Query 030109
Match_columns 183
No_of_seqs 111 out of 1049
Neff 7.9
Searched_HMMs 13730
Date Mon Mar 25 13:49:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030109.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/030109hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1iruj_ d.153.1.4 (J:) Proteas 100.0 1.8E-40 1.3E-44 259.4 22.5 167 4-183 36-204 (204)
2 d1ryp1_ d.153.1.4 (1:) Proteas 100.0 6.1E-40 4.4E-44 259.0 22.7 179 5-183 39-222 (222)
3 d1ryph_ d.153.1.4 (H:) Proteas 100.0 4.9E-40 3.6E-44 257.3 21.8 160 4-178 38-197 (205)
4 d1iruh_ d.153.1.4 (H:) Proteas 100.0 7.8E-40 5.7E-44 255.3 22.1 163 4-180 29-191 (202)
5 d1rypj_ d.153.1.4 (J:) Proteas 100.0 1.2E-39 8.8E-44 254.1 22.6 166 4-183 37-204 (204)
6 d1rypk_ d.153.1.4 (K:) Proteas 100.0 6.7E-40 4.9E-44 255.0 20.9 158 5-175 31-191 (198)
7 d1irul_ d.153.1.4 (L:) Proteas 100.0 1.6E-39 1.2E-43 253.3 22.3 157 5-175 30-186 (201)
8 d1rypl_ d.153.1.4 (L:) Proteas 100.0 4.1E-39 3E-43 253.0 21.8 160 4-176 29-188 (212)
9 d1irui_ d.153.1.4 (I:) Proteas 100.0 2.6E-38 1.9E-42 249.8 20.5 157 5-176 30-186 (220)
10 d1iruc_ d.153.1.4 (C:) Proteas 100.0 2.8E-38 2E-42 254.2 20.0 158 4-173 59-220 (250)
11 d1yarh1 d.153.1.4 (H:1-203) Pr 100.0 7.7E-38 5.6E-42 244.0 21.8 156 4-174 29-185 (203)
12 d1iru1_ d.153.1.4 (1:) Proteas 100.0 1.6E-37 1.2E-41 242.4 22.7 176 4-183 38-213 (213)
13 d1j2qh_ d.153.1.4 (H:) Proteas 100.0 1.3E-37 9.6E-42 242.0 21.7 157 5-175 30-187 (202)
14 d1irua_ d.153.1.4 (A:) Proteas 100.0 1.3E-37 9.3E-42 249.6 21.3 162 5-178 64-229 (244)
15 d1rypc_ d.153.1.4 (C:) Proteas 100.0 1.3E-37 9.2E-42 249.5 20.2 159 3-174 59-221 (244)
16 d1irug_ d.153.1.4 (G:) Proteas 100.0 2.3E-37 1.7E-41 248.3 19.1 155 4-171 61-219 (245)
17 d1ryp2_ d.153.1.4 (2:) Proteas 100.0 4.2E-37 3E-41 244.6 19.9 160 5-172 38-204 (233)
18 d1rypa_ d.153.1.4 (A:) Proteas 100.0 2.7E-37 2E-41 247.4 18.8 165 4-175 58-226 (243)
19 d1rypi_ d.153.1.4 (I:) Proteas 100.0 1.1E-36 8E-41 240.9 22.1 155 5-174 30-184 (222)
20 d1rypf_ d.153.1.4 (F:) Proteas 100.0 2.5E-37 1.8E-41 246.3 18.4 160 5-174 58-221 (233)
21 d1rypb_ d.153.1.4 (B:) Proteas 100.0 2.6E-36 1.9E-40 242.6 19.9 155 5-173 60-219 (250)
22 d1yara1 d.153.1.4 (A:13-233) P 100.0 5.1E-36 3.7E-40 236.8 20.5 154 5-173 51-208 (221)
23 d1irue_ d.153.1.4 (E:) Proteas 100.0 2.9E-36 2.1E-40 240.1 18.6 154 4-172 55-217 (234)
24 d1iru2_ d.153.1.4 (2:) Proteas 100.0 8.4E-36 6.1E-40 234.7 20.7 160 5-176 38-200 (217)
25 d1rype_ d.153.1.4 (E:) Proteas 100.0 3.1E-36 2.3E-40 240.9 18.5 156 5-174 55-221 (242)
26 d1j2pa_ d.153.1.4 (A:) Proteas 100.0 1.5E-35 1.1E-39 237.2 21.3 153 5-173 60-216 (243)
27 d1iruk_ d.153.1.4 (K:) Proteas 100.0 1.3E-35 9.2E-40 228.2 19.9 166 4-182 30-198 (199)
28 d1rypd_ d.153.1.4 (D:) Proteas 100.0 5.5E-35 4E-39 233.7 22.2 157 4-173 57-218 (241)
29 d1iruf_ d.153.1.4 (F:) Proteas 100.0 1.7E-35 1.2E-39 236.3 18.2 157 5-173 56-217 (238)
30 d1rypg_ d.153.1.4 (G:) Proteas 100.0 4.4E-35 3.2E-39 234.7 20.3 151 6-170 60-217 (244)
31 d1irud_ d.153.1.4 (D:) Proteas 100.0 6.4E-35 4.6E-39 233.6 19.3 153 4-172 56-214 (243)
32 d1irub_ d.153.1.4 (B:) Proteas 100.0 7.9E-35 5.8E-39 231.1 19.6 158 4-176 59-220 (233)
33 d1q5qa_ d.153.1.4 (A:) Proteas 100.0 2.7E-34 2E-38 227.9 18.3 156 5-173 41-208 (227)
34 d1q5qh_ d.153.1.4 (H:) Proteas 100.0 8.2E-33 5.9E-37 217.8 21.2 159 5-176 30-205 (224)
35 d2z3ba1 d.153.1.4 (A:1-180) Hs 99.7 4.4E-19 3.2E-23 134.3 4.2 144 5-169 36-180 (180)
36 d1m4ya_ d.153.1.4 (A:) HslV (C 99.7 3E-17 2.2E-21 122.7 12.8 143 4-168 29-171 (171)
37 d1g3ka_ d.153.1.4 (A:) HslV (C 99.7 2E-16 1.5E-20 118.5 10.7 143 4-168 29-172 (173)
38 d2a2la1 d.110.9.1 (A:4-145) Dh 73.2 3.1 0.00022 28.0 5.3 39 134-176 8-46 (142)
39 d1cuka1 a.5.1.1 (A:156-203) DN 70.6 2 0.00015 23.7 3.0 34 103-149 14-47 (48)
40 d1l0oc_ a.4.13.2 (C:) SigmaF { 68.2 4.6 0.00033 22.7 4.5 34 26-59 9-42 (57)
41 d1rp3a1 a.4.13.1 (A:87-163) Si 59.1 8.4 0.00061 22.7 4.7 33 27-59 5-37 (77)
42 d2d9ia1 d.68.8.1 (A:8-90) Nedd 48.0 14 0.001 22.0 4.4 39 135-173 8-46 (83)
43 d1ku2a1 a.4.13.1 (A:273-332) S 43.4 24 0.0018 19.8 4.7 30 29-58 9-38 (60)
44 d1u94a2 d.48.1.1 (A:269-328) R 33.9 17 0.0013 20.6 2.9 29 90-118 16-44 (60)
45 d1vi9a_ c.72.1.5 (A:) Pyridoxa 28.3 59 0.0043 23.5 6.1 40 103-156 219-258 (288)
46 d2hs5a1 a.4.5.6 (A:25-93) Puta 27.3 22 0.0016 20.2 2.7 33 27-59 4-36 (69)
47 d1xrka_ d.32.1.2 (A:) Bleomyci 25.2 23 0.0017 21.2 2.7 17 83-99 101-117 (120)
48 g2gac.1 d.153.1.5 (A:,B:) Glyc 25.1 71 0.0052 23.5 5.9 69 92-173 173-250 (275)
49 g1apy.1 d.153.1.5 (A:,B:) Glyc 24.0 61 0.0045 24.2 5.4 63 93-173 199-268 (302)
50 d1mo6a2 d.48.1.1 (A:270-329) R 23.4 14 0.001 21.0 1.1 29 90-118 16-44 (60)
51 d1jxha_ c.72.1.2 (A:) 4-amino- 22.8 1.2E+02 0.0089 21.4 7.3 55 87-155 187-246 (266)
52 d1jifa_ d.32.1.2 (A:) Bleomyci 21.7 30 0.0021 20.9 2.7 18 82-99 101-118 (122)
53 d1vjea_ d.185.1.2 (A:) Autoind 21.0 86 0.0063 20.9 5.1 68 87-154 67-142 (149)
54 d1vh4a_ b.80.6.1 (A:) Stabiliz 20.6 50 0.0036 25.2 4.4 52 84-153 338-389 (413)
55 d3bzka5 c.55.3.13 (A:325-473) 20.5 1.1E+02 0.008 20.0 7.6 89 76-173 7-100 (149)
56 d1hh2p4 d.202.1.1 (P:1-126) Tr 20.3 78 0.0057 20.1 4.7 39 134-172 16-54 (126)
No 1
>d1iruj_ d.153.1.4 (J:) Proteasome beta subunit (catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=1.8e-40 Score=259.40 Aligned_cols=167 Identities=20% Similarity=0.337 Sum_probs=159.7
Q ss_pred cccceeEEecCceEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCCceeeEEEEEEeCCC
Q 030109 4 FFYILTSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEG 83 (183)
Q Consensus 4 ~~~~ki~~I~~~i~~~~sG~~aD~~~l~~~~r~~~~~~~~~~~~~i~~~~la~~is~~ly~~r~~P~~v~~lvaG~D~~g 83 (183)
...+||++|++|++++++|..+|++.+.+.++.+++.|++.++.+++++.+|+++++++|.+|++||++++||||||+++
T Consensus 36 ~~~~Ki~~I~~~i~~~~sG~~aD~~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~p~~~~~lvaG~D~~~ 115 (204)
T d1iruj_ 36 TDFQKIFPMGDRLYIGLAGLATDVQTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKT 115 (204)
T ss_dssp SCCCCEEECSTTEEEECCSCHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHTTTTSCCSCCCEEEEECTTS
T ss_pred CcccEEEEeCCCeEEEeccCchHHHHHHHHHHHhhhhhhhhcccccchHHHHHHHHHHHHHhhhccceeEEEEEEEcCCC
Confidence 45689999999999999999999999999999999999999999999999999999999998889999999999999754
Q ss_pred -ceEEEEEcCCCceeee-CeEEEcCChhhhHHHHHcccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCC
Q 030109 84 -KGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGD 161 (183)
Q Consensus 84 -~p~Ly~iD~~G~~~~~-~~~a~G~gs~~~~~~Le~~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~~~~~rd~~~g~ 161 (183)
+|.+|.+|+.|....+ .++++|+|+++++++||+.|++ +||.+||++++++||+.+.+||+.+++
T Consensus 116 ~~~~~~~~d~~g~~~~~~~~~~~G~g~~~~~~~l~~~~~~-------------~ms~~ea~~l~~~al~~a~~rd~~sg~ 182 (204)
T d1iruj_ 116 FKPFICSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEP-------------NMDPDHLFETISQAMLNAVDRDAVSGM 182 (204)
T ss_dssp CCEEEEEECTTCCEEECSSEEEEETTHHHHHHHHHHHCCS-------------SCCHHHHHHHHHHHHHHHGGGBTTSCS
T ss_pred CceEEEEecCCCceeeecceEEechhHHHHHHHHHhcccc-------------CCCHHHHHHHHHHHHHHHHhhcccCCC
Confidence 6899999999998775 5899999999999999999997 999999999999999999999999999
Q ss_pred cEEEEEEcCCCeEEEeeeccCC
Q 030109 162 KLEIVVLNKGGIHREYMELRKD 183 (183)
Q Consensus 162 ~i~I~ii~k~g~~~~~~~~~~~ 183 (183)
+++|++|+|+|++++.+|+|+|
T Consensus 183 ~~~v~ii~k~gi~~~~~~~r~D 204 (204)
T d1iruj_ 183 GVIVHIIEKDKITTRTLKARMD 204 (204)
T ss_dssp CEEEEEEESSBEEEEEBCCCCC
T ss_pred cEEEEEEeCCCEEEEEEecCCC
Confidence 9999999999999999999998
No 2
>d1ryp1_ d.153.1.4 (1:) Proteasome beta subunit (catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=6.1e-40 Score=259.01 Aligned_cols=179 Identities=41% Similarity=0.670 Sum_probs=162.9
Q ss_pred ccceeEEecCceEEEecCCHHHHHHHHHHHHHHHHHHHHhcC-CCCCHHHHHHHHHHHHhhhcCCCceeeEEEEEEeCCC
Q 030109 5 FYILTSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEG 83 (183)
Q Consensus 5 ~~~ki~~I~~~i~~~~sG~~aD~~~l~~~~r~~~~~~~~~~~-~~i~~~~la~~is~~ly~~r~~P~~v~~lvaG~D~~g 83 (183)
..+||++|++|++++++|..+|++.+.++++.+++.|++.++ .++++..++++++..+|.+|.+||++++||+|+|+++
T Consensus 39 ~~~KI~~I~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~G~d~~~ 118 (222)
T d1ryp1_ 39 YEPKVFDCGDNIVMSANGFAADGDALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDEDG 118 (222)
T ss_dssp CCCCCEECSTTCEEEEEESHHHHHHHHHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHTTTTSCCCEEEEEEEECTTS
T ss_pred CcceEEEecCCEEEEeccChHHHHHHHHHHHHHhhhhhhhcCCCCCcHHHHHHHHHHHHHhhhhhhheeeeeEEEEeCCC
Confidence 568999999999999999999999999999999999998865 6789999999999999998899999999999999999
Q ss_pred ceEEEEEcCCCceeeeCeEEEcCChhhhHHHHHcccCCCCC-CC---CCCCCCCCCCCHHHHHHHHHHHHHHHHhhcccc
Q 030109 84 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSP-LL---LPAQDAVTPLSEAEAVDLVKTCFASATERDIYT 159 (183)
Q Consensus 84 ~p~Ly~iD~~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~~~-~~---~~~~~~~~~ls~~eA~~l~~~al~~~~~rd~~~ 159 (183)
+|+||.+||+|++.+++++|+|+|+++++++||++|+.++. .. .-.....++||.+||++++++||..+.+||+.+
T Consensus 119 ~~~Ly~~D~~G~~~~~~~~a~G~g~~~a~~~Le~~~~~~~~~~~~~~~~~~~~~~~lt~~ea~~l~~~al~~a~~rd~~s 198 (222)
T d1ryp1_ 119 KGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPGTNGKVKKPLKYLSVEEVIKLVRDSFTSATERHIQV 198 (222)
T ss_dssp CEEEEEECTTSCEEEESEEEEETTHHHHHHHHHHHTSCTTCBCTTSTTCSBCCCCCCCHHHHHHHHHHHHHHHHHHBTTC
T ss_pred CeEEEEECCCcEEEEeceEEEcccHHHHHHHHHHhhccccccCcccchhhhcccccccHHHHHHHHHHHHHHHHHhcccC
Confidence 89999999999999999999999999999999999985221 10 011133468999999999999999999999999
Q ss_pred CCcEEEEEEcCCCeEEEeeeccCC
Q 030109 160 GDKLEIVVLNKGGIHREYMELRKD 183 (183)
Q Consensus 160 g~~i~I~ii~k~g~~~~~~~~~~~ 183 (183)
+++++|++|+|||++++.+++|.|
T Consensus 199 g~~v~v~iitkdGv~~~~~~l~~D 222 (222)
T d1ryp1_ 199 GDGLEILIVTKDGVRKEFYELKRD 222 (222)
T ss_dssp CSEEEEEEEETTEEEEEEEECCCC
T ss_pred CCcEEEEEEeCCCEEEEEEecCCC
Confidence 999999999999999999999998
No 3
>d1ryph_ d.153.1.4 (H:) Proteasome beta subunit (catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=4.9e-40 Score=257.32 Aligned_cols=160 Identities=26% Similarity=0.361 Sum_probs=152.2
Q ss_pred cccceeEEecCceEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCCceeeEEEEEEeCCC
Q 030109 4 FFYILTSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEG 83 (183)
Q Consensus 4 ~~~~ki~~I~~~i~~~~sG~~aD~~~l~~~~r~~~~~~~~~~~~~i~~~~la~~is~~ly~~r~~P~~v~~lvaG~D~~g 83 (183)
...+||++|++|++|+++|..+|++.+.++++.+++.|+++++++ ++..+++++++++|.+| +||++++||||||+++
T Consensus 38 ~~~~ki~~i~~~i~~~~sG~~aD~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~p~~~~~lvaG~d~~~ 115 (205)
T d1ryph_ 38 RVTDKLTRVHDKIWCCRSGSAADTQAIADIVQYHLELYTSQYGTP-STETAASVFKELCYENK-DNLTAGIIVAGYDDKN 115 (205)
T ss_dssp SSCCCEEEEETTEEEEEEEBHHHHHHHHHHHHHHHHHHHHHHSSC-CHHHHHHHHHHHHHHTT-TTCCEEEEEEEEETTT
T ss_pred cccceEEEccCceEEeeccchhHHHHHHHHHHHHHHHHHHHcCCc-cHHHHHHHHHHHHHhCc-cCceEEEEEEeecCCC
Confidence 356899999999999999999999999999999999999999965 58889999999999876 6999999999999988
Q ss_pred ceEEEEEcCCCceeeeCeEEEcCChhhhHHHHHcccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCcE
Q 030109 84 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKL 163 (183)
Q Consensus 84 ~p~Ly~iD~~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~~~~~rd~~~g~~i 163 (183)
+|+||++||.|++.+++++|+|+|+.+++++||+.|++ +||.+||++++++||+.+.+||+.+++++
T Consensus 116 ~p~Ly~~d~~G~~~~~~~~a~G~g~~~~~~~Le~~~~~-------------~ms~~ea~~l~~~al~~a~~rD~~sg~~v 182 (205)
T d1ryph_ 116 KGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRE-------------NMSKEETVDFIKHSLSQAIKWDGSSGGVI 182 (205)
T ss_dssp EEEEEEECTTSCCEEESEEEESGGGGGGHHHHHHHCCT-------------TCCHHHHHHHHHHHHHHHHHHBTTCCSCE
T ss_pred CcEEEEECCCCcEEecCeEEeecCcHHHHHHHHhhhhc-------------ccCHHHHHHHHHHHHHHHHHhcCcCCCCE
Confidence 89999999999999999999999999999999999997 99999999999999999999999999999
Q ss_pred EEEEEcCCCeEEEee
Q 030109 164 EIVVLNKGGIHREYM 178 (183)
Q Consensus 164 ~I~ii~k~g~~~~~~ 178 (183)
+|++|||+|++++.+
T Consensus 183 ~v~iitk~G~~~~~~ 197 (205)
T d1ryph_ 183 RMVVLTAAGVERLIF 197 (205)
T ss_dssp EEEEEETTEEEEEEE
T ss_pred EEEEEcCCceEEEec
Confidence 999999999988765
No 4
>d1iruh_ d.153.1.4 (H:) Proteasome beta subunit (catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=7.8e-40 Score=255.35 Aligned_cols=163 Identities=20% Similarity=0.257 Sum_probs=156.6
Q ss_pred cccceeEEecCceEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCCceeeEEEEEEeCCC
Q 030109 4 FFYILTSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEG 83 (183)
Q Consensus 4 ~~~~ki~~I~~~i~~~~sG~~aD~~~l~~~~r~~~~~~~~~~~~~i~~~~la~~is~~ly~~r~~P~~v~~lvaG~D~~g 83 (183)
...+||++|++|++++++|..+|++.+.+.++.+++.|+++++++++++.+++++++++|.+| +||++++|++|+|+++
T Consensus 29 ~~~~KI~~i~~~i~~~~sG~~aD~~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~l~~~~-~p~~~~~lvaG~d~~~ 107 (202)
T d1iruh_ 29 RVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYR-EDLMAGIIIAGWDPQE 107 (202)
T ss_dssp SSCCCEEEEETTEEEEEEECHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTT-TTCCEEEEEEEEETTT
T ss_pred CCcceEEEcCCcEEEEeccchHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhhc-cceeEEEEEEEeecCC
Confidence 456899999999999999999999999999999999999999999999999999999999876 6999999999999988
Q ss_pred ceEEEEEcCCCceeeeCeEEEcCChhhhHHHHHcccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCcE
Q 030109 84 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKL 163 (183)
Q Consensus 84 ~p~Ly~iD~~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~~~~~rd~~~g~~i 163 (183)
+|+||.+||.|++.+.+++++|+|+.+++++||+.|++ +|+.+||++++++||..+.+||+.+|+++
T Consensus 108 ~~~l~~~d~~g~~~~~~~~a~G~g~~~a~~~L~~~~~~-------------~~~~~ea~~l~~~al~~a~~rD~~sg~~i 174 (202)
T d1iruh_ 108 GGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYRE-------------GMTKEECLQFTANALALAMERDGSSGGVI 174 (202)
T ss_dssp EEEEEEECTTSCCEECSEEEESGGGGGGHHHHHHHCCT-------------TCCHHHHHHHHHHHHHHHHHHBTTCCSCE
T ss_pred CcEEEEECCCCceeecceeEEeCCHHHHHHHHHHhhcc-------------CCcHHHHHHHHHHHHHHHHhhCCCCCCCE
Confidence 89999999999999999999999999999999999997 99999999999999999999999999999
Q ss_pred EEEEEcCCCeEEEeeec
Q 030109 164 EIVVLNKGGIHREYMEL 180 (183)
Q Consensus 164 ~I~ii~k~g~~~~~~~~ 180 (183)
+|++|+++|++++.++.
T Consensus 175 ~v~vi~~~G~~~~~~~~ 191 (202)
T d1iruh_ 175 RLAAIAESGVERQVLLG 191 (202)
T ss_dssp EEEEEETTEEEEEEECG
T ss_pred EEEEEeCCCeEEEEcCH
Confidence 99999999999877764
No 5
>d1rypj_ d.153.1.4 (J:) Proteasome beta subunit (catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=1.2e-39 Score=254.12 Aligned_cols=166 Identities=19% Similarity=0.414 Sum_probs=158.2
Q ss_pred cccceeEEecCceEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCCceeeEEEEEEeC-C
Q 030109 4 FFYILTSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDN-E 82 (183)
Q Consensus 4 ~~~~ki~~I~~~i~~~~sG~~aD~~~l~~~~r~~~~~~~~~~~~~i~~~~la~~is~~ly~~r~~P~~v~~lvaG~D~-~ 82 (183)
...+||+++ ++++++++|..+|++.+.++++.+++.|+++++.+++++.+++++++.+|.++.+||++++|++|||+ +
T Consensus 37 ~~~~Ki~~i-~~i~~~~~G~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~l~~~~~~p~~v~~li~G~d~~~ 115 (204)
T d1rypj_ 37 NKFEKIFHY-GHVFLGITGLATDVTTLNEMFRYKTNLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKS 115 (204)
T ss_dssp SCCCCEEEE-TTEEEEEEECHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHTTTTSCCCEEEEEEEECTTT
T ss_pred CcccEEEEc-CCEEEEecCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHhhcccceeeeEEEEEEecCC
Confidence 356899999 59999999999999999999999999999999999999999999999999988889999999999996 4
Q ss_pred CceEEEEEcCCCceeeeC-eEEEcCChhhhHHHHHcccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCC
Q 030109 83 GKGCVYTYDAVGSYERVG-YSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGD 161 (183)
Q Consensus 83 g~p~Ly~iD~~G~~~~~~-~~a~G~gs~~~~~~Le~~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~~~~~rd~~~g~ 161 (183)
|.|+||++||+|++.+++ ++++|+|+.+++++||+.|++ +||++||++++++||..+.+||+.+++
T Consensus 116 g~~~L~~~D~~G~~~~~~~~~~~G~g~~~a~~~l~~~~~~-------------~ms~~ea~~l~~~al~~a~~~d~~sg~ 182 (204)
T d1rypj_ 116 GKPFIAGFDLIGCIDEAKDFIVSGTASDQLFGMCESLYEP-------------NLEPEDLFETISQALLNAADRDALSGW 182 (204)
T ss_dssp CCEEEEEECTTCCEECCSSEEEEETTHHHHHHHHHHHCCS-------------SCCHHHHHHHHHHHHHHHHTTBTTSCS
T ss_pred CcceEEEeCCCCccccccCcEEeecchHHHHHHHHhcccc-------------CCCHHHHHHHHHHHHHHHHHhcCccCC
Confidence 569999999999998765 899999999999999999997 999999999999999999999999999
Q ss_pred cEEEEEEcCCCeEEEeeeccCC
Q 030109 162 KLEIVVLNKGGIHREYMELRKD 183 (183)
Q Consensus 162 ~i~I~ii~k~g~~~~~~~~~~~ 183 (183)
+++|++|+|+|++++.+|+|+|
T Consensus 183 ~~~v~ii~kdg~~~~~~~l~~D 204 (204)
T d1rypj_ 183 GAVVYIIKKDEVVKRYLKMRQD 204 (204)
T ss_dssp CEEEEEEESSCEEEEEECCCCC
T ss_pred eEEEEEEECCceEEEEeccCCC
Confidence 9999999999999999999998
No 6
>d1rypk_ d.153.1.4 (K:) Proteasome beta subunit (catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=6.7e-40 Score=254.99 Aligned_cols=158 Identities=19% Similarity=0.313 Sum_probs=151.1
Q ss_pred ccceeEEecCceEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhh--cCCCceeeEEEEEEeC-
Q 030109 5 FYILTSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYK--RFFPYYSFNVLGGLDN- 81 (183)
Q Consensus 5 ~~~ki~~I~~~i~~~~sG~~aD~~~l~~~~r~~~~~~~~~~~~~i~~~~la~~is~~ly~~--r~~P~~v~~lvaG~D~- 81 (183)
..+||++|++|++++++|..+|++.+.+.++.+++.|+++++.+++++.+++++++++|.+ +.|||++++||||||+
T Consensus 31 ~~~KI~~I~~~i~~~~sG~~aD~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~P~~~~~liaG~D~~ 110 (198)
T d1rypk_ 31 SDDKTRQLSPHTLMSFAGEAGDTVQFAEYIQANIQLYSIREDYELSPQAVSSFVRQELAKSIRSRRPYQVNVLIGGYDKK 110 (198)
T ss_dssp CCCCEEEEETTEEEEEEESHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHTTSSSCCCEEEEEEEEETT
T ss_pred ccceEEEecCCEEEEecCCcccHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHhcccccceEEEEEEEecC
Confidence 5689999999999999999999999999999999999999999999999999999999873 3689999999999997
Q ss_pred CCceEEEEEcCCCceeeeCeEEEcCChhhhHHHHHcccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCC
Q 030109 82 EGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGD 161 (183)
Q Consensus 82 ~g~p~Ly~iD~~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~~~~~rd~~~g~ 161 (183)
+++|+||++||+|++.+++++++|+|+.+++++||++|++ +|+.+||++++++||+.+.+||+.+++
T Consensus 111 ~~~p~L~~id~~G~~~~~~~~a~G~gs~~~~~~Le~~~~~-------------~~~~eea~~l~~~~l~~~~~~d~~s~~ 177 (198)
T d1rypk_ 111 KNKPELYQIDYLGTKVELPYGAHGYSGFYTFSLLDHHYRP-------------DMTTEEGLDLLKLCVQELEKRMPMDFK 177 (198)
T ss_dssp TTEEEEEEECTTCCEEECSEEECTTHHHHHHHHHHHHCCT-------------TCCHHHHHHHHHHHHHHHHHHCSBCCC
T ss_pred CCceEEEEecccccEEecceEEEeccchhhHHHHHhcccc-------------cCCHHHHHHHHHHHHHHHHHhcCcCCC
Confidence 4679999999999999999999999999999999999998 999999999999999999999999999
Q ss_pred cEEEEEEcCCCeEE
Q 030109 162 KLEIVVLNKGGIHR 175 (183)
Q Consensus 162 ~i~I~ii~k~g~~~ 175 (183)
+++|++|+++|+++
T Consensus 178 ~~~v~vi~~dG~~~ 191 (198)
T d1rypk_ 178 GVIVKIVDKDGIRQ 191 (198)
T ss_dssp CEEEEEEETTEEEE
T ss_pred cEEEEEEcCCCeEE
Confidence 99999999999864
No 7
>d1irul_ d.153.1.4 (L:) Proteasome beta subunit (catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=1.6e-39 Score=253.33 Aligned_cols=157 Identities=23% Similarity=0.258 Sum_probs=151.9
Q ss_pred ccceeEEecCceEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCCceeeEEEEEEeCCCc
Q 030109 5 FYILTSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGK 84 (183)
Q Consensus 5 ~~~ki~~I~~~i~~~~sG~~aD~~~l~~~~r~~~~~~~~~~~~~i~~~~la~~is~~ly~~r~~P~~v~~lvaG~D~~g~ 84 (183)
..+|||+|+++++|+++|..+|++.+.+.++.+++.|++.++.+++++.+++++++++|.+|.+||++++|++|+|++ +
T Consensus 30 ~~~KI~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~p~~~~~lvaG~d~~-~ 108 (201)
T d1irul_ 30 TVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKR-G 108 (201)
T ss_dssp CCCCEEEEETTEEEECCBCHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHTTTTSCCCBEEEEEEECSS-S
T ss_pred CcccEEEeCCcEEEEEcCccchHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHhhhccCCCceEEEEEEEEecC-C
Confidence 468999999999999999999999999999999999999999999999999999999999988999999999999986 4
Q ss_pred eEEEEEcCCCceeeeCeEEEcCChhhhHHHHHcccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCcEE
Q 030109 85 GCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLE 164 (183)
Q Consensus 85 p~Ly~iD~~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~~~~~rd~~~g~~i~ 164 (183)
|+||++||+|++.+++++|+|+|+++++++||+.|++ +||.+||++++++||+.+.+||+.++++++
T Consensus 109 ~~l~~~d~~G~~~~~~~~a~G~g~~~~~~~Le~~~~~-------------~ms~eea~~l~~~~l~~~~~~d~~sg~~~~ 175 (201)
T d1irul_ 109 PGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSY-------------DLEVEQAYDLARRAIYQATYRDAYSGGAVN 175 (201)
T ss_dssp EEEEEEESSSCEEECSEEEESTTHHHHHHHHHTTCCT-------------TCCHHHHHHHHHHHHHHHHHHBTTCCSEEE
T ss_pred ceEEEEccCceEEEeeeEEecCchHHHHHHHHhhccC-------------CCCHHHHHHHHHHHHHHHHHhCCCCCCceE
Confidence 9999999999999999999999999999999999997 999999999999999999999999999999
Q ss_pred EEEEcCCCeEE
Q 030109 165 IVVLNKGGIHR 175 (183)
Q Consensus 165 I~ii~k~g~~~ 175 (183)
|++|+++|++.
T Consensus 176 v~~i~~~G~~~ 186 (201)
T d1irul_ 176 LYHVREDGWIR 186 (201)
T ss_dssp EEEECSSCEEE
T ss_pred EEEEeCCceEE
Confidence 99999999764
No 8
>d1rypl_ d.153.1.4 (L:) Proteasome beta subunit (catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=4.1e-39 Score=253.04 Aligned_cols=160 Identities=19% Similarity=0.197 Sum_probs=154.1
Q ss_pred cccceeEEecCceEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCCceeeEEEEEEeCCC
Q 030109 4 FFYILTSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEG 83 (183)
Q Consensus 4 ~~~~ki~~I~~~i~~~~sG~~aD~~~l~~~~r~~~~~~~~~~~~~i~~~~la~~is~~ly~~r~~P~~v~~lvaG~D~~g 83 (183)
...+||++|+++++|+++|..+|++.++++++.+++.|++.++++++++.+++++++++|.+++.|++++.+++|+|+++
T Consensus 29 ~~~~KI~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~ls~~~~~~~~~p~~~~~~l~G~~~~~ 108 (212)
T d1rypl_ 29 QTVKRVIEINPFLLGTMAGGAADCQFWETWLGSQCRLHELREKERISVAAASKILSNLVYQYKGAGLSMGTMICGYTRKE 108 (212)
T ss_dssp SCCCCEEEEETTEEEECCBCHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHTTTSCCCBEEEEEEEETTT
T ss_pred CCcceEEEECCcEEEEeccchHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHhccCCcceEeeeeEeecCC
Confidence 35689999999999999999999999999999999999999999999999999999999998888999999999999988
Q ss_pred ceEEEEEcCCCceeeeCeEEEcCChhhhHHHHHcccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCcE
Q 030109 84 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKL 163 (183)
Q Consensus 84 ~p~Ly~iD~~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~~~~~rd~~~g~~i 163 (183)
+|+||++||+|++.+++++|+|+|+++++++||+.|++ +||++||++++++||+.+.+||+.+++++
T Consensus 109 g~~Ly~id~~G~~~~~~~~a~G~gs~~~~~~Le~~~~~-------------~mt~~ea~~l~~~al~~~~~rd~~sg~~v 175 (212)
T d1rypl_ 109 GPTIYYVDSDGTRLKGDIFCVGSGQTFAYGVLDSNYKW-------------DLSVEDALYLGKRSILAAAHRDAYSGGSV 175 (212)
T ss_dssp EEEEEEEETTCCEEECSEEEESTTHHHHHHHHHHHCCT-------------TCCHHHHHHHHHHHHHHHHHHBTTCCSEE
T ss_pred CCEEEEECCCceEEecceEEEccCcccchhHHHHhccC-------------CCCHHHHHHHHHHHHHHHHHhcCCCCCce
Confidence 89999999999999999999999999999999999997 99999999999999999999999999999
Q ss_pred EEEEEcCCCeEEE
Q 030109 164 EIVVLNKGGIHRE 176 (183)
Q Consensus 164 ~I~ii~k~g~~~~ 176 (183)
+|++|+++|++..
T Consensus 176 ~v~vi~~~g~~~~ 188 (212)
T d1rypl_ 176 NLYHVTEDGWIYH 188 (212)
T ss_dssp EEEEEETTEEEEE
T ss_pred EEEEEcCCceEEe
Confidence 9999999998643
No 9
>d1irui_ d.153.1.4 (I:) Proteasome beta subunit (catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=2.6e-38 Score=249.79 Aligned_cols=157 Identities=20% Similarity=0.289 Sum_probs=150.2
Q ss_pred ccceeEEecCceEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCCceeeEEEEEEeCCCc
Q 030109 5 FYILTSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGK 84 (183)
Q Consensus 5 ~~~ki~~I~~~i~~~~sG~~aD~~~l~~~~r~~~~~~~~~~~~~i~~~~la~~is~~ly~~r~~P~~v~~lvaG~D~~g~ 84 (183)
..+||++|++|++++++|..+|++.+.++++.+++.|+++++++++++.+++++++++|.+| +|+++++|+||+|++|
T Consensus 30 ~~~KI~~i~~~i~~~~aG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~y~~~-~p~~~~~ivaG~D~~g- 107 (220)
T d1irui_ 30 NCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFRYR-GYIGAALVLGGVDVTG- 107 (220)
T ss_dssp SCCCEEEEETTEEEEEEESHHHHHHHHHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHHHHTT-TCSCEEEEEEEECSSC-
T ss_pred CcccEEEecCcEEEEEccccHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhhhhhcc-cccceeEEEEEEeCCC-
Confidence 45799999999999999999999999999999999999999999999999999999999766 6999999999999765
Q ss_pred eEEEEEcCCCceeeeCeEEEcCChhhhHHHHHcccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCcEE
Q 030109 85 GCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLE 164 (183)
Q Consensus 85 p~Ly~iD~~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~~~~~rd~~~g~~i~ 164 (183)
|+||++||+|++.+++++|+|+|+++++++|++.|++ +||.+||++++++||+.+.+||+.++++++
T Consensus 108 ~~L~~id~~G~~~~~~~~a~Gsgs~~a~~~L~~~~~~-------------~~s~~ea~~l~~~al~~~~~~D~~sg~~i~ 174 (220)
T d1irui_ 108 PHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRP-------------DMEEEEAKNLVSEAIAAGIFNDLGSGSNID 174 (220)
T ss_dssp EEEEEECTTSCEEECSEEEESTTHHHHHHHHHHSCCT-------------TCCHHHHHTHHHHHHHHHHHHCTTCCSCEE
T ss_pred cEEEEEeCCCcEEEeeEEEEccccHHHHHHHHHhccc-------------CCCHHHHHHHHHHHHHHhhccCCCCCCcEE
Confidence 9999999999999999999999999999999999997 999999999999999999999999999999
Q ss_pred EEEEcCCCeEEE
Q 030109 165 IVVLNKGGIHRE 176 (183)
Q Consensus 165 I~ii~k~g~~~~ 176 (183)
|++|+++|+++.
T Consensus 175 i~vitkdg~~~~ 186 (220)
T d1irui_ 175 LCVISKNKLDFL 186 (220)
T ss_dssp EEEEETTEEECC
T ss_pred EEEEECCCeEEe
Confidence 999999998543
No 10
>d1iruc_ d.153.1.4 (C:) Proteasome alpha subunit (non-catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=2.8e-38 Score=254.21 Aligned_cols=158 Identities=17% Similarity=0.194 Sum_probs=150.1
Q ss_pred cccceeEEecCceEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhc----CCCceeeEEEEEE
Q 030109 4 FFYILTSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKR----FFPYYSFNVLGGL 79 (183)
Q Consensus 4 ~~~~ki~~I~~~i~~~~sG~~aD~~~l~~~~r~~~~~~~~~~~~~i~~~~la~~is~~ly~~r----~~P~~v~~lvaG~ 79 (183)
...+||++|++|++|+++|..+|++.+++++|.+++.|++.++.+++++.+++.++++++.++ +|||++++||+||
T Consensus 59 ~~~~KI~~I~~~i~~~~sG~~~D~~~l~~~~r~~~~~~~~~~~~~i~~~~la~~l~~~~~~~~~~~~~rP~~~~~li~G~ 138 (250)
T d1iruc_ 59 FFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGW 138 (250)
T ss_dssp SSCSSEEECSSSEEEEEEECHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHTTTBSSCCCCCEEEEEEEE
T ss_pred cccceEEECCCcEEEEeecccchHHHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHHHhhhccCCcceEEEEEEEE
Confidence 356899999999999999999999999999999999999999999999999999999997643 5899999999999
Q ss_pred eCCCceEEEEEcCCCceeeeCeEEEcCChhhhHHHHHcccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcccc
Q 030109 80 DNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYT 159 (183)
Q Consensus 80 D~~g~p~Ly~iD~~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~~~~~rd~~~ 159 (183)
|++++|+||++||+|++.+++++|+|+|++.++++||++|++ ++|+++||++++++||+.+.++|..+
T Consensus 139 D~~~gp~Ly~~Dp~G~~~~~~~~a~G~gs~~a~~~Le~~y~~------------~~ms~eeai~la~~al~~~~~~d~~~ 206 (250)
T d1iruc_ 139 DKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKE------------GEMTLKSALALAIKVLNKTMDVSKLS 206 (250)
T ss_dssp ETTTEEEEEEEETTTEEEECSEEEESTTTTHHHHHHHHHCCT------------TCCCHHHHHHHHHHHHHHSSSCTTCC
T ss_pred cCCCCCEEEEEcccccEeeeeEEEeCcChHHHHHHHHhhccc------------CCCCHHHHHHHHHHHHHHHhcccCCC
Confidence 988889999999999999999999999999999999999985 37999999999999999999999999
Q ss_pred CCcEEEEEEcCCCe
Q 030109 160 GDKLEIVVLNKGGI 173 (183)
Q Consensus 160 g~~i~I~ii~k~g~ 173 (183)
+++++|++|++++.
T Consensus 207 ~~~iei~ii~~~~~ 220 (250)
T d1iruc_ 207 AEKVEIATLTRENG 220 (250)
T ss_dssp STTCEEEEEECCSS
T ss_pred CCeEEEEEEEcCCC
Confidence 99999999999985
No 11
>d1yarh1 d.153.1.4 (H:1-203) Proteasome beta subunit (catalytic) {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=100.00 E-value=7.7e-38 Score=244.03 Aligned_cols=156 Identities=27% Similarity=0.390 Sum_probs=148.8
Q ss_pred cccceeEEecCceEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCCceeeEEEEEEeCCC
Q 030109 4 FFYILTSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEG 83 (183)
Q Consensus 4 ~~~~ki~~I~~~i~~~~sG~~aD~~~l~~~~r~~~~~~~~~~~~~i~~~~la~~is~~ly~~r~~P~~v~~lvaG~D~~g 83 (183)
...+||++|++|++|+++|..+|++.++++++.+++.|++.++.+++++.++++++++++.+|.|||++++|+||+|+
T Consensus 29 ~~~~KI~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~p~~~~~lvaG~d~-- 106 (203)
T d1yarh1 29 KNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDT-- 106 (203)
T ss_dssp SCCCCEEEEETTEEEEEEECHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHTTTSCCCEEEEEEEESS--
T ss_pred CCcccEEEecCCeeeecCCCcchHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHhhccCCccceeEEEEEcC--
Confidence 457899999999999999999999999999999999999999999999999999999999988899999999999985
Q ss_pred ceEEEEEcCCCceeeeCeEEEcCChhhhHHHHHcccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCcE
Q 030109 84 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKL 163 (183)
Q Consensus 84 ~p~Ly~iD~~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~~~~~rd~~~g~~i 163 (183)
+|+||.+||+|++.+++++|+|+|++.++++||++|++ +||.+||++++++||+.+.+||+.+++++
T Consensus 107 ~p~l~~~d~~G~~~~~~~~a~G~g~~~~~~~L~~~~~~-------------~~s~eea~~l~~~~l~~~~~~d~~~~~~v 173 (203)
T d1yarh1 107 APHVFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYSE-------------KMTVDEGVDLVIRAISAAKQRDSASGGMI 173 (203)
T ss_dssp SEEEEEECTTCCEEEESEEEESTTHHHHHHHHHHHCCT-------------TCCHHHHHHHHHHHHHHHHHHCTTCCSCC
T ss_pred CCeeEecCCccceecccccccCCCcHHHHHHHHHhccC-------------CCCHHHHHHHHHHHHHHHHHhcCCCCCeE
Confidence 49999999999999999999999999999999999997 99999999999999999999999999999
Q ss_pred EEEEEcCC-CeE
Q 030109 164 EIVVLNKG-GIH 174 (183)
Q Consensus 164 ~I~ii~k~-g~~ 174 (183)
+|++|+++ |++
T Consensus 174 ~v~ii~~~~g~~ 185 (203)
T d1yarh1 174 DVAVITRKDGYV 185 (203)
T ss_dssp EEEEEETTTEEE
T ss_pred EEEEEECCCCEE
Confidence 99999865 543
No 12
>d1iru1_ d.153.1.4 (1:) Proteasome beta subunit (catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=1.6e-37 Score=242.39 Aligned_cols=176 Identities=45% Similarity=0.742 Sum_probs=164.3
Q ss_pred cccceeEEecCceEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCCceeeEEEEEEeCCC
Q 030109 4 FFYILTSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEG 83 (183)
Q Consensus 4 ~~~~ki~~I~~~i~~~~sG~~aD~~~l~~~~r~~~~~~~~~~~~~i~~~~la~~is~~ly~~r~~P~~v~~lvaG~D~~g 83 (183)
...+||++|++|++++++|..+|++.+.++++.+++.|++.++.+++++.+++++++.+|.++.+|++++++++|+|.++
T Consensus 38 ~~~~KI~~i~~~i~~~~aG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~ 117 (213)
T d1iru1_ 38 RDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEG 117 (213)
T ss_dssp SCCCCEEEEETTEEEEEEECHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHTTTTSCCCEEEEEEEECTTS
T ss_pred cccCEEEEcCCCEEEEecCccchHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHhhhcccccceEEEecCC
Confidence 34689999999999999999999999999999999999999999999999999999999998888999999999999999
Q ss_pred ceEEEEEcCCCceeeeCeEEEcCChhhhHHHHHcccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCcE
Q 030109 84 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKL 163 (183)
Q Consensus 84 ~p~Ly~iD~~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~~~~~rd~~~g~~i 163 (183)
+|++|.+||+|++..++++++|+|+++++++||+.|+.+.. ...+.++||++||++++++||..+.+||+.+++++
T Consensus 118 ~~~l~~~d~~g~~~~~~~~a~G~g~~~a~~~l~~~~~~~~~----~~~~~~~~s~~ea~~~~~~~l~~~~~~d~~sg~~~ 193 (213)
T d1iru1_ 118 KGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNM----QNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDAL 193 (213)
T ss_dssp CEEEEEECTTSCEEEESEEEEETTHHHHHHHHHHHTTCCSC----SSCCCCCCCHHHHHHHHHHHHHHHHHHBTTSCSEE
T ss_pred CcEEEecCCcceeeecCeeeecCccHHHHHHHHHhhcccch----hcccccCCCHHHHHHHHHHHHHHHHHhcCCCCCce
Confidence 99999999999999999999999999999999998874210 11234689999999999999999999999999999
Q ss_pred EEEEEcCCCeEEEeeeccCC
Q 030109 164 EIVVLNKGGIHREYMELRKD 183 (183)
Q Consensus 164 ~I~ii~k~g~~~~~~~~~~~ 183 (183)
+|++|+|+|++++++++|+|
T Consensus 194 ~v~~i~k~G~~~~~~~~r~D 213 (213)
T d1iru1_ 194 RICIVTKEGIREETVSLRKD 213 (213)
T ss_dssp EEEEEETTEEEEEEEECCCC
T ss_pred EEEEEeCCCEEEEEEeccCC
Confidence 99999999999999999998
No 13
>d1j2qh_ d.153.1.4 (H:) Proteasome beta subunit (catalytic) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=100.00 E-value=1.3e-37 Score=241.99 Aligned_cols=157 Identities=25% Similarity=0.423 Sum_probs=150.0
Q ss_pred ccceeEEecCceEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCCceeeEEEEEEeCCCc
Q 030109 5 FYILTSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGK 84 (183)
Q Consensus 5 ~~~ki~~I~~~i~~~~sG~~aD~~~l~~~~r~~~~~~~~~~~~~i~~~~la~~is~~ly~~r~~P~~v~~lvaG~D~~g~ 84 (183)
..+||++|+++++|+++|..+|++.+.++++.+++.|++.++.+++++.+++++++++|.+|.+||++++|+||+|+++
T Consensus 30 ~~~Ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~p~~~~~lvaG~d~~~- 108 (202)
T d1j2qh_ 30 AAKKIYQIADRMAMTTAGSVGDAQFLARIIKIEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEG- 108 (202)
T ss_dssp SCCCEEEEETTEEEEEEECHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHTTTSCCCEEEEEEEEETTE-
T ss_pred ccceEEEecCcEEEEecCcchhHHHHHHHHHHHhhhhhhccCCCccHHHHHHHHHHHHhhhcccceeeEEEEEEEcCCC-
Confidence 4689999999999999999999999999999999999999999999999999999999998889999999999999764
Q ss_pred eEEEEEcCCCceeee-CeEEEcCChhhhHHHHHcccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCcE
Q 030109 85 GCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKL 163 (183)
Q Consensus 85 p~Ly~iD~~G~~~~~-~~~a~G~gs~~~~~~Le~~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~~~~~rd~~~g~~i 163 (183)
|+||.+||+|++..+ .++|+|+|++.++++||++|++ +||.+||++++++||+.+.++|+.+++++
T Consensus 109 ~~l~~~d~~G~~~~~~~~~a~G~g~~~~~~~Le~~~~~-------------~ms~~ea~~l~~~al~~~~~~d~~~g~~v 175 (202)
T d1j2qh_ 109 KSIYSIDPIGGAIEEKDIVATGSGSLTAYGVLEDRFTP-------------EIGVDEAVELAVRAIYSAMKRDSASGDGI 175 (202)
T ss_dssp EEEEEECTTCCEEEESSEEEESTTHHHHHHHHHHHCCT-------------TCCHHHHHHHHHHHHHHHHTTCTTSCSCE
T ss_pred ceEEEEeCCCCeEeecceEEccCChHHHHHHHHhhcCC-------------CCCHHHHHHHHHHHHHHHHHhcCCCCCeE
Confidence 999999999998876 5999999999999999999997 99999999999999999999999999999
Q ss_pred EEEEEcCCCeEE
Q 030109 164 EIVVLNKGGIHR 175 (183)
Q Consensus 164 ~I~ii~k~g~~~ 175 (183)
+|++|+++|++.
T Consensus 176 ~v~~i~~~g~~~ 187 (202)
T d1j2qh_ 176 DVVKITEDEFYQ 187 (202)
T ss_dssp EEEEECSSCEEE
T ss_pred EEEEEECCCEEE
Confidence 999999999764
No 14
>d1irua_ d.153.1.4 (A:) Proteasome alpha subunit (non-catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=1.3e-37 Score=249.55 Aligned_cols=162 Identities=15% Similarity=0.169 Sum_probs=149.9
Q ss_pred ccceeEEecCceEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhh----hcCCCceeeEEEEEEe
Q 030109 5 FYILTSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYY----KRFFPYYSFNVLGGLD 80 (183)
Q Consensus 5 ~~~ki~~I~~~i~~~~sG~~aD~~~l~~~~r~~~~~~~~~~~~~i~~~~la~~is~~ly~----~r~~P~~v~~lvaG~D 80 (183)
..+||++|++|++|+++|..+|++.+.+++|.+++.|++.++++++++.+|+.++++++. .++|||+|++||||||
T Consensus 64 ~~~KI~~I~~~i~~~~sG~~~D~~~l~~~~r~~~~~~~~~~~~~~~v~~la~~l~~~~~~~t~~~~~rP~~v~~ll~G~D 143 (244)
T d1irua_ 64 TVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIGID 143 (244)
T ss_dssp GCCSEEESSSSCEEEEEECHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHBSSBCCCSEEEEEEEEE
T ss_pred ccceEEEecCCcEEEEecchHHHHHHHHHHHHHHHHHHHHcCCCCCchHHHHHHHHHHHHHhcccccCccceeeEEEEEc
Confidence 467999999999999999999999999999999999999999999999999999999854 2479999999999999
Q ss_pred CCCceEEEEEcCCCceeeeCeEEEcCChhhhHHHHHcccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccC
Q 030109 81 NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTG 160 (183)
Q Consensus 81 ~~g~p~Ly~iD~~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~~~~~rd~~~g 160 (183)
++++|+||++||+|++.+++++|+|+|+..++++||++|++ .++|+++||++++++||..+.++|. ++
T Consensus 144 ~~~g~~Ly~~Dp~G~~~~~~~~a~G~gs~~~~~~Le~~~~~-----------~~d~t~eeai~l~~~~l~~~~~~d~-~~ 211 (244)
T d1irua_ 144 EEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKK-----------KFDWTFEQTVETAITCLSTVLSIDF-KP 211 (244)
T ss_dssp TTTEEEEEEECTTSCEEEBSEEEEETTHHHHHHHHHHHTTS-----------CCCCCHHHHHHHHHHHHHHHTTCCC-CT
T ss_pred CCCCcEEEEEcCCccEEecceEeccCchhHHHHHHHhcccc-----------ccCCCHHHHHHHHHHHHHHHHhcCC-CC
Confidence 88789999999999999999999999999999999999975 2489999999999999999999996 45
Q ss_pred CcEEEEEEcCCCeEEEee
Q 030109 161 DKLEIVVLNKGGIHREYM 178 (183)
Q Consensus 161 ~~i~I~ii~k~g~~~~~~ 178 (183)
++++|+||++++...+.+
T Consensus 212 ~~iev~ii~~~~~~~~~l 229 (244)
T d1irua_ 212 SEIEVGVVTVENPKFRIL 229 (244)
T ss_dssp TSEEEEEEETTEEEEEEC
T ss_pred CcEEEEEEEeCCCcEEEC
Confidence 789999999998765554
No 15
>d1rypc_ d.153.1.4 (C:) Proteasome alpha subunit (non-catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=1.3e-37 Score=249.46 Aligned_cols=159 Identities=19% Similarity=0.220 Sum_probs=150.9
Q ss_pred CcccceeEEecCceEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhh--hc--CCCceeeEEEEE
Q 030109 3 SFFYILTSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYY--KR--FFPYYSFNVLGG 78 (183)
Q Consensus 3 ~~~~~ki~~I~~~i~~~~sG~~aD~~~l~~~~r~~~~~~~~~~~~~i~~~~la~~is~~ly~--~r--~~P~~v~~lvaG 78 (183)
+...+||++|++|++++++|..+|++.+++.++.+++.|+++++.+++++.+++.++++++. ++ +|||++++||||
T Consensus 59 ~~~~~KI~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~rP~~~~~ll~G 138 (244)
T d1rypc_ 59 DTSTEKLYKLNDKIAVAVAGLTADAEILINTARIHAQNYLKTYNEDIPVEILVRRLSDIKQGYTQHGGLRPFGVSFIYAG 138 (244)
T ss_dssp TTCCSSEEESSSSEEEEEEECHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHBSSCCCCCEEEEEEE
T ss_pred CCccceEEEcCCCeEEEEecccCcHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhhhhhccccCccceeEEEEE
Confidence 34578999999999999999999999999999999999999999999999999999999954 32 689999999999
Q ss_pred EeCCCceEEEEEcCCCceeeeCeEEEcCChhhhHHHHHcccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccc
Q 030109 79 LDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIY 158 (183)
Q Consensus 79 ~D~~g~p~Ly~iD~~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~~~~~rd~~ 158 (183)
+|++++|+||++||+|++.+++++|+|+|+..++++||+.|++ +|+++||++++++||..+.+||..
T Consensus 139 ~d~~~gp~Ly~id~~Gs~~~~~~~a~G~g~~~a~~~Le~~~~~-------------~ms~eeai~l~~~al~~a~~~d~~ 205 (244)
T d1rypc_ 139 YDDRYGYQLYTSNPSGNYTGWKAISVGANTSAAQTLLQMDYKD-------------DMKVDDAIELALKTLSKTTDSSAL 205 (244)
T ss_dssp EETTTEEEEEEECTTCCEEEBSEEEESTTHHHHHHHHHHHCCT-------------TCCHHHHHHHHHHHHHHHCSSSSC
T ss_pred EecCCCceEEEecCCCcEeeeeeeeccchhHHHHHHHHhcccC-------------CCCHHHHHHHHHHHHHHHHhccCC
Confidence 9988889999999999999999999999999999999999997 999999999999999999999999
Q ss_pred cCCcEEEEEEcCCCeE
Q 030109 159 TGDKLEIVVLNKGGIH 174 (183)
Q Consensus 159 ~g~~i~I~ii~k~g~~ 174 (183)
++++++|++|++++..
T Consensus 206 ~~~~iei~ii~~~~~~ 221 (244)
T d1rypc_ 206 TYDRLEFATIRKGAND 221 (244)
T ss_dssp CGGGEEEEEEECCSSS
T ss_pred CCCcEEEEEEECCCcc
Confidence 9999999999999863
No 16
>d1irug_ d.153.1.4 (G:) Proteasome alpha subunit (non-catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=2.3e-37 Score=248.32 Aligned_cols=155 Identities=12% Similarity=0.034 Sum_probs=146.3
Q ss_pred cccceeEEecCceEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhh--hc--CCCceeeEEEEEE
Q 030109 4 FFYILTSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYY--KR--FFPYYSFNVLGGL 79 (183)
Q Consensus 4 ~~~~ki~~I~~~i~~~~sG~~aD~~~l~~~~r~~~~~~~~~~~~~i~~~~la~~is~~ly~--~r--~~P~~v~~lvaG~ 79 (183)
...+||++|++|++|+++|+.+|++.++++++.+++.|+++++.+++++.+|++++++++. ++ +|||+|++|||||
T Consensus 61 ~~~~Ki~~I~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~g~~i~~~~la~~la~~~~~~t~~~~~rP~~vs~li~G~ 140 (245)
T d1irug_ 61 GSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSY 140 (245)
T ss_dssp TTTCCEEEEETTEEEEEEECHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHTTSBSSBCCCSEEEEEEEE
T ss_pred CccceEEEcCCCEEEEeccCchhHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhhccccccccceEEEEEEE
Confidence 3567999999999999999999999999999999999999999999999999999999854 33 6899999999999
Q ss_pred eCCCceEEEEEcCCCceeeeCeEEEcCChhhhHHHHHcccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcccc
Q 030109 80 DNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYT 159 (183)
Q Consensus 80 D~~g~p~Ly~iD~~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~~~~~rd~~~ 159 (183)
|++++|+||++||+|++.+++++|+|+|++.++++||+.|++ +||.+||++++++||..+.+++..+
T Consensus 141 D~~~gp~Ly~iDp~G~~~~~~~~a~G~gs~~a~~~Le~~~~~-------------dmt~eea~~l~~~~l~~~~~~~~~~ 207 (245)
T d1irug_ 141 SVNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMK-------------EMTCRDIVKEVAKIIYIVHDEVKDK 207 (245)
T ss_dssp ETTTEEEEEEECTTCCEEEBSEEEESTTHHHHHHHHTTSCGG-------------GCCHHHHHHHHHHHHHHHSCSSSSC
T ss_pred cCCCCceEEEEcCCceEEeeeEEEECCccHHHHHHHHhhcCC-------------CCCHHHHHHHHHHHHHHHHhhccCC
Confidence 988889999999999999999999999999999999999998 9999999999999999999888888
Q ss_pred CCcEEEEEEcCC
Q 030109 160 GDKLEIVVLNKG 171 (183)
Q Consensus 160 g~~i~I~ii~k~ 171 (183)
+.+++|.+|+++
T Consensus 208 ~~~iei~~v~~~ 219 (245)
T d1irug_ 208 AFELELSWVGEL 219 (245)
T ss_dssp CEEEEEEECBTT
T ss_pred CceEEEEEEEec
Confidence 889999999875
No 17
>d1ryp2_ d.153.1.4 (2:) Proteasome beta subunit (catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=4.2e-37 Score=244.62 Aligned_cols=160 Identities=14% Similarity=0.208 Sum_probs=148.1
Q ss_pred ccceeEEecCceEEEecCCHHHHHHHHHHHHHHHHHHHHhc-----CCCCCHHHHHHHHHHHHhhhc--CCCceeeEEEE
Q 030109 5 FYILTSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQH-----NKQMSCPGMAQLLSNTLYYKR--FFPYYSFNVLG 77 (183)
Q Consensus 5 ~~~ki~~I~~~i~~~~sG~~aD~~~l~~~~r~~~~~~~~~~-----~~~i~~~~la~~is~~ly~~r--~~P~~v~~lva 77 (183)
..+||++|++|++++++|..+|++.+.+.++.+++.|++++ +..++++.+++++++++|+++ ++||++++||+
T Consensus 38 ~~~KI~~i~~~i~~~~sG~~~D~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~y~~~~~~~P~~~~~lia 117 (233)
T d1ryp2_ 38 GVERLIPVGDNTVVGISGDISDMQHIERLLKDLVTENAYDNPLADAEEALEPSYIFEYLATVMYQRRSKMNPLWNAIIVA 117 (233)
T ss_dssp CCCCEEEETTTEEEEEEEEHHHHHHHHHHHHHHHHHHHTTCTTTTTTTSCCHHHHHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred CcceEEEeCCCEEEEeccCchHHHHHHHHHHHHHHHHHHhhCCCCCCcccCHHHHHHHHHHHHHhhccccCCceeEEEEE
Confidence 45899999999999999999999999999999999999876 578899999999999998864 78999999999
Q ss_pred EEeCCCceEEEEEcCCCceeeeCeEEEcCChhhhHHHHHcccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcc
Q 030109 78 GLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDI 157 (183)
Q Consensus 78 G~D~~g~p~Ly~iD~~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~~~~~rd~ 157 (183)
|+|++++|+||.+||+|++.+++++|+|+|+++++++||+.|+++. ..++|+.+||++++++||+.+.+||+
T Consensus 118 G~d~~g~~~ly~~d~~G~~~~~~~~a~G~g~~~a~~~Le~~~~~~~--------~~~~ms~eeA~~l~~~al~~~~~rD~ 189 (233)
T d1ryp2_ 118 GVQSNGDQFLRYVNLLGVTYSSPTLATGFGAHMANPLLRKVVDRES--------DIPKTTVQVAEEAIVNAMRVLYYRDA 189 (233)
T ss_dssp EECTTSCEEEEEEETTCCEECCSEEECTHHHHHHHHHHTTTCCSGG--------GGGGCCHHHHHHHHHHHHHHHHHHBT
T ss_pred EEcCCCCeEEEEEcCCCcEEeeeeEEecCccHHHHHHHHHHHhhcc--------cccccCHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999998410 01389999999999999999999999
Q ss_pred ccCCcEEEEEEcCCC
Q 030109 158 YTGDKLEIVVLNKGG 172 (183)
Q Consensus 158 ~~g~~i~I~ii~k~g 172 (183)
.++++++|++|+||+
T Consensus 190 ~sg~~i~i~~itkd~ 204 (233)
T d1ryp2_ 190 RSSRNFSLAIIDKNT 204 (233)
T ss_dssp TCCSEEEEEEEETTT
T ss_pred cCCCCEEEEEEECCC
Confidence 999999999999985
No 18
>d1rypa_ d.153.1.4 (A:) Proteasome alpha subunit (non-catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=2.7e-37 Score=247.38 Aligned_cols=165 Identities=18% Similarity=0.188 Sum_probs=149.7
Q ss_pred cccceeEEecCceEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhc----CCCceeeEEEEEE
Q 030109 4 FFYILTSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKR----FFPYYSFNVLGGL 79 (183)
Q Consensus 4 ~~~~ki~~I~~~i~~~~sG~~aD~~~l~~~~r~~~~~~~~~~~~~i~~~~la~~is~~ly~~r----~~P~~v~~lvaG~ 79 (183)
...+||++|++|++|+++|+.+|++.+.++++.+++.|++.++.+++++.++++++++++.++ .|||+|++||+||
T Consensus 58 ~~~~KI~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~ls~~~~~~~~~~~~rP~~v~~ll~G~ 137 (243)
T d1rypa_ 58 TTVSYIFCISRTIGMVVNGPIPDARNAALRAKAEAAEFRYKYGYDMPCDVLAKRMANLSQIYTQRAYMRPLGVILTFVSV 137 (243)
T ss_dssp GGCCSEEECSSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHBTTSCCCSCEEEEEEE
T ss_pred CcccceEecCCCEEEEEecCcHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhcccccCccceEEEEEE
Confidence 456799999999999999999999999999999999999999999999999999999985432 6899999999999
Q ss_pred eCCCceEEEEEcCCCceeeeCeEEEcCChhhhHHHHHcccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcccc
Q 030109 80 DNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYT 159 (183)
Q Consensus 80 D~~g~p~Ly~iD~~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~~~~~rd~~~ 159 (183)
|++++|+||++||+|++.+++++|+|+|+..++++||++|++... +...+++.+||++++++||..+.+||. +
T Consensus 138 D~~~g~~Ly~~Dp~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~~~------~~~~~~s~eeav~la~~~l~~~~~~d~-~ 210 (243)
T d1rypa_ 138 DEELGPSIYKTDPAGYYVGYKATATGPKQQEITTNLENHFKKSKI------DHINEESWEKVVEFAITHMIDALGTEF-S 210 (243)
T ss_dssp ETTTEEEEEEECTTSCEEEBSEEEESTTHHHHHHHHHHHHHHHCS------SSCCCSSHHHHHHHHHHHHHHHHTCCC-C
T ss_pred ccCCCCeEEEEcCCEEEEecceEEeCccHHHHHHHHHHHhhcccc------cccccccHHHHHHHHHHHHHHHhhccC-C
Confidence 988889999999999999999999999999999999999986110 112368999999999999999999996 7
Q ss_pred CCcEEEEEEcCCCeEE
Q 030109 160 GDKLEIVVLNKGGIHR 175 (183)
Q Consensus 160 g~~i~I~ii~k~g~~~ 175 (183)
+++++|++++++|++.
T Consensus 211 ~~~iei~iitk~g~~~ 226 (243)
T d1rypa_ 211 KNDLEVGVATKDKFFT 226 (243)
T ss_dssp TTSEEEEEEETTEEEE
T ss_pred CCcEEEEEEeCCceEE
Confidence 8899999999999754
No 19
>d1rypi_ d.153.1.4 (I:) Proteasome beta subunit (catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=1.1e-36 Score=240.90 Aligned_cols=155 Identities=21% Similarity=0.266 Sum_probs=147.5
Q ss_pred ccceeEEecCceEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCCceeeEEEEEEeCCCc
Q 030109 5 FYILTSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGK 84 (183)
Q Consensus 5 ~~~ki~~I~~~i~~~~sG~~aD~~~l~~~~r~~~~~~~~~~~~~i~~~~la~~is~~ly~~r~~P~~v~~lvaG~D~~g~ 84 (183)
..+||++|+++++|+++|..+|++.+.++++.+++.|++.++.++++..+++++++.+|.++ +||++++|+||+|++ +
T Consensus 30 ~~~KI~~I~~~i~~~~sG~~aD~~~l~~~l~~~~~~~~~~~~~~~~v~~~a~~l~~~~~~~~-~p~~~~~l~aG~d~~-g 107 (222)
T d1rypi_ 30 NCAKLHRISPKIWCAGAGTAADTEAVTQLIGSNIELHSLYTSREPRVVSALQMLKQHLFKYQ-GHIGAYLIVAGVDPT-G 107 (222)
T ss_dssp SCCCEEEEETTEEEEEEECHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTT-TCSCEEEEEEEEETT-E
T ss_pred CcccEEEEcCCEEEEecccchHHHHHHHHHHHHHHHhhhhhCCCCcHHHHHHHHHHHHHhhh-hccceeEEEEEEcCC-C
Confidence 45899999999999999999999999999999999999999999999999999999998765 699999999999975 5
Q ss_pred eEEEEEcCCCceeeeCeEEEcCChhhhHHHHHcccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCcEE
Q 030109 85 GCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLE 164 (183)
Q Consensus 85 p~Ly~iD~~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~~~~~rd~~~g~~i~ 164 (183)
|+||.+||+|++.+++++|+|+|+++++++||++|++ +||++||++++++||..+.+||+.++++++
T Consensus 108 ~~Ly~id~~G~~~~~~~~a~Gsg~~~a~~~Le~~~k~-------------~ms~eea~~l~~~al~~a~~~D~~sg~~i~ 174 (222)
T d1rypi_ 108 SHLFSIHAHGSTDVGYYLSLGSGSLAAMAVLESHWKQ-------------DLTKEEAIKLASDAIQAGIWNDLGSGSNVD 174 (222)
T ss_dssp EEEEEECTTSCEEECSEEEESTTHHHHHHHHHHHCCS-------------SCCHHHHHHHHHHHHHHHHHHCTTCCSCEE
T ss_pred cEEEEEecCcceEEeeEEEECCCcHHHHHHHHhhccC-------------CCCHHHHHHHHHHHHHHHhcccCCCCCcEE
Confidence 9999999999999999999999999999999999997 999999999999999999999999999999
Q ss_pred EEEEcCCCeE
Q 030109 165 IVVLNKGGIH 174 (183)
Q Consensus 165 I~ii~k~g~~ 174 (183)
|++|++++..
T Consensus 175 i~vi~~~~~~ 184 (222)
T d1rypi_ 175 VCVMEIGKDA 184 (222)
T ss_dssp EEEEETTSCE
T ss_pred EEEEEcCCCe
Confidence 9999987543
No 20
>d1rypf_ d.153.1.4 (F:) Proteasome alpha subunit (non-catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=2.5e-37 Score=246.32 Aligned_cols=160 Identities=14% Similarity=0.160 Sum_probs=147.0
Q ss_pred ccceeEEecCceEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhh--c--CCCceeeEEEEEEe
Q 030109 5 FYILTSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYK--R--FFPYYSFNVLGGLD 80 (183)
Q Consensus 5 ~~~ki~~I~~~i~~~~sG~~aD~~~l~~~~r~~~~~~~~~~~~~i~~~~la~~is~~ly~~--r--~~P~~v~~lvaG~D 80 (183)
..+||+.|++|++|++||+.+|++.+++++|.+++.|++.++++++++.+|+.++++++.+ . .|||++++||||||
T Consensus 58 ~~~KI~~I~~~i~~~~sG~~~D~~~l~~~~r~~~~~~~~~~~~~i~~~~la~~l~~~~~~~t~~~~~RP~gv~~il~G~d 137 (233)
T d1rypf_ 58 YQKKIIKCDEHMGLSLAGLAPDARVLSNYLRQQCNYSSLVFNRKLAVERAGHLLCDKAQKNTQSYGGRPYGVGLLIIGYD 137 (233)
T ss_dssp CCCCEEEEETTEEEEEEECHHHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHBTTCCCCCEEEEEEEEE
T ss_pred chheEEEcCCCEEEEEeeccccHHHHHHHHHHHHHhhhhhcCCCCcHHHHHHHHHHHHHHHhcccccCCccceEEEEEEc
Confidence 4579999999999999999999999999999999999999999999999999999999642 2 58999999999999
Q ss_pred CCCceEEEEEcCCCceeeeCeEEEcCChhhhHHHHHcccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccC
Q 030109 81 NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTG 160 (183)
Q Consensus 81 ~~g~p~Ly~iD~~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~~~~~rd~~~g 160 (183)
++| |+||++||+|++.+++++|+|+|++.++++||+.|++ .+.++|+++||++++++||..+.+||..++
T Consensus 138 ~~g-~~Ly~idp~G~~~~~~~~aiG~gs~~a~~~Le~~~~~---------~~~~dms~eeai~l~~~~l~~~~~~d~~~~ 207 (233)
T d1rypf_ 138 KSG-AHLLEFQPSGNVTELYGTAIGARSQGAKTYLERTLDT---------FIKIDGNPDELIKAGVEAISQSLRDESLTV 207 (233)
T ss_dssp TTE-EEEEEECTTSCEEEESEEEESTTHHHHHHHHHHHHHH---------HTTCCSCHHHHHHHHHHHHTTSCCSSCCCT
T ss_pred CCC-CEEEEEccccceecccEEEecCchHHHHHHHHHHHhh---------ccccCCCHHHHHHHHHHHHHHHHhccCCCC
Confidence 865 9999999999999999999999999999999987643 112489999999999999999999999999
Q ss_pred CcEEEEEEcCCCeE
Q 030109 161 DKLEIVVLNKGGIH 174 (183)
Q Consensus 161 ~~i~I~ii~k~g~~ 174 (183)
+++||++|+|++..
T Consensus 208 ~~iev~ii~k~~~~ 221 (233)
T d1rypf_ 208 DNLSIAIVGKDTPF 221 (233)
T ss_dssp TTEEEEEEETTEEE
T ss_pred CeEEEEEEECCCCe
Confidence 99999999998653
No 21
>d1rypb_ d.153.1.4 (B:) Proteasome alpha subunit (non-catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=2.6e-36 Score=242.56 Aligned_cols=155 Identities=16% Similarity=0.196 Sum_probs=145.3
Q ss_pred ccceeEEecCceEEEecCCHHHHHHHHHHHHHHHHH-HHHhcCCCCCHHHHHHHHHHHHhh--h--cCCCceeeEEEEEE
Q 030109 5 FYILTSCRADKCVMASSGFQADVKALQKLLAARHLI-YQHQHNKQMSCPGMAQLLSNTLYY--K--RFFPYYSFNVLGGL 79 (183)
Q Consensus 5 ~~~ki~~I~~~i~~~~sG~~aD~~~l~~~~r~~~~~-~~~~~~~~i~~~~la~~is~~ly~--~--r~~P~~v~~lvaG~ 79 (183)
..+||++|++|++|+++|..+|++.++++++.+++. |++.++.+++++.+++.++++++. + +.|||++++|||||
T Consensus 60 ~~~ki~~I~~~i~~~~sG~~~D~~~l~~~~~~~~~~~y~~~~~~~~~~~~la~~~~~~~~~~~~~~~~rp~~v~~li~G~ 139 (250)
T d1rypb_ 60 TLSKVSLLTPDIGAVYSGMGPDYRVLVDKSRKVAHTSYKRIYGEYPPTKLLVSEVAKIMQEATQSGGVRPFGVSLLIAGH 139 (250)
T ss_dssp GCCSSEEEETTEEEEEEECHHHHHHHHHHHHHHHHHTTHHHHSSCCCHHHHHHHHHHHHHHTTTSBTBCCCCEEEEEEEE
T ss_pred ccceeEeccCCEEEEeeecccHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhhcCCcCeeEEEEEEEe
Confidence 457999999999999999999999999999999875 899999999999999999999843 2 26899999999999
Q ss_pred eCCCceEEEEEcCCCceeeeCeEEEcCChhhhHHHHHcccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcccc
Q 030109 80 DNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYT 159 (183)
Q Consensus 80 D~~g~p~Ly~iD~~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~~~~~rd~~~ 159 (183)
|++++|+||++||+|++.+++++|+|+|++.++++||++|++ +|+++||++++++||+.+.++|. +
T Consensus 140 D~~~gp~Ly~id~~G~~~~~~~~a~G~gs~~a~~~Le~~~~~-------------~ms~eea~~la~~al~~~~~~d~-s 205 (250)
T d1rypb_ 140 DEFNGFSLYQVDPSGSYFPWKATAIGKGSVAAKTFLEKRWND-------------ELELEDAIHIALLTLKESVEGEF-N 205 (250)
T ss_dssp ETTTEEEEEEECTTSCEEEBSEEEESTTHHHHHHHHHHHCCT-------------TCCHHHHHHHHHHHHHHHCCSCC-S
T ss_pred cCCCCCEEEEEcCcEEEEEeeEEecCcchHHHHHHHHHhccc-------------CCCHHHHHHHHHHHHHHHhhccC-C
Confidence 987789999999999999999999999999999999999997 99999999999999999999995 7
Q ss_pred CCcEEEEEEcCCCe
Q 030109 160 GDKLEIVVLNKGGI 173 (183)
Q Consensus 160 g~~i~I~ii~k~g~ 173 (183)
+++++|++|++++.
T Consensus 206 ~~~iev~vi~~~~~ 219 (250)
T d1rypb_ 206 GDTIELAIIGDENP 219 (250)
T ss_dssp TTTEEEEEECSCCG
T ss_pred CCCEEEEEEeCCCc
Confidence 89999999999875
No 22
>d1yara1 d.153.1.4 (A:13-233) Proteasome alpha subunit (non-catalytic) {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=100.00 E-value=5.1e-36 Score=236.75 Aligned_cols=154 Identities=19% Similarity=0.225 Sum_probs=143.9
Q ss_pred ccceeEEecCceEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhc----CCCceeeEEEEEEe
Q 030109 5 FYILTSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKR----FFPYYSFNVLGGLD 80 (183)
Q Consensus 5 ~~~ki~~I~~~i~~~~sG~~aD~~~l~~~~r~~~~~~~~~~~~~i~~~~la~~is~~ly~~r----~~P~~v~~lvaG~D 80 (183)
..+||++|++|++++++|+.+|++.+.++++.+++.|++.++++++++.+++.++.+++..+ +|||++++||||||
T Consensus 51 ~~~Ki~~I~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~~~~~~~~~~rP~~~~~li~G~d 130 (221)
T d1yara1 51 SIEKIQLIDDYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGID 130 (221)
T ss_dssp TCCSEEEEETTEEEEEEEBHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHTTTBTTBCCCCEEEEEEEEC
T ss_pred ccceEEEecCCceEEeeeccchHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhhhccCCCcceEEEEEEEe
Confidence 45799999999999999999999999999999999999999999999999999999996532 68999999999999
Q ss_pred CCCceEEEEEcCCCceeeeCeEEEcCChhhhHHHHHcccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccC
Q 030109 81 NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTG 160 (183)
Q Consensus 81 ~~g~p~Ly~iD~~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~~~~~rd~~~g 160 (183)
++ +|+||++||+|++.+++++|+|+|+..++++||++|++ +||.+||++++.+||+.+.++|. ++
T Consensus 131 ~~-gp~Ly~id~~G~~~~~~~~a~G~g~~~~~~~Le~~~~~-------------~ms~~ea~~la~~~l~~~~~~~~-~~ 195 (221)
T d1yara1 131 QI-GPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKE-------------NLPEKEAVTLGIKALKSSLEEGE-EL 195 (221)
T ss_dssp SS-CEEEEEECTTCCEEEBSEEEESTTHHHHHHHHHHHCCT-------------TCCHHHHHHHHHHHHHHTSCSSC-CC
T ss_pred cC-CCeEEEEcCCccEEEeeEEEECCchHHHHHHHHHHhhc-------------cccHHHHHHHHHHHHHHHHhccC-CC
Confidence 75 59999999999999999999999999999999999997 99999999999999999998875 67
Q ss_pred CcEEEEEEcCCCe
Q 030109 161 DKLEIVVLNKGGI 173 (183)
Q Consensus 161 ~~i~I~ii~k~g~ 173 (183)
++++|++|++++.
T Consensus 196 ~~~ei~~i~~~~~ 208 (221)
T d1yara1 196 KAPEIASITVGNK 208 (221)
T ss_dssp CCCEEEEEETTSC
T ss_pred CCcEEEEEEcCCC
Confidence 7999999998654
No 23
>d1irue_ d.153.1.4 (E:) Proteasome alpha subunit (non-catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=2.9e-36 Score=240.11 Aligned_cols=154 Identities=18% Similarity=0.156 Sum_probs=143.3
Q ss_pred cccceeEEecCceEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhh---------cCCCceeeE
Q 030109 4 FFYILTSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYK---------RFFPYYSFN 74 (183)
Q Consensus 4 ~~~~ki~~I~~~i~~~~sG~~aD~~~l~~~~r~~~~~~~~~~~~~i~~~~la~~is~~ly~~---------r~~P~~v~~ 74 (183)
...+||++|++|++++++|+.+|++.+++.++.++..|++.++++++++.+++++++++|.. +.|||+|++
T Consensus 55 ~~~~KI~~I~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~i~~~~la~~i~~~~~~~t~~~~~~~~~~rP~~~~~ 134 (234)
T d1irue_ 55 SSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVAL 134 (234)
T ss_dssp TSCCSEEEEETTEEEEEEECHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHTTTTCBCSTTCCSSCBSSCCCEEE
T ss_pred CcccCEEEccCcEEEEEeeccchHHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhcccccccccccceEEE
Confidence 34579999999999999999999999999999999999999999999999999999998531 268999999
Q ss_pred EEEEEeCCCceEEEEEcCCCceeeeCeEEEcCChhhhHHHHHcccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHh
Q 030109 75 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 154 (183)
Q Consensus 75 lvaG~D~~g~p~Ly~iD~~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~~~~~ 154 (183)
|+||||++ +|+||++||+|++.+++++|+|+|++.++++||++|++ +|+++||++++++||+.+.+
T Consensus 135 il~G~D~~-gp~Ly~idp~G~~~~~~~~a~G~gs~~~~~~Le~~~~~-------------~~~~eeai~~a~~al~~~~~ 200 (234)
T d1irue_ 135 LFGGVDEK-GPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQELYHK-------------SMTLKEAIKSSLIILKQVME 200 (234)
T ss_dssp EEEEEETT-EEEEEEECTTSCEEEBSEEEESTTHHHHHHHHHHHCCT-------------TCCHHHHHHHHHHHHHHHCS
T ss_pred EEEEEcCC-CCEEEEEecCcccceeeeEEeCCchHHHHHHHHHhhcc-------------CCCHHHHHHHHHHHHHHHHh
Confidence 99999975 59999999999999999999999999999999999997 99999999999999999988
Q ss_pred hccccCCcEEEEEEcCCC
Q 030109 155 RDIYTGDKLEIVVLNKGG 172 (183)
Q Consensus 155 rd~~~g~~i~I~ii~k~g 172 (183)
+| .++++++|++|+++.
T Consensus 201 ~~-~~~~~iei~ii~~~~ 217 (234)
T d1irue_ 201 EK-LNATNIELATVQPGQ 217 (234)
T ss_dssp SC-CCTTSEEEEEECSSS
T ss_pred cc-CCCCCEEEEEEECCC
Confidence 87 467899999999864
No 24
>d1iru2_ d.153.1.4 (2:) Proteasome beta subunit (catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=8.4e-36 Score=234.69 Aligned_cols=160 Identities=22% Similarity=0.311 Sum_probs=149.0
Q ss_pred ccceeEEecCceEEEecCCHHHHHHHHHHHHHHHHHHHH-hcCCCCCHHHHHHHHHHHHhhhc--CCCceeeEEEEEEeC
Q 030109 5 FYILTSCRADKCVMASSGFQADVKALQKLLAARHLIYQH-QHNKQMSCPGMAQLLSNTLYYKR--FFPYYSFNVLGGLDN 81 (183)
Q Consensus 5 ~~~ki~~I~~~i~~~~sG~~aD~~~l~~~~r~~~~~~~~-~~~~~i~~~~la~~is~~ly~~r--~~P~~v~~lvaG~D~ 81 (183)
..+||++|+++++++++|..+|++.+.+.++.++..|++ .++.+++++.+++++++++|+++ .+||++++|++|+|+
T Consensus 38 ~~~KI~~i~~~i~~~~sG~~aD~~~l~~~~~~~~~~~~~~~~~~~~~v~~~a~~l~~~~y~~~~~~~p~~~~~li~G~d~ 117 (217)
T d1iru2_ 38 NISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYAD 117 (217)
T ss_dssp SCCCEEEETTTEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCSSCCCCHHHHHHHHHHHHHHHHHTTCCCCEEEEEEEEET
T ss_pred CcceEEEeCCCeEEEeccccHHHHHHHHHHHHHHHHhhhhcCCCCCCHHHHHHHHHHHHHHhccccCcccceEEEEEEcC
Confidence 468999999999999999999999999999999988776 56799999999999999999876 789999999999995
Q ss_pred CCceEEEEEcCCCceeeeCeEEEcCChhhhHHHHHcccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCC
Q 030109 82 EGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGD 161 (183)
Q Consensus 82 ~g~p~Ly~iD~~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~~~~~rd~~~g~ 161 (183)
++|+||.+||+|++.+++++|+|+|+.+++++||+.|+. .++||.+||++++++||+.+.+||+.+++
T Consensus 118 -~~~~l~~~D~~G~~~~~~~~a~G~g~~~a~~~Le~~~~~-----------~~~lt~~ea~~l~~~al~~a~~rd~~sg~ 185 (217)
T d1iru2_ 118 -GESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEK-----------QPVLSQTEARDLVERCMRVLYYRDARSYN 185 (217)
T ss_dssp -TEEEEEEECSSCCEEECSEEECTTHHHHTHHHHHHHHTS-----------CSCCCHHHHHHHHHHHHHHHHHHBTTCCS
T ss_pred -CCcEEEEEecCceeEeeeEEeccCcHHHHHHHHHHHhcc-----------cCCCCHHHHHHHHHHHHHHHHHhcCcCCC
Confidence 569999999999999999999999999999999998764 24899999999999999999999999999
Q ss_pred cEEEEEEcCCCeEEE
Q 030109 162 KLEIVVLNKGGIHRE 176 (183)
Q Consensus 162 ~i~I~ii~k~g~~~~ 176 (183)
+++|++|+++|+++.
T Consensus 186 ~i~i~vi~~~G~~~~ 200 (217)
T d1iru2_ 186 RFQTATVTEKGVEIE 200 (217)
T ss_dssp CEEEEEEETTEEEEE
T ss_pred cEEEEEEeCCCEEEc
Confidence 999999999999754
No 25
>d1rype_ d.153.1.4 (E:) Proteasome alpha subunit (non-catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=3.1e-36 Score=240.93 Aligned_cols=156 Identities=17% Similarity=0.161 Sum_probs=144.7
Q ss_pred ccceeEEecCceEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhh----------cCCCceeeE
Q 030109 5 FYILTSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYK----------RFFPYYSFN 74 (183)
Q Consensus 5 ~~~ki~~I~~~i~~~~sG~~aD~~~l~~~~r~~~~~~~~~~~~~i~~~~la~~is~~ly~~----------r~~P~~v~~ 74 (183)
..+||++|+++++|+++|..+|++.+.++++.+++.|+++++++++++.++++++++++.. ++|||+|++
T Consensus 55 ~~~Ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~rP~~~~~ 134 (242)
T d1rype_ 55 SIEKIVEIDRHIGCAMSGLTADARSMIEHARTAAVTHNLYYDEDINVESLTQSVCDLALRFGEGASGEERLMSRPFGVAL 134 (242)
T ss_dssp GCCCEEEEETTEEEEEEESGGGHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHTTTTCCBSSCTTSCCCBSSCCSEEE
T ss_pred ccceEEEcCCCEEEEEeecchhHHHHHHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHhccccccchhccccceEEE
Confidence 3579999999999999999999999999999999999999999999999999999988531 258999999
Q ss_pred EEEEEeCCCceEEEEEcCCCceeeeCeEEEcCChhhhHHHHHcccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHh
Q 030109 75 VLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 154 (183)
Q Consensus 75 lvaG~D~~g~p~Ly~iD~~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~~~~~ 154 (183)
||+|+|++++|+||++||+|++.+++++|+|+|++.++++||++|++ +||++||++++++||..+.+
T Consensus 135 ii~G~D~~~~p~L~~idp~G~~~~~~~~a~G~gs~~~~~~Le~~~~~-------------~ms~~ea~~la~~~l~~~~~ 201 (242)
T d1rype_ 135 LIAGHDADDGYQLFHAEPSGTFYRYNAKAIGSGSEGAQAELLNEWHS-------------SLTLKEAELLVLKILKQVME 201 (242)
T ss_dssp EEEEEETTTEEEEEEECTTSCEEEBSEEEESTTHHHHHHHHHHHCCT-------------TCCHHHHHHHHHHHHHHHCS
T ss_pred EEEEeccccceEEEEEcCCCceeccceeecccchHHHHHHHHHhccC-------------CCCHHHHHHHHHHHHHHHHh
Confidence 99999988889999999999999999999999999999999999997 99999999999999999999
Q ss_pred hccccCCcEEEEEEcC-CCeE
Q 030109 155 RDIYTGDKLEIVVLNK-GGIH 174 (183)
Q Consensus 155 rd~~~g~~i~I~ii~k-~g~~ 174 (183)
+|. +.++++|++|++ +|++
T Consensus 202 ~~~-~~~~~~v~~i~~~~g~~ 221 (242)
T d1rype_ 202 EKL-DENNAQLSCITKQDGFK 221 (242)
T ss_dssp SCC-CTTSEEEEEEETTTEEE
T ss_pred ccC-CCCceEEEEEECCCCeE
Confidence 886 456899999986 5654
No 26
>d1j2pa_ d.153.1.4 (A:) Proteasome alpha subunit (non-catalytic) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=100.00 E-value=1.5e-35 Score=237.23 Aligned_cols=153 Identities=14% Similarity=0.169 Sum_probs=143.4
Q ss_pred ccceeEEecCceEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhc----CCCceeeEEEEEEe
Q 030109 5 FYILTSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKR----FFPYYSFNVLGGLD 80 (183)
Q Consensus 5 ~~~ki~~I~~~i~~~~sG~~aD~~~l~~~~r~~~~~~~~~~~~~i~~~~la~~is~~ly~~r----~~P~~v~~lvaG~D 80 (183)
..+||++|+++++|+++|..+|++.++++++.+++.|+++++.+++++.+++.++++++..+ .|||+|++|+||+|
T Consensus 60 ~~~KI~~I~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~rP~~~~~il~G~D 139 (243)
T d1j2pa_ 60 TIEKIYKIDEHICAATSGLVADARVLIDRARIEAQINRLTYDIPITVKELAKKICDFKQQYTQYGGVRPFGVSLLIAGVN 139 (243)
T ss_dssp GCCSEEECSSSEEEEEEECHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHTTSBTTBCCCCEEEEEEEES
T ss_pred ccccEeecCCcEEEEeeecccHHHHHHHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHHHHhhhccCCccceeEEEEEec
Confidence 45799999999999999999999999999999999999999999999999999999997533 58999999999998
Q ss_pred CCCceEEEEEcCCCceeeeCeEEEcCChhhhHHHHHcccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccC
Q 030109 81 NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTG 160 (183)
Q Consensus 81 ~~g~p~Ly~iD~~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~~~~~rd~~~g 160 (183)
+ +|+||++||+|++.+++++|+|+|++.++++||+.|++ +||++||++++++||+.+.++|.. +
T Consensus 140 ~--~p~Ly~~Dp~G~~~~~~~~a~G~g~~~a~~~Le~~y~~-------------~ms~eeai~la~~~l~~~~~~d~~-~ 203 (243)
T d1j2pa_ 140 E--VPKLYETDPSGALLEYKATAIGMGRMAVTEFFEKEYRD-------------DLSFDDAMVLGLVAMGLSIESELV-P 203 (243)
T ss_dssp S--SEEEEEECTTCCEEEBSEEEESTTHHHHHHHHHHHCCT-------------TCCHHHHHHHHHHHHHHHHTSCCC-G
T ss_pred C--CceEEEEeccCceeeeeEEEeCCCcHHHHHHHHhhccc-------------CCCHHHHHHHHHHHHHHHHhcccC-C
Confidence 4 49999999999999999999999999999999999997 999999999999999999999975 5
Q ss_pred CcEEEEEEcCCCe
Q 030109 161 DKLEIVVLNKGGI 173 (183)
Q Consensus 161 ~~i~I~ii~k~g~ 173 (183)
+++||+++++++.
T Consensus 204 ~~iei~iv~~~~~ 216 (243)
T d1j2pa_ 204 ENIEVGYVKVDDR 216 (243)
T ss_dssp GGEEEEEEETTTC
T ss_pred CceEEEEEEeCCC
Confidence 6999999998754
No 27
>d1iruk_ d.153.1.4 (K:) Proteasome beta subunit (catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=1.3e-35 Score=228.25 Aligned_cols=166 Identities=19% Similarity=0.295 Sum_probs=155.7
Q ss_pred cccceeEEecCceEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhc--CCCceeeEEEEEEeC
Q 030109 4 FFYILTSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKR--FFPYYSFNVLGGLDN 81 (183)
Q Consensus 4 ~~~~ki~~I~~~i~~~~sG~~aD~~~l~~~~r~~~~~~~~~~~~~i~~~~la~~is~~ly~~r--~~P~~v~~lvaG~D~ 81 (183)
...+||++|+++++++++|..+|++.+.++++.+++.|+..++.+++++.+++.+++.+|.++ .+|++++++++|+|+
T Consensus 30 ~~~~Ki~~i~~~i~~~~~G~~aD~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~aG~d~ 109 (199)
T d1iruk_ 30 DDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDE 109 (199)
T ss_dssp SSCCCEEECSSSEEEEEEESTTHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHHTSSSCCCEEEEEEEEET
T ss_pred CCcceEEEecCcEEEEecccchHHHHHHHHHHHHhhhhhhhcCCcCcHHHHHHHHHHHHHHHhhccCCcceeeeecceec
Confidence 356899999999999999999999999999999999999999999999999999999987643 679999999999999
Q ss_pred CCceEEEEEcCCCceeeeCeEEEcCChhhhHHHHHcccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCC
Q 030109 82 EGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGD 161 (183)
Q Consensus 82 ~g~p~Ly~iD~~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~~~~~rd~~~g~ 161 (183)
+++|+||.+||.|.+.+.+++++|+|+++++++|++.|++ +|+++||++++++||+.+.+||+.+++
T Consensus 110 ~~~~~l~~~~~~g~~~~~~~~a~G~gs~~a~~~l~~~~~~-------------~~~~~ea~~l~~~al~~~~~~d~~sg~ 176 (199)
T d1iruk_ 110 HEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTP-------------TISRERAVELLRKCLEELQKRFILNLP 176 (199)
T ss_dssp TTEEEEEEECTTCCEEECSEEEESHHHHHHHHHHHHHCCT-------------TCCHHHHHHHHHHHHHHHHHTBCBCCC
T ss_pred cCCceEEeecccceEEeeeeeeecccchhhhHHHHHhccC-------------CCCHHHHHHHHHHHHHHHHHhcCCcCC
Confidence 8889999999999999999999999999999999999997 999999999999999999999999999
Q ss_pred cEEEEEEcCCCeEE-EeeeccC
Q 030109 162 KLEIVVLNKGGIHR-EYMELRK 182 (183)
Q Consensus 162 ~i~I~ii~k~g~~~-~~~~~~~ 182 (183)
+++|++|+++|+++ ..+.++.
T Consensus 177 ~~~v~vv~~~g~~~~~~~~~~~ 198 (199)
T d1iruk_ 177 TFSVRIIDKNGIHDLDNISFPK 198 (199)
T ss_dssp CEEEEEEETTEEECCCCBCCCC
T ss_pred ceEEEEEcCCCeEEcCCccCCC
Confidence 99999999999975 4455554
No 28
>d1rypd_ d.153.1.4 (D:) Proteasome alpha subunit (non-catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=5.5e-35 Score=233.67 Aligned_cols=157 Identities=15% Similarity=0.204 Sum_probs=143.9
Q ss_pred cccceeEEecCceEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhc----CCCceeeEEEEEE
Q 030109 4 FFYILTSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKR----FFPYYSFNVLGGL 79 (183)
Q Consensus 4 ~~~~ki~~I~~~i~~~~sG~~aD~~~l~~~~r~~~~~~~~~~~~~i~~~~la~~is~~ly~~r----~~P~~v~~lvaG~ 79 (183)
...+||++|++|++|++||..+|++.++++++.+++.|+++++++++++.++++++++++.++ +|||+|++|||||
T Consensus 57 ~~~~KI~~I~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~i~~~~la~~i~~~~~~~t~~~~~rP~~v~~li~G~ 136 (241)
T d1rypd_ 57 ITPSKVSKIDSHVVLSFSGLNADSRILIEKARVEAQSHRLTLEDPVTVEYLTRYVAGVQQRYTQSGGVRPFGVSTLIAGF 136 (241)
T ss_dssp TSCCSEEEEETTEEEEEEECHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHTTSSTTBCCCSEEEEEEEC
T ss_pred cccccEEEeCCCEEEEeeeccchHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhhccccCcccceEEEEEE
Confidence 355799999999999999999999999999999999999999999999999999999996532 6899999999999
Q ss_pred eCC-CceEEEEEcCCCceeeeCeEEEcCChhhhHHHHHcccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccc
Q 030109 80 DNE-GKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIY 158 (183)
Q Consensus 80 D~~-g~p~Ly~iD~~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~~~~~rd~~ 158 (183)
|++ ++|+||++||+|++.+++++|+|+|++.++++||+.|+++ .++|+++||++++++||..+.+++
T Consensus 137 d~~~~~p~Ly~idp~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~----------~~~~t~~e~i~lal~al~~~~~~~-- 204 (241)
T d1rypd_ 137 DPRDDEPKLYQTEPSGIYSSWSAQTIGRNSKTVREFLEKNYDRK----------EPPATVEECVKLTVRSLLEVVQTG-- 204 (241)
T ss_dssp CTTCCSCEEEEECTTSCEEEBSEEEESTTHHHHHHHHHTTCCTT----------SCCCSHHHHHHHHHHHHHHHHCSC--
T ss_pred ccccCcceEEEecCCEEEEeeCeEEECcCHHHHHHHHHHhhhcc----------cCCCCHHHHHHHHHHHHHHHhcCC--
Confidence 964 6799999999999999999999999999999999999862 247999999999999999988754
Q ss_pred cCCcEEEEEEcCCCe
Q 030109 159 TGDKLEIVVLNKGGI 173 (183)
Q Consensus 159 ~g~~i~I~ii~k~g~ 173 (183)
+++++|+|+++++-
T Consensus 205 -~~~iei~ii~~d~~ 218 (241)
T d1rypd_ 205 -AKNIEITVVKPDSD 218 (241)
T ss_dssp -STTEEEEEEETTTE
T ss_pred -CCcEEEEEEECCCC
Confidence 67999999999864
No 29
>d1iruf_ d.153.1.4 (F:) Proteasome alpha subunit (non-catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=1.7e-35 Score=236.29 Aligned_cols=157 Identities=13% Similarity=0.131 Sum_probs=143.5
Q ss_pred ccceeEEecCceEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHH--hhhc--CCCceeeEEEEEEe
Q 030109 5 FYILTSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTL--YYKR--FFPYYSFNVLGGLD 80 (183)
Q Consensus 5 ~~~ki~~I~~~i~~~~sG~~aD~~~l~~~~r~~~~~~~~~~~~~i~~~~la~~is~~l--y~~r--~~P~~v~~lvaG~D 80 (183)
..+||++|+++++|++||+.+|++.++++++.+++.|+++++.+++++.+++.+++++ |.++ .|||++++||||||
T Consensus 56 ~~~KI~~I~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~~y~~~~~~rP~~v~~il~G~D 135 (238)
T d1iruf_ 56 HQKKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYD 135 (238)
T ss_dssp CCCCEEEEETTEEEEEEECHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHBTTCCCCCEEEEEEEEE
T ss_pred ccceEEEeCCceEEEEeccchHHHHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHHHhhccCCCcccceEEEEEEc
Confidence 4579999999999999999999999999999999999999999999999999999986 4444 58999999999999
Q ss_pred CCCceEEEEEcCCCceeeeCeEEEcCChhhhHHHHHcccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhc-ccc
Q 030109 81 NEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERD-IYT 159 (183)
Q Consensus 81 ~~g~p~Ly~iD~~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~~~~~rd-~~~ 159 (183)
++ ||+||++||+|++.+++++|+|+|++.++++||++|++ ..+++++||++++++||..++.+| ..+
T Consensus 136 ~~-gp~Ly~~D~~G~~~~~~~~a~G~g~~~~~~~Lek~~~~-----------~~~~~~~eav~lai~al~~~~~~~~~~~ 203 (238)
T d1iruf_ 136 DM-GPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSE-----------FMECNLNELVKHGLRALRETLPAEQDLT 203 (238)
T ss_dssp TT-EEEEEEECSSSCEEEESEEEESTTHHHHHHHHHHHHHH-----------HTTCCHHHHHHHHHHHHHTTSCTTCCCC
T ss_pred CC-CceEEEEcCCCCEEeeeeEEECCCchhhHHHHHhhccc-----------ccCCCHHHHHHHHHHHHHHHHhhcccCC
Confidence 75 59999999999999999999999999999999999997 124699999999999999988765 458
Q ss_pred CCcEEEEEEcCCCe
Q 030109 160 GDKLEIVVLNKGGI 173 (183)
Q Consensus 160 g~~i~I~ii~k~g~ 173 (183)
+.+|+|++|++++.
T Consensus 204 ~~~iev~ii~k~~~ 217 (238)
T d1iruf_ 204 TKNVSIGIVGKDLE 217 (238)
T ss_dssp TTTEEEEEEETTEE
T ss_pred CCcEEEEEEeCCCC
Confidence 88999999999853
No 30
>d1rypg_ d.153.1.4 (G:) Proteasome alpha subunit (non-catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=4.4e-35 Score=234.72 Aligned_cols=151 Identities=19% Similarity=0.185 Sum_probs=141.7
Q ss_pred cceeEEecCceEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhc----CCCceeeEEEEEEeC
Q 030109 6 YILTSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKR----FFPYYSFNVLGGLDN 81 (183)
Q Consensus 6 ~~ki~~I~~~i~~~~sG~~aD~~~l~~~~r~~~~~~~~~~~~~i~~~~la~~is~~ly~~r----~~P~~v~~lvaG~D~ 81 (183)
.+||++|++|++|+++|..+|++.++++++.+++.|++.++++++++.+++.++++++.++ .|||++++||||||+
T Consensus 60 ~~KI~~I~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~t~~~~~RP~~~~~iiaG~D~ 139 (244)
T d1rypg_ 60 NVKIQVVDRHIGCVYSGLIPDGRHLVNRGREEAASFKKLYKTPIPIPAFADRLGQYVQAHTLYNSVRPFGVSTIFGGVDK 139 (244)
T ss_dssp SCCCEEETTTEEEEEEECHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHTTSCTTBCCCCEEEEEEEEET
T ss_pred cceEEEccCceEEEEccchhhHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhhcccccCCceEEEEEEEEeC
Confidence 4699999999999999999999999999999999999999999999999999999996543 589999999999997
Q ss_pred CCceEEEEEcCCCceeeeCeEEEcCChhhhHHHHHc---ccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccc
Q 030109 82 EGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDN---QLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIY 158 (183)
Q Consensus 82 ~g~p~Ly~iD~~G~~~~~~~~a~G~gs~~~~~~Le~---~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~~~~~rd~~ 158 (183)
+ +|+||++||+|++.+++++|+|+|+..++++||+ .|++ +||++||++++++||..+.+++..
T Consensus 140 ~-gp~Ly~idp~Gs~~~~~~~a~G~gs~~~~~~Lek~~~~~~~-------------~mt~eeai~la~~~L~~~~~~~~~ 205 (244)
T d1rypg_ 140 N-GAHLYMLEPSGSYWGYKGAATGKGRQSAKAELEKLVDHHPE-------------GLSAREAVKQAAKIIYLAHEDNKE 205 (244)
T ss_dssp T-EEEEEEECTTSCEEEBSEEEESTTHHHHHHHHHHHHHHCTT-------------CCCHHHHHHHHHHHHHHHGGGGTT
T ss_pred C-CCEEEEEcCCccEEecCeEecCCccHHHHHHHHHHHhhCCC-------------CCCHHHHHHHHHHHHHHHHhcccC
Confidence 5 5999999999999999999999999999999996 5776 999999999999999999999888
Q ss_pred cCCcEEEEEEcC
Q 030109 159 TGDKLEIVVLNK 170 (183)
Q Consensus 159 ~g~~i~I~ii~k 170 (183)
++.+++|.+|+.
T Consensus 206 ~~~~iev~ii~~ 217 (244)
T d1rypg_ 206 KDFELEISWCSL 217 (244)
T ss_dssp SCEEEEEEEEET
T ss_pred CCCeEEEEEEEE
Confidence 888999999974
No 31
>d1irud_ d.153.1.4 (D:) Proteasome alpha subunit (non-catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=6.4e-35 Score=233.56 Aligned_cols=153 Identities=15% Similarity=0.232 Sum_probs=139.1
Q ss_pred cccceeEEecCceEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhh--hc--CCCceeeEEEEEE
Q 030109 4 FFYILTSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYY--KR--FFPYYSFNVLGGL 79 (183)
Q Consensus 4 ~~~~ki~~I~~~i~~~~sG~~aD~~~l~~~~r~~~~~~~~~~~~~i~~~~la~~is~~ly~--~r--~~P~~v~~lvaG~ 79 (183)
...+||++|+++++|++||+.+|++.++++++.+++.|+++++.+++++.+|++++++++. ++ .|||++++||+||
T Consensus 56 ~~~~KI~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~i~v~~la~~ls~~~~~~t~~~~~rp~~v~~li~G~ 135 (243)
T d1irud_ 56 RTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGF 135 (243)
T ss_dssp GGGCSEEESSSSCEEEEEECHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHTTSBTTBCCCCEEEEEEEE
T ss_pred CccccEEECCCCEEEEEEEchhhHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHhcccCCccceEEEEEEE
Confidence 4567999999999999999999999999999999999999999999999999999999854 22 6899999999999
Q ss_pred eCCCceEEEEEcCCCceeeeCeEEEcCChhhhHHHHHcccCCCCCCCCCCCCCCCCC--CHHHHHHHHHHHHHHHHhhcc
Q 030109 80 DNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPL--SEAEAVDLVKTCFASATERDI 157 (183)
Q Consensus 80 D~~g~p~Ly~iD~~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~~~~~~~~~~~~~~l--s~~eA~~l~~~al~~~~~rd~ 157 (183)
|++++|+||++||+|++.+++++|+|+|+..++++||+.|++ +| +.++|+++++++|.....
T Consensus 136 D~~~~p~Ly~idp~G~~~~~~~~a~G~gs~~a~~~Lek~~~~-------------~~~~~~~~~i~~ai~~l~~~~~--- 199 (243)
T d1irud_ 136 DFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTD-------------EAIETDDLTIKLVIKALLEVVQ--- 199 (243)
T ss_dssp CSSSCEEEEEECTTSCEEEBSEEEESTTHHHHHHHHTTTCCS-------------STTCSHHHHHHHHHHHHHTTSC---
T ss_pred cCCCCCEEEEecCcEEEEeccEEEECCChHHHHHHHHHhccc-------------CCCccHHHHHHHHHHHHHHHhc---
Confidence 988889999999999999999999999999999999999997 55 778888888888776554
Q ss_pred ccCCcEEEEEEcCCC
Q 030109 158 YTGDKLEIVVLNKGG 172 (183)
Q Consensus 158 ~~g~~i~I~ii~k~g 172 (183)
.++++++|++|+++.
T Consensus 200 ~~~~~vei~ii~k~~ 214 (243)
T d1irud_ 200 SGGKNIELAVMRRDQ 214 (243)
T ss_dssp TTSTTCCEEEEESSS
T ss_pred CCCCcEEEEEEECCC
Confidence 457899999999874
No 32
>d1irub_ d.153.1.4 (B:) Proteasome alpha subunit (non-catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00 E-value=7.9e-35 Score=231.13 Aligned_cols=158 Identities=15% Similarity=0.166 Sum_probs=147.5
Q ss_pred cccceeEEecCceEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhc----CCCceeeEEEEEE
Q 030109 4 FFYILTSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKR----FFPYYSFNVLGGL 79 (183)
Q Consensus 4 ~~~~ki~~I~~~i~~~~sG~~aD~~~l~~~~r~~~~~~~~~~~~~i~~~~la~~is~~ly~~r----~~P~~v~~lvaG~ 79 (183)
...+|||+|+++++|+++|..+|++.++++++.+++.|+++++++++++.+++.++++++.++ .|||+++++++|+
T Consensus 59 ~~~~ki~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~~~~~li~g~ 138 (233)
T d1irub_ 59 RSVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGW 138 (233)
T ss_dssp TTCCSSEESSSSEEEEEEECHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHTTTSBTBCCCSEEEEEEEE
T ss_pred cccceEEEecCceEEEEeccchHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhccccccceEEEeeeec
Confidence 456799999999999999999999999999999999999999999999999999999996532 6899999999999
Q ss_pred eCCCceEEEEEcCCCceeeeCeEEEcCChhhhHHHHHcccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcccc
Q 030109 80 DNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYT 159 (183)
Q Consensus 80 D~~g~p~Ly~iD~~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~~~~~rd~~~ 159 (183)
|++ +|+||++||+|++.+++++|+|+|+++++++||+.|++ +|+++||++++++||+.+.+||. +
T Consensus 139 d~~-~~~ly~id~~G~~~~~~~~a~G~gs~~~~~~Le~~~~~-------------~ms~eea~~l~~~~L~~~~~~d~-~ 203 (233)
T d1irub_ 139 NEG-RPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNE-------------DLELEDAIHTAILTLKESFEGQM-T 203 (233)
T ss_dssp CSS-SEEEEEECTTSCEEEBSEEEESTTHHHHHHHHHHHCCT-------------TCCHHHHHHHHHHHHHTTCCSCC-C
T ss_pred ccC-CceEEEEcCCcceEeccceecCCcHHHHHHHHHhhccc-------------CccHHHHHHHHHHHHHHHHhccC-C
Confidence 864 59999999999999999999999999999999999998 99999999999999999999997 5
Q ss_pred CCcEEEEEEcCCCeEEE
Q 030109 160 GDKLEIVVLNKGGIHRE 176 (183)
Q Consensus 160 g~~i~I~ii~k~g~~~~ 176 (183)
+++++|++|+++|++..
T Consensus 204 ~~~vev~ii~~~g~~~l 220 (233)
T d1irub_ 204 EDNIEVGICNEAGFRRL 220 (233)
T ss_dssp SSSEEEEEEETTEEEEC
T ss_pred CCcEEEEEEeCCCeEEC
Confidence 67899999999998653
No 33
>d1q5qa_ d.153.1.4 (A:) Proteasome alpha subunit (non-catalytic) {Rhodococcus erythropolis [TaxId: 1833]}
Probab=100.00 E-value=2.7e-34 Score=227.91 Aligned_cols=156 Identities=14% Similarity=0.122 Sum_probs=137.8
Q ss_pred ccceeEEecCceEEEecCCHHHHHHHHHHHHHHHHHHHHhcC-CCCCHHHHHHHHHHHH---hhhcCCCceeeEEEEEEe
Q 030109 5 FYILTSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHN-KQMSCPGMAQLLSNTL---YYKRFFPYYSFNVLGGLD 80 (183)
Q Consensus 5 ~~~ki~~I~~~i~~~~sG~~aD~~~l~~~~r~~~~~~~~~~~-~~i~~~~la~~is~~l---y~~r~~P~~v~~lvaG~D 80 (183)
..+||++|++||+|+++|..+|++.++++++.+++.|+++++ .+++++.+++.+++++ |.+++|||+|++||||||
T Consensus 41 s~~KI~~i~~~i~~~~sG~~aD~~~l~~~~r~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~~~rP~gvs~lvaG~D 120 (227)
T d1q5qa_ 41 ALHKVSELYDRLGFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEVEICVAEVG 120 (227)
T ss_dssp SSCSEEEEETTEEEEEEECHHHHHHHHHHHHHHHHHHHHHSCGGGCCHHHHHHHHHHHHHHHHHHSSSCCCEEEEEEECC
T ss_pred CcceEEEecCceEEEecCchHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEEEEEe
Confidence 468999999999999999999999999999999999999998 4689999999999875 445678999999999999
Q ss_pred CC---CceEEEEEcCCCceeeeC-eEEEcCChhhhHHHHHcccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhc
Q 030109 81 NE---GKGCVYTYDAVGSYERVG-YSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERD 156 (183)
Q Consensus 81 ~~---g~p~Ly~iD~~G~~~~~~-~~a~G~gs~~~~~~Le~~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~~~~~rd 156 (183)
.. ++|+||++||+|++.+++ +++.|.+++.++++|+++|++ +||++||++++++||+.+.++|
T Consensus 121 ~~g~~~~p~Ly~vDpsG~~~~~~~~~~~g~~s~~~~~~Le~~y~~-------------~ms~eea~~la~~aL~~a~~~d 187 (227)
T d1q5qa_ 121 RVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRA-------------DLDLEAAVGIAVNALRQGGAGE 187 (227)
T ss_dssp CSSCCCCCEEEEEETTSCEEEESSEEEESSSHHHHHHHHHHHCCT-------------TCCHHHHHHHHHHHHTTCC---
T ss_pred cCCCCCCCEEEEEccccceeeecccccCCCchHHHHHHHHHhccC-------------CCCHHHHHHHHHHHHHHHhhcc
Confidence 63 469999999999999876 567788899999999999998 9999999999999999999887
Q ss_pred c----ccCCcEEEEEEcCCCe
Q 030109 157 I----YTGDKLEIVVLNKGGI 173 (183)
Q Consensus 157 ~----~~g~~i~I~ii~k~g~ 173 (183)
. .+++++||+|++++|.
T Consensus 188 ~~~~~~~~~~ievavi~k~~~ 208 (227)
T d1q5qa_ 188 GEKRNVDVASLEVAVLDQSRP 208 (227)
T ss_dssp -----CCSSCSEEEEEETTSS
T ss_pred cccCCcCcceEEEEEEECCCC
Confidence 4 3567899999999985
No 34
>d1q5qh_ d.153.1.4 (H:) Proteasome beta subunit (catalytic) {Rhodococcus erythropolis [TaxId: 1833]}
Probab=100.00 E-value=8.2e-33 Score=217.85 Aligned_cols=159 Identities=19% Similarity=0.207 Sum_probs=146.6
Q ss_pred ccceeEEecCceEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhc---CCCceeeEEEEEEe-
Q 030109 5 FYILTSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKR---FFPYYSFNVLGGLD- 80 (183)
Q Consensus 5 ~~~ki~~I~~~i~~~~sG~~aD~~~l~~~~r~~~~~~~~~~~~~i~~~~la~~is~~ly~~r---~~P~~v~~lvaG~D- 80 (183)
..+||++|++|++++++|..+|++.+.++++.+++.|++.++.+++++.+++++++++|.++ ++|+++.++++|+|
T Consensus 30 ~~~KI~~i~~~i~~~~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 109 (224)
T d1q5qh_ 30 DVEKVYVTDEYSAAGIAGTAGIAIELVRLFAVELEHYEKIEGVPLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDL 109 (224)
T ss_dssp CCCCEEEEETTEEEEEEECHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHTTHHHHTTTCCEEEEEEEECT
T ss_pred CcceEEEeCCcEEEEecccchHHHHHHHHHHHHhHHHHHhhCCCccHHHHHHHHHHHHHHhhcccccCccceeeEEEeec
Confidence 45799999999999999999999999999999999999999999999999999999997643 68999999998876
Q ss_pred ----CCCceEEEEEcCCCceeee--CeEEEcCChhhhHHHHHcccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHh
Q 030109 81 ----NEGKGCVYTYDAVGSYERV--GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATE 154 (183)
Q Consensus 81 ----~~g~p~Ly~iD~~G~~~~~--~~~a~G~gs~~~~~~Le~~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~~~~~ 154 (183)
++++|+||.+||+|+...+ +++|+|+|+.+++++||++|++ +||.+||++++++||..+.+
T Consensus 110 ~g~d~~~~~~l~~~d~~G~~~~~~~~~~a~GsG~~~a~~~Le~~~~~-------------~mt~~ea~~l~~~al~~a~~ 176 (224)
T d1q5qh_ 110 DADDESRAGRIVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKIYSP-------------DSDEETALRAAIESLYDAAD 176 (224)
T ss_dssp TCSSTTSCEEEEEECTTSCEEECCSSEEEESTTHHHHHHHHHHHCCT-------------TCCHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCceEEEEEccCcEEEeccceeeecCccHHHHHHHHHhhcc-------------cCCHHHHHHHHHHHHHHHHh
Confidence 3567999999999998775 6899999999999999999998 99999999999999999999
Q ss_pred hccccCCc-------EEEEEEcCCCeEEE
Q 030109 155 RDIYTGDK-------LEIVVLNKGGIHRE 176 (183)
Q Consensus 155 rd~~~g~~-------i~I~ii~k~g~~~~ 176 (183)
||..||+. +++++++++|++..
T Consensus 177 rD~~SGg~~~~~~~~~~~~~i~~~g~~~l 205 (224)
T d1q5qh_ 177 DDSATGGPDLTRGIYPTAVTITQAGAVHV 205 (224)
T ss_dssp HCTTTCCCBTTTTBCCEEEEEETTEEEEC
T ss_pred hccccCCcccccccceEEEEEeCCcEEEc
Confidence 99999863 88999999998753
No 35
>d2z3ba1 d.153.1.4 (A:1-180) HslV (ClpQ) protease {Bacillus subtilis [TaxId: 1423]}
Probab=99.74 E-value=4.4e-19 Score=134.25 Aligned_cols=144 Identities=15% Similarity=0.011 Sum_probs=101.0
Q ss_pred ccceeEEecCc-eEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCCceeeEEEEEEeCCC
Q 030109 5 FYILTSCRADK-CVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEG 83 (183)
Q Consensus 5 ~~~ki~~I~~~-i~~~~sG~~aD~~~l~~~~r~~~~~~~~~~~~~i~~~~la~~is~~ly~~r~~P~~v~~lvaG~D~~g 83 (183)
..+|++.++++ ++++.+|..+|.+.+.+.++.+.+.++......+......... ..++.++..++......+|++
T Consensus 36 ~~~ki~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--- 111 (180)
T d2z3ba1 36 TARKVRKLFNGKVLAGFAGSVADAFTLFEKFEAKLEEYNGNLKRAAVELAKEWRS-DKVLRKLEAMLIVMNQDTLLL--- 111 (180)
T ss_dssp CCCCEEEETTTTEEEEECSCHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH-CTTGGGCCCCEEEECSSCEEE---
T ss_pred cceEEEEecccceecccchHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHhH-HHHHHHhhcceeeeecccccc---
Confidence 45788888774 8888899999999999998887766533222121111111111 111222233444444444444
Q ss_pred ceEEEEEcCCCceeeeCeEEEcCChhhhHHHHHcccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCcE
Q 030109 84 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKL 163 (183)
Q Consensus 84 ~p~Ly~iD~~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~~~~~rd~~~g~~i 163 (183)
+..++.+......+.|+|+|+.+|++.||+.|++ +|+.+||++|+++||+.|.++|+.+++++
T Consensus 112 ----~~~~~~~~~~~~~~~a~GSGs~~A~g~l~~~~~~-------------~~s~~eA~~l~~~Al~~A~e~dvyT~~~~ 174 (180)
T d2z3ba1 112 ----VSGTGEVIEPDDGILAIGSGGNYALAAGRALKKH-------------AGESMSASEIARAALETAGEICVYTNDQI 174 (180)
T ss_dssp ----ECTTCCEECCSSSEEEESTTHHHHHHHHHHHHHH-------------HGGGCCHHHHHHHHHHHHHHHCTTCCSCC
T ss_pred ----ccCCceeecccccEEEEcCchHHHHHHHHHHhhc-------------CCCccCHHHHHHHHHHHHHhhcEEcCCcE
Confidence 3444444444445889999999999999999997 99999999999999999999999999999
Q ss_pred EEEEEc
Q 030109 164 EIVVLN 169 (183)
Q Consensus 164 ~I~ii~ 169 (183)
+|.+|.
T Consensus 175 ~~~~i~ 180 (180)
T d2z3ba1 175 ILEELE 180 (180)
T ss_dssp EEEEEC
T ss_pred EEEEeC
Confidence 998873
No 36
>d1m4ya_ d.153.1.4 (A:) HslV (ClpQ) protease {Thermotoga maritima [TaxId: 2336]}
Probab=99.72 E-value=3e-17 Score=122.69 Aligned_cols=143 Identities=16% Similarity=-0.018 Sum_probs=105.9
Q ss_pred cccceeEEecCceEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCCceeeEEEEEEeCCC
Q 030109 4 FFYILTSCRADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNEG 83 (183)
Q Consensus 4 ~~~~ki~~I~~~i~~~~sG~~aD~~~l~~~~r~~~~~~~~~~~~~i~~~~la~~is~~ly~~r~~P~~v~~lvaG~D~~g 83 (183)
...+|+++|+++++++.+|..+|.+.+...+..+...+.... ........+..+...+ .++....++.+.+ ++
T Consensus 29 r~~~Ki~~i~~~~~~~~~g~~ad~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~ 101 (171)
T d1m4ya_ 29 GNARKVRKLGEGKVLAGFAGSVADAMTLFDRFEAKLREWGGN-----LTKAAVELAKDWRTDR-VLRRLEALLLVAD-KE 101 (171)
T ss_dssp SCCCCEEEETTTTEEEEEESCHHHHHHHHHHHHHHHHHTTTC-----HHHHHHHHHHHHHHCT-TGGGCCCEEEEEC-SS
T ss_pred CCcceEEEecCCcEEEEEeechhhHHHHHHHHHHHHHHhhcc-----chhhHHHHHHHHHHhh-hhcccccccceec-CC
Confidence 346799999999999999999999998887777665543322 2222222222222221 1222333344455 45
Q ss_pred ceEEEEEcCCCceeeeCeEEEcCChhhhHHHHHcccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCcE
Q 030109 84 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKL 163 (183)
Q Consensus 84 ~p~Ly~iD~~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~~~~~rd~~~g~~i 163 (183)
+|.++..|+.|.....++.|+|+|+.+|++.|+.++++ ++++ |.+++++||..|.++|+.+|+++
T Consensus 102 ~~~~~~~d~~g~~~~~~~~a~GSGs~~A~g~l~~~~~~------------~~~~---a~el~~~Ai~~A~e~dvyTg~~~ 166 (171)
T d1m4ya_ 102 NIFIISGNGEVIQPDDDAAAIGSGGPYALAAAKALLRN------------TDLS---AREIVEKAMTIAGEICIYTNQNI 166 (171)
T ss_dssp CEEEECTTSCEECCSSSEEEESTTHHHHHHHHHHHHHH------------CCCC---HHHHHHHHHHHHHHHCTTCCSCC
T ss_pred cceEEecCCceeeecCCEEEEcchHHHHHHHHHhhccC------------CCCC---HHHHHHHHHHHHHhhceEcCCcE
Confidence 69999999999999999999999999999999987764 2665 67789999999999999999999
Q ss_pred EEEEE
Q 030109 164 EIVVL 168 (183)
Q Consensus 164 ~I~ii 168 (183)
+|..|
T Consensus 167 ~i~~~ 171 (171)
T d1m4ya_ 167 VIEEV 171 (171)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 98754
No 37
>d1g3ka_ d.153.1.4 (A:) HslV (ClpQ) protease {Haemophilus influenzae [TaxId: 727]}
Probab=99.66 E-value=2e-16 Score=118.45 Aligned_cols=143 Identities=16% Similarity=0.043 Sum_probs=101.7
Q ss_pred cccceeEEecCce-EEEecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhcCCCceeeEEEEEEeCC
Q 030109 4 FFYILTSCRADKC-VMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDNE 82 (183)
Q Consensus 4 ~~~~ki~~I~~~i-~~~~sG~~aD~~~l~~~~r~~~~~~~~~~~~~i~~~~la~~is~~ly~~r~~P~~v~~lvaG~D~~ 82 (183)
...+||++|++++ +++.+|...+.+.+.+..+.+... ........+..++..++..+..+..... +.|.|.+
T Consensus 29 r~~~Ki~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 101 (173)
T d1g3ka_ 29 GNARKVRRLYNGKVLAGFAGGTADAFTLFELFERKLEM------HQGHLLKSAVELAKDWRTDRALRKLEAM-LIVADEK 101 (173)
T ss_dssp SCCCCEEEETTTTEEEEEESCHHHHHHHHHHHHHHHHH------TTTCHHHHHHHHHHHHHHSTTGGGCCCE-EEEECSS
T ss_pred CCcceEEEecCCcEEEEeeehhHhHHHHHHHHHHHHHh------hcCcchhHHHHHHHHHHHhhhhcccccc-cccccCC
Confidence 3457999998874 555666666655554443332222 1233344455555555444333333333 4456667
Q ss_pred CceEEEEEcCCCceeeeCeEEEcCChhhhHHHHHcccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCc
Q 030109 83 GKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDK 162 (183)
Q Consensus 83 g~p~Ly~iD~~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~~~~~rd~~~g~~ 162 (183)
+++.++..|+.|...+.++.|+|+|+.+|++.|+.+|+. +.+||.+++++||..|.++|+.++++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~a~GSGs~~A~~~l~~~~~~---------------~~~~A~ela~~Ai~~Aae~dvyTgd~ 166 (173)
T d1g3ka_ 102 ESLIITGIGDVVQPEEDQILAIGSGGNYALSAARALVEN---------------TELSAHEIVEKSLRIAGDICVFTNTN 166 (173)
T ss_dssp CEEEEETTTEEECCCTTCEEEESTTHHHHHHHHHHHHHH---------------CCCCHHHHHHHHHHHHHHHCTTCCSC
T ss_pred CcceecccCceEEecCCCEEEecchHHHHHHHHHHhhhc---------------CCCCHHHHHHHHHHHHHhhcEEcCCc
Confidence 889999999999999999999999999999999988753 33468889999999999999999999
Q ss_pred EEEEEE
Q 030109 163 LEIVVL 168 (183)
Q Consensus 163 i~I~ii 168 (183)
++|..|
T Consensus 167 ~~i~~~ 172 (173)
T d1g3ka_ 167 FTIEEL 172 (173)
T ss_dssp CEEEEE
T ss_pred EEEEEC
Confidence 998776
No 38
>d2a2la1 d.110.9.1 (A:4-145) DhaI homolog {Klebsiella pneumoniae [TaxId: 573]}
Probab=73.25 E-value=3.1 Score=28.03 Aligned_cols=39 Identities=21% Similarity=0.198 Sum_probs=33.3
Q ss_pred CCCCHHHHHHHHHHHHHHHHhhccccCCcEEEEEEcCCCeEEE
Q 030109 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGIHRE 176 (183)
Q Consensus 134 ~~ls~~eA~~l~~~al~~~~~rd~~~g~~i~I~ii~k~g~~~~ 176 (183)
+.+|+++|.+++..|+..+.++ +..+.|.|++..|-...
T Consensus 8 ~~ltl~~A~~i~~~a~~~a~~~----g~~v~iaVvD~~G~l~~ 46 (142)
T d2a2la1 8 QTITLAAAQQMAAAVEKKATEI----NVAVVFSVVDRGGNTLL 46 (142)
T ss_dssp EEECHHHHHHHHHHHHHHHHHT----TCCCEEEEEETTSCEEE
T ss_pred ccCCHHHHHHHHHHHHHHHHHc----CCceEEEEEcCCCCEEE
Confidence 3799999999999999999876 45799999999997543
No 39
>d1cuka1 a.5.1.1 (A:156-203) DNA helicase RuvA subunit, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=70.56 E-value=2 Score=23.70 Aligned_cols=34 Identities=6% Similarity=-0.022 Sum_probs=26.7
Q ss_pred EEcCChhhhHHHHHcccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 030109 103 SQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCF 149 (183)
Q Consensus 103 a~G~gs~~~~~~Le~~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al 149 (183)
+-|+....+...+.+..++ ++|.++.++.+.+++
T Consensus 14 ~LGY~~~ea~~av~~i~~~-------------~~s~E~lIk~ALk~m 47 (48)
T d1cuka1 14 ALGYKPQEASRMVSKIARP-------------DASSETLIREALRAA 47 (48)
T ss_dssp HHTCCHHHHHHHHHHSCCS-------------SCCHHHHHHHHHHTT
T ss_pred HcCCCHHHHHHHHHHhcCC-------------CCCHHHHHHHHHHHh
Confidence 4588888888899887665 899998888777653
No 40
>d1l0oc_ a.4.13.2 (C:) SigmaF {Bacillus stearothermophilus [TaxId: 1422]}
Probab=68.23 E-value=4.6 Score=22.75 Aligned_cols=34 Identities=9% Similarity=0.121 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHH
Q 030109 26 DVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLS 59 (183)
Q Consensus 26 D~~~l~~~~r~~~~~~~~~~~~~i~~~~la~~is 59 (183)
-.+....+++.....+....|+++|++.+|..+.
T Consensus 9 ~~~e~~~ki~~~~~~l~q~lgRePT~~EiA~~l~ 42 (57)
T d1l0oc_ 9 SLKEMGNKIRKAKDELSKTRGRAPTVTEIADHLG 42 (57)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCCBHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHC
Confidence 3456677788888888889999999999998764
No 41
>d1rp3a1 a.4.13.1 (A:87-163) Sigma factor sigma-28 (FliA) {Aquifex aeolicus [TaxId: 63363]}
Probab=59.05 E-value=8.4 Score=22.66 Aligned_cols=33 Identities=9% Similarity=0.080 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHH
Q 030109 27 VKALQKLLAARHLIYQHQHNKQMSCPGMAQLLS 59 (183)
Q Consensus 27 ~~~l~~~~r~~~~~~~~~~~~~i~~~~la~~is 59 (183)
++...+.++.....+....|++++.+.+|..+.
T Consensus 5 ~r~~~~ki~~a~~~L~~~lGR~Pt~~EiA~~lg 37 (77)
T d1rp3a1 5 VREKERRIKEVVEKLKEKLGREPTDEEVAKELG 37 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHCcCCCHHHHHHHHC
Confidence 345667777777888888999999999998775
No 42
>d2d9ia1 d.68.8.1 (A:8-90) Nedd4-binding protein 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=48.01 E-value=14 Score=22.01 Aligned_cols=39 Identities=23% Similarity=0.210 Sum_probs=27.8
Q ss_pred CCCHHHHHHHHHHHHHHHHhhccccCCcEEEEEEcCCCe
Q 030109 135 PLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGGI 173 (183)
Q Consensus 135 ~ls~~eA~~l~~~al~~~~~rd~~~g~~i~I~ii~k~g~ 173 (183)
.++.+||++.+.+.|....+......+.-.|.||+=.|.
T Consensus 8 G~~~~eA~~~l~~~l~~~~~~~~~~~~~~~l~IItG~G~ 46 (83)
T d2d9ia1 8 GLHVDEALEHLMRVLEKKTEEFKQNGGKPYLSVITGRGN 46 (83)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEEECCCSG
T ss_pred CCCHHHHHHHHHHHHHHHHHhhhhcCCceEEEEEECCCC
Confidence 689999999999998877653222334556788876663
No 43
>d1ku2a1 a.4.13.1 (A:273-332) Sigma factor SigA {Thermus aquaticus [TaxId: 271]}
Probab=43.42 E-value=24 Score=19.76 Aligned_cols=30 Identities=13% Similarity=0.109 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCHHHHHHHH
Q 030109 29 ALQKLLAARHLIYQHQHNKQMSCPGMAQLL 58 (183)
Q Consensus 29 ~l~~~~r~~~~~~~~~~~~~i~~~~la~~i 58 (183)
..+++++...+......|++++++.+|..+
T Consensus 9 e~i~rv~r~~~~l~qe~gRePt~eEiA~~l 38 (60)
T d1ku2a1 9 ETINKLSRTARQLQQELGREPSYEEIAEAM 38 (60)
T ss_dssp HHHHHHHHHHHHHHHHHTSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 445566666666777889999999999875
No 44
>d1u94a2 d.48.1.1 (A:269-328) RecA protein, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=33.93 E-value=17 Score=20.62 Aligned_cols=29 Identities=14% Similarity=0.275 Sum_probs=26.3
Q ss_pred EcCCCceeeeCeEEEcCChhhhHHHHHcc
Q 030109 90 YDAVGSYERVGYSSQGSGSTLIMPFLDNQ 118 (183)
Q Consensus 90 iD~~G~~~~~~~~a~G~gs~~~~~~Le~~ 118 (183)
++-+|+.+++.---+|.|...+..+|+.+
T Consensus 16 i~KsGsWysy~~eklGQGre~~~~~L~en 44 (60)
T d1u94a2 16 IEKAGAWYSYKGEKIGQGKANATAWLKDN 44 (60)
T ss_dssp EECCTTCEEETTEEEESSHHHHHHHHHHC
T ss_pred cccccceEEeCCccccchHHHHHHHHHHC
Confidence 56789999999999999999999999874
No 45
>d1vi9a_ c.72.1.5 (A:) Pyridoxamine kinase {Escherichia coli [TaxId: 562]}
Probab=28.35 E-value=59 Score=23.55 Aligned_cols=40 Identities=18% Similarity=0.119 Sum_probs=33.7
Q ss_pred EEcCChhhhHHHHHcccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhc
Q 030109 103 SQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERD 156 (183)
Q Consensus 103 a~G~gs~~~~~~Le~~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~~~~~rd 156 (183)
.+|.|..++-.++-...+ ..+++||++.|...+..++.+-
T Consensus 219 ~~GtGD~fsa~l~a~l~~--------------G~~l~~A~~~A~~~v~~~l~~t 258 (288)
T d1vi9a_ 219 PVGVGDVTSGLLLVKLLQ--------------GATLQEALEHVTAAVYEIMVTT 258 (288)
T ss_dssp CSCHHHHHHHHHHHHHHT--------------TCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCChhHHHHHHHHHHHHc--------------CCCHHHHHHHHHHHHHHHHHhh
Confidence 469999998888887766 6899999999999888888763
No 46
>d2hs5a1 a.4.5.6 (A:25-93) Putative transcriptional regulator RHA1_ro03477 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Probab=27.33 E-value=22 Score=20.23 Aligned_cols=33 Identities=12% Similarity=0.161 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHH
Q 030109 27 VKALQKLLAARHLIYQHQHNKQMSCPGMAQLLS 59 (183)
Q Consensus 27 ~~~l~~~~r~~~~~~~~~~~~~i~~~~la~~is 59 (183)
...+.+.++..+..-++..|..++.+.||+.+.
T Consensus 4 ~~qi~~~l~~~I~~g~~~~G~~l~~~~La~~~~ 36 (69)
T d2hs5a1 4 TTRVAGILRDAIIDGTFRPGARLSEPDICAALD 36 (69)
T ss_dssp HHHHHHHHHHHHHHTSSCTTCEECHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCCCcCccCHHHHHHHHC
Confidence 356788899999888888899998877877654
No 47
>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}
Probab=25.18 E-value=23 Score=21.21 Aligned_cols=17 Identities=12% Similarity=-0.064 Sum_probs=14.0
Q ss_pred CceEEEEEcCCCceeee
Q 030109 83 GKGCVYTYDAVGSYERV 99 (183)
Q Consensus 83 g~p~Ly~iD~~G~~~~~ 99 (183)
++..+|..||+|+..+.
T Consensus 101 ~g~~~~~~DPdGn~ief 117 (120)
T d1xrka_ 101 WGREFALRDPAGNCVHF 117 (120)
T ss_dssp TEEEEEEECTTCCEEEE
T ss_pred CEEEEEEECCCCCEEEE
Confidence 44689999999998764
No 48
>g2gac.1 d.153.1.5 (A:,B:) Glycosylasparaginase (aspartylglucosaminidase, AGA) {Flavobacterium meningosepticum [TaxId: 238]}
Probab=25.06 E-value=71 Score=23.45 Aligned_cols=69 Identities=14% Similarity=0.160 Sum_probs=41.2
Q ss_pred CCCceeeeC---eEEEcCChhhhHHHHHc----ccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccc--cCCc
Q 030109 92 AVGSYERVG---YSSQGSGSTLIMPFLDN----QLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIY--TGDK 162 (183)
Q Consensus 92 ~~G~~~~~~---~~a~G~gs~~~~~~Le~----~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~~~~~rd~~--~g~~ 162 (183)
..|.+.... .+++|.|..+++..+-. .++. .++.+||.+-+++-+......... ....
T Consensus 173 GaG~yAd~~~gavs~TG~GE~iir~~~a~~v~~~~~~-------------g~~~~~A~~~ai~~~~~~~~~~g~~~~~~~ 239 (275)
T g2gac.1 173 GAGLFVDNEIGAATATGHGEEVIRTVGTHLVVELMNQ-------------GRTPQQACKEAVERIVKIVNRRGKNLKDIQ 239 (275)
T ss_dssp TTTEEEETTTEEEEEEECHHHHHHHTHHHHHHHHHHT-------------TCCHHHHHHHHHHHHHHHHHHTTCCGGGCC
T ss_pred ccceEEeCCcceEecccccHhHHhhHHHHHHHHHHHc-------------CCCHHHHHHHHHHHHHHHhccCCccccccc
Confidence 356666533 55899999888754432 2232 689999988877666554433211 1123
Q ss_pred EEEEEEcCCCe
Q 030109 163 LEIVVLNKGGI 173 (183)
Q Consensus 163 i~I~ii~k~g~ 173 (183)
+-+..|+++|-
T Consensus 240 ~G~Iavd~~G~ 250 (275)
T g2gac.1 240 VGFIALNKKGE 250 (275)
T ss_dssp EEEEEEETTSC
T ss_pred eeEEEEcCCCC
Confidence 34556678874
No 49
>g1apy.1 d.153.1.5 (A:,B:) Glycosylasparaginase (aspartylglucosaminidase, AGA) {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.99 E-value=61 Score=24.18 Aligned_cols=63 Identities=14% Similarity=0.115 Sum_probs=38.9
Q ss_pred CCceeee---CeEEEcCChhhhHHHHHc----ccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCcEEE
Q 030109 93 VGSYERV---GYSSQGSGSTLIMPFLDN----QLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATERDIYTGDKLEI 165 (183)
Q Consensus 93 ~G~~~~~---~~~a~G~gs~~~~~~Le~----~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~~~~~rd~~~g~~i~I 165 (183)
.|.+... -.+++|.|..+++..|-+ .++. .++.++|.+.+++-|.... .+...-|
T Consensus 199 aG~yAd~~~~avs~TG~GE~iir~~~A~~v~~~~~~-------------g~~~~~A~~~ai~~~~~~~-----~~~~ggv 260 (302)
T g1apy.1 199 AGAYADDTAGAAAATGNGDILMRFLPSYQAVEYMRR-------------GEDPTIACQKVISRIQKHF-----PEFFGAV 260 (302)
T ss_dssp TTEEEETTTEEEEEEECHHHHGGGCHHHHHHHHHHT-------------TCCHHHHHHHHHHHHHHHC-----TTCCEEE
T ss_pred cceeccCCceEEEeccccHHHHHHHHHHHHHHHHHc-------------CCCHHHHHHHHHHHHHHhC-----CCceEEE
Confidence 3445542 266899998877654443 2333 7899999888776554322 2234456
Q ss_pred EEEcCCCe
Q 030109 166 VVLNKGGI 173 (183)
Q Consensus 166 ~ii~k~g~ 173 (183)
..|+++|-
T Consensus 261 Iavd~~G~ 268 (302)
T g1apy.1 261 ICANVTGS 268 (302)
T ss_dssp EEEETTSC
T ss_pred EEEcCCCC
Confidence 67888885
No 50
>d1mo6a2 d.48.1.1 (A:270-329) RecA protein, C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=23.42 E-value=14 Score=21.00 Aligned_cols=29 Identities=17% Similarity=0.173 Sum_probs=25.9
Q ss_pred EcCCCceeeeCeEEEcCChhhhHHHHHcc
Q 030109 90 YDAVGSYERVGYSSQGSGSTLIMPFLDNQ 118 (183)
Q Consensus 90 iD~~G~~~~~~~~a~G~gs~~~~~~Le~~ 118 (183)
++-+|+.+++.---+|.|...+..+|+.+
T Consensus 16 i~KsGaWysy~~ekiGQGre~a~~~L~en 44 (60)
T d1mo6a2 16 IRKSGAWFTYEGEQLGQGKENARNFLVEN 44 (60)
T ss_dssp SEESSSEEECSSSEEEESHHHHHHHHHHC
T ss_pred hhccCceeEECCchHHhHHHHHHHHHHHC
Confidence 46689999999999999999999999974
No 51
>d1jxha_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Salmonella typhimurium [TaxId: 90371]}
Probab=22.79 E-value=1.2e+02 Score=21.41 Aligned_cols=55 Identities=18% Similarity=0.221 Sum_probs=39.2
Q ss_pred EEEEcCCCceeeeC-----eEEEcCChhhhHHHHHcccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhh
Q 030109 87 VYTYDAVGSYERVG-----YSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASATER 155 (183)
Q Consensus 87 Ly~iD~~G~~~~~~-----~~a~G~gs~~~~~~Le~~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~~~~~r 155 (183)
.+.+++.+...... ....|+|..++-.+.-...+ ..+++||++.|.+-+..++.+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~hGTGc~lasaiaa~La~--------------G~~l~~Av~~A~~~v~~~i~~ 246 (266)
T d1jxha_ 187 DWLFTREGEQRFSAPRVNTKNTHGTGCTLSAALAALRPR--------------HRSWGETVNEAKAWLSAALAQ 246 (266)
T ss_dssp CEEECSSCEEEC---CCCCSCCBTHHHHHHHHHHHHGGG--------------SSSHHHHHHHHHHHHHHHHTT
T ss_pred EEEEcCCceEEEeeccccCCCCCCchHHHHHHHHHHHHc--------------CCCHHHHHHHHHHHHHHHHHh
Confidence 45567777664321 23569999888777766554 799999999999888877764
No 52
>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}
Probab=21.70 E-value=30 Score=20.88 Aligned_cols=18 Identities=11% Similarity=0.038 Sum_probs=14.6
Q ss_pred CCceEEEEEcCCCceeee
Q 030109 82 EGKGCVYTYDAVGSYERV 99 (183)
Q Consensus 82 ~g~p~Ly~iD~~G~~~~~ 99 (183)
.++-.+|..||.|+..+.
T Consensus 101 ~g~~~~~~~DPdGn~ief 118 (122)
T d1jifa_ 101 PAGREFAVRDPAGNCVHF 118 (122)
T ss_dssp TTEEEEEEECTTCCEEEE
T ss_pred CCeEEEEEECCCCCEEEE
Confidence 345789999999998874
No 53
>d1vjea_ d.185.1.2 (A:) Autoinducer-2 production protein LuxS {Deinococcus radiodurans [TaxId: 1299]}
Probab=20.99 E-value=86 Score=20.86 Aligned_cols=68 Identities=13% Similarity=0.119 Sum_probs=43.4
Q ss_pred EEEEcCCCceeeeCeEEEc-CChhhhHHHHHcccCC--CC----CCCCCCC-CCCCCCCHHHHHHHHHHHHHHHHh
Q 030109 87 VYTYDAVGSYERVGYSSQG-SGSTLIMPFLDNQLKS--PS----PLLLPAQ-DAVTPLSEAEAVDLVKTCFASATE 154 (183)
Q Consensus 87 Ly~iD~~G~~~~~~~~a~G-~gs~~~~~~Le~~~~~--~~----~~~~~~~-~~~~~ls~~eA~~l~~~al~~~~~ 154 (183)
+-.+-|-|......-...| ..++.+...+++.++. .. +.+.+.+ .++.+.|++.|.++|++-|...+.
T Consensus 67 iId~sPMGCrTGFYl~~~g~~~~~~i~~~~~~~l~~i~~~~~~VPga~~~qCGny~~hsL~~Ak~~A~~~L~~~l~ 142 (149)
T d1vjea_ 67 VVDVSPMGCRTGMYMAVIGEPDEQGVMKAFEAALKDTAGHDQPIPGVSELECGNYRDHDLAAARQHARDVLDQGLK 142 (149)
T ss_dssp EEEEEECTTSSEEEEEEESSCCHHHHHHHHHHHHHHHHTCCSCCTTCSTTTCTTTTCCCHHHHHHHHHHHHHHCCC
T ss_pred eEEECCCccccccEEEEeCCCCHHHHHHHHHHHHHHHHhccCCCCCCChhcCCChhhCCHHHHHHHHHHHHHhccc
Confidence 4455677877777667777 5556666666654332 11 1111111 456689999999999999877654
No 54
>d1vh4a_ b.80.6.1 (A:) Stabilizer of iron transporter SufD {Escherichia coli [TaxId: 562]}
Probab=20.57 E-value=50 Score=25.21 Aligned_cols=52 Identities=13% Similarity=0.073 Sum_probs=40.8
Q ss_pred ceEEEEEcCCCceeeeCeEEEcCChhhhHHHHHcccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 030109 84 KGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFASAT 153 (183)
Q Consensus 84 ~p~Ly~iD~~G~~~~~~~~a~G~gs~~~~~~Le~~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~~~~ 153 (183)
.|.|- ++..-.. -.+.+++|.=....+-+|+.+ .++.+||.++++++|..-.
T Consensus 338 ~P~Le-i~~ddv~-~~Hgatvg~id~~~lfYL~sR----------------Gi~~~eA~~ll~~gF~~~~ 389 (413)
T d1vh4a_ 338 KPQLE-IYADDVK-CSHGATVGRIDDEQIFYLRSR----------------GINQQDAQQMIIYAFAAEL 389 (413)
T ss_dssp EEEEE-ECCSSEE-EEEEEEEECCCHHHHHHHHHT----------------TCCHHHHHHHHHHHHHHHH
T ss_pred cceEE-EecCCee-EEeeeeccCCCHHHHHHHHHc----------------CCCHHHHHHHHHHHHHHHH
Confidence 47773 4444443 347999999999999999974 8999999999999987543
No 55
>d3bzka5 c.55.3.13 (A:325-473) Transcriptional accessory factor Tex {Pseudomonas aeruginosa [TaxId: 287]}
Probab=20.55 E-value=1.1e+02 Score=20.03 Aligned_cols=89 Identities=18% Similarity=0.106 Sum_probs=45.1
Q ss_pred EEEEeCC--CceEEEEEcCCCceeeeCeE-EEc--CChhhhHHHHHcccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 030109 76 LGGLDNE--GKGCVYTYDAVGSYERVGYS-SQG--SGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTCFA 150 (183)
Q Consensus 76 vaG~D~~--g~p~Ly~iD~~G~~~~~~~~-a~G--~gs~~~~~~Le~~~~~~~~~~~~~~~~~~~ls~~eA~~l~~~al~ 150 (183)
|.|+||. .|-.+-.+|+.|.+...... -+. .....+...|.+.++....+ ..+.. ......|..+.+.+.++
T Consensus 7 vlg~DPg~r~gck~AvlD~~G~vld~~viyp~~~~~~~~~a~~~l~~li~k~~p~-vIaIG--NgTasre~~~~v~~l~~ 83 (149)
T d3bzka5 7 TLGLDPGLRTGVKVAVVDATGKLLDTATVYPHAPKNQWDQTLAVLAALCAKHQVE-LIAIG--NGTASRETDKLAGELIK 83 (149)
T ss_dssp EEEEECCSTTCEEEEEECTTSCEEEEEEECCSTTTCCHHHHHHHHHHHHHHTTCC-EEEEE--SSTTHHHHHHHHHHHHH
T ss_pred EEEECCCcccccEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHHHcCCe-EEEEC--CCccHHHHHHHHHHHHH
Confidence 4579993 45779999999999875322 111 12233333333322211000 00000 02345566555555543
Q ss_pred HHHhhccccCCcEEEEEEcCCCe
Q 030109 151 SATERDIYTGDKLEIVVLNKGGI 173 (183)
Q Consensus 151 ~~~~rd~~~g~~i~I~ii~k~g~ 173 (183)
.. ....+.+.+++.+|-
T Consensus 84 ~~------~~~~i~~~iV~e~gA 100 (149)
T d3bzka5 84 KY------PGMKLTKIMVSEAGA 100 (149)
T ss_dssp HC------GGGCCEEEEECCTTH
T ss_pred hC------CCCCcEEEEEeccch
Confidence 21 224688888888774
No 56
>d1hh2p4 d.202.1.1 (P:1-126) Transcription factor NusA, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=20.31 E-value=78 Score=20.14 Aligned_cols=39 Identities=18% Similarity=0.378 Sum_probs=31.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHhhccccCCcEEEEEEcCCC
Q 030109 134 TPLSEAEAVDLVKTCFASATERDIYTGDKLEIVVLNKGG 172 (183)
Q Consensus 134 ~~ls~~eA~~l~~~al~~~~~rd~~~g~~i~I~ii~k~g 172 (183)
.+++.+..+..+..||..+..+......+++|.+=.+.|
T Consensus 16 KgI~~e~v~~aie~al~~A~kk~~g~~~~~~v~id~~tG 54 (126)
T d1hh2p4 16 KGISKEEVIPILEKALVSAYRKNFGNSKNVEVVIDRNTG 54 (126)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHTTTCSSSCEEEECCSTTC
T ss_pred hCCCHHHHHHHHHHHHHHHHHHhcCCccceEEEEecCCC
Confidence 389999999999999999999876555577766544555
Done!