Query 030114
Match_columns 183
No_of_seqs 236 out of 1522
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 13:57:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030114.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030114hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zzx_A Thioredoxin; oxidoreduc 99.9 1.4E-24 4.9E-29 149.1 13.3 97 77-182 2-104 (105)
2 2av4_A Thioredoxin-like protei 99.9 2.4E-24 8.3E-29 156.6 10.1 99 77-182 23-137 (160)
3 2qsi_A Putative hydrogenase ex 99.9 4.5E-23 1.5E-27 147.3 9.7 97 77-182 17-121 (137)
4 2qgv_A Hydrogenase-1 operon pr 99.9 7.9E-23 2.7E-27 146.5 7.2 96 77-182 19-123 (140)
5 4euy_A Uncharacterized protein 99.9 1.8E-22 6E-27 137.6 6.9 97 77-183 2-104 (105)
6 3qfa_C Thioredoxin; protein-pr 99.9 3.3E-21 1.1E-25 133.9 11.6 98 77-183 13-116 (116)
7 1gh2_A Thioredoxin-like protei 99.9 1.2E-20 4E-25 128.7 13.1 98 76-182 2-105 (107)
8 1xfl_A Thioredoxin H1; AT3G510 99.9 2.2E-20 7.7E-25 131.3 14.7 103 74-183 15-123 (124)
9 1ep7_A Thioredoxin CH1, H-type 99.9 1.3E-20 4.6E-25 129.1 12.8 101 76-182 3-109 (112)
10 3m9j_A Thioredoxin; oxidoreduc 99.8 2.1E-20 7.3E-25 126.5 13.3 98 77-183 2-105 (105)
11 3f3q_A Thioredoxin-1; His TAG, 99.8 3.2E-20 1.1E-24 127.4 13.5 95 78-183 9-109 (109)
12 3gnj_A Thioredoxin domain prot 99.8 2.9E-20 1E-24 127.1 12.9 98 76-182 5-108 (111)
13 3gix_A Thioredoxin-like protei 99.8 9.7E-21 3.3E-25 137.5 10.8 98 77-181 5-118 (149)
14 1r26_A Thioredoxin; redox-acti 99.8 4.5E-20 1.6E-24 130.0 13.4 95 77-182 21-121 (125)
15 3tco_A Thioredoxin (TRXA-1); d 99.8 4.1E-20 1.4E-24 125.6 12.7 94 81-183 9-108 (109)
16 2oe3_A Thioredoxin-3; electron 99.8 3.1E-20 1.1E-24 128.7 12.1 97 75-182 12-114 (114)
17 2vlu_A Thioredoxin, thioredoxi 99.8 5.3E-20 1.8E-24 128.1 13.2 100 76-182 13-118 (122)
18 3die_A Thioredoxin, TRX; elect 99.8 5.4E-20 1.8E-24 124.6 12.7 97 76-183 4-106 (106)
19 1xwb_A Thioredoxin; dimerizati 99.8 9.3E-20 3.2E-24 123.4 13.7 99 77-183 2-106 (106)
20 3d22_A TRXH4, thioredoxin H-ty 99.8 9.1E-20 3.1E-24 130.0 13.6 101 75-182 24-130 (139)
21 2vim_A Thioredoxin, TRX; thior 99.8 1.4E-19 5E-24 122.0 13.2 98 77-183 1-104 (104)
22 3d6i_A Monothiol glutaredoxin- 99.8 7E-20 2.4E-24 125.7 11.7 99 77-182 2-107 (112)
23 1nsw_A Thioredoxin, TRX; therm 99.8 9.4E-20 3.2E-24 123.4 12.0 96 78-183 3-104 (105)
24 2xc2_A Thioredoxinn; oxidoredu 99.8 1.5E-19 5.2E-24 125.1 13.3 97 77-183 15-117 (117)
25 2voc_A Thioredoxin; electron t 99.8 1.2E-19 4E-24 125.0 12.4 96 77-183 3-104 (112)
26 2ppt_A Thioredoxin-2; thiredox 99.8 8.8E-20 3E-24 133.2 11.9 96 77-182 49-150 (155)
27 2wz9_A Glutaredoxin-3; protein 99.8 1.5E-19 5.1E-24 131.4 12.6 101 74-183 11-117 (153)
28 1t00_A Thioredoxin, TRX; redox 99.8 1.2E-19 4.2E-24 124.3 11.5 97 77-182 7-109 (112)
29 2vm1_A Thioredoxin, thioredoxi 99.8 2.6E-19 8.8E-24 123.6 13.0 100 76-182 7-112 (118)
30 2trx_A Thioredoxin; electron t 99.8 1.8E-19 6E-24 122.7 12.0 97 77-182 4-106 (108)
31 1w4v_A Thioredoxin, mitochondr 99.8 1.5E-19 5E-24 125.9 11.6 98 77-182 14-117 (119)
32 2j23_A Thioredoxin; immune pro 99.8 1.1E-19 3.6E-24 127.0 10.8 102 72-183 12-120 (121)
33 3p2a_A Thioredoxin 2, putative 99.8 2E-19 6.9E-24 129.6 12.6 96 77-182 40-141 (148)
34 1ti3_A Thioredoxin H, PTTRXH1; 99.8 2E-19 6.8E-24 123.2 11.9 100 76-182 5-110 (113)
35 2i1u_A Thioredoxin, TRX, MPT46 99.8 1.4E-19 5E-24 125.5 11.4 101 74-183 11-117 (121)
36 1qgv_A Spliceosomal protein U5 99.8 7E-20 2.4E-24 131.9 9.7 98 77-181 5-118 (142)
37 1dby_A Chloroplast thioredoxin 99.8 1.8E-19 6E-24 122.5 11.3 98 77-183 3-106 (107)
38 1syr_A Thioredoxin; SGPP, stru 99.8 3E-19 1E-23 122.8 12.5 94 79-183 12-111 (112)
39 2i4a_A Thioredoxin; acidophIle 99.8 5.3E-19 1.8E-23 119.8 13.0 98 77-183 4-107 (107)
40 3hz4_A Thioredoxin; NYSGXRC, P 99.8 2.5E-19 8.4E-24 128.3 11.3 97 76-181 7-109 (140)
41 2yzu_A Thioredoxin; redox prot 99.8 5.5E-19 1.9E-23 119.9 12.6 97 77-183 3-105 (109)
42 3evi_A Phosducin-like protein 99.8 1.4E-19 4.8E-24 126.6 9.8 99 77-182 5-112 (118)
43 1fb6_A Thioredoxin M; electron 99.8 6.1E-19 2.1E-23 119.2 12.5 94 82-183 6-105 (105)
44 2o8v_B Thioredoxin 1; disulfid 99.8 2E-19 7E-24 127.1 10.2 97 77-182 24-126 (128)
45 3qou_A Protein YBBN; thioredox 99.8 4.6E-19 1.6E-23 140.7 13.2 99 76-182 8-112 (287)
46 3uvt_A Thioredoxin domain-cont 99.8 6.2E-19 2.1E-23 120.3 11.8 96 76-182 6-110 (111)
47 2l6c_A Thioredoxin; oxidoreduc 99.8 1.8E-19 6E-24 123.9 9.1 94 78-182 5-104 (110)
48 2dj1_A Protein disulfide-isome 99.8 4.1E-19 1.4E-23 126.4 11.2 96 76-182 18-122 (140)
49 2e0q_A Thioredoxin; electron t 99.8 8.5E-19 2.9E-23 117.8 11.5 91 82-182 5-101 (104)
50 2pu9_C TRX-F, thioredoxin F-ty 99.8 1.3E-18 4.4E-23 119.2 12.5 97 76-182 6-109 (111)
51 1thx_A Thioredoxin, thioredoxi 99.8 9.7E-19 3.3E-23 120.0 11.8 97 77-182 9-111 (115)
52 3ul3_B Thioredoxin, thioredoxi 99.8 4.1E-19 1.4E-23 125.1 10.1 83 95-182 40-128 (128)
53 3dxb_A Thioredoxin N-terminall 99.8 6.8E-19 2.3E-23 135.4 12.0 97 77-182 14-116 (222)
54 2f51_A Thioredoxin; electron t 99.8 1.2E-18 4.1E-23 121.3 12.1 96 77-182 5-111 (118)
55 1x5d_A Protein disulfide-isome 99.8 1E-18 3.4E-23 123.2 11.5 98 76-182 8-115 (133)
56 3h79_A Thioredoxin-like protei 99.8 8.8E-19 3E-23 123.2 11.1 98 76-182 16-126 (127)
57 3cxg_A Putative thioredoxin; m 99.8 7E-19 2.4E-23 125.1 10.2 99 75-183 20-128 (133)
58 3hxs_A Thioredoxin, TRXP; elec 99.8 1.3E-18 4.4E-23 124.1 11.6 101 76-183 23-138 (141)
59 3fk8_A Disulphide isomerase; A 99.8 6.6E-19 2.2E-23 124.6 8.7 98 80-182 12-131 (133)
60 1faa_A Thioredoxin F; electron 99.8 3.5E-18 1.2E-22 119.3 12.3 97 76-182 19-122 (124)
61 2l5l_A Thioredoxin; structural 99.8 3.3E-18 1.1E-22 121.7 12.3 100 76-182 10-124 (136)
62 1x5e_A Thioredoxin domain cont 99.8 3.2E-18 1.1E-22 119.9 11.6 94 76-182 8-108 (126)
63 2dbc_A PDCL2, unnamed protein 99.8 9.5E-19 3.2E-23 124.8 8.9 101 75-182 10-119 (135)
64 3emx_A Thioredoxin; structural 99.8 1.1E-18 3.7E-23 124.2 8.9 93 76-182 17-124 (135)
65 1v98_A Thioredoxin; oxidoreduc 99.8 4.6E-18 1.6E-22 121.4 11.4 96 77-182 35-136 (140)
66 3iv4_A Putative oxidoreductase 99.8 2.1E-18 7.3E-23 118.7 9.0 94 76-179 7-111 (112)
67 3aps_A DNAJ homolog subfamily 99.8 1.1E-18 3.6E-23 121.5 7.4 97 77-182 5-111 (122)
68 1oaz_A Thioredoxin 1; immune s 99.8 9E-19 3.1E-23 123.0 6.6 98 77-183 5-122 (123)
69 2dml_A Protein disulfide-isome 99.8 3.1E-18 1.1E-22 120.4 9.3 97 76-181 18-121 (130)
70 3apq_A DNAJ homolog subfamily 99.8 4.2E-18 1.4E-22 129.8 10.2 97 76-182 98-200 (210)
71 1zma_A Bacterocin transport ac 99.8 1.6E-18 5.4E-23 120.3 7.1 90 82-181 18-118 (118)
72 2dj0_A Thioredoxin-related tra 99.8 8.2E-19 2.8E-23 124.9 5.7 88 77-168 9-109 (137)
73 2l57_A Uncharacterized protein 99.7 8.5E-18 2.9E-22 117.7 10.3 84 95-183 24-116 (126)
74 2es7_A Q8ZP25_salty, putative 99.7 1.1E-18 3.7E-23 125.8 5.3 95 77-182 19-123 (142)
75 1mek_A Protein disulfide isome 99.7 2.2E-18 7.5E-23 118.8 6.3 97 77-183 9-116 (120)
76 1wmj_A Thioredoxin H-type; str 99.7 5.7E-19 1.9E-23 124.0 2.8 100 76-182 15-120 (130)
77 2fwh_A Thiol:disulfide interch 99.7 1E-17 3.4E-22 119.0 8.3 99 76-181 12-125 (134)
78 2r2j_A Thioredoxin domain-cont 99.7 1.9E-17 6.5E-22 136.9 11.3 96 77-182 7-115 (382)
79 2kuc_A Putative disulphide-iso 99.7 1.3E-17 4.3E-22 117.2 8.2 96 83-182 13-119 (130)
80 3ed3_A Protein disulfide-isome 99.7 7.4E-17 2.5E-21 129.5 13.1 99 75-182 17-140 (298)
81 3idv_A Protein disulfide-isome 99.7 4.2E-17 1.5E-21 125.7 11.2 96 76-182 16-120 (241)
82 2trc_P Phosducin, MEKA, PP33; 99.7 1.6E-17 5.3E-22 127.8 8.3 104 75-182 99-211 (217)
83 1a0r_P Phosducin, MEKA, PP33; 99.7 1.4E-17 4.8E-22 130.2 8.0 105 74-182 111-224 (245)
84 3f9u_A Putative exported cytoc 99.7 9.4E-18 3.2E-22 123.7 6.5 101 80-181 30-167 (172)
85 3idv_A Protein disulfide-isome 99.7 1.1E-16 3.8E-21 123.3 12.3 93 80-182 134-235 (241)
86 2yj7_A LPBCA thioredoxin; oxid 99.5 9E-19 3.1E-23 118.1 0.0 97 78-183 4-106 (106)
87 1a8l_A Protein disulfide oxido 99.7 1.1E-16 3.8E-21 122.6 11.0 92 82-182 122-224 (226)
88 2b5e_A Protein disulfide-isome 99.7 1.8E-16 6.1E-21 135.2 13.2 97 76-182 15-120 (504)
89 3f8u_A Protein disulfide-isome 99.7 1.3E-16 4.4E-21 135.2 11.3 96 77-182 3-107 (481)
90 1fo5_A Thioredoxin; disulfide 99.7 6.1E-17 2.1E-21 105.3 6.9 79 98-183 3-85 (85)
91 1nho_A Probable thioredoxin; b 99.7 6.9E-17 2.4E-21 105.0 6.7 78 99-183 3-84 (85)
92 3ga4_A Dolichyl-diphosphooligo 99.7 2.1E-16 7.1E-21 117.7 9.9 99 76-182 19-151 (178)
93 2ju5_A Thioredoxin disulfide i 99.7 2.5E-16 8.7E-21 114.4 9.8 93 84-181 34-149 (154)
94 1sji_A Calsequestrin 2, calseq 99.7 5.1E-16 1.7E-20 126.8 12.5 94 77-182 13-120 (350)
95 1wou_A Thioredoxin -related pr 99.7 1.9E-16 6.4E-21 110.9 8.3 98 76-181 5-122 (123)
96 2dj3_A Protein disulfide-isome 99.7 1.8E-17 6E-22 116.9 3.0 98 76-182 8-116 (133)
97 2djj_A PDI, protein disulfide- 99.7 5.6E-17 1.9E-21 112.4 5.1 95 77-183 9-116 (121)
98 3us3_A Calsequestrin-1; calciu 99.6 1.2E-15 4.1E-20 125.6 11.9 95 77-182 15-122 (367)
99 2lst_A Thioredoxin; structural 99.4 1.8E-17 6.1E-22 116.6 0.0 83 95-182 17-114 (130)
100 3q6o_A Sulfhydryl oxidase 1; p 99.6 1.1E-15 3.6E-20 118.9 9.9 98 76-179 13-126 (244)
101 3dml_A Putative uncharacterize 99.6 2.6E-16 9E-21 109.3 4.8 85 96-180 17-110 (116)
102 2b5x_A YKUV protein, TRXY; thi 99.6 7.2E-15 2.5E-19 104.4 12.3 84 95-179 27-144 (148)
103 2djk_A PDI, protein disulfide- 99.6 6.1E-16 2.1E-20 109.8 6.4 92 79-182 10-113 (133)
104 3apo_A DNAJ homolog subfamily 99.6 1.6E-15 5.6E-20 135.3 9.3 97 76-182 117-219 (780)
105 3ph9_A Anterior gradient prote 99.6 1.7E-16 5.7E-21 115.5 2.3 85 80-165 27-120 (151)
106 1lu4_A Soluble secreted antige 99.6 7.9E-15 2.7E-19 102.9 10.6 81 96-183 23-135 (136)
107 1sen_A Thioredoxin-like protei 99.6 1.4E-16 4.7E-21 117.2 0.9 86 95-180 44-148 (164)
108 1z6n_A Hypothetical protein PA 99.6 2.6E-15 9E-20 110.9 7.6 80 83-167 42-131 (167)
109 2ywm_A Glutaredoxin-like prote 99.6 5E-15 1.7E-19 113.7 9.3 89 82-181 124-217 (229)
110 3t58_A Sulfhydryl oxidase 1; o 99.6 6.1E-15 2.1E-19 126.5 10.4 99 76-179 13-126 (519)
111 3raz_A Thioredoxin-related pro 99.6 1.3E-14 4.4E-19 104.3 10.5 82 96-181 23-137 (151)
112 3erw_A Sporulation thiol-disul 99.6 1.2E-14 4.3E-19 102.8 10.0 80 96-180 33-145 (145)
113 2f9s_A Thiol-disulfide oxidore 99.6 2.1E-14 7.3E-19 103.0 11.3 83 96-182 25-136 (151)
114 3eyt_A Uncharacterized protein 99.6 1.5E-14 5.1E-19 104.4 10.4 84 96-179 27-151 (158)
115 3or5_A Thiol:disulfide interch 99.6 1.8E-14 6.3E-19 104.5 10.7 83 96-179 33-150 (165)
116 1zzo_A RV1677; thioredoxin fol 99.6 3.1E-14 1.1E-18 99.6 11.2 82 96-183 24-134 (136)
117 3lor_A Thiol-disulfide isomera 99.6 2.1E-14 7.2E-19 103.8 9.5 84 96-179 29-154 (160)
118 3ia1_A THIO-disulfide isomeras 99.5 4.1E-14 1.4E-18 101.7 10.9 78 98-182 31-142 (154)
119 2hls_A Protein disulfide oxido 99.5 4.7E-14 1.6E-18 109.9 11.2 80 96-182 137-224 (243)
120 3f8u_A Protein disulfide-isome 99.5 1.4E-14 4.7E-19 122.7 8.6 92 82-182 358-459 (481)
121 4evm_A Thioredoxin family prot 99.5 6.3E-14 2.2E-18 97.8 10.5 82 96-182 21-137 (138)
122 3kp8_A Vkorc1/thioredoxin doma 99.5 5.4E-15 1.8E-19 101.2 4.6 72 95-180 10-91 (106)
123 3uem_A Protein disulfide-isome 99.5 1.9E-14 6.5E-19 117.6 8.6 95 77-182 251-355 (361)
124 1ilo_A Conserved hypothetical 99.5 2.9E-14 9.8E-19 91.0 7.6 70 100-179 2-76 (77)
125 2lja_A Putative thiol-disulfid 99.5 2.2E-14 7.4E-19 102.8 7.7 83 96-182 29-141 (152)
126 3eur_A Uncharacterized protein 99.5 4E-14 1.4E-18 100.7 8.9 79 96-181 30-142 (142)
127 2h30_A Thioredoxin, peptide me 99.5 1.1E-14 3.7E-19 105.7 5.9 83 95-182 36-154 (164)
128 3ira_A Conserved protein; meth 99.5 2.8E-14 9.5E-19 105.9 7.8 74 83-161 29-120 (173)
129 3lwa_A Secreted thiol-disulfid 99.5 5.4E-14 1.8E-18 104.3 9.1 84 96-180 58-181 (183)
130 3gl3_A Putative thiol:disulfid 99.5 1.3E-13 4.5E-18 98.7 10.8 85 96-182 27-140 (152)
131 2b1k_A Thiol:disulfide interch 99.5 4E-14 1.4E-18 103.4 8.1 81 96-180 50-160 (168)
132 2c0g_A ERP29 homolog, windbeut 99.5 9.3E-14 3.2E-18 108.6 10.6 91 77-182 18-130 (248)
133 2lrn_A Thiol:disulfide interch 99.5 6.6E-14 2.3E-18 100.7 9.1 81 96-179 28-140 (152)
134 3apo_A DNAJ homolog subfamily 99.5 3.1E-14 1.1E-18 127.1 8.4 97 77-182 659-765 (780)
135 1ttz_A Conserved hypothetical 99.5 3.4E-14 1.2E-18 93.8 6.3 69 101-182 3-75 (87)
136 3fkf_A Thiol-disulfide oxidore 99.5 8.6E-14 3E-18 98.9 8.7 80 96-182 32-144 (148)
137 4fo5_A Thioredoxin-like protei 99.5 1.1E-13 3.8E-18 98.5 9.1 79 96-181 31-142 (143)
138 1a8l_A Protein disulfide oxido 99.5 3E-14 1E-18 108.9 6.4 95 80-181 6-110 (226)
139 1kng_A Thiol:disulfide interch 99.5 1.3E-13 4.5E-18 99.0 9.4 85 96-182 41-154 (156)
140 3qcp_A QSOX from trypanosoma b 99.5 2.8E-14 9.6E-19 120.4 6.6 87 76-166 24-126 (470)
141 3kcm_A Thioredoxin family prot 99.5 2.7E-13 9.3E-18 97.3 10.9 84 96-181 27-140 (154)
142 2l5o_A Putative thioredoxin; s 99.5 1.8E-13 6.1E-18 98.1 10.0 84 96-180 27-141 (153)
143 3hcz_A Possible thiol-disulfid 99.5 8.3E-14 2.8E-18 99.0 8.0 84 96-179 30-145 (148)
144 2b5e_A Protein disulfide-isome 99.5 3.7E-14 1.3E-18 120.9 7.1 96 76-182 359-465 (504)
145 2fgx_A Putative thioredoxin; N 99.5 8.3E-14 2.8E-18 95.4 7.2 73 98-179 29-106 (107)
146 3ha9_A Uncharacterized thiored 99.5 2.4E-13 8.3E-18 98.9 9.9 80 96-182 36-162 (165)
147 3hdc_A Thioredoxin family prot 99.5 2.5E-13 8.5E-18 98.3 9.8 72 96-168 40-138 (158)
148 3kh7_A Thiol:disulfide interch 99.5 3E-13 1E-17 100.0 10.1 84 95-181 56-168 (176)
149 2lrt_A Uncharacterized protein 99.5 3.3E-13 1.1E-17 97.4 9.5 83 96-181 34-146 (152)
150 2qc7_A ERP31, ERP28, endoplasm 99.5 3.9E-13 1.3E-17 104.7 10.2 92 77-182 7-117 (240)
151 3ewl_A Uncharacterized conserv 99.4 2.6E-13 8.9E-18 96.1 8.1 80 96-182 26-139 (142)
152 3fw2_A Thiol-disulfide oxidore 99.4 6.6E-13 2.3E-17 95.2 10.2 82 96-180 32-148 (150)
153 3kij_A Probable glutathione pe 99.4 7.3E-13 2.5E-17 98.1 10.5 87 96-182 37-172 (180)
154 2ywm_A Glutaredoxin-like prote 99.4 2.5E-13 8.7E-18 104.1 8.1 93 82-181 7-112 (229)
155 2hyx_A Protein DIPZ; thioredox 99.4 7.6E-13 2.6E-17 108.4 10.7 85 96-180 81-199 (352)
156 1jfu_A Thiol:disulfide interch 99.4 1.5E-12 5E-17 96.6 11.2 82 96-181 59-177 (186)
157 2rli_A SCO2 protein homolog, m 99.4 2E-12 7E-17 94.3 11.0 86 96-181 25-165 (171)
158 2ggt_A SCO1 protein homolog, m 99.4 1.3E-12 4.6E-17 94.5 9.9 87 96-182 22-163 (164)
159 2dlx_A UBX domain-containing p 99.4 1E-12 3.6E-17 95.5 9.2 99 83-182 28-138 (153)
160 2ywi_A Hypothetical conserved 99.4 9.4E-13 3.2E-17 98.3 9.0 83 96-179 44-173 (196)
161 2cvb_A Probable thiol-disulfid 99.4 1E-12 3.5E-17 97.7 8.9 65 96-161 32-132 (188)
162 3s9f_A Tryparedoxin; thioredox 99.4 8E-13 2.7E-17 96.8 8.1 69 96-164 47-148 (165)
163 1i5g_A Tryparedoxin II; electr 99.4 1.2E-12 4.1E-17 93.1 8.2 68 96-163 27-127 (144)
164 3dwv_A Glutathione peroxidase- 99.4 2.2E-12 7.6E-17 96.2 9.6 43 96-138 45-88 (187)
165 1o8x_A Tryparedoxin, TRYX, TXN 99.4 1.6E-12 5.3E-17 92.8 8.3 69 96-164 27-128 (146)
166 2f8a_A Glutathione peroxidase 99.4 2.6E-12 9E-17 97.8 9.8 43 96-138 46-89 (208)
167 3drn_A Peroxiredoxin, bacterio 99.4 6.3E-12 2.2E-16 91.3 11.2 85 96-181 27-146 (161)
168 1wjk_A C330018D20RIK protein; 99.3 1.6E-12 5.4E-17 87.9 6.4 75 96-182 14-94 (100)
169 2e7p_A Glutaredoxin; thioredox 99.3 4.3E-13 1.5E-17 92.2 3.5 77 96-181 18-105 (116)
170 2vup_A Glutathione peroxidase- 99.3 7.4E-12 2.5E-16 93.5 10.5 85 96-180 47-185 (190)
171 2v1m_A Glutathione peroxidase; 99.3 9.7E-12 3.3E-16 90.4 10.8 85 96-180 30-167 (169)
172 2p31_A CL683, glutathione pero 99.3 6E-12 2.1E-16 93.3 9.7 84 96-183 48-180 (181)
173 1o73_A Tryparedoxin; electron 99.3 3.3E-12 1.1E-16 90.6 7.8 68 96-163 27-127 (144)
174 2p5q_A Glutathione peroxidase 99.3 5.1E-12 1.7E-16 91.9 9.1 84 96-179 31-167 (170)
175 2k6v_A Putative cytochrome C o 99.3 5E-12 1.7E-16 92.2 9.0 83 96-183 34-172 (172)
176 3u5r_E Uncharacterized protein 99.3 6.2E-12 2.1E-16 96.1 9.6 65 96-161 57-159 (218)
177 3cmi_A Peroxiredoxin HYR1; thi 99.3 8.8E-12 3E-16 91.4 8.7 84 96-180 31-168 (171)
178 2obi_A PHGPX, GPX-4, phospholi 99.3 1E-11 3.5E-16 92.1 9.0 84 96-183 46-183 (183)
179 1xvw_A Hypothetical protein RV 99.3 1.6E-11 5.5E-16 88.7 9.8 87 96-182 34-158 (160)
180 2gs3_A PHGPX, GPX-4, phospholi 99.3 1.1E-11 3.9E-16 92.1 7.8 43 96-138 48-91 (185)
181 2ls5_A Uncharacterized protein 98.9 4.8E-13 1.6E-17 96.7 0.0 81 96-181 32-145 (159)
182 1hyu_A AHPF, alkyl hydroperoxi 99.3 3E-11 1E-15 103.6 11.1 78 96-181 116-197 (521)
183 2hls_A Protein disulfide oxido 99.3 1.1E-11 3.7E-16 96.5 7.5 94 76-181 7-114 (243)
184 1zof_A Alkyl hydroperoxide-red 99.3 2.1E-11 7.3E-16 91.5 8.8 86 96-181 32-158 (198)
185 2lus_A Thioredoxion; CR-Trp16, 98.9 5.7E-13 2E-17 94.3 0.0 67 96-162 24-125 (143)
186 3kp9_A Vkorc1/thioredoxin doma 99.2 1.4E-12 4.9E-17 103.9 1.4 67 100-180 200-276 (291)
187 2b7k_A SCO1 protein; metalloch 99.2 5.1E-11 1.8E-15 89.8 9.9 87 96-182 40-181 (200)
188 1we0_A Alkyl hydroperoxide red 99.2 2.9E-11 9.8E-16 89.9 8.0 71 96-166 30-139 (187)
189 2bmx_A Alkyl hydroperoxidase C 99.2 5.4E-11 1.8E-15 89.1 8.6 86 96-181 44-167 (195)
190 1qmv_A Human thioredoxin perox 99.2 1.1E-10 3.8E-15 87.5 10.2 86 96-181 33-160 (197)
191 2jsy_A Probable thiol peroxida 99.2 2.2E-10 7.6E-15 83.3 11.3 70 96-166 43-148 (167)
192 1ego_A Glutaredoxin; electron 99.2 4.7E-11 1.6E-15 77.4 6.6 70 101-181 3-81 (85)
193 3uem_A Protein disulfide-isome 99.2 4.6E-11 1.6E-15 97.4 8.0 97 77-182 119-228 (361)
194 1uul_A Tryparedoxin peroxidase 99.2 1.5E-10 5.2E-15 87.2 9.9 86 96-181 35-162 (202)
195 2i3y_A Epididymal secretory gl 99.2 1.4E-10 4.7E-15 88.8 9.4 42 96-138 55-97 (215)
196 3ztl_A Thioredoxin peroxidase; 99.1 1.8E-10 6.1E-15 88.3 9.6 85 96-180 68-194 (222)
197 1xzo_A BSSCO, hypothetical pro 99.1 2.5E-10 8.6E-15 83.3 8.9 43 96-138 32-78 (174)
198 2h01_A 2-Cys peroxiredoxin; th 99.1 4.1E-10 1.4E-14 84.0 9.8 86 96-181 30-156 (192)
199 2k8s_A Thioredoxin; dimer, str 99.1 5.5E-11 1.9E-15 76.6 4.1 63 101-166 4-71 (80)
200 1zye_A Thioredoxin-dependent p 99.1 4E-10 1.4E-14 86.2 9.6 86 96-181 55-182 (220)
201 2r37_A Glutathione peroxidase 99.1 4.7E-10 1.6E-14 85.3 9.4 42 96-138 37-79 (207)
202 2i81_A 2-Cys peroxiredoxin; st 99.1 6.1E-10 2.1E-14 84.9 9.9 85 96-180 51-176 (213)
203 3gkn_A Bacterioferritin comigr 99.0 1.8E-09 6.1E-14 78.1 10.5 86 96-182 34-160 (163)
204 1xvq_A Thiol peroxidase; thior 99.0 6.5E-10 2.2E-14 81.9 7.3 67 96-164 43-147 (175)
205 4gqc_A Thiol peroxidase, perox 99.0 2.4E-10 8.2E-15 83.6 4.2 78 85-166 25-141 (164)
206 2a4v_A Peroxiredoxin DOT5; yea 99.0 1E-08 3.6E-13 73.9 12.5 84 97-181 35-155 (159)
207 4g2e_A Peroxiredoxin; redox pr 99.0 6E-10 2.1E-14 80.8 5.3 86 96-181 29-155 (157)
208 2c0d_A Thioredoxin peroxidase 99.0 3.1E-09 1E-13 81.5 9.5 85 96-180 55-180 (221)
209 3ixr_A Bacterioferritin comigr 99.0 9.3E-09 3.2E-13 76.0 11.5 85 96-181 50-175 (179)
210 2pn8_A Peroxiredoxin-4; thiore 99.0 2.8E-09 9.7E-14 81.0 8.8 85 96-180 47-173 (211)
211 1n8j_A AHPC, alkyl hydroperoxi 98.9 4.7E-09 1.6E-13 78.1 9.2 85 96-180 29-152 (186)
212 3me7_A Putative uncharacterize 98.9 7.6E-09 2.6E-13 75.8 9.6 83 96-182 27-160 (170)
213 3gyk_A 27KDA outer membrane pr 98.9 4.7E-09 1.6E-13 76.9 7.6 41 96-137 21-61 (175)
214 1psq_A Probable thiol peroxida 98.9 1.1E-08 3.7E-13 74.2 8.5 85 96-181 41-162 (163)
215 3qpm_A Peroxiredoxin; oxidored 98.8 1.6E-08 5.5E-13 78.4 9.6 85 96-180 76-202 (240)
216 1eej_A Thiol:disulfide interch 98.8 5.4E-09 1.9E-13 79.7 6.8 76 96-181 85-208 (216)
217 4hde_A SCO1/SENC family lipopr 98.8 3.3E-08 1.1E-12 72.5 10.6 43 96-138 31-77 (170)
218 3uma_A Hypothetical peroxiredo 98.8 1.1E-08 3.8E-13 76.3 7.8 85 96-180 55-182 (184)
219 1h75_A Glutaredoxin-like prote 98.8 4.3E-09 1.5E-13 67.4 4.8 67 101-182 3-76 (81)
220 1q98_A Thiol peroxidase, TPX; 98.8 1.3E-08 4.3E-13 74.1 7.8 69 96-165 42-149 (165)
221 2yzh_A Probable thiol peroxida 98.8 1.9E-08 6.6E-13 73.4 8.4 43 96-139 46-89 (171)
222 1kte_A Thioltransferase; redox 98.8 3E-09 1E-13 71.6 3.2 58 100-160 13-80 (105)
223 2cq9_A GLRX2 protein, glutared 98.8 5.5E-09 1.9E-13 73.6 4.3 66 83-160 17-92 (130)
224 3a2v_A Probable peroxiredoxin; 98.8 2E-08 6.9E-13 78.4 7.6 86 96-181 32-159 (249)
225 1r7h_A NRDH-redoxin; thioredox 98.7 3.7E-08 1.3E-12 61.8 7.3 65 101-180 3-74 (75)
226 3tjj_A Peroxiredoxin-4; thiore 98.7 2.8E-08 9.4E-13 77.8 8.0 85 96-180 90-216 (254)
227 3p7x_A Probable thiol peroxida 98.7 3.9E-08 1.3E-12 71.4 8.3 84 96-181 45-165 (166)
228 1un2_A DSBA, thiol-disulfide i 98.7 4.4E-09 1.5E-13 79.3 2.6 45 96-140 112-159 (197)
229 1nm3_A Protein HI0572; hybrid, 98.7 1.1E-07 3.6E-12 73.4 9.8 72 96-167 32-145 (241)
230 2ht9_A Glutaredoxin-2; thiored 98.7 1.1E-08 3.6E-13 73.6 3.8 66 82-159 38-113 (146)
231 1t3b_A Thiol:disulfide interch 98.7 2.6E-08 8.9E-13 75.7 6.2 77 96-182 85-209 (211)
232 3zrd_A Thiol peroxidase; oxido 98.7 1.2E-07 3.9E-12 71.4 9.1 69 96-165 77-184 (200)
233 2hze_A Glutaredoxin-1; thiored 98.7 4.9E-09 1.7E-13 72.0 1.2 60 98-160 18-87 (114)
234 1prx_A HORF6; peroxiredoxin, h 98.6 1.9E-07 6.4E-12 71.6 9.7 41 99-139 34-75 (224)
235 2pwj_A Mitochondrial peroxired 98.6 3.4E-08 1.2E-12 72.5 5.3 43 97-139 44-89 (171)
236 3mng_A Peroxiredoxin-5, mitoch 98.6 6.6E-08 2.3E-12 71.3 6.8 85 96-181 42-172 (173)
237 3h93_A Thiol:disulfide interch 98.6 2.6E-07 9E-12 68.6 9.4 43 96-138 24-66 (192)
238 2l4c_A Endoplasmic reticulum r 98.6 8.8E-07 3E-11 61.8 11.0 92 75-182 21-122 (124)
239 2v2g_A Peroxiredoxin 6; oxidor 98.5 8.4E-07 2.9E-11 68.4 10.7 44 96-139 28-73 (233)
240 3c1r_A Glutaredoxin-1; oxidize 98.5 1.8E-07 6.1E-12 64.6 5.5 67 84-159 16-93 (118)
241 3hd5_A Thiol:disulfide interch 98.5 2.2E-07 7.6E-12 69.1 6.2 43 96-138 24-66 (195)
242 1xcc_A 1-Cys peroxiredoxin; un 98.5 6.7E-07 2.3E-11 68.3 8.7 41 99-139 34-75 (220)
243 1v58_A Thiol:disulfide interch 98.5 4.4E-07 1.5E-11 70.2 7.6 40 96-137 96-135 (241)
244 1tp9_A Peroxiredoxin, PRX D (t 98.4 3.1E-07 1.1E-11 66.5 6.2 44 96-139 34-81 (162)
245 2yan_A Glutaredoxin-3; oxidore 98.4 9.2E-07 3.2E-11 59.5 8.0 63 84-158 8-82 (105)
246 2wfc_A Peroxiredoxin 5, PRDX5; 98.4 3E-07 1E-11 67.3 5.9 44 96-139 30-77 (167)
247 2ec4_A FAS-associated factor 1 98.4 2.9E-06 9.8E-11 62.8 9.6 99 84-182 38-170 (178)
248 3qmx_A Glutaredoxin A, glutare 98.4 1.7E-06 5.8E-11 57.8 7.6 57 96-158 13-77 (99)
249 3hz8_A Thiol:disulfide interch 98.3 7.3E-07 2.5E-11 66.6 5.9 45 96-140 23-67 (193)
250 3rhb_A ATGRXC5, glutaredoxin-C 98.3 1.2E-06 4.1E-11 59.7 6.5 65 83-159 9-84 (113)
251 3sbc_A Peroxiredoxin TSA1; alp 98.3 5E-06 1.7E-10 63.4 9.8 111 60-180 23-177 (216)
252 4f9z_D Endoplasmic reticulum r 98.3 7.5E-06 2.6E-10 62.4 10.8 96 77-182 115-223 (227)
253 1fov_A Glutaredoxin 3, GRX3; a 98.2 4.1E-06 1.4E-10 53.2 7.3 65 101-181 3-74 (82)
254 2znm_A Thiol:disulfide interch 98.2 7.2E-06 2.5E-10 60.7 9.6 43 96-138 21-63 (195)
255 2klx_A Glutaredoxin; thioredox 98.2 1.4E-06 4.8E-11 56.6 5.0 52 100-158 7-65 (89)
256 3ic4_A Glutaredoxin (GRX-1); s 98.2 2.6E-06 8.8E-11 55.6 5.2 66 101-180 14-91 (92)
257 3l9v_A Putative thiol-disulfid 98.2 9E-07 3.1E-11 65.9 3.0 44 96-139 13-59 (189)
258 2khp_A Glutaredoxin; thioredox 98.1 6.2E-06 2.1E-10 53.7 6.5 53 100-158 7-66 (92)
259 3nzn_A Glutaredoxin; structura 98.1 9.9E-06 3.4E-10 54.2 7.4 70 98-180 21-102 (103)
260 2lqo_A Putative glutaredoxin R 98.1 1.1E-05 3.6E-10 53.3 6.9 68 101-182 6-82 (92)
261 3msz_A Glutaredoxin 1; alpha-b 98.1 4.6E-06 1.6E-10 53.7 5.0 69 99-181 4-84 (89)
262 3h8q_A Thioredoxin reductase 3 98.0 9.9E-06 3.4E-10 55.3 6.2 64 83-158 7-80 (114)
263 1wik_A Thioredoxin-like protei 98.0 2.8E-05 9.6E-10 52.5 8.2 64 83-158 5-80 (109)
264 3ctg_A Glutaredoxin-2; reduced 98.0 3.3E-06 1.1E-10 59.1 3.0 69 82-159 26-105 (129)
265 3tue_A Tryparedoxin peroxidase 98.0 5.2E-05 1.8E-09 57.8 9.5 111 60-180 26-181 (219)
266 3keb_A Probable thiol peroxida 98.0 3.1E-05 1.1E-09 59.3 8.3 39 96-138 47-91 (224)
267 3feu_A Putative lipoprotein; a 97.9 7.8E-06 2.7E-10 60.6 4.0 42 97-140 22-63 (185)
268 4f9z_D Endoplasmic reticulum r 97.9 5.9E-05 2E-09 57.4 8.8 92 75-182 9-110 (227)
269 1sji_A Calsequestrin 2, calseq 97.9 0.00011 3.9E-09 59.3 10.9 91 77-182 125-223 (350)
270 3gv1_A Disulfide interchange p 97.8 7.5E-05 2.6E-09 53.4 7.4 37 96-137 13-49 (147)
271 4dvc_A Thiol:disulfide interch 97.8 0.00011 3.6E-09 53.5 8.1 42 96-137 20-61 (184)
272 1z6m_A Conserved hypothetical 97.7 7.6E-05 2.6E-09 54.2 6.7 43 96-138 26-70 (175)
273 2rem_A Disulfide oxidoreductas 97.7 8E-05 2.7E-09 54.8 6.5 43 96-138 24-66 (193)
274 3us3_A Calsequestrin-1; calciu 97.7 0.00013 4.4E-09 59.6 8.0 91 77-182 127-225 (367)
275 4eo3_A Bacterioferritin comigr 97.7 0.00021 7.1E-09 57.5 9.1 70 96-168 23-124 (322)
276 3l9s_A Thiol:disulfide interch 97.6 5.9E-05 2E-09 56.1 4.1 44 96-139 20-66 (191)
277 4f82_A Thioredoxin reductase; 97.5 0.0002 6.9E-09 52.7 6.4 49 86-139 41-93 (176)
278 2h8l_A Protein disulfide-isome 97.5 0.00071 2.4E-08 52.1 9.6 91 77-182 8-111 (252)
279 2wci_A Glutaredoxin-4; redox-a 97.5 0.00021 7.1E-09 50.4 5.7 64 84-158 26-100 (135)
280 3l4n_A Monothiol glutaredoxin- 97.4 0.00035 1.2E-08 48.7 5.8 69 83-158 4-80 (127)
281 3zyw_A Glutaredoxin-3; metal b 97.4 0.00046 1.6E-08 46.8 6.2 56 96-158 14-81 (111)
282 3ec3_A Protein disulfide-isome 97.2 0.0024 8.1E-08 49.2 9.1 91 77-182 8-113 (250)
283 3ipz_A Monothiol glutaredoxin- 97.1 0.002 6.8E-08 43.3 7.2 56 96-158 16-83 (109)
284 3c7m_A Thiol:disulfide interch 97.1 0.0011 3.7E-08 48.6 6.1 44 96-139 16-60 (195)
285 3gx8_A Monothiol glutaredoxin- 97.0 0.0045 1.5E-07 42.5 8.6 60 96-158 14-84 (121)
286 2r2j_A Thioredoxin domain-cont 97.0 0.0039 1.3E-07 50.9 9.6 96 79-182 223-327 (382)
287 3bj5_A Protein disulfide-isome 96.8 0.01 3.5E-07 42.0 9.0 95 78-182 17-125 (147)
288 2wem_A Glutaredoxin-related pr 96.8 0.0025 8.5E-08 43.7 5.4 63 84-158 11-86 (118)
289 1t1v_A SH3BGRL3, SH3 domain-bi 96.7 0.0072 2.4E-07 39.1 6.9 52 101-158 4-70 (93)
290 2axo_A Hypothetical protein AT 96.5 0.021 7.2E-07 44.7 9.8 74 98-180 43-139 (270)
291 2ct6_A SH3 domain-binding glut 96.5 0.011 3.8E-07 39.7 7.0 53 100-158 9-82 (111)
292 1nm3_A Protein HI0572; hybrid, 96.4 0.0079 2.7E-07 45.7 6.6 55 98-158 169-229 (241)
293 3gha_A Disulfide bond formatio 96.0 0.015 5.1E-07 43.3 6.0 45 96-140 28-75 (202)
294 3ec3_A Protein disulfide-isome 95.6 0.058 2E-06 41.2 8.3 94 77-182 118-226 (250)
295 3f4s_A Alpha-DSBA1, putative u 95.5 0.028 9.4E-07 42.7 6.1 44 96-139 38-84 (226)
296 2wul_A Glutaredoxin related pr 95.4 0.029 9.8E-07 38.4 5.4 65 83-158 10-86 (118)
297 3gn3_A Putative protein-disulf 95.4 0.028 9.7E-07 41.1 5.5 43 96-138 13-56 (182)
298 3tdg_A DSBG, putative uncharac 95.0 0.028 9.6E-07 44.0 4.9 40 96-137 146-185 (273)
299 2h8l_A Protein disulfide-isome 95.0 0.067 2.3E-06 40.8 7.0 80 97-182 129-228 (252)
300 3ed3_A Protein disulfide-isome 94.9 0.088 3E-06 41.4 7.6 75 56-140 126-200 (298)
301 1aba_A Glutaredoxin; electron 94.9 0.058 2E-06 34.1 5.4 32 101-138 2-37 (87)
302 3bci_A Disulfide bond protein 94.9 0.068 2.3E-06 38.7 6.4 43 96-138 10-55 (186)
303 2jad_A Yellow fluorescent prot 94.8 0.037 1.2E-06 45.1 5.2 60 97-158 260-328 (362)
304 3gmf_A Protein-disulfide isome 94.6 0.088 3E-06 39.2 6.6 43 96-138 14-59 (205)
305 1xiy_A Peroxiredoxin, pfaop; a 94.1 0.077 2.7E-06 38.9 5.1 44 96-139 42-90 (182)
306 2kok_A Arsenate reductase; bru 93.9 0.17 5.8E-06 34.3 6.3 34 101-140 7-40 (120)
307 1u6t_A SH3 domain-binding glut 93.6 0.24 8.2E-06 33.9 6.5 57 100-158 1-74 (121)
308 2x8g_A Thioredoxin glutathione 93.4 0.079 2.7E-06 45.6 4.6 64 84-159 9-82 (598)
309 2xhf_A Peroxiredoxin 5; oxidor 93.2 0.074 2.5E-06 38.6 3.6 45 96-140 41-88 (171)
310 1z3e_A Regulatory protein SPX; 91.4 0.27 9.3E-06 33.8 4.6 34 101-140 3-36 (132)
311 2g2q_A Glutaredoxin-2; thiored 90.8 0.54 1.8E-05 31.8 5.3 37 98-138 2-38 (124)
312 3l78_A Regulatory protein SPX; 88.6 0.65 2.2E-05 31.4 4.6 34 101-140 2-35 (120)
313 1rw1_A Conserved hypothetical 86.9 0.51 1.8E-05 31.5 3.2 34 101-140 2-35 (114)
314 3kzq_A Putative uncharacterize 85.0 1.8 6.1E-05 31.7 5.6 38 99-136 3-40 (208)
315 3fz4_A Putative arsenate reduc 84.2 1.6 5.4E-05 29.5 4.6 35 101-141 5-39 (120)
316 2in3_A Hypothetical protein; D 82.5 3.7 0.00013 29.8 6.5 39 98-136 7-45 (216)
317 3gkx_A Putative ARSC family re 82.4 1.2 4.2E-05 30.0 3.4 35 101-141 6-40 (120)
318 3fhk_A UPF0403 protein YPHP; d 81.8 11 0.00037 26.3 9.7 104 75-182 26-146 (147)
319 1s3c_A Arsenate reductase; ARS 80.5 1.1 3.9E-05 31.1 2.8 34 101-140 4-37 (141)
320 3q6o_A Sulfhydryl oxidase 1; p 77.8 8.3 0.00028 28.6 7.2 85 82-181 144-237 (244)
321 3rdw_A Putative arsenate reduc 71.1 2 6.8E-05 29.0 1.9 44 101-150 7-56 (121)
322 3f0i_A Arsenate reductase; str 69.5 2.8 9.7E-05 28.1 2.4 33 101-139 6-38 (119)
323 2imf_A HCCA isomerase, 2-hydro 61.8 13 0.00044 26.7 4.9 35 100-134 2-36 (203)
324 4g9p_A 4-hydroxy-3-methylbut-2 60.1 48 0.0017 27.1 8.3 53 129-181 335-400 (406)
325 3noy_A 4-hydroxy-3-methylbut-2 55.8 12 0.00039 30.4 3.9 74 105-182 273-359 (366)
326 1t4y_A Adaptive-response senso 54.3 43 0.0015 22.0 8.5 75 100-179 13-94 (105)
327 3ktb_A Arsenical resistance op 52.7 19 0.00065 23.7 4.0 60 116-180 26-102 (106)
328 1xg8_A Hypothetical protein SA 51.8 45 0.0016 21.9 5.6 79 98-182 6-107 (111)
329 3t58_A Sulfhydryl oxidase 1; o 49.7 38 0.0013 28.5 6.5 67 82-159 144-219 (519)
330 2in3_A Hypothetical protein; D 44.5 35 0.0012 24.4 4.9 37 144-180 168-210 (216)
331 1hyu_A AHPF, alkyl hydroperoxi 42.2 57 0.0019 27.2 6.4 82 84-180 8-92 (521)
332 1r4w_A Glutathione S-transfera 39.7 20 0.00069 26.2 2.9 28 99-126 6-33 (226)
333 3vhs_A ATPase wrnip1; zinc fin 36.0 3.4 0.00012 19.9 -1.3 11 108-118 8-18 (29)
334 2npb_A Selenoprotein W; struct 32.2 62 0.0021 20.7 4.0 65 108-180 9-81 (96)
335 3kgk_A Arsenical resistance op 30.5 1.2E+02 0.004 20.0 5.8 46 129-180 40-99 (110)
336 2jvx_A NF-kappa-B essential mo 28.0 9.9 0.00034 18.7 -0.4 18 109-126 6-23 (28)
337 3feu_A Putative lipoprotein; a 27.0 37 0.0013 24.0 2.5 34 144-181 144-181 (185)
338 3kzq_A Putative uncharacterize 26.3 92 0.0032 22.1 4.6 38 144-181 161-204 (208)
339 3tfg_A ALR2278 protein; heme-b 26.2 1.2E+02 0.0041 21.6 5.1 43 97-139 127-169 (189)
340 1wwj_A Circadian clock protein 26.1 1E+02 0.0036 20.1 4.2 53 98-151 7-60 (105)
341 3szu_A ISPH, 4-hydroxy-3-methy 26.1 2.4E+02 0.0084 22.3 7.4 99 81-181 181-296 (328)
342 2p0g_A Selenoprotein W-related 20.5 1.8E+02 0.0063 18.8 5.9 63 108-182 10-79 (105)
No 1
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.92 E-value=1.4e-24 Score=149.09 Aligned_cols=97 Identities=25% Similarity=0.546 Sum_probs=87.9
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE-----
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS----- 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~----- 151 (183)
+.+|++.++|++.+..+ ++++++|+|||+||+||+.+.|.++++++.+ +++.|++||++++++ ++++|+|+
T Consensus 2 V~~i~~~~~f~~~l~~~--~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~-~~~~~~~vd~d~~~~-l~~~~~V~~~PT~ 77 (105)
T 3zzx_A 2 VYQVKDQEDFTKQLNEA--GNKLVVIDFYATWCGPCKMIAPKLEELSQSM-SDVVFLKVDVDECED-IAQDNQIACMPTF 77 (105)
T ss_dssp CEECCSHHHHHHHHHHT--TTSEEEEEEECTTCHHHHHHHHHHHHHHHHC-TTEEEEEEETTTCHH-HHHHTTCCBSSEE
T ss_pred eEEeCCHHHHHHHHHhc--CCCEEEEEEECCCCCCccCCCcchhhhhhcc-CCeEEEEEecccCHH-HHHHcCCCeecEE
Confidence 35788999999999653 6789999999999999999999999999998 679999999999998 99999999
Q ss_pred -EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 -IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 -~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
++++|++++++.|. +. ++|.++|+++
T Consensus 78 ~~~~~G~~v~~~~G~-~~----~~l~~~i~k~ 104 (105)
T 3zzx_A 78 LFMKNGQKLDSLSGA-NY----DKLLELVEKN 104 (105)
T ss_dssp EEEETTEEEEEEESC-CH----HHHHHHHHHH
T ss_pred EEEECCEEEEEEeCc-CH----HHHHHHHHhc
Confidence 88999999999996 44 7899999886
No 2
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.91 E-value=2.4e-24 Score=156.58 Aligned_cols=99 Identities=15% Similarity=0.255 Sum_probs=86.5
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE-----
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS----- 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~----- 151 (183)
+..+++.++|++.+.. +.+++|||+|||+|||||+.+.|.|+++++++.+++.|++||+|++++ ++.+|+|.
T Consensus 23 v~~l~t~~~f~~~v~~--~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe~~e-~a~~y~V~siPT~ 99 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVN--EDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITEVPD-FNTMYELYDPVSV 99 (160)
T ss_dssp CEECCSHHHHHHHHHH--CSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCT-TTTTTTCCSSEEE
T ss_pred hhccCCHHHHHHHHHh--cCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCCCHH-HHHHcCCCCCCEE
Confidence 5679999999988842 367899999999999999999999999999997789999999999998 99999999
Q ss_pred -EeeCCeEE--E-------EEecCcc-hhhHHHHHHHHHHhh
Q 030114 152 -IWKDGEMK--S-------EVIGGHK-AWLVIEEVREMIKKF 182 (183)
Q Consensus 152 -~~~~Gk~v--~-------~~~G~~~-~~~~~~~l~~~i~~~ 182 (183)
+|++|+.+ + +++|..+ + ++|.++|+++
T Consensus 100 ~fFk~G~~v~vd~Gtgd~~k~vGa~~~k----~~l~~~ie~~ 137 (160)
T 2av4_A 100 MFFYRNKHMMIDLGTGNNNKINWPMNNK----QEFIDIVETI 137 (160)
T ss_dssp EEEETTEEEEEECSSSCCSCBCSCCCCH----HHHHHHHHHH
T ss_pred EEEECCEEEEEecCCCCcCeEEeecCCH----HHHHHHHHHH
Confidence 79999998 5 8999987 7 5555555543
No 3
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.89 E-value=4.5e-23 Score=147.32 Aligned_cols=97 Identities=10% Similarity=0.070 Sum_probs=84.5
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCCC--hhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE---
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWC--RKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS--- 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC--~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~--- 151 (183)
...++ .++|++.+. +.+++++|+|||+|| +||+.+.|.+++++++|.++++|++||+|++++ ++.+|+|+
T Consensus 17 ~~~vt-~~~F~~~v~---~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe~~~-la~~ygV~siP 91 (137)
T 2qsi_A 17 PTLVD-EATVDDFIA---HSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAEAERG-LMARFGVAVCP 91 (137)
T ss_dssp CEEEC-TTTHHHHHH---TSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGGHHH-HHHHHTCCSSS
T ss_pred CcccC-HhHHHHHHh---cCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECCCCHH-HHHHcCCccCC
Confidence 44564 578998883 344599999999999 999999999999999998899999999999998 99999999
Q ss_pred ---EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 ---IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 ---~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
+|+||+++.+++|..++ ++|.++|+++
T Consensus 92 TlilFkdG~~v~~~vG~~~k----~~l~~~l~~~ 121 (137)
T 2qsi_A 92 SLAVVQPERTLGVIAKIQDW----SSYLAQIGAM 121 (137)
T ss_dssp EEEEEECCEEEEEEESCCCH----HHHHHHHHHH
T ss_pred EEEEEECCEEEEEEeCCCCH----HHHHHHHHHH
Confidence 99999999999999999 5666666544
No 4
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.88 E-value=7.9e-23 Score=146.55 Aligned_cols=96 Identities=14% Similarity=0.167 Sum_probs=85.4
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCC--ChhhhhhhHHHHHHHHHhcCC-eEEEEEEcCCChHHHHHhcCeE--
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASW--CRKCIYLKPKLEKLAAEFDTK-LKFYYVDVNKVSKDLVKRGNIS-- 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~w--C~~C~~~~p~l~~la~~~~~~-v~~~~vd~d~~~~~~~~~~~i~-- 151 (183)
+..+ +.++|++.+ .++++|||+|||+| ||||+.+.|.|++++++|.++ ++|++||+|++++ ++.+|+|+
T Consensus 19 ~~~~-t~~~F~~~v----~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~~-lA~~ygV~sI 92 (140)
T 2qgv_A 19 WTPV-SESRLDDWL----TQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEA-IGDRFGAFRF 92 (140)
T ss_dssp CEEC-CHHHHHHHH----HTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHHH-HHHHHTCCSS
T ss_pred CccC-CHHHHHHHH----hCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCHH-HHHHcCCccC
Confidence 3445 468899998 46789999999999 999999999999999999888 9999999999998 99999999
Q ss_pred ----EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 ----IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 ----~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
+|+||+++.+++|..++ ++|.++|+++
T Consensus 93 PTlilFk~G~~v~~~~G~~~k----~~l~~~i~~~ 123 (140)
T 2qgv_A 93 PATLVFTGGNYRGVLNGIHPW----AELINLMRGL 123 (140)
T ss_dssp SEEEEEETTEEEEEEESCCCH----HHHHHHHHHH
T ss_pred CEEEEEECCEEEEEEecCCCH----HHHHHHHHHH
Confidence 99999999999999998 6666666654
No 5
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.87 E-value=1.8e-22 Score=137.63 Aligned_cols=97 Identities=12% Similarity=0.180 Sum_probs=74.2
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE-----
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS----- 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~----- 151 (183)
|.++++.++|++.+ +.+++++|+|||+||++|+.+.|.++++++++ +++.|+.||++++++ ++++|+|.
T Consensus 2 m~~i~~~~~~~~~~----~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~-~~~~~~~vd~~~~~~-l~~~~~v~~~Pt~ 75 (105)
T 4euy_A 2 MNTFKTIEELATYI----EEQQLVLLFIKTENCGVCDVMLRKVNYVLENY-NYVEKIEILLQDMQE-IAGRYAVFTGPTV 75 (105)
T ss_dssp --------CCSSST----TCSSEEEEEEEESSCHHHHHHHHHHHHHHHTC-TTEEEEEEEECCC----------CCCCEE
T ss_pred ccccCCHHHHHHHH----hcCCCEEEEEeCCCCcchHHHHHHHHHHHHHc-CCceEEEEECCCCHH-HHHhcCCCCCCEE
Confidence 56778888888888 68999999999999999999999999999999 689999999999998 99999998
Q ss_pred -EeeCCeEEEEEecCcchhhHHHHHHHHHHhhC
Q 030114 152 -IWKDGEMKSEVIGGHKAWLVIEEVREMIKKFV 183 (183)
Q Consensus 152 -~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~l 183 (183)
++++|+++.++.|..+. ++|.++|++++
T Consensus 76 ~~~~~G~~~~~~~g~~~~----~~l~~~l~~~~ 104 (105)
T 4euy_A 76 LLFYNGKEILRESRFISL----ENLERTIQLFE 104 (105)
T ss_dssp EEEETTEEEEEEESSCCH----HHHHHHHHTTC
T ss_pred EEEeCCeEEEEEeCCcCH----HHHHHHHHHhh
Confidence 77999999999999988 88888888764
No 6
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.86 E-value=3.3e-21 Score=133.87 Aligned_cols=98 Identities=21% Similarity=0.473 Sum_probs=87.1
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE-----
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS----- 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~----- 151 (183)
.....+.++|++++... .+++++|+|||+||++|+.+.|.|+++++++++ +.|+.||++++++ ++++|+|.
T Consensus 13 ~~~~~t~~~f~~~l~~~--~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~~~~-l~~~~~v~~~Pt~ 88 (116)
T 3qfa_C 13 VKQIESKTAFQEALDAA--GDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVDDCQD-VASECEVKSMPTF 88 (116)
T ss_dssp CBCCCCHHHHHHHHHHH--TTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEETTTTHH-HHHHTTCCSSSEE
T ss_pred ccCCCCHHHHHHHHHhc--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHH-HHHHcCCccccEE
Confidence 33466789999999432 799999999999999999999999999999944 9999999999998 99999999
Q ss_pred -EeeCCeEEEEEecCcchhhHHHHHHHHHHhhC
Q 030114 152 -IWKDGEMKSEVIGGHKAWLVIEEVREMIKKFV 183 (183)
Q Consensus 152 -~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~l 183 (183)
++++|+++.++.|. +. ++|.++|+++|
T Consensus 89 ~~~~~G~~~~~~~G~-~~----~~l~~~l~~~l 116 (116)
T 3qfa_C 89 QFFKKGQKVGEFSGA-NK----EKLEATINELV 116 (116)
T ss_dssp EEESSSSEEEEEESC-CH----HHHHHHHHHHC
T ss_pred EEEeCCeEEEEEcCC-CH----HHHHHHHHHhC
Confidence 77999999999999 76 88999988765
No 7
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.85 E-value=1.2e-20 Score=128.70 Aligned_cols=98 Identities=17% Similarity=0.352 Sum_probs=86.9
Q ss_pred ceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE----
Q 030114 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS---- 151 (183)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~---- 151 (183)
.+.++++.++|++.+.. ..+++++|+||++||++|+.+.|.++++++++ +++.|+.+|++++++ ++++|+|.
T Consensus 2 ~v~~i~~~~~~~~~~~~--~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~-~~~~~~~vd~~~~~~-~~~~~~v~~~Pt 77 (107)
T 1gh2_A 2 GVKPVGSDPDFQPELSG--AGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKY-PQAVFLEVDVHQCQG-TAATNNISATPT 77 (107)
T ss_dssp CEEEECSGGGHHHHHHH--TTTSCEEEEEECSSCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTSHH-HHHHTTCCSSSE
T ss_pred ceEEecCHHHHHHHHHh--CCCCEEEEEEECCCChhhHHHHHHHHHHHHHC-CCcEEEEEECccCHH-HHHhcCCCcccE
Confidence 47789999999999853 26899999999999999999999999999999 789999999999988 99999998
Q ss_pred --EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 --IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 --~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
++++|+++.++.|..+ ++|.++|+++
T Consensus 78 ~~~~~~G~~~~~~~G~~~-----~~l~~~l~~~ 105 (107)
T 1gh2_A 78 FQFFRNKVRIDQYQGADA-----VGLEEKIKQH 105 (107)
T ss_dssp EEEEETTEEEEEEESSCH-----HHHHHHHHHH
T ss_pred EEEEECCeEEEEEeCCCH-----HHHHHHHHHh
Confidence 7799999999999766 3488887765
No 8
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.85 E-value=2.2e-20 Score=131.26 Aligned_cols=103 Identities=23% Similarity=0.506 Sum_probs=91.2
Q ss_pred ccceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE--
Q 030114 74 SVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS-- 151 (183)
Q Consensus 74 ~~~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~-- 151 (183)
...+.++.+.++|++.+..+...+++++|+||++||++|+.+.|.|+++++++ +++.|+.||+++.++ ++++|+|.
T Consensus 15 ~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~vd~d~~~~-l~~~~~v~~~ 92 (124)
T 1xfl_A 15 EGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKL-PNVLFLKVDTDELKS-VASDWAIQAM 92 (124)
T ss_dssp CSCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHC-SSEEEEEEETTTSHH-HHHHTTCCSS
T ss_pred CCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCcEEEEEECccCHH-HHHHcCCCcc
Confidence 34578899999999999766557999999999999999999999999999999 489999999999987 99999998
Q ss_pred ----EeeCCeEEEEEecCcchhhHHHHHHHHHHhhC
Q 030114 152 ----IWKDGEMKSEVIGGHKAWLVIEEVREMIKKFV 183 (183)
Q Consensus 152 ----~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~l 183 (183)
++++|+++.++.|. +. ++|.++|++++
T Consensus 93 Pt~~~~~~G~~~~~~~G~-~~----~~l~~~l~~~l 123 (124)
T 1xfl_A 93 PTFMFLKEGKILDKVVGA-KK----DELQSTIAKHL 123 (124)
T ss_dssp SEEEEEETTEEEEEEESC-CH----HHHHHHHHHHC
T ss_pred CEEEEEECCEEEEEEeCC-CH----HHHHHHHHHhc
Confidence 77899999999996 55 78888887764
No 9
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.85 E-value=1.3e-20 Score=129.10 Aligned_cols=101 Identities=26% Similarity=0.611 Sum_probs=88.6
Q ss_pred ceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE----
Q 030114 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS---- 151 (183)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~---- 151 (183)
.+..+++.++|++.+..+...+++++|+||++||++|+.+.|.|+++++++.+++.|+.+|++..++ ++++|+|.
T Consensus 3 ~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~-~~~~~~v~~~Pt 81 (112)
T 1ep7_A 3 SVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAA-VAEAAGITAMPT 81 (112)
T ss_dssp SEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTHH-HHHHHTCCBSSE
T ss_pred cEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCchHH-HHHHcCCCcccE
Confidence 4678888999999996432338999999999999999999999999999996689999999999987 99999998
Q ss_pred --EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 --IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 --~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
++++|+++.++.|. +. ++|.++|+++
T Consensus 82 ~~~~~~G~~~~~~~G~-~~----~~l~~~l~~~ 109 (112)
T 1ep7_A 82 FHVYKDGVKADDLVGA-SQ----DKLKALVAKH 109 (112)
T ss_dssp EEEEETTEEEEEEESC-CH----HHHHHHHHHH
T ss_pred EEEEECCeEEEEEcCC-CH----HHHHHHHHHH
Confidence 77899999999998 76 6777777765
No 10
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.85 E-value=2.1e-20 Score=126.53 Aligned_cols=98 Identities=22% Similarity=0.524 Sum_probs=88.2
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE-----
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS----- 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~----- 151 (183)
+.++++.++|++.+..+ .+++++|+||++||++|+.+.|.++++++++ +++.|+.+|++++++ ++++|+|.
T Consensus 2 v~~i~~~~~~~~~l~~~--~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~-~~~~~~~vd~~~~~~-~~~~~~v~~~Pt~ 77 (105)
T 3m9j_A 2 VKQIESKTAFQEALDAA--GDKLVVVDFSATWCGPCKMIKPFFHSLSEKY-SNVIFLEVDVDDCQD-VASESEVKSMPTF 77 (105)
T ss_dssp CEECCSHHHHHHHHHHT--TTSCEEEEEECTTCHHHHHHHHHHHHHHHHS-TTSEEEEEETTTCHH-HHHHTTCCBSSEE
T ss_pred eEEcCCHHHHHHHHHhc--CCCeEEEEEECCCChhhHHHHHHHHHHHHHc-cCeEEEEEEhhhhHH-HHHHcCCCcCcEE
Confidence 45788999999999532 7899999999999999999999999999999 459999999999988 99999998
Q ss_pred -EeeCCeEEEEEecCcchhhHHHHHHHHHHhhC
Q 030114 152 -IWKDGEMKSEVIGGHKAWLVIEEVREMIKKFV 183 (183)
Q Consensus 152 -~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~l 183 (183)
++++|+.+.++.|. +. ++|.++|+++|
T Consensus 78 ~~~~~g~~~~~~~g~-~~----~~l~~~l~~~l 105 (105)
T 3m9j_A 78 QFFKKGQKVGEFSGA-NK----EKLEATINELV 105 (105)
T ss_dssp EEEETTEEEEEEESS-CH----HHHHHHHHHHC
T ss_pred EEEECCeEEEEEeCC-CH----HHHHHHHHHhC
Confidence 77999999999999 76 88999988875
No 11
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.85 E-value=3.2e-20 Score=127.44 Aligned_cols=95 Identities=20% Similarity=0.611 Sum_probs=85.4
Q ss_pred EecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE------
Q 030114 78 EPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS------ 151 (183)
Q Consensus 78 ~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~------ 151 (183)
....+.++|++++ ..+++++|+||++||++|+.+.|.++++++++ +++.|+.||++++++ ++++|+|.
T Consensus 9 ~~~~~~~~f~~~~----~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~-~~~~~~~vd~~~~~~-l~~~~~v~~~Pt~~ 82 (109)
T 3f3q_A 9 TQFKTASEFDSAI----AQDKLVVVDFYATWCGPCKMIAPMIEKFSEQY-PQADFYKLDVDELGD-VAQKNEVSAMPTLL 82 (109)
T ss_dssp EECCSHHHHHHHT----TSSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTCHH-HHHHTTCCSSSEEE
T ss_pred cCCCCHHHHHHHH----hcCCEEEEEEECCcCHhHHHHHHHHHHHHHHC-CCCEEEEEECCCCHH-HHHHcCCCccCEEE
Confidence 3466788999998 68999999999999999999999999999999 569999999999998 99999999
Q ss_pred EeeCCeEEEEEecCcchhhHHHHHHHHHHhhC
Q 030114 152 IWKDGEMKSEVIGGHKAWLVIEEVREMIKKFV 183 (183)
Q Consensus 152 ~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~l 183 (183)
++++|+++.++.|. +. ++|+++|++++
T Consensus 83 ~~~~G~~~~~~~G~-~~----~~l~~~i~~~l 109 (109)
T 3f3q_A 83 LFKNGKEVAKVVGA-NP----AAIKQAIAANA 109 (109)
T ss_dssp EEETTEEEEEEESS-CH----HHHHHHHHHHC
T ss_pred EEECCEEEEEEeCC-CH----HHHHHHHHhhC
Confidence 77899999999999 44 78899888764
No 12
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.84 E-value=2.9e-20 Score=127.06 Aligned_cols=98 Identities=30% Similarity=0.600 Sum_probs=86.1
Q ss_pred ceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE----
Q 030114 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS---- 151 (183)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~---- 151 (183)
.+.++ +.++|++.+. ..+++++|+||++||++|+.+.|.++++++.+++++.|+.+|++++++ ++++|+|.
T Consensus 5 ~v~~l-~~~~~~~~~~---~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~-l~~~~~v~~~Pt 79 (111)
T 3gnj_A 5 SLEKL-DTNTFEQLIY---DEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEKT-LFQRFSLKGVPQ 79 (111)
T ss_dssp CSEEC-CHHHHHHHHT---TSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHH-HHHHTTCCSSCE
T ss_pred cceec-CHHHHHHHHH---hcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCcChh-HHHhcCCCcCCE
Confidence 35556 5778888883 468999999999999999999999999999997789999999999998 99999998
Q ss_pred --EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 --IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 --~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
++++|+.+.++.|..+. ++|.++|+++
T Consensus 80 ~~~~~~g~~~~~~~g~~~~----~~l~~~l~~~ 108 (111)
T 3gnj_A 80 ILYFKDGEYKGKMAGDVED----DEVEQMIADV 108 (111)
T ss_dssp EEEEETTEEEEEEESSCCH----HHHHHHHHHH
T ss_pred EEEEECCEEEEEEeccCCH----HHHHHHHHHH
Confidence 77999999999999988 6777777654
No 13
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.84 E-value=9.7e-21 Score=137.48 Aligned_cols=98 Identities=16% Similarity=0.312 Sum_probs=85.3
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE-----
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS----- 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~----- 151 (183)
+..+.+.++|++.+.. +.+++++|+|||+||++|+.+.|.|+++++++++++.|+.||+++.++ ++++|+|.
T Consensus 5 l~~i~~~~~~~~~i~~--~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~~~-l~~~~~v~~~Pt~ 81 (149)
T 3gix_A 5 LPKLTSKKEVDQAIKS--TAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTAV-YTQYFDISYIPST 81 (149)
T ss_dssp CCEECSHHHHHHHHHH--CCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTCCH-HHHHTTCCSSSEE
T ss_pred eeecCCHHHHHHHHHh--cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCcCHH-HHHHcCCCccCeE
Confidence 4567788999999842 358999999999999999999999999999997779999999999998 99999998
Q ss_pred -EeeCCeEE---------EEEec-CcchhhHHHHHHHHHHh
Q 030114 152 -IWKDGEMK---------SEVIG-GHKAWLVIEEVREMIKK 181 (183)
Q Consensus 152 -~~~~Gk~v---------~~~~G-~~~~~~~~~~l~~~i~~ 181 (183)
++++|+++ .++.| ..+. ++|.++|++
T Consensus 82 ~~~~~G~~v~~~~g~~~~~~~~G~~~~~----~~l~~~l~~ 118 (149)
T 3gix_A 82 VFFFNGQHMKVDYGSPDHTKFVGSFKTK----QDFIDLIEV 118 (149)
T ss_dssp EEEETTEEEEEECSSSCCSCEESCCSSH----HHHHHHHHH
T ss_pred EEEECCeEEEeecCCCCCCeEeeecCCH----HHHHHHHHH
Confidence 88999999 89999 8888 555555544
No 14
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.84 E-value=4.5e-20 Score=130.05 Aligned_cols=95 Identities=24% Similarity=0.470 Sum_probs=84.3
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE-----
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS----- 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~----- 151 (183)
+.++++.++|++++ ..+++++|+|||+||++|+.+.|.|+++++++ +++.|+.||++++++ ++++|+|.
T Consensus 21 v~~l~~~~~f~~~~----~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~-~~v~~~~vd~d~~~~-l~~~~~v~~~Pt~ 94 (125)
T 1r26_A 21 VVDVYSVEQFRNIM----SEDILTVAWFTAVWCGPCKTIERPMEKIAYEF-PTVKFAKVDADNNSE-IVSKCRVLQLPTF 94 (125)
T ss_dssp CEEECCHHHHHHHH----HSSSCEEEEEECTTCHHHHHTHHHHHHHHHHC-TTSEEEEEETTTCHH-HHHHTTCCSSSEE
T ss_pred eEECCCHHHHHHHH----ccCCEEEEEEECCcCHhHHHHHHHHHHHHHHC-CCCEEEEEECCCCHH-HHHHcCCCcccEE
Confidence 67788879999998 58999999999999999999999999999999 679999999999988 99999998
Q ss_pred -EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 -IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 -~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
++++|+++.++.|. +. ++|.++|+++
T Consensus 95 ~i~~~G~~~~~~~G~-~~----~~l~~~l~~~ 121 (125)
T 1r26_A 95 IIARSGKMLGHVIGA-NP----GMLRQKLRDI 121 (125)
T ss_dssp EEEETTEEEEEEESS-CH----HHHHHHHHHH
T ss_pred EEEeCCeEEEEEeCC-CH----HHHHHHHHHH
Confidence 77899999999994 55 5666666654
No 15
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.84 E-value=4.1e-20 Score=125.65 Aligned_cols=94 Identities=19% Similarity=0.525 Sum_probs=85.7
Q ss_pred CCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE------Eee
Q 030114 81 NDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS------IWK 154 (183)
Q Consensus 81 ~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~------~~~ 154 (183)
.+.++|++++ ..+++++|+||++||++|+.+.|.++++++.+++++.|+.+|++..++ ++++|+|. +++
T Consensus 9 l~~~~~~~~~----~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~i~~~Pt~~~~~ 83 (109)
T 3tco_A 9 LTEENFDEVI----RNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQK-IADKYSVLNIPTTLIFV 83 (109)
T ss_dssp CCTTTHHHHH----HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHH-HHHHTTCCSSSEEEEEE
T ss_pred ecHHHHHHHH----hcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccccCHH-HHHhcCcccCCEEEEEc
Confidence 3578899998 568999999999999999999999999999997789999999999998 99999998 779
Q ss_pred CCeEEEEEecCcchhhHHHHHHHHHHhhC
Q 030114 155 DGEMKSEVIGGHKAWLVIEEVREMIKKFV 183 (183)
Q Consensus 155 ~Gk~v~~~~G~~~~~~~~~~l~~~i~~~l 183 (183)
+|+++.++.|..+. ++|.++|++++
T Consensus 84 ~g~~~~~~~g~~~~----~~l~~~l~~~l 108 (109)
T 3tco_A 84 NGQLVDSLVGAVDE----DTLESTVNKYL 108 (109)
T ss_dssp TTEEEEEEESCCCH----HHHHHHHHHHC
T ss_pred CCcEEEeeeccCCH----HHHHHHHHHHh
Confidence 99999999999888 88888888764
No 16
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.84 E-value=3.1e-20 Score=128.66 Aligned_cols=97 Identities=22% Similarity=0.578 Sum_probs=87.1
Q ss_pred cceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE---
Q 030114 75 VELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS--- 151 (183)
Q Consensus 75 ~~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~--- 151 (183)
..+.++++.++|++++ +.+++++|+||++||++|+.+.|.|+++++++.+ +.|+.+|++++++ ++++|+|.
T Consensus 12 ~~~~~~~~~~~~~~~~----~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~-v~~~~vd~~~~~~-l~~~~~v~~~P 85 (114)
T 2oe3_A 12 TSITKLTNLTEFRNLI----KQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDVDESPD-IAKECEVTAMP 85 (114)
T ss_dssp GGSCBCCSHHHHHHHH----HHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETTTCHH-HHHHTTCCSBS
T ss_pred hheeecCCHHHHHHHH----hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHH-HHHHCCCCccc
Confidence 3567788999999988 5789999999999999999999999999999954 9999999999987 99999998
Q ss_pred ---EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 ---IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 ---~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
++++|+++.++.|.. . ++|.++|+++
T Consensus 86 t~~~~~~G~~~~~~~G~~-~----~~l~~~l~~~ 114 (114)
T 2oe3_A 86 TFVLGKDGQLIGKIIGAN-P----TALEKGIKDL 114 (114)
T ss_dssp EEEEEETTEEEEEEESSC-H----HHHHHHHHTC
T ss_pred EEEEEeCCeEEEEEeCCC-H----HHHHHHHHhC
Confidence 779999999999998 6 8888888753
No 17
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.84 E-value=5.3e-20 Score=128.15 Aligned_cols=100 Identities=24% Similarity=0.494 Sum_probs=87.5
Q ss_pred ceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE----
Q 030114 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS---- 151 (183)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~---- 151 (183)
.+..+.+.++|++.+..+...+++++|+||++||++|+.+.|.|+++++++.+ +.|+.||++++++ ++++|+|.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~~-~~~~~~v~~~Pt 90 (122)
T 2vlu_A 13 EVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN-AVFLKVDVDELKP-IAEQFSVEAMPT 90 (122)
T ss_dssp CCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHH-HHHHTTCCSSSE
T ss_pred cceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEECCCCHH-HHHHcCCCcccE
Confidence 35567788999999965444789999999999999999999999999999954 9999999999988 99999998
Q ss_pred --EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 --IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 --~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
++++|+++.++.|.. . ++|.++|+++
T Consensus 91 ~~~~~~G~~~~~~~G~~-~----~~l~~~l~~~ 118 (122)
T 2vlu_A 91 FLFMKEGDVKDRVVGAI-K----EELTAKVGLH 118 (122)
T ss_dssp EEEEETTEEEEEEESSC-H----HHHHHHHHHH
T ss_pred EEEEeCCEEEEEEeCcC-H----HHHHHHHHHH
Confidence 779999999999998 6 7777777664
No 18
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.84 E-value=5.4e-20 Score=124.59 Aligned_cols=97 Identities=25% Similarity=0.464 Sum_probs=87.4
Q ss_pred ceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE----
Q 030114 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS---- 151 (183)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~---- 151 (183)
.+.++ +.++|++.+ .+++++|+||++||++|+.+.|.++++++++++++.++.+|++++++ ++++|+|.
T Consensus 4 ~v~~l-~~~~~~~~~-----~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~v~~~Pt 76 (106)
T 3die_A 4 AIVKV-TDADFDSKV-----ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPS-TAAKYEVMSIPT 76 (106)
T ss_dssp CCEEC-CTTTHHHHS-----CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH-HHHHTTCCSBSE
T ss_pred ceEEC-CHHHHHHHh-----cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCHH-HHHhCCCcccCE
Confidence 35556 567788887 68999999999999999999999999999997789999999999998 99999999
Q ss_pred --EeeCCeEEEEEecCcchhhHHHHHHHHHHhhC
Q 030114 152 --IWKDGEMKSEVIGGHKAWLVIEEVREMIKKFV 183 (183)
Q Consensus 152 --~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~l 183 (183)
++++|+.+.++.|..+. ++|.++|+++|
T Consensus 77 ~~~~~~G~~~~~~~g~~~~----~~l~~~l~~~l 106 (106)
T 3die_A 77 LIVFKDGQPVDKVVGFQPK----ENLAEVLDKHL 106 (106)
T ss_dssp EEEEETTEEEEEEESCCCH----HHHHHHHHTTC
T ss_pred EEEEeCCeEEEEEeCCCCH----HHHHHHHHHhC
Confidence 77899999999999988 89999998875
No 19
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.84 E-value=9.3e-20 Score=123.41 Aligned_cols=99 Identities=27% Similarity=0.536 Sum_probs=87.8
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE-----
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS----- 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~----- 151 (183)
+.++++.++|++.+.. ..+++++|.||++||++|+.+.|.++++++++++++.++.+|++.+++ ++++|+|.
T Consensus 2 v~~l~~~~~~~~~l~~--~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~v~~~Pt~ 78 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTK--ASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECED-IAMEYNISSMPTF 78 (106)
T ss_dssp EEECCSHHHHHHHHHH--HTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHH-HHHHTTCCSSSEE
T ss_pred ceecCCHHHHHHHHHh--cCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccchHH-HHHHcCCCcccEE
Confidence 4578887899999843 278999999999999999999999999999997789999999999987 99999998
Q ss_pred -EeeCCeEEEEEecCcchhhHHHHHHHHHHhhC
Q 030114 152 -IWKDGEMKSEVIGGHKAWLVIEEVREMIKKFV 183 (183)
Q Consensus 152 -~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~l 183 (183)
++++|+.+.++.| .+. ++|.++|+++|
T Consensus 79 ~~~~~G~~~~~~~g-~~~----~~l~~~i~~~l 106 (106)
T 1xwb_A 79 VFLKNGVKVEEFAG-ANA----KRLEDVIKANI 106 (106)
T ss_dssp EEEETTEEEEEEES-CCH----HHHHHHHHHTC
T ss_pred EEEcCCcEEEEEcC-CCH----HHHHHHHHHhC
Confidence 7789999999999 455 78999998765
No 20
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.83 E-value=9.1e-20 Score=129.96 Aligned_cols=101 Identities=22% Similarity=0.423 Sum_probs=88.3
Q ss_pred cceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE---
Q 030114 75 VELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS--- 151 (183)
Q Consensus 75 ~~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~--- 151 (183)
..+..+.+.++|++.+..+...+++++|+||++||++|+.+.|.|+++++++ +++.|+.||++++++ ++++|+|.
T Consensus 24 ~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~v~~~~~~~-~~~~~~v~~~P 101 (139)
T 3d22_A 24 GNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENY-PSLMFLVIDVDELSD-FSASWEIKATP 101 (139)
T ss_dssp TTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTSHH-HHHHTTCCEES
T ss_pred CcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCCEEEEEeCcccHH-HHHHcCCCccc
Confidence 3577888899999999766557899999999999999999999999999998 679999999999988 99999998
Q ss_pred ---EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 ---IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 ---~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
++++|+++.++.|. +. ++|.++|+++
T Consensus 102 t~~~~~~G~~~~~~~G~-~~----~~l~~~l~~~ 130 (139)
T 3d22_A 102 TFFFLRDGQQVDKLVGA-NK----PELHKKITAI 130 (139)
T ss_dssp EEEEEETTEEEEEEESC-CH----HHHHHHHHHH
T ss_pred EEEEEcCCeEEEEEeCC-CH----HHHHHHHHHH
Confidence 67999999999999 66 5666666543
No 21
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.83 E-value=1.4e-19 Score=122.05 Aligned_cols=98 Identities=24% Similarity=0.527 Sum_probs=86.4
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE-----
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS----- 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~----- 151 (183)
+.++++.++|++.+.. ..+++++|.||++||++|+.+.|.++++++.+ +++.|+.+|++++++ ++++|+|.
T Consensus 1 v~~i~~~~~~~~~l~~--~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~-~~~~~~~v~~~~~~~-~~~~~~v~~~Pt~ 76 (104)
T 2vim_A 1 MRVLATAADLEKLINE--NKGRLIVVDFFAQWCGPCRNIAPKVEALAKEI-PEVEFAKVDVDQNEE-AAAKYSVTAMPTF 76 (104)
T ss_dssp CEECCSHHHHHHHHHT--TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTCHH-HHHHTTCCSSSEE
T ss_pred CeecCCHHHHHHHHHh--cCCCeEEEEEECCCCHHHHHhhHHHHHHHHHC-CCCEEEEEeccCCHH-HHHHcCCccccEE
Confidence 3568888999999842 27899999999999999999999999999998 489999999999987 99999998
Q ss_pred -EeeCCeEEEEEecCcchhhHHHHHHHHHHhhC
Q 030114 152 -IWKDGEMKSEVIGGHKAWLVIEEVREMIKKFV 183 (183)
Q Consensus 152 -~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~l 183 (183)
++++|+++.++.|. +. ++|.++|++++
T Consensus 77 ~~~~~g~~~~~~~G~-~~----~~l~~~l~~~l 104 (104)
T 2vim_A 77 VFIKDGKEVDRFSGA-NE----TKLRETITRHK 104 (104)
T ss_dssp EEEETTEEEEEEESS-CH----HHHHHHHHHHC
T ss_pred EEEeCCcEEEEEeCC-CH----HHHHHHHHhhC
Confidence 77899999999995 65 78999988765
No 22
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.83 E-value=7e-20 Score=125.70 Aligned_cols=99 Identities=22% Similarity=0.385 Sum_probs=81.1
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHh-cCCeEEEEEEcCCChHHHHHhcCeE----
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEF-DTKLKFYYVDVNKVSKDLVKRGNIS---- 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~-~~~v~~~~vd~d~~~~~~~~~~~i~---- 151 (183)
+.++++.++|++.+..+ ..+++++|+||++||++|+.+.|.++++++++ .+++.|+.+|++++++ ++++|+|.
T Consensus 2 v~~i~~~~~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~-~~~~~~v~~~Pt 79 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTA-AGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSE-ISELFEISAVPY 79 (112)
T ss_dssp EEEECCHHHHHHHHTTT-TTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHH-HHHHTTCCSSSE
T ss_pred ccccCCHHHHHHHHhcc-cCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHH-HHHHcCCCcccE
Confidence 56788878999998321 23899999999999999999999999999995 2679999999999988 99999998
Q ss_pred --EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 --IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 --~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
++++|+++.++.|..+. +|.++|+++
T Consensus 80 ~~~~~~G~~~~~~~G~~~~-----~l~~~l~~~ 107 (112)
T 3d6i_A 80 FIIIHKGTILKELSGADPK-----EYVSLLEDC 107 (112)
T ss_dssp EEEEETTEEEEEECSCCHH-----HHHHHHHHH
T ss_pred EEEEECCEEEEEecCCCHH-----HHHHHHHHH
Confidence 77899999999998653 466666553
No 23
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.83 E-value=9.4e-20 Score=123.44 Aligned_cols=96 Identities=21% Similarity=0.464 Sum_probs=84.5
Q ss_pred EecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE------
Q 030114 78 EPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS------ 151 (183)
Q Consensus 78 ~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~------ 151 (183)
.+++ .++|++++ ..+++++|.||++||++|+.+.|.++++++++++++.++.+|++++++ ++++|+|.
T Consensus 3 ~~l~-~~~~~~~~----~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~-~~~~~~v~~~Pt~~ 76 (105)
T 1nsw_A 3 MTLT-DANFQQAI----QGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPE-TTSQFGIMSIPTLI 76 (105)
T ss_dssp EEEC-TTTHHHHH----SSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCHH-HHHHTTCCSSSEEE
T ss_pred eecc-HHhHHHHH----hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCHH-HHHHcCCccccEEE
Confidence 3454 46788777 678999999999999999999999999999997789999999999987 99999998
Q ss_pred EeeCCeEEEEEecCcchhhHHHHHHHHHHhhC
Q 030114 152 IWKDGEMKSEVIGGHKAWLVIEEVREMIKKFV 183 (183)
Q Consensus 152 ~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~l 183 (183)
++++|+++.++.|..+. ++|.++|++++
T Consensus 77 ~~~~G~~~~~~~G~~~~----~~l~~~l~~~l 104 (105)
T 1nsw_A 77 LFKGGRPVKQLIGYQPK----EQLEAQLADVL 104 (105)
T ss_dssp EEETTEEEEEEESCCCH----HHHHHHTTTTT
T ss_pred EEeCCeEEEEEecCCCH----HHHHHHHHHHh
Confidence 66899999999999988 78888887754
No 24
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.83 E-value=1.5e-19 Score=125.13 Aligned_cols=97 Identities=30% Similarity=0.632 Sum_probs=86.4
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE-----
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS----- 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~----- 151 (183)
+.++++.++|++.+.. ..+++++|+||++||++|+.+.|.++++++++ ++.++.+|++++++ ++++|+|.
T Consensus 15 v~~l~~~~~~~~~l~~--~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~vd~~~~~~-~~~~~~v~~~Pt~ 89 (117)
T 2xc2_A 15 LIELKQDGDLESLLEQ--HKNKLVVVDFFATWCGPCKTIAPLFKELSEKY--DAIFVKVDVDKLEE-TARKYNISAMPTF 89 (117)
T ss_dssp EEECCSTTHHHHHHHH--TTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS--SSEEEEEETTTSHH-HHHHTTCCSSSEE
T ss_pred eEEeCCHHHHHHHHHh--CCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc--CcEEEEEECCccHH-HHHHcCCCccceE
Confidence 6788887899999853 27899999999999999999999999999888 79999999999988 99999998
Q ss_pred -EeeCCeEEEEEecCcchhhHHHHHHHHHHhhC
Q 030114 152 -IWKDGEMKSEVIGGHKAWLVIEEVREMIKKFV 183 (183)
Q Consensus 152 -~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~l 183 (183)
++++|+++.++.|. +. ++|.++|+++|
T Consensus 90 ~~~~~G~~~~~~~G~-~~----~~l~~~l~~~l 117 (117)
T 2xc2_A 90 IAIKNGEKVGDVVGA-SI----AKVEDMIKKFI 117 (117)
T ss_dssp EEEETTEEEEEEESS-CH----HHHHHHHHHHC
T ss_pred EEEeCCcEEEEEeCC-CH----HHHHHHHHHhC
Confidence 77899999999995 55 78999988775
No 25
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.83 E-value=1.2e-19 Score=124.97 Aligned_cols=96 Identities=24% Similarity=0.436 Sum_probs=85.2
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE-----
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS----- 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~----- 151 (183)
+.+++ .++|++.+ .+++++|+||++||++|+.+.|.++++++++++++.|+.||++++++ ++++|+|.
T Consensus 3 v~~l~-~~~~~~~~-----~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~~~-l~~~~~v~~~Pt~ 75 (112)
T 2voc_A 3 IVKAT-DQSFSAET-----SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQE-TAGKYGVMSIPTL 75 (112)
T ss_dssp CEECC-TTTHHHHH-----SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTCCS-HHHHTTCCSBSEE
T ss_pred eEEec-HHHHHHHh-----CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCCHH-HHHHcCCCcccEE
Confidence 34454 56788887 57999999999999999999999999999997789999999999987 99999998
Q ss_pred -EeeCCeEEEEEecCcchhhHHHHHHHHHHhhC
Q 030114 152 -IWKDGEMKSEVIGGHKAWLVIEEVREMIKKFV 183 (183)
Q Consensus 152 -~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~l 183 (183)
++++|+++.++.|..+. ++|.+++++++
T Consensus 76 ~~~~~G~~~~~~~G~~~~----~~l~~~l~~~~ 104 (112)
T 2voc_A 76 LVLKDGEVVETSVGFKPK----EALQELVNKHL 104 (112)
T ss_dssp EEEETTEEEEEEESCCCH----HHHHHHHHTTS
T ss_pred EEEeCCEEEEEEeCCCCH----HHHHHHHHHHH
Confidence 66999999999999998 88999888753
No 26
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.82 E-value=8.8e-20 Score=133.20 Aligned_cols=96 Identities=20% Similarity=0.432 Sum_probs=85.2
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE-----
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS----- 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~----- 151 (183)
+.+++ .++|++.+ ..+++++|+||++||++|+.+.|.|+++++++.+++.|++||++++++ ++++|+|+
T Consensus 49 ~~~l~-~~~f~~~~----~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~~~~-l~~~~~i~~~Pt~ 122 (155)
T 2ppt_A 49 VAGID-PAILARAE----RDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHPA-VAGRHRIQGIPAF 122 (155)
T ss_dssp EEECC-HHHHHHHT----TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTSTH-HHHHTTCCSSSEE
T ss_pred CccCC-HHHHHHHH----hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCccHH-HHHHcCCCcCCEE
Confidence 44554 67888888 578999999999999999999999999999997789999999999998 99999998
Q ss_pred -EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 -IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 -~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
++++|+++.++.|..+. ++|.++|+++
T Consensus 123 ~~~~~G~~~~~~~G~~~~----~~l~~~l~~~ 150 (155)
T 2ppt_A 123 ILFHKGRELARAAGARPA----SELVGFVRGK 150 (155)
T ss_dssp EEEETTEEEEEEESCCCH----HHHHHHHHHH
T ss_pred EEEeCCeEEEEecCCCCH----HHHHHHHHHH
Confidence 77999999999999888 6777777654
No 27
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.82 E-value=1.5e-19 Score=131.40 Aligned_cols=101 Identities=17% Similarity=0.429 Sum_probs=86.5
Q ss_pred ccceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE--
Q 030114 74 SVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS-- 151 (183)
Q Consensus 74 ~~~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~-- 151 (183)
...+..+++.++|++++..+ .+++++|+||++||++|+.+.|.|+++++++ +++.|+.||++++++ ++++|+|.
T Consensus 11 ~~~v~~l~~~~~~~~~~~~~--~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~-~~v~~~~vd~~~~~~-l~~~~~v~~~ 86 (153)
T 2wz9_A 11 VAAVEEVGSAGQFEELLRLK--AKSLLVVHFWAPWAPQCAQMNEVMAELAKEL-PQVSFVKLEAEGVPE-VSEKYEISSV 86 (153)
T ss_dssp -CCSEEECSHHHHHHHHHHT--TTSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTSHH-HHHHTTCCSS
T ss_pred cCCeEEcCCHHHHHHHHHhc--CCCeEEEEEECCCCHhHHHHHHHHHHHHHHc-CCeEEEEEECCCCHH-HHHHcCCCCC
Confidence 34577888899999998431 3899999999999999999999999999998 689999999999988 99999998
Q ss_pred ----EeeCCeEEEEEecCcchhhHHHHHHHHHHhhC
Q 030114 152 ----IWKDGEMKSEVIGGHKAWLVIEEVREMIKKFV 183 (183)
Q Consensus 152 ----~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~l 183 (183)
++++|+++.++.|.. . ++|.++|++++
T Consensus 87 Pt~~~~~~G~~~~~~~G~~-~----~~l~~~i~~~l 117 (153)
T 2wz9_A 87 PTFLFFKNSQKIDRLDGAH-A----PELTKKVQRHA 117 (153)
T ss_dssp SEEEEEETTEEEEEEESSC-H----HHHHHHHHHHS
T ss_pred CEEEEEECCEEEEEEeCCC-H----HHHHHHHHHHh
Confidence 677999999999974 4 56777777653
No 28
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.82 E-value=1.2e-19 Score=124.33 Aligned_cols=97 Identities=24% Similarity=0.603 Sum_probs=82.6
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE-----
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS----- 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~----- 151 (183)
+..+++ ++|.+.+. +.+++++|+||++||++|+.+.|.++++++++++++.++.+|++.+++ ++++|+|.
T Consensus 7 v~~l~~-~~~~~~~~---~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~v~~~Pt~ 81 (112)
T 1t00_A 7 LKHVTD-DSFEQDVL---KNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPG-TAAKYGVMSIPTL 81 (112)
T ss_dssp CEEECT-TTHHHHTT---TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH-HHHHTTCCSSSEE
T ss_pred EEecch-hhHHHHHh---hCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCHH-HHHhCCCCcccEE
Confidence 445654 55655542 578999999999999999999999999999997789999999999987 99999998
Q ss_pred -EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 -IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 -~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
++++|+++.++.|..+. ++|.++|+++
T Consensus 82 ~~~~~G~~~~~~~G~~~~----~~l~~~l~~~ 109 (112)
T 1t00_A 82 NVYQGGEVAKTIVGAKPK----AAIVRDLEDF 109 (112)
T ss_dssp EEEETTEEEEEEESCCCH----HHHHHHTHHH
T ss_pred EEEeCCEEEEEEeCCCCH----HHHHHHHHHH
Confidence 77999999999999988 6777776654
No 29
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.82 E-value=2.6e-19 Score=123.58 Aligned_cols=100 Identities=24% Similarity=0.528 Sum_probs=87.3
Q ss_pred ceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE----
Q 030114 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS---- 151 (183)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~---- 151 (183)
.+.++.+.++|++.+..+...+++++|.||++||++|+.+.|.++++++++ +++.|+.+|++.+++ ++++|+|.
T Consensus 7 ~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~-~~~~~~~v~~~~~~~-~~~~~~v~~~Pt 84 (118)
T 2vm1_A 7 AVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKF-PGAIFLKVDVDELKD-VAEAYNVEAMPT 84 (118)
T ss_dssp CEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTSHH-HHHHTTCCSBSE
T ss_pred ceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHC-CCcEEEEEEcccCHH-HHHHcCCCcCcE
Confidence 477888999999999766556899999999999999999999999999998 489999999999987 99999998
Q ss_pred --EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 --IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 --~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
++++|+++.++.|. +. ++|.++|+++
T Consensus 85 ~~~~~~g~~~~~~~g~-~~----~~l~~~l~~~ 112 (118)
T 2vm1_A 85 FLFIKDGEKVDSVVGG-RK----DDIHTKIVAL 112 (118)
T ss_dssp EEEEETTEEEEEEESC-CH----HHHHHHHHHH
T ss_pred EEEEeCCeEEEEecCC-CH----HHHHHHHHHH
Confidence 77999999999995 55 5666666554
No 30
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.82 E-value=1.8e-19 Score=122.67 Aligned_cols=97 Identities=23% Similarity=0.524 Sum_probs=84.0
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE-----
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS----- 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~----- 151 (183)
+.+++ .++|++.+. ..+++++|+||++||++|+.+.|.++++++++++++.++.+|++.+++ ++++|+|.
T Consensus 4 v~~l~-~~~f~~~~~---~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~v~~~Pt~ 78 (108)
T 2trx_A 4 IIHLT-DDSFDTDVL---KADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPG-TAPKYGIRGIPTL 78 (108)
T ss_dssp EEECC-TTTHHHHTT---TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCTT-HHHHTTCCSSSEE
T ss_pred ceecc-hhhHHHHHH---hcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCCHH-HHHHcCCcccCEE
Confidence 44554 567776552 578999999999999999999999999999997789999999999987 99999998
Q ss_pred -EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 -IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 -~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
++++|+++.++.|..+. ++|.++|+++
T Consensus 79 ~~~~~G~~~~~~~G~~~~----~~l~~~l~~~ 106 (108)
T 2trx_A 79 LLFKNGEVAATKVGALSK----GQLKEFLDAN 106 (108)
T ss_dssp EEEETTEEEEEEESCCCH----HHHHHHHHHH
T ss_pred EEEeCCEEEEEEecCCCH----HHHHHHHHHh
Confidence 66899999999999888 7788887765
No 31
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.82 E-value=1.5e-19 Score=125.87 Aligned_cols=98 Identities=24% Similarity=0.518 Sum_probs=85.5
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE-----
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS----- 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~----- 151 (183)
.....+.++|.+.+. +.+++++|+||++||++|+.+.|.|+++++++++++.|+.+|++.+++ ++++|+|.
T Consensus 14 ~~~~~~~~~f~~~v~---~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~~-l~~~~~v~~~Pt~ 89 (119)
T 1w4v_A 14 TFNIQDGPDFQDRVV---NSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTD-LAIEYEVSAVPTV 89 (119)
T ss_dssp EEECCSHHHHHHHTT---TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTHH-HHHHTTCCSSSEE
T ss_pred EEEecChhhHHHHHH---cCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCHH-HHHHcCCCcccEE
Confidence 334556788888663 578999999999999999999999999999997789999999999987 99999998
Q ss_pred -EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 -IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 -~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
++++|+++.++.|..+. ++|.++|+++
T Consensus 90 ~~~~~G~~~~~~~G~~~~----~~l~~~l~~~ 117 (119)
T 1w4v_A 90 LAMKNGDVVDKFVGIKDE----DQLEAFLKKL 117 (119)
T ss_dssp EEEETTEEEEEEESCCCH----HHHHHHHHHH
T ss_pred EEEeCCcEEEEEcCCCCH----HHHHHHHHHH
Confidence 66899999999999887 7788888765
No 32
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.82 E-value=1.1e-19 Score=127.05 Aligned_cols=102 Identities=24% Similarity=0.494 Sum_probs=90.6
Q ss_pred CCccceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-eEEEEEEcCCChHHHHHhcCe
Q 030114 72 PTSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTK-LKFYYVDVNKVSKDLVKRGNI 150 (183)
Q Consensus 72 ~~~~~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~-v~~~~vd~d~~~~~~~~~~~i 150 (183)
+....+..|++.++|++++ ..+++++|.||++||++|+.+.|.|+++++.+.++ +.|+.+|++.+++ ++++|+|
T Consensus 12 ~~~~~~~~i~~~~~f~~~l----~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~-~~~~~~v 86 (121)
T 2j23_A 12 VPRGSVQVISSYDQFKQVT----GGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQ-IAQEVGI 86 (121)
T ss_dssp CCCCCEEECCSHHHHHHHH----SSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHH-HHHHHTC
T ss_pred cCCcceEEcCCHHHHHHHH----cCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHH-HHHHcCC
Confidence 3345688899999999999 68999999999999999999999999999988654 9999999999987 9999999
Q ss_pred E------EeeCCeEEEEEecCcchhhHHHHHHHHHHhhC
Q 030114 151 S------IWKDGEMKSEVIGGHKAWLVIEEVREMIKKFV 183 (183)
Q Consensus 151 ~------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~l 183 (183)
. ++++|+++.++.|. +. ++|.++|++++
T Consensus 87 ~~~Pt~~~~~~G~~~~~~~G~-~~----~~l~~~l~~~l 120 (121)
T 2j23_A 87 RAMPTFVFFKNGQKIDTVVGA-DP----SKLQAAITQHS 120 (121)
T ss_dssp CSSSEEEEEETTEEEEEEESS-CH----HHHHHHHHHHT
T ss_pred CcccEEEEEECCeEEeeEcCC-CH----HHHHHHHHHhh
Confidence 8 77899999999999 76 78888888764
No 33
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.82 E-value=2e-19 Score=129.64 Aligned_cols=96 Identities=24% Similarity=0.459 Sum_probs=85.1
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE-----
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS----- 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~----- 151 (183)
+..++ .++|++.+ ..+++++|+||++||++|+.+.|.|+++++++++++.|+.||++++++ ++++|+|.
T Consensus 40 v~~l~-~~~~~~~~----~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~-l~~~~~v~~~Pt~ 113 (148)
T 3p2a_A 40 VINAT-AETLDKLL----QDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEPA-LSTRFRIRSIPTI 113 (148)
T ss_dssp CEECC-TTTHHHHT----TCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH-HHHHTTCCSSSEE
T ss_pred ceecC-HHHHHHHH----hcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECcCCHH-HHHHCCCCccCEE
Confidence 44454 67899888 689999999999999999999999999999998889999999999998 99999999
Q ss_pred -EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 -IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 -~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
++++|+++.++.|..+. ++|.++|+++
T Consensus 114 ~~~~~G~~~~~~~G~~~~----~~l~~~l~~~ 141 (148)
T 3p2a_A 114 MLYRNGKMIDMLNGAVPK----APFDNWLDEQ 141 (148)
T ss_dssp EEEETTEEEEEESSCCCH----HHHHHHHHHH
T ss_pred EEEECCeEEEEEeCCCCH----HHHHHHHHHH
Confidence 78999999999999998 6666666654
No 34
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.82 E-value=2e-19 Score=123.24 Aligned_cols=100 Identities=22% Similarity=0.518 Sum_probs=87.3
Q ss_pred ceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE----
Q 030114 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS---- 151 (183)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~---- 151 (183)
.+.++++.++|++.+..+...+++++|.||++||++|+.+.|.++++++.+ +++.|+.+|+++.++ ++++|+|.
T Consensus 5 ~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~-~~v~~~~v~~~~~~~-~~~~~~v~~~Pt 82 (113)
T 1ti3_A 5 QVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKF-PNVTFLKVDVDELKA-VAEEWNVEAMPT 82 (113)
T ss_dssp CEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHC-SSEEEEEEETTTCHH-HHHHHHCSSTTE
T ss_pred ceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhC-CCcEEEEEEccccHH-HHHhCCCCcccE
Confidence 477888999999999766556899999999999999999999999999998 589999999999987 99999988
Q ss_pred --EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 --IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 --~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
++++|+++.++.|. +. ++|.++|+++
T Consensus 83 ~~~~~~G~~~~~~~g~-~~----~~l~~~l~~~ 110 (113)
T 1ti3_A 83 FIFLKDGKLVDKTVGA-DK----DGLPTLVAKH 110 (113)
T ss_dssp EEEEETTEEEEEEECC-CT----THHHHHHHHH
T ss_pred EEEEeCCEEEEEEecC-CH----HHHHHHHHHh
Confidence 77899999999995 55 5666666654
No 35
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.82 E-value=1.4e-19 Score=125.52 Aligned_cols=101 Identities=23% Similarity=0.466 Sum_probs=85.6
Q ss_pred ccceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE--
Q 030114 74 SVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS-- 151 (183)
Q Consensus 74 ~~~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~-- 151 (183)
...+..+++ ++|.+.+. ..+++++|.||++||++|+.+.|.++++++++++++.|+.||++.+++ ++++|+|.
T Consensus 11 ~~~v~~l~~-~~~~~~~~---~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~i~~~ 85 (121)
T 2i1u_A 11 KSATIKVTD-ASFATDVL---SSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPE-TARNFQVVSI 85 (121)
T ss_dssp -CCSEECCT-TTHHHHTT---TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH-HHHHTTCCSS
T ss_pred cccceecCH-HHHHHHHH---hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCHH-HHHhcCCCcC
Confidence 344666764 55655442 578999999999999999999999999999997789999999999987 99999998
Q ss_pred ----EeeCCeEEEEEecCcchhhHHHHHHHHHHhhC
Q 030114 152 ----IWKDGEMKSEVIGGHKAWLVIEEVREMIKKFV 183 (183)
Q Consensus 152 ----~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~l 183 (183)
++++|+++.++.|..+. ++|.++|++++
T Consensus 86 Pt~~~~~~g~~~~~~~G~~~~----~~l~~~l~~~l 117 (121)
T 2i1u_A 86 PTLILFKDGQPVKRIVGAKGK----AALLRELSDVV 117 (121)
T ss_dssp SEEEEEETTEEEEEEESCCCH----HHHHHHTCSCC
T ss_pred CEEEEEECCEEEEEecCCCCH----HHHHHHHHHHH
Confidence 77899999999999987 78888887653
No 36
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.81 E-value=7e-20 Score=131.93 Aligned_cols=98 Identities=17% Similarity=0.298 Sum_probs=80.5
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE-----
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS----- 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~----- 151 (183)
+..+.+.++|++.+.. ..+++++|+|||+||++|+.+.|.|+++++++++++.|+.||++++++ ++++|+|.
T Consensus 5 l~~i~~~~~~~~~v~~--~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~-~~~~~~i~~~Pt~ 81 (142)
T 1qgv_A 5 LPHLHNGWQVDQAILS--EEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPD-FNKMYELYDPCTV 81 (142)
T ss_dssp SCBCCSHHHHHHHHHT--CSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCT-TTTSSCSCSSCEE
T ss_pred HhccCCHHHHHHHHHh--cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEccccCHH-HHHHcCCCCCCEE
Confidence 4567788999987731 158999999999999999999999999999997789999999999987 99999998
Q ss_pred -EeeCCeEEEE---------EecCcc-hhhHHHHHHHHHHh
Q 030114 152 -IWKDGEMKSE---------VIGGHK-AWLVIEEVREMIKK 181 (183)
Q Consensus 152 -~~~~Gk~v~~---------~~G~~~-~~~~~~~l~~~i~~ 181 (183)
++++|+++.+ +.|..+ . ++|.++|++
T Consensus 82 ~~~~~G~~v~~~~g~~~~~~~~g~~~~~----~~l~~~i~~ 118 (142)
T 1qgv_A 82 MFFFRNKHIMIDLGTGNNNKINWAMEDK----QEMVDIIET 118 (142)
T ss_dssp EEEETTEEEEEECC------CCSCCSCH----HHHHHHHHH
T ss_pred EEEECCcEEEEecCCCCcceeeeecCcH----HHHHHHHHH
Confidence 7899999874 445443 5 555555544
No 37
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.81 E-value=1.8e-19 Score=122.47 Aligned_cols=98 Identities=23% Similarity=0.579 Sum_probs=84.8
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE-----
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS----- 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~----- 151 (183)
+..+ +.++|++.+. ..+++++|+||++||++|+.+.|.++++++++++++.++.+|++.+++ ++++|+|.
T Consensus 3 v~~l-~~~~~~~~~~---~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~v~~~Pt~ 77 (107)
T 1dby_A 3 AGAV-NDDTFKNVVL---ESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPN-VASEYGIRSIPTI 77 (107)
T ss_dssp CEEE-CHHHHHHHTT---TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH-HHHHHTCCSSCEE
T ss_pred cEec-cHHHHHHHHh---cCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCCCHH-HHHHCCCCcCCEE
Confidence 3444 4567877653 468999999999999999999999999999997789999999999987 99999998
Q ss_pred -EeeCCeEEEEEecCcchhhHHHHHHHHHHhhC
Q 030114 152 -IWKDGEMKSEVIGGHKAWLVIEEVREMIKKFV 183 (183)
Q Consensus 152 -~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~l 183 (183)
++++|+++.++.|..+. ++|.++|++++
T Consensus 78 ~~~~~G~~~~~~~G~~~~----~~l~~~l~~~l 106 (107)
T 1dby_A 78 MVFKGGKKCETIIGAVPK----ATIVQTVEKYL 106 (107)
T ss_dssp EEESSSSEEEEEESCCCH----HHHHHHHHHHC
T ss_pred EEEeCCEEEEEEeCCCCH----HHHHHHHHHHh
Confidence 77899999999999988 78888887764
No 38
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.81 E-value=3e-19 Score=122.81 Aligned_cols=94 Identities=26% Similarity=0.645 Sum_probs=84.8
Q ss_pred ecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE------E
Q 030114 79 PINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS------I 152 (183)
Q Consensus 79 ~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~------~ 152 (183)
...+.++|++++ +.+++++|+||++||++|+.+.|.++++++++ +++.|+.||++..++ ++++|+|. +
T Consensus 12 ~~~~~~~f~~~~----~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~-~~v~~~~vd~~~~~~-~~~~~~v~~~Pt~~~ 85 (112)
T 1syr_A 12 IVTSQAEFDSII----SQNELVIVDFFAEWCGPCKRIAPFYEECSKTY-TKMVFIKVDVDEVSE-VTEKENITSMPTFKV 85 (112)
T ss_dssp EECSHHHHHHHH----HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTTHH-HHHHTTCCSSSEEEE
T ss_pred EECCHHHHHHHH----ccCCeEEEEEECCCCHHHHHHHHHHHHHHHHc-CCCEEEEEECCCCHH-HHHHcCCCcccEEEE
Confidence 355788999999 57899999999999999999999999999998 469999999999987 99999998 7
Q ss_pred eeCCeEEEEEecCcchhhHHHHHHHHHHhhC
Q 030114 153 WKDGEMKSEVIGGHKAWLVIEEVREMIKKFV 183 (183)
Q Consensus 153 ~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~l 183 (183)
+++|+++.++.|. +. ++|.++|++++
T Consensus 86 ~~~G~~~~~~~G~-~~----~~l~~~l~~~l 111 (112)
T 1syr_A 86 YKNGSSVDTLLGA-ND----SALKQLIEKYA 111 (112)
T ss_dssp EETTEEEEEEESC-CH----HHHHHHHHTTC
T ss_pred EECCcEEEEEeCC-CH----HHHHHHHHHhh
Confidence 7899999999999 77 88999988764
No 39
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.81 E-value=5.3e-19 Score=119.83 Aligned_cols=98 Identities=19% Similarity=0.432 Sum_probs=85.3
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE-----
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS----- 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~----- 151 (183)
+.+++ .++|++.+. ..+++++|.||++||++|+.+.|.++++++++.+++.|+.+|++.+++ ++++|+|.
T Consensus 4 v~~l~-~~~~~~~~~---~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~v~~~Pt~ 78 (107)
T 2i4a_A 4 TLAVS-DSSFDQDVL---KASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPE-TPNAYQVRSIPTL 78 (107)
T ss_dssp EEECC-TTTHHHHTT---TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCCH-HHHHTTCCSSSEE
T ss_pred eeecc-hhhhhHHHH---hCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCCCHH-HHHhcCCCccCEE
Confidence 44554 566776652 578999999999999999999999999999997789999999999987 99999998
Q ss_pred -EeeCCeEEEEEecCcchhhHHHHHHHHHHhhC
Q 030114 152 -IWKDGEMKSEVIGGHKAWLVIEEVREMIKKFV 183 (183)
Q Consensus 152 -~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~l 183 (183)
++++|+++.++.|..+. ++|.++|++++
T Consensus 79 ~~~~~G~~~~~~~G~~~~----~~l~~~l~~~l 107 (107)
T 2i4a_A 79 MLVRDGKVIDKKVGALPK----SQLKAWVESAQ 107 (107)
T ss_dssp EEEETTEEEEEEESCCCH----HHHHHHHHHTC
T ss_pred EEEeCCEEEEEecCCCCH----HHHHHHHHhcC
Confidence 66999999999999888 88999998764
No 40
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.81 E-value=2.5e-19 Score=128.31 Aligned_cols=97 Identities=12% Similarity=0.275 Sum_probs=82.3
Q ss_pred ceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE----
Q 030114 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS---- 151 (183)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~---- 151 (183)
.+..++ .++|.+.+. ..+++++|+||++||++|+.+.|.|+++++++++++.|+.||++++++ ++++|+|.
T Consensus 7 ~v~~l~-~~~f~~~~~---~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~-l~~~~~v~~~Pt 81 (140)
T 3hz4_A 7 SIIEFE-DMTWSQQVE---DSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIATNPW-TAEKYGVQGTPT 81 (140)
T ss_dssp TEEEEC-HHHHHHHTT---TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCHH-HHHHHTCCEESE
T ss_pred ceEEcc-hHhHHHHHH---hCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCcCHh-HHHHCCCCcCCE
Confidence 355564 667774432 579999999999999999999999999999997789999999999988 99999998
Q ss_pred --EeeCCeEEEEEecCcchhhHHHHHHHHHHh
Q 030114 152 --IWKDGEMKSEVIGGHKAWLVIEEVREMIKK 181 (183)
Q Consensus 152 --~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~ 181 (183)
++++|+++.++.|..+. ++|.++|++
T Consensus 82 ~~~~~~G~~~~~~~G~~~~----~~l~~~l~~ 109 (140)
T 3hz4_A 82 FKFFCHGRPVWEQVGQIYP----SILKNAVRD 109 (140)
T ss_dssp EEEEETTEEEEEEESSCCH----HHHHHHHHH
T ss_pred EEEEeCCcEEEEEcCCCCH----HHHHHHHHH
Confidence 77999999999999988 555555544
No 41
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.81 E-value=5.5e-19 Score=119.89 Aligned_cols=97 Identities=26% Similarity=0.509 Sum_probs=85.0
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE-----
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS----- 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~----- 151 (183)
+.+++ .++|++++ ..+++++|.||++||++|+.+.|.++++++.+++++.++.+|++.+++ ++++|+|.
T Consensus 3 v~~l~-~~~~~~~~----~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~v~~~Pt~ 76 (109)
T 2yzu_A 3 PIEVT-DQNFDETL----GQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDENPK-TAMRYRVMSIPTV 76 (109)
T ss_dssp CEECC-TTTHHHHH----HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHH-HHHHTTCCSSSEE
T ss_pred ceEcc-HhHHHHHh----cCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCCCHh-HHHhCCCCcCCEE
Confidence 34454 56788777 578999999999999999999999999999997789999999999987 99999998
Q ss_pred -EeeCCeEEEEEecCcchhhHHHHHHHHHHhhC
Q 030114 152 -IWKDGEMKSEVIGGHKAWLVIEEVREMIKKFV 183 (183)
Q Consensus 152 -~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~l 183 (183)
++++|+++.++.|..+. ++|.++|++++
T Consensus 77 ~~~~~g~~~~~~~g~~~~----~~l~~~l~~~l 105 (109)
T 2yzu_A 77 ILFKDGQPVEVLVGAQPK----RNYQAKIEKHL 105 (109)
T ss_dssp EEEETTEEEEEEESCCCH----HHHHHHHHTTC
T ss_pred EEEeCCcEeeeEeCCCCH----HHHHHHHHHHh
Confidence 66899999999999887 78888887754
No 42
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.81 E-value=1.4e-19 Score=126.59 Aligned_cols=99 Identities=22% Similarity=0.320 Sum_probs=80.1
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE-----
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS----- 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~----- 151 (183)
+.++ +.++|.+.+..+ ..+++|+|+|||+||+||+.+.|.|++++++| ++++|++||+++. +++|+|+
T Consensus 5 v~~i-t~~~f~~~v~~~-~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~-~~v~f~kvd~d~~----~~~~~v~~~PT~ 77 (118)
T 3evi_A 5 LREI-SGNQYVNEVTNA-EEDVWVIIHLYRSSIPMCLLVNQHLSLLARKF-PETKFVKAIVNSC----IQHYHDNCLPTI 77 (118)
T ss_dssp CEEC-CGGGHHHHTTTC-CTTCEEEEEEECTTSHHHHHHHHHHHHHHHHC-TTSEEEEEEGGGT----STTCCGGGCSEE
T ss_pred eEEe-CHHHHHHHHHhc-CCCCeEEEEEeCCCChHHHHHHHHHHHHHHHC-CCCEEEEEEhHHh----HHHCCCCCCCEE
Confidence 5567 467787776321 12339999999999999999999999999999 6799999999975 4778888
Q ss_pred -EeeCCeEEEEEecCcch---hhHHHHHHHHHHhh
Q 030114 152 -IWKDGEMKSEVIGGHKA---WLVIEEVREMIKKF 182 (183)
Q Consensus 152 -~~~~Gk~v~~~~G~~~~---~~~~~~l~~~i~~~ 182 (183)
+|++|++++++.|..+. ....++|+.+|.++
T Consensus 78 ~~fk~G~~v~~~~G~~~~gg~~~~~~~le~~L~~~ 112 (118)
T 3evi_A 78 FVYKNGQIEAKFIGIIECGGINLKLEELEWKLAEV 112 (118)
T ss_dssp EEEETTEEEEEEESTTTTTCSSCCHHHHHHHHHTT
T ss_pred EEEECCEEEEEEeChhhhCCCCCCHHHHHHHHHHc
Confidence 99999999999998742 34558888888753
No 43
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.81 E-value=6.1e-19 Score=119.15 Aligned_cols=94 Identities=26% Similarity=0.634 Sum_probs=83.5
Q ss_pred CchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE------EeeC
Q 030114 82 DSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS------IWKD 155 (183)
Q Consensus 82 ~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~------~~~~ 155 (183)
+.++|++.+. ..+++++|.||++||++|+.+.|.++++++.+++++.++.+|++.+++ ++++|+|. ++++
T Consensus 6 ~~~~~~~~~~---~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~v~~~Pt~~~~~~ 81 (105)
T 1fb6_A 6 NDSSWKEFVL---ESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPG-IATQYNIRSIPTVLFFKN 81 (105)
T ss_dssp CTTTHHHHTT---TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH-HHHHTTCCSSSEEEEEET
T ss_pred hhhhHHHHHh---cCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcchHH-HHHhCCCCcccEEEEEeC
Confidence 3567777653 468999999999999999999999999999997789999999999987 99999998 7789
Q ss_pred CeEEEEEecCcchhhHHHHHHHHHHhhC
Q 030114 156 GEMKSEVIGGHKAWLVIEEVREMIKKFV 183 (183)
Q Consensus 156 Gk~v~~~~G~~~~~~~~~~l~~~i~~~l 183 (183)
|+++.++.|..+. +++.++|+++|
T Consensus 82 g~~~~~~~G~~~~----~~l~~~l~~~l 105 (105)
T 1fb6_A 82 GERKESIIGAVPK----STLTDSIEKYL 105 (105)
T ss_dssp TEEEEEEEECCCH----HHHHHHHHHHC
T ss_pred CeEEEEEecCCCH----HHHHHHHHhhC
Confidence 9999999999988 88888888765
No 44
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.80 E-value=2e-19 Score=127.05 Aligned_cols=97 Identities=22% Similarity=0.486 Sum_probs=84.3
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE-----
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS----- 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~----- 151 (183)
+..++ .++|++.+. +.+++++|+||++||++|+.+.|.++++++++++++.|+.||++++++ ++++|+|.
T Consensus 24 v~~l~-~~~f~~~~~---~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~~~-l~~~~~v~~~Pt~ 98 (128)
T 2o8v_B 24 IIHLT-DDSFDTDVL---KADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPG-TAPKYGIRGIPTL 98 (128)
T ss_dssp SEEEC-TTTHHHHTT---TCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTCCT-TSGGGTCCSSSEE
T ss_pred cEecC-hhhHHHHHH---hcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHH-HHHHcCCCccCEE
Confidence 45564 567876542 578999999999999999999999999999997789999999999987 99999998
Q ss_pred -EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 -IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 -~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
++++|+++.++.|..+. ++|.++|+++
T Consensus 99 ~~~~~G~~~~~~~G~~~~----~~l~~~l~~~ 126 (128)
T 2o8v_B 99 LLFKNGEVAATKVGALSK----GQLKEFLDAN 126 (128)
T ss_dssp EEEETTEEEEEEESCCCH----HHHHHHHHHH
T ss_pred EEEeCCEEEEEEcCCCCH----HHHHHHHHHh
Confidence 66899999999999888 7788887765
No 45
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.80 E-value=4.6e-19 Score=140.71 Aligned_cols=99 Identities=20% Similarity=0.450 Sum_probs=85.9
Q ss_pred ceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE----
Q 030114 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS---- 151 (183)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~---- 151 (183)
.+.+++ .++|++++.. +.+++|+|+|||+||+||+.+.|.|+++++++++++.|++||++++++ ++++|+|.
T Consensus 8 ~v~~~~-~~~f~~~~~~--~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~-~~~~~~v~~~Pt 83 (287)
T 3qou_A 8 NIVNIN-ESNLQQVLEQ--SMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQM-IAAQFGLRAIPT 83 (287)
T ss_dssp TEEECC-TTTHHHHHTT--TTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTCHH-HHHTTTCCSSSE
T ss_pred ccEECC-HHHHHHHHHh--cCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCccCHH-HHHHcCCCCCCe
Confidence 355665 5789998731 248999999999999999999999999999998789999999999998 99999999
Q ss_pred --EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 --IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 --~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
++++|+++.++.|..+. +.+.++++.+
T Consensus 84 ~~~~~~G~~~~~~~g~~~~----~~l~~~l~~~ 112 (287)
T 3qou_A 84 VYLFQNGQPVDGFQGPQPE----EAIRALLDXV 112 (287)
T ss_dssp EEEEETTEEEEEEESCCCH----HHHHHHHHHH
T ss_pred EEEEECCEEEEEeeCCCCH----HHHHHHHHHH
Confidence 77999999999999988 6777777654
No 46
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.80 E-value=6.2e-19 Score=120.26 Aligned_cols=96 Identities=19% Similarity=0.409 Sum_probs=84.9
Q ss_pred ceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhc---CCeEEEEEEcCCChHHHHHhcCeE-
Q 030114 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFD---TKLKFYYVDVNKVSKDLVKRGNIS- 151 (183)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~---~~v~~~~vd~d~~~~~~~~~~~i~- 151 (183)
.+..+ +.++|++.+ . +++++|+||++||++|+.+.|.++++++.+. +++.++.+|++++++ ++++|+|.
T Consensus 6 ~v~~l-~~~~~~~~~----~-~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~-l~~~~~v~~ 78 (111)
T 3uvt_A 6 TVLAL-TENNFDDTI----A-EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERN-ICSKYSVRG 78 (111)
T ss_dssp CSEEC-CTTTHHHHH----H-SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHH-HHHHTTCCS
T ss_pred cceEc-ChhhHHHHh----c-CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHh-HHHhcCCCc
Confidence 34555 577899998 4 7899999999999999999999999999874 469999999999988 99999999
Q ss_pred -----EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 -----IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 -----~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
++++|+.+.++.|..+. ++|.++|+++
T Consensus 79 ~Pt~~~~~~g~~~~~~~g~~~~----~~l~~~l~~~ 110 (111)
T 3uvt_A 79 YPTLLLFRGGKKVSEHSGGRDL----DSLHRFVLSQ 110 (111)
T ss_dssp SSEEEEEETTEEEEEECSCCSH----HHHHHHHHHH
T ss_pred ccEEEEEeCCcEEEeccCCcCH----HHHHHHHHhc
Confidence 77999999999999888 8899988765
No 47
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.80 E-value=1.8e-19 Score=123.88 Aligned_cols=94 Identities=16% Similarity=0.271 Sum_probs=82.6
Q ss_pred EecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE------
Q 030114 78 EPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS------ 151 (183)
Q Consensus 78 ~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~------ 151 (183)
..+.+.++| +.+ ..+++++|+||++||++|+.+.|.++++++.+ +++.|+.+|++..++ ++++|+|.
T Consensus 5 ~~~~~~~~f-~~~----~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~-~~v~~~~vd~~~~~~-l~~~~~v~~~Pt~~ 77 (110)
T 2l6c_A 5 RDITTEAGM-AHF----EGLSDAIVFFHKNLCPHCKNMEKVLDKFGARA-PQVAISSVDSEARPE-LMKELGFERVPTLV 77 (110)
T ss_dssp SBCGGGCSH-HHH----TTCSEEEEEEECSSCSTHHHHHHHHHHHHTTC-TTSCEEEEEGGGCHH-HHHHTTCCSSCEEE
T ss_pred eecCCHHHH-HHH----HcCCCEEEEEECCCCHhHHHHHHHHHHHHHHC-CCcEEEEEcCcCCHH-HHHHcCCcccCEEE
Confidence 345567788 666 57899999999999999999999999999988 589999999999987 99999998
Q ss_pred EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 ~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
++++|+++.++.|..+. ++|.++|+++
T Consensus 78 ~~~~G~~v~~~~G~~~~----~~l~~~~~~~ 104 (110)
T 2l6c_A 78 FIRDGKVAKVFSGIMNP----RELQALYASI 104 (110)
T ss_dssp EEESSSEEEEEESCCCH----HHHHHHHHTC
T ss_pred EEECCEEEEEEcCCCCH----HHHHHHHHHH
Confidence 66899999999999888 7888888764
No 48
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.80 E-value=4.1e-19 Score=126.45 Aligned_cols=96 Identities=21% Similarity=0.478 Sum_probs=83.6
Q ss_pred ceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCC---eEEEEEEcCCChHHHHHhcCeE-
Q 030114 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTK---LKFYYVDVNKVSKDLVKRGNIS- 151 (183)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~---v~~~~vd~d~~~~~~~~~~~i~- 151 (183)
.+..+ +.++|++.+ ..+++++|+||++||++|+.+.|.|+++++.+++. +.|+.||++++.+ ++++|+|.
T Consensus 18 ~v~~l-~~~~~~~~~----~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~-~~~~~~v~~ 91 (140)
T 2dj1_A 18 GVWVL-NDGNFDNFV----ADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASM-LASKFDVSG 91 (140)
T ss_dssp TEEEC-CTTTHHHHH----TTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHH-HHHHTTCCS
T ss_pred CCEEc-ChHhHHHHH----hcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHH-HHHHCCCCc
Confidence 46666 577899888 67899999999999999999999999999998654 9999999999987 99999998
Q ss_pred -----EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 -----IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 -----~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
++++|+ +.++.|..+. ++|.++|+++
T Consensus 92 ~Pt~~~~~~G~-~~~~~g~~~~----~~l~~~l~~~ 122 (140)
T 2dj1_A 92 YPTIKILKKGQ-AVDYDGSRTQ----EEIVAKVREV 122 (140)
T ss_dssp SSEEEEEETTE-EEECCSCCCH----HHHHHHHHHH
T ss_pred cCeEEEEECCc-EEEcCCCCCH----HHHHHHHHHh
Confidence 678999 7789999888 7777777654
No 49
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.79 E-value=8.5e-19 Score=117.82 Aligned_cols=91 Identities=30% Similarity=0.592 Sum_probs=80.9
Q ss_pred CchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE------EeeC
Q 030114 82 DSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS------IWKD 155 (183)
Q Consensus 82 ~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~------~~~~ 155 (183)
+.++|++.+ ..+++++|.||++||++|+.+.|.++++++.+++ +.++.+|++.+++ ++++|+|. ++++
T Consensus 5 ~~~~~~~~~----~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~-~~~~~~v~~~Pt~~~~~~ 78 (104)
T 2e0q_A 5 DSKNFDSFL----ASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ-VGFGKLNSDENPD-IAARYGVMSLPTVIFFKD 78 (104)
T ss_dssp CTTTHHHHH----HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHH-HHHHTTCCSSCEEEEEET
T ss_pred CHHHHHHHH----hcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC-ceEEEEECCCCHH-HHHhCCccccCEEEEEEC
Confidence 456898888 5789999999999999999999999999999955 9999999999987 99999998 6789
Q ss_pred CeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 156 GEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 156 Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
|+.+.++.|..+. ++|.++|+++
T Consensus 79 g~~~~~~~g~~~~----~~l~~~l~~~ 101 (104)
T 2e0q_A 79 GEPVDEIIGAVPR----EEIEIRIKNL 101 (104)
T ss_dssp TEEEEEEESCCCH----HHHHHHHHHH
T ss_pred CeEhhhccCCCCH----HHHHHHHHHH
Confidence 9999999999887 6777777654
No 50
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.79 E-value=1.3e-18 Score=119.22 Aligned_cols=97 Identities=28% Similarity=0.480 Sum_probs=82.0
Q ss_pred ceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcC-CChHHHHHhcCeE---
Q 030114 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN-KVSKDLVKRGNIS--- 151 (183)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d-~~~~~~~~~~~i~--- 151 (183)
.+..++ .++|.+.+.. ..+++++|+||++||++|+.+.|.++++++++ +++.|+.+|++ ..++ ++++|+|.
T Consensus 6 ~v~~l~-~~~~~~~~~~--~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~-~~v~~~~vd~~~~~~~-~~~~~~v~~~P 80 (111)
T 2pu9_C 6 KVTEVN-KDTFWPIVKA--AGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEY-LDVIFLKLDCNQENKT-LAKELGIRVVP 80 (111)
T ss_dssp SEEEEC-TTTHHHHHTT--CTTSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEECSSTTHH-HHHHHCCSBSS
T ss_pred ccEEec-hHHHHHHHHh--cCCCEEEEEEECCcCHhHHHHCHHHHHHHHHC-CCeEEEEEecCcchHH-HHHHcCCCeee
Confidence 456676 4678888832 15899999999999999999999999999998 46999999998 5665 99999998
Q ss_pred ---EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 ---IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 ---~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
++++|+++.++.|.. . ++|.++|+++
T Consensus 81 t~~~~~~G~~~~~~~G~~-~----~~l~~~l~~~ 109 (111)
T 2pu9_C 81 TFKILKENSVVGEVTGAK-Y----DKLLEAIQAA 109 (111)
T ss_dssp EEEEESSSSEEEEEESSC-H----HHHHHHHHHH
T ss_pred EEEEEeCCcEEEEEcCCC-H----HHHHHHHHHh
Confidence 788999999999985 5 7788888765
No 51
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.79 E-value=9.7e-19 Score=120.01 Aligned_cols=97 Identities=19% Similarity=0.419 Sum_probs=84.2
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE-----
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS----- 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~----- 151 (183)
+.++ +.++|++.+. ..+++++|.||++||++|+.+.|.++++++.+++++.|+.+|++.+++ ++++|+|.
T Consensus 9 v~~l-~~~~~~~~~~---~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~-~~~~~~v~~~Pt~ 83 (115)
T 1thx_A 9 VITI-TDAEFESEVL---KAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPT-TVKKYKVEGVPAL 83 (115)
T ss_dssp EEEC-CGGGHHHHTT---TCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCHH-HHHHTTCCSSSEE
T ss_pred eEEe-eccchhhHhh---cCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCHH-HHHHcCCCceeEE
Confidence 5566 4677877652 578999999999999999999999999999997789999999999987 99999998
Q ss_pred -EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 -IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 -~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
++++|+++.++.|..+. ++|.++|+++
T Consensus 84 ~~~~~G~~~~~~~g~~~~----~~l~~~l~~~ 111 (115)
T 1thx_A 84 RLVKGEQILDSTEGVISK----DKLLSFLDTH 111 (115)
T ss_dssp EEEETTEEEEEEESCCCH----HHHHHHHHHH
T ss_pred EEEcCCEEEEEecCCCCH----HHHHHHHHHH
Confidence 66999999999999888 6777777654
No 52
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.79 E-value=4.1e-19 Score=125.12 Aligned_cols=83 Identities=19% Similarity=0.398 Sum_probs=77.3
Q ss_pred hCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE------EeeCCeEEEEEecCcch
Q 030114 95 ELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS------IWKDGEMKSEVIGGHKA 168 (183)
Q Consensus 95 ~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~------~~~~Gk~v~~~~G~~~~ 168 (183)
..+++++|+|||+||++|+.+.|.++++++++++++.++.||++++++ ++++|+|. ++++|+++.++.|..+.
T Consensus 40 ~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~~~-l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~ 118 (128)
T 3ul3_B 40 MKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNES-LARKFSVKSLPTIILLKNKTMLARKDHFVSS 118 (128)
T ss_dssp SCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGCHH-HHHHTTCCSSSEEEEEETTEEEEEESSCCCH
T ss_pred ccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHH-HHHHcCCCCcCEEEEEECCEEEEEecCCCCH
Confidence 579999999999999999999999999999997789999999999998 99999999 67999999999999998
Q ss_pred hhHHHHHHHHHHhh
Q 030114 169 WLVIEEVREMIKKF 182 (183)
Q Consensus 169 ~~~~~~l~~~i~~~ 182 (183)
++|.++|+++
T Consensus 119 ----~~l~~~l~~~ 128 (128)
T 3ul3_B 119 ----NDLIALIKKH 128 (128)
T ss_dssp ----HHHHHHHTTC
T ss_pred ----HHHHHHHHhC
Confidence 8899988764
No 53
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.79 E-value=6.8e-19 Score=135.42 Aligned_cols=97 Identities=23% Similarity=0.522 Sum_probs=84.9
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE-----
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS----- 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~----- 151 (183)
...+ +.++|++.+. +.+++++|+|||+||++|+.+.|.|+++++++++++.|+.||++.+++ ++++|+|.
T Consensus 14 ~~~l-t~~~f~~~v~---~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~-l~~~~~v~~~Pt~ 88 (222)
T 3dxb_A 14 IIHL-TDDSFDTDVL---KADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPG-TAPKYGIRGIPTL 88 (222)
T ss_dssp CEEC-CTTTHHHHHT---TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCTT-TGGGGTCCSBSEE
T ss_pred ceeC-CHHHHHHHHH---hcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCHH-HHHHcCCCcCCEE
Confidence 4444 5678887542 678999999999999999999999999999997789999999999988 99999999
Q ss_pred -EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 -IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 -~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
++++|+++.++.|..+. ++|.++|+++
T Consensus 89 ~~~~~G~~~~~~~G~~~~----~~l~~~l~~~ 116 (222)
T 3dxb_A 89 LLFKNGEVAATKVGALSK----GQLKEFLDAN 116 (222)
T ss_dssp EEEETTEEEEEEESCCCH----HHHHHHHHHH
T ss_pred EEEECCeEEEEeccccCh----HHHHHHHHhh
Confidence 78999999999999988 7777777765
No 54
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.79 E-value=1.2e-18 Score=121.29 Aligned_cols=96 Identities=24% Similarity=0.405 Sum_probs=83.6
Q ss_pred eEecC-CchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE----
Q 030114 77 LEPIN-DSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS---- 151 (183)
Q Consensus 77 ~~~i~-~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~---- 151 (183)
+..++ +.++|.+.+. +.+++++|+||++||++|+.+.|.|+++++++ +++.|+.||++++++ ++++|+|.
T Consensus 5 v~~~~g~~~~~~~~~~---~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~vd~~~~~~-~~~~~~i~~~Pt 79 (118)
T 2f51_A 5 IVHFNGTHEALLNRIK---EAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-KDVTFIKVDVDKNGN-AADAYGVSSIPA 79 (118)
T ss_dssp SEEECSCHHHHHHHHH---HCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTCHH-HHHHTTCCSSSE
T ss_pred ceEecCCHHHHHHHHH---hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCeEEEEEECCCCHH-HHHhcCCCCCCE
Confidence 45565 7788886553 46899999999999999999999999999999 889999999999988 99999998
Q ss_pred --EeeC----CeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 --IWKD----GEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 --~~~~----Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
++++ |+++.++.|..+ ++|+++++++
T Consensus 80 ~~~~~~~~~~G~~~~~~~G~~~-----~~l~~~~~~~ 111 (118)
T 2f51_A 80 LFFVKKEGNEIKTLDQFVGADV-----SRIKADIEKF 111 (118)
T ss_dssp EEEEEEETTEEEEEEEEESCCH-----HHHHHHHHHH
T ss_pred EEEEeCCCCcceEEEeecCCCH-----HHHHHHHHHh
Confidence 6777 999999999988 4688887765
No 55
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.79 E-value=1e-18 Score=123.16 Aligned_cols=98 Identities=23% Similarity=0.455 Sum_probs=82.5
Q ss_pred ceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhc----CCeEEEEEEcCCChHHHHHhcCeE
Q 030114 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFD----TKLKFYYVDVNKVSKDLVKRGNIS 151 (183)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~----~~v~~~~vd~d~~~~~~~~~~~i~ 151 (183)
.+..++ .++|++.+. ..+++++|+||++||++|+.+.|.|+++++.++ +++.|+.||++.+++ ++++|+|.
T Consensus 8 ~v~~l~-~~~~~~~~~---~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~-l~~~~~v~ 82 (133)
T 1x5d_A 8 DVIELT-DDSFDKNVL---DSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQV-LASRYGIR 82 (133)
T ss_dssp SCEECC-TTHHHHHTT---TSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCH-HHHHHTCC
T ss_pred cCEEcC-HhhHHHHHh---cCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHH-HHHhCCCC
Confidence 355565 567877653 468999999999999999999999999999987 689999999999987 99999998
Q ss_pred ------EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 ------IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 ------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
++.+|+.+.++.|..+. ++|.++|+++
T Consensus 83 ~~Pt~~~~~~g~~~~~~~G~~~~----~~l~~~l~~~ 115 (133)
T 1x5d_A 83 GFPTIKIFQKGESPVDYDGGRTR----SDIVSRALDL 115 (133)
T ss_dssp SSSEEEEEETTEEEEEECSCCSH----HHHHHHHHHH
T ss_pred eeCeEEEEeCCCceEEecCCCCH----HHHHHHHHHH
Confidence 77889999999999888 5566655543
No 56
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.79 E-value=8.8e-19 Score=123.15 Aligned_cols=98 Identities=12% Similarity=0.233 Sum_probs=82.6
Q ss_pred ceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhc-----CCeEEEEEEcCCChHHHHHhcCe
Q 030114 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFD-----TKLKFYYVDVNKVSKDLVKRGNI 150 (183)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~-----~~v~~~~vd~d~~~~~~~~~~~i 150 (183)
.+.++ +.++|++.+. +.+++++|+|||+||++|+.+.|.|+++++.+. +++.|+.||++++++ ++++|+|
T Consensus 16 ~v~~l-~~~~f~~~~~---~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~-l~~~~~v 90 (127)
T 3h79_A 16 RVVEL-TDETFDSIVM---DPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPD-VIERMRV 90 (127)
T ss_dssp CCEEC-CTTTHHHHHT---CTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHH-HHHHTTC
T ss_pred ceEEC-ChhhHHHHHh---CCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHh-HHHhcCC
Confidence 45566 4668888873 358999999999999999999999999998753 569999999999988 9999999
Q ss_pred E------EeeCCeEE--EEEecCcchhhHHHHHHHHHHhh
Q 030114 151 S------IWKDGEMK--SEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 151 ~------~~~~Gk~v--~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
. +|++|+.+ .++.|..+. +.|.+||+++
T Consensus 91 ~~~Pt~~~~~~g~~~~~~~~~G~~~~----~~l~~~i~~~ 126 (127)
T 3h79_A 91 SGFPTMRYYTRIDKQEPFEYSGQRYL----SLVDSFVFQN 126 (127)
T ss_dssp CSSSEEEEECSSCSSSCEECCSCCCH----HHHHHHHHHH
T ss_pred ccCCEEEEEeCCCCCCceEecCCccH----HHHHHHHHhc
Confidence 9 77777654 578899888 8999998864
No 57
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.79 E-value=7e-19 Score=125.07 Aligned_cols=99 Identities=19% Similarity=0.410 Sum_probs=83.6
Q ss_pred cceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE---
Q 030114 75 VELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS--- 151 (183)
Q Consensus 75 ~~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~--- 151 (183)
..+.++++.++|.+++.. ..+++++|+|||+||++|+.+.|.|+++++++ ++.|+.||+++.++ ++++|+|.
T Consensus 20 ~~v~~l~~~~~~~~~l~~--~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~v~~~~vd~~~~~~-l~~~~~v~~~P 94 (133)
T 3cxg_A 20 SIYIELKNTGSLNQVFSS--TQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY--YVTLVDIDVDIHPK-LNDQHNIKALP 94 (133)
T ss_dssp EEEEECCCTTHHHHHHTC---CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE--ECEEEEEETTTCHH-HHHHTTCCSSS
T ss_pred ccEEEecChhHHHHHHHh--cCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc--CEEEEEEeccchHH-HHHhcCCCCCC
Confidence 357788888999998842 24689999999999999999999999998877 59999999999987 99999998
Q ss_pred ---Eee--CCe--EEEEEecCcchhhHHHHHHHHHHhhC
Q 030114 152 ---IWK--DGE--MKSEVIGGHKAWLVIEEVREMIKKFV 183 (183)
Q Consensus 152 ---~~~--~Gk--~v~~~~G~~~~~~~~~~l~~~i~~~l 183 (183)
+++ +|+ ++.++.|. +. ++|.++|++++
T Consensus 95 t~~~~~~~~g~g~~~~~~~G~-~~----~~l~~~l~~~l 128 (133)
T 3cxg_A 95 TFEFYFNLNNEWVLVHTVEGA-NQ----NDIEKAFQKYC 128 (133)
T ss_dssp EEEEEEEETTEEEEEEEEESC-CH----HHHHHHHHHHS
T ss_pred EEEEEEecCCCeEEEEEEcCC-CH----HHHHHHHHHHH
Confidence 555 898 88999998 55 67887777653
No 58
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.79 E-value=1.3e-18 Score=124.11 Aligned_cols=101 Identities=24% Similarity=0.454 Sum_probs=83.2
Q ss_pred ceEecCCchhHHHHHHHhhh--------CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHh
Q 030114 76 ELEPINDSDHLDQILLRAQE--------LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKR 147 (183)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~--------~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~ 147 (183)
.+..+ +.++|...+..... .+++++|+||++||++|+.+.|.|+++++++++++.|+.||++.+++ ++++
T Consensus 23 ~v~~l-~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~ 100 (141)
T 3hxs_A 23 GTIHL-TRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPE-LARD 100 (141)
T ss_dssp CCEEC-CHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH-HHHH
T ss_pred Ccccc-cHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCCCHH-HHHH
Confidence 45556 46778887731100 47999999999999999999999999999998789999999999998 9999
Q ss_pred cCeE------Ee-eCCeEEEEEecCcchhhHHHHHHHHHHhhC
Q 030114 148 GNIS------IW-KDGEMKSEVIGGHKAWLVIEEVREMIKKFV 183 (183)
Q Consensus 148 ~~i~------~~-~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~l 183 (183)
|+|. ++ ++|+++ ++.|..+. ++|.++|++++
T Consensus 101 ~~v~~~Pt~~~~~~~g~~~-~~~G~~~~----~~l~~~l~~~l 138 (141)
T 3hxs_A 101 FGIQSIPTIWFVPMKGEPQ-VNMGALSK----EQLKGYIDKVL 138 (141)
T ss_dssp TTCCSSSEEEEECSSSCCE-EEESCCCH----HHHHHHHHHTT
T ss_pred cCCCCcCEEEEEeCCCCEE-EEeCCCCH----HHHHHHHHHHH
Confidence 9998 44 677776 89999888 78888887654
No 59
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.78 E-value=6.6e-19 Score=124.56 Aligned_cols=98 Identities=18% Similarity=0.351 Sum_probs=84.3
Q ss_pred cCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHH--HHHHHhcCCeEEEEEEc---CCChHHHHHhcCe---E
Q 030114 80 INDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLE--KLAAEFDTKLKFYYVDV---NKVSKDLVKRGNI---S 151 (183)
Q Consensus 80 i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~--~la~~~~~~v~~~~vd~---d~~~~~~~~~~~i---~ 151 (183)
+.+.+++++.+..+...+++++|+||++||++|+.+.|.|+ ++++.+++++.++.||+ +..++ ++++|+| .
T Consensus 12 ~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~-l~~~~~v~~~~ 90 (133)
T 3fk8_A 12 ADAWTQVKKALAAGKRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLE-LSQAYGDPIQD 90 (133)
T ss_dssp CCHHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHH-HHHHTTCGGGG
T ss_pred cChHhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHH-HHHHhCCccCC
Confidence 34567788888777678999999999999999999999999 99999877899999999 77777 9999999 6
Q ss_pred ------Ee-eCCeEEEEEec-------CcchhhHHHHHHHHHHhh
Q 030114 152 ------IW-KDGEMKSEVIG-------GHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 ------~~-~~Gk~v~~~~G-------~~~~~~~~~~l~~~i~~~ 182 (183)
++ ++|+++.++.| ..+. +++.++|+++
T Consensus 91 ~~Pt~~~~d~~G~~~~~~~g~~~~~~~~~~~----~~l~~~l~~l 131 (133)
T 3fk8_A 91 GIPAVVVVNSDGKVRYTTKGGELANARKMSD----QGIYDFFAKI 131 (133)
T ss_dssp CSSEEEEECTTSCEEEECCSCTTTTGGGSCH----HHHHHHHHHH
T ss_pred ccceEEEECCCCCEEEEecCCcccccccCCH----HHHHHHHHHh
Confidence 44 89999999999 5555 7888888764
No 60
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.78 E-value=3.5e-18 Score=119.28 Aligned_cols=97 Identities=29% Similarity=0.519 Sum_probs=82.3
Q ss_pred ceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcC-CChHHHHHhcCeE---
Q 030114 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN-KVSKDLVKRGNIS--- 151 (183)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d-~~~~~~~~~~~i~--- 151 (183)
.+..++ .++|.+.+.. ..+++++|+||++||++|+.+.|.++++++++ +++.++.+|++ ++++ ++++|+|+
T Consensus 19 ~v~~l~-~~~~~~~~~~--~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~-~~~~~~~vd~~~~~~~-~~~~~~v~~~P 93 (124)
T 1faa_A 19 KVTEVN-KDTFWPIVKA--AGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEY-LDVIFLKLDCNQENKT-LAKELGIRVVP 93 (124)
T ss_dssp SEEEEC-TTTHHHHHHH--TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEECSSTTHH-HHHHHCCSSSS
T ss_pred ceEEec-chhHHHHHHh--cCCCEEEEEEECCcCHhHHHHhHHHHHHHHHC-CCCEEEEEecCcchHH-HHHHcCCCeee
Confidence 355665 5678888743 26899999999999999999999999999998 46999999998 4565 99999998
Q ss_pred ---EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 ---IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 ---~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
++++|+++.++.|.. . ++|.++|+++
T Consensus 94 t~~~~~~G~~~~~~~G~~-~----~~l~~~i~~~ 122 (124)
T 1faa_A 94 TFKILKENSVVGEVTGAK-Y----DKLLEAIQAA 122 (124)
T ss_dssp EEEEEETTEEEEEEESSC-H----HHHHHHHHHH
T ss_pred EEEEEeCCcEEEEEcCCC-H----HHHHHHHHHh
Confidence 789999999999986 5 7888888765
No 61
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.78 E-value=3.3e-18 Score=121.74 Aligned_cols=100 Identities=23% Similarity=0.461 Sum_probs=82.7
Q ss_pred ceEecCCchhHHHHHHHhh--------hCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHh
Q 030114 76 ELEPINDSDHLDQILLRAQ--------ELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKR 147 (183)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~--------~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~ 147 (183)
.+..++ .++|.+.+..+. ..+++++|+||++||++|+.+.|.|+++++++++++.|+.||++++++ ++++
T Consensus 10 ~v~~l~-~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~-l~~~ 87 (136)
T 2l5l_A 10 KVIHLT-KAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQE-LAGA 87 (136)
T ss_dssp SEEEEC-HHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH-HHHH
T ss_pred ceEEec-chHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCCHH-HHHH
Confidence 455564 678888773110 146899999999999999999999999999997789999999999987 9999
Q ss_pred cCeE------Ee-eCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 148 GNIS------IW-KDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 148 ~~i~------~~-~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
|+|. ++ ++|+++ ++.|..+. ++|.++|+++
T Consensus 88 ~~v~~~Pt~~~~~~~G~~~-~~~G~~~~----~~l~~~l~~~ 124 (136)
T 2l5l_A 88 FGIRSIPSILFIPMEGKPE-MAQGAMPK----ASFKKAIDEF 124 (136)
T ss_dssp TTCCSSCEEEEECSSSCCE-EEESCCCH----HHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCCcEE-EEeCCCCH----HHHHHHHHHH
Confidence 9998 55 899987 78999888 7777777764
No 62
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.77 E-value=3.2e-18 Score=119.91 Aligned_cols=94 Identities=24% Similarity=0.386 Sum_probs=80.3
Q ss_pred ceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcC-CeEEEEEEcCCChHHHHHhcCeE---
Q 030114 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNKVSKDLVKRGNIS--- 151 (183)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~d~~~~~~~~~~~i~--- 151 (183)
.+.++ +.++|++++ . ++++|+|||+||++|+.+.|.|+++++++.+ ++.|+.||++++++ ++++|+|.
T Consensus 8 ~v~~l-~~~~f~~~~-----~-~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~-~~~~~~v~~~P 79 (126)
T 1x5e_A 8 NVRVI-TDENWRELL-----E-GDWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPG-LSGRFIINALP 79 (126)
T ss_dssp SEEEC-CTTTHHHHT-----S-SEEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHH-HHHHTTCCSSS
T ss_pred ccEEe-cHHHHHHHh-----C-CCEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHH-HHHHcCCcccC
Confidence 45666 467898876 2 2499999999999999999999999999865 79999999999988 99999998
Q ss_pred ---EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 ---IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 ---~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
++++|+ +.++.|..+. ++|.++|+++
T Consensus 80 t~~~~~~G~-~~~~~G~~~~----~~l~~~l~~~ 108 (126)
T 1x5e_A 80 TIYHCKDGE-FRRYQGPRTK----KDFINFISDK 108 (126)
T ss_dssp EEEEEETTE-EEECCSCCCH----HHHHHHHHTC
T ss_pred EEEEEeCCe-EEEeecCCCH----HHHHHHHHHH
Confidence 678998 5789999887 7888888764
No 63
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.77 E-value=9.5e-19 Score=124.76 Aligned_cols=101 Identities=23% Similarity=0.297 Sum_probs=82.2
Q ss_pred cceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE---
Q 030114 75 VELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS--- 151 (183)
Q Consensus 75 ~~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~--- 151 (183)
..+.++ +.++|.+.+..+ ..+++++|+|||+||++|+.+.|.|++++++| +++.|+.||+++.+ ++|+|.
T Consensus 10 g~v~~i-~~~~~~~~v~~~-~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~-~~v~~~~vd~~~~~----~~~~i~~~P 82 (135)
T 2dbc_A 10 GELREI-SGNQYVNEVTNA-EKDLWVVIHLYRSSVPMCLVVNQHLSVLARKF-PETKFVKAIVNSCI----EHYHDNCLP 82 (135)
T ss_dssp CSCEEC-CHHHHHHHTTTC-CSSCEEEEEECCTTCHHHHHHHHHHHHHHHHC-SSEEEEEECCSSSC----SSCCSSCCS
T ss_pred CceEEc-CHHHHHHHHHhc-CCCCEEEEEEECCCChHHHHHHHHHHHHHHHC-CCcEEEEEEhhcCc----ccCCCCCCC
Confidence 457778 788999988432 23479999999999999999999999999999 67999999999875 578887
Q ss_pred ---EeeCCeEEEEEecCcch---hhHHHHHHHHHHhh
Q 030114 152 ---IWKDGEMKSEVIGGHKA---WLVIEEVREMIKKF 182 (183)
Q Consensus 152 ---~~~~Gk~v~~~~G~~~~---~~~~~~l~~~i~~~ 182 (183)
+|++|+++.++.|..+. ....++|+++|+++
T Consensus 83 t~~~~~~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 83 TIFVYKNGQIEGKFIGIIECGGINLKLEELEWKLSEV 119 (135)
T ss_dssp EEEEESSSSCSEEEESTTTTTCTTCCHHHHHHHHHHH
T ss_pred EEEEEECCEEEEEEEeEEeeCCCcCCHHHHHHHHHHc
Confidence 88999999999998621 11337888888764
No 64
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.77 E-value=1.1e-18 Score=124.25 Aligned_cols=93 Identities=15% Similarity=0.259 Sum_probs=79.6
Q ss_pred ceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEc---------CCChHHHHH
Q 030114 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDV---------NKVSKDLVK 146 (183)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~---------d~~~~~~~~ 146 (183)
.+.++ +.++|++.+ .. +++|+|||+||++|+.+.|.|++++++++ +.|+.||+ ++.++ +++
T Consensus 17 ~v~~l-~~~~~~~~~----~~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~--v~~~~vd~~~~~~~~~~d~~~~-l~~ 86 (135)
T 3emx_A 17 RLIYI-TPEEFRQLL----QG--DAILAVYSKTCPHCHRDWPQLIQASKEVD--VPIVMFIWGSLIGERELSAARL-EMN 86 (135)
T ss_dssp EEEEC-CHHHHHHHH----TS--SEEEEEEETTCHHHHHHHHHHHHHHTTCC--SCEEEEEECTTCCHHHHHHHHH-HHH
T ss_pred ceeec-CHHHHHHHh----CC--cEEEEEECCcCHhhhHhChhHHHHHHHCC--CEEEEEECCCchhhhhhhhhHH-HHH
Confidence 35556 578899988 34 99999999999999999999999999984 99999999 66666 899
Q ss_pred hcCeE------EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 147 RGNIS------IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 147 ~~~i~------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
+|+|. ++++|+++.++.|..+. +.+.++++++
T Consensus 87 ~~~v~~~Pt~~~~~~G~~v~~~~G~~~~----~~~~~~i~~~ 124 (135)
T 3emx_A 87 KAGVEGTPTLVFYKEGRIVDKLVGATPW----SLKVEKAREI 124 (135)
T ss_dssp HHTCCSSSEEEEEETTEEEEEEESCCCH----HHHHHHHHHH
T ss_pred HcCCceeCeEEEEcCCEEEEEEeCCCCH----HHHHHHHHHH
Confidence 99998 88999999999999998 6666666554
No 65
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.76 E-value=4.6e-18 Score=121.37 Aligned_cols=96 Identities=22% Similarity=0.453 Sum_probs=73.0
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE-----
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS----- 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~----- 151 (183)
+.+++ .++|...+. ..++ ++|+||++||++|+.+.|.|+++++++.+++.|+.||++.+++ ++++|+|.
T Consensus 35 v~~l~-~~~~~~~~~---~~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~-l~~~~~v~~~Pt~ 108 (140)
T 1v98_A 35 VVEAD-EKGFAQEVA---GAPL-TLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDEHPG-LAARYGVRSVPTL 108 (140)
T ss_dssp ------------------CCCE-EEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHH-HHHHTTCCSSSEE
T ss_pred cccCC-HHHHHHHHH---cCCC-EEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCCCHH-HHHHCCCCccCEE
Confidence 44454 567877773 3344 9999999999999999999999999997789999999999987 99999998
Q ss_pred -EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 -IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 -~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
++++|+++.++.|..+. ++|.++|+++
T Consensus 109 ~~~~~G~~~~~~~G~~~~----~~l~~~i~~~ 136 (140)
T 1v98_A 109 VLFRRGAPVATWVGASPR----RVLEERLRPY 136 (140)
T ss_dssp EEEETTEEEEEEESCCCH----HHHHHHHHHH
T ss_pred EEEeCCcEEEEEeCCCCH----HHHHHHHHHH
Confidence 77999999999999987 6777777654
No 66
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.76 E-value=2.1e-18 Score=118.69 Aligned_cols=94 Identities=16% Similarity=0.238 Sum_probs=81.0
Q ss_pred ceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChH---HHHHhcCeE-
Q 030114 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSK---DLVKRGNIS- 151 (183)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~---~~~~~~~i~- 151 (183)
.+.+|++.++|++++ +.++|++|+|+|+|||+|+.+.|.|++++++ +++.|++||++++.+ .++++++|+
T Consensus 7 ~~~~i~s~e~f~~ii----~~~~~vvi~khatwCgpc~~~~~~~e~~~~~--~~v~~~~vdVde~r~~Sn~IA~~~~V~h 80 (112)
T 3iv4_A 7 VAIKLSSIDQFEQVI----EENKYVFVLKHSETCPISANAYDQFNKFLYE--RDMDGYYLIVQQERDLSDYIAKKTNVKH 80 (112)
T ss_dssp CEEECCSHHHHHHHH----HHCSEEEEEEECTTCHHHHHHHHHHHHHHHH--HTCCEEEEEGGGGHHHHHHHHHHHTCCC
T ss_pred ceeecCCHHHHHHHH----hcCCCEEEEEECCcCHhHHHHHHHHHHHhcc--CCceEEEEEeecCchhhHHHHHHhCCcc
Confidence 478899999999999 4699999999999999999999999999985 679999999999854 389999999
Q ss_pred ------EeeCCeEEEE-EecCcchhhHHHHHHHHH
Q 030114 152 ------IWKDGEMKSE-VIGGHKAWLVIEEVREMI 179 (183)
Q Consensus 152 ------~~~~Gk~v~~-~~G~~~~~~~~~~l~~~i 179 (183)
+++||+.+.+ -.+..+. +.|.+.+
T Consensus 81 ~sPq~il~k~G~~v~~~SH~~I~~----~~l~~~~ 111 (112)
T 3iv4_A 81 ESPQAFYFVNGEMVWNRDHGDINV----SSLAQAE 111 (112)
T ss_dssp CSSEEEEEETTEEEEEEEGGGCSH----HHHHHHT
T ss_pred CCCeEEEEECCEEEEEeeccccCH----HHHHHhh
Confidence 8899999877 4466666 6666654
No 67
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.76 E-value=1.1e-18 Score=121.51 Aligned_cols=97 Identities=18% Similarity=0.347 Sum_probs=78.0
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE-----
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS----- 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~----- 151 (183)
+..++ .++|.+.+. ..+++++|+||++||++|+.+.|.++++++.+.+++.|+.||++++++ ++++|+|.
T Consensus 5 v~~l~-~~~f~~~~~---~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~-~~~~~~v~~~Pt~ 79 (122)
T 3aps_A 5 SIDLT-PQTFNEKVL---QGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQ-TCQKAGIKAYPSV 79 (122)
T ss_dssp SEECC-HHHHHHHTT---TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHH-HHHHTTCCSSSEE
T ss_pred hhcCC-HHHHHHHHh---cCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCHH-HHHHcCCCccceE
Confidence 44554 567754432 578999999999999999999999999999997789999999999988 99999999
Q ss_pred -EeeCCeEEEEEecC----cchhhHHHHHHHHHHhh
Q 030114 152 -IWKDGEMKSEVIGG----HKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 -~~~~Gk~v~~~~G~----~~~~~~~~~l~~~i~~~ 182 (183)
++.+|+.+.++.|. .+. ++|.++|+++
T Consensus 80 ~~~~~~~~~~~~~g~~~~~~~~----~~l~~~l~~~ 111 (122)
T 3aps_A 80 KLYQYERAKKSIWEEQINSRDA----KTIAALIYGK 111 (122)
T ss_dssp EEEEEEGGGTEEEEEEECCSCH----HHHHHHHHHH
T ss_pred EEEeCCCccceeeccccCcCCH----HHHHHHHHHH
Confidence 66666667778876 566 5666665543
No 68
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.76 E-value=9e-19 Score=122.96 Aligned_cols=98 Identities=22% Similarity=0.525 Sum_probs=79.3
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCCCh--------------hhhhhhHHHHHHHHHhcCCeEEEEEEcCCChH
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCR--------------KCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSK 142 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~--------------~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~ 142 (183)
+.+++ .++|++.+. +.+++++|+|||+||+ +|+.+.|.++++++++++++.++.+|++++++
T Consensus 5 v~~l~-~~~f~~~~~---~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~~~ 80 (123)
T 1oaz_A 5 IIHLT-DDSFDTDVL---KADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPG 80 (123)
T ss_dssp CEECC-STTHHHHTT---SCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTSCTT
T ss_pred cEecC-hhhHHHHHH---hCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCCCHH
Confidence 44554 567875542 5789999999999999 99999999999999997789999999999987
Q ss_pred HHHHhcCeE------EeeCCeEEEEEecCcchhhHHHHHHHHHHhhC
Q 030114 143 DLVKRGNIS------IWKDGEMKSEVIGGHKAWLVIEEVREMIKKFV 183 (183)
Q Consensus 143 ~~~~~~~i~------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~l 183 (183)
++++|+|+ ++++|+++.++.|..+. ++|.++|++++
T Consensus 81 -l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~----~~l~~~l~~~l 122 (123)
T 1oaz_A 81 -TAPKYGIRGIPTLLLFKNGEVAATKVGALSK----GQLKEFLDANL 122 (123)
T ss_dssp -TGGGGTCCBSSEEEEEESSSEEEEEESCCCH----HHHHHHHTTTC
T ss_pred -HHHHcCCCccCEEEEEECCEEEEEEeCCCCH----HHHHHHHHHHh
Confidence 99999998 67999999999999887 88999988764
No 69
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.76 E-value=3.1e-18 Score=120.39 Aligned_cols=97 Identities=18% Similarity=0.379 Sum_probs=79.9
Q ss_pred ceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE----
Q 030114 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS---- 151 (183)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~---- 151 (183)
.+.+++ .++|++.+. ..+++++|+||++||++|+.+.|.++++++++++.+.|+.||++++++ ++++|+|.
T Consensus 18 ~v~~l~-~~~f~~~~~---~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~-l~~~~~v~~~Pt 92 (130)
T 2dml_A 18 DVIELT-PSNFNREVI---QSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQS-LGGQYGVQGFPT 92 (130)
T ss_dssp SSEECC-TTTHHHHTT---TCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTTCHH-HHHHHTCCSSSE
T ss_pred CcEECC-HHHHHHHHh---cCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCCCHH-HHHHcCCCccCE
Confidence 355565 567887553 578999999999999999999999999999997779999999999988 99999998
Q ss_pred --EeeCCeE-EEEEecCcchhhHHHHHHHHHHh
Q 030114 152 --IWKDGEM-KSEVIGGHKAWLVIEEVREMIKK 181 (183)
Q Consensus 152 --~~~~Gk~-v~~~~G~~~~~~~~~~l~~~i~~ 181 (183)
++.+|+. +.++.|..+. ++|.++|.+
T Consensus 93 ~~~~~~~~~~~~~~~G~~~~----~~l~~~l~~ 121 (130)
T 2dml_A 93 IKIFGANKNKPEDYQGGRTG----EAIVDAALS 121 (130)
T ss_dssp EEEESSCTTSCEECCSCCSH----HHHHHHHHH
T ss_pred EEEEeCCCCeEEEeecCCCH----HHHHHHHHH
Confidence 5666554 8899999888 555555544
No 70
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.75 E-value=4.2e-18 Score=129.80 Aligned_cols=97 Identities=16% Similarity=0.329 Sum_probs=84.7
Q ss_pred ceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE----
Q 030114 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS---- 151 (183)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~---- 151 (183)
.+..+ +.++|+..+ ..+++++|+|||+||++|+.+.|.|+++++++++++.|+.||++++++ ++++|+|.
T Consensus 98 ~v~~l-~~~~f~~~~----~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~~~~-l~~~~~v~~~Pt 171 (210)
T 3apq_A 98 EIITL-ERREFDAAV----NSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDRM-LCRMKGVNSYPS 171 (210)
T ss_dssp TSEEC-CHHHHHHHH----HHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHH-HHHHTTCCSSSE
T ss_pred ceEEe-cHHHHHHHH----ccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECCccHH-HHHHcCCCcCCe
Confidence 34455 477888888 578999999999999999999999999999998789999999999987 99999999
Q ss_pred --EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 --IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 --~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
++++|+++.++.|..+. ++|.++|+++
T Consensus 172 ~~~~~~G~~~~~~~G~~~~----~~l~~~i~~~ 200 (210)
T 3apq_A 172 LFIFRSGMAAVKYNGDRSK----ESLVAFAMQH 200 (210)
T ss_dssp EEEECTTSCCEECCSCCCH----HHHHHHHHHH
T ss_pred EEEEECCCceeEecCCCCH----HHHHHHHHHh
Confidence 77999999999999888 6666666654
No 71
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.75 E-value=1.6e-18 Score=120.25 Aligned_cols=90 Identities=14% Similarity=0.209 Sum_probs=74.3
Q ss_pred CchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCCh-----HHHHHhcCeE-----
Q 030114 82 DSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVS-----KDLVKRGNIS----- 151 (183)
Q Consensus 82 ~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~-----~~~~~~~~i~----- 151 (183)
+.++|.+.+ ..+++++|+|||+||++|+.+.|.+++++++++.++. .+|++... ..++++|+|.
T Consensus 18 ~~~~~~~~~----~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~v~--~~~~~~~~~~~~~~~~~~~~~i~~~Pt~ 91 (118)
T 1zma_A 18 TVVRAQEAL----DKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIY--FINSEEPSQLNDLQAFRSRYGIPTVPGF 91 (118)
T ss_dssp CHHHHHHHH----HTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCCCCE--EEETTCGGGHHHHHHHHHHHTCCSSCEE
T ss_pred CHHHHHHHH----hCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCCeEE--EEECCCcCcHHHHHHHHHHcCCCCCCeE
Confidence 577888888 5789999999999999999999999999999864544 45555432 2488999998
Q ss_pred -EeeCCeEEEEEecCcchhhHHHHHHHHHHh
Q 030114 152 -IWKDGEMKSEVIGGHKAWLVIEEVREMIKK 181 (183)
Q Consensus 152 -~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~ 181 (183)
++++|+++.++.|..+. ++|.++|++
T Consensus 92 ~~~~~G~~~~~~~G~~~~----~~l~~~l~k 118 (118)
T 1zma_A 92 VHITDGQINVRCDSSMSA----QEIKDFAGL 118 (118)
T ss_dssp EEEETTEEEEECCTTCCH----HHHHHHHTC
T ss_pred EEEECCEEEEEecCCCCH----HHHHHHhhC
Confidence 77999999999999888 888888763
No 72
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=8.2e-19 Score=124.94 Aligned_cols=88 Identities=19% Similarity=0.405 Sum_probs=76.4
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcC-CeEEEEEEcCCChHHHHHhcCe-----
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNKVSKDLVKRGNI----- 150 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~d~~~~~~~~~~~i----- 150 (183)
+..++ .++|++.+.. ..+++++|+|||+||++|+.+.|.|+++++++++ ++.|+.||++++++ ++++|+|
T Consensus 9 v~~l~-~~~f~~~~~~--~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~-~~~~~~v~~~~~ 84 (137)
T 2dj0_A 9 IKYFN-DKTIDEELER--DKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTD-VSTRYKVSTSPL 84 (137)
T ss_dssp CEECC-TTHHHHHHHH--STTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHH-HHHHTTCCCCSS
T ss_pred EEEcc-HhhHHHHHhc--CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHH-HHHHccCcccCC
Confidence 55564 6788888843 3456999999999999999999999999999975 79999999999988 9999998
Q ss_pred --E-----EeeCCeEEEEEecCcch
Q 030114 151 --S-----IWKDGEMKSEVIGGHKA 168 (183)
Q Consensus 151 --~-----~~~~Gk~v~~~~G~~~~ 168 (183)
. ++++|+++.++.|..+.
T Consensus 85 ~~~~Pt~~~~~~G~~~~~~~G~~~~ 109 (137)
T 2dj0_A 85 TKQLPTLILFQGGKEAMRRPQIDKK 109 (137)
T ss_dssp SSCSSEEEEESSSSEEEEESCBCSS
T ss_pred cCCCCEEEEEECCEEEEEecCcCch
Confidence 3 77999999999998876
No 73
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.75 E-value=8.5e-18 Score=117.72 Aligned_cols=84 Identities=15% Similarity=0.301 Sum_probs=75.1
Q ss_pred hCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEE--cCCChHHHHHhcCeE------Eee-CCeEEEEEecC
Q 030114 95 ELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVD--VNKVSKDLVKRGNIS------IWK-DGEMKSEVIGG 165 (183)
Q Consensus 95 ~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd--~d~~~~~~~~~~~i~------~~~-~Gk~v~~~~G~ 165 (183)
..+++++|+||++||++|+.+.|.++++++++++++.|+.|| ++.+++ ++++|+|. ++. +|+++.++.|.
T Consensus 24 ~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~~~~-~~~~~~v~~~Pt~~~~~~~G~~~~~~~G~ 102 (126)
T 2l57_A 24 KEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNID-LAYKYDANIVPTTVFLDKEGNKFYVHQGL 102 (126)
T ss_dssp CSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSHHHH-HHHHTTCCSSSEEEEECTTCCEEEEEESC
T ss_pred hCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCchHH-HHHHcCCcceeEEEEECCCCCEEEEecCC
Confidence 578999999999999999999999999999998789999999 887776 99999998 555 89999999999
Q ss_pred cchhhHHHHHHHHHHhhC
Q 030114 166 HKAWLVIEEVREMIKKFV 183 (183)
Q Consensus 166 ~~~~~~~~~l~~~i~~~l 183 (183)
.+. ++|.++|++++
T Consensus 103 ~~~----~~l~~~l~~~~ 116 (126)
T 2l57_A 103 MRK----NNIETILNSLG 116 (126)
T ss_dssp CCH----HHHHHHHHHHC
T ss_pred CCH----HHHHHHHHHHh
Confidence 888 78888887653
No 74
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.74 E-value=1.1e-18 Score=125.85 Aligned_cols=95 Identities=15% Similarity=0.254 Sum_probs=67.9
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCC--ChhhhhhhHHHHHHHHHhcCCeE--EEEEEcCCChHHHHHhcCeE-
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASW--CRKCIYLKPKLEKLAAEFDTKLK--FYYVDVNKVSKDLVKRGNIS- 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~w--C~~C~~~~p~l~~la~~~~~~v~--~~~vd~d~~~~~~~~~~~i~- 151 (183)
+..++ .++|++.+ ..++.++|+|+++| |++|+.+.|.|++++++| +++. |++||+|++++ ++++|+|+
T Consensus 19 ~~~l~-~~~f~~~i----~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~v~~~~~~Vd~d~~~~-la~~~~V~~ 91 (142)
T 2es7_A 19 WQPVE-ASTVDDWI----KRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQFDWQVAVADLEQSEA-IGDRFNVRR 91 (142)
T ss_dssp CEECC-CC------------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-TTSCCEEEEECHHHHHH-HHHTTTCCS
T ss_pred Ccccc-cccHHHHH----HhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cccceeEEEEECCCCHH-HHHhcCCCc
Confidence 45565 47899988 46677999999987 999999999999999999 8888 99999999987 99999999
Q ss_pred -----EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 -----IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 -----~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
+|++|+++.++.|..+. ++|.++|+++
T Consensus 92 iPT~~~fk~G~~v~~~~G~~~~----~~l~~~i~~~ 123 (142)
T 2es7_A 92 FPATLVFTDGKLRGALSGIHPW----AELLTLMRSI 123 (142)
T ss_dssp SSEEEEESCC----CEESCCCH----HHHHHHHHHH
T ss_pred CCeEEEEeCCEEEEEEeCCCCH----HHHHHHHHHH
Confidence 78999999999999888 6677666654
No 75
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.74 E-value=2.2e-18 Score=118.82 Aligned_cols=97 Identities=21% Similarity=0.495 Sum_probs=83.9
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhc---CCeEEEEEEcCCChHHHHHhcCeE--
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFD---TKLKFYYVDVNKVSKDLVKRGNIS-- 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~---~~v~~~~vd~d~~~~~~~~~~~i~-- 151 (183)
+..+ +.++|++.+ ..+++++|.||++||++|+.+.|.++++++.++ .++.++.+|++++++ ++++|+|.
T Consensus 9 v~~l-~~~~~~~~~----~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~-~~~~~~v~~~ 82 (120)
T 1mek_A 9 VLVL-RKSNFAEAL----AAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESD-LAQQYGVRGY 82 (120)
T ss_dssp EEEC-CTTTHHHHH----HHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCS-SHHHHTCCSS
T ss_pred cEEe-chhhHHHHH----ccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHH-HHHHCCCCcc
Confidence 4555 467888888 578999999999999999999999999999985 369999999999887 89999998
Q ss_pred ----EeeCCeEE--EEEecCcchhhHHHHHHHHHHhhC
Q 030114 152 ----IWKDGEMK--SEVIGGHKAWLVIEEVREMIKKFV 183 (183)
Q Consensus 152 ----~~~~Gk~v--~~~~G~~~~~~~~~~l~~~i~~~l 183 (183)
++++|+.+ .++.|..+. ++|.++|++++
T Consensus 83 Pt~~~~~~g~~~~~~~~~g~~~~----~~l~~~l~~~~ 116 (120)
T 1mek_A 83 PTIKFFRNGDTASPKEYTAGREA----DDIVNWLKKRT 116 (120)
T ss_dssp SEEEEEESSCSSSCEECCCCSSH----HHHHHHHHTTS
T ss_pred cEEEEEeCCCcCCcccccCccCH----HHHHHHHHhcc
Confidence 77899987 889998887 88888888753
No 76
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.74 E-value=5.7e-19 Score=123.97 Aligned_cols=100 Identities=26% Similarity=0.579 Sum_probs=86.4
Q ss_pred ceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE----
Q 030114 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS---- 151 (183)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~---- 151 (183)
.+.++++.++|++.+..+...+++++|+||++||++|+.+.|.|+++++.+ +++.|+.||++++++ ++++|+|.
T Consensus 15 ~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~-~~v~~~~v~~~~~~~-~~~~~~v~~~Pt 92 (130)
T 1wmj_A 15 VVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKF-PGAVFLKVDVDELKE-VAEKYNVEAMPT 92 (130)
T ss_dssp SSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHC-TTBCCEECCTTTSGG-GHHHHTCCSSCC
T ss_pred ceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHC-CCCEEEEEeccchHH-HHHHcCCCccce
Confidence 466788889999999766557899999999999999999999999999998 479999999999987 99999998
Q ss_pred --EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 --IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 --~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
++++|+++.++.|. +. ++|.++|+++
T Consensus 93 ~~~~~~g~~~~~~~g~-~~----~~l~~~l~~~ 120 (130)
T 1wmj_A 93 FLFIKDGAEADKVVGA-RK----DDLQNTIVKH 120 (130)
T ss_dssp CCBCTTTTCCBCCCTT-CT----TTHHHHHHHH
T ss_pred EEEEeCCeEEEEEeCC-CH----HHHHHHHHHH
Confidence 77899999999995 55 5666666654
No 77
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.73 E-value=1e-17 Score=119.00 Aligned_cols=99 Identities=21% Similarity=0.408 Sum_probs=82.9
Q ss_pred ceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHH---HHHHHHhcCCeEEEEEEcCCC---hHHHHHhcC
Q 030114 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKL---EKLAAEFDTKLKFYYVDVNKV---SKDLVKRGN 149 (183)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l---~~la~~~~~~v~~~~vd~d~~---~~~~~~~~~ 149 (183)
.+..+.+.+++...+... .+++++|+||++||++|+.+.|.+ .++++.++ ++.++.||++.. ...++++|+
T Consensus 12 ~f~~~~~~~~~~~~l~~~--~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~-~~~~~~vd~~~~~~~~~~l~~~~~ 88 (134)
T 2fwh_A 12 NFTQIKTVDELNQALVEA--KGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA-DTVLLQANVTANDAQDVALLKHLN 88 (134)
T ss_dssp CCEECCSHHHHHHHHHHH--TTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT-TSEEEEEECTTCCHHHHHHHHHTT
T ss_pred CcEEecCHHHHHHHHHHh--cCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc-CcEEEEEeCCCCcchHHHHHHHcC
Confidence 356688889999888643 489999999999999999999999 99999984 699999999653 124899999
Q ss_pred eE------Ee-eCCeEE--EEEecCcchhhHHHHHHHHHHh
Q 030114 150 IS------IW-KDGEMK--SEVIGGHKAWLVIEEVREMIKK 181 (183)
Q Consensus 150 i~------~~-~~Gk~v--~~~~G~~~~~~~~~~l~~~i~~ 181 (183)
|. ++ ++|+++ .++.|..+. ++|.++|++
T Consensus 89 v~~~Pt~~~~d~~G~~v~~~~~~G~~~~----~~l~~~l~~ 125 (134)
T 2fwh_A 89 VLGLPTILFFDGQGQEHPQARVTGFMDA----ETFSAHLRD 125 (134)
T ss_dssp CCSSSEEEEECTTSCBCGGGCBCSCCCH----HHHHHHHHH
T ss_pred CCCCCEEEEECCCCCEeeeeeeeeccCH----HHHHHHHHh
Confidence 98 55 899998 789999998 788888765
No 78
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.73 E-value=1.9e-17 Score=136.89 Aligned_cols=96 Identities=24% Similarity=0.529 Sum_probs=82.0
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHh------cCCeEEEEEEcCCChHHHHHhcCe
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEF------DTKLKFYYVDVNKVSKDLVKRGNI 150 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~------~~~v~~~~vd~d~~~~~~~~~~~i 150 (183)
+..++ .++|++++ ..+++|+|+||||||++|+.+.|.|+++++.+ .+++.|++||++.+.+ ++++|+|
T Consensus 7 v~~l~-~~~f~~~~----~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~-l~~~~~v 80 (382)
T 2r2j_A 7 ITSLD-TENIDEIL----NNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSD-IAQRYRI 80 (382)
T ss_dssp -CBCC-TTTHHHHH----HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHH-HHHHTTC
T ss_pred eEECC-HHHHHHHH----hcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHH-HHHhcCC
Confidence 44554 67899888 56899999999999999999999999999998 3459999999999987 9999999
Q ss_pred E------EeeCCeEEE-EEecCcchhhHHHHHHHHHHhh
Q 030114 151 S------IWKDGEMKS-EVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 151 ~------~~~~Gk~v~-~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
+ +|++|+.+. .+.|..+. +.|.++|+++
T Consensus 81 ~~~Pt~~~f~~G~~~~~~~~G~~~~----~~l~~~i~~~ 115 (382)
T 2r2j_A 81 SKYPTLKLFRNGMMMKREYRGQRSV----KALADYIRQQ 115 (382)
T ss_dssp CEESEEEEEETTEEEEEECCSCCSH----HHHHHHHHHH
T ss_pred CcCCEEEEEeCCcEeeeeecCcchH----HHHHHHHHHh
Confidence 9 889999887 48899888 7777777654
No 79
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.72 E-value=1.3e-17 Score=117.24 Aligned_cols=96 Identities=21% Similarity=0.357 Sum_probs=79.3
Q ss_pred chhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHH---HHHHHHhcCCeEEEEEEcCC-ChHHHHHhcCeE------E
Q 030114 83 SDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKL---EKLAAEFDTKLKFYYVDVNK-VSKDLVKRGNIS------I 152 (183)
Q Consensus 83 ~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l---~~la~~~~~~v~~~~vd~d~-~~~~~~~~~~i~------~ 152 (183)
..+|++.+..++..+++++|+||++||++|+.+.|.+ +++.+.++.++.++.+|++. ....++++|+|. +
T Consensus 13 ~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~ 92 (130)
T 2kuc_A 13 ELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGVHAYPTLLF 92 (130)
T ss_dssp CCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTTHHHHHHHTTCCSSCEEEE
T ss_pred cCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcchHHHHHHcCCCCCCEEEE
Confidence 4568787766656789999999999999999999999 77877776679999999985 233499999998 4
Q ss_pred e-eCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 153 W-KDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 153 ~-~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
+ ++|+++.++.|..+. ++|.++|+++
T Consensus 93 ~d~~G~~~~~~~G~~~~----~~l~~~l~~~ 119 (130)
T 2kuc_A 93 INSSGEVVYRLVGAEDA----PELLKKVKLG 119 (130)
T ss_dssp ECTTSCEEEEEESCCCH----HHHHHHHHHH
T ss_pred ECCCCcEEEEecCCCCH----HHHHHHHHHH
Confidence 4 799999999999988 6777777654
No 80
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.72 E-value=7.4e-17 Score=129.48 Aligned_cols=99 Identities=14% Similarity=0.334 Sum_probs=83.6
Q ss_pred cceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcC--CChHHHHHhcCeE-
Q 030114 75 VELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN--KVSKDLVKRGNIS- 151 (183)
Q Consensus 75 ~~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d--~~~~~~~~~~~i~- 151 (183)
..+.+++ .++|++.+. +.+++++|+|||+||++|+.+.|.|+++++++++.+.++.||+| +.++ ++++|+|.
T Consensus 17 ~~vv~lt-~~~f~~~i~---~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~-l~~~~~I~~ 91 (298)
T 3ed3_A 17 PHISELT-PKSFDKAIH---NTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKA-LCAKYDVNG 91 (298)
T ss_dssp TTCEECC-HHHHHHHHT---SSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHH-HHHHTTCCB
T ss_pred CCeEEeC-HHHHHHHHH---hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHH-HHHhCCCCc
Confidence 3456664 778999883 46889999999999999999999999999999778999999998 4555 99999999
Q ss_pred -----EeeCCe-----------------EEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 -----IWKDGE-----------------MKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 -----~~~~Gk-----------------~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
+|++|+ ...++.|..+. +.|.+|+.+.
T Consensus 92 ~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~----~~i~~fl~~~ 140 (298)
T 3ed3_A 92 FPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTL----APIVDFSLSR 140 (298)
T ss_dssp SSEEEEEECCCC-------------CCCEEEECCSCCSH----HHHHHHHHTT
T ss_pred cceEEEEECCceeecccccccccccccccceeecCCcCH----HHHHHHHHHh
Confidence 788887 46778888887 8888888765
No 81
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.72 E-value=4.2e-17 Score=125.72 Aligned_cols=96 Identities=24% Similarity=0.488 Sum_probs=82.5
Q ss_pred ceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCC---eEEEEEEcCCChHHHHHhcCeE-
Q 030114 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTK---LKFYYVDVNKVSKDLVKRGNIS- 151 (183)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~---v~~~~vd~d~~~~~~~~~~~i~- 151 (183)
.+..++ .++|++.+ .++++++|+|||+||++|+.+.|.|+++++++++. +.++.||++++++ ++++|+|+
T Consensus 16 ~v~~l~-~~~~~~~~----~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~-l~~~~~v~~ 89 (241)
T 3idv_A 16 GVLVLN-DANFDNFV----ADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASV-LASRFDVSG 89 (241)
T ss_dssp TEEEEC-TTTHHHHH----TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHH-HHHHTTCCS
T ss_pred CcEEec-ccCHHHHH----hcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHH-HHHhcCCCc
Confidence 355554 66899988 68899999999999999999999999999998654 9999999999988 99999999
Q ss_pred -----EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 -----IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 -----~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
++++|+.+ ++.|..+. ++|.++++++
T Consensus 90 ~Pt~~~~~~g~~~-~~~g~~~~----~~l~~~i~~~ 120 (241)
T 3idv_A 90 YPTIKILKKGQAV-DYEGSRTQ----EEIVAKVREV 120 (241)
T ss_dssp SSEEEEEETTEEE-ECCSCSCH----HHHHHHHHHH
T ss_pred CCEEEEEcCCCcc-cccCcccH----HHHHHHHhhc
Confidence 77899987 58899888 6777776653
No 82
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.71 E-value=1.6e-17 Score=127.78 Aligned_cols=104 Identities=18% Similarity=0.282 Sum_probs=87.4
Q ss_pred cceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE---
Q 030114 75 VELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS--- 151 (183)
Q Consensus 75 ~~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~--- 151 (183)
..+.++.+.++|.+++..+ ..+++|||+||++||++|+.+.|.|.++++.| +++.|++||++ ++. ++.+|+|.
T Consensus 99 g~v~~i~~~~~f~~~v~~~-~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~-~~v~f~~vd~~-~~~-l~~~~~i~~~P 174 (217)
T 2trc_P 99 GFVYELETGEQFLETIEKE-QKVTTIVVNIYEDGVRGCDALNSSLECLAAEY-PMVKFCKIRAS-NTG-AGDRFSSDVLP 174 (217)
T ss_dssp CSEEECCSHHHHHHHHHHS-CTTCEEEEEEECTTSTTHHHHHHHHHHHHTTC-TTSEEEEEEHH-HHT-CSTTSCGGGCS
T ss_pred CeEEEcCCHHHHHHHHHhc-CCCcEEEEEEECCCCccHHHHHHHHHHHHHHC-CCeEEEEEECC-cHH-HHHHCCCCCCC
Confidence 4577887899999998543 23589999999999999999999999999999 68999999999 555 88999988
Q ss_pred ---EeeCCeEEEEEecCcch---hhHHHHHHHHHHhh
Q 030114 152 ---IWKDGEMKSEVIGGHKA---WLVIEEVREMIKKF 182 (183)
Q Consensus 152 ---~~~~Gk~v~~~~G~~~~---~~~~~~l~~~i~~~ 182 (183)
+|++|+++.+++|..+. .+..++|+.+|.++
T Consensus 175 Tl~~~~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 175 TLLVYKGGELISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp EEEEEETTEEEEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred EEEEEECCEEEEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 88999999999998763 23347888888764
No 83
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.71 E-value=1.4e-17 Score=130.16 Aligned_cols=105 Identities=16% Similarity=0.252 Sum_probs=87.5
Q ss_pred ccceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE--
Q 030114 74 SVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS-- 151 (183)
Q Consensus 74 ~~~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~-- 151 (183)
...+.+|.+.++|.+.+..+ ..+++|||+|||+||++|+.+.|.|.+++++| +++.|++||++. ++ ++.+|+|.
T Consensus 111 ~G~V~ei~s~~~f~~~v~~~-~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~-~~v~f~kVd~d~-~~-l~~~~~I~~~ 186 (245)
T 1a0r_P 111 YGFVYELESGEQFLETIEKE-QKITTIVVHIYEDGIKGCDALNSSLICLAAEY-PMVKFCKIKASN-TG-AGDRFSSDVL 186 (245)
T ss_dssp CCSEEECCSHHHHHHHHHSS-CTTCEEEEEEECTTSTTHHHHHHHHHHHHHHC-TTSEEEEEEHHH-HC-CTTSSCTTTC
T ss_pred CCeEEEeCCHHHHHHHHHHh-cCCCEEEEEEECCCChHHHHHHHHHHHHHHHC-CCCEEEEEeCCc-HH-HHHHCCCCCC
Confidence 34577888889999998422 24789999999999999999999999999999 569999999987 44 78889888
Q ss_pred ----EeeCCeEEEEEecCcch---hhHHHHHHHHHHhh
Q 030114 152 ----IWKDGEMKSEVIGGHKA---WLVIEEVREMIKKF 182 (183)
Q Consensus 152 ----~~~~Gk~v~~~~G~~~~---~~~~~~l~~~i~~~ 182 (183)
+|++|+++.+++|.... ....+.|+.+|.++
T Consensus 187 PTll~~~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~ 224 (245)
T 1a0r_P 187 PTLLVYKGGELLSNFISVTEQLAEEFFTGDVESFLNEY 224 (245)
T ss_dssp SEEEEEETTEEEEEETTGGGGSCTTCCHHHHHHHHHTT
T ss_pred CEEEEEECCEEEEEEeCCcccccccccHHHHHHHHHHc
Confidence 88999999999998652 24557888888764
No 84
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.71 E-value=9.4e-18 Score=123.73 Aligned_cols=101 Identities=12% Similarity=0.184 Sum_probs=77.6
Q ss_pred cCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHH---HHHHHHhcCCeEEEEEEcCCChHHH------------
Q 030114 80 INDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKL---EKLAAEFDTKLKFYYVDVNKVSKDL------------ 144 (183)
Q Consensus 80 i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l---~~la~~~~~~v~~~~vd~d~~~~~~------------ 144 (183)
..+..+|++.+..++..+++++|+|||+||++|+.+.+.+ .++.+.+++++.++.||+++..+ +
T Consensus 30 ~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~~~-~~~~~~~~~~~~~ 108 (172)
T 3f9u_A 30 HAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNKTP-LTEPVKIMENGTE 108 (172)
T ss_dssp CCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCCCE-EEEEEEEEETTEE
T ss_pred ccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCcccc-cchhhhhhhcchh
Confidence 3456788898888778899999999999999999985444 55665554579999999987753 2
Q ss_pred --------------HHhcCeE------Ee-eCCeEEEEEecCcc-hhhHHHHHHHHHHh
Q 030114 145 --------------VKRGNIS------IW-KDGEMKSEVIGGHK-AWLVIEEVREMIKK 181 (183)
Q Consensus 145 --------------~~~~~i~------~~-~~Gk~v~~~~G~~~-~~~~~~~l~~~i~~ 181 (183)
+++|+|. ++ ++|+++.++.|..+ .+.+.+.|.+.+++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l~~ 167 (172)
T 3f9u_A 109 RTLRTVGDKWSYLQRVKFGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGLEN 167 (172)
T ss_dssp EEEEEHHHHHHHHHHHHHSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhHHHHHHcCCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHHHHHH
Confidence 6788888 44 89999999999998 84454555554443
No 85
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.71 E-value=1.1e-16 Score=123.34 Aligned_cols=93 Identities=24% Similarity=0.478 Sum_probs=82.0
Q ss_pred cCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCC---eEEEEEEcCCChHHHHHhcCeE-----
Q 030114 80 INDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTK---LKFYYVDVNKVSKDLVKRGNIS----- 151 (183)
Q Consensus 80 i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~---v~~~~vd~d~~~~~~~~~~~i~----- 151 (183)
..+.++|++.+ ..+++++|+|||+||++|+.+.|.++++++.+.++ +.|+.||++.+++ ++++|+|+
T Consensus 134 ~~~~~~~~~~~----~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~-l~~~~~v~~~Pt~ 208 (241)
T 3idv_A 134 VLTKENFDEVV----NDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETD-LAKRFDVSGYPTL 208 (241)
T ss_dssp ECCTTTHHHHH----HHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHH-HHHHTTCCSSSEE
T ss_pred eccHHHHHHhh----ccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHH-HHHHcCCcccCEE
Confidence 44677899988 56789999999999999999999999999998543 9999999999988 99999999
Q ss_pred -EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 -IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 -~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
++++|+.+. +.|..+. +.|.++|+++
T Consensus 209 ~~~~~g~~~~-~~g~~~~----~~l~~~l~~~ 235 (241)
T 3idv_A 209 KIFRKGRPYD-YNGPREK----YGIVDYMIEQ 235 (241)
T ss_dssp EEEETTEEEE-CCSCCSH----HHHHHHHHHH
T ss_pred EEEECCeEEE-ecCCCCH----HHHHHHHHhh
Confidence 788999877 8898887 8888888765
No 86
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.54 E-value=9e-19 Score=118.10 Aligned_cols=97 Identities=27% Similarity=0.613 Sum_probs=81.6
Q ss_pred EecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE------
Q 030114 78 EPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS------ 151 (183)
Q Consensus 78 ~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~------ 151 (183)
.+++ .++|.+.+. ..+++++|.||++||++|+.+.|.++++++++++++.++.+|++.+++ ++++|+|.
T Consensus 4 ~~l~-~~~~~~~~~---~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~v~~~Pt~~ 78 (106)
T 2yj7_A 4 IEVT-DENFEQEVL---KSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENPN-TAAQYGIRSIPTLL 78 (106)
Confidence 3454 345554442 578999999999999999999999999999997689999999999887 99999998
Q ss_pred EeeCCeEEEEEecCcchhhHHHHHHHHHHhhC
Q 030114 152 IWKDGEMKSEVIGGHKAWLVIEEVREMIKKFV 183 (183)
Q Consensus 152 ~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~l 183 (183)
++++|+.+.++.|..+. ++|.++|+++|
T Consensus 79 ~~~~g~~~~~~~g~~~~----~~l~~~l~~~l 106 (106)
T 2yj7_A 79 LFKNGQVVDRLVGAQPK----EALKERIDKHL 106 (106)
Confidence 66899999999999887 78888887654
No 87
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.70 E-value=1.1e-16 Score=122.58 Aligned_cols=92 Identities=17% Similarity=0.183 Sum_probs=79.6
Q ss_pred CchhHHHHHHHhhhCCCcE-EEEEeCCCChhhhhhhHHHHHHHHHhc----CCeEEEEEEcCCChHHHHHhcCeE-----
Q 030114 82 DSDHLDQILLRAQELSQPI-LIDWMASWCRKCIYLKPKLEKLAAEFD----TKLKFYYVDVNKVSKDLVKRGNIS----- 151 (183)
Q Consensus 82 ~~~~~~~~l~~a~~~~k~v-lv~F~a~wC~~C~~~~p~l~~la~~~~----~~v~~~~vd~d~~~~~~~~~~~i~----- 151 (183)
+.+.++.+. ..++++ +|+|||+||++|+.+.|.++++++++. +++.++.||++.+++ ++++|+|.
T Consensus 122 ~~~~~~~~~----~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~~~-l~~~~~v~~~Pt~ 196 (226)
T 1a8l_A 122 MDETKQAIR----NIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYPE-WADQYNVMAVPKI 196 (226)
T ss_dssp CHHHHHHHT----TCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCHH-HHHHTTCCSSCEE
T ss_pred CHHHHHHHH----hcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccCHH-HHHhCCCcccCeE
Confidence 355666654 456677 999999999999999999999999996 589999999999987 99999998
Q ss_pred -EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 -IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 -~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
++++|+.+.++.|..+. ++|.++|+++
T Consensus 197 ~~~~~G~~~~~~~G~~~~----~~l~~~l~~~ 224 (226)
T 1a8l_A 197 VIQVNGEDRVEFEGAYPE----KMFLEKLLSA 224 (226)
T ss_dssp EEEETTEEEEEEESCCCH----HHHHHHHHHH
T ss_pred EEEeCCceeEEEcCCCCH----HHHHHHHHHh
Confidence 78999999999999998 7788877765
No 88
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.69 E-value=1.8e-16 Score=135.18 Aligned_cols=97 Identities=20% Similarity=0.442 Sum_probs=86.0
Q ss_pred ceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcC-CeEEEEEEcCCChHHHHHhcCeE---
Q 030114 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNKVSKDLVKRGNIS--- 151 (183)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~d~~~~~~~~~~~i~--- 151 (183)
.+..+ +.++|++.+ ..+++++|+||||||++|+.+.|.|+++++.+++ ++.|++||++.+++ ++++|+|+
T Consensus 15 ~v~~l-~~~~f~~~~----~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~~~-l~~~~~v~~~P 88 (504)
T 2b5e_A 15 AVVKL-ATDSFNEYI----QSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQD-LCMEHNIPGFP 88 (504)
T ss_dssp SCEEC-CTTTHHHHH----TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCHH-HHHHTTCCSSS
T ss_pred CcEEC-CHHHHHHHH----hcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCCHH-HHHhcCCCcCC
Confidence 45566 467899988 6789999999999999999999999999999977 49999999999988 99999999
Q ss_pred ---EeeCCeE--EEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 ---IWKDGEM--KSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 ---~~~~Gk~--v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
+|++|+. +.++.|..+. +.|.+++.+.
T Consensus 89 t~~~~~~g~~~~~~~~~G~~~~----~~l~~~l~~~ 120 (504)
T 2b5e_A 89 SLKIFKNSDVNNSIDYEGPRTA----EAIVQFMIKQ 120 (504)
T ss_dssp EEEEEETTCTTCEEECCSCCSH----HHHHHHHHHH
T ss_pred EEEEEeCCccccceeecCCCCH----HHHHHHHHHh
Confidence 8899997 8899999888 7888887764
No 89
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.69 E-value=1.3e-16 Score=135.15 Aligned_cols=96 Identities=21% Similarity=0.393 Sum_probs=85.2
Q ss_pred eEecCCchhHHHHHHHhhhCC---CcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE--
Q 030114 77 LEPINDSDHLDQILLRAQELS---QPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS-- 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~---k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~-- 151 (183)
+..+ +.++|++.+ ..+ ++++|+||||||++|+.+.|.|+++++.+++.+.|+.||++..++ ++++|+|+
T Consensus 3 v~~l-~~~~f~~~i----~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~-l~~~~~v~~~ 76 (481)
T 3f8u_A 3 VLEL-TDDNFESRI----SDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGIVPLAKVDCTANTN-TCNKYGVSGY 76 (481)
T ss_dssp CEEE-CTTTHHHHT----TCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCCEEEEETTTCHH-HHHHTTCCEE
T ss_pred eEEe-cHHHHHHHH----HhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCceEEEEEECCCCHH-HHHhcCCCCC
Confidence 3445 467899988 455 999999999999999999999999999997779999999999998 99999998
Q ss_pred ----EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 ----IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 ----~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
+|++|+.+.++.|..+. +.|.+++.++
T Consensus 77 Ptl~~~~~g~~~~~~~G~~~~----~~l~~~~~~~ 107 (481)
T 3f8u_A 77 PTLKIFRDGEEAGAYDGPRTA----DGIVSHLKKQ 107 (481)
T ss_dssp SEEEEEETTEEEEECCSCSSH----HHHHHHHHHH
T ss_pred CEEEEEeCCceeeeecCccCH----HHHHHHHHhh
Confidence 88999999999999988 8888888765
No 90
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.68 E-value=6.1e-17 Score=105.31 Aligned_cols=79 Identities=24% Similarity=0.347 Sum_probs=69.9
Q ss_pred CcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE----EeeCCeEEEEEecCcchhhHHH
Q 030114 98 QPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS----IWKDGEMKSEVIGGHKAWLVIE 173 (183)
Q Consensus 98 k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~----~~~~Gk~v~~~~G~~~~~~~~~ 173 (183)
.++++.||++||++|+.+.|.++++++++++++.++.+|++++++ ++++|+|. ++-+|++ ++.|..+. +
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~-~~~~~~v~~~Pt~~~~G~~--~~~G~~~~----~ 75 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENPQ-KAMEYGIMAVPTIVINGDV--EFIGAPTK----E 75 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSSCC-TTTSTTTCCSSEEEETTEE--ECCSSSSS----H
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCCCHH-HHHHCCCcccCEEEECCEE--eeecCCCH----H
Confidence 578999999999999999999999999997789999999999987 89999998 3339987 88998787 8
Q ss_pred HHHHHHHhhC
Q 030114 174 EVREMIKKFV 183 (183)
Q Consensus 174 ~l~~~i~~~l 183 (183)
+|.++|+++|
T Consensus 76 ~l~~~l~~~l 85 (85)
T 1fo5_A 76 ALVEAIKKRL 85 (85)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhC
Confidence 8888888765
No 91
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.68 E-value=6.9e-17 Score=105.05 Aligned_cols=78 Identities=17% Similarity=0.208 Sum_probs=68.6
Q ss_pred cEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE----EeeCCeEEEEEecCcchhhHHHH
Q 030114 99 PILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS----IWKDGEMKSEVIGGHKAWLVIEE 174 (183)
Q Consensus 99 ~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~----~~~~Gk~v~~~~G~~~~~~~~~~ 174 (183)
..++.||++||++|+.+.|.++++++++++++.++.+|++++++ ++++|+|. ++-||++ ++.|..+. ++
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~-~~~~~~v~~~Pt~~~~G~~--~~~G~~~~----~~ 75 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDRE-KAIEYGLMAVPAIAINGVV--RFVGAPSR----EE 75 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTCGG-GGGGTCSSCSSEEEETTTE--EEECSSCC----HH
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCCCHH-HHHhCCceeeCEEEECCEE--EEccCCCH----HH
Confidence 46899999999999999999999999997789999999999987 89999998 3339987 88998887 78
Q ss_pred HHHHHHhhC
Q 030114 175 VREMIKKFV 183 (183)
Q Consensus 175 l~~~i~~~l 183 (183)
|.++|++++
T Consensus 76 l~~~l~~~l 84 (85)
T 1nho_A 76 LFEAINDEM 84 (85)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHh
Confidence 888887764
No 92
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.68 E-value=2.1e-16 Score=117.71 Aligned_cols=99 Identities=15% Similarity=0.210 Sum_probs=78.1
Q ss_pred ceEecCCchhHHHHHHHhhhCCCcEEEEEeC-------CCChhhhhhhHHHHHHHHHhc-----CCeEEEEEEcCCChHH
Q 030114 76 ELEPINDSDHLDQILLRAQELSQPILIDWMA-------SWCRKCIYLKPKLEKLAAEFD-----TKLKFYYVDVNKVSKD 143 (183)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a-------~wC~~C~~~~p~l~~la~~~~-----~~v~~~~vd~d~~~~~ 143 (183)
.+.+++ .++|++.+.. .++.++||+||| +||+||+.+.|.|++++++|. +++.|++||+|++++
T Consensus 19 ~vi~lt-~~nF~~~v~~--~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~- 94 (178)
T 3ga4_A 19 GVITVT-ADNYPLLSRG--VPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQ- 94 (178)
T ss_dssp SEEECC-TTTHHHHTTC--CTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHH-
T ss_pred CCEECC-HHHHHHHHcc--cCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHH-
Confidence 355664 6689988721 235689999999 499999999999999999997 789999999999998
Q ss_pred HHHhcCeE------EeeCCeEE------------EEE---ec-CcchhhHHHHHHHHHHhh
Q 030114 144 LVKRGNIS------IWKDGEMK------------SEV---IG-GHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 144 ~~~~~~i~------~~~~Gk~v------------~~~---~G-~~~~~~~~~~l~~~i~~~ 182 (183)
++++|+|+ +|++|+.. .++ .| ..+. +.|.+||.+.
T Consensus 95 la~~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~a----e~la~fi~~~ 151 (178)
T 3ga4_A 95 LVKDLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENT----LQFGDFLAKI 151 (178)
T ss_dssp HHHHTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCH----HHHHHHHHHH
T ss_pred HHHHcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCH----HHHHHHHHHh
Confidence 99999999 88888532 222 13 4444 7888888764
No 93
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.67 E-value=2.5e-16 Score=114.43 Aligned_cols=93 Identities=15% Similarity=0.314 Sum_probs=75.3
Q ss_pred hhHHHHHHHhhhCCCcEEEEEe-CCCChhhhhhhHHH---HHHHHHhcCCeEEEEEEcCCCh----------HHHHHhcC
Q 030114 84 DHLDQILLRAQELSQPILIDWM-ASWCRKCIYLKPKL---EKLAAEFDTKLKFYYVDVNKVS----------KDLVKRGN 149 (183)
Q Consensus 84 ~~~~~~l~~a~~~~k~vlv~F~-a~wC~~C~~~~p~l---~~la~~~~~~v~~~~vd~d~~~----------~~~~~~~~ 149 (183)
+++.+.+..++..+++++|+|| |+||++|+.+.|.+ .++.+.++.++.++.+|++..+ ..++++|+
T Consensus 34 ~~~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~ 113 (154)
T 2ju5_A 34 ESYAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYK 113 (154)
T ss_dssp ECHHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcC
Confidence 4567777666678999999999 99999999999999 7887766567999999998764 24899999
Q ss_pred eE------Ee-eCCeEEEEEecCc--chhhHHHHHHHHHHh
Q 030114 150 IS------IW-KDGEMKSEVIGGH--KAWLVIEEVREMIKK 181 (183)
Q Consensus 150 i~------~~-~~Gk~v~~~~G~~--~~~~~~~~l~~~i~~ 181 (183)
|. ++ ++|+++.++ |.. +. +++.++|++
T Consensus 114 v~~~Pt~~~~d~~G~~~~~~-G~~~~~~----~~l~~~l~~ 149 (154)
T 2ju5_A 114 VTGFPELVFIDAEGKQLARM-GFEPGGG----AAYVSKVKS 149 (154)
T ss_dssp CCSSSEEEEECTTCCEEEEE-CCCTTCH----HHHHHHHHH
T ss_pred CCCCCEEEEEcCCCCEEEEe-cCCCCCH----HHHHHHHHH
Confidence 98 44 899999999 998 66 555555544
No 94
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.67 E-value=5.1e-16 Score=126.82 Aligned_cols=94 Identities=19% Similarity=0.268 Sum_probs=82.4
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHH-------HHHHHHHhcC-CeEEEEEEcCCChHHHHHhc
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPK-------LEKLAAEFDT-KLKFYYVDVNKVSKDLVKRG 148 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~-------l~~la~~~~~-~v~~~~vd~d~~~~~~~~~~ 148 (183)
+.++ +.++|++.+ ..+++++|+||||||+ |+.+.|. ++++++.+++ ++.+++||++++++ ++++|
T Consensus 13 v~~l-~~~~f~~~i----~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~-l~~~~ 85 (350)
T 1sji_A 13 VVSL-TEKNFKQVL----KKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAK-LAKKL 85 (350)
T ss_dssp CEEE-CHHHHHHHH----TTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHH-HHHHH
T ss_pred cEEC-CHHHHHHHH----hhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHH-HHHhc
Confidence 4555 467899998 6789999999999999 9999999 8999999866 59999999999988 99999
Q ss_pred CeE------EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 149 NIS------IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 149 ~i~------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
+|+ +|++|+ +.++.|..+. +.|.+++++.
T Consensus 86 ~v~~~Pt~~~~~~g~-~~~~~G~~~~----~~l~~~i~~~ 120 (350)
T 1sji_A 86 GFDEEGSLYVLKGDR-TIEFDGEFAA----DVLVEFLLDL 120 (350)
T ss_dssp TCCSTTEEEEEETTE-EEEECSCCCH----HHHHHHHHTT
T ss_pred CCCccceEEEEECCc-EEEecCCCCH----HHHHHHHHHh
Confidence 999 889999 5689999888 8888888765
No 95
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.67 E-value=1.9e-16 Score=110.86 Aligned_cols=98 Identities=14% Similarity=0.257 Sum_probs=77.8
Q ss_pred ceEecCCchhHHHHHHHhhhCCCcEEEEEeCC-------CChhhhhhhHHHHHHHHHhcCCeEEEEEEc-------CCCh
Q 030114 76 ELEPINDSDHLDQILLRAQELSQPILIDWMAS-------WCRKCIYLKPKLEKLAAEFDTKLKFYYVDV-------NKVS 141 (183)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~-------wC~~C~~~~p~l~~la~~~~~~v~~~~vd~-------d~~~ 141 (183)
....+.+.++|.+.+..+ .+++++|+|||+ ||++|+.+.|.|+++++++++++.|+.||+ +.++
T Consensus 5 ~~v~~~~~~~~~~~~~~~--~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~ 82 (123)
T 1wou_A 5 EEVSVSGFEEFHRAVEQH--NGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNN 82 (123)
T ss_dssp EEEEEESHHHHHHHHHTT--TTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTC
T ss_pred eeEEeccHHHHHHHHHHh--CCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchhH
Confidence 455677889999998421 489999999999 999999999999999999977899999999 6777
Q ss_pred HHHHHhcCeE------EeeCCeEEEEEecCcchhhHHHHHHHHHHh
Q 030114 142 KDLVKRGNIS------IWKDGEMKSEVIGGHKAWLVIEEVREMIKK 181 (183)
Q Consensus 142 ~~~~~~~~i~------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~ 181 (183)
. ++++|+|. ++++|+.+....|. +. +.|+++|++
T Consensus 83 ~-~~~~~~i~~~Pt~~~~~~~~~~~g~~~~-~~----~~l~~~i~~ 122 (123)
T 1wou_A 83 D-FRKNLKVTAVPTLLKYGTPQKLVESECL-QA----NLVEMLFSE 122 (123)
T ss_dssp H-HHHHHCCCSSSEEEETTSSCEEEGGGGG-CH----HHHHHHHHC
T ss_pred H-HHHHCCCCeeCEEEEEcCCceEeccccC-CH----HHHHHHHhc
Confidence 6 89999998 66665443333332 23 788888864
No 96
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.67 E-value=1.8e-17 Score=116.93 Aligned_cols=98 Identities=18% Similarity=0.419 Sum_probs=76.6
Q ss_pred ceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhc--CCeEEEEEEcCCChHHHHHhcCeE--
Q 030114 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFD--TKLKFYYVDVNKVSKDLVKRGNIS-- 151 (183)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~--~~v~~~~vd~d~~~~~~~~~~~i~-- 151 (183)
.+..++ .++|+..+. ..+++++|+||++||++|+.+.|.|++++++++ +++.|+.||++.++. ++++|+|.
T Consensus 8 ~v~~l~-~~~~~~~~~---~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~-~~~~~~v~~~ 82 (133)
T 2dj3_A 8 PVKVVV-GKTFDAIVM---DPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDI-TNDQYKVEGF 82 (133)
T ss_dssp SSEECC-TTTCCCCCT---CTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCC-CCSSCCCSSS
T ss_pred ceEEEc-CCCHHHHhc---cCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHH-HHhhcCCCcC
Confidence 355554 456766662 358999999999999999999999999999996 469999999999887 88899998
Q ss_pred ----EeeCCeEEE--EEe-cCcchhhHHHHHHHHHHhh
Q 030114 152 ----IWKDGEMKS--EVI-GGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 ----~~~~Gk~v~--~~~-G~~~~~~~~~~l~~~i~~~ 182 (183)
++.+|+.+. ++. |..+. ++|.++|+++
T Consensus 83 Pt~~~~~~g~~~~~~~~~gg~~~~----~~l~~~l~~~ 116 (133)
T 2dj3_A 83 PTIYFAPSGDKKNPIKFEGGNRDL----EHLSKFIDEH 116 (133)
T ss_dssp SEEEEECTTCTTSCEECCSSCCST----THHHHHHHHH
T ss_pred CEEEEEeCCCcccceEecCCCcCH----HHHHHHHHHh
Confidence 666766433 456 54676 6777777665
No 97
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.66 E-value=5.6e-17 Score=112.44 Aligned_cols=95 Identities=22% Similarity=0.464 Sum_probs=76.5
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcC-----CeEEEEEEcCCChHHHHHhcCeE
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-----KLKFYYVDVNKVSKDLVKRGNIS 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~-----~v~~~~vd~d~~~~~~~~~~~i~ 151 (183)
+..++ .++|++.+. ..+++++|+|||+||++|+.+.|.|+++++++++ ++.|+.||+++++ +++ +|.
T Consensus 9 v~~l~-~~~f~~~v~---~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~--~~~--~v~ 80 (121)
T 2djj_A 9 VTVVV-AKNYNEIVL---DDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND--VPD--EIQ 80 (121)
T ss_dssp SEECC-TTTTTTSSS---CTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC--CSS--CCS
T ss_pred eEEec-ccCHHHHhh---cCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc--ccc--ccC
Confidence 45554 566777642 4789999999999999999999999999999976 7999999999876 444 776
Q ss_pred ------EeeCCeE--EEEEecCcchhhHHHHHHHHHHhhC
Q 030114 152 ------IWKDGEM--KSEVIGGHKAWLVIEEVREMIKKFV 183 (183)
Q Consensus 152 ------~~~~Gk~--v~~~~G~~~~~~~~~~l~~~i~~~l 183 (183)
++++|+. +.++.|..+. ++|.++|++++
T Consensus 81 ~~Pt~~~~~~~~~~~~~~~~G~~~~----~~l~~~i~~~~ 116 (121)
T 2djj_A 81 GFPTIKLYPAGAKGQPVTYSGSRTV----EDLIKFIAENG 116 (121)
T ss_dssp SSSEEEEECSSCTTSCCCCCCCSCH----HHHHHHHHHTS
T ss_pred cCCeEEEEeCcCCCCceEecCCCCH----HHHHHHHHhcc
Confidence 6666644 7788998887 88888888753
No 98
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.64 E-value=1.2e-15 Score=125.59 Aligned_cols=95 Identities=15% Similarity=0.203 Sum_probs=80.1
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhh------HHHHHHHHHhcC-CeEEEEEEcCCChHHHHHhcC
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLK------PKLEKLAAEFDT-KLKFYYVDVNKVSKDLVKRGN 149 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~------p~l~~la~~~~~-~v~~~~vd~d~~~~~~~~~~~ 149 (183)
+..+ +.++|++++ ..+++|+|+||||||++|+... |.++++++.+++ ++.|++||++++++ +|++|+
T Consensus 15 v~~l-t~~~f~~~i----~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~-l~~~~~ 88 (367)
T 3us3_A 15 VINV-NAKNYKNVF----KKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAA-VAKKLG 88 (367)
T ss_dssp CEEC-CTTTHHHHH----HHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHH-HHHHHT
T ss_pred cEEC-CHHHHHHHH----hhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHH-HHHHcC
Confidence 5555 467899998 5789999999999999974433 689999999866 59999999999998 999999
Q ss_pred eE------EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 150 IS------IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 150 i~------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
|+ +|++|+++ ++.|..+. +.|.++|.++
T Consensus 89 V~~~PTl~~f~~G~~~-~y~G~~~~----~~i~~~i~~~ 122 (367)
T 3us3_A 89 LTEEDSIYVFKEDEVI-EYDGEFSA----DTLVEFLLDV 122 (367)
T ss_dssp CCSTTEEEEEETTEEE-ECCSCCSH----HHHHHHHHHH
T ss_pred CCcCceEEEEECCcEE-EeCCCCCH----HHHHHHHHHh
Confidence 99 88999875 78999988 7888887654
No 99
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.44 E-value=1.8e-17 Score=116.56 Aligned_cols=83 Identities=12% Similarity=0.292 Sum_probs=69.7
Q ss_pred hCCCcEEEEEeCCCChhhhhhhHHH---HHHHHHhcCCeEEEEEEcC--CChHHHHHhcCeE------Ee--eCCeE--E
Q 030114 95 ELSQPILIDWMASWCRKCIYLKPKL---EKLAAEFDTKLKFYYVDVN--KVSKDLVKRGNIS------IW--KDGEM--K 159 (183)
Q Consensus 95 ~~~k~vlv~F~a~wC~~C~~~~p~l---~~la~~~~~~v~~~~vd~d--~~~~~~~~~~~i~------~~--~~Gk~--v 159 (183)
..+++++|+|||+||++|+.+.|.+ +++++.+++++.++.||++ +..+ ++++|+|. ++ ++|++ +
T Consensus 17 ~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~-~~~~~~v~~~Pt~~~~d~~~G~~~~~ 95 (130)
T 2lst_A 17 AHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPEGQE-LARRYRVPGTPTFVFLVPKAGAWEEV 95 (130)
Confidence 6889999999999999999999999 9999988777999999996 3344 89999998 44 57998 8
Q ss_pred EEEecCcchhhHHHHHHHHHHhh
Q 030114 160 SEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 160 ~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
.++.|..+. ++|.++|+++
T Consensus 96 ~~~~G~~~~----~~l~~~l~~~ 114 (130)
T 2lst_A 96 GRLFGSRPR----AEFLKELRQV 114 (130)
Confidence 999999888 5566665543
No 100
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.63 E-value=1.1e-15 Score=118.87 Aligned_cols=98 Identities=20% Similarity=0.351 Sum_probs=72.7
Q ss_pred ceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcC---CeEEEEEEc--CCChHHHHHhcCe
Q 030114 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT---KLKFYYVDV--NKVSKDLVKRGNI 150 (183)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~---~v~~~~vd~--d~~~~~~~~~~~i 150 (183)
.+..++ .++|++.+. ..+++++|+|||+||++|+.+.|.|+++++++.+ ++.|+.||+ +++++ ++++|+|
T Consensus 13 ~v~~l~-~~~f~~~i~---~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~-l~~~~~v 87 (244)
T 3q6o_A 13 PLTLLQ-ADTVRGAVL---GSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSA-VCRDFNI 87 (244)
T ss_dssp SSEEEC-TTTHHHHHS---SCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHH-HHHHTTC
T ss_pred CceeCC-hhhHHHHHh---hCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHH-HHHHcCC
Confidence 355565 567877763 4569999999999999999999999999999976 799999999 55666 9999999
Q ss_pred E------EeeCCeEE-----EEEecCcchhhHHHHHHHHH
Q 030114 151 S------IWKDGEMK-----SEVIGGHKAWLVIEEVREMI 179 (183)
Q Consensus 151 ~------~~~~Gk~v-----~~~~G~~~~~~~~~~l~~~i 179 (183)
+ ++++|+.. .++.| .+.+.+.+.|.+++
T Consensus 88 ~~~Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l 126 (244)
T 3q6o_A 88 PGFPTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDAL 126 (244)
T ss_dssp CSSSEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHH
T ss_pred CccCEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHH
Confidence 8 66664321 14555 46633444444443
No 101
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.62 E-value=2.6e-16 Score=109.30 Aligned_cols=85 Identities=7% Similarity=0.017 Sum_probs=61.5
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHh--cCCeEEEEEEcCCCh-HHHHHhcCeE------EeeCCeEEEEEecCc
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEF--DTKLKFYYVDVNKVS-KDLVKRGNIS------IWKDGEMKSEVIGGH 166 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~--~~~v~~~~vd~d~~~-~~~~~~~~i~------~~~~Gk~v~~~~G~~ 166 (183)
+...+||+|||+||++|+.+.|.+....+.. ...+.+++||++.+. ..++.+++|. +|++|+++.|++|+.
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G~ev~Ri~G~~ 96 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAGDVESGRLEGYP 96 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETTEEEEEEECCC
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCCCCchhHHHHCCCCCCCEEEEEECCEEEeeecCCC
Confidence 5678999999999999999987543322110 012789999999863 3488888888 889999999999999
Q ss_pred chhhHHHHHHHHHH
Q 030114 167 KAWLVIEEVREMIK 180 (183)
Q Consensus 167 ~~~~~~~~l~~~i~ 180 (183)
+++.+...|..++.
T Consensus 97 ~~~~f~~~L~~~l~ 110 (116)
T 3dml_A 97 GEDFFWPMLARLIG 110 (116)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh
Confidence 99444444444443
No 102
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.62 E-value=7.2e-15 Score=104.44 Aligned_cols=84 Identities=17% Similarity=0.295 Sum_probs=68.2
Q ss_pred hCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCC---------------------------ChHHHHHh
Q 030114 95 ELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNK---------------------------VSKDLVKR 147 (183)
Q Consensus 95 ~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~---------------------------~~~~~~~~ 147 (183)
..+++++|.||++||++|+.+.|.+.++++++++++.++.|+++. ... +++.
T Consensus 27 ~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~ 105 (148)
T 2b5x_A 27 IGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDHA-LTDA 105 (148)
T ss_dssp TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEECSSCH-HHHH
T ss_pred cCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEECCchh-HHHH
Confidence 468999999999999999999999999999997679999999653 333 8889
Q ss_pred cCeE-------EeeCCeEEEEEecCcchhhHHHHHHHHH
Q 030114 148 GNIS-------IWKDGEMKSEVIGGHKAWLVIEEVREMI 179 (183)
Q Consensus 148 ~~i~-------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i 179 (183)
|+|. +.++|+++.++.|..+.+.+.+.|.+.+
T Consensus 106 ~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l 144 (148)
T 2b5x_A 106 FENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVL 144 (148)
T ss_dssp TCCCCSSEEEEECTTCBEEEEEESCSTTHHHHHHHHHHH
T ss_pred hCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHH
Confidence 9988 3389999999999988844444444433
No 103
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.62 E-value=6.1e-16 Score=109.81 Aligned_cols=92 Identities=13% Similarity=0.162 Sum_probs=78.2
Q ss_pred ecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE-------
Q 030114 79 PINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS------- 151 (183)
Q Consensus 79 ~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~------- 151 (183)
++ +.++|++.+ +.+.+++|+|||+ |++|+.+.|.|+++|++|++++.|+++|++++++ ++++|+|+
T Consensus 10 ~~-t~~~f~~~~----~~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~~~~-~a~~~gi~~~~iPtl 82 (133)
T 2djk_A 10 EI-GPETYSDYM----SAGIPLAYIFAET-AEERKELSDKLKPIAEAQRGVINFGTIDAKAFGA-HAGNLNLKTDKFPAF 82 (133)
T ss_dssp EC-CHHHHHHHH----HTTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTTSEEEEECTTTTGG-GTTTTTCCSSSSSEE
T ss_pred cc-ChHHHHHHh----cCCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCeEEEEEEchHHhHH-HHHHcCCCcccCCEE
Confidence 44 467888877 5789999999999 8999999999999999998899999999999998 89999987
Q ss_pred -EeeC--CeEEEEEe--cCcchhhHHHHHHHHHHhh
Q 030114 152 -IWKD--GEMKSEVI--GGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 -~~~~--Gk~v~~~~--G~~~~~~~~~~l~~~i~~~ 182 (183)
++++ |+. .+.. |..+. +.|++||+++
T Consensus 83 ~i~~~~~g~~-~~~~~~g~~~~----~~l~~fi~~~ 113 (133)
T 2djk_A 83 AIQEVAKNQK-FPFDQEKEITF----EAIKAFVDDF 113 (133)
T ss_dssp EEECTTTCCB-CCCCSSSCCCH----HHHHHHHHHH
T ss_pred EEEecCcCcc-cCCCCccccCH----HHHHHHHHHH
Confidence 7776 666 4665 88888 7777777664
No 104
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.60 E-value=1.6e-15 Score=135.34 Aligned_cols=97 Identities=14% Similarity=0.251 Sum_probs=81.6
Q ss_pred ceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE----
Q 030114 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS---- 151 (183)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~---- 151 (183)
.+..+ +.++|++.+ ..+++++|+||||||++|+.+.|.|+++++++.+.+.|++||++++++ ++++|+|+
T Consensus 117 ~v~~l-~~~~f~~~i----~~~~~~lv~Fya~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~-l~~~~~v~~~Pt 190 (780)
T 3apo_A 117 EIITL-ERREFDAAV----NSGELWFVNFYSPGSSHSHDLAPTWREFAKEVDGLLRIGAVNCGDDRM-LCRMKGVNSYPS 190 (780)
T ss_dssp TEEEC-CHHHHHHHH----TSSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCSS-CC--------CE
T ss_pred ceeee-chHhHHhhh----cCCCcEEEEEeCCCCcchhHhhHHHHHHHHHhcCceEEEEEeCCCcHH-HHHHcCCceeee
Confidence 35555 577899999 689999999999999999999999999999997789999999999987 99999998
Q ss_pred --EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 --IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 --~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
+|++|+.+.++.|..+. +.|.+++.++
T Consensus 191 ~~~~~~g~~~~~~~G~~~~----~~l~~~l~~~ 219 (780)
T 3apo_A 191 LFIFRSGMAAVKYNGDRSK----ESLVAFAMQH 219 (780)
T ss_dssp EEEECTTSCCEECCSCSCH----HHHHHHHHTT
T ss_pred EEEEeCCcEeeEecCCCCH----HHHHHHHHHh
Confidence 88999999999999988 8888888765
No 105
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.60 E-value=1.7e-16 Score=115.50 Aligned_cols=85 Identities=15% Similarity=0.187 Sum_probs=63.2
Q ss_pred cCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHH--HhcCCeEEEEEEcCCChHHHHHhcCeE------
Q 030114 80 INDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAA--EFDTKLKFYYVDVNKVSKDLVKRGNIS------ 151 (183)
Q Consensus 80 i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~--~~~~~v~~~~vd~d~~~~~~~~~~~i~------ 151 (183)
+....++++++..+...+++|+|+|||+||++|+.+.|.+.+..+ ++. +..|+.|++|..+..++.++++.
T Consensus 27 i~W~~~~~~al~~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~-~~~fv~V~vD~e~~~~~~~~~v~~~PT~~ 105 (151)
T 3ph9_A 27 ITWVQTYEEGLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMA-QNKFIMLNLMHETTDKNLSPDGQYVPRIM 105 (151)
T ss_dssp SCCCSSHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHH-HHTCEEEEESSCCSCGGGCTTCCCSSEEE
T ss_pred CcchhCHHHHHHHHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHh-hcCeEEEEecCCchhhHhhcCCCCCCEEE
Confidence 555567888887777889999999999999999999999876432 221 13466666654332267778877
Q ss_pred Eee-CCeEEEEEecC
Q 030114 152 IWK-DGEMKSEVIGG 165 (183)
Q Consensus 152 ~~~-~Gk~v~~~~G~ 165 (183)
|+. +|+++.+++|.
T Consensus 106 f~~~~G~~v~~~~G~ 120 (151)
T 3ph9_A 106 FVDPSLTVRADIAGR 120 (151)
T ss_dssp EECTTSCBCTTCCCS
T ss_pred EECCCCCEEEEEeCC
Confidence 555 89999999998
No 106
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.60 E-value=7.9e-15 Score=102.90 Aligned_cols=81 Identities=19% Similarity=0.306 Sum_probs=69.7
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCC----------------------ChHHHHHhcCeE--
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNK----------------------VSKDLVKRGNIS-- 151 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~----------------------~~~~~~~~~~i~-- 151 (183)
.+++++|.||++||++|+.+.|.+.++++++. ++.++.|+++. ... +++.|++.
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~i~~~ 100 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP-AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGV-IWARYNVPWQ 100 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSH-HHHHTTCCSS
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC-CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchh-HHHhcCCCCC
Confidence 67999999999999999999999999999996 99999999987 334 78889888
Q ss_pred -----EeeCCeEEEEEe---cCcchhhHHHHHHHHHHhhC
Q 030114 152 -----IWKDGEMKSEVI---GGHKAWLVIEEVREMIKKFV 183 (183)
Q Consensus 152 -----~~~~Gk~v~~~~---G~~~~~~~~~~l~~~i~~~l 183 (183)
+.++|+++ ++. |..+. ++|.++|++++
T Consensus 101 P~~~lid~~G~i~-~~~~~~g~~~~----~~l~~~l~~ll 135 (136)
T 1lu4_A 101 PAFVFYRADGTST-FVNNPTAAMSQ----DELSGRVAALT 135 (136)
T ss_dssp SEEEEECTTSCEE-EECCSSSCCCH----HHHHHHHHHC-
T ss_pred CEEEEECCCCcEE-EEEcCCCccCH----HHHHHHHHHHh
Confidence 34799999 999 98887 78888877653
No 107
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.59 E-value=1.4e-16 Score=117.19 Aligned_cols=86 Identities=20% Similarity=0.335 Sum_probs=65.7
Q ss_pred hCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCe--E------Ee-eCCeEEEEEecC
Q 030114 95 ELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNI--S------IW-KDGEMKSEVIGG 165 (183)
Q Consensus 95 ~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i--~------~~-~~Gk~v~~~~G~ 165 (183)
..++++||+|||+||++|+.+.|.|+++++.+..++.|+.||++..++.++..|++ . ++ ++|+++.++.|.
T Consensus 44 ~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~Pt~~~~d~~G~~~~~~~G~ 123 (164)
T 1sen_A 44 ASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDPSGKVHPEIINE 123 (164)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGGSCSCGGGCTTCSCSSEEEEECTTSCBCTTCCCT
T ss_pred hcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCchHHHHHhcccCCcCCeEEEECCCCCEEEEEeCC
Confidence 68999999999999999999999999988776555778888888775435666665 3 55 799999999995
Q ss_pred ----------cchhhHHHHHHHHHH
Q 030114 166 ----------HKAWLVIEEVREMIK 180 (183)
Q Consensus 166 ----------~~~~~~~~~l~~~i~ 180 (183)
.+.+.+.+.|.++++
T Consensus 124 ~~~~~~~~~~~~~~~l~~~l~~~l~ 148 (164)
T 1sen_A 124 NGNPSYKYFYVSAEQVVQGMKEAQE 148 (164)
T ss_dssp TSCTTSTTCCCSHHHHHHHHHHHHH
T ss_pred CCccchhcccCCHHHHHHHHHHHHH
Confidence 556444555554443
No 108
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.59 E-value=2.6e-15 Score=110.87 Aligned_cols=80 Identities=10% Similarity=0.101 Sum_probs=62.5
Q ss_pred chhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcC---eE------Ee
Q 030114 83 SDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGN---IS------IW 153 (183)
Q Consensus 83 ~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~---i~------~~ 153 (183)
.+.+...+.. ..+++++|+|||+|||||+.+.|.|+++++++ +++.|+.||+|++++ ++.+|. +. ++
T Consensus 42 ~~~~~~~l~~--~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~-~~v~~~~v~~d~~~~-~~~~~~~~~v~~iPt~i~~ 117 (167)
T 1z6n_A 42 PSALTERLQR--IERRYRLLVAGEMWCPDCQINLAALDFAQRLQ-PNIELAIISKGRAED-DLRQRLALERIAIPLVLVL 117 (167)
T ss_dssp CHHHHHHHHT--CCSCEEEEEECCTTCHHHHHHHHHHHHHHHHC-TTEEEEEECHHHHHH-HTTTTTTCSSCCSSEEEEE
T ss_pred CHHHHHHHHH--hCCCEEEEEEECCCChhHHHHHHHHHHHHHHC-CCcEEEEEECCCCHH-HHHHHHHcCCCCcCeEEEE
Confidence 3444444421 35789999999999999999999999999988 679999999998887 788776 55 55
Q ss_pred eC-CeEEEEEecCcc
Q 030114 154 KD-GEMKSEVIGGHK 167 (183)
Q Consensus 154 ~~-Gk~v~~~~G~~~ 167 (183)
++ |+++.++ |..+
T Consensus 118 ~~~G~~~~~~-g~~p 131 (167)
T 1z6n_A 118 DEEFNLLGRF-VERP 131 (167)
T ss_dssp CTTCCEEEEE-ESSC
T ss_pred CCCCCEEEEE-cCCC
Confidence 55 5887776 5554
No 109
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.58 E-value=5e-15 Score=113.68 Aligned_cols=89 Identities=13% Similarity=0.175 Sum_probs=73.9
Q ss_pred CchhHHHHHHHhhhCCCcE-EEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE----EeeCC
Q 030114 82 DSDHLDQILLRAQELSQPI-LIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS----IWKDG 156 (183)
Q Consensus 82 ~~~~~~~~l~~a~~~~k~v-lv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~----~~~~G 156 (183)
+.++|+.++ ..++++ +++||++||++|+.+.|.++++++++ +++.++.||++++++ ++++|+|. ++-+|
T Consensus 124 ~~~~~~~~~----~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~-~~v~~~~vd~~~~~~-l~~~~~v~~~Pt~~~~G 197 (229)
T 2ywm_A 124 SEKTLELLQ----VVDIPIEIWVFVTTSCGYCPSAAVMAWDFALAN-DYITSKVIDASENQD-LAEQFQVVGVPKIVINK 197 (229)
T ss_dssp CHHHHHHHT----TCCSCEEEEEEECTTCTTHHHHHHHHHHHHHHC-TTEEEEEEEGGGCHH-HHHHTTCCSSSEEEEGG
T ss_pred CHHHHHHHH----hcCCCeEEEEEECCCCcchHHHHHHHHHHHHHC-CCeEEEEEECCCCHH-HHHHcCCcccCEEEECC
Confidence 456777776 455666 88999999999999999999999998 789999999999988 99999998 33399
Q ss_pred eEEEEEecCcchhhHHHHHHHHHHh
Q 030114 157 EMKSEVIGGHKAWLVIEEVREMIKK 181 (183)
Q Consensus 157 k~v~~~~G~~~~~~~~~~l~~~i~~ 181 (183)
+ +.++.|..+. ++|.++|++
T Consensus 198 ~-~~~~~G~~~~----~~l~~~l~~ 217 (229)
T 2ywm_A 198 G-VAEFVGAQPE----NAFLGYIMA 217 (229)
T ss_dssp G-TEEEESCCCH----HHHHHHHHH
T ss_pred E-EEEeeCCCCH----HHHHHHHHH
Confidence 8 6789999998 556666554
No 110
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.58 E-value=6.1e-15 Score=126.46 Aligned_cols=99 Identities=19% Similarity=0.359 Sum_probs=77.7
Q ss_pred ceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcC---CeEEEEEEcCC--ChHHHHHhcCe
Q 030114 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT---KLKFYYVDVNK--VSKDLVKRGNI 150 (183)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~---~v~~~~vd~d~--~~~~~~~~~~i 150 (183)
.+.+++ .++|+..+. ..+++++|+|||+||++|+.+.|.|+++++++++ ++.|+.||++. +++ ++++|+|
T Consensus 13 ~V~~Lt-~~~f~~~v~---~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~-l~~~~~V 87 (519)
T 3t58_A 13 PLTLLD-ADSVRPTVL---GSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSA-VCREFNI 87 (519)
T ss_dssp SSEEEC-TTTHHHHHS---SCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHH-HHHHTTC
T ss_pred CcEECC-hHHHHHHHH---hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHH-HHHHcCC
Confidence 355565 567887763 4679999999999999999999999999999976 79999999965 555 9999999
Q ss_pred E------Eee----CCeEEEEEecCcchhhHHHHHHHHH
Q 030114 151 S------IWK----DGEMKSEVIGGHKAWLVIEEVREMI 179 (183)
Q Consensus 151 ~------~~~----~Gk~v~~~~G~~~~~~~~~~l~~~i 179 (183)
. +++ +|+.+....|..+.+.+.+.|.+++
T Consensus 88 ~~~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l 126 (519)
T 3t58_A 88 AGFPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDAL 126 (519)
T ss_dssp CSBSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHH
T ss_pred cccCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHH
Confidence 9 666 5666777888888844444444444
No 111
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.58 E-value=1.3e-14 Score=104.31 Aligned_cols=82 Identities=12% Similarity=0.273 Sum_probs=67.8
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhc-CCeEEEEEEcCCC-----------------------hHHHHHhcC--
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFD-TKLKFYYVDVNKV-----------------------SKDLVKRGN-- 149 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~-~~v~~~~vd~d~~-----------------------~~~~~~~~~-- 149 (183)
.+++++|+||++||++|+.+.|.|.+++++++ .++.++.|++|.. ...+++.|+
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGNT 102 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTCC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCCc
Confidence 68999999999999999999999999999985 4699999999732 223677788
Q ss_pred eE-------EeeCCeEEEEEecCcchhhHHHHHHHHHHh
Q 030114 150 IS-------IWKDGEMKSEVIGGHKAWLVIEEVREMIKK 181 (183)
Q Consensus 150 i~-------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~ 181 (183)
+. +.++|+++.++.|..+. ++|.++|++
T Consensus 103 v~~~P~~~lid~~G~i~~~~~g~~~~----~~l~~~l~~ 137 (151)
T 3raz_A 103 VGVLPFTVVEAPKCGYRQTITGEVNE----KSLTDAVKL 137 (151)
T ss_dssp SCCSSEEEEEETTTTEEEECCSCCCH----HHHHHHHHH
T ss_pred cCCCCEEEEECCCCcEEEEECCCCCH----HHHHHHHHH
Confidence 55 55899999999999988 566666554
No 112
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.58 E-value=1.2e-14 Score=102.84 Aligned_cols=80 Identities=23% Similarity=0.436 Sum_probs=69.5
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhc-CCeEEEEEEcCC-------------------------ChHHHHHhcC
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFD-TKLKFYYVDVNK-------------------------VSKDLVKRGN 149 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~-~~v~~~~vd~d~-------------------------~~~~~~~~~~ 149 (183)
.+++++|+||++||++|+.+.|.+.+++++++ .++.++.|+++. ... +++.|+
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~ 111 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGE-LMKEYH 111 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSH-HHHHTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchh-HHHhcC
Confidence 57899999999999999999999999999996 479999999964 334 888999
Q ss_pred eE-------EeeCCeEEEEEecCcchhhHHHHHHHHHH
Q 030114 150 IS-------IWKDGEMKSEVIGGHKAWLVIEEVREMIK 180 (183)
Q Consensus 150 i~-------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~ 180 (183)
|. +.++|+++.++.|..+. ++|.++|+
T Consensus 112 v~~~P~~~lid~~G~i~~~~~g~~~~----~~l~~~l~ 145 (145)
T 3erw_A 112 IITIPTSFLLNEKGEIEKTKIGPMTA----EQLKEWTE 145 (145)
T ss_dssp CCEESEEEEECTTCCEEEEEESCCCH----HHHHHHHC
T ss_pred cCccCeEEEEcCCCcEEEEEcCCcCH----HHHHHhhC
Confidence 88 44899999999999888 78877763
No 113
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.57 E-value=2.1e-14 Score=102.96 Aligned_cols=83 Identities=14% Similarity=0.386 Sum_probs=70.0
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcC-CeEEEEEEcCCCh---------------------HHHHHhcCeE--
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNKVS---------------------KDLVKRGNIS-- 151 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~d~~~---------------------~~~~~~~~i~-- 151 (183)
.++++||+||++||++|+.+.|.+.++++++++ ++.++.|+++..+ ..+++.|+|.
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 104 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPL 104 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCSS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCCC
Confidence 679999999999999999999999999999965 5999999998643 2378888887
Q ss_pred -----EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 -----IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 -----~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
+.++|+++.++.|..+. ++|.++|+++
T Consensus 105 P~~~lid~~G~i~~~~~G~~~~----~~l~~~l~~l 136 (151)
T 2f9s_A 105 PTTFLINPEGKVVKVVTGTMTE----SMIHDYMNLI 136 (151)
T ss_dssp CEEEEECTTSEEEEEEESCCCH----HHHHHHHHHH
T ss_pred CeEEEECCCCcEEEEEeCCCCH----HHHHHHHHHH
Confidence 44899999999999887 6666666554
No 114
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.57 E-value=1.5e-14 Score=104.43 Aligned_cols=84 Identities=18% Similarity=0.293 Sum_probs=66.9
Q ss_pred CCCcEEEEEeCCCChhhhhh-hHHHHHHHHHhcC-CeEEEEEEcCC----------------------------ChH---
Q 030114 96 LSQPILIDWMASWCRKCIYL-KPKLEKLAAEFDT-KLKFYYVDVNK----------------------------VSK--- 142 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~-~p~l~~la~~~~~-~v~~~~vd~d~----------------------------~~~--- 142 (183)
.++++||+||++||++|+.+ .|.|.+++++|++ ++.++.|+++. ...
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 106 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAM 106 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSS
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchhh
Confidence 68999999999999999996 9999999999974 69999999741 110
Q ss_pred -HHHHhcCeE-------EeeCCeEEEEEecCcchhhHHHHHHHHH
Q 030114 143 -DLVKRGNIS-------IWKDGEMKSEVIGGHKAWLVIEEVREMI 179 (183)
Q Consensus 143 -~~~~~~~i~-------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i 179 (183)
.+++.|+|. +.++|+++.++.|..+.+.+.+.|.+++
T Consensus 107 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 151 (158)
T 3eyt_A 107 PRTMAAYQMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEIATLL 151 (158)
T ss_dssp CHHHHHTTCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHHh
Confidence 278888888 5589999999999998844444444443
No 115
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.57 E-value=1.8e-14 Score=104.48 Aligned_cols=83 Identities=18% Similarity=0.362 Sum_probs=67.2
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-eEEEEEEcCCChHHHHHhc--------------------------
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTK-LKFYYVDVNKVSKDLVKRG-------------------------- 148 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~-v~~~~vd~d~~~~~~~~~~-------------------------- 148 (183)
.++++||+||++||++|+.+.|.+.+++++++++ +.++.|+++..++ ..++|
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLP-NVKNYMKTQGIIYPVMMATPELIRAFNGYID 111 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHH-HHHHHHHHHTCCSCEEECCHHHHHHHHTTST
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHH-HHHHHHHHcCCCCceEecCHHHHHHHhhhhc
Confidence 6799999999999999999999999999999764 9999999998765 33333
Q ss_pred -CeE-------EeeCCeEEEEEecCcchhhHHHHHHHHH
Q 030114 149 -NIS-------IWKDGEMKSEVIGGHKAWLVIEEVREMI 179 (183)
Q Consensus 149 -~i~-------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i 179 (183)
++. +.++|+++.++.|..+.+.+.+.|.+.+
T Consensus 112 ~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l 150 (165)
T 3or5_A 112 GGITGIPTSFVIDASGNVSGVIVGPRSKADFDRIVKMAL 150 (165)
T ss_dssp TCSCSSSEEEEECTTSBEEEEECSCCCHHHHHHHHHHHH
T ss_pred cCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 565 5589999999999998844444444444
No 116
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.56 E-value=3.1e-14 Score=99.57 Aligned_cols=82 Identities=18% Similarity=0.330 Sum_probs=68.4
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCC----------------------hHHHHHhcCeE--
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKV----------------------SKDLVKRGNIS-- 151 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~----------------------~~~~~~~~~i~-- 151 (183)
.+++++|.||++||++|+.+.|.+.+++++++ ++.++.|+++.. ...+++.|+|.
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~ 102 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP-EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQ 102 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTCCSS
T ss_pred CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCCCCC
Confidence 67999999999999999999999999999996 899999999652 12377888887
Q ss_pred -----EeeCCeEEEEEecCcchhhHHHHHHHHHHhhC
Q 030114 152 -----IWKDGEMKSEVIGGHKAWLVIEEVREMIKKFV 183 (183)
Q Consensus 152 -----~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~l 183 (183)
+.++|+++ ++.|..+. ++|.++|++++
T Consensus 103 P~~~~id~~g~i~-~~~g~~~~----~~l~~~l~~~l 134 (136)
T 1zzo_A 103 PAYAFVDPHGNVD-VVRGRMSQ----DELTRRVTALT 134 (136)
T ss_dssp SEEEEECTTCCEE-EEESCCCH----HHHHHHHHHHC
T ss_pred ceEEEECCCCCEE-EEecCCCH----HHHHHHHHHHh
Confidence 33799999 99999887 67777776653
No 117
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.55 E-value=2.1e-14 Score=103.77 Aligned_cols=84 Identities=10% Similarity=0.248 Sum_probs=66.4
Q ss_pred CCCcEEEEEeCCCChhhhh-hhHHHHHHHHHhcCC-eEEEEEEcC------CC---------------------hHH---
Q 030114 96 LSQPILIDWMASWCRKCIY-LKPKLEKLAAEFDTK-LKFYYVDVN------KV---------------------SKD--- 143 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~-~~p~l~~la~~~~~~-v~~~~vd~d------~~---------------------~~~--- 143 (183)
.++++||+||++||++|+. +.|.+.+++++|+++ +.++.|+++ .. ...
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 108 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQR 108 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTCS
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccch
Confidence 6899999999999999999 599999999999754 999999873 11 112
Q ss_pred ---HHHhcCeE-------EeeCCeEEEEEecCcchhhHHHHHHHHH
Q 030114 144 ---LVKRGNIS-------IWKDGEMKSEVIGGHKAWLVIEEVREMI 179 (183)
Q Consensus 144 ---~~~~~~i~-------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i 179 (183)
+++.|+|. +.++|+++.++.|..+.+.+.+.|.+++
T Consensus 109 ~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 154 (160)
T 3lor_A 109 IPSTMKKYRLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLLGSLL 154 (160)
T ss_dssp SCHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHHHHHH
T ss_pred hhhHHHhcccCccceEEEECCCCcEEEEecCcCCHHHHHHHHHHHH
Confidence 77888887 5579999999999999844444444444
No 118
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.55 E-value=4.1e-14 Score=101.67 Aligned_cols=78 Identities=22% Similarity=0.421 Sum_probs=68.0
Q ss_pred CcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcC---------------------------CChHHHHHhcCe
Q 030114 98 QPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN---------------------------KVSKDLVKRGNI 150 (183)
Q Consensus 98 k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d---------------------------~~~~~~~~~~~i 150 (183)
++++|+||++||++|+.+.|.+.++++++ ++.++.|+++ ... .+++.|+|
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~v 107 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET--GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPH-EVAARFKV 107 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH--CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHH-HHHTTSSB
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc--CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchH-HHHHHhCC
Confidence 99999999999999999999999999999 7889999982 223 47888998
Q ss_pred E-------EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 151 S-------IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 151 ~-------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
. ++++|+++.++.|..+. ++|.++|+++
T Consensus 108 ~~~P~~~lid~~G~i~~~~~g~~~~----~~l~~~l~~~ 142 (154)
T 3ia1_A 108 LGQPWTFVVDREGKVVALFAGRAGR----EALLDALLLA 142 (154)
T ss_dssp CSSCEEEEECTTSEEEEEEESBCCH----HHHHHHHHHT
T ss_pred CcccEEEEECCCCCEEEEEcCCCCH----HHHHHHHHhc
Confidence 7 55899999999999888 7888888765
No 119
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.54 E-value=4.7e-14 Score=109.91 Aligned_cols=80 Identities=14% Similarity=0.120 Sum_probs=67.7
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhc----CCeEEEEEEcCCChHHHHHhcCeE----EeeCCeEEEEEecCcc
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFD----TKLKFYYVDVNKVSKDLVKRGNIS----IWKDGEMKSEVIGGHK 167 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~----~~v~~~~vd~d~~~~~~~~~~~i~----~~~~Gk~v~~~~G~~~ 167 (183)
.++.+++.||||||++|+.+.|.|++++..+. +++.+..||++.+++ ++++|+|. ++-||+++ +.|..+
T Consensus 137 ~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~~-~~~~~~V~~vPt~~i~G~~~--~~G~~~ 213 (243)
T 2hls_A 137 KGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENPD-IADKYGVMSVPSIAINGYLV--FVGVPY 213 (243)
T ss_dssp CSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCHH-HHHHTTCCSSSEEEETTEEE--EESCCC
T ss_pred CCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCHH-HHHHcCCeeeCeEEECCEEE--EeCCCC
Confidence 46778999999999999999999999999983 679999999999987 89999998 44499864 889998
Q ss_pred hhhHHHHHHHHHHhh
Q 030114 168 AWLVIEEVREMIKKF 182 (183)
Q Consensus 168 ~~~~~~~l~~~i~~~ 182 (183)
. ++|.++|++.
T Consensus 214 ~----~~l~~~l~~~ 224 (243)
T 2hls_A 214 E----EDFLDYVKSA 224 (243)
T ss_dssp H----HHHHHHHHHH
T ss_pred H----HHHHHHHHHH
Confidence 8 6666666543
No 120
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.54 E-value=1.4e-14 Score=122.66 Aligned_cols=92 Identities=16% Similarity=0.389 Sum_probs=78.8
Q ss_pred CchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcC--CeEEEEEEcCCChHHHHHhcCeE------Ee
Q 030114 82 DSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT--KLKFYYVDVNKVSKDLVKRGNIS------IW 153 (183)
Q Consensus 82 ~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~--~v~~~~vd~d~~~~~~~~~~~i~------~~ 153 (183)
+.++|++.+. ..+++++|+|||+||++|+.+.|.|+++++.+++ ++.++.+|++.+ + ++++|+|. ++
T Consensus 358 ~~~~~~~~~~---~~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~~-~-~~~~~~v~~~Pt~~~~ 432 (481)
T 3f8u_A 358 VAENFDEIVN---NENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAN-D-VPSPYEVRGFPTIYFS 432 (481)
T ss_dssp CTTTHHHHHT---CTTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTSS-C-CCTTCCCCSSSEEEEE
T ss_pred cccCHHHHhh---cCCCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCch-h-hHhhCCCcccCEEEEE
Confidence 4667888873 3589999999999999999999999999999976 699999999988 4 78899998 66
Q ss_pred eCCeE--EEEEecCcchhhHHHHHHHHHHhh
Q 030114 154 KDGEM--KSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 154 ~~Gk~--v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
++|+. +.++.|..+. +.|.++|+++
T Consensus 433 ~~~~~~~~~~~~G~~~~----~~l~~~l~~~ 459 (481)
T 3f8u_A 433 PANKKLNPKKYEGGREL----SDFISYLQRE 459 (481)
T ss_dssp CTTCTTSCEECCSCCSH----HHHHHHHHHH
T ss_pred eCCCeEeeeEeCCCCCH----HHHHHHHHHh
Confidence 77765 6889999888 8888888765
No 121
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.53 E-value=6.3e-14 Score=97.83 Aligned_cols=82 Identities=20% Similarity=0.361 Sum_probs=69.2
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcC----------------------------CChHHHHHh
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN----------------------------KVSKDLVKR 147 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d----------------------------~~~~~~~~~ 147 (183)
.+++++|+||++||++|+.+.|.+.++++++++++.++.++.+ .... +++.
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~ 99 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGK-LLET 99 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCH-HHHH
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchH-HHHH
Confidence 6899999999999999999999999999998778999999542 2233 7888
Q ss_pred cCeE-------EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 148 GNIS-------IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 148 ~~i~-------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
|++. +.++|+++.++.|..+. +++.++|++.
T Consensus 100 ~~v~~~P~~~lid~~G~i~~~~~g~~~~----~~l~~~l~~l 137 (138)
T 4evm_A 100 YGVRSYPTQAFIDKEGKLVKTHPGFMEK----DAILQTLKEL 137 (138)
T ss_dssp TTCCSSSEEEEECTTCCEEEEEESCCCH----HHHHHHHHHC
T ss_pred cCcccCCeEEEECCCCcEEEeecCCCcH----HHHHHHHHhh
Confidence 8887 44899999999999888 7788877653
No 122
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.53 E-value=5.4e-15 Score=101.22 Aligned_cols=72 Identities=18% Similarity=0.210 Sum_probs=58.3
Q ss_pred hCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcC------CChHHHHHhcCeE----EeeCCeEEEEEec
Q 030114 95 ELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN------KVSKDLVKRGNIS----IWKDGEMKSEVIG 164 (183)
Q Consensus 95 ~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d------~~~~~~~~~~~i~----~~~~Gk~v~~~~G 164 (183)
..+++++|+|||+||++|+.+.|.|++++++++ .||++ +.++ ++++|+|+ ++.+|+. +.|
T Consensus 10 ~~~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~------~v~~~~~~~~~~~~~-l~~~~~V~~~PT~~i~G~~---~~G 79 (106)
T 3kp8_A 10 HLRQIGGTMYGAYWCPHCQDQKELFGAAFDQVP------YVECSPNGPGTPQAQ-ECTEAGITSYPTWIINGRT---YTG 79 (106)
T ss_dssp HHHHHTCEEEECTTCHHHHHHHHHHGGGGGGSC------EEESCTTCTTSCCCH-HHHHTTCCSSSEEEETTEE---EES
T ss_pred hcCCCEEEEEECCCCHHHHHHHHHHHHHHHhCC------EEEEecccccchhHH-HHHHcCCeEeCEEEECCEE---ecC
Confidence 457888999999999999999999999997773 45555 4555 99999999 3339974 789
Q ss_pred CcchhhHHHHHHHHHH
Q 030114 165 GHKAWLVIEEVREMIK 180 (183)
Q Consensus 165 ~~~~~~~~~~l~~~i~ 180 (183)
..+. ++|.+++.
T Consensus 80 ~~~~----~~l~~~~~ 91 (106)
T 3kp8_A 80 VRSL----EALAVASG 91 (106)
T ss_dssp CCCH----HHHHHHHT
T ss_pred CCCH----HHHHHHhC
Confidence 9888 88888764
No 123
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.53 E-value=1.9e-14 Score=117.56 Aligned_cols=95 Identities=12% Similarity=0.370 Sum_probs=79.0
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcC--CeEEEEEEcCCChHHHHHhcCeE---
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT--KLKFYYVDVNKVSKDLVKRGNIS--- 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~--~v~~~~vd~d~~~~~~~~~~~i~--- 151 (183)
+..+ +.++|++.+. ..+++++|+||||||++|+.+.|.|+++++.+++ ++.++.+|++.+. +++|+|.
T Consensus 251 v~~l-~~~~f~~~~~---~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~---~~~~~v~~~P 323 (361)
T 3uem_A 251 VKVL-VGKNFEDVAF---DEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANE---VEAVKVHSFP 323 (361)
T ss_dssp SEEE-CTTTHHHHHT---CTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCB---CSSCCCCSSS
T ss_pred cEEe-ecCchhhhcc---cCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccc---hhhcCCcccC
Confidence 4445 4567888773 4789999999999999999999999999999965 4999999999886 6788888
Q ss_pred ---EeeCC--eEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 ---IWKDG--EMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 ---~~~~G--k~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
++.+| +.+.++.|..+. +.|.+||+++
T Consensus 324 t~~~~~~~~~~~~~~~~G~~~~----~~l~~~l~~~ 355 (361)
T 3uem_A 324 TLKFFPASADRTVIDYNGERTL----DGFKKFLESG 355 (361)
T ss_dssp EEEEECSSSSCCCEECCSCSSH----HHHHHHHTTT
T ss_pred eEEEEECCCCcceeEecCCCCH----HHHHHHHHhc
Confidence 66454 677889999888 8999998764
No 124
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.53 E-value=2.9e-14 Score=91.02 Aligned_cols=70 Identities=19% Similarity=0.371 Sum_probs=58.6
Q ss_pred EEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE----EeeCCeEEEEEecCc-chhhHHHH
Q 030114 100 ILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS----IWKDGEMKSEVIGGH-KAWLVIEE 174 (183)
Q Consensus 100 vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~----~~~~Gk~v~~~~G~~-~~~~~~~~ 174 (183)
..|+||++||++|+.+.|.++++++++++++.++.+| +++ ++++|+|. ++-||+++.+ |.. +. ++
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~---~~~-~~~~~~v~~~Pt~~~~G~~~~~--G~~~~~----~~ 71 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIK---EMD-QILEAGLTALPGLAVDGELKIM--GRVASK----EE 71 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTCCEEEEEEC---SHH-HHHHHTCSSSSCEEETTEEEEC--SSCCCH----HH
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCCceEEEEec---CHH-HHHHCCCCcCCEEEECCEEEEc--CCCCCH----HH
Confidence 3689999999999999999999999997789999998 555 89999998 3339998776 886 66 77
Q ss_pred HHHHH
Q 030114 175 VREMI 179 (183)
Q Consensus 175 l~~~i 179 (183)
|.++|
T Consensus 72 l~~~l 76 (77)
T 1ilo_A 72 IKKIL 76 (77)
T ss_dssp HHHHC
T ss_pred HHHHh
Confidence 77664
No 125
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.53 E-value=2.2e-14 Score=102.83 Aligned_cols=83 Identities=22% Similarity=0.380 Sum_probs=70.0
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcC-CeEEEEEEcCCChH----------------------HHHHhcCeE-
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNKVSK----------------------DLVKRGNIS- 151 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~d~~~~----------------------~~~~~~~i~- 151 (183)
.+++++|.||++||++|+.+.|.+.++++++++ ++.++.|+++...+ .+++.|+|.
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 108 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLING 108 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCS
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcCC
Confidence 679999999999999999999999999999965 59999999988751 378888887
Q ss_pred ------EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 ------IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 ------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
+.++|+++.+..|..+. ++|.++|+++
T Consensus 109 ~P~~~lid~~G~i~~~~~g~~~~----~~l~~~l~~~ 141 (152)
T 2lja_A 109 IPRFILLDRDGKIISANMTRPSD----PKTAEKFNEL 141 (152)
T ss_dssp SCCEEEECTTSCEEESSCCCTTC----HHHHHHHHHH
T ss_pred CCEEEEECCCCeEEEccCCCCCH----HHHHHHHHHH
Confidence 44689999999998887 6666666653
No 126
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.52 E-value=4e-14 Score=100.72 Aligned_cols=79 Identities=11% Similarity=0.082 Sum_probs=65.7
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHH---HHHHhc-CCeEEEEEEcCCChHH-----------------------HHHhc
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEK---LAAEFD-TKLKFYYVDVNKVSKD-----------------------LVKRG 148 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~---la~~~~-~~v~~~~vd~d~~~~~-----------------------~~~~~ 148 (183)
.+++++|+|||+||++|+.+.|.+.+ ++++++ .++.++.|+.+...+. +.+.|
T Consensus 30 ~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 109 (142)
T 3eur_A 30 PAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLY 109 (142)
T ss_dssp CCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhc
Confidence 57999999999999999999999999 999985 4699999999987542 35567
Q ss_pred CeE-------EeeCCeEEEEEecCcchhhHHHHHHHHHHh
Q 030114 149 NIS-------IWKDGEMKSEVIGGHKAWLVIEEVREMIKK 181 (183)
Q Consensus 149 ~i~-------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~ 181 (183)
+|. +.++|+++.+..|. ++|+++|++
T Consensus 110 ~v~~~P~~~lid~~G~i~~~~~~~-------~~l~~~l~e 142 (142)
T 3eur_A 110 DLRAIPTLYLLDKNKTVLLKDATL-------QKVEQYLAE 142 (142)
T ss_dssp CCTTCSEEEEECTTCBEEEEEECH-------HHHHHHHHC
T ss_pred CCCcCCeEEEECCCCcEEecCCCH-------HHHHHHHhC
Confidence 766 66899999988763 788888764
No 127
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.52 E-value=1.1e-14 Score=105.69 Aligned_cols=83 Identities=27% Similarity=0.412 Sum_probs=67.6
Q ss_pred hCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhc-CCeEEEEEEcC----------------------------CChHHHH
Q 030114 95 ELSQPILIDWMASWCRKCIYLKPKLEKLAAEFD-TKLKFYYVDVN----------------------------KVSKDLV 145 (183)
Q Consensus 95 ~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~-~~v~~~~vd~d----------------------------~~~~~~~ 145 (183)
..+++++|+||++||++|+.+.|.|++++++|+ .++.++.|+++ ... .++
T Consensus 36 ~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~ 114 (164)
T 2h30_A 36 KKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYPKLPVVTDNGG-TIA 114 (164)
T ss_dssp CTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCTTSCEEECTTC-HHH
T ss_pred hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCCcceEEEcCch-HHH
Confidence 468999999999999999999999999999874 45777777653 222 378
Q ss_pred HhcCeE-------EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 146 KRGNIS-------IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 146 ~~~~i~-------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
+.|+|. +.++|+++.++.|..+. ++|.++|++.
T Consensus 115 ~~~~v~~~P~~~lid~~G~i~~~~~g~~~~----~~l~~~i~~~ 154 (164)
T 2h30_A 115 QNLNISVYPSWALIGKDGDVQRIVKGSINE----AQALALIRNP 154 (164)
T ss_dssp HHTTCCSSSEEEEECTTSCEEEEEESCCCH----HHHHHHHHCT
T ss_pred HHcCCCccceEEEECCCCcEEEEEcCCCCH----HHHHHHHHHH
Confidence 888887 44899999999999887 7788877764
No 128
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.52 E-value=2.8e-14 Score=105.89 Aligned_cols=74 Identities=12% Similarity=0.156 Sum_probs=59.3
Q ss_pred chhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHH-H--HHHHHHhcCCeEEEEEEcCCChHHHHHhc--------CeE
Q 030114 83 SDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPK-L--EKLAAEFDTKLKFYYVDVNKVSKDLVKRG--------NIS 151 (183)
Q Consensus 83 ~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~-l--~~la~~~~~~v~~~~vd~d~~~~~~~~~~--------~i~ 151 (183)
.+.|..+. ..+++|+|+|||+||++|+.|.|. | .++++.+++++.+++||.++.++ +.+.| ++.
T Consensus 29 ~ea~~~A~----~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de~~~-l~~~y~~~~q~~~gv~ 103 (173)
T 3ira_A 29 EEAFEKAR----KENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREERPD-IDNIYMTVCQIILGRG 103 (173)
T ss_dssp HHHHHHHH----HHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTCHH-HHHHHHHHHHHHHSCC
T ss_pred HHHHHHHH----HhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCcccCc-HHHHHHHHHHHHcCCC
Confidence 34455554 689999999999999999999993 3 57777776679999999999987 77777 666
Q ss_pred ------Ee-eCCeEEEE
Q 030114 152 ------IW-KDGEMKSE 161 (183)
Q Consensus 152 ------~~-~~Gk~v~~ 161 (183)
|+ .+|+++..
T Consensus 104 g~Pt~v~l~~dG~~v~~ 120 (173)
T 3ira_A 104 GWPLNIIMTPGKKPFFA 120 (173)
T ss_dssp CSSEEEEECTTSCEEEE
T ss_pred CCcceeeECCCCCceee
Confidence 44 58998875
No 129
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.51 E-value=5.4e-14 Score=104.25 Aligned_cols=84 Identities=12% Similarity=0.197 Sum_probs=65.1
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-e------EEEEEEcCC-ChHHHHHhc-------------------
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTK-L------KFYYVDVNK-VSKDLVKRG------------------- 148 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~-v------~~~~vd~d~-~~~~~~~~~------------------- 148 (183)
.++++||+||++||++|+.+.|.|.+++++|+++ + .|+.|+++. .++ ..++|
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~-~~~~~~~~~~~~~~~~~d~~~~~~ 136 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRD-IAQDFVTDNGLDYPSIYDPPFMTA 136 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHH-HHHHHHHHTTCCSCEEECTTCGGG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHH-HHHHHHHHcCCCccEEECCcchHH
Confidence 6899999999999999999999999999998654 7 999999998 554 23332
Q ss_pred ------CeE-------EeeCCeEEEEEecCcchhhHHHHHHHHHH
Q 030114 149 ------NIS-------IWKDGEMKSEVIGGHKAWLVIEEVREMIK 180 (183)
Q Consensus 149 ------~i~-------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~ 180 (183)
++. ++++|+++.++.|..+.+.+.+.|.++++
T Consensus 137 ~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 181 (183)
T 3lwa_A 137 ASLGGVPASVIPTTIVLDKQHRPAAVFLREVTSKDVLDVALPLVD 181 (183)
T ss_dssp GGTTTCCTTCCSEEEEECTTSCEEEEECSCCCHHHHHHHHHHHHH
T ss_pred HHhccCCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHh
Confidence 233 66899999999999888444444444443
No 130
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.51 E-value=1.3e-13 Score=98.69 Aligned_cols=85 Identities=19% Similarity=0.349 Sum_probs=70.0
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-eEEEEEEcCCChH---------------------HHHHhcCeE--
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTK-LKFYYVDVNKVSK---------------------DLVKRGNIS-- 151 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~-v~~~~vd~d~~~~---------------------~~~~~~~i~-- 151 (183)
.+++++|+||++||++|+.+.|.|.++++++.++ +.++.|+++..++ .+++.|+|.
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 106 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKGM 106 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCCC
Confidence 6899999999999999999999999999999664 9999999997652 366778887
Q ss_pred -----EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 -----IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 -----~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
+.++|+++.++.|..+. ..++|+++|+++
T Consensus 107 P~~~lid~~G~i~~~~~g~~~~--~~~~l~~~i~~~ 140 (152)
T 3gl3_A 107 PTSFLIDRNGKVLLQHVGFRPA--DKEALEQQILAA 140 (152)
T ss_dssp SEEEEECTTSBEEEEEESCCTT--THHHHHHHHHHH
T ss_pred CeEEEECCCCCEEEEEccCCCc--CHHHHHHHHHHH
Confidence 55899999999997653 225677777654
No 131
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.51 E-value=4e-14 Score=103.36 Aligned_cols=81 Identities=19% Similarity=0.324 Sum_probs=65.0
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCC-----------------------ChHHHHHhcCeE-
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNK-----------------------VSKDLVKRGNIS- 151 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~-----------------------~~~~~~~~~~i~- 151 (183)
.+++++|+||++||++|+.+.|.+++++++ ++.++.|+++. ... +++.|+|.
T Consensus 50 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~v~~ 125 (168)
T 2b1k_A 50 QGKPVLLNVWATWCPTCRAEHQYLNQLSAQ---GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGM-LGLDLGVYG 125 (168)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCH-HHHHHTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHC---CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchH-HHHHcCccc
Confidence 789999999999999999999999999876 58888888543 333 77788876
Q ss_pred ------EeeCCeEEEEEecCcchhhHHHHHHHHHH
Q 030114 152 ------IWKDGEMKSEVIGGHKAWLVIEEVREMIK 180 (183)
Q Consensus 152 ------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~ 180 (183)
++++|+++.++.|..+.+.+.+.|.+.++
T Consensus 126 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 160 (168)
T 2b1k_A 126 APETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLWE 160 (168)
T ss_dssp SSEEEEECTTSBEEEEEESCCCHHHHHHTTHHHHH
T ss_pred cCEEEEECCCCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence 66899999999999888555555555544
No 132
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.51 E-value=9.3e-14 Score=108.63 Aligned_cols=91 Identities=10% Similarity=0.147 Sum_probs=76.7
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEe--CCCChhhhhhhHHHHHHHHHhc---CCeEEEEEEcCC-----ChHHHHH
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWM--ASWCRKCIYLKPKLEKLAAEFD---TKLKFYYVDVNK-----VSKDLVK 146 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~--a~wC~~C~~~~p~l~~la~~~~---~~v~~~~vd~d~-----~~~~~~~ 146 (183)
+..+ +.++|++++ ..+++|||+|| ||||+ +.|.|+++++++. +++.|++||++. +++ +++
T Consensus 18 v~~L-t~~nF~~vi----~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~-la~ 87 (248)
T 2c0g_A 18 CVDL-DELSFEKTV----ERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKA-LGD 87 (248)
T ss_dssp CEEC-CTTTHHHHH----TTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHH-HHH
T ss_pred cEEC-CHHHHHHHH----hcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHH-HHH
Confidence 4455 467899987 67899999999 99999 9999999999983 579999999998 666 999
Q ss_pred hcCeE--------EeeCCeE--EEEE--ecCcchhhHHHHHHHHHHhh
Q 030114 147 RGNIS--------IWKDGEM--KSEV--IGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 147 ~~~i~--------~~~~Gk~--v~~~--~G~~~~~~~~~~l~~~i~~~ 182 (183)
+|+|+ +|+ |+. ..++ .|..+. +.|.+||+++
T Consensus 88 ~~~V~~~~~PTl~~F~-G~~~~~~~y~~~G~~~~----~~L~~fi~~~ 130 (248)
T 2c0g_A 88 RYKVDDKNFPSIFLFK-GNADEYVQLPSHVDVTL----DNLKAFVSAN 130 (248)
T ss_dssp HTTCCTTSCCEEEEES-SSSSSEEECCTTSCCCH----HHHHHHHHHH
T ss_pred HhCCCcCCCCeEEEEe-CCcCcceeecccCCCCH----HHHHHHHHHh
Confidence 99888 788 873 5667 898887 8888888765
No 133
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.51 E-value=6.6e-14 Score=100.67 Aligned_cols=81 Identities=20% Similarity=0.306 Sum_probs=64.0
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-eEEEEEEcCCC------------------------hHHHHHhcCe
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTK-LKFYYVDVNKV------------------------SKDLVKRGNI 150 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~-v~~~~vd~d~~------------------------~~~~~~~~~i 150 (183)
.+++++|+||++||++|+.+.|.+.+++++++++ +.++.|+++.. ...+++.|+|
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 107 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCI 107 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCC
Confidence 6799999999999999999999999999999764 99999999974 2348889998
Q ss_pred E-------EeeCCeEEEEEecCcchhhHHHHHHHHH
Q 030114 151 S-------IWKDGEMKSEVIGGHKAWLVIEEVREMI 179 (183)
Q Consensus 151 ~-------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i 179 (183)
. +.++|+++.+..+ .+.+.+.|++++
T Consensus 108 ~~~P~~~lid~~G~i~~~~~~---~~~l~~~l~~l~ 140 (152)
T 2lrn_A 108 VGFPHIILVDPEGKIVAKELR---GDDLYNTVEKFV 140 (152)
T ss_dssp CSSCEEEEECTTSEEEEECCC---TTHHHHHHHHHH
T ss_pred CcCCeEEEECCCCeEEEeeCC---HHHHHHHHHHHH
Confidence 7 4489999888643 323344444444
No 134
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.50 E-value=3.1e-14 Score=127.07 Aligned_cols=97 Identities=15% Similarity=0.269 Sum_probs=81.4
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE-----
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS----- 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~----- 151 (183)
+.+++ .++|.+.+. ..+++++|+|||+||++|+.+.|.++++++++++++.|+.||+++++. ++++|+|.
T Consensus 659 v~~l~-~~~~~~~~~---~~~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~vd~~~~~~-~~~~~~v~~~Pt~ 733 (780)
T 3apo_A 659 SIDLT-PQTFNEKVL---QGKTHWVVDFYAPWSGPSQNFAPEFELLARMIKGKVRAGKVDCQAYPQ-TCQKAGIKAYPSV 733 (780)
T ss_dssp SEEEC-HHHHHHHTT---TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHH-HHHHTTCCSSSEE
T ss_pred cccCC-HHHHHHHHh---cCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCceEEEEECCCCHH-HHHhcCCCcCCEE
Confidence 44554 567766542 578999999999999999999999999999998889999999999988 99999998
Q ss_pred -EeeCCeEEEEEecC----cchhhHHHHHHHHHHhh
Q 030114 152 -IWKDGEMKSEVIGG----HKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 -~~~~Gk~v~~~~G~----~~~~~~~~~l~~~i~~~ 182 (183)
++++|+++.++.|. .+. ++|.++|+++
T Consensus 734 ~~~~~g~~~~~~~G~~~g~~~~----~~l~~~l~~~ 765 (780)
T 3apo_A 734 KLYQYERAKKSIWEEQINSRDA----KTIAALIYGK 765 (780)
T ss_dssp EEEEEETTTTEEEEEEECCCCH----HHHHHHHHHH
T ss_pred EEEcCCCccccccCcccCCcCH----HHHHHHHHHH
Confidence 77899988888884 466 6777777665
No 135
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.50 E-value=3.4e-14 Score=93.85 Aligned_cols=69 Identities=16% Similarity=0.146 Sum_probs=58.6
Q ss_pred EEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE---Ee-eCCeEEEEEecCcchhhHHHHHH
Q 030114 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS---IW-KDGEMKSEVIGGHKAWLVIEEVR 176 (183)
Q Consensus 101 lv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~---~~-~~Gk~v~~~~G~~~~~~~~~~l~ 176 (183)
++.||++||++|+.+.|.|++++.++ +.+||++++++ ++++|+++ ++ .||+.+. |..+. ++|+
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~-----~~~vdid~~~~-l~~~~g~~vPtl~~~~G~~v~---g~~~~----~~L~ 69 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA-----FFSVFIDDDAA-LESAYGLRVPVLRDPMGRELD---WPFDA----PRLR 69 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC-----EEEEECTTCHH-HHHHHTTTCSEEECTTCCEEE---SCCCH----HHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh-----eEEEECCCCHH-HHHHhCCCcCeEEEECCEEEe---CCCCH----HHHH
Confidence 78899999999999999999887554 68899999998 89999988 55 8999874 77777 7888
Q ss_pred HHHHhh
Q 030114 177 EMIKKF 182 (183)
Q Consensus 177 ~~i~~~ 182 (183)
++|+++
T Consensus 70 ~~l~~~ 75 (87)
T 1ttz_A 70 AWLDAA 75 (87)
T ss_dssp HHHHTC
T ss_pred HHHHHH
Confidence 888765
No 136
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.49 E-value=8.6e-14 Score=98.90 Aligned_cols=80 Identities=19% Similarity=0.367 Sum_probs=65.7
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHh-cCC-eEEEEEEcCCCh------------------------HHHHHhcC
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEF-DTK-LKFYYVDVNKVS------------------------KDLVKRGN 149 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~-~~~-v~~~~vd~d~~~------------------------~~~~~~~~ 149 (183)
.+++++|+||++||++|+.+.|.+.++++++ +++ +.++.|+++..+ ..+++.|+
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 111 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYA 111 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcC
Confidence 6899999999999999999999999999999 664 999999998754 13788999
Q ss_pred eE-------EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 150 IS-------IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 150 i~-------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
|. +.++|+++.+.. +. +++.+.|+++
T Consensus 112 v~~~P~~~lid~~G~i~~~~~---~~----~~l~~~l~~l 144 (148)
T 3fkf_A 112 ILTLPTNILLSPTGKILARDI---QG----EALTGKLKEL 144 (148)
T ss_dssp CCSSSEEEEECTTSBEEEESC---CH----HHHHHHHHHH
T ss_pred CCCcCEEEEECCCCeEEEecC---CH----HHHHHHHHHH
Confidence 88 448999988776 44 5566666554
No 137
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.49 E-value=1.1e-13 Score=98.49 Aligned_cols=79 Identities=16% Similarity=0.310 Sum_probs=64.7
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcC-CeEEEEEEcCCChH-------------------------HHHHhcC
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNKVSK-------------------------DLVKRGN 149 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~d~~~~-------------------------~~~~~~~ 149 (183)
.+++++|+||++||++|+.+.|.|.+++++|++ ++.++.|++|..++ .+++.|+
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 110 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYD 110 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcC
Confidence 679999999999999999999999999999964 59999999986531 3667787
Q ss_pred eE-------EeeCCeEEEEEecCcchhhHHHHHHHHHHh
Q 030114 150 IS-------IWKDGEMKSEVIGGHKAWLVIEEVREMIKK 181 (183)
Q Consensus 150 i~-------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~ 181 (183)
|. +.++|+++.+..+. +++++.|++
T Consensus 111 v~~~P~~~lid~~G~i~~~~~~~-------~~l~~~l~~ 142 (143)
T 4fo5_A 111 LRKGFKNFLINDEGVIIAANVTP-------EKLTEILKA 142 (143)
T ss_dssp GGGCCCEEEECTTSBEEEESCCH-------HHHHHHHTC
T ss_pred CCCCCcEEEECCCCEEEEccCCH-------HHHHHHHHh
Confidence 76 66789998876543 677777764
No 138
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.49 E-value=3e-14 Score=108.93 Aligned_cols=95 Identities=22% Similarity=0.310 Sum_probs=73.9
Q ss_pred cCCchhHHHHHHHhhhCCCcEEEEEeCC-CChhhhhhhHHHHHHHHHhcCCeEEEEEEcCC--ChHHHHHhcCeE-----
Q 030114 80 INDSDHLDQILLRAQELSQPILIDWMAS-WCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNK--VSKDLVKRGNIS----- 151 (183)
Q Consensus 80 i~~~~~~~~~l~~a~~~~k~vlv~F~a~-wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~--~~~~~~~~~~i~----- 151 (183)
..+.+++.+.+... ..++.+++.||++ ||++|+.+.|.++++++. .+++.|+.||+++ +++ ++++|+|.
T Consensus 6 ~~~~~~~~~~~~~~-~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~~~v~~~~vd~~~~~~~~-~~~~~~v~~~Pt~ 82 (226)
T 1a8l_A 6 DADKKVIKEEFFSK-MVNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-TDKLSYEIVDFDTPEGKE-LAKRYRIDRAPAT 82 (226)
T ss_dssp HHHHHHHHHHTGGG-CCSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-CTTEEEEEEETTSHHHHH-HHHHTTCCSSSEE
T ss_pred HHHHHHHHHHHHHh-cCCCeEEEEEecCCCCchhHHHHHHHHHHHhh-CCceEEEEEeCCCcccHH-HHHHcCCCcCceE
Confidence 33455666666111 2456678999999 999999999999999965 4789999999998 776 99999999
Q ss_pred -EeeCCeEE-EEEecCcchhhHHHHHHHHHHh
Q 030114 152 -IWKDGEMK-SEVIGGHKAWLVIEEVREMIKK 181 (183)
Q Consensus 152 -~~~~Gk~v-~~~~G~~~~~~~~~~l~~~i~~ 181 (183)
++++|+.. .++.|..+. +++.++++.
T Consensus 83 ~~~~~g~~~~~~~~G~~~~----~~l~~~l~~ 110 (226)
T 1a8l_A 83 TITQDGKDFGVRYFGLPAG----HEFAAFLED 110 (226)
T ss_dssp EEEETTBCCSEEEESCCCT----THHHHHHHH
T ss_pred EEEcCCceeeEEEeccCcH----HHHHHHHHH
Confidence 77899875 788998887 555555543
No 139
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.49 E-value=1.3e-13 Score=99.01 Aligned_cols=85 Identities=14% Similarity=0.259 Sum_probs=68.4
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChH----------------------HHHHhcCeE--
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSK----------------------DLVKRGNIS-- 151 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~----------------------~~~~~~~i~-- 151 (183)
.+++++|+||++||++|+.+.|.|++++++ +++.++.|+++..++ .+++.|+|.
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 118 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGKD--KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYGV 118 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTC--TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCCSS
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHhc--CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcCcc
Confidence 589999999999999999999999999876 669999998764321 367788886
Q ss_pred -----EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 -----IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 -----~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
++++|+++.++.|..+.+.+.+.|.+.+++.
T Consensus 119 P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~~l~~~ 154 (156)
T 1kng_A 119 PETFVVGREGTIVYKLVGPITPDNLRSVLLPQMEKA 154 (156)
T ss_dssp CEEEEECTTSBEEEEEESCCCHHHHHHTHHHHHHHH
T ss_pred CeEEEEcCCCCEEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 5589999999999988855556666665543
No 140
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.49 E-value=2.8e-14 Score=120.42 Aligned_cols=87 Identities=13% Similarity=0.204 Sum_probs=68.2
Q ss_pred ceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhc---C-----CeEEEEEEcCCChHHHHHh
Q 030114 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFD---T-----KLKFYYVDVNKVSKDLVKR 147 (183)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~---~-----~v~~~~vd~d~~~~~~~~~ 147 (183)
.+.+++ .++|++++.. ..+++|||+|||+||++|+.+.|.|+++++++. + ++.|++||++++++ ++++
T Consensus 24 ~V~~Lt-~~~F~~~l~~--~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~-la~~ 99 (470)
T 3qcp_A 24 SVVDLS-GDDFSRVHRV--APLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVD-LCRK 99 (470)
T ss_dssp TEEECS-CSCGGGTCTT--GGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHH-HHHH
T ss_pred CcEECC-HHHHHHHHHh--CCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHH-HHHH
Confidence 456664 5678887732 245899999999999999999999999999986 2 59999999999987 9999
Q ss_pred cCeE------EeeCCe--EEEEEecCc
Q 030114 148 GNIS------IWKDGE--MKSEVIGGH 166 (183)
Q Consensus 148 ~~i~------~~~~Gk--~v~~~~G~~ 166 (183)
|+|. +|++|+ .+.++.|..
T Consensus 100 y~V~~~PTlilf~~gg~~~~~~y~G~r 126 (470)
T 3qcp_A 100 YDINFVPRLFFFYPRDSCRSNEECGTS 126 (470)
T ss_dssp TTCCSSCEEEEEEESSCCCTTSCCCCC
T ss_pred cCCCccCeEEEEECCCceEEEEeeCCC
Confidence 9998 565443 244455543
No 141
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.49 E-value=2.7e-13 Score=97.25 Aligned_cols=84 Identities=19% Similarity=0.353 Sum_probs=68.8
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcC-CeEEEEEEcCCCh-H---------------------HHHHhcCeE-
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNKVS-K---------------------DLVKRGNIS- 151 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~d~~~-~---------------------~~~~~~~i~- 151 (183)
.+++++|+||++||++|+.+.|.+.++++++.+ ++.++.|+++... + .+++.|++.
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTTG 106 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCCC
Confidence 679999999999999999999999999999976 6999999999862 1 267778877
Q ss_pred ------EeeCCeEEEEEecCcchhhHHHHHHHHHHh
Q 030114 152 ------IWKDGEMKSEVIGGHKAWLVIEEVREMIKK 181 (183)
Q Consensus 152 ------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~ 181 (183)
++++|+++.++.|..+.. .+++.++|++
T Consensus 107 ~P~~~lid~~G~i~~~~~g~~~~~--~~~l~~~l~~ 140 (154)
T 3kcm_A 107 VPETFVIDRHGVILKKVVGAMEWD--HPEVIAFLNN 140 (154)
T ss_dssp BCEEEEECTTSBEEEEEESCCCTT--SHHHHHHHHT
T ss_pred CCeEEEECCCCcEEEEEcCCCccc--cHHHHHHHHH
Confidence 668999999999986321 1566666654
No 142
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.49 E-value=1.8e-13 Score=98.09 Aligned_cols=84 Identities=18% Similarity=0.252 Sum_probs=66.9
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcC-CeEEEEEEcC-----------------------CChHHHHHhcCeE
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVN-----------------------KVSKDLVKRGNIS 151 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~d-----------------------~~~~~~~~~~~i~ 151 (183)
.+++++|.||++||++|+.+.|.+.++++++++ ++.++.|+.+ .... +++.|+|.
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~i~ 105 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKA-VGQAFGTQ 105 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCH-HHHHHTCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHH-HHHHcCCC
Confidence 689999999999999999999999999999965 4889888753 2333 78888887
Q ss_pred -------EeeCCeEEEEEecCcchhhHHHHHHHHHH
Q 030114 152 -------IWKDGEMKSEVIGGHKAWLVIEEVREMIK 180 (183)
Q Consensus 152 -------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~ 180 (183)
+.++|+++.++.|..+.+.+.+.|.++++
T Consensus 106 ~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 141 (153)
T 2l5o_A 106 VYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAWR 141 (153)
T ss_dssp SSSEEEEECSSSCCCEEEESSCCHHHHHHHHHHHHH
T ss_pred ccCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 44899999999999888444455554443
No 143
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.48 E-value=8.3e-14 Score=98.99 Aligned_cols=84 Identities=14% Similarity=0.192 Sum_probs=68.5
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-eEEEEEEcCCChHH------------------------HHHhcCe
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTK-LKFYYVDVNKVSKD------------------------LVKRGNI 150 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~-v~~~~vd~d~~~~~------------------------~~~~~~i 150 (183)
.+++++|+||++||++|+.+.|.+.+++++++++ +.++.|+++..++. +++.|+|
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i 109 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYDI 109 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcCc
Confidence 6899999999999999999999999999999664 99999999966531 6778887
Q ss_pred E-------EeeCCeEEEEEecCcchhhHHHHHHHHH
Q 030114 151 S-------IWKDGEMKSEVIGGHKAWLVIEEVREMI 179 (183)
Q Consensus 151 ~-------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i 179 (183)
. +.++|+++.+..|....+.+.+.+.+.+
T Consensus 110 ~~~P~~~lid~~G~i~~~~~g~~~~~~~l~~l~~~l 145 (148)
T 3hcz_A 110 YATPVLYVLDKNKVIIAKRIGYENLDDFLVQYEKSL 145 (148)
T ss_dssp CSSCEEEEECTTCBEEEESCCGGGHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcEEEecCCHHHHHHHHHHHHHHh
Confidence 7 4489999999999866644445554444
No 144
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.48 E-value=3.7e-14 Score=120.86 Aligned_cols=96 Identities=18% Similarity=0.353 Sum_probs=78.8
Q ss_pred ceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhc---CCeEEEEEEcCCChHHHHHhcCeE-
Q 030114 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFD---TKLKFYYVDVNKVSKDLVKRGNIS- 151 (183)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~---~~v~~~~vd~d~~~~~~~~~~~i~- 151 (183)
.+..++ .++|+..+. ..+++++|+||||||++|+.+.|.|+++++.+. .++.++.+|++.+.. .. |+|.
T Consensus 359 ~v~~l~-~~~f~~~v~---~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~--~~-~~v~~ 431 (504)
T 2b5e_A 359 SVFQLV-GKNHDEIVN---DPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDV--RG-VVIEG 431 (504)
T ss_dssp SEEEEC-TTTHHHHHH---CTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGCCC--SS-CCCSS
T ss_pred cceecc-cccHHHhhc---cCCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCcccc--cc-CCcee
Confidence 355554 567888763 568999999999999999999999999999985 279999999998764 34 8887
Q ss_pred -----EeeCCeE--EEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 -----IWKDGEM--KSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 -----~~~~Gk~--v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
++++|+. +.++.|..+. +.|.++|+++
T Consensus 432 ~Pt~~~~~~G~~~~~~~~~G~~~~----~~l~~~i~~~ 465 (504)
T 2b5e_A 432 YPTIVLYPGGKKSESVVYQGSRSL----DSLFDFIKEN 465 (504)
T ss_dssp SSEEEEECCTTSCCCCBCCSCCCH----HHHHHHHHHH
T ss_pred cCeEEEEeCCceecceEecCCCCH----HHHHHHHHhc
Confidence 7789976 7788898887 7888888765
No 145
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.48 E-value=8.3e-14 Score=95.38 Aligned_cols=73 Identities=10% Similarity=0.085 Sum_probs=63.6
Q ss_pred CcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE---E--eeCCeEEEEEecCcchhhHH
Q 030114 98 QPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS---I--WKDGEMKSEVIGGHKAWLVI 172 (183)
Q Consensus 98 k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~---~--~~~Gk~v~~~~G~~~~~~~~ 172 (183)
.+.|+.||++||++|+.+.|.|++++++++ +.|..+|++++++ ++++|+++ + +.||+++ ..|..++
T Consensus 29 m~~vv~y~~~~C~~C~~a~~~L~~l~~e~~--i~~~~vDId~d~~-l~~~ygv~VP~l~~~~dG~~v--~~g~~~~---- 99 (107)
T 2fgx_A 29 PRKLVVYGREGCHLCEEMIASLRVLQKKSW--FELEVINIDGNEH-LTRLYNDRVPVLFAVNEDKEL--CHYFLDS---- 99 (107)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHHHHHSC--CCCEEEETTTCHH-HHHHSTTSCSEEEETTTTEEE--ECSSCCC----
T ss_pred ccEEEEEeCCCChhHHHHHHHHHHHHHhcC--CeEEEEECCCCHH-HHHHhCCCCceEEEEECCEEE--EecCCCH----
Confidence 367999999999999999999999999873 8999999999988 88999988 5 8999986 3577777
Q ss_pred HHHHHHH
Q 030114 173 EEVREMI 179 (183)
Q Consensus 173 ~~l~~~i 179 (183)
++|+++|
T Consensus 100 ~~L~~~L 106 (107)
T 2fgx_A 100 DVIGAYL 106 (107)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 7888876
No 146
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.47 E-value=2.4e-13 Score=98.89 Aligned_cols=80 Identities=21% Similarity=0.472 Sum_probs=66.9
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcC------------------CCh----------------
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN------------------KVS---------------- 141 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d------------------~~~---------------- 141 (183)
.++++||+||++||++|+.+.|.|.+++++++ ++.|+.|+++ ..+
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~-~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR-EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWI 114 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT-TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSE
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC-CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCee
Confidence 67999999999999999999999999999996 9999999998 443
Q ss_pred -----HHHHHhcCeE-------EeeCCeEEEEEecCc-chhhHHHHHHHHHHhh
Q 030114 142 -----KDLVKRGNIS-------IWKDGEMKSEVIGGH-KAWLVIEEVREMIKKF 182 (183)
Q Consensus 142 -----~~~~~~~~i~-------~~~~Gk~v~~~~G~~-~~~~~~~~l~~~i~~~ 182 (183)
..+.+.|+|. +.++|+++. .|.. +. ++|+++|+++
T Consensus 115 ~~~d~~~~~~~~~v~~~P~~~lid~~G~i~~--~g~~~~~----~~l~~~l~~l 162 (165)
T 3ha9_A 115 MVMDDGSLVEKFNVRSIDYIVIMDKSSNVLY--AGTTPSL----GELESVIKSV 162 (165)
T ss_dssp EEECCSHHHHHTTCCSSSEEEEEETTCCEEE--EEESCCH----HHHHHHHHHC
T ss_pred EEeChHHHHHHhCCCCceEEEEEcCCCcEEE--eCCCCCH----HHHHHHHHHH
Confidence 1367778877 448999988 7877 66 7777777764
No 147
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.47 E-value=2.5e-13 Score=98.33 Aligned_cols=72 Identities=25% Similarity=0.498 Sum_probs=64.4
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhc-CCeEEEEEEcCC-------------------ChHHHHHhcCeE----
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFD-TKLKFYYVDVNK-------------------VSKDLVKRGNIS---- 151 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~-~~v~~~~vd~d~-------------------~~~~~~~~~~i~---- 151 (183)
.+++++|+||++||++|+.+.|.+.+++++++ .++.++.|+++. ... +++.|+|.
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~v~~~P~ 118 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQ-VQQRYGANRLPD 118 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSH-HHHHTTCCSSSE
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHH-HHHHhCCCCcce
Confidence 67999999999999999999999999999996 479999999987 344 89999988
Q ss_pred ---EeeCCeEEEEEecCcch
Q 030114 152 ---IWKDGEMKSEVIGGHKA 168 (183)
Q Consensus 152 ---~~~~Gk~v~~~~G~~~~ 168 (183)
++++|+++.++.|..+.
T Consensus 119 ~~lid~~G~i~~~~~G~~~~ 138 (158)
T 3hdc_A 119 TFIVDRKGIIRQRVTGGIEW 138 (158)
T ss_dssp EEEECTTSBEEEEEESCCCT
T ss_pred EEEEcCCCCEEEEEeCCCcc
Confidence 66899999999999764
No 148
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.47 E-value=3e-13 Score=100.03 Aligned_cols=84 Identities=19% Similarity=0.372 Sum_probs=67.2
Q ss_pred hCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChH----------------------HHHHhcCeE-
Q 030114 95 ELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSK----------------------DLVKRGNIS- 151 (183)
Q Consensus 95 ~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~----------------------~~~~~~~i~- 151 (183)
..++++||+||++||++|+.+.|.|++++++ ++.++.|+++..++ .+++.|++.
T Consensus 56 ~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 132 (176)
T 3kh7_A 56 LKGKPALVNVWGTWCPSCRVEHPELTRLAEQ---GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVYG 132 (176)
T ss_dssp GCSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCCS
T ss_pred hCCCEEEEEEECCcCHHHHHHHHHHHHHHHC---CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCCC
Confidence 3689999999999999999999999999886 58899998644321 266677776
Q ss_pred ------EeeCCeEEEEEecCcchhhHHHHHHHHHHh
Q 030114 152 ------IWKDGEMKSEVIGGHKAWLVIEEVREMIKK 181 (183)
Q Consensus 152 ------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~ 181 (183)
++++|+++.++.|..+.+.+.+.|.+++++
T Consensus 133 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~ 168 (176)
T 3kh7_A 133 APETYLIDKQGIIRHKIVGVVDQKVWREQLAPLYQQ 168 (176)
T ss_dssp SCEEEEECTTCBEEEEEESCCCHHHHHHHTHHHHHH
T ss_pred CCeEEEECCCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 668999999999999886666666666554
No 149
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.46 E-value=3.3e-13 Score=97.38 Aligned_cols=83 Identities=11% Similarity=0.193 Sum_probs=67.7
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-eEEEEEEcCCChHH----------------------HHHhcCeE-
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTK-LKFYYVDVNKVSKD----------------------LVKRGNIS- 151 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~-v~~~~vd~d~~~~~----------------------~~~~~~i~- 151 (183)
.+++++|+||++||++|+...|.|.+++++|+++ +.++.|++|...+. +.+.|++.
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~ 113 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNVTN 113 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTCCS
T ss_pred CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCccc
Confidence 5789999999999999999999999999999664 99999999987541 67788876
Q ss_pred ------EeeCCeEEEEEecCcchhhHHHHHHHHHHh
Q 030114 152 ------IWKDGEMKSEVIGGHKAWLVIEEVREMIKK 181 (183)
Q Consensus 152 ------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~ 181 (183)
+.++|+++.++.|..+. .+.+.+.++.
T Consensus 114 ~P~~~lid~~G~i~~~~~g~~~~---e~~~~~~~~~ 146 (152)
T 2lrt_A 114 LPSVFLVNRNNELSARGENIKDL---DEAIKKLLEG 146 (152)
T ss_dssp CSEEEEEETTTEEEEETTTCSCH---HHHHHHHHGG
T ss_pred CceEEEECCCCeEEEecCCHHHH---HHHHHHHHhc
Confidence 55899999999998765 2444444443
No 150
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.45 E-value=3.9e-13 Score=104.65 Aligned_cols=92 Identities=14% Similarity=0.280 Sum_probs=77.6
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeC--CCChhhhhhhHHHHHHHHHhc--CCeEEEEEEcCC-----ChHHHHHh
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMA--SWCRKCIYLKPKLEKLAAEFD--TKLKFYYVDVNK-----VSKDLVKR 147 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a--~wC~~C~~~~p~l~~la~~~~--~~v~~~~vd~d~-----~~~~~~~~ 147 (183)
+..++ .++|++++ ..+++|+|+||| |||+ +.|.|+++++.+. +++.|++||+++ +++ ++++
T Consensus 7 v~~Lt-~~nF~~~i----~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~-l~~~ 76 (240)
T 2qc7_A 7 ALPLD-TVTFYKVI----PKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNME-LSEK 76 (240)
T ss_dssp CEECC-TTHHHHHG----GGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHH-HHHH
T ss_pred ceECC-HHHHHHHH----cCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHH-HHHH
Confidence 44554 67899988 578999999999 9999 9999999999985 469999999664 666 9999
Q ss_pred cCeE--------EeeCCe--EEEEEecCcchhhHHHHHHHHHHhh
Q 030114 148 GNIS--------IWKDGE--MKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 148 ~~i~--------~~~~Gk--~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
|+|+ +|++|+ .+.++.|..+. +.|.+||+++
T Consensus 77 ~~V~~~~~PTl~~f~~G~~~~~~~y~G~~~~----~~L~~fi~~~ 117 (240)
T 2qc7_A 77 YKLDKESYPVFYLFRDGDFENPVPYTGAVKV----GAIQRWLKGQ 117 (240)
T ss_dssp TTCCGGGCSEEEEEETTCSSCCEECCSCSCH----HHHHHHHHHT
T ss_pred cCCCCCCCCEEEEEeCCCcCcceeecCCCCH----HHHHHHHHHh
Confidence 9987 889998 46788999887 8888888765
No 151
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.45 E-value=2.6e-13 Score=96.15 Aligned_cols=80 Identities=8% Similarity=0.121 Sum_probs=62.8
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHH---HHHHhcC-CeEEEEEEcCCChHHH-----------------------HHhc
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEK---LAAEFDT-KLKFYYVDVNKVSKDL-----------------------VKRG 148 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~---la~~~~~-~v~~~~vd~d~~~~~~-----------------------~~~~ 148 (183)
.+++++|+||++||++|+.+.|.+.+ +++++++ ++.++.|++|..++.+ ++.|
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 105 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQLY 105 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHHc
Confidence 68999999999999999999999988 8888854 5999999999765421 2367
Q ss_pred CeE-------EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 149 NIS-------IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 149 ~i~-------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
+|. +.++|+++. +..+. ++|+++|+++
T Consensus 106 ~v~~~P~~~lid~~G~i~~---~~~~~----~~l~~~l~~~ 139 (142)
T 3ewl_A 106 DIRATPTIYLLDGRKRVIL---KDTSM----EQLIDYLATQ 139 (142)
T ss_dssp CCCSSSEEEEECTTCBEEE---CSCCH----HHHHHHHHC-
T ss_pred CCCCCCeEEEECCCCCEEe---cCCCH----HHHHHHHHHH
Confidence 776 558899876 34455 7788887754
No 152
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.44 E-value=6.6e-13 Score=95.17 Aligned_cols=82 Identities=13% Similarity=0.320 Sum_probs=65.7
Q ss_pred CCCcEEEEEeCCCChh--hhhhhHHHHHHHHHh-cCC-eEEEEEEcCCCh------------------------HHHHHh
Q 030114 96 LSQPILIDWMASWCRK--CIYLKPKLEKLAAEF-DTK-LKFYYVDVNKVS------------------------KDLVKR 147 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~--C~~~~p~l~~la~~~-~~~-v~~~~vd~d~~~------------------------~~~~~~ 147 (183)
.+++++|+||++||++ |+.+.|.|.+++++| +++ +.++.|++|..+ ..+++.
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 111 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQ 111 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHH
Confidence 6899999999999999 999999999999999 654 999999999764 147888
Q ss_pred cCeE-------EeeCCeEEEEEecCcchhhHHHHHHHHHH
Q 030114 148 GNIS-------IWKDGEMKSEVIGGHKAWLVIEEVREMIK 180 (183)
Q Consensus 148 ~~i~-------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~ 180 (183)
|+|. +.++|+++.+.. +.+.+.+.|.++++
T Consensus 112 ~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ll~ 148 (150)
T 3fw2_A 112 YSIYKIPANILLSSDGKILAKNL---RGEELKKKIENIVE 148 (150)
T ss_dssp TTCCSSSEEEEECTTSBEEEESC---CHHHHHHHHHHHHH
T ss_pred cCCCccCeEEEECCCCEEEEccC---CHHHHHHHHHHHHh
Confidence 8887 558999988875 44344445555444
No 153
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=99.44 E-value=7.3e-13 Score=98.15 Aligned_cols=87 Identities=14% Similarity=0.158 Sum_probs=69.9
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-eEEEEEEcCC-------ChH---HHHHh-cCe-------------
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTK-LKFYYVDVNK-------VSK---DLVKR-GNI------------- 150 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~-v~~~~vd~d~-------~~~---~~~~~-~~i------------- 150 (183)
.++++||+||++||++|+...|.|.+++++|+++ +.++.|+++. .++ .++++ +++
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 116 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILGS 116 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSST
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCHHHHHHHHHHhcCCCCceeeeeeccCc
Confidence 6889999999999999999999999999999764 9999998764 221 23333 221
Q ss_pred ----------------------E--EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 151 ----------------------S--IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 151 ----------------------~--~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
. |+++|+++.++.|..+.+.+.+.|+++|++.
T Consensus 117 ~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~lL~~~ 172 (180)
T 3kij_A 117 EGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDIAALVRQV 172 (180)
T ss_dssp TCCHHHHHHHHHHTCCCSSTTCEEEECTTSCEEEEECTTCCGGGTHHHHHHHHHHH
T ss_pred cccHHHHHHHhcCCCCccccceEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 2 6789999999999998877888888877654
No 154
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.44 E-value=2.5e-13 Score=104.10 Aligned_cols=93 Identities=16% Similarity=0.186 Sum_probs=74.8
Q ss_pred CchhHHHHHHHhhhCCCcEEEEEe-----CCCChhhhhhhHHHHHHHHHh--cCCeEEEEEEcCCChHHHHHhcCeE---
Q 030114 82 DSDHLDQILLRAQELSQPILIDWM-----ASWCRKCIYLKPKLEKLAAEF--DTKLKFYYVDVNKVSKDLVKRGNIS--- 151 (183)
Q Consensus 82 ~~~~~~~~l~~a~~~~k~vlv~F~-----a~wC~~C~~~~p~l~~la~~~--~~~v~~~~vd~d~~~~~~~~~~~i~--- 151 (183)
+.+++.+.+.. ...++++|.|| +|||++|+.+.|.++++++++ .+++.+++||++++++ ++++|+|+
T Consensus 7 ~~~~l~~~~~~--~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~~-l~~~~~v~~~P 83 (229)
T 2ywm_A 7 VRMQLKELAQK--EFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTHKE-ETEKYGVDRVP 83 (229)
T ss_dssp HHHHHHHHHHH--HCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCHH-HHHHTTCCBSS
T ss_pred HHHHHHHHHHH--hccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcccHH-HHHHcCCCcCc
Confidence 34566666621 24677777776 899999999999999999888 6789999999999988 99999999
Q ss_pred ---EeeCCeEEEEEecCcchhhHHHHHHHHHHh
Q 030114 152 ---IWKDGEMKSEVIGGHKAWLVIEEVREMIKK 181 (183)
Q Consensus 152 ---~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~ 181 (183)
+|++|+...++.|..+. +++..++..
T Consensus 84 tl~~~~~~~~~~~~~G~~~~----~~l~~~~~~ 112 (229)
T 2ywm_A 84 TIVIEGDKDYGIRYIGLPAG----LEFTTLING 112 (229)
T ss_dssp EEEEESSSCCCEEEESCCCT----THHHHHHHH
T ss_pred EEEEECCCcccceecCCccH----HHHHHHHHH
Confidence 77778888999999887 555555543
No 155
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.43 E-value=7.6e-13 Score=108.37 Aligned_cols=85 Identities=16% Similarity=0.173 Sum_probs=68.5
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcC-CeEEEEEEcCCC--------------------------hHHHHHhc
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNKV--------------------------SKDLVKRG 148 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~d~~--------------------------~~~~~~~~ 148 (183)
.++++||+||++||++|+.+.|.|.+++++|++ ++.++.|+++.. ...+++.|
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~y 160 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNY 160 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHc
Confidence 589999999999999999999999999999975 599999987631 11377888
Q ss_pred CeE-------EeeCCeEEEEEecCcchhhHHHHHHHHHH
Q 030114 149 NIS-------IWKDGEMKSEVIGGHKAWLVIEEVREMIK 180 (183)
Q Consensus 149 ~i~-------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~ 180 (183)
+|. |+++|+++.++.|..+.+.+.+.|.++++
T Consensus 161 gV~~~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~lL~ 199 (352)
T 2hyx_A 161 RNRYWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQLLN 199 (352)
T ss_dssp TCCEESEEEEECTTSBEEEEEESBCCHHHHHHHHHHHHH
T ss_pred CCCccCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHHHh
Confidence 887 55899999999999888444455554443
No 156
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.42 E-value=1.5e-12 Score=96.57 Aligned_cols=82 Identities=18% Similarity=0.462 Sum_probs=64.6
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhc-CCeEEEEEEcCCCh----HHHHHhcCe--------------------
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFD-TKLKFYYVDVNKVS----KDLVKRGNI-------------------- 150 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~-~~v~~~~vd~d~~~----~~~~~~~~i-------------------- 150 (183)
.+++++|+||++||++|+.+.|.|.+++++++ .++.++.|+++... ..+.+++++
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 138 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAI 138 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTT
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccc
Confidence 68999999999999999999999999999996 47999999998651 235555554
Q ss_pred ----E------EeeCCeEEEEEecCcc--hhhHHHHHHHHHHh
Q 030114 151 ----S------IWKDGEMKSEVIGGHK--AWLVIEEVREMIKK 181 (183)
Q Consensus 151 ----~------~~~~Gk~v~~~~G~~~--~~~~~~~l~~~i~~ 181 (183)
. +.++|+++.++.|..+ . +++.++|++
T Consensus 139 ~~~~~~P~~~lid~~G~i~~~~~g~~~~~~----~~l~~~l~~ 177 (186)
T 1jfu_A 139 GRALGMPTSVLVDPQGCEIATIAGPAEWAS----EDALKLIRA 177 (186)
T ss_dssp TCCSSSSEEEEECTTSBEEEEEESCCCTTS----HHHHHHHHH
T ss_pred cccCCCCEEEEECCCCCEEEEEecCCccCH----HHHHHHHHH
Confidence 2 5589999999999865 4 445555443
No 157
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.41 E-value=2e-12 Score=94.27 Aligned_cols=86 Identities=14% Similarity=0.179 Sum_probs=69.1
Q ss_pred CCCcEEEEEeCCCChh-hhhhhHHHHHHHHHhc-----CCeEEEEEEcCCC---h------------------------H
Q 030114 96 LSQPILIDWMASWCRK-CIYLKPKLEKLAAEFD-----TKLKFYYVDVNKV---S------------------------K 142 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~-C~~~~p~l~~la~~~~-----~~v~~~~vd~d~~---~------------------------~ 142 (183)
.++++||+||++||++ |+.+.|.|.+++++++ +++.++.|++|.. + .
T Consensus 25 ~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~ 104 (171)
T 2rli_A 25 RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVA 104 (171)
T ss_dssp TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHH
T ss_pred CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 5799999999999998 9999999999999984 4799999998831 1 1
Q ss_pred HHHHhcCe-------------------E---EeeCCeEEEEEecCcchhhHHHHHHHHHHh
Q 030114 143 DLVKRGNI-------------------S---IWKDGEMKSEVIGGHKAWLVIEEVREMIKK 181 (183)
Q Consensus 143 ~~~~~~~i-------------------~---~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~ 181 (183)
.+++.|+| . ++++|+++.++.|..+.+.+.+.|.+++++
T Consensus 105 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~ 165 (171)
T 2rli_A 105 QASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRRHMAA 165 (171)
T ss_dssp HHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHHHHHH
T ss_pred HHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 36777775 3 668999999999998885666666666554
No 158
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.41 E-value=1.3e-12 Score=94.54 Aligned_cols=87 Identities=16% Similarity=0.265 Sum_probs=70.0
Q ss_pred CCCcEEEEEeCCCChh-hhhhhHHHHHHHHHhcC-----CeEEEEEEcCCCh---------------------------H
Q 030114 96 LSQPILIDWMASWCRK-CIYLKPKLEKLAAEFDT-----KLKFYYVDVNKVS---------------------------K 142 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~-C~~~~p~l~~la~~~~~-----~v~~~~vd~d~~~---------------------------~ 142 (183)
.+++++|+||++||++ |+...|.|.++++++++ ++.++.|++|... .
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~ 101 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVD 101 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 5899999999999998 99999999999999853 7999999987521 1
Q ss_pred HHHHhcCe-------------------E---EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 143 DLVKRGNI-------------------S---IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 143 ~~~~~~~i-------------------~---~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
.+++.|++ . ++++|+++.++.|..+.+.+.+.|+++++++
T Consensus 102 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~~ 163 (164)
T 2ggt_A 102 QVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIATHMRPY 163 (164)
T ss_dssp HHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHHHHGGG
T ss_pred HHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHHHHHHHhc
Confidence 26677775 3 6689999999999988866666666666543
No 159
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=99.41 E-value=1e-12 Score=95.53 Aligned_cols=99 Identities=10% Similarity=0.093 Sum_probs=75.1
Q ss_pred chhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHH---HHHHHHhcCCeEEEEEEcCCCh-HHHHHhcCeE-------
Q 030114 83 SDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKL---EKLAAEFDTKLKFYYVDVNKVS-KDLVKRGNIS------- 151 (183)
Q Consensus 83 ~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l---~~la~~~~~~v~~~~vd~d~~~-~~~~~~~~i~------- 151 (183)
..+|++++..|+..+|+++|+|+++||.+|+.|...+ .++.+.++.++.++++|++... ..+.++|++.
T Consensus 28 ~~~~~~Al~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~f 107 (153)
T 2dlx_A 28 KGSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSI 107 (153)
T ss_dssp CSCHHHHHHHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESSSHHHHHHHHHHTCCSSSEEEE
T ss_pred ccCHHHHHHHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecCCHhHHHHHHHcCCCCCCEEEE
Confidence 4578899888878899999999999999999997654 4455444457999999997643 2488899988
Q ss_pred EeeC-CeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 IWKD-GEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 ~~~~-Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
+..+ |+++.++.| .+++.+.+.|.++++++
T Consensus 108 ld~~~G~~l~~~~g-~~~~~fl~~L~~~l~~~ 138 (153)
T 2dlx_A 108 LDPRTGQKLVEWHQ-LDVSSFLDQVTGFLGEH 138 (153)
T ss_dssp ECTTTCCCCEEESS-CCHHHHHHHHHHHHHHT
T ss_pred EeCCCCcEeeecCC-CCHHHHHHHHHHHHHhc
Confidence 4456 778877655 78866666676666543
No 160
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.40 E-value=9.4e-13 Score=98.35 Aligned_cols=83 Identities=12% Similarity=0.141 Sum_probs=63.5
Q ss_pred CCC-cEEEEEeCCCChhhhhhhHHHHHHHHHhcC-CeEEEEEEcCC-----------------------------ChHHH
Q 030114 96 LSQ-PILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNK-----------------------------VSKDL 144 (183)
Q Consensus 96 ~~k-~vlv~F~a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~d~-----------------------------~~~~~ 144 (183)
.++ ++||+||++||++|+.+.|.|.+++++|++ ++.++.|+++. .. .+
T Consensus 44 ~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~-~~ 122 (196)
T 2ywi_A 44 KSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQ-EV 122 (196)
T ss_dssp CCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSC-HH
T ss_pred CCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCch-HH
Confidence 455 599999999999999999999999999965 49999999852 22 37
Q ss_pred HHhcCeE-------EeeCCeEEEE---------EecCcchhhHHHHHHHHH
Q 030114 145 VKRGNIS-------IWKDGEMKSE---------VIGGHKAWLVIEEVREMI 179 (183)
Q Consensus 145 ~~~~~i~-------~~~~Gk~v~~---------~~G~~~~~~~~~~l~~~i 179 (183)
++.|+|. +.++|+++.+ +.|..+.+.+.+.|++++
T Consensus 123 ~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll 173 (196)
T 2ywi_A 123 AKAYDAACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALL 173 (196)
T ss_dssp HHHHTCCEESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHH
T ss_pred HHHhCCCCCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHH
Confidence 7888876 4589999988 456667644444444444
No 161
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.40 E-value=1e-12 Score=97.68 Aligned_cols=65 Identities=14% Similarity=0.156 Sum_probs=55.3
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCC-----------------------------ChHHHHH
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNK-----------------------------VSKDLVK 146 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~-----------------------------~~~~~~~ 146 (183)
.++++||+||++||++|+.+.|.|++++++|++++.++.|+++. .. .+++
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~-~~~~ 110 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQ-EVAK 110 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSS-HHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcc-hHHH
Confidence 57999999999999999999999999999996669999999842 22 3778
Q ss_pred hcCeE-------EeeCCeEEEE
Q 030114 147 RGNIS-------IWKDGEMKSE 161 (183)
Q Consensus 147 ~~~i~-------~~~~Gk~v~~ 161 (183)
.|++. +.++|+++.+
T Consensus 111 ~~~v~~~P~~~lid~~G~i~~~ 132 (188)
T 2cvb_A 111 AYRALRTPEVFLFDERRLLRYH 132 (188)
T ss_dssp HTTCCEESEEEEECTTCBEEEE
T ss_pred HcCCCCCCeEEEECCCCcEEEE
Confidence 88887 4588998877
No 162
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.40 E-value=8e-13 Score=96.81 Aligned_cols=69 Identities=16% Similarity=0.379 Sum_probs=58.5
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcC--CeEEEEEEcCCCh-----------------------HHHHHhcCe
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT--KLKFYYVDVNKVS-----------------------KDLVKRGNI 150 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~--~v~~~~vd~d~~~-----------------------~~~~~~~~i 150 (183)
.++++||+|||+||++|+.+.|.|.+++++|++ ++.++.|++|... ..+++.|+|
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 126 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSV 126 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCC
Confidence 689999999999999999999999999999975 6999999998772 348889998
Q ss_pred E-------EeeC-CeEEEEEec
Q 030114 151 S-------IWKD-GEMKSEVIG 164 (183)
Q Consensus 151 ~-------~~~~-Gk~v~~~~G 164 (183)
. +.++ |+++.+..+
T Consensus 127 ~~~Pt~~lid~~~G~iv~~~~~ 148 (165)
T 3s9f_A 127 ESIPTLIGLNADTGDTVTTRAR 148 (165)
T ss_dssp CSSSEEEEEETTTCCEEESCHH
T ss_pred CCCCEEEEEeCCCCEEEecccH
Confidence 7 4566 988776443
No 163
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.38 E-value=1.2e-12 Score=93.10 Aligned_cols=68 Identities=12% Similarity=0.285 Sum_probs=57.6
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhc--CCeEEEEEEcCCCh-----------------------HHHHHhcCe
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFD--TKLKFYYVDVNKVS-----------------------KDLVKRGNI 150 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~--~~v~~~~vd~d~~~-----------------------~~~~~~~~i 150 (183)
.+++++|+||++||++|+.+.|.|.+++++++ .++.++.|+++... ..+++.|+|
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDV 106 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCC
Confidence 67999999999999999999999999999997 47999999998742 248888998
Q ss_pred E-------Ee-eCCeEEEEEe
Q 030114 151 S-------IW-KDGEMKSEVI 163 (183)
Q Consensus 151 ~-------~~-~~Gk~v~~~~ 163 (183)
. +. ++|+++.+..
T Consensus 107 ~~~P~~~lid~~~G~i~~~~~ 127 (144)
T 1i5g_A 107 KSIPTLVGVEADSGNIITTQA 127 (144)
T ss_dssp CSSSEEEEEETTTCCEEESCH
T ss_pred CCCCEEEEEECCCCcEEeccc
Confidence 7 44 6899877543
No 164
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.38 E-value=2.2e-12 Score=96.20 Aligned_cols=43 Identities=19% Similarity=0.160 Sum_probs=40.1
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-eEEEEEEcC
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTK-LKFYYVDVN 138 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~-v~~~~vd~d 138 (183)
.++++||+||++||++|+.+.|.|.+++++|+++ +.++.|++|
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d 88 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSN 88 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBC
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECc
Confidence 6899999999999999999999999999999764 999999887
No 165
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.37 E-value=1.6e-12 Score=92.79 Aligned_cols=69 Identities=16% Similarity=0.351 Sum_probs=58.1
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhc--CCeEEEEEEcCCCh-----------------------HHHHHhcCe
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFD--TKLKFYYVDVNKVS-----------------------KDLVKRGNI 150 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~--~~v~~~~vd~d~~~-----------------------~~~~~~~~i 150 (183)
.+++++|+||++||++|+.+.|.|.+++++++ .++.++.|+++... ..++++|+|
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNV 106 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTC
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCC
Confidence 68999999999999999999999999999997 47999999998742 248889998
Q ss_pred E-------Ee-eCCeEEEEEec
Q 030114 151 S-------IW-KDGEMKSEVIG 164 (183)
Q Consensus 151 ~-------~~-~~Gk~v~~~~G 164 (183)
. +. ++|+++.+..+
T Consensus 107 ~~~Pt~~lid~~~G~i~~~~~~ 128 (146)
T 1o8x_A 107 ESIPTLIGVDADSGDVVTTRAR 128 (146)
T ss_dssp CSSSEEEEEETTTCCEEESCHH
T ss_pred CCCCEEEEEECCCCeEEEecch
Confidence 7 44 58998776544
No 166
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=99.37 E-value=2.6e-12 Score=97.76 Aligned_cols=43 Identities=16% Similarity=0.170 Sum_probs=39.9
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-eEEEEEEcC
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTK-LKFYYVDVN 138 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~-v~~~~vd~d 138 (183)
.++++||+|||+||++|+...|.|++++++|+++ +.++.|+++
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d 89 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCN 89 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECC
Confidence 6899999999999999999999999999999754 999999986
No 167
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.36 E-value=6.3e-12 Score=91.34 Aligned_cols=85 Identities=8% Similarity=-0.001 Sum_probs=66.0
Q ss_pred CCCc-EEEEEe-CCCChhhhhhhHHHHHHHHHhcC-CeEEEEEEcCC---------------------ChHHHHHhcCeE
Q 030114 96 LSQP-ILIDWM-ASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNK---------------------VSKDLVKRGNIS 151 (183)
Q Consensus 96 ~~k~-vlv~F~-a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~d~---------------------~~~~~~~~~~i~ 151 (183)
.+++ ++|+|| ++||++|+...|.|.+++++|++ ++.++.|+.|. .. .+++.|++.
T Consensus 27 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~v~ 105 (161)
T 3drn_A 27 IGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDK-KIRELYGAK 105 (161)
T ss_dssp TTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTS-HHHHHTTCC
T ss_pred cCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcH-HHHHHcCCC
Confidence 4666 999999 99999999999999999999975 49999999973 23 377788763
Q ss_pred -----------EeeCCeEEEEEecCcchhhHHHHHHHHHHh
Q 030114 152 -----------IWKDGEMKSEVIGGHKAWLVIEEVREMIKK 181 (183)
Q Consensus 152 -----------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~ 181 (183)
+.++|+++.++.|........+++.+.|++
T Consensus 106 ~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~il~~l~~ 146 (161)
T 3drn_A 106 GFILPARITFVIDKKGIIRHIYNSQMNPANHVNEALKALKQ 146 (161)
T ss_dssp CSSSCCCEEEEECTTSBEEEEEECSSCTTHHHHHHHHHHHH
T ss_pred CcCcccceEEEECCCCEEEEEEecCCCCCcCHHHHHHHHHH
Confidence 668999999999954443444555555543
No 168
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=99.34 E-value=1.6e-12 Score=87.87 Aligned_cols=75 Identities=16% Similarity=0.264 Sum_probs=61.0
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcC--CChHHHHHhcCeE----EeeCCeEEEEEecCcchh
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN--KVSKDLVKRGNIS----IWKDGEMKSEVIGGHKAW 169 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d--~~~~~~~~~~~i~----~~~~Gk~v~~~~G~~~~~ 169 (183)
...+.++.|+++||++|+.+.|.|++++ .++.|..+|++ +.++ ++++|+ . ++.+|+.+ ..|..+.
T Consensus 14 ~~~~~v~~f~~~~C~~C~~~~~~L~~l~----~~i~~~~vdi~~~~~~e-l~~~~g-~~vP~l~~~g~~~--~~~g~~~- 84 (100)
T 1wjk_A 14 RALPVLTLFTKAPCPLCDEAKEVLQPYK----DRFILQEVDITLPENST-WYERYK-FDIPVFHLNGQFL--MMHRVNT- 84 (100)
T ss_dssp CCCCEEEEEECSSCHHHHHHHHHTSTTS----SSSEEEEEETTSSTTHH-HHHHSS-SSCSEEEESSSEE--EESSCCH-
T ss_pred CCCCEEEEEeCCCCcchHHHHHHHHHhh----hCCeEEEEECCCcchHH-HHHHHC-CCCCEEEECCEEE--EecCCCH-
Confidence 5678899999999999999999998764 34899999999 6665 888998 6 88999875 3455666
Q ss_pred hHHHHHHHHHHhh
Q 030114 170 LVIEEVREMIKKF 182 (183)
Q Consensus 170 ~~~~~l~~~i~~~ 182 (183)
++|+++|+++
T Consensus 85 ---~~l~~~l~~~ 94 (100)
T 1wjk_A 85 ---SKLEKQLRKL 94 (100)
T ss_dssp ---HHHHHHHHSS
T ss_pred ---HHHHHHHHHH
Confidence 7888888765
No 169
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=99.34 E-value=4.3e-13 Score=92.25 Aligned_cols=77 Identities=16% Similarity=0.265 Sum_probs=56.4
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCCh----HHHHHhcCeE----EeeCCeEEEEEecCc-
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVS----KDLVKRGNIS----IWKDGEMKSEVIGGH- 166 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~----~~~~~~~~i~----~~~~Gk~v~~~~G~~- 166 (183)
.++++++ ||++||++|+.+.|.|+++.. .+.++.+|.+... ..+++.+++. +|.+|+.+..+.|..
T Consensus 18 ~~~~vv~-f~a~~C~~C~~~~~~l~~~~~----~~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~~~~g~~v~~~~~~~~ 92 (116)
T 2e7p_A 18 SSAPVVV-FSKTYCGYCNRVKQLLTQVGA----SYKVVELDELSDGSQLQSALAHWTGRGTVPNVFIGGKQIGGCDTVVE 92 (116)
T ss_dssp TSSSEEE-EECTTCHHHHHHHHHHHHHTC----CCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEEETTEEEECHHHHHH
T ss_pred cCCCEEE-EECCCChhHHHHHHHHHHcCC----CeEEEEccCCCChHHHHHHHHHHhCCCCcCEEEECCEEECChHHHHH
Confidence 4567777 999999999999999988853 3456666655541 2388899987 888999887766654
Q ss_pred --chhhHHHHHHHHHHh
Q 030114 167 --KAWLVIEEVREMIKK 181 (183)
Q Consensus 167 --~~~~~~~~l~~~i~~ 181 (183)
+. ++|.++|++
T Consensus 93 ~~~~----~~l~~~l~~ 105 (116)
T 2e7p_A 93 KHQR----NELLPLLQD 105 (116)
T ss_dssp HHHT----TCHHHHHHH
T ss_pred HHhC----ChHHHHHHH
Confidence 44 566666654
No 170
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.34 E-value=7.4e-12 Score=93.52 Aligned_cols=85 Identities=16% Similarity=0.192 Sum_probs=64.7
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-eEEEEEEcCC-------ChH---HHH-Hh----------------
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTK-LKFYYVDVNK-------VSK---DLV-KR---------------- 147 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~-v~~~~vd~d~-------~~~---~~~-~~---------------- 147 (183)
.++++||+||++||++|+...|.|.+++++++++ +.++.|++|. .++ .++ ++
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~~ 126 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 126 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCcc
Confidence 6799999999999999999999999999999754 9999999873 222 122 22
Q ss_pred -------------cCe----------E---EeeCCeEEEEEecCcchhhHHHHHHHHHH
Q 030114 148 -------------GNI----------S---IWKDGEMKSEVIGGHKAWLVIEEVREMIK 180 (183)
Q Consensus 148 -------------~~i----------~---~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~ 180 (183)
+++ . |+++|+++.++.|..+.+.+.+.|.++++
T Consensus 127 ~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 185 (190)
T 2vup_A 127 NAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEKKLIPLLE 185 (190)
T ss_dssp TBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHHH
T ss_pred cccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHHHh
Confidence 132 2 66899999999999888555555555543
No 171
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.34 E-value=9.7e-12 Score=90.37 Aligned_cols=85 Identities=13% Similarity=0.152 Sum_probs=66.1
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcC-CeEEEEEEcCC-------ChH---HH-HHhc---------------
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNK-------VSK---DL-VKRG--------------- 148 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~d~-------~~~---~~-~~~~--------------- 148 (183)
.+++++|+||++||++|+...|.|.+++++|++ ++.++.|++|. .++ .+ .+++
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 109 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQFDMFSKIKVNGS 109 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSEEBCCCCCSST
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCCHHHHHHHHHHhcCCCCceEEEEeecCc
Confidence 689999999999999999999999999999965 49999999863 111 12 1211
Q ss_pred --------------C-----e----E---EeeCCeEEEEEecCcchhhHHHHHHHHHH
Q 030114 149 --------------N-----I----S---IWKDGEMKSEVIGGHKAWLVIEEVREMIK 180 (183)
Q Consensus 149 --------------~-----i----~---~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~ 180 (183)
+ | . ++++|+++.++.|..+.+.+.+.|+++++
T Consensus 110 ~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 167 (169)
T 2v1m_A 110 DADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGDIMELLE 167 (169)
T ss_dssp TSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHHH
T ss_pred cccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCCCCCHHHHHHHHHHHhc
Confidence 2 2 2 66899999999998888666677766664
No 172
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.34 E-value=6e-12 Score=93.30 Aligned_cols=84 Identities=20% Similarity=0.185 Sum_probs=65.7
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-eEEEEEEcCC-------ChH---HHHHh-c---------------
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTK-LKFYYVDVNK-------VSK---DLVKR-G--------------- 148 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~-v~~~~vd~d~-------~~~---~~~~~-~--------------- 148 (183)
.++++||+||++||++|+...|.|++++++|+++ +.++.|+++. .++ .++++ +
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~g~ 127 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTGT 127 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSST
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCceeEeecccCCc
Confidence 6899999999999999999999999999999654 9999999864 221 12222 1
Q ss_pred -------------C-------eE--EeeCCeEEEEEecCcchhhHHHHHHHHHHhhC
Q 030114 149 -------------N-------IS--IWKDGEMKSEVIGGHKAWLVIEEVREMIKKFV 183 (183)
Q Consensus 149 -------------~-------i~--~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~l 183 (183)
. .. ++++|+++.++.|..+. ++|.+.|++.|
T Consensus 128 ~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~~~~~g~~~~----~~l~~~i~~ll 180 (181)
T 2p31_A 128 GAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVVGAWDPTVSV----EEVRPQITALV 180 (181)
T ss_dssp TSCHHHHHHHHHHSCCCCSTTCEEEECTTSCEEEEECTTSCH----HHHHHHHHTTC
T ss_pred cchhhhhhhhhcCCCccccceeEEEEcCCCCEEEEeCCCCCH----HHHHHHHHHHh
Confidence 1 12 67899999999998887 77877777654
No 173
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.33 E-value=3.3e-12 Score=90.62 Aligned_cols=68 Identities=16% Similarity=0.373 Sum_probs=56.9
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhc--CCeEEEEEEcCCCh-----------------------HHHHHhcCe
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFD--TKLKFYYVDVNKVS-----------------------KDLVKRGNI 150 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~--~~v~~~~vd~d~~~-----------------------~~~~~~~~i 150 (183)
.+++++|+||++||++|+.+.|.|.+++++++ .++.++.|++|... ..+++.|+|
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 106 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGV 106 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTC
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCC
Confidence 68999999999999999999999999999996 47999999998743 247888888
Q ss_pred E-------Ee-eCCeEEEEEe
Q 030114 151 S-------IW-KDGEMKSEVI 163 (183)
Q Consensus 151 ~-------~~-~~Gk~v~~~~ 163 (183)
. +. ++|+++.+..
T Consensus 107 ~~~Pt~~lid~~~G~i~~~~~ 127 (144)
T 1o73_A 107 ESIPTLITINADTGAIIGTQA 127 (144)
T ss_dssp CSSSEEEEEETTTCCEEESCH
T ss_pred CCCCEEEEEECCCCeEEecch
Confidence 7 44 4898877543
No 174
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.33 E-value=5.1e-12 Score=91.95 Aligned_cols=84 Identities=18% Similarity=0.270 Sum_probs=64.4
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-eEEEEEEcCC-------ChH---HHHH-hc---------------
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTK-LKFYYVDVNK-------VSK---DLVK-RG--------------- 148 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~-v~~~~vd~d~-------~~~---~~~~-~~--------------- 148 (183)
.++++||+||++||++|+...|.|.+++++++++ +.++.|++|. .++ .+++ ++
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVNGE 110 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEeeeccCCC
Confidence 6899999999999999999999999999999764 9999999863 221 1222 21
Q ss_pred --------------Ce---------E---EeeCCeEEEEEecCcchhhHHHHHHHHH
Q 030114 149 --------------NI---------S---IWKDGEMKSEVIGGHKAWLVIEEVREMI 179 (183)
Q Consensus 149 --------------~i---------~---~~~~Gk~v~~~~G~~~~~~~~~~l~~~i 179 (183)
++ + ++++|+++.++.|..+.+.+.+.|++++
T Consensus 111 ~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 167 (170)
T 2p5q_A 111 NASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIKQLL 167 (170)
T ss_dssp TBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHT
T ss_pred chHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCCCCCHHHHHHHHHHHh
Confidence 22 2 6689999999999988855555555544
No 175
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.33 E-value=5e-12 Score=92.18 Aligned_cols=83 Identities=10% Similarity=0.219 Sum_probs=66.7
Q ss_pred CCCcEEEEEeCCCChh-hhhhhHHHHHHHHHhcC----CeEEEEEEcCCC---h------------------------HH
Q 030114 96 LSQPILIDWMASWCRK-CIYLKPKLEKLAAEFDT----KLKFYYVDVNKV---S------------------------KD 143 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~-C~~~~p~l~~la~~~~~----~v~~~~vd~d~~---~------------------------~~ 143 (183)
.+++++|+||++||++ |+.+.|.|.++++++++ ++.++.|++|.. + ..
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 6899999999999998 99999999999999863 799999998853 1 12
Q ss_pred HHHhcC---------------eE-------EeeCCeEEEEEecCc--chhhHHHHHHHHHHhhC
Q 030114 144 LVKRGN---------------IS-------IWKDGEMKSEVIGGH--KAWLVIEEVREMIKKFV 183 (183)
Q Consensus 144 ~~~~~~---------------i~-------~~~~Gk~v~~~~G~~--~~~~~~~~l~~~i~~~l 183 (183)
+++.|+ |. +. +|+++.++.|.. +. ++|.+.|+++|
T Consensus 114 ~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~~g~~~~~~----~~l~~~l~~ll 172 (172)
T 2k6v_A 114 AAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLYSPDKAEAT----DRVVADLQALL 172 (172)
T ss_dssp HHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEECHHHHTCH----HHHHHHHHHCC
T ss_pred HHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEECCCCCCCH----HHHHHHHHHhC
Confidence 555554 33 55 999999999987 66 78888887654
No 176
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.33 E-value=6.2e-12 Score=96.15 Aligned_cols=65 Identities=12% Similarity=0.296 Sum_probs=54.1
Q ss_pred CCC-cEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-eEEEEEEcC-----------------------------CChHHH
Q 030114 96 LSQ-PILIDWMASWCRKCIYLKPKLEKLAAEFDTK-LKFYYVDVN-----------------------------KVSKDL 144 (183)
Q Consensus 96 ~~k-~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~-v~~~~vd~d-----------------------------~~~~~~ 144 (183)
.++ ++||+||++||++|+.+.|.|++++++|+++ +.|+.|+++ ... .+
T Consensus 57 ~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~-~~ 135 (218)
T 3u5r_E 57 KDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQ-SV 135 (218)
T ss_dssp TTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTC-HH
T ss_pred CCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCcc-HH
Confidence 566 4999999999999999999999999999764 999999995 222 37
Q ss_pred HHhcCeE-------EeeCCeEEEE
Q 030114 145 VKRGNIS-------IWKDGEMKSE 161 (183)
Q Consensus 145 ~~~~~i~-------~~~~Gk~v~~ 161 (183)
++.|++. |.++|+++.+
T Consensus 136 ~~~~~v~~~P~~~liD~~G~i~~~ 159 (218)
T 3u5r_E 136 AKAYGAACTPDFFLYDRERRLVYH 159 (218)
T ss_dssp HHHHTCCEESEEEEECTTCBEEEE
T ss_pred HHHcCCCCCCeEEEECCCCcEEEe
Confidence 7888877 5588998765
No 177
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.30 E-value=8.8e-12 Score=91.38 Aligned_cols=84 Identities=18% Similarity=0.202 Sum_probs=63.0
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcC-CeEEEEEEcCC-------ChH---HHH-H-----------------
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNK-------VSK---DLV-K----------------- 146 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~d~-------~~~---~~~-~----------------- 146 (183)
.++++||+|||+||++|+ ..|.|.++++++++ ++.++.|+++. .++ .+. +
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~~~ 109 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNGG 109 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC------------------CCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCCCc
Confidence 689999999999999999 99999999999965 49999998741 111 122 1
Q ss_pred ------------hcCe----------E---EeeCCeEEEEEecCcchhhHHHHHHHHHH
Q 030114 147 ------------RGNI----------S---IWKDGEMKSEVIGGHKAWLVIEEVREMIK 180 (183)
Q Consensus 147 ------------~~~i----------~---~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~ 180 (183)
.|++ . |+++|+++.++.|..+.+.+.+.|.++++
T Consensus 110 ~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (171)
T 3cmi_A 110 NEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETIEELLK 168 (171)
T ss_dssp TBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHHHHHHHT
T ss_pred cchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHHHH
Confidence 2332 2 66899999999998888666666666654
No 178
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.30 E-value=1e-11 Score=92.07 Aligned_cols=84 Identities=15% Similarity=0.151 Sum_probs=65.4
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcC-CeEEEEEEcCC-------ChHH---HHHh-----------------
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNK-------VSKD---LVKR----------------- 147 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~d~-------~~~~---~~~~----------------- 147 (183)
.++++||+||++||++|+...|.|.+++++|++ ++.++.|++|. .++. ++++
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~ 125 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDD 125 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHTTTCCSEEBCCCCCSSTT
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCCCCCHHHHHHHHHHcCCCceEEeeeccCCcc
Confidence 689999999999999999999999999999975 49999999863 1111 1111
Q ss_pred ----c----------C-----e----E---EeeCCeEEEEEecCcchhhHHHHHHHHHHhhC
Q 030114 148 ----G----------N-----I----S---IWKDGEMKSEVIGGHKAWLVIEEVREMIKKFV 183 (183)
Q Consensus 148 ----~----------~-----i----~---~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~l 183 (183)
| + | + |+++|+++.++.|..+. ++|.+.|+++|
T Consensus 126 ~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~----~~l~~~i~~lL 183 (183)
T 2obi_A 126 AHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEP----LVIEKDLPHYF 183 (183)
T ss_dssp SCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECTTSCT----HHHHTTSGGGC
T ss_pred hhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCCCCCH----HHHHHHHHHhC
Confidence 1 2 1 2 66899999999998887 77888777654
No 179
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.30 E-value=1.6e-11 Score=88.70 Aligned_cols=87 Identities=8% Similarity=0.067 Sum_probs=69.0
Q ss_pred CCC-cEEEEEe-CCCChhhhhhhHHHHHHHHHhcC-CeEEEEEEcCCC----------------------hHHHHHhcCe
Q 030114 96 LSQ-PILIDWM-ASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNKV----------------------SKDLVKRGNI 150 (183)
Q Consensus 96 ~~k-~vlv~F~-a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~d~~----------------------~~~~~~~~~i 150 (183)
.++ +++|+|| ++||++|+...|.|.++++++++ ++.++.|++|.. ...+++.|++
T Consensus 34 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v 113 (160)
T 1xvw_A 34 RGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYGV 113 (160)
T ss_dssp TTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTTC
T ss_pred cCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcCC
Confidence 455 9999998 99999999999999999999964 599999998741 2237788876
Q ss_pred E-------------EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 151 S-------------IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 151 ~-------------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
. ++++|+++.++.|..+.....+++.+.|+++
T Consensus 114 ~~~~~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 158 (160)
T 1xvw_A 114 FNEQAGIANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDALAAL 158 (160)
T ss_dssp EETTTTEECSEEEEECTTSBEEEEEECCTTCCCCHHHHHHHHHHT
T ss_pred ccccCCCeeeeEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 2 6689999999999876544556777776653
No 180
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=99.27 E-value=1.1e-11 Score=92.13 Aligned_cols=43 Identities=19% Similarity=0.094 Sum_probs=39.8
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcC-CeEEEEEEcC
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVN 138 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~d 138 (183)
.+++++|+||++||++|+...|.|.++++++++ ++.++.|++|
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d 91 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCN 91 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECc
Confidence 679999999999999999999999999999975 4999999886
No 181
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=98.91 E-value=4.8e-13 Score=96.73 Aligned_cols=81 Identities=16% Similarity=0.315 Sum_probs=60.3
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHH-HHHHhc--CCeEEEEEEcCCChHH---HH------------------HhcC--
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEK-LAAEFD--TKLKFYYVDVNKVSKD---LV------------------KRGN-- 149 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~-la~~~~--~~v~~~~vd~d~~~~~---~~------------------~~~~-- 149 (183)
.+++++|+||++||++|+.+.|.|.+ ++++++ .++.++.|+++..++. +. +.|+
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 111 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADIFAKYALR 111 (159)
Confidence 67899999999999999999999998 888875 4699999998876431 12 2222
Q ss_pred eE-------EeeCCeEEEEEecCcchhhHHHHHHHHHHh
Q 030114 150 IS-------IWKDGEMKSEVIGGHKAWLVIEEVREMIKK 181 (183)
Q Consensus 150 i~-------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~ 181 (183)
+. +.++|+++.++.|... +++.++|++
T Consensus 112 ~~~~P~~~lid~~G~i~~~~~g~~~-----~~l~~~l~~ 145 (159)
T 2ls5_A 112 DAGITRNVLIDREGKIVKLTRLYNE-----EEFASLVQQ 145 (159)
Confidence 22 4589999998888544 455555543
No 182
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.26 E-value=3e-11 Score=103.56 Aligned_cols=78 Identities=13% Similarity=0.208 Sum_probs=67.8
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE----EeeCCeEEEEEecCcchhhH
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS----IWKDGEMKSEVIGGHKAWLV 171 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~----~~~~Gk~v~~~~G~~~~~~~ 171 (183)
.++..++.||++||++|+.+.|.+++++.++ +++.+..+|++..++ ++++|+|. ++.||+.+.+ |..+.
T Consensus 116 ~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~-~~v~~~~vd~~~~~~-~~~~~~i~svPt~~i~g~~~~~--G~~~~--- 188 (521)
T 1hyu_A 116 DGDFEFETYYSLSCHNCPDVVQALNLMAVLN-PRIKHTAIDGGTFQN-EITERNVMGVPAVFVNGKEFGQ--GRMTL--- 188 (521)
T ss_dssp CSCEEEEEEECTTCSSHHHHHHHHHHHHHHC-TTEEEEEEETTTCHH-HHHHTTCCSSSEEEETTEEEEE--SCCCH---
T ss_pred CCCcceEEEECCCCcCcHHHHHHHHHHHhHc-CceEEEEEechhhHH-HHHHhCCCccCEEEECCEEEec--CCCCH---
Confidence 4667899999999999999999999999998 589999999999998 99999998 6669998865 88887
Q ss_pred HHHHHHHHHh
Q 030114 172 IEEVREMIKK 181 (183)
Q Consensus 172 ~~~l~~~i~~ 181 (183)
++|.+++++
T Consensus 189 -~~l~~~l~~ 197 (521)
T 1hyu_A 189 -TEIVAKVDT 197 (521)
T ss_dssp -HHHHHHHCC
T ss_pred -HHHHHHHhh
Confidence 777776643
No 183
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.26 E-value=1.1e-11 Score=96.49 Aligned_cols=94 Identities=17% Similarity=0.175 Sum_probs=75.8
Q ss_pred ceEecCCchhHHHHHHHhhhCCCcEEEEEeCCC--ChhhhhhhHHHHHHHHHhcCC------eEEEEEEcCCChHHHHHh
Q 030114 76 ELEPINDSDHLDQILLRAQELSQPILIDWMASW--CRKCIYLKPKLEKLAAEFDTK------LKFYYVDVNKVSKDLVKR 147 (183)
Q Consensus 76 ~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~w--C~~C~~~~p~l~~la~~~~~~------v~~~~vd~d~~~~~~~~~ 147 (183)
.+.+..+.+++.+.+. .-.++++|.||++| |++|+.+.|.++++++.+ ++ +.|+.+|++++++ ++++
T Consensus 7 ~~~~~~~~~ql~~~~~---~~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~-~~~~~~~~v~~~~vd~d~~~~-~~~~ 81 (243)
T 2hls_A 7 LDLSEDFRRELRETLA---EMVNPVEVHVFLSKSGCETCEDTLRLMKLFEEES-PTRNGGKLLKLNVYYRESDSD-KFSE 81 (243)
T ss_dssp CCCCHHHHHHHHHHHT---TCCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHS-CEETTEESEEEEEEETTTTHH-HHHH
T ss_pred hhCCHHHHHHHHHHHH---hCCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhc-cCCCCCceeEEEEecCCcCHH-HHHh
Confidence 3445666778888883 35689999999999 999999999999999985 44 9999999999987 9999
Q ss_pred cCeE------EeeCCeEEEEEecCcchhhHHHHHHHHHHh
Q 030114 148 GNIS------IWKDGEMKSEVIGGHKAWLVIEEVREMIKK 181 (183)
Q Consensus 148 ~~i~------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~ 181 (183)
|+|+ ++ +| ..++.|..+. +++..+++.
T Consensus 82 ~gv~~~Pt~~i~-~g--~~~~~G~~~~----~~l~~fv~~ 114 (243)
T 2hls_A 82 FKVERVPTVAFL-GG--EVRWTGIPAG----EEIRALVEV 114 (243)
T ss_dssp TTCCSSSEEEET-TT--TEEEESCCCT----THHHHHHHH
T ss_pred cCCCcCCEEEEE-CC--ceeEcCCCcH----HHHHHHHHH
Confidence 9998 55 67 6788898876 455555443
No 184
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.25 E-value=2.1e-11 Score=91.50 Aligned_cols=86 Identities=13% Similarity=0.178 Sum_probs=67.0
Q ss_pred CCCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcC-CeEEEEEEcCCC---------------------------hHHHHH
Q 030114 96 LSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNKV---------------------------SKDLVK 146 (183)
Q Consensus 96 ~~k~vlv~F~-a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~d~~---------------------------~~~~~~ 146 (183)
.+++++|+|| ++||++|+...|.|.++++++++ ++.++.|++|.. ...+++
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISR 111 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHHH
Confidence 5799999999 99999999999999999999864 599999998741 123777
Q ss_pred hcCe------E------EeeCCeEEEEEecCcchhhHHHHHHHHHHh
Q 030114 147 RGNI------S------IWKDGEMKSEVIGGHKAWLVIEEVREMIKK 181 (183)
Q Consensus 147 ~~~i------~------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~ 181 (183)
.|++ . +.++|+++.++.|..+.....++|.+.|++
T Consensus 112 ~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 158 (198)
T 1zof_A 112 DYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDA 158 (198)
T ss_dssp HTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHH
T ss_pred HhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHH
Confidence 8876 3 568999999999876332233666666554
No 185
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.90 E-value=5.7e-13 Score=94.27 Aligned_cols=67 Identities=21% Similarity=0.409 Sum_probs=54.7
Q ss_pred CCC-cEEEEEeCCCChhhhhhhHHHHHHHHHhc---CCeEEEEEEcCCCh------------------------HHHHHh
Q 030114 96 LSQ-PILIDWMASWCRKCIYLKPKLEKLAAEFD---TKLKFYYVDVNKVS------------------------KDLVKR 147 (183)
Q Consensus 96 ~~k-~vlv~F~a~wC~~C~~~~p~l~~la~~~~---~~v~~~~vd~d~~~------------------------~~~~~~ 147 (183)
.++ +++|+||++||++|+.+.|.+.+++++++ +++.++.|+++..+ ..+++.
T Consensus 24 ~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (143)
T 2lus_A 24 KDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAK 103 (143)
Confidence 456 99999999999999999999999999983 46889999888653 237778
Q ss_pred cCeE-------EeeCCeEEEEE
Q 030114 148 GNIS-------IWKDGEMKSEV 162 (183)
Q Consensus 148 ~~i~-------~~~~Gk~v~~~ 162 (183)
|+|. +.++|+++.+.
T Consensus 104 ~~v~~~P~~~lid~~G~i~~~~ 125 (143)
T 2lus_A 104 YGITGIPALVIVKKDGTLISMN 125 (143)
Confidence 8887 44689988764
No 186
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=99.23 E-value=1.4e-12 Score=103.94 Aligned_cols=67 Identities=16% Similarity=0.208 Sum_probs=54.4
Q ss_pred EEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcC------CChHHHHHhcCeE----EeeCCeEEEEEecCcchh
Q 030114 100 ILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN------KVSKDLVKRGNIS----IWKDGEMKSEVIGGHKAW 169 (183)
Q Consensus 100 vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d------~~~~~~~~~~~i~----~~~~Gk~v~~~~G~~~~~ 169 (183)
.+++|||||||||+.+.|.++++++++ + ++|++ ++++ ++++++|+ ++.||+. +.|..+.
T Consensus 200 ~vV~F~A~WC~~Ck~l~p~le~lA~~l-~-----~Vd~d~~d~~~~~~~-la~~~gI~~vPT~~i~G~~---~~G~~~~- 268 (291)
T 3kp9_A 200 GGTMYGAYWCPHCQDQKELFGAAFDQV-P-----YVECSPNGPGTPQAQ-ECTEAGITSYPTWIINGRT---YTGVRSL- 268 (291)
T ss_dssp TCEEEECTTCHHHHHHHHHHGGGGGGS-C-----EEESCSSCSSSCCCH-HHHTTTCCSTTEEEETTEE---EESCCCH-
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHc-C-----EEEEeecCchhhHHH-HHHHcCCcccCeEEECCEE---ecCCCCH-
Confidence 479999999999999999999998776 2 34444 2555 99999999 7779974 8899998
Q ss_pred hHHHHHHHHHH
Q 030114 170 LVIEEVREMIK 180 (183)
Q Consensus 170 ~~~~~l~~~i~ 180 (183)
++|.++++
T Consensus 269 ---~~L~~~l~ 276 (291)
T 3kp9_A 269 ---EALAVASG 276 (291)
T ss_dssp ---HHHHHHTC
T ss_pred ---HHHHHHHC
Confidence 88888764
No 187
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.23 E-value=5.1e-11 Score=89.78 Aligned_cols=87 Identities=15% Similarity=0.197 Sum_probs=68.3
Q ss_pred CCCcEEEEEeCCCChh-hhhhhHHHHHHHHHhc----CCeEEEEEEcCC---Ch------------------------HH
Q 030114 96 LSQPILIDWMASWCRK-CIYLKPKLEKLAAEFD----TKLKFYYVDVNK---VS------------------------KD 143 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~-C~~~~p~l~~la~~~~----~~v~~~~vd~d~---~~------------------------~~ 143 (183)
.++++||+||++||++ |....|.|.+++++++ +++.++.|++|. .+ ..
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~ 119 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFDEVKN 119 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTSCTTCEEEECCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHcCCCceEEeCCHHHHHH
Confidence 6899999999999998 9999999999877763 479999999873 11 12
Q ss_pred HHHhcCe--------------------E---EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 144 LVKRGNI--------------------S---IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 144 ~~~~~~i--------------------~---~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
+++.|+| . |+++|+++.++.|..+.+.+.+.|.+.|+.+
T Consensus 120 ~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~~~~~~~~~i~~~l~~l 181 (200)
T 2b7k_A 120 ACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNYDEKTGVDKIVEHVKSY 181 (200)
T ss_dssp HHHHTTC--------------CTTTCCCEEEECTTSCEEEEECTTCCTTHHHHHHHHHHHHC
T ss_pred HHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCCCHHHHHHHHHHHHHHh
Confidence 5555554 1 6689999999999888777778888877653
No 188
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.22 E-value=2.9e-11 Score=89.94 Aligned_cols=71 Identities=17% Similarity=0.236 Sum_probs=59.4
Q ss_pred CCCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcC-CeEEEEEEcCCC------------------------hHHHHHhcC
Q 030114 96 LSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNKV------------------------SKDLVKRGN 149 (183)
Q Consensus 96 ~~k~vlv~F~-a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~d~~------------------------~~~~~~~~~ 149 (183)
.++++||+|| ++||++|+...|.|.++++++++ ++.++.|++|.. ...+++.|+
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 109 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFD 109 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTT
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHhC
Confidence 5799999999 99999999999999999999864 699999998851 123677777
Q ss_pred e-------E------EeeCCeEEEEEecCc
Q 030114 150 I-------S------IWKDGEMKSEVIGGH 166 (183)
Q Consensus 150 i-------~------~~~~Gk~v~~~~G~~ 166 (183)
+ . +.++|+++.++.|..
T Consensus 110 v~~~~~g~~~P~~~lid~~G~i~~~~~g~~ 139 (187)
T 1we0_A 110 VLNEETGLADRGTFIIDPDGVIQAIEINAD 139 (187)
T ss_dssp CEETTTTEECEEEEEECTTSBEEEEEEECT
T ss_pred CCcCCCCceeeEEEEECCCCeEEEEEecCC
Confidence 6 2 558999999999875
No 189
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.20 E-value=5.4e-11 Score=89.14 Aligned_cols=86 Identities=12% Similarity=0.171 Sum_probs=65.3
Q ss_pred CCCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcC-CeEEEEEEcCCC------------------------hHHHHHhcC
Q 030114 96 LSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNKV------------------------SKDLVKRGN 149 (183)
Q Consensus 96 ~~k~vlv~F~-a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~d~~------------------------~~~~~~~~~ 149 (183)
.++++||+|| ++||++|+...|.|.+++++|++ ++.++.|++|.. ...+++.|+
T Consensus 44 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 123 (195)
T 2bmx_A 44 PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAG 123 (195)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHT
T ss_pred CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhC
Confidence 5789999999 99999999999999999999965 699999998751 113566665
Q ss_pred e------E------EeeCCeEEEEEecCcchhhHHHHHHHHHHh
Q 030114 150 I------S------IWKDGEMKSEVIGGHKAWLVIEEVREMIKK 181 (183)
Q Consensus 150 i------~------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~ 181 (183)
+ . +.++|+++.++.|..+.....++|.+.|++
T Consensus 124 v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 167 (195)
T 2bmx_A 124 VLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDA 167 (195)
T ss_dssp CBCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHH
T ss_pred CcccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 4 2 558999999999876322223566666554
No 190
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.19 E-value=1.1e-10 Score=87.51 Aligned_cols=86 Identities=9% Similarity=0.079 Sum_probs=66.4
Q ss_pred CCCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcC-CeEEEEEEcCCCh---------------------------HHHHH
Q 030114 96 LSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNKVS---------------------------KDLVK 146 (183)
Q Consensus 96 ~~k~vlv~F~-a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~d~~~---------------------------~~~~~ 146 (183)
.++++||+|| ++||++|..+.|.|.+++++|++ ++.++.|++|... ..+++
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 112 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSE 112 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHHH
Confidence 5789999999 99999999999999999999865 5999999997421 13677
Q ss_pred hcCeE-------------EeeCCeEEEEEecCcchhhHHHHHHHHHHh
Q 030114 147 RGNIS-------------IWKDGEMKSEVIGGHKAWLVIEEVREMIKK 181 (183)
Q Consensus 147 ~~~i~-------------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~ 181 (183)
.|++. ++++|+++.++.|..+.+...+++.+.|+.
T Consensus 113 ~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~ 160 (197)
T 1qmv_A 113 DYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQA 160 (197)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred HcCCccCCCCceeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHh
Confidence 77763 568999999999876533333555555543
No 191
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.19 E-value=2.2e-10 Score=83.32 Aligned_cols=70 Identities=10% Similarity=0.117 Sum_probs=58.1
Q ss_pred CCCcEEEEEeCCC-ChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCC----------------------hHHHHHhcCeE-
Q 030114 96 LSQPILIDWMASW-CRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKV----------------------SKDLVKRGNIS- 151 (183)
Q Consensus 96 ~~k~vlv~F~a~w-C~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~----------------------~~~~~~~~~i~- 151 (183)
.+++++|+||++| |++|+...|.+.++++++ +++.++.|+.|.. ...+.+.|++.
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v~~ 121 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-GDVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGVYI 121 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-SSCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTCBB
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-CCCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhCCcc
Confidence 5789999999999 999999999999999999 8899999998741 12366677642
Q ss_pred ------------EeeCCeEEEEEecCc
Q 030114 152 ------------IWKDGEMKSEVIGGH 166 (183)
Q Consensus 152 ------------~~~~Gk~v~~~~G~~ 166 (183)
+.++|+++.++.|..
T Consensus 122 ~~~g~~~p~~~lid~~G~i~~~~~g~~ 148 (167)
T 2jsy_A 122 KELRLLARSVFVLDENGKVVYAEYVSE 148 (167)
T ss_dssp TTTCSBCCEEEEECTTSCEEEEEECSB
T ss_pred ccCCceeeEEEEEcCCCcEEEEEecCC
Confidence 668999999998753
No 192
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=99.18 E-value=4.7e-11 Score=77.37 Aligned_cols=70 Identities=24% Similarity=0.421 Sum_probs=56.2
Q ss_pred EEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCCh---HHHHHhcC--eE----EeeCCeEEEEEecCcchhhH
Q 030114 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVS---KDLVKRGN--IS----IWKDGEMKSEVIGGHKAWLV 171 (183)
Q Consensus 101 lv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~---~~~~~~~~--i~----~~~~Gk~v~~~~G~~~~~~~ 171 (183)
++.|+++||++|+.+.+.|+++++++ .++.+..+|++.++ +.+.++++ +. ++.+|+.+. |.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~-~~i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i~~~g~~i~---~~------ 72 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNER-DDFQYQYVDIRAEGITKEDLQQKAGKPVETVPQIFVDQQHIG---GY------ 72 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHH-SSCEEEEECHHHHTCCSHHHHHHTCCCSCCSCEEEETTEEEE---SS------
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcC-CCceEEEEecccChHHHHHHHHHhCCCCceeCeEEECCEEEE---CH------
Confidence 67899999999999999999999987 56999999997654 24888888 65 888997642 43
Q ss_pred HHHHHHHHHh
Q 030114 172 IEEVREMIKK 181 (183)
Q Consensus 172 ~~~l~~~i~~ 181 (183)
++|.+++++
T Consensus 73 -~~l~~~~~~ 81 (85)
T 1ego_A 73 -TDFAAWVKE 81 (85)
T ss_dssp -HHHHHHHHH
T ss_pred -HHHHHHHHH
Confidence 567777765
No 193
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.18 E-value=4.6e-11 Score=97.38 Aligned_cols=97 Identities=11% Similarity=0.151 Sum_probs=75.3
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcC--CChHHHHHhcCeE---
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN--KVSKDLVKRGNIS--- 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d--~~~~~~~~~~~i~--- 151 (183)
+.++ +.+++...+. ...++++|.||++||++|+.+.|.|+++++++++++.|+.+|++ ..+. +++.|+|.
T Consensus 119 v~~~-~~~~~~~~~~---~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~i~f~~vd~~~~~~~~-~~~~fgi~~~~ 193 (361)
T 3uem_A 119 VIEF-TEQTAPKIFG---GEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTDNQR-ILEFFGLKKEE 193 (361)
T ss_dssp EEEC-STTTHHHHHS---CSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTTCEEEEECTTSGGGHH-HHHHTTCCTTT
T ss_pred ceec-CcccHHHHhc---CCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccCceEEEEecCChHHHHH-HHHHcCCCccC
Confidence 3444 4667777772 33457899999999999999999999999999889999999999 4565 99999986
Q ss_pred -----EeeCCeEEEEEe---cCcchhhHHHHHHHHHHhh
Q 030114 152 -----IWKDGEMKSEVI---GGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 -----~~~~Gk~v~~~~---G~~~~~~~~~~l~~~i~~~ 182 (183)
++..|+...++. |..+. +.|.+|++++
T Consensus 194 ~P~~~~~~~~~~~~ky~~~~~~~~~----~~l~~fi~~~ 228 (361)
T 3uem_A 194 CPAVRLITLEEEMTKYKPESEELTA----ERITEFCHRF 228 (361)
T ss_dssp CSEEEEEECC--CCEECCSSCCCCH----HHHHHHHHHH
T ss_pred CccEEEEEcCCcccccCCCccccCH----HHHHHHHHHH
Confidence 666666555665 66666 7888888764
No 194
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.17 E-value=1.5e-10 Score=87.19 Aligned_cols=86 Identities=9% Similarity=0.104 Sum_probs=65.9
Q ss_pred CCCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcC-CeEEEEEEcCCC---------------------------hHHHHH
Q 030114 96 LSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNKV---------------------------SKDLVK 146 (183)
Q Consensus 96 ~~k~vlv~F~-a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~d~~---------------------------~~~~~~ 146 (183)
.++++||+|| ++||++|....|.|.+++++|++ ++.++.|++|.. ...+++
T Consensus 35 ~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 114 (202)
T 1uul_A 35 KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMK 114 (202)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHH
Confidence 5789999999 99999999999999999999965 599999998741 113666
Q ss_pred hcCeE-------------EeeCCeEEEEEecCcchhhHHHHHHHHHHh
Q 030114 147 RGNIS-------------IWKDGEMKSEVIGGHKAWLVIEEVREMIKK 181 (183)
Q Consensus 147 ~~~i~-------------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~ 181 (183)
.|++. +.++|+++.++.|..+.+...+++.+.|+.
T Consensus 115 ~ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~ 162 (202)
T 1uul_A 115 SYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKA 162 (202)
T ss_dssp HHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred HcCCccCCCCceeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHH
Confidence 77653 568999999988876543333555555543
No 195
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=99.16 E-value=1.4e-10 Score=88.76 Aligned_cols=42 Identities=24% Similarity=0.334 Sum_probs=38.4
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcC-CeEEEEEEcC
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVN 138 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~d 138 (183)
.+++|||+|||+||++|+ ..|.|++++++|++ ++.++.|+++
T Consensus 55 ~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d 97 (215)
T 2i3y_A 55 VGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCN 97 (215)
T ss_dssp TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEcc
Confidence 689999999999999999 89999999999965 5999999875
No 196
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.15 E-value=1.8e-10 Score=88.27 Aligned_cols=85 Identities=9% Similarity=0.151 Sum_probs=66.5
Q ss_pred CCCcEEEEEeC-CCChhhhhhhHHHHHHHHHhcC-CeEEEEEEcCCCh---------------------------HHHHH
Q 030114 96 LSQPILIDWMA-SWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNKVS---------------------------KDLVK 146 (183)
Q Consensus 96 ~~k~vlv~F~a-~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~d~~~---------------------------~~~~~ 146 (183)
.++++||+||+ +||++|....|.|.+++++|++ ++.++.|++|... ..+++
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 147 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISK 147 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHHH
Confidence 57899999996 9999999999999999999965 4999999998521 12556
Q ss_pred hcCeE-------------EeeCCeEEEEEecCcchhhHHHHHHHHHH
Q 030114 147 RGNIS-------------IWKDGEMKSEVIGGHKAWLVIEEVREMIK 180 (183)
Q Consensus 147 ~~~i~-------------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~ 180 (183)
.|++. |+++|+++.++.|..+.....+++.+.|+
T Consensus 148 ~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~~il~~l~ 194 (222)
T 3ztl_A 148 AYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLD 194 (222)
T ss_dssp HTTCBCTTTSSBCEEEEEECTTSEEEEEEEECTTBCCCHHHHHHHHH
T ss_pred HcCCeecCCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHH
Confidence 66652 66899999999988665444556665554
No 197
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.12 E-value=2.5e-10 Score=83.26 Aligned_cols=43 Identities=14% Similarity=0.357 Sum_probs=39.2
Q ss_pred CCCcEEEEEeCCCCh-hhhhhhHHHHHHHHHhcC---CeEEEEEEcC
Q 030114 96 LSQPILIDWMASWCR-KCIYLKPKLEKLAAEFDT---KLKFYYVDVN 138 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~-~C~~~~p~l~~la~~~~~---~v~~~~vd~d 138 (183)
.+++++|+||++||+ +|....|.|.++++++++ ++.++.|++|
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d 78 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVD 78 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESC
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeC
Confidence 689999999999999 999999999999998853 4999999987
No 198
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.11 E-value=4.1e-10 Score=84.04 Aligned_cols=86 Identities=15% Similarity=0.220 Sum_probs=65.6
Q ss_pred CCCcEEEEEe-CCCChhhhhhhHHHHHHHHHhc-CCeEEEEEEcCCC---------------------------hHHHHH
Q 030114 96 LSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFD-TKLKFYYVDVNKV---------------------------SKDLVK 146 (183)
Q Consensus 96 ~~k~vlv~F~-a~wC~~C~~~~p~l~~la~~~~-~~v~~~~vd~d~~---------------------------~~~~~~ 146 (183)
.++++||+|| ++||++|....|.|.+++++|+ .++.++.|++|.. ...+++
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 109 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIAR 109 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHHH
Confidence 5789999999 9999999999999999999986 4699999998741 113677
Q ss_pred hcCe------E------EeeCCeEEEEEecCcchhhHHHHHHHHHHh
Q 030114 147 RGNI------S------IWKDGEMKSEVIGGHKAWLVIEEVREMIKK 181 (183)
Q Consensus 147 ~~~i------~------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~ 181 (183)
.|++ . +.++|+++.+..|..+.....+++.+.|+.
T Consensus 110 ~~gv~~~~g~~~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 156 (192)
T 2h01_A 110 SYDVLFNESVALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDA 156 (192)
T ss_dssp HTTCEETTTEECCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHH
T ss_pred HhCCcCcCCceeeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHH
Confidence 7776 2 558999999998865433333555555543
No 199
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=99.10 E-value=5.5e-11 Score=76.58 Aligned_cols=63 Identities=8% Similarity=0.098 Sum_probs=47.6
Q ss_pred EEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcC-CChHHHHHhcCeE----EeeCCeEEEEEecCc
Q 030114 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN-KVSKDLVKRGNIS----IWKDGEMKSEVIGGH 166 (183)
Q Consensus 101 lv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d-~~~~~~~~~~~i~----~~~~Gk~v~~~~G~~ 166 (183)
++.||++||++|+.+.|.++++.++++.++.++.+|.+ +..+ ++++++++ ++.||+.+. .|..
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~gv~~vPt~~i~g~~~~--~G~~ 71 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPSKYTVEIVHLGTDKARIA-EAEKAGVKSVPALVIDGAAFH--INFG 71 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTTTEEEEEEETTTCSSTHH-HHHHHTCCEEEEEEETTEEEE--EEEE
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhcCCeEEEEEecCChhhHH-HHHHcCCCcCCEEEECCEEEE--eccC
Confidence 67799999999999999999998877445666666554 3455 78899987 556998754 5543
No 200
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.10 E-value=4e-10 Score=86.22 Aligned_cols=86 Identities=15% Similarity=0.176 Sum_probs=65.8
Q ss_pred CCCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcC-CeEEEEEEcCCC---------------------------hHHHHH
Q 030114 96 LSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNKV---------------------------SKDLVK 146 (183)
Q Consensus 96 ~~k~vlv~F~-a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~d~~---------------------------~~~~~~ 146 (183)
.++++||+|| ++||++|+...|.|.+++++|++ ++.++.|++|.. ...+++
T Consensus 55 ~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~ 134 (220)
T 1zye_A 55 KGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISR 134 (220)
T ss_dssp TTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHH
Confidence 5699999999 99999999999999999999864 699999998741 123777
Q ss_pred hcCeE-------------EeeCCeEEEEEecCcchhhHHHHHHHHHHh
Q 030114 147 RGNIS-------------IWKDGEMKSEVIGGHKAWLVIEEVREMIKK 181 (183)
Q Consensus 147 ~~~i~-------------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~ 181 (183)
.|++. |.++|+++.+..|..+.....+++.+.|+.
T Consensus 135 ~ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~ 182 (220)
T 1zye_A 135 DYGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKA 182 (220)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHH
T ss_pred HhCCeecCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHH
Confidence 77762 558999999988875443333555555543
No 201
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=99.09 E-value=4.7e-10 Score=85.28 Aligned_cols=42 Identities=19% Similarity=0.081 Sum_probs=37.9
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcC-CeEEEEEEcC
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVN 138 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~d 138 (183)
.+++|||+|||+||++| ...|.|++++++|++ ++.++.|+++
T Consensus 37 kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d 79 (207)
T 2r37_A 37 AGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCN 79 (207)
T ss_dssp TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECc
Confidence 68999999999999999 689999999999965 5999999865
No 202
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.08 E-value=6.1e-10 Score=84.86 Aligned_cols=85 Identities=16% Similarity=0.212 Sum_probs=63.9
Q ss_pred CCCcEEEEEe-CCCChhhhhhhHHHHHHHHHhc-CCeEEEEEEcCCC---------------------------hHHHHH
Q 030114 96 LSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFD-TKLKFYYVDVNKV---------------------------SKDLVK 146 (183)
Q Consensus 96 ~~k~vlv~F~-a~wC~~C~~~~p~l~~la~~~~-~~v~~~~vd~d~~---------------------------~~~~~~ 146 (183)
.++++||+|| ++||++|....|.|.+++++|+ .++.++.|++|.. ...+++
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 130 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISK 130 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHHH
Confidence 6789999999 9999999999999999999986 4699999998741 113667
Q ss_pred hcCe------E------EeeCCeEEEEEecCcchhhHHHHHHHHHH
Q 030114 147 RGNI------S------IWKDGEMKSEVIGGHKAWLVIEEVREMIK 180 (183)
Q Consensus 147 ~~~i------~------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~ 180 (183)
.|++ . |+++|+++.+..|..+.....+++.+.|+
T Consensus 131 ~ygv~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~ 176 (213)
T 2i81_A 131 DYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIID 176 (213)
T ss_dssp HTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHH
T ss_pred HhCCccccCCcccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHH
Confidence 7765 2 56899999998886542122245554444
No 203
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.04 E-value=1.8e-09 Score=78.07 Aligned_cols=86 Identities=15% Similarity=0.108 Sum_probs=64.1
Q ss_pred CCCcEEEEEeC-CCChhhhhhhHHHHHHHHHhcC-CeEEEEEEcCCCh--------------------HHHHHhcCeE--
Q 030114 96 LSQPILIDWMA-SWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNKVS--------------------KDLVKRGNIS-- 151 (183)
Q Consensus 96 ~~k~vlv~F~a-~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~d~~~--------------------~~~~~~~~i~-- 151 (183)
.+++++|+||+ +||++|....|.|.+++++|++ ++.++.|++|... ..+++.|++.
T Consensus 34 ~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 113 (163)
T 3gkn_A 34 AGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKE 113 (163)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCEEE
T ss_pred CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCccc
Confidence 57799999998 9999999999999999999864 5999999987321 1255566651
Q ss_pred -----------------EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 -----------------IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 -----------------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
+.++|+++..+.|.... ...+++.+.|++.
T Consensus 114 ~~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~~-~~~~~il~~l~~l 160 (163)
T 3gkn_A 114 KNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVA-GHADAVLAALKAH 160 (163)
T ss_dssp EEETTEEEEEECCEEEEECTTSCEEEEECSCCST-THHHHHHHHHHHH
T ss_pred cccccccccCcceEEEEECCCCeEEEEEcCCCcc-cCHHHHHHHHHHH
Confidence 56899999888655443 4456666666543
No 204
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.02 E-value=6.5e-10 Score=81.86 Aligned_cols=67 Identities=13% Similarity=0.154 Sum_probs=55.3
Q ss_pred CCCcEEEEEeCCC-ChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCC---------------------hHHHHHhcCe---
Q 030114 96 LSQPILIDWMASW-CRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKV---------------------SKDLVKRGNI--- 150 (183)
Q Consensus 96 ~~k~vlv~F~a~w-C~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~---------------------~~~~~~~~~i--- 150 (183)
.++++||+||++| |++|+...|.|.+++++ .++.++.|+.|.. ...+++.|++
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~--~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~ 120 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSVRTFDERAAA--SGATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFGEDYGVTIA 120 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH--TTCEEEEEESSCHHHHTTCC------CEEEEECTTSSHHHHTTCBBC
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh--cCCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHHHHhCCccc
Confidence 5789999999999 99999999999999988 6799999998721 1236777776
Q ss_pred ----------E---EeeCCeEEEEEec
Q 030114 151 ----------S---IWKDGEMKSEVIG 164 (183)
Q Consensus 151 ----------~---~~~~Gk~v~~~~G 164 (183)
. ++++|+++.++.|
T Consensus 121 ~~~~~g~~~p~~~lid~~G~I~~~~~g 147 (175)
T 1xvq_A 121 DGPMAGLLARAIVVIGADGNVAYTELV 147 (175)
T ss_dssp SSTTTTSBCSEEEEECTTSBEEEEEEC
T ss_pred ccccCCcccceEEEECCCCeEEEEEEC
Confidence 1 6689999999875
No 205
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.00 E-value=2.4e-10 Score=83.63 Aligned_cols=78 Identities=14% Similarity=0.284 Sum_probs=60.2
Q ss_pred hHHHHHHHhhhCCCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcC-CeEEEEEEcCCCh--------------------H
Q 030114 85 HLDQILLRAQELSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNKVS--------------------K 142 (183)
Q Consensus 85 ~~~~~l~~a~~~~k~vlv~F~-a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~d~~~--------------------~ 142 (183)
.+.+.. .+++++++.|| ++||++|....|.|.++++++++ ++.++.|+.|... .
T Consensus 25 ~Lsd~~----~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~fp~l~D~~~ 100 (164)
T 4gqc_A 25 NLYEVL----KRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCLKKFKDENRLAFNLLSDYNR 100 (164)
T ss_dssp EHHHHH----HTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTS
T ss_pred EHHHHh----cCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHHHHHHHHhcCcccceeecCch
Confidence 355555 47899999998 99999999999999999998854 5899999887431 1
Q ss_pred HHHHhcCeE-----------------EeeCCeEEEEEecCc
Q 030114 143 DLVKRGNIS-----------------IWKDGEMKSEVIGGH 166 (183)
Q Consensus 143 ~~~~~~~i~-----------------~~~~Gk~v~~~~G~~ 166 (183)
.+++.||+. +.++|+++..+++..
T Consensus 101 ~v~~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~ 141 (164)
T 4gqc_A 101 EVIKLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYKWVTDN 141 (164)
T ss_dssp HHHHHTTCEEEEETTEEEEECCEEEEECTTSBEEEEEECSC
T ss_pred HHHHHcCCcccccccCcCCeeeEEEEECCCCEEEEEEEeCC
Confidence 366677762 568999988877654
No 206
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=98.98 E-value=1e-08 Score=73.89 Aligned_cols=84 Identities=12% Similarity=0.082 Sum_probs=61.4
Q ss_pred CCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCCh--------------------HHHHHhcCe-----
Q 030114 97 SQPILIDWM-ASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVS--------------------KDLVKRGNI----- 150 (183)
Q Consensus 97 ~k~vlv~F~-a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~--------------------~~~~~~~~i----- 150 (183)
+++++|+|| ++||++|....|.|.+++++++++-.++.|+.|... ..+++.|++
T Consensus 35 ~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~p~ 114 (159)
T 2a4v_A 35 NRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYAAVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLGAKKTPL 114 (159)
T ss_dssp CSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTCEEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHHHTCBSSSS
T ss_pred CCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHHhCCccccc
Confidence 347899987 999999999999999999998642288888876321 125666665
Q ss_pred -----E---EeeCCeEEEEEecCcch---hhHHHHHHHHHHh
Q 030114 151 -----S---IWKDGEMKSEVIGGHKA---WLVIEEVREMIKK 181 (183)
Q Consensus 151 -----~---~~~~Gk~v~~~~G~~~~---~~~~~~l~~~i~~ 181 (183)
. + ++|+++.++.|..+. +...++|.+.+++
T Consensus 115 ~g~~~~~~li-~~G~i~~~~~g~~~~~~~~~~~~~l~~~l~~ 155 (159)
T 2a4v_A 115 SGSIRSHFIF-VDGKLKFKRVKISPEVSVNDAKKEVLEVAEK 155 (159)
T ss_dssp SCBCCEEEEE-ETTEEEEEEESCCHHHHHHHHHHHHHHHHHH
T ss_pred CCccceEEEE-cCCEEEEEEccCCccccHHHHHHHHHHHHHH
Confidence 2 6 999999999987654 3455556665554
No 207
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=98.97 E-value=6e-10 Score=80.78 Aligned_cols=86 Identities=15% Similarity=0.285 Sum_probs=59.1
Q ss_pred CCCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcC-CeEEEEEEcCCChH--------------------HHHHhcCeE--
Q 030114 96 LSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNKVSK--------------------DLVKRGNIS-- 151 (183)
Q Consensus 96 ~~k~vlv~F~-a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~d~~~~--------------------~~~~~~~i~-- 151 (183)
.+++++|+|| ++||++|....|.|.+++++++. ++.++.|+.|.... .+++.|++.
T Consensus 29 ~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~~~~~~~~~~~~~~p~l~D~~~~v~~~ygv~~~ 108 (157)
T 4g2e_A 29 KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAFKEHNKLNFTILSDYNREVVKKYNVAWE 108 (157)
T ss_dssp TTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCEEE
T ss_pred CCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchhHHHHHHHHcCCcEEEEEcCCcHHHHHcCCccc
Confidence 6899999999 99999999999999999988854 58899998874321 256667652
Q ss_pred ----------------EeeCCeEEEEEecCcch-hhHHHHHHHHHHh
Q 030114 152 ----------------IWKDGEMKSEVIGGHKA-WLVIEEVREMIKK 181 (183)
Q Consensus 152 ----------------~~~~Gk~v~~~~G~~~~-~~~~~~l~~~i~~ 181 (183)
+.++|+++.+.+|.... +...+++.+.|+.
T Consensus 109 ~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~ 155 (157)
T 4g2e_A 109 FPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKS 155 (157)
T ss_dssp CTTSTTCEEECEEEEEECTTSBEEEEEEESSTTCCCCHHHHHHHHHH
T ss_pred cccCCCcceeeeeEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHH
Confidence 56899998888775432 2334778777764
No 208
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=98.96 E-value=3.1e-09 Score=81.49 Aligned_cols=85 Identities=18% Similarity=0.212 Sum_probs=63.1
Q ss_pred CCCcEEEEEe-CCCChhhhhhhHHHHHHHHHhc-CCeEEEEEEcCCCh---------------------------HHHHH
Q 030114 96 LSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFD-TKLKFYYVDVNKVS---------------------------KDLVK 146 (183)
Q Consensus 96 ~~k~vlv~F~-a~wC~~C~~~~p~l~~la~~~~-~~v~~~~vd~d~~~---------------------------~~~~~ 146 (183)
.++++||+|| ++||++|....|.|.+++++|+ .++.++.|++|... ..+++
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 134 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDISK 134 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHHHH
Confidence 6789999999 9999999999999999999985 46999999886421 13566
Q ss_pred hcCe-----E-------EeeCCeEEEEEecCcchhhHHHHHHHHHH
Q 030114 147 RGNI-----S-------IWKDGEMKSEVIGGHKAWLVIEEVREMIK 180 (183)
Q Consensus 147 ~~~i-----~-------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~ 180 (183)
.|++ . |.++|+++....|..+.....+++.+.|+
T Consensus 135 ~ygv~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~ 180 (221)
T 2c0d_A 135 NYNVLYDNSFALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTID 180 (221)
T ss_dssp HTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHH
T ss_pred HcCCcccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHH
Confidence 7776 2 66889999998885432222245554444
No 209
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=98.95 E-value=9.3e-09 Score=75.96 Aligned_cols=85 Identities=14% Similarity=0.038 Sum_probs=63.0
Q ss_pred CCCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcC-CeEEEEEEcCCCh--------------------HHHHHhcCe---
Q 030114 96 LSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNKVS--------------------KDLVKRGNI--- 150 (183)
Q Consensus 96 ~~k~vlv~F~-a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~d~~~--------------------~~~~~~~~i--- 150 (183)
.+++++|.|| ++||++|....|.|.+++++|++ ++.++.|..|... ..+++.|++
T Consensus 50 ~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~gv~~~ 129 (179)
T 3ixr_A 50 TNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDAILCKAFDVIKE 129 (179)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTCHHHHHTTCEEE
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCceEEEECCchHHHHHcCCccc
Confidence 5789999998 99999999999999999999865 5899999887421 135666766
Q ss_pred --------------E--EeeCCeEEEEEecCcchhhHHHHHHHHHHh
Q 030114 151 --------------S--IWKDGEMKSEVIGGHKAWLVIEEVREMIKK 181 (183)
Q Consensus 151 --------------~--~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~ 181 (183)
. |.++|+++..+.+.... ...+++.+.|++
T Consensus 130 ~~~~g~~~~~~~p~~~lID~~G~I~~~~~~~~~~-~~~~~il~~l~~ 175 (179)
T 3ixr_A 130 KTMYGRQVIGIERSTFLIGPTHRIVEAWRQVKVP-GHAEEVLNKLKA 175 (179)
T ss_dssp ECCC--CEEEECCEEEEECTTSBEEEEECSCCST-THHHHHHHHHHH
T ss_pred ccccCcccCCcceEEEEECCCCEEEEEEcCCCCC-CCHHHHHHHHHH
Confidence 1 56889999888655443 334555555543
No 210
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=98.95 E-value=2.8e-09 Score=81.00 Aligned_cols=85 Identities=9% Similarity=0.119 Sum_probs=62.6
Q ss_pred CCCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcC-CeEEEEEEcCCCh---------------------------HHHHH
Q 030114 96 LSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNKVS---------------------------KDLVK 146 (183)
Q Consensus 96 ~~k~vlv~F~-a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~d~~~---------------------------~~~~~ 146 (183)
.++++||+|| ++||++|....|.|.+++++|++ ++.++.|++|... ..+++
T Consensus 47 ~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 126 (211)
T 2pn8_A 47 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 126 (211)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHHHH
Confidence 5789999999 99999999999999999999864 6999999886321 13556
Q ss_pred hcCe-------E------EeeCCeEEEEEecCcchhhHHHHHHHHHH
Q 030114 147 RGNI-------S------IWKDGEMKSEVIGGHKAWLVIEEVREMIK 180 (183)
Q Consensus 147 ~~~i-------~------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~ 180 (183)
.|++ . |.++|+++....|..+.+...+++.+.|+
T Consensus 127 ~ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~ 173 (211)
T 2pn8_A 127 DYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQ 173 (211)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHH
T ss_pred HcCCcccCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHH
Confidence 6666 1 56889999998876433222244444443
No 211
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=98.93 E-value=4.7e-09 Score=78.10 Aligned_cols=85 Identities=8% Similarity=-0.001 Sum_probs=60.4
Q ss_pred CCCcEEEEEeC-CCChhhhhhhHHHHHHHHHhcC-CeEEEEEEcCCChH------------------------HHHHhcC
Q 030114 96 LSQPILIDWMA-SWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNKVSK------------------------DLVKRGN 149 (183)
Q Consensus 96 ~~k~vlv~F~a-~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~d~~~~------------------------~~~~~~~ 149 (183)
.++++||+||+ +||++|....|.|.++++++++ ++.++.|+.|.... .+++.|+
T Consensus 29 ~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~yg 108 (186)
T 1n8j_A 29 EGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFD 108 (186)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHTT
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHHhC
Confidence 57899999995 9999999999999999999864 69999998874311 2344444
Q ss_pred e---------E----EeeCCeEEEEEecCcchhhHHHHHHHHHH
Q 030114 150 I---------S----IWKDGEMKSEVIGGHKAWLVIEEVREMIK 180 (183)
Q Consensus 150 i---------~----~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~ 180 (183)
+ . |.++|+++..+.|........+++.+.|+
T Consensus 109 v~~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~ 152 (186)
T 1n8j_A 109 NMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIK 152 (186)
T ss_dssp CEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHH
T ss_pred CccCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHH
Confidence 3 1 55789999998886431111245555444
No 212
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=98.91 E-value=7.6e-09 Score=75.82 Aligned_cols=83 Identities=14% Similarity=0.235 Sum_probs=62.2
Q ss_pred CCCcEEEEEeCCCCh-hhhhhhHHHHHHHHHhc---CCeEEEEEEcCC--C-------------------------h---
Q 030114 96 LSQPILIDWMASWCR-KCIYLKPKLEKLAAEFD---TKLKFYYVDVNK--V-------------------------S--- 141 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~-~C~~~~p~l~~la~~~~---~~v~~~~vd~d~--~-------------------------~--- 141 (183)
.+++++|+||++||+ +|....|.|.+++++++ .++.++.|.+|. . +
T Consensus 27 ~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~ 106 (170)
T 3me7_A 27 KGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDL 106 (170)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEESSHHHH
T ss_pred CCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHH
Confidence 589999999999997 69999999999999985 458888888761 0 0
Q ss_pred HHHHHhcCe---------E-------EeeCCeEEEEEecCc-chhhHHHHHHHHHHhh
Q 030114 142 KDLVKRGNI---------S-------IWKDGEMKSEVIGGH-KAWLVIEEVREMIKKF 182 (183)
Q Consensus 142 ~~~~~~~~i---------~-------~~~~Gk~v~~~~G~~-~~~~~~~~l~~~i~~~ 182 (183)
..+++.|++ . |.++|+++..+.|.. +. ++|.+.|++.
T Consensus 107 ~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~~~~~----~~i~~~l~~~ 160 (170)
T 3me7_A 107 FKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGVNYNY----LEFVNALRLA 160 (170)
T ss_dssp HHHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEEEESSSCCH----HHHHHHHHHH
T ss_pred HHHHHHCCeEEecCCCccccCceEEEECCCCeEEEEEeCCCCCH----HHHHHHHHHh
Confidence 135555442 1 778999999888873 34 6666666553
No 213
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.88 E-value=4.7e-09 Score=76.94 Aligned_cols=41 Identities=10% Similarity=0.259 Sum_probs=35.7
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEc
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDV 137 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~ 137 (183)
.++++|+.||.+|||+|+.+.|.++++.+++ +++.+...++
T Consensus 21 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~-~~v~~~~~~~ 61 (175)
T 3gyk_A 21 EGDVTVVEFFDYNCPYCRRAMAEVQGLVDAD-PNVRLVYREW 61 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHC-TTEEEEEEEC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHhC-CCEEEEEEeC
Confidence 5788999999999999999999999999988 5577776664
No 214
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=98.85 E-value=1.1e-08 Score=74.22 Aligned_cols=85 Identities=7% Similarity=-0.035 Sum_probs=61.2
Q ss_pred CCCcEEEEEeC-CCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChH----------------------HHHHhcCe--
Q 030114 96 LSQPILIDWMA-SWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSK----------------------DLVKRGNI-- 150 (183)
Q Consensus 96 ~~k~vlv~F~a-~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~----------------------~~~~~~~i-- 150 (183)
.+++++|+||+ +||++|....|.|.++++++ .++.++.|+.|.... .+++.|++
T Consensus 41 ~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~~v~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~ 119 (163)
T 1psq_A 41 DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-DNTVVLTVSMDLPFAQKRWCGAEGLDNAIMLSDYFDHSFGRDYALLI 119 (163)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHHHHHHHHHHHTCTTSEEEECTTTCHHHHHHTCBC
T ss_pred CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-CCcEEEEEECCCHHHHHHHHHhcCCCCcEEecCCchhHHHHHhCCcc
Confidence 57899999995 99999999999999999999 789999998874211 23444443
Q ss_pred --------E---EeeCCeEEEEEecCcch-hhHHHHHHHHHHh
Q 030114 151 --------S---IWKDGEMKSEVIGGHKA-WLVIEEVREMIKK 181 (183)
Q Consensus 151 --------~---~~~~Gk~v~~~~G~~~~-~~~~~~l~~~i~~ 181 (183)
. +.++|+++.++.|.... ....+++.+.|++
T Consensus 120 ~~~g~~~p~~~liD~~G~i~~~~~g~~~~~~~~~~~~l~~l~~ 162 (163)
T 1psq_A 120 NEWHLLARAVFVLDTDNTIRYVEYVDNINSEPNFEAAIAAAKA 162 (163)
T ss_dssp TTTCSBCCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHH
T ss_pred ccCCceEEEEEEEcCCCeEEEEEecCCcCCCCCHHHHHHHHHh
Confidence 1 55789999999875332 1223556665553
No 215
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=98.84 E-value=1.6e-08 Score=78.39 Aligned_cols=85 Identities=9% Similarity=0.117 Sum_probs=64.4
Q ss_pred CCCcEEEEEeC-CCChhhhhhhHHHHHHHHHhcC-CeEEEEEEcCCChH---------------------------HHHH
Q 030114 96 LSQPILIDWMA-SWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNKVSK---------------------------DLVK 146 (183)
Q Consensus 96 ~~k~vlv~F~a-~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~d~~~~---------------------------~~~~ 146 (183)
.++++||+||+ +||++|....|.|.+++++|++ ++.++.|++|.... .+++
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~ 155 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQISK 155 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHHH
Confidence 57899999999 9999999999999999999964 59999998874311 2555
Q ss_pred hcCeE-------------EeeCCeEEEEEecCcchhhHHHHHHHHHH
Q 030114 147 RGNIS-------------IWKDGEMKSEVIGGHKAWLVIEEVREMIK 180 (183)
Q Consensus 147 ~~~i~-------------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~ 180 (183)
.|++. |.++|+++.+..+..+.....+++.+.|+
T Consensus 156 ~ygv~~~~~g~~~p~~flID~~G~I~~~~~~~~~~~~~~~eil~~l~ 202 (240)
T 3qpm_A 156 DYGVYLEDQGHTLRGLFIIDEKGVLRQITMNDLPVGRSVDETLRLVQ 202 (240)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHH
T ss_pred HhCCccccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHH
Confidence 66652 66899999988876554444455555554
No 216
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.84 E-value=5.4e-09 Score=79.67 Aligned_cols=76 Identities=16% Similarity=0.272 Sum_probs=54.6
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCC------------------------------------
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNK------------------------------------ 139 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~------------------------------------ 139 (183)
+++++|+.||++|||+|+.+.|.++++.+. ++.+..+....
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~---~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~~ 161 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL---GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAPA 161 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT---TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCCCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC---CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCChh
Confidence 578899999999999999999999998753 46665554320
Q ss_pred ----C---hHHHHHhcCeE-----EeeCCeEEEEEecCcchhhHHHHHHHHHHh
Q 030114 140 ----V---SKDLVKRGNIS-----IWKDGEMKSEVIGGHKAWLVIEEVREMIKK 181 (183)
Q Consensus 140 ----~---~~~~~~~~~i~-----~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~ 181 (183)
. ...++++++|+ ++.||+ ++.|..+. ++|.++|++
T Consensus 162 ~~~~~v~~~~~l~~~~gV~gtPt~v~~dG~---~~~G~~~~----~~l~~~l~~ 208 (216)
T 1eej_A 162 SCDVDIADHYALGVQLGVSGTPAVVLSNGT---LVPGYQPP----KEMKEFLDE 208 (216)
T ss_dssp CCSCCHHHHHHHHHHHTCCSSSEEECTTSC---EEESCCCH----HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCccCEEEEcCCe---EecCCCCH----HHHHHHHHH
Confidence 0 11367788888 556885 56798887 566665554
No 217
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=98.83 E-value=3.3e-08 Score=72.46 Aligned_cols=43 Identities=19% Similarity=0.349 Sum_probs=36.5
Q ss_pred CCCcEEEEEeCCCCh-hhhhhhHHHHHHHHHhc---CCeEEEEEEcC
Q 030114 96 LSQPILIDWMASWCR-KCIYLKPKLEKLAAEFD---TKLKFYYVDVN 138 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~-~C~~~~p~l~~la~~~~---~~v~~~~vd~d 138 (183)
.+|++||+||++||+ +|....+.+.++.+.++ .++.++.|.+|
T Consensus 31 ~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvD 77 (170)
T 4hde_A 31 KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVD 77 (170)
T ss_dssp TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESC
T ss_pred CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecC
Confidence 689999999999996 79999999888877763 46888888876
No 218
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=98.82 E-value=1.1e-08 Score=76.26 Aligned_cols=85 Identities=14% Similarity=0.159 Sum_probs=59.2
Q ss_pred CCCc-EEEEEeCCCChhhhh-hhHHHHHHHHHhcC-CeE-EEEEEcCCCh----------------------HHHHHhcC
Q 030114 96 LSQP-ILIDWMASWCRKCIY-LKPKLEKLAAEFDT-KLK-FYYVDVNKVS----------------------KDLVKRGN 149 (183)
Q Consensus 96 ~~k~-vlv~F~a~wC~~C~~-~~p~l~~la~~~~~-~v~-~~~vd~d~~~----------------------~~~~~~~~ 149 (183)
.+++ +|+.||++||++|.. ..|.|.+++++|++ ++. ++.|+.|... ..+++.|+
T Consensus 55 ~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~f~~~~~~~~~fp~l~D~~~~va~~yG 134 (184)
T 3uma_A 55 KGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVNDLHVMGAWATHSGGMGKIHFLSDWNAAFTKAIG 134 (184)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHHTCTTTSEEEECTTCHHHHHTT
T ss_pred CCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHHhCCCCceEEEEcCchHHHHHcC
Confidence 4565 455567999999999 79999999999864 487 9999887421 12556666
Q ss_pred eE-----------------EeeCCeEEEEEecCcchhhHHHHHHHHHH
Q 030114 150 IS-----------------IWKDGEMKSEVIGGHKAWLVIEEVREMIK 180 (183)
Q Consensus 150 i~-----------------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~ 180 (183)
+. +..+|+++...+|..+.......+++.|+
T Consensus 135 v~~~~~~~g~g~~~~r~tfiIddG~I~~~~~~~~~g~~~~~~~~~vL~ 182 (184)
T 3uma_A 135 MEIDLSAGTLGIRSKRYSMLVEDGVVKALNIEESPGQATASGAAAMLE 182 (184)
T ss_dssp CEEEEGGGTCEEEECCEEEEEETTEEEEEEECSSTTCCSTTSHHHHHH
T ss_pred CceeccccCCcccceeEEEEECCCEEEEEEEeCCCCCCcCCCHHHHHh
Confidence 51 33699999999887543322344555554
No 219
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.82 E-value=4.3e-09 Score=67.43 Aligned_cols=67 Identities=12% Similarity=0.209 Sum_probs=49.2
Q ss_pred EEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHH---hcCeE----EeeCCeEEEEEecCcchhhHHH
Q 030114 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVK---RGNIS----IWKDGEMKSEVIGGHKAWLVIE 173 (183)
Q Consensus 101 lv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~---~~~i~----~~~~Gk~v~~~~G~~~~~~~~~ 173 (183)
++.|+++||++|+.+.+.|++. ++.+..+|++++++ +.+ ++++. ++.+|+. +.|. +. +
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~------~i~~~~vdi~~~~~-~~~~~~~~g~~~vP~~~~~g~~---~~g~-~~----~ 67 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR------GFDFEMINVDRVPE-AAEALRAQGFRQLPVVIAGDLS---WSGF-RP----D 67 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTCHH-HHHHHHHTTCCSSCEEEETTEE---EESC-CH----H
T ss_pred EEEEcCCCChhHHHHHHHHHHC------CCCeEEEECCCCHH-HHHHHHHhCCCccCEEEECCEE---EecC-CH----H
Confidence 5779999999999999998763 36788899998865 333 46776 7788864 3454 44 6
Q ss_pred HHHHHHHhh
Q 030114 174 EVREMIKKF 182 (183)
Q Consensus 174 ~l~~~i~~~ 182 (183)
+|+++|+++
T Consensus 68 ~l~~~l~~~ 76 (81)
T 1h75_A 68 MINRLHPAP 76 (81)
T ss_dssp HHGGGSCCC
T ss_pred HHHHHHhcc
Confidence 777776654
No 220
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=98.81 E-value=1.3e-08 Score=74.10 Aligned_cols=69 Identities=9% Similarity=0.067 Sum_probs=55.5
Q ss_pred CCCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCCh----------------------HHHHHhcCe--
Q 030114 96 LSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVS----------------------KDLVKRGNI-- 150 (183)
Q Consensus 96 ~~k~vlv~F~-a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~----------------------~~~~~~~~i-- 150 (183)
.++++||+|| ++||++|....|.|.++++++ .++.++.|+.|... ..+++.|++
T Consensus 42 ~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~ 120 (165)
T 1q98_A 42 ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-SNTIVLCISADLPFAQARFCGAEGIENAKTVSTFRNHALHSQLGVDI 120 (165)
T ss_dssp TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-TTEEEEEEESSCHHHHTTCTTTTTCTTEEEEECTTCTHHHHHTTCEE
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHcCCCceEEeeccccchHHHHhCcee
Confidence 5789999999 899999999999999999999 78999999876211 135666665
Q ss_pred ----------E----EeeCCeEEEEEecC
Q 030114 151 ----------S----IWKDGEMKSEVIGG 165 (183)
Q Consensus 151 ----------~----~~~~Gk~v~~~~G~ 165 (183)
. +.++|+++..+.|.
T Consensus 121 ~~~~~~g~~~p~~~liD~~G~i~~~~~~~ 149 (165)
T 1q98_A 121 QTGPLAGLTSRAVIVLDEQNNVLHSQLVE 149 (165)
T ss_dssp CSSTTTTSBCCEEEEECTTSBEEEEEECS
T ss_pred cccccCCccceeEEEEcCCCEEEEEEeCC
Confidence 2 56789999988863
No 221
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=98.80 E-value=1.9e-08 Score=73.41 Aligned_cols=43 Identities=12% Similarity=0.034 Sum_probs=39.3
Q ss_pred CCCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCC
Q 030114 96 LSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNK 139 (183)
Q Consensus 96 ~~k~vlv~F~-a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~ 139 (183)
.+++++|+|| ++||++|....|.|.++++++ .++.++.|+.|.
T Consensus 46 ~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~~v~vv~Is~d~ 89 (171)
T 2yzh_A 46 KDVVQVIITVPSLDTPVCETETKKFNEIMAGM-EGVDVTVVSMDL 89 (171)
T ss_dssp CSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSC
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHc-CCceEEEEeCCC
Confidence 5789999999 899999999999999999999 789999998874
No 222
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=98.78 E-value=3e-09 Score=71.61 Aligned_cols=58 Identities=16% Similarity=0.212 Sum_probs=42.8
Q ss_pred EEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCCh------HHHHHhcCeE----EeeCCeEEE
Q 030114 100 ILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVS------KDLVKRGNIS----IWKDGEMKS 160 (183)
Q Consensus 100 vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~------~~~~~~~~i~----~~~~Gk~v~ 160 (183)
.++.|+++|||+|+.+.+.|+++...+ ++ +..+|++..+ +.+.+.+++. ++.+|+.+.
T Consensus 13 ~v~~f~~~~C~~C~~~~~~L~~~~~~~-~~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i~~~g~~i~ 80 (105)
T 1kte_A 13 KVVVFIKPTCPFCRKTQELLSQLPFKE-GL--LEFVDITATSDTNEIQDYLQQLTGARTVPRVFIGKECIG 80 (105)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHSCBCT-TS--EEEEEGGGSTTHHHHHHHHHHHHSCCCSCEEEETTEEEE
T ss_pred CEEEEEcCCCHhHHHHHHHHHHcCCCC-Cc--cEEEEccCCCCHHHHHHHHHHHhCCCCcCeEEECCEEEe
Confidence 366699999999999999999876555 33 5556777652 2367778876 888997643
No 223
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.76 E-value=5.5e-09 Score=73.57 Aligned_cols=66 Identities=14% Similarity=0.351 Sum_probs=46.8
Q ss_pred chhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCC---hH---HHHHhcCeE----E
Q 030114 83 SDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKV---SK---DLVKRGNIS----I 152 (183)
Q Consensus 83 ~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~---~~---~~~~~~~i~----~ 152 (183)
.+.+.+++ ..+ .++| |+++||++|+.+.+.|+++. +.|..+|++.. ++ .+.+.+++. +
T Consensus 17 ~~~~~~~i----~~~-~vvv-f~~~~Cp~C~~~~~~L~~~~------i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l 84 (130)
T 2cq9_A 17 VNQIQETI----SDN-CVVI-FSKTSCSYCTMAKKLFHDMN------VNYKVVELDLLEYGNQFQDALYKMTGERTVPRI 84 (130)
T ss_dssp HHHHHHHH----HHS-SEEE-EECSSCSHHHHHHHHHHHHT------CCCEEEETTTSTTHHHHHHHHHHHHSSCCSSEE
T ss_pred HHHHHHHH----cCC-cEEE-EEcCCChHHHHHHHHHHHcC------CCcEEEECcCCcCcHHHHHHHHHHhCCCCcCEE
Confidence 45566666 333 4555 99999999999999998763 34566777765 32 367778877 8
Q ss_pred eeCCeEEE
Q 030114 153 WKDGEMKS 160 (183)
Q Consensus 153 ~~~Gk~v~ 160 (183)
+.+|+.+.
T Consensus 85 ~i~G~~ig 92 (130)
T 2cq9_A 85 FVNGTFIG 92 (130)
T ss_dssp EETTEEEE
T ss_pred EECCEEEc
Confidence 88998654
No 224
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=98.75 E-value=2e-08 Score=78.37 Aligned_cols=86 Identities=12% Similarity=0.184 Sum_probs=63.5
Q ss_pred CCCc-EEEEEeCCCChhhhhhhHHHHHHHHHhcC-CeEEEEEEcCCCh--------------------------HHHHHh
Q 030114 96 LSQP-ILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNKVS--------------------------KDLVKR 147 (183)
Q Consensus 96 ~~k~-vlv~F~a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~d~~~--------------------------~~~~~~ 147 (183)
.+++ ||+.||++||++|....|.|.+++++|+. ++.++.|++|... ..+++.
T Consensus 32 ~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia~~ 111 (249)
T 3a2v_A 32 QGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARR 111 (249)
T ss_dssp TTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTSHHHHH
T ss_pred CCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCchHHHHH
Confidence 5675 56688999999999999999999999864 6999999997521 136667
Q ss_pred cCe--------E------EeeCCeEEEEEecCcchhhHHHHHHHHHHh
Q 030114 148 GNI--------S------IWKDGEMKSEVIGGHKAWLVIEEVREMIKK 181 (183)
Q Consensus 148 ~~i--------~------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~ 181 (183)
|++ . |+++|+++....|..+.+...++|...|+.
T Consensus 112 ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~a 159 (249)
T 3a2v_A 112 LGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKA 159 (249)
T ss_dssp HTCCCTTCSSSCCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred hCCccccCCCcccceEEEECCCCeEEEEEecCCcccchhHHHHHHHHH
Confidence 765 2 668999999988875422223566665543
No 225
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.74 E-value=3.7e-08 Score=61.81 Aligned_cols=65 Identities=18% Similarity=0.277 Sum_probs=48.3
Q ss_pred EEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHH---hcCeE----EeeCCeEEEEEecCcchhhHHH
Q 030114 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVK---RGNIS----IWKDGEMKSEVIGGHKAWLVIE 173 (183)
Q Consensus 101 lv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~---~~~i~----~~~~Gk~v~~~~G~~~~~~~~~ 173 (183)
++.|+++||++|+.+.+.|+++ ++.+..+|++.+++ +.+ ++++. ++.+|+. +.|. +. +
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~------~i~~~~~di~~~~~-~~~~~~~~~~~~vP~l~~~g~~---~~g~-~~----~ 67 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA------GLAYNTVDISLDDE-ARDYVMALGYVQAPVVEVDGEH---WSGF-RP----E 67 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTCHH-HHHHHHHTTCBCCCEEEETTEE---EESC-CH----H
T ss_pred EEEEeCCCChHHHHHHHHHHHc------CCCcEEEECCCCHH-HHHHHHHcCCCccCEEEECCeE---EcCC-CH----H
Confidence 5679999999999999998765 36788899998865 343 67766 6668864 4465 44 6
Q ss_pred HHHHHHH
Q 030114 174 EVREMIK 180 (183)
Q Consensus 174 ~l~~~i~ 180 (183)
+|+++|+
T Consensus 68 ~l~~~l~ 74 (75)
T 1r7h_A 68 RIKQLQA 74 (75)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 7777764
No 226
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=98.74 E-value=2.8e-08 Score=77.77 Aligned_cols=85 Identities=9% Similarity=0.106 Sum_probs=64.1
Q ss_pred CCCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcC-CeEEEEEEcCCCh---------------------------HHHHH
Q 030114 96 LSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNKVS---------------------------KDLVK 146 (183)
Q Consensus 96 ~~k~vlv~F~-a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~d~~~---------------------------~~~~~ 146 (183)
.++++||+|| +.||++|....|.|.+++++|++ ++.++.|++|... ..+++
T Consensus 90 kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~ 169 (254)
T 3tjj_A 90 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 169 (254)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceeeCcHHHHHH
Confidence 5789999999 99999999999999999999964 5999999887431 12555
Q ss_pred hcCeE-------------EeeCCeEEEEEecCcchhhHHHHHHHHHH
Q 030114 147 RGNIS-------------IWKDGEMKSEVIGGHKAWLVIEEVREMIK 180 (183)
Q Consensus 147 ~~~i~-------------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~ 180 (183)
.|++. |.++|+++....+..+.....+++.+.|+
T Consensus 170 ~ygv~~~~~g~~~p~tflID~~G~I~~~~~~~~~~~~~~~eil~~L~ 216 (254)
T 3tjj_A 170 DYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQ 216 (254)
T ss_dssp HHTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHH
T ss_pred HcCCccccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHH
Confidence 56651 66889999988875554444455555554
No 227
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=98.73 E-value=3.9e-08 Score=71.45 Aligned_cols=84 Identities=10% Similarity=0.007 Sum_probs=59.7
Q ss_pred CCCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChH----------------------HHHHhcCeE-
Q 030114 96 LSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSK----------------------DLVKRGNIS- 151 (183)
Q Consensus 96 ~~k~vlv~F~-a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~----------------------~~~~~~~i~- 151 (183)
.+++++|+|| +.||++|....|.|.+++++ .++.++.|+.|.... .+++.|++.
T Consensus 45 ~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~--~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~ 122 (166)
T 3p7x_A 45 AGKKKLISVVPSIDTGVCDQQTRKFNSDASK--EEGIVLTISADLPFAQKRWCASAGLDNVITLSDHRDLSFGENYGVVM 122 (166)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHSCT--TTSEEEEEESSCHHHHHHHHHHHTCSSCEEEECTTTCHHHHHHTCEE
T ss_pred CCCcEEEEEECCCCCCccHHHHHHHHHHhhc--CCCEEEEEECCCHHHHHHHHHHcCCCceEEccCCchhHHHHHhCCcc
Confidence 5789999999 78999999999999999877 668888888764211 234444432
Q ss_pred ------------EeeCCeEEEEEecCcc-hhhHHHHHHHHHHh
Q 030114 152 ------------IWKDGEMKSEVIGGHK-AWLVIEEVREMIKK 181 (183)
Q Consensus 152 ------------~~~~Gk~v~~~~G~~~-~~~~~~~l~~~i~~ 181 (183)
+.++|+++.++.+... .....+++.+.|++
T Consensus 123 ~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 123 EELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKN 165 (166)
T ss_dssp TTTTEECCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHT
T ss_pred ccCCceeeEEEEECCCCeEEEEEEcCCcccCCCHHHHHHHHhc
Confidence 5688999888665532 22334666666654
No 228
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=98.71 E-value=4.4e-09 Score=79.32 Aligned_cols=45 Identities=16% Similarity=0.428 Sum_probs=41.5
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHH---HHHHHHhcCCeEEEEEEcCCC
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKL---EKLAAEFDTKLKFYYVDVNKV 140 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l---~~la~~~~~~v~~~~vd~d~~ 140 (183)
.++++||+||+.|||+|+.+.|.+ +++++++.+++.|.+++++.+
T Consensus 112 ~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~v~~~~~~v~~~ 159 (197)
T 1un2_A 112 AGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFM 159 (197)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTTCCEEEEECSSS
T ss_pred CCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCCCEEEEeccCcC
Confidence 467999999999999999999999 999999977899999999875
No 229
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=98.69 E-value=1.1e-07 Score=73.37 Aligned_cols=72 Identities=15% Similarity=0.286 Sum_probs=56.6
Q ss_pred CCCcEEEEEe-CCCChhhh-hhhHHHHHHHHHhcC-Ce-EEEEEEcCCCh---------------------HHHHHhcCe
Q 030114 96 LSQPILIDWM-ASWCRKCI-YLKPKLEKLAAEFDT-KL-KFYYVDVNKVS---------------------KDLVKRGNI 150 (183)
Q Consensus 96 ~~k~vlv~F~-a~wC~~C~-~~~p~l~~la~~~~~-~v-~~~~vd~d~~~---------------------~~~~~~~~i 150 (183)
.+++++|+|| ++||++|. ...|.|.++++++++ ++ .++.|+.|... ..+++.|++
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv 111 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFVMNAWKEDEKSENISFIPDGNGEFTEGMGM 111 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTSEEEECTTSHHHHHTTC
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHHHHHHHHHhcCCCceEEEECCCcHHHHHhCc
Confidence 5789999999 99999999 999999999999854 68 89999987421 125566654
Q ss_pred ---------------E--EeeCCeEEEEEecCcc
Q 030114 151 ---------------S--IWKDGEMKSEVIGGHK 167 (183)
Q Consensus 151 ---------------~--~~~~Gk~v~~~~G~~~ 167 (183)
. ++++|+++..+.|...
T Consensus 112 ~~~~~~~g~~~~~~p~t~li~~G~i~~~~~~~~~ 145 (241)
T 1nm3_A 112 LVGKEDLGFGKRSWRYSMLVKNGVVEKMFIEPNE 145 (241)
T ss_dssp EEECTTTTCCEEECCEEEEEETTEEEEEEECCSC
T ss_pred eeecccccCcccceeEEEEEECCEEEEEEEeccC
Confidence 1 2389999999888654
No 230
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=98.68 E-value=1.1e-08 Score=73.63 Aligned_cols=66 Identities=14% Similarity=0.345 Sum_probs=47.0
Q ss_pred CchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCC---hH---HHHHhcCeE----
Q 030114 82 DSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKV---SK---DLVKRGNIS---- 151 (183)
Q Consensus 82 ~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~---~~---~~~~~~~i~---- 151 (183)
..+.+.+++ ..+ +++| |+++|||+|+.+.+.|+++. +.+..+|++.. ++ .+.+.+++.
T Consensus 38 ~~~~~~~~i----~~~-~Vvv-f~~~~Cp~C~~~k~~L~~~~------i~~~~vdId~~~~~~~~~~~L~~~~g~~tvP~ 105 (146)
T 2ht9_A 38 PVNQIQETI----SDN-CVVI-FSKTSCSYCTMAKKLFHDMN------VNYKVVELDLLEYGNQFQDALYKMTGERTVPR 105 (146)
T ss_dssp CHHHHHHHH----HHC-SEEE-EECTTCHHHHHHHHHHHHHT------CCCEEEEGGGCTTHHHHHHHHHHHHSCCCSCE
T ss_pred HHHHHHHHh----cCC-CEEE-EECCCChhHHHHHHHHHHcC------CCeEEEECccCcCCHHHHHHHHHHhCCCCcCe
Confidence 456677777 333 5555 99999999999999998763 34556777655 32 367778877
Q ss_pred EeeCCeEE
Q 030114 152 IWKDGEMK 159 (183)
Q Consensus 152 ~~~~Gk~v 159 (183)
++.+|+.+
T Consensus 106 ifi~G~~i 113 (146)
T 2ht9_A 106 IFVNGTFI 113 (146)
T ss_dssp EEETTEEE
T ss_pred EEECCEEE
Confidence 88899764
No 231
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.68 E-value=2.6e-08 Score=75.67 Aligned_cols=77 Identities=14% Similarity=0.237 Sum_probs=55.6
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCC------------------------------------
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNK------------------------------------ 139 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~------------------------------------ 139 (183)
+++++|+.|+++|||+|+.+.|.++++.+. ++.+..+...-
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~---~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~~~ 161 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL---GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKEV 161 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT---TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCSSC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC---CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCChH
Confidence 467899999999999999999999997652 35555443321
Q ss_pred -C------hHHHHHhcCeE-----EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 140 -V------SKDLVKRGNIS-----IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 140 -~------~~~~~~~~~i~-----~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
. ...++++++|+ ++.||+ ++.|..+. ++|.++|++.
T Consensus 162 ~~~~~v~~~~~l~~~~gV~gTPt~vi~nG~---~~~G~~~~----~~l~~~l~~~ 209 (211)
T 1t3b_A 162 KTPNIVKKHYELGIQFGVRGTPSIVTSTGE---LIGGYLKP----ADLLRALEET 209 (211)
T ss_dssp CCSSHHHHHHHHHHHHTCCSSCEEECTTSC---CCCSCCCH----HHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHcCCCcCCEEEEeCCE---EecCCCCH----HHHHHHHHhc
Confidence 0 11366788888 445897 56788787 7888888753
No 232
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=98.66 E-value=1.2e-07 Score=71.44 Aligned_cols=69 Identities=9% Similarity=0.068 Sum_probs=55.2
Q ss_pred CCCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCCh----------------------HHHHHhcCe--
Q 030114 96 LSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVS----------------------KDLVKRGNI-- 150 (183)
Q Consensus 96 ~~k~vlv~F~-a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~----------------------~~~~~~~~i-- 150 (183)
.+++++|+|| +.||++|....|.|.+++++| .++.++.|+.|... ..+++.|++
T Consensus 77 ~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-~~v~vv~Is~D~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~ygv~~ 155 (200)
T 3zrd_A 77 AGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL-ENTVVLCISSDLPFAQSRFCGAEGLSNVITLSTLRGADFKQAYGVAI 155 (200)
T ss_dssp TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS-TTEEEEEEESSCHHHHTTCTTTTTCTTEEEEETTSCTHHHHHTTCEE
T ss_pred CCCcEEEEEECCCCCchhHHHHHHHHHHHHHh-CCCEEEEEECCCHHHHHHHHHHcCCCCceEEecCchHHHHHHhCcee
Confidence 6789999999 789999999999999999999 78999999887321 124555554
Q ss_pred ----------E----EeeCCeEEEEEecC
Q 030114 151 ----------S----IWKDGEMKSEVIGG 165 (183)
Q Consensus 151 ----------~----~~~~Gk~v~~~~G~ 165 (183)
. +.++|+++.+..+.
T Consensus 156 ~~~~~~g~~~p~~~lID~~G~I~~~~~~~ 184 (200)
T 3zrd_A 156 TEGPLAGLTARAVVVLDGQDNVIYSELVN 184 (200)
T ss_dssp CSSTTTTSBCCEEEEECTTSBEEEEEECS
T ss_pred ecccCCCccccEEEEECCCCeEEEEEecC
Confidence 1 56889999888765
No 233
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=98.65 E-value=4.9e-09 Score=72.01 Aligned_cols=60 Identities=12% Similarity=0.090 Sum_probs=44.4
Q ss_pred CcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCCh------HHHHHhcCeE----EeeCCeEEE
Q 030114 98 QPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVS------KDLVKRGNIS----IWKDGEMKS 160 (183)
Q Consensus 98 k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~------~~~~~~~~i~----~~~~Gk~v~ 160 (183)
...++.|+++|||+|+.+.+.|+++...+ ++ |..+|++..+ +.+.+.+++. ++.+|+.+.
T Consensus 18 ~~~vv~f~~~~Cp~C~~~~~~L~~~~~~~-~~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~i~g~~ig 87 (114)
T 2hze_A 18 NNKVTIFVKYTCPFCRNALDILNKFSFKR-GA--YEIVDIKEFKPENELRDYFEQITGGKTVPRIFFGKTSIG 87 (114)
T ss_dssp TTCEEEEECTTCHHHHHHHHHHTTSCBCT-TS--EEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEEETTEEEE
T ss_pred cCCEEEEEeCCChhHHHHHHHHHHcCCCc-Cc--eEEEEccCCCChHHHHHHHHHHhCCCCcCEEEECCEEEe
Confidence 34577799999999999999987654332 22 7788888774 2477888876 778997643
No 234
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=98.63 E-value=1.9e-07 Score=71.61 Aligned_cols=41 Identities=22% Similarity=0.343 Sum_probs=35.5
Q ss_pred cEEEEEeCCCChhhhhhhHHHHHHHHHhcC-CeEEEEEEcCC
Q 030114 99 PILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNK 139 (183)
Q Consensus 99 ~vlv~F~a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~d~ 139 (183)
.+|+.||++||++|....|.|.+++++|+. ++.++.|++|.
T Consensus 34 vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~ 75 (224)
T 1prx_A 34 GILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDS 75 (224)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSC
T ss_pred EEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 456667999999999999999999999864 69999998874
No 235
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=98.63 E-value=3.4e-08 Score=72.54 Aligned_cols=43 Identities=12% Similarity=0.271 Sum_probs=36.5
Q ss_pred CCcEEEEEeCCCChhhhhh-hHHHHHHHHHhcC-CeE-EEEEEcCC
Q 030114 97 SQPILIDWMASWCRKCIYL-KPKLEKLAAEFDT-KLK-FYYVDVNK 139 (183)
Q Consensus 97 ~k~vlv~F~a~wC~~C~~~-~p~l~~la~~~~~-~v~-~~~vd~d~ 139 (183)
++.+|+.||++||++|... .|.|.+++++++. ++. ++.|+.+.
T Consensus 44 k~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is~d~ 89 (171)
T 2pwj_A 44 KKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVAIND 89 (171)
T ss_dssp SEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEESSC
T ss_pred CCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCC
Confidence 3567788999999999999 9999999998853 588 99998864
No 236
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=98.63 E-value=6.6e-08 Score=71.32 Aligned_cols=85 Identities=13% Similarity=0.130 Sum_probs=56.8
Q ss_pred CCCcEEEEE-eCCCChhhh-hhhHHHHHHHHHhcC-CeEEEE-EEcCCCh----------------------HHHHHhcC
Q 030114 96 LSQPILIDW-MASWCRKCI-YLKPKLEKLAAEFDT-KLKFYY-VDVNKVS----------------------KDLVKRGN 149 (183)
Q Consensus 96 ~~k~vlv~F-~a~wC~~C~-~~~p~l~~la~~~~~-~v~~~~-vd~d~~~----------------------~~~~~~~~ 149 (183)
.+++++|.| |++||++|. ...|.|.+++++|+. ++.++. +..|... ..+++.|+
T Consensus 42 ~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D~~~~~~~f~~~~~~~~~fp~l~D~~~~va~~yG 121 (173)
T 3mng_A 42 KGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETD 121 (173)
T ss_dssp TTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHTTCTTTCEEEECTTCHHHHHHT
T ss_pred CCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCCCHHHHHHHHHHhCCCCceEEEECCChHHHHHhC
Confidence 567665555 599999999 589999999999864 477775 7776421 12555554
Q ss_pred e----------------E----EeeCCeEEEEEecCcchhhHHHHHHHHHHh
Q 030114 150 I----------------S----IWKDGEMKSEVIGGHKAWLVIEEVREMIKK 181 (183)
Q Consensus 150 i----------------~----~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~ 181 (183)
+ + |. +|++....++....+...++....|++
T Consensus 122 v~~~~~~~~~~g~~~~~r~tfvID-dG~I~~~~v~~~~~g~~~~~~~~vl~~ 172 (173)
T 3mng_A 122 LLLDDSLVSIFGNRRLKRFSMVVQ-DGIVKALNVEPDGTGLTCSLAPNIISQ 172 (173)
T ss_dssp CBCCSTTHHHHSSCCBCCEEEEEE-TTEEEEEEECTTSSCSSTTSHHHHHHH
T ss_pred CCcccccccccCCcceEEEEEEEE-CCEEEEEEEeCCCCCcchHHHHHHHHh
Confidence 3 1 44 899988888865433333555555543
No 237
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.60 E-value=2.6e-07 Score=68.59 Aligned_cols=43 Identities=9% Similarity=0.257 Sum_probs=38.6
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcC
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN 138 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d 138 (183)
.++++|+.||++|||+|+.+.|.+.++.+++.+++.|..+.+.
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~~ 66 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPADVHFVRLPAL 66 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEECC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCCCeEEEEEehh
Confidence 5788999999999999999999999999999778888877763
No 238
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.57 E-value=8.8e-07 Score=61.80 Aligned_cols=92 Identities=13% Similarity=0.166 Sum_probs=73.5
Q ss_pred cceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE---
Q 030114 75 VELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS--- 151 (183)
Q Consensus 75 ~~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~--- 151 (183)
.....|++.+++++.+ ..++++||-|+++||++| .+.|.++|+.+ +++.|+..+. ++ +++.+++.
T Consensus 21 ~~~~~i~s~~e~e~fi----~~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~d~~F~~t~~---~~-v~~~~~v~~~~ 88 (124)
T 2l4c_A 21 QEPTWLTDVPAAMEFI----AATEVAVIGFFQDLEIPA---VPILHSMVQKF-PGVSFGISTD---SE-VLTHYNITGNT 88 (124)
T ss_dssp CCCEECCSHHHHHHHH----HTSSEEEEEECSCTTSTH---HHHHHHHHHHC-TTSEEEEECC---HH-HHHHTTCCSSC
T ss_pred CcceEcCCHHHHHHHH----hcCCCEEEEEECCCCChh---HHHHHHHHHhC-CCceEEEECh---HH-HHHHcCCCCCe
Confidence 3466688899999999 578999999999999999 67899999999 8899987754 44 88888876
Q ss_pred --EeeCCe-EEEEEec----CcchhhHHHHHHHHHHhh
Q 030114 152 --IWKDGE-MKSEVIG----GHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 --~~~~Gk-~v~~~~G----~~~~~~~~~~l~~~i~~~ 182 (183)
+|+++. ....+.| ..+. +.|.+||..+
T Consensus 89 vvlfkkfde~~~~~~g~~~~~~~~----~~L~~FI~~n 122 (124)
T 2l4c_A 89 ICLFRLVDNEQLNLEDEDIESIDA----TKLSRFIEIN 122 (124)
T ss_dssp EEEEETTTTEEEEECHHHHTTCCH----HHHHHHHHHH
T ss_pred EEEEEcCCCCceeecCcccCCCCH----HHHHHHHHHh
Confidence 888764 4455665 4455 8999999764
No 239
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=98.52 E-value=8.4e-07 Score=68.43 Aligned_cols=44 Identities=7% Similarity=0.007 Sum_probs=38.3
Q ss_pred CCCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcC-CeEEEEEEcCC
Q 030114 96 LSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNK 139 (183)
Q Consensus 96 ~~k~vlv~F~-a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~d~ 139 (183)
+++++||.|| ++||++|....|.|.+++++++. ++.++.|++|.
T Consensus 28 Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~ 73 (233)
T 2v2g_A 28 GNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDN 73 (233)
T ss_dssp CSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSC
T ss_pred CCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCC
Confidence 4448999998 99999999999999999999854 69999998874
No 240
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=98.49 E-value=1.8e-07 Score=64.62 Aligned_cols=67 Identities=16% Similarity=0.327 Sum_probs=47.2
Q ss_pred hhHHHHHHHhhhCCCcEEEEEeCCCChhhhhh-hHHHHHHHHHhcCCeEEEEEEcCCCh------HHHHHhcCeE----E
Q 030114 84 DHLDQILLRAQELSQPILIDWMASWCRKCIYL-KPKLEKLAAEFDTKLKFYYVDVNKVS------KDLVKRGNIS----I 152 (183)
Q Consensus 84 ~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~-~p~l~~la~~~~~~v~~~~vd~d~~~------~~~~~~~~i~----~ 152 (183)
+.+++++ ... . ++.|+++|||+|+.+ .+.|+++.. +++.|..+|++..+ +.+.+.+++. +
T Consensus 16 ~~~~~~i----~~~-~-Vvvf~~~~Cp~C~~alk~~L~~~~~---~~i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~v 86 (118)
T 3c1r_A 16 KHVKDLI----AEN-E-IFVASKTYCPYCHAALNTLFEKLKV---PRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNI 86 (118)
T ss_dssp HHHHHHH----HHS-S-EEEEECSSCHHHHHHHHHHHTTSCC---CGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE
T ss_pred HHHHHHH----ccC-c-EEEEEcCCCcCHHHHHHHHHHHcCC---CCCCeEEEECccCCChHHHHHHHHHHhCCCCcCEE
Confidence 4455555 233 3 555999999999999 887766531 33778888988764 2477778876 8
Q ss_pred eeCCeEE
Q 030114 153 WKDGEMK 159 (183)
Q Consensus 153 ~~~Gk~v 159 (183)
|.+|+.+
T Consensus 87 fi~g~~i 93 (118)
T 3c1r_A 87 YINGKHI 93 (118)
T ss_dssp EETTEEE
T ss_pred EECCEEE
Confidence 8999863
No 241
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.47 E-value=2.2e-07 Score=69.14 Aligned_cols=43 Identities=16% Similarity=0.328 Sum_probs=40.2
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcC
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN 138 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d 138 (183)
.++++|+.||++|||+|+.+.|.++++.+++.+++.|..++++
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQDVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCCCeEEEEEecc
Confidence 5789999999999999999999999999999778999999986
No 242
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=98.46 E-value=6.7e-07 Score=68.31 Aligned_cols=41 Identities=20% Similarity=0.257 Sum_probs=34.9
Q ss_pred cEEEEEeCCCChhhhhhhHHHHHHHHHhcC-CeEEEEEEcCC
Q 030114 99 PILIDWMASWCRKCIYLKPKLEKLAAEFDT-KLKFYYVDVNK 139 (183)
Q Consensus 99 ~vlv~F~a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~d~ 139 (183)
.+|+.||++||++|....|.|.+++++++. ++.++.|++|.
T Consensus 34 vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~ 75 (220)
T 1xcc_A 34 AILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNS 75 (220)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSC
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 445556899999999999999999999865 69999998874
No 243
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.46 E-value=4.4e-07 Score=70.19 Aligned_cols=40 Identities=13% Similarity=0.191 Sum_probs=33.5
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEc
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDV 137 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~ 137 (183)
+.+.+|+.|+.+|||+|+.+.|.+.++.+. +++.+..+.+
T Consensus 96 ~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g~v~v~~~~~ 135 (241)
T 1v58_A 96 DAPVIVYVFADPFCPYCKQFWQQARPWVDS--GKVQLRTLLV 135 (241)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHT--TSEEEEEEEC
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHhC--CcEEEEEEEC
Confidence 456689999999999999999999988775 5687777665
No 244
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=98.45 E-value=3.1e-07 Score=66.51 Aligned_cols=44 Identities=14% Similarity=0.277 Sum_probs=38.8
Q ss_pred CCCcEEEEEe-CCCChhhh-hhhHHHHHHHHHhc-CCeE-EEEEEcCC
Q 030114 96 LSQPILIDWM-ASWCRKCI-YLKPKLEKLAAEFD-TKLK-FYYVDVNK 139 (183)
Q Consensus 96 ~~k~vlv~F~-a~wC~~C~-~~~p~l~~la~~~~-~~v~-~~~vd~d~ 139 (183)
.+++++|+|| ++||++|. ...|.|.+++++++ .++. ++.|+.|.
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~ 81 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVND 81 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSC
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCC
Confidence 6789999999 89999999 89999999999985 4688 88888764
No 245
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=98.44 E-value=9.2e-07 Score=59.54 Aligned_cols=63 Identities=14% Similarity=0.311 Sum_probs=45.1
Q ss_pred hhHHHHHHHhhhCCCcEEEEEeC-----CCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChH---HHHHhcCeE----
Q 030114 84 DHLDQILLRAQELSQPILIDWMA-----SWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSK---DLVKRGNIS---- 151 (183)
Q Consensus 84 ~~~~~~l~~a~~~~k~vlv~F~a-----~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~---~~~~~~~i~---- 151 (183)
+.+++++ + ..+|+| |++ +|||+|+.+.+.|+++. +.|..+|++.+++ .+.+.+++.
T Consensus 8 ~~~~~~i----~-~~~vvv-f~~g~~~~~~C~~C~~~~~~L~~~~------i~~~~vdi~~~~~~~~~l~~~~g~~~vP~ 75 (105)
T 2yan_A 8 ERLKVLT----N-KASVML-FMKGNKQEAKCGFSKQILEILNSTG------VEYETFDILEDEEVRQGLKAYSNWPTYPQ 75 (105)
T ss_dssp HHHHHHH----T-SSSEEE-EESBCSSSBCTTHHHHHHHHHHHHT------CCCEEEEGGGCHHHHHHHHHHHTCCSSCE
T ss_pred HHHHHHh----c-cCCEEE-EEecCCCCCCCccHHHHHHHHHHCC------CCeEEEECCCCHHHHHHHHHHHCCCCCCe
Confidence 3455555 3 345666 776 99999999999997762 6688899998865 244455655
Q ss_pred EeeCCeE
Q 030114 152 IWKDGEM 158 (183)
Q Consensus 152 ~~~~Gk~ 158 (183)
+|.||+.
T Consensus 76 v~i~g~~ 82 (105)
T 2yan_A 76 LYVKGEL 82 (105)
T ss_dssp EEETTEE
T ss_pred EEECCEE
Confidence 8889975
No 246
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=98.44 E-value=3e-07 Score=67.26 Aligned_cols=44 Identities=11% Similarity=0.031 Sum_probs=38.2
Q ss_pred CCCcEEEEEe-CCCChhhhh-hhHHHHHHHHHhcC-Ce-EEEEEEcCC
Q 030114 96 LSQPILIDWM-ASWCRKCIY-LKPKLEKLAAEFDT-KL-KFYYVDVNK 139 (183)
Q Consensus 96 ~~k~vlv~F~-a~wC~~C~~-~~p~l~~la~~~~~-~v-~~~~vd~d~ 139 (183)
.+++++|.|| ++||++|.. ..|.|.++++++++ ++ .++.|+.|.
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~ 77 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVND 77 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSC
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCC
Confidence 5788888886 999999999 99999999998853 68 999998864
No 247
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.36 E-value=2.9e-06 Score=62.83 Aligned_cols=99 Identities=11% Similarity=0.093 Sum_probs=74.5
Q ss_pred hhHHHHHHHh----hhCCCcEEEEEeCCCChhhhhhhHHH---HHHHHHhcCCeEEEEEEcCCChH--------------
Q 030114 84 DHLDQILLRA----QELSQPILIDWMASWCRKCIYLKPKL---EKLAAEFDTKLKFYYVDVNKVSK-------------- 142 (183)
Q Consensus 84 ~~~~~~l~~a----~~~~k~vlv~F~a~wC~~C~~~~p~l---~~la~~~~~~v~~~~vd~d~~~~-------------- 142 (183)
..|++++..| +...|+++|+++++||..|..+...+ +++.+-++.++.+...|++....
T Consensus 38 gs~~~Al~~A~~~~k~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~nfV~w~~dv~~~e~~~~~~~~~~~~~g~ 117 (178)
T 2ec4_A 38 GSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQNFITWAWDLTKDSNRARFLTMCNRHFGS 117 (178)
T ss_dssp SCHHHHHHTTTSSCTTTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHHTEEEEEEECCSHHHHHHHHHHHHHHTCH
T ss_pred CCHHHHHHHHHhhhhhhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHcCEEEEEEeCCCchhhhhhhhhhhhhhHH
Confidence 4588899888 78999999999999999999988543 44544454579999999997651
Q ss_pred HHHHh---cCeE-------EeeC---CeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 143 DLVKR---GNIS-------IWKD---GEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 143 ~~~~~---~~i~-------~~~~---Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
.++.. +++. +... ++++.++.|..+.+.+.+.|.+.++++
T Consensus 118 ~~a~~~~~~~~~~~P~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~~e~~ 170 (178)
T 2ec4_A 118 VVAQTIRTQKTDQFPLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAAMEIF 170 (178)
T ss_dssp HHHHHHHHSCSTTCSEEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcCCCCCCeEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHHHHHh
Confidence 13333 6666 3333 367899999999988888887777654
No 248
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=98.36 E-value=1.7e-06 Score=57.84 Aligned_cols=57 Identities=14% Similarity=0.193 Sum_probs=41.4
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChH---HHHHhc-CeE----EeeCCeE
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSK---DLVKRG-NIS----IWKDGEM 158 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~---~~~~~~-~i~----~~~~Gk~ 158 (183)
+.+.-++.|+++|||+|+.+.+.|+++. +.|..+|++..++ .+.+.. +.. +|.+|+.
T Consensus 13 ~~~~~v~vy~~~~Cp~C~~ak~~L~~~~------i~y~~idI~~~~~~~~~l~~~~~g~~~vP~ifi~g~~ 77 (99)
T 3qmx_A 13 AVSAKIEIYTWSTCPFCMRALALLKRKG------VEFQEYCIDGDNEAREAMAARANGKRSLPQIFIDDQH 77 (99)
T ss_dssp CCCCCEEEEECTTCHHHHHHHHHHHHHT------CCCEEEECTTCHHHHHHHHHHTTTCCCSCEEEETTEE
T ss_pred cCCCCEEEEEcCCChhHHHHHHHHHHCC------CCCEEEEcCCCHHHHHHHHHHhCCCCCCCEEEECCEE
Confidence 3444566699999999999999998762 5677789988865 133333 545 8899975
No 249
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=98.33 E-value=7.3e-07 Score=66.57 Aligned_cols=45 Identities=20% Similarity=0.380 Sum_probs=40.9
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCC
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKV 140 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~ 140 (183)
.++++|+.|+++|||+|+.+.|.+.++.+++.+++.|..++++-.
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~~v~~~~~p~~~~ 67 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDDMYLRTEHVVWQ 67 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCTTEEEEEEECCCS
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCCCeEEEEecCCCC
Confidence 468899999999999999999999999999977899999998744
No 250
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=98.33 E-value=1.2e-06 Score=59.66 Aligned_cols=65 Identities=12% Similarity=0.374 Sum_probs=42.1
Q ss_pred chhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCC----hH---HHHHhcCeE----
Q 030114 83 SDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKV----SK---DLVKRGNIS---- 151 (183)
Q Consensus 83 ~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~----~~---~~~~~~~i~---- 151 (183)
.+.+.+.+ +.++ ++.|+++|||+|+.+.+.|+++. +.+-.+|++.. ++ .+.+..++.
T Consensus 9 ~~~~~~~i----~~~~--v~vy~~~~Cp~C~~~~~~L~~~~------i~~~~~di~~~~~~~~~~~~~l~~~~g~~tvP~ 76 (113)
T 3rhb_A 9 EESIRKTV----TENT--VVIYSKTWCSYCTEVKTLFKRLG------VQPLVVELDQLGPQGPQLQKVLERLTGQHTVPN 76 (113)
T ss_dssp HHHHHHHH----HHSS--EEEEECTTCHHHHHHHHHHHHTT------CCCEEEEGGGSTTHHHHHHHHHHHHHSCCSSCE
T ss_pred HHHHHHHH----hcCC--EEEEECCCChhHHHHHHHHHHcC------CCCeEEEeecCCCChHHHHHHHHHHhCCCCcCE
Confidence 34455555 3333 55699999999999999987652 34556677653 21 244445655
Q ss_pred EeeCCeEE
Q 030114 152 IWKDGEMK 159 (183)
Q Consensus 152 ~~~~Gk~v 159 (183)
+|.+|+.+
T Consensus 77 ifi~g~~i 84 (113)
T 3rhb_A 77 VFVCGKHI 84 (113)
T ss_dssp EEETTEEE
T ss_pred EEECCEEE
Confidence 88999753
No 251
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=98.29 E-value=5e-06 Score=63.35 Aligned_cols=111 Identities=8% Similarity=0.132 Sum_probs=76.4
Q ss_pred eeeccccCCCCCCCc--cceEecCCchhHHHHHHHhhhCCCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcC-CeEEEEE
Q 030114 60 VRVEALWPDLSRPTS--VELEPINDSDHLDQILLRAQELSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFDT-KLKFYYV 135 (183)
Q Consensus 60 ~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~-a~wC~~C~~~~p~l~~la~~~~~-~v~~~~v 135 (183)
+.++...|++.+++. ....+++-. + -.++++|+.|| +.||+.|....+.|.+.+++++. ++.++.|
T Consensus 23 ~~VG~~APdF~l~a~~d~~~~~vsLs-d---------~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigi 92 (216)
T 3sbc_A 23 AQVQKQAPTFKKTAVVDGVFDEVSLD-K---------YKGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFA 92 (216)
T ss_dssp CCTTSBCCCCCEEEEETTEEEEECGG-G---------GTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEE
T ss_pred hhcCCcCCCCCCcceECCCCcEEehH-H---------hCCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEe
Confidence 456777888887642 233444322 2 26789999999 99999999999999999999854 6999999
Q ss_pred EcCCCh---------------------------HHHHHhcCeE-------------EeeCCeEEEEEecCcchhhHHHHH
Q 030114 136 DVNKVS---------------------------KDLVKRGNIS-------------IWKDGEMKSEVIGGHKAWLVIEEV 175 (183)
Q Consensus 136 d~d~~~---------------------------~~~~~~~~i~-------------~~~~Gk~v~~~~G~~~~~~~~~~l 175 (183)
++|... ..+++.|++- |+++|++....+...+.+.-.+++
T Consensus 93 S~Ds~~sh~aw~~~~~~~~~~~~l~fpllsD~~~~vak~YGv~~~~~g~~~R~tFiID~~G~Ir~~~v~~~~~grn~dEi 172 (216)
T 3sbc_A 93 STDSEYSLLAWTNIPRKEGGLGPINIPLLADTNHSLSRDYGVLIEEEGVALRGLFIIDPKGVIRHITINDLPVGRNVDEA 172 (216)
T ss_dssp ESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHHHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHH
T ss_pred ecCchhhHHHHHHHHHHhCCccCcccceEeCCCCHHHHHcCCeeccCCceeeEEEEECCCCeEEEEEEcCCCCCCCHHHH
Confidence 987421 1367777764 778898877665444333333555
Q ss_pred HHHHH
Q 030114 176 REMIK 180 (183)
Q Consensus 176 ~~~i~ 180 (183)
...|+
T Consensus 173 Lr~l~ 177 (216)
T 3sbc_A 173 LRLVE 177 (216)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55443
No 252
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.28 E-value=7.5e-06 Score=62.44 Aligned_cols=96 Identities=15% Similarity=0.131 Sum_probs=69.8
Q ss_pred eEecCCchhHHHHHHHhhhCCCc-EEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCC--ChHHHHHhcCeE--
Q 030114 77 LEPINDSDHLDQILLRAQELSQP-ILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNK--VSKDLVKRGNIS-- 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~-vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~--~~~~~~~~~~i~-- 151 (183)
+.++ +.+++.... ..+.+ +++.|..+||+.|..+.+.|+++|+++++++.|+.+|.+. ... +++.||+.
T Consensus 115 v~e~-t~~n~~~~~----~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~i~F~~vd~~~~~~~~-~l~~fgl~~~ 188 (227)
T 4f9z_D 115 VTEY-NPVTVIGLF----NSVIQIHLLLIMNKASPEYEENMHRYQKAAKLFQGKILFILVDSGMKENGK-VISFFKLKES 188 (227)
T ss_dssp EEEC-CHHHHHHHH----HSSCCEEEEEEECTTSTTHHHHHHHHHHHHHHTTTTCEEEEEETTSGGGHH-HHHHTTCCGG
T ss_pred eeec-CcccHHHHh----ccCCceEEEEEEcCCcchHHHHHHHHHHHHHHhhCCEEEEEeCCccHhHHH-HHHHcCCCcc
Confidence 4455 467788877 45544 5566778999999999999999999999999999999974 444 78999987
Q ss_pred ------EeeC-CeEEEEEe-cCcchhhHHHHHHHHHHhh
Q 030114 152 ------IWKD-GEMKSEVI-GGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 ------~~~~-Gk~v~~~~-G~~~~~~~~~~l~~~i~~~ 182 (183)
++.. +.....+. |..+. +.|.+|++++
T Consensus 189 ~~P~~~i~~~~~~~ky~~~~~~~t~----~~i~~Fv~~~ 223 (227)
T 4f9z_D 189 QLPALAIYQTLDDEWDTLPTAEVSV----EHVQNFCDGF 223 (227)
T ss_dssp GCSEEEEEESSSCCEEEETTCCCCH----HHHHHHHHHH
T ss_pred cCCEEEEEECCCCccccCCcCCCCH----HHHHHHHHHH
Confidence 3332 22223332 44455 8899998875
No 253
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=98.25 E-value=4.1e-06 Score=53.16 Aligned_cols=65 Identities=15% Similarity=0.263 Sum_probs=45.0
Q ss_pred EEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChH---HHHHhcCeE----EeeCCeEEEEEecCcchhhHHH
Q 030114 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSK---DLVKRGNIS----IWKDGEMKSEVIGGHKAWLVIE 173 (183)
Q Consensus 101 lv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~---~~~~~~~i~----~~~~Gk~v~~~~G~~~~~~~~~ 173 (183)
++.|+++||++|+.+.+.+++. ++.+..+|++..++ .+.+.+++. ++.+|+.+ .|. +
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~------~i~~~~~~i~~~~~~~~~~~~~~~~~~vP~l~~~g~~i---~g~-------~ 66 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK------GVSFQELPIDGNAAKREEMIKRSGRTTVPQIFIDAQHI---GGY-------D 66 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH------TCCCEEEECTTCSHHHHHHHHHHSSCCSCEEEETTEEE---ESH-------H
T ss_pred EEEEECCCChhHHHHHHHHHHC------CCCcEEEECCCCHHHHHHHHHHhCCCCcCEEEECCEEE---eCH-------H
Confidence 5669999999999999988764 25577788887643 245566665 77888753 344 4
Q ss_pred HHHHHHHh
Q 030114 174 EVREMIKK 181 (183)
Q Consensus 174 ~l~~~i~~ 181 (183)
.|.+++++
T Consensus 67 ~i~~~~~~ 74 (82)
T 1fov_A 67 DLYALDAR 74 (82)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHC
Confidence 56665543
No 254
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.24 E-value=7.2e-06 Score=60.71 Aligned_cols=43 Identities=16% Similarity=0.318 Sum_probs=38.2
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcC
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN 138 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d 138 (183)
.++++|+.||.+|||+|..+.|.+.++.+++++++.|..+.+.
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~~ 63 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEHVV 63 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCTTEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCCceEEEEeccc
Confidence 5788999999999999999999999999999777888877763
No 255
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=98.24 E-value=1.4e-06 Score=56.61 Aligned_cols=52 Identities=19% Similarity=0.318 Sum_probs=38.8
Q ss_pred EEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcC--CChHHHHHhc-CeE----EeeCCeE
Q 030114 100 ILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN--KVSKDLVKRG-NIS----IWKDGEM 158 (183)
Q Consensus 100 vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d--~~~~~~~~~~-~i~----~~~~Gk~ 158 (183)
-++.|+++||++|+.+.+.|++.. +.+..+|++ ..+ .+.+.+ ++. ++.+|+.
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~~------i~~~~vdv~~~~~~-~l~~~~~~~~~vP~l~~~g~~ 65 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKKG------VKYTDIDASTSLRQ-EMVQRANGRNTFPQIFIGDYH 65 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHHT------CCEEEECSCHHHHH-HHHHHHHSSCCSCEEEETTEE
T ss_pred eEEEEECCCChhHHHHHHHHHHcC------CCcEEEECCHHHHH-HHHHHhCCCCCcCEEEECCEE
Confidence 366799999999999999888752 557778887 223 367777 665 7788875
No 256
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=98.17 E-value=2.6e-06 Score=55.57 Aligned_cols=66 Identities=18% Similarity=0.300 Sum_probs=44.5
Q ss_pred EEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCC-----Ch---HHHHHhcCeE----EeeCCeEEEEEecCcch
Q 030114 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNK-----VS---KDLVKRGNIS----IWKDGEMKSEVIGGHKA 168 (183)
Q Consensus 101 lv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~-----~~---~~~~~~~~i~----~~~~Gk~v~~~~G~~~~ 168 (183)
++.|+++||++|+.+.+.|+++. +.+-.+|++. .+ ..+.+.+++. ++.+|+. +.|+ +.
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~g------i~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~~g~~---i~G~-~~ 83 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKREG------VDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVKGDKH---VLGY-NE 83 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHHT------CCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEETTEE---EESC-CH
T ss_pred EEEEECCCChHHHHHHHHHHHcC------CCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEECCEE---EeCC-CH
Confidence 56699999999999998888763 3344566663 21 2355666655 6668853 4455 55
Q ss_pred hhHHHHHHHHHH
Q 030114 169 WLVIEEVREMIK 180 (183)
Q Consensus 169 ~~~~~~l~~~i~ 180 (183)
++|.++|+
T Consensus 84 ----~~l~~~l~ 91 (92)
T 3ic4_A 84 ----EKLKELIR 91 (92)
T ss_dssp ----HHHHHHHH
T ss_pred ----HHHHHHhc
Confidence 78888875
No 257
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=98.16 E-value=9e-07 Score=65.86 Aligned_cols=44 Identities=9% Similarity=0.372 Sum_probs=38.6
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHH---HHHHHHhcCCeEEEEEEcCC
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKL---EKLAAEFDTKLKFYYVDVNK 139 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l---~~la~~~~~~v~~~~vd~d~ 139 (183)
..+++||.|++.|||+|+.+.|.+ .++.+.+.+++.|+.+++.-
T Consensus 13 ~~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 59 (189)
T 3l9v_A 13 VDAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQGSRMVKYHVSL 59 (189)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCTTCCEEEEECSS
T ss_pred CCCCEEEEEECCCChhHHHHhHhccchHHHHHhCCCCCEEEEEechh
Confidence 357899999999999999999987 68888887789999999876
No 258
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=98.14 E-value=6.2e-06 Score=53.72 Aligned_cols=53 Identities=17% Similarity=0.275 Sum_probs=39.5
Q ss_pred EEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChH---HHHHhcCeE----EeeCCeE
Q 030114 100 ILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSK---DLVKRGNIS----IWKDGEM 158 (183)
Q Consensus 100 vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~---~~~~~~~i~----~~~~Gk~ 158 (183)
-++.|+++||++|+.+.+.|++. ++.|..+|++..+. .+.+.+++. ++.+|+.
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~~~------~i~~~~~di~~~~~~~~~l~~~~~~~~vP~l~~~g~~ 66 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLARK------GAEFNEIDASATPELRAEMQERSGRNTFPQIFIGSVH 66 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT------TCCCEEEESTTSHHHHHHHHHHHTSSCCCEEEETTEE
T ss_pred cEEEEECCCChhHHHHHHHHHHc------CCCcEEEECCCCHHHHHHHHHHhCCCCcCEEEECCEE
Confidence 36679999999999999888764 36678889987754 244456655 7788864
No 259
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=98.12 E-value=9.9e-06 Score=54.17 Aligned_cols=70 Identities=27% Similarity=0.370 Sum_probs=43.6
Q ss_pred CcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCC-h---HHHH----HhcCeE----EeeCCeEEEEEecC
Q 030114 98 QPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKV-S---KDLV----KRGNIS----IWKDGEMKSEVIGG 165 (183)
Q Consensus 98 k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~-~---~~~~----~~~~i~----~~~~Gk~v~~~~G~ 165 (183)
+.-++.|+++|||+|+.+.+.|+++. +.+-.+|++.. + ..+. +..++. ++.+|. +++|.
T Consensus 21 ~~~v~ly~~~~Cp~C~~ak~~L~~~~------i~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i~~~---~~igg 91 (103)
T 3nzn_A 21 RGKVIMYGLSTCVWCKKTKKLLTDLG------VDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTIINDE---KAIVG 91 (103)
T ss_dssp CSCEEEEECSSCHHHHHHHHHHHHHT------BCEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEETTT---EEEES
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcC------CCcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEECCC---EEEEc
Confidence 34466699999999999999998763 33455666642 1 1122 233444 666662 24555
Q ss_pred cchhhHHHHHHHHHH
Q 030114 166 HKAWLVIEEVREMIK 180 (183)
Q Consensus 166 ~~~~~~~~~l~~~i~ 180 (183)
.+. ++|.++|+
T Consensus 92 ~~~----~~l~~~L~ 102 (103)
T 3nzn_A 92 FKE----KEIRESLG 102 (103)
T ss_dssp CCH----HHHHHHTT
T ss_pred CCH----HHHHHHhC
Confidence 565 77877763
No 260
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=98.09 E-value=1.1e-05 Score=53.28 Aligned_cols=68 Identities=24% Similarity=0.449 Sum_probs=45.3
Q ss_pred EEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHH---HHHhc-CeE-----EeeCCeEEEEEecCcchhhH
Q 030114 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKD---LVKRG-NIS-----IWKDGEMKSEVIGGHKAWLV 171 (183)
Q Consensus 101 lv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~---~~~~~-~i~-----~~~~Gk~v~~~~G~~~~~~~ 171 (183)
|+.|+++|||.|+.....|++ .++.|-.+|++++++. +.+.. |.+ ++.||+. +.|. +.
T Consensus 6 I~vYs~~~Cp~C~~aK~~L~~------~gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~I~i~Dg~~---l~~~-~~--- 72 (92)
T 2lqo_A 6 LTIYTTSWCGYCLRLKTALTA------NRIAYDEVDIEHNRAAAEFVGSVNGGNRTVPTVKFADGST---LTNP-SA--- 72 (92)
T ss_dssp EEEEECTTCSSHHHHHHHHHH------TTCCCEEEETTTCHHHHHHHHHHSSSSSCSCEEEETTSCE---EESC-CH---
T ss_pred EEEEcCCCCHhHHHHHHHHHh------cCCceEEEEcCCCHHHHHHHHHHcCCCCEeCEEEEeCCEE---EeCC-CH---
Confidence 666999999999999887765 3477889999998762 22221 333 4567865 3454 33
Q ss_pred HHHHHHHHHhh
Q 030114 172 IEEVREMIKKF 182 (183)
Q Consensus 172 ~~~l~~~i~~~ 182 (183)
++|++.|++.
T Consensus 73 -~el~~~L~el 82 (92)
T 2lqo_A 73 -DEVKAKLVKI 82 (92)
T ss_dssp -HHHHHHHHHH
T ss_pred -HHHHHHHHHh
Confidence 5676666543
No 261
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=98.09 E-value=4.6e-06 Score=53.72 Aligned_cols=69 Identities=19% Similarity=0.182 Sum_probs=45.3
Q ss_pred cEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCCh---HHHHHhcCe-----E----EeeCCeEEEEEecCc
Q 030114 99 PILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVS---KDLVKRGNI-----S----IWKDGEMKSEVIGGH 166 (183)
Q Consensus 99 ~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~---~~~~~~~~i-----~----~~~~Gk~v~~~~G~~ 166 (183)
..++.|+++|||+|+.+.+.|+++. -.+.+..+|.+..+ +.+.+.++. . ++.+|+.+ .|.
T Consensus 4 m~v~ly~~~~Cp~C~~~~~~L~~~~----i~~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~i~g~~i---~g~- 75 (89)
T 3msz_A 4 MKVKIYTRNGCPYCVWAKQWFEENN----IAFDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFIDDEHI---GGF- 75 (89)
T ss_dssp CCEEEEECTTCHHHHHHHHHHHHTT----CCCEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEEETTEEE---ESH-
T ss_pred eEEEEEEcCCChhHHHHHHHHHHcC----CCceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEEECCEEE---eCh-
Confidence 4477799999999999988886542 34556666665542 236666776 4 77899753 354
Q ss_pred chhhHHHHHHHHHHh
Q 030114 167 KAWLVIEEVREMIKK 181 (183)
Q Consensus 167 ~~~~~~~~l~~~i~~ 181 (183)
+++.+++++
T Consensus 76 ------~~i~~~~~~ 84 (89)
T 3msz_A 76 ------TELKANADK 84 (89)
T ss_dssp ------HHHHHTHHH
T ss_pred ------HHHHHHHHH
Confidence 455555544
No 262
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=98.04 E-value=9.9e-06 Score=55.31 Aligned_cols=64 Identities=19% Similarity=0.325 Sum_probs=42.0
Q ss_pred chhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCC--hH----HHHHhcCeE----E
Q 030114 83 SDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKV--SK----DLVKRGNIS----I 152 (183)
Q Consensus 83 ~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~--~~----~~~~~~~i~----~ 152 (183)
.+.+++.+ +. .+++| |+++|||+|+.+.+.|+++ ++.+-.+|++.. .. .+.+..+.. +
T Consensus 7 ~~~~~~~i----~~-~~v~v-y~~~~Cp~C~~ak~~L~~~------~i~~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~v 74 (114)
T 3h8q_A 7 RRHLVGLI----ER-SRVVI-FSKSYCPHSTRVKELFSSL------GVECNVLELDQVDDGARVQEVLSEITNQKTVPNI 74 (114)
T ss_dssp HHHHHHHH----HH-CSEEE-EECTTCHHHHHHHHHHHHT------TCCCEEEETTTSTTHHHHHHHHHHHHSCCSSCEE
T ss_pred HHHHHHHh----cc-CCEEE-EEcCCCCcHHHHHHHHHHc------CCCcEEEEecCCCChHHHHHHHHHHhCCCccCEE
Confidence 44566666 33 34444 9999999999999888765 244666777753 21 244444544 8
Q ss_pred eeCCeE
Q 030114 153 WKDGEM 158 (183)
Q Consensus 153 ~~~Gk~ 158 (183)
|.+|+.
T Consensus 75 fi~g~~ 80 (114)
T 3h8q_A 75 FVNKVH 80 (114)
T ss_dssp EETTEE
T ss_pred EECCEE
Confidence 889975
No 263
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.03 E-value=2.8e-05 Score=52.54 Aligned_cols=64 Identities=14% Similarity=0.274 Sum_probs=45.2
Q ss_pred chhHHHHHHHhhhCCCcEEEEEeC-----CCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChH---HHHHhcCeE---
Q 030114 83 SDHLDQILLRAQELSQPILIDWMA-----SWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSK---DLVKRGNIS--- 151 (183)
Q Consensus 83 ~~~~~~~l~~a~~~~k~vlv~F~a-----~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~---~~~~~~~i~--- 151 (183)
.+.+++++ . ...|+| |+. +||++|+.+.+.|+++ ++.|..+|++.+++ .+.+..+..
T Consensus 5 ~~~~~~~i----~-~~~vvv-y~~g~~~~~~Cp~C~~ak~~L~~~------~i~~~~vdi~~~~~~~~~l~~~~g~~~vP 72 (109)
T 1wik_A 5 SSGLKVLT----N-KASVML-FMKGNKQEAKCGFSKQILEILNST------GVEYETFDILEDEEVRQGLKTFSNWPTYP 72 (109)
T ss_dssp CCCHHHHH----T-TSSEEE-EESSTTTCCCSSTHHHHHHHHHHT------CSCEEEEESSSCHHHHHHHHHHHSCCSSC
T ss_pred HHHHHHHh----c-cCCEEE-EEecCCCCCCCchHHHHHHHHHHc------CCCeEEEECCCCHHHHHHHHHHhCCCCCC
Confidence 34577777 3 344555 666 9999999999888764 46788999998864 244444544
Q ss_pred -EeeCCeE
Q 030114 152 -IWKDGEM 158 (183)
Q Consensus 152 -~~~~Gk~ 158 (183)
+|.+|+.
T Consensus 73 ~ifi~g~~ 80 (109)
T 1wik_A 73 QLYVRGDL 80 (109)
T ss_dssp EEECSSSE
T ss_pred EEEECCEE
Confidence 8899985
No 264
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=97.99 E-value=3.3e-06 Score=59.14 Aligned_cols=69 Identities=13% Similarity=0.294 Sum_probs=45.4
Q ss_pred CchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhh-hHHHHHHHHHhcCCeEEEEEEcCCCh------HHHHHhcCeE---
Q 030114 82 DSDHLDQILLRAQELSQPILIDWMASWCRKCIYL-KPKLEKLAAEFDTKLKFYYVDVNKVS------KDLVKRGNIS--- 151 (183)
Q Consensus 82 ~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~-~p~l~~la~~~~~~v~~~~vd~d~~~------~~~~~~~~i~--- 151 (183)
..+.+++.+ ...+ |+.|+++|||+|+.+ .+.|+++..+ .+.+..+|++..+ +.+.+.++..
T Consensus 26 ~~~~v~~~i----~~~~--Vvvy~~~~Cp~C~~a~k~~L~~~~~~---~i~~~~vdvd~~~~~~~~~~~L~~~~g~~tVP 96 (129)
T 3ctg_A 26 TVAHVKDLI----GQKE--VFVAAKTYCPYCKATLSTLFQELNVP---KSKALVLELDEMSNGSEIQDALEEISGQKTVP 96 (129)
T ss_dssp HHHHHHHHH----HHSS--EEEEECTTCHHHHHHHHHHHTTSCCC---GGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSC
T ss_pred HHHHHHHHH----cCCC--EEEEECCCCCchHHHHHHHHHhcCcc---CCCcEEEEccccCCHHHHHHHHHHHhCCCCCC
Confidence 345566666 3333 566999999999999 8877665321 2445566666542 2477777765
Q ss_pred -EeeCCeEE
Q 030114 152 -IWKDGEMK 159 (183)
Q Consensus 152 -~~~~Gk~v 159 (183)
+|.+|+.+
T Consensus 97 ~vfi~g~~i 105 (129)
T 3ctg_A 97 NVYINGKHI 105 (129)
T ss_dssp EEEETTEEE
T ss_pred EEEECCEEE
Confidence 88999753
No 265
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=97.96 E-value=5.2e-05 Score=57.80 Aligned_cols=111 Identities=10% Similarity=0.152 Sum_probs=73.5
Q ss_pred eeeccccCCCCCCC---ccceEecCCchhHHHHHHHhhhCCCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcC-CeEEEE
Q 030114 60 VRVEALWPDLSRPT---SVELEPINDSDHLDQILLRAQELSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFDT-KLKFYY 134 (183)
Q Consensus 60 ~~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~-a~wC~~C~~~~p~l~~la~~~~~-~v~~~~ 134 (183)
+.++...|++.+++ .....+++-. + -.++++|+.|| +.||+.|......|.+.+.+++. ++.++.
T Consensus 26 ~~vG~~APdF~~~a~l~d~~g~~vsLs-d---------~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vig 95 (219)
T 3tue_A 26 AKINSPAPSFEEVALMPNGSFKKISLS-S---------YKGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLA 95 (219)
T ss_dssp CCTTSBCCCCEEEEECTTSCEEEEEGG-G---------GTTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEE
T ss_pred cccCCcCCCCcccccccCCCCcEEehH-H---------hCCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEE
Confidence 45677778876321 1233444322 2 26789999999 99999999999999999999865 699999
Q ss_pred EEcCCCh---------------------------HHHHHhcCeE-------------EeeCCeEEEEEecCcchhhHHHH
Q 030114 135 VDVNKVS---------------------------KDLVKRGNIS-------------IWKDGEMKSEVIGGHKAWLVIEE 174 (183)
Q Consensus 135 vd~d~~~---------------------------~~~~~~~~i~-------------~~~~Gk~v~~~~G~~~~~~~~~~ 174 (183)
|.+|... ..+++.|++- |+++|++....+...+...-.++
T Consensus 96 iS~Ds~~sh~~w~~~~~~~~~~~~l~fpllsD~~~~va~~yGv~~~~~g~~~R~tFiIDp~g~Ir~~~~~~~~~gr~~~E 175 (219)
T 3tue_A 96 CSIDSEYAHLQWTLQDRKKGGLGTMAIPILADKTKNIARSYGVLEESQGVAYRGLFIIDPHGMLRQITVNDMPVGRSVEE 175 (219)
T ss_dssp EESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHH
T ss_pred eeCCchhhHHHHhhhhHHhcCccccccccccCcccHHHHHcCCcccCCCeeEEEEEEECCCCeEEEEEEecCCCCCCHHH
Confidence 9987421 1367777765 77889887765433332222244
Q ss_pred HHHHHH
Q 030114 175 VREMIK 180 (183)
Q Consensus 175 l~~~i~ 180 (183)
+...|+
T Consensus 176 vLr~l~ 181 (219)
T 3tue_A 176 VLRLLE 181 (219)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444443
No 266
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=97.96 E-value=3.1e-05 Score=59.26 Aligned_cols=39 Identities=18% Similarity=0.148 Sum_probs=32.8
Q ss_pred CCCcEEEEEeCCC-Chhhh-----hhhHHHHHHHHHhcCCeEEEEEEcC
Q 030114 96 LSQPILIDWMASW-CRKCI-----YLKPKLEKLAAEFDTKLKFYYVDVN 138 (183)
Q Consensus 96 ~~k~vlv~F~a~w-C~~C~-----~~~p~l~~la~~~~~~v~~~~vd~d 138 (183)
.++++||+||+.| |++|. ...|.|.++ + .++.++.|+.|
T Consensus 47 ~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~-~gv~VvgIS~D 91 (224)
T 3keb_A 47 SHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W-PHLKLIVITVD 91 (224)
T ss_dssp TTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C-TTSEEEEEESS
T ss_pred CCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c-CCCEEEEEECC
Confidence 5789999999998 99999 777777776 5 56888888876
No 267
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=97.91 E-value=7.8e-06 Score=60.60 Aligned_cols=42 Identities=12% Similarity=0.125 Sum_probs=37.4
Q ss_pred CCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCC
Q 030114 97 SQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKV 140 (183)
Q Consensus 97 ~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~ 140 (183)
++++||.|+..|||+|+.+.|.++++.+++ ++.|..+.+.-.
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~--~v~~~~~p~~~~ 63 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA--GTDIGKMHITFN 63 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH--TSCCEEEECCSS
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh--CCeEEEEeccCC
Confidence 689999999999999999999999999998 578888887643
No 268
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=97.89 E-value=5.9e-05 Score=57.40 Aligned_cols=92 Identities=14% Similarity=0.174 Sum_probs=71.5
Q ss_pred cceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE---
Q 030114 75 VELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS--- 151 (183)
Q Consensus 75 ~~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~--- 151 (183)
....++++.+++++.+ ..++.+||-|+++| |..+.+.|.++|+.+ +++.|+... +++ ++++++++
T Consensus 9 ~~~~~l~s~~~~~~~l----~~~~v~vVgff~~~---~~~~~~~f~~~A~~l-~~~~F~~t~---~~~-v~~~~~v~~p~ 76 (227)
T 4f9z_D 9 QEPTWLTDVPAAMEFI----AATEVAVIGFFQDL---EIPAVPILHSMVQKF-PGVSFGIST---DSE-VLTHYNITGNT 76 (227)
T ss_dssp CCCEECCSHHHHHHHH----HTSSEEEEEECSCS---CSTHHHHHHHHTTTC-TTSEEEEEC---CHH-HHHHTTCCSSE
T ss_pred CCCeeeCCHHHHHHHH----hcCCeEEEEEecCC---CchhHHHHHHHHHhC-CCceEEEEC---CHH-HHHHcCCCCCe
Confidence 4567899999999988 57899999999998 467889999999999 688888743 455 88999987
Q ss_pred --EeeCCe-EEEEEec----CcchhhHHHHHHHHHHhh
Q 030114 152 --IWKDGE-MKSEVIG----GHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 --~~~~Gk-~v~~~~G----~~~~~~~~~~l~~~i~~~ 182 (183)
+|+.+. ....+.| ..+. +.|.+||...
T Consensus 77 i~lfk~~~~~~~~~~~~~~g~~~~----~~l~~fi~~~ 110 (227)
T 4f9z_D 77 ICLFRLVDNEQLNLEDEDIESIDA----TKLSRFIEIN 110 (227)
T ss_dssp EEEEETTTTEEEEECHHHHHTCCH----HHHHHHHHHH
T ss_pred EEEEEecCcccccccccccCCCCH----HHHHHHHHHh
Confidence 777643 3345554 4555 8899998764
No 269
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=97.88 E-value=0.00011 Score=59.29 Aligned_cols=91 Identities=19% Similarity=0.209 Sum_probs=69.6
Q ss_pred eEecCCchhHHHHHHHhhh-CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE----
Q 030114 77 LEPINDSDHLDQILLRAQE-LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS---- 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~-~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~---- 151 (183)
+.++++.++++..+ . .++.++|.|+++||.+ ..+.|.++|..+.+++.|+.++ +++ +++++++.
T Consensus 125 ~~~l~~~~~~~~~~----~~~~~~~vv~ff~~~~~~---~~~~~~~~A~~~~~~~~f~~~~---~~~-~~~~~~v~~p~i 193 (350)
T 1sji_A 125 VEIINSKLEVQAFE----RIEDQIKLIGFFKSEESE---YYKAFEEAAEHFQPYIKFFATF---DKG-VAKKLSLKMNEV 193 (350)
T ss_dssp EEECCSHHHHHHHH----HCCSSCEEEEECSCTTSH---HHHHHHHHHHHTTTTSEEEEEC---CHH-HHHHHTCCTTCE
T ss_pred ceeccchHHHHHHh----ccCCCcEEEEEECCCCcH---HHHHHHHHHHhhccCcEEEEEC---CHH-HHHHcCCCCCcE
Confidence 56788888899988 5 5678999999998755 4588999999998889998873 344 89999886
Q ss_pred -EeeC-CeEEEEEecC-cchhhHHHHHHHHHHhh
Q 030114 152 -IWKD-GEMKSEVIGG-HKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 -~~~~-Gk~v~~~~G~-~~~~~~~~~l~~~i~~~ 182 (183)
+++. ++....+.|. .+. +.|.+||+++
T Consensus 194 ~~~~~~~~~~~~y~g~~~~~----~~l~~fi~~~ 223 (350)
T 1sji_A 194 DFYEPFMDEPIAIPDKPYTE----EELVEFVKEH 223 (350)
T ss_dssp EEECTTCSSCEECSSSSCCH----HHHHHHHHHH
T ss_pred EEEeCCCCCceecCCCCCCH----HHHHHHHHHc
Confidence 6665 3334456675 565 8899998764
No 270
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.80 E-value=7.5e-05 Score=53.38 Aligned_cols=37 Identities=19% Similarity=0.282 Sum_probs=29.9
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEc
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDV 137 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~ 137 (183)
+.+.+|+.|+.++||+|+.+.+.++++ +++.++..+.
T Consensus 13 ~a~~~vv~f~D~~Cp~C~~~~~~l~~l-----~~v~v~~~~~ 49 (147)
T 3gv1_A 13 NGKLKVAVFSDPDCPFCKRLEHEFEKM-----TDVTVYSFMM 49 (147)
T ss_dssp TCCEEEEEEECTTCHHHHHHHHHHTTC-----CSEEEEEEEC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHhhc-----CceEEEEEEc
Confidence 568899999999999999999988654 5666666553
No 271
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=97.77 E-value=0.00011 Score=53.50 Aligned_cols=42 Identities=21% Similarity=0.511 Sum_probs=36.7
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEc
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDV 137 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~ 137 (183)
.++++||.|+.-.||+|+.+.|.+.++.+++.+++.+..+..
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~~~~~~~~~ 61 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEGAKFQKNHV 61 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTTCEEEEEEC
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCceEEEEEec
Confidence 568899999999999999999999999999977777766654
No 272
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.72 E-value=7.6e-05 Score=54.18 Aligned_cols=43 Identities=16% Similarity=0.183 Sum_probs=37.6
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHh--cCCeEEEEEEcC
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEF--DTKLKFYYVDVN 138 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~--~~~v~~~~vd~d 138 (183)
..+.+|+.|+..|||+|+.+.|.+.++.++| .+++.++..++.
T Consensus 26 ~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 70 (175)
T 1z6m_A 26 NAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKLFD 70 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeCC
Confidence 4677899999999999999999999999888 678888887764
No 273
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=97.69 E-value=8e-05 Score=54.81 Aligned_cols=43 Identities=16% Similarity=0.308 Sum_probs=38.0
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcC
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN 138 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d 138 (183)
.++.+|+.|+.+|||+|..+.|.+.++.+++.+++.+..+.+.
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~~ 66 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAKDVRFTLVPAV 66 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTEEEEEEECC
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCCceEEEEeCcc
Confidence 4567899999999999999999999999999778888888774
No 274
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=97.67 E-value=0.00013 Score=59.59 Aligned_cols=91 Identities=16% Similarity=0.206 Sum_probs=69.7
Q ss_pred eEecCCchhHHHHHHHhhh-CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE----
Q 030114 77 LEPINDSDHLDQILLRAQE-LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS---- 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~-~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~---- 151 (183)
+..+++.++++..+ . ..+.++|.|+++||. ...+.|.++|..+.+++.|+.++ +.. ++++|+|+
T Consensus 127 v~~i~~~~~~~~~~----~~~~~~~vv~ff~~~~~---~~~~~f~~~A~~~~~~~~F~~~~---~~~-~~~~~~v~~p~i 195 (367)
T 3us3_A 127 VELIEGERELQAFE----NIEDEIKLIGYFKNKDS---EHYKAFKEAAEEFHPYIPFFATF---DSK-VAKKLTLKLNEI 195 (367)
T ss_dssp EEECCSHHHHHHHH----HCCSSCEEEEECSCTTC---HHHHHHHHHHHHHTTTSCEEEEC---CHH-HHHHHTCCTTCE
T ss_pred cEEcCCHHHHHHHh----ccCCCcEEEEEECCCCc---hHHHHHHHHHHhhcCCcEEEEEC---CHH-HHHHcCCCCCeE
Confidence 66788888999988 4 568899999999876 45678999999998889998864 344 89999987
Q ss_pred -EeeCC-eEEEEEecC-cchhhHHHHHHHHHHhh
Q 030114 152 -IWKDG-EMKSEVIGG-HKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 -~~~~G-k~v~~~~G~-~~~~~~~~~l~~~i~~~ 182 (183)
+|+.+ +....+.|. .+. +.|.+||..+
T Consensus 196 ~lf~~~~~~~~~y~g~~~~~----~~l~~fi~~~ 225 (367)
T 3us3_A 196 DFYEAFMEEPVTIPDKPNSE----EEIVNFVEEH 225 (367)
T ss_dssp EEECTTCSSCEECSSSSCCH----HHHHHHHHHT
T ss_pred EEEcCCCCCCeecCCCCCCH----HHHHHHHHHc
Confidence 67763 333456673 565 8899998764
No 275
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=97.67 E-value=0.00021 Score=57.53 Aligned_cols=70 Identities=11% Similarity=-0.038 Sum_probs=52.2
Q ss_pred CCCcEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCCh--------------------HHHHHhcCeE---
Q 030114 96 LSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVS--------------------KDLVKRGNIS--- 151 (183)
Q Consensus 96 ~~k~vlv~F~-a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~--------------------~~~~~~~~i~--- 151 (183)
.||+||++|| +.||+.|....+.|.+ ....++.++.|+.|... ..+++.||+.
T Consensus 23 ~Gk~vvl~F~p~~~tp~C~~e~~~~~~---~~~~~~~v~gis~D~~~~~~~f~~~~~l~fp~l~D~~~~v~~~ygv~~~~ 99 (322)
T 4eo3_A 23 YGKYTILFFFPKAGTSGSTREAVEFSR---ENFEKAQVVGISRDSVEALKRFKEKNDLKVTLLSDPEGILHEFFNVLENG 99 (322)
T ss_dssp TTSEEEEEECSSTTSHHHHHHHHHHHH---SCCTTEEEEEEESCCHHHHHHHHHHHTCCSEEEECTTCHHHHHTTCEETT
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHH---HhhCCCEEEEEeCCCHHHHHHHHHhhCCceEEEEcCchHHHHhcCCCCCC
Confidence 6899999999 6799999988777754 23356889999887421 1367777762
Q ss_pred --------EeeCCeEEEEEecCcch
Q 030114 152 --------IWKDGEMKSEVIGGHKA 168 (183)
Q Consensus 152 --------~~~~Gk~v~~~~G~~~~ 168 (183)
|+++|++.+.+.+....
T Consensus 100 ~~~r~tfiId~~G~i~~~~~~v~~~ 124 (322)
T 4eo3_A 100 KTVRSTFLIDRWGFVRKEWRRVKVE 124 (322)
T ss_dssp EECCEEEEECTTSBEEEEEESCCST
T ss_pred cCccEEEEECCCCEEEEEEeCCCcc
Confidence 77899998888877654
No 276
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=97.56 E-value=5.9e-05 Score=56.10 Aligned_cols=44 Identities=14% Similarity=0.398 Sum_probs=37.8
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHH---HHHHHHhcCCeEEEEEEcCC
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKL---EKLAAEFDTKLKFYYVDVNK 139 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l---~~la~~~~~~v~~~~vd~d~ 139 (183)
.++++||.|+..|||+|..+.|.+ .++.+.+.++++|..+++.-
T Consensus 20 ~~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~~v~~~~~~~~~ 66 (191)
T 3l9s_A 20 AGEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPEGTKMTKYHVEF 66 (191)
T ss_dssp CSSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCTTCCEEEEECSS
T ss_pred CCCCeEEEEECCCChhHHHhChhccchHHHHHhCCCCcEEEEEeccc
Confidence 358899999999999999999987 69999997678888887664
No 277
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=97.52 E-value=0.0002 Score=52.72 Aligned_cols=49 Identities=12% Similarity=0.289 Sum_probs=38.7
Q ss_pred HHHHHHHhhhCCC-cEEEEEeCCCChhhhh-hhHHHHHHHHHhcC-Ce-EEEEEEcCC
Q 030114 86 LDQILLRAQELSQ-PILIDWMASWCRKCIY-LKPKLEKLAAEFDT-KL-KFYYVDVNK 139 (183)
Q Consensus 86 ~~~~l~~a~~~~k-~vlv~F~a~wC~~C~~-~~p~l~~la~~~~~-~v-~~~~vd~d~ 139 (183)
+.+.+ .++ .||+.|++.|||+|.. ..|.|.+.+++++. ++ .++.|.+|.
T Consensus 41 Lsd~~-----~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~VigIS~D~ 93 (176)
T 4f82_A 41 VRDQV-----AGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIWCVSVND 93 (176)
T ss_dssp HHHHH-----TTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSC
T ss_pred HHHHh-----CCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 55655 455 4566778999999999 99999999999853 57 888888874
No 278
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=97.49 E-value=0.00071 Score=52.14 Aligned_cols=91 Identities=9% Similarity=0.208 Sum_probs=69.1
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE-----
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS----- 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~----- 151 (183)
+.++++.++++..+ ..++.++|-|+++|| ....+.|.++|..+.+++.|+.+. +.+ +++++++.
T Consensus 8 v~~l~s~~~~~~~l----~~~~v~vvgff~~~~---~~~~~~f~~~A~~lr~~~~F~~~~---~~~-v~~~~~~~~p~i~ 76 (252)
T 2h8l_A 8 SVPLRTEEEFKKFI----SDKDASIVGFFDDSF---SEAHSEFLKAASNLRDNYRFAHTN---VES-LVNEYDDNGEGII 76 (252)
T ss_dssp EEECCSHHHHHHHH----TSSSCEEEEEESCTT---SHHHHHHHHHHHHTTTTSCEEEEC---CHH-HHHHHCSSSEEEE
T ss_pred ceeecCHHHHHHHh----hcCCeEEEEEECCCC---ChHHHHHHHHHHhcccCcEEEEEC---hHH-HHHHhCCCCCcEE
Confidence 56788889999988 678889999999984 556778999999998889888773 344 88888876
Q ss_pred EeeCC-------eEEEEE-ecCcchhhHHHHHHHHHHhh
Q 030114 152 IWKDG-------EMKSEV-IGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 ~~~~G-------k~v~~~-~G~~~~~~~~~~l~~~i~~~ 182 (183)
+|+.+ +....+ .|..+. +.|.+||..+
T Consensus 77 ~fk~~~~~~kf~e~~~~y~~g~~~~----~~l~~fi~~~ 111 (252)
T 2h8l_A 77 LFRPSHLTNKFEDKTVAYTEQKMTS----GKIKKFIQEN 111 (252)
T ss_dssp EECCGGGCCTTSCSEEECCCSSCCH----HHHHHHHHHH
T ss_pred EEcchhhcccccccccccCCCCcCH----HHHHHHHHhc
Confidence 66642 222345 676666 8999999764
No 279
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=97.47 E-value=0.00021 Score=50.38 Aligned_cols=64 Identities=25% Similarity=0.445 Sum_probs=42.5
Q ss_pred hhHHHHHHHhhhCCCcEEEEEeC----CCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChH---HHHHhcCeE----E
Q 030114 84 DHLDQILLRAQELSQPILIDWMA----SWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSK---DLVKRGNIS----I 152 (183)
Q Consensus 84 ~~~~~~l~~a~~~~k~vlv~F~a----~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~---~~~~~~~i~----~ 152 (183)
+.+++.+ ....|+|+.++ +||+.|+.....|.++ ++.|..+|++.+++ .+.+..+.. +
T Consensus 26 ~~v~~~i-----~~~~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~------gv~y~~vdI~~d~~~~~~L~~~~G~~tvP~V 94 (135)
T 2wci_A 26 EKIQRQI-----AENPILLYMKGSPKLPSCGFSAQAVQALAAC------GERFAYVDILQNPDIRAELPKYANWPTFPQL 94 (135)
T ss_dssp HHHHHHH-----HHCSEEEEESBCSSSBSSHHHHHHHHHHHTT------CSCCEEEEGGGCHHHHHHHHHHHTCCSSCEE
T ss_pred HHHHHHh-----ccCCEEEEEEecCCCCCCccHHHHHHHHHHc------CCceEEEECCCCHHHHHHHHHHHCCCCcCEE
Confidence 4455555 23456665554 9999999998888654 36688889987764 233333433 8
Q ss_pred eeCCeE
Q 030114 153 WKDGEM 158 (183)
Q Consensus 153 ~~~Gk~ 158 (183)
|.||+.
T Consensus 95 fI~G~~ 100 (135)
T 2wci_A 95 WVDGEL 100 (135)
T ss_dssp EETTEE
T ss_pred EECCEE
Confidence 999975
No 280
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=97.37 E-value=0.00035 Score=48.67 Aligned_cols=69 Identities=17% Similarity=0.130 Sum_probs=40.7
Q ss_pred chhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChH----HHHHhcCeE----Eee
Q 030114 83 SDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSK----DLVKRGNIS----IWK 154 (183)
Q Consensus 83 ~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~----~~~~~~~i~----~~~ 154 (183)
.++|++++ +..+ |+.|+.+|||.|+.....|.+.. .++..+..+.+|.+.+.. .+.+..+.. +|-
T Consensus 4 ~~~~~~ii-----~~~~-Vvvysk~~Cp~C~~ak~lL~~~~-~~~v~~~~idid~~~d~~~~~~~l~~~~G~~tVP~IfI 76 (127)
T 3l4n_A 4 QKEYSLIL-----DLSP-IIIFSKSTCSYSKGMKELLENEY-QFIPNYYIIELDKHGHGEELQEYIKLVTGRGTVPNLLV 76 (127)
T ss_dssp HHHHHHHH-----TSCS-EEEEECTTCHHHHHHHHHHHHHE-EEESCCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEEE
T ss_pred HHHHHHHH-----ccCC-EEEEEcCCCccHHHHHHHHHHhc-ccCCCcEEEEecCCCCHHHHHHHHHHHcCCCCcceEEE
Confidence 35677777 3344 55599999999999998887741 112233444444433322 133333433 999
Q ss_pred CCeE
Q 030114 155 DGEM 158 (183)
Q Consensus 155 ~Gk~ 158 (183)
+|+.
T Consensus 77 ~G~~ 80 (127)
T 3l4n_A 77 NGVS 80 (127)
T ss_dssp TTEE
T ss_pred CCEE
Confidence 9974
No 281
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=97.36 E-value=0.00046 Score=46.79 Aligned_cols=56 Identities=18% Similarity=0.332 Sum_probs=38.3
Q ss_pred CCCcEEEEEeC-----CCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChH---HHHHhcCeE----EeeCCeE
Q 030114 96 LSQPILIDWMA-----SWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSK---DLVKRGNIS----IWKDGEM 158 (183)
Q Consensus 96 ~~k~vlv~F~a-----~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~---~~~~~~~i~----~~~~Gk~ 158 (183)
...+|+| |.. +|||.|+.....|++. ++.+-.+|++.+++ .+.+..+.. +|.+|+.
T Consensus 14 ~~~~Vvl-f~kg~~~~~~Cp~C~~ak~~L~~~------gi~y~~~di~~d~~~~~~l~~~~g~~tvP~ifi~g~~ 81 (111)
T 3zyw_A 14 HAAPCML-FMKGTPQEPRCGFSKQMVEILHKH------NIQFSSFDIFSDEEVRQGLKAYSSWPTYPQLYVSGEL 81 (111)
T ss_dssp TSSSEEE-EESBCSSSBSSHHHHHHHHHHHHT------TCCCEEEEGGGCHHHHHHHHHHHTCCSSCEEEETTEE
T ss_pred hcCCEEE-EEecCCCCCcchhHHHHHHHHHHc------CCCeEEEECcCCHHHHHHHHHHHCCCCCCEEEECCEE
Confidence 4556665 777 9999999999887653 35677788887765 122222333 8899964
No 282
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=97.16 E-value=0.0024 Score=49.16 Aligned_cols=91 Identities=10% Similarity=0.056 Sum_probs=67.8
Q ss_pred eEecCCchhHHHHHHHhhhC-CCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE----
Q 030114 77 LEPINDSDHLDQILLRAQEL-SQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS---- 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~-~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~---- 151 (183)
+.++++.+++++.+ .. ++.++|-|++++| ....+.|.++|+.+.+++.|+... +++ +++.++++
T Consensus 8 v~~l~s~~~~~~~~----~~~~~v~vVgff~~~~---~~~~~~F~~~A~~lr~~~~F~~t~---~~~-v~~~~~v~~p~i 76 (250)
T 3ec3_A 8 SKEILTLKQVQEFL----KDGDDVVILGVFQGVG---DPGYLQYQDAANTLREDYKFHHTF---STE-IAKFLKVSLGKL 76 (250)
T ss_dssp SEECCCHHHHHHHH----HHCSSCEEEEECSCTT---CHHHHHHHHHHHHHTTTCCEEEEC---CHH-HHHHHTCCSSEE
T ss_pred ceecCCHHHHHHHH----hcCCCeEEEEEEcCCC---chHHHHHHHHHHhhhcCcEEEEEC---cHH-HHHHcCCCCCeE
Confidence 56788889999988 46 8899999999975 567889999999998889998853 344 78888876
Q ss_pred -EeeCC-------eEEEEEec--CcchhhHHHHHHHHHHhh
Q 030114 152 -IWKDG-------EMKSEVIG--GHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 -~~~~G-------k~v~~~~G--~~~~~~~~~~l~~~i~~~ 182 (183)
+|+.+ +....+.| ..+. +.|.+||..+
T Consensus 77 vlfk~~~~~~kfde~~~~y~g~~~~~~----~~l~~fi~~~ 113 (250)
T 3ec3_A 77 VLMQPEKFQSKYEPRMHVMDVQGSTEA----SAIKDYVVKH 113 (250)
T ss_dssp EEECCGGGCCTTSCSCEEEECCTTSCH----HHHHHHHHHH
T ss_pred EEEecchhhccccccceeccCCCCCCH----HHHHHHHHHc
Confidence 66632 22234453 4555 8899998764
No 283
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=97.11 E-value=0.002 Score=43.33 Aligned_cols=56 Identities=20% Similarity=0.320 Sum_probs=37.3
Q ss_pred CCCcEEEEEeC-----CCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChH---HHHHhcCeE----EeeCCeE
Q 030114 96 LSQPILIDWMA-----SWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSK---DLVKRGNIS----IWKDGEM 158 (183)
Q Consensus 96 ~~k~vlv~F~a-----~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~---~~~~~~~i~----~~~~Gk~ 158 (183)
...+|+| |+. ||||.|+.....|.+. ++.+-.+|++..++ .+.+..+.. +|.||+.
T Consensus 16 ~~~~Vvv-y~k~t~~~p~Cp~C~~ak~~L~~~------gi~~~~~dI~~~~~~~~~l~~~~g~~tvP~ifi~g~~ 83 (109)
T 3ipz_A 16 NSEKVVL-FMKGTRDFPMCGFSNTVVQILKNL------NVPFEDVNILENEMLRQGLKEYSNWPTFPQLYIGGEF 83 (109)
T ss_dssp TSSSEEE-EESBCSSSBSSHHHHHHHHHHHHT------TCCCEEEEGGGCHHHHHHHHHHHTCSSSCEEEETTEE
T ss_pred ccCCEEE-EEecCCCCCCChhHHHHHHHHHHc------CCCcEEEECCCCHHHHHHHHHHHCCCCCCeEEECCEE
Confidence 4556666 544 5999999999888664 35677788887764 233332333 8899964
No 284
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=97.07 E-value=0.0011 Score=48.60 Aligned_cols=44 Identities=11% Similarity=0.199 Sum_probs=37.4
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHH-HHHHHHhcCCeEEEEEEcCC
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKL-EKLAAEFDTKLKFYYVDVNK 139 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l-~~la~~~~~~v~~~~vd~d~ 139 (183)
..++++|+||..+||+|..+.+.+ .++.+++.+++.+..+.+.-
T Consensus 16 ~~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~~~v~~~~~~l~~ 60 (195)
T 3c7m_A 16 NADKTLIKVFSYACPFCYKYDKAVTGPVSEKVKDIVAFTPFHLET 60 (195)
T ss_dssp SCTTEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTCEEEEEECTT
T ss_pred CCCcEEEEEEeCcCcchhhCcHHHHHHHHHhCCCceEEEEEecCc
Confidence 356789999999999999999999 99999987678877777653
No 285
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=97.03 E-value=0.0045 Score=42.46 Aligned_cols=60 Identities=13% Similarity=0.108 Sum_probs=37.4
Q ss_pred CCCcEEEEEeC----CCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChH---HHHHhcCeE----EeeCCeE
Q 030114 96 LSQPILIDWMA----SWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSK---DLVKRGNIS----IWKDGEM 158 (183)
Q Consensus 96 ~~k~vlv~F~a----~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~---~~~~~~~i~----~~~~Gk~ 158 (183)
...+|+|+-.. ||||.|+.....|.+..-.+ -.|..+|++..++ .+.+..+.. +|.+|+.
T Consensus 14 ~~~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~---~~~~~~dv~~~~~~~~~l~~~sg~~tvP~vfI~g~~ 84 (121)
T 3gx8_A 14 ESAPVVLFMKGTPEFPKCGFSRATIGLLGNQGVDP---AKFAAYNVLEDPELREGIKEFSEWPTIPQLYVNKEF 84 (121)
T ss_dssp HSCSEEEEESBCSSSBCTTHHHHHHHHHHHHTBCG---GGEEEEECTTCHHHHHHHHHHHTCCSSCEEEETTEE
T ss_pred ccCCEEEEEeccCCCCCCccHHHHHHHHHHcCCCc---ceEEEEEecCCHHHHHHHHHHhCCCCCCeEEECCEE
Confidence 34556664333 59999999998887753111 1277788887764 233333333 9999964
No 286
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=97.03 E-value=0.0039 Score=50.88 Aligned_cols=96 Identities=13% Similarity=0.076 Sum_probs=64.9
Q ss_pred ecCCchhHHHHHHHhhhCCCcEEEEEeCCCCh-hhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE------
Q 030114 79 PINDSDHLDQILLRAQELSQPILIDWMASWCR-KCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS------ 151 (183)
Q Consensus 79 ~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~-~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~------ 151 (183)
+++ .+++.++. ..+.++++.|+.++|. .|+.+...+.+++.++.+++.|+.+|.+..+. +.+.+++.
T Consensus 223 elt-~~~~~~~~----~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~id~~~~~~-~~~~~gl~~~~~P~ 296 (382)
T 2r2j_A 223 EIT-FENGEELT----EEGLPFLILFHMKEDTESLEIFQNEVARQLISEKGTINFLHADCDKFRH-PLLHIQKTPADCPV 296 (382)
T ss_dssp ECC-HHHHHHHH----TTCCCEEEEEECTTCCHHHHHHHHHHHHHTGGGTTTSEEEEEETTTTHH-HHHHTTCCGGGCSE
T ss_pred ecC-hhhHHHHh----cCCCcEEEEEecCCchHHHHHHHHHHHHHHHHhCCeeEEEEEchHHhHH-HHHHcCCCccCCCE
Confidence 443 55666766 5789999999999984 45666667777777777789999999998887 88999986
Q ss_pred --EeeCCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 152 --IWKDGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 --~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
++..++. ..+... ......+.|.+|++++
T Consensus 297 i~i~~~~~~-y~~~~~-~~~~~~~~i~~F~~d~ 327 (382)
T 2r2j_A 297 IAIDSFRHM-YVFGDF-KDVLIPGKLKQFVFDL 327 (382)
T ss_dssp EEEECSSCE-EECCCS-GGGGSTTHHHHHHHHH
T ss_pred EEEEcchhc-CCCCcc-ccccCHHHHHHHHHHH
Confidence 3332332 222211 1111226788888765
No 287
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=96.79 E-value=0.01 Score=42.04 Aligned_cols=95 Identities=15% Similarity=0.154 Sum_probs=61.4
Q ss_pred EecCCchhHHHHHHHhhhCCCcEEEE-EeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEc--CCChHHHHHhcCeE---
Q 030114 78 EPINDSDHLDQILLRAQELSQPILID-WMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDV--NKVSKDLVKRGNIS--- 151 (183)
Q Consensus 78 ~~i~~~~~~~~~l~~a~~~~k~vlv~-F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~--d~~~~~~~~~~~i~--- 151 (183)
.++ +.++...+. .++-++.+. |...--..-..+.+.+.++|+++++++.|+.+|. +.... +.+.||+.
T Consensus 17 ~e~-t~en~~~~~----~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgki~Fv~vd~~~~~~~~-~l~~fGl~~~~ 90 (147)
T 3bj5_A 17 IEF-TEQTAPKIF----GGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFAFIDSDHTDNQR-ILEFFGLKKEE 90 (147)
T ss_dssp EEC-CTTTHHHHH----SSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTTCEEEEECTTCGGGHH-HHHHTTCCGGG
T ss_pred EEe-ccccHHHHh----cCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCceEEEEEecchHhHHH-HHHHcCCCccc
Confidence 344 355666666 456666554 4433334456678999999999999999999998 44444 78889988
Q ss_pred -----EeeC-CeE-EEEEe-cCcchhhHHHHHHHHHHhh
Q 030114 152 -----IWKD-GEM-KSEVI-GGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 -----~~~~-Gk~-v~~~~-G~~~~~~~~~~l~~~i~~~ 182 (183)
++.. +.. ..... +..+. +.|++|++++
T Consensus 91 ~P~v~i~~~~~~~~Ky~~~~~~~t~----~~i~~Fv~d~ 125 (147)
T 3bj5_A 91 CPAVRLITLEEEMTKYKPESEELTA----ERITEFCHRF 125 (147)
T ss_dssp CSEEEEEECSSSCEEECCSCCCCCH----HHHHHHHHHH
T ss_pred CCEEEEEecccccccCCCCcccCCH----HHHHHHHHHH
Confidence 4332 221 12211 34444 8888888875
No 288
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=96.76 E-value=0.0025 Score=43.66 Aligned_cols=63 Identities=13% Similarity=0.276 Sum_probs=40.2
Q ss_pred hhHHHHHHHhhhCCCcEEEEEeC-----CCChhhhhhhHHHHHHHHHhcCCe-EEEEEEcCCChH---HHHHhcCeE---
Q 030114 84 DHLDQILLRAQELSQPILIDWMA-----SWCRKCIYLKPKLEKLAAEFDTKL-KFYYVDVNKVSK---DLVKRGNIS--- 151 (183)
Q Consensus 84 ~~~~~~l~~a~~~~k~vlv~F~a-----~wC~~C~~~~p~l~~la~~~~~~v-~~~~vd~d~~~~---~~~~~~~i~--- 151 (183)
+.+++++ ...+|+| |.. ||||.|+.....|+++ ++ .|-.+|++.+++ .+.+..+..
T Consensus 11 ~~v~~~i-----~~~~Vvv-fsk~t~~~p~Cp~C~~ak~lL~~~------gv~~~~~vdV~~d~~~~~~l~~~tg~~tvP 78 (118)
T 2wem_A 11 EQLDALV-----KKDKVVV-FLKGTPEQPQCGFSNAVVQILRLH------GVRDYAAYNVLDDPELRQGIKDYSNWPTIP 78 (118)
T ss_dssp HHHHHHH-----HHSSEEE-EESBCSSSBSSHHHHHHHHHHHHT------TCCCCEEEESSSCHHHHHHHHHHHTCCSSC
T ss_pred HHHHHHh-----ccCCEEE-EEecCCCCCccHHHHHHHHHHHHc------CCCCCEEEEcCCCHHHHHHHHHHhCCCCcC
Confidence 3455666 3445666 555 5999999998887654 35 367788887765 122222333
Q ss_pred -EeeCCeE
Q 030114 152 -IWKDGEM 158 (183)
Q Consensus 152 -~~~~Gk~ 158 (183)
+|.+|+.
T Consensus 79 ~vfI~g~~ 86 (118)
T 2wem_A 79 QVYLNGEF 86 (118)
T ss_dssp EEEETTEE
T ss_pred eEEECCEE
Confidence 8999965
No 289
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=96.66 E-value=0.0072 Score=39.13 Aligned_cols=52 Identities=12% Similarity=0.155 Sum_probs=36.2
Q ss_pred EEEEeCCCChhh------hhhhHHHHHHHHHhcCCeEEEEEEcCCChH---HHHHhcC--eE----EeeCCeE
Q 030114 101 LIDWMASWCRKC------IYLKPKLEKLAAEFDTKLKFYYVDVNKVSK---DLVKRGN--IS----IWKDGEM 158 (183)
Q Consensus 101 lv~F~a~wC~~C------~~~~p~l~~la~~~~~~v~~~~vd~d~~~~---~~~~~~~--i~----~~~~Gk~ 158 (183)
++-|+.+||+.| +.....|++ .++.|-.+|++.+++ .+.+..+ .. +|.+|+.
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L~~------~~i~~~~~di~~~~~~~~~l~~~~g~~~~~vP~ifi~g~~ 70 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRILDG------KRIQYQLVDISQDNALRDEMRTLAGNPKATPPQIVNGNHY 70 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHHH------TTCCCEEEETTSCHHHHHHHHHHTTCTTCCSCEEEETTEE
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHHHH------CCCceEEEECCCCHHHHHHHHHHhCCCCCCCCEEEECCEE
Confidence 556899999999 666655543 246788899988754 2445555 32 8889974
No 290
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=96.53 E-value=0.021 Score=44.66 Aligned_cols=74 Identities=11% Similarity=0.119 Sum_probs=48.8
Q ss_pred CcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCCh-----------------HHHHHhcCeE------Eee
Q 030114 98 QPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVS-----------------KDLVKRGNIS------IWK 154 (183)
Q Consensus 98 k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~-----------------~~~~~~~~i~------~~~ 154 (183)
...|..|++++|+.|......|.+++.++ ++....++++..+ +.+.++++.+ ++-
T Consensus 43 ~~~VelyTs~gCp~C~~Ak~lL~~~~~~~--~vi~l~~~v~~~dylgw~D~~a~~~~~~r~~~~~~~~G~~tVyTPqI~I 120 (270)
T 2axo_A 43 KGVVELFTSQGCASCPPADEALRKMIQKG--DVVGLSYHVDYWNYLGWTDSLASKENTERQYGYMRALGRNGVYTPQAIL 120 (270)
T ss_dssp CCEEEEEECTTCTTCHHHHHHHHHHHHHT--SSEEEEEECSTTCSSSSCCTTCCHHHHHHHHHHHHHTTCSCCCSSEEEE
T ss_pred CcEEEEEeCCCCCChHHHHHHHHHhhccC--CeeeEEEEEEEecccccccchhhhhhhHHHHHHHHHhCCCcccCCEEEE
Confidence 35778899999999999999999998775 3433344433221 1256676654 788
Q ss_pred CCeEEEEEecCcchhhHHHHHHHHHH
Q 030114 155 DGEMKSEVIGGHKAWLVIEEVREMIK 180 (183)
Q Consensus 155 ~Gk~v~~~~G~~~~~~~~~~l~~~i~ 180 (183)
||+. .+.|. +. ++|.+.|.
T Consensus 121 ng~~--~v~G~-d~----~~l~~~l~ 139 (270)
T 2axo_A 121 NGRD--HVKGA-DV----RGIYDRLD 139 (270)
T ss_dssp TTTE--EEETT-CH----HHHHHHHH
T ss_pred CCEE--eecCC-CH----HHHHHHHH
Confidence 9985 23555 44 55655554
No 291
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.46 E-value=0.011 Score=39.74 Aligned_cols=53 Identities=19% Similarity=0.170 Sum_probs=36.5
Q ss_pred EEEEEeCCCChhhh------hhhHHHHHHHHHhcCCeEEEEEEcCCChH---HHHHhc--------CeE----EeeCCeE
Q 030114 100 ILIDWMASWCRKCI------YLKPKLEKLAAEFDTKLKFYYVDVNKVSK---DLVKRG--------NIS----IWKDGEM 158 (183)
Q Consensus 100 vlv~F~a~wC~~C~------~~~p~l~~la~~~~~~v~~~~vd~d~~~~---~~~~~~--------~i~----~~~~Gk~ 158 (183)
-|+.|+.+||+.|+ .+...|++ .++.|..+|++.+++ .+.+.+ +.. +|.+|+.
T Consensus 9 ~V~vy~~~~C~~C~~~~~~~~ak~~L~~------~gi~y~~vdI~~~~~~~~~l~~~~~~~~~~~~g~~tvP~vfi~g~~ 82 (111)
T 2ct6_A 9 VIRVFIASSSGFVAIKKKQQDVVRFLEA------NKIEFEEVDITMSEEQRQWMYKNVPPEKKPTQGNPLPPQIFNGDRY 82 (111)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHH------TTCCEEEEETTTCHHHHHHHHHSCCTTTCCSSSSCCSCEEEETTEE
T ss_pred EEEEEEcCCCCCcccchhHHHHHHHHHH------cCCCEEEEECCCCHHHHHHHHHHhcccccccCCCCCCCEEEECCEE
Confidence 36668999999999 56655543 247788899988764 244443 333 8889874
No 292
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=96.39 E-value=0.0079 Score=45.71 Aligned_cols=55 Identities=15% Similarity=0.167 Sum_probs=38.9
Q ss_pred CcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCCh--HHHHHhcCeE----EeeCCeE
Q 030114 98 QPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVS--KDLVKRGNIS----IWKDGEM 158 (183)
Q Consensus 98 k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~--~~~~~~~~i~----~~~~Gk~ 158 (183)
...++.|+.+||+.|+.....|++. ++.+-.+|++..+ +.+.+.++.. ++.+|+.
T Consensus 169 ~~~i~ly~~~~Cp~C~~a~~~L~~~------~i~~~~~~i~~~~~~~~l~~~~g~~~vP~~~~~g~~ 229 (241)
T 1nm3_A 169 QESISIFTKPGCPFCAKAKQLLHDK------GLSFEEIILGHDATIVSVRAVSGRTTVPQVFIGGKH 229 (241)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHH------TCCCEEEETTTTCCHHHHHHHTCCSSSCEEEETTEE
T ss_pred cceEEEEECCCChHHHHHHHHHHHc------CCceEEEECCCchHHHHHHHHhCCCCcCEEEECCEE
Confidence 4456678999999999998888764 2445567776543 3467667655 7788864
No 293
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=95.95 E-value=0.015 Score=43.29 Aligned_cols=45 Identities=18% Similarity=0.395 Sum_probs=36.7
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHH-HHHHHHh--cCCeEEEEEEcCCC
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKL-EKLAAEF--DTKLKFYYVDVNKV 140 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l-~~la~~~--~~~v~~~~vd~d~~ 140 (183)
..+..|+.|+...||+|+.+.+.+ ..+.+.| .+++.|+..++.-.
T Consensus 28 ~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~p~~ 75 (202)
T 3gha_A 28 DAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNVMFH 75 (202)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEECCCS
T ss_pred CCCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEecCcc
Confidence 567789999999999999999886 6676777 35799999887643
No 294
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=95.62 E-value=0.058 Score=41.24 Aligned_cols=94 Identities=16% Similarity=0.263 Sum_probs=60.5
Q ss_pred eEecCCchhHHHHHHHhhhCCCcEEEEEeC-CCC---hh-hhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE
Q 030114 77 LEPINDSDHLDQILLRAQELSQPILIDWMA-SWC---RK-CIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS 151 (183)
Q Consensus 77 ~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a-~wC---~~-C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~ 151 (183)
+.+++ .+++.... .+++.++.|+. +.. .. .......+.++|++++ ++.|+.+|.+.... ..+.||+.
T Consensus 118 v~e~t-~~n~~~~~-----~~~~l~~~~~~~d~~~~~~~~~~~~~~~~~~vAk~~k-ki~F~~~d~~~~~~-~l~~fgl~ 189 (250)
T 3ec3_A 118 VGHRK-TSNDAKRY-----SKRPLVVVYYSVDFSFDYRTATQFWRNKVLEVAKDFP-EYTFAIADEEDYAT-EVKDLGLS 189 (250)
T ss_dssp EEEEC-TTTHHHHS-----CSSSEEEEEECCCCSTTTHHHHHHHHHHHHHHHTTCT-TSEEEEEETTTTHH-HHHHTTCS
T ss_pred eeecC-ccchhhhh-----ccCccEEEEEecccccccchhHHHHHHHHHHHHHhhc-ceeEEEEcHHHHHH-HHHHcCCC
Confidence 44555 44555554 46777777775 333 33 4557889999999998 99999999998876 67788775
Q ss_pred --------EeeC-CeEEEEEe-cCcchhhHHHHHHHHHHhh
Q 030114 152 --------IWKD-GEMKSEVI-GGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 152 --------~~~~-Gk~v~~~~-G~~~~~~~~~~l~~~i~~~ 182 (183)
+..+ +.....+. +..+ .+.|.+|++++
T Consensus 190 ~~~~~p~~~~~~~~~~ky~~~~~~~t----~~~i~~Fv~~~ 226 (250)
T 3ec3_A 190 ESGGDVNAAILDESGKKFAMEPEEFD----SDALREFVMAF 226 (250)
T ss_dssp SCSCSCEEEEECTTSCEEECCCCSCC----HHHHHHHHHHH
T ss_pred ccCCCcEEEEEcCCCceecCCcccCC----HHHHHHHHHHH
Confidence 2222 11122222 3333 48899988765
No 295
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=95.52 E-value=0.028 Score=42.69 Aligned_cols=44 Identities=11% Similarity=0.388 Sum_probs=35.9
Q ss_pred CCCcEEEEEeCCCChhhhhhhHH-HHHHHHHh--cCCeEEEEEEcCC
Q 030114 96 LSQPILIDWMASWCRKCIYLKPK-LEKLAAEF--DTKLKFYYVDVNK 139 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~-l~~la~~~--~~~v~~~~vd~d~ 139 (183)
..+..|+.|+...||+|+.+.|. +.++.++| .+++.|+..++.-
T Consensus 38 ~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~~p~ 84 (226)
T 3f4s_A 38 KAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRHFPL 84 (226)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEECCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEeCCC
Confidence 45678999999999999999996 47888888 4678888877753
No 296
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=95.44 E-value=0.029 Score=38.38 Aligned_cols=65 Identities=12% Similarity=0.244 Sum_probs=40.9
Q ss_pred chhHHHHHHHhhhCCCcEEEEEeC-----CCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChH---HHHHhcCeE---
Q 030114 83 SDHLDQILLRAQELSQPILIDWMA-----SWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSK---DLVKRGNIS--- 151 (183)
Q Consensus 83 ~~~~~~~l~~a~~~~k~vlv~F~a-----~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~---~~~~~~~i~--- 151 (183)
.+.+++.+ ...+|+| |.- |.||.|......|.+. +-..|..+|++..++ .+.+.-+-+
T Consensus 10 ~e~i~~~i-----~~~~Vvv-F~Kgt~~~P~C~fc~~ak~lL~~~-----gv~~~~~~~v~~~~~~r~~l~~~sg~~TvP 78 (118)
T 2wul_A 10 AEQLDALV-----KKDKVVV-FLKGTPEQPQCGFSNAVVQILRLH-----GVRDYAAYNVLDDPELRQGIKDYSNWPTIP 78 (118)
T ss_dssp HHHHHHHH-----HHSSEEE-EESBCSSSBSSHHHHHHHHHHHHT-----TCCSCEEEETTSCHHHHHHHHHHHTCCSSC
T ss_pred HHHHHHHH-----hcCCEEE-EEcCCCCCCCCHHHHHHHHHHHHh-----CCcCeEeecccCCHHHHHHHHHhccCCCCC
Confidence 45677777 3455655 543 6799999988776543 211367788888765 233333322
Q ss_pred -EeeCCeE
Q 030114 152 -IWKDGEM 158 (183)
Q Consensus 152 -~~~~Gk~ 158 (183)
+|.+|+-
T Consensus 79 qIFI~g~~ 86 (118)
T 2wul_A 79 QVYLNGEF 86 (118)
T ss_dssp EEEETTEE
T ss_pred eEeECCEE
Confidence 9999975
No 297
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=95.36 E-value=0.028 Score=41.13 Aligned_cols=43 Identities=12% Similarity=0.091 Sum_probs=35.2
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHh-cCCeEEEEEEcC
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEF-DTKLKFYYVDVN 138 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~-~~~v~~~~vd~d 138 (183)
..+.+|+.|....||+|+.+.+.+.++.+++ .+++.++.-+..
T Consensus 13 ~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g~v~~v~r~~p 56 (182)
T 3gn3_A 13 HGPRLFEVFLEPTCPFSVKAFFKLDDLLAQAGEDNVTVRIRLQS 56 (182)
T ss_dssp CCSEEEEEEECTTCHHHHHHHTTHHHHHHHHCTTTEEEEEEECC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHhCCCCEEEEEEEcC
Confidence 4566789999999999999999988877776 667888877764
No 298
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=95.05 E-value=0.028 Score=44.01 Aligned_cols=40 Identities=20% Similarity=0.198 Sum_probs=31.2
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEc
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDV 137 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~ 137 (183)
+++.+|+.|+-+.||+|+.+.+.+++..+. ..+.++.+-+
T Consensus 146 ~gk~~I~vFtDp~CPYCkkl~~~l~~~l~~--~~Vr~i~~Pi 185 (273)
T 3tdg_A 146 NKDKILYIVSDPMCPHCQKELTKLRDHLKE--NTVRMVVVGW 185 (273)
T ss_dssp GTTCEEEEEECTTCHHHHHHHHTHHHHHHH--CEEEEEECCC
T ss_pred CCCeEEEEEECcCChhHHHHHHHHHHHhhC--CcEEEEEeec
Confidence 477899999999999999999999976654 4455554443
No 299
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=95.04 E-value=0.067 Score=40.84 Aligned_cols=80 Identities=16% Similarity=0.256 Sum_probs=52.7
Q ss_pred CCcEEEEEeCCCChh----hhhhhHHHHHHHHHhcCC---eEEEEEEcCCChHHHHHhcCe--E--------Ee-eCCeE
Q 030114 97 SQPILIDWMASWCRK----CIYLKPKLEKLAAEFDTK---LKFYYVDVNKVSKDLVKRGNI--S--------IW-KDGEM 158 (183)
Q Consensus 97 ~k~vlv~F~a~wC~~----C~~~~p~l~~la~~~~~~---v~~~~vd~d~~~~~~~~~~~i--~--------~~-~~Gk~ 158 (183)
+.+++|.|+.+.+.. ...+...+.++|+++.++ +.|+.+|.+.... +.+.||+ . ++ .+|+
T Consensus 129 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~~~F~~~d~~~~~~-~~~~fgl~~~~~~~P~v~i~~~~~~- 206 (252)
T 2h8l_A 129 GKDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTFSH-ELSDFGLESTAGEIPVVAIRTAKGE- 206 (252)
T ss_dssp SSSEEEEEECCBTTTBHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETTTTHH-HHGGGTCCCCSCSSCEEEEECTTSC-
T ss_pred CCCeEEEEeecchhhcchhHHHHHHHHHHHHHHccccCceEEEEEEchHHHHH-HHHHcCCCCccCCCCEEEEEeCcCc-
Confidence 456666676543321 224677888899999766 9999999998887 8899999 4 33 2343
Q ss_pred EEEEecCcchhhHHHH--HHHHHHhh
Q 030114 159 KSEVIGGHKAWLVIEE--VREMIKKF 182 (183)
Q Consensus 159 v~~~~G~~~~~~~~~~--l~~~i~~~ 182 (183)
...+.+..+. +. |.+|++++
T Consensus 207 ky~~~~~~t~----~~~~i~~F~~~~ 228 (252)
T 2h8l_A 207 KFVMQEEFSR----DGKALERFLQDY 228 (252)
T ss_dssp EEECCSCCCT----TSHHHHHHHHHH
T ss_pred EecCCcccCc----chHHHHHHHHHH
Confidence 2333344444 55 77777764
No 300
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=94.95 E-value=0.088 Score=41.43 Aligned_cols=75 Identities=13% Similarity=0.174 Sum_probs=50.1
Q ss_pred cccceeeccccCCCCCCCccceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEE
Q 030114 56 ARRDVRVEALWPDLSRPTSVELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYV 135 (183)
Q Consensus 56 ~~r~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~v 135 (183)
+.|.......|.....+.. +..+.+.+++++.+. ..++++++.|... ....+.|.++|..+.+++.|+.+
T Consensus 126 G~r~~~~i~~fl~~~~~~~--v~~i~~~~~l~~~l~---~~~~~~vi~fs~~-----~~~~~~f~~~A~~~~~~~~F~~v 195 (298)
T 3ed3_A 126 GARTLAPIVDFSLSRIRSY--VKKFVRIDTLGSLLR---KSPKLSVVLFSKQ-----DKISPVYKSIALDWLGKFDFYSI 195 (298)
T ss_dssp SCCSHHHHHHHHHTTCCCC--EEECSCGGGHHHHHT---SCSSEEEEEEESS-----SSCCHHHHHHHHHTBTTEEEEEE
T ss_pred CCcCHHHHHHHHHHhcccc--cEEcCCHHHHHHHHh---cCCceEEEEEcCC-----CcchHHHHHHHHHhhcCcEEEEE
Confidence 4444444444433334433 667888889998883 2356777776332 34568999999999899999999
Q ss_pred EcCCC
Q 030114 136 DVNKV 140 (183)
Q Consensus 136 d~d~~ 140 (183)
+-++.
T Consensus 196 ~~~~~ 200 (298)
T 3ed3_A 196 SNKKL 200 (298)
T ss_dssp EGGGC
T ss_pred cchHh
Confidence 86543
No 301
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=94.94 E-value=0.058 Score=34.13 Aligned_cols=32 Identities=19% Similarity=0.255 Sum_probs=24.5
Q ss_pred EEEEeCC----CChhhhhhhHHHHHHHHHhcCCeEEEEEEcC
Q 030114 101 LIDWMAS----WCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN 138 (183)
Q Consensus 101 lv~F~a~----wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d 138 (183)
++.|+.+ ||+.|+.....|++. ++.+-.+|++
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~~------gi~y~~idI~ 37 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTVK------KQPFEFINIM 37 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHHT------TCCEEEEESC
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHHc------CCCEEEEEee
Confidence 4558899 999999988777653 3556777887
No 302
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=94.87 E-value=0.068 Score=38.68 Aligned_cols=43 Identities=21% Similarity=0.464 Sum_probs=34.5
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHH-HHHHHHhc--CCeEEEEEEcC
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKL-EKLAAEFD--TKLKFYYVDVN 138 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l-~~la~~~~--~~v~~~~vd~d 138 (183)
..+..|+.|+.+-||+|..+.+.+ ..+.++|. +++.+....+.
T Consensus 10 ~a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~~~p 55 (186)
T 3bci_A 10 NGKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVNLA 55 (186)
T ss_dssp -CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEECC
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHHHHhccCCeEEEEEEecC
Confidence 567789999999999999999998 57877774 46777777664
No 303
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=94.84 E-value=0.037 Score=45.08 Aligned_cols=60 Identities=15% Similarity=0.198 Sum_probs=33.8
Q ss_pred CCcEEEEEeCCCChhhhhhhH-HHHHHHHHhcCCeEEEEEEc-CCChH---HHHHhcCeE----EeeCCeE
Q 030114 97 SQPILIDWMASWCRKCIYLKP-KLEKLAAEFDTKLKFYYVDV-NKVSK---DLVKRGNIS----IWKDGEM 158 (183)
Q Consensus 97 ~k~vlv~F~a~wC~~C~~~~p-~l~~la~~~~~~v~~~~vd~-d~~~~---~~~~~~~i~----~~~~Gk~ 158 (183)
...|+| |+.+|||.|+.... .|+++.-.| ..+.++.+|- +..++ .+.+..+.+ +|-+|+.
T Consensus 260 ~~~VvV-Ysk~~CPyC~~Ak~~LL~~~gV~y-~eidVlEld~~~~~~e~~~~L~~~tG~~TVPqVFI~Gk~ 328 (362)
T 2jad_A 260 ENEIFV-ASKTYCPYSHAALNTLFEKLKVPR-SKVLVLQLNDMKEGADIQAALYEINGQRTVPNIYINGKH 328 (362)
T ss_dssp TCSEEE-EECTTCHHHHHHHHHHHTTTCCCT-TTEEEEEGGGSTTHHHHHHHHHHHHCCCSSCEEEETTEE
T ss_pred cCCEEE-EEcCCCcchHHHHHHHHHHcCCCc-ceEEEEEeccccCCHHHHHHHHHHHCCCCcCEEEECCEE
Confidence 445544 89999999998775 455443223 2344433332 22222 244445554 8899974
No 304
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=94.63 E-value=0.088 Score=39.22 Aligned_cols=43 Identities=12% Similarity=0.140 Sum_probs=34.7
Q ss_pred CCCcEEEEEeCCCChhhhhhhHHHHHHHH-Hh--cCCeEEEEEEcC
Q 030114 96 LSQPILIDWMASWCRKCIYLKPKLEKLAA-EF--DTKLKFYYVDVN 138 (183)
Q Consensus 96 ~~k~vlv~F~a~wC~~C~~~~p~l~~la~-~~--~~~v~~~~vd~d 138 (183)
..+.+|+.|+..-||+|+.+.+.+....+ +| .+++.++..+..
T Consensus 14 ~a~vtivef~D~~Cp~C~~~~~~~~~~l~~~~i~~g~v~~v~r~~p 59 (205)
T 3gmf_A 14 AAKLRLVEFVSYTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRNFV 59 (205)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSEEEEEEECC
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhccCCeEEEEEEeCC
Confidence 45678999999999999999998765555 77 577888888764
No 305
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=94.10 E-value=0.077 Score=38.88 Aligned_cols=44 Identities=18% Similarity=0.342 Sum_probs=34.6
Q ss_pred CCCcEEEEEe-CCCChhhh-hhhHHHHHHHHHh-cC-Ce-EEEEEEcCC
Q 030114 96 LSQPILIDWM-ASWCRKCI-YLKPKLEKLAAEF-DT-KL-KFYYVDVNK 139 (183)
Q Consensus 96 ~~k~vlv~F~-a~wC~~C~-~~~p~l~~la~~~-~~-~v-~~~~vd~d~ 139 (183)
.++++|+.|| ..|||.|. ...+.|.+.+.++ +. ++ .++.|.+|.
T Consensus 42 ~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~~~V~gvS~D~ 90 (182)
T 1xiy_A 42 NNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFDDIYCITNND 90 (182)
T ss_dssp TTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCCSEEEEEESSC
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeCCC
Confidence 5677777775 68999999 8999999999888 54 46 477777764
No 306
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=93.92 E-value=0.17 Score=34.29 Aligned_cols=34 Identities=15% Similarity=0.156 Sum_probs=24.6
Q ss_pred EEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCC
Q 030114 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKV 140 (183)
Q Consensus 101 lv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~ 140 (183)
+..|+.|+|+.|+.....|++. ++.|-.+|+.+.
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~~------gi~y~~~di~~~ 40 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLEDH------GIDYTFHDYKKE 40 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH------TCCEEEEEHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHc------CCcEEEEeeeCC
Confidence 5568899999999988777653 345556777543
No 307
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=93.59 E-value=0.24 Score=33.87 Aligned_cols=57 Identities=12% Similarity=0.142 Sum_probs=35.8
Q ss_pred EEEEEeCCCChhhhhhhH--HHHHHHHHhcCCeEEEEEEcCCChH---HHHHhc--------CeE----EeeCCeE
Q 030114 100 ILIDWMASWCRKCIYLKP--KLEKLAAEFDTKLKFYYVDVNKVSK---DLVKRG--------NIS----IWKDGEM 158 (183)
Q Consensus 100 vlv~F~a~wC~~C~~~~p--~l~~la~~~~~~v~~~~vd~d~~~~---~~~~~~--------~i~----~~~~Gk~ 158 (183)
||+.|+++.||.|+-... ....+-+. .++.|-.+|++.+++ .+.++. |.. ||-+|+.
T Consensus 1 ~V~vYtt~~c~~c~~kk~c~~aK~lL~~--kgV~feEidI~~d~~~r~eM~~~~~~~~~~~~G~~tvPQIFi~~~~ 74 (121)
T 1u6t_A 1 VIRVYIASSSGSTAIKKKQQDVLGFLEA--NKIGFEEKDIAANEENRKWMRENVPENSRPATGYPLPPQIFNESQY 74 (121)
T ss_dssp CEEEEECTTCSCHHHHHHHHHHHHHHHH--TTCCEEEEECTTCHHHHHHHHHHSCGGGSCSSSSCCSCEEEETTEE
T ss_pred CEEEEecCCCCCccchHHHHHHHHHHHH--CCCceEEEECCCCHHHHHHHHHhccccccccCCCcCCCEEEECCEE
Confidence 466789999999942211 12222222 458899999988754 244455 333 8888864
No 308
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=93.35 E-value=0.079 Score=45.58 Aligned_cols=64 Identities=16% Similarity=0.340 Sum_probs=39.2
Q ss_pred hhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCC--hHHHHHh----cCeE----Ee
Q 030114 84 DHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKV--SKDLVKR----GNIS----IW 153 (183)
Q Consensus 84 ~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~--~~~~~~~----~~i~----~~ 153 (183)
+.+++.+ .. .. ++.|+.+|||.|+.....|++.. +.+-.+|++.. ...+.+. .+.. +|
T Consensus 9 ~~v~~~i----~~-~~-v~vy~~~~Cp~C~~~k~~L~~~~------i~~~~~dv~~~~~~~~~~~~l~~~~g~~tvP~v~ 76 (598)
T 2x8g_A 9 QWLRKTV----DS-AA-VILFSKTTCPYCKKVKDVLAEAK------IKHATIELDQLSNGSAIQKCLASFSKIETVPQMF 76 (598)
T ss_dssp HHHHHHH----HH-CS-EEEEECTTCHHHHHHHHHHHHTT------CCCEEEEGGGSTTHHHHHHHTHHHHSCCCSCEEE
T ss_pred HHHHHHh----cc-CC-EEEEECCCChhHHHHHHHHHHCC------CCcEEEEcccCcchHHHHHHHHHHhCCceeCEEE
Confidence 5566666 22 33 55599999999999988887542 33445666543 1113333 3333 88
Q ss_pred eCCeEE
Q 030114 154 KDGEMK 159 (183)
Q Consensus 154 ~~Gk~v 159 (183)
-+|+.+
T Consensus 77 i~g~~i 82 (598)
T 2x8g_A 77 VRGKFI 82 (598)
T ss_dssp ETTEEE
T ss_pred ECCEEE
Confidence 898753
No 309
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=93.16 E-value=0.074 Score=38.62 Aligned_cols=45 Identities=11% Similarity=0.090 Sum_probs=35.8
Q ss_pred CCCcEEEEEe-CCCChhhhhhhHHHHHHHHHhc-CCeE-EEEEEcCCC
Q 030114 96 LSQPILIDWM-ASWCRKCIYLKPKLEKLAAEFD-TKLK-FYYVDVNKV 140 (183)
Q Consensus 96 ~~k~vlv~F~-a~wC~~C~~~~p~l~~la~~~~-~~v~-~~~vd~d~~ 140 (183)
.++++|+.|| ..|||.|....+.|.+.+.+++ .++. ++.|.+|..
T Consensus 41 ~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D~~ 88 (171)
T 2xhf_A 41 RGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVNDP 88 (171)
T ss_dssp TTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESSCH
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCH
Confidence 5677888777 5799999999999999988885 3574 888888743
No 310
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=91.45 E-value=0.27 Score=33.82 Aligned_cols=34 Identities=15% Similarity=0.271 Sum_probs=25.9
Q ss_pred EEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCC
Q 030114 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKV 140 (183)
Q Consensus 101 lv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~ 140 (183)
++.|+.++|+.|+.....|++. ++.+-.+|+++.
T Consensus 3 i~lY~~~~C~~C~ka~~~L~~~------gi~y~~~di~~~ 36 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLEEH------EIPFVERNIFSE 36 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCEEEEETTTS
T ss_pred EEEEeCCCChHHHHHHHHHHHc------CCceEEEEccCC
Confidence 4568899999999988777653 356667788765
No 311
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=90.79 E-value=0.54 Score=31.81 Aligned_cols=37 Identities=22% Similarity=0.459 Sum_probs=30.6
Q ss_pred CcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcC
Q 030114 98 QPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVN 138 (183)
Q Consensus 98 k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d 138 (183)
|.++|.|.-|-|+-|+.....+.++ .+++.+.+||+-
T Consensus 2 K~tLILfGKP~C~vCe~~s~~l~~l----edeY~ilrVNIl 38 (124)
T 2g2q_A 2 KNVLIIFGKPYCSICENVSDAVEEL----KSEYDILHVDIL 38 (124)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHTT----TTTEEEEEEECC
T ss_pred CceEEEeCCCccHHHHHHHHHHHHh----hccccEEEEEee
Confidence 5689999999999999988887444 466789999974
No 312
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=88.63 E-value=0.65 Score=31.38 Aligned_cols=34 Identities=12% Similarity=0.288 Sum_probs=25.7
Q ss_pred EEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCC
Q 030114 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKV 140 (183)
Q Consensus 101 lv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~ 140 (183)
+..|+.|+|+.|+.....|++ .++.|-.+|+.+.
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~------~gi~~~~~di~~~ 35 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAWLNR------HDVVFQEHNIMTS 35 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH------TTCCEEEEETTTS
T ss_pred EEEEeCCCCHHHHHHHHHHHH------cCCCeEEEecccC
Confidence 456889999999998877754 2466777888765
No 313
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=86.90 E-value=0.51 Score=31.51 Aligned_cols=34 Identities=15% Similarity=0.244 Sum_probs=25.0
Q ss_pred EEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCC
Q 030114 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKV 140 (183)
Q Consensus 101 lv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~ 140 (183)
+..|+.|+|+.|+.....|++ .++.|-.+|+.+.
T Consensus 2 i~iY~~~~C~~C~kak~~L~~------~gi~~~~~di~~~ 35 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLDE------HKVAYDFHDYKAV 35 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHH------TTCCEEEEEHHHH
T ss_pred EEEEECCCChHHHHHHHHHHH------CCCceEEEeecCC
Confidence 456889999999998877765 2366667777644
No 314
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=85.04 E-value=1.8 Score=31.65 Aligned_cols=38 Identities=29% Similarity=0.400 Sum_probs=31.4
Q ss_pred cEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEE
Q 030114 99 PILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVD 136 (183)
Q Consensus 99 ~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd 136 (183)
..|..|+.+-||.|-...|.++++.+.+.+++.+...-
T Consensus 3 ~~I~~~~D~~CP~cy~~~~~l~~l~~~~~~~v~v~~~p 40 (208)
T 3kzq_A 3 IKLYYVHDPMCSWCWGYKPTIEKLKQQLPGVIQFEYVV 40 (208)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHSCTTSEEEEEE
T ss_pred eEEEEEECCCCchhhhhhHHHHHHHHhCCCCceEEEEe
Confidence 35778999999999999999999999986566665544
No 315
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=84.22 E-value=1.6 Score=29.48 Aligned_cols=35 Identities=23% Similarity=0.398 Sum_probs=25.9
Q ss_pred EEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCCh
Q 030114 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVS 141 (183)
Q Consensus 101 lv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~ 141 (183)
+..|+.|+|+.|+.....|++- ++.|-.+|+.+.+
T Consensus 5 i~iY~~~~C~~c~ka~~~L~~~------gi~~~~~di~~~~ 39 (120)
T 3fz4_A 5 LTFYEYPKCSTCRRAKAELDDL------AWDYDAIDIKKNP 39 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH------TCCEEEEETTTSC
T ss_pred EEEEeCCCChHHHHHHHHHHHc------CCceEEEEeccCc
Confidence 4457899999999988777542 3567778887663
No 316
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=82.53 E-value=3.7 Score=29.85 Aligned_cols=39 Identities=21% Similarity=0.405 Sum_probs=29.7
Q ss_pred CcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEE
Q 030114 98 QPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVD 136 (183)
Q Consensus 98 k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd 136 (183)
...|..|+..-||.|-...+.+.++.+.+..++.+....
T Consensus 7 ~~~I~~f~D~~CP~C~~~~~~~~~l~~~~~~~v~v~~~~ 45 (216)
T 2in3_A 7 KPVLWYIADPMCSWCWGFAPVIENIRQEYSAFLTVKIMP 45 (216)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred ceeEEEEECCCCchhhcchHHHHHHHhcCCCCeEEEEee
Confidence 456788899999999999999999988543356555544
No 317
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=82.35 E-value=1.2 Score=30.04 Aligned_cols=35 Identities=11% Similarity=0.095 Sum_probs=25.9
Q ss_pred EEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCCh
Q 030114 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVS 141 (183)
Q Consensus 101 lv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~ 141 (183)
+..|+.|+|+.|+.....|++ .++.|-.+|+.+.+
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~------~gi~~~~~di~~~~ 40 (120)
T 3gkx_A 6 TLFLQYPACSTCQKAKKWLIE------NNIEYTNRLIVDDN 40 (120)
T ss_dssp CEEEECTTCHHHHHHHHHHHH------TTCCCEEEETTTTC
T ss_pred EEEEECCCChHHHHHHHHHHH------cCCceEEEecccCc
Confidence 456889999999998877654 24667778886653
No 318
>3fhk_A UPF0403 protein YPHP; disulfide isomerase, thioredoxin superfamily, CXC motif, structural genomics, surface entropy reduction, Ser, PSI-2; 2.30A {Bacillus subtilis}
Probab=81.82 E-value=11 Score=26.25 Aligned_cols=104 Identities=11% Similarity=0.133 Sum_probs=59.9
Q ss_pred cceEecCCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhh-hhHHHHHHHHHhcC-CeEEEEEEcCCChHH--HHHhcCe
Q 030114 75 VELEPINDSDHLDQILLRAQELSQPILIDWMASWCRKCIY-LKPKLEKLAAEFDT-KLKFYYVDVNKVSKD--LVKRGNI 150 (183)
Q Consensus 75 ~~~~~i~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~-~~p~l~~la~~~~~-~v~~~~vd~d~~~~~--~~~~~~i 150 (183)
..+.++++.++.++.+.. ....++| +-.+-||---. .+|-.....-.+.. .=.++.|=...+.+. -++.|-.
T Consensus 26 ~Gf~eL~T~e~Vd~a~~~---~~GTtlV-vVNSVCGCAag~ARPaa~~a~l~~~kkPD~lvTVFAGqDkEAt~~aR~yf~ 101 (147)
T 3fhk_A 26 AGFEELTTAEEVENFMEK---AEGTTLV-VVNSVCGCAAGLARPAATQAVLQNDKTPDNTVTVFAGQDKEATAKMREYFT 101 (147)
T ss_dssp TTCEECCSHHHHHHHHHH---CCSEEEE-EEECSSHHHHHTHHHHHHHHHHHCSSCCSEEEEEETTTSHHHHHHHHTTST
T ss_pred hCccccCCHHHHHHHHhc---CCCcEEE-EEeccccccccccCHHHHHHhhhcCCCCCceEEeccCCCHHHHHHHHHhcC
Confidence 457889999999999842 1333333 55677874433 34555444233321 134555555555442 2333321
Q ss_pred E---------EeeCCeEEEEEe----cCcchhhHHHHHHHHHHhh
Q 030114 151 S---------IWKDGEMKSEVI----GGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 151 ~---------~~~~Gk~v~~~~----G~~~~~~~~~~l~~~i~~~ 182 (183)
. +||||+.++-+. -.++.+.+.+.|...++++
T Consensus 102 ~~pPSSPS~ALfKdGelVh~ieRh~IEGr~a~~Ia~~L~~afd~~ 146 (147)
T 3fhk_A 102 GAAPSSPSMALLKGKEVVHFIPRHEIEGHDMEEIMKNLTAAFDAH 146 (147)
T ss_dssp TCCCCSSEEEEEETTEEEEEECGGGTTTSCHHHHHHHHHHHHHHH
T ss_pred CCCCCCchheeeeCCEEEEEeehhhcCCCCHHHHHHHHHHHHHhh
Confidence 1 999999987543 3345556777777776664
No 319
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=80.52 E-value=1.1 Score=31.15 Aligned_cols=34 Identities=0% Similarity=-0.195 Sum_probs=25.0
Q ss_pred EEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCC
Q 030114 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKV 140 (183)
Q Consensus 101 lv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~ 140 (183)
+..|+.|+|+.|+.....|++ .++.|-.+|+.+.
T Consensus 4 itiY~~p~C~~crkak~~L~~------~gi~~~~idi~~~ 37 (141)
T 1s3c_A 4 ITIYHNPASGTSRNTLEMIRN------SGTEPTIILYLEN 37 (141)
T ss_dssp CEEECCTTCHHHHHHHHHHHH------TTCCCEEECTTTS
T ss_pred EEEEECCCChHHHHHHHHHHH------cCCCEEEEECCCC
Confidence 345789999999998877654 2366677888765
No 320
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=77.84 E-value=8.3 Score=28.59 Aligned_cols=85 Identities=8% Similarity=0.149 Sum_probs=52.0
Q ss_pred CchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhc--CCeEEEEEEcCCChHHHHHhcCeE-------E
Q 030114 82 DSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFD--TKLKFYYVDVNKVSKDLVKRGNIS-------I 152 (183)
Q Consensus 82 ~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~--~~v~~~~vd~d~~~~~~~~~~~i~-------~ 152 (183)
+.+++...+.. +..+++.+.|....|.. ..+++-.+. +.+.+..++ +.... ++++|+|+ +
T Consensus 144 ~~~~l~~~~~~--~~~~~~al~f~~~~~~~-------~~~~~~d~~~~~~i~v~~~~-~~~~~-l~~~f~v~~~Pslvl~ 212 (244)
T 3q6o_A 144 XLEEIDGFFAR--NNEEYLALIFEXGGSYL-------AREVALDLSQHKGVAVRRVL-NTEAN-VVRKFGVTDFPSCYLL 212 (244)
T ss_dssp CHHHHHTHHHH--CCCSEEEEEEECTTCCH-------HHHHHHHTTTCTTEEEEEEE-TTCHH-HHHHHTCCCSSEEEEE
T ss_pred cHHHHHHHhhc--CCCceEEEEEEECCcch-------HHHHHHHhccCCceEEEEEe-CchHH-HHHHcCCCCCCeEEEE
Confidence 45677777753 46677888888776433 333444443 456665555 33444 99999999 5
Q ss_pred eeCCeEEEEEecCcchhhHHHHHHHHHHh
Q 030114 153 WKDGEMKSEVIGGHKAWLVIEEVREMIKK 181 (183)
Q Consensus 153 ~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~ 181 (183)
.+||+........... +.+..+|++
T Consensus 213 ~~~g~~~~~~~~~~~r----~~~~~~l~~ 237 (244)
T 3q6o_A 213 FRNGSVSRVPVLMESR----SFYTAYLQR 237 (244)
T ss_dssp ETTSCEEECCCSSSSH----HHHHHHHHT
T ss_pred eCCCCeEeeccccccH----HHHHHHHHh
Confidence 5677765544444444 566666654
No 321
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=71.13 E-value=2 Score=29.01 Aligned_cols=44 Identities=11% Similarity=0.077 Sum_probs=30.0
Q ss_pred EEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChH------HHHHhcCe
Q 030114 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSK------DLVKRGNI 150 (183)
Q Consensus 101 lv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~------~~~~~~~i 150 (183)
+..|+.|+|+.|+.....|++ .++.|-.+|+.+.+. .+....+.
T Consensus 7 i~iY~~p~C~~c~ka~~~L~~------~gi~~~~~di~~~~~~~~eL~~~l~~~g~ 56 (121)
T 3rdw_A 7 VTIYHNPRCSKSRETLALVEQ------QGITPQVVLYLETPPSVDKLKELLQQLGF 56 (121)
T ss_dssp CEEECCTTCHHHHHHHHHHHT------TTCCCEEECTTTSCCCHHHHHHHHHHTTC
T ss_pred EEEEECCCCHHHHHHHHHHHH------cCCCcEEEeeccCCCcHHHHHHHHHhcCC
Confidence 456889999999998866643 245667788876531 35556655
No 322
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=69.53 E-value=2.8 Score=28.11 Aligned_cols=33 Identities=12% Similarity=0.089 Sum_probs=23.3
Q ss_pred EEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCC
Q 030114 101 LIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNK 139 (183)
Q Consensus 101 lv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~ 139 (183)
+..|+.|+|+.|+.....|++ .++.|-.+|+.+
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~------~gi~~~~~di~~ 38 (119)
T 3f0i_A 6 VVIYHNPKCSKSRETLALLEN------QGIAPQVIKYLE 38 (119)
T ss_dssp CEEECCTTCHHHHHHHHHHHH------TTCCCEEECHHH
T ss_pred EEEEECCCChHHHHHHHHHHH------cCCceEEEEecc
Confidence 455789999999998877754 235555666654
No 323
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=61.75 E-value=13 Score=26.74 Aligned_cols=35 Identities=14% Similarity=0.231 Sum_probs=27.9
Q ss_pred EEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEE
Q 030114 100 ILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYY 134 (183)
Q Consensus 100 vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~ 134 (183)
.|..|+-.-||.|-...+.++++.+.++-.+.+--
T Consensus 2 ~I~~~~D~~CP~cy~~~~~l~~~~~~~~~~v~~~p 36 (203)
T 2imf_A 2 IVDFYFDFLSPFSYLANQRLSKLAQDYGLTIRYNA 36 (203)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHCCEEEEEE
T ss_pred eEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEe
Confidence 36678899999999999999999999853444433
No 324
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=60.12 E-value=48 Score=27.15 Aligned_cols=53 Identities=19% Similarity=0.179 Sum_probs=34.4
Q ss_pred CeEEEEEEcCCC-hH-HHHHhcCeE-----------EeeCCeEEEEEecCcchhhHHHHHHHHHHh
Q 030114 129 KLKFYYVDVNKV-SK-DLVKRGNIS-----------IWKDGEMKSEVIGGHKAWLVIEEVREMIKK 181 (183)
Q Consensus 129 ~v~~~~vd~d~~-~~-~~~~~~~i~-----------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~ 181 (183)
.+++.-+-|--+ |. .-...+||. +|++|+.+.++.+..-.+.+.+.+++++++
T Consensus 335 ~l~VAVMGCvVNGPGEa~~ADiGi~~~G~G~~~~~~lf~~G~~~~~v~~~~iv~~l~~~i~~~~~~ 400 (406)
T 4g9p_A 335 ELKVAVMGCVVNGPGESKHAHIGISLPGAGEEPKAPVYADGKLLTILKGEGIAEEFLRLVEDYVKT 400 (406)
T ss_dssp GCEEEEESSTTTHHHHHHHSSEEEECCCTTSCSEEEEEETTEEEEEEESSCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCcccCcchhhhcCcCcccCCCCCCCeeeEEECCEEEEecCHHHHHHHHHHHHHHHHHH
Confidence 477888877776 32 222345553 999999999888876665555555555543
No 325
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=55.76 E-value=12 Score=30.35 Aligned_cols=74 Identities=15% Similarity=0.175 Sum_probs=39.6
Q ss_pred eCCCChhhhhhhHHH-HHHHHHh---cCCeEEEEEEcCCC-hH-HHHHhcCeE-------EeeCCeEEEEEecCcchhhH
Q 030114 105 MASWCRKCIYLKPKL-EKLAAEF---DTKLKFYYVDVNKV-SK-DLVKRGNIS-------IWKDGEMKSEVIGGHKAWLV 171 (183)
Q Consensus 105 ~a~wC~~C~~~~p~l-~~la~~~---~~~v~~~~vd~d~~-~~-~~~~~~~i~-------~~~~Gk~v~~~~G~~~~~~~ 171 (183)
.=|.|+.|..-...+ +++.+.. +..+++.-+-|--+ |. .--..++|. +|++|+.+.++.+..-.
T Consensus 273 SCPtCGRt~~dl~~~~~~ie~~l~~~~~~lkVAVMGCvVNGPGEa~~ADiGiagg~~~~~lf~~Ge~v~~v~~~~~~--- 349 (366)
T 3noy_A 273 ACPTCGRIEVDLPKVVKEVQEKLSGVKTPLKVAVMGCVVNAIGEAREADIGLACGRGFAWLFKHGKPIKKVDESEMV--- 349 (366)
T ss_dssp ECCCCTTCCSCHHHHHHHHHHHTTTCCSCCEEEEESSSHHHHHHTTTCSEEEEECSSEEEEEETTEEEEEEESCHHH---
T ss_pred ECCCCCCccccHHHHHHHHHHHHhCCCCCCEEEEEcccccCCchhhhCCEeEecCCCceEEEECCEEeeecCHHHHH---
Confidence 446666665432222 2222222 23577777776644 22 112234444 99999998876655444
Q ss_pred HHHHHHHHHhh
Q 030114 172 IEEVREMIKKF 182 (183)
Q Consensus 172 ~~~l~~~i~~~ 182 (183)
++|.+.|+++
T Consensus 350 -~~l~~~I~~~ 359 (366)
T 3noy_A 350 -DELLKEIQNM 359 (366)
T ss_dssp -HHHHHHHHC-
T ss_pred -HHHHHHHHHH
Confidence 6666666654
No 326
>1t4y_A Adaptive-response sensory-kinase SASA; alpha/beta protein, thioredoxin fold, transferase; NMR {Synechococcus elongatus} SCOP: c.47.1.15 PDB: 1t4z_A
Probab=54.27 E-value=43 Score=21.96 Aligned_cols=75 Identities=9% Similarity=0.164 Sum_probs=58.5
Q ss_pred EEEEEeCCCChhhhhhhHHHHHHHHHh--cCCeEEEEEEcCCChHHHHHhcCeE----Eee-CCeEEEEEecCcchhhHH
Q 030114 100 ILIDWMASWCRKCIYLKPKLEKLAAEF--DTKLKFYYVDVNKVSKDLVKRGNIS----IWK-DGEMKSEVIGGHKAWLVI 172 (183)
Q Consensus 100 vlv~F~a~wC~~C~~~~p~l~~la~~~--~~~v~~~~vd~d~~~~~~~~~~~i~----~~~-~Gk~v~~~~G~~~~~~~~ 172 (183)
...-|.|..-+..+.....+.++-+++ ++.+.+--||+.++|+ +++.++|- +.| -=.++.+++|..-.
T Consensus 13 L~lLyvag~tp~S~~ai~nL~~i~e~~l~~~~y~LeVIDv~eqPe-LAE~~~IvATPTLIK~~P~P~rriiGd~i~---- 87 (105)
T 1t4y_A 13 LLLQLFVDTRPLSQHIVQRVKNILAAVEATVPISLQVINVADQPQ-LVEYYRLVVTPALVKIGPGSRQVLSGIDLT---- 87 (105)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHHHHHCCSSCEEEEEEETTTCHH-HHHHTTCCSSSEEEEEESSSCEEEESSCHH----
T ss_pred hheeeEeCCCccHHHHHHHHHHHHHHhccCCceEEEEeecccCHH-HHhHcCeeeccHhhccCCCCceEEeChHHH----
Confidence 444677888888888888888887775 3469999999999999 99999998 444 34677899998765
Q ss_pred HHHHHHH
Q 030114 173 EEVREMI 179 (183)
Q Consensus 173 ~~l~~~i 179 (183)
++|+.|.
T Consensus 88 ~ql~~ww 94 (105)
T 1t4y_A 88 DQLANQL 94 (105)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 7777664
No 327
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=52.71 E-value=19 Score=23.73 Aligned_cols=60 Identities=13% Similarity=0.229 Sum_probs=40.8
Q ss_pred hHHHHHHHHHh----cCCeEEEEEEcCCChH---------HHHHhcCeE----EeeCCeEEEEEecCcchhhHHHHHHHH
Q 030114 116 KPKLEKLAAEF----DTKLKFYYVDVNKVSK---------DLVKRGNIS----IWKDGEMKSEVIGGHKAWLVIEEVREM 178 (183)
Q Consensus 116 ~p~l~~la~~~----~~~v~~~~vd~d~~~~---------~~~~~~~i~----~~~~Gk~v~~~~G~~~~~~~~~~l~~~ 178 (183)
.|.+-+++... +.++.+.+.|...+|. .+.+++|+. +.-||+++. .|..+. .++|.++
T Consensus 26 d~eL~~~~~~~~~lk~~Gi~V~RyNL~~~P~~F~~N~~V~~~L~~~G~~~LP~~~VDGevv~--~G~yPt---~eEl~~~ 100 (106)
T 3ktb_A 26 NPELMRIAVVIESLKKQGIIVTRHNLRDEPQVYVSNKTVNDFLQKHGADALPITLVDGEIAV--SQTYPT---TKQMSEW 100 (106)
T ss_dssp CHHHHHHHHHHHHHHHTTCCCEEEETTTCTTHHHHSHHHHHHHHTTCGGGCSEEEETTEEEE--CSSCCC---HHHHHHH
T ss_pred CHHHHHHHHHHHHHHHCCCEEEEEccccChHHHhcCHHHHHHHHHcCcccCCEEEECCEEEE--eccCCC---HHHHHHH
Confidence 56665555432 1468999999999874 355677776 889999865 455332 2788887
Q ss_pred HH
Q 030114 179 IK 180 (183)
Q Consensus 179 i~ 180 (183)
+.
T Consensus 101 lg 102 (106)
T 3ktb_A 101 TG 102 (106)
T ss_dssp HC
T ss_pred hC
Confidence 64
No 328
>1xg8_A Hypothetical protein SA0798; structural genomics, protein structure initative, MCSG, PSI, protein structure initiative; 2.10A {Staphylococcus aureus subsp} SCOP: c.47.1.17
Probab=51.77 E-value=45 Score=21.91 Aligned_cols=79 Identities=19% Similarity=0.394 Sum_probs=45.3
Q ss_pred CcE-EEEEeC-CCChhhhhhhH------HHHH-HHHHhcC-CeEEEEEEcCCChHH-------HHHhcCeE------Eee
Q 030114 98 QPI-LIDWMA-SWCRKCIYLKP------KLEK-LAAEFDT-KLKFYYVDVNKVSKD-------LVKRGNIS------IWK 154 (183)
Q Consensus 98 k~v-lv~F~a-~wC~~C~~~~p------~l~~-la~~~~~-~v~~~~vd~d~~~~~-------~~~~~~i~------~~~ 154 (183)
+++ ++-|.| --|..|..+-. -|+. +.++|.+ .+.|-.||+...++. ++++..-. +.-
T Consensus 6 ~~v~i~VYGAe~iCASCVnaPSSkeTyEWLqAal~RKyp~~~f~~~YIDI~~~~~~l~d~~~~~ae~I~ede~FYPlV~i 85 (111)
T 1xg8_A 6 QSNAVVVYGADVICASCVNAPTSKDIYDWLQPLLKRKYPNISFKYTYIDITKDNDNLTDHDLQFIERIEQDELFYPLITM 85 (111)
T ss_dssp SCEEEEEEECSSCCGGGSSSCCHHHHHHHHHHHHHHHCTTSCEEEEEEETTTC---CCHHHHHHHHHHHTTSSCSSEEEE
T ss_pred eEEEEEEEcccccchhccCCCCchhHHHHHHHHHhCcCCCCceEEEEEeccCCccchhHHHHHHHHHHhhccccceEEEE
Confidence 344 444444 45999987542 2332 4456743 499999999776442 22221111 778
Q ss_pred CCeEEEEEecCcchhhHHHHHHHHHHhh
Q 030114 155 DGEMKSEVIGGHKAWLVIEEVREMIKKF 182 (183)
Q Consensus 155 ~Gk~v~~~~G~~~~~~~~~~l~~~i~~~ 182 (183)
||+++.. |...- ..|-++++++
T Consensus 86 ndeiVaE--Gnp~L----K~I~~~ie~~ 107 (111)
T 1xg8_A 86 NDEYVAD--GYIQT----KQITRFIDQK 107 (111)
T ss_dssp TTEEEEE--SSCCH----HHHHHHHHHH
T ss_pred CCEEeec--CCccH----HHHHHHHHHH
Confidence 9999874 77665 5555555554
No 329
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=49.66 E-value=38 Score=28.53 Aligned_cols=67 Identities=12% Similarity=0.177 Sum_probs=41.6
Q ss_pred CchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhc--CCeEEEEEEcCCChHHHHHhcCeE-------E
Q 030114 82 DSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFD--TKLKFYYVDVNKVSKDLVKRGNIS-------I 152 (183)
Q Consensus 82 ~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~--~~v~~~~vd~d~~~~~~~~~~~i~-------~ 152 (183)
+.++++..+.. ...+++++.|.... .+...+++..+. +++.+..++ +.... ++++|+|+ +
T Consensus 144 t~~~l~~~l~~--~~~~~vallF~~~~-------s~~~~~~~ldl~~~~~v~v~~v~-~~~~~-l~~kfgV~~~Pslvl~ 212 (519)
T 3t58_A 144 KLNDIDGFFTR--NKADYLALVFERED-------SYLGREVTLDLSQYHAVAVRRVL-NTESD-LVNKFGVTDFPSCYLL 212 (519)
T ss_dssp CHHHHTTGGGS--CCCSEEEEEEECTT-------CCHHHHHHHHTTTCTTEEEEEEE-TTCHH-HHHHHTCCCSSEEEEE
T ss_pred CHHHHHHHhcc--CCCCeEEEEecCCc-------hHHHHHHHHHhhccCCeeEEEec-CchHH-HHHHcCCCCCCeEEEE
Confidence 34566666532 35667888888664 335566666664 346665544 44455 99999999 4
Q ss_pred eeCCeEE
Q 030114 153 WKDGEMK 159 (183)
Q Consensus 153 ~~~Gk~v 159 (183)
..||+..
T Consensus 213 ~~nGk~~ 219 (519)
T 3t58_A 213 LRNGSVS 219 (519)
T ss_dssp ETTSCEE
T ss_pred eCCCcee
Confidence 4566553
No 330
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=44.52 E-value=35 Score=24.35 Aligned_cols=37 Identities=11% Similarity=-0.039 Sum_probs=25.0
Q ss_pred HHHhcCeE----E--eeCCeEEEEEecCcchhhHHHHHHHHHH
Q 030114 144 LVKRGNIS----I--WKDGEMKSEVIGGHKAWLVIEEVREMIK 180 (183)
Q Consensus 144 ~~~~~~i~----~--~~~Gk~v~~~~G~~~~~~~~~~l~~~i~ 180 (183)
.+.+++|+ + +.||+.+..+.|..+.+.+.+.|.+.++
T Consensus 168 ~a~~~gv~g~Pt~~i~~~G~~~~~~~G~~~~~~l~~~l~~~~~ 210 (216)
T 2in3_A 168 RVAQWGISGFPALVVESGTDRYLITTGYRPIEALRQLLDTWLQ 210 (216)
T ss_dssp HHHHTTCCSSSEEEEEETTEEEEEESSCCCHHHHHHHHHHHHH
T ss_pred HHHHcCCcccceEEEEECCEEEEeccCCCCHHHHHHHHHHHHH
Confidence 56778888 3 4599987788899888444444444443
No 331
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=42.17 E-value=57 Score=27.19 Aligned_cols=82 Identities=18% Similarity=0.173 Sum_probs=51.5
Q ss_pred hhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE--EeeCCeE-EE
Q 030114 84 DHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS--IWKDGEM-KS 160 (183)
Q Consensus 84 ~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~--~~~~Gk~-v~ 160 (183)
+++.+.+. .-.++|.+.++...|..|..+...++++++-- +++.+...| + .. ..... +.++|+. --
T Consensus 8 ~~l~~~~~---~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~s-~~i~~~~~~-~-~~-----~~~p~~~~~~~~~~~~i 76 (521)
T 1hyu_A 8 TQLRAYLE---KLTKPVELIATLDDSAKSAEIKELLAEIAELS-DKVTFKEDN-T-LP-----VRKPSFLITNPGSQQGP 76 (521)
T ss_dssp HHHHHHHT---TCCSCEEEEEECCSSHHHHHHHHHHHHHHTTC-TTEEEEECT-T-SS-----SCSSEEEEECTTCCCSC
T ss_pred HHHHHHHH---hCCCCEEEEEEeCCCcchHHHHHHHHHHHHhC-CceEEEEcC-C-cc-----cCCCEEEEecCCCcceE
Confidence 45555553 45678888888889999999999999987553 777764322 1 10 11122 5556643 24
Q ss_pred EEecCcchhhHHHHHHHHHH
Q 030114 161 EVIGGHKAWLVIEEVREMIK 180 (183)
Q Consensus 161 ~~~G~~~~~~~~~~l~~~i~ 180 (183)
++.|.... .++..|+.
T Consensus 77 ~f~g~p~g----~e~~s~~~ 92 (521)
T 1hyu_A 77 RFAGSPLG----HEFTSLVL 92 (521)
T ss_dssp EEESCCCG----GGHHHHHH
T ss_pred EEeccCcc----hhHHHHHH
Confidence 67777776 55555554
No 332
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=39.66 E-value=20 Score=26.23 Aligned_cols=28 Identities=7% Similarity=-0.117 Sum_probs=24.3
Q ss_pred cEEEEEeCCCChhhhhhhHHHHHHHHHh
Q 030114 99 PILIDWMASWCRKCIYLKPKLEKLAAEF 126 (183)
Q Consensus 99 ~vlv~F~a~wC~~C~~~~p~l~~la~~~ 126 (183)
..|..|+-.-||.|-...+.|+++.+.+
T Consensus 6 ~~I~~~~D~~CP~Cy~~~~~l~~l~~~~ 33 (226)
T 1r4w_A 6 RVLELFYDVLSPYSWLGFEVLCRYQHLW 33 (226)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHTTTS
T ss_pred ceEEEEEeCCChHHHHHHHHHHHHHHHc
Confidence 4577788899999999999999998776
No 333
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=36.04 E-value=3.4 Score=19.90 Aligned_cols=11 Identities=27% Similarity=0.688 Sum_probs=8.9
Q ss_pred CChhhhhhhHH
Q 030114 108 WCRKCIYLKPK 118 (183)
Q Consensus 108 wC~~C~~~~p~ 118 (183)
.||.|+.++|.
T Consensus 8 qcpvcqq~mpa 18 (29)
T 3vhs_A 8 QCPVCQQMMPA 18 (29)
T ss_dssp ECTTTCCEEEG
T ss_pred eChHHHHhCcH
Confidence 59999998873
No 334
>2npb_A Selenoprotein W; structure, thioredoxin-like fold, oxidoreductase; NMR {Mus musculus}
Probab=32.15 E-value=62 Score=20.70 Aligned_cols=65 Identities=20% Similarity=0.194 Sum_probs=32.1
Q ss_pred CChhhhhhhHHH----HHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE-EeeCCeEEEEEe---cCcchhhHHHHHHHHH
Q 030114 108 WCRKCIYLKPKL----EKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS-IWKDGEMKSEVI---GGHKAWLVIEEVREMI 179 (183)
Q Consensus 108 wC~~C~~~~p~l----~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~-~~~~Gk~v~~~~---G~~~~~~~~~~l~~~i 179 (183)
.|..|..+. .. +++...|.+.+. |.+...+. .-|+. +.-||+.+.... |+.+...+.+.|++.|
T Consensus 9 YC~~C~y~~-ra~~laqeLl~~Fp~~l~---V~~~l~p~----~~G~FEV~vng~lV~SKk~~ggFP~~~el~q~I~~~i 80 (96)
T 2npb_A 9 YSGACGYKP-KYLQLKEKLEHEFPGCLD---ICGEGTPQ----VTGFFEVTVAGKLVHSKKRGDGYVDTESKFRKLVTAI 80 (96)
T ss_dssp CCCCSCHHH-HHHHHHHHHHHHSBTTEE---EEECCCSS----CCSCCEEEETTEEEEETTTTCCSSCSHHHHHHHHHHH
T ss_pred EcCCCCCHH-HHHHHHHHHHHhCCcceE---EEEEEcCC----CCcEEEEEECCEEEEEEecCCCCCChHHHHHHHHHHH
Confidence 488887544 44 444444544433 33333332 12222 566888876422 4444444555565555
Q ss_pred H
Q 030114 180 K 180 (183)
Q Consensus 180 ~ 180 (183)
+
T Consensus 81 ~ 81 (96)
T 2npb_A 81 K 81 (96)
T ss_dssp H
T ss_pred h
Confidence 4
No 335
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=30.55 E-value=1.2e+02 Score=20.02 Aligned_cols=46 Identities=13% Similarity=0.210 Sum_probs=34.0
Q ss_pred CeEEEEEEcCCChH---------HHHHhcCeE----EeeCCeEEEEEecC-cchhhHHHHHHHHHH
Q 030114 129 KLKFYYVDVNKVSK---------DLVKRGNIS----IWKDGEMKSEVIGG-HKAWLVIEEVREMIK 180 (183)
Q Consensus 129 ~v~~~~vd~d~~~~---------~~~~~~~i~----~~~~Gk~v~~~~G~-~~~~~~~~~l~~~i~ 180 (183)
++.+.+.|...+|. .+.+++|+. ++-||+++. .|. .+. ++|.+|+.
T Consensus 40 Gi~V~RyNL~~~P~aF~~N~~V~~~L~~~G~~~LP~~~VDGevv~--~G~yPt~----eEl~~~lg 99 (110)
T 3kgk_A 40 GVQIERFNLAQQPMSFVQNEKVKAFIEASGAEGLPLLLLDGETVM--AGRYPKR----AELARWFG 99 (110)
T ss_dssp TCCEEEEETTTCTTHHHHSHHHHHHHHHHCGGGCCEEEETTEEEE--ESSCCCH----HHHHHHHT
T ss_pred CCeEEEEccccChHHHhcCHHHHHHHHHcCcccCCEEEECCEEEE--eccCCCH----HHHHHHhC
Confidence 58999999999874 355667766 889999865 355 344 88888764
No 336
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=27.98 E-value=9.9 Score=18.73 Aligned_cols=18 Identities=33% Similarity=0.859 Sum_probs=15.1
Q ss_pred ChhhhhhhHHHHHHHHHh
Q 030114 109 CRKCIYLKPKLEKLAAEF 126 (183)
Q Consensus 109 C~~C~~~~p~l~~la~~~ 126 (183)
|+.|+..+|....+...|
T Consensus 6 CpvCk~q~Pd~kt~~~H~ 23 (28)
T 2jvx_A 6 CPKCQYQAPDMDTLQIHV 23 (28)
T ss_dssp CTTSSCEESSHHHHHHHH
T ss_pred CccccccCcChHHHHHHH
Confidence 999999999888877655
No 337
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=27.05 E-value=37 Score=23.98 Aligned_cols=34 Identities=18% Similarity=0.340 Sum_probs=23.2
Q ss_pred HHHhcCeE----EeeCCeEEEEEecCcchhhHHHHHHHHHHh
Q 030114 144 LVKRGNIS----IWKDGEMKSEVIGGHKAWLVIEEVREMIKK 181 (183)
Q Consensus 144 ~~~~~~i~----~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~ 181 (183)
.++++||+ |+-||+.+-...|..+. +.+.+.|+.
T Consensus 144 ~a~~~gv~GtPtfvvng~~~v~~~Ga~~~----e~~~~~i~~ 181 (185)
T 3feu_A 144 LSEKSGISSVPTFVVNGKYNVLIGGHDDP----KQIADTIRY 181 (185)
T ss_dssp HHHHHTCCSSSEEEETTTEEECGGGCSSH----HHHHHHHHH
T ss_pred HHHHcCCCccCEEEECCEEEEecCCCCCH----HHHHHHHHH
Confidence 56778888 88899865444788888 455555443
No 338
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=26.34 E-value=92 Score=22.10 Aligned_cols=38 Identities=13% Similarity=0.047 Sum_probs=25.7
Q ss_pred HHHhcCeE------EeeCCeEEEEEecCcchhhHHHHHHHHHHh
Q 030114 144 LVKRGNIS------IWKDGEMKSEVIGGHKAWLVIEEVREMIKK 181 (183)
Q Consensus 144 ~~~~~~i~------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~ 181 (183)
.+.++||+ +..+|+.+....|..+.+.+.+.|.+.+++
T Consensus 161 ~a~~~gv~g~Pt~~v~~~~~~~~~~~g~~~~e~~~~~i~~~~~~ 204 (208)
T 3kzq_A 161 LAKSLGVNSYPSLVLQINDAYFPIEVDYLSTEPTLKLIRERIIE 204 (208)
T ss_dssp HHHHTTCCSSSEEEEEETTEEEEECCCSSCSHHHHHHHHHHHHH
T ss_pred HHHHcCCCcccEEEEEECCEEEEeeCCCCCHHHHHHHHHHHHhc
Confidence 45677877 334677777788999985566666655543
No 339
>3tfg_A ALR2278 protein; heme-based sensor domain, GAS binding, signaling protein; HET: HEM; 1.90A {Nostoc SP} PDB: 3tfd_A* 3tfe_A* 3tff_A* 2o09_A* 2o0c_A* 2o0g_A* 3l6j_A* 3tf8_A* 3tf9_A* 3tfa_A*
Probab=26.17 E-value=1.2e+02 Score=21.60 Aligned_cols=43 Identities=16% Similarity=0.276 Sum_probs=36.0
Q ss_pred CCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCC
Q 030114 97 SQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNK 139 (183)
Q Consensus 97 ~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~ 139 (183)
..-..+.++++-|+-|-.+.-.++.+|+.|+..+.+-.+....
T Consensus 127 ~~~l~l~Y~S~R~gl~~~~~Gli~~~A~~f~~~v~i~~~~~~~ 169 (189)
T 3tfg_A 127 SKSMELHYQSTRCGLAPMVLGLLHGLGKRFQTKVEVTQTAFRE 169 (189)
T ss_dssp TTEEEEEEECSSSSCHHHHHHHHHHHHHHTTCEEEEEEEECTT
T ss_pred CCEEEEEEECCCCCHHHHHHHHHHHHHHHhCCCeEEEEEeccC
Confidence 4567889999999999999999999999997777777776643
No 340
>1wwj_A Circadian clock protein KAIB; 1.90A {Synechocystis SP} PDB: 1r5p_A 2qke_A 1vgl_A
Probab=26.08 E-value=1e+02 Score=20.11 Aligned_cols=53 Identities=15% Similarity=0.127 Sum_probs=42.3
Q ss_pred CcEEEEEeCCCChhhhhhhHHHHHHHHHh-cCCeEEEEEEcCCChHHHHHhcCeE
Q 030114 98 QPILIDWMASWCRKCIYLKPKLEKLAAEF-DTKLKFYYVDVNKVSKDLVKRGNIS 151 (183)
Q Consensus 98 k~vlv~F~a~wC~~C~~~~p~l~~la~~~-~~~v~~~~vd~d~~~~~~~~~~~i~ 151 (183)
..++.-|-+..-+..+.....+.++-+++ ++.+.+--||+.++|+ +++.++|-
T Consensus 7 ~~~L~LyVaG~tp~S~~ai~nL~~i~e~~l~~~y~LeVIDv~~~Pe-lAe~~~Iv 60 (105)
T 1wwj_A 7 TYVLKLYVAGNTPNSVRALKMLKNILEQEFQGVYALKVIDVLKNPQ-LAEEDKIL 60 (105)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCCS-CCTTCEEE
T ss_pred ceEEEEEEeCCCchHHHHHHHHHHHHHHhcCCCeEEEEEEcccCHh-HHhHCCeE
Confidence 45566666768888888888888876664 5679999999999998 88888776
No 341
>3szu_A ISPH, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; 3Fe-4S iron-sulfur cluster, conserved cysteine, IPP and DMAP production final STEP; HET: H6P; 1.40A {Escherichia coli} PDB: 3szl_A* 3f7t_A* 3szo_A* 3t0f_A* 3t0g_A* 3urk_A* 3utc_A* 3utd_A* 3uv3_A* 3uv6_A* 3uv7_A* 3uwm_A* 3ke8_A* 3ke9_A* 3kef_A* 3kel_A 3kem_A*
Probab=26.07 E-value=2.4e+02 Score=22.27 Aligned_cols=99 Identities=11% Similarity=0.091 Sum_probs=62.8
Q ss_pred CCchhHHHHHHHhhhCCCcEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEEcCCChH----HHHHhcCeE-----
Q 030114 81 NDSDHLDQILLRAQELSQPILIDWMASWCRKCIYLKPKLEKLAAEFDTKLKFYYVDVNKVSK----DLVKRGNIS----- 151 (183)
Q Consensus 81 ~~~~~~~~~l~~a~~~~k~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~d~~~~----~~~~~~~i~----- 151 (183)
.+.++|.+++..-...-..+.+-.+.++|..-+.=...+.+++++. + +.++--.-...+. .+|++.+..
T Consensus 181 ~s~~~~~~iv~~L~~r~p~i~~~~~ntIC~AT~~RQ~av~~lA~~v-D-~miVVGg~nSSNT~rL~eia~~~g~~ty~Ie 258 (328)
T 3szu_A 181 LSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQA-E-VVLVVGSKNSSNSNRLAELAQRMGKRAFLID 258 (328)
T ss_dssp SCHHHHHHHHHHHHHHCTTCBCCSSCSCCHHHHHHHHHHHHHHHHC-S-EEEEECCTTCHHHHHHHHHHHHTTCEEEEES
T ss_pred CcHHHHHHHHHHHHHhCcccccCCCCCcCHHHHHHHHHHHHHHHhC-C-EEEEeCCCCCchHHHHHHHHHHhCCCEEEeC
Confidence 3556676666433233333322337899999999888999999874 3 2222212222111 377777765
Q ss_pred --------EeeCCeEEEEEecCcchhhHHHHHHHHHHh
Q 030114 152 --------IWKDGEMKSEVIGGHKAWLVIEEVREMIKK 181 (183)
Q Consensus 152 --------~~~~Gk~v~~~~G~~~~~~~~~~l~~~i~~ 181 (183)
.+++-+.+.-..|..+++.+.+++.+.|++
T Consensus 259 ~~~el~~~wl~g~~~VGITAGASTP~~lieeVi~~l~~ 296 (328)
T 3szu_A 259 DAKDIQEEWVKEVKCVGVTAGASAPDILVQNVVARLQQ 296 (328)
T ss_dssp SGGGCCHHHHTTCSEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred ChHHCCHHHhCCCCEEEEeecCCCCHHHHHHHHHHHHH
Confidence 445556778888999998888888888865
No 342
>2p0g_A Selenoprotein W-related protein; VCR75, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Vibrio cholerae}
Probab=20.50 E-value=1.8e+02 Score=18.82 Aligned_cols=63 Identities=21% Similarity=0.450 Sum_probs=32.2
Q ss_pred CChhhhhhhH---HHHHHHHHhcCCeEEEEEEcCCChHHHHHhcCeE-EeeCCeEEEEEe---cCcchhhHHHHHHHHHH
Q 030114 108 WCRKCIYLKP---KLEKLAAEFDTKLKFYYVDVNKVSKDLVKRGNIS-IWKDGEMKSEVI---GGHKAWLVIEEVREMIK 180 (183)
Q Consensus 108 wC~~C~~~~p---~l~~la~~~~~~v~~~~vd~d~~~~~~~~~~~i~-~~~~Gk~v~~~~---G~~~~~~~~~~l~~~i~ 180 (183)
.|..|..+.. .-+++...|.+.+. .|... |. .-|+. +.-||+.+.... |+... ++|.+.|.
T Consensus 10 YC~~C~w~~Ra~~laqeLl~tF~~~l~--~v~l~--P~----~~G~FEV~vng~lV~SKk~~ggFPe~----~eLkq~Vr 77 (105)
T 2p0g_A 10 YCRQCNWMLRSAWLSQELLHTFSEEIE--YVALH--PD----TGGRFEIFCNGVQIWERKQEGGFPEA----KVLKQRVR 77 (105)
T ss_dssp EETTTTCHHHHHHHHHHHHHHTTTTEE--EEEEE--EE----STTCEEEEETTEEEEEHHHHTSCCCH----HHHHHHHH
T ss_pred ECCCCCChHHHHHHHHHHHHHcCcccc--eEEEE--eC----CCceEEEEECCEEEEEEecCCCCCCH----HHHHHHHH
Confidence 4777876553 22555555655543 23221 11 12333 677898876322 34444 56666665
Q ss_pred hh
Q 030114 181 KF 182 (183)
Q Consensus 181 ~~ 182 (183)
+.
T Consensus 78 d~ 79 (105)
T 2p0g_A 78 DL 79 (105)
T ss_dssp TT
T ss_pred HH
Confidence 43
Done!