Your job contains 1 sequence.
>030110
MATPLSNFFSFILPSNALPKNSTPLAQPNHLSLSSQQKPKNASFSKVAPAQPQESHDSSS
ASSSSTELASVICPSLAYANTLFFKSAYNVQVVVDENEPEERLLNRFRREVMRAGVIQEC
KRRRFFETKQDEKKRKTREAAKRNRRRRSQFRGPVQNRQEATPTKKDDDDEDNWELPEGD
IPY
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 030110
(183 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2095143 - symbol:GHS1 "GLUCOSE HYPERSENSITIVE ... 381 3.1e-35 1
TAIR|locus:2161912 - symbol:AT5G63300 species:3702 "Arabi... 168 1.2e-12 1
UNIPROTKB|P68679 - symbol:rpsU species:83333 "Escherichia... 87 0.00049 1
>TAIR|locus:2095143 [details] [associations]
symbol:GHS1 "GLUCOSE HYPERSENSITIVE 1" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0042254 "ribosome biogenesis" evidence=ISS]
[GO:0009534 "chloroplast thylakoid" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] InterPro:IPR001911 Pfam:PF01165
PRINTS:PR00976 ProDom:PD005521 GO:GO:0009570 EMBL:CP002686
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0009534
EMBL:AP001312 HAMAP:MF_00358 TIGRFAMs:TIGR00030 IPI:IPI00527934
RefSeq:NP_566809.1 UniGene:At.25259 ProteinModelPortal:Q9LI88
SMR:Q9LI88 STRING:Q9LI88 PRIDE:Q9LI88 EnsemblPlants:AT3G27160.1
GeneID:822335 KEGG:ath:AT3G27160 TAIR:At3g27160 InParanoid:Q9LI88
OMA:NDLAIES PhylomeDB:Q9LI88 ProtClustDB:CLSN2688823
Genevestigator:Q9LI88 Uniprot:Q9LI88
Length = 183
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 86/181 (47%), Positives = 106/181 (58%)
Query: 5 LSNFFSFILPSNALPKNSTPLAQPNHLSLSSQQKPKNASFSKVAPAQPQEXXXXXXXXXX 64
L++F SFI P + K + P PN L+L S + + E
Sbjct: 7 LTSFISFISPFKSQTKPTPP---PN-LTLPSPTISQRRRNDLAIESMAVEETSSTASSLS 62
Query: 65 XTELASVICPSLAYANTLFFKSAYNVQVVVDENEPEERLLNRFRREVMRAGVIQECKRRR 124
+ELASVICPSLAY+NTLFF S YNVQV V++NE EERL+NRFRREVMR GVIQECKRRR
Sbjct: 63 -SELASVICPSLAYSNTLFFSSGYNVQVFVEDNESEERLVNRFRREVMRTGVIQECKRRR 121
Query: 125 FFETKQDXXXXXXXXXXXXXXXXXSQFRGPVQNRQEA---TPTKKDDDDEDNWELPEGDI 181
+FE KQD Q R + R+EA T +KK D++EDNWE+P GD+
Sbjct: 122 YFENKQDEKKRRTRDAAKRNKKRRPQARFTQETREEAAAATKSKKKDEEEDNWEMPGGDV 181
Query: 182 P 182
P
Sbjct: 182 P 182
>TAIR|locus:2161912 [details] [associations]
symbol:AT5G63300 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR001911 Pfam:PF01165
EMBL:CP002688 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:AB008265 UniGene:At.24504 TIGRFAMs:TIGR00030 EMBL:BT030061
IPI:IPI00547980 RefSeq:NP_001119483.1 UniGene:At.71284
ProteinModelPortal:Q9FMJ3 SMR:Q9FMJ3 STRING:Q9FMJ3 PRIDE:Q9FMJ3
EnsemblPlants:AT5G63300.2 GeneID:836450 KEGG:ath:AT5G63300
TAIR:At5g63300 OMA:KILTAEH ProtClustDB:CLSN2918889
Genevestigator:Q9FMJ3 Uniprot:Q9FMJ3
Length = 217
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 35/59 (59%), Positives = 45/59 (76%)
Query: 71 VICPSLAYANTLFFKSAY-NVQVVVDENEPEERLLNRFRREVMRAGVIQECKRRRFFET 128
V PSLA AN +FFKS+Y NV+VV + E EE+L+N F+R RAGV+QE +RRRFFE+
Sbjct: 62 VAYPSLANANLVFFKSSYYNVEVVPKDGESEEQLVNDFKRSCFRAGVLQESRRRRFFES 120
>UNIPROTKB|P68679 [details] [associations]
symbol:rpsU species:83333 "Escherichia coli K-12"
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IDA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001911
InterPro:IPR018278 Pfam:PF01165 PRINTS:PR00976 ProDom:PD005521
PROSITE:PS01181 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006412 GO:GO:0003735 EMBL:U28379
PDB:3J00 PDBsum:3J00 PDB:3FIH PDB:3IZV PDB:3IZW PDBsum:3FIH
PDBsum:3IZV PDBsum:3IZW GO:GO:0022627 EMBL:J01687 EMBL:V00346
PDB:3SFS PDB:3UOQ PDBsum:3SFS PDBsum:3UOQ PDB:4GAS PDB:4GD1
PDBsum:4GAS PDBsum:4GD1 PDB:1VS5 PDB:1VS7 PDB:2AVY PDB:2AW7
PDB:2I2P PDB:2I2U PDB:2QAL PDB:2QAN PDB:2QB9 PDB:2QBB PDB:2QBD
PDB:2QBF PDB:2QBH PDB:2QBJ PDB:2QOU PDB:2QOW PDB:2QOY PDB:2QP0
PDB:2VHO PDB:2VHP PDB:2WWL PDB:2YKR PDB:2Z4K PDB:2Z4M PDB:3DF1
PDB:3DF3 PDB:3E1A PDB:3E1C PDB:3I1M PDB:3I1O PDB:3I1Q PDB:3I1S
PDB:3I1Z PDB:3I21 PDB:3J0U PDB:3J0V PDB:3J0X PDB:3J0Z PDB:3J10
PDB:3J13 PDB:3J18 PDB:3KC4 PDB:3OAQ PDB:3OAR PDB:3OFA PDB:3OFB
PDB:3OFO PDB:3OFP PDB:3OFX PDB:3OFY PDB:3OR9 PDB:3ORA PDB:4A2I
PDB:4ADV PDB:4GAQ PDB:4GD2 PDBsum:1VS5 PDBsum:1VS7 PDBsum:2AVY
PDBsum:2AW7 PDBsum:2I2P PDBsum:2I2U PDBsum:2QAL PDBsum:2QAN
PDBsum:2QB9 PDBsum:2QBB PDBsum:2QBD PDBsum:2QBF PDBsum:2QBH
PDBsum:2QBJ PDBsum:2QOU PDBsum:2QOW PDBsum:2QOY PDBsum:2QP0
PDBsum:2VHO PDBsum:2VHP PDBsum:2WWL PDBsum:2YKR PDBsum:2Z4K
PDBsum:2Z4M PDBsum:3DF1 PDBsum:3DF3 PDBsum:3E1A PDBsum:3E1C
PDBsum:3I1M PDBsum:3I1O PDBsum:3I1Q PDBsum:3I1S PDBsum:3I1Z
PDBsum:3I21 PDBsum:3J0U PDBsum:3J0V PDBsum:3J0X PDBsum:3J0Z
PDBsum:3J10 PDBsum:3J13 PDBsum:3J18 PDBsum:3KC4 PDBsum:3OAQ
PDBsum:3OAR PDBsum:3OFA PDBsum:3OFB PDBsum:3OFO PDBsum:3OFP
PDBsum:3OFX PDBsum:3OFY PDBsum:3OR9 PDBsum:3ORA PDBsum:4A2I
PDBsum:4ADV PDBsum:4GAQ PDBsum:4GD2 eggNOG:COG0828 KO:K02970
ProtClustDB:PRK00270 HAMAP:MF_00358 TIGRFAMs:TIGR00030
HOGENOM:HOG000157460 PIR:A02749 RefSeq:NP_417537.1
RefSeq:YP_491257.1 ProteinModelPortal:P68679 SMR:P68679
DIP:DIP-47839N IntAct:P68679 MINT:MINT-1281887 PaxDb:P68679
PRIDE:P68679 EnsemblBacteria:EBESCT00000003297
EnsemblBacteria:EBESCT00000003298 EnsemblBacteria:EBESCT00000003299
EnsemblBacteria:EBESCT00000003300 EnsemblBacteria:EBESCT00000017874
GeneID:12933220 GeneID:947577 KEGG:ecj:Y75_p2991 KEGG:eco:b3065
PATRIC:32121544 EchoBASE:EB0913 EcoGene:EG10920 OMA:PFERKPP
BioCyc:EcoCyc:EG10920-MONOMER BioCyc:ECOL316407:JW3037-MONOMER
EvolutionaryTrace:P68679 Genevestigator:P68679 Uniprot:P68679
Length = 71
Score = 87 (35.7 bits), Expect = 0.00049, P = 0.00049
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 92 VVVDENEPEERLLNRFRREVMRAGVIQECKRRRFFE 127
+ V ENEP + L RF+R +AGV+ E +RR F+E
Sbjct: 4 IKVRENEPFDVALRRFKRSCEKAGVLAEVRRREFYE 39
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.129 0.375 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 183 155 0.00096 105 3 11 23 0.39 32
30 0.41 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 3
No. of states in DFA: 585 (62 KB)
Total size of DFA: 142 KB (2087 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.82u 0.11s 14.93t Elapsed: 00:00:00
Total cpu time: 14.82u 0.11s 14.93t Elapsed: 00:00:00
Start: Fri May 10 08:36:06 2013 End: Fri May 10 08:36:06 2013