSAVLRDAASGDGADVVVIGPQGYEEKFI 213


>gi|21226796|ref|NP_632718.1| proteasome subunit beta [Methanosarcina mazei Go1]
 gi|452209277|ref|YP_007489391.1| Proteasome subunit beta, archaeal [Methanosarcina mazei Tuc01]
 gi|74550648|sp|Q8PZ04.1|PSB_METMA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|20905092|gb|AAM30390.1| Proteasome, beta subunit [Methanosarcina mazei Go1]
 gi|452099179|gb|AGF96119.1| Proteasome subunit beta, archaeal [Methanosarcina mazei Tuc01]
          Length = 210

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 88/180 (48%), Gaps = 19/180 (10%)

Query: 1   MGSFFYILTSCRA----DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQ 56
           MG F    T+ +     D   M ++G   D + L +L++    +Y+ + N+ M+  G+A 
Sbjct: 31  MGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQLVRLVSVESQLYKMRRNESMTIKGIAT 90

Query: 57  LLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIMPFL 115
           L+SN L   R++P     ++GG+D  G   +Y+ D + GS E    S+ GSGS +    L
Sbjct: 91  LMSNFLNANRYYPMMVQLLIGGVDKNGP-AIYSLDPMGGSIEETRISATGSGSPMAYGVL 149

Query: 116 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHR 175
           ++Q +               ++  E +DL      +AT+RD  +G+ +++VV+ K    R
Sbjct: 150 EDQYRE-------------DIAVKEGLDLAIRAIHNATKRDSASGENIDVVVITKEAFKR 196


>gi|409095355|ref|ZP_11215379.1| proteasome subunit beta [Thermococcus zilligii AN1]
          Length = 206

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 19/170 (11%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   +A +G   D+ ++ +LL A   +Y+ +  ++MS   +  L++N L+  R + Y+++
Sbjct: 49  DHLAIAGAGLVGDILSMVRLLRAEARLYRARVGREMSVKVLTTLIANILHGGRGYGYFAW 108

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++GG D E +  +Y+ DA G      Y + GSG    +  L+N+               
Sbjct: 109 FLVGGYDTEPR--LYSIDAAGGVTEEKYVAAGSGMEFALAILENEFSE------------ 154

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             LS  + + L      +A +RD+YTG+ + +VV+ K G    Y EL  D
Sbjct: 155 -GLSLEDGMRLAAKAVNAAIKRDVYTGEGITLVVVTKEG----YRELGDD 199


>gi|407464585|ref|YP_006775467.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
           sp. AR2]
 gi|407047773|gb|AFS82525.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
           sp. AR2]
          Length = 194

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 86/159 (54%), Gaps = 16/159 (10%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G  AD++ L   +AA   I + +  + +    +A+++SN +Y +R+FP  +  ++GG+ 
Sbjct: 49  AGLVADMQILTLQIAALAKIRKMELKRDVPPNTVAKMMSNMMYERRYFPLLTQVIVGGVV 108

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
           +  K  +YT D +GS     Y++ G+G+ + +  LD Q K P+            +++ E
Sbjct: 109 D--KPIMYTLDPLGSVLPDEYAAVGTGAEMALGVLDPQFK-PN------------MTKDE 153

Query: 141 AVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYME 179
           AVDL K    +A  RD  +GD L+I+V+ K G   EY E
Sbjct: 154 AVDLAKRAVRAAALRDSASGDGLDILVITKDGTE-EYSE 191


>gi|379005617|ref|YP_005261289.1| proteasome endopeptidase complex, archaeal, beta subunit
           [Pyrobaculum oguniense TE7]
 gi|375161070|gb|AFA40682.1| proteasome endopeptidase complex, archaeal, beta subunit
           [Pyrobaculum oguniense TE7]
          Length = 203

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 93/183 (50%), Gaps = 20/183 (10%)

Query: 5   FYILTSCRA------DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLL 58
           FY L+S         DK  +AS+G  AD+++L +++      Y+ +  K+ +   MA+LL
Sbjct: 32  FYTLSSAGKKVFVIDDKLAIASAGIIADMQSLARIVKINAKAYELETRKKPTVRSMAKLL 91

Query: 59  SNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ 118
           S  ++ +R+ P+++  ++GG+D EG   +   D +GS     Y++ G+G+ L +  LD  
Sbjct: 92  SVIMFSRRYMPFFAEVLVGGVDEEGNHLI-VMDPLGSLIEDNYAALGTGAKLAISVLDTG 150

Query: 119 LKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYM 178
            +    L    QDA           L      +A ERD  +G  +++V++++ G   E +
Sbjct: 151 YREDITL----QDAKK---------LAVKALKAAIERDPVSGGGIDLVLIDQTGAKEEEV 197

Query: 179 ELR 181
           +++
Sbjct: 198 KVQ 200


>gi|407462234|ref|YP_006773551.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
           koreensis AR1]
 gi|407045856|gb|AFS80609.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
           koreensis AR1]
          Length = 194

 Score = 73.9 bits (180), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 88/162 (54%), Gaps = 16/162 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G  AD++ L   +AA   I + +  + +    +A+++SN +Y +R+FP  +  ++GG+ 
Sbjct: 49  AGLVADMQILSLQIAALAKIRKMELKRDVPPNTVAKMMSNMMYERRYFPLLTQVIVGGVV 108

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
           +  K  +YT D +GS     Y++ G+G+ + +  LD Q K P+            +++ E
Sbjct: 109 D--KPIMYTLDPLGSVLPDEYAAVGTGAEMALGVLDPQFK-PN------------MTKDE 153

Query: 141 AVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRK 182
           A+DL K    +A+ RD  +GD L+I+V+ K G   E+ E  K
Sbjct: 154 AIDLAKRAVRAASLRDSASGDGLDILVITKDGTE-EFTEAIK 194


>gi|145592407|ref|YP_001154409.1| proteasome endopeptidase complex protein [Pyrobaculum arsenaticum
           DSM 13514]
 gi|302595720|sp|A4WMZ0.1|PSB2_PYRAR RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|145284175|gb|ABP51757.1| Proteasome endopeptidase complex [Pyrobaculum arsenaticum DSM
           13514]
          Length = 203

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 93/183 (50%), Gaps = 20/183 (10%)

Query: 5   FYILTSCRA------DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLL 58
           FY L+S         DK  +AS+G  AD+++L +++      Y+ +  K+ +   MA+LL
Sbjct: 32  FYTLSSAGRKVFVIDDKLAIASAGIIADMQSLARIVKINAKAYELETRKKPTVRSMAKLL 91

Query: 59  SNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ 118
           S  ++ +R+ P+++  ++GG+D EG   +   D +GS     Y++ G+G+ L +  LD  
Sbjct: 92  SVIMFSRRYMPFFAEVLVGGVDEEGSHLI-VMDPLGSLIEDNYAALGTGAKLAISVLDTG 150

Query: 119 LKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYM 178
            +    L    QDA           L      +A ERD  +G  +++V++++ G   E +
Sbjct: 151 YREDITL----QDAKK---------LAVKALKAAIERDPVSGGGIDLVLIDQTGAKEEEV 197

Query: 179 ELR 181
           +++
Sbjct: 198 KVQ 200


>gi|390960707|ref|YP_006424541.1| proteasome subunit beta 1 [Thermococcus sp. CL1]
 gi|390519015|gb|AFL94747.1| proteasome subunit beta 1 [Thermococcus sp. CL1]
          Length = 203

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 16/164 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   +A +G   D+ +L +LL A   +Y+ +  K+MS   +A L SN L+  RF PY+ +
Sbjct: 46  DHLALAGAGSVGDILSLVRLLRAEAKLYRARVGKEMSVKALATLTSNVLHGNRFMPYFGW 105

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++ G D   K  +Y+ D  G      +++ GSG       L+   +   PL        
Sbjct: 106 FLIAGHDE--KPGLYSIDMAGGVTEDKFTAAGSGMEFAFSILEENYREDMPL-------- 155

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREY 177
                   V L      +AT RD++TG  + +V + + G +RE+
Sbjct: 156 -----EGGVKLALRAIKAATRRDVFTGGGVTLVTVTREG-YREW 193


>gi|212223310|ref|YP_002306546.1| proteasome subunit beta [Thermococcus onnurineus NA1]
 gi|302595732|sp|B6YSW2.1|PSB1_THEON RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|212008267|gb|ACJ15649.1| proteasome, beta subunit [Thermococcus onnurineus NA1]
          Length = 203

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 18/169 (10%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   +A +G   D+ +L +LL A   +Y+ +  +++S   +A L SN L+  RF PY+ +
Sbjct: 46  DHLALAGAGSVGDILSLVRLLRAEVKLYRAKVGREISVKALATLTSNILHGSRFMPYFGW 105

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++ G D   K  +Y+ D  G      +++ GSG  L    L++  K             
Sbjct: 106 FLIAGYDE--KPALYSLDMAGGVTEDKFTAAGSGMELAFAVLEDGYKD------------ 151

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG---IHREYME 179
             ++  E V L       AT RD++TGD + +V + + G   ++RE +E
Sbjct: 152 -DINVEEGVKLALKAIKIATRRDVFTGDGITLVTVTEEGYRELNREEIE 199


>gi|315231929|ref|YP_004072365.1| proteasome subunit beta [Thermococcus barophilus MP]
 gi|315184957|gb|ADT85142.1| proteasome subunit beta [Thermococcus barophilus MP]
          Length = 181

 Score = 73.2 bits (178), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 19/165 (11%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLG 77
           +A +G   D+ +L ++L A   +Y+ +  ++MS   +A L +N L   ++FPY+ + ++G
Sbjct: 26  LAGAGNVGDILSLVRMLRAETKLYRARVGREMSVKALATLTANILNGTKYFPYFGWFLIG 85

Query: 78  GLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLS 137
           G D   K  +Y+ D  G      Y S GSG       L+N+ K               +S
Sbjct: 86  GYDE--KPNLYSVDMAGGMTEDKYVSAGSGMEFAYAVLENEYKE-------------DMS 130

Query: 138 EAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRK 182
             E V L      +A +RD++TGD + +V + K G    Y EL K
Sbjct: 131 VDEGVKLAVKAINTAIKRDVFTGDGILVVKITKEG----YRELDK 171


>gi|218884589|ref|YP_002428971.1| Proteasome subunit [Desulfurococcus kamchatkensis 1221n]
 gi|390939081|ref|YP_006402819.1| proteasome endopeptidase complex subunit beta [Desulfurococcus
           fermentans DSM 16532]
 gi|302595704|sp|B8D673.1|PSB1_DESK1 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|218766205|gb|ACL11604.1| Proteasome subunit [Desulfurococcus kamchatkensis 1221n]
 gi|390192188|gb|AFL67244.1| proteasome endopeptidase complex, beta subunit [Desulfurococcus
           fermentans DSM 16532]
          Length = 202

 Score = 72.8 bits (177), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 18/154 (11%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G   DV  L K+L      Y+ QH +++    +A+LLS  LY  +  P  +  V+GG D
Sbjct: 53  AGLMGDVNFLVKVLRLEAKNYELQHGREIKTRSLAKLLSVILYSYKLAPMLTEVVVGGYD 112

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
            EG   +Y  D VGS     Y + GSG+ L + +++           P  +    L EAE
Sbjct: 113 EEGP-SLYILDPVGSVIEEKYVAVGSGAQLALGYIE-----------PRYNPGLGLKEAE 160

Query: 141 --AVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
             AV+ VKT      ERD+ +GD +++VV++K G
Sbjct: 161 ELAVNAVKTVI----ERDVLSGDGIDLVVIDKNG 190


>gi|397651896|ref|YP_006492477.1| proteasome subunit beta [Pyrococcus furiosus COM1]
 gi|393189487|gb|AFN04185.1| proteasome subunit beta [Pyrococcus furiosus COM1]
          Length = 203

 Score = 72.4 bits (176), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 18/167 (10%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLG 77
           +A +G   D+  L +LL A   +Y+    K+MS   +A LL+N L   ++FPY  + ++G
Sbjct: 50  IAGAGDVGDILNLVRLLKAEANLYKSTVGKEMSVKALATLLANILNGSKYFPYLGWFLVG 109

Query: 78  GLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLS 137
           G D + +  +++ D VG      Y++ GSG       LD++ +               +S
Sbjct: 110 GYDEKPR--LFSVDMVGGITEDNYAAAGSGMEFAYSILDSEYRE-------------EMS 154

Query: 138 EAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREY--MELRK 182
             + + L       A +RD++TGD L +V + K G ++EY   EL K
Sbjct: 155 VNDGIKLAVKAINVAIKRDVFTGDGLLVVTITKDG-YKEYRGAELEK 200


>gi|341581964|ref|YP_004762456.1| proteasome subunit beta 1 [Thermococcus sp. 4557]
 gi|340809622|gb|AEK72779.1| proteasome subunit beta 1 [Thermococcus sp. 4557]
          Length = 203

 Score = 72.4 bits (176), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 16/166 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   +A +G   D+ +L +LL A   +Y+ +  K+MS   +A L SN L+  RF PY+ +
Sbjct: 46  DHLALAGAGSVGDILSLVRLLRAEAKLYRAKVGKEMSVKALATLTSNVLHGSRFMPYFGW 105

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++ G  + G+  +Y+ D  G      +++ GSG       L+ + K    L        
Sbjct: 106 FLIAG--HTGEPGLYSVDMAGGVTEDRFTAAGSGMEFAFSILEAEFKENMTL-------- 155

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYME 179
                 E V L      +AT RD++TG  + +V +   G ++E+ E
Sbjct: 156 -----EEGVKLALRAIKAATRRDVFTGGGVTLVTVTDEG-YKEWSE 195


>gi|18977776|ref|NP_579133.1| proteasome subunit beta (multicatalytic endopeptidase complex beta
           subunit) [Pyrococcus furiosus DSM 3638]
 gi|25453238|sp|Q8U125.1|PSB2_PYRFU RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|18893519|gb|AAL81528.1| proteasome, subunit beta (multicatalytic endopeptidase complex beta
           subunit) [Pyrococcus furiosus DSM 3638]
          Length = 206

 Score = 72.4 bits (176), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 85/181 (46%), Gaps = 20/181 (11%)

Query: 1   MGSFFYILTSCRADKC----VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQ 56
           +G+  Y     +  K      +A +G   D+  L +LL A   +Y+    K+MS   +A 
Sbjct: 32  LGNIIYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLLKAEANLYKSTVGKEMSVKALAT 91

Query: 57  LLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLD 116
           LL+N L   ++FPY  + ++GG D + +  +++ D VG      Y++ GSG       LD
Sbjct: 92  LLANILNGSKYFPYLGWFLVGGYDEKPR--LFSVDMVGGITEDNYAAAGSGMEFAYSILD 149

Query: 117 NQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHRE 176
           ++ +               +S  + + L       A +RD++TGD L +V + K G ++E
Sbjct: 150 SEYRE-------------EMSVNDGIKLAVKAINVAIKRDVFTGDGLLVVTITKDG-YKE 195

Query: 177 Y 177
           Y
Sbjct: 196 Y 196


>gi|154150927|ref|YP_001404545.1| proteasome endopeptidase complex protein [Methanoregula boonei 6A8]
 gi|302595832|sp|A7I841.1|PSB_METB6 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|153999479|gb|ABS55902.1| Proteasome endopeptidase complex [Methanoregula boonei 6A8]
          Length = 213

 Score = 72.0 bits (175), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 84/159 (52%), Gaps = 15/159 (9%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           AD+  M  +G   D + L +++     +YQ + +++++    + LLSN L   R+FPYY 
Sbjct: 49  ADRIGMTIAGGVGDAQQLARIITVECNLYQIRRSREITVGAASTLLSNYLNQNRYFPYYV 108

Query: 73  FNVLGGLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
             ++GG+D+ G   VY+ DA+ G+ +     S GSGS +    L+++ +       P   
Sbjct: 109 QLLVGGIDDHGP-SVYSVDAMGGATKEEDIVSTGSGSPMAYGVLEDRYR-------PG-- 158

Query: 132 AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 170
               ++E EAV+L      SA +RD  +G+ + +VV+ K
Sbjct: 159 ----MNEDEAVELAVRALRSAMKRDAGSGEGIHVVVITK 193


>gi|161528202|ref|YP_001582028.1| proteasome endopeptidase complex protein [Nitrosopumilus maritimus
           SCM1]
 gi|302595718|sp|A9A4A1.1|PSB1_NITMS RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|160339503|gb|ABX12590.1| Proteasome endopeptidase complex [Nitrosopumilus maritimus SCM1]
          Length = 198

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 87/161 (54%), Gaps = 15/161 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G  AD++ L   +AA   I + +  + +    +A+++SN +Y +R+FP  +  ++GG+ 
Sbjct: 53  AGLVADMQILSLQIAALAKIRKMELKRDVPPNTVAKMMSNMMYERRYFPLLTQVIVGGVV 112

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
           +  K  +YT D +GS     Y++ G+G+ + +  LD Q K P+            +++ E
Sbjct: 113 D--KPIMYTLDPLGSVLPDEYAAVGTGAEMALGVLDPQFK-PN------------MTKDE 157

Query: 141 AVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELR 181
           A+DL K    +A+ RD  +GD ++++V+ K G      E++
Sbjct: 158 AIDLAKRAVRAASLRDSASGDGVDVLVITKDGTEEFTEEIK 198


>gi|320101454|ref|YP_004177046.1| proteasome endopeptidase complex subunit beta [Desulfurococcus
           mucosus DSM 2162]
 gi|319753806|gb|ADV65564.1| proteasome endopeptidase complex, beta component [Desulfurococcus
           mucosus DSM 2162]
          Length = 209

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 14/159 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   +  +G   DV  L K+L      Y+ QH +++    MA+LLS  LY  +  P  + 
Sbjct: 46  DHVGVGFAGLMGDVGFLVKVLRLEAKNYELQHGREIRARSMAKLLSLILYNYKLAPMLTE 105

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            V+GG D+EG   +Y  D VGS     Y + GSG+ L + +++ +  SPS  L       
Sbjct: 106 VVVGGFDDEGP-SLYILDPVGSLIEEKYVAVGSGAQLALGYIEPRY-SPSITL------- 156

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
                AEA +L      +  ERD+ +GD +++  + + G
Sbjct: 157 -----AEAEELAVNAIRTVVERDVLSGDGIDLATITRSG 190


>gi|332159619|ref|YP_004424898.1| proteasome beta subunit [Pyrococcus sp. NA2]
 gi|331035082|gb|AEC52894.1| proteasome beta subunit precursor [Pyrococcus sp. NA2]
          Length = 204

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 15/155 (9%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLG 77
           +A +G   D+  L +LL A   +Y  Q  ++MS   +A LL+N L   ++FPY ++ ++G
Sbjct: 50  IAGAGDVGDILNLVRLLRAEAKLYYAQFGREMSARALATLLANILNGYKYFPYMAWFLVG 109

Query: 78  GLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLS 137
           G D + +  +Y+ DAVG      Y + GSG       LD +                 ++
Sbjct: 110 GYDEKAR--LYSVDAVGGITEDKYMAAGSGMEFAYSILDAEYSD-------------DIT 154

Query: 138 EAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
             E V L      +A +RD+++GD + +V + K G
Sbjct: 155 VKEGVKLAVKAINTAIKRDVFSGDGILVVTITKEG 189


>gi|332158405|ref|YP_004423684.1| proteasome subunit beta [Pyrococcus sp. NA2]
 gi|331033868|gb|AEC51680.1| proteasome, subunit beta [Pyrococcus sp. NA2]
          Length = 216

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 16/168 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+  + ++G   DV+ + ++L A    YQ    + MS   MA LLSN L   R+FPY   
Sbjct: 64  DRIAITTAGSVGDVQMIARILEAEARYYQFTWGRPMSTKAMANLLSNILNENRWFPYLVQ 123

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++GG   E    +   D +G      Y++ GSG+   +  L+   +             
Sbjct: 124 IIIGGYVEE--PTIANLDPLGGLIFEDYTATGSGTPFALAILEEGYRK------------ 169

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGD-KLEIVVLNKGGIHREYMEL 180
             L   +A DL      +A  RD+YTG  K++++ + K G+  E+++L
Sbjct: 170 -NLGIEKAKDLAIKAIKAAGSRDVYTGSKKVQVMTITKDGMREEFVKL 216


>gi|156937409|ref|YP_001435205.1| proteasome endopeptidase complex protein [Ignicoccus hospitalis
           KIN4/I]
 gi|302595692|sp|A8AA46.1|PSB1_IGNH4 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|156566393|gb|ABU81798.1| Proteasome endopeptidase complex [Ignicoccus hospitalis KIN4/I]
          Length = 198

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 15/159 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+  MA +G  AD++A+ + L      Y+  + ++M     A+LL   LY  + FP  + 
Sbjct: 44  DRMGMACAGLYADMQAIARALENEIRYYEISNKRKMKVRSAARLLGLILYSNKLFPLMTE 103

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            V GG D+E +  ++  D VGS     YS+ G+G+ L M  LD + +             
Sbjct: 104 TVFGGYDDEPR--IFVLDPVGSVIEEKYSAVGTGAPLAMALLDKEYRE------------ 149

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
             +S  EA +L       A+ RD  +GD ++++V+  GG
Sbjct: 150 -DMSLEEAQNLAIESVKVASGRDSLSGDGIDVLVIPFGG 187


>gi|352682834|ref|YP_004893358.1| proteasome subunit beta [Thermoproteus tenax Kra 1]
 gi|350275633|emb|CCC82280.1| proteasome, beta subunit [Thermoproteus tenax Kra 1]
          Length = 204

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 78/156 (50%), Gaps = 14/156 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+  +AS+G  AD++ L K+L     +Y+    ++ S   MA+LLS  ++ +R+ P+ + 
Sbjct: 47  DRMAIASAGVIADMQTLAKILRVNAKMYELDAKRKPSVAAMAKLLSIIMFNRRWMPFIAE 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++GG D EG   V+  D VGS     Y++ G+G+ + +  LD+  K             
Sbjct: 107 VLVGGYDEEGP-HVFVLDPVGSLIEDDYAALGTGAKMAIGILDSGYKK------------ 153

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 169
             +   EA  L      +A ERD  +G  +++V++ 
Sbjct: 154 -DIDVVEARKLAINAIRAALERDPVSGGGIDLVIIT 188


>gi|268323699|emb|CBH37287.1| 20S proteasome, beta subunit [uncultured archaeon]
          Length = 210

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 86/175 (49%), Gaps = 19/175 (10%)

Query: 1   MGSFFYILTSCRA----DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQ 56
           MGSF    T+ +     D+  M ++G   D +AL +++     +Y+ + N+ M+  G++ 
Sbjct: 32  MGSFIASKTAKKIYLVDDRIAMTTAGIVGDAQALVRIMTVELQLYKIRRNEPMTVKGIST 91

Query: 57  LLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIMPFL 115
           LLSN +  +R++PY    ++GG+D +G   +YT D   G+ E    ++ GSGS +    L
Sbjct: 92  LLSNVMNGQRYYPYIVQLLIGGIDRDG-AHLYTIDPFGGNTEESEIAATGSGSPIAYGVL 150

Query: 116 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 170
           +N+                 +S  +   L      SA +RD  +G+ +E+V + K
Sbjct: 151 ENKYTK-------------DISLEKGTALAIQALYSAIKRDSASGEAIEVVTITK 192


>gi|345801204|ref|XP_003434786.1| PREDICTED: proteasome subunit beta type-1-like [Canis lupus
           familiaris]
          Length = 112

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/101 (41%), Positives = 58/101 (57%), Gaps = 4/101 (3%)

Query: 83  GKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAV 142
           G   VY++  VGSY+R  + + GS S ++   LDNQ+   +   +   + V  LS   A+
Sbjct: 9   GNMAVYSFGPVGSYQRDSFKAGGSASAMLQLLLDNQVGFKN---MQNVEHVL-LSLDRAM 64

Query: 143 DLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            LVK  F SA ERD+YTGD L I ++ K GI  E + LRKD
Sbjct: 65  RLVKDVFISAAERDVYTGDVLRICIVTKEGIREETVPLRKD 105


>gi|389852762|ref|YP_006354996.1| proteasome, subunit beta [Pyrococcus sp. ST04]
 gi|388250068|gb|AFK22921.1| putative proteasome, subunit beta [Pyrococcus sp. ST04]
          Length = 173

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 16/164 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           +   +A +G   D+ +L +LL A   +Y+    K MS   +A LL+N L   ++FPY+ +
Sbjct: 15  EHLAIAGAGDVGDILSLVRLLRAEARLYKANVGKPMSVKALATLLANILNGTKYFPYFVW 74

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++GG D E +  +++ D  G      Y + GSG       LD++ K             
Sbjct: 75  FLVGGYDEEPR--MFSVDMAGGVTEDKYVAAGSGMEFAYSVLDSEYKE------------ 120

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREY 177
             LS  E + L       A +RD+++GD + +V + + G ++EY
Sbjct: 121 -DLSVKEGIKLAVKAINVAIKRDVFSGDGILVVTITREG-YQEY 162


>gi|355571914|ref|ZP_09043122.1| proteasome endopeptidase complex, beta subunit [Methanolinea tarda
           NOBI-1]
 gi|354825010|gb|EHF09245.1| proteasome endopeptidase complex, beta subunit [Methanolinea tarda
           NOBI-1]
          Length = 213

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 16/168 (9%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           AD+  M ++G   D + + +L+     +YQ +  + ++   +A LLSN L   R++P+Y 
Sbjct: 49  ADRIGMTTAGGVGDAQQIARLMTVECSLYQIRRGRPITIGAVATLLSNILNANRYYPFYV 108

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYER-VGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
             ++GG+D EG   +Y  DA+G   R     + GSGS +    L+++             
Sbjct: 109 QLLVGGVD-EGGPKLYAVDALGGASREEEMVATGSGSPMAFGVLEDRYSK---------- 157

Query: 132 AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYME 179
               LSE EAV L      SA +RD  +G+ + +VV+ K   +RE  E
Sbjct: 158 ---DLSEDEAVALAVRAIRSAMKRDAGSGEGIHVVVITKEA-YRELTE 201


>gi|325967588|ref|YP_004243780.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
 gi|323706791|gb|ADY00278.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
          Length = 205

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 14/168 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   MAS G  AD++ L K+  A   +Y      + S    A+LLS  L+  R  PY+  
Sbjct: 48  DNIGMASIGILADMQVLTKIAKAYMSLYSLDTKTRPSIRSAAKLLSYVLFSNRILPYFVE 107

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++GG+D+EG   ++  DA+GS     Y++ G+G+ L +  L++  K       P     
Sbjct: 108 VLVGGIDDEGP-HLFIMDALGSLIEDDYAAVGTGTKLAIAILESNYK-------PG---- 155

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELR 181
             +S  EA DL       +  RD  +GD ++I+ +   G   E + L+
Sbjct: 156 --MSIKEARDLAIKAINQSISRDPVSGDGIDILTITGNGSTEETIPLQ 201


>gi|305664308|ref|YP_003860596.1| proteasome endopeptidase complex subunit beta [Ignisphaera
           aggregans DSM 17230]
 gi|304378877|gb|ADM28716.1| proteasome endopeptidase complex, beta subunit [Ignisphaera
           aggregans DSM 17230]
          Length = 200

 Score = 70.1 bits (170), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 85/168 (50%), Gaps = 14/168 (8%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           AD  V+A++G  AD+++L ++++A  +  +   + +M     A+LLS  LY  +  P+ S
Sbjct: 47  ADHMVIAAAGLFADMQSLSRIISAEIMYRELLSSSKMRVRAAAKLLSAILYSYKLMPFLS 106

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
             +  G D EG   +Y  D VGS     Y++ G+G+++ +  ++++ K+           
Sbjct: 107 EIIFAGFDEEGY-HLYVLDPVGSIIEDDYAAIGTGASIAIGVIESEYKN----------- 154

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMEL 180
              L+  +A +L      +A  RD  +GD ++I V+   GI+   + L
Sbjct: 155 --TLTIDQATELAIKSVKAAISRDAVSGDGIDIAVVTNNGINERSILL 200


>gi|347522758|ref|YP_004780328.1| proteasome endopeptidase complex subunit beta [Pyrolobus fumarii
           1A]
 gi|343459640|gb|AEM38076.1| proteasome endopeptidase complex, beta subunit [Pyrolobus fumarii
           1A]
          Length = 211

 Score = 70.1 bits (170), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 78/157 (49%), Gaps = 14/157 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+  +A +G  AD++AL ++L+A    Y+    K       A+LLSN LY  +  P+ + 
Sbjct: 48  DRIGIAFAGLYADMQALARILSAEIQYYEVSTGKPARVYAAAKLLSNILYASKLIPFITE 107

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++GG+D  G   +Y  D VGS     Y++ GSG+ + +  L+   +             
Sbjct: 108 VLVGGVDETGS-HLYVMDPVGSVIEDDYAALGSGAAIAIGILEANYRK------------ 154

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 170
             +S  EA +L +     A ERD  +GD ++I+V+ +
Sbjct: 155 -DMSIDEAKELAEKAVRIAIERDAISGDGIDILVIKR 190


>gi|284161559|ref|YP_003400182.1| Proteasome endopeptidase complex [Archaeoglobus profundus DSM 5631]
 gi|302595818|sp|D2RGT4.1|PSB_ARCPA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|284011556|gb|ADB57509.1| Proteasome endopeptidase complex [Archaeoglobus profundus DSM 5631]
          Length = 215

 Score = 69.7 bits (169), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 21/173 (12%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           AD+  M ++G   D + L +L++    +Y+ +  ++ +   +A LLSN L   R+FPY+ 
Sbjct: 50  ADRVAMTTAGAVGDAQFLARLISVEIKLYEIRKEEKPTVKAIATLLSNILNSVRWFPYFV 109

Query: 73  FNVLGGLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
             ++GG+D  G   +Y+ D + G+ E +   + GSGS      L              +D
Sbjct: 110 QLLVGGVDKRGP-SIYSIDLLGGAIEEIDIVATGSGSPTAYGVL--------------ED 154

Query: 132 AVTP-LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             TP ++  + V+L      SA  RD  +GD +++V + K G    Y EL K+
Sbjct: 155 RYTPEITVDDGVELAVRAIYSAMRRDSASGDGIDVVKITKDG----YFELSKE 203


>gi|124028410|ref|YP_001013730.1| proteasome beta subunit [Hyperthermus butylicus DSM 5456]
 gi|302595717|sp|A2BN24.1|PSB1_HYPBU RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|123979104|gb|ABM81385.1| proteasome beta subunit [Hyperthermus butylicus DSM 5456]
          Length = 204

 Score = 69.3 bits (168), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 80/157 (50%), Gaps = 13/157 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   +A +G  AD++A+ K+L A    Y     +++S   +A+LL+  LY  +++P+ S 
Sbjct: 47  DYLGLALAGLFADLQAISKILRAEIEYYNIVTGRRISVRAVARLLATILYSYKYYPFLSE 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++GGL+ +G   +Y  D +GS     Y++ GSG+ + +  L+N                
Sbjct: 107 TLVGGLEADGTAKLYVMDPLGSLIEDDYAAIGSGAPIAIGILENGYSK------------ 154

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 170
             +S  +A  L      +A ERD  +GD ++++V+ +
Sbjct: 155 -DMSVDDAKKLAIAAVRAAIERDAMSGDGIDLLVIRR 190


>gi|328875472|gb|EGG23836.1| proteasome subunit beta type 3 [Dictyostelium fasciculatum]
          Length = 201

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 12/170 (7%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DKC +  SG   D + L + L  RH +Y+ +  + M+   ++ L+ N LY KRF PY++ 
Sbjct: 44  DKCFIGISGLVTDAQTLYQKLVFRHNLYKLREERDMTPQVLSNLVGNMLYEKRFGPYFTE 103

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            V+ GLD + K  +   D +G+            S     FL     +P+   L      
Sbjct: 104 PVICGLDTQDKPFISGMDLIGA------------SVYTEDFLLVGTMTPAMYGLCETLYK 151

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             ++E E  + V  C  S+ ERD  +G   E+ ++     +++ +  R+D
Sbjct: 152 KDMNEDELFETVSQCMLSSIERDAMSGWGAEVTIITPAKTYKKKLLARQD 201


>gi|327311727|ref|YP_004338624.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
 gi|326948206|gb|AEA13312.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
          Length = 204

 Score = 68.9 bits (167), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 86/167 (51%), Gaps = 14/167 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+  +AS+G  AD++ + K+L     +Y+ +  ++ S   MA+LLS  ++ +R  P+ + 
Sbjct: 47  DRMALASAGVIADMQTIAKILRVNAKMYELESRRKPSIAAMAKLLSVIMFNRRIMPFIAE 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++GG D EG   ++  D VGS     Y++ G+G+ + +  LD            ++D  
Sbjct: 107 VLVGGYDEEGP-HIFVLDPVGSLIEDDYAALGTGAKMAISILDANY---------SKDVD 156

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMEL 180
              +   A++ ++    +A ERD  +G  +++V +   G+  E +++
Sbjct: 157 VSGARKLAINAIR----AALERDPVSGGGIDLVTVTADGVSEEEIKV 199


>gi|296242989|ref|YP_003650476.1| proteasome endopeptidase complex subunit beta [Thermosphaera
           aggregans DSM 11486]
 gi|296095573|gb|ADG91524.1| proteasome endopeptidase complex, beta component [Thermosphaera
           aggregans DSM 11486]
          Length = 202

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 14/152 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G   DV  L+++L      Y+ QH +++   G+A++LS  LY  +  P  +  V+GG D
Sbjct: 51  AGLMGDVNILKRMLEMEAKYYELQHGREIRVRGLAKMLSVILYSYKLAPMLTEIVVGGYD 110

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
           + G   +Y  D VGS     Y++ GSG+ L + +++           P  +    L EAE
Sbjct: 111 DNGP-QLYILDPVGSLIEEKYAALGSGAQLALGYIE-----------PRYNPDISLEEAE 158

Query: 141 AVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
              LV     +  ERD+ +GD ++I+ +   G
Sbjct: 159 --KLVVEAVKTVIERDVLSGDGVDILKITAKG 188


>gi|254168241|ref|ZP_04875087.1| peptidase, T1 family [Aciduliprofundum boonei T469]
 gi|254168404|ref|ZP_04875249.1| peptidase, T1 family [Aciduliprofundum boonei T469]
 gi|289595801|ref|YP_003482497.1| proteasome endopeptidase complex, beta subunit [Aciduliprofundum
           boonei T469]
 gi|302595865|sp|B5IEE5.1|PSB_ACIB4 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|197622685|gb|EDY35255.1| peptidase, T1 family [Aciduliprofundum boonei T469]
 gi|197622750|gb|EDY35319.1| peptidase, T1 family [Aciduliprofundum boonei T469]
 gi|289533588|gb|ADD07935.1| proteasome endopeptidase complex, beta subunit [Aciduliprofundum
           boonei T469]
          Length = 210

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 14/153 (9%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLG 77
           M ++G   D++ L + + A   +Y+ +    M     A LLSN L  ++FFPYY   ++G
Sbjct: 50  MTTAGLVGDLQVLVRYMRAEINLYRIRRKMYMPVGAAATLLSNILNERKFFPYYVGLLVG 109

Query: 78  GLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLS 137
           G D++G   V+  DA G      Y+S GSGS  +   L+++ K               LS
Sbjct: 110 GFDSKGY-HVFAIDAAGGAIEDKYASVGSGSLFVYGVLEDRWKD-------------DLS 155

Query: 138 EAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 170
             E ++LV     +A  RD  +GD + +  + K
Sbjct: 156 LDEGINLVIRGINAAMRRDAASGDGISVATITK 188


>gi|219851431|ref|YP_002465863.1| proteasome beta-type subunit [Methanosphaerula palustris E1-9c]
 gi|302595895|sp|B8GG66.1|PSB_METPE RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|219545690|gb|ACL16140.1| Proteasome, beta-type subunit, conserved site [Methanosphaerula
           palustris E1-9c]
          Length = 211

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 15/159 (9%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           AD+  M ++G   D + L ++++    +YQ +  + +S    + LLSN L   R +PYY 
Sbjct: 47  ADRIGMTTAGGVGDAQQLARIMSVECNLYQIRRGRSISVGASSTLLSNYLNQNRGYPYYV 106

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVG-YSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
             ++GG+D  G   VY+ DA+G   R     + GSGS +    L+++ K           
Sbjct: 107 QLLVGGVDATGP-SVYSVDAMGGATRESDIVATGSGSPMAYGVLEDRYKK---------- 155

Query: 132 AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 170
               L+E EA++L      +A  RD  +G+ + +V++ K
Sbjct: 156 ---DLTEDEAIELAIRALRAAMRRDSASGEGIHVVIITK 191


>gi|14520958|ref|NP_126433.1| proteasome, subunit beta [Pyrococcus abyssi GE5]
 gi|17380268|sp|Q9V0N9.1|PSB2_PYRAB RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|5458175|emb|CAB49664.1| psmB-like proteasome, subunit beta [Pyrococcus abyssi GE5]
 gi|380741512|tpe|CCE70146.1| TPA: proteasome, subunit beta [Pyrococcus abyssi GE5]
          Length = 207

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 16/159 (10%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLG 77
           +A +G   D+  L +LL A   +Y  Q  K+MS   +A LL+N L   R  PY ++ ++G
Sbjct: 53  IAGAGDVGDILNLVRLLRAEAKLYYAQSGKRMSVKALATLLANMLNGARMLPYLAWFLVG 112

Query: 78  GLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLS 137
           G D + +  +Y+ D +G      Y + GSG       LD++ +               L 
Sbjct: 113 GFDEKPR--LYSVDMMGGITEDKYVAAGSGMEFAYSVLDSEYRE-------------DLK 157

Query: 138 EAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHRE 176
             E + +      SA +RD+++GD + +V + + G +RE
Sbjct: 158 VREGIKIAVEAINSAIKRDVFSGDGIMVVTITEEG-YRE 195


>gi|432328820|ref|YP_007246964.1| proteasome endopeptidase complex, archaeal, beta subunit
           [Aciduliprofundum sp. MAR08-339]
 gi|432135529|gb|AGB04798.1| proteasome endopeptidase complex, archaeal, beta subunit
           [Aciduliprofundum sp. MAR08-339]
          Length = 225

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 75/163 (46%), Gaps = 17/163 (10%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLG 77
           M ++G   D++ L + + A   +Y+ +    M     A LLSN L  ++FFPYY   ++G
Sbjct: 65  MTTAGLVGDLQVLVRYMRAEINLYRIRRKMYMPVGAAATLLSNILNERKFFPYYVGLLVG 124

Query: 78  GLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLS 137
           G D+ G   VY  DA G      Y+S GSGS  +   L+++      L            
Sbjct: 125 GFDDRGY-HVYAIDAAGGAIEDKYASVGSGSLFVYGVLEDRWHDDIGL------------ 171

Query: 138 EAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMEL 180
             E ++LV     +A  RD  +GD + +  + K    R ++EL
Sbjct: 172 -DEGIELVIRGINAAMRRDAASGDGISVATITK---ERGFVEL 210


>gi|307353377|ref|YP_003894428.1| proteasome endopeptidase complex subunit beta [Methanoplanus
           petrolearius DSM 11571]
 gi|307156610|gb|ADN35990.1| proteasome endopeptidase complex, beta subunit [Methanoplanus
           petrolearius DSM 11571]
          Length = 209

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 16/168 (9%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           AD+  M ++G   D + L + +     +Y  +  ++MS    A LLSN L   R  PYY 
Sbjct: 52  ADRIGMTTAGGVGDAQQLARWVQVECSLYNIRRGREMSVGASASLLSNILNNNRMMPYYV 111

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYE-RVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
             ++GG+D+ G   +Y+ DA+G         + GSGS      L+++ +   P       
Sbjct: 112 QLLVGGVDSGGP-SIYSVDALGGASPEDDIVATGSGSPFAYGVLEDRFEKGMP------- 163

Query: 132 AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYME 179
                 E + VDL      SA  RD  +G+ + +VV+ K   + E+ME
Sbjct: 164 ------EKDCVDLAIRALRSAMRRDSASGEDISVVVITKDK-YEEFME 204


>gi|14590176|ref|NP_142241.1| proteasome subunit beta [Pyrococcus horikoshii OT3]
 gi|74570532|sp|O57983.1|PSB1_PYRHO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|3256634|dbj|BAA29317.1| 197aa long hypothetical proteasome beta subunit [Pyrococcus
           horikoshii OT3]
          Length = 197

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 16/168 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+  + ++G   DV+ + ++L A    Y     + M+   MA LLSN L   ++FPY   
Sbjct: 45  DRIAITTAGSVGDVQMIARILEAEARYYYFAWGRPMTTKAMANLLSNILNENKWFPYLVQ 104

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++GG  +E    +   D  G      Y++ GSG+   +  L+   K             
Sbjct: 105 IIIGGYVDE--PTIANLDPYGGLIFDNYTATGSGTPFAIAILEEGYKE------------ 150

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGD-KLEIVVLNKGGIHREYMEL 180
             L   EA +L      +A  RD+YTG  K+++V + K G+  E+++L
Sbjct: 151 -NLGIEEAKELAIKAIKAAGSRDVYTGSKKVQVVTITKEGMQEEFIKL 197


>gi|255513744|gb|EET90009.1| Proteasome endopeptidase complex [Candidatus Micrarchaeum
           acidiphilum ARMAN-2]
          Length = 210

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 16/163 (9%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLG 77
           M  +G   D + L ++L  ++ IY+    KQMS    A LLS  L   +  P+Y   ++G
Sbjct: 55  MTIAGLVGDAQELIRILKIQNEIYKMNERKQMSPRSAATLLSIILQENKMMPFYVQLIVG 114

Query: 78  GLDNEGKGCVYTYDAVGSY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPL 136
           G++ +GKG VY  DA G Y +   +++ GSGS   + +L++  K       P       L
Sbjct: 115 GVE-DGKGYVYNLDAAGGYTQESRFTATGSGSLTALGYLEDSYK-------PG------L 160

Query: 137 SEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYME 179
           +  +A+ +       A +RD  TG+ + I  +   G + EY +
Sbjct: 161 TTKDAIKIAAKALLIAMQRDSATGNNMTIAAITSRG-YEEYTQ 202


>gi|408404298|ref|YP_006862281.1| proteasome subunit beta [Candidatus Nitrososphaera gargensis Ga9.2]
 gi|408364894|gb|AFU58624.1| proteasome, subunit beta [Candidatus Nitrososphaera gargensis
           Ga9.2]
          Length = 201

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 89/168 (52%), Gaps = 15/168 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D    A +G  AD++ L + + A   I + +  + ++   +A+L+S  ++ +R+FP  + 
Sbjct: 47  DHVGAACAGMVADMQVLVRQVEALAKIRKLETRRDVAPNSIAKLMSVIMFERRYFPLLTQ 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++GG++   K  +YT D +GS     Y++ G+G+ + +  +D + K P+          
Sbjct: 107 VIVGGINT--KPEIYTLDPLGSVLPDDYAAVGTGAEMALGIMDAEFK-PN---------- 153

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELR 181
             ++E +A +L      SA +RD  +GD ++++V+++ G   E + +R
Sbjct: 154 --MTEEKAKELAVRAIRSAIQRDAASGDGIDVLVVSRTGHREETIPIR 199


>gi|14520445|ref|NP_125920.1| proteasome, subunit beta [Pyrococcus abyssi GE5]
 gi|74558522|sp|Q9V247.1|PSB1_PYRAB RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|5457660|emb|CAB49151.1| psmB proteasome, subunit beta [Pyrococcus abyssi GE5]
 gi|380740969|tpe|CCE69603.1| TPA: proteasome, subunit beta [Pyrococcus abyssi GE5]
          Length = 197

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 78/168 (46%), Gaps = 16/168 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+  + ++G   DV+ + ++L A    YQ    + M+   MA LLSN L   ++FPY   
Sbjct: 45  DRIAITTAGSVGDVQMIARILEAEARYYQFTWGRPMTTRAMANLLSNILNENKWFPYLVQ 104

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++GG  +E    +   D +G      Y++ GSG+   +  L+   +             
Sbjct: 105 IIIGGYVDE--PTIANLDPLGGLIFDDYTATGSGTPFAIAILEEGYRK------------ 150

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGD-KLEIVVLNKGGIHREYMEL 180
             L   +A +L      +A  RD+YTG  K+++V + K G+  E++ L
Sbjct: 151 -NLGIEKAKELAIKAVKAAGARDVYTGSKKIQVVTITKDGMKEEFVTL 197


>gi|227828116|ref|YP_002829896.1| proteasome endopeptidase complex protein [Sulfolobus islandicus
           M.14.25]
 gi|227830823|ref|YP_002832603.1| proteasome beta-type subunit [Sulfolobus islandicus L.S.2.15]
 gi|229579719|ref|YP_002838118.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.G.57.14]
 gi|229581613|ref|YP_002840012.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
 gi|229585355|ref|YP_002843857.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.27]
 gi|238620316|ref|YP_002915142.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.4]
 gi|284998338|ref|YP_003420106.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
 gi|385773795|ref|YP_005646362.1| Proteasome endopeptidase complex [Sulfolobus islandicus HVE10/4]
 gi|385776430|ref|YP_005648998.1| Proteasome endopeptidase complex [Sulfolobus islandicus REY15A]
 gi|302595724|sp|D2PDG6.1|PSB2_SULID RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|302595743|sp|C3MZI0.1|PSB2_SULIA RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|302595744|sp|C4KIR0.1|PSB2_SULIK RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|302595746|sp|C3NFX2.1|PSB1_SULIN RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|302595751|sp|C3MRE5.1|PSB2_SULIL RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|302595758|sp|C3MY41.1|PSB2_SULIM RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|302595897|sp|C3N7K2.1|PSB2_SULIY RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|227457271|gb|ACP35958.1| Proteasome, beta-type subunit, conserved site [Sulfolobus
           islandicus L.S.2.15]
 gi|227459912|gb|ACP38598.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.14.25]
 gi|228010434|gb|ACP46196.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.G.57.14]
 gi|228012329|gb|ACP48090.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
 gi|228020405|gb|ACP55812.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.27]
 gi|238381386|gb|ACR42474.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.4]
 gi|284446234|gb|ADB87736.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
 gi|323475178|gb|ADX85784.1| Proteasome endopeptidase complex [Sulfolobus islandicus REY15A]
 gi|323477910|gb|ADX83148.1| Proteasome endopeptidase complex [Sulfolobus islandicus HVE10/4]
          Length = 196

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 79/161 (49%), Gaps = 14/161 (8%)

Query: 12  RADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYY 71
           +  K +MA +G   D++ L +++      Y+    K +S    A+LLS  LY  +  P+ 
Sbjct: 41  KIGKFLMAGAGIYGDLQTLTRIMNVEIKYYEISTGKPISVHAAAKLLSVILYQYKVMPFI 100

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
           S  + GG+D +G   +Y  D +GS     Y++ GSG+ + +  L+++      L + AQ 
Sbjct: 101 SEILFGGVDEKGP-QLYVLDPIGSLIEDNYAAVGSGARIAIGVLESEYDPNMNLDIAAQ- 158

Query: 132 AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
                       L+     ++ ERDI +GD +++ +++K G
Sbjct: 159 ------------LITKAIKASIERDITSGDGIDLAIMDKKG 187


>gi|432331212|ref|YP_007249355.1| proteasome endopeptidase complex, archaeal, beta subunit
           [Methanoregula formicicum SMSP]
 gi|432137921|gb|AGB02848.1| proteasome endopeptidase complex, archaeal, beta subunit
           [Methanoregula formicicum SMSP]
          Length = 213

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 82/159 (51%), Gaps = 15/159 (9%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           AD+  M ++G   D + L ++L     +YQ + ++ ++    A LLSN L   R+FPYY 
Sbjct: 49  ADRIGMTTAGGVGDAQQLARILNVECNLYQIRRSRPITVGATATLLSNYLNQNRYFPYYV 108

Query: 73  FNVLGGLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
             ++GG+D +G   VY+ DA+ G+ +     + GSGS +    L+++ K       P   
Sbjct: 109 QLLVGGVDEKGP-SVYSVDAMGGATKEEEIVATGSGSPMAYGVLEDRYK-------PG-- 158

Query: 132 AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 170
               ++E  A+++      SA +RD  +G+ + +V + K
Sbjct: 159 ----MTEEMAIEIAVRGLKSAMKRDAGSGEGIHVVAITK 193


>gi|170291074|ref|YP_001737890.1| proteasome endopeptidase complex protein [Candidatus Korarchaeum
           cryptofilum OPF8]
 gi|302595814|sp|B1L6X8.1|PSB2_KORCO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|170175154|gb|ACB08207.1| Proteasome endopeptidase complex [Candidatus Korarchaeum
           cryptofilum OPF8]
          Length = 198

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 82/169 (48%), Gaps = 15/169 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFP-YYS 72
           ++  ++++G   D + L  +L     +Y+ ++ K  +   +A+LLS  LY  RF   YY+
Sbjct: 42  ERVGVSTAGLPGDFQELVDVLKYNITMYELENEKAATPTNVAKLLSILLYQGRFSGIYYA 101

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
             V+GG+DN G   ++  D  G      +S+ GSG+ +    L+   K            
Sbjct: 102 ELVVGGIDNSGP-KIFVLDPAGGLMEENFSAVGSGAQIATGILERFFKEG---------- 150

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELR 181
              +SE EAV+L +     A  RD  +GD ++++++   G   E++ +R
Sbjct: 151 ---MSEKEAVELAERAMREAISRDALSGDGIDLLIITSKGSRMEFIPVR 196


>gi|195421055|ref|XP_002060834.1| GK20619 [Drosophila willistoni]
 gi|194156919|gb|EDW71820.1| GK20619 [Drosophila willistoni]
          Length = 229

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 22/174 (12%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCP-GMAQLLSNTLYYKRFFPYYSF 73
           + V+ S G   D  AL  L+ +  L Y+   N    CP  +A +L+ T + ++   Y+  
Sbjct: 69  QTVLGSVGCWCDTLALLSLVRSYSLKYELD-NLMPVCPDSLASMLTRTKFTRQ---YFVS 124

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLD-------NQLKSPSPLL 126
           +V+ G+D+ G G VY  D  G+Y R+ Y   G+G  +I+P LD       +Q+ +     
Sbjct: 125 SVVAGIDSNGLGAVYFNDPSGNYLRLPYHISGTGGRIILPTLDWFEGNEEDQMNA----- 179

Query: 127 LPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMEL 180
                  T L+  +AV++    F +A +RDI+ G+ + I ++ + G+  + + L
Sbjct: 180 -----ITTSLTVDKAVEISMEAFRTARDRDIFIGNCMFINIITREGVQFKQLPL 228


>gi|15920523|ref|NP_376192.1| proteasome subunit beta [Sulfolobus tokodaii str. 7]
 gi|74574822|sp|Q975U8.1|PSB1_SULTO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|15621306|dbj|BAB65301.1| proteasome beta subunit [Sulfolobus tokodaii str. 7]
          Length = 197

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 81/159 (50%), Gaps = 14/159 (8%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLG 77
           +A +G   D++ L +L+      Y+  +NK +S    A+LLS  LY  ++ P+ S  + G
Sbjct: 47  IAGAGIMGDIQTLTRLMNVEIKYYEMYNNKPISVKAAAKLLSVILYQYKWTPFISELLFG 106

Query: 78  GLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLS 137
           G+D+EG   ++  D +GS     Y++ GSG+ + +  L+++   PS            ++
Sbjct: 107 GVDDEGP-KLFVLDPIGSLIEDNYAAVGSGARVAIGVLESEY-DPS------------MN 152

Query: 138 EAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHRE 176
             +  ++V     +A ERD+ +GD ++I+ + +     E
Sbjct: 153 LDKGKEIVLKALKAAIERDVTSGDGIDILTIKRDNTSSE 191


>gi|15897221|ref|NP_341826.1| proteasome subunit [Sulfolobus solfataricus P2]
 gi|284174466|ref|ZP_06388435.1| proteasome subunit [Sulfolobus solfataricus 98/2]
 gi|384433733|ref|YP_005643091.1| proteasome endopeptidase complex subunit beta [Sulfolobus
           solfataricus 98/2]
 gi|74557429|sp|Q980L4.1|PSB1_SULSO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|302595697|sp|D0KRX1.1|PSB1_SULS9 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|13813418|gb|AAK40616.1| Proteasome subunit [Sulfolobus solfataricus P2]
 gi|261601887|gb|ACX91490.1| proteasome endopeptidase complex, beta subunit [Sulfolobus
           solfataricus 98/2]
          Length = 196

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 79/161 (49%), Gaps = 14/161 (8%)

Query: 12  RADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYY 71
           + +K +MA +G   D++ L +++      Y+    K +S    A+LLS  LY  +  P+ 
Sbjct: 41  KINKFLMAGAGIYGDLQTLTRIMNVEIKYYEVSTGKPISVHAAAKLLSVILYQYKVMPFI 100

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
           S  + GG+D +G   +Y  D +GS     Y++ GSG+ + +  L+++      L +  Q 
Sbjct: 101 SEILFGGVDEKGP-QLYVLDPIGSLIEDNYAAVGSGARIAIGVLESEYDPNMSLDVATQ- 158

Query: 132 AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
                       L+     ++ ERDI +GD +++ +++K G
Sbjct: 159 ------------LITKAIKASIERDITSGDGIDLAIIDKKG 187


>gi|397780986|ref|YP_006545459.1| proteasome beta subunit [Methanoculleus bourgensis MS2]
 gi|396939488|emb|CCJ36743.1| proteasome beta subunit [Methanoculleus bourgensis MS2]
          Length = 214

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 74/154 (48%), Gaps = 15/154 (9%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLG 77
           M ++G   D + L +++     +Y+ +  + MS    + LLSN L   R++PYY   ++G
Sbjct: 54  MTTAGGVGDAQQLVRIIQVECSLYEMRRGRTMSVGAASTLLSNYLNQNRYYPYYVQLLMG 113

Query: 78  GLDNEGKGCVYTYDAVGSYER-VGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPL 136
           G D EG   VY+ DA+G   R     + GSGS      L++Q +               +
Sbjct: 114 GFD-EGGPSVYSVDAMGGATREEEIVATGSGSPFAYGVLEDQYRP-------------DM 159

Query: 137 SEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 170
           +E EA DL      SA  RD  +G+ + +VV+ K
Sbjct: 160 TEEEAKDLAIRAVRSAMRRDAGSGENIMVVVIMK 193


>gi|337285369|ref|YP_004624843.1| proteasome subunit beta [Pyrococcus yayanosii CH1]
 gi|334901303|gb|AEH25571.1| proteasome, subunit beta [Pyrococcus yayanosii CH1]
          Length = 197

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 17/165 (10%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+  + ++G   DV+ L ++L      YQ    + MS   MA LLSN L   ++FPY   
Sbjct: 45  DRIAITTAGSVGDVQMLARILEVEARYYQFTWGRPMSTRAMANLLSNILNENKWFPYLVQ 104

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            V+GG   E    +   D +G      Y++ GSGS   +  L++  +             
Sbjct: 105 IVIGGYVEE--PVIANLDPLGGLIFDDYTATGSGSPFAIAVLEDGYRK------------ 150

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGD-KLEIVVLNKGGIHREY 177
             +   EA +L       A +RD+YTG  K+++V + K G+ REY
Sbjct: 151 -DMGIEEAKELAVKAVKVAGKRDVYTGSRKVQVVTITKEGM-REY 193


>gi|336121951|ref|YP_004576726.1| proteasome endopeptidase complex subunit beta [Methanothermococcus
           okinawensis IH1]
 gi|334856472|gb|AEH06948.1| proteasome endopeptidase complex, beta subunit [Methanothermococcus
           okinawensis IH1]
          Length = 220

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 77/161 (47%), Gaps = 14/161 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   M  +G   D ++L ++++A   IY+ +    M     A LLSN L+  R FP+ + 
Sbjct: 52  DYIAMTIAGSVGDAQSLVRMISAETKIYKMRTGNNMPPHSCATLLSNILHGNRHFPFLTQ 111

Query: 74  NVLGGLDNEGKGCVYTYDAVGSY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            ++GG DN     +++ D VG   E   ++S GSGS   +  L+ + K            
Sbjct: 112 LIIGGYDNLHGPKLFSLDPVGGLNEETSFTSTGSGSPTALGVLEAEYKK----------- 160

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
              ++  +  +L      SA ERD Y+G+ + + V+++ G+
Sbjct: 161 --DMTINKGKELAVKALISAMERDAYSGNGISLAVIDENGV 199


>gi|288931294|ref|YP_003435354.1| proteasome endopeptidase complex subunit beta [Ferroglobus placidus
           DSM 10642]
 gi|302595823|sp|D3RX66.1|PSB_FERPA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|288893542|gb|ADC65079.1| proteasome endopeptidase complex, beta subunit [Ferroglobus
           placidus DSM 10642]
          Length = 210

 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 90/188 (47%), Gaps = 29/188 (15%)

Query: 1   MGSFFYILTSCRA-------DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPG 53
           MG+F   + S RA       D+  M ++G   D + L +L+     +Y  +  ++ +   
Sbjct: 31  MGNF---IASRRAKKIYKITDRIAMTTAGSVGDAQFLARLIKVETNLYTIRKEEEPTVKA 87

Query: 54  MAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIM 112
           +A L+SN L   R+FPY    ++GG+D  G   +Y+ D + G+ E +   + GSGS +  
Sbjct: 88  VATLVSNLLNSVRYFPYLVQLLIGGVDKTG-AKIYSIDPIGGAIEEIDIVATGSGSPMAY 146

Query: 113 PFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
             L++  +               ++  EAV+L      SA +RD  +GD +++V +    
Sbjct: 147 GVLEDNYRK-------------DINVDEAVELAIRAIYSAMKRDSASGDGIDVVKIT--- 190

Query: 173 IHREYMEL 180
             +EY+EL
Sbjct: 191 -EKEYVEL 197


>gi|374628281|ref|ZP_09700666.1| proteasome endopeptidase complex, beta subunit [Methanoplanus
           limicola DSM 2279]
 gi|373906394|gb|EHQ34498.1| proteasome endopeptidase complex, beta subunit [Methanoplanus
           limicola DSM 2279]
          Length = 206

 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 20/170 (11%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           AD+  M  +G   D + L +L+     ++  +  + ++    A LLSN L   R FPYY 
Sbjct: 49  ADRIGMTIAGGVGDAQQLARLMQVECSLFNIRRGRPIAVGAAATLLSNVLNQNRMFPYYV 108

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSY---ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA 129
             ++GG+D  G   +Y+ DA+G     +R+   + GSGS      L+++ +         
Sbjct: 109 QLLVGGIDRYGP-SIYSVDALGGASPEDRI--VATGSGSPFAYGVLEDRFEE-------- 157

Query: 130 QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYME 179
                 +SE E +DL      SA +RD  +G+ + IVV+ K   + E ME
Sbjct: 158 -----GMSEKECLDLAIRALRSAMKRDSASGEDISIVVITKDK-YEELME 201


>gi|156937771|ref|YP_001435567.1| proteasome endopeptidase complex protein [Ignicoccus hospitalis
           KIN4/I]
 gi|302595716|sp|A8AB58.1|PSB2_IGNH4 RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|156566755|gb|ABU82160.1| Proteasome endopeptidase complex [Ignicoccus hospitalis KIN4/I]
          Length = 212

 Score = 66.2 bits (160), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 15/168 (8%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           +D   M ++G  AD + L  +L      Y+  H K+MS    A  LSN L+  RF+PY  
Sbjct: 51  SDYMAMTTAGLVADAQVLADVLRMEVKNYELFHKKRMSVKAAATFLSNVLHSARFYPYIV 110

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
             ++GG D   +  +Y+ D  G+     +   GSGS + +  ++ +         P  D 
Sbjct: 111 QLLVGGFDTAPR--LYSLDWFGTVAEEEFLVTGSGSPMAVGVIEAEYN-------PNMDL 161

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMEL 180
                  E V+L      +AT RD  +G+ +++ V+++ GI   +  L
Sbjct: 162 ------EELVNLAVRAVFAATRRDTASGEGIDVAVIDRNGITMRHYRL 203


>gi|18976531|ref|NP_577888.1| multicatalytic endopeptidase complex beta subunit [Pyrococcus
           furiosus DSM 3638]
 gi|397652128|ref|YP_006492709.1| proteasome subunit beta [Pyrococcus furiosus COM1]
 gi|74552258|sp|Q8U4C9.1|PSB1_PYRFU RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|18892084|gb|AAL80283.1| proteasome, subunit beta (multicatalytic endopeptidase complex beta
           subunit) [Pyrococcus furiosus DSM 3638]
 gi|393189719|gb|AFN04417.1| proteasome subunit beta [Pyrococcus furiosus COM1]
          Length = 196

 Score = 65.9 bits (159), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 16/166 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+  + ++G   DV+ L + L A    Y     + M+   MA LLSN L   R+FPY   
Sbjct: 45  DRIAITTAGSVGDVQMLARYLEAEARYYYFTWGRPMTTKAMANLLSNILNENRWFPYLVQ 104

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++GG  +E    +   D  G      Y++ GSG+   +  L+   +             
Sbjct: 105 IIIGGYVDE--PTIANLDPFGGLIFDDYTATGSGTPFAIAVLEEGYRE------------ 150

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGD-KLEIVVLNKGGIHREYM 178
             L+  EA +L      +A  RD+YTG  K+++V + K G+  E++
Sbjct: 151 -DLTIEEAKELAIRAVRAAGRRDVYTGSKKVQVVTITKDGMKEEFV 195


>gi|256810347|ref|YP_003127716.1| proteasome endopeptidase complex subunit beta [Methanocaldococcus
           fervens AG86]
 gi|302595745|sp|C7P6N4.1|PSB_METFA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|256793547|gb|ACV24216.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
           fervens AG86]
          Length = 224

 Score = 65.9 bits (159), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 14/162 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   +  +G   D +A+ +LL A   +Y+ +  K +S    A LLSN L+  R+FP+ + 
Sbjct: 45  DYIALTIAGSVGDAQAIVRLLTAEAKLYKMRTGKNISPLACATLLSNILHSNRYFPFLTQ 104

Query: 74  NVLGGLDNEGKGCVYTYDAVGSY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            ++GG D      +++ D +G   E   +++ GSGS +    L+       P+       
Sbjct: 105 LIIGGYDLLEGAKLFSLDPLGGMNEEKTFTATGSGSPIAYGVLEAGYDRDMPV------- 157

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIH 174
                  E + L      SA ERD Y+G+ + + V+ K G+ 
Sbjct: 158 ------EEGIKLALKALKSAMERDTYSGNGISLAVITKEGVK 193


>gi|126179146|ref|YP_001047111.1| proteasome endopeptidase complex [Methanoculleus marisnigri JR1]
 gi|302595840|sp|A3CUS9.1|PSB_METMJ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|125861940|gb|ABN57129.1| proteasome endopeptidase complex, beta component, Threonine
           peptidase, MEROPS family T01A [Methanoculleus marisnigri
           JR1]
          Length = 214

 Score = 65.5 bits (158), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 15/154 (9%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLG 77
           + ++G   D + L ++L     +++ +  K MS    + LLSN L   R++PYY   ++G
Sbjct: 54  LTTAGGVGDAQQLVRILQVECNLFEMRRGKTMSVGAASTLLSNYLNQNRYYPYYVQLLMG 113

Query: 78  GLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPL 136
           G D+EG   VY+ DA+ G+ +     + GSGS      L++Q ++              +
Sbjct: 114 GFDDEGP-SVYSVDAMGGATKEEDIVATGSGSPFAYGVLEDQYRA-------------GM 159

Query: 137 SEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 170
            E +A DL      SA  RD  +G+ + +VV+ K
Sbjct: 160 KEDDAKDLAVRAVRSAMRRDSASGEDIMVVVITK 193


>gi|307595676|ref|YP_003901993.1| Proteasome endopeptidase complex [Vulcanisaeta distributa DSM
           14429]
 gi|307550877|gb|ADN50942.1| Proteasome endopeptidase complex [Vulcanisaeta distributa DSM
           14429]
          Length = 205

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 14/168 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   +AS G  AD++ L K+  A   +Y      + S    A+LLS  L+  R  PY+  
Sbjct: 48  DNIGIASIGILADMQVLTKIAKAYMSLYALDTKTRPSIRSAAKLLSYVLFANRVLPYFVE 107

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++GG+D+EG   ++  D++GS     Y++ G+G+ L +  L++  K PS          
Sbjct: 108 VLVGGVDDEGP-HLFIMDSLGSLIEDDYAAVGTGTKLAIAILESNYK-PS---------- 155

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELR 181
             ++  EA +L       +  RD  +GD ++I+ +   G   E + L+
Sbjct: 156 --MTVKEARELAIKAINQSISRDPVSGDGIDILTITGNGSAEETIPLQ 201


>gi|269986877|gb|EEZ93154.1| Proteasome endopeptidase complex [Candidatus Parvarchaeum
           acidiphilum ARMAN-4]
          Length = 206

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 19/158 (12%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRF---FPYYSFN 74
           + ++G  AD++A+ +L+ +   +Y+ +   ++   G   LLS  L+ KR      Y  F 
Sbjct: 50  ITTAGMVADLQAMVRLMRSELTLYEIRSGSKLDTDGAVSLLSAVLFNKRLSLNLIYGEF- 108

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 134
           ++GG D   K  +++ D  G   +  ++  GSG    +  L+   K              
Sbjct: 109 IVGGYDTAPK--LFSIDEAGGQGKDKFTVTGSGGVFALGVLEGDYKDN------------ 154

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
            +SE EAV L     +S+  RD+YTG+ ++I V+NK G
Sbjct: 155 -MSEEEAVKLAYKAISSSIRRDVYTGEGIDIAVINKKG 191


>gi|29726328|pdb|1J2Q|H Chain H, 20s Proteasome In Complex With Calpain-inhibitor I From
           Archaeoglobus Fulgidus
 gi|29726329|pdb|1J2Q|I Chain I, 20s Proteasome In Complex With Calpain-inhibitor I From
           Archaeoglobus Fulgidus
 gi|29726330|pdb|1J2Q|J Chain J, 20s Proteasome In Complex With Calpain-inhibitor I From
           Archaeoglobus Fulgidus
 gi|29726331|pdb|1J2Q|K Chain K, 20s Proteasome In Complex With Calpain-inhibitor I From
           Archaeoglobus Fulgidus
 gi|29726332|pdb|1J2Q|L Chain L, 20s Proteasome In Complex With Calpain-inhibitor I From
           Archaeoglobus Fulgidus
 gi|29726333|pdb|1J2Q|M Chain M, 20s Proteasome In Complex With Calpain-inhibitor I From
           Archaeoglobus Fulgidus
 gi|29726334|pdb|1J2Q|N Chain N, 20s Proteasome In Complex With Calpain-inhibitor I From
           Archaeoglobus Fulgidus
          Length = 202

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 17/160 (10%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           AD+  M ++G   D + L +++     +Y+ +  ++ +   +A L SN L   R+FPY  
Sbjct: 38  ADRMAMTTAGSVGDAQFLARIIKIEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLV 97

Query: 73  FNVLGGLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
             ++GG+D+EGK  +Y+ D + G+ E     + GSGS      L              +D
Sbjct: 98  QLLIGGIDSEGK-SIYSIDPIGGAIEEKDIVATGSGSLTAYGVL--------------ED 142

Query: 132 AVTP-LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 170
             TP +   EAV+L      SA +RD  +GD +++V + +
Sbjct: 143 RFTPEIGVDEAVELAVRAIYSAMKRDSASGDGIDVVKITE 182


>gi|11498092|ref|NP_069317.1| proteasome subunit beta [Archaeoglobus fulgidus DSM 4304]
 gi|17380266|sp|Q9P996.1|PSB_ARCFU RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|2650155|gb|AAB90757.1| proteasome, subunit beta (psmB) [Archaeoglobus fulgidus DSM 4304]
          Length = 213

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 17/160 (10%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           AD+  M ++G   D + L +++     +Y+ +  ++ +   +A L SN L   R+FPY  
Sbjct: 49  ADRMAMTTAGSVGDAQFLARIIKIEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLV 108

Query: 73  FNVLGGLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
             ++GG+D+EGK  +Y+ D + G+ E     + GSGS      L              +D
Sbjct: 109 QLLIGGIDSEGK-SIYSIDPIGGAIEEKDIVATGSGSLTAYGVL--------------ED 153

Query: 132 AVTP-LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 170
             TP +   EAV+L      SA +RD  +GD +++V + +
Sbjct: 154 RFTPEIGVDEAVELAVRAIYSAMKRDSASGDGIDVVKITE 193


>gi|327401050|ref|YP_004341889.1| proteasome endopeptidase complex subunit beta [Archaeoglobus
           veneficus SNP6]
 gi|327316558|gb|AEA47174.1| proteasome endopeptidase complex, beta subunit [Archaeoglobus
           veneficus SNP6]
          Length = 214

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 82/169 (48%), Gaps = 19/169 (11%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           AD+  M ++G   D + L +L+     +Y+ +  ++ +   +A +LSN L   R+FPY+ 
Sbjct: 49  ADRVAMTTAGSVGDAQFLARLVKVEASLYETRKEEKPTVKAIATMLSNLLNSSRYFPYFV 108

Query: 73  FNVLGGLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
             ++GG+D  G   +++ D + G+ E     + GSGS      L+++             
Sbjct: 109 QLLIGGVDKRGP-SMFSIDPIGGAIEETDIVATGSGSPTAYGVLEDRY------------ 155

Query: 132 AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMEL 180
               ++  E V+L      SA +RD  +GD +++V + K     EY++L
Sbjct: 156 -YPEITTQEGVELAIRAITSAMKRDSASGDGIDVVKITKD----EYVQL 199


>gi|357469569|ref|XP_003605069.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506124|gb|AES87266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 270

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/34 (85%), Positives = 33/34 (97%)

Query: 18 MASSGFQADVKALQKLLAARHLIYQHQHNKQMSC 51
          MASSGFQADVKALQK+L+ARHL YQ+QHNKQ+SC
Sbjct: 1  MASSGFQADVKALQKVLSARHLTYQNQHNKQISC 34


>gi|290559800|gb|EFD93124.1| Proteasome endopeptidase complex [Candidatus Parvarchaeum
           acidophilus ARMAN-5]
          Length = 206

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 26/177 (14%)

Query: 6   YILTSCRADKCVMASS-------GFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLL 58
           +I+ +  A+K +  SS       G  AD++A+ +L+ +   +Y+ +   ++   G   LL
Sbjct: 31  HIVANKNAEKVMSISSNIGVTTAGMVADLQAMVRLMRSELTLYEIRAGSKLDTDGAVSLL 90

Query: 59  SNTLYYKRF---FPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 115
           S  L+ KR      Y  F ++GG D E K  +++ D  G   +  ++  GSG    +  L
Sbjct: 91  SAVLFNKRLSLNLIYGEF-IIGGYDTEPK--LFSIDEAGGQGKDKFTVTGSGGVFALGVL 147

Query: 116 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
           +   K               ++E E + L     +S+  RD+YTG+ ++I V+NK G
Sbjct: 148 EGDYKDN-------------MTEEEGIKLAYKAISSSIRRDVYTGEGVDIAVINKKG 191


>gi|88602139|ref|YP_502317.1| proteasome endopeptidase complex [Methanospirillum hungatei JF-1]
 gi|121724010|sp|Q2FQL8.1|PSB_METHJ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|88187601|gb|ABD40598.1| proteasome endopeptidase complex, beta component, Threonine
           peptidase, MEROPS family T01A [Methanospirillum hungatei
           JF-1]
          Length = 209

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 79/163 (48%), Gaps = 15/163 (9%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           A +  + ++G   D + L +L+     +Y+ +  K++S    + LLSN L+  R FP+Y 
Sbjct: 48  APRIGLTTAGGVGDAQQLARLMTVEANLYEIRRGKRISVQAASTLLSNILHGNRMFPFYV 107

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
             ++GG+D  G   +++ DAVG   +  G  + GSGS +    L+++             
Sbjct: 108 QLLIGGVDETGP-VLFSVDAVGGTGKEDGIVATGSGSPMAYGVLEDRY------------ 154

Query: 132 AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIH 174
               + E  A++L      SA +RD  +G+ + +VV+ +   H
Sbjct: 155 -TLGMDERSAIELAIRALRSAIKRDAGSGEGVAVVVITEDSYH 196


>gi|352683092|ref|YP_004893616.1| proteasome subunit beta [Thermoproteus tenax Kra 1]
 gi|350275891|emb|CCC82538.1| proteasome, beta subunit [Thermoproteus tenax Kra 1]
          Length = 199

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 15/166 (9%)

Query: 11  CRADKCVMAS-SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFP 69
            + D+ V A+ SG  AD++ L  +L+ +   Y+ +H + +    +    S  L+Y R F 
Sbjct: 36  WKIDEHVAATMSGGVADLQGLLNILSIQAREYRSEHGRPIPIKTLVNYASLVLFYSRPFI 95

Query: 70  YYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA 129
           Y   +++GG D+EG   +Y  D +GSY    Y + GSGS   M  L+   +         
Sbjct: 96  YLVHSIIGGYDDEGP-QLYMLDWLGSYSSERYIATGSGSPYAMGVLEVNYRD-------- 146

Query: 130 QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHR 175
                 +S  EA+ + +    +A   D  +G+ ++IVV+ K G  R
Sbjct: 147 -----DISIDEAIKVAENAVKAAMRNDPGSGEGIDIVVITKEGFRR 187


>gi|261402297|ref|YP_003246521.1| proteasome endopeptidase complex subunit beta [Methanocaldococcus
           vulcanius M7]
 gi|302595760|sp|C9REN7.1|PSB_METVM RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|261369290|gb|ACX72039.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
           vulcanius M7]
          Length = 223

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 14/162 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   M  +G   D +A+ + L A   +Y+ +  K +S    A LLSN L+  R FP+ + 
Sbjct: 45  DYIAMTIAGSVGDAQAIVRALIAEARLYKMRTGKNISPRACATLLSNILHSSRMFPFLTQ 104

Query: 74  NVLGGLDNEGKGCVYTYDAVGSY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            ++GG D      +++ D +G   E   ++S GSGS +    L+ +              
Sbjct: 105 IIIGGYDLTDGPKLFSLDPLGGMNEEKTFTSTGSGSPIAYGVLEAEYDR----------- 153

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIH 174
              +S  E + L      SA ERD Y+G+ + + V+ K G+ 
Sbjct: 154 --DMSIEEGLKLALKALKSAMERDTYSGNGVSVAVITKEGVK 193


>gi|298674378|ref|YP_003726128.1| proteasome endopeptidase complex subunit beta [Methanohalobium
           evestigatum Z-7303]
 gi|298287366|gb|ADI73332.1| proteasome endopeptidase complex, beta subunit [Methanohalobium
           evestigatum Z-7303]
          Length = 211

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 85/177 (48%), Gaps = 19/177 (10%)

Query: 1   MGSFFYILTSCRA----DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQ 56
           MG+F    T+ +     D+  M ++G   D + + ++++    +++ + N+ ++  G+  
Sbjct: 32  MGNFIASKTAKKIYQIDDRIGMTTAGSVGDAQQIVRIISVESKLFKMRRNEPITIKGITT 91

Query: 57  LLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS-YERVGYSSQGSGSTLIMPFL 115
           LLSN L  +R+FP     ++GG+D  G   +Y+ D +G   E     + GSGS +    L
Sbjct: 92  LLSNLLSGQRYFPLMVQLIVGGVDKTGPN-MYSLDPLGGRIEETNIVATGSGSPITYGLL 150

Query: 116 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
           +++                 ++  E  +L      +A +RD  +GD +++VV+ K G
Sbjct: 151 EDRYHK-------------DMTSDEGAELAIRALHNAMKRDSASGDGIDVVVITKDG 194


>gi|332796484|ref|YP_004457984.1| Proteasome endopeptidase complex [Acidianus hospitalis W1]
 gi|332694219|gb|AEE93686.1| Proteasome endopeptidase complex [Acidianus hospitalis W1]
          Length = 196

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 86/162 (53%), Gaps = 15/162 (9%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLG 77
           +A +G   D++AL +++ A    Y+  + K +S    A+LLS  LY  ++ P+ S  +  
Sbjct: 47  IAGAGLFGDLQALTRIMNAEIKYYELYNEKPISTKAAAKLLSIILYQYKYMPFISEILFA 106

Query: 78  GLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLS 137
           G+DN G   +Y  D +GS     Y++ GSG+ + +  L+ +            D   PL 
Sbjct: 107 GVDN-GIPQLYVLDPLGSLLDDVYAAVGSGARVAIGVLEAE-----------YDQNMPLD 154

Query: 138 EAEAVDLVKTCFASATERDIYTGDKLEIVVLNK-GGIHREYM 178
           + + +  +K+  AS  ERD+ +GD ++I++L+K G  + EY+
Sbjct: 155 KGKEI-AIKSIKAS-IERDVTSGDGIDILILDKTGKTYTEYI 194


>gi|389851755|ref|YP_006353989.1| proteasome subunit beta [Pyrococcus sp. ST04]
 gi|388249061|gb|AFK21914.1| proteasome, subunit beta [Pyrococcus sp. ST04]
          Length = 197

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 16/166 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+  + ++G   DV+ L ++L A    Y     + MS   MA LLSN L   ++FPY   
Sbjct: 45  DRIAITTAGSVGDVQVLARILEAEARYYYFTWGRPMSTKAMANLLSNILNEHKWFPYLVQ 104

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++GG  +E    +   D  G      Y++ GSG+   +  L+   +             
Sbjct: 105 IIIGGYVDE--PTIANLDPFGGLIFDDYTATGSGTPFAIAVLEEGYRK------------ 150

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGD-KLEIVVLNKGGIHREYM 178
             L   +A +L      +A +RD+YTG  K+++V + K G+  E++
Sbjct: 151 -NLGIEKAKELAIKAVRAAGKRDVYTGSKKVQVVTITKEGMKEEFV 195


>gi|146305014|ref|YP_001192330.1| proteasome endopeptidase complex protein [Metallosphaera sedula DSM
           5348]
 gi|302595851|sp|A4YJ04.1|PSB2_METS5 RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|145703264|gb|ABP96406.1| proteasome endopeptidase complex, beta component, Threonine
           peptidase, MEROPS family T01A [Metallosphaera sedula DSM
           5348]
          Length = 196

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 84/162 (51%), Gaps = 15/162 (9%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLG 77
           +  +G   D++AL +++ A    Y+  +N+ +S    A+LLS  LY  ++ P+ S  + G
Sbjct: 47  IGGAGLFGDLQALTRIMNANIKYYELYNNRPISTRAAAKLLSIILYQYKYMPFISEVLFG 106

Query: 78  GLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLS 137
           G+DN G+  +Y  D +GS     Y++ GSG+ + +  L+ +                 L+
Sbjct: 107 GVDN-GEPQLYVLDPLGSLLDDIYAAVGSGARVAIGVLEAEYSE-------------KLT 152

Query: 138 EAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG-IHREYM 178
             +  +L      ++ ERD+ +GD ++I+ ++K G I+ E++
Sbjct: 153 LTQGRELTIKSLRASAERDVTSGDGIDILTISKDGKINTEFL 194


>gi|253744760|gb|EET00912.1| Proteasome subunit beta type 3 [Giardia intestinalis ATCC 50581]
          Length = 207

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 74/158 (46%), Gaps = 14/158 (8%)

Query: 16  CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNV 75
           C++  +G Q DV    + +  +  +Y  Q ++++     A+++S+ LY  RF PY+   +
Sbjct: 51  CLLGLAGLQTDVLTTYRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPI 110

Query: 76  LGGLDNEGKGCVYTYDAVGSYER-VGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 134
           + G + +GK  +   D +G  +    +   G+ S  ++   +  +K              
Sbjct: 111 IAGFEADGKPYLGAMDTIGCLDDCTNFQIAGTASDFLLGLCEAHIKP------------- 157

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
            +SE E + L++    SAT RD Y+G    +VVL + G
Sbjct: 158 DMSEEEILPLMEQIIRSATNRDAYSGWGAHVVVLRRDG 195


>gi|408382617|ref|ZP_11180160.1| proteasome subunit beta [Methanobacterium formicicum DSM 3637]
 gi|407814693|gb|EKF85317.1| proteasome subunit beta [Methanobacterium formicicum DSM 3637]
          Length = 208

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 14/155 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G  +D ++L K + A   +++ ++ K+++    A L SN L+  R +P+Y   +LGG+D
Sbjct: 55  AGAVSDAQSLMKYIRAEVALFRLRNGKRINVEAAATLTSNILHSSRGYPFYVQTLLGGVD 114

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
           ++G   +Y+ D  G   +    S GSGS +    L+++          +QD    L   E
Sbjct: 115 DKGP-ALYSLDPTGGVIKDLVISTGSGSPVAYGVLEDRY---------SQD----LYVEE 160

Query: 141 AVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHR 175
            +D+      SA ERD Y+G+ + +  + + G  R
Sbjct: 161 GIDVAIRAIKSAMERDTYSGNSILVATITEEGFKR 195


>gi|302348116|ref|YP_003815754.1| proteasome beta subunit precursor [Acidilobus saccharovorans
           345-15]
 gi|302328528|gb|ADL18723.1| proteasome beta subunit precursor [Acidilobus saccharovorans
           345-15]
          Length = 212

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 15/165 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   M  SG  AD +AL   +      Y+    K++S  GMA LL+N L   ++FPY   
Sbjct: 58  DYAAMTISGLVADAQALADAVREEARYYELDRGKRLSVYGMATLLANILSSSKYFPYLVQ 117

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++GG D      +Y  D  G       +S GSGS + +  L+   K             
Sbjct: 118 LIVGGYDTAPH--LYAIDPYGGVTEEKVTSTGSGSPVALGVLERGYKE------------ 163

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYM 178
             +S  +AV+L      SA  RD  TGD +++ ++ +     +++
Sbjct: 164 -GISLDDAVNLAAEAIRSAILRDSATGDGIDVTIIGRSTYQEKFI 207


>gi|195132590|ref|XP_002010726.1| GI21700 [Drosophila mojavensis]
 gi|193907514|gb|EDW06381.1| GI21700 [Drosophila mojavensis]
          Length = 101

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 58/109 (53%), Gaps = 15/109 (13%)

Query: 82  EGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLD-------NQLKSPSPLLLPAQDAVT 134
           E KG VY YD +GSYERV Y   G+   L++P LD       N+L  P    L  +D   
Sbjct: 1   EVKGAVYYYDPIGSYERVRYRVVGTSYALLLPCLDVFYGWENNRLTPP----LKDED--- 53

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            L+   AV + + C   A++RDIY+GD  E++ +   G+    ++LR D
Sbjct: 54  -LTMTMAVRMARKCLYIASDRDIYSGDMGELLSVTSEGMKSSTIKLRAD 101


>gi|17380218|sp|Q9N9W8.1|PSB3_GIALA RecName: Full=Proteasome subunit beta type-3
 gi|9367751|emb|CAB97490.1| 20S proteasome subunit [Giardia intestinalis]
          Length = 207

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 74/158 (46%), Gaps = 14/158 (8%)

Query: 16  CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNV 75
           C++  +G Q DV    + +  +  +Y  Q ++++     A+++S+ LY  RF PY+   +
Sbjct: 51  CLLGLAGLQTDVLTTYRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPI 110

Query: 76  LGGLDNEGKGCVYTYDAVGSYER-VGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 134
           + G + +GK  +   D +G  +    +   G+ S  ++   +  +K              
Sbjct: 111 IAGFEADGKPYLGAMDTIGCLDDCTNFQIAGTASDFLLGLCETHVKP------------- 157

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
            +SE E + L++    SAT RD Y+G    +VVL + G
Sbjct: 158 DMSEDEILPLMEQIIRSATNRDAYSGWGAHVVVLRRDG 195


>gi|159110825|ref|XP_001705654.1| Proteasome subunit beta type 3 [Giardia lamblia ATCC 50803]
 gi|157433742|gb|EDO77980.1| Proteasome subunit beta type 3 [Giardia lamblia ATCC 50803]
          Length = 207

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 74/158 (46%), Gaps = 14/158 (8%)

Query: 16  CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNV 75
           C++  +G Q DV    + +  +  +Y  Q ++++     A+++S+ LY  RF PY+   +
Sbjct: 51  CLLGLAGLQTDVLTTYRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPI 110

Query: 76  LGGLDNEGKGCVYTYDAVGSYER-VGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 134
           + G + +GK  +   D +G  +    +   G+ S  ++   +  +K              
Sbjct: 111 IAGFEADGKPYLGAMDTIGCLDDCTNFQIAGTASDFLLGLCETHVKP------------- 157

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
            +SE E + L++    SAT RD Y+G    +VVL + G
Sbjct: 158 DMSEDEILPLMEQIIRSATNRDAYSGWGAHVVVLRRDG 195


>gi|308160496|gb|EFO62983.1| Proteasome subunit beta type 3 [Giardia lamblia P15]
          Length = 207

 Score = 63.5 bits (153), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 74/158 (46%), Gaps = 14/158 (8%)

Query: 16  CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNV 75
           C++  +G Q DV    + +  +  +Y  Q ++++     A+++S+ LY  RF PY+   +
Sbjct: 51  CLLGLAGLQTDVLTTYRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPI 110

Query: 76  LGGLDNEGKGCVYTYDAVGSYER-VGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 134
           + G + +GK  +   D +G  +    +   G+ S  ++   +  +K              
Sbjct: 111 IAGFEADGKPYLGAMDTIGCLDDCTNFQIAGTASDFLLGLCETHVKP------------- 157

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
            +SE E + L++    SAT RD Y+G    +V+L + G
Sbjct: 158 DMSEDEILPLMEQIIRSATNRDAYSGWGAHVVILRRDG 195


>gi|167393450|ref|XP_001740580.1| proteasome subunit beta type-3 [Entamoeba dispar SAW760]
 gi|165895272|gb|EDR23004.1| proteasome subunit beta type-3, putative [Entamoeba dispar SAW760]
          Length = 205

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 19/171 (11%)

Query: 16  CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNT---LYYKRFFPYYS 72
           C+   +G  +DV+ + + +     +Y+ +    +   G  QLL++T   LY KRF PYY 
Sbjct: 51  CLFGGAGLFSDVQTMAEKVKYHANLYRLREGHDI---GPEQLLNSTAHMLYKKRFQPYYM 107

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
             ++ G+D+ G   V +YD +GS E       G+GS  +M   D+  K            
Sbjct: 108 SPIIAGIDDNGNSYVCSYDYIGSPEISRVGCVGTGSNELMGMCDSFYKE----------- 156

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              +   E V+ V  C  +A  RD ++G  +E+ +L +  +    M+ R+D
Sbjct: 157 --GMEPEELVEAVGQCLLAAENRDAFSGWGVEVYLLTRDNLTIYNMKPRQD 205


>gi|67481017|ref|XP_655858.1| proteasome beta subunit [Entamoeba histolytica HM-1:IMSS]
 gi|56473029|gb|EAL50477.1| proteasome beta subunit, putative [Entamoeba histolytica HM-1:IMSS]
 gi|407034951|gb|EKE37462.1| proteasome subunit beta type 3, putative [Entamoeba nuttalli P19]
 gi|449704564|gb|EMD44784.1| proteasome beta subunit, putative [Entamoeba histolytica KU27]
          Length = 205

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 19/171 (11%)

Query: 16  CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNT---LYYKRFFPYYS 72
           C+   +G  +DV+ + + +     +Y+ +    +   G  QLL++T   LY KRF PYY 
Sbjct: 51  CLFGGAGLFSDVQTMAEKVKYHANLYRLREGHDI---GPEQLLNSTAHMLYKKRFQPYYM 107

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
             ++ G+D+ G   V +YD +GS E       G+GS  +M   D+  K          + 
Sbjct: 108 SPIIAGIDDNGNSYVCSYDYIGSPEISQVGCVGTGSNELMGMCDSFYK----------EG 157

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           + P    E V+ V  C  +A  RD ++G  +E+ +L +  +    M+ R+D
Sbjct: 158 MEP---EELVEAVGQCLLAAENRDAFSGWGVEVYLLTRDNLTIYNMKPRQD 205


>gi|195421053|ref|XP_002060833.1| GK20618 [Drosophila willistoni]
 gi|194156918|gb|EDW71819.1| GK20618 [Drosophila willistoni]
          Length = 173

 Score = 62.8 bits (151), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 84/174 (48%), Gaps = 22/174 (12%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCP-GMAQLLSNTLYYKRFFPYYSF 73
           + V+ S G   D  AL  L+ +  L Y+   N    CP  +A +L+ T   K    Y+  
Sbjct: 13  QTVLGSVGCWCDTLALLSLVRSYSLKYELD-NLMPVCPDSLASMLTRT---KFTLQYFVS 68

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLD-------NQLKSPSPLL 126
           +V+ G+D+ G G VY     G+Y R+ Y   G+G  +I+P LD       +Q+ +     
Sbjct: 69  SVVAGIDSNGLGAVYFNHPSGNYLRLPYHISGTGGRIILPTLDWFEGNEEDQMNA----- 123

Query: 127 LPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMEL 180
                  T L+  +AV++    F +A +RDI+ G+ + I ++ + G+  + + L
Sbjct: 124 -----ITTSLTVDKAVEISMEAFRTARDRDIFIGNCMFINIITREGVQFKQLPL 172


>gi|13541494|ref|NP_111182.1| proteasome protease subunit beta [Thermoplasma volcanium GSS1]
 gi|74575802|sp|Q97AZ7.1|PSB_THEVO RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|14324878|dbj|BAB59804.1| proteasome beta subunit [Thermoplasma volcanium GSS1]
 gi|239061209|emb|CAZ48528.1| 20S proteasome beta subunit [Thermoplasma volcanium GSS1]
          Length = 211

 Score = 62.8 bits (151), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 15/153 (9%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLG 77
           M  +G   D + L + + A   +Y+ Q    M    +A LLSN L   ++ PY    ++G
Sbjct: 51  MTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVG 110

Query: 78  GLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLS 137
           G+D      V++ DA G      Y+S GSGS  +   L++Q                 LS
Sbjct: 111 GIDTSPH--VFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYNE-------------KLS 155

Query: 138 EAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 170
             E VDLV    ++A +RD  +G  +++ V+ K
Sbjct: 156 IDEGVDLVIRAISAAKQRDSASGGMIDVAVITK 188


>gi|91772427|ref|YP_565119.1| proteasome endopeptidase complex [Methanococcoides burtonii DSM
           6242]
 gi|121689381|sp|Q12YV7.1|PSB_METBU RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|91711442|gb|ABE51369.1| Proteasome subunit beta precursor [Methanococcoides burtonii DSM
           6242]
          Length = 210

 Score = 62.4 bits (150), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 84/175 (48%), Gaps = 19/175 (10%)

Query: 1   MGSFFYILTSCRA----DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQ 56
           MG F    T+ +     D   M ++G   D + + ++++    +++ +  + ++  G+  
Sbjct: 31  MGHFIASKTAKKIYQIDDLVGMTTAGSVGDAQQIVRIISVESKLFKMRRQESITIKGITT 90

Query: 57  LLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIMPFL 115
           LLSN L  +R++P     ++GG+D  G   +Y+ DA+ G+ E     S GSGS +    L
Sbjct: 91  LLSNMLSGQRYYPLMVQLLIGGVDKNGP-AIYSLDALGGNIEETRAVSTGSGSPMAYGVL 149

Query: 116 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 170
           +++                 ++  E VDL      +A +RD  +G+ +++VV+ K
Sbjct: 150 EDRYTE-------------DMTVVEGVDLAIRALHNAMKRDSASGENIDVVVITK 191


>gi|84489103|ref|YP_447335.1| PsmB [Methanosphaera stadtmanae DSM 3091]
 gi|121697945|sp|Q2NI68.1|PSB_METST RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|84372422|gb|ABC56692.1| PsmB [Methanosphaera stadtmanae DSM 3091]
          Length = 205

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 17/161 (10%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK     +G  +  ++L  +L A   +Y+ ++ K MS   +A L SN L  +   PYY  
Sbjct: 48  DKIGATIAGTVSHAQSLMDILKAEISLYKLRNEKDMSIDALAVLTSNILKSR---PYYVQ 104

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            +L G+D +G   +YT D  GSY    ++S GSGS      L+++               
Sbjct: 105 TILAGVDKDG-AKLYTLDPSGSYIPDTFTSTGSGSPYAFGVLEDRYNED----------- 152

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIH 174
             ++  E   +      SA ERD+Y+G+   + V+ K G+ 
Sbjct: 153 --ITTEEGKKIAIKAITSAMERDVYSGNNYRLGVITKDGMK 191


>gi|124485835|ref|YP_001030451.1| hypothetical protein Mlab_1015 [Methanocorpusculum labreanum Z]
 gi|302595748|sp|A2SS78.1|PSB_METLZ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|124363376|gb|ABN07184.1| Proteasome endopeptidase complex [Methanocorpusculum labreanum Z]
          Length = 212

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 15/158 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  M  +G   D + L +++     +Y+ +  +++S    A +LSN L   RF PYY  
Sbjct: 50  DKIGMTIAGGVGDAQQLVRIINVECNLYEIRRGQKISVGAAATILSNYLNQNRFSPYYVQ 109

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYE-RVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            ++GG+D  G   VY+ DA G       + S GSGS      L+++ K P+         
Sbjct: 110 LLVGGVDTSGP-SVYSVDAAGGATLEENFVSTGSGSLTAYGVLEDRFK-PN--------- 158

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 170
              ++E EA++L      +A  RD  +G+   +V++ +
Sbjct: 159 ---MTEEEAIELAVRALRAAMLRDSASGEGYNVVIITQ 193


>gi|386002905|ref|YP_005921204.1| proteasome subunit beta [Methanosaeta harundinacea 6Ac]
 gi|357210961|gb|AET65581.1| Proteasome subunit beta [Methanosaeta harundinacea 6Ac]
          Length = 179

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 83/177 (46%), Gaps = 19/177 (10%)

Query: 1   MGSFFYILTSCR----ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQ 56
           MG F    T+ +    AD+  + ++G   D ++L +++     +Y  Q  + M+  G   
Sbjct: 1   MGHFIASTTAQKIYQIADRVGLTTAGVVGDAQSLVRMIQVESKLYNMQRGEPMTVRGTTS 60

Query: 57  LLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIMPFL 115
           LLSN L  +R+FP+    +LGG+D +G   +++ DA+ GS +     + GSGS      L
Sbjct: 61  LLSNVLASRRYFPFMVQLLLGGVDKKGP-QLFSLDALGGSIQEQKVVATGSGSPTAYGVL 119

Query: 116 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
           +  L  P             ++  E + L      +A +RD  +GD ++ V +  GG
Sbjct: 120 E-ALYDPE------------MTVEEGMKLGVRAIHNAMKRDSASGDVIQAVKITAGG 163


>gi|330835873|ref|YP_004410601.1| proteasome endopeptidase complex [Metallosphaera cuprina Ar-4]
 gi|329568012|gb|AEB96117.1| proteasome endopeptidase complex [Metallosphaera cuprina Ar-4]
          Length = 196

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 84/162 (51%), Gaps = 15/162 (9%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLG 77
           +  +G   D++AL +++ A    Y+  +N+ +S    A+LLS  LY  ++ P+ S  + G
Sbjct: 47  IGGAGLFGDLQALTRIMNANIKYYELYNNRPISTKAAAKLLSIILYQYKYMPFISEVLFG 106

Query: 78  GLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLS 137
           G+D +G+  +Y  D +GS     Y++ GSG+ + +  L+ +      L+           
Sbjct: 107 GVD-DGQPQLYVLDPLGSLLDDVYAAVGSGARVSIGVLEAEYNESMTLM----------- 154

Query: 138 EAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG-IHREYM 178
             +  +L      ++ ERD+ +GD ++I+ +++ G I+ E++
Sbjct: 155 --QGKELTIKSLRASAERDVTSGDGIDILTISRDGKINTEFL 194


>gi|383320533|ref|YP_005381374.1| proteasome endopeptidase complex, archaeal, beta subunit
           [Methanocella conradii HZ254]
 gi|379321903|gb|AFD00856.1| proteasome endopeptidase complex, archaeal, beta subunit
           [Methanocella conradii HZ254]
          Length = 207

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 15/157 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   M  +G   D + L ++L     +++ + +  MS   ++ LLSN L   ++ P+Y  
Sbjct: 47  DNIAMTIAGSVGDGQRLARILQVEAKLFELRRHGPMSINALSMLLSNILAETKYMPFYVQ 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGS-YERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            ++GG+D  G   +Y+ D +G   E V +SS GSGS +    L+++ K            
Sbjct: 107 VLIGGVDKSGP-RIYSLDPLGGRIEEVKFSSTGSGSPIAYGVLEDRYKP----------- 154

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 169
              +S  + V+L      SA +RD  +G+ ++  V+ 
Sbjct: 155 --DISVEQGVELAAKALESAMKRDSASGNGMQFAVIT 189


>gi|119872605|ref|YP_930612.1| proteasome endopeptidase complex protein [Pyrobaculum islandicum
           DSM 4184]
 gi|302595721|sp|A1RTI7.1|PSB2_PYRIL RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|119674013|gb|ABL88269.1| proteasome endopeptidase complex, beta component, Threonine
           peptidase, MEROPS family T01A [Pyrobaculum islandicum
           DSM 4184]
          Length = 200

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 13/169 (7%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D      SG  AD+++L   L  R   Y+ ++ + +    +   +S  L+Y R + Y   
Sbjct: 40  DHVAATMSGGVADLQSLLSFLTLRAREYKIEYKRPIPIRALVNYVSLILFYSRPYIYLVH 99

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           +++GG+D E    +Y  D +G+  R  Y + GSGS    P+    L+      +  +D  
Sbjct: 100 SIIGGVDREEGAVLYMVDWLGTVTRERYIATGSGS----PYAKGALEVGYREDMSLED-- 153

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRK 182
                  AVDL      +A   D  +G+ +++VV+ K G  R +   +K
Sbjct: 154 -------AVDLAIRSVKAAIRNDPGSGEGIDVVVITKEGFRRVFTAQQK 195


>gi|374327726|ref|YP_005085926.1| proteasome beta subunit [Pyrobaculum sp. 1860]
 gi|356642995|gb|AET33674.1| proteasome beta subunit [Pyrobaculum sp. 1860]
          Length = 201

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 14/157 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D      SG  AD++++   L  R   Y+ +H K +    +   +S  L+Y R + Y   
Sbjct: 40  DHVAATMSGGVADLQSVLSFLTLRAREYRMEHKKPIPISALVNYMSLILFYSRPYVYIVH 99

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           +++GG+D EG   +Y  D +G+  R  Y + GSGS    P+    L+         +D  
Sbjct: 100 SIIGGVD-EGGAALYMIDWLGTVTRERYIATGSGS----PYAKGALEVGY-----RED-- 147

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 170
             +S  EA+DL      +A   D  +G+ +++VV+ K
Sbjct: 148 --MSLEEAIDLAIKSVKAAIRNDPGSGEGIDVVVITK 182


>gi|403374952|gb|EJY87444.1| Proteasome subunit beta type-3 [Oxytricha trifallax]
          Length = 208

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 81/176 (46%), Gaps = 18/176 (10%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            D+C+M  SG   DV+    L+  +  +Y+ +  ++M     ++L++ +LY KRF PY+ 
Sbjct: 46  TDQCLMGVSGLGTDVQTFNSLMKFKLNMYRLKEGREMKSETFSKLVATSLYEKRFGPYFV 105

Query: 73  FNVLGGL----DNEGKGCVYTYDAVGSYERVG-YSSQGSGSTLIMPFLDNQLKSPSPLLL 127
             V+ GL    D E K  + TYD++G     G +   G+G+ L+    +   +   P L 
Sbjct: 106 SPVVAGLDKISDTEYKPVICTYDSIGYRSNNGEFEVAGTGAELLYGVCETFYR---PNLE 162

Query: 128 PAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           P           E   ++     SA +RD  +G   ++ +L    +    ++ R+D
Sbjct: 163 P----------EELFQVISNSLLSALDRDSLSGWGSKVYILTPTELIVRSLKTRQD 208


>gi|315425374|dbj|BAJ47040.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
          Length = 223

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 16/161 (9%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           A    +  +G  AD + L  L+ A    YQ    + MS P +A+L S+ ++  R+FP+Y+
Sbjct: 54  APHVAITIAGRVADAQTLIDLIKANINYYQIMRGQVMSLPAVARLTSSLMFSSRYFPFYA 113

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
             +L G+DNEG   +Y  D  GS       + GSGS +    L+   +         +D 
Sbjct: 114 QLILAGVDNEGP-HLYNLDPFGSVTEEKLIATGSGSPVAYGVLEPNYR---------ED- 162

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEI--VVLNKG 171
              +    AV+L     ++A  RD  +GD +++  V+ +KG
Sbjct: 163 ---MDFNSAVELAFQAVSAAIRRDAGSGDSVDVAYVLKDKG 200


>gi|315426612|dbj|BAJ48240.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
          Length = 220

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 16/161 (9%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           A    +  +G  AD + L  L+ A    YQ    + MS P +A+L S+ ++  R+FP+Y+
Sbjct: 51  APHVAITIAGRVADAQTLIDLIKANINYYQIMRGQVMSLPAVARLTSSLMFSSRYFPFYA 110

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
             +L G+DNEG   +Y  D  GS       + GSGS +    L+   +         +D 
Sbjct: 111 QLILAGVDNEGP-HLYNLDPFGSVTEEKLIATGSGSPVAYGVLEPNYR---------ED- 159

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEI--VVLNKG 171
              +    AV+L     ++A  RD  +GD +++  V+ +KG
Sbjct: 160 ---MDFNSAVELAFQAVSAAIRRDAGSGDSVDVAYVLKDKG 197


>gi|315426554|dbj|BAJ48184.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
 gi|343485300|dbj|BAJ50954.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
          Length = 220

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 16/161 (9%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           A    +  +G  AD + L  L+ A    YQ    + MS P +A+L S+ ++  R+FP+Y+
Sbjct: 51  APHVAITIAGRVADAQTLIDLIKANINYYQIMRGQVMSLPAVARLTSSLMFSSRYFPFYA 110

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
             +L G+DNEG   +Y  D  GS       + GSGS +    L+   +         +D 
Sbjct: 111 QLILAGVDNEGP-HLYNLDPFGSVTEEKLIATGSGSPVAYGVLEPNYR---------ED- 159

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEI--VVLNKG 171
              +    AV+L     ++A  RD  +GD +++  V+ +KG
Sbjct: 160 ---MDFNSAVELAFQAVSAAIRRDAGSGDSVDVAYVLKDKG 197


>gi|355714010|gb|AES04859.1| proteasome subunit, beta type, 1 [Mustela putorius furo]
          Length = 76

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 6/79 (7%)

Query: 105 GSGSTLIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKL 163
           GS S ++ P LDNQ+   +      Q+    PLS   A+ LVK  F SA ERD+YTGD L
Sbjct: 3   GSASAMLQPLLDNQVGFKN-----TQNVEHVPLSLDRAMRLVKDVFVSAAERDVYTGDAL 57

Query: 164 EIVVLNKGGIHREYMELRK 182
            I ++ K GI  E + LRK
Sbjct: 58  RICIVTKEGIREETVPLRK 76


>gi|147919477|ref|YP_686783.1| 20S proteasome, beta subunit [Methanocella arvoryzae MRE50]
 gi|121685330|sp|Q0W2D6.1|PSB_UNCMA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|110622179|emb|CAJ37457.1| 20S proteasome, beta subunit [Methanocella arvoryzae MRE50]
          Length = 208

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 15/157 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   M  +G   D + L ++L     +++ + +  MS   ++ LLSN L   R+ PYY  
Sbjct: 48  DNAAMTIAGSVGDGQRLARILQVEAKLFELRRHGSMSINALSMLLSNILAEMRYAPYYVQ 107

Query: 74  NVLGGLDNEGKGCVYTYDAVGS-YERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            ++GGLD  G   +Y+ D +G   E   + S GSGS +    L+++ K       P    
Sbjct: 108 VLIGGLDKAGP-KIYSLDPLGGRIEEEKFVSTGSGSPIAYGVLEDRYK-------PG--- 156

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 169
              +S  E V+L      SA +RD  +G+ ++  V+ 
Sbjct: 157 ---MSVEEGVELAARALESAMKRDSASGNGMQFCVIT 190


>gi|239782090|pdb|3H4P|AA Chain a, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
 gi|239782091|pdb|3H4P|BB Chain b, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
 gi|239782092|pdb|3H4P|CC Chain c, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
 gi|239782093|pdb|3H4P|DD Chain d, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
 gi|239782094|pdb|3H4P|EE Chain e, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
 gi|239782095|pdb|3H4P|FF Chain f, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
 gi|239782096|pdb|3H4P|GG Chain g, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
 gi|239782104|pdb|3H4P|HH Chain h, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
 gi|239782105|pdb|3H4P|II Chain i, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
 gi|239782106|pdb|3H4P|JJ Chain j, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
 gi|239782107|pdb|3H4P|KK Chain k, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
 gi|239782108|pdb|3H4P|LL Chain l, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
 gi|239782109|pdb|3H4P|MM Chain m, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
 gi|239782110|pdb|3H4P|NN Chain n, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
          Length = 219

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 14/162 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   M  +G   D +A+ +LL A   +Y+ +  + +     A LLSN L+  R FP+ + 
Sbjct: 40  DYIAMTIAGSVGDAQAIVRLLIAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQ 99

Query: 74  NVLGGLDNEGKGCVYTYDAVGSY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            ++GG D      +++ D +G   E   +++ GSGS +    L+                
Sbjct: 100 IIIGGYDLLEGAKLFSLDPLGGMNEEKTFTATGSGSPIAYGVLEAGYDR----------- 148

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIH 174
              +S  E + L      SA ERD ++G+ + + V+ K G+ 
Sbjct: 149 --DMSVEEGIKLALNALKSAMERDTFSGNGISLAVITKDGVK 188


>gi|15669422|ref|NP_248232.1| proteasome subunit beta PsmB [Methanocaldococcus jannaschii DSM
           2661]
 gi|2499838|sp|Q58634.1|PSB_METJA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|1591869|gb|AAB99241.1| proteasome, subunit beta (psmB) [Methanocaldococcus jannaschii DSM
           2661]
          Length = 224

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 14/162 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   M  +G   D +A+ +LL A   +Y+ +  + +     A LLSN L+  R FP+ + 
Sbjct: 45  DYIAMTIAGSVGDAQAIVRLLIAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQ 104

Query: 74  NVLGGLDNEGKGCVYTYDAVGSY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            ++GG D      +++ D +G   E   +++ GSGS +    L+                
Sbjct: 105 IIIGGYDLLEGAKLFSLDPLGGMNEEKTFTATGSGSPIAYGVLEAGYDR----------- 153

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIH 174
              +S  E + L      SA ERD ++G+ + + V+ K G+ 
Sbjct: 154 --DMSVEEGIKLALNALKSAMERDTFSGNGISLAVITKDGVK 193


>gi|297619257|ref|YP_003707362.1| proteasome endopeptidase complex subunit beta [Methanococcus voltae
           A3]
 gi|297378234|gb|ADI36389.1| proteasome endopeptidase complex, beta subunit [Methanococcus
           voltae A3]
          Length = 215

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 78/159 (49%), Gaps = 17/159 (10%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLG 77
           M  +G   D ++L ++++A   IY+ +    MS      L+SN L+  R FP  +  ++G
Sbjct: 53  MTIAGSVGDAQSLVRIISAETKIYKMRTGNNMSPLACTTLMSNVLHGNRHFPLMNQLIVG 112

Query: 78  GLD--NEGKGCVYTYDAVGSY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 134
           G D  N+ +  +Y+ DAVG   E   ++S GSG             SP+   +   + V 
Sbjct: 113 GYDVCND-EPQLYSLDAVGGINEETTFTSTGSG-------------SPTAYGVLEAEYVN 158

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
            L  + A+ L     +SA +RD Y+G+ + +  ++K G+
Sbjct: 159 KLKTSAALKLAVKAISSAMKRDAYSGNGISLAKIDKNGV 197


>gi|347522768|ref|YP_004780338.1| proteasome endopeptidase complex subunit beta [Pyrolobus fumarii
           1A]
 gi|343459650|gb|AEM38086.1| proteasome endopeptidase complex, beta subunit [Pyrolobus fumarii
           1A]
          Length = 209

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 79/165 (47%), Gaps = 16/165 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   M +SG  AD + L ++L      Y+    ++ S    A +L+  ++  R +PY   
Sbjct: 57  DYMAMTTSGLVADAQVLAEILREELRYYELTTKRKPSVAAAANMLAAIIFSARMYPYIVQ 116

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            +LGG D   +  ++  D +G+     Y++ GSGS + +  +++  +             
Sbjct: 117 LLLGGYDTAPR--LFNIDWLGTVTEEKYTATGSGSPIAIGVIESGYRE------------ 162

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG-IHREY 177
             +   EAV+L      +A ERD+ TG+ +++V++ KG  I REY
Sbjct: 163 -DMKVDEAVELAVKAVRAAMERDVATGNGIDVVIIGKGTFITREY 206


>gi|281209309|gb|EFA83482.1| p21-activated protein kinase [Polysphondylium pallidum PN500]
          Length = 1404

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 47/83 (56%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           +DKC +  SG   D + L + L  RH +Y+ +  + MS   +  L+SN LY KRF PY++
Sbjct: 46  SDKCFIGISGLVTDAQTLYQKLVFRHNLYKLKEERDMSPQVLTNLVSNMLYEKRFGPYFT 105

Query: 73  FNVLGGLDNEGKGCVYTYDAVGS 95
             V+ GLD+  K  +   D +G+
Sbjct: 106 EPVICGLDSNNKPFISGMDLIGA 128


>gi|289192182|ref|YP_003458123.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
           sp. FS406-22]
 gi|302595757|sp|D3S8M7.1|PSB_METSF RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|288938632|gb|ADC69387.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
           sp. FS406-22]
          Length = 224

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 14/162 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   M  +G   D +A+ +LL A   +Y+ +  + +     A LLSN L+  R FP+ + 
Sbjct: 45  DYIAMTIAGSVGDAQAIVRLLTAEAKLYKMRTGRNIPPLACATLLSNILHSSRVFPFLTQ 104

Query: 74  NVLGGLDNEGKGCVYTYDAVGSY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            ++GG D      +++ D +G   E   +++ GSGS +    L+                
Sbjct: 105 IIIGGYDLLEGAKLFSLDPLGGMNEEKTFTATGSGSPIAYGVLEAGYDR----------- 153

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIH 174
              +S  E + L      SA ERD ++G+ + + V+ K G+ 
Sbjct: 154 --EMSVEEGIKLAINALKSAMERDTFSGNGISLAVITKEGVK 193


>gi|435851174|ref|YP_007312760.1| proteasome endopeptidase complex, archaeal, beta subunit
           [Methanomethylovorans hollandica DSM 15978]
 gi|433661804|gb|AGB49230.1| proteasome endopeptidase complex, archaeal, beta subunit
           [Methanomethylovorans hollandica DSM 15978]
          Length = 210

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 84/174 (48%), Gaps = 19/174 (10%)

Query: 1   MGSFFYILTSCRA----DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQ 56
           MG F    T+ +     D   M ++G   D + + ++++    +Y+ +  + M+  G+  
Sbjct: 31  MGHFIASKTAKKIYQIDDLVGMTTAGSVGDAQQIVRVMSVESHLYKMRRKEPMTIKGITT 90

Query: 57  LLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIMPFL 115
           LLSN L  +R++P     ++GG+D  G   +++ DA+ G+ E     + GSGS +    L
Sbjct: 91  LLSNILSGQRYYPLMVQLLVGGVDKNGP-AIFSLDALGGTIEETKAVATGSGSPMAYGVL 149

Query: 116 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 169
           +++              V  LS  E V+L      +A +RD  +G+ +++VV+ 
Sbjct: 150 EDRF-------------VDGLSIEEGVELAIRALHNAMKRDSASGNGIDVVVIT 190


>gi|159476310|ref|XP_001696254.1| hypothetical protein CHLREDRAFT_187099 [Chlamydomonas reinhardtii]
 gi|158282479|gb|EDP08231.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 204

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 71/172 (41%), Gaps = 16/172 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +  SG Q D   L + L  RH +Y+ +  + M       +LSN LY +RF PY++ 
Sbjct: 47  DKLYLGLSGLQTDATTLHQKLQFRHNLYKLREERDMKPSTFGHMLSNALYERRFGPYFAA 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            V+ GL+ +G   +   D +G+ E    +   G+              SP  L    +  
Sbjct: 107 PVVAGLEPDGTPYLCGMDTIGAIESAKDFMITGT--------------SPESLYGMCESM 152

Query: 133 VTPLSEA-EAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             P  E  E  + V  C  S  +RD   G    + V+ K  +    ++ R D
Sbjct: 153 WRPDMEPDELFETVAQCLMSGCDRDALAGWGAVVHVITKDKVVSRTLKTRMD 204


>gi|118345684|ref|XP_976672.1| Proteasome A-type and B-type family protein [Tetrahymena
           thermophila]
 gi|89288089|gb|EAR86077.1| Proteasome A-type and B-type family protein [Tetrahymena
           thermophila SB210]
          Length = 289

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 74/167 (44%), Gaps = 17/167 (10%)

Query: 13  ADKCVMASSGFQADVKALQKLL-AARHLIYQHQHNKQMSCPGMAQLLSNTLYYKR--FFP 69
            D C  ASSG  +D + L +L+    +  Y +      +       +S   Y+ R    P
Sbjct: 112 TDNCAFASSGEFSDFQELSRLIDEMTNQTYLNDDKINYTPRDYGNYISQLQYHHRNKMNP 171

Query: 70  YYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA 129
            Y +NV+GG+DN GK  +   D  G+Y    + S G G+ L  P  +   ++        
Sbjct: 172 LYLWNVIGGVDN-GKPYLAHIDLYGTYIETNHVSTGFGNYLCGPLFEKGWRAD------- 223

Query: 130 QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHRE 176
                 +SE EA  LV TCF +   RD    + +++ V++K G+  E
Sbjct: 224 ------MSEQEAKQLVNTCFQALFYRDARAHETIQVTVIDKNGVRIE 264


>gi|412992168|emb|CCO19881.1| predicted protein [Bathycoccus prasinos]
          Length = 209

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 14/170 (8%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           +  +A SG  +D+  L+     +H +Y+ + N+ M     A ++S TLY KRF PYY   
Sbjct: 53  RLFLAMSGLASDMHTLKATFEFKHKLYELRENRVMEPKTFASVVSTTLYEKRFGPYYVEP 112

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           V+ GLD   K  +   D +G+      +   G+ S  +    ++  K             
Sbjct: 113 VIAGLDKASKPYITGMDLIGAAAPTENFVVAGNNSESLFGVCESMYKE------------ 160

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             L   E  +++  C  S + RD  +G    + V+ K G+  + ++ R D
Sbjct: 161 -NLEPEELFEVISQCLLSGSGRDCLSGWGGTVYVITKDGVEVKSVKGRMD 209


>gi|388491852|gb|AFK33992.1| unknown [Lotus japonicus]
          Length = 204

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 45/84 (53%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +A SG   D + L + L  RH +YQ +  + M     A L+S  LY KRF PY+  
Sbjct: 47  DKLFIALSGLATDAQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQ 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYE 97
            V+ GL +E K  + T D +G+ E
Sbjct: 107 PVIAGLGDEDKPFICTMDCIGAKE 130


>gi|294948700|ref|XP_002785851.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
           50983]
 gi|239899959|gb|EER17647.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
           50983]
          Length = 202

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 49/81 (60%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           +C++   G   D + L +LL  R  +Y+ + +++M C  ++ L++  LY KRF PY+   
Sbjct: 46  RCLVGFQGLATDSQTLSQLLKFRLKLYKLKEDREMPCDVVSHLMATMLYEKRFGPYFCEP 105

Query: 75  VLGGLDNEGKGCVYTYDAVGS 95
           V+ GL N+G+  + ++D +G+
Sbjct: 106 VIAGLKNDGEPFISSFDLIGT 126


>gi|308799609|ref|XP_003074585.1| proteasome beta subunit (ISS) [Ostreococcus tauri]
 gi|116000756|emb|CAL50436.1| proteasome beta subunit (ISS) [Ostreococcus tauri]
          Length = 203

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 48/82 (58%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +  +G  AD   L + L  +H +Y+ + N+ MS    A ++S TLY KRF PYY+ 
Sbjct: 46  DKLWLGLTGLIADQLTLAQKLRFKHDMYELRENRVMSPKVFASVVSTTLYEKRFQPYYTE 105

Query: 74  NVLGGLDNEGKGCVYTYDAVGS 95
            V+ GLD +GK  + + D +G+
Sbjct: 106 PVVAGLDKDGKPYITSMDLIGA 127


>gi|195927408|pdb|3C91|H Chain H, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927409|pdb|3C91|I Chain I, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927410|pdb|3C91|J Chain J, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927411|pdb|3C91|K Chain K, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927412|pdb|3C91|L Chain L, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927413|pdb|3C91|M Chain M, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927414|pdb|3C91|N Chain N, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927422|pdb|3C91|V Chain V, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927423|pdb|3C91|W Chain W, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927424|pdb|3C91|X Chain X, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927425|pdb|3C91|Y Chain Y, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927426|pdb|3C91|Z Chain Z, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927427|pdb|3C91|1 Chain 1, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927428|pdb|3C91|2 Chain 2, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927436|pdb|3C92|H Chain H, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|195927437|pdb|3C92|I Chain I, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|195927438|pdb|3C92|J Chain J, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|195927439|pdb|3C92|K Chain K, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|195927440|pdb|3C92|L Chain L, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|195927441|pdb|3C92|M Chain M, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|195927442|pdb|3C92|N Chain N, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|195927450|pdb|3C92|V Chain V, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|195927451|pdb|3C92|W Chain W, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|195927452|pdb|3C92|X Chain X, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|195927453|pdb|3C92|Y Chain Y, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|195927454|pdb|3C92|Z Chain Z, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|195927455|pdb|3C92|1 Chain 1, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|195927456|pdb|3C92|2 Chain 2, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|262368054|pdb|3JRM|H Chain H, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368055|pdb|3JRM|I Chain I, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368056|pdb|3JRM|J Chain J, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368057|pdb|3JRM|K Chain K, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368058|pdb|3JRM|L Chain L, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368059|pdb|3JRM|M Chain M, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368060|pdb|3JRM|N Chain N, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368080|pdb|3JSE|H Chain H, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368081|pdb|3JSE|I Chain I, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368082|pdb|3JSE|J Chain J, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368083|pdb|3JSE|K Chain K, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368084|pdb|3JSE|L Chain L, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368085|pdb|3JSE|M Chain M, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368086|pdb|3JSE|N Chain N, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368101|pdb|3JTL|H Chain H, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368102|pdb|3JTL|I Chain I, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368103|pdb|3JTL|J Chain J, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368104|pdb|3JTL|K Chain K, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368105|pdb|3JTL|L Chain L, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368106|pdb|3JTL|M Chain M, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368107|pdb|3JTL|N Chain N, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
          Length = 203

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 15/153 (9%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLG 77
           M  +G   D + L + + A   +Y+ Q    M    +A LLSN L   ++ PY    ++G
Sbjct: 43  MTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVG 102

Query: 78  GLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLS 137
           G+D      V++ DA G      Y+S GSGS  +   L++Q                 ++
Sbjct: 103 GIDTAPH--VFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYSE-------------KMT 147

Query: 138 EAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 170
             E VDLV    ++A +RD  +G  +++ V+ +
Sbjct: 148 VDEGVDLVIRAISAAKQRDSASGGMIDVAVITR 180


>gi|294929626|ref|XP_002779296.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
           50983]
 gi|239888359|gb|EER11091.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
           50983]
          Length = 444

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 49/81 (60%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           +C++   G   D + L +LL  R  +Y+ + +++M C  ++ L++  LY KRF PY+   
Sbjct: 288 RCLVGFQGLATDSQTLSQLLKFRLKLYKLKEDREMPCDVVSHLMATMLYEKRFGPYFCEP 347

Query: 75  VLGGLDNEGKGCVYTYDAVGS 95
           V+ GL N+G+  + ++D +G+
Sbjct: 348 VIAGLKNDGEPFISSFDLIGT 368


>gi|294879946|ref|XP_002768837.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
           50983]
 gi|239871775|gb|EER01555.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
           50983]
          Length = 444

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 49/81 (60%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           +C++   G   D + L +LL  R  +Y+ + +++M C  ++ L++  LY KRF PY+   
Sbjct: 288 RCLVGFQGLATDSQTLSQLLKFRLKLYKLKEDREMPCDVVSHLMATMLYEKRFGPYFCEP 347

Query: 75  VLGGLDNEGKGCVYTYDAVGS 95
           V+ GL N+G+  + ++D +G+
Sbjct: 348 VIAGLKNDGEPFISSFDLIGT 368


>gi|302829446|ref|XP_002946290.1| hypothetical protein VOLCADRAFT_78969 [Volvox carteri f.
           nagariensis]
 gi|300269105|gb|EFJ53285.1| hypothetical protein VOLCADRAFT_78969 [Volvox carteri f.
           nagariensis]
          Length = 204

 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 70/171 (40%), Gaps = 14/171 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +  SG   D + L + L  RH +Y+ +  + M       +LSN LY +RF PY++ 
Sbjct: 47  DKLYLGLSGLLTDAQTLHQKLLFRHNLYKLREERDMKPSTFGHMLSNALYERRFGPYFAA 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            V+ GL+ +G   +   D +G+ E       G               SP  L    +   
Sbjct: 107 PVVAGLEPDGTPYLSGMDTIGAIETAKDFMIGG-------------TSPESLYGMCESMW 153

Query: 134 TPLSEAEAV-DLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            P  E E + + V  C  S  +RD   G    I V+ K  +    ++ R D
Sbjct: 154 RPDMEPEELFETVAQCLMSGFDRDALAGWGAVIHVITKDKVITRTLKTRMD 204


>gi|73535606|pdb|1YA7|H Chain H, Implications For Interactions Of Proteasome With Pan And
           Pa700 From The 1.9 A Structure Of A Proteasome-11s
           Activator Complex
 gi|73535607|pdb|1YA7|I Chain I, Implications For Interactions Of Proteasome With Pan And
           Pa700 From The 1.9 A Structure Of A Proteasome-11s
           Activator Complex
 gi|73535608|pdb|1YA7|J Chain J, Implications For Interactions Of Proteasome With Pan And
           Pa700 From The 1.9 A Structure Of A Proteasome-11s
           Activator Complex
 gi|73535609|pdb|1YA7|K Chain K, Implications For Interactions Of Proteasome With Pan And
           Pa700 From The 1.9 A Structure Of A Proteasome-11s
           Activator Complex
 gi|73535610|pdb|1YA7|L Chain L, Implications For Interactions Of Proteasome With Pan And
           Pa700 From The 1.9 A Structure Of A Proteasome-11s
           Activator Complex
 gi|73535611|pdb|1YA7|M Chain M, Implications For Interactions Of Proteasome With Pan And
           Pa700 From The 1.9 A Structure Of A Proteasome-11s
           Activator Complex
 gi|73535612|pdb|1YA7|N Chain N, Implications For Interactions Of Proteasome With Pan And
           Pa700 From The 1.9 A Structure Of A Proteasome-11s
           Activator Complex
 gi|73535645|pdb|1YAR|H Chain H, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
           Pa26 Complex
 gi|73535646|pdb|1YAR|I Chain I, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
           Pa26 Complex
 gi|73535647|pdb|1YAR|J Chain J, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
           Pa26 Complex
 gi|73535648|pdb|1YAR|K Chain K, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
           Pa26 Complex
 gi|73535649|pdb|1YAR|L Chain L, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
           Pa26 Complex
 gi|73535650|pdb|1YAR|M Chain M, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
           Pa26 Complex
 gi|73535651|pdb|1YAR|N Chain N, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
           Pa26 Complex
 gi|73535666|pdb|1YAU|H Chain H, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
 gi|73535667|pdb|1YAU|I Chain I, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
 gi|73535668|pdb|1YAU|J Chain J, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
 gi|73535669|pdb|1YAU|K Chain K, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
 gi|73535670|pdb|1YAU|L Chain L, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
 gi|73535671|pdb|1YAU|M Chain M, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
 gi|73535672|pdb|1YAU|N Chain N, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
 gi|282403716|pdb|3IPM|H Chain H, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With The C- Terminus Of Pan
 gi|282403717|pdb|3IPM|I Chain I, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With The C- Terminus Of Pan
 gi|282403718|pdb|3IPM|J Chain J, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With The C- Terminus Of Pan
 gi|282403719|pdb|3IPM|K Chain K, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With The C- Terminus Of Pan
 gi|282403720|pdb|3IPM|L Chain L, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With The C- Terminus Of Pan
 gi|282403721|pdb|3IPM|M Chain M, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With The C- Terminus Of Pan
 gi|282403722|pdb|3IPM|N Chain N, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With The C- Terminus Of Pan
          Length = 217

 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 15/153 (9%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLG 77
           M  +G   D + L + + A   +Y+ Q    M    +A LLSN L   ++ PY    ++G
Sbjct: 51  MTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVG 110

Query: 78  GLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLS 137
           G+D      V++ DA G      Y+S GSGS  +   L++Q                 ++
Sbjct: 111 GIDTAPH--VFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYSE-------------KMT 155

Query: 138 EAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 170
             E VDLV    ++A +RD  +G  +++ V+ +
Sbjct: 156 VDEGVDLVIRAISAAKQRDSASGGMIDVAVITR 188


>gi|16081708|ref|NP_394085.1| proteasome, beta chain [Thermoplasma acidophilum DSM 1728]
 gi|130867|sp|P28061.1|PSB_THEAC RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|1633360|pdb|1PMA|B Chain B, Proteasome From Thermoplasma Acidophilum
 gi|1633374|pdb|1PMA|P Chain P, Proteasome From Thermoplasma Acidophilum
 gi|1633375|pdb|1PMA|Q Chain Q, Proteasome From Thermoplasma Acidophilum
 gi|1633376|pdb|1PMA|R Chain R, Proteasome From Thermoplasma Acidophilum
 gi|1633377|pdb|1PMA|S Chain S, Proteasome From Thermoplasma Acidophilum
 gi|1633378|pdb|1PMA|T Chain T, Proteasome From Thermoplasma Acidophilum
 gi|1633379|pdb|1PMA|U Chain U, Proteasome From Thermoplasma Acidophilum
 gi|1633380|pdb|1PMA|V Chain V, Proteasome From Thermoplasma Acidophilum
 gi|1633381|pdb|1PMA|W Chain W, Proteasome From Thermoplasma Acidophilum
 gi|1633382|pdb|1PMA|X Chain X, Proteasome From Thermoplasma Acidophilum
 gi|1633383|pdb|1PMA|Y Chain Y, Proteasome From Thermoplasma Acidophilum
 gi|1633384|pdb|1PMA|Z Chain Z, Proteasome From Thermoplasma Acidophilum
 gi|1633385|pdb|1PMA|1 Chain 1, Proteasome From Thermoplasma Acidophilum
 gi|1633386|pdb|1PMA|2 Chain 2, Proteasome From Thermoplasma Acidophilum
 gi|154680|gb|AAA72102.1| proteasome beta-subunit [Thermoplasma acidophilum]
 gi|10639779|emb|CAC11751.1| proteasome, beta chain [Thermoplasma acidophilum]
          Length = 211

 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 15/153 (9%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLG 77
           M  +G   D + L + + A   +Y+ Q    M    +A LLSN L   ++ PY    ++G
Sbjct: 51  MTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVG 110

Query: 78  GLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLS 137
           G+D      V++ DA G      Y+S GSGS  +   L++Q                 ++
Sbjct: 111 GIDTAPH--VFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYSE-------------KMT 155

Query: 138 EAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 170
             E VDLV    ++A +RD  +G  +++ V+ +
Sbjct: 156 VDEGVDLVIRAISAAKQRDSASGGMIDVAVITR 188


>gi|388521659|gb|AFK48891.1| unknown [Lotus japonicus]
          Length = 204

 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 45/84 (53%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +  SG   D + L + L  RH +YQ +  + M     A L+S+ LY KRF PY+  
Sbjct: 47  DKLFIGLSGLATDAQTLYQRLVFRHKLYQLREERDMKPETFASLVSSILYEKRFGPYFCQ 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYE 97
            V+ GL +E K  + T D +G+ E
Sbjct: 107 PVIAGLGDEDKPFICTMDCIGAKE 130


>gi|325958081|ref|YP_004289547.1| proteasome endopeptidase complex subunit beta [Methanobacterium sp.
           AL-21]
 gi|325329513|gb|ADZ08575.1| proteasome endopeptidase complex, beta subunit [Methanobacterium
           sp. AL-21]
          Length = 210

 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 14/150 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G  +D + L   ++A   +Y+ ++   MS    A + SN L+  RF+PYY   +LGG+D
Sbjct: 55  AGSVSDAQKLMGYISAEVALYRLRNGAPMSVEAAANMTSNILHASRFYPYYVQTLLGGVD 114

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
            +G   +++ D  G   +    S GSGS +    L+++      +              E
Sbjct: 115 EKGP-ALFSLDPSGGVIKDLMISTGSGSPVAYGVLEDRYNQEMDI-------------EE 160

Query: 141 AVDLVKTCFASATERDIYTGDKLEIVVLNK 170
              +V     +A ERD Y+G+ +++  + K
Sbjct: 161 GTSVVIRAIKAAMERDTYSGNGIKVATITK 190


>gi|449464176|ref|XP_004149805.1| PREDICTED: proteasome subunit beta type-3-A-like [Cucumis sativus]
          Length = 204

 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 45/84 (53%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +  SG   D + L + L  RH +YQ +  + M     A L+S  LY KRF PY+  
Sbjct: 47  DKLFLGLSGLGTDAQTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYFCQ 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYE 97
            V+ GL +E K  + T D++G+ E
Sbjct: 107 PVIAGLSDEDKPFICTMDSIGAKE 130


>gi|255558626|ref|XP_002520338.1| proteasome subunit beta type, putative [Ricinus communis]
 gi|223540557|gb|EEF42124.1| proteasome subunit beta type, putative [Ricinus communis]
          Length = 204

 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 14/171 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+  +  SG   D + L + L  RH +YQ +  + M+    A L+S  LY KRF PY+  
Sbjct: 47  DRLFLGLSGLATDAQTLYQRLVFRHKLYQLREERDMNPETFASLVSALLYEKRFGPYFCQ 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            V+ GL +E K  + T D++G+ E    +   G+ S  +    ++  K            
Sbjct: 107 PVIAGLSDENKPFICTMDSIGAKELARDFVVAGTASESLYGACESMFKP----------- 155

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              L   E  +++     S+ +RD  +G    + V+    +    ++ R D
Sbjct: 156 --DLEAEELTEIISQALLSSVDRDCLSGWGGHVYVVTPTEVTERILKGRMD 204


>gi|296109858|ref|YP_003616807.1| proteasome endopeptidase complex, beta subunit [methanocaldococcus
           infernus ME]
 gi|295434672|gb|ADG13843.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
           infernus ME]
          Length = 205

 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 15/162 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   +  +G   D ++L + L A   +Y+ +  K MS      LLSN L+  R+FP+   
Sbjct: 44  DNLALTIAGSVGDAQSLVRYLTAEAKLYRMRTGKLMSPLACTTLLSNILHSSRYFPFLVQ 103

Query: 74  NVLGGLDNEGKGCVYTYDAVGSY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            ++GG D +G   +Y+ D +G   E   +++ GSGS +    L+   K            
Sbjct: 104 MIVGGFDEKGFK-LYSLDPLGGVNEEKDFTATGSGSPIAYGVLEAGYKK----------- 151

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIH 174
              +   + V LV     +A ERD ++G+ + + ++ K G+ 
Sbjct: 152 --DMDYKKGVSLVLKALQAAMERDTFSGNGVSLALITKDGVK 191


>gi|397628563|gb|EJK68962.1| hypothetical protein THAOC_09830 [Thalassiosira oceanica]
          Length = 204

 Score = 59.7 bits (143), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 48/82 (58%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+ ++  +G   DV+ L +LL  R  +Y+ +  ++M+      L+SN LY KRF PY+  
Sbjct: 47  DRLMVGLAGLATDVQTLDQLLRFRMNLYELREEREMTPEVFTNLMSNMLYEKRFGPYFCE 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGS 95
            V+ GLD +GK  + T D +G+
Sbjct: 107 PVIAGLDPKGKPFLGTMDLIGA 128


>gi|351721818|ref|NP_001237990.1| uncharacterized protein LOC100499664 [Glycine max]
 gi|255625639|gb|ACU13164.1| unknown [Glycine max]
          Length = 204

 Score = 59.7 bits (143), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 45/84 (53%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +A SG   D + L + L  RH +YQ +  + M     A L+S  LY KRF PY+  
Sbjct: 47  DKLFIALSGLATDAQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQ 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYE 97
            V+ GL +E K  + T D +G+ E
Sbjct: 107 PVIAGLGDEDKPFICTMDCLGAKE 130


>gi|344232930|gb|EGV64803.1| proteasome-domain-containing protein [Candida tenuis ATCC 10573]
 gi|344232931|gb|EGV64804.1| hypothetical protein CANTEDRAFT_113576 [Candida tenuis ATCC 10573]
          Length = 205

 Score = 59.7 bits (143), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 82/171 (47%), Gaps = 14/171 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK ++  +G   DV  L ++   ++ +Y+ +  +++     A L+S+TLY KRF PY+  
Sbjct: 48  DKVMLGLTGLATDVTTLNEVFRFKNNLYELREERKIEPQTFANLVSSTLYEKRFGPYFCG 107

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            V+ GL+ E K  +  +D +G  +    +   G+ S  +    ++ L  P+   L A D 
Sbjct: 108 PVVAGLNKENKPFICGFDLIGCIDFAKDFIVSGTASEQLYGMCES-LYEPN---LEADDL 163

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              +S+A           +A +RD  +G    + V+ K  + +  ++ R+D
Sbjct: 164 FETISQA---------LLNAADRDTMSGWGAVVYVVTKDSVTKRVLKTRQD 205


>gi|312136619|ref|YP_004003956.1| proteasome endopeptidase complex subunit beta [Methanothermus
           fervidus DSM 2088]
 gi|311224338|gb|ADP77194.1| proteasome endopeptidase complex, beta component [Methanothermus
           fervidus DSM 2088]
          Length = 211

 Score = 59.7 bits (143), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 15/156 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G   D + L + L A   +Y+ +  K  +    A + SN L+  R FP+    ++GG+D
Sbjct: 55  AGSVGDAQKLVEYLKAEVRLYKLRTGKPATVRAAASIASNILHASRMFPFIVQMLIGGID 114

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
             G   +Y+ D  G      Y S GSGS +    L+++ K               +S  +
Sbjct: 115 ETGPK-IYSVDPAGGKIEDKYVSTGSGSPIAYGVLEDRYKK-------------DMSVED 160

Query: 141 AVDLVKTCFASATERDIYTGDKLEI-VVLNKGGIHR 175
           A+++      S+T+RD ++GD + + VV  K G  R
Sbjct: 161 AINIALRAIKSSTKRDTFSGDGISLAVVTEKEGFKR 196


>gi|224063046|ref|XP_002300970.1| predicted protein [Populus trichocarpa]
 gi|118487526|gb|ABK95590.1| unknown [Populus trichocarpa]
 gi|222842696|gb|EEE80243.1| predicted protein [Populus trichocarpa]
          Length = 204

 Score = 59.3 bits (142), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 45/84 (53%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +  SG   D + L + L  RH +YQ +  + M     A L+S  LY KRF PY+  
Sbjct: 47  DKLFVGLSGLGTDAQTLYQRLVFRHKMYQLREERDMKPETFANLVSAVLYEKRFGPYFCQ 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYE 97
            V+ GLD++ K  + T D +G+ E
Sbjct: 107 PVIAGLDDDDKPFICTMDFIGAKE 130


>gi|374633123|ref|ZP_09705490.1| proteasome endopeptidase complex, archaeal, beta subunit
           [Metallosphaera yellowstonensis MK1]
 gi|373524607|gb|EHP69484.1| proteasome endopeptidase complex, archaeal, beta subunit
           [Metallosphaera yellowstonensis MK1]
          Length = 196

 Score = 59.3 bits (142), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 82/162 (50%), Gaps = 15/162 (9%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLG 77
           +  +G   D++AL +++ A    Y+  + + +S    A+LLS  LY  ++ P+ S  +  
Sbjct: 47  IGGAGLFGDLQALTRIMNANIRYYELYNGRPISARAAAKLLSIILYQYKYMPFISEVLFA 106

Query: 78  GLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLS 137
           G+D +G   ++  D +GS     Y++ GSG+ + +  L+ + K    L            
Sbjct: 107 GID-DGTPQLFVLDPLGSLLDDIYAAVGSGARVAIGVLEAEYKDSMNL------------ 153

Query: 138 EAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG-IHREYM 178
             +A +L      ++ ERD+ +GD +++++++K G I  E++
Sbjct: 154 -TQARELALKSLRASVERDVTSGDGIDLLIIDKNGKISEEFL 194


>gi|410721909|ref|ZP_11361231.1| proteasome endopeptidase complex, archaeal, beta subunit
           [Methanobacterium sp. Maddingley MBC34]
 gi|410598027|gb|EKQ52619.1| proteasome endopeptidase complex, archaeal, beta subunit
           [Methanobacterium sp. Maddingley MBC34]
          Length = 209

 Score = 59.3 bits (142), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 73/150 (48%), Gaps = 14/150 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G  +D ++L K + A   +++ ++ K+++    A L SN L+  R +P+Y   +LGG+D
Sbjct: 55  AGAVSDAQSLMKYIRAEVALFRLRNGKRINVEAAATLTSNILHSSRGYPFYVQTLLGGVD 114

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
           ++G   +Y+ D  G   +    S GSGS +    L+++                 L   E
Sbjct: 115 DKGP-ALYSLDPTGGVIKDLMISTGSGSPVAYGVLEDRYSE-------------DLYVEE 160

Query: 141 AVDLVKTCFASATERDIYTGDKLEIVVLNK 170
            +D+      SA ERD Y+G+ + +  + +
Sbjct: 161 GIDVAIRAIKSAMERDAYSGNSILVATITE 190


>gi|302771876|ref|XP_002969356.1| hypothetical protein SELMODRAFT_227897 [Selaginella moellendorffii]
 gi|300162832|gb|EFJ29444.1| hypothetical protein SELMODRAFT_227897 [Selaginella moellendorffii]
          Length = 239

 Score = 59.3 bits (142), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 18/166 (10%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQH--NKQMSCPGMAQLLSNTLYYKRFFPYY 71
           D   +  SG  AD + +   +  R+L++QH     +Q +    A+L+    Y  + F   
Sbjct: 56  DNVYICRSGSAADTQVISDYV--RYLLHQHTIVLGEQATVKAAAKLVREIAYSNKSFLEA 113

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
              ++GG D   KG ++     G+  RV ++  GSGST I  FLD   +       P   
Sbjct: 114 GM-IVGGWDKHEKGSIFGVPIGGTLLRVPFTIGGSGSTYIFGFLDQAWR-------PG-- 163

Query: 132 AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREY 177
               +S+ EA DLV    + A  RD  +G  +  V ++  G+ R+Y
Sbjct: 164 ----MSKQEAQDLVVKAVSLAMARDGGSGGVVRTVTISSAGVTRDY 205


>gi|15679213|ref|NP_276330.1| proteasome subunit beta [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|6685781|sp|O27270.1|PSB_METTH RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|2622311|gb|AAB85691.1| proteasome, beta subunit [Methanothermobacter thermautotrophicus
           str. Delta H]
          Length = 210

 Score = 59.3 bits (142), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 15/160 (9%)

Query: 12  RADKCVMAS-SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPY 70
           + D+ + A+ +G  AD ++L K L A   +Y+ ++++++S    A L +N L+  RF+P+
Sbjct: 45  KIDEHIAATIAGSVADAQSLMKYLKAEAALYRMRNSEKISIEAAAALAANILHSSRFYPF 104

Query: 71  YSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQ 130
               +LGG+D  G   +Y+ D  G      + S GSGS +    L+++            
Sbjct: 105 IVQTLLGGVDENG-AKIYSLDPSGGMIPDKFVSTGSGSPVAYGVLEDRYSD--------- 154

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 170
                L   EAVD+      SA ERD Y+G+ + +  + +
Sbjct: 155 ----ELYVDEAVDVAIRAIKSAMERDTYSGNGILVATVTE 190


>gi|403223804|dbj|BAM41934.1| proteasome subunit beta type [Theileria orientalis strain Shintoku]
          Length = 206

 Score = 59.3 bits (142), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 41/179 (22%), Positives = 77/179 (43%), Gaps = 30/179 (16%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D C  A+SG   D++ L+  +  +  +YQ +  KQM+   ++ ++   LY KRF P++  
Sbjct: 49  DNCFFAASGLATDIQTLKDEIMFKVNMYQMRGEKQMNVKTLSNMVGTMLYSKRFGPWFVD 108

Query: 74  NVLGGLDNEGKGCVYTYDAVGS------YERVGYSSQ---GSGSTLIMPFLDNQLKSPSP 124
           +V+ GLD++ +  +  +D VG+      +  VG  S+   G    L  P           
Sbjct: 109 SVIAGLDSKNEPYITCFDLVGAPCTPTDFVVVGTCSEQLYGVCEALFRP----------- 157

Query: 125 LLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                      L+  E  + +  C  +  +RD  +G   E+ V+    +    ++ R D
Sbjct: 158 ----------GLNADELFETISQCLMAGIDRDCLSGWGAEVHVITPDKVVSRSLKTRMD 206


>gi|288561233|ref|YP_003424719.1| proteasome beta subunit [Methanobrevibacter ruminantium M1]
 gi|302595755|sp|D3E0A3.1|PSB_METRM RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|288543943|gb|ADC47827.1| proteasome beta subunit [Methanobrevibacter ruminantium M1]
          Length = 207

 Score = 59.3 bits (142), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 17/152 (11%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G  AD + L K+++A   +Y+ ++ K +S    A + SN L+     P Y   ++GG+D
Sbjct: 55  AGSVADAQTLMKVISAETSLYRLRNGKDISLEAAAAVSSNILHSS---PAYVQTLIGGVD 111

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
           + G   +Y+ DA G   +  + S GSGST     L+++                 ++  E
Sbjct: 112 DTG-ASIYSLDAAGGMIKDTFISTGSGSTFAYGVLEDRFYE-------------DITVEE 157

Query: 141 AVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
           A ++      +ATERD ++G+   +  + K G
Sbjct: 158 ATEVAIRAIKAATERDTFSGNGFLVANVTKDG 189


>gi|410672077|ref|YP_006924448.1| proteasome endopeptidase complex [Methanolobus psychrophilus R15]
 gi|409171205|gb|AFV25080.1| proteasome endopeptidase complex [Methanolobus psychrophilus R15]
          Length = 210

 Score = 59.3 bits (142), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 81/167 (48%), Gaps = 15/167 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   M ++G   D + + ++++    +Y+ +  + M+  G+  +LSN L  +R++P    
Sbjct: 48  DFAAMTTAGSVGDAQQIVRIISVESKLYKMRRKESMTIKGLTTMLSNLLSGQRYYPLMVQ 107

Query: 74  NVLGGLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            ++GG D  G   +Y+ DA+ G+ +     + GSGS +    L+++ K            
Sbjct: 108 LLVGGYDKHGP-ELYSIDALGGNIDEKRVVATGSGSPIAYGVLEDRYKE----------- 155

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYME 179
              ++  E V+L      +A +RD  +GD +++V++ K    R  +E
Sbjct: 156 --NMTTQEGVELAVRALHNAMKRDSASGDGIDVVIITKDQFTRLELE 200


>gi|327311458|ref|YP_004338355.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
 gi|326947937|gb|AEA13043.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
          Length = 199

 Score = 59.3 bits (142), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 74/168 (44%), Gaps = 15/168 (8%)

Query: 11  CRADKCVMAS-SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFP 69
            + D+ V A+ SG  AD++ L   L      Y+ +H + +    +    S  L+Y R   
Sbjct: 36  WKIDEHVAATMSGGVADLQGLLSTLTILARDYKTEHRRPIPVKTLVNYASLLLFYSRPVI 95

Query: 70  YYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA 129
           Y   ++ GG D+EG   +Y  D +GSY    Y S GSGS   M  L+   +         
Sbjct: 96  YIVHSIFGGFDDEGP-QLYMLDWLGSYSEERYISTGSGSPYAMGVLEVGYRE-------- 146

Query: 130 QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREY 177
                 ++  EAV L +    +A   D  +G+ ++IV + K G  R +
Sbjct: 147 -----DMTVDEAVKLAENAVKAAMRNDPGSGEGIDIVTITKDGFRRVF 189


>gi|225459609|ref|XP_002285871.1| PREDICTED: proteasome subunit beta type-3-A isoform 1 [Vitis
           vinifera]
 gi|302141789|emb|CBI18992.3| unnamed protein product [Vitis vinifera]
          Length = 204

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 45/84 (53%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+  +  SG   D + L + L  RH +YQ +  + M     A L+S  LY KRF PY+  
Sbjct: 47  DRVFLGLSGLATDAQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQ 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYE 97
            V+ GL +E K  + T D++G+ E
Sbjct: 107 PVIAGLGDEDKPFICTMDSIGAKE 130


>gi|336477060|ref|YP_004616201.1| proteasome endopeptidase complex subunit beta [Methanosalsum
           zhilinae DSM 4017]
 gi|335930441|gb|AEH60982.1| proteasome endopeptidase complex, beta subunit [Methanosalsum
           zhilinae DSM 4017]
          Length = 210

 Score = 58.9 bits (141), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 81/171 (47%), Gaps = 19/171 (11%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   + ++G   D + + +L++    +Y+ +  + M+  G+  LLSN L  +R++P    
Sbjct: 48  DLVGLTTAGSVGDAQQIVRLISVESRLYKMRRQETMTIKGITTLLSNLLSGQRYYPLMVQ 107

Query: 74  NVLGGLDNEGKGCVYTYDAVGS-YERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            ++GG+D +G   +Y+ DA+G   E     + GSGS +    L+++              
Sbjct: 108 LLIGGVDKKGPN-LYSLDALGGMIEETNAVATGSGSPIAYGVLEDRYH------------ 154

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            T +S  E  DL      +A +RD  +G+ +++V +        YM + +D
Sbjct: 155 -TDMSIEEGADLAIRALHNAMKRDSASGNGIDVVCIT----DENYMHMEED 200


>gi|351723417|ref|NP_001237278.1| uncharacterized protein LOC100306084 [Glycine max]
 gi|255627485|gb|ACU14087.1| unknown [Glycine max]
          Length = 204

 Score = 58.9 bits (141), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 45/84 (53%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +  SG   D + L + L  RH +YQ +  + M     A L+S  LY KRF PY+  
Sbjct: 47  DKLFIGLSGLATDAQTLYQRLLFRHKLYQLREERDMKPQTFASLVSAILYEKRFGPYFCQ 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYE 97
            V+ GL ++ K  + T DA+G+ E
Sbjct: 107 PVIAGLGDDDKPFICTMDAIGAKE 130


>gi|45358258|ref|NP_987815.1| proteasome subunit beta [Methanococcus maripaludis S2]
 gi|340623725|ref|YP_004742178.1| proteasome subunit beta [Methanococcus maripaludis X1]
 gi|74555067|sp|Q6LZD4.1|PSB_METMP RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|44921015|emb|CAF30251.1| proteasome, subunit beta [Methanococcus maripaludis S2]
 gi|339903993|gb|AEK19435.1| proteasome subunit beta [Methanococcus maripaludis X1]
          Length = 219

 Score = 58.9 bits (141), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 14/161 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   M  +G   D ++L +L++A   IY+ +    M+      L+SN L+  R +P  + 
Sbjct: 53  DYIAMTIAGSVGDAQSLIRLISAEAKIYKMRTGNNMTPLSCTTLISNVLHGNRHYPLLTQ 112

Query: 74  NVLGGLDNEGKGCVYTYDAVGSY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            +LGG D      +++ D VG   E   +++ GSGS      L+++ KS   +      A
Sbjct: 113 LILGGYDLINGAKLFSLDPVGGINEESSFTATGSGSPTAYGVLESEYKSDIAIEKGLLIA 172

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
           V  LS             SA +RD Y+G+ + +  +NK G+
Sbjct: 173 VKALS-------------SAMQRDAYSGNGISLAHINKDGV 200


>gi|118431082|ref|NP_147287.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
 gi|121727671|sp|Q9YES4.2|PSB1_AERPE RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|116062408|dbj|BAA79472.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
          Length = 203

 Score = 58.9 bits (141), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 13/155 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+  +A +G   D+  L +++  +  +   +  K  +   +A+ LS+ LY  +FFP+   
Sbjct: 44  DRIGIAFAGLYGDMGGLVRIVEGQMRLASLETGKPATVRNVAKFLSSLLYSYKFFPFNVE 103

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++GG+D  G+  +Y  D +GS     Y + G+G+T     L++  K    L    + AV
Sbjct: 104 AIVGGIDPGGEPKLYVLDPLGSIIEEDYVAAGTGATTAFGLLEHVYKRGMSLEEAKKAAV 163

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVL 168
             L  + A             RD  TGD ++++VL
Sbjct: 164 EALRASMA-------------RDAGTGDGIDVLVL 185


>gi|20094664|ref|NP_614511.1| protease subunit of the proteasome [Methanopyrus kandleri AV19]
 gi|74559570|sp|Q8TW10.1|PSB_METKA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|19887825|gb|AAM02441.1| Protease subunit of the proteasome [Methanopyrus kandleri AV19]
          Length = 210

 Score = 58.9 bits (141), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 78/164 (47%), Gaps = 16/164 (9%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLY--YKRFFPYYSFNV 75
           + ++G  AD + +  L+ A   +Y+ +HN+ +S   +A ++S+ L+   K F PY    +
Sbjct: 53  VTTAGSVADAQKIVDLMRAEARLYELRHNRMISARALANMISHVLHSSLKAFRPYLVQLI 112

Query: 76  LGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP 135
           +GG  N+    +Y  D  GS     Y++ GSGS      L+ + +               
Sbjct: 113 VGGF-NDDDPALYNLDPSGSIIEEDYTATGSGSPTAYGVLEAEYEE-------------G 158

Query: 136 LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYME 179
           +S  +A+++      SA ERD  TG+ + +V + +   +RE  E
Sbjct: 159 MSLDDAIEVAVRAVKSALERDTGTGEGVTVVTITREEGYRELPE 202


>gi|195440110|ref|XP_002067892.1| GK22295 [Drosophila willistoni]
 gi|194163977|gb|EDW78878.1| GK22295 [Drosophila willistoni]
          Length = 212

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 82/167 (49%), Gaps = 8/167 (4%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCP-GMAQLLSNTLYYKRFFPYYSF 73
           + V+ S G   D  AL  L+ +  L Y+   N    CP  +A +L+ T   ++   Y+  
Sbjct: 52  QTVLGSVGCWCDTLALLSLVRSFSLKYELD-NLMPVCPDSLASMLTRTKLTRQ---YFVS 107

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            V+ G+D+ G G VY  D +G+Y R+ Y   G+G  +I+P L N  +      + A    
Sbjct: 108 TVVTGIDSNGLGAVYFNDPIGNYLRLPYHISGTGGRIILPTL-NWFEGNEEDHMNA--IT 164

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMEL 180
           T L+  + V +    F +A + D +TG+ + I ++ + G+  + + L
Sbjct: 165 TSLTVDKTVQISMEAFRAARDCDSFTGNCMFINIITREGVQFKQLPL 211


>gi|300711728|ref|YP_003737542.1| proteasome subunit beta [Halalkalicoccus jeotgali B3]
 gi|448296163|ref|ZP_21486224.1| proteasome subunit beta [Halalkalicoccus jeotgali B3]
 gi|299125411|gb|ADJ15750.1| proteasome beta subunit [Halalkalicoccus jeotgali B3]
 gi|445582886|gb|ELY37226.1| proteasome subunit beta [Halalkalicoccus jeotgali B3]
          Length = 247

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 16/159 (10%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G  +  ++L + L A   +Y  +  + MS   ++ L SN L    FF      VLGG+D
Sbjct: 93  AGSVSAAQSLIRTLRAEVNLYDARQGEDMSMTALSTLTSNLLRSGGFF--IVVPVLGGVD 150

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
           +EG   +Y+ DA+G      Y+  GSGS   +  L+   +               LS  E
Sbjct: 151 DEGP-HIYSMDALGGTTEETYAVSGSGSQFALGVLEQHYEE-------------GLSVEE 196

Query: 141 AVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYME 179
           A D+      SA ERD  +G+ + I  + + G+  E  E
Sbjct: 197 ARDVAIRSVGSAVERDTASGNGINIATVTEEGVDIERFE 235


>gi|302774543|ref|XP_002970688.1| hypothetical protein SELMODRAFT_227995 [Selaginella moellendorffii]
 gi|300161399|gb|EFJ28014.1| hypothetical protein SELMODRAFT_227995 [Selaginella moellendorffii]
          Length = 239

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 18/166 (10%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQH--NKQMSCPGMAQLLSNTLYYKRFFPYY 71
           D   +  SG  AD + +   +  R+L++QH     +Q +    A+L+    Y  + F   
Sbjct: 56  DNVYICRSGSAADTQVISDYV--RYLLHQHTIVLGEQATVKAAAKLVREIAYSNKSFLEA 113

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
              ++GG D   KG ++     G+  RV ++  GSGST I  FLD   +       P   
Sbjct: 114 GM-IVGGWDKHEKGSIFGVPIGGTLLRVPFTIGGSGSTYIFGFLDQAWR-------PG-- 163

Query: 132 AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREY 177
               +S+ EA DLV    + A  RD  +G  +  V ++  G+ R+Y
Sbjct: 164 ----MSKQEAQDLVVKAVSLAMARDGGSGGVVRTVTISSEGVTRDY 205


>gi|17380183|sp|O65084.1|PSB3_PICMA RecName: Full=Proteasome subunit beta type-3; AltName: Full=20S
           proteasome alpha subunit C; AltName: Full=20S proteasome
           subunit beta-3
 gi|2982322|gb|AAC32146.1| probable proteasome subunit [Picea mariana]
 gi|116784298|gb|ABK23292.1| unknown [Picea sitchensis]
          Length = 204

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 45/84 (53%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +  SG   DV+ L +  A RH +YQ +  + M     A L+S  LY KRF PY+  
Sbjct: 47  DKLYVGLSGLATDVQTLYQRFAFRHKLYQLREERNMRPETFASLVSALLYEKRFGPYFCQ 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYE 97
            V+ GL  + K  + T D++G+ E
Sbjct: 107 PVIAGLGEDDKPFICTMDSIGAKE 130


>gi|14594927|emb|CAC43324.1| putative beta 3 proteasome subunit [Nicotiana tabacum]
          Length = 178

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 45/84 (53%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +  SG   DV  L + L  RH +YQ +  + M     A L+S  LY KRF PY+  
Sbjct: 47  DKVFIGLSGLGTDVLTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQ 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYE 97
            V+ GL ++ K  + T D++G+ E
Sbjct: 107 PVIAGLGDDDKPFICTMDSIGAKE 130


>gi|282165069|ref|YP_003357454.1| proteasome subunit beta [Methanocella paludicola SANAE]
 gi|302595754|sp|D1Z199.1|PSB_METPS RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|282157383|dbj|BAI62471.1| proteasome subunit beta [Methanocella paludicola SANAE]
          Length = 205

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 15/161 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   M  +G   D + L ++L A   +++ + +  MS   ++ LLSN L+  R F  Y  
Sbjct: 47  DNIAMTIAGSVGDGQRLARMLQAESKLFELRRHGPMSINALSMLLSNLLWEYRIF--YIQ 104

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++GG+D  G        A G    V +SS GSGS L    L+++ K         QD  
Sbjct: 105 VLVGGVDKSGPKLFSLDPAGGRITEVKFSSTGSGSPLAYGVLEDRYK---------QD-- 153

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIH 174
             +S  + V+L      SA +RD  +G+ ++  V+  G + 
Sbjct: 154 --MSVEQGVELAAKALESAMKRDSASGNGMQFCVITPGKVE 192


>gi|21553663|gb|AAM62756.1| putative 20S proteasome beta subunit PBC2 [Arabidopsis thaliana]
          Length = 204

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 45/84 (53%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+  +  SG   DV+ L + L  RH +YQ +  + M     A L+S  LY KRF PY   
Sbjct: 47  DRVFIGLSGLATDVQTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYLCQ 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYE 97
            V+ GL ++ K  + T D++G+ E
Sbjct: 107 PVIAGLGDDDKPFICTMDSIGAKE 130


>gi|168036644|ref|XP_001770816.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162677875|gb|EDQ64340.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 204

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 46/84 (54%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +  SG   DV+ + + L  RH +YQ +  + M     A L+S  LY KRF PY+  
Sbjct: 47  DKLYIGLSGLATDVQTMHQRLQFRHKLYQLREERNMRPETFASLVSAILYEKRFGPYFCE 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYE 97
            ++ GL+++G   + T D +G+ +
Sbjct: 107 PIIAGLNDDGTPFICTTDLIGAKQ 130


>gi|18395025|ref|NP_564149.1| proteasome subunit beta type-3-A [Arabidopsis thaliana]
 gi|288558823|sp|Q9XI05.2|PSB3A_ARATH RecName: Full=Proteasome subunit beta type-3-A; AltName: Full=20S
           proteasome beta subunit C-1; AltName: Full=Proteasome
           component T
 gi|17473525|gb|AAL38246.1| proteasome subunit [Arabidopsis thaliana]
 gi|21387087|gb|AAM47947.1| proteasome subunit [Arabidopsis thaliana]
 gi|110740894|dbj|BAE98543.1| 20S proteasome beta subunit PBC2 like protein [Arabidopsis
           thaliana]
 gi|332192025|gb|AEE30146.1| proteasome subunit beta type-3-A [Arabidopsis thaliana]
          Length = 204

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 45/84 (53%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+  +  SG   DV+ L + L  RH +YQ +  + M     A L+S  LY KRF PY   
Sbjct: 47  DRVFIGLSGLATDVQTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYLCQ 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYE 97
            V+ GL ++ K  + T D++G+ E
Sbjct: 107 PVIAGLGDDDKPFICTMDSIGAKE 130


>gi|297845150|ref|XP_002890456.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|5263324|gb|AAD41426.1|AC007727_15 Identical to gb|Y13173 Arabidopsis thaliana mRNA for proteasome
           subunit. EST gb|T76747 comes from this gene [Arabidopsis
           thaliana]
 gi|12744997|gb|AAK06878.1|AF344327_1 putative 20S proteasome beta subunit PBC2 [Arabidopsis thaliana]
 gi|297336298|gb|EFH66715.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 204

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 45/84 (53%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+  +  SG   DV+ L + L  RH +YQ +  + M     A L+S  LY KRF PY   
Sbjct: 47  DRVFIGLSGLATDVQTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYLCQ 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYE 97
            V+ GL ++ K  + T D++G+ E
Sbjct: 107 PVIAGLGDDDKPFICTMDSIGAKE 130


>gi|41614998|ref|NP_963496.1| hypothetical protein NEQ203 [Nanoarchaeum equitans Kin4-M]
 gi|74579825|sp|Q74MP5.1|PSB_NANEQ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|40068722|gb|AAR39057.1| NEQ203 [Nanoarchaeum equitans Kin4-M]
          Length = 196

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 83/170 (48%), Gaps = 14/170 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D  ++A SG  AD++ + K+L     + +    + M+    A LLS+ LY  RF+     
Sbjct: 40  DYILLAGSGTVADLQHIAKILKTELKLRELYSRRTMNVIEAANLLSHLLYQNRFYLNPLG 99

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            ++ G  N  +  +Y+ D +G+   +  Y ++GSG  + +  L+ +  +P          
Sbjct: 100 LLIAGPINSKEFGIYSLDGIGAISEIKDYFAEGSGGVIALGTLEAEY-NPD--------- 149

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRK 182
              ++  +A+ L +    S+  RD+++G  +EI  + K G+ + ++E +K
Sbjct: 150 ---ITVRDAIKLAEKALKSSIARDVFSGYGIEIYTITKKGVEKLFLEAQK 196


>gi|224014869|ref|XP_002297096.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220968215|gb|EED86564.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 204

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 47/82 (57%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           +K  +  +G  +DV+ L +LL  R  +Y+ +  ++M+      LLSN LY KRF PY++ 
Sbjct: 47  EKLFVGLAGLASDVQTLDQLLRFRMNLYELREEREMTPKVFTNLLSNMLYEKRFGPYFAE 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGS 95
            V+ GLD   K  + T D +G+
Sbjct: 107 PVVAGLDENDKPYLATMDLIGA 128


>gi|399574445|ref|ZP_10768204.1| proteasome endopeptidase complex subunit beta [Halogranum salarium
           B-1]
 gi|399240277|gb|EJN61202.1| proteasome endopeptidase complex subunit beta [Halogranum salarium
           B-1]
          Length = 241

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 16/153 (10%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G  +  ++L + L A   +Y+ +  + MS   +A LL+N L    FF      +LGG+D
Sbjct: 93  AGSVSAAQSLIRSLKAETSLYETRRGQDMSMQALATLLANFLRSGAFFVVQP--ILGGVD 150

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
            EG   VY+ DA+G      Y+  GSGS   +  L+   +               LS  E
Sbjct: 151 EEGP-HVYSMDALGGMSEENYTVTGSGSQYALGVLEQHYEE-------------DLSIEE 196

Query: 141 AVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
           A  +      SA ERD+ +G+ + + V+   G+
Sbjct: 197 AKTVAAKAIQSAVERDLASGNGINVAVVTDEGV 229


>gi|159041872|ref|YP_001541124.1| proteasome endopeptidase complex protein [Caldivirga maquilingensis
           IC-167]
 gi|302595705|sp|A8M8R5.1|PSB2_CALMQ RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|157920707|gb|ABW02134.1| Proteasome endopeptidase complex [Caldivirga maquilingensis IC-167]
          Length = 200

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/167 (22%), Positives = 80/167 (47%), Gaps = 14/167 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           ++  +ASSG  AD++ + K++ A     + +  + +S    A+LLS  L+  ++ PY + 
Sbjct: 48  NRIGLASSGILADIQTITKVIRANIANMEIEMKRPVSVRAAAKLLSIMLFQNKYMPYIAE 107

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++GG+D EG   ++  D+ GS     +++ G+G+   +  ++    S            
Sbjct: 108 TMVGGIDEEGP-KLFILDSWGSLIEDDFAALGNGARTAIGLIETGYSS------------ 154

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMEL 180
             ++  EA +L       A  RD  +GD ++ +V+   G   + ++L
Sbjct: 155 -SITVKEAKELAIKAIKEAIARDPTSGDGIDTLVITGNGYLEDSIKL 200


>gi|19075485|ref|NP_587985.1| 20S proteasome component beta 3, Pup3 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|17380272|sp|Q9Y7T8.1|PSB3_SCHPO RecName: Full=Probable proteasome subunit beta type-3
 gi|4539605|emb|CAB40016.1| 20S proteasome component beta 3, Pup3 (predicted)
           [Schizosaccharomyces pombe]
          Length = 204

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 47/82 (57%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            DK  +  +G   DV+ L +L   +  +Y+ +  +Q+     A L+S+TLY KRF PY+S
Sbjct: 46  GDKTYLGLTGLATDVQTLYELFRYKVNLYKFREERQIQPKTFANLVSSTLYEKRFGPYFS 105

Query: 73  FNVLGGLDNEGKGCVYTYDAVG 94
           F V+ G+ N+    +  +D++G
Sbjct: 106 FPVVAGVSNDNTPFICGFDSIG 127


>gi|358388830|gb|EHK26423.1| hypothetical protein TRIVIDRAFT_86444 [Trichoderma virens Gv29-8]
          Length = 261

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 27/180 (15%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLI-------YQHQHNKQMSCPGMAQLLSNTLYYK 65
           AD  ++   GF  D+  +Q L   RHLI       Y+     +++   + + LS  LY +
Sbjct: 78  ADSSIL---GFSGDISDMQYL--DRHLIDLSLSEAYESPDKPRLNAANLHRYLSKLLYNR 132

Query: 66  R--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPS 123
           R  F P ++  ++GGLD+ G+  +   D +GS       + G G+ L  P +        
Sbjct: 133 RSKFDPLWNHLLVGGLDDNGEPFLAAADLLGSTYSAPSLATGFGAMLAQPIMRR------ 186

Query: 124 PLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              +P +++   LS  EA+++VK        RD  + D   + V+ K G+     EL++D
Sbjct: 187 --YVPDEESAKKLSREEAINIVKEAMKVLFYRDARSLDSYSLAVVTKDGV-----ELKED 239


>gi|116753407|ref|YP_842525.1| proteasome endopeptidase complex [Methanosaeta thermophila PT]
 gi|121694316|sp|A0B5B1.1|PSB_METTP RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|116664858|gb|ABK13885.1| proteasome endopeptidase complex, beta component, Threonine
           peptidase, MEROPS family T01A [Methanosaeta thermophila
           PT]
          Length = 207

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 19/175 (10%)

Query: 1   MGSFFYILTSCRA----DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQ 56
           MGSF    T+ +     D   + ++G   D +AL +++ A   +Y+ Q  + ++   +  
Sbjct: 29  MGSFIASRTAKKIYQIDDLVGLTTAGVVGDAQALVRMIQAEARLYRMQRGEPLTIKAITS 88

Query: 57  LLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS-YERVGYSSQGSGSTLIMPFL 115
           LLSN L  +R+FP+    V+GG+D  G   +++ DA+G   E     S GSGS +    L
Sbjct: 89  LLSNILSARRYFPFLVQLVVGGVDKMGPK-IFSLDALGGQIEEHDIVSTGSGSPIAYGVL 147

Query: 116 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 170
           ++ L  P    L  QD            L      +A +RD  +G+ + +V + K
Sbjct: 148 ES-LYKPG---LSIQDGSV---------LCVRAVHTAMKRDSASGNGIALVRITK 189


>gi|315427032|dbj|BAJ48649.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
 gi|343485700|dbj|BAJ51354.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
          Length = 201

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 78/158 (49%), Gaps = 14/158 (8%)

Query: 19  ASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGG 78
           A +G  AD++ + K + A   +Y+ +   + S   +A++LS  L+  R+FPY+   ++GG
Sbjct: 53  ACAGVVADMQNMIKEVTAVVNLYRLEQGVEPSVKTVAKILSWNLFGNRYFPYFMETIVGG 112

Query: 79  LDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSE 138
           +D++G   V   D +GS     Y+  G+G+ + +  ++N  +               +S 
Sbjct: 113 IDSQGP-HVIVLDPLGSMIEDDYAVVGTGAEVAVGVIENLYRK-------------DMSA 158

Query: 139 AEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHRE 176
            E  DL      ++  RD  +G+ +++++  + G+  E
Sbjct: 159 TEIRDLATKAIKASIARDAGSGNGIDLLLYTQKGLEAE 196


>gi|255938700|ref|XP_002560120.1| Pc14g01260 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211584741|emb|CAP74267.1| Pc14g01260 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 260

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 77/164 (46%), Gaps = 11/164 (6%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQM-SCPGMAQLLSNTLYYKR--FFP 69
            DK ++   G  +D++ L +LL +  +   + H+  M +   +   L+   Y +R  F P
Sbjct: 78  GDKAMVGFGGDVSDMQYLDRLLDSMDIKENYSHHGNMLNAKNLHTYLAKVFYKRRSEFNP 137

Query: 70  YYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA 129
            ++  ++ G D +G+  + + D +G+     + + G G+ L +P L  +    +PL    
Sbjct: 138 LWNHVLVAGFDGQGEPFLSSADLLGTTFSAPHLATGFGAHLAVPILRRKFPEGTPL---- 193

Query: 130 QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
                 +S+ +AV+ +K C      RD  + DK  I V+ K GI
Sbjct: 194 ----EQVSKEDAVEALKECLKVLFYRDARSADKYSIAVITKDGI 233


>gi|304315325|ref|YP_003850472.1| proteasome, subunit beta [Methanothermobacter marburgensis str.
           Marburg]
 gi|302588784|gb|ADL59159.1| predicted proteasome, subunit beta [Methanothermobacter
           marburgensis str. Marburg]
          Length = 210

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 15/160 (9%)

Query: 12  RADKCVMAS-SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPY 70
           + D+ + A+ +G  AD ++L K L A   +Y+ ++++++S    A L +N L+  RF+P+
Sbjct: 45  KIDEHIAATIAGSVADAQSLMKYLKAEAALYRMRNSERISIEAAAALAANILHSSRFYPF 104

Query: 71  YSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQ 130
               +LGG+D  G   +Y+ D  G      + S GSGS +    L+++            
Sbjct: 105 IVQTLLGGVDETG-AKIYSLDPSGGMIPDRFVSTGSGSPVAYGVLEDRYAD--------- 154

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 170
                L   +A+D+      SA ERD Y+G+ + +  + +
Sbjct: 155 ----ELYVDDAIDIAIRAIKSAMERDTYSGNGILVATVTE 190


>gi|150403635|ref|YP_001330929.1| proteasome endopeptidase complex [Methanococcus maripaludis C7]
 gi|159904582|ref|YP_001548244.1| proteasome endopeptidase complex [Methanococcus maripaludis C6]
 gi|302595750|sp|A9A788.1|PSB_METM6 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|302595838|sp|A6VK02.1|PSB_METM7 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|150034665|gb|ABR66778.1| Proteasome endopeptidase complex [Methanococcus maripaludis C7]
 gi|159886075|gb|ABX01012.1| Proteasome endopeptidase complex [Methanococcus maripaludis C6]
          Length = 219

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 14/162 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   M  +G   D ++L +L++A   IY+ +    M+      L+SN L+  R +P  + 
Sbjct: 53  DYIAMTIAGSVGDAQSLIRLISAEAKIYKMRTGNNMTPLSCTTLISNVLHGNRHYPLLTQ 112

Query: 74  NVLGGLDNEGKGCVYTYDAVGSY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            +LGG D      +++ D VG   E   +++ GSGS      L+ + +S   +      A
Sbjct: 113 LILGGYDLINGAKLFSLDPVGGINEESSFTATGSGSPTAYGVLEAEYRSDVTIDKGLLVA 172

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIH 174
           V  LS             SA +RD Y+G+ + +  +NK G++
Sbjct: 173 VKALS-------------SAMQRDAYSGNGISLAHINKDGVN 201


>gi|145590322|ref|YP_001152324.1| proteasome endopeptidase complex protein [Pyrobaculum arsenaticum
           DSM 13514]
 gi|302595706|sp|A4WH05.1|PSB1_PYRAR RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|145282090|gb|ABP49672.1| proteasome endopeptidase complex, beta component, Threonine
           peptidase, MEROPS family T01A [Pyrobaculum arsenaticum
           DSM 13514]
          Length = 202

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 13/157 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D      SG  AD++ +   L  R   Y+ Q  + +    +   +S  L+Y R + Y   
Sbjct: 40  DHVAATMSGGVADLQNILSFLTVRAREYKTQFRRPIPIRALVNYMSLILFYSRPYVYVVH 99

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           +++GG+D E    +Y  D +G+  +  Y + GSGS      L+   +             
Sbjct: 100 SIIGGVDEEEGAVMYMVDWLGTVTKEKYVATGSGSPYAKGVLEVGYRG------------ 147

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 170
             L+  EAVDL      +A   D  +G+ +++V + K
Sbjct: 148 -DLTVEEAVDLAINAIKAAIRNDPGSGEGIDVVTITK 183


>gi|379005397|ref|YP_005261069.1| 20S proteasome, alpha and beta subunits [Pyrobaculum oguniense TE7]
 gi|375160850|gb|AFA40462.1| 20S proteasome, alpha and beta subunits [Pyrobaculum oguniense TE7]
          Length = 202

 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 13/157 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D      SG  AD++ +   L  R   Y+ Q  + +    +   +S  L+Y R + Y   
Sbjct: 40  DHVAATMSGGVADLQNILSFLTVRAREYKTQFRRPIPIRALVNYMSLILFYSRPYVYVVH 99

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           +++GG+D E    +Y  D +G+  +  Y + GSGS      L+   +             
Sbjct: 100 SIIGGVDEEEGAVMYMVDWLGTVTKEKYVATGSGSPYAKGVLEVGYRG------------ 147

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 170
             L+  EAVDL      +A   D  +G+ +++V + K
Sbjct: 148 -DLTVEEAVDLAINAIKAAIRNDPGSGEGIDVVTITK 183


>gi|91694273|gb|ABE41788.1| 20S proteasome subunit [Trichoderma harzianum]
          Length = 261

 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 27/180 (15%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLI-------YQHQHNKQMSCPGMAQLLSNTLYYK 65
           AD  ++   GF  D+  +Q L   RHLI       Y+     +++   + + LS  LY +
Sbjct: 78  ADSSIV---GFSGDISDMQYL--DRHLIDLSLSEAYESPDKPRLNAANLHRYLSKLLYNR 132

Query: 66  R--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPS 123
           R  F P ++  ++GGLD+ G+  +   D +GS       + G G+ L  P +        
Sbjct: 133 RSKFDPLWNHLLIGGLDDNGEPFLAAADLLGSTYSAPSLATGFGAMLAQPIMRR------ 186

Query: 124 PLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              +P +++   LS  EA+++VK        RD  + D   + V+ K G+     EL++D
Sbjct: 187 --YVPDEESAKKLSREEAINIVKEAMKVLFYRDARSLDSYSLAVVTKEGV-----ELKQD 239


>gi|388491594|gb|AFK33863.1| unknown [Medicago truncatula]
          Length = 206

 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 45/84 (53%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +  SG   D + L + L  RH +YQ +  + M     A L+S+  Y KRF PY+  
Sbjct: 47  DKLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSSMQYEKRFGPYFCQ 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYE 97
            V+ GL ++ K  + T DA+G+ E
Sbjct: 107 PVIAGLGDDDKPFICTMDAIGAKE 130


>gi|357509159|ref|XP_003624868.1| Proteasome subunit beta type [Medicago truncatula]
 gi|355499883|gb|AES81086.1| Proteasome subunit beta type [Medicago truncatula]
          Length = 204

 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 45/84 (53%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +  SG   D + L + L  RH +YQ +  + M     A L+S+  Y KRF PY+  
Sbjct: 47  DKLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSSMQYEKRFGPYFCQ 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYE 97
            V+ GL ++ K  + T DA+G+ E
Sbjct: 107 PVIAGLGDDDKPFICTMDAIGAKE 130


>gi|224084924|ref|XP_002307450.1| predicted protein [Populus trichocarpa]
 gi|222856899|gb|EEE94446.1| predicted protein [Populus trichocarpa]
          Length = 204

 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 74/171 (43%), Gaps = 14/171 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +  SG   D + L + L  RH +YQ +  + M     A L+S  LY KRF PY+  
Sbjct: 47  DKVFVGLSGLGTDAQTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYFCQ 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            V+ GL ++ K  + T D +G+ E    +   GS S  +    +   K   P + P    
Sbjct: 107 PVIAGLGDDDKPFICTMDFIGAKELAKDFVVAGSASESLYGACEALFK---PDMEP---- 159

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                  E  ++V     ++ +RD  +G    I ++    I  + ++ R D
Sbjct: 160 ------EELFEVVSQALLASVDRDCLSGWGGHIYIVTPDEIREKILKGRMD 204


>gi|388513745|gb|AFK44934.1| unknown [Medicago truncatula]
          Length = 204

 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 45/84 (53%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +  SG   D + L + L  RH +YQ +  + M     A L+S+  Y KRF PY+  
Sbjct: 47  DKLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMRPETFASLVSSMQYEKRFGPYFCQ 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYE 97
            V+ GL ++ K  + T DA+G+ E
Sbjct: 107 PVIAGLGDDDKPFICTMDAIGAKE 130


>gi|167043167|gb|ABZ07876.1| putative Proteasome A-type and B-type [uncultured marine
           crenarchaeote HF4000_ANIW141J13]
          Length = 208

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 14/169 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   +  +G  AD + L  +L     ++  Q N+ +    +A+L S   +  R +P+ + 
Sbjct: 49  DHVGLTLAGGVADAQNLTDILRYHANVHAVQKNENIPIKSLARLCSLVFHQNRGYPFIAD 108

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            +LGG D +G   ++  D  GS E+  Y + GSGS +    L+++ +          D +
Sbjct: 109 ILLGGYDRDGP-ALFNIDMFGSVEKKSYVTTGSGSPVAYGVLEDEYR----------DDL 157

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRK 182
           T L +A+ + L      +A  R+I TGD + I  +NK G      E +K
Sbjct: 158 T-LEDAKLIAL--RAVKAAIVRNIGTGDGINIAAINKNGFQLLTKEQKK 203


>gi|397594765|gb|EJK56324.1| hypothetical protein THAOC_23819, partial [Thalassiosira oceanica]
          Length = 76

 Score = 56.6 bits (135), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 5/80 (6%)

Query: 104 QGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKL 163
           +  G+ +++P +DN +   + L     D    L   E V++VK  F +A ERDIYTGD +
Sbjct: 2   RAVGAVVLIPLMDNVISHKNRL-----DERRDLPAEEVVEIVKDAFLTAGERDIYTGDAV 56

Query: 164 EIVVLNKGGIHREYMELRKD 183
           +I+V+ K GI ++  +L+ D
Sbjct: 57  DIMVITKDGIDKQTFQLKAD 76


>gi|406605482|emb|CCH43126.1| putative proteasome subunit beta type-6 [Wickerhamomyces ciferrii]
          Length = 236

 Score = 56.6 bits (135), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 66/162 (40%), Gaps = 14/162 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK     SG  AD +A+  ++     +Y  QH K  S    A LL    Y  +       
Sbjct: 75  DKIWCCRSGSAADTQAVADIVKYHLELYTAQHGKPPSAKIAASLLQELTYTNKDALTAGL 134

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++ G D    G VY+    GS  +  ++  GSGS+ I  + D   K             
Sbjct: 135 -IVAGYDERSNGEVYSIPLGGSIHKQPFAIAGSGSSYIYGWTDENYKED----------- 182

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHR 175
              ++ EAVD VKT    A + D  +G  +  V+L K GI R
Sbjct: 183 --FTKEEAVDFVKTALTQAIQWDGSSGGVIRQVILTKDGIER 222


>gi|213409155|ref|XP_002175348.1| 20S proteasome component beta 3 [Schizosaccharomyces japonicus
           yFS275]
 gi|212003395|gb|EEB09055.1| 20S proteasome component beta 3 [Schizosaccharomyces japonicus
           yFS275]
          Length = 204

 Score = 56.6 bits (135), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 82/172 (47%), Gaps = 14/172 (8%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            +K  +  +G   DV+ L +L   +  +Y+ +  +Q+     A L+S+TLY KRF PY++
Sbjct: 46  TEKTYLGLTGLATDVQTLHELFRYKINMYKLREERQIEPKTFANLVSSTLYEKRFAPYFT 105

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
           F ++ GL    +  +  +D++G  +    ++  G+ S  +    ++ L  P    L  +D
Sbjct: 106 FPIVAGLSKTNEPFICGFDSIGCIDFAKDFAVSGTASDHLYGICED-LYEPD---LEPED 161

Query: 132 AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
               +S+A           +A +RD  +G    + V++K    +  ++ R+D
Sbjct: 162 LFETISQA---------LLNAIDRDCISGWGCVVYVISKDKCMKRLVKGRQD 204


>gi|71029220|ref|XP_764253.1| proteasome subunit beta type 3 [Theileria parva strain Muguga]
 gi|68351207|gb|EAN31970.1| proteasome subunit beta type 3, putative [Theileria parva]
          Length = 206

 Score = 56.6 bits (135), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/179 (22%), Positives = 78/179 (43%), Gaps = 30/179 (16%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           + C  A+SG   DV+ L++ +  +  +Y+ + +K+MS   ++ ++   LY +RF P++  
Sbjct: 49  ESCFFAASGLATDVQTLKEEIMFKVNMYKLRGDKEMSVKTLSNMVGAMLYSRRFGPWFVD 108

Query: 74  NVLGGLDNEGKGCVYTYDAVGS------YERVGYSSQ---GSGSTLIMPFLDNQLKSPSP 124
           +V+ GLDN+    +  +D VG+      +   G  S+   G    L  P +D     P  
Sbjct: 109 SVIAGLDNDSSPYITCFDLVGAPCTPSDFVVAGTCSEQLYGVCEALFKPGMD-----PEQ 163

Query: 125 LLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           L                 + V  C  +  +RD  +G   E+ V+    +    ++ R D
Sbjct: 164 LF----------------ETVSQCLMAGIDRDCLSGWGAEVHVITPDRVISRSLKTRMD 206


>gi|296242983|ref|YP_003650470.1| proteasome endopeptidase complex subunit beta [Thermosphaera
           aggregans DSM 11486]
 gi|296095567|gb|ADG91518.1| proteasome endopeptidase complex, beta component [Thermosphaera
           aggregans DSM 11486]
          Length = 206

 Score = 56.6 bits (135), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 80/170 (47%), Gaps = 19/170 (11%)

Query: 16  CVMASSGFQADVKALQKLLAARHLI--YQHQHNKQMSCPGMAQLLSNTL-YYKRFFPYYS 72
             M  SG  AD + L +   A+++   Y+ +  K++S   +A  +S  L  Y RF P+  
Sbjct: 48  AAMTISGLVADAQFLVE--NAKYIAKDYELKMGKRISIDALASRISLILSAYLRFSPFIV 105

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
             +LGG+D+EG   +Y  D  GS  R  + S GSGS +    L+   +            
Sbjct: 106 QLLLGGVDHEGP-KLYYMDLYGSVSRERFMSTGSGSPVAFGVLEQGYREG---------- 154

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRK 182
              L+  EA +L     +SA  RD +TG+ ++IVV+   GI  E    +K
Sbjct: 155 ---LTLEEAKELAFKAVSSAIMRDSFTGEGVDIVVIGPEGISEETRLFKK 201


>gi|448729804|ref|ZP_21712116.1| proteasome beta subunit [Halococcus saccharolyticus DSM 5350]
 gi|445794125|gb|EMA44678.1| proteasome beta subunit [Halococcus saccharolyticus DSM 5350]
          Length = 237

 Score = 56.6 bits (135), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 82/184 (44%), Gaps = 23/184 (12%)

Query: 3   SFFYILTSCRADKCV-------MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMA 55
           SF  +++S +A K         +  SG  +  +AL   L A   +Y+ + +++MS   ++
Sbjct: 64  SFGNMVSSKQAKKIAEIHPRGALTISGAVSPAQALISNLRAEVDLYEARRSEEMSMQALS 123

Query: 56  QLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFL 115
            L SN L    FF  +   +LGG+D+EG   +Y+ D  GS     Y++ GSGS      L
Sbjct: 124 TLTSNFLRSGAFFIVHP--ILGGVDDEGS-HIYSIDPSGSVMEEDYNATGSGSPFAYGVL 180

Query: 116 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHR 175
           + Q +               LS  EA  +      SA ERD  +G+ + +  +   G+  
Sbjct: 181 EQQYEE-------------GLSNDEAETVAAHAVKSAVERDTASGNGIIVSTITDEGVTT 227

Query: 176 EYME 179
           E  E
Sbjct: 228 EEYE 231


>gi|305662490|ref|YP_003858778.1| proteasome endopeptidase complex subunit beta [Ignisphaera
           aggregans DSM 17230]
 gi|304377059|gb|ADM26898.1| proteasome endopeptidase complex, beta component [Ignisphaera
           aggregans DSM 17230]
          Length = 236

 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 81/174 (46%), Gaps = 19/174 (10%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           +   +  +G  AD + L   + A    Y + +N+ MS   MA LL   L   ++FP+   
Sbjct: 70  ENSAITIAGLVADAQTLADYIRAEAYYYYYINNRPMSIRSMASLLGLILNEYKYFPFIVQ 129

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            +LGG D      +++ D  G      Y++ GSGS + +  +++  +             
Sbjct: 130 LILGGYDYYEGAKLFSIDYFGDVTEERYTATGSGSPIAIGVIESGYRP------------ 177

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGD-KLEIVVLNKGGIHREYM----ELRK 182
             +S  +AV LV    A+A+ RD+++G   +++VV+ K   +RE      E+RK
Sbjct: 178 -EMSIDDAVSLVVKAVATASMRDVFSGGIGVDVVVIGK-DFYREMTFQGEEIRK 229


>gi|48477758|ref|YP_023464.1| proteasome beta subunit [Picrophilus torridus DSM 9790]
 gi|74567841|sp|Q6L181.1|PSB_PICTO RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|48430406|gb|AAT43271.1| proteasome beta subunit [Picrophilus torridus DSM 9790]
          Length = 210

 Score = 56.2 bits (134), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 15/154 (9%)

Query: 16  CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNV 75
             M  +G   D + L + + A   +Y+ Q    M     A LLSN L   +F+PY    +
Sbjct: 48  AAMTIAGLVGDAQVLVRYMKAEMELYRVQRKVSMPIDAAATLLSNMLNQTKFYPYMVQLL 107

Query: 76  LGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP 135
           +GG D   K  +++ DA G      Y+S GSGS  +   L+ + +               
Sbjct: 108 VGGYDT--KPHIFSIDAAGGSVEDIYASTGSGSPFVYGVLEAEYQK-------------N 152

Query: 136 LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 169
           +S  + ++LV    ++A +RD  +G+ L++ V++
Sbjct: 153 MSLDDGINLVIKAISAAKQRDSASGNMLQLGVVD 186


>gi|302501488|ref|XP_003012736.1| hypothetical protein ARB_00987 [Arthroderma benhamiae CBS 112371]
 gi|291176296|gb|EFE32096.1| hypothetical protein ARB_00987 [Arthroderma benhamiae CBS 112371]
          Length = 238

 Score = 56.2 bits (134), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 18/170 (10%)

Query: 14  DKCVMASS---GFQADVKALQ---KLLAARHLI--YQHQHNKQMSCPGMAQLLSNTLYYK 65
           D  V+AS    GF  DV  +Q   ++L +  +   Y       ++   +   LS  LY +
Sbjct: 50  DGVVIASDNLVGFGGDVSDMQYIDRVLNSLDIQENYSTYGEHSLNAKNLHTYLSKLLYQR 109

Query: 66  R--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPS 123
           R  F P ++  ++ GLD+EGK  + + D +G+       + G G+ L +P L        
Sbjct: 110 RSKFDPLWNHILVAGLDDEGKPFLSSADLLGTTYSAPALATGFGAHLAVPILRR------ 163

Query: 124 PLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
             L P ++ +  +++ +AVD +K C      RD  + D+  I V+ K G+
Sbjct: 164 --LFPEENGIDNITKEQAVDAMKQCMRVLFYRDARSSDRYSIAVVTKDGV 211


>gi|340517515|gb|EGR47759.1| proteasome, subunit beta 4 [Trichoderma reesei QM6a]
          Length = 261

 Score = 56.2 bits (134), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 19/171 (11%)

Query: 22  GFQADVKALQKLLAARHLI-------YQHQHNKQMSCPGMAQLLSNTLYYKR--FFPYYS 72
           GF  D+  +Q L   RHLI       Y+     ++S   + + L+  LY +R  F P ++
Sbjct: 84  GFSGDISDMQYL--DRHLIDLSLSEAYESPDKPRLSAANLHRYLAKLLYSRRSKFDPLWN 141

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
             ++GGLD+ G+  +   D +GS       + G G+ L  P +           +P +++
Sbjct: 142 HLLVGGLDDAGEPFLAAADLLGSTYSAPSLATGFGAMLAQPIMRR--------YVPDEES 193

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              LS  EAV++VK        RD  + D   + V+ K G+  +  E  +D
Sbjct: 194 AKNLSREEAVNIVKEAMKVLFYRDARSLDSYSLAVVTKDGVELKENEKLED 244


>gi|150400488|ref|YP_001324254.1| proteasome endopeptidase complex protein [Methanococcus aeolicus
           Nankai-3]
 gi|302595768|sp|A6UT20.1|PSB_META3 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|150013191|gb|ABR55642.1| Proteasome endopeptidase complex [Methanococcus aeolicus Nankai-3]
          Length = 217

 Score = 56.2 bits (134), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 14/161 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   M  +G   D ++L ++++A   +Y+ +    +     A LLSN L+  R FP+   
Sbjct: 53  DYMAMTIAGSVGDAQSLVRIISAEANLYKLRTGNNIPPHSCAMLLSNVLHGSRHFPFLIQ 112

Query: 74  NVLGGLDNEGKGCVYTYDAVGSY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            ++GG D      +++ DAVG   E   +++ GSGS      L+ + K    +      A
Sbjct: 113 LIIGGYDTIHGAKLFSLDAVGGLNEETSFTATGSGSPTAFGVLEEEYKKDMTINKGKLLA 172

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
           +  L+             +A +RD ++G+ + + V++K G+
Sbjct: 173 IKSLT-------------AAMKRDAFSGNGISLAVIDKNGV 200


>gi|145341760|ref|XP_001415971.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144576194|gb|ABO94263.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 206

 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 47/82 (57%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+  +  +G  AD   L + L  +H +Y+ + N+ MS      ++S TLY KRF PYY+ 
Sbjct: 48  DRLYLGLTGLIADQLTLAQKLKFKHDMYELRENRVMSPKVFGAVVSATLYEKRFSPYYTE 107

Query: 74  NVLGGLDNEGKGCVYTYDAVGS 95
            V+ GLD +GK  + + D +G+
Sbjct: 108 PVVAGLDADGKPYITSMDLIGA 129


>gi|448456459|ref|ZP_21595228.1| 20S proteasome A and B subunits [Halorubrum lipolyticum DSM 21995]
 gi|445811935|gb|EMA61932.1| 20S proteasome A and B subunits [Halorubrum lipolyticum DSM 21995]
          Length = 243

 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 19/150 (12%)

Query: 27  VKALQKL---LAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEG 83
           V A Q L   L A   +Y+ +  K MS   ++ L  N L    F  Y    +LGG+D+EG
Sbjct: 98  VSAAQNLISTLKAETSLYETRRGKDMSMEALSTLTGNLLRSGAF--YIVQPILGGVDDEG 155

Query: 84  KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 143
              +Y+ DA+G      Y+  GSGS   +  L+ +            D VT     EA +
Sbjct: 156 A-HIYSIDALGGTTEEEYTVTGSGSQYALGVLEQEY----------HDEVTV---DEATE 201

Query: 144 LVKTCFASATERDIYTGDKLEIVVLNKGGI 173
           +      SA ERD+ +G+ + + V+   G+
Sbjct: 202 IAAKAIQSAVERDLASGNGINVAVVTDDGV 231


>gi|327304495|ref|XP_003236939.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
 gi|326459937|gb|EGD85390.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
          Length = 261

 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 14/175 (8%)

Query: 5   FYILTSCRA--DKCVMASSGFQADVKALQKLLAARHLI--YQHQHNKQMSCPGMAQLLSN 60
           F  L   RA  +  V+   G  +D++ + ++L +  +   Y       ++   +   LS 
Sbjct: 68  FTDLKRLRAFDNSSVVGFGGDVSDMQYIDRVLNSLDIQENYSTYGEHSLNAKNLHTYLSK 127

Query: 61  TLYYKR--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ 118
            LY +R  F P ++  ++ GLD+EGK  + + D +G+       + G G+ L +P L   
Sbjct: 128 LLYQRRSKFDPLWNHILVAGLDDEGKPFLSSADLLGTTYSAPALATGFGAHLAVPILRR- 186

Query: 119 LKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
                  L P +D +  +++  AVD +K C      RD  + D+  I V+ K G+
Sbjct: 187 -------LFPEEDGIDNITKERAVDAMKQCMRVLFYRDARSSDRYSIAVVTKDGV 234


>gi|307106214|gb|EFN54460.1| hypothetical protein CHLNCDRAFT_31571 [Chlorella variabilis]
          Length = 225

 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 75/170 (44%), Gaps = 23/170 (13%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGM---AQLLSNTLY-YKRFF 68
           AD   +  SG  AD +A+   +  R+   QH+   Q + PG+   AQL+    Y YK   
Sbjct: 55  ADNVYLLRSGSAADTQAVADYV--RYFTEQHEMQLQRT-PGVRTVAQLVREMNYQYKHLV 111

Query: 69  PYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLP 128
                 ++ G D +  G VY     G+  R  +++ GSGST I  FLD++ K        
Sbjct: 112 ---GAMIVAGWDEDEGGQVYGCPIGGTISREPWTTDGSGSTFIWGFLDSEFKD------- 161

Query: 129 AQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYM 178
                  +   +A DLV    A A  RD  +G  + +V ++K G  R  +
Sbjct: 162 ------GMGRQDAEDLVAMALALAMSRDGSSGGVIRLVTVSKEGATRRLI 205


>gi|294495429|ref|YP_003541922.1| proteasome endopeptidase complex, beta component [Methanohalophilus
           mahii DSM 5219]
 gi|302595753|sp|D5EAS6.1|PSB_METMS RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|292666428|gb|ADE36277.1| proteasome endopeptidase complex, beta component [Methanohalophilus
           mahii DSM 5219]
          Length = 210

 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 85/180 (47%), Gaps = 19/180 (10%)

Query: 1   MGSFFYILTSCRA----DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQ 56
           MG+F    T+ +     D   M ++G   D + L ++++    +Y+ +  + ++  G+  
Sbjct: 31  MGNFIASKTAKKIYQIDDLVGMTTAGSVGDAQQLVRMISVESKLYKMRRQESITIKGLTT 90

Query: 57  LLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIMPFL 115
           LLSN L  +R+FP     ++GG+D  G   +++ DA+ G+ E     + GSGS +    L
Sbjct: 91  LLSNILGGQRYFPLMVQLLVGGVDKNGP-AIFSLDAMGGNIEETKAVATGSGSPMAYGVL 149

Query: 116 DNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHR 175
           +++                 ++  E ++L      +A +RD  +G+ +++V +   G  R
Sbjct: 150 EDRYHE-------------GINVDEGMELAVRALYNAMKRDSASGNGIDVVKITADGYKR 196


>gi|296805317|ref|XP_002843483.1| proteasome component Pre4 [Arthroderma otae CBS 113480]
 gi|238844785|gb|EEQ34447.1| proteasome component Pre4 [Arthroderma otae CBS 113480]
          Length = 266

 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 20/169 (11%)

Query: 22  GFQADVKALQ---KLLAARHLI--YQHQHNKQMSCPGMAQLLSNTLYYKR--FFPYYSFN 74
           GF  DV  +Q   ++L +  +   Y       ++   +   LS  LY +R  F P ++  
Sbjct: 89  GFGGDVSDMQYIDRVLNSLDIQENYSTYGEHSLNAKNLHTYLSKLLYKRRSDFDPLWNHI 148

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 134
           ++ GLD EGK  + + D +G+       + G G+ L +P L          L P +D + 
Sbjct: 149 LVAGLDGEGKPFLSSADLLGTTYSAPSLATGFGAHLAIPILRR--------LFPEEDGIE 200

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            +++ +A+D +K C      RD  + D+  I V+ K G+     EL++D
Sbjct: 201 NITKEQAIDAMKQCMKVLFYRDARSSDRYSIAVVTKEGV-----ELKED 244


>gi|149463382|ref|XP_001520474.1| PREDICTED: proteasome subunit beta type-1-like [Ornithorhynchus
           anatinus]
          Length = 66

 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 34/50 (68%)

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            PL+  +A+ LVK  F SA ERD+YTGD L+I ++ K GI  E + LR+D
Sbjct: 17  VPLTLGKALQLVKDVFISAAERDVYTGDALKICIVTKDGIQEETISLRRD 66


>gi|399218578|emb|CCF75465.1| unnamed protein product [Babesia microti strain RI]
          Length = 192

 Score = 55.8 bits (133), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/171 (20%), Positives = 78/171 (45%), Gaps = 14/171 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           +KC   SSG   D++++ K L  +  I++ +  + +    +  +++N LY +RF P++  
Sbjct: 35  NKCFFGSSGLATDIQSILKELKFKIKIFELEQERDIGIQSLGHVVANMLYSRRFGPWFIS 94

Query: 74  NVLGGLDNEGKGCVYTYDAVGS-YERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            ++ GLD++ +  + +YD +G+  +   +   GS S  +    ++   S           
Sbjct: 95  PIVAGLDDKNRPFISSYDLIGAPSDSDDFVVSGSCSDQLFGICESLHHS----------- 143

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              ++E E  +    C  +  +RD  +G    + V+    I  + ++ R D
Sbjct: 144 --GMNEDELFETTSQCLLAGLDRDCLSGWGAVVHVITPKKIITKTIQTRMD 192


>gi|384249780|gb|EIE23261.1| proteasome subunit [Coccomyxa subellipsoidea C-169]
          Length = 227

 Score = 55.8 bits (133), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 18/169 (10%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQH--QHNKQMSCPGMAQLLSNTLYYKRFFPY 70
           +D   M  SG  AD +A+   +  RH    H  +  +      +A+L++   Y  +    
Sbjct: 51  SDNAYMLRSGSAADTQAIADYV--RHYTAMHSMELGRDPKIKSVAKLVAQINYSNKNLLM 108

Query: 71  YSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQ 130
            +  ++GG D EG G ++     G+  +  +++ GSGST I  +LD+  +          
Sbjct: 109 GAM-IVGGWDPEGGGQIFGVPISGTLVQQDWTTDGSGSTYIWGYLDSAYRD--------- 158

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYME 179
                +S  EA +LVKT  A A  RD  +G    ++ + K G  R  ++
Sbjct: 159 ----GMSREEAEELVKTALALAMSRDGSSGGLARLITITKAGAERRMIK 203


>gi|171184537|ref|YP_001793456.1| proteasome endopeptidase complex protein [Pyrobaculum neutrophilum
           V24Sta]
 gi|302595728|sp|B1YA36.1|PSB1_THENV RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|170933749|gb|ACB39010.1| Proteasome endopeptidase complex [Pyrobaculum neutrophilum V24Sta]
          Length = 201

 Score = 55.8 bits (133), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 13/157 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D      SG  AD++++   L  R   Y+ ++ + +    +   +S  L+Y R + Y   
Sbjct: 40  DHVAATMSGGVADLQSVLSFLTLRAREYKMEYKRPIPIRALVNYVSLILFYSRPYIYIVH 99

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           +++GG+D+E    +Y  D +G+  +  Y + GSGS    P+    L+      +  +D  
Sbjct: 100 SIIGGVDDEEGAVLYMADWLGTVTKERYIATGSGS----PYAKGALEVGYREDMSLED-- 153

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNK 170
                  AVDL      +A   D  +G+ +++VV+ K
Sbjct: 154 -------AVDLAIKAVKAAIRNDPGSGEGIDVVVITK 183


>gi|385806007|ref|YP_005842405.1| proteasome subunit Beta [Fervidicoccus fontis Kam940]
 gi|383795870|gb|AFH42953.1| proteasome subunit Beta [Fervidicoccus fontis Kam940]
          Length = 211

 Score = 55.8 bits (133), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 15/160 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  + ++G  AD + L   L  +         + ++    A LLS  LY  + FP+Y  
Sbjct: 58  DKMALTTAGLVADAQVLADWLNTQMNYLTITKKQPVTVREAAHLLSLLLYRYKLFPFYVQ 117

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            +LGG D   +  +++ D  GS     Y+S GSGS + +  L++  +             
Sbjct: 118 LILGGYDTAPR--LFSLDLYGSLVEEKYTSTGSGSPIAIGVLEDGYRE------------ 163

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
             +S  EA  L       A +RD  TGD ++ V++   GI
Sbjct: 164 -NMSPEEARKLAVKAVQMALKRDSATGDGVDSVIITSEGI 202


>gi|257075968|ref|ZP_05570329.1| proteasome beta subunit [Ferroplasma acidarmanus fer1]
          Length = 210

 Score = 55.8 bits (133), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 15/152 (9%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLG 77
           M  +G   D + L + + A   +Y+ Q    M     A LLSN L   +++PY    ++G
Sbjct: 50  MTIAGLVGDAQVLVRYMRAEMELYRVQRKINMPIEAAATLLSNMLNQSKYYPYMVQLLVG 109

Query: 78  GLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLS 137
           G D   K  +++ DA G      Y+S GSGS  +   L+ + +    L            
Sbjct: 110 GFDK--KPHIFSIDAAGGSVEDEYASTGSGSPFVYGVLEAEYQPNMKL------------ 155

Query: 138 EAEAVDLVKTCFASATERDIYTGDKLEIVVLN 169
             +A++L     + A +RD  +G+ L+I V++
Sbjct: 156 -DDAINLAIKAISVAKQRDSASGNMLQIGVID 186


>gi|326472773|gb|EGD96782.1| proteasome subunit beta [Trichophyton tonsurans CBS 112818]
 gi|326484953|gb|EGE08963.1| proteasome component Pre4 [Trichophyton equinum CBS 127.97]
          Length = 261

 Score = 55.5 bits (132), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 14/175 (8%)

Query: 5   FYILTSCRA--DKCVMASSGFQADVKALQKLLAARHLI--YQHQHNKQMSCPGMAQLLSN 60
           F  L   RA  +  V+   G  +D++ + ++L +  +   Y       ++   +   LS 
Sbjct: 68  FTDLKRLRAFDNSSVVGFGGDVSDMQYIDRVLNSLDIQENYSTYGEHSLNAKNLHTYLSK 127

Query: 61  TLYYKR--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ 118
            LY +R  F P ++  ++ GLD+EGK  + + D +G+       + G G+ L +P L   
Sbjct: 128 LLYQRRSKFDPLWNHILVAGLDDEGKPFLSSADLLGTTYSAPALATGFGAHLAVPILRR- 186

Query: 119 LKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
                  L P +D +  +++  AVD +K C      RD  + D+  I V+ K G+
Sbjct: 187 -------LFPEEDGIDNITKERAVDAMKQCMRVLFYRDARSSDRYSIAVVTKEGV 234


>gi|66358224|ref|XP_626290.1| possible proteasome component [Cryptosporidium parvum Iowa II]
 gi|46228012|gb|EAK88932.1| possible proteasome component [Cryptosporidium parvum Iowa II]
          Length = 204

 Score = 55.5 bits (132), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 76/173 (43%), Gaps = 16/173 (9%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           + K +M  SG   D+  L  L+  +  +Y  +  +++    ++ + ++ LY KRF PY+ 
Sbjct: 46  SSKTLMGFSGLATDIHTLTNLIKFKTNLYHLREEREIGVKALSHMTASILYSKRFSPYFV 105

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVG-YSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
             ++ GLDN     +  YD +G       ++  G+         DNQ      L    + 
Sbjct: 106 EPIVAGLDNNNVPFIAGYDLIGCLSVCSEFAISGTA--------DNQ------LFGICES 151

Query: 132 AVTP-LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              P L   E +++V  C  S  +RD ++G   ++ +L    +  + ++ R D
Sbjct: 152 YYRPDLEPDELMEIVSQCMLSGIDRDAFSGWGCKVYLLTPEKLVTKTLKSRMD 204


>gi|12323391|gb|AAG51672.1|AC010704_16 putative 20S proteasome beta subunit PBC2; 7006-8626 [Arabidopsis
           thaliana]
          Length = 191

 Score = 55.5 bits (132), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 44/84 (52%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   +  SG   DV+ L + L  RH +YQ +  + M     A L+S  LY KRF P+   
Sbjct: 34  DHLFIGLSGLATDVQTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQ 93

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYE 97
            V+ GL ++ K  + T D++G+ E
Sbjct: 94  PVIAGLGDDNKPFICTMDSIGAKE 117


>gi|259484729|tpe|CBF81200.1| TPA: hypothetical proteasome beta 7 subunit (Eurofung) [Aspergillus
           nidulans FGSC A4]
          Length = 260

 Score = 55.5 bits (132), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 76/163 (46%), Gaps = 11/163 (6%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQ-HNKQMSCPGMAQLLSNTLYYKR--FFPY 70
           D  V+  SG  +D++ + +LL +  +   +  H  Q++   +   LS   Y +R  F P 
Sbjct: 79  DAAVIGFSGDVSDMQYIDRLLESIDIRENYSVHGNQLNAKNLHTYLSKVFYKRRSDFNPL 138

Query: 71  YSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQ 130
           ++  ++ G D+E K  + + D +G+     + + G G+ L +P L          L P +
Sbjct: 139 WNHILVAGFDSEKKPFLSSADLLGTTFSAPHLATGFGAHLAIPILRR--------LFPEE 190

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
             +  +S+ +AV  +K C      RD  + DK  + ++ + GI
Sbjct: 191 RPIEEISKEDAVSALKDCLKVLWYRDARSMDKYSLALITQEGI 233


>gi|168037918|ref|XP_001771449.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162677176|gb|EDQ63649.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 204

 Score = 55.5 bits (132), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 45/84 (53%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   +  SG   DV+ + + L  RH +YQ +  + M     A L+S  LY KRF PY+  
Sbjct: 47  DHLYIGLSGLATDVQTMHQRLNFRHKLYQLREERNMRPETFASLVSAMLYEKRFGPYFCE 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYE 97
            ++ GL+++G   + T D +G+ +
Sbjct: 107 PIIAGLNDDGTPFICTTDLIGAKQ 130


>gi|67606993|ref|XP_666789.1| proteasome component [Cryptosporidium hominis TU502]
 gi|54657844|gb|EAL36555.1| proteasome component [Cryptosporidium hominis]
          Length = 202

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 76/173 (43%), Gaps = 16/173 (9%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           + K +M  SG   D+  L  L+  +  +Y  +  +++    ++ + ++ LY KRF PY+ 
Sbjct: 44  SSKTLMGFSGLATDIHTLTNLIKFKTNLYHLREEREIGVKALSHMTASILYSKRFSPYFV 103

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVG-YSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
             ++ GLDN     +  YD +G       ++  G+         DNQ      L    + 
Sbjct: 104 EPIVAGLDNNNVPFIAGYDLIGCLSVCSEFAISGTA--------DNQ------LFGICES 149

Query: 132 AVTP-LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              P L   E +++V  C  S  +RD ++G   ++ +L    +  + ++ R D
Sbjct: 150 YYRPDLEPDELMEIVSQCMLSGIDRDAFSGWGCKVYLLTPEKLVTKTLKSRMD 202


>gi|67539226|ref|XP_663387.1| hypothetical protein AN5783.2 [Aspergillus nidulans FGSC A4]
 gi|40743686|gb|EAA62876.1| hypothetical protein AN5783.2 [Aspergillus nidulans FGSC A4]
          Length = 551

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 76/163 (46%), Gaps = 11/163 (6%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQ-HNKQMSCPGMAQLLSNTLYYKR--FFPY 70
           D  V+  SG  +D++ + +LL +  +   +  H  Q++   +   LS   Y +R  F P 
Sbjct: 370 DAAVIGFSGDVSDMQYIDRLLESIDIRENYSVHGNQLNAKNLHTYLSKVFYKRRSDFNPL 429

Query: 71  YSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQ 130
           ++  ++ G D+E K  + + D +G+     + + G G+ L +P L          L P +
Sbjct: 430 WNHILVAGFDSEKKPFLSSADLLGTTFSAPHLATGFGAHLAIPILRR--------LFPEE 481

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
             +  +S+ +AV  +K C      RD  + DK  + ++ + GI
Sbjct: 482 RPIEEISKEDAVSALKDCLKVLWYRDARSMDKYSLALITQEGI 524


>gi|448472548|ref|ZP_21601172.1| 20S proteasome A and B subunits [Halorubrum aidingense JCM 13560]
 gi|445819852|gb|EMA69686.1| 20S proteasome A and B subunits [Halorubrum aidingense JCM 13560]
          Length = 243

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 69/150 (46%), Gaps = 19/150 (12%)

Query: 27  VKALQKL---LAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEG 83
           V A Q L   L A   +Y+ +  K MS   ++ L  N L    FF      +LGG+D++G
Sbjct: 98  VSAAQNLISTLKAETSLYETRRGKDMSMEALSTLTGNLLRTGAFFIVQP--ILGGVDDDG 155

Query: 84  KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 143
              +Y+ DA+G      Y+  GSGS   +  L+ +            D VT + EAE + 
Sbjct: 156 A-HIYSIDALGGTTEEEYTVTGSGSQYALGVLEQEY----------HDDVT-IEEAETI- 202

Query: 144 LVKTCFASATERDIYTGDKLEIVVLNKGGI 173
                  SA ERD+ +G+ + + V+   G+
Sbjct: 203 -AAKAIQSAVERDLASGNGINVAVVTDDGV 231


>gi|18411547|ref|NP_565156.1| proteasome subunit beta type-3-B [Arabidopsis thaliana]
 gi|79321410|ref|NP_001031294.1| proteasome subunit beta type-3-B [Arabidopsis thaliana]
 gi|17380184|sp|O81153.1|PSB3B_ARATH RecName: Full=Proteasome subunit beta type-3-B; AltName: Full=20S
           proteasome beta subunit C-2
 gi|14326552|gb|AAK60320.1|AF385730_1 At1g77440/T5M16_3 [Arabidopsis thaliana]
 gi|3421109|gb|AAC32069.1| 20S proteasome beta subunit PBC2 [Arabidopsis thaliana]
 gi|19548049|gb|AAL87388.1| At1g77440/T5M16_3 [Arabidopsis thaliana]
 gi|332197856|gb|AEE35977.1| proteasome subunit beta type-3-B [Arabidopsis thaliana]
 gi|332197857|gb|AEE35978.1| proteasome subunit beta type-3-B [Arabidopsis thaliana]
          Length = 204

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 44/84 (52%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   +  SG   DV+ L + L  RH +YQ +  + M     A L+S  LY KRF P+   
Sbjct: 47  DHLFIGLSGLATDVQTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQ 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYE 97
            V+ GL ++ K  + T D++G+ E
Sbjct: 107 PVIAGLGDDNKPFICTMDSIGAKE 130


>gi|302764110|ref|XP_002965476.1| hypothetical protein SELMODRAFT_266913 [Selaginella moellendorffii]
 gi|302823097|ref|XP_002993203.1| hypothetical protein SELMODRAFT_272317 [Selaginella moellendorffii]
 gi|300138973|gb|EFJ05723.1| hypothetical protein SELMODRAFT_272317 [Selaginella moellendorffii]
 gi|300166290|gb|EFJ32896.1| hypothetical protein SELMODRAFT_266913 [Selaginella moellendorffii]
          Length = 204

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 46/84 (54%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +  +G  +DV+ L + L  RH ++Q Q  + M     +  +S TLY KRF PY+  
Sbjct: 47  DKLYVGLAGLASDVQTLYQRLKYRHNLFQLQEERDMRPETFSNFVSATLYEKRFGPYFVQ 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYE 97
            ++ GL  + K  + T D++G+ E
Sbjct: 107 PLIAGLGADNKPYICTMDSIGAIE 130


>gi|363756318|ref|XP_003648375.1| hypothetical protein Ecym_8276 [Eremothecium cymbalariae
           DBVPG#7215]
 gi|356891575|gb|AET41558.1| Hypothetical protein Ecym_8276 [Eremothecium cymbalariae
           DBVPG#7215]
          Length = 215

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 15/162 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK     SG  AD +A+  ++     +Y  Q+  + S    A L S   Y  + F     
Sbjct: 58  DKIWCCRSGSAADTQAVADIVQHHLDLYAAQYG-EPSVNTAASLFSTICYENKDFLTAGI 116

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++ G D++ KG VYT    GS  +  Y+  GSGST I  + D   K             
Sbjct: 117 -IVAGYDDKNKGEVYTIPLGGSVHKAPYAIAGSGSTFIYGYCDKNFKE------------ 163

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHR 175
             +S+ E +  +K   + A + D  +G  + +VVL K G+ R
Sbjct: 164 -NMSKEETIRFMKHSLSQAIKWDGSSGGVIRMVVLTKEGVER 204


>gi|448468124|ref|ZP_21599755.1| 20S proteasome A and B subunits [Halorubrum kocurii JCM 14978]
 gi|445810867|gb|EMA60881.1| 20S proteasome A and B subunits [Halorubrum kocurii JCM 14978]
          Length = 243

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 19/150 (12%)

Query: 27  VKALQKL---LAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEG 83
           V A Q L   L A   +Y+ +  K M+   ++ L  N L    F  Y    +LGG+D+EG
Sbjct: 98  VSAAQSLISTLKAETSLYETRRGKDMTMEALSTLTGNLLRSGAF--YIVQPILGGVDDEG 155

Query: 84  KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 143
              +Y+ DA+G      Y+  GSGS   +  L+ +            D VT     EA +
Sbjct: 156 A-HIYSIDALGGTTEEEYTVTGSGSQYALGVLEQEY----------HDDVTV---DEATE 201

Query: 144 LVKTCFASATERDIYTGDKLEIVVLNKGGI 173
           +      SA ERD+ +G+ + + V+ + G+
Sbjct: 202 IAAKAIQSAVERDLASGNGINVAVVTEDGV 231


>gi|297839603|ref|XP_002887683.1| hypothetical protein ARALYDRAFT_895633 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297333524|gb|EFH63942.1| hypothetical protein ARALYDRAFT_895633 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 204

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 44/84 (52%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   +  SG   DV+ L + L  RH +YQ +  + M     A L+S  LY KRF P+   
Sbjct: 47  DHLFIGLSGLATDVQTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQ 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYE 97
            V+ GL ++ K  + T D++G+ E
Sbjct: 107 PVIAGLGDDNKPFICTMDSIGAKE 130


>gi|167045028|gb|ABZ09692.1| putative Proteasome A-type and B-type [uncultured marine
           crenarchaeote HF4000_APKG8G15]
          Length = 210

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 14/169 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   +  +G  AD + L  +L     I+  Q N+ +    +A+L S   +  R +P+ + 
Sbjct: 51  DHVGLTLAGGVADAQNLTDILRYHANIHAVQKNENIPIRSLARLCSLVFHQNRGYPFIAD 110

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            +LGG D +G   ++  D  GS E+  Y + GSGS +    L+++ +          D +
Sbjct: 111 ILLGGYDQDGP-QLFNIDMFGSVEKKSYVTTGSGSPVAYGVLEDEYR----------DDL 159

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRK 182
           T L +A+ + L      +A  R+I TGD + I  ++K G      E +K
Sbjct: 160 T-LEDAKGIAL--RAVKAAIVRNIGTGDGINIAAIDKNGFQLLTKEQKK 205


>gi|359415410|ref|ZP_09207873.1| proteasome subunit beta [Candidatus Haloredivivus sp. G17]
 gi|358034267|gb|EHK02709.1| proteasome subunit beta [Candidatus Haloredivivus sp. G17]
          Length = 215

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 15/127 (11%)

Query: 47  KQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYD-AVGSYERVGYSSQG 105
           K++S  G   LLSN L+  +  PY +  +LGGL++ G G ++  D A G  E   +++ G
Sbjct: 89  KELSVRGAGTLLSNILHSSKMMPYMNQFILGGLED-GNGKLFDLDPAGGLMEHNYFTATG 147

Query: 106 SGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEI 165
           SGS +    L++  +               +  +E ++L K    SA ERD  +G+ + +
Sbjct: 148 SGSQMAYGVLEDHYEE-------------DMGHSEGLELAKKAIKSAMERDTASGNGIMV 194

Query: 166 VVLNKGG 172
           V + + G
Sbjct: 195 VEITEDG 201


>gi|330834117|ref|YP_004408845.1| proteasome endopeptidase complex [Metallosphaera cuprina Ar-4]
 gi|329566256|gb|AEB94361.1| proteasome endopeptidase complex [Metallosphaera cuprina Ar-4]
          Length = 217

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 18/171 (10%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+  M ++G  AD++ +   +   +       N+ ++   +A  L+N L   ++FPY   
Sbjct: 62  DRIGMTTAGSVADLQFIYNYMKNIYHYNVISGNRPVTVKSLATYLTNVLSQSKYFPYLVQ 121

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++GG D + +  ++  D +G      Y + GSGS + M  L              +D  
Sbjct: 122 ILIGGYDTQPR--LFNLDYLGDMTEETYVATGSGSPVAMGVL--------------EDGY 165

Query: 134 TP-LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG-IHREYMELRK 182
            P LS  EA+DL      SA +RD +TG  + +  L+K G + RE    RK
Sbjct: 166 RPDLSGEEAMDLGARAVLSAIKRDSFTGTGVIVTKLSKDGHVEREIYPNRK 216


>gi|332796202|ref|YP_004457702.1| Proteasome endopeptidase complex [Acidianus hospitalis W1]
 gi|332693937|gb|AEE93404.1| Proteasome endopeptidase complex [Acidianus hospitalis W1]
          Length = 209

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 15/169 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   + ++G  AD++ L  +L   +       N+  +   +A  L+NTL   ++FPY   
Sbjct: 50  DNIGITTAGSVADLQFLYYVLKNLYHYNYISGNRPTTVKALATYLANTLSQNKYFPYLVQ 109

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++GG D + +  +Y  D  G      Y + GSGS + M  L+++ +             
Sbjct: 110 ILIGGYDTQPR--LYNLDYFGDMTEEKYVATGSGSPVAMGVLEDEYRE------------ 155

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRK 182
             L+  +A+D+      SA +RD YTG  + +  + K G   + + LRK
Sbjct: 156 -DLTADQAMDIAARAVLSAIKRDSYTGTGVIVSKITKTGHVEKEVYLRK 203


>gi|448428541|ref|ZP_21584273.1| 20S proteasome A and B subunits [Halorubrum terrestre JCM 10247]
 gi|448450269|ref|ZP_21592168.1| 20S proteasome A and B subunits [Halorubrum litoreum JCM 13561]
 gi|448481610|ref|ZP_21604961.1| 20S proteasome A and B subunits [Halorubrum arcis JCM 13916]
 gi|448507503|ref|ZP_21615014.1| 20S proteasome A and B subunits [Halorubrum distributum JCM 9100]
 gi|448523281|ref|ZP_21618634.1| 20S proteasome A and B subunits [Halorubrum distributum JCM 10118]
 gi|155212701|gb|ABT17422.1| proteasome beta subunit [Halorubrum sp. TP009]
 gi|445676010|gb|ELZ28535.1| 20S proteasome A and B subunits [Halorubrum terrestre JCM 10247]
 gi|445698458|gb|ELZ50502.1| 20S proteasome A and B subunits [Halorubrum distributum JCM 9100]
 gi|445701680|gb|ELZ53656.1| 20S proteasome A and B subunits [Halorubrum distributum JCM 10118]
 gi|445812121|gb|EMA62117.1| 20S proteasome A and B subunits [Halorubrum litoreum JCM 13561]
 gi|445821863|gb|EMA71647.1| 20S proteasome A and B subunits [Halorubrum arcis JCM 13916]
          Length = 243

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 19/151 (12%)

Query: 27  VKALQKLLA---ARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEG 83
           V A Q L++   A   +Y+ +  K MS   ++ L  N L    FF      +LGG+D+EG
Sbjct: 98  VSAAQNLISTLRAETSLYEARRGKDMSMEALSTLTGNLLRSGAFFVVQP--ILGGVDDEG 155

Query: 84  KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 143
              +Y+ DA+G      Y+  GSGS   +  L+ +            D VT + EA+ + 
Sbjct: 156 A-HIYSIDALGGTTEEEYTVTGSGSQYALGVLEQEY----------DDDVT-IDEAKTI- 202

Query: 144 LVKTCFASATERDIYTGDKLEIVVLNKGGIH 174
                  SA ERD+ +G+ + + V+   G+ 
Sbjct: 203 -AAKAIQSAVERDLASGNGINVAVVTDDGVE 232


>gi|126465830|ref|YP_001040939.1| 20S proteasome subunits A/B [Staphylothermus marinus F1]
 gi|302595722|sp|A3DN21.1|PSB1_STAMF RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|126014653|gb|ABN70031.1| 20S proteasome, A and B subunits [Staphylothermus marinus F1]
          Length = 213

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 74/163 (45%), Gaps = 15/163 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G   D + + + L      Y+ Q  +++   G+A++LS  LY  +  P  +  V+GG D
Sbjct: 63  AGLVGDAQFIIRALRMEAENYELQLGREIRVRGLAKILSLILYSYKLAPLMTEVVVGGFD 122

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
            +G   +Y  D VGS     Y + GSG  + +  ++ + +               +   E
Sbjct: 123 EKGP-QIYVLDPVGSLIEDKYVALGSGGPIALGIIEKEYRE-------------DIDVDE 168

Query: 141 AVDLVKTCFASATERDIYTGDKLEIVVLNKGGIH-REYMELRK 182
           A  L  +    A ERD  +GD ++++ + + G   REYM  R+
Sbjct: 169 AEKLAVSAIREAIERDAVSGDGVDVLRITEEGYSLREYMFRRE 211


>gi|425770055|gb|EKV08530.1| Proteasome subunit beta type [Penicillium digitatum Pd1]
 gi|425771747|gb|EKV10184.1| Proteasome subunit beta type [Penicillium digitatum PHI26]
          Length = 260

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 76/164 (46%), Gaps = 11/164 (6%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQ-HNKQMSCPGMAQLLSNTLYYKR--FFP 69
            DK ++   G  +D++ L +LL +  +   +  H   ++   +   L+   Y +R  F P
Sbjct: 78  GDKAIVGFGGDVSDMQYLDRLLDSMDIKENYSPHGNMLNAKNLHTYLAKVFYKRRSEFNP 137

Query: 70  YYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA 129
            ++  ++ G D +G+  + + D +G+     + + G G+ L +P L  +    +PL    
Sbjct: 138 LWNHVLVAGFDAQGEPFLSSADLLGTTFSAPHLATGFGAHLAVPILRRKFPEGTPL---- 193

Query: 130 QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
                 +S+ +A++ +K C      RD  + DK  I V+ K GI
Sbjct: 194 ----EQVSKEDAIEALKECLKVLFYRDARSTDKYSIAVITKDGI 233


>gi|49388033|dbj|BAD25149.1| Proteasome subunit beta type 3 [Oryza sativa Japonica Group]
 gi|215768995|dbj|BAH01224.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 204

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 43/84 (51%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +  SG   D + L + L  RH +YQ +  + M     A L+S  LY KRF PY+  
Sbjct: 47  DKLYIGLSGLATDAQTLYQRLVFRHKLYQLREERDMKPQAFASLVSALLYEKRFGPYFCQ 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYE 97
            V+ GL +  +  + T D +G+ E
Sbjct: 107 PVIAGLGDNDEPFICTMDCIGAKE 130


>gi|448503545|ref|ZP_21613174.1| 20S proteasome A and B subunits [Halorubrum coriense DSM 10284]
 gi|445691746|gb|ELZ43929.1| 20S proteasome A and B subunits [Halorubrum coriense DSM 10284]
          Length = 243

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 68/150 (45%), Gaps = 19/150 (12%)

Query: 27  VKALQKLLA---ARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEG 83
           V A Q L++   A   +Y+ + +K MS   ++ L  N L    FF      +LGG+D+EG
Sbjct: 98  VSAAQNLISTLRAETSLYEARRSKDMSMEALSTLTGNLLRSGAFFVVQP--ILGGVDDEG 155

Query: 84  KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 143
              +Y+ DA+G      Y+  GSGS   +  L+ +                 +S  EA  
Sbjct: 156 A-HIYSIDALGGTTEEEYTVTGSGSQYALGVLEQEYDD-------------EVSIDEAKT 201

Query: 144 LVKTCFASATERDIYTGDKLEIVVLNKGGI 173
           +      SA ERD+ +G+ + + V+   G+
Sbjct: 202 IAAKAIQSAVERDLASGNGINVAVVTDDGV 231


>gi|448445494|ref|ZP_21590392.1| 20S proteasome A and B subunits [Halorubrum saccharovorum DSM 1137]
 gi|445685018|gb|ELZ37380.1| 20S proteasome A and B subunits [Halorubrum saccharovorum DSM 1137]
          Length = 243

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 19/150 (12%)

Query: 27  VKALQKL---LAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEG 83
           V A Q L   L A   +Y+ +  K MS   ++ L  N L    F  Y    +LGG+D+EG
Sbjct: 98  VSAAQHLISTLKAETSLYETRRGKDMSMEALSTLTGNLLRSGAF--YIVQPILGGVDDEG 155

Query: 84  KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 143
              +Y+ DA+G      Y+  GSGS   +  L+ +            D VT     EA +
Sbjct: 156 A-HIYSIDALGGTTEEEYTVTGSGSQYALGVLEQEY----------HDDVTV---DEATE 201

Query: 144 LVKTCFASATERDIYTGDKLEIVVLNKGGI 173
           +      SA ERD+ +G+ + + V+   G+
Sbjct: 202 IAAKAIQSAVERDLASGNGINVAVVTDEGV 231


>gi|330318776|gb|AEC11048.1| 20S proteasome beta subunit pbc2 [Camellia sinensis]
          Length = 187

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 45/84 (53%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +  +G   D + + + L  RH +YQ +  + M     A L+S  LY KRF PY+  
Sbjct: 30  DKLSIGLAGLATDSQTMYQRLVFRHKLYQLREERDMKPQTFASLVSALLYEKRFGPYFCQ 89

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYE 97
            V+ GL ++ K  + T D++G+ E
Sbjct: 90  PVIAGLGDDDKPFICTMDSIGAKE 113


>gi|50290063|ref|XP_447463.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49526773|emb|CAG60400.1| unnamed protein product [Candida glabrata]
          Length = 205

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 82/165 (49%), Gaps = 15/165 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G   DV  L +L   +  +Y+ + ++ +      QL+S+TLY +RF PY+   V+ G++
Sbjct: 54  TGLATDVTTLNELFRYKTNLYKLREDRPIEPETFTQLVSSTLYERRFGPYFVGPVVAGIN 113

Query: 81  NE-GKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSE 138
           ++ GK  +  +D +G  +    +   G+ S  +    ++ L  P+   L A+D    +S+
Sbjct: 114 SKSGKPFIAGFDLIGCIDEAKDFIVSGTASDQLFGMCES-LYEPN---LEAEDLFETISQ 169

Query: 139 AEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           A           +A +RD  +G    + ++ K  + + Y+++R+D
Sbjct: 170 A---------LLNAADRDALSGWGAVVYIIKKDKVVKRYLKMRQD 205


>gi|84997075|ref|XP_953259.1| proteasome beta 3 subunit [Theileria annulata strain Ankara]
 gi|65304255|emb|CAI76634.1| proteasome beta 3 subunit, putative [Theileria annulata]
          Length = 220

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/172 (22%), Positives = 77/172 (44%), Gaps = 14/172 (8%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            + C  A+SG   DV+ L+  +  +  +Y+ + +K+MS   ++ ++ + LY +RF P++ 
Sbjct: 62  TESCFFAASGLATDVQTLKDEIMFKVNMYKLRGDKEMSVKTLSNMVGSMLYSRRFGPWFV 121

Query: 73  FNVLGGLDNEGKGCVYTYDAVGS-YERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
            +V+ GLD +    +  +D VG+      +   G+ S  +    +   K   P + P Q 
Sbjct: 122 DSVIAGLDTDSSPYITCFDLVGAPCTPTDFVVAGTCSEQLYGVCEALFK---PGMDPEQ- 177

Query: 132 AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                      + V  C  +  +RD  +G   E+ V+    +    ++ R D
Sbjct: 178 ---------LFETVSQCLMAGIDRDCLSGWGAEVHVITPDRVISRSLKTRMD 220


>gi|110668567|ref|YP_658378.1| proteasome beta subunit [Haloquadratum walsbyi DSM 16790]
 gi|385804032|ref|YP_005840432.1| proteasome subunit beta [Haloquadratum walsbyi C23]
 gi|121689658|sp|Q18GX3.1|PSB_HALWD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|109626314|emb|CAJ52772.1| proteasome beta subunit [Haloquadratum walsbyi DSM 16790]
 gi|148508113|gb|ABQ75907.1| proteasome beta subunit [uncultured haloarchaeon]
 gi|339729524|emb|CCC40787.1| proteasome beta subunit [Haloquadratum walsbyi C23]
          Length = 243

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 23/161 (14%)

Query: 27  VKALQKLLA---ARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEG 83
           V A Q L++   A   +Y+ +  + MS   ++ LL N L    FF      +LGG+D++G
Sbjct: 98  VSAAQSLISSIRAEVRLYEARRGEDMSMEALSTLLGNFLRSGGFFIVQP--ILGGVDDDG 155

Query: 84  KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 143
              +Y+ D  GS     Y+  GSGS   +  L+ Q                 LS  EA  
Sbjct: 156 P-HIYSIDPAGSIIEEEYTVTGSGSQYALGVLEQQYNE-------------DLSIEEAKT 201

Query: 144 LVKTCFASATERDIYTGDKLEIVVLNKGGI----HREYMEL 180
           +      SA ERD+ +G+ + + V+ + G+    H ++ EL
Sbjct: 202 VAARSIESAVERDLASGNGINVCVVTEDGVEITQHEDFEEL 242


>gi|302660913|ref|XP_003022130.1| hypothetical protein TRV_03733 [Trichophyton verrucosum HKI 0517]
 gi|291186061|gb|EFE41512.1| hypothetical protein TRV_03733 [Trichophyton verrucosum HKI 0517]
          Length = 170

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 10/127 (7%)

Query: 49  MSCPGMAQLLSNTLYYKR--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGS 106
           ++   +   LS  LY +R  F P ++  ++ GLD+EGK  + + D +G+       + G 
Sbjct: 25  LNAKNLHTYLSKLLYQRRSKFDPLWNHILVAGLDDEGKPFLSSADLLGTTYSAPALATGF 84

Query: 107 GSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIV 166
           G+ L +P L          L P ++ +  +++ +AVD +K C      RD  + D+  I 
Sbjct: 85  GAHLAVPILRR--------LFPEENGIDNITKEQAVDAMKQCMRVLFYRDARSSDRYSIA 136

Query: 167 VLNKGGI 173
           V+ K G+
Sbjct: 137 VVTKEGV 143


>gi|358395880|gb|EHK45267.1| hypothetical protein TRIATDRAFT_38957 [Trichoderma atroviride IMI
           206040]
          Length = 261

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 24/171 (14%)

Query: 22  GFQADVKALQKLLAARHLI-------YQHQHNKQMSCPGMAQLLSNTLYYKR--FFPYYS 72
           GF  D+  +Q L   RHL        Y+     +++   + + LS  LY +R  F P ++
Sbjct: 84  GFSGDISDMQYL--DRHLTELSLSEAYESPDKPRLNAANLHRYLSKLLYNRRSKFDPLWN 141

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
             ++GGLD+ G+  +   D +GS       + G G+ L  P +           +P +++
Sbjct: 142 HLLVGGLDDNGEPFLAAADLLGSTYSAPSLATGFGAMLAQPIMRR--------YVPDEES 193

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              LS  EAVD+VK        RD  +     + V+ K G+     EL++D
Sbjct: 194 AKKLSREEAVDIVKEAMKVLFYRDARSMSTYSLAVVTKDGV-----ELKED 239


>gi|242064246|ref|XP_002453412.1| hypothetical protein SORBIDRAFT_04g005590 [Sorghum bicolor]
 gi|241933243|gb|EES06388.1| hypothetical protein SORBIDRAFT_04g005590 [Sorghum bicolor]
          Length = 204

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 43/84 (51%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +  SG   D + L + L  RH +YQ +  + M     A L+S  LY KRF PY+  
Sbjct: 47  DKLYIGLSGLATDAQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQ 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYE 97
            V+ GL +  +  + T D +G+ E
Sbjct: 107 PVIAGLGDNNEPFICTMDCIGAKE 130


>gi|18312192|ref|NP_558859.1| proteasome subunit beta [Pyrobaculum aerophilum str. IM2]
 gi|74565305|sp|Q8ZYF2.1|PSB1_PYRAE RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|18159629|gb|AAL63041.1| proteasome beta subunit [Pyrobaculum aerophilum str. IM2]
          Length = 202

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 14/170 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D      SG  AD++++   L  R   Y+ ++ + +    +   +S  L+Y R + Y   
Sbjct: 40  DHVAATMSGGVADLQSVLSFLTLRAHEYKIEYKRPIPISALVNYMSLILFYSRPYIYIVH 99

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           +++GG+D E    +Y  D +G+  +  Y + GSGS    P+    L+      +  +D  
Sbjct: 100 SIIGGVDEEEGAVLYMVDWLGTVTKEKYIATGSGS----PYAKGALEVGYREDMTLED-- 153

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN-KGGIHREYMELRK 182
                  AVDL      +A   D  +G+ +++VV+  K G  R +   +K
Sbjct: 154 -------AVDLAIKAVKAAIRNDPGSGEGIDVVVITRKEGFKRVFTTQQK 196


>gi|315045598|ref|XP_003172174.1| hypothetical protein MGYG_09061 [Arthroderma gypseum CBS 118893]
 gi|311342560|gb|EFR01763.1| hypothetical protein MGYG_09061 [Arthroderma gypseum CBS 118893]
          Length = 261

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 15/159 (9%)

Query: 22  GFQADVKALQKLLAARHLI-----YQHQHNKQMSCPGMAQLLSNTLYYKR--FFPYYSFN 74
           GF  D+  +Q +    + +     Y       ++   +   LS  LY +R  F P ++  
Sbjct: 84  GFGGDISDMQYIDRVLNTLDIQENYSTYGEHSLNAKNLHTYLSKLLYQRRSKFDPLWNHI 143

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 134
           ++ GLD+EGK  + + D +G+       + G G+ L +P L          L P +D + 
Sbjct: 144 LVAGLDDEGKPFLSSADLLGTTYSAPALATGFGAHLAVPILRR--------LFPEEDGID 195

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
            +++  AVD +K C      RD  + D+  I V+ K G+
Sbjct: 196 NITKEAAVDAMKQCMRVLFYRDARSSDRYSIAVVTKEGV 234


>gi|125538349|gb|EAY84744.1| hypothetical protein OsI_06114 [Oryza sativa Indica Group]
 gi|125581051|gb|EAZ21982.1| hypothetical protein OsJ_05637 [Oryza sativa Japonica Group]
          Length = 213

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 43/84 (51%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +  SG   D + L + L  RH +YQ +  + M     A L+S  LY KRF PY+  
Sbjct: 56  DKLYIGLSGLATDAQTLYQRLVFRHKLYQLREERDMKPQAFASLVSALLYEKRFGPYFCQ 115

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYE 97
            V+ GL +  +  + T D +G+ E
Sbjct: 116 PVIAGLGDNDEPFICTMDCIGAKE 139


>gi|115469154|ref|NP_001058176.1| Os06g0643100 [Oryza sativa Japonica Group]
 gi|17380214|sp|Q9LST7.1|PSB3_ORYSJ RecName: Full=Proteasome subunit beta type-3; AltName: Full=20S
           proteasome alpha subunit C; AltName: Full=20S proteasome
           subunit beta-3
 gi|8671506|dbj|BAA96836.1| beta 3 subunit of 20S proteasome [Oryza sativa Japonica Group]
 gi|51535468|dbj|BAD37365.1| 20S proteasome subunit beta type 3 [Oryza sativa Japonica Group]
 gi|113596216|dbj|BAF20090.1| Os06g0643100 [Oryza sativa Japonica Group]
 gi|218198634|gb|EEC81061.1| hypothetical protein OsI_23870 [Oryza sativa Indica Group]
 gi|222635966|gb|EEE66098.1| hypothetical protein OsJ_22127 [Oryza sativa Japonica Group]
          Length = 204

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 43/84 (51%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +  SG   D + L + L  RH +YQ +  + M     A L+S  LY KRF PY+  
Sbjct: 47  DKLYIGLSGLATDAQTLYQRLVFRHKLYQLREERDMKPQTFASLVSALLYEKRFGPYFCQ 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYE 97
            V+ GL  + +  + T D +G+ E
Sbjct: 107 PVIAGLGEDNEPFICTMDCIGAKE 130


>gi|217075224|gb|ACJ85972.1| unknown [Medicago truncatula]
          Length = 204

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 44/84 (52%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +  SG   D + L + L  RH +YQ +    M     A L+S+  Y KRF PY+  
Sbjct: 47  DKLFIGLSGLATDSQTLYQRLVFRHKLYQLREECDMKPETFASLVSSMQYEKRFGPYFCQ 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYE 97
            V+ GL ++ K  + T DA+G+ E
Sbjct: 107 PVIAGLGDDDKPFICTMDAIGAKE 130


>gi|126458649|ref|YP_001054927.1| proteasome endopeptidase complex protein [Pyrobaculum calidifontis
           JCM 11548]
 gi|302595741|sp|A3MS44.1|PSB1_PYRCJ RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|126248370|gb|ABO07461.1| proteasome endopeptidase complex, beta component, Threonine
           peptidase, MEROPS family T01A [Pyrobaculum calidifontis
           JCM 11548]
          Length = 201

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 79/170 (46%), Gaps = 14/170 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D      SG  AD++++   L+ R   Y+ +H + +    +   +S  L+Y R + Y   
Sbjct: 40  DHVAATMSGGVADLQSVLSFLSLRAREYRVEHKRPIPIRALVNYVSLLLFYSRPYIYLVH 99

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           +++GG+D E    +Y  D +G+  +  Y + GSGS    P+    L+     +   +D  
Sbjct: 100 SIVGGVDAEEGPVLYMVDWLGTVTKEKYIATGSGS----PYAKGALE-----VAYRED-- 148

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKG-GIHREYMELRK 182
             L+  EAV+L      +A   D  +G+ +++V + K  G  R +   +K
Sbjct: 149 --LTIDEAVELAIRAVKAAIRNDPGSGEGIDVVTITKSDGFRRVFTTQQK 196


>gi|330508619|ref|YP_004385047.1| proteasome subunit beta [Methanosaeta concilii GP6]
 gi|328929427|gb|AEB69229.1| proteasome subunit beta [Methanosaeta concilii GP6]
          Length = 206

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 81/174 (46%), Gaps = 25/174 (14%)

Query: 1   MGSFFYILTSCRADKCV-------MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPG 53
           MGSF   + S +A K         M ++G   D ++L +++     +Y+ Q  + ++   
Sbjct: 29  MGSF---IASSQAKKIYQIDDLVGMTTAGGVGDAQSLVRMVQVEARLYKMQRGEGLTVKA 85

Query: 54  MAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGS-YERVGYSSQGSGSTLIM 112
           +  +L+N L  +R++P+    ++GG+D  G   +Y+ DA+G   E     + GSGS +  
Sbjct: 86  VTTMLANILSSRRYYPFMVQLIMGGVDRYGP-RIYSLDALGGQIEERRIVATGSGSPVAY 144

Query: 113 PFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIV 166
             L+   K       P       +S  +   L      +A +RD  +GDK+E+V
Sbjct: 145 GVLEAMYK-------PG------ISVEDGTVLAARAIHNALKRDSASGDKIELV 185


>gi|448530967|ref|ZP_21620801.1| 20S proteasome A and B subunits [Halorubrum hochstenium ATCC
           700873]
 gi|445707407|gb|ELZ59261.1| 20S proteasome A and B subunits [Halorubrum hochstenium ATCC
           700873]
          Length = 243

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 19/150 (12%)

Query: 27  VKALQKLLA---ARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEG 83
           V A Q L++   A   +Y+ +  K MS   ++ L  N L    F  Y    +LGG+D+EG
Sbjct: 98  VSAAQNLISTLRAETSLYEARRGKDMSMEALSTLTGNLLRSGAF--YIVQPILGGVDDEG 155

Query: 84  KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 143
              +Y+ DA+G      Y+  GSGS   +  L+ +            D VT + EA+ + 
Sbjct: 156 A-HIYSIDALGGTTEEEYTVTGSGSQYALGVLEQEY----------DDGVT-IDEAKTI- 202

Query: 144 LVKTCFASATERDIYTGDKLEIVVLNKGGI 173
                  SA ERD+ +G+ + + V+   G+
Sbjct: 203 -AAKAIQSAVERDLASGNGINVAVVTDDGV 231


>gi|448435232|ref|ZP_21586709.1| 20S proteasome A and B subunits [Halorubrum tebenquichense DSM
           14210]
 gi|445684056|gb|ELZ36442.1| 20S proteasome A and B subunits [Halorubrum tebenquichense DSM
           14210]
          Length = 243

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 19/150 (12%)

Query: 27  VKALQKLLA---ARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEG 83
           V A Q L++   A   +Y+ +  K MS   ++ L  N L    F  Y    +LGG+D+EG
Sbjct: 98  VSAAQNLISTLRAETSLYEARRGKDMSMEALSTLTGNLLRSGAF--YIVQPILGGVDDEG 155

Query: 84  KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 143
              +Y+ DA+G      Y+  GSGS   +  L+ +            D VT + EA+ + 
Sbjct: 156 A-HIYSIDALGGTTEEEYTVTGSGSQYALGVLEQEY----------DDGVT-IDEAKTI- 202

Query: 144 LVKTCFASATERDIYTGDKLEIVVLNKGGI 173
                  SA ERD+ +G+ + + V+   G+
Sbjct: 203 -AAKAIQSAVERDLASGNGINVAVVTDDGV 231


>gi|322697964|gb|EFY89738.1| 20S proteasome subunit [Metarhizium acridum CQMa 102]
          Length = 261

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 23/178 (12%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLI-------YQHQHNKQMSCPGMAQLLSNTLYYK 65
           AD  V+   GF  D+  +Q L   RHL        Y    + +++   + + LS  LY +
Sbjct: 78  ADASVV---GFSGDISDMQYL--DRHLTDLALTEAYDSPDSARLNASNLHRYLSKLLYRR 132

Query: 66  R--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPS 123
           R  F P ++  ++ GLD++G   +   D +G+       + G G+ L  P +        
Sbjct: 133 RSKFDPLWNHLLVAGLDDKGTPFLAAADLLGTTYSAPSLATGFGAMLAQPVMRR------ 186

Query: 124 PLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIH-REYMEL 180
               P +++   L+  EAVD++K C      RD  + D   + ++ K G+  RE  +L
Sbjct: 187 --YAPDEESAAKLTREEAVDIIKECMKVLFYRDARSLDSYSLAIVTKDGVELRENQKL 242


>gi|448488453|ref|ZP_21607289.1| 20S proteasome A and B subunits [Halorubrum californiensis DSM
           19288]
 gi|445696143|gb|ELZ48236.1| 20S proteasome A and B subunits [Halorubrum californiensis DSM
           19288]
          Length = 243

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 19/150 (12%)

Query: 27  VKALQKLLA---ARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEG 83
           V A Q L++   A   +Y+ +  K MS   ++ L  N L    F  Y    +LGG+D+EG
Sbjct: 98  VSAAQNLISTLRAETSLYEARRGKDMSMEALSTLTGNLLRSGAF--YIVQPILGGVDDEG 155

Query: 84  KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 143
              +Y+ DA+G      Y+  GSGS   +  L+ +            D VT     EA +
Sbjct: 156 A-HIYSIDALGGTTEEEYTVTGSGSQYALGVLEQEY----------DDDVTI---DEAKN 201

Query: 144 LVKTCFASATERDIYTGDKLEIVVLNKGGI 173
           +      SA ERD+ +G+ + + V+   G+
Sbjct: 202 IAAKAIQSAVERDLASGNGINVAVVTDDGV 231


>gi|391339684|ref|XP_003744177.1| PREDICTED: proteasome subunit beta type-3-like [Metaseiulus
           occidentalis]
          Length = 205

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 15/164 (9%)

Query: 22  GFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD- 80
           G   D   + + L     +Y+ Q N+QM+    A LLS TLY KRF PY+   V+ G+D 
Sbjct: 55  GLATDTITVSQKLRFDMNLYELQENRQMTPKTFATLLSGTLYEKRFGPYFIEPVVAGMDP 114

Query: 81  NEGKGCVYTYDAVGS-YERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEA 139
              +  V   D +GS  E V +   G+         +        L  P       +   
Sbjct: 115 KTNEPYVACMDLIGSTTETVDFVVSGTAE-------EEAYGMCETLWRPG------MKPD 161

Query: 140 EAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           E  + +  C  +A +RD  +G  +++ V+ K  +   Y++ R D
Sbjct: 162 ELFECISQCVLNAMDRDAISGWGVKVHVMEKDKVTTRYLKTRMD 205


>gi|374636366|ref|ZP_09707939.1| proteasome endopeptidase complex, beta subunit [Methanotorris
           formicicus Mc-S-70]
 gi|373559248|gb|EHP85553.1| proteasome endopeptidase complex, beta subunit [Methanotorris
           formicicus Mc-S-70]
          Length = 220

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 14/162 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   M  +G   D +AL + ++A   +Y+ +  K +     A L+SN L+  R FP+ + 
Sbjct: 49  DYIAMTIAGSVGDAQALVRYVSAEAKLYKMRTGKNIPPLSCATLMSNILHGSRMFPFLTQ 108

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGY-SSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            ++GG D      +++ D VG      Y ++ GSGS      L  +L+    +LL     
Sbjct: 109 LIIGGYDFLYGPRLFSLDPVGGLNEESYFTATGSGSPTAYGVL--ELEYSRDMLLK---- 162

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIH 174
                  + ++L      SA ERD ++G+ + +  +NK G+ 
Sbjct: 163 -------DGLNLSVKALMSAMERDAFSGNGISLAYVNKEGVK 197


>gi|115400898|ref|XP_001216037.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114189978|gb|EAU31678.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 260

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 77/164 (46%), Gaps = 11/164 (6%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQ-HNKQMSCPGMAQLLSNTLYYKR--FFP 69
           +D  ++  SG  +D++ + +LL +  +   +  H   ++   +   LS  LY +R  F P
Sbjct: 78  SDSAIVGFSGDVSDMQYIDRLLQSIDIRENYSSHGNMLNAKNLHTYLSKVLYKRRSEFNP 137

Query: 70  YYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA 129
            ++  ++ G D + K  + + D +G+     + + G G+ L +P L          L P 
Sbjct: 138 LWNHLLVVGFDGDKKPFLSSADLLGTTYSAPHLATGFGAHLAIPILRR--------LFPE 189

Query: 130 QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
           +  V  +++ EAV  ++ C      RD  + DK  + ++ +GGI
Sbjct: 190 ERPVEQITKEEAVAALRECLKVLWYRDARSLDKYSLAIITEGGI 233


>gi|444323175|ref|XP_004182228.1| hypothetical protein TBLA_0I00480 [Tetrapisispora blattae CBS 6284]
 gi|387515275|emb|CCH62709.1| hypothetical protein TBLA_0I00480 [Tetrapisispora blattae CBS 6284]
          Length = 205

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 80/165 (48%), Gaps = 15/165 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G   DV  L +L   +  +Y+ + N+ +       L+S+TLY KRF PY+   V+ GL+
Sbjct: 54  TGLATDVTTLNELFRYKTNMYKLKENRSIEPETFTNLVSSTLYSKRFGPYFVGPVVAGLN 113

Query: 81  NE-GKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSE 138
           ++ GK  +  +D +G  +    +   G+ S  +    ++ L  P+   L ++D    +S+
Sbjct: 114 SKTGKPYIAGFDLIGCIDEAKDFIVSGTASDQLFGMCES-LYEPN---LESEDLFETISQ 169

Query: 139 AEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           A           +A +RD  +G    + ++ K  + + Y++ R+D
Sbjct: 170 A---------LLNAVDRDALSGWGAVVYIIKKDKVIKRYLKTRQD 205


>gi|134045918|ref|YP_001097404.1| proteasome subunit beta [Methanococcus maripaludis C5]
 gi|302595749|sp|A4FYA5.1|PSB_METM5 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|132663543|gb|ABO35189.1| proteasome endopeptidase complex, beta component, Threonine
           peptidase, MEROPS family T01A [Methanococcus maripaludis
           C5]
          Length = 219

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   M  +G   D ++L ++++A   I++ +    M+      L+SN L+  R +P  + 
Sbjct: 53  DYIAMTIAGSVGDAQSLIRIISAEAKIHKMRTGNNMTPLSCTTLISNVLHGNRHYPLLTQ 112

Query: 74  NVLGGLDNEGKGCVYTYDAVGSY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            +LGG D      +++ D VG   E   +++ GSGS      L+ + +S   +      A
Sbjct: 113 LILGGYDLINGAKLFSLDPVGGINEESSFTATGSGSPTAYGVLEAEYRSDVTIDKGLLVA 172

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
           V  LS             SA +RD Y+G+ + +  +NK G+
Sbjct: 173 VKALS-------------SAMQRDAYSGNGISLAHINKDGV 200


>gi|242096488|ref|XP_002438734.1| hypothetical protein SORBIDRAFT_10g025190 [Sorghum bicolor]
 gi|241916957|gb|EER90101.1| hypothetical protein SORBIDRAFT_10g025190 [Sorghum bicolor]
          Length = 204

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 43/84 (51%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +  SG   D + L + L  RH +YQ +  + M     A L+S  LY KRF PY+  
Sbjct: 47  DKLYIGLSGLATDAQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQ 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYE 97
            V+ GL ++    + T D +G+ E
Sbjct: 107 PVIAGLGDDDVPFICTMDCIGAKE 130


>gi|320101460|ref|YP_004177052.1| proteasome endopeptidase complex subunit beta [Desulfurococcus
           mucosus DSM 2162]
 gi|319753812|gb|ADV65570.1| proteasome endopeptidase complex, beta component [Desulfurococcus
           mucosus DSM 2162]
          Length = 208

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 78/172 (45%), Gaps = 19/172 (11%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLI--YQHQHNKQMSCPGMAQLLSNTL-YYKRFFPY 70
           D   +  SG  AD + + +   AR L   Y+ +  K +S   +A  +S  L  Y R+ P+
Sbjct: 46  DYAALTISGLVADAQYIVEY--ARFLARDYEAETGKPISVGALASRISLVLSVYLRYVPF 103

Query: 71  YSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQ 130
               +LGG D+ G   +Y  D  GS  R  Y + GSGS +    L+   +S         
Sbjct: 104 IVQLLLGGRDHTG-ASLYYMDLYGSVTREKYMATGSGSPVAFGVLEQGYRSD-------- 154

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRK 182
                LS  EA  L     +SA  RD +TG+ +++VV+   G   E + L++
Sbjct: 155 -----LSLEEAKALAFKAVSSAIMRDGFTGEGVDVVVIGPQGYMEETIPLKR 201


>gi|333910183|ref|YP_004483916.1| proteasome subunit beta [Methanotorris igneus Kol 5]
 gi|333750772|gb|AEF95851.1| proteasome endopeptidase complex, beta subunit [Methanotorris
           igneus Kol 5]
          Length = 216

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 75/161 (46%), Gaps = 14/161 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   M  +G   D +AL + ++A   +Y+ +  K +     A L+SN L+  R FP+ + 
Sbjct: 49  DYIAMTIAGSVGDAQALVRYVSAEAKLYKMRTGKNIPPLSCATLISNILHGNRMFPFLTQ 108

Query: 74  NVLGGLDNEGKGCVYTYDAVGSY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            ++GG D      +++ D +G   E   +++ GSG             SP+   +   + 
Sbjct: 109 LIIGGYDLLYGPRLFSLDPIGGLNEESSFTATGSG-------------SPTAYGILELEY 155

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
              ++  + ++L      SA ERD ++G+ + +  +NK G+
Sbjct: 156 SKDMTLKDGLNLAIKALISAMERDAFSGNGISLAYVNKEGV 196


>gi|213407092|ref|XP_002174317.1| proteasome component PRE3 [Schizosaccharomyces japonicus yFS275]
 gi|212002364|gb|EEB08024.1| proteasome component PRE3 [Schizosaccharomyces japonicus yFS275]
          Length = 229

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 69/168 (41%), Gaps = 14/168 (8%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           ++K     SG  AD +A+  +L      Y+ Q+  + +    A L S   Y  + +    
Sbjct: 62  SEKIWCCRSGSAADTQAVADILKYYLSQYRMQYGVEPTVQTAASLASEMCYQNKDYLTAG 121

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
             ++ G D E  G VY+    GS  R   +  GSGS  I  F D   K            
Sbjct: 122 L-IIAGYDEETGGEVYSIPLGGSVHRQPLAIGGSGSAFIYGFCDANFKEN---------- 170

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMEL 180
              + +  A+  +K     A ERD  +G  + +V+L K GI R++  L
Sbjct: 171 ---MDKETAIQFLKNAVGLAMERDRSSGGTIRMVILTKSGIERKFFAL 215


>gi|342876162|gb|EGU77820.1| hypothetical protein FOXB_11684 [Fusarium oxysporum Fo5176]
          Length = 261

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 19/162 (11%)

Query: 22  GFQADVKALQKLLAARHLI-------YQHQHNKQMSCPGMAQLLSNTLYYKR--FFPYYS 72
           GF  D+  +Q L   RHLI       Y      +++   + + L+  LY +R  F P ++
Sbjct: 84  GFSGDISDMQYL--DRHLIDLSLDEAYTSPDAPRLNAANLHRYLAKLLYRRRSKFDPLWN 141

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
             ++ GLD++ K  +   D +GS       + G GS L  P +   +        P ++A
Sbjct: 142 HLLVAGLDDDDKPFLAAADLLGSTYSAPSLATGFGSMLAQPIMRRHV--------PDEEA 193

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIH 174
              L + EA+ ++K C      RD  + D   + V+ K G+ 
Sbjct: 194 AQNLEKEEAIKIIKECMKVLYYRDARSLDSYSMAVVTKEGVE 235


>gi|196003382|ref|XP_002111558.1| hypothetical protein TRIADDRAFT_55706 [Trichoplax adhaerens]
 gi|190585457|gb|EDV25525.1| hypothetical protein TRIADDRAFT_55706 [Trichoplax adhaerens]
          Length = 276

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 14/152 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G  AD    +++LA R  +Y+ ++ +++S    ++LL+N +YY +        ++ G D
Sbjct: 119 AGGAADCSFWERVLAERCRVYELRNKERISVAAASKLLANMVYYYKGMGLSMGTMICGWD 178

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
             G G  Y  D+ G+       S GSGST     LD+  K               L + E
Sbjct: 179 KRGPGLYYV-DSDGTRMTNYMFSVGSGSTYAYGILDSGFKH-------------DLEDEE 224

Query: 141 AVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
           A DL +     AT RD Y+G  + +  + + G
Sbjct: 225 AYDLARRAIFHATHRDAYSGGSVNLYHVKETG 256


>gi|407463311|ref|YP_006774628.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
           koreensis AR1]
 gi|407046933|gb|AFS81686.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
           koreensis AR1]
          Length = 210

 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 14/159 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   +  +G  AD + +  +L     +++ + +  +S   +A+L S   +  R +P+ + 
Sbjct: 51  DHAGLTLAGGVADAQNIVDILRYHSNLHRVEKHGPISIHSLARLCSLIFHQNRGYPFMAD 110

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++GG D EG   ++  D  GS E+  Y + GSGS +    L+ + K             
Sbjct: 111 ILVGGYDTEGP-ALFNIDMFGSVEKKSYVTTGSGSPVAYGLLEEEYKE------------ 157

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
             L+  EA  +      +A  R+I TGD + I V++K G
Sbjct: 158 -DLTVEEAKKIALRAVKAAIVRNIGTGDGINIAVMDKDG 195


>gi|356515898|ref|XP_003526634.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta
           type-3-A-like [Glycine max]
          Length = 204

 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 14/171 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +   G   D + L + L   H +YQ +  + M     A L+S  LY  RF PY+  
Sbjct: 47  DKLFIGLXGLATDAQTLYQRLLFGHKLYQLREERDMKPQTFASLVSAILYENRFGPYFCQ 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            V+ GL ++ K  + T DA+G+ E    ++  G+ S  +    ++  K   P + P    
Sbjct: 107 PVIAGLGDDDKPFICTMDAIGAKELAKDFAVAGTASESLYGACESMFK---PDMEP---- 159

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                  E  +++     S+ +RD  +G    I V+    +    ++ R D
Sbjct: 160 ------EELFEMISQALLSSVDRDCLSGWGGHIYVVTPTEVKERILKGRMD 204


>gi|322705602|gb|EFY97186.1| 20S proteasome subunit [Metarhizium anisopliae ARSEF 23]
          Length = 261

 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 22/171 (12%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLI-------YQHQHNKQMSCPGMAQLLSNTLYYK 65
           AD  V+   GF  D+  +Q L   RHL        Y    + +++   + + LS  LY +
Sbjct: 78  ADASVV---GFSGDISDMQYL--DRHLTDLALTEAYDSPDSARLNASNLHRYLSKLLYRR 132

Query: 66  R--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPS 123
           R  F P ++  ++ GLD++G   +   D +G+       + G G+ L  P +        
Sbjct: 133 RSKFDPLWNHLLVAGLDDKGAPFLAAADLLGTTYSAPSLATGFGAMLAQPVMRR------ 186

Query: 124 PLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIH 174
               P +++   L+  EAVD++K C      RD  + D   + ++ K G+ 
Sbjct: 187 --YAPDEESAAKLTREEAVDIIKECMKVLFYRDARSLDSYSLAIVTKDGVE 235


>gi|357475641|ref|XP_003608106.1| Proteasome subunit beta type [Medicago truncatula]
 gi|355509161|gb|AES90303.1| Proteasome subunit beta type [Medicago truncatula]
 gi|388497742|gb|AFK36937.1| unknown [Medicago truncatula]
          Length = 204

 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 43/84 (51%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +  SG   D + L + L  RH +YQ +    M     A L+S   Y KRF PY+  
Sbjct: 47  DKLYIGLSGLATDSQTLYQRLVFRHKLYQLREELDMKPETFASLVSAMQYEKRFGPYFCQ 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYE 97
            V+ GL ++ K  + T DA+G+ E
Sbjct: 107 PVIAGLGDDDKPFICTMDAIGAKE 130


>gi|222479043|ref|YP_002565280.1| 20S proteasome A and B subunits [Halorubrum lacusprofundi ATCC
           49239]
 gi|302595813|sp|B9LTS6.1|PSB_HALLT RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|222451945|gb|ACM56210.1| 20S proteasome A and B subunits [Halorubrum lacusprofundi ATCC
           49239]
          Length = 243

 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 67/150 (44%), Gaps = 19/150 (12%)

Query: 27  VKALQKL---LAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEG 83
           V A Q L   L A   +Y+ +  K MS   ++ L  N L    F  Y    +LGG+D+EG
Sbjct: 98  VSAAQNLISTLKAETSLYETRRGKDMSMEALSTLTGNLLRSGAF--YIVQPILGGVDDEG 155

Query: 84  KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 143
              +Y+ DA+G      Y+  GSGS   +  L+ +            D VT     EA  
Sbjct: 156 S-HIYSIDALGGTTEEEYTVTGSGSQYALGVLEQEY----------DDDVTV---DEAKT 201

Query: 144 LVKTCFASATERDIYTGDKLEIVVLNKGGI 173
           +      SA ERD+ +G+ + + V+   G+
Sbjct: 202 MAAKAIQSAVERDLASGNGINVAVVTDDGV 231


>gi|413935900|gb|AFW70451.1| proteasome subunit beta type [Zea mays]
          Length = 305

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 42/84 (50%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +  SG   D + L + L  RH +YQ    + M     A L+S  LY KRF PY+  
Sbjct: 148 DKLYIGLSGLATDAQTLYQRLVFRHKLYQLMEERDMKPETFASLVSALLYEKRFGPYFCQ 207

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYE 97
            V+ GL +  +  + T D +G+ E
Sbjct: 208 PVIAGLGDNDEPFICTMDCIGAKE 231


>gi|389847077|ref|YP_006349316.1| proteasome beta subunit [Haloferax mediterranei ATCC 33500]
 gi|448614975|ref|ZP_21664003.1| proteasome beta subunit [Haloferax mediterranei ATCC 33500]
 gi|388244383|gb|AFK19329.1| proteasome beta subunit [Haloferax mediterranei ATCC 33500]
 gi|445753062|gb|EMA04481.1| proteasome beta subunit [Haloferax mediterranei ATCC 33500]
          Length = 245

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 19/150 (12%)

Query: 27  VKALQKLLA---ARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEG 83
           V A Q L++   A   +Y+ +  + MS   ++ L+ N L    F  Y    +LGG+D+EG
Sbjct: 98  VSAAQSLISSLRAEVRLYESRRGEDMSMQALSTLVGNFLRSGGF--YIVQPILGGVDDEG 155

Query: 84  KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 143
              +Y+ D  GS     Y+  GSGS   +  L+ +                 LS  EA +
Sbjct: 156 -AHIYSIDPAGSILEEEYTVTGSGSQYALGVLEQEFSE-------------DLSIDEARE 201

Query: 144 LVKTCFASATERDIYTGDKLEIVVLNKGGI 173
           +      SA ERD+ +G+ + I V+ + G+
Sbjct: 202 VATKAIRSAVERDLASGNGINIAVVTEDGV 231


>gi|17541700|ref|NP_500125.1| Protein PBS-1 [Caenorhabditis elegans]
 gi|351064427|emb|CCD72799.1| Protein PBS-1 [Caenorhabditis elegans]
          Length = 239

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 72/164 (43%), Gaps = 16/164 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D  V+  SG  AD +A+  +      +Y    NK ++    +Q+    LY  R     S 
Sbjct: 62  DNMVVCRSGSAADTQAIADIAKYHIDVYTMTENKPVTIYRSSQIFRQFLYNYR--EQLSA 119

Query: 74  NVL-GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           +VL  G D E  G VY     G   R   ++ GSGST +  FLD+Q +   P L      
Sbjct: 120 SVLVAGWDEELGGQVYAIPIGGFVSRQRSTASGSGSTFVQGFLDSQWR---PNLT----- 171

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHRE 176
              L E +A+  VK     AT RD  +G  + + V+NK G   E
Sbjct: 172 ---LEECKAI--VKQAVGLATFRDGSSGGVVRLAVINKAGSQFE 210


>gi|146304800|ref|YP_001192116.1| proteasome endopeptidase complex protein [Metallosphaera sedula DSM
           5348]
 gi|302595852|sp|A4YIE0.1|PSB1_METS5 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|145703050|gb|ABP96192.1| proteasome endopeptidase complex, beta component, Threonine
           peptidase, MEROPS family T01A [Metallosphaera sedula DSM
           5348]
          Length = 217

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 79/172 (45%), Gaps = 18/172 (10%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+  M ++G  AD++ +   +   +       N+ ++   +A  L+N L   ++FPY   
Sbjct: 60  DRIGMTTAGSVADLQFIYNYMKNIYHYNLISGNRPVTVKSLATYLTNILSQNKYFPYLVQ 119

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++GG D + +  ++  D +G      Y + GSGS + M  L              +D  
Sbjct: 120 ILMGGYDTQPR--LFNLDYLGDMTEETYVATGSGSPVAMGVL--------------EDGY 163

Query: 134 TP-LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG-IHREYMELRKD 183
           +P L+  +A+DL      SA +RD +TG  + +  + K G + RE    RK+
Sbjct: 164 SPDLTGDQAMDLAARAVMSAIKRDSFTGTGVIVTKITKEGHVEREIYPNRKE 215


>gi|448107066|ref|XP_004200900.1| Piso0_003510 [Millerozyma farinosa CBS 7064]
 gi|448110074|ref|XP_004201531.1| Piso0_003510 [Millerozyma farinosa CBS 7064]
 gi|359382322|emb|CCE81159.1| Piso0_003510 [Millerozyma farinosa CBS 7064]
 gi|359383087|emb|CCE80394.1| Piso0_003510 [Millerozyma farinosa CBS 7064]
          Length = 206

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 78/172 (45%), Gaps = 13/172 (7%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            DK  +  +G   DV  L ++   +H +Y+ +  + +    +A L+S+TLY KRF PY+ 
Sbjct: 47  GDKTFLGLTGLATDVITLSEVFRFKHNLYKLREERDIEPKTLANLVSSTLYEKRFGPYFV 106

Query: 73  FNVLGGLDNEGK-GCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
             ++ GLD +     +  +D++G  +       G  ++  +  L   L  PS   L  +D
Sbjct: 107 SPLVAGLDPKSNVPFICGFDSIGCIDFAKDFIVGGTASDQLYGLCESLYEPS---LEPED 163

Query: 132 AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
               +S+            +A +RD  +G    + ++ K  I R  ++ R+D
Sbjct: 164 LFETISQV---------LLNAVDRDALSGWGAVVYIVTKDKIIRRVLKTRQD 206


>gi|226504734|ref|NP_001140276.1| uncharacterized protein LOC100272320 [Zea mays]
 gi|194698808|gb|ACF83488.1| unknown [Zea mays]
          Length = 204

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 42/84 (50%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +  SG   D + L + L  RH +YQ    + M     A L+S  LY KRF PY+  
Sbjct: 47  DKLYIGLSGLATDAQTLYQRLVFRHKLYQLMEERDMKPETFASLVSALLYEKRFGPYFCQ 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYE 97
            V+ GL +  +  + T D +G+ E
Sbjct: 107 PVIAGLGDNDEPFICTMDCIGAKE 130


>gi|413943569|gb|AFW76218.1| hypothetical protein ZEAMMB73_756098 [Zea mays]
          Length = 204

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 43/84 (51%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +  SG   D + L + L  RH +YQ +  + M     A L+S  LY KRF PY+  
Sbjct: 47  DKLYIGLSGLATDAQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQ 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYE 97
            V+ GL ++    + T D +G+ E
Sbjct: 107 PVIAGLGDDNVPFICTMDCLGAKE 130


>gi|226505280|ref|NP_001141963.1| uncharacterized protein LOC100274112 [Zea mays]
 gi|194706600|gb|ACF87384.1| unknown [Zea mays]
          Length = 204

 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 43/84 (51%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +  SG   D + L + L  RH +YQ +  + M     A L+S  LY KRF PY+  
Sbjct: 47  DKLYIGLSGLATDAQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQ 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYE 97
            V+ GL ++    + T D +G+ E
Sbjct: 107 PVIAGLGDDNVPFICTMDCLGAKE 130


>gi|229582084|ref|YP_002840483.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
 gi|302595759|sp|C3NHF1.1|PSB2_SULIN RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|228012800|gb|ACP48561.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
          Length = 211

 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 22/166 (13%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQ---MSCPGMAQLLSNTLYYKRFFPY 70
           DK  + ++G  AD++ +  +L     IY + +  +   +S  G+A  L+N L   ++FPY
Sbjct: 56  DKIGITTAGSVADLQFIYDVLKN---IYHYNNITKYGPISIKGIATRLANVLSATKYFPY 112

Query: 71  YSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQ 130
               ++GG D++ +  ++  D +G      Y + GSGS + M  L+++      L     
Sbjct: 113 IVQILIGGYDDQPR--LFNLDYLGDITEENYVATGSGSPVAMGVLEDEYNPKMTL----- 165

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHRE 176
                    EA DL K    SA +RD +TG  + +  ++  G H E
Sbjct: 166 --------DEAADLAKRAVFSAIKRDSFTGTGVIVAKIHSKG-HEE 202


>gi|413954658|gb|AFW87307.1| proteasome subunit beta type [Zea mays]
          Length = 204

 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 43/84 (51%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +  SG   D + L + L  RH +YQ +  + M     A L+S  LY KRF PY+  
Sbjct: 47  DKLYIGLSGLATDAQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQ 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYE 97
            V+ GL ++    + T D +G+ E
Sbjct: 107 PVIAGLGDDNVPFICTMDCLGAKE 130


>gi|19113087|ref|NP_596295.1| 20S proteasome component beta 1 Pre3 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|17380244|sp|O43063.1|PSB1_SCHPO RecName: Full=Probable proteasome subunit beta type-1; Flags:
           Precursor
 gi|2832891|emb|CAA16832.1| 20S proteasome component beta 1 Pre3 (predicted)
           [Schizosaccharomyces pombe]
          Length = 226

 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 14/160 (8%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           SG  AD + +  LL     +Y+ Q     S    A L S   Y  +        ++ G D
Sbjct: 70  SGSAADTQTVADLLKYYLSMYRIQFGHDPSVHTAATLASEMCYQNKNMLSAGL-IVAGYD 128

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
            +  G VY+    GS  +   +  GSGS  I  F D   +               +++ E
Sbjct: 129 EKTGGDVYSIPLGGSLHKQPLAIGGSGSAFIYGFCDANFREN-------------MTQEE 175

Query: 141 AVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMEL 180
           AV+ +K   A A ERD  +G  + +V+LNK G+ R++  +
Sbjct: 176 AVEFLKNAVALAMERDGSSGGTIRMVILNKDGMERKFFAI 215


>gi|241742039|ref|XP_002414154.1| proteasome, subunit beta, putative [Ixodes scapularis]
 gi|215508008|gb|EEC17462.1| proteasome, subunit beta, putative [Ixodes scapularis]
          Length = 80

 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 1/52 (1%)

Query: 132 AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           AV P  E  A+ ++K  F SA ERDIYTGD + + +++K G+H E   LR+D
Sbjct: 30  AVPPTRE-RAISIIKDVFISAAERDIYTGDSVIVNIIDKDGVHEERFPLRRD 80


>gi|396457900|ref|XP_003833563.1| similar to proteasome subunit beta type-4 [Leptosphaeria maculans
           JN3]
 gi|312210111|emb|CBX90198.1| similar to proteasome subunit beta type-4 [Leptosphaeria maculans
           JN3]
          Length = 276

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 79/163 (48%), Gaps = 11/163 (6%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNK-QMSCPGMAQLLSNTLYYKR--FFPY 70
           D+ V+   G  +D++ L +LL +  +   +  ++ Q++   +   L+  +Y +R  F P 
Sbjct: 95  DEVVVGFGGDVSDMQYLDRLLNSLDIRENYSSSESQLNAKNLHTYLAKVMYNRRSKFDPL 154

Query: 71  YSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQ 130
           ++  ++ G+D E K  + + D +G+       + G G+ L  P L          +LP +
Sbjct: 155 WNHLLIVGMDGESKPFLASADLLGTTFSSPSLATGFGAHLAQPILRT--------ILPDE 206

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
            AV  +++ +AV+ +K C      RD  + DK  I V+ K G+
Sbjct: 207 AAVAKVTKEQAVEKIKECMKVLFYRDARSMDKYSIAVVTKEGV 249


>gi|116780859|gb|ABK21850.1| unknown [Picea sitchensis]
          Length = 233

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 26/170 (15%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   +  SG  AD + +   +  R+ +  HQH  Q+  P   ++ +N +   R   Y + 
Sbjct: 52  DNVYLCRSGSAADSQVVSDYV--RYFL--HQHIIQLGQPATVKVTANLI---RLLSYNNK 104

Query: 74  NVL------GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLL 127
           N L      GG D    G +Y+    G+  ++ ++  GSGS+ +  FLD   K       
Sbjct: 105 NTLETGLIVGGWDKYEGGSIYSVPLGGTMLQLPFAIGGSGSSYLYGFLDQAWKD------ 158

Query: 128 PAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREY 177
                   +S+ EA  LV  C + A  RD  +G  +  VV+N  G+ R +
Sbjct: 159 -------GMSKEEAEALVVKCVSLAIARDGASGGVVRTVVINSEGVTRNF 201


>gi|448727796|ref|ZP_21710145.1| proteasome beta subunit [Halococcus morrhuae DSM 1307]
 gi|445789782|gb|EMA40461.1| proteasome beta subunit [Halococcus morrhuae DSM 1307]
          Length = 228

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 16/162 (9%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           +  +  SG  +  +AL   L A   +Y+ +  ++MS   ++ L SN L    F  Y    
Sbjct: 74  RGALTISGAVSAAQALISNLQAEVDLYEARRGEEMSMQALSTLTSNFLRSGAF--YIVQP 131

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 134
           +LGG+D+EG   +Y+ D  GS     Y + GSGS      L+ Q +              
Sbjct: 132 ILGGVDDEG-AHIYSIDPAGSVMEEEYDATGSGSPFAYGVLEQQYED------------- 177

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHRE 176
            LS  EA  +      SA ERD  +G+ + I  + + G+  E
Sbjct: 178 GLSNDEARTVAARAVKSAVERDTASGNGIIISEITEDGVEIE 219


>gi|294889351|ref|XP_002772769.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
           50983]
 gi|239877319|gb|EER04585.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
           50983]
          Length = 129

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 42/70 (60%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           +C++   G   D + L +LL  R  +Y+ + +++M C  ++ L++  LY KRF PY+   
Sbjct: 46  RCLVGFQGLATDSQTLSQLLKFRLKLYKLKEDREMPCDVVSHLMATMLYEKRFGPYFCEP 105

Query: 75  VLGGLDNEGK 84
           V+ GL N+G+
Sbjct: 106 VIAGLKNDGE 115


>gi|169235741|ref|YP_001688941.1| proteasome beta subunit [Halobacterium salinarum R1]
 gi|302595858|sp|B0R4C8.1|PSB_HALS3 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|302595910|sp|Q9HR36.2|PSB_HALSA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|167726807|emb|CAP13593.1| proteasome beta subunit [Halobacterium salinarum R1]
          Length = 243

 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 20/170 (11%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
              ++ SG     ++  + L A   +Y+ +  + MS   ++ + SN L    FF      
Sbjct: 89  NAALSISGSVGGAQSFIRSLRAEANLYEARRGEYMSIDALSTMASNLLRGGPFFRVVP-- 146

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 134
           +LGG+D++G G V++ D  GS     Y++QGSG    MP+          L +  Q+   
Sbjct: 147 ILGGVDDDG-GHVFSLDPAGSSMSDTYTAQGSG----MPYA---------LGVLEQEYSE 192

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI----HREYMEL 180
            L+ A+A  +      SA+ERD  +G+ + I  +   G+    H+E+  L
Sbjct: 193 DLTMADAEQVAAHAVKSASERDTASGNGIHITKITHDGLTTVGHKEFDAL 242


>gi|15790018|ref|NP_279842.1| proteasome subunit alpha [Halobacterium sp. NRC-1]
 gi|10580444|gb|AAG19322.1| proteasome, subunit alpha [Halobacterium sp. NRC-1]
          Length = 255

 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 20/170 (11%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
              ++ SG     ++  + L A   +Y+ +  + MS   ++ + SN L    FF      
Sbjct: 101 NAALSISGSVGGAQSFIRSLRAEANLYEARRGEYMSIDALSTMASNLLRGGPFFRVVP-- 158

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 134
           +LGG+D++G G V++ D  GS     Y++QGSG    MP+    L+         Q+   
Sbjct: 159 ILGGVDDDG-GHVFSLDPAGSSMSDTYTAQGSG----MPYALGVLE---------QEYSE 204

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI----HREYMEL 180
            L+ A+A  +      SA+ERD  +G+ + I  +   G+    H+E+  L
Sbjct: 205 DLTMADAEQVAAHAVKSASERDTASGNGIHITKITHDGLTTVGHKEFDAL 254


>gi|118376326|ref|XP_001021345.1| Proteasome A-type and B-type family protein [Tetrahymena
           thermophila]
 gi|89303112|gb|EAS01100.1| Proteasome A-type and B-type family protein [Tetrahymena
           thermophila SB210]
          Length = 209

 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 18/174 (10%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D  ++  +G   DV+   +L+  +  +Y+ + NK M       L+S TLY KR+ PY+  
Sbjct: 48  DNILLGLTGLATDVQTFHRLIQYKVNLYRLRENKDMKVNTFVNLISATLYEKRWGPYFVS 107

Query: 74  NVLGGLD-NEGKGCV---YTYDAVGSYERVG-YSSQGSGSTLIMPFLDNQLKSPSPLLLP 128
            ++ GL+ +E KG +    TYD++G     G +   G+G+       D  + S       
Sbjct: 108 PIVAGLEYDEVKGVIPITATYDSIGCTSIEGEFQVGGTGA-------DGLIGSCESFWRK 160

Query: 129 AQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRK 182
                  L   E  D+V    ++  +RDI +G    +  L K  +  + ++ ++
Sbjct: 161 G------LKPDELEDIVAQSLSAGCDRDILSGWGGVVYTLTKDNLSVKVLKTKQ 208


>gi|145514570|ref|XP_001443190.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124410568|emb|CAK75793.1| unnamed protein product [Paramecium tetraurelia]
          Length = 204

 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 1/81 (1%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D  ++A SG  +D+     L+     +Y  + N++M     A L++++LY +RF P++  
Sbjct: 48  DNILLALSGLNSDIHTFYALMEKEINLYNLKENRKMKPSTFANLVASSLYERRFGPFFVT 107

Query: 74  NVLGGLDNEGKGCVYTYDAVG 94
            ++ GL+N GK  + TYD++G
Sbjct: 108 PIVAGLEN-GKPILATYDSIG 127


>gi|124505797|ref|XP_001351012.1| beta3 proteasome subunit, putative [Plasmodium falciparum 3D7]
 gi|23510655|emb|CAD49040.1| beta3 proteasome subunit, putative [Plasmodium falciparum 3D7]
          Length = 204

 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 12/169 (7%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGG-- 78
           SG   D++ L ++L  R  +Y+ + + +M     A +LS+ LY  RF PY+   ++ G  
Sbjct: 42  SGLATDIQTLYEILRYRVNLYEVRQDAEMDVECFANMLSSILYSNRFSPYFVNPIVVGFK 101

Query: 79  ----LDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 134
               +D EG+  V     + +Y+ +G   +         F+ N + S     +     V 
Sbjct: 102 LKHYVDEEGEKKVNYEPYLTAYDLIGAKCETR------DFVVNGVTSEQLFGMCESLYVK 155

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              E    + +  C  SA +RD  +G   E++VL    I ++ ++ R D
Sbjct: 156 DQDENGLFETISQCLLSALDRDCISGWGAEVLVLTPEKIIKKKLKARMD 204


>gi|169769577|ref|XP_001819258.1| proteasome subunit beta type-4 [Aspergillus oryzae RIB40]
 gi|83767117|dbj|BAE57256.1| unnamed protein product [Aspergillus oryzae RIB40]
 gi|391863541|gb|EIT72849.1| 20S proteasome, regulatory subunit beta type PSMB4/PRE4
           [Aspergillus oryzae 3.042]
          Length = 260

 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 16/173 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQ-HNKQMSCPGMAQLLSNTLYYKR--FFPY 70
           D  V+  SG  +D++ + +LL +  +   +  H   M+   +   LS  LY +R  F P 
Sbjct: 79  DSAVVGFSGDVSDMQYIDRLLESLDIRENYSTHGNMMNAKNLHTYLSKVLYKRRSEFNPL 138

Query: 71  YSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQ 130
           ++  ++ G D + K  + + D +G+     + + G G+ L +P L          L P +
Sbjct: 139 WNHILVAGFDEDKKPFLSSADLLGTTYSAPHLATGFGAHLAIPILRR--------LFPEE 190

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             +  +S+ EA   ++ C      RD  + DK  I V+   G+     E+++D
Sbjct: 191 KPLEEISKGEAEAALRECLKVLWYRDARSLDKYSIAVITAEGV-----EIKED 238


>gi|70944654|ref|XP_742236.1| beta3 proteasome subunit [Plasmodium chabaudi chabaudi]
 gi|56521097|emb|CAH75996.1| beta3 proteasome subunit, putative [Plasmodium chabaudi chabaudi]
          Length = 204

 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 74/176 (42%), Gaps = 12/176 (6%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYY-- 71
           D   +  SG   D+++L +LL  R  +YQ +   +M+    + +LSN LY  RF PY+  
Sbjct: 35  DHIYVGLSGLATDIQSLYELLRYRVNLYQIRQETEMNIDCFSNMLSNILYSNRFSPYFVN 94

Query: 72  ----SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLL 127
                F V   +D  G         + +Y+ +G   + +       F+ N + +     +
Sbjct: 95  PIVVGFKVTTQVDENGNKTNVYEPYLNAYDLIGAKCETN------DFVVNGVSNEQLYGM 148

Query: 128 PAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                +    E    + V  C  SA +RD  +G   E+ VL    I ++ ++ R D
Sbjct: 149 CESMYIKDQDENGLFETVSQCLLSALDRDCLSGWGAEVYVLTPDKIIKKKLKARMD 204


>gi|409723248|ref|ZP_11270548.1| proteasome beta subunit [Halococcus hamelinensis 100A6]
          Length = 237

 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 80/185 (43%), Gaps = 27/185 (14%)

Query: 7   ILTSCRADKCV-------MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLS 59
           ++ S RA+K         +  SG  +  +AL   L A   +Y+ +  ++MS   +A L S
Sbjct: 68  LVASKRAEKIAEIHPRGALTISGAVSAAQALINNLQAEVRLYEARRGEEMSIKALATLTS 127

Query: 60  NTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQL 119
           N L    F  Y    +LGG+D++G   +Y+    GS     Y++ GSGS      L+ Q 
Sbjct: 128 NFLRSGAF--YIVQPILGGVDDDGH-HIYSIGPGGSVMEEPYNATGSGSPFAYGVLEQQF 184

Query: 120 KSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG----IHR 175
           +               LS  EA  +      SA ERD  +G+ + I  +   G    +H 
Sbjct: 185 EE-------------GLSNEEAKTVATDAVKSAVERDTASGNGIIISEITDAGVDIEVHD 231

Query: 176 EYMEL 180
           ++ EL
Sbjct: 232 DFDEL 236


>gi|385773318|ref|YP_005645884.1| proteasome endopeptidase complex protein [Sulfolobus islandicus
           HVE10/4]
 gi|385775950|ref|YP_005648518.1| Proteasome endopeptidase complex [Sulfolobus islandicus REY15A]
 gi|323474698|gb|ADX85304.1| Proteasome endopeptidase complex [Sulfolobus islandicus REY15A]
 gi|323477432|gb|ADX82670.1| proteasome endopeptidase complex [Sulfolobus islandicus HVE10/4]
          Length = 211

 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 22/166 (13%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQ---MSCPGMAQLLSNTLYYKRFFPY 70
           DK  + ++G  AD++ +  +L     IY +    +   +S  G+A  L+N L   ++FPY
Sbjct: 56  DKIGITTAGSVADLQFIYNVLKN---IYHYNSITKYGPISIKGIATRLANVLSATKYFPY 112

Query: 71  YSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQ 130
               ++GG D++ +  ++  D +G      Y + GSGS + M  L+++      L     
Sbjct: 113 IVQILIGGYDDQPR--LFNLDYLGDITEENYVATGSGSPVAMGVLEDEYNPKMTL----- 165

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHRE 176
                    EA DL K    SA +RD +TG  + +  ++  G H E
Sbjct: 166 --------DEAADLAKRAVFSAIKRDSFTGTGVIVAKIHSKG-HEE 202


>gi|169601776|ref|XP_001794310.1| hypothetical protein SNOG_03762 [Phaeosphaeria nodorum SN15]
 gi|160706006|gb|EAT88967.2| hypothetical protein SNOG_03762 [Phaeosphaeria nodorum SN15]
          Length = 309

 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 78/163 (47%), Gaps = 11/163 (6%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQ-MSCPGMAQLLSNTLYYKR--FFPY 70
           D+ V+   G  +D++ L +LL +  +   +  N+  ++   +   L+  +Y +R  F P 
Sbjct: 128 DEVVVGFGGDVSDMQYLDRLLNSLDIRETYSSNETALNAKNLHTYLAKVMYNRRSKFDPL 187

Query: 71  YSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQ 130
           ++  ++ G+D E K  + + D +G+       + G G+ L  P L          +LP +
Sbjct: 188 WNHLLIAGMDGESKPFLASADLLGTTFSSPSLATGFGAHLAQPILRT--------ILPDE 239

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
            +V  +++ +AV+ +K C      RD  + DK  I V+ K G+
Sbjct: 240 ASVEKVTKEQAVEKIKECMKVLFYRDARSMDKYSIAVITKEGV 282


>gi|238488108|ref|XP_002375292.1| proteasome component Pre4, putative [Aspergillus flavus NRRL3357]
 gi|220700171|gb|EED56510.1| proteasome component Pre4, putative [Aspergillus flavus NRRL3357]
          Length = 260

 Score = 52.8 bits (125), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 16/173 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQ-HNKQMSCPGMAQLLSNTLYYKR--FFPY 70
           D  V+  SG  +D++ + +LL +  +   +  H   M+   +   LS  LY +R  F P 
Sbjct: 79  DSAVVGFSGDVSDMQYIDRLLESLDIRENYSTHGNMMNAKNLHTYLSKVLYKRRSEFNPL 138

Query: 71  YSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQ 130
           ++  ++ G D + K  + + D +G+     + + G G+ L +P L          L P +
Sbjct: 139 WNHILVAGFDEDKKPFLSSADLLGTTYSAPHLATGFGAHLAIPILRR--------LFPEE 190

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             +  +S+ EA   ++ C      RD  + DK  I V+   G+     E+++D
Sbjct: 191 KPLEEISKGEAEAALRECLKVLWYRDARSLDKYSIAVITAEGV-----EIKED 238


>gi|68069127|ref|XP_676474.1| beta3 proteasome subunit [Plasmodium berghei strain ANKA]
 gi|56496189|emb|CAH97578.1| beta3 proteasome subunit, putative [Plasmodium berghei]
          Length = 204

 Score = 52.8 bits (125), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 73/176 (41%), Gaps = 12/176 (6%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYY-- 71
           D   +  SG   D+++L +LL  R  +YQ +    M+    + +LSN LY  RF PY+  
Sbjct: 35  DHIYVGLSGLATDIQSLYELLRYRVNLYQIRQETDMNIDCFSNMLSNILYSNRFSPYFVN 94

Query: 72  ----SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLL 127
                F V   +D  G         + +Y+ +G   + S       F+ N + +     +
Sbjct: 95  PIVVGFKVNTHIDENGNKTNVYEPYLNAYDLIGAKCETS------DFVVNGVSNEQLYGM 148

Query: 128 PAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                +    E    + V  C  SA +RD  +G   E+ VL    I ++ ++ R D
Sbjct: 149 CESMYIKDQDENGLFETVSQCLLSALDRDCLSGWGAEVYVLTPDKIIKKKLKARMD 204


>gi|15897668|ref|NP_342273.1| proteasome subunit [Sulfolobus solfataricus P2]
 gi|284174993|ref|ZP_06388962.1| proteasome subunit [Sulfolobus solfataricus 98/2]
 gi|384434282|ref|YP_005643640.1| proteasome endopeptidase complex subunit beta [Sulfolobus
           solfataricus 98/2]
 gi|6015710|emb|CAB57537.1| proteasome, beta subunit [Sulfolobus solfataricus P2]
 gi|13813939|gb|AAK41063.1| Proteasome subunit [Sulfolobus solfataricus P2]
 gi|261602436|gb|ACX92039.1| proteasome endopeptidase complex, beta subunit [Sulfolobus
           solfataricus 98/2]
          Length = 225

 Score = 52.8 bits (125), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 22/166 (13%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQ---MSCPGMAQLLSNTLYYKRFFPY 70
           DK  + ++G  AD++ +  +L     IY +    +   +S  G+A  L+N L   ++FPY
Sbjct: 70  DKIGITTAGSVADLQFIYDVLKN---IYHYNSITKYGPISIKGIATRLANVLSATKYFPY 126

Query: 71  YSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQ 130
               ++GG D++ +  ++  D +G      Y + GSGS + M  L+++      L     
Sbjct: 127 IVQILIGGYDDQPR--LFNLDYLGDITEENYVATGSGSPVAMGVLEDEYNPKMTL----- 179

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHRE 176
                    EA DL K    SA +RD +TG  + +  ++  G H E
Sbjct: 180 --------DEAADLAKRAVFSAIKRDSFTGTGVIVAKIHSKG-HEE 216


>gi|393909340|gb|EFO25921.2| proteasome A-type and B-type family protein [Loa loa]
          Length = 232

 Score = 52.8 bits (125), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 16/170 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           ++ V+  SG  AD +A+  ++     +Y     + ++    AQ+  N LY  R     S 
Sbjct: 57  NRMVVCRSGSAADTQAISDIVKYYIEVYSMMEEEDVTVGRSAQIFRNFLYKYRDSLSASV 116

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            V G  D EG G +Y     G   R   ++ GSGST +  FLD+Q KS            
Sbjct: 117 LVAGYDDVEG-GQLYAIPLGGYVTRQRCAASGSGSTFVQGFLDSQWKS------------ 163

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             ++  +  ++V    A AT RD  +G  + + V++K G  R  M +R D
Sbjct: 164 -GMTAEKCKEIVLNAVALATIRDGSSGGVIRLAVIDKTGTQR--MLIRPD 210


>gi|227827648|ref|YP_002829428.1| proteasome endopeptidase complex protein [Sulfolobus islandicus
           M.14.25]
 gi|227830344|ref|YP_002832124.1| proteasome beta-type subunit [Sulfolobus islandicus L.S.2.15]
 gi|229579161|ref|YP_002837559.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.G.57.14]
 gi|229584852|ref|YP_002843354.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.27]
 gi|238619816|ref|YP_002914642.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.4]
 gi|284997769|ref|YP_003419536.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
 gi|302595712|sp|D2PK63.1|PSB1_SULID RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|302595725|sp|C4KHB0.1|PSB1_SULIK RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|302595727|sp|C3MQ16.1|PSB1_SULIL RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|302595742|sp|C3MVD5.1|PSB1_SULIM RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|302595747|sp|C3N5N4.1|PSB1_SULIA RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|302595752|sp|C3NE98.1|PSB1_SULIY RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|227456792|gb|ACP35479.1| Proteasome, beta-type subunit, conserved site [Sulfolobus
           islandicus L.S.2.15]
 gi|227459444|gb|ACP38130.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.14.25]
 gi|228009875|gb|ACP45637.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.G.57.14]
 gi|228019902|gb|ACP55309.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.27]
 gi|238380886|gb|ACR41974.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.4]
 gi|284445664|gb|ADB87166.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
          Length = 211

 Score = 52.8 bits (125), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 22/166 (13%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQ---MSCPGMAQLLSNTLYYKRFFPY 70
           DK  + ++G  AD++ +  +L     IY +    +   +S  G+A  L+N L   ++FPY
Sbjct: 56  DKIGITTAGSVADLQFIYDVLKN---IYHYNSITKYGPISIKGIATRLANVLSATKYFPY 112

Query: 71  YSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQ 130
               ++GG D++ +  ++  D +G      Y + GSGS + M  L+++      L     
Sbjct: 113 IVQILIGGYDDQPR--LFNLDYLGDITEENYVATGSGSPVAMGVLEDEYNPKMTL----- 165

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHRE 176
                    EA DL K    SA +RD +TG  + +  ++  G H E
Sbjct: 166 --------DEAADLAKRAVFSAIKRDSFTGTGVIVAKIHSKG-HEE 202


>gi|9910839|sp|Q9UXF3.2|PSB2_SULSO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
          Length = 208

 Score = 52.8 bits (125), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 22/166 (13%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQ---MSCPGMAQLLSNTLYYKRFFPY 70
           DK  + ++G  AD++ +  +L     IY +    +   +S  G+A  L+N L   ++FPY
Sbjct: 53  DKIGITTAGSVADLQFIYDVLKN---IYHYNSITKYGPISIKGIATRLANVLSATKYFPY 109

Query: 71  YSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQ 130
               ++GG D++ +  ++  D +G      Y + GSGS + M  L+++      L     
Sbjct: 110 IVQILIGGYDDQPR--LFNLDYLGDITEENYVATGSGSPVAMGVLEDEYNPKMTL----- 162

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHRE 176
                    EA DL K    SA +RD +TG  + +  ++  G H E
Sbjct: 163 --------DEAADLAKRAVFSAIKRDSFTGTGVIVAKIHSKG-HEE 199


>gi|302595900|sp|D0KTH0.2|PSB2_SULS9 RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
          Length = 211

 Score = 52.8 bits (125), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 22/166 (13%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQ---MSCPGMAQLLSNTLYYKRFFPY 70
           DK  + ++G  AD++ +  +L     IY +    +   +S  G+A  L+N L   ++FPY
Sbjct: 56  DKIGITTAGSVADLQFIYDVLKN---IYHYNSITKYGPISIKGIATRLANVLSATKYFPY 112

Query: 71  YSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQ 130
               ++GG D++ +  ++  D +G      Y + GSGS + M  L+++      L     
Sbjct: 113 IVQILIGGYDDQPR--LFNLDYLGDITEENYVATGSGSPVAMGVLEDEYNPKMTL----- 165

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHRE 176
                    EA DL K    SA +RD +TG  + +  ++  G H E
Sbjct: 166 --------DEAADLAKRAVFSAIKRDSFTGTGVIVAKIHSKG-HEE 202


>gi|121709886|ref|XP_001272559.1| proteasome component Pre4, putative [Aspergillus clavatus NRRL 1]
 gi|119400709|gb|EAW11133.1| proteasome component Pre4, putative [Aspergillus clavatus NRRL 1]
          Length = 260

 Score = 52.8 bits (125), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 80/173 (46%), Gaps = 16/173 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQ-HNKQMSCPGMAQLLSNTLYYKR--FFPY 70
           +  V+  SG  +D++ + +LL +  +   +  H   ++   +   LS   Y +R  F P 
Sbjct: 79  ESAVIGFSGDVSDMQYIDRLLESIDIRENYSTHGNMLNAKNLHTYLSKVFYKRRSEFNPL 138

Query: 71  YSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQ 130
           ++  ++ G D + +  + + D +G+     + + G G+ L +P L          L P +
Sbjct: 139 WNQVLVAGFDGDEQPFLSSADLLGTTFSAPHLATGFGAHLAVPILRR--------LFPEE 190

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             +  +++ EAVD ++ C      RD  + DK  + V++K G+     EL +D
Sbjct: 191 RPIEEITKEEAVDALRECLKVLWYRDARSLDKFSLAVISKDGV-----ELHED 238


>gi|302922263|ref|XP_003053429.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256734370|gb|EEU47716.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 261

 Score = 52.8 bits (125), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 75/171 (43%), Gaps = 22/171 (12%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLI-------YQHQHNKQMSCPGMAQLLSNTLYYK 65
           AD  V+   GF  D+  +Q L   RHLI       Y      +++   + + L+  LY +
Sbjct: 78  ADSSVV---GFSGDISDMQYL--DRHLIELSLDEAYTSPDAPRLNAANLHRYLAKLLYRR 132

Query: 66  R--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPS 123
           R  F P ++  ++ GLD++ K  +   D +GS       + G G+ L  P +   +    
Sbjct: 133 RSKFDPLWNHLLVAGLDDDDKPFLAAADLLGSTYSSPSLATGFGAMLAQPIMRRHV---- 188

Query: 124 PLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIH 174
               P ++A   L +  AVD++K C      RD  + D   + ++ K G+ 
Sbjct: 189 ----PDEEAAQNLDKDGAVDIIKECMKVLFYRDARSLDSYSLAIVTKDGVE 235


>gi|70606695|ref|YP_255565.1| proteasome beta subunit [Sulfolobus acidocaldarius DSM 639]
 gi|449066918|ref|YP_007434000.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius N8]
 gi|449069190|ref|YP_007436271.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius
           Ron12/I]
 gi|121725055|sp|Q4JAA8.1|PSB2_SULAC RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|68567343|gb|AAY80272.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius DSM
           639]
 gi|449035426|gb|AGE70852.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius N8]
 gi|449037698|gb|AGE73123.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius
           Ron12/I]
          Length = 203

 Score = 52.8 bits (125), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 22/166 (13%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQH---NKQMSCPGMAQLLSNTLYYKRFFPY 70
           D   + ++G  AD   LQ +  A   IY          ++  G+A  L+N L   ++FPY
Sbjct: 49  DNIGITTAGSVAD---LQFIYEALKYIYHRNSITGEGPITVKGIATWLANVLSSSKYFPY 105

Query: 71  YSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQ 130
               ++GG+D++ +  +Y  D +G      Y++ GSGS   +  L++  K          
Sbjct: 106 LVQILIGGVDDQPR--LYNLDYLGDITEEEYTATGSGSPEALGVLEDNYKP--------- 154

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHRE 176
                +S  EA +L K    S+ +RD +TG  + +  + K G H E
Sbjct: 155 ----EMSLDEAAELAKRAIFSSIKRDSFTGTGVIVTKITKNG-HEE 195


>gi|156095029|ref|XP_001613550.1| 20S proteasome subunit beta-3 [Plasmodium vivax Sal-1]
 gi|148802424|gb|EDL43823.1| 20S proteasome subunit beta-3, putative [Plasmodium vivax]
          Length = 218

 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 12/169 (7%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYY------SFN 74
           SG   D++ L +LL  R  +Y+ +    M     A +LS+ LY  RF PY+       F 
Sbjct: 56  SGLATDIQTLYELLRYRVNLYEIRQETPMDIDCFANMLSSILYANRFSPYFVNPIVVGFR 115

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 134
           V   LD+EGK        + +Y+ +G   +         F+ N + S     +     + 
Sbjct: 116 VQHTLDDEGKKVCSFEPYLTAYDLIGAKCETK------DFVVNGVTSEQLYGMCESLYIK 169

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              +    + +  C  SA +RD  +G   E+ VL    I ++ ++ R D
Sbjct: 170 DQDKDGLFETISQCLLSALDRDCLSGWGAEVYVLTPDTIMKKKLKARMD 218


>gi|170291023|ref|YP_001737839.1| proteasome endopeptidase complex protein [Candidatus Korarchaeum
           cryptofilum OPF8]
 gi|302595829|sp|B1L6S7.1|PSB1_KORCO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|170175103|gb|ACB08156.1| Proteasome endopeptidase complex [Candidatus Korarchaeum
           cryptofilum OPF8]
          Length = 206

 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 77/163 (47%), Gaps = 18/163 (11%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D  V   SG  AD + L   +     +Y     + +S  G+A++L+  L  +R+ PY+  
Sbjct: 44  DYAVATISGLVADGQYLVNNVRTIADLYSLDTERPLSVRGIARILAFLL--RRYRPYFLL 101

Query: 74  N--VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
              ++GG+D EG   ++  D  G+     Y + GSGS + +  +++   SP         
Sbjct: 102 AQLIVGGVDREG-AHLFNVDPFGTLTEEDYLATGSGSPVAISVIESGY-SPD-------- 151

Query: 132 AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIH 174
               +    A+ LV +   +A  RD  TGD +++VV++  G++
Sbjct: 152 ----MDRESALRLVISSMTAALSRDAATGDGIDVVVIDDRGVN 190


>gi|126138200|ref|XP_001385623.1| hypothetical protein PICST_62487 [Scheffersomyces stipitis CBS
           6054]
 gi|126092901|gb|ABN67594.1| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 206

 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 80/172 (46%), Gaps = 13/172 (7%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            DK  +  +G  +DV  L ++   ++ +Y+ +  +Q+    +A L+S+TLY KRF PY+ 
Sbjct: 47  GDKTFLGLTGLASDVTTLSEVFRFKNNLYKLREERQIEPKTLANLVSSTLYEKRFGPYFI 106

Query: 73  FNVLGGLDNE-GKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
             ++ GLD++  K  +  +D +G  +          +T  +  +   L  P+   L  +D
Sbjct: 107 GPIVAGLDSKTSKPFICGFDLIGCIDFAKDFIVSGTATDQLYGMCESLYEPN---LEPED 163

Query: 132 AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
               +S+A           +A +RD  +G    + V+ K  + +  +  R+D
Sbjct: 164 LFETISQA---------LLNAVDRDALSGWGAIVYVVTKDKVVKRVLRTRQD 206


>gi|145514243|ref|XP_001443032.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124410393|emb|CAK75635.1| unnamed protein product [Paramecium tetraurelia]
          Length = 204

 Score = 52.4 bits (124), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 1/81 (1%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D  ++A SG  +D+     L+     +Y  + N++M     A L+++ LY +RF P++  
Sbjct: 48  DNILLALSGLNSDIHTFYALMEKEINLYNLKENRKMKPTTFANLVASALYERRFGPFFVT 107

Query: 74  NVLGGLDNEGKGCVYTYDAVG 94
            ++ GL+N GK  + TYD++G
Sbjct: 108 PIVAGLEN-GKPILATYDSIG 127


>gi|68510416|gb|AAY98499.1| LMP X [Swiftia exserta]
          Length = 268

 Score = 52.4 bits (124), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 14/152 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G  AD    +++LA +  IY+ ++ +++S    ++LL+N +YY R        ++ G D
Sbjct: 110 AGGAADCSYWERVLAKQCRIYELRNKERISVAAASKLLANMVYYYRGMGLSMGTMICGWD 169

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
             G G  Y  D+ GS       S GSGST     LD+  +               LS  E
Sbjct: 170 KRGPGLYYV-DSDGSRLSNNIFSVGSGSTFAYGVLDSGYR-------------PDLSVQE 215

Query: 141 AVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
           A DL +     AT RD Y+G  + +  + + G
Sbjct: 216 AYDLGERAIYHATHRDAYSGGVVNMYHMQETG 247


>gi|448738912|ref|ZP_21720932.1| proteasome beta subunit [Halococcus thailandensis JCM 13552]
 gi|445800726|gb|EMA51074.1| proteasome beta subunit [Halococcus thailandensis JCM 13552]
          Length = 228

 Score = 52.4 bits (124), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 16/162 (9%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           +  +  SG  +  +AL   L A   +Y+ +  ++MS   ++ L SN L    F  Y    
Sbjct: 74  RGALTISGAVSAAQALISNLRAEADLYEARRGEEMSMQALSTLTSNFLRSGAF--YIVQP 131

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 134
           +LGG+D+EG   +Y+ D  GS     Y + GSGS      L+ Q +              
Sbjct: 132 ILGGVDDEG-AHIYSIDPAGSVMEEEYDATGSGSPFAYGVLEQQYED------------- 177

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHRE 176
            LS  EA  +      SA ERD  +G+ + +  + + G+  E
Sbjct: 178 GLSNDEARTVAARAVKSAVERDTASGNGIILSEITEDGVEIE 219


>gi|298508229|pdb|1VSY|H Chain H, Proteasome Activator Complex
 gi|298508243|pdb|1VSY|V Chain V, Proteasome Activator Complex
 gi|298508445|pdb|3L5Q|B Chain B, Proteasome Activator Complex
 gi|298508459|pdb|3L5Q|D Chain D, Proteasome Activator Complex
          Length = 196

 Score = 52.4 bits (124), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 70/162 (43%), Gaps = 15/162 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK     SG  AD +A+  ++     +Y  Q+    +    A  +   L Y+      + 
Sbjct: 39  DKIWCCRSGSAADTQAIADIVQYHLELYTSQYGTPST--ETAASVFKELCYENKDNLTAG 96

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++ G D++ KG VYT    GS  ++ Y+  GSGST I  + D   +             
Sbjct: 97  IIVAGYDDKNKGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRE------------ 144

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHR 175
             +S+ E VD +K   + A + D  +G  + +VVL   G+ R
Sbjct: 145 -NMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVLTAAGVER 185


>gi|476044|emb|CAA55591.1| proteasomal subunit Pre3 [Saccharomyces cerevisiae]
 gi|854572|emb|CAA60921.1| proteasome component pre3 [Saccharomyces cerevisiae]
 gi|207343916|gb|EDZ71228.1| YJL001Wp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|323304338|gb|EGA58111.1| Pre3p [Saccharomyces cerevisiae FostersB]
 gi|323354485|gb|EGA86324.1| Pre3p [Saccharomyces cerevisiae VL3]
 gi|365764803|gb|EHN06323.1| Pre3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
 gi|741845|prf||2008180A peptidyl-Glu protease
          Length = 193

 Score = 52.4 bits (124), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 70/162 (43%), Gaps = 15/162 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK     SG  AD +A+  ++     +Y  Q+    +    A  +   L Y+      + 
Sbjct: 36  DKIWCCRSGSAADTQAIADIVQYHLELYTSQYGTPST--ETAASVFKELCYENKDNLTAG 93

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++ G D++ KG VYT    GS  ++ Y+  GSGST I  + D   +             
Sbjct: 94  IIVAGYDDKNKGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRE------------ 141

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHR 175
             +S+ E VD +K   + A + D  +G  + +VVL   G+ R
Sbjct: 142 -NMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVLTAAGVER 182


>gi|408404082|ref|YP_006862065.1| proteasome subunit beta [Candidatus Nitrososphaera gargensis Ga9.2]
 gi|408364678|gb|AFU58408.1| proteasome, subunit beta [Candidatus Nitrososphaera gargensis
           Ga9.2]
          Length = 219

 Score = 52.4 bits (124), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 17/166 (10%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLG 77
           M  +G  AD + L   +     +Y+ Q+ + M     A+L SN L+ +R+FPYY   ++ 
Sbjct: 62  MTIAGGVADAQNLVDTMRYNANLYRFQNKELMPVKSAARLCSNILFNQRYFPYYVQIIMA 121

Query: 78  GLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLS 137
           G        ++  D  GS     + S GSGS +   +L+++ +               +S
Sbjct: 122 GYTKNEGSQIHNIDLFGSMTTEKFISTGSGSPVAYGYLESEYRD-------------GMS 168

Query: 138 EAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             +A  +     A+A  R+  TGD + +V+++K G    Y EL K+
Sbjct: 169 VNDAYKVAMQAIAAAIRRNAGTGDSINVVIIDKNG----YRELSKE 210


>gi|66825821|ref|XP_646265.1| proteasome subunit beta type 3 [Dictyostelium discoideum AX4]
 gi|74858609|sp|Q55D66.1|PSB3_DICDI RecName: Full=Proteasome subunit beta type-3
 gi|60474299|gb|EAL72236.1| proteasome subunit beta type 3 [Dictyostelium discoideum AX4]
          Length = 205

 Score = 52.4 bits (124), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 40/67 (59%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DKC +  SG   D + L + L  RH +Y+ +  + MS   ++ LL+N LY KRF PY++ 
Sbjct: 47  DKCFVGISGLVTDAQTLYQKLVFRHNLYKLREERDMSPRVVSNLLTNMLYEKRFGPYFTE 106

Query: 74  NVLGGLD 80
            ++ GL+
Sbjct: 107 PLICGLE 113


>gi|254571735|ref|XP_002492977.1| Beta 1 subunit of the 20S proteasome, responsible for cleavage
           after acidic residues in peptides [Komagataella pastoris
           GS115]
 gi|238032775|emb|CAY70798.1| Beta 1 subunit of the 20S proteasome, responsible for cleavage
           after acidic residues in peptides [Komagataella pastoris
           GS115]
 gi|328353009|emb|CCA39407.1| 20S proteasome subunit beta 1 [Komagataella pastoris CBS 7435]
          Length = 216

 Score = 52.4 bits (124), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 14/155 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           SG  AD +A+  ++     +Y+ QH    +    A L    L Y       +  +  G D
Sbjct: 65  SGSAADTQAVADIVKYHLELYEAQHGAPPTTKIAASLFQE-LCYNNKDALTAGIICAGYD 123

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
           ++ KG +Y+    GS  +  Y+  GSGST I  + +   KS              ++  E
Sbjct: 124 DKEKGAIYSIPIGGSIHKQEYAIAGSGSTFIYGYCNKNFKS-------------NMTRDE 170

Query: 141 AVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHR 175
            V+ +KT  + A + D  +G  + +VVL   G+ R
Sbjct: 171 TVEFIKTSLSQAIKWDGSSGGVIRMVVLTASGVER 205


>gi|11513426|pdb|1G65|N Chain N, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
           Molecular Basis For Selectivity Of
           Alpha,Beta-Epoxyketone Proteasome Inhibitors
 gi|11513440|pdb|1G65|2 Chain 2, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
           Molecular Basis For Selectivity Of
           Alpha,Beta-Epoxyketone Proteasome Inhibitors
 gi|11514005|pdb|1G0U|N Chain N, A Gated Channel Into The Proteasome Core Particle
 gi|11514019|pdb|1G0U|2 Chain 2, A Gated Channel Into The Proteasome Core Particle
 gi|14488812|pdb|1FNT|H Chain H, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|14488826|pdb|1FNT|V Chain V, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|20150390|pdb|1JD2|N Chain N, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
           Complex: A Non- Covalent Proteasome Inhibitor
 gi|20150397|pdb|1JD2|U Chain U, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
           Complex: A Non- Covalent Proteasome Inhibitor
 gi|75765706|pdb|1Z7Q|H Chain H, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|75765720|pdb|1Z7Q|V Chain V, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|93279381|pdb|2F16|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Bortezomib
 gi|93279395|pdb|2F16|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Bortezomib
 gi|99032215|pdb|2FAK|N Chain N, Crystal Structure Of Salinosporamide A In Complex With The
           Yeast 20s Proteasome
 gi|99032229|pdb|2FAK|2 Chain 2, Crystal Structure Of Salinosporamide A In Complex With The
           Yeast 20s Proteasome
 gi|112490856|pdb|2GPL|N Chain N, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
           Proteasome Inhibitors
 gi|112490870|pdb|2GPL|2 Chain 2, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
           Proteasome Inhibitors
 gi|178847473|pdb|2ZCY|N Chain N, Yeast 20s Proteasome:syringolin A-Complex
 gi|178847487|pdb|2ZCY|1 Chain 1, Yeast 20s Proteasome:syringolin A-Complex
 gi|178847515|pdb|3BDM|N Chain N, Yeast 20s Proteasome:glidobactin A-Complex
 gi|178847529|pdb|3BDM|1 Chain 1, Yeast 20s Proteasome:glidobactin A-Complex
 gi|190016380|pdb|3D29|N Chain N, Proteasome Inhibition By Fellutamide B
 gi|190016394|pdb|3D29|2 Chain 2, Proteasome Inhibition By Fellutamide B
 gi|197725334|pdb|3E47|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Homobelactosin C
 gi|197725348|pdb|3E47|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Homobelactosin C
 gi|211939225|pdb|3DY3|N Chain N, Crystal Structure Of Yeast 20s Proteasome In Complex With
           The Epimer Form Of Spirolactacystin
 gi|211939239|pdb|3DY3|2 Chain 2, Crystal Structure Of Yeast 20s Proteasome In Complex With
           The Epimer Form Of Spirolactacystin
 gi|211939253|pdb|3DY4|N Chain N, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Spirolactacystin
 gi|211939267|pdb|3DY4|2 Chain 2, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Spirolactacystin
 gi|238828250|pdb|3GPJ|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Syringolin B
 gi|238828264|pdb|3GPJ|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Syringolin B
 gi|258588334|pdb|3GPT|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Slow Substrate Ligand
 gi|258588348|pdb|3GPT|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Slow Substrate Ligand
 gi|258588362|pdb|3GPW|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Irreversible Inhibitor
           Ligand
 gi|258588376|pdb|3GPW|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Irreversible Inhibitor
           Ligand
 gi|258588556|pdb|3HYE|N Chain N, Crystal Structure Of 20s Proteasome In Complex With
           Hydroxylated Salinosporamide
 gi|258588570|pdb|3HYE|2 Chain 2, Crystal Structure Of 20s Proteasome In Complex With
           Hydroxylated Salinosporamide
 gi|330689394|pdb|3MG4|N Chain N, Structure Of Yeast 20s Proteasome With Compound 1
 gi|330689408|pdb|3MG4|2 Chain 2, Structure Of Yeast 20s Proteasome With Compound 1
 gi|333361157|pdb|3MG0|N Chain N, Structure Of Yeast 20s Proteasome With Bortezomib
 gi|333361171|pdb|3MG0|2 Chain 2, Structure Of Yeast 20s Proteasome With Bortezomib
 gi|333361185|pdb|3MG6|N Chain N, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           6
 gi|333361199|pdb|3MG6|2 Chain 2, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           6
 gi|333361213|pdb|3MG7|N Chain N, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           8
 gi|333361227|pdb|3MG7|2 Chain 2, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           8
 gi|333361241|pdb|3MG8|N Chain N, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           16
 gi|333361255|pdb|3MG8|2 Chain 2, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           16
 gi|335892354|pdb|3OKJ|N Chain N, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
           Structure Motif For Proteasome Inhibition
 gi|335892368|pdb|3OKJ|2 Chain 2, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
           Structure Motif For Proteasome Inhibition
 gi|340780432|pdb|3OEU|N Chain N, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           24
 gi|340780446|pdb|3OEU|2 Chain 2, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           24
 gi|340780460|pdb|3OEV|N Chain N, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           25
 gi|340780474|pdb|3OEV|2 Chain 2, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           25
 gi|350610685|pdb|3TDD|N Chain N, Crystal Structure Of Yeast Cp In Complex With Belactosin C
 gi|350610699|pdb|3TDD|2 Chain 2, Crystal Structure Of Yeast Cp In Complex With Belactosin C
 gi|359545859|pdb|3SHJ|N Chain N, Proteasome In Complex With Hydroxyurea Derivative Hu10
 gi|359545873|pdb|3SHJ|2 Chain 2, Proteasome In Complex With Hydroxyurea Derivative Hu10
 gi|378792254|pdb|3UN4|N Chain N, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
 gi|378792268|pdb|3UN4|BB Chain b, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
 gi|378792288|pdb|3UN8|N Chain N, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
 gi|378792302|pdb|3UN8|BB Chain b, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
 gi|390980829|pdb|3SDI|N Chain N, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           20
 gi|390980843|pdb|3SDI|2 Chain 2, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           20
 gi|390980857|pdb|3SDK|N Chain N, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           34
 gi|390980871|pdb|3SDK|2 Chain 2, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           34
 gi|402550745|pdb|4GK7|N Chain N, Yeast 20s Proteasome In Complex With The
           Syringolin-Glidobactin Chimera
 gi|402550759|pdb|4GK7|BB Chain b, Yeast 20s Proteasome In Complex With The
           Syringolin-Glidobactin Chimera
 gi|403072198|pdb|4G4S|H Chain H, Structure Of Proteasome-Pba1-Pba2 Complex
 gi|409973873|pdb|4FZC|N Chain N, 20s Yeast Proteasome In Complex With Cepafungin I
 gi|409973887|pdb|4FZC|BB Chain b, 20s Yeast Proteasome In Complex With Cepafungin I
 gi|409973901|pdb|4FZG|N Chain N, 20s Yeast Proteasome In Complex With Glidobactin
 gi|409973915|pdb|4FZG|BB Chain b, 20s Yeast Proteasome In Complex With Glidobactin
 gi|444302352|pdb|4INR|N Chain N, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
           Lu102
 gi|444302366|pdb|4INR|BB Chain b, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
           Lu102
 gi|444302380|pdb|4INT|N Chain N, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
           Lu122
 gi|444302394|pdb|4INT|BB Chain b, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
           Lu122
 gi|444302408|pdb|4INU|N Chain N, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
           Lu112
 gi|444302422|pdb|4INU|BB Chain b, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
           Lu112
          Length = 196

 Score = 52.4 bits (124), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 70/162 (43%), Gaps = 15/162 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK     SG  AD +A+  ++     +Y  Q+    +    A  +   L Y+      + 
Sbjct: 39  DKIWCCRSGSAADTQAIADIVQYHLELYTSQYGTPST--ETAASVFKELCYENKDNLTAG 96

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++ G D++ KG VYT    GS  ++ Y+  GSGST I  + D   +             
Sbjct: 97  IIVAGYDDKNKGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRE------------ 144

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHR 175
             +S+ E VD +K   + A + D  +G  + +VVL   G+ R
Sbjct: 145 -NMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVLTAAGVER 185


>gi|410084182|ref|XP_003959668.1| hypothetical protein KAFR_0K01790 [Kazachstania africana CBS 2517]
 gi|372466260|emb|CCF60533.1| hypothetical protein KAFR_0K01790 [Kazachstania africana CBS 2517]
          Length = 205

 Score = 52.4 bits (124), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 81/165 (49%), Gaps = 15/165 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G   DV  L ++   +  +Y+ + ++ +     AQL+S+TLY +RF PY+   V+ G++
Sbjct: 54  TGLATDVTTLNEVFRYKTNLYKLKEDRAIEPETFAQLVSSTLYERRFGPYFVGPVVAGIN 113

Query: 81  NE-GKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSE 138
           ++ GK  +  +D +G  +    +   G+ S  +    ++ L  P+   L A+D    +S+
Sbjct: 114 SKSGKPFIAGFDLIGCIDEAKDFIVSGTASDQLFGMCES-LYEPN---LEAEDLFETISQ 169

Query: 139 AEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           A           +A +RD  +G    + ++ K  + +  + +R+D
Sbjct: 170 A---------LLNAADRDALSGWGAVVYIIKKDKVIKRNLRMRQD 205


>gi|70991377|ref|XP_750537.1| proteasome component Pre4 [Aspergillus fumigatus Af293]
 gi|66848170|gb|EAL88499.1| proteasome component Pre4, putative [Aspergillus fumigatus Af293]
 gi|159124093|gb|EDP49211.1| proteasome component Pre4, putative [Aspergillus fumigatus A1163]
          Length = 260

 Score = 52.4 bits (124), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/164 (22%), Positives = 74/164 (45%), Gaps = 11/164 (6%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQ-HNKQMSCPGMAQLLSNTLYYKR--FFP 69
            +  V+  SG  +D++ + +LL +  +   +  H   ++   +   LS   Y +R  F P
Sbjct: 78  GESAVIGFSGDVSDMQHIDRLLESIDIRENYSTHGNTLNAKNLHTYLSKVFYKRRSEFNP 137

Query: 70  YYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA 129
            ++  ++ G D   +  + + D +G+     + + G G+ L +P L          L P 
Sbjct: 138 LWNQVLVAGFDGNNQPFLSSADLLGTTFSAPHLATGFGAHLAIPILRR--------LFPE 189

Query: 130 QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
           +  V  +++ EAV+ +K C      RD  + DK  + V+ K G+
Sbjct: 190 EKPVEEITKEEAVNALKECLKVLWYRDARSLDKFSLAVITKEGV 233


>gi|448414651|ref|ZP_21577664.1| proteasome subunit beta [Halosarcina pallida JCM 14848]
 gi|445681760|gb|ELZ34188.1| proteasome subunit beta [Halosarcina pallida JCM 14848]
          Length = 243

 Score = 52.4 bits (124), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 20/164 (12%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G  +  ++L + + A   +Y+ +  + MS   ++ LL N L    F  Y    +LGG+D
Sbjct: 95  AGSVSAAQSLIRSIRAEVRLYESRRGENMSMTALSTLLGNFLRSGAF--YVVQPILGGVD 152

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
            +G   +Y+ D  GS     Y+  GSGS   +  L+ +            DA   LS  E
Sbjct: 153 EDGP-HIYSIDPAGSILEEEYTVTGSGSQYALGVLEQEYN----------DA---LSIDE 198

Query: 141 AVDLVKTCFASATERDIYTGDKLEIVVLNKGGI----HREYMEL 180
           A  +      SA ERD+ +G+ + I V+ + G+    H+++ E+
Sbjct: 199 AKTVAARAVKSAVERDLASGNGINICVVTEDGVEITQHKDFEEV 242


>gi|119467912|ref|XP_001257762.1| proteasome component Pre4, putative [Neosartorya fischeri NRRL 181]
 gi|119405914|gb|EAW15865.1| proteasome component Pre4, putative [Neosartorya fischeri NRRL 181]
          Length = 260

 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 37/163 (22%), Positives = 74/163 (45%), Gaps = 11/163 (6%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQ-HNKQMSCPGMAQLLSNTLYYKR--FFPY 70
           +  V+  SG  +D++ + +LL +  +   +  H   ++   +   LS   Y +R  F P 
Sbjct: 79  ESAVIGFSGDVSDMQHIDRLLESIDIRENYSTHGNTLNAKNLHTYLSKVFYKRRSEFNPL 138

Query: 71  YSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQ 130
           ++  ++ G D   +  + + D +G+     + + G G+ L +P L          L P +
Sbjct: 139 WNQVLVAGFDGNNQPFLSSADLLGTTFSAPHLATGFGAHLAIPILRR--------LFPDE 190

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
             V  +++ EAV+ +K C      RD  + DK  + V+ K G+
Sbjct: 191 KTVEEITKEEAVNALKECLKVLWYRDARSLDKFSLAVITKEGV 233


>gi|387593397|gb|EIJ88421.1| hypothetical protein NEQG_01111 [Nematocida parisii ERTm3]
 gi|387597054|gb|EIJ94674.1| hypothetical protein NEPG_00197 [Nematocida parisii ERTm1]
          Length = 204

 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 16/173 (9%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            D+ +++ +GF  D + L K L     +++    +++     A LLS  LY KRF P+  
Sbjct: 46  TDRLILSLTGFVPDCQILYKTLRKHVNMFKLNEQREIEPKEFACLLSYILYSKRFSPFLI 105

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYE-RVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
             ++ G D E    VYT D +G       ++S G+ ST +    D          L  +D
Sbjct: 106 SPLIVGFDRENNPHVYTMDLIGCMSAHKDFASTGTASTNLTGIADVLFTEG----LEEED 161

Query: 132 AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG-IHREYMELRKD 183
             T   +A         F +A +R+  +G   ++++L     +HRE ++ R+D
Sbjct: 162 LFTTAVQA---------FLNAIDRNALSGWGSDVIILTPSKRVHRE-VKTRQD 204


>gi|3114276|pdb|1RYP|H Chain H, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
           Angstroms Resolution
 gi|3114290|pdb|1RYP|V Chain V, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
           Angstroms Resolution
          Length = 205

 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 70/162 (43%), Gaps = 15/162 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK     SG  AD +A+  ++     +Y  Q+    +    A  +   L Y+      + 
Sbjct: 48  DKIWCCRSGSAADTQAIADIVQYHLELYTSQYGTPST--ETAASVFKELCYENKDNLTAG 105

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++ G D++ KG VYT    GS  ++ Y+  GSGST I  + D   +             
Sbjct: 106 IIVAGYDDKNKGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRE------------ 153

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHR 175
             +S+ E VD +K   + A + D  +G  + +VVL   G+ R
Sbjct: 154 -NMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVLTAAGVER 194


>gi|440634790|gb|ELR04709.1| 20S proteasome subunit beta 7 [Geomyces destructans 20631-21]
          Length = 238

 Score = 52.0 bits (123), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 11/161 (6%)

Query: 16  CVMASSGFQADVKALQKLLAARHLIYQHQHNKQ-MSCPGMAQLLSNTLYYKR--FFPYYS 72
            V+   G  +D++ L +LL +  +   +  +   ++   +   LS  LY +R  F P ++
Sbjct: 85  AVIGFGGDVSDMQYLDRLLQSLSIEEAYSSSGHGLTAENVHTYLSKVLYKRRSDFNPLWN 144

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
             ++ GLD      + + D +G+       + G G+ L +P L    KS        ++A
Sbjct: 145 HLLVAGLDGADAPFLASADLLGTTFSAPCLATGFGAHLAVPLLRKVAKS--------EEA 196

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
           V  L+E EAV  VK C      RD  + D+  I V+ KGG+
Sbjct: 197 VKELTEEEAVRAVKECLKVLYYRDARSTDRYSIAVVKKGGV 237


>gi|335345796|gb|AEH41478.1| proteasome component Pup3 [Endocarpon pusillum]
          Length = 206

 Score = 52.0 bits (123), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 77/173 (44%), Gaps = 15/173 (8%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           A  C +  +G   DV  +  L   R  +Y+ +  + +S   +A L+S++LY +RF PY+ 
Sbjct: 47  APSCYLGLTGLATDVSTVSDLFRYRVNMYRLREERNISPQTLANLVSSSLYERRFGPYFV 106

Query: 73  FNVLGGLDN-EGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQ 130
             VL G+++  GK  +  +D++G  +    +   G+ S       D    +   L  P  
Sbjct: 107 SPVLAGINHTTGKPFICGFDSIGCIDFAKDFIVGGTAS-------DQLFGTCEGLWEP-- 157

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                L   E  + V     +A +RD  +G    + ++ K  + +  ++ R+D
Sbjct: 158 ----DLEPDELFETVSQALLNAVDRDALSGWGAHVYIIEKDKVTKRLLKGRQD 206


>gi|365759936|gb|EHN01692.1| Pre3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
 gi|401840755|gb|EJT43449.1| PRE3-like protein [Saccharomyces kudriavzevii IFO 1802]
          Length = 193

 Score = 52.0 bits (123), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 70/162 (43%), Gaps = 15/162 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK     SG  AD +A+  ++     +Y  Q+    +    A  +   L Y+      + 
Sbjct: 36  DKIWCCRSGSAADTQAIADIVQYHLELYTSQYGPPST--ETAASVFKELCYENKDNLTAG 93

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++ G D++ KG VYT    GS  ++ Y+  GSGST I  + D   +             
Sbjct: 94  IIVAGYDDKNKGEVYTIPIGGSVHKLPYAIAGSGSTFIYGYCDKNFRE------------ 141

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHR 175
             +S+ E VD +K   + A + D  +G  + +VVL   G+ R
Sbjct: 142 -NMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVLTADGVER 182


>gi|357016905|gb|AET50481.1| hypothetical protein [Eimeria tenella]
          Length = 236

 Score = 52.0 bits (123), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 40/59 (67%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           +C +ASSG QAD+  L KLL AR  +Y+H H  + S P ++QLLS+ LY +RFFP   F
Sbjct: 76  RCCIASSGMQADINTLHKLLKARVAVYRHLHRAEPSGPALSQLLSSLLYSRRFFPLLHF 134


>gi|261201474|ref|XP_002627137.1| 20S proteasome peptidase [Ajellomyces dermatitidis SLH14081]
 gi|239592196|gb|EEQ74777.1| 20S proteasome peptidase [Ajellomyces dermatitidis SLH14081]
 gi|239611645|gb|EEQ88632.1| proteasome component Pup3 [Ajellomyces dermatitidis ER-3]
 gi|327348342|gb|EGE77199.1| proteasome subunit beta type [Ajellomyces dermatitidis ATCC 18188]
          Length = 192

 Score = 52.0 bits (123), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 15/165 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G   DV  +  +L  +  +Y+ +  + +S   +A L S+TLY KRF PY+   VL G+D
Sbjct: 41  TGLATDVSTVSDVLRFKVNMYRLREERHISPKTLANLTSSTLYEKRFGPYFVSPVLAGID 100

Query: 81  N-EGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSE 138
           N  GK  +  +D++G  +    +   G+ S       D    +   L  P       L  
Sbjct: 101 NTTGKPFICGFDSIGCIDFAQDFIVSGTAS-------DQLFGTCEGLWEP------DLGP 147

Query: 139 AEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            +  + +     +A +RD  +G    + ++ K  + +  ++ R+D
Sbjct: 148 DDLFETISQALLNAVDRDALSGWGAHVYIIEKDKVTKRLLKGRQD 192


>gi|161529236|ref|YP_001583062.1| proteasome endopeptidase complex protein [Nitrosopumilus maritimus
           SCM1]
 gi|302595719|sp|A9A2U7.1|PSB2_NITMS RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|160340537|gb|ABX13624.1| Proteasome endopeptidase complex [Nitrosopumilus maritimus SCM1]
          Length = 210

 Score = 52.0 bits (123), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 14/159 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   +  +G  AD + +  +L     +++ + +  +S   +A+L S   +  R +P+ + 
Sbjct: 51  DHAGLTLAGGVADAQNIVDILRYHSNLHRVEKHGPISIHSLARLCSLIFHQNRGYPFMAD 110

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++GG D EG   ++  D  GS E+  Y + GSGS +    L+ + +             
Sbjct: 111 ILVGGYDAEGP-ALFNIDMFGSVEKKAYVTTGSGSPVAYGLLEEEYRE------------ 157

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
             L+  EA  +      +A  R+I TGD + I +++K G
Sbjct: 158 -DLTVEEAKKIALRAVKAAIVRNIGTGDGINIAIMDKDG 195


>gi|367001775|ref|XP_003685622.1| hypothetical protein TPHA_0E00940 [Tetrapisispora phaffii CBS 4417]
 gi|357523921|emb|CCE63188.1| hypothetical protein TPHA_0E00940 [Tetrapisispora phaffii CBS 4417]
          Length = 205

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 79/165 (47%), Gaps = 15/165 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G   DV  L ++   +  +Y+ +  + +      QL+S+TLY KRF PY+   V+ G++
Sbjct: 54  TGLATDVTTLNEVFRYKTNLYKLKEERPIEPETFTQLVSSTLYEKRFGPYFVGPVVAGIN 113

Query: 81  NE-GKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSE 138
           ++ GK  +  +D +G  +    +   G+ S  +    ++ L  P+   L A+D    +S+
Sbjct: 114 SKSGKPFIAGFDLIGCIDEAKDFIVSGTASDQLFGMCES-LYEPN---LEAEDLFETISQ 169

Query: 139 AEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           A           SA +RD  +G    + ++ K  + + ++  R+D
Sbjct: 170 A---------LLSAADRDALSGWGAVVYIIKKDKVIKRHLRTRQD 205


>gi|150400310|ref|YP_001324077.1| proteasome endopeptidase complex [Methanococcus vannielii SB]
 gi|302595790|sp|A6USJ3.1|PSB_METVS RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|150013013|gb|ABR55465.1| Proteasome endopeptidase complex [Methanococcus vannielii SB]
          Length = 219

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 73/161 (45%), Gaps = 14/161 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   M  +G   D ++L +LL+A   IY+ +    M+      L SN L+  R +P  + 
Sbjct: 53  DYIAMTIAGSVGDAQSLIRLLSAEAKIYKMRTGNNMTPLSCTTLTSNVLHGNRHYPLLTQ 112

Query: 74  NVLGGLDNEGKGCVYTYDAVGSY-ERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            ++GG D      +++ D VG   E   +++ GSGS      L+ + KS           
Sbjct: 113 LIIGGYDLINGPKLFSLDPVGGINEESSFTATGSGSPTAYGVLEAEYKS----------- 161

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
              ++  + + +      SA +RD Y+G+ + +  ++K G+
Sbjct: 162 --EINIEKGLLIAVKALISAMQRDAYSGNGISLAKIDKTGV 200


>gi|6322459|ref|NP_012533.1| Pre3p [Saccharomyces cerevisiae S288c]
 gi|1172606|sp|P38624.2|PSB1_YEAST RecName: Full=Proteasome subunit beta type-1; AltName:
           Full=Macropain subunit PRE3; AltName:
           Full=Multicatalytic endopeptidase complex subunit PRE3;
           AltName: Full=Proteasome component PRE3; AltName:
           Full=Proteinase YSCE subunit PRE3; Flags: Precursor
 gi|323462949|pdb|3NZJ|N Chain N, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Ligand 2a
 gi|323462963|pdb|3NZJ|2 Chain 2, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Ligand 2a
 gi|323462977|pdb|3NZW|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With 2b
 gi|323462991|pdb|3NZW|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With 2b
 gi|323463005|pdb|3NZX|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Ligand 2c
 gi|323463019|pdb|3NZX|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Ligand 2c
 gi|403071954|pdb|4B4T|1 Chain 1, Near-Atomic Resolution Structural Model Of The Yeast 26s
           Proteasome
 gi|2131077|emb|CAA89290.1| PRE3 [Saccharomyces cerevisiae]
 gi|151945075|gb|EDN63326.1| 20S proteasome subunit [Saccharomyces cerevisiae YJM789]
 gi|190409486|gb|EDV12751.1| 20S proteasome subunit [Saccharomyces cerevisiae RM11-1a]
 gi|285812892|tpg|DAA08790.1| TPA: Pre3p [Saccharomyces cerevisiae S288c]
 gi|290771204|emb|CBK33732.1| Pre3p [Saccharomyces cerevisiae EC1118]
 gi|349579189|dbj|GAA24352.1| K7_Pre3p [Saccharomyces cerevisiae Kyokai no. 7]
 gi|392298426|gb|EIW09523.1| Pre3p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 215

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 70/162 (43%), Gaps = 15/162 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK     SG  AD +A+  ++     +Y  Q+    +    A  +   L Y+      + 
Sbjct: 58  DKIWCCRSGSAADTQAIADIVQYHLELYTSQYGTPST--ETAASVFKELCYENKDNLTAG 115

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++ G D++ KG VYT    GS  ++ Y+  GSGST I  + D   +             
Sbjct: 116 IIVAGYDDKNKGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRE------------ 163

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHR 175
             +S+ E VD +K   + A + D  +G  + +VVL   G+ R
Sbjct: 164 -NMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVLTAAGVER 204


>gi|312070446|ref|XP_003138150.1| proteasome A-type and B-type family protein [Loa loa]
          Length = 223

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 14/162 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           ++ V+  SG  AD +A+  ++     +Y     + ++    AQ+  N LY  R     S 
Sbjct: 34  NRMVVCRSGSAADTQAISDIVKYYIEVYSMMEEEDVTVGRSAQIFRNFLYKYRDSLSASV 93

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            V G  D EG G +Y     G   R   ++ GSGST +  FLD+Q KS            
Sbjct: 94  LVAGYDDVEG-GQLYAIPLGGYVTRQRCAASGSGSTFVQGFLDSQWKS------------ 140

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHR 175
             ++  +  ++V    A AT RD  +G  + + V++K G  R
Sbjct: 141 -GMTAEKCKEIVLNAVALATIRDGSSGGVIRLAVIDKTGTQR 181


>gi|145513030|ref|XP_001442426.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409779|emb|CAK75029.1| unnamed protein product [Paramecium tetraurelia]
          Length = 194

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/164 (22%), Positives = 77/164 (46%), Gaps = 18/164 (10%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYK----RFFP 69
           D  +   SG  AD  +  +++   H + +++    M+    A  +  ++Y +    R  P
Sbjct: 40  DHKIFGISGEGADRNSFGEIVHKNHCLIRYKTGGYMNLQETAHFV-RSMYAQAIRSRDGP 98

Query: 70  YYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA 129
           +    +LGG+D++G   +Y  D +GS +++   +QG  +  ++  LDNQ K P+      
Sbjct: 99  HQCNGLLGGVDSDGTPSLYWLDYLGSLQKITRGAQGYANYFLLGLLDNQYK-PN------ 151

Query: 130 QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
                 L++ E ++++K C      R +   +K  + ++ K GI
Sbjct: 152 ------LTKEEGIEIIKKCIKELQTRFLIAQNKFIVKIVTKQGI 189


>gi|256270206|gb|EEU05428.1| Pre3p [Saccharomyces cerevisiae JAY291]
          Length = 216

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 70/162 (43%), Gaps = 15/162 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK     SG  AD +A+  ++     +Y  Q+    S    A +    L Y+      + 
Sbjct: 59  DKIWCCRSGSAADTQAIADIVQYHLELYTSQYGTP-STETAASVFKE-LCYENKDNLTAG 116

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++ G D++ KG VYT    GS  ++ Y+  GSGST I  + D   +             
Sbjct: 117 IIVAGYDDKNKGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRE------------ 164

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHR 175
             +S+ E VD +K   + A + D  +G  + +VVL   G+ R
Sbjct: 165 -NMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVLTAAGVER 205


>gi|330801313|ref|XP_003288673.1| proteasome subunit beta type 3 [Dictyostelium purpureum]
 gi|325081295|gb|EGC34816.1| proteasome subunit beta type 3 [Dictyostelium purpureum]
          Length = 205

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 39/67 (58%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DKC +  SG   D + L + +  RH +Y+ +  + MS   +  L++N LY KRF PY++ 
Sbjct: 47  DKCFIGISGLVTDAQTLHQKIVFRHNLYKLREERDMSPKVVTNLIANMLYEKRFGPYFTE 106

Query: 74  NVLGGLD 80
            ++ GL+
Sbjct: 107 PLICGLE 113


>gi|385805286|ref|YP_005841684.1| 20S proteasome, Alpha and Beta subunits [Fervidicoccus fontis
           Kam940]
 gi|383795149|gb|AFH42232.1| 20S proteasome, Alpha and Beta subunits [Fervidicoccus fontis
           Kam940]
          Length = 199

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 14/154 (9%)

Query: 19  ASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGG 78
            ++G   D + + ++       Y+ +   +MS    A+LLSN LY  R FP Y   +L G
Sbjct: 51  GTAGLMGDTQNIIRIFREEIRYYETEIKSKMSTKSAAKLLSNILYSYRGFPLYGEFILAG 110

Query: 79  LDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSE 138
           +D++ K  +   D  GS     Y + G+G  + +  L+          L  Q+    + E
Sbjct: 111 IDDK-KPTLVVLDPAGSVLEDEYMAIGTGGPVAIGVLEE---------LYQQN----IDE 156

Query: 139 AEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
             A+DL          RD  +G  ++ VV++  G
Sbjct: 157 KTAIDLAIRAVKQGVRRDAMSGGSIDYVVISDRG 190


>gi|448576104|ref|ZP_21642147.1| proteasome subunit beta [Haloferax larsenii JCM 13917]
 gi|445729784|gb|ELZ81378.1| proteasome subunit beta [Haloferax larsenii JCM 13917]
          Length = 243

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 19/150 (12%)

Query: 27  VKALQKL---LAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEG 83
           V A Q L   L A   +Y+ +  + MS   ++ L+ N L    FF      +LGG+D +G
Sbjct: 98  VSAAQSLISNLKAEVRLYEARRGEDMSMQALSTLVGNFLRSGAFFVVQP--ILGGVDEDG 155

Query: 84  KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 143
            G +Y+ D  GS     Y+  GSGS   +  L+ +                 LS  EA  
Sbjct: 156 -GHIYSIDPAGSILEEEYTVTGSGSQYALGVLEREYSD-------------DLSVDEAKQ 201

Query: 144 LVKTCFASATERDIYTGDKLEIVVLNKGGI 173
           +      +A ERD+ +G+ + I V+   G+
Sbjct: 202 VATNAIRAAVERDLASGNGINIAVVTDEGV 231


>gi|365761090|gb|EHN02766.1| Pup3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
 gi|401841875|gb|EJT44194.1| PUP3-like protein [Saccharomyces kudriavzevii IFO 1802]
          Length = 205

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/165 (21%), Positives = 81/165 (49%), Gaps = 15/165 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G   DV  L ++   +  +Y+ +  + +      QL+S++LY +RF PY+   V+ G++
Sbjct: 54  TGLATDVTTLNEMFRYKTNLYKLREERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGIN 113

Query: 81  NE-GKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSE 138
           ++ GK  +  +D +G  +    +   G+ S  +    ++ L  P+   L ++D    +S+
Sbjct: 114 SKSGKPFIAGFDLIGCIDEAKDFIVSGTASDQLFGMCES-LYEPN---LESEDLFETISQ 169

Query: 139 AEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           A           +A +RD  +G    + ++ K  + + Y+++R+D
Sbjct: 170 A---------LLNAADRDALSGWGAAVYIIKKDKVVKRYLKMRQD 205


>gi|330914585|ref|XP_003296699.1| hypothetical protein PTT_06865 [Pyrenophora teres f. teres 0-1]
 gi|311331040|gb|EFQ95206.1| hypothetical protein PTT_06865 [Pyrenophora teres f. teres 0-1]
          Length = 260

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 11/163 (6%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQ-MSCPGMAQLLSNTLYYKR--FFPY 70
           D+ V+   G  +D++ L +LL +  +   +  ++  ++   +   LS  +Y +R  F P 
Sbjct: 79  DEVVVGFGGDVSDMQYLDRLLNSLDIRENYSSSENSLNAKNLHTYLSKVMYNRRSKFDPL 138

Query: 71  YSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQ 130
           ++  ++ G+D E K  + + D +G+       + G G+ L  P L          +LP +
Sbjct: 139 WNHMLIVGMDGEKKPFLASADLLGTTFSSPSLATGFGAHLAQPILRT--------ILPDE 190

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
            AV  ++  +AV+ +K C      RD  + DK  I V+ K G+
Sbjct: 191 AAVENVTREQAVEKIKECMKVLFYRDARSMDKYSIAVVTKDGV 233


>gi|167998460|ref|XP_001751936.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162697034|gb|EDQ83371.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 236

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 14/140 (10%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G  AD +  Q+ L  R  +++  + + +S  G ++LL+NTLY  R    +   ++ G D
Sbjct: 63  AGGAADCQFWQRNLGTRCRLHELANKRHISVTGASKLLANTLYSYRGMGLFMGTMIAGWD 122

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
             G G +Y  D+ G   +    S GSGST     LD   K         QD    +S  E
Sbjct: 123 ETGPG-LYYVDSEGGRVKGTRFSVGSGSTYAYGVLDTVFK---------QD----MSIDE 168

Query: 141 AVDLVKTCFASATERDIYTG 160
           AV+L +     AT RD  +G
Sbjct: 169 AVELARRSIYHATLRDGASG 188


>gi|82704967|ref|XP_726772.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
 gi|23482323|gb|EAA18337.1| 7006-8626 [Plasmodium yoelii yoelii]
          Length = 204

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 73/176 (41%), Gaps = 12/176 (6%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYY-- 71
           D   +  SG   D+++L +LL  R  +YQ +    M+    + +LSN LY  RF PY+  
Sbjct: 35  DHIYVGLSGLATDIQSLYELLRYRVNLYQIRQETDMNIDCFSNMLSNILYSNRFSPYFVN 94

Query: 72  ----SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLL 127
                F V   +D  G         + +Y+ +G   + +       F+ N + +     +
Sbjct: 95  PIVVGFKVNTHIDENGNKINVYEPYLNAYDLIGAKCETN------DFVVNGVSNEQLYGM 148

Query: 128 PAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                +    E    + V  C  SA +RD  +G   E+ VL    I ++ ++ R D
Sbjct: 149 CESMYIKDQDENGLFETVSQCLLSALDRDCLSGWGAEVYVLTPDKIIKKKLKARMD 204


>gi|401626020|gb|EJS43988.1| pup3p [Saccharomyces arboricola H-6]
          Length = 205

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/165 (21%), Positives = 82/165 (49%), Gaps = 15/165 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G  +DV  L ++   +  +Y+ + ++ +      QL+S++LY +RF PY+   V+ G++
Sbjct: 54  TGLASDVTTLNEMFRYKTNLYKLREDRAIEPETFTQLVSSSLYERRFGPYFVGPVVAGIN 113

Query: 81  NE-GKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSE 138
           ++ GK  +  +D +G  +    +   G+ S  +    ++ L  P+   L  +D    +S+
Sbjct: 114 SKSGKPFIAGFDLIGCIDEAKDFIVSGTASDQLFGMCES-LYEPN---LEPEDLFETISQ 169

Query: 139 AEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           A           +A +RD  +G    + ++ K  + + Y+++R+D
Sbjct: 170 A---------LLNAVDRDALSGWGAVVYIIKKDKVVKRYLKMRQD 205


>gi|323448836|gb|EGB04730.1| hypothetical protein AURANDRAFT_32152 [Aureococcus anophagefferens]
          Length = 219

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 70/173 (40%), Gaps = 9/173 (5%)

Query: 9   TSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFF 68
           TS   +   + +SG  AD  +L   L      Y       M     AQ+ S  +Y +R F
Sbjct: 53  TSALGNLAALGTSGCVADCDSLSHDLRMEAERYFWGAEMSMEASVAAQVCSQMMYARRAF 112

Query: 69  PYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLP 128
           PYY+  +L GLD  G G V  +D+ GS       + GS   ++   LD       P    
Sbjct: 113 PYYASLLLCGLDRFGTGRVCVFDSFGSITEGQMVAVGSAQGVLQAVLDRFAPRYFPRFRC 172

Query: 129 AQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELR 181
             DA   L  A         F  A  RD+  G  +++ ++++  I  + + +R
Sbjct: 173 IDDAKEVLLSA---------FKVAARRDVSVGHFVDLTLVSRTEILCDTVLIR 216


>gi|313126409|ref|YP_004036679.1| proteasome subunit beta [Halogeometricum borinquense DSM 11551]
 gi|448286253|ref|ZP_21477487.1| proteasome subunit beta [Halogeometricum borinquense DSM 11551]
 gi|312292774|gb|ADQ67234.1| proteasome endopeptidase complex, beta component [Halogeometricum
           borinquense DSM 11551]
 gi|445575086|gb|ELY29568.1| proteasome subunit beta [Halogeometricum borinquense DSM 11551]
          Length = 243

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 20/164 (12%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G  +  ++L + + A   +Y+ +  + MS   ++ LL N L    F  Y    +LGG D
Sbjct: 95  AGSVSAAQSLIRSIRAEVRLYESRRGEDMSMQALSTLLGNFLRSGAF--YIVQPILGGFD 152

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
           +EG   +Y+ D  GS     Y+  GSGS   +  L+             Q+    LS  E
Sbjct: 153 DEG-AHIYSIDPAGSILEEEYTVTGSGSQYALGVLE-------------QEYSNDLSIEE 198

Query: 141 AVDLVKTCFASATERDIYTGDKLEIVVLNKGGI----HREYMEL 180
           A         SA ERD+ +G+ + + V+ + G+    H+++ ++
Sbjct: 199 AKTTAARAIKSAVERDLASGNGINVCVVTEDGVEITQHKDFEDV 242


>gi|170594089|ref|XP_001901796.1| Proteasome A-type and B-type family protein [Brugia malayi]
 gi|158590740|gb|EDP29355.1| Proteasome A-type and B-type family protein [Brugia malayi]
          Length = 209

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 14/162 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+ V+  SG  AD +A+  ++     +Y     ++++    AQ+  N LY  R     S 
Sbjct: 34  DRMVVCRSGSAADTQAISDIVKYYIEVYSMMEEEEVTVGRSAQIFRNFLYKYRDSLSASV 93

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            V G  D EG G +Y     G   R   ++ G GST +  FLD+Q K       P     
Sbjct: 94  LVAGYDDIEG-GQLYAIPMGGYVTRQRCAASGRGSTFVQGFLDSQWK-------PG---- 141

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHR 175
             ++  +  +LV    A AT RD  +G  + + V++K G  R
Sbjct: 142 --MTAEKCKELVLNAVALATIRDGSSGGVIRLAVIDKTGTKR 181


>gi|326509597|dbj|BAJ87014.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 204

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 44/83 (53%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           K  +  SG  +D + L + L  +H +YQ +  + M     A L+S+ LY KRF PY+   
Sbjct: 48  KLYIGLSGLASDAQTLYQRLVFKHKLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQP 107

Query: 75  VLGGLDNEGKGCVYTYDAVGSYE 97
           ++ GL  + +  + T D +G+ E
Sbjct: 108 IIAGLGQDDEPFICTMDCIGAKE 130


>gi|346469773|gb|AEO34731.1| hypothetical protein [Amblyomma maculatum]
          Length = 204

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 41/84 (48%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +  SG   D   L + L  RH +YQ +  + M     A ++S  LY KRF PY+  
Sbjct: 47  DKLYVGLSGLATDALTLYQRLVFRHKLYQLREERDMKPETFASVVSAILYEKRFGPYFCQ 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYE 97
            V+ GL  +    + T D +G+ E
Sbjct: 107 PVIAGLGEDDVPFICTMDCIGAKE 130


>gi|365981473|ref|XP_003667570.1| hypothetical protein NDAI_0A01690 [Naumovozyma dairenensis CBS 421]
 gi|343766336|emb|CCD22327.1| hypothetical protein NDAI_0A01690 [Naumovozyma dairenensis CBS 421]
          Length = 205

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 82/168 (48%), Gaps = 15/168 (8%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLG 77
           +  +G   DV  L +    +  +Y+ + ++ +      QL+S+TLY KRF PY+   V+ 
Sbjct: 51  LGITGLATDVTTLSETFRYKSNLYELKEDRAIEPETFTQLVSSTLYEKRFGPYFVGPVVA 110

Query: 78  GLDNE-GKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP 135
           G++++ GK  +  +D +G  +    +   G+ S  +    ++ L  P+   L ++D    
Sbjct: 111 GINSKSGKPFIAGFDLIGCIDEAKDFIVSGTASDQLFGMCES-LYEPN---LESEDLFET 166

Query: 136 LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           +S+A           +A +RD  +G    + ++ K  + + ++++R+D
Sbjct: 167 ISQA---------LLNAADRDALSGWGAVVYIIKKDKVIKRHLKMRQD 205


>gi|268554105|ref|XP_002635040.1| C. briggsae CBR-PBS-1 protein [Caenorhabditis briggsae]
          Length = 242

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 72/160 (45%), Gaps = 16/160 (10%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D  V+  SG  AD +A+  +      +Y    NK ++    +Q+    LY  R     S 
Sbjct: 65  DNMVVCRSGSAADTQAIADIAKYHIDVYTMTENKPVTIYRSSQIFRQFLYNYR--EQLSA 122

Query: 74  NVL-GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           +VL  G D+E  G VY     G   R   ++ GSGST +  FLD+Q +   P L      
Sbjct: 123 SVLVAGWDSELGGQVYAIPIGGFVSRQRSTASGSGSTFVQGFLDSQWR---PDLT----- 174

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
              L E +A+  VK     AT RD  +G  + + V++K G
Sbjct: 175 ---LEECKAI--VKQAVGLATFRDGSSGGVVRLAVIDKTG 209


>gi|347826593|emb|CCD42290.1| similar to proteasome subunit beta type-3 [Botryotinia fuckeliana]
          Length = 212

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 82/174 (47%), Gaps = 27/174 (15%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G   DV  +  L   +  +Y+ +  + +S   MA L+S++LY +RF P++   V+ GLD
Sbjct: 55  TGLATDVSTVSDLFRYKVNMYRLREERNISPTTMANLVSSSLYERRFGPFFVSPVVAGLD 114

Query: 81  NE-GKGCVYTYDAVGSYERV------GYSSQ---GSGSTLIMP-FLDNQLKSPSPLLLPA 129
            + GK  +  +D++G  +        G +S    G+   L  P  L++Q++ P       
Sbjct: 115 QKTGKPFICGFDSIGCIDFAKDFIVSGTASDQLFGTCEGLWEPDLLNSQIQGP------- 167

Query: 130 QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           +D    +S+A           +A +RD  +G    + ++ K  + +  ++ R+D
Sbjct: 168 EDLFETISQA---------LLNAVDRDALSGWGAHVYIIEKDKVTKRLLKGRQD 212


>gi|348540002|ref|XP_003457477.1| PREDICTED: proteasome subunit beta type-11-like [Oreochromis
           niloticus]
          Length = 224

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 15/168 (8%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V+ SSG  AD    +++L     +YQ +H  ++S    A+LLS+ L+  +         L
Sbjct: 54  VVTSSGSGADCMLWERILIREIRLYQLRHGHRLSIRATAKLLSSMLHPFKGTEMCVALTL 113

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPL 136
            G D  G   +Y     G+  +    S GSGS      LD +L+               L
Sbjct: 114 CGWDKRGPKLIYVCSD-GARLQGDVFSVGSGSPYAYGVLDRELR-------------WSL 159

Query: 137 SEAEAVDLVKTCFASATERDIYTGDKLEIV-VLNKGGIHREYMELRKD 183
           S+ EA+ L +     AT RD Y+G+ +++  +  +G   R+  +L+++
Sbjct: 160 SKGEAISLAREAVFRATHRDAYSGNNVDLFHITAQGWSQRKREDLKEE 207


>gi|448562307|ref|ZP_21635346.1| proteasome subunit beta [Haloferax prahovense DSM 18310]
 gi|445719511|gb|ELZ71191.1| proteasome subunit beta [Haloferax prahovense DSM 18310]
          Length = 243

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 19/150 (12%)

Query: 27  VKALQKLLA---ARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEG 83
           V A Q L++   A   +Y+ +  + MS   ++ L+ N L    F  Y    +LGG+D  G
Sbjct: 98  VSAAQSLISSLRAEVRLYEARRGEDMSMQALSTLVGNFLRSGGF--YVVQPILGGVDETG 155

Query: 84  KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 143
              +Y+ D  GS     Y+  GSGS   +  L+ + K               LS  EA  
Sbjct: 156 P-HIYSIDPAGSILEEEYTVTGSGSQYALGVLEQEFKD-------------GLSIEEAKQ 201

Query: 144 LVKTCFASATERDIYTGDKLEIVVLNKGGI 173
           +      SA ERD+ +G+ + I V+ + G+
Sbjct: 202 VATKAIRSAVERDLASGNGINIAVVTEDGV 231


>gi|378754521|gb|EHY64552.1| hypothetical protein NERG_02362 [Nematocida sp. 1 ERTm2]
          Length = 204

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 22/176 (12%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            D+ +++ +GF  D + L K L     +++    +++     + LLS  LY KRF P+  
Sbjct: 46  TDRIILSLTGFVPDCQVLYKTLRKHVTMFKLSQQREIEPKEFSSLLSYILYSKRFSPFLI 105

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYE-RVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
             ++ G D E    VYT D +G       +++ G+ S  +    D               
Sbjct: 106 SPLIAGFDRENNPHVYTMDLIGCVSGHDDFATTGTASKSLSGIAD--------------- 150

Query: 132 AVTPLSEAEAVDLVKT---CFASATERDIYTGDKLEIVVLNKGG-IHREYMELRKD 183
            V    + E  DL  T    F +A +R+  +G   + V+L     IHRE ++ R+D
Sbjct: 151 -VLFTEDMEPEDLFTTTMQAFLNAIDRNALSGWGSDAVILTPSKRIHRE-VKTRQD 204


>gi|154308476|ref|XP_001553574.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
          Length = 198

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 82/174 (47%), Gaps = 27/174 (15%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G   DV  +  L   +  +Y+ +  + +S   MA L+S++LY +RF P++   V+ GLD
Sbjct: 41  TGLATDVSTVSDLFRYKVNMYRLREERNISPTTMANLVSSSLYERRFGPFFVSPVVAGLD 100

Query: 81  NE-GKGCVYTYDAVGSYERV------GYSSQ---GSGSTLIMP-FLDNQLKSPSPLLLPA 129
            + GK  +  +D++G  +        G +S    G+   L  P  L++Q++ P       
Sbjct: 101 QKTGKPFICGFDSIGCIDFAKDFIVSGTASDQLFGTCEGLWEPDLLNSQIQGP------- 153

Query: 130 QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           +D    +S+A           +A +RD  +G    + ++ K  + +  ++ R+D
Sbjct: 154 EDLFETISQA---------LLNAVDRDALSGWGAHVYIIEKDKVTKRLLKGRQD 198


>gi|328862302|gb|EGG11403.1| 20S proteasome subunit [Melampsora larici-populina 98AG31]
          Length = 201

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/171 (23%), Positives = 77/171 (45%), Gaps = 14/171 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +   G  +D   L++    R  +Y+ +  + +    MA L+S+TLY KRF PY+  
Sbjct: 44  DKVYIGLPGLASDTVTLRQQFRHRVNMYKMKEERTIEPETMAHLVSSTLYQKRFGPYFVE 103

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            V+ GL+++ +  +   D +G       +   G+ S  +    +  L  P+   L  +D 
Sbjct: 104 PVIAGLNSKNEPFIAATDLIGCINFAKDFVVSGTASDKLFGMAE-ALWEPN---LEPEDL 159

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              +S++           +A +RD Y+G    + ++ K  I +  ++ R D
Sbjct: 160 FETISQS---------LMNAMDRDAYSGWGAVVWIIQKDQIIKRVLKSRMD 201


>gi|315428112|dbj|BAJ49699.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
          Length = 168

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 56/99 (56%), Gaps = 1/99 (1%)

Query: 19  ASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGG 78
           A +G  AD++ + K + A   +Y+ +   + S   +A++LS  L+  R+FPY+   ++GG
Sbjct: 61  ACAGVVADMQNMIKEVTAVVNLYRLEQGVEPSVKTVAKILSWNLFGNRYFPYFMETIVGG 120

Query: 79  LDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDN 117
           +D++G   V   D +GS     Y+  G+G+ + +  ++N
Sbjct: 121 IDSQGP-HVIVLDPLGSMIEDDYAVVGTGAEVAVGVIEN 158


>gi|255712483|ref|XP_002552524.1| KLTH0C06886p [Lachancea thermotolerans]
 gi|238933903|emb|CAR22086.1| KLTH0C06886p [Lachancea thermotolerans CBS 6340]
          Length = 205

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 15/165 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G   DV  L +    +  +Y+ + ++ +      QL+S+TLY KRF PY++  V+ G++
Sbjct: 54  TGLATDVTTLSETFRYKTNMYKLKEDRFIEPETFTQLVSSTLYEKRFGPYFTGPVVAGIN 113

Query: 81  NE-GKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSE 138
           +  GK  +  +D +G  +    +   G+ S  +    ++ L  P+   L  +D    +S+
Sbjct: 114 SRTGKPYISGFDLIGCIDEAKDFVVSGTASEQLFGMCES-LYEPN---LEPEDLFETISQ 169

Query: 139 AEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           A           +A +RD  +G    + ++ K  + + Y++ R+D
Sbjct: 170 A---------LLNAADRDALSGWGAAVYIIKKDKVIKRYLKTRQD 205


>gi|357138383|ref|XP_003570772.1| PREDICTED: proteasome subunit beta type-3-like [Brachypodium
           distachyon]
          Length = 204

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 43/84 (51%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           +K  +  SG   D + L + L  +H +YQ +  + M     A L+S  LY KRF PY+  
Sbjct: 47  EKLYIGLSGLATDAQTLYQRLVFKHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQ 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYE 97
            ++ GL +  +  + T D +G+ E
Sbjct: 107 PIIAGLGDNDQPFICTMDCIGAKE 130


>gi|424814263|ref|ZP_18239441.1| 20S proteasome, beta subunit [Candidatus Nanosalina sp. J07AB43]
 gi|339757879|gb|EGQ43136.1| 20S proteasome, beta subunit [Candidatus Nanosalina sp. J07AB43]
          Length = 216

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 70/151 (46%), Gaps = 16/151 (10%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+  +  +G   D + + +++ ++ L  +    +++S  G   LL+N L+  +  P+ + 
Sbjct: 57  DEIGLTIAGSVGDAQKVVRMMRSQ-LNMKKLETRELSVKGAGTLLANILHANKMMPFMNQ 115

Query: 74  NVLGGLDNEGKGCVYTYDAVGS-YERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            VLGG+  EG+G +Y+ D  G       Y++ GSGS +    L++  +            
Sbjct: 116 FVLGGI-QEGEGILYSLDPAGGLMPHEDYTATGSGSQMAFGVLEDGFEH----------- 163

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKL 163
              +S  E  +L      SA ERD  +G+ +
Sbjct: 164 --GISHEEGKELAMNAVKSAMERDTASGNGI 192


>gi|325092329|gb|EGC45639.1| proteasome component [Ajellomyces capsulatus H88]
          Length = 192

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 77/165 (46%), Gaps = 15/165 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G   DV ++  LL  +  +Y+ +  +Q+S   +A L+S++LY KRF PY+   VL G++
Sbjct: 41  TGLATDVSSVSDLLRYKVNMYRLREERQISPQTLANLISSSLYEKRFGPYFVSPVLAGIN 100

Query: 81  N-EGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSE 138
           +  GK  +  +D++G  +    +   G+ S       D    +   L  P       L  
Sbjct: 101 STTGKPFICGFDSIGCIDFAKDFIVSGTAS-------DQLFGTCEGLWEP------DLGP 147

Query: 139 AEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            +  + +     +A +RD  +G    + ++ K  + +  ++ R+D
Sbjct: 148 DDLFETISQALLNAVDRDALSGWGAHVYIIEKDKVTKRLLKGRQD 192


>gi|374724463|gb|EHR76543.1| proteasome, beta component (T1A subfamily) [uncultured marine group
           II euryarchaeote]
          Length = 208

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/157 (22%), Positives = 73/157 (46%), Gaps = 17/157 (10%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            D   + ++G     ++L + LAA   ++Q +  +QM+  G A   +N L  +   P++ 
Sbjct: 51  GDNLALTTAGLVGHAQSLSRTLAAEVSLFQLRRQQQMTVKGAATFTANILAGR---PHWV 107

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
             ++ G+D+EG G VY+ D+ G      Y + GSGS  +   L++               
Sbjct: 108 QLLIVGVDDEG-GHVYSIDSAGGSIPDSYCATGSGSPYMYGVLEDGFSE----------- 155

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLN 169
              ++  +A+ L      ++ +RD  +G+ +++ V+ 
Sbjct: 156 --GMTRTDALKLAARALHASGQRDAASGNGMDLAVIT 190


>gi|221052302|ref|XP_002257727.1| beta3 proteasome subunit [Plasmodium knowlesi strain H]
 gi|193807558|emb|CAQ38063.1| beta3 proteasome subunit, putative [Plasmodium knowlesi strain H]
          Length = 204

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 14/170 (8%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYY------SFN 74
           SG   D++ L +LL  R  +Y+ +    M     A +LS+ LY  RF PY+       F 
Sbjct: 42  SGLATDIQTLYELLRYRVNLYEIRQETPMDIDCFANMLSSILYANRFSPYFVNPIVVGFR 101

Query: 75  VLGGLDNEGKGCVYTYDA-VGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
           V    D+EGK  + T++  + +Y+ +G   +         F+ N + S     +     +
Sbjct: 102 VKHTFDDEGKK-IRTFEPYLTAYDLIGAKCETK------DFVVNGVTSEQLYGMCESLYI 154

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
               +    + +  C  SA +RD  +G   E+ VL    I ++ ++ R D
Sbjct: 155 KDQDKDGLFETISQCLLSALDRDCLSGWGAEVYVLTPDSIMKKKLKARMD 204


>gi|331245973|ref|XP_003335621.1| proteasome component PUP3 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309314611|gb|EFP91202.1| proteasome component PUP3 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 204

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/171 (21%), Positives = 73/171 (42%), Gaps = 14/171 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +   G   D   L+ +   R  +Y+ +  + +    MA L+S+TLY KRF PY+  
Sbjct: 47  DKMFIGLPGLATDTFTLKNVFRHRVNMYKMKEERVIEPQTMAHLISSTLYQKRFGPYFVE 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            V+ GLD++ +  +   D +G       +   G+ S+ +   +   L  P          
Sbjct: 107 PVVAGLDSKNEPFIAATDLIGCINFAKDFVVSGTASSKLFG-MAEALWEPD--------- 156

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              L+  +  + +     +A +RD Y+G    + ++    + +  ++ R D
Sbjct: 157 ---LAPEDLFETISQTLLNAVDRDAYSGWGAVVWIIEADQVTKRVLKSRMD 204


>gi|258566702|ref|XP_002584095.1| proteasome component PUP3 [Uncinocarpus reesii 1704]
 gi|237905541|gb|EEP79942.1| proteasome component PUP3 [Uncinocarpus reesii 1704]
          Length = 192

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 15/165 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G   DV ++  L+  +  +Y+ +  +Q+S   +A L+S++LY KRF P++   VL G++
Sbjct: 41  TGLATDVSSVSDLMRYKVNLYRLREERQISPQTLANLVSSSLYEKRFGPWFVSPVLAGIN 100

Query: 81  N-EGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSE 138
           +  GK  +  +D++G  +    +   G+ S  +    +  L  P             L  
Sbjct: 101 HTTGKPFICGFDSIGCIDFAKDFIVSGTASDQLFGMCEG-LWEPD------------LGP 147

Query: 139 AEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            E  + V     +A +RD  +G    + ++ K  + +  ++ R+D
Sbjct: 148 EELFETVSQALLNAVDRDALSGWGAHVYIIEKDRVTKRLLKGRQD 192


>gi|357123202|ref|XP_003563301.1| PREDICTED: proteasome subunit beta type-3-like [Brachypodium
           distachyon]
          Length = 204

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 42/83 (50%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           K  +  SG   D + L + L  +H +YQ +  + M     A L+S  LY KRF PY+   
Sbjct: 48  KLYLGLSGLATDAQTLYQRLVFKHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQP 107

Query: 75  VLGGLDNEGKGCVYTYDAVGSYE 97
           ++ GL  + +  + T D +G+ E
Sbjct: 108 IIAGLGEDNEPFICTMDCIGAKE 130


>gi|154279074|ref|XP_001540350.1| proteasome component PUP3 [Ajellomyces capsulatus NAm1]
 gi|150412293|gb|EDN07680.1| proteasome component PUP3 [Ajellomyces capsulatus NAm1]
 gi|225562334|gb|EEH10613.1| proteasome component PUP3 [Ajellomyces capsulatus G186AR]
          Length = 192

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 77/165 (46%), Gaps = 15/165 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G   DV ++  LL  +  +Y+ +  +Q+S   +A L+S++LY KRF PY+   VL G++
Sbjct: 41  TGLATDVSSVSDLLRYKVNMYRLREERQISPQTLANLISSSLYEKRFGPYFVSPVLAGIN 100

Query: 81  N-EGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSE 138
           +  GK  +  +D++G  +    +   G+ S       D    +   L  P       L  
Sbjct: 101 STTGKPFICGFDSIGCIDFAKDFIVSGTAS-------DQLFGTCEGLWEP------DLGP 147

Query: 139 AEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            +  + +     +A +RD  +G    + ++ K  + +  ++ R+D
Sbjct: 148 DDLFETISQALLNAVDRDALSGWGAHVYIIEKDKVTKRLLKGRQD 192


>gi|448591212|ref|ZP_21650891.1| proteasome subunit beta [Haloferax elongans ATCC BAA-1513]
 gi|445733768|gb|ELZ85333.1| proteasome subunit beta [Haloferax elongans ATCC BAA-1513]
          Length = 243

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 19/150 (12%)

Query: 27  VKALQKL---LAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEG 83
           V A Q L   L A   +Y+ +  + MS   ++ L+ N L    FF      +LGG+D +G
Sbjct: 98  VSAAQSLISNLKAEVRLYEARRGEDMSMQALSTLVGNFLRSGAFFVVQP--ILGGVDEDG 155

Query: 84  KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 143
            G +Y+ D  GS     Y+  GSGS   +  L+ +                 L+  EA  
Sbjct: 156 -GHIYSIDPAGSILEEEYTVTGSGSQYALGVLEREYSD-------------DLTVDEAKQ 201

Query: 144 LVKTCFASATERDIYTGDKLEIVVLNKGGI 173
           +      +A ERD+ +G+ + I V+   G+
Sbjct: 202 VATNAIRAAVERDLASGNGINIAVVTDEGV 231


>gi|392562504|gb|EIW55684.1| N-terminal nucleophile aminohydrolase [Trametes versicolor
           FP-101664 SS1]
          Length = 208

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 24/179 (13%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           +D+  +   G   DV  L+++   R  +Y  +  +++     A L+S+TLY KRF PY+ 
Sbjct: 46  SDRIYLGLPGLATDVTTLKEVFRYRVNMYTIKEEREIEPETFAHLVSSTLYEKRFGPYFI 105

Query: 73  FNVLGGLDNEGKGC----VYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLL 127
             V+ GL+    G     +   D +G       +   G+ ST               L  
Sbjct: 106 EPVMAGLEKTPSGAYKPFIAATDLIGCLNFAKDFVVAGTAST--------------KLYG 151

Query: 128 PAQDAVTPLSEAEAVDLVKTC---FASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            A+    P  E E  DL +TC     +A +RD Y+G   E+ ++ K  + +  ++ R D
Sbjct: 152 VAEGLWEPDLEPE--DLFETCAQTLLNAVDRDAYSGWGAEVHLITKDKVIKRTLKGRMD 208


>gi|307109788|gb|EFN58025.1| hypothetical protein CHLNCDRAFT_48590 [Chlorella variabilis]
          Length = 204

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 45/84 (53%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+  +  +G   D + L +  A +H +Y+ +  + +      QL+S TLY +RF PY+  
Sbjct: 47  DQLFIGLAGLGTDAETLSQRFAFKHNLYKLREERDIKPSAFGQLVSATLYERRFGPYFCQ 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYE 97
            V+ GL+ +G   +   D++G+ E
Sbjct: 107 PVIAGLEPDGSPYLCGMDSIGAQE 130


>gi|301110580|ref|XP_002904370.1| proteasome subunit beta type-3, putative [Phytophthora infestans
           T30-4]
 gi|262096496|gb|EEY54548.1| proteasome subunit beta type-3, putative [Phytophthora infestans
           T30-4]
          Length = 204

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/171 (21%), Positives = 74/171 (43%), Gaps = 14/171 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +  +G   DV+++ +LL  +  +Y+    + +    ++ LLSN +Y KRF P++  
Sbjct: 47  DKTFLGLAGLATDVQSVSQLLKFKINMYKMNEERDIKPKTLSALLSNMMYEKRFGPWFVE 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            V+ GL  + K  + + D +G       +   G+    +    ++  K            
Sbjct: 107 PVIAGLTEDNKPFLSSMDCLGCEMMTKDFVVAGTMEEALYGMCESMYKP----------- 155

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              + E +  + +  C  SA  RD  +G    + ++   GI  + ++ R+D
Sbjct: 156 --DMEEEDLFETLSQCLLSACNRDALSGWGAVVHIITPKGITSKKLQSRQD 204


>gi|378726087|gb|EHY52546.1| 20S proteasome subunit beta 7 [Exophiala dermatitidis NIH/UT8656]
          Length = 262

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 13/164 (7%)

Query: 16  CVMASSGFQADVKALQKLLAARHLI--YQHQHNKQMSCPGMAQLLSNTLYYKR--FFPYY 71
            V+   G  +D++ L +LL +  +   Y   +   ++   +   LS  LY +R  F P +
Sbjct: 81  TVIGFGGDVSDMQYLDRLLQSLDIRENYLSSYGHTLNAKNLHTYLSKVLYKRRSEFNPLW 140

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLP-AQ 130
           +  ++ GLD++ K  +   D +G+       + G G+ L  P L          L+P  +
Sbjct: 141 NMILVAGLDDDEKPFLAAADLLGTTFSSPTLATGFGAHLAQPLLRK--------LMPHDE 192

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIH 174
           D+V  ++E  AV+ +K C      RD  + DK  I V+ K G+ 
Sbjct: 193 DSVKDITEEMAVNAIKECMKVLFYRDARSLDKYSIAVVRKDGVQ 236


>gi|45184652|ref|NP_982370.1| AAL172Cp [Ashbya gossypii ATCC 10895]
 gi|44979998|gb|AAS50194.1| AAL172Cp [Ashbya gossypii ATCC 10895]
 gi|374105568|gb|AEY94479.1| FAAL172Cp [Ashbya gossypii FDAG1]
          Length = 215

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 15/162 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+     SG  AD +A+  ++     +Y  Q+ +  S    A L S T+ Y+      + 
Sbjct: 58  DRIWCCRSGSAADTQAVADMVQHYLELYTMQYGEP-SASTAASLFS-TICYENKDHLTAG 115

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++ G D++ KG VY+    GS  +  Y+  GSGST I  + D   +             
Sbjct: 116 IIVAGYDDKNKGEVYSIPLGGSVHKAPYAIAGSGSTFIYGYCDKHFRE------------ 163

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHR 175
             +S+ E +D +K   + A + D  +G  + +VVL + G  R
Sbjct: 164 -DMSKEETIDFMKHSLSQAIKWDGSSGGVIRMVVLTEAGAER 204


>gi|15920692|ref|NP_376361.1| proteasome subunit beta [Sulfolobus tokodaii str. 7]
 gi|74574726|sp|Q975D1.1|PSB2_SULTO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|15621475|dbj|BAB65470.1| proteasome beta subunit [Sulfolobus tokodaii str. 7]
          Length = 207

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 22/169 (13%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQ---HNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           + ++G  AD++ +  LL     IY +      + ++   +A  L+N L + ++ PY    
Sbjct: 56  ITTAGSVADLQFIYDLLKN---IYHYNLITGMRPITIKALATYLANMLSFSKYLPYIVQI 112

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 134
           ++GG+D + +  +Y  D VG      Y++ GSGS   +  ++++ +    L         
Sbjct: 113 LIGGVDEQPR--LYNLDYVGDITEEDYTATGSGSVEAIGVIEDEYRPDMTL--------- 161

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG-IHREYMELRK 182
                EA DL +    S+ +RD YTG  + +  + K G   +EY   RK
Sbjct: 162 ----DEAADLARRAIFSSIKRDPYTGTGVIVSKITKNGHEEKEYYPQRK 206


>gi|145341544|ref|XP_001415866.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144576089|gb|ABO94158.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 246

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 76/172 (44%), Gaps = 21/172 (12%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPGMAQLLSNTLYYK-----RF 67
           D+ +M  SG  AD +AL   +  R+++ QH+    +++       ++N + Y+     R 
Sbjct: 56  DRTIMCRSGSAADTEALAGYV--RNIVSQHEMELDEIADVKTVATIANQIGYQNKGANRG 113

Query: 68  FPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLL 127
               ++ ++GG D      VY   A G+  +  +++ GSGST I  FLD+  +       
Sbjct: 114 RGLSAYTIVGGWDKRRGSQVYACTAGGNMIKERWTTDGSGSTYIWGFLDSGWRE------ 167

Query: 128 PAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYME 179
                   ++  E    V    A A   D  +G  + +  ++  GIHR +++
Sbjct: 168 -------GMTREECEAFVAKAIALAMSVDGSSGGCIRLNAVDASGIHRTFIQ 212


>gi|118576729|ref|YP_876472.1| 20S proteasome, alpha and beta subunit [Cenarchaeum symbiosum A]
 gi|118195250|gb|ABK78168.1| 20S proteasome, alpha and beta subunit [Cenarchaeum symbiosum A]
          Length = 195

 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 18/171 (10%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCP--GMAQLLSNTLYYKRFFPYY 71
           D   +  +G  AD + +  +L  R+    H+  KQ   P   +A+L S   +  R +P+ 
Sbjct: 36  DHAGLTLAGGVADAQNIVDVL--RYHASLHRIRKQGPIPIKSLARLTSLIFHQNRGYPFM 93

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
           +  ++GG D  G   +Y  D  GS E   Y + GSGS +    L+ + ++          
Sbjct: 94  ADILMGGFDAVGP-ALYNIDMFGSVEEKSYVTTGSGSPVAYGTLEEEYRAD--------- 143

Query: 132 AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRK 182
               L+  EA  +      +A  R+I TGD + + V+N  G      E +K
Sbjct: 144 ----LTADEAKGVALRAVKAAITRNIGTGDGINVAVINGNGFELLTREQKK 190


>gi|225680862|gb|EEH19146.1| proteasome subunit beta type-3 [Paracoccidioides brasiliensis Pb03]
 gi|226292563|gb|EEH47983.1| proteasome component PUP3 [Paracoccidioides brasiliensis Pb18]
          Length = 192

 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 79/165 (47%), Gaps = 15/165 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G   DV  +  +L  +  +Y+ +  +Q+S   +A L+S++LY KRF PY+   VL G++
Sbjct: 41  TGLATDVSTVSDVLRFKVNMYRLREERQISPQTLANLVSSSLYEKRFGPYFVSPVLAGIN 100

Query: 81  N-EGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSE 138
           N  G+  +  +D++G  +    +   G+ S  +    +  L  P    L  +D    +S+
Sbjct: 101 NTTGEPFICGFDSIGCIDFAKDFIVSGTASEQLFGTCEG-LWEPD---LGPEDLFETISQ 156

Query: 139 AEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           A           +A +RD  +G    + ++ K  + +  ++ R+D
Sbjct: 157 A---------LLNAVDRDALSGWGAHVYIIEKDKVTKRLLKGRQD 192


>gi|145534101|ref|XP_001452795.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124420494|emb|CAK85398.1| unnamed protein product [Paramecium tetraurelia]
          Length = 194

 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/164 (22%), Positives = 76/164 (46%), Gaps = 18/164 (10%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYK----RFFP 69
           D  +   SG  AD  +  +++   H + +++    M+    A  +  ++Y +    R  P
Sbjct: 40  DHKIFGISGEGADRNSFGEIVHKNHCLIRYKTGGYMNLQETAHFV-RSMYAQAIRSRDGP 98

Query: 70  YYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA 129
           +    +LGG+D++G   +Y  D +GS +++   +QG  +  ++  LDNQ K P+      
Sbjct: 99  HQCNGLLGGVDSDGTPSLYWLDYLGSLQKITRGAQGYANYFLLGLLDNQYK-PN------ 151

Query: 130 QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
                 L + E ++++K C      R +   +K  + ++ K GI
Sbjct: 152 ------LIKEEGIEIIKKCIKELQTRFLIAQNKFIVKIVTKQGI 189


>gi|189193573|ref|XP_001933125.1| proteasome component PRE4 [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187978689|gb|EDU45315.1| proteasome component PRE4 [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 260

 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 77/163 (47%), Gaps = 11/163 (6%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQ-MSCPGMAQLLSNTLYYKR--FFPY 70
           D+ V+   G  +D++ L +LL +  +   +  ++  ++   +   L+  +Y +R  F P 
Sbjct: 79  DEVVVGFGGDVSDMQYLDRLLNSLDIRENYSSSENSLNAKNLHTYLAKVMYNRRSKFDPL 138

Query: 71  YSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQ 130
           ++  ++ G+D E K  + + D +G+       + G G+ L  P L          +LP +
Sbjct: 139 WNHMLIVGMDGEKKPFLASADLLGTTFSSPSLATGFGAHLAQPILRT--------ILPDE 190

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
            AV  ++  +AV+ +K C      RD  + DK  I V+ K G+
Sbjct: 191 AAVENVTREQAVEKIKECMKVLFYRDARSMDKYSIAVVTKDGV 233


>gi|297527490|ref|YP_003669514.1| Proteasome endopeptidase complex [Staphylothermus hellenicus DSM
           12710]
 gi|297256406|gb|ADI32615.1| Proteasome endopeptidase complex [Staphylothermus hellenicus DSM
           12710]
          Length = 210

 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 69/158 (43%), Gaps = 19/158 (12%)

Query: 14  DKCVMASSGFQAD--VKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTL-YYKRFFPY 70
           D   M  SG  AD  + A Q    AR   Y+ +  + +   G+A  LS  L  Y R  PY
Sbjct: 50  DYIAMTISGLVADAEIIAEQARFIARK--YKLELGRPIKVSGLASNLSIILNTYLRASPY 107

Query: 71  YSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQ 130
               +LGG DN G    Y  D  GS     Y + GSGS      L+   +S         
Sbjct: 108 IVQLLLGGYDNNGPHLFYM-DLYGSLSEEKYMATGSGSPTAFGVLEEGYRSD-------- 158

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVL 168
                LS  EA +L     ++AT RD ++G+ ++IVV+
Sbjct: 159 -----LSLEEAKELAFKAVSAATRRDGFSGEGVDIVVI 191


>gi|345004933|ref|YP_004807786.1| proteasome endopeptidase complex subunit beta [halophilic archaeon
           DL31]
 gi|344320559|gb|AEN05413.1| proteasome endopeptidase complex, beta subunit [halophilic archaeon
           DL31]
          Length = 242

 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 19/151 (12%)

Query: 27  VKALQKL---LAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEG 83
           V A Q L   L A   +++ +  K+MS   ++ L  N L    F  Y    +LGG+D+EG
Sbjct: 97  VSAAQNLIETLRAESNLFEVRRGKEMSMQALSTLTGNLLRSGAF--YIVSPILGGVDSEG 154

Query: 84  KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 143
              VY+ DA+G      Y+  GSGS   +  L+ +        L  + A T  ++A    
Sbjct: 155 S-HVYSIDALGGTTEEDYAVSGSGSQFALGVLEQEYDDD----LDIEGAKTVATKA---- 205

Query: 144 LVKTCFASATERDIYTGDKLEIVVLNKGGIH 174
                  SA ERD  +G+ + I V+   G+ 
Sbjct: 206 -----IKSAMERDTASGNGINIAVVTDEGVE 231


>gi|295672716|ref|XP_002796904.1| proteasome component PUP3 [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226282276|gb|EEH37842.1| proteasome component PUP3 [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 206

 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 79/165 (47%), Gaps = 15/165 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G   DV  +  +L  +  +Y+ +  +Q+S   +A L+S++LY KRF PY+   VL G++
Sbjct: 55  TGLATDVSTVSDVLRFKVNMYRLREERQISPQTLANLVSSSLYEKRFGPYFVSPVLAGIN 114

Query: 81  N-EGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSE 138
           N  G+  +  +D++G  +    +   G+ S  +    +  L  P    L  +D    +S+
Sbjct: 115 NTTGEPFICGFDSIGCIDFAKDFIVSGTASEQLFGTCEG-LWEPD---LGPEDLFETISQ 170

Query: 139 AEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           A           +A +RD  +G    + ++ K  + +  ++ R+D
Sbjct: 171 A---------LLNAVDRDALSGWGAHVYIIEKDKVTKRLLKGRQD 206


>gi|440290998|gb|ELP84297.1| proteasome subunit beta type-3, putative [Entamoeba invadens IP1]
          Length = 265

 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/154 (20%), Positives = 68/154 (44%), Gaps = 13/154 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           + C++   G  ADV+ + + +     +Y+ +  + +    +    ++ L+ KRF PYY  
Sbjct: 49  EHCLVGGCGVYADVQTVFEQIKYDANLYKLREGRPIGPSQLVNATAHLLFSKRFNPYYMS 108

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++ G D+ GK    +YD +G+     +++ G+G    M   D+  K             
Sbjct: 109 PIIIGFDDNGKTYCSSYDYIGAPGDYRFAAVGTGCNEAMGVCDSFYKE------------ 156

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVV 167
             +   E V+ +  C  +   RD ++G  +E+ +
Sbjct: 157 -DMEPEELVETIGQCLLAGENRDAFSGWGVELPI 189


>gi|50419453|ref|XP_458253.1| DEHA2C13222p [Debaryomyces hansenii CBS767]
 gi|49653919|emb|CAG86329.1| DEHA2C13222p [Debaryomyces hansenii CBS767]
          Length = 206

 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 82/173 (47%), Gaps = 15/173 (8%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            DK  +  +G   DV  L +    ++ +Y+ +  +++    +A L+S+TLY KRF PY+ 
Sbjct: 47  GDKTFLGLTGLATDVITLSETFRFKNNLYKLREEREIEPTTLANLVSSTLYEKRFGPYFV 106

Query: 73  FNVLGGLDNE-GKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQ 130
             ++ GLD++  K  +  +D +G  +    +   G+ S  +    ++ L  P+   L  +
Sbjct: 107 GPIVAGLDSKTNKPFICGFDLIGCIDFAKDFIVSGTASDQLYGMCES-LYEPN---LEPE 162

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           D    +S++           +A +RD  +G    + ++ K  + +  ++ R+D
Sbjct: 163 DLFETISQS---------LLNAVDRDALSGWGAVVYIVTKDNVTKRVLKTRQD 206


>gi|392299798|gb|EIW10890.1| Pup3p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 205

 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/168 (21%), Positives = 81/168 (48%), Gaps = 15/168 (8%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLG 77
           +  +G   DV  L ++   +  +Y+ +  + +      QL+S++LY +RF PY+   V+ 
Sbjct: 51  LGITGLATDVTTLNEMFRYKTNLYKLKEERTIEPETFTQLVSSSLYERRFGPYFVGPVVA 110

Query: 78  GLDNE-GKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP 135
           G++++ GK  +  +D +G  +    +   G+ S  +    ++ L  P+   L  +D    
Sbjct: 111 GINSKSGKPFIAGFDLIGCIDEAKDFIVSGTASDQLFGMCES-LYEPN---LEPEDLFET 166

Query: 136 LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           +S+A           +A +RD  +G    + ++ K  + + Y+++R+D
Sbjct: 167 ISQA---------LLNAADRDALSGWGAVVYIIKKDEVVKRYLKMRQD 205


>gi|168014771|ref|XP_001759925.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689055|gb|EDQ75429.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 269

 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 14/155 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G  AD +  Q+ L  R  +++  + +++S  G ++LL+NTLY  R        ++ G D
Sbjct: 99  AGGAADCQFWQRNLGTRCRLHELANKRRISVTGASKLLANTLYSYRGMGLSMGTMIAGWD 158

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
             G G  Y  D+ G   +    S GSGST     LD                   +S  E
Sbjct: 159 ETGPGLYYV-DSEGGRVKGTRFSVGSGSTYAYGVLDTGFN-------------WDMSIDE 204

Query: 141 AVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHR 175
           AV+L +     AT RD  +G  + +  +  GG  +
Sbjct: 205 AVELARRSIYHATFRDGASGGVVSVYYVGPGGWKK 239


>gi|323309416|gb|EGA62633.1| Pup3p [Saccharomyces cerevisiae FostersO]
          Length = 191

 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/168 (21%), Positives = 81/168 (48%), Gaps = 15/168 (8%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLG 77
           +  +G   DV  L ++   +  +Y+ +  + +      QL+S++LY +RF PY+   V+ 
Sbjct: 37  LGITGLATDVTTLNEMFRYKTNLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVA 96

Query: 78  GLDNE-GKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP 135
           G++++ GK  +  +D +G  +    +   G+ S  +    ++ L  P+   L  +D    
Sbjct: 97  GINSKSGKPFIAGFDLIGCIDEAKDFIVSGTASDQLFGMCES-LYEPN---LEPEDLFET 152

Query: 136 LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           +S+A           +A +RD  +G    + ++ K  + + Y+++R+D
Sbjct: 153 ISQA---------LLNAADRDALSGWGAVVYIIKKDEVVKRYLKMRQD 191


>gi|3114278|pdb|1RYP|J Chain J, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
           Angstroms Resolution
 gi|3114292|pdb|1RYP|X Chain X, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
           Angstroms Resolution
 gi|11513421|pdb|1G65|I Chain I, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
           Molecular Basis For Selectivity Of
           Alpha,Beta-Epoxyketone Proteasome Inhibitors
 gi|11513435|pdb|1G65|W Chain W, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
           Molecular Basis For Selectivity Of
           Alpha,Beta-Epoxyketone Proteasome Inhibitors
 gi|20150385|pdb|1JD2|I Chain I, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
           Complex: A Non- Covalent Proteasome Inhibitor
 gi|20150392|pdb|1JD2|P Chain P, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
           Complex: A Non- Covalent Proteasome Inhibitor
 gi|93279376|pdb|2F16|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Bortezomib
 gi|93279390|pdb|2F16|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Bortezomib
 gi|99032210|pdb|2FAK|I Chain I, Crystal Structure Of Salinosporamide A In Complex With The
           Yeast 20s Proteasome
 gi|99032224|pdb|2FAK|W Chain W, Crystal Structure Of Salinosporamide A In Complex With The
           Yeast 20s Proteasome
 gi|112490851|pdb|2GPL|I Chain I, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
           Proteasome Inhibitors
 gi|112490865|pdb|2GPL|W Chain W, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
           Proteasome Inhibitors
 gi|190016375|pdb|3D29|I Chain I, Proteasome Inhibition By Fellutamide B
 gi|190016389|pdb|3D29|W Chain W, Proteasome Inhibition By Fellutamide B
 gi|197725329|pdb|3E47|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Homobelactosin C
 gi|197725343|pdb|3E47|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Homobelactosin C
 gi|211939220|pdb|3DY3|I Chain I, Crystal Structure Of Yeast 20s Proteasome In Complex With
           The Epimer Form Of Spirolactacystin
 gi|211939234|pdb|3DY3|W Chain W, Crystal Structure Of Yeast 20s Proteasome In Complex With
           The Epimer Form Of Spirolactacystin
 gi|211939248|pdb|3DY4|I Chain I, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Spirolactacystin
 gi|211939262|pdb|3DY4|W Chain W, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Spirolactacystin
 gi|238828245|pdb|3GPJ|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Syringolin B
 gi|238828259|pdb|3GPJ|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Syringolin B
 gi|258588329|pdb|3GPT|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Slow Substrate Ligand
 gi|258588343|pdb|3GPT|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Slow Substrate Ligand
 gi|258588357|pdb|3GPW|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Irreversible Inhibitor
           Ligand
 gi|258588371|pdb|3GPW|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Irreversible Inhibitor
           Ligand
 gi|258588551|pdb|3HYE|I Chain I, Crystal Structure Of 20s Proteasome In Complex With
           Hydroxylated Salinosporamide
 gi|258588565|pdb|3HYE|W Chain W, Crystal Structure Of 20s Proteasome In Complex With
           Hydroxylated Salinosporamide
 gi|298508231|pdb|1VSY|J Chain J, Proteasome Activator Complex
 gi|298508245|pdb|1VSY|X Chain X, Proteasome Activator Complex
 gi|298508447|pdb|3L5Q|N Chain N, Proteasome Activator Complex
 gi|298508461|pdb|3L5Q|Z Chain Z, Proteasome Activator Complex
 gi|330689389|pdb|3MG4|I Chain I, Structure Of Yeast 20s Proteasome With Compound 1
 gi|330689403|pdb|3MG4|W Chain W, Structure Of Yeast 20s Proteasome With Compound 1
 gi|333361152|pdb|3MG0|I Chain I, Structure Of Yeast 20s Proteasome With Bortezomib
 gi|333361166|pdb|3MG0|W Chain W, Structure Of Yeast 20s Proteasome With Bortezomib
 gi|335892349|pdb|3OKJ|I Chain I, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
           Structure Motif For Proteasome Inhibition
 gi|335892363|pdb|3OKJ|W Chain W, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
           Structure Motif For Proteasome Inhibition
 gi|340780427|pdb|3OEU|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           24
 gi|340780441|pdb|3OEU|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           24
 gi|340780455|pdb|3OEV|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           25
 gi|340780469|pdb|3OEV|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           25
 gi|350610680|pdb|3TDD|I Chain I, Crystal Structure Of Yeast Cp In Complex With Belactosin C
 gi|350610694|pdb|3TDD|W Chain W, Crystal Structure Of Yeast Cp In Complex With Belactosin C
 gi|359545854|pdb|3SHJ|I Chain I, Proteasome In Complex With Hydroxyurea Derivative Hu10
 gi|359545868|pdb|3SHJ|W Chain W, Proteasome In Complex With Hydroxyurea Derivative Hu10
 gi|390980824|pdb|3SDI|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           20
 gi|390980838|pdb|3SDI|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           20
 gi|390980852|pdb|3SDK|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           34
 gi|390980866|pdb|3SDK|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           34
 gi|402550740|pdb|4GK7|I Chain I, Yeast 20s Proteasome In Complex With The
           Syringolin-Glidobactin Chimera
 gi|402550754|pdb|4GK7|W Chain W, Yeast 20s Proteasome In Complex With The
           Syringolin-Glidobactin Chimera
 gi|409973868|pdb|4FZC|I Chain I, 20s Yeast Proteasome In Complex With Cepafungin I
 gi|409973882|pdb|4FZC|W Chain W, 20s Yeast Proteasome In Complex With Cepafungin I
 gi|409973896|pdb|4FZG|I Chain I, 20s Yeast Proteasome In Complex With Glidobactin
 gi|409973910|pdb|4FZG|W Chain W, 20s Yeast Proteasome In Complex With Glidobactin
          Length = 204

 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/168 (21%), Positives = 81/168 (48%), Gaps = 15/168 (8%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLG 77
           +  +G   DV  L ++   +  +Y+ +  + +      QL+S++LY +RF PY+   V+ 
Sbjct: 50  LGITGLATDVTTLNEMFRYKTNLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVA 109

Query: 78  GLDNE-GKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP 135
           G++++ GK  +  +D +G  +    +   G+ S  +    ++ L  P+   L  +D    
Sbjct: 110 GINSKSGKPFIAGFDLIGCIDEAKDFIVSGTASDQLFGMCES-LYEPN---LEPEDLFET 165

Query: 136 LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           +S+A           +A +RD  +G    + ++ K  + + Y+++R+D
Sbjct: 166 ISQA---------LLNAADRDALSGWGAVVYIIKKDEVVKRYLKMRQD 204


>gi|397617693|gb|EJK64564.1| hypothetical protein THAOC_14691, partial [Thalassiosira oceanica]
          Length = 1534

 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 71/160 (44%), Gaps = 14/160 (8%)

Query: 21   SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF-NVLGGL 79
            +G  AD     + L  +  +++ Q+ + MS    +++LSN LY  R     S  +++ G 
Sbjct: 1379 AGGAADCSFWIRFLRQQARLHEVQNKRSMSVARSSRILSNALYQYRGLGDLSVGSMIMGY 1438

Query: 80   DNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEA 139
            D      +Y  D  G+  R    S GSGST  +  LD +L+               ++EA
Sbjct: 1439 DAREGFSIYYVDNTGARIRGEVFSVGSGSTFALGILDTELR-------------YDMTEA 1485

Query: 140  EAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYME 179
            EA+ L       AT RD  +G  + + ++ K G  + Y E
Sbjct: 1486 EAISLGIKAIRHATARDAMSGGYIGVYLITKEGWAKVYSE 1525


>gi|389860540|ref|YP_006362779.1| Proteasome beta subunit [Thermogladius cellulolyticus 1633]
 gi|388525443|gb|AFK50641.1| Proteasome beta subunit [Thermogladius cellulolyticus 1633]
          Length = 206

 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 19/158 (12%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHL--IYQHQHNKQMSCPGMAQLLSNTL-YYKRFFPY 70
           D   M  SG  AD + L     AR++  +Y+  + ++++   ++  +S  L  Y R+ P+
Sbjct: 45  DYAAMTISGLVADAQVLVD--EARYIARLYELDYGRRITLRSLSNYMSLILSAYLRYVPF 102

Query: 71  YSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQ 130
               +LGG+D EG   +Y  D  GS  +  Y+S GSGS +    L+ + +          
Sbjct: 103 IVQLLLGGVDEEGP-SLYYLDLYGSISKEKYASTGSGSPVAYGVLEKEYRK--------- 152

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVL 168
                +S  EA  L      +A  RD ++G+ +++VV+
Sbjct: 153 ----DMSLEEAKHLAFKAVEAALSRDGFSGEGVDVVVI 186


>gi|406868327|gb|EKD21364.1| proteasome subunit beta type-3 [Marssonina brunnea f. sp.
           'multigermtubi' MB_m1]
          Length = 212

 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 78/165 (47%), Gaps = 15/165 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G   DV  +  L   +  +Y+ +  + +S   MA L+S++LY KRF PY+   V+ G+D
Sbjct: 61  TGLATDVSTVSDLFRYKVNMYRLREERNISPSTMANLVSSSLYEKRFGPYFVSPVVAGID 120

Query: 81  NE-GKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSE 138
            + GK  +  +D++G  +    +   G+ S  +    +   +   P L P +D    +S+
Sbjct: 121 QKSGKPFICGFDSIGCIDFAKDFIVGGTASDQLFGTCEGLWE---PDLAP-EDLFETISQ 176

Query: 139 AEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           A           +A +RD  +G    + ++ K  + +  ++ R+D
Sbjct: 177 A---------LLNAVDRDALSGWGAHVYIIEKDKVTKRLLKGRQD 212


>gi|169602118|ref|XP_001794481.1| hypothetical protein SNOG_03937 [Phaeosphaeria nodorum SN15]
 gi|160706087|gb|EAT89142.2| hypothetical protein SNOG_03937 [Phaeosphaeria nodorum SN15]
          Length = 195

 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/165 (22%), Positives = 75/165 (45%), Gaps = 11/165 (6%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G   DV  +  L   +  +Y+ +  + +S   MA L+S++LY KRF PY+   V+ G++
Sbjct: 40  TGLATDVATVSDLFRYKVNMYRLREERNISPQTMANLVSSSLYEKRFGPYFVSPVIAGIN 99

Query: 81  -NEGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSE 138
              GK  +  +D++G  +    +   G+ S       D    +   L  P  D V+    
Sbjct: 100 QTTGKPFICGFDSIGCIDFAKDFIVSGTAS-------DQLFGTCEGLWEP--DLVSSQGP 150

Query: 139 AEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            +  + +     +A +RD  +G    + ++ K  + +  ++ R+D
Sbjct: 151 EDLFETISQALLNAVDRDALSGWGAHVYIIEKDKVTKRLLKGRQD 195


>gi|302595920|sp|A0RXV1.2|PSB2_CENSY RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
          Length = 210

 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 18/171 (10%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCP--GMAQLLSNTLYYKRFFPYY 71
           D   +  +G  AD + +  +L  R+    H+  KQ   P   +A+L S   +  R +P+ 
Sbjct: 51  DHAGLTLAGGVADAQNIVDVL--RYHASLHRIRKQGPIPIKSLARLTSLIFHQNRGYPFM 108

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
           +  ++GG D  G   +Y  D  GS E   Y + GSGS +    L+ + ++          
Sbjct: 109 ADILMGGFDAVGP-ALYNIDMFGSVEEKSYVTTGSGSPVAYGTLEEEYRAD--------- 158

Query: 132 AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRK 182
               L+  EA  +      +A  R+I TGD + + V+N  G      E +K
Sbjct: 159 ----LTADEAKGVALRAVKAAITRNIGTGDGINVAVINGNGFELLTREQKK 205


>gi|398364611|ref|NP_011020.3| proteasome core particle subunit beta 3 [Saccharomyces cerevisiae
           S288c]
 gi|141337|sp|P25451.1|PSB3_YEAST RecName: Full=Proteasome subunit beta type-3; AltName:
           Full=Macropain subunit PUP3; AltName:
           Full=Multicatalytic endopeptidase complex subunit PUP3;
           AltName: Full=Proteasome component PUP3
 gi|11514000|pdb|1G0U|I Chain I, A Gated Channel Into The Proteasome Core Particle
 gi|11514014|pdb|1G0U|W Chain W, A Gated Channel Into The Proteasome Core Particle
 gi|14488814|pdb|1FNT|J Chain J, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|14488828|pdb|1FNT|X Chain X, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|75765708|pdb|1Z7Q|J Chain J, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|75765722|pdb|1Z7Q|X Chain X, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|178847468|pdb|2ZCY|I Chain I, Yeast 20s Proteasome:syringolin A-Complex
 gi|178847482|pdb|2ZCY|W Chain W, Yeast 20s Proteasome:syringolin A-Complex
 gi|178847510|pdb|3BDM|I Chain I, Yeast 20s Proteasome:glidobactin A-Complex
 gi|178847524|pdb|3BDM|W Chain W, Yeast 20s Proteasome:glidobactin A-Complex
 gi|323462944|pdb|3NZJ|I Chain I, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Ligand 2a
 gi|323462958|pdb|3NZJ|W Chain W, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Ligand 2a
 gi|323462972|pdb|3NZW|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With 2b
 gi|323462986|pdb|3NZW|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With 2b
 gi|323463000|pdb|3NZX|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Ligand 2c
 gi|323463014|pdb|3NZX|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Ligand 2c
 gi|333361180|pdb|3MG6|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           6
 gi|333361194|pdb|3MG6|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           6
 gi|333361208|pdb|3MG7|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           8
 gi|333361222|pdb|3MG7|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           8
 gi|333361236|pdb|3MG8|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           16
 gi|333361250|pdb|3MG8|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
           16
 gi|378792249|pdb|3UN4|I Chain I, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
 gi|378792263|pdb|3UN4|W Chain W, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
 gi|378792283|pdb|3UN8|I Chain I, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
 gi|378792297|pdb|3UN8|W Chain W, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
 gi|403071956|pdb|4B4T|3 Chain 3, Near-Atomic Resolution Structural Model Of The Yeast 26s
           Proteasome
 gi|403072200|pdb|4G4S|J Chain J, Structure Of Proteasome-Pba1-Pba2 Complex
 gi|444302347|pdb|4INR|I Chain I, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
           Lu102
 gi|444302361|pdb|4INR|W Chain W, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
           Lu102
 gi|444302375|pdb|4INT|I Chain I, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
           Lu122
 gi|444302389|pdb|4INT|W Chain W, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
           Lu122
 gi|444302403|pdb|4INU|I Chain I, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
           Lu112
 gi|444302417|pdb|4INU|W Chain W, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
           Lu112
 gi|172337|gb|AAA34946.1| ORF1 [Saccharomyces cerevisiae]
 gi|603332|gb|AAB64649.1| Pup3p [Saccharomyces cerevisiae]
 gi|151944812|gb|EDN63071.1| 20S proteasome subunit beta3_sc [Saccharomyces cerevisiae YJM789]
 gi|190405659|gb|EDV08926.1| proteasome component PUP3 [Saccharomyces cerevisiae RM11-1a]
 gi|256271461|gb|EEU06515.1| Pup3p [Saccharomyces cerevisiae JAY291]
 gi|259146019|emb|CAY79279.1| Pup3p [Saccharomyces cerevisiae EC1118]
 gi|285811728|tpg|DAA07756.1| TPA: proteasome core particle subunit beta 3 [Saccharomyces
           cerevisiae S288c]
 gi|323305263|gb|EGA59010.1| Pup3p [Saccharomyces cerevisiae FostersB]
 gi|323333773|gb|EGA75164.1| Pup3p [Saccharomyces cerevisiae AWRI796]
 gi|323337981|gb|EGA79220.1| Pup3p [Saccharomyces cerevisiae Vin13]
 gi|323355291|gb|EGA87116.1| Pup3p [Saccharomyces cerevisiae VL3]
 gi|349577761|dbj|GAA22929.1| K7_Pup3p [Saccharomyces cerevisiae Kyokai no. 7]
 gi|365766114|gb|EHN07615.1| Pup3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 205

 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/168 (21%), Positives = 81/168 (48%), Gaps = 15/168 (8%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLG 77
           +  +G   DV  L ++   +  +Y+ +  + +      QL+S++LY +RF PY+   V+ 
Sbjct: 51  LGITGLATDVTTLNEMFRYKTNLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVA 110

Query: 78  GLDNE-GKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP 135
           G++++ GK  +  +D +G  +    +   G+ S  +    ++ L  P+   L  +D    
Sbjct: 111 GINSKSGKPFIAGFDLIGCIDEAKDFIVSGTASDQLFGMCES-LYEPN---LEPEDLFET 166

Query: 136 LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           +S+A           +A +RD  +G    + ++ K  + + Y+++R+D
Sbjct: 167 ISQA---------LLNAADRDALSGWGAVVYIIKKDEVVKRYLKMRQD 205


>gi|340345703|ref|ZP_08668835.1| Proteasome endopeptidase complex [Candidatus Nitrosoarchaeum
           koreensis MY1]
 gi|339520844|gb|EGP94567.1| Proteasome endopeptidase complex [Candidatus Nitrosoarchaeum
           koreensis MY1]
          Length = 210

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 14/152 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G  AD + +  +L     +++ +    +S   +A+L S   +  R +P+ +  ++GG D
Sbjct: 58  AGGVADAQNIVDILRYHSNLHRVEKQGPISIHSLARLCSLIFHQNRGYPFMADILVGGYD 117

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
             G   ++  D  GS E+  Y + GSGS +    L+ + +S              L+  E
Sbjct: 118 ANGP-ALFNIDMFGSVEQKSYVTTGSGSPVAYGLLEEEYRS-------------DLTVEE 163

Query: 141 AVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
           A  +      +A  R+I TGD + I V++K G
Sbjct: 164 AKKIALRAVKAAIVRNIGTGDGINIAVMDKDG 195


>gi|257053725|ref|YP_003131558.1| Proteasome endopeptidase complex [Halorhabdus utahensis DSM 12940]
 gi|302595737|sp|C7NQ99.1|PSB_HALUD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|256692488|gb|ACV12825.1| Proteasome endopeptidase complex [Halorhabdus utahensis DSM 12940]
          Length = 234

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 18/146 (12%)

Query: 32  KLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN-VLGGLDNEGKGCVYTY 90
           + L +   +Y+ + ++ MS   +A L  N   + R  P+ + + +LGG+D+EG   VYT 
Sbjct: 97  RTLRSEASLYETRRDEPMSINALATLAGN---FARGGPFLAIHPILGGVDDEGS-HVYTI 152

Query: 91  DAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFA 150
           D  G      Y+  GSG  +    ++ + +S              LS  EA +L      
Sbjct: 153 DPAGGVMEDDYAVTGSGMQVAYGTIEGEYES-------------DLSTEEAKELATNAVQ 199

Query: 151 SATERDIYTGDKLEIVVLNKGGIHRE 176
           +A+ERD  +G+ L I  +   G+  E
Sbjct: 200 AASERDTGSGNGLVIAEITDEGVEIE 225


>gi|198426046|ref|XP_002119550.1| PREDICTED: similar to proteasome (prosome, macropain) subunit, beta
           type, 2 [Ciona intestinalis]
          Length = 200

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 67/159 (42%), Gaps = 14/159 (8%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYK-RFFPYYSFNV 75
           +M+ +G   D     + +     +Y+ ++  +MS  GMA     TL    R  PY    +
Sbjct: 43  IMSVTGDSGDSNQFSEYIQKNLQLYKMRNGYEMSTKGMANFTRKTLAEALRKNPYNVNLL 102

Query: 76  LGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP 135
           + G D+     +Y  D + S   V +++ G GS  ++  LD   K               
Sbjct: 103 MAGCDDSSDCSLYFMDYLASSVEVPFAAHGYGSYFVLSLLDRWHKP-------------D 149

Query: 136 LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIH 174
           L+  EAV L++ C     +R I     + I +++K GIH
Sbjct: 150 LTRDEAVILLRKCMEELKKRFIVNLPAVLIRIVDKDGIH 188


>gi|218884599|ref|YP_002428981.1| Proteasome subunit [Desulfurococcus kamchatkensis 1221n]
 gi|302595713|sp|B8D683.1|PSB2_DESK1 RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|218766215|gb|ACL11614.1| Proteasome subunit [Desulfurococcus kamchatkensis 1221n]
          Length = 206

 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 77/172 (44%), Gaps = 19/172 (11%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLI--YQHQHNKQMSCPGMAQLLSNTL-YYKRFFPY 70
           D   +  SG  AD + + +   AR++   Y+ +    +    +A  +S  L  Y R+ P+
Sbjct: 46  DYAALTISGLVADAQYIVE--NARYIAREYEIEMGGPIPIKALASRISLILSVYLRYSPF 103

Query: 71  YSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQ 130
               +LGG D+ G   +Y  D  GS  R  Y + GSGS +    L+   +S         
Sbjct: 104 IVQLLLGGRDSTG-ASLYYMDLYGSVTREKYMATGSGSPVAFGILEKNYRSD-------- 154

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRK 182
                LS  EA  L     +SA  RD ++G+ ++IVV+  G    E + L+K
Sbjct: 155 -----LSLEEAKKLAFNAVSSAIMRDGFSGEGVDIVVIGPGIYSEETIPLKK 201


>gi|374633938|ref|ZP_09706303.1| proteasome endopeptidase complex, archaeal, beta subunit
           [Metallosphaera yellowstonensis MK1]
 gi|373523726|gb|EHP68646.1| proteasome endopeptidase complex, archaeal, beta subunit
           [Metallosphaera yellowstonensis MK1]
          Length = 212

 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 80/166 (48%), Gaps = 22/166 (13%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQH---NKQMSCPGMAQLLSNTLYYKRFFPY 70
           ++  + ++G  AD++ +   L     IY + +   N+ ++   +A  L+N L   ++FPY
Sbjct: 57  ERIGITTAGSVADLQFIYNYLKN---IYHYNYISGNRPVTVKALATYLTNILSQSKYFPY 113

Query: 71  YSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQ 130
               ++GG D + +  ++  D +G      Y + GSGS + M  L++  + PS       
Sbjct: 114 LVQILIGGYDVQPR--LFNLDYLGDMTEETYVATGSGSPVAMGVLEDGYR-PS------- 163

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHRE 176
                ++  EAV+L      SA +RD +TG  + +  + K G H+E
Sbjct: 164 -----MTPDEAVELATRAVLSAIKRDSFTGTGVIVTKITKDG-HQE 203


>gi|448609025|ref|ZP_21660304.1| proteasome beta subunit [Haloferax mucosum ATCC BAA-1512]
 gi|445747402|gb|ELZ98858.1| proteasome beta subunit [Haloferax mucosum ATCC BAA-1512]
          Length = 243

 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 19/150 (12%)

Query: 27  VKALQKLLA---ARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEG 83
           V A Q L++   A   +Y+ +  + MS   ++ L+ N L    F  Y    +LGG+D++G
Sbjct: 98  VSAAQSLISSLRAEVRLYESRRGEDMSMQALSTLVGNFLRTGGF--YIVQPILGGVDDDG 155

Query: 84  KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 143
              +Y+ D  GS     Y+  GSGS   +  L+ +                 LS  EA  
Sbjct: 156 A-HIYSIDPAGSILEEEYTVTGSGSQYALGVLEQEFSD-------------DLSIDEAKQ 201

Query: 144 LVKTCFASATERDIYTGDKLEIVVLNKGGI 173
           +      SA ERD+ +G+ + I V+   G+
Sbjct: 202 VATKAIRSAVERDLASGNGINIAVVTDEGV 231


>gi|354611438|ref|ZP_09029394.1| proteasome endopeptidase complex, beta subunit [Halobacterium sp.
           DL1]
 gi|353196258|gb|EHB61760.1| proteasome endopeptidase complex, beta subunit [Halobacterium sp.
           DL1]
          Length = 243

 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 16/159 (10%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
              ++ SG     +A  + L A   +Y+ +  + MS   ++ + SN L    FF      
Sbjct: 89  NAALSISGSVGGSQAFIRSLRAEANLYEARRGEYMSINALSTMASNLLRGGPFF--LVVP 146

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 134
           +LGG+D EG   VY+ D  GS     Y++QGSG    MP+          L +  Q+   
Sbjct: 147 ILGGVDEEGA-HVYSLDPGGSSMSDKYTAQGSG----MPYA---------LGVLEQEYTD 192

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
            L+  EA  +      SA+ERD  +G+ + I  +   GI
Sbjct: 193 DLTMEEAERVGAQAVQSASERDTASGNGIHITRITADGI 231


>gi|326488821|dbj|BAJ98022.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326512002|dbj|BAJ95982.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 204

 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 42/83 (50%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           K  +  SG  +D + L + L  +H +YQ +  + M     A L+S  LY KRF PY+   
Sbjct: 48  KLYIGLSGLASDAQTLYQRLVFKHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQP 107

Query: 75  VLGGLDNEGKGCVYTYDAVGSYE 97
           ++ GL    +  + T D +G+ E
Sbjct: 108 IIAGLGENDQPFICTMDCIGAKE 130


>gi|407465690|ref|YP_006776572.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
           sp. AR2]
 gi|407048878|gb|AFS83630.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
           sp. AR2]
          Length = 210

 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 14/152 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G  AD + +  +L     +++ +    +S   +A+L S   +  R +P+ +  +LGG D
Sbjct: 58  AGGVADAQNIVDILRYHSNLHRVEKQNSISIHSLARLCSLIFHQNRGYPFMADILLGGYD 117

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
             G   ++  D  GS E   Y + GSGS +    L+ + K               L+  E
Sbjct: 118 ANGP-SLFNVDMFGSVEEKSYVTTGSGSPVAYGLLEEEYKE-------------DLTIEE 163

Query: 141 AVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
           A  +      +A  R+I TGD + I +++K G
Sbjct: 164 AKQVALRAVKAAIVRNIGTGDGINIAIMDKDG 195


>gi|386875364|ref|ZP_10117538.1| proteasome endopeptidase complex, beta subunit [Candidatus
           Nitrosopumilus salaria BD31]
 gi|386806763|gb|EIJ66208.1| proteasome endopeptidase complex, beta subunit [Candidatus
           Nitrosopumilus salaria BD31]
          Length = 210

 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 14/152 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G  AD + +  +L     +++ +    +S   +A+L S   +  R +P+ +  ++GG D
Sbjct: 58  AGGVADAQNIVDILRYHSNLHRVEKQGPISIHSLARLCSLIFHQNRGYPFMADILVGGFD 117

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
             G   ++  D  GS E   Y + GSGS +    L+ + K               L+  E
Sbjct: 118 ANGP-ALFNIDMFGSVEEKSYVTTGSGSPVAYGLLEEEYKK-------------DLTVEE 163

Query: 141 AVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
           A  +      +A  R+I TGD + I V++K G
Sbjct: 164 AKKIALRAVKAAIVRNIGTGDGINIAVMDKDG 195


>gi|389581871|dbj|GAB64592.1| 20S proteasome subunit beta-3 [Plasmodium cynomolgi strain B]
          Length = 204

 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/169 (23%), Positives = 71/169 (42%), Gaps = 12/169 (7%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYY------SFN 74
           SG   D++ L +LL  R  +Y+ +    M     A +LS+ LY  RF PY+       F 
Sbjct: 42  SGLATDIQTLYELLRYRVNLYEIRQESPMDIDCFANMLSSILYANRFSPYFVNPIVVGFR 101

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 134
           V   +D+EGK        + +Y+ +G   + +       F+ N +       +     + 
Sbjct: 102 VKHTIDDEGKKISTFEPYLTAYDLIGAKCETN------DFVVNGVTGEQLYGMCESLYIK 155

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              +    + +  C  SA +RD  +G   E+ VL    I ++ ++ R D
Sbjct: 156 DQDKDGLFETISQCLLSALDRDCLSGWGAEVYVLTPDTIMKKKLKARMD 204


>gi|119175342|ref|XP_001239915.1| conserved hypothetical protein [Coccidioides immitis RS]
 gi|303314835|ref|XP_003067426.1| proteasome component, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240107094|gb|EER25281.1| proteasome component, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|320037775|gb|EFW19712.1| proteasome component PUP3 [Coccidioides posadasii str. Silveira]
 gi|392870109|gb|EAS27268.2| proteasome component PUP3 [Coccidioides immitis RS]
          Length = 206

 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 80/165 (48%), Gaps = 15/165 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G   DV ++  LL  +  +Y+ +  +Q++   +A L+S++LY KRF P++   VL G++
Sbjct: 55  TGLATDVASVSDLLRYKVNLYRLREERQIAPQTLANLVSSSLYEKRFGPWFVSPVLAGIN 114

Query: 81  N-EGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSE 138
           +  GK  +  +D++G  +    +   G+ S  +    +  L  P    L  +D    +S+
Sbjct: 115 HTTGKPFICGFDSIGCIDFAKDFIVSGTASDQLFGMCEG-LWEPD---LGPEDLFETISQ 170

Query: 139 AEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           A           +A +RD  +G    + ++ K  + +  ++ R+D
Sbjct: 171 A---------LLNAVDRDALSGWGAHVYIIEKDKVTKRLLKGRQD 206


>gi|357466571|ref|XP_003603570.1| Proteasome subunit beta type [Medicago truncatula]
 gi|217071334|gb|ACJ84027.1| unknown [Medicago truncatula]
 gi|355492618|gb|AES73821.1| Proteasome subunit beta type [Medicago truncatula]
 gi|388518779|gb|AFK47451.1| unknown [Medicago truncatula]
          Length = 232

 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 26/170 (15%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   +  SG  AD + +   +  R+ +  HQH  Q+  P   ++ +N +   R   Y + 
Sbjct: 52  DNVYVCRSGSAADSQVVSDYV--RYFL--HQHTIQLGQPATVKVAANLV---RLLAYNNK 104

Query: 74  N------VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLL 127
           N      ++GG D    G +Y     G+  +  ++  GSGS+ +  F D   K       
Sbjct: 105 NNLQTGLIVGGWDKYEGGQIYGVPLGGTIVQQPFAIGGSGSSYLYGFFDQAWKDG----- 159

Query: 128 PAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREY 177
                   +++ EA DLVK   + A  RD  +G  +  V++N  G+ R +
Sbjct: 160 --------MTKDEAEDLVKKAVSLAIARDGASGGVVRTVIINSEGVTRNF 201


>gi|260946487|ref|XP_002617541.1| proteasome component PUP3 [Clavispora lusitaniae ATCC 42720]
 gi|238849395|gb|EEQ38859.1| proteasome component PUP3 [Clavispora lusitaniae ATCC 42720]
          Length = 192

 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 83/173 (47%), Gaps = 15/173 (8%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            DK  +  +G   DV  L++    +H +Y+ +  +++    +A L+S++LY KRF PY+ 
Sbjct: 33  GDKTFLGLTGLATDVLTLKEDFRLKHNLYKLREEREIEPRTLANLVSSSLYEKRFGPYFV 92

Query: 73  FNVLGGLDNE-GKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQ 130
             ++ GL+++  K  +  +D +G  +    +   G+ S  +    ++ L  P+   L  +
Sbjct: 93  GPIVAGLESKTNKPFICGFDLIGCIDFAKDFIVSGTASDQLYGMCES-LYEPN---LEPE 148

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           D    +S+A           +A +RD  +G    + ++ K  + +  ++ R+D
Sbjct: 149 DLFETISQA---------LLNAVDRDALSGWGAVVYIVTKDKVVKRVLKTRQD 192


>gi|170030525|ref|XP_001843139.1| proteasome subunit beta type 3 [Culex quinquefasciatus]
 gi|167867380|gb|EDS30763.1| proteasome subunit beta type 3 [Culex quinquefasciatus]
          Length = 205

 Score = 49.7 bits (117), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 35/59 (59%)

Query: 22  GFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           G Q D+  + + L  R  +Y+ + N+QM+    A +LSN LY KRF PY+   V+ GLD
Sbjct: 55  GLQTDILTVHQRLLFRKNLYEVRENRQMTPERFAAMLSNFLYEKRFGPYFIEPVIAGLD 113


>gi|24664391|ref|NP_524076.2| proteasome beta2 subunit [Drosophila melanogaster]
 gi|7294336|gb|AAF49685.1| proteasome beta2 subunit [Drosophila melanogaster]
 gi|15292263|gb|AAK93400.1| LD44234p [Drosophila melanogaster]
 gi|220947342|gb|ACL86214.1| Prosbeta2-PA [synthetic construct]
 gi|220956886|gb|ACL90986.1| Prosbeta2-PA [synthetic construct]
          Length = 272

 Score = 49.7 bits (117), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 19/160 (11%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN-VLGGL 79
           +G  AD +    L++++  +++ Q ++++       +L   L+  R+  + S   VLGG+
Sbjct: 85  AGTAADTEMTTDLISSQLELHRLQTDREVRVVAANTMLKQMLF--RYQGHISAALVLGGV 142

Query: 80  DNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEA 139
           D  G   +Y+    GS +++ Y++ GSGS   M   +++ K               LSE 
Sbjct: 143 DKTGPH-IYSIHPHGSSDKLPYATMGSGSLAAMTVFESRWKPD-------------LSEE 188

Query: 140 EAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYME 179
           E   LV+   AS    D+ +G  +++ V+ KG +  EY+ 
Sbjct: 189 EGKKLVRDAIASGVFNDLGSGSNIDLCVIRKGSV--EYLR 226


>gi|451848859|gb|EMD62164.1| hypothetical protein COCSADRAFT_147652 [Cochliobolus sativus
           ND90Pr]
 gi|451998682|gb|EMD91146.1| hypothetical protein COCHEDRAFT_1225142 [Cochliobolus
           heterostrophus C5]
          Length = 260

 Score = 49.7 bits (117), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 78/164 (47%), Gaps = 11/164 (6%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQ-MSCPGMAQLLSNTLYYKR--FFPY 70
           D+ V+   G  +D++ + +LL +  +   +  ++  ++   +   L+  +Y +R  F P 
Sbjct: 79  DEVVVGFGGDVSDMQYIDRLLNSLDIRENYSSSENSLNAKNLHTYLAKVMYNRRSKFDPL 138

Query: 71  YSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQ 130
           ++  ++ G+D E K  + + D +G+       + G G+ L  P L          +LP +
Sbjct: 139 WNHLLIVGMDGESKPFLASADLLGTTFTSPSLATGFGAHLAQPILRT--------ILPDE 190

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIH 174
            AV  +++ +AV+ +K C      RD  + DK  I V+ K G+ 
Sbjct: 191 AAVENVTKEQAVEKIKECMKVLFYRDARSMDKYSIAVVTKEGVE 234


>gi|195590348|ref|XP_002084908.1| GD14518 [Drosophila simulans]
 gi|194196917|gb|EDX10493.1| GD14518 [Drosophila simulans]
          Length = 272

 Score = 49.7 bits (117), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 19/160 (11%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN-VLGGL 79
           +G  AD +    L++++  +++ Q ++++       +L   L+  R+  + S   VLGG+
Sbjct: 85  AGTAADTEMTTDLISSQLELHRLQTDREVRVVAANTMLKQMLF--RYQGHISAALVLGGV 142

Query: 80  DNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEA 139
           D  G   +Y+    GS +++ Y++ GSGS   M   +++ K               LSE 
Sbjct: 143 DKTGPH-IYSIHPHGSSDKLPYATMGSGSLAAMTVFESRWKPD-------------LSEE 188

Query: 140 EAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYME 179
           E   LV+   AS    D+ +G  +++ V+ KG +  EY+ 
Sbjct: 189 EGKKLVRDAIASGVFNDLGSGSNIDLCVIRKGSV--EYLR 226


>gi|390939089|ref|YP_006402827.1| Proteasome endopeptidase complex [Desulfurococcus fermentans DSM
           16532]
 gi|390192196|gb|AFL67252.1| Proteasome endopeptidase complex [Desulfurococcus fermentans DSM
           16532]
          Length = 207

 Score = 49.7 bits (117), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 77/172 (44%), Gaps = 19/172 (11%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLI--YQHQHNKQMSCPGMAQLLSNTL-YYKRFFPY 70
           D   +  SG  AD + + +   AR++   Y+ +    +    +A  +S  L  Y R+ P+
Sbjct: 47  DYAALTISGLVADAQYIVE--NARYIAREYEIEIGGPIPIKALASRISLILSVYLRYSPF 104

Query: 71  YSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQ 130
               +LGG D+ G   +Y  D  GS  R  Y + GSGS +    L+   +S         
Sbjct: 105 IVQLLLGGRDSTG-ASLYYMDLYGSVTREKYMATGSGSPVAFGILEKNYRSD-------- 155

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRK 182
                LS  EA  L     +SA  RD ++G+ ++IVV+  G    E + L+K
Sbjct: 156 -----LSLEEAKKLAFNAVSSAIMRDGFSGEGVDIVVIGPGIYSEETIPLKK 202


>gi|344299526|gb|EGW29879.1| hypothetical protein SPAPADRAFT_63501 [Spathaspora passalidarum
           NRRL Y-27907]
          Length = 206

 Score = 49.7 bits (117), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/173 (20%), Positives = 79/173 (45%), Gaps = 15/173 (8%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            DKC +  +G   DV  L++    +  +Y+ +  + +    +A L+S+TLY +RF PY+ 
Sbjct: 47  GDKCFLGLTGLATDVLTLKETFRFKTNLYKLREERSIEPETLANLVSSTLYERRFGPYFV 106

Query: 73  FNVLGGLDN-EGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQ 130
             ++ GL + + K  +  +D++G  +    +   G+ S  +    ++  +   P L P Q
Sbjct: 107 SPIVAGLGHKDNKPFICGFDSIGCIDFAKDFIVSGTASDQLYGMCESLYE---PDLEPEQ 163

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                       + +     +A +RD  +G    + ++ K  + +  ++ R+D
Sbjct: 164 ----------LFETISQALLNAVDRDALSGWGAVVYIVTKDKVVKRVLKTRQD 206


>gi|290993280|ref|XP_002679261.1| predicted protein [Naegleria gruberi]
 gi|284092877|gb|EFC46517.1| predicted protein [Naegleria gruberi]
          Length = 205

 Score = 49.7 bits (117), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 77/176 (43%), Gaps = 23/176 (13%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +  +G   DV+ + + L  R  +Y  +  + +     A L+SN LY KRF P++  
Sbjct: 47  DKLFIGLNGLATDVQTVNEKLKFRMNMYNLKEERDIKPSSFANLMSNILYEKRFGPWFIE 106

Query: 74  NVLGGLDN-EGKGCVYTYDAVGSYERVGYSSQGSGSTLIMP-FLDNQLKSPS---PLLLP 128
            V+ GL+  E K  +   D +G+                 P F DN + S +    L   
Sbjct: 107 PVIAGLEGPENKPFICAQDLIGA-----------------PCFTDNFVVSGTCSEALYGM 149

Query: 129 AQDAVTPLSEAEAV-DLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            +    P  E E + +++  C  +A +RD  +G    + V+    I  + +++R+D
Sbjct: 150 CESLYKPDMEPEDLFEVISQCLLAAVDRDCISGWGAVVHVITPDSITTKRLKVRQD 205


>gi|410928748|ref|XP_003977762.1| PREDICTED: proteasome subunit beta type-11-like [Takifugu rubripes]
          Length = 299

 Score = 49.7 bits (117), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 15/168 (8%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V+  SG  AD    +++L     +YQ +H + +S  G A+LLS  L+  +        +L
Sbjct: 127 VVTCSGSGADCMMWRRILTRETRLYQLRHGRCLSIRGTAKLLSFMLHPFKGTEVCVALIL 186

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPL 136
            G D +G   +Y   + G+  +    S GSGS      LD + +               L
Sbjct: 187 CGWDKDGPKLIYVC-SDGARLQGDLFSVGSGSPYAYGVLDREQR-------------WNL 232

Query: 137 SEAEAVDLVKTCFASATERDIYTGDKLEIV-VLNKGGIHREYMELRKD 183
           S+ EA  L +     AT RD Y+G+ +++  + ++G   +E ++L+++
Sbjct: 233 SKEEAFSLAREAVFRATHRDAYSGNNVDLFHITDQGWQKKERVDLKEE 280


>gi|358373507|dbj|GAA90105.1| proteasome component Pre4 [Aspergillus kawachii IFO 4308]
          Length = 260

 Score = 49.7 bits (117), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/163 (21%), Positives = 74/163 (45%), Gaps = 11/163 (6%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQ-HNKQMSCPGMAQLLSNTLYYKR--FFPY 70
           D  ++  SG  +D++ + +LL +  +   +  H   ++   +   LS   Y +R  F P 
Sbjct: 79  DSAIIGFSGDVSDMQYIDRLLESIDIRENYSTHGNTLNAKNLHTYLSKVFYKRRSEFNPL 138

Query: 71  YSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQ 130
           ++  ++ G D + K  + + D +G+     + + G G+ L +P L          L P +
Sbjct: 139 WNHVLVAGFDGDKKPFLSSADLLGTTFSAPHLATGFGAHLAVPILRR--------LFPEE 190

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
             +  +++ EAV  ++ C      RD  + DK  + V+ + G+
Sbjct: 191 RPIESITKDEAVAALRECIKVLWYRDARSLDKYSLAVITEEGV 233


>gi|348667371|gb|EGZ07196.1| hypothetical protein PHYSODRAFT_288866 [Phytophthora sojae]
          Length = 204

 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/171 (20%), Positives = 75/171 (43%), Gaps = 14/171 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +  +G   DV+++ +LL  +  +Y+    +++    ++ LLS+ +Y KRF P++  
Sbjct: 47  DKTFLGLAGLATDVQSVSQLLKFKLNMYKMNEEREIKPKTLSALLSSMMYEKRFGPWFVE 106

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            V+ GL  + K  + + D +G       +   G+    +    ++  K            
Sbjct: 107 PVIAGLTEDNKPFLSSMDCLGCEMMTKDFVVAGTMEEALYGMCESMYKP----------- 155

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              + E +  + +  C  SA  RD  +G    + ++   GI  + ++ R+D
Sbjct: 156 --DMEEEDLFETLSQCLLSACNRDALSGWGAVVHIITPKGITSKKLQSRQD 204


>gi|156848022|ref|XP_001646894.1| hypothetical protein Kpol_2002p109 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117575|gb|EDO19036.1| hypothetical protein Kpol_2002p109 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 215

 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 70/162 (43%), Gaps = 15/162 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK     SG  AD +A+  ++     +Y  Q+ +  +   +A  +  TL Y+      + 
Sbjct: 58  DKIWCCRSGSAADTQAVADIVQYHLEMYTAQYGEPST--EVAASIFKTLCYENKDNLTAG 115

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++ G D   KG VY+    GS  R  Y+  GSGST I  + D   K             
Sbjct: 116 IIVAGYDEANKGQVYSIPLGGSVHRQPYAIAGSGSTFIYGYCDKNFKE------------ 163

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHR 175
             +++ E ++ +K   + A + D  +G  + +VVL K G  R
Sbjct: 164 -DMTKEETIEFMKHSLSQAIKWDGSSGGVIRMVVLTKDGAER 204


>gi|196002749|ref|XP_002111242.1| hypothetical protein TRIADDRAFT_50102 [Trichoplax adhaerens]
 gi|190587193|gb|EDV27246.1| hypothetical protein TRIADDRAFT_50102 [Trichoplax adhaerens]
          Length = 191

 Score = 49.3 bits (116), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 14/172 (8%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           +D   +  SG   DV  +   L  R  +Y  + N++M       L+S+ LY KRF PY+ 
Sbjct: 33  SDHLYIGFSGLATDVTTVSNKLKFRLNMYMLRENREMKPETFMSLVSSLLYEKRFGPYFV 92

Query: 73  FNVLGGLDNEGKGCVYTYDAVG-SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
             V+ GLD   K  V + D +G       +   G+ S  +    ++ L  P    L A D
Sbjct: 93  EPVIAGLDKNAKPFVGSLDLIGCPMITEDFVVSGTASEQLYGMCES-LWEPD---LEADD 148

Query: 132 AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
               +S+A           +A +RD  +G    + V+ K  +  + ++ R D
Sbjct: 149 LFESISQA---------LLNAVDRDCVSGWGGIVYVIEKDKVTEKILKARMD 191


>gi|448585472|ref|ZP_21647865.1| proteasome subunit beta [Haloferax gibbonsii ATCC 33959]
 gi|445726172|gb|ELZ77789.1| proteasome subunit beta [Haloferax gibbonsii ATCC 33959]
          Length = 243

 Score = 49.3 bits (116), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 19/150 (12%)

Query: 27  VKALQKLLA---ARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEG 83
           V A Q L++   A   +Y+ +  + MS   ++ L+ N L    F  Y    +LGG+D  G
Sbjct: 98  VSAAQSLISSLRAEVRLYEARRGEDMSMQALSTLVGNFLRSGGF--YVVQPILGGVDETG 155

Query: 84  KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 143
              +Y+ D  GS     Y+  GSGS   +  L+ + +               LS  EA  
Sbjct: 156 P-HIYSIDPAGSILEEEYTVTGSGSQYALGVLEQEFED-------------GLSIDEAKQ 201

Query: 144 LVKTCFASATERDIYTGDKLEIVVLNKGGI 173
           +      SA ERD+ +G+ + I V+ + G+
Sbjct: 202 VATKAIRSAVERDLASGNGINIAVVTEDGV 231


>gi|356507848|ref|XP_003522675.1| PREDICTED: proteasome subunit beta type-6-like [Glycine max]
          Length = 233

 Score = 49.3 bits (116), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 26/170 (15%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   +  SG  AD + +   +  R+ +  HQH  Q+  P   ++ +N +   R   Y + 
Sbjct: 53  DNVYVCRSGSAADSQIVSDYV--RYFL--HQHTIQLGQPATVKVAANLV---RLLSYNNK 105

Query: 74  N------VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLL 127
           N      ++GG D    G +Y     G+  +  ++  GSGS+ +  F D   K       
Sbjct: 106 NFLETGLIVGGWDKYEGGQIYGVPLGGTIVQQPFAIGGSGSSYLYGFFDQAWKEG----- 160

Query: 128 PAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREY 177
                   +++ EA DLVK   + A  RD  +G  +  V++N  G+ R +
Sbjct: 161 --------MTKDEAEDLVKKAVSLAIARDGASGGVVRTVIINSEGVTRNF 202


>gi|308463733|ref|XP_003094138.1| CRE-PBS-1 protein [Caenorhabditis remanei]
 gi|308248129|gb|EFO92081.1| CRE-PBS-1 protein [Caenorhabditis remanei]
          Length = 239

 Score = 49.3 bits (116), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 16/160 (10%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           +  V+  SG  AD +A+  +      +Y    NK ++    +Q+    LY  R     S 
Sbjct: 62  ENMVVCRSGSAADTQAIADIAKYHIDVYTMTENKPVTIYRSSQIFRQFLYNYR--EQLSA 119

Query: 74  NVL-GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           +VL  G D+E  G VY     G   R   ++ GSGST +  FLD+Q +   P L      
Sbjct: 120 SVLVAGWDSELGGQVYAIPIGGFVSRQRSTASGSGSTFVQGFLDSQWR---PDLT----- 171

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
              L E +A+  VK     AT RD  +G  + + V++K G
Sbjct: 172 ---LDECKAI--VKQAVGLATFRDGSSGGVVRLAVIDKTG 206


>gi|295672926|ref|XP_002797009.1| proteasome component PRE4 [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226282381|gb|EEH37947.1| proteasome component PRE4 [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 260

 Score = 49.3 bits (116), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 72/167 (43%), Gaps = 19/167 (11%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHL-----IYQHQHNKQMSCPGMAQLLSNTLYYKR-- 66
           +  V+   G  +D++ + +LL +  +      Y H  N Q     +   LS  +Y +R  
Sbjct: 79  NNAVLGFGGDVSDMQFIDRLLTSLDIDENYSTYGHTLNAQ----NLHTYLSKLMYRRRSQ 134

Query: 67  FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLL 126
           F P ++  ++ G D  G+  + + D +GS       + G G+ L +P L          L
Sbjct: 135 FNPLWNNILVAGFDTNGQPFLSSVDLLGSTYSAPSLATGFGAHLAIPVLRR--------L 186

Query: 127 LPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
            P    +  ++E EAV  +K C      RD  + D+  I V+ K G+
Sbjct: 187 FPEDRPLEQITEEEAVKALKECLKVLFYRDARSTDRYSIAVVKKDGV 233


>gi|46108636|ref|XP_381376.1| hypothetical protein FG01200.1 [Gibberella zeae PH-1]
 gi|408398899|gb|EKJ78025.1| hypothetical protein FPSE_01813 [Fusarium pseudograminearum CS3096]
          Length = 261

 Score = 49.3 bits (116), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 22/171 (12%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLI-------YQHQHNKQMSCPGMAQLLSNTLYYK 65
           AD  V+   GF  D+  +Q L   RHLI       Y      +++   + + L+  LY +
Sbjct: 78  ADSSVV---GFSGDISDMQYL--DRHLIELSLDEAYTSPDAPRLNAANLHRYLAKLLYRR 132

Query: 66  R--FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPS 123
           R  F P ++  ++ GLD++ K  +   D +GS       + G G+ L  P +        
Sbjct: 133 RSKFDPLWNHILVVGLDDDDKPFLAAADLLGSTYSAPSLATGFGAMLAQPIMRRH----- 187

Query: 124 PLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIH 174
              +P ++A   L +  A++++K C      RD  + D   + V+ K G+ 
Sbjct: 188 ---VPDEEASQNLDKEGAINIIKECMKVLYYRDARSLDSYSMAVVTKEGVE 235


>gi|448540830|ref|ZP_21623751.1| proteasome subunit beta [Haloferax sp. ATCC BAA-646]
 gi|448549222|ref|ZP_21627911.1| proteasome subunit beta [Haloferax sp. ATCC BAA-645]
 gi|448555580|ref|ZP_21631620.1| proteasome subunit beta [Haloferax sp. ATCC BAA-644]
 gi|445708983|gb|ELZ60818.1| proteasome subunit beta [Haloferax sp. ATCC BAA-646]
 gi|445713285|gb|ELZ65063.1| proteasome subunit beta [Haloferax sp. ATCC BAA-645]
 gi|445718325|gb|ELZ70028.1| proteasome subunit beta [Haloferax sp. ATCC BAA-644]
          Length = 243

 Score = 49.3 bits (116), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 19/150 (12%)

Query: 27  VKALQKLLA---ARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEG 83
           V A Q L++   A   +Y+ +  + MS   ++ L+ N L    F  Y    +LGG+D  G
Sbjct: 98  VSAAQSLISSLRAEVRLYEARRGEDMSMQALSTLVGNFLRSGGF--YVVQPILGGVDETG 155

Query: 84  KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 143
              +Y+ D  GS     Y+  GSGS   +  L+ + +               LS  EA  
Sbjct: 156 P-HIYSIDPAGSILEEEYTVTGSGSQYALGVLEQEFED-------------GLSIEEAKG 201

Query: 144 LVKTCFASATERDIYTGDKLEIVVLNKGGI 173
           +      SA ERD+ +G+ + I V+ + G+
Sbjct: 202 VATKAIRSAVERDLASGNGINIAVVTEDGV 231


>gi|159041041|ref|YP_001540293.1| proteasome endopeptidase complex protein [Caldivirga maquilingensis
           IC-167]
 gi|302595700|sp|A8MBW0.1|PSB1_CALMQ RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|157919876|gb|ABW01303.1| Proteasome endopeptidase complex [Caldivirga maquilingensis IC-167]
          Length = 206

 Score = 49.3 bits (116), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 14/157 (8%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           SG  ADV+ +   L    + Y+  H   +    +A   S  ++Y R   Y +  ++GG+D
Sbjct: 60  SGAVADVQMILNELTHLAMNYRITHQAPVPIKTLANYASVVMFYSRPMIYIAHMIIGGVD 119

Query: 81  NEGKGCVYTYDAVGSYERVG-YSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEA 139
           NE    +Y  D  GS+ R   + S GSGS      L++  +               +S  
Sbjct: 120 NEEGPVLYAVDWYGSFTREERFMSTGSGSPTAFGVLEDGYRD-------------DMSLD 166

Query: 140 EAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHRE 176
           +AV L      +A   D  +G+ ++++ + K   +RE
Sbjct: 167 DAVKLATRAVRAAMLHDPGSGEGVDVITITKEAGYRE 203


>gi|448603032|ref|ZP_21656853.1| proteasome subunit beta [Haloferax sulfurifontis ATCC BAA-897]
 gi|448624647|ref|ZP_21670595.1| proteasome subunit beta [Haloferax denitrificans ATCC 35960]
 gi|445746228|gb|ELZ97690.1| proteasome subunit beta [Haloferax sulfurifontis ATCC BAA-897]
 gi|445749852|gb|EMA01294.1| proteasome subunit beta [Haloferax denitrificans ATCC 35960]
          Length = 243

 Score = 49.3 bits (116), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 19/150 (12%)

Query: 27  VKALQKLLA---ARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEG 83
           V A Q L++   A   +Y+ +  + MS   ++ L+ N L    F  Y    +LGG+D  G
Sbjct: 98  VSAAQSLISSLRAEVRLYEARRGEDMSMQALSTLVGNFLRSGGF--YVVQPILGGVDETG 155

Query: 84  KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 143
              +Y+ D  GS     Y+  GSGS   +  L+ + +               LS  EA  
Sbjct: 156 P-HIYSIDPAGSILEEEYTVTGSGSQYALGVLEQEFED-------------GLSIDEAKQ 201

Query: 144 LVKTCFASATERDIYTGDKLEIVVLNKGGI 173
           +      SA ERD+ +G+ + I V+ + G+
Sbjct: 202 VATKAIRSAVERDLASGNGINIAVVTEDGV 231


>gi|225680768|gb|EEH19052.1| proteasome component PRE4 [Paracoccidioides brasiliensis Pb03]
          Length = 260

 Score = 49.3 bits (116), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 19/167 (11%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHL-----IYQHQHNKQMSCPGMAQLLSNTLYYKR-- 66
           +  V+   G  +D++ + +LL +  +      Y H  N Q     +   LS  +Y +R  
Sbjct: 79  NNAVLGFGGDVSDMQFIDRLLTSLDIDENYSTYGHTLNAQ----NLHTYLSKLMYRRRSQ 134

Query: 67  FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLL 126
           F P ++  ++ G D  G+  + + D +GS       + G G+ L +P L          L
Sbjct: 135 FNPLWNNILVAGFDTNGQPFLSSVDLLGSTYSAPSLATGFGAHLAIPVLRR--------L 186

Query: 127 LPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
            P    +  ++E EAV  +K C      RD  + D+  I ++ K G+
Sbjct: 187 FPEDRPLEQITEEEAVKALKECLKVLFYRDARSTDRYSIAIVKKDGV 233


>gi|292655712|ref|YP_003535609.1| proteasome subunit beta [Haloferax volcanii DS2]
 gi|433422417|ref|ZP_20405977.1| proteasome subunit beta [Haloferax sp. BAB2207]
 gi|448289696|ref|ZP_21480860.1| proteasome subunit beta [Haloferax volcanii DS2]
 gi|448570967|ref|ZP_21639478.1| proteasome subunit beta [Haloferax lucentense DSM 14919]
 gi|448595863|ref|ZP_21653310.1| proteasome subunit beta [Haloferax alexandrinus JCM 10717]
 gi|306755975|sp|D4GYZ1.1|PSB_HALVD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|5833210|gb|AAD53406.1|AF126262_1 beta-1 subunit of 20S proteasome [Haloferax volcanii DS2]
 gi|291370914|gb|ADE03141.1| proteasome beta subunit [Haloferax volcanii DS2]
 gi|432198645|gb|ELK54905.1| proteasome subunit beta [Haloferax sp. BAB2207]
 gi|445581429|gb|ELY35787.1| proteasome subunit beta [Haloferax volcanii DS2]
 gi|445722885|gb|ELZ74536.1| proteasome subunit beta [Haloferax lucentense DSM 14919]
 gi|445742317|gb|ELZ93812.1| proteasome subunit beta [Haloferax alexandrinus JCM 10717]
          Length = 243

 Score = 49.3 bits (116), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 19/150 (12%)

Query: 27  VKALQKLLA---ARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEG 83
           V A Q L++   A   +Y+ +  + MS   ++ L+ N L    F  Y    +LGG+D  G
Sbjct: 98  VSAAQSLISSLRAEVRLYEARRGEDMSMQALSTLVGNFLRSGGF--YVVQPILGGVDETG 155

Query: 84  KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVD 143
              +Y+ D  GS     Y+  GSGS   +  L+ + +               LS  EA  
Sbjct: 156 P-HIYSIDPAGSILEEEYTVTGSGSQYALGVLEQEFED-------------GLSIEEAKG 201

Query: 144 LVKTCFASATERDIYTGDKLEIVVLNKGGI 173
           +      SA ERD+ +G+ + I V+ + G+
Sbjct: 202 VATKAIRSAVERDLASGNGINIAVVTEDGV 231


>gi|312378864|gb|EFR25317.1| hypothetical protein AND_09469 [Anopheles darlingi]
          Length = 205

 Score = 49.3 bits (116), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 35/59 (59%)

Query: 22  GFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           G Q D+  + + L  R  +Y+ + N+QM+    A +LSN LY KRF PY+   V+ GLD
Sbjct: 55  GLQTDILTVYQRLIFRKNLYEVRENRQMTPERFAAMLSNFLYEKRFGPYFIEPVIAGLD 113


>gi|453082236|gb|EMF10284.1| N-terminal nucleophile aminohydrolase [Mycosphaerella populorum
           SO2202]
          Length = 206

 Score = 49.3 bits (116), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 79/165 (47%), Gaps = 15/165 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G   DV  + +L   +  +Y+ +  + +S    A L+S++LY KRF P++   V+ GLD
Sbjct: 55  TGLATDVSTVSELFRYKVNMYRLREERDISPRTFANLVSSSLYEKRFGPWFISPVVAGLD 114

Query: 81  NE-GKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSE 138
           ++ GK  +  +D++G  +    +   G+ S  +    +   +   P L P +D    +S+
Sbjct: 115 SKTGKPFICGFDSIGCIDFAKDFIVAGTASDQLFGTCEGLWE---PDLGP-EDLFETMSQ 170

Query: 139 AEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           A           SA +RD  +G    + ++ K  + +  ++ R+D
Sbjct: 171 A---------LLSAVDRDALSGWGAHVYIIEKDKVTKRLLKGRQD 206


>gi|351721274|ref|NP_001236436.1| uncharacterized protein LOC100305513 [Glycine max]
 gi|255625747|gb|ACU13218.1| unknown [Glycine max]
          Length = 233

 Score = 49.3 bits (116), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 26/170 (15%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   +  SG  AD + +   +  R+ +  HQH  Q+  P   ++ +N +   R   Y + 
Sbjct: 53  DNVYVCRSGSAADSQIVSDYV--RYFL--HQHTIQLGQPATVKVAANLV---RLLAYNNK 105

Query: 74  N------VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLL 127
           N      ++GG D    G +Y     G+  +  ++  GSGS+ +  F D   K       
Sbjct: 106 NFLQTGLIVGGWDKYEGGQIYGVPLGGTTVQQPFAIGGSGSSYLYGFFDQAWKEG----- 160

Query: 128 PAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREY 177
                   +++ EA DLVK   + A  RD  +G  +  V++N  G+ R +
Sbjct: 161 --------MTKDEAEDLVKKAVSLAIARDGASGGVVRTVIINSEGVTRNF 202


>gi|384248553|gb|EIE22037.1| N-terminal nucleophile aminohydrolase [Coccomyxa subellipsoidea
           C-169]
          Length = 205

 Score = 49.3 bits (116), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 17/173 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +  +G   D + + + L  RH +Y+ +  + +      +L+S+ LY KRF PY+  
Sbjct: 47  DKLFIGLAGLGTDAQTMHQKLKFRHNLYKLREERNIKPSTFGELVSSMLYEKRFGPYFVS 106

Query: 74  NVLGGL-DNEGKGCVYTYDAVGSYERVG-YSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
            V+ GL D      +   D +G+ E    +   G+              +P  L    + 
Sbjct: 107 PVIAGLEDKTNVPYICGMDTIGAIETANDFMVAGT--------------APDSLYGMCES 152

Query: 132 AVTPLSEAEAV-DLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
              P  E E + + V  C  S  +RD  +G    + V+ K  +    ++ R D
Sbjct: 153 MFRPDMEPEELFETVTQCLMSGADRDALSGWGAIVYVITKDAVVARTLKGRMD 205


>gi|156036470|ref|XP_001586346.1| hypothetical protein SS1G_12924 [Sclerotinia sclerotiorum 1980]
 gi|154698329|gb|EDN98067.1| hypothetical protein SS1G_12924 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 206

 Score = 49.3 bits (116), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 78/165 (47%), Gaps = 15/165 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G   DV  +  L   +  +Y+ +  + +S   MA L+S++LY +RF P++   V+ GLD
Sbjct: 55  TGLATDVSTVSDLFRYKVNMYRLREERNISPTTMANLVSSSLYERRFGPFFVSPVIAGLD 114

Query: 81  NE-GKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSE 138
            + GK  +  +D++G  +    +   G+ S  +    +   +   P L P +D    +S+
Sbjct: 115 QKTGKPFICGFDSIGCIDFAKDFIVSGTASDQLFGTCEGLWE---PDLGP-EDLFETISQ 170

Query: 139 AEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           A           +A +RD  +G    + ++ K  + +  ++ R+D
Sbjct: 171 A---------LLNAVDRDALSGWGAHVYIIEKDKVTKRLLKGRQD 206


>gi|345320946|ref|XP_003430367.1| PREDICTED: proteasome subunit beta type-1-like, partial
           [Ornithorhynchus anatinus]
          Length = 72

 Score = 49.3 bits (116), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 6/74 (8%)

Query: 110 LIMPFLDNQLKSPSPLLLPAQDAV-TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVL 168
           ++ P LDNQ+   +      Q+    PL+  +A+ LVK  F SA ERD+YTGD L+I ++
Sbjct: 1   MLQPMLDNQIGFKN-----MQNVEHVPLTLGKALQLVKDVFISAAERDVYTGDALKICIV 55

Query: 169 NKGGIHREYMELRK 182
            K  I  E + L +
Sbjct: 56  TKDCIQEETISLSE 69


>gi|126465836|ref|YP_001040945.1| 20S proteasome subunits A/B [Staphylothermus marinus F1]
 gi|302595723|sp|A3DN27.1|PSB2_STAMF RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|126014659|gb|ABN70037.1| 20S proteasome, A and B subunits [Staphylothermus marinus F1]
          Length = 208

 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 70/158 (44%), Gaps = 19/158 (12%)

Query: 14  DKCVMASSGFQAD--VKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTL-YYKRFFPY 70
           D   M  SG  AD  + A Q    AR   Y+ +  + +    +A  LS  L  Y R  PY
Sbjct: 48  DYIAMTISGLVADAEIIAEQARFIARK--YKLELGRPIKVSALASNLSIILNAYLRMSPY 105

Query: 71  YSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQ 130
               +LGG D+ G    Y  D  GS     Y + GSGS      L+ + +S         
Sbjct: 106 IVQLLLGGYDDNGPHLFYI-DLFGSLSEEKYMATGSGSPTAFGVLEEEYRSD-------- 156

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVL 168
                LS  EA +L     ++AT+RD ++G+ ++IVV+
Sbjct: 157 -----LSLDEAKELAFKAVSAATKRDGFSGEGVDIVVI 189


>gi|240281173|gb|EER44676.1| proteasome component PUP3 [Ajellomyces capsulatus H143]
          Length = 140

 Score = 48.9 bits (115), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 1/78 (1%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G   DV ++  LL  +  +Y+ +  +Q+S   +A L+S++LY KRF PY+   VL G++
Sbjct: 41  TGLATDVSSVSDLLRYKVNMYRLREERQISPQTLANLISSSLYEKRFGPYFVSPVLAGIN 100

Query: 81  N-EGKGCVYTYDAVGSYE 97
           +  GK  +  +D++G  +
Sbjct: 101 STTGKPFICGFDSIGCID 118


>gi|50311275|ref|XP_455662.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644798|emb|CAG98370.1| KLLA0F12936p [Kluyveromyces lactis]
          Length = 215

 Score = 48.9 bits (115), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 15/162 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK     SG  AD +A+  ++     +Y  Q+ +  +   +A  +  TL Y+      + 
Sbjct: 58  DKIWCCRSGSAADTQAVADIVQYHLELYTSQYGEPTT--KVAASIFKTLCYENKDHLTAG 115

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++ G D + KG VY+    GS  +  YS  GSGS  I  + D   K             
Sbjct: 116 IIVAGYDEKNKGEVYSIPLGGSVHKQSYSIAGSGSAFIYGYCDKNYKE------------ 163

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHR 175
             +++ E ++ VK   + A + D  +G  + +VVL   G+ R
Sbjct: 164 -DMTKEETIEFVKHSLSQAIKWDGSSGGVIRMVVLTAEGVER 204


>gi|194758868|ref|XP_001961680.1| GF14807 [Drosophila ananassae]
 gi|190615377|gb|EDV30901.1| GF14807 [Drosophila ananassae]
          Length = 308

 Score = 48.9 bits (115), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 69/167 (41%), Gaps = 18/167 (10%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G  AD     ++L     +Y+ +H ++M     A+ L+N  Y  R        +L G  
Sbjct: 117 AGGAADCSYWDRVLTREVRLYELRHKERMPVKSAARFLANIAYQYRGMGLSMSIILAGWS 176

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
           +EG   VY  DA G        S GSG    +  LD + +               +S+ +
Sbjct: 177 DEGPSLVYV-DADGLSVPGKLFSAGSGGECALGLLDTEYR-------------YKMSDEK 222

Query: 141 AVDLVKTCFASATERDIYTGDKLEIVVLNKGGIH----REYMELRKD 183
           A DL       A+ RD+YTG  +    L+K G      ++  ELR+D
Sbjct: 223 AFDLAFRSIYHASSRDVYTGGVVSCYHLDKKGWRLVAAKDSEELRED 269


>gi|58395630|ref|XP_321394.2| AGAP001697-PA [Anopheles gambiae str. PEST]
 gi|347966404|ref|XP_003435908.1| AGAP001697-PB [Anopheles gambiae str. PEST]
 gi|55233656|gb|EAA00889.2| AGAP001697-PA [Anopheles gambiae str. PEST]
 gi|333470074|gb|EGK97505.1| AGAP001697-PB [Anopheles gambiae str. PEST]
          Length = 205

 Score = 48.9 bits (115), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 35/59 (59%)

Query: 22  GFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           G Q D+  + + L  R  +Y+ + N+QM+    A +LSN LY KRF PY+   V+ GLD
Sbjct: 55  GLQTDILTVYQRLLFRKNLYEVRENRQMTPERFAAMLSNFLYEKRFGPYFIEPVIAGLD 113


>gi|393794893|ref|ZP_10378257.1| proteasome endopeptidase complex protein [Candidatus
           Nitrosoarchaeum limnia BG20]
          Length = 210

 Score = 48.9 bits (115), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 14/152 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G  AD + +  +L     +++ +    +S   +A+L S   +  R +P+ +  ++GG D
Sbjct: 58  AGGVADAQNIVDILRYHSNLHRVEKQGPISIHSLARLCSLIFHQNRGYPFMADILVGGYD 117

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
             G   ++  D  GS E+  Y + GSGS +    L+ + +               L+  E
Sbjct: 118 ANGP-ALFNIDMFGSVEKKSYVTTGSGSPVAYGLLEEEYRP-------------DLTVEE 163

Query: 141 AVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
           A  +      +A  R+I TGD + I V++K G
Sbjct: 164 AKKIALRAVKAAIVRNIGTGDGINIAVMDKDG 195


>gi|329766105|ref|ZP_08257664.1| proteasome endopeptidase complex [Candidatus Nitrosoarchaeum limnia
           SFB1]
 gi|329137376|gb|EGG41653.1| proteasome endopeptidase complex [Candidatus Nitrosoarchaeum limnia
           SFB1]
          Length = 167

 Score = 48.9 bits (115), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 14/152 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G  AD + +  +L     +++ +    +S   +A+L S   +  R +P+ +  ++GG D
Sbjct: 15  AGGVADAQNIVDILRYHSNLHRVEKQGPISIHSLARLCSLIFHQNRGYPFMADILVGGYD 74

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
             G   ++  D  GS E+  Y + GSGS +    L+ + +               L+  E
Sbjct: 75  ANGP-ALFNIDMFGSVEKKSYVTTGSGSPVAYGLLEEEYRP-------------DLTVEE 120

Query: 141 AVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
           A  +      +A  R+I TGD + I V++K G
Sbjct: 121 AKKVALRAVKAAIVRNIGTGDGINIAVMDKDG 152


>gi|226292461|gb|EEH47881.1| proteasome component Pre4 [Paracoccidioides brasiliensis Pb18]
          Length = 260

 Score = 48.9 bits (115), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 67/164 (40%), Gaps = 26/164 (15%)

Query: 22  GFQADVKALQKLLAARHL----------IYQHQHNKQMSCPGMAQLLSNTLYYKR--FFP 69
           GF  DV  +Q     RHL           Y H  N Q     +   LS  +Y +R  F P
Sbjct: 84  GFGGDVSDMQ--FIDRHLNSLDIDENYSTYGHTLNAQ----NLHTYLSKLMYRRRSQFNP 137

Query: 70  YYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA 129
            ++  ++ G D  G+  + + D +GS       + G G+ L +P L          L P 
Sbjct: 138 LWNNILVAGFDTNGQPFLSSVDLLGSTYSAPSLATGFGAHLAIPVLRR--------LFPE 189

Query: 130 QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
              +  ++E EAV  +K C      RD  + D+  I ++ K G+
Sbjct: 190 DRPLEQITEEEAVKALKECLKVLFYRDARSTDRYSIAIVKKDGV 233


>gi|190348459|gb|EDK40915.2| hypothetical protein PGUG_05013 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 205

 Score = 48.9 bits (115), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 37/164 (22%), Positives = 77/164 (46%), Gaps = 14/164 (8%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G   DV  L++    ++ +Y+ +  ++M    +A L+S +LY +RF PY+   ++ GL 
Sbjct: 55  TGLATDVITLREDFRLKNNLYKLREEREMEPKTLANLVSTSLYERRFGPYFVSPIVAGLG 114

Query: 81  NEGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEA 139
             G+  +  +D++G  +    +   G+ S  +    ++ L  P+   L  +D    +S+A
Sbjct: 115 KGGQPFICGFDSIGCIDFAKDFIVSGTASDQLYGTCES-LYEPN---LEPEDLFETISQA 170

Query: 140 EAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                      +A +RD  +G    + V+ K  + R  +  R+D
Sbjct: 171 ---------LLNAVDRDALSGWGAVVYVVTKEKVVRRVLRTRQD 205


>gi|330039045|ref|XP_003239771.1| 26S proteasome SU [Cryptomonas paramecium]
 gi|327206696|gb|AEA38873.1| 26S proteasome SU [Cryptomonas paramecium]
          Length = 201

 Score = 48.9 bits (115), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 36/170 (21%), Positives = 77/170 (45%), Gaps = 14/170 (8%)

Query: 15  KCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN 74
           K ++  +G   D+ ++++ L  +  ++  + N  +    +  +LSN LY KRF P +  N
Sbjct: 45  KVIIGMTGLFGDISSVKQDLEYKMSLHSFEKNLSVQFFNICNILSNLLYQKRFCPLFLEN 104

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLL-PAQDAV 133
           ++ GLD E +  + + D +G       SS  S +  I+   +  L     +   P  D  
Sbjct: 105 IVCGLDEEFEPTITSMDILG-------SSVFSSNFAIVGTCNQNLYGLCEMFWKPGLDF- 156

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                 E  +++  C  +A+ R+  +G    + +++  GI  + ++ + D
Sbjct: 157 -----TELFEIIVHCLITASNRNCLSGWGCMVKIMSPNGIVTKIIKTKVD 201


>gi|302828808|ref|XP_002945971.1| hypothetical protein VOLCADRAFT_102928 [Volvox carteri f.
           nagariensis]
 gi|300268786|gb|EFJ52966.1| hypothetical protein VOLCADRAFT_102928 [Volvox carteri f.
           nagariensis]
          Length = 223

 Score = 48.9 bits (115), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 65/168 (38%), Gaps = 18/168 (10%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQ--HNKQMSCPGMAQLLSNTLYYKRFFPYY 71
           D      SG  AD +A+   +  +H I QHQ      ++    A L+    Y  +     
Sbjct: 54  DNVYTLRSGSAADTQAIAGYV--QHFIAQHQAEEGDHVTVKTAANLVKMMAYNNKDIMQA 111

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
              ++ G D  G G VY+    G+     +S  GSGST I  F D   +           
Sbjct: 112 GL-IVAGFDKYGGGQVYSISLGGTITATPFSMSGSGSTYINGFCDKYWRE---------- 160

Query: 132 AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYME 179
               +SE EA+D V      A   D  +G  +  V +   G  R++++
Sbjct: 161 ---NMSEEEAMDFVTRALRYAMTWDASSGGCIRTVTITAAGTKRQFIQ 205


>gi|254578806|ref|XP_002495389.1| ZYRO0B10142p [Zygosaccharomyces rouxii]
 gi|238938279|emb|CAR26456.1| ZYRO0B10142p [Zygosaccharomyces rouxii]
          Length = 215

 Score = 48.9 bits (115), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 15/162 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK     SG  AD +A+  ++     +Y  Q+ +  +    A  +   L Y+      + 
Sbjct: 58  DKVWCCRSGSAADTQAVADIVQYYLDLYTAQYGEPSTRTAAA--IFQQLCYENKDALTAG 115

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            ++ G D + +G VY+    GS  +  Y+  GSGST I  + D   K             
Sbjct: 116 IIVAGYDEKNQGEVYSIPIGGSLHKQKYAIAGSGSTFIYGYCDKNYKD------------ 163

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHR 175
             +++ E VD +K   + A + D  +G  + +VVL K G+ R
Sbjct: 164 -GMTKDETVDFIKHSLSQAIKWDGSSGGVIRMVVLTKNGVER 204


>gi|114326385|ref|NP_001041550.1| proteasome subunit beta type-8 precursor [Canis lupus familiaris]
 gi|62900679|sp|Q5W416.1|PSB8_CANFA RecName: Full=Proteasome subunit beta type-8; AltName:
           Full=Proteasome subunit beta-5i; Flags: Precursor
 gi|55162804|emb|CAH63452.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
           multifunctional protease 7) [Canis lupus familiaris]
          Length = 276

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 21/172 (12%)

Query: 8   LTSCRADKCVMAS-------SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSN 60
           ++S R +K +  +       SG  AD +  ++LLA    +Y  ++ +++S    ++LLSN
Sbjct: 98  ISSSRVNKVIEINPSLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSN 157

Query: 61  TLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK 120
            +Y  R       +++ G D +G G  Y  D  G+       S GSGST     +D+  +
Sbjct: 158 MVYQYRGMDLSMGSMICGWDKKGPGLYYV-DQNGTRLSGNMFSTGSGSTYAYGVMDSGYQ 216

Query: 121 SPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
            PS            LS  EA +L +     AT RD Y+G  + +  + + G
Sbjct: 217 -PS------------LSPEEAYELGRRAITYATHRDSYSGGIINMYHMKEDG 255


>gi|195327662|ref|XP_002030537.1| GM25498 [Drosophila sechellia]
 gi|194119480|gb|EDW41523.1| GM25498 [Drosophila sechellia]
          Length = 272

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 77/160 (48%), Gaps = 19/160 (11%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN-VLGGL 79
           +G  AD +    L++++  +++ Q ++++       +L   L+  R+  + S   VLGG+
Sbjct: 85  AGTAADTEMTTDLISSQLELHRLQTDREVRVVAANTMLKQMLF--RYQGHISAALVLGGV 142

Query: 80  DNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEA 139
           D  G   +Y+    GS +++ Y++ GSGS   M   +++ +               LSE 
Sbjct: 143 DKTGPH-IYSIHPHGSSDKLPYATMGSGSLAAMTVFESRWRPD-------------LSEE 188

Query: 140 EAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYME 179
           E   LV+   AS    D+ +G  +++ V+ KG +  EY+ 
Sbjct: 189 EGKKLVRDAIASGVFNDLGSGSNIDLCVIRKGSV--EYLR 226


>gi|303313742|ref|XP_003066880.1| proteasome component, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240106547|gb|EER24735.1| proteasome component, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|320032577|gb|EFW14529.1| proteasome component Pre4 [Coccidioides posadasii str. Silveira]
          Length = 261

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 20/169 (11%)

Query: 22  GFQADVKALQ---KLLAARHLI--YQHQHNKQMSCPGMAQLLSNTLYYKR--FFPYYSFN 74
           GF  DV  +Q   +LL +  +   Y       ++   +   LS  LY +R  F P ++  
Sbjct: 84  GFGGDVSDMQYIDRLLNSLDIRENYSSYGQHTLNAKNLHTYLSKMLYRRRSEFNPLWNHI 143

Query: 75  VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVT 134
           ++ G D +GK  + + D +G+       + G G+ L +P L          L P    + 
Sbjct: 144 LVAGFDQDGKPFLSSADLLGTTFSAPSLATGFGAHLAIPILRR--------LFPEGTPIE 195

Query: 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            +++ +AV  +K C      RD  + DK  I V+ K G+     EL++D
Sbjct: 196 SITKEQAVSALKECMKVLYYRDARSLDKYSIAVITKDGV-----ELKED 239


>gi|406862538|gb|EKD15588.1| proteasome component PRE4 [Marssonina brunnea f. sp.
           'multigermtubi' MB_m1]
          Length = 260

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 80/174 (45%), Gaps = 16/174 (9%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQH-QHNKQMSCPGMAQLLSNTLYYKR--FFP 69
           AD  V+   G  +D++ L +LL +  +   +      ++   +   L+   Y +R  F P
Sbjct: 78  ADTTVVGFGGDVSDMQYLDRLLNSLDIDEAYGPAGHTLNAKNLHTYLTKVFYKRRSDFNP 137

Query: 70  YYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPA 129
            ++  ++ GLD E K  + + D +G+       + G G+ L  P L          + P 
Sbjct: 138 LWNQVLVAGLDEESKPFLASTDLLGTAFSSPSLATGFGAHLAQPLLRK--------VAPD 189

Query: 130 QDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           ++A + LS+ +A++ VK        RD  + DK  I V++K GI     EL++D
Sbjct: 190 EEAASKLSQEQALEAVKESMKVLFYRDARSLDKYSIAVVSKAGI-----ELKED 238


>gi|308812780|ref|XP_003083697.1| 20S proteasome beta 4 subunit (ISS) [Ostreococcus tauri]
 gi|116055578|emb|CAL58246.1| 20S proteasome beta 4 subunit (ISS) [Ostreococcus tauri]
          Length = 767

 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 15/158 (9%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYK-RFFPYYSFNV 75
           +MA+SG + D  A  + +AA   +Y+ ++  ++     A    N L    R  PY    +
Sbjct: 43  IMATSGPRGDCVAFAEYVAANVRLYRLKYQHELDVKATAHYARNELATALRKGPYQVNAL 102

Query: 76  LGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP 135
           L G+D  G   +Y  D + +  RV     G G    +   D                V  
Sbjct: 103 LAGVDANGPE-LYFMDYLATCHRVNTGGHGYGGMFCLSLFDKHW-------------VPN 148

Query: 136 LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
           +S A+A++LV  C A   ER +    +  + +++K G+
Sbjct: 149 MSRAQAMELVDLCVAEVCERLVTAPTEYLVKIVDKKGV 186


>gi|1708781|emb|CAA66313.1| LMP7-like protein [Botryllus schlosseri]
          Length = 257

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 14/152 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G  AD    +++LA +  IY+ ++ +++S    +++L+N +Y  +        ++ G D
Sbjct: 102 AGGAADCMFWERVLAKQCRIYELRNKERISVAAASKILANMVYNYKGMGLSMGTMICGWD 161

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
             G G  Y  D+ G   +    S GSGST     +D+  +               LS AE
Sbjct: 162 KHGPGLFYV-DSDGQRLKGNMFSVGSGSTYAYGVMDSGYR-------------YDLSVAE 207

Query: 141 AVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
           A+DL K     AT RD Y+G  + +  + + G
Sbjct: 208 ALDLGKRSIYHATHRDAYSGGVVNLYHMKETG 239


>gi|301624549|ref|XP_002941563.1| PREDICTED: proteasome subunit beta type-11-like [Xenopus (Silurana)
           tropicalis]
          Length = 277

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 62/160 (38%), Gaps = 13/160 (8%)

Query: 20  SSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGL 79
           +SG  AD +   + LA    IYQ ++    S  G A++LS  +   R     +   L G 
Sbjct: 104 TSGSSADCQLFGRALARECRIYQLRNGYMPSVRGAAKMLSMIMMPFRGMKVCAAFTLCGW 163

Query: 80  DNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEA 139
           D  G    Y Y+           S GSGS      +D+  +               + E 
Sbjct: 164 DRNGPCICYVYNDGTRISSSNVISVGSGSPYAYSIIDDGYR-------------VGMGEE 210

Query: 140 EAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYME 179
           EA  L +     A  RD Y+G  +++  + +GG  R+  E
Sbjct: 211 EARKLARRAVCHAGRRDAYSGGSVDVYWIREGGCERDARE 250


>gi|367011527|ref|XP_003680264.1| hypothetical protein TDEL_0C01640 [Torulaspora delbrueckii]
 gi|359747923|emb|CCE91053.1| hypothetical protein TDEL_0C01640 [Torulaspora delbrueckii]
          Length = 205

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 80/168 (47%), Gaps = 15/168 (8%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLG 77
           +  +G   DV  L +    +  +Y+ + ++ +      QL+S+TLY +RF PY+   V+ 
Sbjct: 51  LGITGLATDVTTLSETFRYKTNLYKLREDRPIEPETFTQLVSSTLYERRFGPYFVGPVVA 110

Query: 78  GLDNEG-KGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP 135
           G++++  K  +  +D +G  +    +   G+ S  +    ++ L  P+   L A+D    
Sbjct: 111 GINSKTEKPFIAGFDLIGCIDEAKDFIVSGTASDQLFGMCES-LYEPN---LEAEDLFET 166

Query: 136 LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           +S+A           +A +RD  +G    + ++ K  + + Y++ R+D
Sbjct: 167 ISQA---------LLNAADRDALSGWGAVVYIIKKDKVVKRYLKTRQD 205


>gi|350630870|gb|EHA19242.1| hypothetical protein ASPNIDRAFT_43045 [Aspergillus niger ATCC 1015]
          Length = 260

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/163 (21%), Positives = 74/163 (45%), Gaps = 11/163 (6%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQ-HNKQMSCPGMAQLLSNTLYYKR--FFPY 70
           D  ++  SG  +D++ + +LL +  +   +  H   ++   +   LS   Y +R  F P 
Sbjct: 79  DSAIIGFSGDVSDMQYIDRLLESIDIRENYSTHGNTLNAKNLHTYLSKVFYKRRSEFNPL 138

Query: 71  YSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQ 130
           ++  ++ G D + K  + + D +G+     + + G G+ L +P L          L P +
Sbjct: 139 WNHILVAGFDGDKKPFLSSADLLGTTFSAPHLATGFGAHLAVPILRR--------LFPEE 190

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
             +  +++ EAV  ++ C      RD  + DK  + V+ + G+
Sbjct: 191 RPLESITKDEAVAALRECIKVLWYRDARSLDKYSLAVITEEGV 233


>gi|298711226|emb|CBJ32446.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 204

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/83 (26%), Positives = 44/83 (53%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            DK ++   G   DV  +++LL  R  +Y+ +  +++     + L+S+ LY KRF PY+ 
Sbjct: 46  GDKLMVGLPGLATDVITMKELLTFRLNLYRLREEREIKPETFSALMSHILYQKRFGPYFV 105

Query: 73  FNVLGGLDNEGKGCVYTYDAVGS 95
             ++ GL  +    +  +D +G+
Sbjct: 106 EPIVAGLKEDNTPFISAFDLIGA 128


>gi|145255853|ref|XP_001399121.1| proteasome subunit beta type-4 [Aspergillus niger CBS 513.88]
 gi|134084718|emb|CAK43375.1| unnamed protein product [Aspergillus niger]
          Length = 260

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/163 (21%), Positives = 74/163 (45%), Gaps = 11/163 (6%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQ-HNKQMSCPGMAQLLSNTLYYKR--FFPY 70
           D  ++  SG  +D++ + +LL +  +   +  H   ++   +   LS   Y +R  F P 
Sbjct: 79  DSAIIGFSGDVSDMQYIDRLLESIDIRENYSTHGNTLNAKNLHTYLSKVFYKRRSEFNPL 138

Query: 71  YSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQ 130
           ++  ++ G D + K  + + D +G+     + + G G+ L +P L          L P +
Sbjct: 139 WNHILVAGFDGDKKPFLSSADLLGTTFSAPHLATGFGAHLAVPILRR--------LFPEE 190

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
             +  +++ EAV  ++ C      RD  + DK  + V+ + G+
Sbjct: 191 RPLESITKDEAVAALRECIKVLWYRDARSLDKYSLAVITEEGV 233


>gi|341897914|gb|EGT53849.1| CBN-PBS-1 protein [Caenorhabditis brenneri]
          Length = 239

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 71/160 (44%), Gaps = 16/160 (10%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           +  V+  SG  AD +A+  +      +Y    NK ++    +Q+    LY  R     S 
Sbjct: 62  ENMVVCRSGSAADTQAIADIAKYHIDVYTMTENKPVTIYRSSQIFRQFLYNYR--EQLSA 119

Query: 74  NVL-GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
           +VL  G D E  G VY     G   R   ++ GSGST +  FLD+Q +   P L      
Sbjct: 120 SVLVAGWDAELGGQVYAIPIGGFVSRQRSTASGSGSTFVQGFLDSQWR---PDLT----- 171

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
              L E +A+  VK     AT RD  +G  + + V++K G
Sbjct: 172 ---LDECKAI--VKQAVGLATFRDGSSGGVVRLAVIDKTG 206


>gi|115466298|ref|NP_001056748.1| Os06g0139900 [Oryza sativa Japonica Group]
 gi|55296478|dbj|BAD68674.1| putative beta 1 subunit of 20S proteasome [Oryza sativa Japonica
           Group]
 gi|113594788|dbj|BAF18662.1| Os06g0139900 [Oryza sativa Japonica Group]
 gi|125553981|gb|EAY99586.1| hypothetical protein OsI_21564 [Oryza sativa Indica Group]
 gi|125595991|gb|EAZ35771.1| hypothetical protein OsJ_20062 [Oryza sativa Japonica Group]
 gi|215679027|dbj|BAG96457.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 246

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 26/170 (15%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   +  SG  AD + + + +  R+ +  HQH  Q+  P   ++ +N +   R   Y + 
Sbjct: 64  DNVYVCRSGSAADTQVISEYV--RYFL--HQHTIQLGQPATVKVAANLI---RLLAYQNK 116

Query: 74  NVL------GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLL 127
           N+L      GG D    G +++    G+  R  ++  GSGS+ +   LD++ K       
Sbjct: 117 NMLQAGMIVGGWDKYEGGQIFSVPLGGTILRQPFAIGGSGSSYLYGLLDHEWKE------ 170

Query: 128 PAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREY 177
                   +S+ EA   V    + A  RD  +G  +  V +N  G+ R++
Sbjct: 171 -------GMSQEEAEKFVVKVVSLAIARDGASGGVVRTVTINADGVSRKF 213


>gi|448727988|ref|ZP_21710328.1| proteasome beta subunit [Halococcus morrhuae DSM 1307]
 gi|445788654|gb|EMA39360.1| proteasome beta subunit [Halococcus morrhuae DSM 1307]
          Length = 225

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 16/153 (10%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           SG  +  ++L + L A   +Y+ + +  MS   +A + +N L    F       VLGG+D
Sbjct: 77  SGSVSAAQSLVESLRAEVRLYETRRDTTMSLNALANVTANRLRSGNFQIVQP--VLGGVD 134

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
           +EG   VY+    GS     Y++ GSGS   +  L+ +    + +     DA T  + A 
Sbjct: 135 DEGA-HVYSIGPGGSVMEETYAASGSGSPFALGVLEGEYDEEASV----DDARTTAARA- 188

Query: 141 AVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
                     SATERD  +G+ L +  + + G+
Sbjct: 189 --------VQSATERDTASGNGLSLATITEEGV 213


>gi|425781832|gb|EKV19776.1| hypothetical protein PDIG_01170 [Penicillium digitatum PHI26]
 gi|425782962|gb|EKV20840.1| hypothetical protein PDIP_12490 [Penicillium digitatum Pd1]
          Length = 206

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 78/165 (47%), Gaps = 15/165 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G   DV  +  L   +  +Y+ +  + ++   +A L+S++LY KRF PY+   VL G++
Sbjct: 55  TGLATDVNTVSDLFRYKVNMYRLREERDIAPQTLANLVSSSLYEKRFGPYFVSPVLAGIN 114

Query: 81  -NEGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSE 138
              GK  +  +D++G  +    +   G+ S  +    +   +   P L P +D    +S+
Sbjct: 115 PTTGKPFICGFDSIGCIDFAKDFIVSGTASDQLFGTCEGLWE---PDLAP-EDLFETISQ 170

Query: 139 AEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           A           SA +RD  +G   ++ ++ K  + +  ++ R+D
Sbjct: 171 A---------LLSAVDRDALSGWGAQVYIIEKDKVTQRLLKGRQD 206


>gi|383127955|gb|AFG44635.1| hypothetical protein CL406Contig2_01, partial [Pinus taeda]
          Length = 86

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 36/69 (52%)

Query: 14 DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
          DK  +  SG   DV+ L +  A RH +YQ +  + M     A L+S  LY KRF PY+  
Sbjct: 18 DKLYVGLSGLATDVQTLYQRFAFRHKLYQLREERNMRPETFASLVSALLYEKRFGPYFCQ 77

Query: 74 NVLGGLDNE 82
           V+ GL  +
Sbjct: 78 PVIAGLGED 86


>gi|388508100|gb|AFK42116.1| unknown [Lotus japonicus]
          Length = 233

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 26/170 (15%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   +  SG  AD + +   +  R+ +  HQH  Q+  P   ++ +N +   R   Y + 
Sbjct: 53  DNVYVCRSGSAADSQVVSDYV--RYFL--HQHTIQLGQPATVKVAANLV---RLLSYNNK 105

Query: 74  N------VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLL 127
           N      ++GG D    G ++     G+  +  ++  GSGS+ +  F D   K       
Sbjct: 106 NFLETGLIVGGWDKYEGGQIFGVPLGGTIVQQPFAIGGSGSSYLYGFFDQAWKDG----- 160

Query: 128 PAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREY 177
                   +++ EA DLVK   + A  RD  +G  +  V++N  G+ R +
Sbjct: 161 --------MTKDEAEDLVKKAVSLAIARDGASGGVVRTVIINSEGVTRNF 202


>gi|224090541|ref|XP_002309021.1| predicted protein [Populus trichocarpa]
 gi|222854997|gb|EEE92544.1| predicted protein [Populus trichocarpa]
          Length = 237

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 26/170 (15%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   +  SG  AD + +   +  R+ +  HQH  Q+  P   ++ +N +   R   Y + 
Sbjct: 55  DNVYLCRSGSAADSQTVSDYV--RYFL--HQHTIQLGQPATVKVAANLV---RLLSYSNK 107

Query: 74  N------VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLL 127
           N      ++GG D    G +Y     G+   + ++  GSGST +  F D   K       
Sbjct: 108 NMLQTGMIIGGWDKYEGGKIYGVPLGGTLLELPFTIGGSGSTYLYGFFDQAWKE------ 161

Query: 128 PAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREY 177
                   +++ EA  LV    + A  RD  +G  +  V +N  G+ R+Y
Sbjct: 162 -------GMTQEEAEQLVVKAVSLAIARDGASGGVVRTVTINSEGVTRKY 204


>gi|154278908|ref|XP_001540267.1| proteasome component Pre4 [Ajellomyces capsulatus NAm1]
 gi|150412210|gb|EDN07597.1| proteasome component Pre4 [Ajellomyces capsulatus NAm1]
          Length = 260

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 73/172 (42%), Gaps = 22/172 (12%)

Query: 22  GFQADVKALQKL--------LAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKR--FFPYY 71
           GF  DV  +Q +        +   +  Y H  N Q     +   LS  +Y +R  F P +
Sbjct: 84  GFGGDVSDMQYIDRVLNFLSIEENYSTYGHSLNAQ----NLHTYLSKMMYRRRSEFNPLW 139

Query: 72  SFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
           +  ++ G D+E K  + + D +G+     + + G G+ L +P L          L P + 
Sbjct: 140 NVILVAGFDSEEKPFLSSVDLLGNTYSAPHLATGFGAHLAIPVLRR--------LFPEEV 191

Query: 132 AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
            +  + E +AV  +K C      RD  + D+  I V+ K G+  +  E  +D
Sbjct: 192 PLENVQEEQAVRSLKECMKVLFYRDARSTDRYSIAVVKKDGVEMKENERLED 243


>gi|341897730|gb|EGT53665.1| hypothetical protein CAEBREN_01834 [Caenorhabditis brenneri]
          Length = 204

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/172 (22%), Positives = 82/172 (47%), Gaps = 16/172 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +  +GFQ+D + + + +  R  +Y+ + N+++    +++++SN  Y  RF  Y++ 
Sbjct: 47  DKVYVGLAGFQSDARTVLEKIMFRKNLYELRENRRIKPQVLSEMISNLAYQHRFGSYFTE 106

Query: 74  NVLGGLDNEGKGCVYTYDAVG--SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
            ++ GLD+  K  +   D +G  S  R  + + G+G   ++   +N  +     + P + 
Sbjct: 107 PLVAGLDDTNKPYICCMDTIGCVSAPR-DFVAVGTGQEYLLGVCENFWREN---MKPEE- 161

Query: 132 AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
               L EA A  ++     S  ERD  +G    +  + K  ++   ++ R D
Sbjct: 162 ----LFEATAQSIL-----SCLERDAASGWGAVVYTITKDKVNVSTIKARMD 204


>gi|258614012|ref|NP_542945.2| proteasome subunit beta type-8 [Rattus norvegicus]
 gi|84028246|sp|P28064.3|PSB8_RAT RecName: Full=Proteasome subunit beta type-8; AltName:
           Full=Macropain subunit C13; AltName: Full=Multicatalytic
           endopeptidase complex subunit C13; AltName:
           Full=Proteasome component C13; AltName: Full=Proteasome
           subunit beta-5i; Flags: Precursor
 gi|46237562|emb|CAE83942.1| proteasome (prosome, macropain) subunit, beta type, 8 [Rattus
           norvegicus]
 gi|149043357|gb|EDL96808.1| proteosome (prosome, macropain) subunit, beta type 8, isoform CRA_a
           [Rattus norvegicus]
          Length = 276

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 14/152 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           SG  AD +  ++LLA    +Y  ++ +++S    ++LLSN +   R       +++ G D
Sbjct: 118 SGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYRGMGLSMGSMICGWD 177

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
            +G G  Y  D  G+       S GSG+T     +D+  +         QD    LS  E
Sbjct: 178 KKGPGLYYV-DDNGTRLSGQMFSTGSGNTYAYGVMDSGYR---------QD----LSPEE 223

Query: 141 AVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
           A DL +     AT RD Y+G  + +  + K G
Sbjct: 224 AYDLARRAIVYATHRDSYSGGVVNMYHMKKDG 255


>gi|225192937|dbj|BAH29707.1| proteasome subunit, beta type 8 [Oryzias latipes]
          Length = 250

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 14/140 (10%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           SG  AD K  ++LLA    +Y+ ++N ++S    ++LL N +   R       +++ G D
Sbjct: 115 SGSAADCKYWERLLAKECRLYRLRNNHRISVAAASKLLCNMMLGYRGMGLSVGSMICGWD 174

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
            EG G +Y  DA G+       S GSGS      LD+  K               ++  E
Sbjct: 175 KEGPG-IYYVDANGNRLSGRMFSTGSGSNYAYGVLDSGYKE-------------DMTVEE 220

Query: 141 AVDLVKTCFASATERDIYTG 160
           A +L +     AT RD Y+G
Sbjct: 221 AYELGRRGIVHATHRDSYSG 240


>gi|27450761|gb|AAO14683.1|AF508264_1 beta 3 subunit of 20S proteasome [Pyrocystis lunula]
          Length = 214

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/160 (20%), Positives = 69/160 (43%), Gaps = 14/160 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D+  +  +G   DV+ + +LL  R  ++  +  + M    +  L+S+ LY KRF PY++ 
Sbjct: 49  DQTFVGIAGLATDVQTMAQLLDFRIKLFSLREERTMQPQTVGNLISSILYEKRFGPYFTE 108

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDA 132
            V+ GLD +    +  +D +G+  +   +   G+ S  +    ++  +            
Sbjct: 109 PVVAGLDKDHNPFLCAFDFIGAMSKAQDFVVSGTSSEQLFGVCESFWRP----------- 157

Query: 133 VTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
              +++ E  + +  C  SA +RD      L    + + G
Sbjct: 158 --KMNKDELFETLAQCLLSAVDRDCLALHDLAFSAVPRAG 195


>gi|219115922|ref|XP_002178756.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217409523|gb|EEC49454.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 199

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 67/157 (42%), Gaps = 14/157 (8%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYK-RFFPYYSFNVL 76
           M  SG   D+    + +A    +Y+  ++ ++S    A      L    R  P+    +L
Sbjct: 44  MGVSGPNCDMVNFCEFVAKNIKLYELSNDIKLSTHAQANFARGELATALRKGPFQVNTLL 103

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPL 136
           GG DN+    +Y  D + + ++V Y SQG  S   +  +D + +               L
Sbjct: 104 GGFDNKVGASLYYLDYMAALQKVNYGSQGYASNFCLSIMDKEYRD-------------DL 150

Query: 137 SEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
           +EA+AV +V+ C      R + +     I V++K G+
Sbjct: 151 NEADAVKIVEQCIHELHTRFLISQKNFIIKVVDKDGV 187


>gi|190347256|gb|EDK39498.2| hypothetical protein PGUG_03596 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 217

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 68/158 (43%), Gaps = 16/158 (10%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQ--HNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGG 78
           SG  AD +A+  ++     IY  Q  H+++ +    A +    L YK      +  +  G
Sbjct: 65  SGSAADTQAIADIVKYYMQIYTSQLPHDEKPTTQIAANIFQE-LCYKNKDNLTAGIICAG 123

Query: 79  LDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSE 138
            D + KG VY+    GS  +  Y+  GSGST I  + +   K               + +
Sbjct: 124 YDEKNKGTVYSIPIGGSIHQQEYAIAGSGSTFIYGWCNENYKK-------------DMEK 170

Query: 139 AEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHRE 176
            E V  +KT  + A + D  +G  + +VVL   G+ R+
Sbjct: 171 DECVSFIKTALSEAIKWDGSSGGVIRMVVLTADGVERK 208


>gi|66356810|ref|XP_625583.1| Pre2p/proteasome subunit beta type 5; NTN hydrolase fold
           [Cryptosporidium parvum Iowa II]
 gi|46226580|gb|EAK87568.1| Pre2p/proteasome subunit beta type 5; NTN hydrolase fold
           [Cryptosporidium parvum Iowa II]
          Length = 290

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 14/153 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G  AD    +++L+    +Y+ ++ +++S  G +++++N  ++ R +   +  ++ G D
Sbjct: 125 AGGAADCSYWERVLSKLCRLYELRNGERISVAGASKMITNIFFHYRAYDLSAGIMIAGFD 184

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
            +G    Y  D  GS  +    S GSGS      LD+  +               L++ E
Sbjct: 185 KDGPHLYYV-DNEGSRVKDCKFSVGSGSLYAYGVLDSGYR-------------YDLTDEE 230

Query: 141 AVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
           A+DL K     AT RD  +G  + +  +NK G+
Sbjct: 231 AIDLGKRAIVIATNRDGGSGGLVRVYQINKNGV 263


>gi|195494432|ref|XP_002094837.1| GE22042 [Drosophila yakuba]
 gi|194180938|gb|EDW94549.1| GE22042 [Drosophila yakuba]
          Length = 272

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 77/160 (48%), Gaps = 19/160 (11%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFN-VLGGL 79
           +G  AD +    L++++  +++ Q ++++       +L   L+  R+  + S   VLGG+
Sbjct: 85  AGTAADTEMTTDLISSQLELHRLQTDREVRVVAANVMLKQMLF--RYQGHISAALVLGGV 142

Query: 80  DNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEA 139
           D  G   +Y+    GS +++ Y++ GSGS   M   +++ +               LSE 
Sbjct: 143 DKTGPH-IYSIHPHGSSDKLPYATMGSGSLAAMTVFESRWRPD-------------LSEE 188

Query: 140 EAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYME 179
           E   LV+   AS    D+ +G  +++ V+ KG +  EY+ 
Sbjct: 189 EGKKLVRDAIASGVFNDLGSGSNIDLCVIRKGSV--EYLR 226


>gi|357624159|gb|EHJ75038.1| hypothetical protein KGM_19166 [Danaus plexippus]
          Length = 205

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/163 (23%), Positives = 70/163 (42%), Gaps = 15/163 (9%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTL--YYKRFFPY 70
           +DK VM   G   D     + +A    +Y+ ++  ++     A      L  Y +   PY
Sbjct: 44  SDKLVMGVIGDSGDTNQFAEYIAKNIQLYKMRNGYELGPSAAANFTRRNLAEYLRSSTPY 103

Query: 71  YSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQ 130
           +   ++GG D E    +Y  D + S  +V +++ G G  L +  +D   K         +
Sbjct: 104 FVNLLMGGYDKENGPELYFMDYLASSMKVPFAAHGFGGYLSLSIMDRYHK---------K 154

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
           DA    +E EA +++K C     +R   +    ++ V+N+ GI
Sbjct: 155 DA----TEEEAYEILKKCVQEVHKRLFVSLPNFQVTVVNRDGI 193


>gi|47028283|gb|AAT09074.1| proteasome beta subunit [Bigelowiella natans]
          Length = 204

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 76/173 (43%), Gaps = 16/173 (9%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            DK  +  SG   DV+ L++    +  +Y  + N+ M     + L+S+TLY KRF PY+ 
Sbjct: 46  GDKLFIGLSGLLTDVQTLKQKFDFKLKMYSLRENRPMRPKVFSSLVSSTLYEKRFGPYFV 105

Query: 73  FNVLGGLDNEGKGCVYTYDAVGS--YERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQ 130
             V+ GLD +    +   D +G+  + +  +   G+ S  +    +   K   P + P  
Sbjct: 106 EPVVAGLDAKEGPFIAAMDLIGAPVFAK-DFVVSGTTSDELYGVCEAFWK---PNMGP-- 159

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                    E  + +     +A +RD   G    + V+ K G+  + ++ RKD
Sbjct: 160 --------DELFETISQSLLAAVDRDCLAGWGAIVHVITKDGVTTKQLKSRKD 204


>gi|323448817|gb|EGB04711.1| hypothetical protein AURANDRAFT_55099 [Aureococcus anophagefferens]
          Length = 274

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 50/105 (47%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
           +D  +M +SG  AD +++   +      Y       M     AQL S  +Y +R FP++ 
Sbjct: 96  SDVVLMGTSGCAADCESMTHDVRTEAERYIVGAKLSMDASVAAQLCSGAMYARRGFPHHM 155

Query: 73  FNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDN 117
             V+ GLD+ G G V+ +D++GS       + GS   ++   LD 
Sbjct: 156 SLVVCGLDSVGFGRVFVFDSIGSLMEGPTVTAGSAREVLQSVLDG 200


>gi|195161717|ref|XP_002021708.1| GL26359 [Drosophila persimilis]
 gi|194103508|gb|EDW25551.1| GL26359 [Drosophila persimilis]
          Length = 204

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 71/173 (41%), Gaps = 31/173 (17%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +GF ADV  +   L  R  +Y+ + + +M+      +LSN LY  RF PY+   V+  LD
Sbjct: 53  TGFLADVNTVWDRLQYRQNLYEIKESCEMTPEAFTTMLSNLLYEHRFGPYHVQAVVAALD 112

Query: 81  NEG-KGCVYTYDAVG------SYERVGYSSQ---GSGSTLIMPFLDNQLKSPSPLLLPAQ 130
               +  + + D +G      S+   G   +   G   TL  P LD     P  L L   
Sbjct: 113 PLALRPYICSVDLIGAPTKKDSFVFCGSCDKQLCGMCETLWTPNLD-----PEQLFLTMS 167

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             +T                 A +R+I  G    + VL+K  I    +++RKD
Sbjct: 168 QTLT----------------HAFDRNITCGWGATVFVLDKDKIMERVIDVRKD 204


>gi|448738995|ref|ZP_21721015.1| proteasome subunit beta [Halococcus thailandensis JCM 13552]
 gi|445800809|gb|EMA51157.1| proteasome subunit beta [Halococcus thailandensis JCM 13552]
          Length = 232

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 16/153 (10%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           SG  +  ++L + L A   +Y+ + +  MS   +A L +N L    F       VLGG+D
Sbjct: 84  SGSVSAAQSLVESLRAEVRLYETRRDTAMSLNALANLTANLLRSGNFQIVQP--VLGGVD 141

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
           +EG   +Y+    GS     Y++ GSGS   +  L+ +    + +     DA T  + A 
Sbjct: 142 DEGA-HIYSIGPGGSVMEETYAASGSGSPFALGVLEGEYDEEASV----DDAETTAARA- 195

Query: 141 AVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
                     SATERD  +G+ L +  +   G+
Sbjct: 196 --------VQSATERDTASGNGLSLATITDEGV 220


>gi|410078369|ref|XP_003956766.1| hypothetical protein KAFR_0C06350 [Kazachstania africana CBS 2517]
 gi|372463350|emb|CCF57631.1| hypothetical protein KAFR_0C06350 [Kazachstania africana CBS 2517]
          Length = 216

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 14/162 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK     SG  AD +A+  ++     +Y+ Q+    S    A +  +  Y  +       
Sbjct: 58  DKIWCCRSGSAADTQAVADIVQYHLELYESQYGAP-SIKTAASVFKSICYENKDNLSAGI 116

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            V G  D   KG VY+    GS  +  Y+  GSGST I  + D + K             
Sbjct: 117 IVAGFDDKNEKGEVYSIPLGGSIHKQKYAIAGSGSTFIYGYCDKKFKE------------ 164

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHR 175
             +++ E V+ +K   + A + D  +G  + +V+L K G+ R
Sbjct: 165 -DMTKDETVNFIKHSLSQAIKWDGSSGGVIRMVILTKEGVER 205


>gi|198472849|ref|XP_002133126.1| GA28829 [Drosophila pseudoobscura pseudoobscura]
 gi|198139188|gb|EDY70528.1| GA28829 [Drosophila pseudoobscura pseudoobscura]
          Length = 204

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 71/173 (41%), Gaps = 31/173 (17%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +GF ADV  +   L  R  +Y+ + + +M+      +LSN LY  RF PY+   V+  LD
Sbjct: 53  TGFLADVNTVWDRLQYRQNLYEIKESCEMTPEAFTTMLSNLLYEHRFGPYHVQAVVAALD 112

Query: 81  NEG-KGCVYTYDAVG------SYERVGYSSQ---GSGSTLIMPFLDNQLKSPSPLLLPAQ 130
               +  + + D +G      S+   G   +   G   TL  P LD     P  L L   
Sbjct: 113 PLALRPYICSVDLIGAPTKKDSFVFCGSCDKQLCGMCETLWTPNLD-----PEQLFLTMS 167

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
             +T                 A +R+I  G    + VL+K  I    +++RKD
Sbjct: 168 QTLT----------------HAFDRNITCGWGATVFVLDKDKIMERVIDVRKD 204


>gi|308493735|ref|XP_003109057.1| CRE-PBS-3 protein [Caenorhabditis remanei]
 gi|308247614|gb|EFO91566.1| CRE-PBS-3 protein [Caenorhabditis remanei]
          Length = 204

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/172 (22%), Positives = 82/172 (47%), Gaps = 16/172 (9%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK  +  +GFQ+D + + + +  R  +Y+ + N+++    +++++SN  Y  RF  Y++ 
Sbjct: 47  DKVYVGLAGFQSDARTVLEKIMFRKNLYELRENRRIKPQVLSEMISNLAYQHRFGSYFTE 106

Query: 74  NVLGGLDNEGKGCVYTYDAVG--SYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQD 131
            ++ GLD+  K  +   D +G  S  R  + + G+G   ++   +N  +     + P + 
Sbjct: 107 PLVAGLDDSNKPYICCMDTIGCVSAPR-DFVAVGTGQEYLLGVCENFWREN---MKPDE- 161

Query: 132 AVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
               L EA A  ++     S  ERD  +G    +  + K  ++   ++ R D
Sbjct: 162 ----LFEATAQSIL-----SCLERDAASGWGAVVYTITKDKVNVSTIKARMD 204


>gi|296413642|ref|XP_002836518.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295630345|emb|CAZ80709.1| unnamed protein product [Tuber melanosporum]
          Length = 229

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 14/156 (8%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           SG  AD +A+  ++     +Y  Q+++  +    A +     Y  +     S  ++ G D
Sbjct: 75  SGSAADTQAIADIVHYYLQLYNVQNHEPPTTQVAASIFQELCYSNKDQLQASM-IIAGYD 133

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
              KG VY+    GS  +  Y+  GSGST I  + D   K               ++E E
Sbjct: 134 ARHKGEVYSIPLGGSLHKQRYAIGGSGSTYIYGYCDANWKE-------------NMTEGE 180

Query: 141 AVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHRE 176
            V+ VK   A A + D  +G  + +VVL + G+ R+
Sbjct: 181 CVEFVKGALAEAVKWDGSSGGVIRMVVLTERGVERK 216


>gi|67588907|ref|XP_665380.1| hypothetical protein [Cryptosporidium hominis TU502]
 gi|54656042|gb|EAL35150.1| hypothetical protein Chro.50424 [Cryptosporidium hominis]
          Length = 290

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 14/153 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G  AD    +++L+    +Y+ ++ +++S  G +++++N  ++ R +   +  ++ G D
Sbjct: 125 AGGAADCSYWERVLSKLCRLYELRNGERISVAGASKMITNIFFHYRAYDLSAGIMIAGFD 184

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
            +G    Y  D  GS  +    S GSGS      LD+  +               L++ E
Sbjct: 185 KDGPHLYYV-DNEGSRVKDCKFSVGSGSLYAYGVLDSGYR-------------YDLTDEE 230

Query: 141 AVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173
           A+DL K     AT RD  +G  + +  +NK G+
Sbjct: 231 AIDLGKRAIVIATNRDGGSGGLVRVYQINKSGV 263


>gi|296805183|ref|XP_002843416.1| proteasome component PUP3 [Arthroderma otae CBS 113480]
 gi|238844718|gb|EEQ34380.1| proteasome component PUP3 [Arthroderma otae CBS 113480]
          Length = 223

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 81/165 (49%), Gaps = 15/165 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G   DV  + +LL  +  +Y+ +  + +S   +A L+S++LY KRF P++   VL G++
Sbjct: 72  TGLATDVNTVSQLLRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGIN 131

Query: 81  N-EGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSE 138
           +  GK  V  +D++G  +    +   G+ S  +    ++  +   P L P +D    +S+
Sbjct: 132 HTTGKPFVCGFDSIGCIDFAKNFIVSGTASDQLYGTCESLWE---PDLEP-EDLFETISQ 187

Query: 139 AEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           A           +A +RD  +G    + ++ K  + +  ++ R+D
Sbjct: 188 A---------LLNAVDRDALSGWGAYVYIIEKDKVTKRKLKGRQD 223


>gi|448536903|ref|XP_003871223.1| Pup3 beta 3 subunit of the 20S proteasome [Candida orthopsilosis Co
           90-125]
 gi|380355579|emb|CCG25098.1| Pup3 beta 3 subunit of the 20S proteasome [Candida orthopsilosis]
          Length = 245

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/173 (21%), Positives = 82/173 (47%), Gaps = 15/173 (8%)

Query: 13  ADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYS 72
            DK  MA +G   DV  L++L   +  +Y+ +  + +    +A L+S++LY +RF P++ 
Sbjct: 86  GDKTYMALTGLATDVITLRELFKFKTNLYKLREERSIEPSTLANLVSSSLYERRFGPWFV 145

Query: 73  FNVLGGLDN-EGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQ 130
             ++ GL + + K  +  +D++G  +    +   G+ +  +    +  L  P+   L  +
Sbjct: 146 GPIVAGLSSKDNKPFICGFDSIGCIDYSHDFIVSGTATDQLYGMCEG-LYEPN---LEPE 201

Query: 131 DAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           D    +S+A           +A +RD  +G    + ++ K  + +  ++ R+D
Sbjct: 202 DLFETISQA---------LLNAVDRDALSGWGAVVYIITKDKVVKRVLKTRQD 245


>gi|389642243|ref|XP_003718754.1| proteasome component PRE4 [Magnaporthe oryzae 70-15]
 gi|351641307|gb|EHA49170.1| proteasome component PRE4 [Magnaporthe oryzae 70-15]
 gi|440468083|gb|ELQ37266.1| proteasome component PRE4 [Magnaporthe oryzae Y34]
 gi|440489043|gb|ELQ68724.1| proteasome component PRE4 [Magnaporthe oryzae P131]
          Length = 269

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 27/170 (15%)

Query: 22  GFQADVKALQKLLAARHL---------------IYQHQHNKQMSCPGMAQLLSNTLYYKR 66
           GF  DV  +Q L   RHL                 +   +  ++   + + LS  LY +R
Sbjct: 84  GFGGDVSDMQYL--DRHLNELAIDEAYANPADESTESSRDSSLNAQNLHKYLSKLLYGRR 141

Query: 67  --FFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSP 124
             F P ++  ++ GLD + K  + + D +G+       + G GS L +P +   +     
Sbjct: 142 NKFDPLWNQILVAGLDADDKPFLASADLLGTTFSAPALASGYGSMLAIPIMRRAV----- 196

Query: 125 LLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIH 174
              P+++    LS  EAV +VK C      RD  + D   + V+ K G+ 
Sbjct: 197 ---PSEEEAAKLSREEAVAVVKECMKVLFYRDARSSDSYSLAVVTKEGVE 243


>gi|115448935|ref|NP_001048247.1| Os02g0770000 [Oryza sativa Japonica Group]
 gi|8671502|dbj|BAA96834.1| beta 1 subunit of 20S proteasome [Oryza sativa Japonica Group]
 gi|46805414|dbj|BAD16916.1| beta 1 subunit of 20S proteasome [Oryza sativa Japonica Group]
 gi|113537778|dbj|BAF10161.1| Os02g0770000 [Oryza sativa Japonica Group]
 gi|125541285|gb|EAY87680.1| hypothetical protein OsI_09094 [Oryza sativa Indica Group]
 gi|125583826|gb|EAZ24757.1| hypothetical protein OsJ_08530 [Oryza sativa Japonica Group]
 gi|215737147|dbj|BAG96076.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215737608|dbj|BAG96738.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215765462|dbj|BAG87159.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 246

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 26/170 (15%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   +  SG  AD + +   +  R+ +  HQH  Q+  P   ++ +N +   R   Y + 
Sbjct: 64  DNVYICRSGSAADTQVISDYV--RYFL--HQHTIQLGQPATVKVAANLI---RLLAYQNK 116

Query: 74  NVL------GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLL 127
           N+L      GG D    G +++    G+  R  ++  GSGS+ +   LD++ K       
Sbjct: 117 NMLQAGMIVGGWDKYEGGQIFSVPLGGTILRQPFAIGGSGSSYLYGLLDHEWKE------ 170

Query: 128 PAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREY 177
                   +S+ EA   V    + A  RD  +G  +  V +N  G+ R++
Sbjct: 171 -------GMSQEEAEKFVVKVVSLAIARDGASGGVVRTVTINADGVSRKF 213


>gi|340502310|gb|EGR29012.1| proteasome subunit beta type, putative [Ichthyophthirius
           multifiliis]
          Length = 286

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 70/152 (46%), Gaps = 14/152 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G  AD +  ++ LA +   YQ QH +++S    +++L N LY  +        +L G D
Sbjct: 114 AGGAADCQFWEQYLAIQCRKYQLQHGERVSVAAASRILINILYGYKNQGLSVGCMLAGWD 173

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
           N+G   +Y  D  GS  +    S GSGST     LD+  K               LS  E
Sbjct: 174 NQGP-QLYYLDNDGSRIKGDLFSVGSGSTYAYGVLDSHYK-------------WDLSLKE 219

Query: 141 AVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
           AV+L K     AT RD  +G  + +  +++GG
Sbjct: 220 AVELGKRAIYHATFRDAGSGGVVRVYHVHQGG 251


>gi|367002177|ref|XP_003685823.1| hypothetical protein TPHA_0E02990 [Tetrapisispora phaffii CBS 4417]
 gi|357524122|emb|CCE63389.1| hypothetical protein TPHA_0E02990 [Tetrapisispora phaffii CBS 4417]
          Length = 216

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 67/162 (41%), Gaps = 14/162 (8%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           DK     SG  AD +A+  ++  +  +Y  Q   + S    A +     Y  +       
Sbjct: 58  DKIWCCRSGSAADTQAVADIVQYQLELYTAQFG-EPSTKVAASIFKTMCYDNKDNLSAGI 116

Query: 74  NVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAV 133
            V G  D E KG VY+    GS  +  Y+  GSGST I  + D   K             
Sbjct: 117 IVAGFDDKENKGEVYSIPLGGSLHKQKYAIAGSGSTFIYGYCDKNYKE------------ 164

Query: 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHR 175
             +++ E VD +K   + A + D  +G  + +VV+ K G+ R
Sbjct: 165 -NMTKDETVDFMKHSLSQAIKWDGSSGGVIRMVVVTKDGVER 205


>gi|116779982|gb|ABK21503.1| unknown [Picea sitchensis]
          Length = 233

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 73/170 (42%), Gaps = 26/170 (15%)

Query: 14  DKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSF 73
           D   +  SG  AD + +   +  R+ +  HQH  Q+  P   ++ +N +   R   Y + 
Sbjct: 52  DNVYLCRSGSAADSQVVSDYV--RYFL--HQHIIQLGQPATVKVTANLI---RLLSYNNK 104

Query: 74  N------VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLL 127
           N      ++GG D    G +Y     G+  ++ ++  GSGS+ +  FLD   K       
Sbjct: 105 NTLETGLIVGGWDKYEGGSIYGVPLGGTMLQLPFAIGGSGSSYLYGFLDQAWKE------ 158

Query: 128 PAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREY 177
                   +S+ EA  LV    + A  RD  +G  +  VV+N  G+ R +
Sbjct: 159 -------GMSKDEAEALVVKSVSLAIARDGASGGVVRTVVINSEGVTRNF 201


>gi|156849065|ref|XP_001647413.1| hypothetical protein Kpol_1018p88 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156118099|gb|EDO19555.1| hypothetical protein Kpol_1018p88 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 205

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 81/168 (48%), Gaps = 15/168 (8%)

Query: 18  MASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLG 77
           +  +G   DV  L +    +  +Y+ + ++ +      QL+S+TLY +RF PY+   V+ 
Sbjct: 51  LGITGLATDVLTLSEEFRYKTNLYKLREDRLIEPETFTQLVSSTLYERRFGPYFVGPVVA 110

Query: 78  GLDNE-GKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTP 135
           G++++ GK  +  +D +G  +    +   G+ S  +    ++ L  P+   L A+D    
Sbjct: 111 GINSKSGKPFIAGFDLIGCIDEAKDFIVSGTASDQLFGMCES-LYEPN---LEAEDLFET 166

Query: 136 LSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
           +S+A           +A +RD  +G    + ++ K  + + +++ R+D
Sbjct: 167 ISQA---------LLNAADRDALSGWGAVVYIIKKDKVIKRHLKTRQD 205


>gi|146414175|ref|XP_001483058.1| hypothetical protein PGUG_05013 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 205

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/164 (22%), Positives = 76/164 (46%), Gaps = 14/164 (8%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           +G   DV  L++    ++ +Y+ +  ++M    +A L+S +LY +RF PY+   ++ GL 
Sbjct: 55  TGLATDVITLREDFRLKNNLYKLREEREMEPKTLANLVSTSLYERRFGPYFVSPIVAGLG 114

Query: 81  NEGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEA 139
             G+  +  +D +G  +    +   G+ S  +    ++ L  P+   L  +D    +S+A
Sbjct: 115 KGGQPFICGFDLIGCIDFAKDFIVSGTASDQLYGTCES-LYEPN---LEPEDLFETISQA 170

Query: 140 EAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYMELRKD 183
                      +A +RD  +G    + V+ K  + R  +  R+D
Sbjct: 171 ---------LLNAVDRDALSGWGAVVYVVTKEKVVRRVLRTRQD 205


>gi|220881|dbj|BAA01572.1| proteasome subunit RC1 [Rattus sp.]
          Length = 208

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 14/152 (9%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLD 80
           SG  AD +  ++LLA    +Y  ++ +++S    ++LLSN +   R       +++ G D
Sbjct: 50  SGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYRGMGLSMGSMICGWD 109

Query: 81  NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAE 140
            +G G  Y  D  G+       S GSG+T     +D+  +         QD    LS  E
Sbjct: 110 KKGPGLYYV-DDNGTRLSGQMFSTGSGNTYAYGVMDSGYR---------QD----LSPEE 155

Query: 141 AVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172
           A DL +     AT RD Y+G  + +  + K G
Sbjct: 156 AYDLARRAIVYATHRDSYSGGVVNMYHMKKDG 187


>gi|448528122|ref|XP_003869666.1| Pre3 beta-1 proteasome subunit [Candida orthopsilosis Co 90-125]
 gi|380354019|emb|CCG23533.1| Pre3 beta-1 proteasome subunit [Candida orthopsilosis]
          Length = 223

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 14/156 (8%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQ-HNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGL 79
           SG  AD +A+  ++     IY  Q  N Q     +A  +   + Y       +  +  G 
Sbjct: 65  SGSAADTQAVADMVKYYLQIYSSQLPNGQKPTTNIAANVFQEICYNNKDNLTAGIICAGY 124

Query: 80  DNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEA 139
           D++  G VY+    GS  +  Y+  GSGST I  + +   K       P  D      + 
Sbjct: 125 DDKYGGSVYSIPIGGSIHKQNYAIAGSGSTFIYGWCNENYK-------PDMD------KD 171

Query: 140 EAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHR 175
           E V+ +KT  A A + D  +G  + +V+L K G+ R
Sbjct: 172 ETVEFIKTALAEAIKWDGSSGGVIRMVILTKKGVER 207


>gi|47210559|emb|CAF96424.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 224

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 13/163 (7%)

Query: 17  VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVL 76
           V  +SG  AD    +++LA    +YQ +H +++S  G A+LLS+ L+  +         L
Sbjct: 74  VGTTSGTSADCVLWKRILARELRLYQLRHGRRLSTRGAAKLLSHMLHPFKGTDLCVAATL 133

Query: 77  GGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPL 136
            G D      ++   + G+       S GSGS      LD             Q     L
Sbjct: 134 CGWDGFSGPSLHYVCSDGTRLPGTLFSVGSGSPYAYSILD-------------QGVEWNL 180

Query: 137 SEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYME 179
           S  EA  + +     AT RD Y+G+ ++I +++  G  R   E
Sbjct: 181 SVEEATSVAREAVFRATHRDAYSGNNVDIYLISSKGWTRRRRE 223


>gi|150864238|ref|XP_001382979.2| hypothetical protein PICST_41720 [Scheffersomyces stipitis CBS
           6054]
 gi|149385494|gb|ABN64950.2| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 217

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 14/156 (8%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQ-HNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGL 79
           SG  AD +A+  ++     IY  Q  N +     +A  +   L Y       +  +  G 
Sbjct: 65  SGSAADTQAVADIVKYYLQIYASQLPNDEKPTTQVAANVFQELCYNNKDNLTAGIICAGY 124

Query: 80  DNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEA 139
           D + KG VY+    GS  +  Y+  GSGST I  + +   K               + + 
Sbjct: 125 DKKNKGSVYSIPIGGSIHKQDYAIAGSGSTFIYGWCNEHFKH-------------DMEQD 171

Query: 140 EAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHR 175
           E V+ +KT  + A + D  +G  + +VVL + G+ R
Sbjct: 172 ETVEFIKTALSEAIKWDGSSGGVIRMVVLTEKGVER 207


>gi|452819220|gb|EME26285.1| 20S proteasome subunit beta 1 [Galdieria sulphuraria]
          Length = 227

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 65/159 (40%), Gaps = 16/159 (10%)

Query: 21  SGFQADVKALQKLLAARHLIYQHQHN-KQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGL 79
           SG  AD +A+   +  R+ +  HQ +   + C   A  +   L Y       +  +  G 
Sbjct: 73  SGSAADTQAIADYV--RYYLSIHQLDLDDLPCVKTAASICRELCYSNKDRLLAGIICAGW 130

Query: 80  DNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEA 139
           D    G VYT    G+  R  YS  GSGST I  F D   +               +S  
Sbjct: 131 DPLYGGQVYTIPLGGTMIRQPYSIGGSGSTYIYGFCDAHFQK-------------GMSRE 177

Query: 140 EAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHREYM 178
           + +D  K   A A  RD  +G  + +VV+ K G+ RE +
Sbjct: 178 QCIDFTKKAVALAMARDGSSGGVIRLVVIEKQGVWREMI 216


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.320    0.136    0.400 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,775,102,352
Number of Sequences: 23463169
Number of extensions: 109790793
Number of successful extensions: 245955
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1085
Number of HSP's successfully gapped in prelim test: 1429
Number of HSP's that attempted gapping in prelim test: 243525
Number of HSP's gapped (non-prelim): 2541
length of query: 183
length of database: 8,064,228,071
effective HSP length: 133
effective length of query: 50
effective length of database: 9,238,593,890
effective search space: 461929694500
effective search space used: 461929694500
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 72 (32.3 bits)