Query 030119
Match_columns 182
No_of_seqs 146 out of 1336
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 14:05:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030119.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030119hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zn8_A APRT, adenine phosphori 100.0 8.5E-34 2.9E-38 216.4 16.4 176 7-182 2-180 (180)
2 2dy0_A APRT, adenine phosphori 100.0 2.2E-33 7.4E-38 216.0 18.0 176 7-182 11-188 (190)
3 1g2q_A Adenine phosphoribosylt 100.0 1.9E-33 6.5E-38 215.8 17.4 174 8-182 4-181 (187)
4 1qb7_A APRT, adenine phosphori 100.0 2.7E-33 9.1E-38 222.3 16.9 177 6-182 14-206 (236)
5 1l1q_A Adenine phosphoribosylt 100.0 1.3E-31 4.6E-36 205.4 15.9 173 9-181 3-178 (186)
6 3m3h_A OPRT, oprtase, orotate 99.9 5.4E-27 1.8E-31 185.5 13.3 139 29-181 56-198 (234)
7 1y0b_A Xanthine phosphoribosyl 99.9 1.1E-25 3.9E-30 173.6 18.5 170 9-182 6-182 (197)
8 3dez_A OPRT, oprtase, orotate 99.9 2.5E-26 8.7E-31 182.5 13.6 139 29-181 68-210 (243)
9 1vch_A Phosphoribosyltransfera 99.9 2.8E-26 9.5E-31 173.8 13.2 162 13-182 7-173 (175)
10 1o57_A PUR operon repressor; p 99.9 1E-24 3.4E-29 177.7 18.2 169 9-182 82-253 (291)
11 2p1z_A Phosphoribosyltransfera 99.9 5.9E-25 2E-29 167.6 13.8 139 29-182 33-175 (180)
12 2yzk_A OPRT, oprtase, orotate 99.9 6.5E-25 2.2E-29 167.1 13.2 137 29-181 26-166 (178)
13 2wns_A Orotate phosphoribosylt 99.9 2E-24 6.7E-29 167.9 14.9 138 29-181 30-171 (205)
14 3mjd_A Orotate phosphoribosylt 99.9 2.7E-24 9.4E-29 169.7 15.1 138 28-181 49-204 (232)
15 1lh0_A OMP synthase; loop clos 99.9 2.8E-24 9.5E-29 168.0 13.7 136 29-181 32-184 (213)
16 3qw4_B UMP synthase; N-termina 99.9 1.5E-23 5.3E-28 179.8 16.8 159 8-181 260-425 (453)
17 2aee_A OPRT, oprtase, orotate 99.9 1.4E-23 5E-28 163.6 14.7 139 29-181 36-178 (211)
18 3n2l_A OPRT, oprtase, orotate 99.9 1.5E-23 5E-28 165.9 14.4 136 29-181 57-209 (238)
19 2ps1_A Orotate phosphoribosylt 99.9 4.7E-23 1.6E-27 162.3 13.2 137 29-181 36-196 (226)
20 3hvu_A Hypoxanthine phosphorib 99.8 1.1E-19 3.6E-24 140.9 11.7 134 20-163 16-157 (204)
21 1vdm_A Purine phosphoribosyltr 99.8 2.7E-19 9.1E-24 132.4 13.1 121 36-163 3-124 (153)
22 1fsg_A HGPRTASE, hypoxanthine- 99.8 1.9E-19 6.6E-24 142.3 9.4 142 21-163 32-183 (233)
23 1z7g_A HGPRT, HGPRTASE, hypoxa 99.8 3.7E-19 1.3E-23 139.2 10.1 132 21-163 18-167 (217)
24 1hgx_A HGXPRTASE, hypoxanthine 99.8 3.6E-19 1.2E-23 135.7 9.6 125 30-163 6-136 (183)
25 2jbh_A Phosphoribosyltransfera 99.8 1.1E-18 3.9E-23 137.1 10.6 130 23-163 28-175 (225)
26 3lrt_A Ribose-phosphate pyroph 99.8 3.5E-18 1.2E-22 138.6 12.9 115 50-180 144-260 (286)
27 3ozf_A Hypoxanthine-guanine-xa 99.8 4.6E-19 1.6E-23 141.0 7.1 139 24-163 49-197 (250)
28 2geb_A Hypoxanthine-guanine ph 99.8 5.9E-18 2E-22 129.2 11.3 122 34-163 12-139 (185)
29 1pzm_A HGPRT, hypoxanthine-gua 99.7 6.1E-18 2.1E-22 131.8 10.8 123 31-163 20-159 (211)
30 3o7m_A Hypoxanthine phosphorib 99.7 1.2E-17 4.3E-22 127.6 11.8 121 33-163 7-135 (186)
31 1tc1_A Protein (hypoxanthine p 99.7 2.5E-17 8.6E-22 129.1 12.8 123 33-163 6-144 (220)
32 1a3c_A PYRR, pyrimidine operon 99.7 1.1E-17 3.8E-22 127.1 9.8 123 35-162 4-139 (181)
33 1u9y_A RPPK;, ribose-phosphate 99.7 1E-17 3.4E-22 136.0 9.4 120 48-181 143-264 (284)
34 1yfz_A Hypoxanthine-guanine ph 99.7 1.4E-17 4.7E-22 129.1 9.7 121 35-163 33-159 (205)
35 3s5j_B Ribose-phosphate pyroph 99.7 3.6E-17 1.2E-21 134.6 11.9 121 47-180 151-271 (326)
36 1nul_A XPRT, xanthine-guanine 99.7 3.7E-17 1.3E-21 121.1 10.5 111 36-162 4-116 (152)
37 2ywu_A Hypoxanthine-guanine ph 99.7 8.5E-17 2.9E-21 122.5 11.9 119 37-163 12-136 (181)
38 3ohp_A Hypoxanthine phosphorib 99.7 1.4E-16 4.9E-21 120.8 12.4 120 36-163 6-132 (177)
39 3dah_A Ribose-phosphate pyroph 99.7 5.6E-17 1.9E-21 133.2 10.6 109 59-180 166-274 (319)
40 1ufr_A TT1027, PYR mRNA-bindin 99.7 4.5E-17 1.5E-21 123.8 9.3 122 36-162 5-137 (181)
41 1wd5_A Hypothetical protein TT 99.7 1.6E-16 5.4E-21 123.4 10.7 110 59-171 23-167 (208)
42 1dku_A Protein (phosphoribosyl 99.7 3.1E-16 1.1E-20 129.0 12.7 109 59-180 167-275 (317)
43 2ji4_A Phosphoribosyl pyrophos 99.7 2.3E-16 7.8E-21 132.6 11.3 133 47-180 179-330 (379)
44 1w30_A PYRR bifunctional prote 99.7 2.4E-16 8.1E-21 121.9 10.4 123 35-162 13-153 (201)
45 2xbu_A Hypoxanthine-guanine ph 99.7 6.2E-16 2.1E-20 121.2 11.5 127 35-163 5-161 (221)
46 3acd_A Hypoxanthine-guanine ph 99.6 5.1E-15 1.7E-19 112.6 11.2 122 34-163 9-136 (181)
47 1ecf_A Glutamine phosphoribosy 99.6 1.1E-14 3.7E-19 126.6 12.6 114 44-159 275-396 (504)
48 1ao0_A Glutamine phosphoribosy 99.5 4.6E-14 1.6E-18 121.3 11.5 115 43-159 258-375 (459)
49 1dqn_A Guanine phosphoribosylt 99.5 4.5E-14 1.5E-18 111.1 6.2 112 35-163 32-154 (230)
50 1i5e_A Uracil phosphoribosyltr 99.2 1.1E-10 3.8E-15 90.5 8.9 98 60-171 71-171 (209)
51 1o5o_A Uracil phosphoribosyltr 99.1 1.4E-10 4.9E-15 90.5 8.5 96 62-171 85-183 (221)
52 2ehj_A Uracil phosphoribosyltr 99.0 1.8E-09 6.3E-14 83.5 9.6 97 61-171 71-170 (208)
53 2e55_A Uracil phosphoribosyltr 99.0 1.6E-09 5.4E-14 83.9 9.2 96 62-171 71-168 (208)
54 1v9s_A Uracil phosphoribosyltr 98.9 1.8E-09 6.2E-14 83.6 7.1 97 61-171 71-170 (208)
55 1bd3_D Uprtase, uracil phospho 98.9 7.4E-09 2.5E-13 81.8 9.0 96 62-171 105-205 (243)
56 3dmp_A Uracil phosphoribosyltr 98.7 5E-08 1.7E-12 75.9 7.8 96 62-171 80-178 (217)
57 1xtt_A Probable uracil phospho 98.5 3.3E-07 1.1E-11 71.2 7.8 102 61-171 73-180 (216)
58 3lkv_A Uncharacterized conserv 80.6 18 0.00062 28.1 11.2 142 7-155 18-175 (302)
59 3dah_A Ribose-phosphate pyroph 74.6 32 0.0011 27.6 10.4 74 68-156 14-92 (319)
60 1u9y_A RPPK;, ribose-phosphate 70.5 24 0.00082 27.7 8.5 73 69-156 8-84 (284)
61 3s5j_B Ribose-phosphate pyroph 54.7 82 0.0028 25.3 10.7 73 69-156 11-88 (326)
62 1r6j_A Syntenin 1; PDZ, membra 52.4 23 0.00077 22.3 4.3 35 118-152 40-74 (82)
63 3to5_A CHEY homolog; alpha(5)b 52.2 13 0.00046 25.5 3.5 30 121-153 11-40 (134)
64 4hwg_A UDP-N-acetylglucosamine 50.8 28 0.00097 28.3 5.7 48 41-88 76-123 (385)
65 3f6p_A Transcriptional regulat 49.9 35 0.0012 21.8 5.2 27 122-151 2-28 (120)
66 3gl9_A Response regulator; bet 47.7 40 0.0014 21.6 5.2 27 123-152 3-29 (122)
67 3eod_A Protein HNR; response r 46.4 44 0.0015 21.4 5.3 29 121-152 6-34 (130)
68 2ji4_A Phosphoribosyl pyrophos 46.2 1.1E+02 0.0037 25.0 8.6 73 69-156 37-117 (379)
69 3lrt_A Ribose-phosphate pyroph 44.5 63 0.0021 25.4 6.6 71 70-156 9-83 (286)
70 3foj_A Uncharacterized protein 43.5 60 0.002 20.5 5.5 30 118-150 52-81 (100)
71 3rsc_A CALG2; TDP, enediyne, s 43.3 57 0.002 25.9 6.5 41 48-89 107-147 (415)
72 3h5i_A Response regulator/sens 42.4 48 0.0016 21.7 5.1 28 121-151 4-31 (140)
73 3ia7_A CALG4; glycosysltransfe 42.1 66 0.0023 25.2 6.6 41 48-89 91-131 (402)
74 1sxj_A Activator 1 95 kDa subu 42.0 1.2E+02 0.0041 25.5 8.5 56 34-89 38-109 (516)
75 3hix_A ALR3790 protein; rhodan 41.9 34 0.0011 22.1 4.1 31 119-152 49-79 (106)
76 1wi4_A Synip, syntaxin binding 41.8 38 0.0013 22.1 4.3 38 119-156 60-100 (109)
77 3iwh_A Rhodanese-like domain p 41.1 55 0.0019 21.2 5.0 52 118-178 52-103 (103)
78 2iya_A OLEI, oleandomycin glyc 41.1 68 0.0023 25.7 6.6 39 49-89 99-137 (424)
79 3lte_A Response regulator; str 39.9 57 0.002 20.9 5.1 28 121-151 5-32 (132)
80 3ilm_A ALR3790 protein; rhodan 39.7 38 0.0013 23.3 4.2 33 118-153 52-84 (141)
81 1i16_A Interleukin 16, LCF; cy 39.1 36 0.0012 22.9 4.0 38 118-155 75-112 (130)
82 3gge_A PDZ domain-containing p 38.1 59 0.002 21.2 4.7 43 117-159 45-87 (95)
83 1dku_A Protein (phosphoribosyl 38.1 1.5E+02 0.0051 23.5 10.9 77 67-158 15-96 (317)
84 2jtq_A Phage shock protein E; 37.9 59 0.002 19.7 4.6 31 120-153 39-69 (85)
85 3ghf_A Septum site-determining 37.8 30 0.001 23.5 3.3 78 6-89 26-103 (120)
86 2iyf_A OLED, oleandomycin glyc 37.7 87 0.003 25.0 6.7 40 48-89 93-132 (430)
87 3gk5_A Uncharacterized rhodane 36.6 59 0.002 20.9 4.6 30 118-150 51-80 (108)
88 2d92_A INAD-like protein; PDZ 35.4 88 0.003 20.0 5.5 35 119-153 63-97 (108)
89 3o46_A Maguk P55 subfamily mem 34.8 66 0.0023 19.9 4.5 32 119-150 47-78 (93)
90 2j48_A Two-component sensor ki 34.6 79 0.0027 19.3 5.2 12 123-134 2-13 (119)
91 3otg_A CALG1; calicheamicin, T 34.2 60 0.002 25.7 5.2 38 49-88 120-157 (412)
92 3eme_A Rhodanese-like domain p 34.0 83 0.0028 19.8 5.0 30 118-150 52-81 (103)
93 2p6p_A Glycosyl transferase; X 33.6 66 0.0023 25.3 5.3 37 51-89 99-135 (384)
94 3hzh_A Chemotaxis response reg 33.2 82 0.0028 21.1 5.2 30 121-153 35-64 (157)
95 1gmx_A GLPE protein; transfera 33.1 47 0.0016 21.3 3.7 31 119-152 55-85 (108)
96 3grc_A Sensor protein, kinase; 33.1 93 0.0032 20.1 5.3 28 121-151 5-32 (140)
97 2r44_A Uncharacterized protein 32.7 1.7E+02 0.0058 22.5 9.4 104 38-147 30-135 (331)
98 3gt7_A Sensor protein; structu 32.6 80 0.0027 21.1 5.0 28 121-151 6-33 (154)
99 4fzr_A SSFS6; structural genom 32.5 69 0.0024 25.4 5.3 37 50-88 114-150 (398)
100 3hdv_A Response regulator; PSI 31.5 89 0.003 20.0 5.0 29 121-152 6-34 (136)
101 3e17_A Tight junction protein 31.0 88 0.003 19.2 4.6 33 119-151 40-72 (88)
102 2yjn_A ERYCIII, glycosyltransf 30.9 54 0.0018 26.6 4.4 30 57-88 142-171 (441)
103 3dzc_A UDP-N-acetylglucosamine 30.2 77 0.0026 25.6 5.2 42 47-88 99-141 (396)
104 1efv_B Electron transfer flavo 30.2 58 0.002 25.1 4.2 40 48-87 105-148 (255)
105 1o97_C Electron transferring f 30.1 58 0.002 25.2 4.2 41 48-88 101-145 (264)
106 1o63_A ATP phosphoribosyltrans 30.1 15 0.00051 28.0 0.8 13 128-140 146-158 (219)
107 3i42_A Response regulator rece 30.1 75 0.0026 20.1 4.4 26 122-150 3-28 (127)
108 3vot_A L-amino acid ligase, BL 29.9 82 0.0028 25.5 5.4 45 38-85 57-101 (425)
109 3m6m_D Sensory/regulatory prot 29.8 78 0.0027 20.8 4.5 28 121-151 13-40 (143)
110 1kwa_A Hcask/LIN-2 protein; PD 29.7 93 0.0032 19.1 4.6 33 118-150 43-75 (88)
111 3h1g_A Chemotaxis protein CHEY 29.7 73 0.0025 20.4 4.2 27 122-151 5-31 (129)
112 1ve4_A ATP phosphoribosyltrans 29.3 16 0.00054 27.6 0.8 20 128-154 151-170 (206)
113 3eul_A Possible nitrate/nitrit 28.9 77 0.0026 20.9 4.4 27 121-150 14-40 (152)
114 3mm4_A Histidine kinase homolo 28.7 63 0.0022 23.2 4.1 27 121-150 60-86 (206)
115 1nu0_A Hypothetical protein YQ 28.4 82 0.0028 21.8 4.4 33 59-91 53-97 (138)
116 2iwo_A Multiple PDZ domain pro 28.3 1.1E+02 0.0039 20.1 5.0 34 118-151 71-104 (120)
117 3ot5_A UDP-N-acetylglucosamine 28.2 80 0.0027 25.6 5.0 42 47-88 102-144 (403)
118 3tum_A Shikimate dehydrogenase 27.7 1E+02 0.0035 23.8 5.3 36 121-163 124-159 (269)
119 1efp_B ETF, protein (electron 27.5 56 0.0019 25.1 3.7 40 49-88 103-146 (252)
120 1z7m_E ATP phosphoribosyltrans 27.4 14 0.00049 27.8 0.3 20 128-154 153-172 (208)
121 2pln_A HP1043, response regula 27.4 79 0.0027 20.4 4.1 28 121-151 17-44 (137)
122 3r68_A Na(+)/H(+) exchange reg 26.8 90 0.0031 19.2 4.1 35 118-152 46-80 (95)
123 1dcf_A ETR1 protein; beta-alph 26.7 84 0.0029 20.2 4.2 28 121-151 6-33 (136)
124 3kto_A Response regulator rece 26.6 89 0.003 20.2 4.3 29 121-152 5-33 (136)
125 1g9o_A NHE-RF; PDZ domain, com 25.7 1.2E+02 0.004 18.5 4.6 35 118-152 44-78 (91)
126 3snk_A Response regulator CHEY 25.2 1E+02 0.0034 19.8 4.3 26 121-149 13-38 (135)
127 3s2u_A UDP-N-acetylglucosamine 25.2 1.3E+02 0.0045 23.8 5.7 35 54-88 87-121 (365)
128 3kyj_B CHEY6 protein, putative 25.0 85 0.0029 20.5 4.0 25 121-148 12-36 (145)
129 1tmy_A CHEY protein, TMY; chem 24.8 97 0.0033 19.2 4.1 27 122-151 2-28 (120)
130 1iv0_A Hypothetical protein; r 24.4 1.4E+02 0.0048 19.3 4.7 40 49-89 41-92 (98)
131 1iir_A Glycosyltransferase GTF 24.2 1.9E+02 0.0066 22.9 6.6 32 57-89 91-124 (415)
132 1mb3_A Cell division response 24.0 1E+02 0.0034 19.3 4.1 16 123-138 2-17 (124)
133 1v6b_A Harmonin isoform A1; st 23.9 1.6E+02 0.0053 19.2 5.2 31 118-148 61-91 (118)
134 3fet_A Electron transfer flavo 23.8 1.1E+02 0.0039 21.7 4.6 42 45-88 57-99 (166)
135 3t4e_A Quinate/shikimate dehyd 23.7 1.2E+02 0.0042 23.9 5.2 35 121-162 147-181 (312)
136 2a9o_A Response regulator; ess 23.4 1.4E+02 0.0046 18.4 5.1 25 124-151 3-27 (120)
137 3t6k_A Response regulator rece 23.2 1.1E+02 0.0037 19.8 4.2 27 122-151 4-30 (136)
138 5nul_A Flavodoxin; electron tr 23.2 99 0.0034 20.5 4.0 35 121-155 78-113 (138)
139 3g5j_A Putative ATP/GTP bindin 23.1 1.1E+02 0.0039 19.9 4.3 29 120-150 86-115 (134)
140 2k0z_A Uncharacterized protein 23.1 1.2E+02 0.0042 19.3 4.4 31 119-152 53-83 (110)
141 3jte_A Response regulator rece 23.0 1.5E+02 0.0051 19.0 4.9 25 123-150 4-28 (143)
142 1wg6_A Hypothetical protein (r 23.0 95 0.0032 20.7 3.9 30 119-148 74-103 (127)
143 1qv9_A F420-dependent methylen 22.9 1.9E+02 0.0066 22.4 5.8 56 34-89 39-98 (283)
144 2vd3_A ATP phosphoribosyltrans 22.8 25 0.00086 27.9 0.9 13 128-140 158-170 (289)
145 3flh_A Uncharacterized protein 22.6 1.3E+02 0.0043 19.8 4.4 31 118-151 67-99 (124)
146 3tsa_A SPNG, NDP-rhamnosyltran 22.5 1.3E+02 0.0046 23.4 5.3 37 50-88 105-141 (391)
147 2lpm_A Two-component response 22.4 92 0.0031 20.9 3.6 28 122-152 8-35 (123)
148 4dad_A Putative pilus assembly 22.3 79 0.0027 20.7 3.3 29 121-152 19-48 (146)
149 1h3d_A ATP-phosphoribosyltrans 22.2 25 0.00086 28.0 0.8 13 128-140 167-179 (299)
150 3dfz_A SIRC, precorrin-2 dehyd 21.5 1.2E+02 0.0041 22.8 4.5 29 121-153 30-58 (223)
151 1nh8_A ATP phosphoribosyltrans 21.4 27 0.00092 28.0 0.8 19 128-153 172-190 (304)
152 1wv9_A Rhodanese homolog TT165 21.3 1.5E+02 0.0052 18.2 4.8 29 119-151 51-79 (94)
153 1q44_A RARO47, steroid sulfotr 21.3 2.7E+02 0.0094 21.7 6.8 78 3-81 9-88 (326)
154 1jbe_A Chemotaxis protein CHEY 21.3 1.6E+02 0.0053 18.4 4.6 26 122-150 4-29 (128)
155 2dc2_A GOPC, golgi associated 21.2 1.6E+02 0.0054 18.6 4.5 34 118-151 53-86 (103)
156 1wfg_A Regulating synaptic mem 21.1 1.6E+02 0.0054 19.7 4.7 38 119-156 84-122 (131)
157 3ih5_A Electron transfer flavo 21.1 65 0.0022 24.1 2.9 39 49-87 81-120 (217)
158 3td9_A Branched chain amino ac 21.0 2.5E+02 0.0085 21.5 6.5 112 38-156 63-185 (366)
159 3uhj_A Probable glycerol dehyd 20.8 96 0.0033 25.3 4.1 43 49-91 96-139 (387)
160 1srr_A SPO0F, sporulation resp 20.7 1.6E+02 0.0056 18.3 5.0 12 123-134 4-15 (124)
161 1ufx_A KIAA1526 protein; PDZ d 20.7 70 0.0024 20.5 2.7 30 119-148 51-80 (103)
162 1tq1_A AT5G66040, senescence-a 20.6 80 0.0027 21.0 3.0 31 119-152 79-109 (129)
163 2fsx_A RV0390, COG0607: rhodan 20.5 84 0.0029 21.4 3.2 29 120-151 78-106 (148)
164 2hcu_A 3-isopropylmalate dehyd 20.5 76 0.0026 23.9 3.1 35 121-155 84-118 (213)
165 4ds3_A Phosphoribosylglycinami 20.4 1.1E+02 0.0039 22.7 4.1 53 124-178 9-63 (209)
166 3b76_A E3 ubiquitin-protein li 20.3 1.5E+02 0.0052 19.4 4.4 33 119-151 72-104 (118)
167 1f0k_A MURG, UDP-N-acetylgluco 20.2 1.9E+02 0.0064 22.2 5.6 39 50-88 87-125 (364)
168 3oti_A CALG3; calicheamicin, T 20.2 83 0.0028 24.9 3.5 37 50-88 121-157 (398)
169 2b4a_A BH3024; flavodoxin-like 20.2 1.4E+02 0.0047 19.2 4.2 28 121-151 14-41 (138)
170 3egg_C Spinophilin; PP1, serin 20.0 1.7E+02 0.0058 20.7 4.9 33 119-151 130-162 (170)
No 1
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*
Probab=100.00 E-value=8.5e-34 Score=216.40 Aligned_cols=176 Identities=42% Similarity=0.801 Sum_probs=150.7
Q ss_pred chHHHHHHhhccccCCCCCCCCceEEecccccCCHHHHHHHHHHHHHHhcCC---CCcEEEEeCCCchhhHHHHHHHhCC
Q 030119 7 KDARINGIKDQIRVVPNFPKPGIMFQDITTLLLKPKEFKDTIDMFVERYKGK---NISVVAGIEARGFIFGPPIALAIGA 83 (182)
Q Consensus 7 ~~~~~~~~~~~~r~~~~~~~~~~~~~d~~~l~~~~~~~~~l~~~la~~~~~~---~~d~Iv~v~~~G~~~a~~la~~l~~ 83 (182)
+++.|+.|++.+|..|+||.+|+.|.|...++.+|+.++.+++.|++.+... ++|+|+|++.||+++|..+|+.+++
T Consensus 2 ~~~~~~~l~~~i~~~~~~p~~g~~~~d~~~~l~~~~~~~~la~~l~~~~~~~~~~~~d~vv~v~~~G~~~a~~la~~l~~ 81 (180)
T 1zn8_A 2 ADSELQLVEQRIRSFPDFPTPGVVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDYIAGLDSRGFLFGPSLAQELGL 81 (180)
T ss_dssp -CHHHHHHHTTCEEEETCSSTTCEEEECHHHHHSHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTTHHHHHHHHHHHHTC
T ss_pred ChHHHHHHHHHHhcCCCCCcCCeEEEecHHHhcCHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHhCC
Confidence 3577999999999999999999999999999999999999999999888543 3899999999999999999999999
Q ss_pred CeeeeecCCCCCCcccchheeeccccceEEEeecccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeecC
Q 030119 84 KFVPLRKPKKLPGKVISEEYILEYGRDCLEMHVGAVESAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELPD 163 (182)
Q Consensus 84 p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~~ 163 (182)
|+.+.++..+.++...+..++..++.+.+++..+...+|++||||||++|||+|+.++++.|+++|++++.+++++++..
T Consensus 82 p~~~~r~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~ 161 (180)
T 1zn8_A 82 GCVLIRKRGKLPGPTLWASYSLEYGKAELEIQKDALEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTS 161 (180)
T ss_dssp EEEEEEETTCCCSSEEEEEEEETTEEEEEEEETTSSCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEEEGG
T ss_pred CEEEEEecCCCCcccccHHHHHhcCccEEEEeccccCCCCEEEEEcCCcccHHHHHHHHHHHHHcCCEEEEEEEEEEccC
Confidence 99888776554444443344444444556665444458999999999999999999999999999999999999999988
Q ss_pred chhhccccCCCeEEeeeeC
Q 030119 164 LKGRERLNGKPLYVLVESH 182 (182)
Q Consensus 164 ~~~~~~l~~~~~~sl~~~~ 182 (182)
.++.+++.++++++|++++
T Consensus 162 ~~~~~~l~~~~~~sl~~~~ 180 (180)
T 1zn8_A 162 LKGREKLAPVPFFSLLQYE 180 (180)
T ss_dssp GCHHHHHTTSCEEEEEEEC
T ss_pred cchhhhhcCCceEEEEecC
Confidence 7788999999999999985
No 2
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}
Probab=100.00 E-value=2.2e-33 Score=216.04 Aligned_cols=176 Identities=49% Similarity=0.882 Sum_probs=152.0
Q ss_pred chHHHHHHhhccccCCCCCCCCceEEecccccCCHHHHHHHHHHHHHHhcCCCCcEEEEeCCCchhhHHHHHHHhCCCee
Q 030119 7 KDARINGIKDQIRVVPNFPKPGIMFQDITTLLLKPKEFKDTIDMFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKFV 86 (182)
Q Consensus 7 ~~~~~~~~~~~~r~~~~~~~~~~~~~d~~~l~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~~p~~ 86 (182)
..+.++.|++.+|..|+||.+|+.|.|+..++.+++.++.+++.|+..+.+.++|+|+|++.||+++|..+|+.+++|++
T Consensus 11 ~~~~~~~l~~~i~~~p~~~~~g~~~~d~~~~~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~rG~~~a~~la~~l~~p~~ 90 (190)
T 2dy0_A 11 TAQQLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFV 90 (190)
T ss_dssp CHHHHHHHHHHSEEETTCSSTTCCEEETHHHHHCHHHHHHHHHHHHHHHTTTTCCEEEEETTHHHHHHHHHHHHHTCEEE
T ss_pred cHHHHHHHHHHHhhCCCCCCCCeEEEeChhhhcCHHHHHHHHHHHHHHhccCCCCEEEEECcccHHHHHHHHHHHCCCEE
Confidence 34468889999999999999999999999999999999999999999997667899999999999999999999999998
Q ss_pred eeecCCCCCCcccchheeeccccceEEEeecccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeecCchh
Q 030119 87 PLRKPKKLPGKVISEEYILEYGRDCLEMHVGAVESAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELPDLKG 166 (182)
Q Consensus 87 ~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~~~~~ 166 (182)
++++..+.++...+..++.+++.+.+++..+.+.+|++||||||++|||+|+.++++.|+++|++++.++|++++.+.++
T Consensus 91 ~~rk~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~gk~VLlVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~~~ 170 (190)
T 2dy0_A 91 PVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGG 170 (190)
T ss_dssp EEBSTTCCCSCEEEEEEEETTEEEEEEEEGGGCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEEGGGCH
T ss_pred EEEecCCCCcccccceehhhcCceEEEEeccccCCcCEEEEEEccccchHHHHHHHHHHHHcCCEEEEEEEEEEccCcch
Confidence 88876665544444444444544556655444458999999999999999999999999999999999999999987778
Q ss_pred hcccc--CCCeEEeeeeC
Q 030119 167 RERLN--GKPLYVLVESH 182 (182)
Q Consensus 167 ~~~l~--~~~~~sl~~~~ 182 (182)
++++. ++|++||++++
T Consensus 171 ~~~l~~~g~~v~sl~~~~ 188 (190)
T 2dy0_A 171 EQRLEKQGITSYSLVPFP 188 (190)
T ss_dssp HHHHHTTTCEEEEEEEEC
T ss_pred HHHHhhCCCcEEEEEEec
Confidence 88886 79999999874
No 3
>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A
Probab=100.00 E-value=1.9e-33 Score=215.84 Aligned_cols=174 Identities=39% Similarity=0.718 Sum_probs=148.5
Q ss_pred hHHHHHHhhccccCCCCCCCCceEEecccccCCHHHHHHHHHHHHHHhcC----CCCcEEEEeCCCchhhHHHHHHHhCC
Q 030119 8 DARINGIKDQIRVVPNFPKPGIMFQDITTLLLKPKEFKDTIDMFVERYKG----KNISVVAGIEARGFIFGPPIALAIGA 83 (182)
Q Consensus 8 ~~~~~~~~~~~r~~~~~~~~~~~~~d~~~l~~~~~~~~~l~~~la~~~~~----~~~d~Iv~v~~~G~~~a~~la~~l~~ 83 (182)
++..++|++.+|..|+||++|+.|.|+..++.+++.++.+++.|+.++.+ .++|+|+|++.||+++|..+|+.+++
T Consensus 4 ~~~~~~l~~~~~~~~~~p~~g~~~~d~~~~l~~~~~~~~~~~~La~~i~~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~~ 83 (187)
T 1g2q_A 4 ASYAQELKLALHQYPNFPSEGILFEDFLPIFRNPGLFQKLIDAFKLHLEEAFPEVKIDYIVGLESRGFLFGPTLALALGV 83 (187)
T ss_dssp HHHHHHHHHHCEEETTCSSTTCCEEECHHHHHSHHHHHHHHHHHHHHHHHHCTTSCCCEEEEETTTHHHHHHHHHHHHTC
T ss_pred hHHHHHHHHhcccCCCCCCCCEEEEehHhhhcCHHHHHHHHHHHHHHHhhhcccCCCCEEEEEccCcHHHHHHHHHHHCC
Confidence 46788999999999999999999999999999999999999999998865 46899999999999999999999999
Q ss_pred CeeeeecCCCCCCcccchheeeccccceEEEeecccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeecC
Q 030119 84 KFVPLRKPKKLPGKVISEEYILEYGRDCLEMHVGAVESAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELPD 163 (182)
Q Consensus 84 p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~~ 163 (182)
|+.++++..+.++...+.+++.+++.+.+++..+...+|++||||||++|||+|+.++++.|+++|++++.+++++++.+
T Consensus 84 p~~~~rk~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~ 163 (187)
T 1g2q_A 84 GFVPVRKAGKLPGECFKATYEKEYGSDLFEIQKNAIPAGSNVIIVDDIIATGGSAAAAGELVEQLEANLLEYNFVMELDF 163 (187)
T ss_dssp EEEEEEETTCSCSSEEEEEEECSSCEEEEEEETTSSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECCC
T ss_pred CEEEEEEeCCCCcceecHHHHHHhCCCcEEEecccCCCcCEEEEECCCcccHHHHHHHHHHHHHcCCeEEEEEEEEEccC
Confidence 99988876554444444444444455566665444458999999999999999999999999999999999999999987
Q ss_pred chhhccccCCCeEEeeeeC
Q 030119 164 LKGRERLNGKPLYVLVESH 182 (182)
Q Consensus 164 ~~~~~~l~~~~~~sl~~~~ 182 (182)
.++++++ ++|++||++++
T Consensus 164 ~~g~~~l-~~~~~sl~~~~ 181 (187)
T 1g2q_A 164 LKGRSKL-NAPVFTLLNAQ 181 (187)
T ss_dssp SSCCCCC-SSCEEECC---
T ss_pred cCchhhc-CccEEEEEEec
Confidence 7788888 99999999874
No 4
>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A*
Probab=100.00 E-value=2.7e-33 Score=222.33 Aligned_cols=177 Identities=32% Similarity=0.571 Sum_probs=154.9
Q ss_pred CchHHHHHHhhccccC-CCCCCCCc-eEEecccccCCHHHHHHHHHHHHHHhcCC--CCcEEEEeCCCchhhHHHHHHHh
Q 030119 6 DKDARINGIKDQIRVV-PNFPKPGI-MFQDITTLLLKPKEFKDTIDMFVERYKGK--NISVVAGIEARGFIFGPPIALAI 81 (182)
Q Consensus 6 ~~~~~~~~~~~~~r~~-~~~~~~~~-~~~d~~~l~~~~~~~~~l~~~la~~~~~~--~~d~Iv~v~~~G~~~a~~la~~l 81 (182)
.+++..++|++.+|+. |+||++|+ .|.|+..++.+|+.++.+++.|++.+.+. ++|+|+|++.||+++|..+|+.+
T Consensus 14 ~~~~~~~~l~~~i~~~~~dfp~~gip~~~D~~~ll~~~~~~~~~~~~la~~i~~~~~~~d~Ivgv~~gG~~~a~~lA~~L 93 (236)
T 1qb7_A 14 DSHALSQLLKKSYRWYSPVFSPRNVPRFADVSSITESPETLKAIRDFLVQRYRAMSPAPTHILGFDARGFLFGPMIAVEL 93 (236)
T ss_dssp TTSHHHHHHHHHCCEECGGGSSSCSSSEECTHHHHTCHHHHHHHHHHHHHHHHHCSSCCSEEEEETTGGGGTHHHHHHHH
T ss_pred cChHHHHHHHHHhcccCCCCCCCCCEeEEEhHhhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEECcCcHHHHHHHHHHh
Confidence 5678889999999999 99999999 99999999999999999999999998765 78999999999999999999999
Q ss_pred CCCeeeeecCCCCCCccc-chheeecc---ccceEEEeecccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEE
Q 030119 82 GAKFVPLRKPKKLPGKVI-SEEYILEY---GRDCLEMHVGAVESAERALVVDDLIATGGTLCAAINLLERVGAEVVECAC 157 (182)
Q Consensus 82 ~~p~~~~~k~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~v 157 (182)
++|+++.+|..+.++... +.+|..++ +.+.+++..+.+.+|++||||||++|||+|+.+++++|+++|++++++++
T Consensus 94 ~~p~~~~rk~~k~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~ 173 (236)
T 1qb7_A 94 EIPFVLMRKADKNAGLLIRSEPYEKEYKEAAPEVMTIRYGSIGKGSRVVLIDDVLATGGTALSGLQLVEASDAVVVEMVS 173 (236)
T ss_dssp TCCEEEEBCGGGCCSSEEECCCCCCCTTSCCCCCCEEETTSSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCEEEEEEecCCCCcceeceeccchhhhcCcceEEEecCCCCCcCEEEEEecccccHHHHHHHHHHHHHcCCeEEEEEE
Confidence 999999887766555544 44454444 44456665555568999999999999999999999999999999999999
Q ss_pred EEeecCchhhcccc--------CCCeEEeeeeC
Q 030119 158 VIELPDLKGRERLN--------GKPLYVLVESH 182 (182)
Q Consensus 158 l~~~~~~~~~~~l~--------~~~~~sl~~~~ 182 (182)
++++.+.++++++. +++++||++++
T Consensus 174 l~~~~~~~g~~~l~~~~~~~~~g~~v~sl~~~~ 206 (236)
T 1qb7_A 174 ILSIPFLKAAEKIHSTANSRYKDIKFISLLSDD 206 (236)
T ss_dssp EEECGGGCHHHHHHHHHHHTTTTCCEEEEEEGG
T ss_pred EEEcccccHHHHHhhhcccccCCCcEEEEEEcc
Confidence 99998877888886 79999999864
No 5
>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, cataly transferase; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A*
Probab=99.98 E-value=1.3e-31 Score=205.42 Aligned_cols=173 Identities=34% Similarity=0.577 Sum_probs=146.2
Q ss_pred HHHHHHhhccccCCCCCCCCceEEecccccCCHHHHHHHHHHHHHHhcCCCCcEEEEeCCCchhhHHHHHHHhCCCeeee
Q 030119 9 ARINGIKDQIRVVPNFPKPGIMFQDITTLLLKPKEFKDTIDMFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKFVPL 88 (182)
Q Consensus 9 ~~~~~~~~~~r~~~~~~~~~~~~~d~~~l~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~~p~~~~ 88 (182)
..++.|++.+|.+|+||.+|+.|.|...++.+++.++.+++.|+..+...++|+|+|+|.||+++|..+|+.+++|+...
T Consensus 3 ~~~~~l~~~~~~~p~~p~~g~~~~d~~~~l~~~~~~~~l~~~la~~~~~~~~d~Iv~vp~rG~~~A~~la~~l~~p~~~~ 82 (186)
T 1l1q_A 3 MSVADAHALIKTIPDFPTKGIAFKDLSDILSTPAALDAVRKEVTAHYKDVPITKVVGIESRGFILGGIVANSLGVGFVAL 82 (186)
T ss_dssp CCHHHHHHTCEEETTCSSTTCCEEECHHHHTCHHHHHHHHHHHHHHTTTSCCCEEEEESGGGHHHHHHHHHHHTCEEEEE
T ss_pred hhHHHHHhhhccCCCCCCCCeEEEEhHHHhCCHHHHHHHHHHHHHHhhccCCCEEEEcCcccHHHHHHHHHHhCCCEEEE
Confidence 34678999999999999999999999999999999999999999988766789999999999999999999999999888
Q ss_pred ecCCCCCCcccchheeeccccc-eEEEeecccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCe--EEEEEEEEeecCch
Q 030119 89 RKPKKLPGKVISEEYILEYGRD-CLEMHVGAVESAERALVVDDLIATGGTLCAAINLLERVGAE--VVECACVIELPDLK 165 (182)
Q Consensus 89 ~k~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~--~v~~~vl~~~~~~~ 165 (182)
++..+.++...+.+++..++.. .+++..+.+.+|++||||||++|||+|+.++++.|+++|++ ++.++|++++.+.+
T Consensus 83 rk~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~gk~VLLVDDVitTG~Tl~aa~~~L~~~Ga~~~~V~~~~l~~k~~~~ 162 (186)
T 1l1q_A 83 RKAGKLPGDVCKCTFDMEYQKGVTIEVQKRQLGPHDVVLLHDDVLATGGTLLAAIELCETAGVKPENIYINVLYEIEALK 162 (186)
T ss_dssp EETTSSCSSEEEEEEEETTEEEEEEEEEGGGCCTTCCEEEEEEEESSSHHHHHHHHHHHHTTCCGGGEEEEEEEECGGGC
T ss_pred EecCCCCCceechhhhhhcCcceEEEEecccCCCcCEEEEEecccccHHHHHHHHHHHHHcCCCcceEEEEEEEEccCcc
Confidence 8776554443333333333322 45554444458999999999999999999999999999999 99999999998777
Q ss_pred hhccccCCCeEEeeee
Q 030119 166 GRERLNGKPLYVLVES 181 (182)
Q Consensus 166 ~~~~l~~~~~~sl~~~ 181 (182)
++++++++++.+++-+
T Consensus 163 g~~~l~~~~~~~~~~~ 178 (186)
T 1l1q_A 163 GREKVGQKCTRLFSVI 178 (186)
T ss_dssp HHHHHTTTCCCEEEEE
T ss_pred HHHHHhhcCcceehhh
Confidence 8999998888887653
No 6
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=99.94 E-value=5.4e-27 Score=185.45 Aligned_cols=139 Identities=24% Similarity=0.351 Sum_probs=114.9
Q ss_pred ceEEecccccCCHHHHHHHHHHHHHHhcCC--CCcEEEEeCCCchhhHHHHHHHhCCCeeeeecCCCCCCcccchheeec
Q 030119 29 IMFQDITTLLLKPKEFKDTIDMFVERYKGK--NISVVAGIEARGFIFGPPIALAIGAKFVPLRKPKKLPGKVISEEYILE 106 (182)
Q Consensus 29 ~~~~d~~~l~~~~~~~~~l~~~la~~~~~~--~~d~Iv~v~~~G~~~a~~la~~l~~p~~~~~k~~~~~~~~~~~~~~~~ 106 (182)
..|+|.+.++.+|+.++.+++.|++.+.+. ++|+|+|++.+|+++|..+|+.|++|++++||..+.++..
T Consensus 56 p~Y~d~~~~~~~p~~~~~l~~~la~~i~~~~~~~D~Ivg~~~gGi~~a~~lA~~L~~p~~~vrk~~k~~G~~-------- 127 (234)
T 3m3h_A 56 PIYCDNRLTLSYPKVRQTIAAGLEELIKEHFPTVEVIAGTATAGIAHAAWVSDRMDLPMCYVRSKAKGHGKG-------- 127 (234)
T ss_dssp SEEECGGGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEC---CHHHHHHHHHHHTCCEEEEC-----------------
T ss_pred CEEEeCHHhccCHHHHHHHHHHHHHHHHHhCCCCCEEEEeccchHHHHHHHHHHcCCCEEEEEEeeccCCcc--------
Confidence 589999999999999999999999998754 7999999999999999999999999999998765543321
Q ss_pred cccceEEEeecccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeecCchhhcccc--CCCeEEeeee
Q 030119 107 YGRDCLEMHVGAVESAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELPDLKGRERLN--GKPLYVLVES 181 (182)
Q Consensus 107 ~~~~~~~~~~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~~~~~~~~l~--~~~~~sl~~~ 181 (182)
..++ +.+.+|++||||||++|||+|+.++++.|+++|++++++++++++...++.+++. +++++||+++
T Consensus 128 ---~~i~---g~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~~~~~~~~~e~l~~~gi~v~sL~~~ 198 (234)
T 3m3h_A 128 ---NQIE---GKAEKGQKVVVVEDLISTGGSAITCVEALREAGCEVLGIVSIFTYELEAGKEKLEAANVASYSLSDY 198 (234)
T ss_dssp ---CCEE---SCCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHTTCCEEESSCH
T ss_pred ---eEEe---cccCCCCEEEEEecccchhHHHHHHHHHHHHCCCEEEEEEEEEECcCchHHHHHHhcCCCEEEEeeH
Confidence 1111 4455999999999999999999999999999999999999999998777888884 8999999986
No 7
>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*
Probab=99.94 E-value=1.1e-25 Score=173.60 Aligned_cols=170 Identities=21% Similarity=0.316 Sum_probs=129.4
Q ss_pred HHHHHHhhccccCCCCCCCCceEEe-cccccCCHHHHHHHHHHHHHHhcCCCCcEEEEeCCCchhhHHHHHHHhCCCeee
Q 030119 9 ARINGIKDQIRVVPNFPKPGIMFQD-ITTLLLKPKEFKDTIDMFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKFVP 87 (182)
Q Consensus 9 ~~~~~~~~~~r~~~~~~~~~~~~~d-~~~l~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~~p~~~ 87 (182)
.++++|.+.-++.++ +++|.| +.+...+|+.++.++..|+..+...++|+|+|+|.||+++|..+|+.+++|+.+
T Consensus 6 ~l~~~l~~~~~~~~g----~~l~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~rG~~~a~~la~~l~~p~~~ 81 (197)
T 1y0b_A 6 ALKRKIEEEGVVLSD----QVLKVDSFLNHQIDPLLMQRIGDEFASRFAKDGITKIVTIESSGIAPAVMTGLKLGVPVVF 81 (197)
T ss_dssp HHHHHHHHHCEEETT----TEEECTTTTSSEECHHHHHHHHHHHHHHTTTTTCCEEEEETTTTHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHhhCCEecCC----CEEEehhhhcccCCHHHHHHHHHHHHHHhhcCCCCEEEEEcccCHHHHHHHHHHhCCCEEE
Confidence 355566666566665 444433 333457999999999999999976678999999999999999999999999988
Q ss_pred eecCCCCC--Ccccch-heeeccc-cceEEEeecccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeecC
Q 030119 88 LRKPKKLP--GKVISE-EYILEYG-RDCLEMHVGAVESAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELPD 163 (182)
Q Consensus 88 ~~k~~~~~--~~~~~~-~~~~~~~-~~~~~~~~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~~ 163 (182)
.++..+.+ +..... .+....+ ...+++..+.+.+|++||||||++|||+|+.++++.|+++|++.+.+++++++.+
T Consensus 82 ~rk~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~ 161 (197)
T 1y0b_A 82 ARKHKSLTLTDNLLTASVYSFTKQTESQIAVSGTHLSDQDHVLIIDDFLANGQAAHGLVSIVKQAGASIAGIGIVIEKSF 161 (197)
T ss_dssp EBSSCCSSCCSSEEEEEEEETTTTEEEEEEEEGGGCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEETT
T ss_pred EEecCCCCCCCceEEEeeeccccCceEEEEEeccccCCcCEEEEEEcccccCHHHHHHHHHHHHCCCEEEEEEEEEEecc
Confidence 87765433 222111 1111111 1234444334458999999999999999999999999999999999999999987
Q ss_pred chhhcccc--CCCeEEeeeeC
Q 030119 164 LKGRERLN--GKPLYVLVESH 182 (182)
Q Consensus 164 ~~~~~~l~--~~~~~sl~~~~ 182 (182)
.++.++++ ++++++|++++
T Consensus 162 ~~~~~~l~~~~~~~~sl~~~~ 182 (197)
T 1y0b_A 162 QPGRDELVKLGYRVESLARIQ 182 (197)
T ss_dssp STHHHHHHHTTCCEEEEEEEE
T ss_pred cchhhhHHhcCCcEEEEEEEE
Confidence 77888886 78999999863
No 8
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=99.94 E-value=2.5e-26 Score=182.45 Aligned_cols=139 Identities=24% Similarity=0.342 Sum_probs=120.5
Q ss_pred ceEEecccccCCHHHHHHHHHHHHHHhcCC--CCcEEEEeCCCchhhHHHHHHHhCCCeeeeecCCCCCCcccchheeec
Q 030119 29 IMFQDITTLLLKPKEFKDTIDMFVERYKGK--NISVVAGIEARGFIFGPPIALAIGAKFVPLRKPKKLPGKVISEEYILE 106 (182)
Q Consensus 29 ~~~~d~~~l~~~~~~~~~l~~~la~~~~~~--~~d~Iv~v~~~G~~~a~~la~~l~~p~~~~~k~~~~~~~~~~~~~~~~ 106 (182)
..|+|...++.+|+.++.+++.|++.+.+. ++|+|+|++.+|+++|..+|+.|++|++++||..+.++...
T Consensus 68 p~Y~d~~~~l~~p~~~~~l~~~la~~i~~~~~~~DvIvg~~~gGi~~A~~lA~~L~~p~~~vrk~~k~~G~~~------- 140 (243)
T 3dez_A 68 PIYTDNRITLSYPETRTLIENGFVETIKEAFPEVEVIAGTATAGIPHGAIIADKMNLPLAYIRSKPKDHGAGN------- 140 (243)
T ss_dssp SEEECTTGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEETTTTHHHHHHHHHHTTCCEEEECSSCC-----C-------
T ss_pred CEEEeCHHhccCHHHHHHHHHHHHHHHHhhCCCCCEEEEecCchHHHHHHHHHHcCCCEEEEEEeeccCCcee-------
Confidence 589999999999999999999999998754 79999999999999999999999999999998765433221
Q ss_pred cccceEEEeecccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeecCchhhcccc--CCCeEEeeee
Q 030119 107 YGRDCLEMHVGAVESAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELPDLKGRERLN--GKPLYVLVES 181 (182)
Q Consensus 107 ~~~~~~~~~~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~~~~~~~~l~--~~~~~sl~~~ 181 (182)
.++ +.+.+|++||||||++|||+|+.++++.|+++|++++++++++++...++.++++ ++++++|+++
T Consensus 141 ----~ie---g~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~d~~~~~a~e~l~~~gi~~~sL~~~ 210 (243)
T 3dez_A 141 ----QIE---GRVTKGQKMVIIEDLISTGGSVLDAVAAAQREGADVLGVVAIFTYELPKATANFEKASVKLVTLSNY 210 (243)
T ss_dssp ----CEE---SCCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHHTCCEEESSCH
T ss_pred ----EEE---eccCCCCEEEEEEeeccccHHHHHHHHHHHHCCCEEEEEEEEEECCCchHHHHHHhcCCCEEEEeeH
Confidence 121 4445999999999999999999999999999999999999999998778888884 8999999986
No 9
>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.94 E-value=2.8e-26 Score=173.84 Aligned_cols=162 Identities=19% Similarity=0.202 Sum_probs=127.2
Q ss_pred HHhhccccCCCCCCCCceEEecccccCCHHHHHHHHHHHHHHhcCCCCcEEEEeCCCchhhHHHHHHHhCCCeeeeecCC
Q 030119 13 GIKDQIRVVPNFPKPGIMFQDITTLLLKPKEFKDTIDMFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKFVPLRKPK 92 (182)
Q Consensus 13 ~~~~~~r~~~~~~~~~~~~~d~~~l~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~~p~~~~~k~~ 92 (182)
++++.+|.+|+|+.+.-.|++...+..+++.++.+++.|+..+.. ++|+|+|++.||+++|..+|+.+++|+.+.++..
T Consensus 7 ~~~~~~~~~~~~~~~~g~~i~~~k~~~~~~~~~~~~~~la~~~~~-~~d~Iv~v~~gg~~~a~~la~~l~~p~~~~rk~~ 85 (175)
T 1vch_A 7 TVGGVTRHVPLIEPLPGRRIPLVEFLGDPEFTRAAAEALRPLVPK-EAEILFTTETSPIPLTHVLAEALGLPYVVARRRR 85 (175)
T ss_dssp EETTEEEEECEEEEETTEEEECCCCTTCHHHHHHHHHHHGGGSCT-TCCEEEEESSTHHHHHHHHHHHHTCCEEEEBSSC
T ss_pred EecceeeEcCceEcCCCcEEEeeeccCCHHHHHHHHHHHHHHhcc-CCCEEEEeCCcChHHHHHHHHHhCCCEEEEEecC
Confidence 578889999999987435799999999999999999999998865 7899999999999999999999999998887655
Q ss_pred CC--CCcccchheeeccc-cceEEEeeccc--CCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeecCchhh
Q 030119 93 KL--PGKVISEEYILEYG-RDCLEMHVGAV--ESAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELPDLKGR 167 (182)
Q Consensus 93 ~~--~~~~~~~~~~~~~~-~~~~~~~~~~~--~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~~~~~~ 167 (182)
+. ........+...++ .+.+++....+ .+|++||||||++|||+|+.++++.|+++|++.+.+++++++...
T Consensus 86 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~v~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~V~~~~l~~~~~~--- 162 (175)
T 1vch_A 86 RPYMEDPIIQEVQTLTLGVGEVLWLDRRFAEKLLNQRVVLVSDVVASGETMRAMEKMVLRAGGHVVARLAVFRQGTP--- 162 (175)
T ss_dssp CTTCCSCEEEECCC------CEEEECHHHHHHHTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECSCC---
T ss_pred CCCCCcceeeeeeccccCCceEEEEecccccccCCCEEEEEeccccchHHHHHHHHHHHHcCCeEEEEEEEEecCCC---
Confidence 43 11111111111111 12344432222 289999999999999999999999999999999999999987642
Q ss_pred ccccCCCeEEeeeeC
Q 030119 168 ERLNGKPLYVLVESH 182 (182)
Q Consensus 168 ~~l~~~~~~sl~~~~ 182 (182)
+.+++||+.++
T Consensus 163 ----~~~~~sl~~~~ 173 (175)
T 1vch_A 163 ----GLAVDTVAELP 173 (175)
T ss_dssp ----SSCCEEEEECC
T ss_pred ----CcceEEEEeec
Confidence 78999998874
No 10
>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A*
Probab=99.93 E-value=1e-24 Score=177.71 Aligned_cols=169 Identities=21% Similarity=0.341 Sum_probs=126.0
Q ss_pred HHHHHHhhccccCCCCCCCCceEEecccccCCHHHHHHHHHHHHHHhcCCCCcEEEEeCCCchhhHHHHHHHhCCCeeee
Q 030119 9 ARINGIKDQIRVVPNFPKPGIMFQDITTLLLKPKEFKDTIDMFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKFVPL 88 (182)
Q Consensus 9 ~~~~~~~~~~r~~~~~~~~~~~~~d~~~l~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~~p~~~~ 88 (182)
+.++.|.+.++.-.-....++ +++..++.+|+.++.+++.|+..+.+.++|+|+|++.||+++|..+|+.+++|++++
T Consensus 82 ~~~~~l~~~l~~~~~v~~G~f--~~~~~ll~~p~l~~~la~~la~~~~~~~~d~Iv~V~~rG~~~A~~lA~~L~vp~v~~ 159 (291)
T 1o57_A 82 EFVQTLGQSLANPERILPGGY--VYLTDILGKPSVLSKVGKLFASVFAEREIDVVMTVATKGIPLAYAAASYLNVPVVIV 159 (291)
T ss_dssp HHHHHHHHHHTCGGGEETTTE--ECCTTTTTCHHHHHHHHHHHHHHTTTSCCSEEEEETTTTHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHCCCcccCCe--EEehhhhCCHHHHHHHHHHHHHHhhccCCCEEEEECCCCHHHHHHHHHHhCCCEEEE
Confidence 345555555544322111144 457889999999999999999999766899999999999999999999999999998
Q ss_pred ecCCCC-CCcccchheeecc--ccceEEEeecccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeecCch
Q 030119 89 RKPKKL-PGKVISEEYILEY--GRDCLEMHVGAVESAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELPDLK 165 (182)
Q Consensus 89 ~k~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~~~~ 165 (182)
++..+. ++...+.++.... ....+++....+.+|++||||||++|||+|+.+++++|+++||++++++|++++.+.
T Consensus 160 rk~~~~t~~~~~~~~~~~g~~~~~~~~~l~~~~l~~Gk~VLIVDDViTTG~Tl~~a~~~L~~aGA~vV~v~vlvdr~~~- 238 (291)
T 1o57_A 160 RKDNKVTEGSTVSINYVSGSSNRIQTMSLAKRSMKTGSNVLIIDDFMKAGGTINGMINLLDEFNANVAGIGVLVEAEGV- 238 (291)
T ss_dssp BCC-----CCEEEEEEECSSCCSEEEEEEEGGGSCTTCEEEEEEEEESSSHHHHHHHHHTGGGTCEEEEEEEEEEESSC-
T ss_pred EEeccCCCCceeeeeeecccccceeeEEEecccCCCcCEEEEEEEEcCcHHHHHHHHHHHHHCCCEEEEEEEEEEcCcc-
Confidence 876543 2333332332211 112455554455589999999999999999999999999999999999999999864
Q ss_pred hhccccCCCeEEeeeeC
Q 030119 166 GRERLNGKPLYVLVESH 182 (182)
Q Consensus 166 ~~~~l~~~~~~sl~~~~ 182 (182)
++++ +.|++||++++
T Consensus 239 -~~~l-~~~~~SL~~~~ 253 (291)
T 1o57_A 239 -DERL-VDEYMSLLTLS 253 (291)
T ss_dssp -TTSC-CSCCEEEEEEE
T ss_pred -cccc-CCceEEEEEEc
Confidence 4444 48999999863
No 11
>2p1z_A Phosphoribosyltransferase; STRU genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.44A {Corynebacterium diphtheriae}
Probab=99.93 E-value=5.9e-25 Score=167.61 Aligned_cols=139 Identities=21% Similarity=0.254 Sum_probs=113.4
Q ss_pred ceEEecccccCCHHHHHHHHHHHHHHhcCCCCcEEEEeCCCchhhHHHHHHHhCCCe--eeeecCCCCCCcccchheeec
Q 030119 29 IMFQDITTLLLKPKEFKDTIDMFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKF--VPLRKPKKLPGKVISEEYILE 106 (182)
Q Consensus 29 ~~~~d~~~l~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~~p~--~~~~k~~~~~~~~~~~~~~~~ 106 (182)
..|+|...++.+|+..+.+++.|++.+.+.++|+|+|+|.+|+++|..+|+.++.|+ .+.++..+..+..
T Consensus 33 ~~y~d~~~~~~~~~~~~~l~~~la~~i~~~~~d~vv~v~~gG~~~a~~la~~l~~~~~~~~~rk~~~~~g~~-------- 104 (180)
T 2p1z_A 33 DYYVDLRRATLHARASRLIGELLRELTADWDYVAVGGLTLGADPVATSVMHADGREIHAFVVRKEAKKHGMQ-------- 104 (180)
T ss_dssp --CCCTHHHHTSHHHHHHHHHHHHHTTTTSCCSEEEEETTTHHHHHHHHHHSSSSCCEEEEECSCCC-CC-C--------
T ss_pred CEEEEChhhcCCHHHHHHHHHHHHHHHhhcCCCEEEEecCCCHHHHHHHHHHHCCCCCeEEEEeccccccch--------
Confidence 578999999999999999999999998766899999999999999999999998765 5555543211110
Q ss_pred cccceEEEeecccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeecCchhhcccc--CCCeEEeeeeC
Q 030119 107 YGRDCLEMHVGAVESAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELPDLKGRERLN--GKPLYVLVESH 182 (182)
Q Consensus 107 ~~~~~~~~~~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~~~~~~~~l~--~~~~~sl~~~~ 182 (182)
..++ +...+|++||||||++|||+|+.++++.|+++|++++++++++++.. +++++++ ++|++||++++
T Consensus 105 ---~~~~---g~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~-~g~~~l~~~g~~~~sl~~~~ 175 (180)
T 2p1z_A 105 ---RRIE---GPDVVGKKVLVVEDTTTTGNSPLTAVKALREAGAEVVGVATVVDRAT-GAADVIAAEGLEYRYILGLE 175 (180)
T ss_dssp ---CSEE---SSCCTTCEEEEEEEECSSSHHHHHHHHHHHHHTCEEEEEEEEEC-CC-CHHHHHHTTTCCEEEEECST
T ss_pred ---hhcc---CCCCCcCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEcCc-chHHHHHhcCCeEEEEEEHH
Confidence 1111 33358999999999999999999999999999999999999999986 6778774 79999999874
No 12
>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix}
Probab=99.92 E-value=6.5e-25 Score=167.09 Aligned_cols=137 Identities=22% Similarity=0.334 Sum_probs=116.5
Q ss_pred ceEEecccccCCHHHHHHHHHHHHHHh-cCC-CCcEEEEeCCCchhhHHHHHHHhCCCeeeeecCCCCCCcccchheeec
Q 030119 29 IMFQDITTLLLKPKEFKDTIDMFVERY-KGK-NISVVAGIEARGFIFGPPIALAIGAKFVPLRKPKKLPGKVISEEYILE 106 (182)
Q Consensus 29 ~~~~d~~~l~~~~~~~~~l~~~la~~~-~~~-~~d~Iv~v~~~G~~~a~~la~~l~~p~~~~~k~~~~~~~~~~~~~~~~ 106 (182)
..|.|...++.+|+..+.++..+++.+ .+. ++|+|+|++.||+++|..+|+.+++|+.+.++..+..+..
T Consensus 26 ~~f~d~~~l~~~~~~~~~l~~~l~~~~~~~~~~~~~iv~v~~~G~~~a~~la~~l~~p~~~~r~~~~~~g~~-------- 97 (178)
T 2yzk_A 26 SVYIDMRRLLGDESSYSVALDLLLEVGGQDLARSSAVIGVATGGLPWAAMLALRLSKPLGYVRPERKGHGTL-------- 97 (178)
T ss_dssp EEEECGGGGTTCHHHHHHHHHHHHHHHHHHHHHCSEEEEETTTTHHHHHHHHHHHTCCEEEECCCCTTSCCC--------
T ss_pred CeEEEChHhccCHHHHHHHHHHHHHHHhcccCCCCEEEEecccchHHHHHHHHHHCCCEEEEEccccccCcc--------
Confidence 468999999999999999999999888 554 6899999999999999999999999998877654311111
Q ss_pred cccceEEEeecccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeecCchhhcccc--CCCeEEeeee
Q 030119 107 YGRDCLEMHVGAVESAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELPDLKGRERLN--GKPLYVLVES 181 (182)
Q Consensus 107 ~~~~~~~~~~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~~~~~~~~l~--~~~~~sl~~~ 181 (182)
..+ .+.+ +|++||||||++|||+|+.++++.|++.|++++.+++++++.. ++.++++ ++|++||+++
T Consensus 98 ---~~i---~~~~-~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~r~~-~~~~~l~~~g~~~~sl~~~ 166 (178)
T 2yzk_A 98 ---SQV---EGDP-PKGRVVVVDDVATTGTSIAKSIEVLRSNGYTVGTALVLVDRGE-GAGELLARMGVRLVSVATL 166 (178)
T ss_dssp ---CCC---BTCC-CSSEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCS-SHHHHHHTTTCEEEEEEEH
T ss_pred ---cee---cccC-CCCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEcCc-CHHHHHHHcCCcEEEEeeH
Confidence 011 1456 8999999999999999999999999999999999999999876 6778884 7999999986
No 13
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}
Probab=99.92 E-value=2e-24 Score=167.89 Aligned_cols=138 Identities=16% Similarity=0.362 Sum_probs=117.2
Q ss_pred ceEEecccccCCHHHHHHHHHHHHHHhcC--CCCcEEEEeCCCchhhHHHHHHHhCCCeeeeecCCCCCCcccchheeec
Q 030119 29 IMFQDITTLLLKPKEFKDTIDMFVERYKG--KNISVVAGIEARGFIFGPPIALAIGAKFVPLRKPKKLPGKVISEEYILE 106 (182)
Q Consensus 29 ~~~~d~~~l~~~~~~~~~l~~~la~~~~~--~~~d~Iv~v~~~G~~~a~~la~~l~~p~~~~~k~~~~~~~~~~~~~~~~ 106 (182)
..|+|+..++.+|+.++.+++.|++.+.. .++|+|+|+|.+|+++|..+|..+++|+++.++..+..+..
T Consensus 30 ~~y~d~~~l~~~~~~~~~l~~~la~~i~~~~~~~d~Iv~v~~~g~~~a~~la~~l~~p~~~~rk~~k~~g~~-------- 101 (205)
T 2wns_A 30 PIYIDLRGIVSRPRLLSQVADILFQTAQNAGISFDTVCGVPYTALPLATVICSTNQIPMLIRRKETKDYGTK-------- 101 (205)
T ss_dssp EEEECGGGGGGSHHHHHHHHHHHHHHHHHTTCCCSEEEECTTTTHHHHHHHHHHHTCCEEEECCTTTTSSSC--------
T ss_pred CEEEeChHhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEcCCchHHHHHHHHHHHCcCEEEEecCcCccCcc--------
Confidence 58999999999999999999999998865 47899999999999999999999999999887654311111
Q ss_pred cccceEEEeecccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeecCchhhcccc--CCCeEEeeee
Q 030119 107 YGRDCLEMHVGAVESAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELPDLKGRERLN--GKPLYVLVES 181 (182)
Q Consensus 107 ~~~~~~~~~~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~~~~~~~~l~--~~~~~sl~~~ 181 (182)
..+ .+.+.+|++||||||++|||+|+.++++.|+++|++++++++++++. .++.++++ +++++||+++
T Consensus 102 ---~~~---~g~~~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v~~~~l~~~~-~~~~~~l~~~g~~v~sl~~~ 171 (205)
T 2wns_A 102 ---RLV---EGTINPGETCLIIEDVVTSGSSVLETVEVLQKEGLKVTDAIVLLDRE-QGGKDKLQAHGIRLHSVCTL 171 (205)
T ss_dssp ---CSE---ESCCCTTCBEEEEEEEESSSHHHHHHHHHHHHTTCBCCEEEEEEECC-SSHHHHHHTTTCEEEEEEEH
T ss_pred ---ccc---cCCCCCCCEEEEEEEeccccHHHHHHHHHHHHCCCEEEEEEEEEEcC-cchHHHHHHcCCeEEEEEEH
Confidence 111 24455899999999999999999999999999999999999999985 46777774 7999999986
No 14
>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis}
Probab=99.92 E-value=2.7e-24 Score=169.68 Aligned_cols=138 Identities=16% Similarity=0.248 Sum_probs=112.3
Q ss_pred CceEEecccccCCHHHHHHHHHHHHHHhcCC--CCcEEEEeCCCchhhHHHHHHHh------CCCeeeeecCCCCCCccc
Q 030119 28 GIMFQDITTLLLKPKEFKDTIDMFVERYKGK--NISVVAGIEARGFIFGPPIALAI------GAKFVPLRKPKKLPGKVI 99 (182)
Q Consensus 28 ~~~~~d~~~l~~~~~~~~~l~~~la~~~~~~--~~d~Iv~v~~~G~~~a~~la~~l------~~p~~~~~k~~~~~~~~~ 99 (182)
+..|+|.. ++.+|+.++.+++.|++.+.+. ++|+|+|++.+|+++|..+|..| ++|+++.||..+.++..
T Consensus 49 Sp~y~d~~-~~~~p~~~~~l~~~la~~i~~~~~~~D~Ivg~~~gGi~~A~~lA~~L~~~~g~~~p~~~~RK~~k~~g~~- 126 (232)
T 3mjd_A 49 SPYFFNAG-LFNTGAQLATLADYYAQLIIKSDVKYDILFGPAYKGIPLVAAISTVLALKYNIDMPYAFDRKEAKDHGEG- 126 (232)
T ss_dssp EEEEECGG-GCCBHHHHHHHHHHHHHHHHHCCCCCSEEEECTTTHHHHHHHHHHHHHHHHCCCCBEEEECCC--------
T ss_pred cceEeccc-ccCCHHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcHHHHHHHHHHHhhhcCCCCcEEEEEeecccCCCC-
Confidence 35899985 6789999999999999999754 79999999999999999999997 89999998865433221
Q ss_pred chheeeccccceEEEeecccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeecCchhh--------ccc-
Q 030119 100 SEEYILEYGRDCLEMHVGAVESAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELPDLKGR--------ERL- 170 (182)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~~~~~~--------~~l- 170 (182)
..++ +...+|++|||||||+|||+|+.++++.|+++|++++++++++++.+ +++ +.+
T Consensus 127 ----------~~i~---g~~~~Gk~VLIVDDVitTG~Tl~~a~~~L~~~Ga~vv~v~vlvdr~e-~g~~~~~~a~~~~~~ 192 (232)
T 3mjd_A 127 ----------GVFV---GADMTNKKVLLIDDVMTAGTAFYESYNKLKIINAKIAGVVLSIDRQE-KAKDSDISATKKISQ 192 (232)
T ss_dssp ----------CCEE---ESCCTTCEEEEECSCCSSSHHHHHHHHHHHTTTCEEEEEEEEEECCB-CCTTSSSCHHHHHHH
T ss_pred ----------ceEe---ccCCCCCEEEEEEeeccccHHHHHHHHHHHHCCCEEEEEEEEEECCc-CCccccchhHHHHHH
Confidence 1121 32338999999999999999999999999999999999999999975 343 333
Q ss_pred -cCCCeEEeeee
Q 030119 171 -NGKPLYVLVES 181 (182)
Q Consensus 171 -~~~~~~sl~~~ 181 (182)
.|+|++||+++
T Consensus 193 ~~gv~v~sL~~~ 204 (232)
T 3mjd_A 193 DFNIPVLAVTNF 204 (232)
T ss_dssp HHCCCEEEEEEH
T ss_pred HcCCcEEEEEeH
Confidence 38999999986
No 15
>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A
Probab=99.92 E-value=2.8e-24 Score=167.98 Aligned_cols=136 Identities=18% Similarity=0.314 Sum_probs=113.9
Q ss_pred ceEEecccccCCHHHHHHHHHHHHHHhcCC--CCcEEEEeCCCchhhHHHHHHHh------CCCeeeeecCCCCCCcccc
Q 030119 29 IMFQDITTLLLKPKEFKDTIDMFVERYKGK--NISVVAGIEARGFIFGPPIALAI------GAKFVPLRKPKKLPGKVIS 100 (182)
Q Consensus 29 ~~~~d~~~l~~~~~~~~~l~~~la~~~~~~--~~d~Iv~v~~~G~~~a~~la~~l------~~p~~~~~k~~~~~~~~~~ 100 (182)
..|.| ..++.+|+.++.+++.|++.+.+. ++|+|+|++.+|+++|..+|+.| ++|+++.||..+.++..
T Consensus 32 ~~y~d-~~ll~~~~~~~~~~~~la~~i~~~~~~~d~Ivgv~~~G~~~a~~lA~~L~~~~~~~~~~~~~rk~~~~~~~~-- 108 (213)
T 1lh0_A 32 PYFFN-AGLFNTGRDLALLGRFYAEALVDSGIEFDLLFGPAYKGIPIATTTAVALAEHHDKDLPYCFNRKEAKDHGEG-- 108 (213)
T ss_dssp EEEEC-GGGCCBHHHHHHHHHHHHHHHHHHCCCCSEEECCTTTHHHHHHHHHHHHHHHHCCCCBEEEECSSCCSSTTC--
T ss_pred cEEEe-cCccCCHHHHHHHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHHHHHhhCCCCCEEEEEeccCccCCC--
Confidence 57889 568999999999999999988643 68999999999999999999999 89999988765432211
Q ss_pred hheeeccccceEEEeecccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeecCchhhccc---------c
Q 030119 101 EEYILEYGRDCLEMHVGAVESAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELPDLKGRERL---------N 171 (182)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~~~~~~~~l---------~ 171 (182)
..++ +...+| +||||||++|||+|+.++++.|+++|++++++++++++.+ ++++++ .
T Consensus 109 ---------~~~~---g~~~~g-~VliVDDvitTG~Tl~~a~~~l~~~Ga~~v~v~~l~dr~~-~g~~~l~~~~~~~~~~ 174 (213)
T 1lh0_A 109 ---------GSLV---GSALQG-RVMLVDDVITAGTAIRESMEIIQAHGATLAGVLISLDRQE-RGRGEISAIQEVERDY 174 (213)
T ss_dssp ---------SSEE---ESCCCS-EEEEECSCCSSSCHHHHHHHHHHHTTCEEEEEEEEEECCB-BCSSSSBHHHHHHHHH
T ss_pred ---------Ccee---CCCCCC-CEEEEEecccchHHHHHHHHHHHHCCCeEEEEEEEEEccc-CcccchhhHHHHHHHc
Confidence 1121 223389 9999999999999999999999999999999999999987 566665 4
Q ss_pred CCCeEEeeee
Q 030119 172 GKPLYVLVES 181 (182)
Q Consensus 172 ~~~~~sl~~~ 181 (182)
++|++||+++
T Consensus 175 g~~v~sl~~~ 184 (213)
T 1lh0_A 175 GCKVISIITL 184 (213)
T ss_dssp CCEEEEEEEH
T ss_pred CCCeEEEEEH
Confidence 8999999986
No 16
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=99.91 E-value=1.5e-23 Score=179.75 Aligned_cols=159 Identities=21% Similarity=0.319 Sum_probs=128.5
Q ss_pred hHHHHHHhhccccC-CCCCC-CC---ceEEecccccCCHHHHHHHHHHHHHHhcCCCCcEEEEeCCCchhhHHHHHHHhC
Q 030119 8 DARINGIKDQIRVV-PNFPK-PG---IMFQDITTLLLKPKEFKDTIDMFVERYKGKNISVVAGIEARGFIFGPPIALAIG 82 (182)
Q Consensus 8 ~~~~~~~~~~~r~~-~~~~~-~~---~~~~d~~~l~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~ 82 (182)
.+.++.|.+.-... ..|+. +| ..|+|++.++.+|+.++.+++.|++.+.+.++|+|+|++.+|+++|..+|+.++
T Consensus 260 ~~~~~~l~~~~a~~~g~F~L~SG~~S~~y~D~~~l~~~p~~~~~l~~~la~~~~~~~~D~Ivg~~~gGi~~A~~lA~~L~ 339 (453)
T 3qw4_B 260 VELAKALVDSHCVRFGNFTLKSGKSSPIYIDLRRLVTYPAIMRLVAREYAKVLRHYKFDRIAGLPYAALPIASAISNEMN 339 (453)
T ss_dssp HHHHHHHHHTTSEEESCCBCTTSSBCSEEECCGGGGGCHHHHHHHHHHHHHHHTTSCCSEEEECTTTTHHHHHHHHHHHC
T ss_pred HHHHHHHHHCCCCEECCEeccCCCcCCEEEechHhccCHHHHHHHHHHHHHHhccCCCCEEEeccCCcHHHHHHHHHHhC
Confidence 44555665554333 45663 33 479999999999999999999999999877899999999999999999999999
Q ss_pred CCeeeeecCCCCCCcccchheeeccccceEEEeecccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeec
Q 030119 83 AKFVPLRKPKKLPGKVISEEYILEYGRDCLEMHVGAVESAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELP 162 (182)
Q Consensus 83 ~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~ 162 (182)
+|+++.||..+..+.. ..+ .+.+.+|++||||||++|||+|+.++++.|++.|++++++++++++.
T Consensus 340 ~p~~~~rk~~k~~g~~-----------~~i---~g~~~~G~~VliVDDvitTG~T~~~~~~~l~~~g~~vv~v~~lvdr~ 405 (453)
T 3qw4_B 340 VPLIYPRREAKIYGTK-----------AAI---EGEYKKGDRVVIIDDLVSTGETKVEAIEKLRSAGLEVVSIVVLVDRD 405 (453)
T ss_dssp CCEEEESSCC------------------CE---ESCCCTTCEEEEEEEEECC-CCHHHHHHHHHTTTCEEEEEEEEEECS
T ss_pred CCEEEEEeeccccCcC-----------ceE---ecccCCCCEEEEEeeeechhHHHHHHHHHHHHcCCEEEEEEEEEECC
Confidence 9999998765422211 112 14456999999999999999999999999999999999999999987
Q ss_pred Cchhhcccc--CCCeEEeeee
Q 030119 163 DLKGRERLN--GKPLYVLVES 181 (182)
Q Consensus 163 ~~~~~~~l~--~~~~~sl~~~ 181 (182)
. +++++++ |+|++||+++
T Consensus 406 ~-~g~~~l~~~g~~v~sL~~~ 425 (453)
T 3qw4_B 406 M-GAKAFLNKLGYDFEAVVGL 425 (453)
T ss_dssp S-SHHHHHHHTTCCEEEEEEH
T ss_pred c-chHHHHHhcCCCEEEEeEH
Confidence 4 6777774 8999999986
No 17
>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1
Probab=99.91 E-value=1.4e-23 Score=163.59 Aligned_cols=139 Identities=27% Similarity=0.374 Sum_probs=117.1
Q ss_pred ceEEecccccCCHHHHHHHHHHHHHHhcCC--CCcEEEEeCCCchhhHHHHHHHhCCCeeeeecCCCCCCcccchheeec
Q 030119 29 IMFQDITTLLLKPKEFKDTIDMFVERYKGK--NISVVAGIEARGFIFGPPIALAIGAKFVPLRKPKKLPGKVISEEYILE 106 (182)
Q Consensus 29 ~~~~d~~~l~~~~~~~~~l~~~la~~~~~~--~~d~Iv~v~~~G~~~a~~la~~l~~p~~~~~k~~~~~~~~~~~~~~~~ 106 (182)
..|+|+..++.+|+..+.+++.|++.+... ++|+|+|++.||+++|..+|+.+++|+.+++|.++.++..
T Consensus 36 ~~~~D~~~l~~~~~~~~~~~~~la~~i~~~~~~~d~vv~v~~~g~~~a~~la~~l~~p~~~~rk~~~~~g~~-------- 107 (211)
T 2aee_A 36 PIYTDNRVTLSYPKTRDLIENGFVETIKAHFPEVEVIAGTATAGIPHGAIIADKMTLPFAYIRSKPKDHGAG-------- 107 (211)
T ss_dssp SEEECGGGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEETTTTHHHHHHHHHHHTCCEEEECSSCC----C--------
T ss_pred CeEEeChhhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEeccCcHHHHHHHHHHhCCCEEEEEeecCCcCCc--------
Confidence 378999999999999999999999888542 6899999999999999999999999999888765422211
Q ss_pred cccceEEEeecccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeecCchhhcccc--CCCeEEeeee
Q 030119 107 YGRDCLEMHVGAVESAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELPDLKGRERLN--GKPLYVLVES 181 (182)
Q Consensus 107 ~~~~~~~~~~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~~~~~~~~l~--~~~~~sl~~~ 181 (182)
..+. +...+|++||||||++|||+|+.++++.|++.|++++++++++++...++.+++. ++++++++++
T Consensus 108 ---~~i~---g~~~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l~~~~~~~~~~~l~~~~~~~~~l~~~ 178 (211)
T 2aee_A 108 ---NQIE---GRVLKGQKMVIIEDLISTGGSVLDAAAAASREGADVLGVVAIFTYELPKASQNFKEAGIKLITLSNY 178 (211)
T ss_dssp ---CSEE---SCCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHHTCCEEESCCH
T ss_pred ---ceec---CCCCCcCEEEEEeecccchHHHHHHHHHHHHCCCcEEEEEEEEecccccHHHHHHhCCCCEEEEeeH
Confidence 1121 3334899999999999999999999999999999999999999998777888885 7899998874
No 18
>3n2l_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, infectious diseases; 2.10A {Vibrio cholerae}
Probab=99.91 E-value=1.5e-23 Score=165.88 Aligned_cols=136 Identities=18% Similarity=0.292 Sum_probs=110.0
Q ss_pred ceEEecccccCCHHHHHHHHHHHHHHhcCC--CCcEEEEeCCCchhhHHHHHHHh------CCCeeeeecCCCCCCcccc
Q 030119 29 IMFQDITTLLLKPKEFKDTIDMFVERYKGK--NISVVAGIEARGFIFGPPIALAI------GAKFVPLRKPKKLPGKVIS 100 (182)
Q Consensus 29 ~~~~d~~~l~~~~~~~~~l~~~la~~~~~~--~~d~Iv~v~~~G~~~a~~la~~l------~~p~~~~~k~~~~~~~~~~ 100 (182)
..|+|. .++.+|+.++.+++.|++.+.+. ++|+|+|++.+|+++|..+|..| ++|+++.||..+.++..
T Consensus 57 p~y~d~-~ll~~p~~l~~l~~~la~~i~~~~~~~D~Vvg~~~gGi~~A~~lA~~L~~~~g~~vp~~~~RK~~k~~g~~-- 133 (238)
T 3n2l_A 57 PYFFNA-GLFNTGRDLARLGRFYAAALVDSGIEFDVLFGPAYKGIPIATTTAVALADHHDVDTPYCFNRKEAKNHGEG-- 133 (238)
T ss_dssp EEEECG-GGCCBHHHHHHHHHHHHHHHHHHTCCCSEEEECTTTHHHHHHHHHHHHHHHSCCCCBEEEECCC---------
T ss_pred cEEEEC-CCCCCHHHHHHHHHHHHHHHHhhCCCCCEEEecccChHHHHHHHHHHHhHhhCCCccEEEEeeccCCCCCC--
Confidence 588897 47799999999999999998643 79999999999999999999997 89999998876543321
Q ss_pred hheeeccccceEEEeecccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeecCchhhc------cc---c
Q 030119 101 EEYILEYGRDCLEMHVGAVESAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELPDLKGRE------RL---N 171 (182)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~~~~~~~------~l---~ 171 (182)
..++ +...+| +||||||++|||+|+.+++++|+++|++++++++++++.+. +++ ++ .
T Consensus 134 ---------~~i~---G~~~~G-~VliVDDvitTG~T~~~a~~~l~~~Ga~vv~v~vlvdr~eg-G~~~l~a~~~~~~~~ 199 (238)
T 3n2l_A 134 ---------GNLV---GSKLEG-RVMLVDDVITAGTAIRESMELIQANKADLAGVLVAIDRQEK-GKGELSAIQEVERDF 199 (238)
T ss_dssp ----------CEE---ESCCCS-EEEEECSCCSSSHHHHHHHHHHHHTTCEEEEEEEEEECCCB-CSSSSBHHHHHHHHH
T ss_pred ---------ceEe---ccccCC-cEEEEeeeecccHHHHHHHHHHHHcCCEEEEEEEEEEcccC-ccchhhHHHHHHHHc
Confidence 1122 323389 99999999999999999999999999999999999998752 332 23 3
Q ss_pred CCCeEEeeee
Q 030119 172 GKPLYVLVES 181 (182)
Q Consensus 172 ~~~~~sl~~~ 181 (182)
|+|++||+++
T Consensus 200 Gv~v~SL~~~ 209 (238)
T 3n2l_A 200 GCAVISIVSL 209 (238)
T ss_dssp CCEEEEEEEH
T ss_pred CCCEEEEEEH
Confidence 8999999986
No 19
>2ps1_A Orotate phosphoribosyltransferase 1; alpha beta, oprtase-OA-PRPP complex; HET: ORO PRP; 1.75A {Saccharomyces cerevisiae} PDB: 2pry_A* 2prz_A*
Probab=99.90 E-value=4.7e-23 Score=162.31 Aligned_cols=137 Identities=16% Similarity=0.279 Sum_probs=113.1
Q ss_pred ceEEecccccCCHHHHHHHHHHHHHHhcCC--CCcEEEEeCCCchhhHHHHHHHh---------CCCeeeeecCCCCCCc
Q 030119 29 IMFQDITTLLLKPKEFKDTIDMFVERYKGK--NISVVAGIEARGFIFGPPIALAI---------GAKFVPLRKPKKLPGK 97 (182)
Q Consensus 29 ~~~~d~~~l~~~~~~~~~l~~~la~~~~~~--~~d~Iv~v~~~G~~~a~~la~~l---------~~p~~~~~k~~~~~~~ 97 (182)
..|+| ..++.+|+.++.+++.|+..+.+. ++|+|++++.+|+++|..+|+.+ ++|+++.++.++..+.
T Consensus 36 ~~y~d-~~ll~~~~~~~~l~~~la~~i~~~~~~~d~Vvg~~~~G~~~a~~lA~~L~~~~~~~~~~~p~~~~rk~~k~~g~ 114 (226)
T 2ps1_A 36 PYFFN-LGLFNTGKLLSNLATAYAIAIIQSDLKFDVIFGPAYKGIPLAAIVCVKLAEIGGSKFQNIQYAFNRKEAKDHGE 114 (226)
T ss_dssp EEEEC-GGGCCBHHHHHHHHHHHHHHHHHHTCCCSEEEECTTTHHHHHHHHHHHHHHHSTTTTTTCEEEEEEEEEESSTT
T ss_pred CEEEe-cCccCCHHHHHHHHHHHHHHHHHhCCCCCEEEEeccCCHHHHHHHHHHHHhhhccccCCCCEEEEechhhhcCC
Confidence 57888 568999999999999999988642 68999999999999999999999 9999988875432221
Q ss_pred ccchheeeccccceEEEeecccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeecCchhhc---------
Q 030119 98 VISEEYILEYGRDCLEMHVGAVESAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELPDLKGRE--------- 168 (182)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~~~~~~~--------- 168 (182)
+.+.. ...+ +|++||||||++|||+|+.++++.|+++|++++++++++++.+. +++
T Consensus 115 ------------~~~~~-~~~i-~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l~dr~~~-g~~~~~~~~~~~ 179 (226)
T 2ps1_A 115 ------------GGIIV-GSAL-ENKRILIIDDVMTAGTAINEAFEIISNAKGQVVGSIIALDRQEV-VSTDDKEGLSAT 179 (226)
T ss_dssp ------------CEEEE-ESCC-TTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCBB-SCTTCSSCCBHH
T ss_pred ------------CceEe-cCCC-CcCEEEEEEecccChHHHHHHHHHHHHcCCeEEEEEEEEEccCc-ccccccccchHH
Confidence 22222 1345 89999999999999999999999999999999999999999864 332
Q ss_pred ----cccCCCeEEeeee
Q 030119 169 ----RLNGKPLYVLVES 181 (182)
Q Consensus 169 ----~l~~~~~~sl~~~ 181 (182)
+..++|++||+++
T Consensus 180 ~~~~~~~g~~v~sl~~~ 196 (226)
T 2ps1_A 180 QTVSKKYGIPVLSIVSL 196 (226)
T ss_dssp HHHHHHHTCCEEEEEEH
T ss_pred HHHHHhcCCeEEEEecH
Confidence 2358999999986
No 20
>3hvu_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, 2-(N-morphol ethanesulfonic acid (MES), IDP01892; HET: MES; 1.95A {Bacillus anthracis str} PDB: 3h83_A* 3kb8_A*
Probab=99.82 E-value=1.1e-19 Score=140.94 Aligned_cols=134 Identities=15% Similarity=0.204 Sum_probs=103.2
Q ss_pred cCCCCCCCCceEEecccccCCHHHHHHHHHHHHHHhcCC---CCcEEEEeCCCchhhHHHHHHHhCCCe--eeeecCCCC
Q 030119 20 VVPNFPKPGIMFQDITTLLLKPKEFKDTIDMFVERYKGK---NISVVAGIEARGFIFGPPIALAIGAKF--VPLRKPKKL 94 (182)
Q Consensus 20 ~~~~~~~~~~~~~d~~~l~~~~~~~~~l~~~la~~~~~~---~~d~Iv~v~~~G~~~a~~la~~l~~p~--~~~~k~~~~ 94 (182)
+-|.||.++++.-|+..++.+++.++.....|+.++... ++++|+|++.||+.+|..+|+.|++|+ .++++.+.
T Consensus 16 ~~~~f~~~~~~~~di~~~l~s~~~i~~~i~~LA~~I~~~~~~~~~vVVgi~~GG~~~a~~La~~L~~p~~~~~i~~~~Y- 94 (204)
T 3hvu_A 16 ENLYFQSNAMMNQDIEKVLISEEQIQEKVLELGAIIAEDYKNTVPLAIGVLKGAMPFMADLLKRTDTYLEMDFMAVSSY- 94 (204)
T ss_dssp ---CCCCCCCGGGGEEEEEECHHHHHHHHHHHHHHHHHHTSSSCCEEEEETTTTHHHHHHHHHTCCSCCEEEEEEEEEC-
T ss_pred CCCCCCCchhhhhcCCcEeCCHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcchHHHHHHHHHHhCCCcceEEEEEEEe-
Confidence 448899999887788889999999999999998877432 579999999999999999999999984 34443211
Q ss_pred CCcccchheeeccccceEEEe---ecccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeecC
Q 030119 95 PGKVISEEYILEYGRDCLEMH---VGAVESAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELPD 163 (182)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~~ 163 (182)
.... ++.+.+++. ...+ +|++||||||+++||+|+.++++.|++.|++.+.++++++++.
T Consensus 95 ~~~~--------~~~~~v~i~~~l~~~~-~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~ 157 (204)
T 3hvu_A 95 GHST--------VSTGEVKILKDLDTSV-EGRDILIVEDIIDSGLTLSYLVDLFKYRKAKSVKIVTLLDKPT 157 (204)
T ss_dssp SGGG--------TTSCCEEEEECCSSCC-TTCEEEEEEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECGG
T ss_pred cCCC--------ccCCcEEEEcCCCccC-CCCEEEEEeceeCchHHHHHHHHHHHHcCCCEEEEEEEEECCC
Confidence 0000 011122222 1234 8999999999999999999999999999999999999998864
No 21
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=99.81 E-value=2.7e-19 Score=132.43 Aligned_cols=121 Identities=19% Similarity=0.256 Sum_probs=90.8
Q ss_pred cccCCHHHHHHHHHHHHHHhcCCCCcEEEEeCCCchhhHHHHHHHhCCCeee-eecCCCCCCcccchheeeccccceEEE
Q 030119 36 TLLLKPKEFKDTIDMFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKFVP-LRKPKKLPGKVISEEYILEYGRDCLEM 114 (182)
Q Consensus 36 ~l~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~~p~~~-~~k~~~~~~~~~~~~~~~~~~~~~~~~ 114 (182)
.++.+++.+..+++.|+.++.+.++|+|+|+++||+++|..+|+.+++|++. +++... .+... ......+..
T Consensus 3 ~~~~s~~~~~~~~~~la~~i~~~~~d~iv~v~~gg~~~a~~la~~l~~~~~~~~~~~~~-~~~~~------~~~~~~~~~ 75 (153)
T 1vdm_A 3 KVYLTWWQVDRAIFALAEKLREYKPDVIIGVARGGLIPAVRLSHILGDIPLKVIDVKFY-KGIDE------RGEKPVITI 75 (153)
T ss_dssp EEECCHHHHHHHHHHHHHHHHHHCCSEEEEETTTTHHHHHHHHHHTTSCCEEEEEEECC-CC--C------CCSSCEEEE
T ss_pred ceECCHHHHHHHHHHHHHHHHccCCCEEEEECCcCHHHHHHHHHHhCCCceEEEEEEEe-cCCcc------cccceeEec
Confidence 3466788888889999988864578999999999999999999999999753 332211 11000 000012332
Q ss_pred eecccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeecC
Q 030119 115 HVGAVESAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELPD 163 (182)
Q Consensus 115 ~~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~~ 163 (182)
......+|++||||||++|||+|+.++++.|+++|++.+.+++++.+..
T Consensus 76 ~~~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~ga~~v~~~~l~~~~~ 124 (153)
T 1vdm_A 76 PIHGDLKDKRVVIVDDVSDTGKTLEVVIEEVKKLGAKEIKIACLAMKPW 124 (153)
T ss_dssp CCCSCCBTCEEEEEEEEESSCHHHHHHHHHHHTTTBSEEEEEEEEECTT
T ss_pred cCCcCCCCCEEEEEecccCChHHHHHHHHHHHHcCCCEEEEEEEEeCCC
Confidence 2222338999999999999999999999999999999999999998764
No 22
>1fsg_A HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: PRP 9DG; 1.05A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1qk3_A* 1qk4_A* 1qk5_A* 1dbr_A
Probab=99.79 E-value=1.9e-19 Score=142.25 Aligned_cols=142 Identities=17% Similarity=0.108 Sum_probs=102.8
Q ss_pred CCCCCCCCceEEecccccCCHHHHHHHHHHHHHHhcC---CCCcEEEEeCCCchhhHHHHHHHhCCCeeeeecC-CCCCC
Q 030119 21 VPNFPKPGIMFQDITTLLLKPKEFKDTIDMFVERYKG---KNISVVAGIEARGFIFGPPIALAIGAKFVPLRKP-KKLPG 96 (182)
Q Consensus 21 ~~~~~~~~~~~~d~~~l~~~~~~~~~l~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l~~p~~~~~k~-~~~~~ 96 (182)
...|+.+++.+.|+..++.+++.+...++.|+.++.. .++|+|+|++.||+++|..+|+.|+.++...+.+ .+.+.
T Consensus 32 ~~~F~~~~~~~~di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~vVvgi~~gG~~~a~~la~~L~~~~~~~~~k~~~~P~ 111 (233)
T 1fsg_A 32 ADDFLVPPHCKPYIDKILLPGGLVKDRVEKLAYDIHRTYFGEELHIICILKGSRGFFNLLIDYLATIQKYSGRESSVPPF 111 (233)
T ss_dssp GGGSCCCTTTTTTCCEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEEETTTHHHHHHHHHHHHHHHHHCSSCCSSCSC
T ss_pred cccCccCCcchhhCcEEeeCHHHHHHHHHHHHHHHHHHcCCCCCEEEEEccCCHHHHHHHHHHhCCcccccccccCCCCc
Confidence 3568888876778888999999999999999888753 3789999999999999999999998732222110 00010
Q ss_pred c--cc-chheeeccccceEEEee---cccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeecC
Q 030119 97 K--VI-SEEYILEYGRDCLEMHV---GAVESAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELPD 163 (182)
Q Consensus 97 ~--~~-~~~~~~~~~~~~~~~~~---~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~~ 163 (182)
. .. ...|..++..++..+.. ..+ +||+||||||+++||+|+.++++.|++.|++.+.++++++++.
T Consensus 112 ~~~~i~~~~y~~~~~~~~~~~~~~~~~~~-~Gk~VLIVDDii~TG~Tl~~a~~~L~~~ga~~V~vavl~~k~~ 183 (233)
T 1fsg_A 112 FEHYVRLKSYQNDNSTGQLTVLSDDLSIF-RDKHVLIVEDIVDTGFTLTEFGERLKAVGPKSMRIATLVEKRT 183 (233)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSCGGGG-TTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred EEEEEEEEeccCccccccEEEecCCcccc-CCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCc
Confidence 0 00 00111111112223321 234 8999999999999999999999999999999999999998775
No 23
>1z7g_A HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; flexibility, trans CIS peptide bond isomerization, nucleotide binding; 1.90A {Homo sapiens} SCOP: c.61.1.1 PDB: 1hmp_A* 1bzy_A 3gep_A* 3ggc_A* 3ggj_A* 1d6n_A* 2vfa_A*
Probab=99.79 E-value=3.7e-19 Score=139.21 Aligned_cols=132 Identities=14% Similarity=0.202 Sum_probs=101.0
Q ss_pred CCCCCCCCceEEecccccCCHHHHHHHHHHHHHHhcC---CCCcEEEEeCCCchhhHHHHHHHhC---------CCe--e
Q 030119 21 VPNFPKPGIMFQDITTLLLKPKEFKDTIDMFVERYKG---KNISVVAGIEARGFIFGPPIALAIG---------AKF--V 86 (182)
Q Consensus 21 ~~~~~~~~~~~~d~~~l~~~~~~~~~l~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l~---------~p~--~ 86 (182)
.++||.+++++-|+..++.+++.++...+.|+.++.. .+.++|+|+++||+++|..+|+.|+ +|+ .
T Consensus 18 ~~~f~~~~~~~~di~~il~~~~~~~~~~~~La~~i~~~~~~~~~vVvgi~~GG~~~a~~la~~L~~~~~i~~g~~~~~~~ 97 (217)
T 1z7g_A 18 LDLFCIPNHYAEDLERVFIPHGLIMDRTERLARDVMKEMGGHHIVALCVLKGGYKFFADLLDYIKALNRNSDRSIPMTVD 97 (217)
T ss_dssp GGGSCCCGGGTTTEEEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEECSSCCHHHHHHHHHHHHHHTTCSSCCCEEEE
T ss_pred ccccccCcccccccceEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEECCCCHHHHHHHHHHhCCccccCCCceEeeee
Confidence 4578888887778889999999999988999888753 3688999999999999999999998 564 2
Q ss_pred eeecCCCCCCcccchheeeccccceEEEe----ecccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeec
Q 030119 87 PLRKPKKLPGKVISEEYILEYGRDCLEMH----VGAVESAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELP 162 (182)
Q Consensus 87 ~~~k~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~ 162 (182)
+++..+ +.+. ...+++.+. ...+ +|++||||||+++||+|+.++++.|++.|++.+.++++++++
T Consensus 98 ~i~~~~-y~~~---------~~~~~~~~~~~~~~~~~-~gk~VliVDDii~TG~Tl~~~~~~L~~~g~~~v~~~~l~~k~ 166 (217)
T 1z7g_A 98 FIRLKS-YCND---------QSTGDIKVIGGDDLSTL-TGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKR 166 (217)
T ss_dssp EECBC--------------------CCBCCSSCGGGG-TTSEEEEEEEECCCHHHHHHHHHHHHTTCCSEEEEEEEEEEC
T ss_pred eEEEEE-eccc---------ccccceEEecCCCcccc-CCCEEEEEeceeCcHHHHHHHHHHHHhcCCCEEEEEEEEECc
Confidence 333111 1110 001111111 1234 899999999999999999999999999999999999999876
Q ss_pred C
Q 030119 163 D 163 (182)
Q Consensus 163 ~ 163 (182)
.
T Consensus 167 ~ 167 (217)
T 1z7g_A 167 T 167 (217)
T ss_dssp C
T ss_pred c
Confidence 5
No 24
>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1
Probab=99.79 E-value=3.6e-19 Score=135.71 Aligned_cols=125 Identities=15% Similarity=0.226 Sum_probs=93.9
Q ss_pred eEEecccccCCHHHHHHHHHHHHHHhcCC---CCcEEEEeCCCchhhHHHHHHHhCCCeee--eecCCCCCCcccchhee
Q 030119 30 MFQDITTLLLKPKEFKDTIDMFVERYKGK---NISVVAGIEARGFIFGPPIALAIGAKFVP--LRKPKKLPGKVISEEYI 104 (182)
Q Consensus 30 ~~~d~~~l~~~~~~~~~l~~~la~~~~~~---~~d~Iv~v~~~G~~~a~~la~~l~~p~~~--~~k~~~~~~~~~~~~~~ 104 (182)
++.|+..++.+++.++..+..|++++... ++++|+|++.||+++|..+|+.|++|+.. ++..+ +....
T Consensus 6 ~~~di~~~l~~~~~i~~~~~~la~~i~~~~~~~~~vvv~i~~gg~~~a~~la~~l~~p~~~~~~~~~~-y~~~~------ 78 (183)
T 1hgx_A 6 MMDDLERVLYNQDDIQKRIRELAAELTEFYEDKNPVMICVLTGAVFFYTDLLKHLDFQLEPDYIICSS-YSGTK------ 78 (183)
T ss_dssp -CTTEEEEEECHHHHHHHHHHHHHHHHHHHTTTCCEEEEETTTTHHHHHHHHTTCCSCCEEEEEEEEC------------
T ss_pred cCcCcceEEcCHHHHHHHHHHHHHHHHHHcCCCCcEEEEeCcChHHHHHHHHHHcCCCcceeEEEEEe-cCCcc------
Confidence 44567888999999999999999888532 68999999999999999999999999754 21111 11000
Q ss_pred eccccceEEEe-ecccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeecC
Q 030119 105 LEYGRDCLEMH-VGAVESAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELPD 163 (182)
Q Consensus 105 ~~~~~~~~~~~-~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~~ 163 (182)
..+..++... ...+ +|++||||||+++||+|+.++++.|++.|++.+.+++++++..
T Consensus 79 -~~~~~~~~~~~~~~~-~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~v~~~~l~~~~~ 136 (183)
T 1hgx_A 79 -STGNLTISKDLKTNI-EGRHVLVVEDIIDTGLTMYQLLNNLQMRKPASLKVCTLCDKDI 136 (183)
T ss_dssp -----CEEEECCSSCC-TTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred -cccceEEeecCCCCC-CCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEEEEEecCc
Confidence 0011111111 1234 8999999999999999999999999999999999999998764
No 25
>2jbh_A Phosphoribosyltransferase domain-containing prote; glycosyltransferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens}
Probab=99.77 E-value=1.1e-18 Score=137.13 Aligned_cols=130 Identities=15% Similarity=0.249 Sum_probs=97.8
Q ss_pred CCCCCCceEEecccccCCHHHHHHHHHHHHHHhcC---CCCcEEEEeCCCchhhHHHHHHHhC---------CCe--eee
Q 030119 23 NFPKPGIMFQDITTLLLKPKEFKDTIDMFVERYKG---KNISVVAGIEARGFIFGPPIALAIG---------AKF--VPL 88 (182)
Q Consensus 23 ~~~~~~~~~~d~~~l~~~~~~~~~l~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l~---------~p~--~~~ 88 (182)
.|+.++..+-|+..++.+++.+...+..|+.++.. .++++|+|++.||+++|..+|+.|+ +|+ .++
T Consensus 28 ~F~~~~~~~~di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~vvv~i~~gG~~~a~~la~~L~~~~~~~~~~~p~~~~~i 107 (225)
T 2jbh_A 28 LFTYPQHYYGDLEYVLIPHGIIVDRIERLAKDIMKDIGYSDIMVLCVLKGGYKFXADLVEHLKNISRNSDRFVSMKVDFI 107 (225)
T ss_dssp GSCCCGGGTTSEEEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEEETTTHHHHHHHHHHHHHHHHHSSCCCCEEEEEE
T ss_pred HCccCccccccCceEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEEcCCCEehhHHHHHHhhhhccccccCCCceEEEE
Confidence 46677766567788899999999888888887753 3689999999999999999999998 664 333
Q ss_pred ecCCCCCCcccchheeeccccceEEEe----ecccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeecC
Q 030119 89 RKPKKLPGKVISEEYILEYGRDCLEMH----VGAVESAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELPD 163 (182)
Q Consensus 89 ~k~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~~ 163 (182)
+..+ +.+. +..+++.+. ...+ +||+||||||+++||+|+.++++.|++.|++.+.++++++++.
T Consensus 108 ~~~~-y~~~---------~~~~~~~~~~~~~~~~v-~Gk~VllVDDii~TG~Tl~~a~~~L~~~ga~~V~va~l~~k~~ 175 (225)
T 2jbh_A 108 RLKS-YRND---------QSMGEMQIIGGDDLSTL-AGKNVLIVEDVVGTGRTMKALLSNIEKYKPNMIKVASLLVKRT 175 (225)
T ss_dssp EEC--------------------CCEESSSCGGGG-TTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred EEEe-ccCc---------cccccEEEecCCCcccc-CCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCc
Confidence 3221 1110 000111111 1234 8999999999999999999999999999999999999998765
No 26
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=99.77 E-value=3.5e-18 Score=138.57 Aligned_cols=115 Identities=23% Similarity=0.290 Sum_probs=94.2
Q ss_pred HHHHHhcCCCCcEEEEeCCCchhhHHHHHHHhCCCeeeeecCCCCCCcccchheeeccccceEEEe--ecccCCCCeEEE
Q 030119 50 MFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKFVPLRKPKKLPGKVISEEYILEYGRDCLEMH--VGAVESAERALV 127 (182)
Q Consensus 50 ~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~gk~VLl 127 (182)
.|++++.+.+.++|++++.||+.+|..+|+.|++|+.+++|+++.++ ..++. .+.+ +||+|||
T Consensus 144 ~la~~i~~~~~~vVV~pd~Gg~~~A~~lA~~L~~p~~~i~K~r~~~g--------------~v~i~~~~~dv-~gk~vli 208 (286)
T 3lrt_A 144 AIVRYYKNVDVDYVVSPDDGGLARVADISAKLGKKHFFIEKKRIDDR--------------TVEMKVPNVDV-NGKKLLI 208 (286)
T ss_dssp HHHHHHTTSCCSEEEESSSSSHHHHHHHHHHHTCEEEEEEEEEETTE--------------EEEEEESCCCC-TTCEEEE
T ss_pred HHHHHHHhcCCCEEEEECCCccHHHHHHHHHhCCCeEEEeeeecCCC--------------cEEEeeccccC-CcCEEEE
Confidence 34444444467899999999999999999999999999887653221 12222 2345 9999999
Q ss_pred EeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeecCchhhccccCCCeEEeee
Q 030119 128 VDDLIATGGTLCAAINLLERVGAEVVECACVIELPDLKGRERLNGKPLYVLVE 180 (182)
Q Consensus 128 VDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~~~~~~~~l~~~~~~sl~~ 180 (182)
|||+++||+|+.++++.|++.|++.+.++++|+....++.+++ +.++..++.
T Consensus 209 VDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~th~v~s~~a~~~l-~s~i~~vv~ 260 (286)
T 3lrt_A 209 VDDIISTGGTIAKSSGLLREKGASKIYVSAVHGLFVNGSENKI-LQNADEIHV 260 (286)
T ss_dssp EEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECCCTTHHHHH-TTTCSEEEE
T ss_pred EeccccccHHHHHHHHHHHhCCCCEEEEEEEEeecCchHHHHH-HcCCCEEEE
Confidence 9999999999999999999999999999999999888889999 777777664
No 27
>3ozf_A Hypoxanthine-guanine-xanthine phosphoribosyltrans; transferase-transferase inhibitor complex; HET: HPA; 1.94A {Plasmodium falciparum fcr-3} PDB: 3ozg_A* 1cjb_A*
Probab=99.77 E-value=4.6e-19 Score=140.95 Aligned_cols=139 Identities=17% Similarity=0.158 Sum_probs=100.1
Q ss_pred CCCCCceEEecccccCCHHHHHHHHHHHHHHhcC---CCCcEEEEeCCCchhhHHHHHHHhCCCeeee-ecCCCCCCcc-
Q 030119 24 FPKPGIMFQDITTLLLKPKEFKDTIDMFVERYKG---KNISVVAGIEARGFIFGPPIALAIGAKFVPL-RKPKKLPGKV- 98 (182)
Q Consensus 24 ~~~~~~~~~d~~~l~~~~~~~~~l~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l~~p~~~~-~k~~~~~~~~- 98 (182)
|..|..++.|+..++.+++.++...+.|+.++.+ .+.++|+|++.||+.+|..|++.|+.+.+.+ ||..+.+...
T Consensus 49 f~~p~~~~~di~~vli~~~~I~~~i~~LA~~I~~~~~~~~~vVVgIl~gG~~fa~~La~~L~~~~v~~~rk~gklP~~v~ 128 (250)
T 3ozf_A 49 FMIPAHYKKYLTKVLVPNGVIKNRIEKLAYDIKKVYNNEEFHILCLLKGSRGFFTALLKHLSRIHNYSAVETSKPLFGEH 128 (250)
T ss_dssp SCCCGGGGGGEEEEEECHHHHHHHHHHHHHHHHHHHTTCCEEEEEEETTTHHHHHHHHHHHHHHHHHHCCTTCCCCEEEE
T ss_pred ccCchhhhccCeEEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcchHHHHHHHHHHhccccccccccccCCCceEE
Confidence 3334445557788899999999888888887743 2578999999999999999999998433321 2222222111
Q ss_pred --cchheeeccccceEEEee---cccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeecC
Q 030119 99 --ISEEYILEYGRDCLEMHV---GAVESAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELPD 163 (182)
Q Consensus 99 --~~~~~~~~~~~~~~~~~~---~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~~ 163 (182)
...+|..+++.+.+++.. ..+ +|++||||||+++||+|+.++++.|++.|++.+.++++++++.
T Consensus 129 fI~~ssY~~~~s~g~v~i~~~~~~~~-~gk~VlIVDDii~TG~Tl~~~~~~L~~~g~~~v~va~l~~k~~ 197 (250)
T 3ozf_A 129 YVRVKSYCNDQSTGTLEIVSEDLSCL-KGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLFIKRT 197 (250)
T ss_dssp EEEEEEEETTEEEEEEEEECCCGGGG-TTCEEEEEEEEESSSHHHHHHHHHHGGGCCSEEEEEEEEEECC
T ss_pred EEEEEEecCCcccCcEEEEcCCcccc-CCCEEEEEeceeCchHHHHHHHHHHHhcCCCEEEEEEEEECCc
Confidence 011232233333444432 233 8999999999999999999999999999999999999999875
No 28
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}
Probab=99.75 E-value=5.9e-18 Score=129.22 Aligned_cols=122 Identities=16% Similarity=0.180 Sum_probs=90.2
Q ss_pred cccccCCHHHHHHHHHHHHHHhcCC---CCcEEEEeCCCchhhHHHHHHHhCCCe--eeeecCCCCCCcccchheeeccc
Q 030119 34 ITTLLLKPKEFKDTIDMFVERYKGK---NISVVAGIEARGFIFGPPIALAIGAKF--VPLRKPKKLPGKVISEEYILEYG 108 (182)
Q Consensus 34 ~~~l~~~~~~~~~l~~~la~~~~~~---~~d~Iv~v~~~G~~~a~~la~~l~~p~--~~~~k~~~~~~~~~~~~~~~~~~ 108 (182)
+..++.+++.+...+..|+.++... ++|+|+|++.||+++|..+|+.|++|+ .+++..+...+... .+
T Consensus 12 ~~~~l~~~~~i~~~~~~La~~i~~~~~~~~~vvv~i~~gG~~~a~~la~~l~~p~~~~~i~~~~y~~~~~~-------~~ 84 (185)
T 2geb_A 12 IEEILITEEQLKAKVKELGEMITRDYEGKDLVLIGVLKGAIMFMSGLSRAIDLPLSIDFLAVSSYGSSTKS-------SG 84 (185)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTTHHHHHHHHHTCCSCCEEEEEEEEECSTTHHH-------HC
T ss_pred cceEEeCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcCcHHHHHHHHHHcCCCceeEEEEEEecCCCCcc-------Cc
Confidence 3456788888888888888877532 689999999999999999999999986 33332111011000 01
Q ss_pred cceEEEe-ecccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeecC
Q 030119 109 RDCLEMH-VGAVESAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELPD 163 (182)
Q Consensus 109 ~~~~~~~-~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~~ 163 (182)
+..+... ...+ +|++||||||+++||+|+.++++.|++.|++.+.+++++++..
T Consensus 85 ~~~~~~~~~~~~-~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~ 139 (185)
T 2geb_A 85 IVKIIKDHDIDI-EGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPE 139 (185)
T ss_dssp CEEEEECCCSCC-TTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred cEEEeccCCCCC-CCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEEEEEECCC
Confidence 1111111 1234 8999999999999999999999999999999999999998764
No 29
>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1
Probab=99.75 E-value=6.1e-18 Score=131.79 Aligned_cols=123 Identities=12% Similarity=0.163 Sum_probs=90.1
Q ss_pred EEecccccCCHHHHHHHHHHHHHHhcC---------CCCcEEEEeCCCchhhHHHHHHHh---CCCe--eeeecCCCCCC
Q 030119 31 FQDITTLLLKPKEFKDTIDMFVERYKG---------KNISVVAGIEARGFIFGPPIALAI---GAKF--VPLRKPKKLPG 96 (182)
Q Consensus 31 ~~d~~~l~~~~~~~~~l~~~la~~~~~---------~~~d~Iv~v~~~G~~~a~~la~~l---~~p~--~~~~k~~~~~~ 96 (182)
+.|+..++.+++.+......|+.++.+ .++++|+|++.||+++|..+|+.| ++|+ .++++.+...+
T Consensus 20 ~~di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~~~~~~~vvvgi~~gG~~~a~~la~~L~~~~~p~~~~~i~~~~y~~~ 99 (211)
T 1pzm_A 20 YPMSARTLVTQEQVWAATAKCAKKIAADYKDFHLTADNPLYLLCVLKGSFIFTADLARFLADEGVPVKVEFICASSYGSG 99 (211)
T ss_dssp CTTEEEEEECHHHHHHHHHHHHHHHHHHHGGGTCBTTBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEEEEEBCC-----
T ss_pred ccccceEEeCHHHHHHHHHHHHHHHHHhcccccccCCCCCEEEEEccchHHHHHHHHHHHhhcCCCceeeeEEeeeccCc
Confidence 446777888988888777778776642 357899999999999999999999 9994 34432211000
Q ss_pred cccchheeeccccceEEEe---ecccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeecC
Q 030119 97 KVISEEYILEYGRDCLEMH---VGAVESAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELPD 163 (182)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~---~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~~ 163 (182)
... .+...+. ...+ +||+||||||+++||+|+.++++.|++.|++.+.++++++++.
T Consensus 100 ~~~---------~~~~~~~~~~~~~v-~gk~VllVDDvi~TG~Tl~aa~~~L~~~Ga~~V~v~~l~~k~~ 159 (211)
T 1pzm_A 100 VET---------SGQVRMLLDVRDSV-ENRHIMLVEDIVDSAITLQYLMRFMLAKKPASLKTVVLLDKPS 159 (211)
T ss_dssp -----------------CCBCCSSCC-TTCEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred ccc---------CCceEEeccCCCCC-CCCEEEEECCccccHHHHHHHHHHHHhcCCCEEEEEEEEecCc
Confidence 000 0111111 1234 8999999999999999999999999999999999999998764
No 30
>3o7m_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, salvage of nucleosides and nucleotides; HET: GOL; 1.98A {Bacillus anthracis} SCOP: c.61.1.0
Probab=99.74 E-value=1.2e-17 Score=127.65 Aligned_cols=121 Identities=12% Similarity=0.209 Sum_probs=92.2
Q ss_pred ecccccCCHHHHHHHHHHHHHHhcCC---CCcEEEEeCCCchhhHHHHHHHhCCCeee--eecCCCCCCcccchheeecc
Q 030119 33 DITTLLLKPKEFKDTIDMFVERYKGK---NISVVAGIEARGFIFGPPIALAIGAKFVP--LRKPKKLPGKVISEEYILEY 107 (182)
Q Consensus 33 d~~~l~~~~~~~~~l~~~la~~~~~~---~~d~Iv~v~~~G~~~a~~la~~l~~p~~~--~~k~~~~~~~~~~~~~~~~~ 107 (182)
|+..++.+++.++.....|+.++... ++++|+|++.||+.+|..+|+.|++|+.. ++..+...+. .
T Consensus 7 di~~~l~~~~~i~~~i~~La~~I~~~~~~~~~vvVgi~~gG~~~a~~la~~L~~p~~i~~i~~~~Y~~~~---------~ 77 (186)
T 3o7m_A 7 EIKDTLISEEQLQEKVKELALQIERDFEGEEIVVIAVLKGSFVFAADLIRHIKNDVTIDFISASSYGNQT---------E 77 (186)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTTHHHHHHHHTTCCSCEEEEEEEEEECC-------------
T ss_pred cccEEecCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcchHHHHHHHHHHhCCCCceEEEEEEEecCCC---------c
Confidence 56778899999988888888877432 67899999999999999999999998633 4322110000 0
Q ss_pred ccceEEEee---cccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeecC
Q 030119 108 GRDCLEMHV---GAVESAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELPD 163 (182)
Q Consensus 108 ~~~~~~~~~---~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~~ 163 (182)
+.+.+++.. ..+ +|++||||||+++||+|+.++++.|++.|++.+.++++++++.
T Consensus 78 ~~~~v~i~~~~~~~~-~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~ 135 (186)
T 3o7m_A 78 TTGKVKLLKDIDVNI-TGKNVIVVEDIIDSGLTLHFLKDHFFMHKPKALKFCTLLDKPE 135 (186)
T ss_dssp ---CEEEEECCCSCC-TTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred ccCcEEEEecCCCCC-CcCEEEEEcCeeCCcHHHHHHHHHHHhcCCcEEEEEEEEECCC
Confidence 111222221 233 8999999999999999999999999999999999999998874
No 31
>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A*
Probab=99.74 E-value=2.5e-17 Score=129.06 Aligned_cols=123 Identities=13% Similarity=0.180 Sum_probs=88.6
Q ss_pred ecccccCCHHHHHHHHHHHHHHhcCC---CC-------cEEEEeCCCchhhHHHHHHHh---CCCee--eeecCCCCCCc
Q 030119 33 DITTLLLKPKEFKDTIDMFVERYKGK---NI-------SVVAGIEARGFIFGPPIALAI---GAKFV--PLRKPKKLPGK 97 (182)
Q Consensus 33 d~~~l~~~~~~~~~l~~~la~~~~~~---~~-------d~Iv~v~~~G~~~a~~la~~l---~~p~~--~~~k~~~~~~~ 97 (182)
|+..++.+++.+...++.|+.++... +. ++|+|++.||+++|..||+.+ ++|+. +++..+...+.
T Consensus 6 di~~~li~~~~i~~~~~~La~~I~~~~~~~~~~~~~p~~vVv~v~~gG~~~a~~La~~L~~~~~p~~~~~l~~~~y~~~~ 85 (220)
T 1tc1_A 6 FAEKILFTEEEIRTRIKEVAKRIADDYKGKGLRPYVNPLVLISVLKGSFMFTADLCRALCDFNVPVRMEFICVSSYGEGL 85 (220)
T ss_dssp TSCCEEECHHHHHHHHHHHHHHHHHHHTTSCCBTTTBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEEEEEEEECC----
T ss_pred ccccEeeCHHHHHHHHHHHHHHHHHHccCcccccCCCCeEEEEeccCCHHHHHHHHHHHHhcCCCccccEEEEeecCCCc
Confidence 45667788888888888887766421 23 899999999999999999999 99953 33321110000
Q ss_pred ccchheeeccccceEEEe-ecccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeecC
Q 030119 98 VISEEYILEYGRDCLEMH-VGAVESAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELPD 163 (182)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~-~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~~ 163 (182)
. ..+.-++... ...+ +||+||||||++|||+|+.++++.|++.|++.+.++++++++.
T Consensus 86 ~-------~~~~v~~~~~~~~~v-~Gk~VLLVDDii~TG~Tl~~a~~~L~~~Ga~~V~v~~l~~k~~ 144 (220)
T 1tc1_A 86 T-------SSGQVRMLLDTRHSI-EGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKRE 144 (220)
T ss_dssp ------------CEEEECCSSCC-TTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECTT
T ss_pred c-------cCCcEEEecCCCccC-CCCEEEEEeCccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCc
Confidence 0 0011111111 1234 8999999999999999999999999999999999999998764
No 32
>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding P pyrimidine biosynthesis; 1.60A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 1a4x_A 2igb_A* 1xz8_A* 1non_A 1xzn_A*
Probab=99.73 E-value=1.1e-17 Score=127.07 Aligned_cols=123 Identities=15% Similarity=0.235 Sum_probs=84.6
Q ss_pred ccccCCHHHHHHHHHHHHHHhcC----CCCcEEEEeCCCchhhHHHHHHHhC----CC--eeeeecCCCCCCcccchhee
Q 030119 35 TTLLLKPKEFKDTIDMFVERYKG----KNISVVAGIEARGFIFGPPIALAIG----AK--FVPLRKPKKLPGKVISEEYI 104 (182)
Q Consensus 35 ~~l~~~~~~~~~l~~~la~~~~~----~~~d~Iv~v~~~G~~~a~~la~~l~----~p--~~~~~k~~~~~~~~~~~~~~ 104 (182)
..++.+++.+..+...|+.++.. .++|+|+|++.||+++|..+|+.++ +| +.++.+........ ...
T Consensus 4 ~~~l~~~~~i~~~~~~la~~i~~~~~~~~~~~iv~i~~~G~~~a~~la~~l~~~~~~~~~~~~l~~~~~~~~~~---~~~ 80 (181)
T 1a3c_A 4 KAVILDEQAIRRALTRIAHEMIERNKGMNNCILVGIKTRGIYLAKRLAERIEQIEGNPVTVGEIDITLYRDDLS---KKT 80 (181)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHCC----CEEEEESHHHHHHHHHHHHHHHHHHSSCCEEEEEEEECCC----------
T ss_pred ccCccCHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcCCCHHHHHHHHHHHhHHhCCCcccCeEEEEEecCccc---ccC
Confidence 34677888888888888877743 2689999999999999999999997 44 33343221111100 000
Q ss_pred ec--cccceEEEeecccCCCCeEEEEeCccCchHHHHHHHHHHHHcC-CeEEEEEEEEeec
Q 030119 105 LE--YGRDCLEMHVGAVESAERALVVDDLIATGGTLCAAINLLERVG-AEVVECACVIELP 162 (182)
Q Consensus 105 ~~--~~~~~~~~~~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~G-a~~v~~~vl~~~~ 162 (182)
.. .....+.+ ...+ +|++||||||++|||+|+.++++.|+++| ++.+.+++++++.
T Consensus 81 ~~~~~~~~~~~~-~~~~-~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~~~l~~k~ 139 (181)
T 1a3c_A 81 SNDEPLVKGADI-PVDI-TDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVDRG 139 (181)
T ss_dssp -CCCCEEEEEEC-SSCC-TTSEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred ccceeeeccccc-CcCC-CCCEEEEEeCccCcHHHHHHHHHHHHhcCCCcEEEEEEEEccC
Confidence 00 00011111 1234 89999999999999999999999999997 9999999999876
No 33
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=99.73 E-value=1e-17 Score=135.97 Aligned_cols=120 Identities=23% Similarity=0.303 Sum_probs=91.0
Q ss_pred HHHHHHHhcC-CCCcEEEEeCCCchhhHHHHHHHhCCCeeeeecCCCCCCcccchheeeccccceEEEeec-ccCCCCeE
Q 030119 48 IDMFVERYKG-KNISVVAGIEARGFIFGPPIALAIGAKFVPLRKPKKLPGKVISEEYILEYGRDCLEMHVG-AVESAERA 125 (182)
Q Consensus 48 ~~~la~~~~~-~~~d~Iv~v~~~G~~~a~~la~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~gk~V 125 (182)
+..|++++.+ .+.++|++++.||+.+|..+|+.+++|+.+++|.++.++ ...+.+ .+ .+ +||+|
T Consensus 143 ~~~La~~i~~~~~~~vVv~pd~Gg~~~a~~la~~l~~p~~~i~k~r~~~~------------~~~~~l-~g~~v-~Gk~V 208 (284)
T 1u9y_A 143 VPKLAEYVKDKLNDPIVLAPDKGALEFAKTASKILNAEYDYLEKTRLSPT------------EIQIAP-KTLDA-KDRDV 208 (284)
T ss_dssp HHHHHHHHTTTCSSCEEEESSGGGHHHHHHHHHHHTCCEEEBC----------------------CCB-SSCCC-TTCCE
T ss_pred HHHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHhCCCEEEEEEEEcCCC------------eEEEEe-cCccC-CCCEE
Confidence 3444444443 267899999999999999999999999998876653221 011111 12 45 89999
Q ss_pred EEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeecCchhhccccCCCeEEeeee
Q 030119 126 LVVDDLIATGGTLCAAINLLERVGAEVVECACVIELPDLKGRERLNGKPLYVLVES 181 (182)
Q Consensus 126 LlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~~~~~~~~l~~~~~~sl~~~ 181 (182)
|||||++|||+|+.++++.|++.|++.+.++++|.....++.+++.+.++.+++..
T Consensus 209 lIVDDii~TG~Tl~~aa~~Lk~~Ga~~V~~~~~h~v~s~~a~~~l~~~~i~~vv~t 264 (284)
T 1u9y_A 209 FIVDDIISTGGTMATAVKLLKEQGAKKIIAACVHPVLIGDALNKLYSAGVEEVVGT 264 (284)
T ss_dssp EEEEEECSSSHHHHHHHHHHHHTTCCSEEEEEEECCCCTTHHHHHHHHTCSEEEEE
T ss_pred EEEecccCchHHHHHHHHHHHHCCCcEEEEEEEeEecCcHHHHHHHhCCCCEEEEe
Confidence 99999999999999999999999999999999998888788888876667776653
No 34
>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A*
Probab=99.73 E-value=1.4e-17 Score=129.11 Aligned_cols=121 Identities=16% Similarity=0.181 Sum_probs=88.8
Q ss_pred ccccCCHHHHHHHHHHHHHHhcCC---CCcEEEEeCCCchhhHHHHHHHhCCCe--eeeecCCCCCCcccchheeecccc
Q 030119 35 TTLLLKPKEFKDTIDMFVERYKGK---NISVVAGIEARGFIFGPPIALAIGAKF--VPLRKPKKLPGKVISEEYILEYGR 109 (182)
Q Consensus 35 ~~l~~~~~~~~~l~~~la~~~~~~---~~d~Iv~v~~~G~~~a~~la~~l~~p~--~~~~k~~~~~~~~~~~~~~~~~~~ 109 (182)
..++.+++.+...+..|+.++... ++|+|+|++.||+++|..+|+.+++|+ .++++.+. ..... ..++
T Consensus 33 ~~~l~~~~~i~~~~~~La~~i~~~~~~~~~viv~v~~gG~~~a~~la~~l~~p~~~~~~~~~~y-~~~~~------~~~~ 105 (205)
T 1yfz_A 33 EEILITEEQLKAKVKELGEMITRDYEGKDLVLIGVLKGAIMFMSGLSRAIDLPLSIDFLAVSSY-GSSTK------SSGI 105 (205)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTHHHHHHHHHHTCCSCCEEEEEEEEEC-SHHHH------HHCC
T ss_pred ceEEcCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcCCHHHHHHHHHHhCCCceeEEEEEEec-cCCcc------ccce
Confidence 345778888888888888877532 689999999999999999999999996 23332111 00000 0011
Q ss_pred ceEEEe-ecccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeecC
Q 030119 110 DCLEMH-VGAVESAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELPD 163 (182)
Q Consensus 110 ~~~~~~-~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~~ 163 (182)
..+... ...+ +|++||||||++|||+|+.++++.|++.|++.+.++++++++.
T Consensus 106 ~~~~~~~~~~~-~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~ 159 (205)
T 1yfz_A 106 VKIIKDHDIDI-EGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPE 159 (205)
T ss_dssp EEEEECCCSCC-TTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred EEEeccCCCCC-CcCEEEEECCccCcHHHHHHHHHHHHhcCCCEEEEEEEEecCc
Confidence 111111 1234 8999999999999999999999999999999999999998764
No 35
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=99.72 E-value=3.6e-17 Score=134.56 Aligned_cols=121 Identities=23% Similarity=0.243 Sum_probs=92.4
Q ss_pred HHHHHHHHhcCCCCcEEEEeCCCchhhHHHHHHHhCCCeeeeecCCCCCCcccchheeeccccceEEEeecccCCCCeEE
Q 030119 47 TIDMFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKFVPLRKPKKLPGKVISEEYILEYGRDCLEMHVGAVESAERAL 126 (182)
Q Consensus 47 l~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VL 126 (182)
+++++.+.+.+.+.++|++++.||+.+|..+|+.|++|+.+++|.++.++... ...+ .+++ +||+|+
T Consensus 151 l~~~i~~~~~~~~~~vVVspd~Ggv~~A~~lA~~L~~~~~~i~K~r~~~~~v~-----------~~~l-~g~v-~gk~vi 217 (326)
T 3s5j_B 151 VLKWIRENISEWRNCTIVSPDAGGAKRVTSIADRLNVDFALIHKERKKANEVD-----------RMVL-VGDV-KDRVAI 217 (326)
T ss_dssp HHHHHHHHCTTGGGCEEEESSGGGHHHHHHHHHHHTCEEEEEEEC-------C-----------CEEE-ESCC-TTSEEE
T ss_pred HHHHHHHhcCcCCCcEEEEECCCchHHHHHHHHHcCCCEEEEEEEecCCCeee-----------EEec-cccC-CCCEEE
Confidence 34444444433345799999999999999999999999999988764332210 1111 2566 899999
Q ss_pred EEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeecCchhhccccCCCeEEeee
Q 030119 127 VVDDLIATGGTLCAAINLLERVGAEVVECACVIELPDLKGRERLNGKPLYVLVE 180 (182)
Q Consensus 127 lVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~~~~~~~~l~~~~~~sl~~ 180 (182)
||||+++||+|+.++++.|++.|++.+.+++.|......+.+++.+.++..++.
T Consensus 218 IVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~tH~v~~~~a~e~l~~~~i~~vv~ 271 (326)
T 3s5j_B 218 LVDDMADTCGTICHAADKLLSAGATRVYAILTHGIFSGPAISRINNACFEAVVV 271 (326)
T ss_dssp EEEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECCCTTHHHHHHHSCCSEEEE
T ss_pred EEccccCCcHHHHHHHHHHHHcCCCEEEEEEEecccCchHHHHHhhCCCCEEEE
Confidence 999999999999999999999999999999999987777888887666665554
No 36
>1nul_A XPRT, xanthine-guanine phosphoribosyltransferase; purine salvage enzym; 1.80A {Escherichia coli} SCOP: c.61.1.1 PDB: 1a96_A* 1a95_A 1a98_A 1a97_A*
Probab=99.72 E-value=3.7e-17 Score=121.11 Aligned_cols=111 Identities=16% Similarity=0.224 Sum_probs=84.1
Q ss_pred cccCCHHHHHHHHHHHHHHhcC-CCCcEEEEeCCCchhhHHHHHHHhCCC-eeeeecCCCCCCcccchheeeccccceEE
Q 030119 36 TLLLKPKEFKDTIDMFVERYKG-KNISVVAGIEARGFIFGPPIALAIGAK-FVPLRKPKKLPGKVISEEYILEYGRDCLE 113 (182)
Q Consensus 36 ~l~~~~~~~~~l~~~la~~~~~-~~~d~Iv~v~~~G~~~a~~la~~l~~p-~~~~~k~~~~~~~~~~~~~~~~~~~~~~~ 113 (182)
.++.+++.++..+..|+.++.. .++|+|+|++.||+++|..+|+.|++| +.+++.... .. ++.+...
T Consensus 4 ~~l~~~~~i~~~~~~La~~i~~~~~~~~vvgi~~Gg~~~a~~la~~l~~~~~~~i~~~~y-~~----------~~~~~~~ 72 (152)
T 1nul_A 4 KYIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGALLARELGIRHVDTVCISSY-DH----------DNQRELK 72 (152)
T ss_dssp EEECCHHHHHHHHHHHHHHHCSGGGCSEEEEEETTTHHHHHHHHHHHTCCCEEEEEEEC-------------------CE
T ss_pred cEecCHHHHHHHHHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHcCCCcceEEEEEEe-cC----------cccceEE
Confidence 3567888999999999999875 357899999999999999999999999 655542211 10 0011122
Q ss_pred EeecccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeec
Q 030119 114 MHVGAVESAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELP 162 (182)
Q Consensus 114 ~~~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~ 162 (182)
+..+...+||+||||||+++||+|+.++++.|++ +.+++++++.
T Consensus 73 ~~~~~~~~gk~VliVDDii~TG~Tl~~a~~~l~~-----v~~a~L~~k~ 116 (152)
T 1nul_A 73 VLKRAEGDGEGFIVIDDLVDTGGTAVAIREMYPK-----AHFVTIFAKP 116 (152)
T ss_dssp EEECCSSCCTTEEEEEEEECTTSSHHHHHHHCTT-----SEEEEEEECG
T ss_pred EecCCCCCcCEEEEEEeecCchHHHHHHHHHHhh-----CCEEEEEECC
Confidence 2222123899999999999999999999999986 7889999986
No 37
>2ywu_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 2ywt_A* 2yws_A* 3acb_A 3acc_A* 3acd_A*
Probab=99.71 E-value=8.5e-17 Score=122.51 Aligned_cols=119 Identities=17% Similarity=0.173 Sum_probs=86.6
Q ss_pred ccCCHHHHHHHHHHHHHHhcC---CCCcEEEEeCCCchhhHHHHHHHhCCCee--eeecCCCCCCcccchheeeccccce
Q 030119 37 LLLKPKEFKDTIDMFVERYKG---KNISVVAGIEARGFIFGPPIALAIGAKFV--PLRKPKKLPGKVISEEYILEYGRDC 111 (182)
Q Consensus 37 l~~~~~~~~~l~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l~~p~~--~~~k~~~~~~~~~~~~~~~~~~~~~ 111 (182)
++.+++.++...+.|+.++.+ .++++|+|++.||+.+|..+|+.|++|+. +++..+....... .+..+
T Consensus 12 ~li~~~~i~~~i~~La~~I~~~~~~~~~vvVgi~~gg~~~a~~la~~L~~p~~~~~i~~~~y~~~~~~-------~~~v~ 84 (181)
T 2ywu_A 12 VQISAEAIKKRVEELGGEIARDYQGKTPHLICVLNGAFIFMADLVRAIPLPLTMDFIAISSYGNAFKS-------SGEVE 84 (181)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHTTTCCCEEEEEETTTHHHHHHHHTTCCSCCEEEEEEEC-------------------C
T ss_pred EEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEECchhHHHHHHHHHHcCCCceEEEEEEEEecCCccc-------cCcEE
Confidence 567888888777888777743 16789999999999999999999999864 3432211000000 00011
Q ss_pred EEEe-ecccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeecC
Q 030119 112 LEMH-VGAVESAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELPD 163 (182)
Q Consensus 112 ~~~~-~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~~ 163 (182)
+... ...+ +|++||||||+++||+|+.++++.|++.|++.+.++++++++.
T Consensus 85 i~~~~~~~~-~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~ 136 (181)
T 2ywu_A 85 LLKDLRLPI-HGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVRVAALLSKPS 136 (181)
T ss_dssp EEECCCSCC-TTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred EEecCCCCC-CCCEEEEECCeeCChHHHHHHHHHHHhcCCcEEEEEEEEECCC
Confidence 1111 1234 8999999999999999999999999999999999999998864
No 38
>3ohp_A Hypoxanthine phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Vibrio cholerae} SCOP: c.61.1.1 PDB: 1g9s_A* 1g9t_A* 1grv_A 1j7j_A
Probab=99.70 E-value=1.4e-16 Score=120.85 Aligned_cols=120 Identities=15% Similarity=0.202 Sum_probs=86.5
Q ss_pred cccCCHHHHHHHHHHHHHHhcCC---CC-cEEEEeCCCchhhHHHHHHHhCCCe--eeeecCCCCCCcccchheeecccc
Q 030119 36 TLLLKPKEFKDTIDMFVERYKGK---NI-SVVAGIEARGFIFGPPIALAIGAKF--VPLRKPKKLPGKVISEEYILEYGR 109 (182)
Q Consensus 36 ~l~~~~~~~~~l~~~la~~~~~~---~~-d~Iv~v~~~G~~~a~~la~~l~~p~--~~~~k~~~~~~~~~~~~~~~~~~~ 109 (182)
.++.+++.++.....|+.++... +. ++|+|++.||+++|..+++.|+.|+ .+++..+...+.. ..+.
T Consensus 6 ~~l~s~~~i~~~i~~La~~I~~~~~~~~~~vvVgi~~gG~~~a~~la~~L~~~~~~~~i~~~~y~~~~~-------~~~~ 78 (177)
T 3ohp_A 6 EVMISEQEVAQRIRELGQQITEHYQGSSDLVLVGLLRGSFVFMADLARQIHLTHQVDFMTASSYGNSMQ-------SSRD 78 (177)
T ss_dssp EEEECHHHHHHHHHHHHHHHHHHTTTCSCEEEEEETTTTHHHHHHHHHTCCSCCEEEEEEECC---------------CC
T ss_pred EEeeCHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECcchHHHHHHHHHHcCCCceEEEEEEEEEcCCCc-------cCCc
Confidence 45667778877778887776432 34 8999999999999999999999986 3344222101100 0011
Q ss_pred ceEEEe-ecccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeecC
Q 030119 110 DCLEMH-VGAVESAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELPD 163 (182)
Q Consensus 110 ~~~~~~-~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~~ 163 (182)
-++... ...+ +|++||||||+++||+|+.++++.|++.|++.+.++++++++.
T Consensus 79 v~i~~~~~~~~-~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~~~~ 132 (177)
T 3ohp_A 79 VRILKDLDDDI-KGKDVLLVEDIIDTGNTLNKVKEILALREPKSIRICTLLDKPT 132 (177)
T ss_dssp CCEEECCSSCC-TTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred EEEecCCCccc-CCCEEEEEeeEeCcHHHHHHHHHHHHhcCCcEEEEEEEEECCc
Confidence 111111 1234 8999999999999999999999999999999999999998863
No 39
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=99.70 E-value=5.6e-17 Score=133.24 Aligned_cols=109 Identities=20% Similarity=0.335 Sum_probs=81.8
Q ss_pred CCcEEEEeCCCchhhHHHHHHHhCCCeeeeecCCCCCCcccchheeeccccceEEEeecccCCCCeEEEEeCccCchHHH
Q 030119 59 NISVVAGIEARGFIFGPPIALAIGAKFVPLRKPKKLPGKVISEEYILEYGRDCLEMHVGAVESAERALVVDDLIATGGTL 138 (182)
Q Consensus 59 ~~d~Iv~v~~~G~~~a~~la~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLlVDDvitTG~Tl 138 (182)
+.++|++++.||+.+|..+|+.|++|+.+++|+++.++.. ..+.+ .+++ +||+|+||||+++||+|+
T Consensus 166 ~~~vVVspd~Ggv~~A~~lA~~L~~p~~~i~K~r~~~~~v-----------~~~~i-~g~v-~gk~viiVDDii~TG~Tl 232 (319)
T 3dah_A 166 PDLLVVSPDVGGVVRARALAKQLNCDLAIIDKRRPKANVA-----------EVMNI-IGEV-EGRTCVIMDDMVDTAGTL 232 (319)
T ss_dssp TTEEEECCSSTTHHHHHHHHHHTTCEEEC---------------------------------CCSEEEEEEEEESSCHHH
T ss_pred CCcEEEEeCCCccHHHHHHHHHhCCCEEEEEEEeccCCce-----------EEEEc-cccC-CCCEEEEEecccCchHHH
Confidence 5679999999999999999999999999988766432211 01111 2456 899999999999999999
Q ss_pred HHHHHHHHHcCCeEEEEEEEEeecCchhhccccCCCeEEeee
Q 030119 139 CAAINLLERVGAEVVECACVIELPDLKGRERLNGKPLYVLVE 180 (182)
Q Consensus 139 ~~~~~~L~~~Ga~~v~~~vl~~~~~~~~~~~l~~~~~~sl~~ 180 (182)
.++++.|++.|++.+.+++.|.....++.+++.+.++..++.
T Consensus 233 ~~a~~~L~~~Ga~~v~~~~tH~v~s~~a~~~l~~~~i~~vv~ 274 (319)
T 3dah_A 233 CKAAQVLKERGAKQVFAYATHPVLSGGAADRIAASALDELVV 274 (319)
T ss_dssp HHHHHHHHHTTCSCEEEEEEEECCCTTHHHHHHTSSCSEEEE
T ss_pred HHHHHHHHHcCCCEEEEEEEeecCChHHHHHHHhCCCCEEEE
Confidence 999999999999999999999987777889987666666654
No 40
>1ufr_A TT1027, PYR mRNA-binding attenuation protein; pyrimidine nucleotide biosynthesis, transcriptional attenuation, RNA-binding protein; 2.60A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.70 E-value=4.5e-17 Score=123.79 Aligned_cols=122 Identities=18% Similarity=0.166 Sum_probs=84.2
Q ss_pred cccCCHHHHHHHHHHHHHHhcC----CCCcEEEEeCCCchhhHHHHHHHhC----CCeee--eecCCCCCCcccchheee
Q 030119 36 TLLLKPKEFKDTIDMFVERYKG----KNISVVAGIEARGFIFGPPIALAIG----AKFVP--LRKPKKLPGKVISEEYIL 105 (182)
Q Consensus 36 ~l~~~~~~~~~l~~~la~~~~~----~~~d~Iv~v~~~G~~~a~~la~~l~----~p~~~--~~k~~~~~~~~~~~~~~~ 105 (182)
.++.+++.+......|+.++.. .+.++|+|++.||+++|..+|+.++ +|+.. +++........ ....
T Consensus 5 ~~l~~~~~i~~~~~~La~~i~~~~~~~~~~~iv~v~~rG~~~a~~la~~l~~~~~~~~~~~~l~~~~~~~~~~---~~~~ 81 (181)
T 1ufr_A 5 AELMNAPEMRRALYRIAHEIVEANKGTEGLALVGIHTRGIPLAHRIARFIAEFEGKEVPVGVLDITLYRDDLT---EIGY 81 (181)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHHHHTSSTTEEEEEETTTHHHHHHHHHHHHHHHHCSCCCEEEEEEEC-------------
T ss_pred eeecCHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCChHHHHHHHHHHhHHhCCCcccCeEEEEEecCccc---cccc
Confidence 3566777777777777776642 2567999999999999999999987 77642 33211100000 0000
Q ss_pred ccccceEEEeecccCCCCeEEEEeCccCchHHHHHHHHHHHHcC-CeEEEEEEEEeec
Q 030119 106 EYGRDCLEMHVGAVESAERALVVDDLIATGGTLCAAINLLERVG-AEVVECACVIELP 162 (182)
Q Consensus 106 ~~~~~~~~~~~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~G-a~~v~~~vl~~~~ 162 (182)
......+.+ ...+ +|++||||||++|||+|+.++++.|++.| ++.+.+++++++.
T Consensus 82 ~~~~~~~~~-~~~~-~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~~~l~~~~ 137 (181)
T 1ufr_A 82 RPQVRETRI-PFDL-TGKAIVLVDDVLYTGRTARAALDALIDLGRPRRIYLAVLVDRG 137 (181)
T ss_dssp -CEEEEEEE-CSCC-TTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred cceeccccc-CcCC-CCCEEEEEecCCCcHHHHHHHHHHHHhcCCCcEEEEEEEEcCC
Confidence 000011111 2344 89999999999999999999999999999 8999999999876
No 41
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.69 E-value=1.6e-16 Score=123.36 Aligned_cols=110 Identities=24% Similarity=0.348 Sum_probs=75.3
Q ss_pred CCcEEEEeCCCchhhHHHHHHHhCCCeee--eecCCCC------------CCccc-chh----eeecc------------
Q 030119 59 NISVVAGIEARGFIFGPPIALAIGAKFVP--LRKPKKL------------PGKVI-SEE----YILEY------------ 107 (182)
Q Consensus 59 ~~d~Iv~v~~~G~~~a~~la~~l~~p~~~--~~k~~~~------------~~~~~-~~~----~~~~~------------ 107 (182)
+.|+|+|+|+||+++|..+|+.|++|+.+ .++.+.. .+... ... ++..+
T Consensus 23 ~~~vVv~v~rGg~~~A~~la~~l~~p~~~~~~rk~~~~~~~e~~~ga~s~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 102 (208)
T 1wd5_A 23 EAPVVLGLPRGGVVVADEVARRLGGELDVVLVRKVGAPGNPEFALGAVGEGGELVLMPYALRYADQSYLEREAARQRDVL 102 (208)
T ss_dssp CSCEEEECTTHHHHHHHHHHHHHTCEEEECCEEEEEETTEEEEEEEEEETTCCEEECTTHHHHSCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHhCCCeEEEEEEEecCCCCchhhcceecCCCcEEechhhhcccCHHHHHHHHHHHHHHH
Confidence 67899999999999999999999999876 3433221 11000 000 00000
Q ss_pred cc--ceEE-Ee-ecccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeecCchhhcccc
Q 030119 108 GR--DCLE-MH-VGAVESAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELPDLKGRERLN 171 (182)
Q Consensus 108 ~~--~~~~-~~-~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~~~~~~~~l~ 171 (182)
.+ ..+. .. ...+ +||+||||||++|||+|+.++++.|++.|++.+.+++++.+. ++.+++.
T Consensus 103 ~~r~~~~~~~~~~~~~-~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~V~v~~~v~~~--~~~~~l~ 167 (208)
T 1wd5_A 103 RKRAERYRRVRPKAAR-KGRDVVLVDDGVATGASMEAALSVVFQEGPRRVVVAVPVASP--EAVERLK 167 (208)
T ss_dssp HHHHHHHHHHSCCCCC-TTSEEEEECSCBSSCHHHHHHHHHHHTTCCSEEEEEEEEBCH--HHHHHHH
T ss_pred HHHHHHhhccCCCCCC-CCCEEEEECCCccHHHHHHHHHHHHHHcCCCEEEEEEEEcCH--HHHHHhc
Confidence 00 0000 00 1234 899999999999999999999999999999999999988764 4556554
No 42
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=99.68 E-value=3.1e-16 Score=128.98 Aligned_cols=109 Identities=25% Similarity=0.352 Sum_probs=85.9
Q ss_pred CCcEEEEeCCCchhhHHHHHHHhCCCeeeeecCCCCCCcccchheeeccccceEEEeecccCCCCeEEEEeCccCchHHH
Q 030119 59 NISVVAGIEARGFIFGPPIALAIGAKFVPLRKPKKLPGKVISEEYILEYGRDCLEMHVGAVESAERALVVDDLIATGGTL 138 (182)
Q Consensus 59 ~~d~Iv~v~~~G~~~a~~la~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLlVDDvitTG~Tl 138 (182)
+.++|++++.||+.+|..+|+.+++|+.+++|.+..... ...+.+ .+.+ +||+||||||++|||+|+
T Consensus 167 ~~~vVv~pd~Gg~~~A~~la~~L~~p~~~l~k~r~~~~~-----------~~~~~l-~~~v-~gk~VlLVDDiitTG~Tl 233 (317)
T 1dku_A 167 EDIVIVSPDHGGVTRARKLADRLKAPIAIIDKRRPRPNV-----------AEVMNI-VGNI-EGKTAILIDDIIDTAGTI 233 (317)
T ss_dssp CSEEEEESSGGGHHHHHHHHHHTTCCEEEEECC--------------------CEE-ESCC-TTCEEEEECSEESSCHHH
T ss_pred CCcEEEEeCcchHHHHHHHHHHhCCCEEEEEEEeccccc-----------eeEEEe-cccC-CCCEEEEEecccCCCHHH
Confidence 567999999999999999999999999887765432110 011222 2456 899999999999999999
Q ss_pred HHHHHHHHHcCCeEEEEEEEEeecCchhhccccCCCeEEeee
Q 030119 139 CAAINLLERVGAEVVECACVIELPDLKGRERLNGKPLYVLVE 180 (182)
Q Consensus 139 ~~~~~~L~~~Ga~~v~~~vl~~~~~~~~~~~l~~~~~~sl~~ 180 (182)
.++++.|++.|++.+.+++.|......+.+++.+.++..++.
T Consensus 234 ~~aa~~Lk~~Ga~~V~~~~tH~v~~~~a~~~l~~~~i~~vv~ 275 (317)
T 1dku_A 234 TLAANALVENGAKEVYACCTHPVLSGPAVERINNSTIKELVV 275 (317)
T ss_dssp HHHHHHHHHTTCSEEEEECSEECCCTTHHHHHHTSSEEEEEE
T ss_pred HHHHHHHHHcCCcEEEEEEECcccChHHHHHHhhCCCCEEEE
Confidence 999999999999999999988777767788887666766654
No 43
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=99.68 E-value=2.3e-16 Score=132.57 Aligned_cols=133 Identities=15% Similarity=0.144 Sum_probs=89.3
Q ss_pred HHHHHHHHhcCCCCcEEEEeCCCchhhHHHHHHHhCCCeeeeecCCCCC------Ccc----cchheeeccccc------
Q 030119 47 TIDMFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKFVPLRKPKKLP------GKV----ISEEYILEYGRD------ 110 (182)
Q Consensus 47 l~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~~p~~~~~k~~~~~------~~~----~~~~~~~~~~~~------ 110 (182)
+++++.+.+.+.+.++|+|++.||+++|..+|+.|++|+.++++++... +.. ....+..+++..
T Consensus 179 La~~I~~~~~~~~~~vVV~pd~GGv~~A~~lA~~L~~pl~ii~k~r~~~~~e~~~gr~~~~~v~~~~~~~~g~~i~~~~~ 258 (379)
T 2ji4_A 179 LLQYIQEEIPDYRNAVIVAKSPASAKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHPSLEIPMLIP 258 (379)
T ss_dssp HHHHHHHHSTTGGGEEEEESSGGGHHHHHHHHHHTTCEEEEEC-------------------------------------
T ss_pred HHHHHHHhcccCCCcEEEEEccchHHHHHHHHHHhCCCEEEEEEEeecccccccccccCCcccccccccccccchhhhhh
Confidence 3444444443335679999999999999999999999999887654310 000 000000000000
Q ss_pred e--EEEe-ecccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeecCchhhccccCCCeEEeee
Q 030119 111 C--LEMH-VGAVESAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELPDLKGRERLNGKPLYVLVE 180 (182)
Q Consensus 111 ~--~~~~-~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~~~~~~~~l~~~~~~sl~~ 180 (182)
. ..+. .+++ +||+||||||+++||+|+.++++.|++.|++.+.+++.|......+.+++++.++..++.
T Consensus 259 ~~~~~~~l~g~v-~Gk~viiVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~tH~v~s~~a~~~l~~s~id~vvv 330 (379)
T 2ji4_A 259 KEKPPITVVGDV-GGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPRRIEESAIDEVVV 330 (379)
T ss_dssp ----CCCEESCC-TTSEEEEEEEEECSCHHHHHHHHHHHHTTCCEEEEEEEEECCCTTHHHHHHHSSCCEEEE
T ss_pred hcccccccccCC-CCCEEEEEecCCCchHHHHHHHHHHHhcCCCEEEEEEEeecCCcHHHHHHHhCCCCEEEE
Confidence 0 0001 2445 999999999999999999999999999999999999999987777888887555555543
No 44
>1w30_A PYRR bifunctional protein; transferase, glycosyltransferase, PSI, protein structure initiative, TB structural genomics consortium, TB; 1.9A {Mycobacterium tuberculosis} SCOP: c.61.1.1
Probab=99.67 E-value=2.4e-16 Score=121.91 Aligned_cols=123 Identities=18% Similarity=0.200 Sum_probs=84.6
Q ss_pred ccccCCHHHHHHHHHHHHHHhcC-----------CCCcEEEEeCCCchhhHHHHHHHh----CCCeee--eecCCCCCCc
Q 030119 35 TTLLLKPKEFKDTIDMFVERYKG-----------KNISVVAGIEARGFIFGPPIALAI----GAKFVP--LRKPKKLPGK 97 (182)
Q Consensus 35 ~~l~~~~~~~~~l~~~la~~~~~-----------~~~d~Iv~v~~~G~~~a~~la~~l----~~p~~~--~~k~~~~~~~ 97 (182)
..++.+++.++.....|+..+.+ .+.++|+|++.||+++|..||+.| ++|+.. +.........
T Consensus 13 ~~~l~~~~~i~~~i~~La~~i~~~~~~~~~~~~~~~~~vvvgi~~gG~~~a~~La~~L~~~~g~p~~~~~l~~~~y~~~~ 92 (201)
T 1w30_A 13 SRELMSAANVGRTISRIAHQIIEKTALDDPVGPDAPRVVLLGIPTRGVTLANRLAGNITEYSGIHVGHGALDITLYRDDL 92 (201)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHTTTTSCCBTTBCCEEEEECTTHHHHHHHHHHHHHHHHHSCCCEEEECCCGGGCC--
T ss_pred ceEEeCHHHHHHHHHHHHHHHHHHccccccccccCCCcEEEEEcccHHHHHHHHHHHHhHHHCCCcccceEEEEEecCCc
Confidence 34677888888777877776532 256799999999999999999999 466432 2211100000
Q ss_pred ccchheeeccccceEEEeecccCCCCeEEEEeCccCchHHHHHHHHHHHHcC-CeEEEEEEEEeec
Q 030119 98 VISEEYILEYGRDCLEMHVGAVESAERALVVDDLIATGGTLCAAINLLERVG-AEVVECACVIELP 162 (182)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~G-a~~v~~~vl~~~~ 162 (182)
. .........+.+ .....+|++|||||||+|||+|+.++++.|++.| ++.+.+++++++.
T Consensus 93 ~----~~~~~~~~~~~~-~~~~~~gk~VlLVDDVitTG~Tl~aa~~~L~~~G~a~~V~vavlv~k~ 153 (201)
T 1w30_A 93 M----IKPPRPLASTSI-PAGGIDDALVILVDDVLYSGRSVRSALDALRDVGRPRAVQLAVLVDRG 153 (201)
T ss_dssp ----------CCCCCBC-CTTCSTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred c----ccccceeecccC-CCccCCCCEEEEECCccchHHHHHHHHHHHHhCCCCcEEEEEEEEecC
Confidence 0 000000001111 1121389999999999999999999999999999 9999999999885
No 45
>2xbu_A Hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage, FLIP pepti; HET: 5GP; 1.80A {Saccharomyces cerevisiae} PDB: 2jkz_A* 2jky_A*
Probab=99.66 E-value=6.2e-16 Score=121.20 Aligned_cols=127 Identities=16% Similarity=0.155 Sum_probs=88.4
Q ss_pred ccccCCHHHHHHHHHHHHHHhcCCCCcEEEEeCCCchhhHHHHHHHhCC------CeeeeecCCCCCCcccchheeeccc
Q 030119 35 TTLLLKPKEFKDTIDMFVERYKGKNISVVAGIEARGFIFGPPIALAIGA------KFVPLRKPKKLPGKVISEEYILEYG 108 (182)
Q Consensus 35 ~~l~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~~------p~~~~~k~~~~~~~~~~~~~~~~~~ 108 (182)
..++.+.+.++..+..|+.++.+.++++|+|++.||+++|..||+.|+. |+.++.............. ....+
T Consensus 5 ~~~~is~~~i~~~i~~LA~~I~~~~~~vIVgI~~GG~~~A~~La~~L~~~~~~~lpi~~i~~s~y~~~~~~~~~-~~~~g 83 (221)
T 2xbu_A 5 DKQYISYNNVHQLCQVSAERIKNFKPDLIIAIGGGGFIPARILRTFLKEPGVPTIRIFAIILSLYEDLNSVGSE-VEEVG 83 (221)
T ss_dssp CCEECCHHHHHHHHHHHHHHHTTTCCSEEEEEHHHHHHHHHHHHHHHCCTTSCCCEEEEEEEEEEC--------------
T ss_pred ceEecCHHHHHHHHHHHHHHhccCCCCEEEEECCCcHHHHHHHHHHhCCCCCCCccEEEEEEEEecCCcccccc-ccccC
Confidence 3467788889999999999995557899999999999999999999998 4444431110000000000 00001
Q ss_pred cceEE---Ee----ecccCCCCeEEEEeCccCchHHHHHHHHHHHH--------cCC---------eEEEEEEEEeecC
Q 030119 109 RDCLE---MH----VGAVESAERALVVDDLIATGGTLCAAINLLER--------VGA---------EVVECACVIELPD 163 (182)
Q Consensus 109 ~~~~~---~~----~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~--------~Ga---------~~v~~~vl~~~~~ 163 (182)
...+. +. ...+ +||+||||||+++||+|+.++++.|++ .|+ +.+.++|++++..
T Consensus 84 ~~~~~~~~~~~~~~~~~v-~Gk~VLIVDDIidTG~Tl~aa~~~L~~~ga~~~~~~g~~~~~~~~~~~~v~iavL~~K~~ 161 (221)
T 2xbu_A 84 VKVSRTQWIDYEQCKLDL-VGKNVLIVDEVDDTRTTLHYALSELEKDAAEQAKAKGIDTEKSPEMKTNFGIFVLHDKQK 161 (221)
T ss_dssp CEEEEEECCCHHHHTCCC-TTCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHTTCCTTTCGGGSCEEEEEEEEEECS
T ss_pred ceeeeeeeeecccccccC-CCCEEEEEeccCCcHHHHHHHHHHHHhhcchhhhhcCccccccccCcceEEEEEEEeccc
Confidence 11110 11 1234 899999999999999999999999997 786 5899999999874
No 46
>3acd_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 3acc_A* 3acb_A*
Probab=99.61 E-value=5.1e-15 Score=112.65 Aligned_cols=122 Identities=16% Similarity=0.195 Sum_probs=86.5
Q ss_pred cccccCCHHHHHHHHHHHHHHhcCC---CCcEEEEeCCCchhhHHHHHHHhCCCeee--eecCCCCCCcccchheeeccc
Q 030119 34 ITTLLLKPKEFKDTIDMFVERYKGK---NISVVAGIEARGFIFGPPIALAIGAKFVP--LRKPKKLPGKVISEEYILEYG 108 (182)
Q Consensus 34 ~~~l~~~~~~~~~l~~~la~~~~~~---~~d~Iv~v~~~G~~~a~~la~~l~~p~~~--~~k~~~~~~~~~~~~~~~~~~ 108 (182)
...++.+.+.++.....||.++.+. +..+++|+..||+.+|..|++.++.|... +.-.+ +.+... ..+
T Consensus 9 ~~~vlis~~~I~~~i~rlA~eI~e~~~~~~~vlvgIl~Gg~~fa~~L~~~l~~~~~~~~i~~ss-y~~~~~------~~g 81 (181)
T 3acd_A 9 NGPVQISAEAIKKRVEELGGEIARDYQGKTPHLICVLNGAFIFMADLVRAIPLPLTMDFIAISS-YGNAFK------SSG 81 (181)
T ss_dssp SSSCCBCHHHHHHHHHHHHHHHHHHTTTCCCEEEEEETTTHHHHHHHHTTCCSCCEEEEEEEC-----------------
T ss_pred CccEEeCHHHHHHHHHHHHHHHHHHhCCCCcEEEEEecCcHHHHHHHHHhcCCCccccceEEEE-ecCCcC------CCC
Confidence 3456778888877777777766321 55689999999999999999999988644 22111 111110 001
Q ss_pred cceEEEe-ecccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeecC
Q 030119 109 RDCLEMH-VGAVESAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELPD 163 (182)
Q Consensus 109 ~~~~~~~-~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~~ 163 (182)
....... ...+ .||+|||||||++||.|+.++.+.|.+.|++.+.++|+++++.
T Consensus 82 ~~~~~~~~~~~i-~gk~VllVDDIldTG~Tl~~~~~~l~~~~p~sv~~avLl~K~~ 136 (181)
T 3acd_A 82 EVELLKDLRLPI-HGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVRVAALLSKPS 136 (181)
T ss_dssp --CEEECCCSCC-TTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred ceEeccCCCccc-CCCeeEEEEEEEcCchhHHHHHHHHhcCCCCEEEEEEEEEcCc
Confidence 1111111 1234 8999999999999999999999999999999999999999763
No 47
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*
Probab=99.58 E-value=1.1e-14 Score=126.59 Aligned_cols=114 Identities=21% Similarity=0.196 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHh----cCCCCcEEEEeCCCchhhHHHHHHHhCCCeee-eecCCCCCCccc-ch--heeeccccceEEEe
Q 030119 44 FKDTIDMFVERY----KGKNISVVAGIEARGFIFGPPIALAIGAKFVP-LRKPKKLPGKVI-SE--EYILEYGRDCLEMH 115 (182)
Q Consensus 44 ~~~l~~~la~~~----~~~~~d~Iv~v~~~G~~~a~~la~~l~~p~~~-~~k~~~~~~~~~-~~--~~~~~~~~~~~~~~ 115 (182)
...+++.|++++ .+.++|+|+++|.+|+++|..+|+.+++|+.. ..+.+. .+.+. .. ..+...-...+...
T Consensus 275 r~~lg~~La~~i~~~~~~~~~dvVv~vP~~g~~~A~~la~~lg~p~~~~~~k~r~-~~~t~i~~~~~~R~~~v~~~~~~~ 353 (504)
T 1ecf_A 275 RVNMGTKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRY-VGRTFIMPGQQLRRKSVRRKLNAN 353 (504)
T ss_dssp HHHHHHHHHHHHHHHTTTCCCCEEEECTTTTHHHHHHHHHHHTCCBCCCEEECSC-CCCCCCCSSSCCCCCCSTTTEEEC
T ss_pred HHHHHHHHHHHHHHHcCCCCCeEEEEECCcHHHHHHHHHHHhCCCceeeEEEecc-cCCceeCccHHHHHHHHHhhhccc
Confidence 334455555544 33468999999999999999999999999873 222221 11111 00 00000001123322
Q ss_pred ecccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEE
Q 030119 116 VGAVESAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVI 159 (182)
Q Consensus 116 ~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~ 159 (182)
...+ +||+||||||++|||+|+.++++.|+++||+.|.+++++
T Consensus 354 ~~~v-~Gk~VllVDDii~TG~Tl~~~~~~L~~~Ga~~V~~~~l~ 396 (504)
T 1ecf_A 354 RAEF-RDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAA 396 (504)
T ss_dssp GGGT-TTCCEEEEESCCSSSHHHHHHHHHHHHTTCSSEEEEESS
T ss_pred cccC-CCCeEEEEeccccccHHHHHHHHHHHhcCCcEEEEEEEe
Confidence 3345 899999999999999999999999999999999999986
No 48
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=99.53 E-value=4.6e-14 Score=121.34 Aligned_cols=115 Identities=23% Similarity=0.194 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHhcCCCCcEEEEeCCCchhhHHHHHHHhCCCeee-eecCCCCCCcc--cchheeeccccceEEEeeccc
Q 030119 43 EFKDTIDMFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKFVP-LRKPKKLPGKV--ISEEYILEYGRDCLEMHVGAV 119 (182)
Q Consensus 43 ~~~~l~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~~p~~~-~~k~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 119 (182)
....+++.|++.+. .+.|+|+++|.+|..+|..+|+.+++|+.. +.+.+....+. .+...+.......+......+
T Consensus 258 ~r~~lg~~La~~~~-~~~DvVV~VP~~g~~~A~~la~~lg~p~~~~l~k~r~~~~~~~~~~~~~R~~~~~~~~~~~~~~v 336 (459)
T 1ao0_A 258 ARKNLGKMLAQESA-VEADVVTGVPDSSISAAIGYAEATGIPYELGLIKNRYVGRTFIQPSQALREQGVRMKLSAVRGVV 336 (459)
T ss_dssp HHHHHHHHHHHHHC-CCCSEEECCTTTTHHHHHHHHHHHCCCBCCCEEECTTCCTTSCCCCHHHHHHTCCSSEEECHHHH
T ss_pred HHHHHHHHHHHhcc-cCCcEEEEECCcHHHHHHHHHHHhCCCCceeEEEecCCCccccCCCHHHHHhhhhhhcccccccC
Confidence 55677888887764 368999999999999999999999999874 33332111111 000000001112233222345
Q ss_pred CCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEE
Q 030119 120 ESAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVI 159 (182)
Q Consensus 120 ~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~ 159 (182)
+||+||||||++|||+|+.++++.|+++||+.|.+++++
T Consensus 337 -~gk~VlLVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~ 375 (459)
T 1ao0_A 337 -EGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVKISS 375 (459)
T ss_dssp -TTCEEEEEESCCSSSHHHHHHHHHHHHTTCSEEEEEESS
T ss_pred -CCCeEEEEeeeecCHHHHHHHHHHHHHcCCCEEEEEEec
Confidence 899999999999999999999999999999999999853
No 49
>1dqn_A Guanine phosphoribosyltransferase; protein-inhibitor complex, Mg IONS, pyrophosphate, transition state analogue; HET: IMU; 1.75A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1dqp_A*
Probab=99.47 E-value=4.5e-14 Score=111.11 Aligned_cols=112 Identities=8% Similarity=0.156 Sum_probs=80.8
Q ss_pred ccccCCHHHHHHHHHHHHHHhcC---C--CCcEEEEeCCCchhhHHHHHHHhCCCeee--eecCCCCCCcccchheeecc
Q 030119 35 TTLLLKPKEFKDTIDMFVERYKG---K--NISVVAGIEARGFIFGPPIALAIGAKFVP--LRKPKKLPGKVISEEYILEY 107 (182)
Q Consensus 35 ~~l~~~~~~~~~l~~~la~~~~~---~--~~d~Iv~v~~~G~~~a~~la~~l~~p~~~--~~k~~~~~~~~~~~~~~~~~ 107 (182)
..++.+++.+...+..|+.++.+ . +.++|+|++.||+++|..|++.|+.|+.. ++..+ +.+..
T Consensus 32 ~~vlis~~~I~~~i~~LA~~I~~~~~~~~~~~vvVgi~~Gg~~~a~~La~~L~~p~~v~~i~vs~-y~~~~--------- 101 (230)
T 1dqn_A 32 FHLLATFEECKALAADTARRMNEYYKDVAEPVTLVALLTGAYLYASLLTVHLTFPYTLHFVKVSS-YKGTR--------- 101 (230)
T ss_dssp CEEEECHHHHHHHHHHHHHHHHHHHTTCSSCEEEEEETTTHHHHHHHHHTTCCSCEEEEEECCEE-EECSS---------
T ss_pred ccEecCHHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCCHHHHHHHHHHhCCCceEEEEEEEE-eCCCc---------
Confidence 34566777777777777776642 2 56799999999999999999999999753 22111 10000
Q ss_pred ccceEEE-e---ecccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeecC
Q 030119 108 GRDCLEM-H---VGAVESAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELPD 163 (182)
Q Consensus 108 ~~~~~~~-~---~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~~ 163 (182)
..+ ..+ . ...+ +||+||||||+++||.|+.++++.|++ +.++++++++.
T Consensus 102 s~~-v~i~~~~l~~~v-~Gk~VLIVDDIidTG~Tl~~a~~~L~~-----V~vavLl~k~~ 154 (230)
T 1dqn_A 102 QES-VVFDEEDLKQLK-EKREVVLIDEYVDSGHTIFSIQEQIKH-----AKICSCFVKDV 154 (230)
T ss_dssp CEE-EECCHHHHHHHH-HCSSEEEEEEEESSSHHHHHHHHHSTT-----CEEEEEEESCH
T ss_pred cCc-eEEEeccCccCC-CCCEEEEEeeEcChHHHHHHHHHHhhc-----CEEEEEEECCc
Confidence 001 222 1 1245 899999999999999999999999988 77888998763
No 50
>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1
Probab=99.16 E-value=1.1e-10 Score=90.48 Aligned_cols=98 Identities=24% Similarity=0.303 Sum_probs=70.8
Q ss_pred CcEEEEeCCCchhhHHHHHHHh-CCCeeeeecCCCCCCcccchheeeccccceE-EEe-ecccCCCCeEEEEeCccCchH
Q 030119 60 ISVVAGIEARGFIFGPPIALAI-GAKFVPLRKPKKLPGKVISEEYILEYGRDCL-EMH-VGAVESAERALVVDDLIATGG 136 (182)
Q Consensus 60 ~d~Iv~v~~~G~~~a~~la~~l-~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~gk~VLlVDDvitTG~ 136 (182)
..+++++.++|++++..+.+.+ +.++..+...+.. .+ .+... ... +.++ +|++||||||+++||+
T Consensus 71 ~~~vV~Ilr~G~~~~~~L~~~l~~~~~~~i~~~r~~--~t---------~~~~~~~~~lp~~i-~~~~VllvDd~l~TG~ 138 (209)
T 1i5e_A 71 KLGVIPILRAGIGMVDGILKLIPAAKVGHIGLYRDP--QT---------LKPVEYYVKLPSDV-EERDFIIVDPMLATGG 138 (209)
T ss_dssp CEEEEEBTTGGGGGHHHHHHHCTTSEECEEEEECCT--TC---------SSCEEEEEECCTTT-TTSEEEEECSEESSSH
T ss_pred ceEEEEEecCChHHHHHHHHhCCCCeEEEEEEEEcC--CC---------CceEEEEEcCCCcc-CCCEEEEEcCCCcCHH
Confidence 4588999999999999999988 4455444332211 00 11111 112 2455 8999999999999999
Q ss_pred HHHHHHHHHHHcCCeEEEEEEEEeecCchhhcccc
Q 030119 137 TLCAAINLLERVGAEVVECACVIELPDLKGRERLN 171 (182)
Q Consensus 137 Tl~~~~~~L~~~Ga~~v~~~vl~~~~~~~~~~~l~ 171 (182)
|+.++++.|++.|++.+.+++++..+ ++.+++.
T Consensus 139 T~~~a~~~L~~~G~~~I~~~~lv~~~--~g~~~l~ 171 (209)
T 1i5e_A 139 SAVAAIDALKKRGAKSIKFMCLIAAP--EGVKAVE 171 (209)
T ss_dssp HHHHHHHHHHHTTCCCEEEECSEECH--HHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEEEEEECH--HHHHHHH
Confidence 99999999999999989888887543 5666664
No 51
>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomic PSI, protein structure initiative, joint center for structu genomics; HET: U5P; 2.30A {Thermotoga maritima} SCOP: c.61.1.1
Probab=99.14 E-value=1.4e-10 Score=90.48 Aligned_cols=96 Identities=20% Similarity=0.243 Sum_probs=71.5
Q ss_pred EEEEeCCCchhhHHHHHHHh-CCCeeeeecCCCCCCcccchheeeccccceE-EEe-ecccCCCCeEEEEeCccCchHHH
Q 030119 62 VVAGIEARGFIFGPPIALAI-GAKFVPLRKPKKLPGKVISEEYILEYGRDCL-EMH-VGAVESAERALVVDDLIATGGTL 138 (182)
Q Consensus 62 ~Iv~v~~~G~~~a~~la~~l-~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~gk~VLlVDDvitTG~Tl 138 (182)
++|++.++|+.++..+++.+ +.++.++...+... + ++... ... +.++ +|++|+||||+++||+|+
T Consensus 85 viV~IlrgG~~~~~~l~~~lp~a~vg~I~~~Rd~~--t---------~~~~~~~~~lp~di-~gr~VilvDd~laTG~Tl 152 (221)
T 1o5o_A 85 VVVPILRAGLVMADGILELLPNASVGHIGIYRDPE--T---------LQAVEYYAKLPPLN-DDKEVFLLDPMLATGVSS 152 (221)
T ss_dssp EEEEEETTHHHHHHHHHHHSTTCEECEEEEEECTT--T---------CCEEEEEEECCCCC-TTCEEEEECSEESSSHHH
T ss_pred EEEEEecchHHHHHHHHHhCCCCcEEEEEEEEcCC--C---------CceeEEEecCCCcc-CCCEEEEECCccccHHHH
Confidence 78999999999999999999 55555544332110 0 01111 111 2456 899999999999999999
Q ss_pred HHHHHHHHHcCCeEEEEEEEEeecCchhhcccc
Q 030119 139 CAAINLLERVGAEVVECACVIELPDLKGRERLN 171 (182)
Q Consensus 139 ~~~~~~L~~~Ga~~v~~~vl~~~~~~~~~~~l~ 171 (182)
.++++.|++.|++.+.+++++..+ ++.+++.
T Consensus 153 ~~ai~~L~~~G~~~I~~~~lv~~~--~g~~~l~ 183 (221)
T 1o5o_A 153 IKAIEILKENGAKKITLVALIAAP--EGVEAVE 183 (221)
T ss_dssp HHHHHHHHHTTCCEEEEECSEECH--HHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEEEEeCH--HHHHHHH
Confidence 999999999999999999888654 5677764
No 52
>2ehj_A Uracil phosphoribosyltransferase; structural genomics; 2.80A {Escherichia coli}
Probab=99.00 E-value=1.8e-09 Score=83.51 Aligned_cols=97 Identities=22% Similarity=0.328 Sum_probs=69.2
Q ss_pred cEEEEeCCCchhhHHHHHHHhC-CCeeeeecCCCCCCcccchheeeccccceEEE-e-ecccCCCCeEEEEeCccCchHH
Q 030119 61 SVVAGIEARGFIFGPPIALAIG-AKFVPLRKPKKLPGKVISEEYILEYGRDCLEM-H-VGAVESAERALVVDDLIATGGT 137 (182)
Q Consensus 61 d~Iv~v~~~G~~~a~~la~~l~-~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~gk~VLlVDDvitTG~T 137 (182)
-++|++.++|+.++..+.+.+. .++-++.-.+. + . .++...+. . +.++ +|++|+||||+++||+|
T Consensus 71 l~~V~ILraG~~~~~~l~~~ip~~~vg~i~~~rd-~-~---------t~~~~~~~~~lp~di-~~r~VilvDd~laTG~T 138 (208)
T 2ehj_A 71 ITVVPILRAGLGMMDGVLENVPSARISVVGMYRN-E-E---------TLEPVPYFQKLVSNI-DERMALIVDPMLATGGS 138 (208)
T ss_dssp CEEEEBTTGGGGGHHHHHHHCTTCEECEEEEEEC-T-T---------TCCEEEEEEECCSCG-GGCEEEEEEEEESSCHH
T ss_pred eEEEEeecCHHHHHHHHHHhCCcCceeEEEEEEc-C-C---------CCceEEEecCCCCcc-CCCEEEEECCccccHHH
Confidence 3889999999999999999885 22222211110 0 0 01111111 1 2456 89999999999999999
Q ss_pred HHHHHHHHHHcCCeEEEEEEEEeecCchhhcccc
Q 030119 138 LCAAINLLERVGAEVVECACVIELPDLKGRERLN 171 (182)
Q Consensus 138 l~~~~~~L~~~Ga~~v~~~vl~~~~~~~~~~~l~ 171 (182)
+.++++.|++.|++.+.+++++..+ ++.+++.
T Consensus 139 ~~~ai~~L~~~G~~~I~~~~lv~~p--~g~~~l~ 170 (208)
T 2ehj_A 139 VIATIDLLKKAGCSSIKVLVLVAAP--EGIAALE 170 (208)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEEECH--HHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEEEEeCH--HHHHHHH
Confidence 9999999999999999999998654 4666663
No 53
>2e55_A Uracil phosphoribosyltransferase; structural genomics; 2.15A {Aquifex aeolicus}
Probab=99.00 E-value=1.6e-09 Score=83.85 Aligned_cols=96 Identities=21% Similarity=0.249 Sum_probs=68.8
Q ss_pred EEEEeCCCchhhHHHHHHHhC-CCeeeeecCCCCCCcccchheeeccccceE-EEeecccCCCCeEEEEeCccCchHHHH
Q 030119 62 VVAGIEARGFIFGPPIALAIG-AKFVPLRKPKKLPGKVISEEYILEYGRDCL-EMHVGAVESAERALVVDDLIATGGTLC 139 (182)
Q Consensus 62 ~Iv~v~~~G~~~a~~la~~l~-~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gk~VLlVDDvitTG~Tl~ 139 (182)
++|++.++|+.++..+.+.+. .++-++.-.+. + . .++... .....++ +|++|+||||+++||+|+.
T Consensus 71 ~~V~ILraG~~~~~~l~~~lp~~~vg~i~~~rd-~-~---------t~~~~~~~~~lpdi-~~r~vilvDd~laTG~T~~ 138 (208)
T 2e55_A 71 VFVPILRAGLSFLEGALQVVPNAKVGFLGIKRN-E-E---------TLESHIYYSRLPEL-KGKIVVILDPMLATGGTLE 138 (208)
T ss_dssp EEEEEETTTHHHHHHHHHHSTTCEECEEEEEEC-T-T---------TCCEEEEEEECCCC-BTSEEEEECSEESSSHHHH
T ss_pred EEEEEecchHHHHHHHHHhCCCCcEEEEEEEEe-c-C---------CCceEEEecCCCCC-CCCEEEEECCccccHHHHH
Confidence 788999999999999999985 22222211110 0 0 011112 1121255 8999999999999999999
Q ss_pred HHHHHHHHcCCeEEEEEEEEeecCchhhcccc
Q 030119 140 AAINLLERVGAEVVECACVIELPDLKGRERLN 171 (182)
Q Consensus 140 ~~~~~L~~~Ga~~v~~~vl~~~~~~~~~~~l~ 171 (182)
++++.|++.|++.+.+++++..+ ++.+++.
T Consensus 139 ~ai~~L~~~G~~~I~~~~lv~~~--~g~~~l~ 168 (208)
T 2e55_A 139 VALREILKHSPLKVKSVHAIAAP--EGLKRIE 168 (208)
T ss_dssp HHHHHHHTTCBSEEEEEEEEECH--HHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEEEEECH--HHHHHHH
Confidence 99999999999999999998654 5666664
No 54
>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics, RI structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: c.61.1.1
Probab=98.93 E-value=1.8e-09 Score=83.55 Aligned_cols=97 Identities=23% Similarity=0.356 Sum_probs=68.2
Q ss_pred cEEEEeCCCchhhHHHHHHHhC-CCeeeeecCCCCCCcccchheeeccccceE-EEe-ecccCCCCeEEEEeCccCchHH
Q 030119 61 SVVAGIEARGFIFGPPIALAIG-AKFVPLRKPKKLPGKVISEEYILEYGRDCL-EMH-VGAVESAERALVVDDLIATGGT 137 (182)
Q Consensus 61 d~Iv~v~~~G~~~a~~la~~l~-~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~gk~VLlVDDvitTG~T 137 (182)
-++|++.++|+.++..+.+.+. .++-++.-.+. + .+ ++... ... +.++ +|++|+||||+++||+|
T Consensus 71 l~~V~ILraG~~~~~~l~~~ip~~~vg~I~~~rd-~-~t---------~~~~~~~~~lp~di-~~r~vilvDd~laTG~T 138 (208)
T 1v9s_A 71 LALVAILRAGLVMVEGILKLVPHARVGHIGLYRD-P-ES---------LNPVQYYIKLPPDI-AERRAFLLDPMLATGGS 138 (208)
T ss_dssp CEEEEETTTHHHHHHHHHTTCTTCEEEEEEEC--------------------CEEEECCSCG-GGSCEEEECSEESSSHH
T ss_pred eEEEEeccchHHHHHHHHHhCCCCeeeEEEEEEc-C-CC---------CCceEEeccCCCcc-CCCEEEEECCccccHHH
Confidence 3889999999999999998875 22322222111 0 00 11111 111 2456 89999999999999999
Q ss_pred HHHHHHHHHHcCCeEEEEEEEEeecCchhhcccc
Q 030119 138 LCAAINLLERVGAEVVECACVIELPDLKGRERLN 171 (182)
Q Consensus 138 l~~~~~~L~~~Ga~~v~~~vl~~~~~~~~~~~l~ 171 (182)
+.++++.|++.|++.+.+++++..+ ++.+++.
T Consensus 139 ~~~ai~~L~~~G~~~I~~~~lv~~~--~g~~~l~ 170 (208)
T 1v9s_A 139 ASLALSLLKERGATGVKLMAILAAP--EGLERIA 170 (208)
T ss_dssp HHHHHHHHHHTTCCSCEEEEEEECH--HHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEEEEeCH--HHHHHHH
Confidence 9999999999999989999998654 5676664
No 55
>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1bd4_D 1jlr_A* 1jls_B* 1upf_D 1upu_D*
Probab=98.88 E-value=7.4e-09 Score=81.84 Aligned_cols=96 Identities=19% Similarity=0.288 Sum_probs=68.2
Q ss_pred EEEEeCCCchhhHHHHHHHhC-CCeeeeecCCCCCCcccchheeeccccceEE-Ee-ecccCCCCeEEEEeCccCchHHH
Q 030119 62 VVAGIEARGFIFGPPIALAIG-AKFVPLRKPKKLPGKVISEEYILEYGRDCLE-MH-VGAVESAERALVVDDLIATGGTL 138 (182)
Q Consensus 62 ~Iv~v~~~G~~~a~~la~~l~-~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~gk~VLlVDDvitTG~Tl 138 (182)
++|++.++|+.++..+.+.+. .++-++.-.+. + .+ ++..++ .. +.++ +|++|+||||+++||+|+
T Consensus 105 ~~V~ILRaG~~m~~~l~~~ip~a~vg~I~~~Rd-~-~t---------~~~~~~~~~lp~di-~~r~VilvDdmlaTG~T~ 172 (243)
T 1bd3_D 105 CGVSIVRAGESMESGLRAVCRGVRIGKILIQRD-E-TT---------AEPKLIYEKLPADI-RERWVMLLDPMCATAGSV 172 (243)
T ss_dssp EEEEEETTTHHHHHHHHHHSTTCCEEEEEEEEC-S-SS---------CCEEEEEEECCTTG-GGSEEEEECSEESSCHHH
T ss_pred EEEEEEcchHHHHHHHHHhCCcCeeeeEEEEEc-C-CC---------CCeEEEeccCCccc-CCCEEEEECCccccHHHH
Confidence 688899999999999999885 33333221110 0 00 111121 11 2455 889999999999999999
Q ss_pred HHHHHHHHHcCC--eEEEEEEEEeecCchhhcccc
Q 030119 139 CAAINLLERVGA--EVVECACVIELPDLKGRERLN 171 (182)
Q Consensus 139 ~~~~~~L~~~Ga--~~v~~~vl~~~~~~~~~~~l~ 171 (182)
.++++.|++.|+ +.+.+++++..+ ++.+++.
T Consensus 173 ~~ai~~L~~~G~~p~~I~~~~lvaap--~g~~~l~ 205 (243)
T 1bd3_D 173 CKAIEVLLRLGVKEERIIFVNILAAP--QGIERVF 205 (243)
T ss_dssp HHHHHHHHHHTCCGGGEEEEEEEECH--HHHHHHH
T ss_pred HHHHHHHHHcCCCcceEEEEEEEeCH--HHHHHHH
Confidence 999999999999 888888888654 5666664
No 56
>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} SCOP: c.61.1.1
Probab=98.68 E-value=5e-08 Score=75.87 Aligned_cols=96 Identities=16% Similarity=0.175 Sum_probs=66.8
Q ss_pred EEEEeCCCchhhHHHHHHHhC-CCeeeeecCCCCCCcccchheeeccccceEEEeecccCCCCeEEEEeCccCchHHHHH
Q 030119 62 VVAGIEARGFIFGPPIALAIG-AKFVPLRKPKKLPGKVISEEYILEYGRDCLEMHVGAVESAERALVVDDLIATGGTLCA 140 (182)
Q Consensus 62 ~Iv~v~~~G~~~a~~la~~l~-~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLlVDDvitTG~Tl~~ 140 (182)
++|++.++|.+++..+.+.+. +++-.+.-.+.. .+. . ...+....++ .+++|+|+||++.||+|+.+
T Consensus 80 ~~V~IlRaG~~m~~~l~~~ip~a~vg~i~~~Rd~--~t~-----p----~~~~~~lP~i-~~~~VilvD~~laTG~T~~~ 147 (217)
T 3dmp_A 80 AIVPVLRAGVGMSDGLLELIPSARVGHIGVYRAD--DHR-----P----VEYLVRLPDL-EDRIFILCDPMVATGYSAAH 147 (217)
T ss_dssp EEEEEETTTHHHHHHHHHHCTTSEECEEECSCCC--SSS-----C----CCSEEECCCC-TTCEEEEECSEESSSHHHHH
T ss_pred EEEEecccchHHHHHHHHhCcCCceeEEEEEECC--CCC-----c----EEEeecCCCC-CCCEEEEEcCcccccHHHHH
Confidence 678889999999999999984 444333222110 000 0 0011111255 89999999999999999999
Q ss_pred HHHHHHHcCC--eEEEEEEEEeecCchhhcccc
Q 030119 141 AINLLERVGA--EVVECACVIELPDLKGRERLN 171 (182)
Q Consensus 141 ~~~~L~~~Ga--~~v~~~vl~~~~~~~~~~~l~ 171 (182)
+++.|++.|+ +.+.+++++..+ ++.+++.
T Consensus 148 ai~~L~~~G~pe~~I~~~~~vaa~--egl~~l~ 178 (217)
T 3dmp_A 148 AIDVLKRRGVPGERLMFLALVAAP--EGVQVFQ 178 (217)
T ss_dssp HHHHHHTTTCCGGGEEEECSEECH--HHHHHHH
T ss_pred HHHHHHHcCCCcCeEEEEEEEeCH--HHHHHHH
Confidence 9999999998 778888877543 5666653
No 57
>1xtt_A Probable uracil phosphoribosyltransferase; tetramer, type 1 phosphoribosyltransferase, UMP complex; HET: U5P; 1.80A {Sulfolobus solfataricus} SCOP: c.61.1.1 PDB: 1vst_A* 1xtu_A* 1xtv_A* 3g6w_A*
Probab=98.50 E-value=3.3e-07 Score=71.19 Aligned_cols=102 Identities=14% Similarity=0.158 Sum_probs=65.3
Q ss_pred cEEEEeCCCchhhHHHHHHHhC-CCeeeeecCC-CCCCcccchheeeccccceE-EEeecccCCCC--eEEEEeCccCch
Q 030119 61 SVVAGIEARGFIFGPPIALAIG-AKFVPLRKPK-KLPGKVISEEYILEYGRDCL-EMHVGAVESAE--RALVVDDLIATG 135 (182)
Q Consensus 61 d~Iv~v~~~G~~~a~~la~~l~-~p~~~~~k~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gk--~VLlVDDvitTG 135 (182)
-++|++.++|.+++..+.+.+. .++-.+.-.+ ...+.. .. ...+... +....++ .++ +|+|+||++.||
T Consensus 73 i~iV~IlRaG~~m~~gl~~~lp~a~vg~I~~~Rd~~t~~~--~~---~~~~p~~~y~klP~i-~~~~~~VilvDp~laTG 146 (216)
T 1xtt_A 73 IVIINILRAAVPLVEGLLKAFPKARQGVIGASRVEVDGKE--VP---KDMDVYIYYKKIPDI-RAKVDNVIIADPMIATA 146 (216)
T ss_dssp EEEEEEETTTHHHHHHHHHHCTTCEEEEEEEEECCCCCSS--CC---SCCCEEEEEEECCCC-CTTTCEEEEECSEESSS
T ss_pred EEEEeecCCcHHHHHHHHHHcccCccceEEEEECCCcccc--cc---cccCceEeeccCCCc-cCCcceEEEEcCCccch
Confidence 3688899999999999999874 3332221111 000000 00 0000111 1121255 788 999999999999
Q ss_pred HHHHHHHHHHHHcCC-eEEEEEEEEeecCchhhcccc
Q 030119 136 GTLCAAINLLERVGA-EVVECACVIELPDLKGRERLN 171 (182)
Q Consensus 136 ~Tl~~~~~~L~~~Ga-~~v~~~vl~~~~~~~~~~~l~ 171 (182)
+|+.++++.|++ |+ +.+.+++++.-+ ++.+++.
T Consensus 147 ~T~~~ai~~L~~-G~p~~I~~~~~vaa~--~gl~~l~ 180 (216)
T 1xtt_A 147 STMLKVLEEVVK-ANPKRIYIVSIISSE--YGVNKIL 180 (216)
T ss_dssp HHHHHHHHHHGG-GCCSEEEEECSEEEH--HHHHHHH
T ss_pred HHHHHHHHHHHh-CCCCeEEEEEEecCH--HHHHHHH
Confidence 999999999999 98 888888877533 4666663
No 58
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=80.64 E-value=18 Score=28.11 Aligned_cols=142 Identities=13% Similarity=0.074 Sum_probs=69.3
Q ss_pred chHHHHHHhhccccC---CCCCCCCceEEecccccCCHHHHHHHHHHHHHHhcCCCCcEEEEeCCCchhhHHHHHHH-hC
Q 030119 7 KDARINGIKDQIRVV---PNFPKPGIMFQDITTLLLKPKEFKDTIDMFVERYKGKNISVVAGIEARGFIFGPPIALA-IG 82 (182)
Q Consensus 7 ~~~~~~~~~~~~r~~---~~~~~~~~~~~d~~~l~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~-l~ 82 (182)
.|+.++.+.+-+++. .|+...--+-++..+-..|+.....+++.| ...++|+|+++.. +-+..++.. -+
T Consensus 18 ~hp~ld~~~~G~~~~L~~~G~~~g~nv~~~~~~a~gd~~~~~~~~~~l----~~~~~DlIiai~t---~aa~a~~~~~~~ 90 (302)
T 3lkv_A 18 EHPALDATRQGLLDGLKAKGYEEGKNLEFDYKTAQGNPAIAVQIARQF----VGENPDVLVGIAT---PTAQALVSATKT 90 (302)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCCBTTTEEEEEEECTTCHHHHHHHHHHH----HTTCCSEEEEESH---HHHHHHHHHCSS
T ss_pred cChhHHHHHHHHHHHHHhhCcccCCcEEEEEEeCCCCHHHHHHHHHHH----HhcCCcEEEEcCC---HHHHHHHhhcCC
Confidence 466677666665443 333311123345555667877766665554 4568999998763 333333333 36
Q ss_pred CCeeeeecCCCCCCccc-chhee-------ecc--ccceEEEeecccCCCCeEEEEeCccCchH--HHHHHHHHHHHcCC
Q 030119 83 AKFVPLRKPKKLPGKVI-SEEYI-------LEY--GRDCLEMHVGAVESAERALVVDDLIATGG--TLCAAINLLERVGA 150 (182)
Q Consensus 83 ~p~~~~~k~~~~~~~~~-~~~~~-------~~~--~~~~~~~~~~~~~~gk~VLlVDDvitTG~--Tl~~~~~~L~~~Ga 150 (182)
+|+++.--......... +.... .+. ....+++-...++..++|.++-|--.+++ ....+.+...+.|.
T Consensus 91 iPVVf~~v~dp~~~~l~~~~~~~g~nvtGv~~~~~~~~~l~l~~~l~P~~k~vgvi~~~~~~~s~~~~~~~~~~~~~~g~ 170 (302)
T 3lkv_A 91 IPIVFTAVTDPVGAKLVKQLEQPGKNVTGLSDLSPVEQHVELIKEILPNVKSIGVVYNPGEANAVSLMELLKLSAAKHGI 170 (302)
T ss_dssp SCEEEEEESCTTTTTSCSCSSSCCSSEEEEECCCCHHHHHHHHHHHSTTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTC
T ss_pred CCeEEEecCCcchhhhcccccCCCCcEEEEECCcCHHHHHHHHHHhCCCCCEEEEEeCCCcccHHHHHHHHHHHHHHcCC
Confidence 89988643221110000 00000 000 00011111122345688877765444433 24455666677787
Q ss_pred eEEEE
Q 030119 151 EVVEC 155 (182)
Q Consensus 151 ~~v~~ 155 (182)
+++..
T Consensus 171 ~~v~~ 175 (302)
T 3lkv_A 171 KLVEA 175 (302)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 76543
No 59
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=74.58 E-value=32 Score=27.65 Aligned_cols=74 Identities=14% Similarity=0.193 Sum_probs=47.3
Q ss_pred CCchhhHHHHHHHhCCCeeeeecCCCCCCcccchheeeccccceEEEee-cccCCCCeEEEEeCccCchH-H---HHHHH
Q 030119 68 ARGFIFGPPIALAIGAKFVPLRKPKKLPGKVISEEYILEYGRDCLEMHV-GAVESAERALVVDDLIATGG-T---LCAAI 142 (182)
Q Consensus 68 ~~G~~~a~~la~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~gk~VLlVDDvitTG~-T---l~~~~ 142 (182)
.+.-.+|..+|..||+|...+...+-..| +..+.. +.+ .|++|.||-.....-. . +.-++
T Consensus 14 ~~~~~La~~ia~~lg~~l~~~~~~~F~dG--------------E~~v~i~esv-rg~dV~iiqs~~~p~nd~lmeLl~~i 78 (319)
T 3dah_A 14 NANPALAQEVVKILGIPLGKAMVSRFSDG--------------EIQVEIQENV-RGKDVFVLQSTCAPTNDNLMELMIMV 78 (319)
T ss_dssp SSCHHHHHHHHHHHTSCCCCEEEEECTTS--------------CEEEEECSCC-BTCEEEEECCCCSSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCceeeeEEEECCCC--------------CEEEEECCCc-CCCeEEEEccCCCCCcHHHHHHHHHH
Confidence 44557999999999998766543221122 233332 445 8999999977554321 1 44567
Q ss_pred HHHHHcCCeEEEEE
Q 030119 143 NLLERVGAEVVECA 156 (182)
Q Consensus 143 ~~L~~~Ga~~v~~~ 156 (182)
++++.+||+.+.+.
T Consensus 79 dA~k~asA~rIt~V 92 (319)
T 3dah_A 79 DALKRASAGRITAA 92 (319)
T ss_dssp HHHHHTTBSEEEEE
T ss_pred HHHHHcCCcEEEEE
Confidence 78889999876543
No 60
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=70.52 E-value=24 Score=27.69 Aligned_cols=73 Identities=7% Similarity=0.115 Sum_probs=46.5
Q ss_pred CchhhHHHHHHHhCCCeeeeecCCCCCCcccchheeeccccceEEEee-cccCCCCeEEEEeCccCc-hH--HHHHHHHH
Q 030119 69 RGFIFGPPIALAIGAKFVPLRKPKKLPGKVISEEYILEYGRDCLEMHV-GAVESAERALVVDDLIAT-GG--TLCAAINL 144 (182)
Q Consensus 69 ~G~~~a~~la~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~gk~VLlVDDvitT-G~--Tl~~~~~~ 144 (182)
+.-.+|..+|..||+|...+...+-..| +..+.. +.+ .|++|.|+-..... .. -+.-++++
T Consensus 8 ~~~~la~~ia~~l~~~l~~~~~~~F~dG--------------E~~v~i~~~v-rg~dv~iiqs~~~pn~~lmell~~~~a 72 (284)
T 1u9y_A 8 QSQNLAFKVAKLLNTKLTRVEYKRFPDN--------------EIYVRIVDEI-NDDEAVIINTQKNQNDAIVETILLCDA 72 (284)
T ss_dssp TCHHHHHHHHHHTTCCEECEEEEECTTC--------------CEEEEECSCC-CSSEEEEECCCSSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCeeeeeEEEECCCC--------------CEEEEeCCCC-CCCEEEEEeCCCCCcHHHHHHHHHHHH
Confidence 3457999999999999876643321122 233332 345 89999999876542 11 14445677
Q ss_pred HHHcCCeEEEEE
Q 030119 145 LERVGAEVVECA 156 (182)
Q Consensus 145 L~~~Ga~~v~~~ 156 (182)
++.++|+.+.+.
T Consensus 73 ~~~~~a~~i~~v 84 (284)
T 1u9y_A 73 LRDEGVKKITLV 84 (284)
T ss_dssp HHTTTCCEEEEE
T ss_pred HHHcCCceEEEE
Confidence 888999875433
No 61
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=54.72 E-value=82 Score=25.30 Aligned_cols=73 Identities=16% Similarity=0.080 Sum_probs=45.3
Q ss_pred CchhhHHHHHHHhCCCeeeeecCCCCCCcccchheeeccccceEEEee-cccCCCCeEEEEeCccCc-hHH---HHHHHH
Q 030119 69 RGFIFGPPIALAIGAKFVPLRKPKKLPGKVISEEYILEYGRDCLEMHV-GAVESAERALVVDDLIAT-GGT---LCAAIN 143 (182)
Q Consensus 69 ~G~~~a~~la~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~gk~VLlVDDvitT-G~T---l~~~~~ 143 (182)
+.-.+|..+|..||+|...+...+-..| +..+.. +.+ .|+.|+||-..... -.. +.-+++
T Consensus 11 ~~~~La~~ia~~lg~~l~~~~~~~F~dG--------------E~~v~i~esv-rg~dV~iiqs~~~p~nd~lmeLl~~id 75 (326)
T 3s5j_B 11 SHQDLSQKIADRLGLELGKVVTKKFSNQ--------------ETCVEIGESV-RGEDVYIVQSGCGEINDNLMELLIMIN 75 (326)
T ss_dssp SCCHHHHHHHHHTTCCCCCEEEEECTTS--------------CEEEEECSCC-TTCEEEEECCCCSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCceeeeEEeECCCC--------------CEEEEECCCc-CCCcEEEEecCCCCccHHHHHHHHHHH
Confidence 4447999999999998866543221122 233332 455 89999999764432 111 334567
Q ss_pred HHHHcCCeEEEEE
Q 030119 144 LLERVGAEVVECA 156 (182)
Q Consensus 144 ~L~~~Ga~~v~~~ 156 (182)
+++.++|+.+.+.
T Consensus 76 A~k~asA~rIt~V 88 (326)
T 3s5j_B 76 ACKIASASRVTAV 88 (326)
T ss_dssp HHHHTTCSEEEEE
T ss_pred HHHhcCCcEEEEe
Confidence 7788999876543
No 62
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=52.36 E-value=23 Score=22.33 Aligned_cols=35 Identities=11% Similarity=0.110 Sum_probs=30.9
Q ss_pred ccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeE
Q 030119 118 AVESAERALVVDDLIATGGTLCAAINLLERVGAEV 152 (182)
Q Consensus 118 ~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~ 152 (182)
.+..|++|+=|+..-.+|.|..++.++|++.|-.+
T Consensus 40 Gl~~GD~Il~VNG~~v~~~~~~evv~llr~~g~~V 74 (82)
T 1r6j_A 40 GLLTEHNICEINGQNVIGLKDSQIADILSTSGTVV 74 (82)
T ss_dssp TCCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEE
T ss_pred CCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEE
Confidence 45689999999999999999999999999877654
No 63
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=52.17 E-value=13 Score=25.54 Aligned_cols=30 Identities=27% Similarity=0.340 Sum_probs=19.6
Q ss_pred CCCeEEEEeCccCchHHHHHHHHHHHHcCCeEE
Q 030119 121 SAERALVVDDLIATGGTLCAAINLLERVGAEVV 153 (182)
Q Consensus 121 ~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v 153 (182)
++-|||||||--+.- ..+.+.|++.|..++
T Consensus 11 k~~rILiVDD~~~~r---~~l~~~L~~~G~~~v 40 (134)
T 3to5_A 11 KNMKILIVDDFSTMR---RIVKNLLRDLGFNNT 40 (134)
T ss_dssp TTCCEEEECSCHHHH---HHHHHHHHHTTCCCE
T ss_pred CCCEEEEEeCCHHHH---HHHHHHHHHcCCcEE
Confidence 556899999976553 344455667776543
No 64
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=50.76 E-value=28 Score=28.32 Aligned_cols=48 Identities=10% Similarity=-0.051 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCcEEEEeCCCchhhHHHHHHHhCCCeeee
Q 030119 41 PKEFKDTIDMFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKFVPL 88 (182)
Q Consensus 41 ~~~~~~l~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~~p~~~~ 88 (182)
.+....+...+.+.+...+||+|+........++...|..+++|++..
T Consensus 76 ~~~~~~~~~~l~~~l~~~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~ 123 (385)
T 4hwg_A 76 AKSIGLVIEKVDEVLEKEKPDAVLFYGDTNSCLSAIAAKRRKIPIFHM 123 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHCCSEEEEESCSGGGGGHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEECCchHHHHHHHHHHhCCCEEEE
Confidence 344444445555566556899999987666666766777889998765
No 65
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=49.86 E-value=35 Score=21.76 Aligned_cols=27 Identities=30% Similarity=0.197 Sum_probs=16.0
Q ss_pred CCeEEEEeCccCchHHHHHHHHHHHHcCCe
Q 030119 122 AERALVVDDLIATGGTLCAAINLLERVGAE 151 (182)
Q Consensus 122 gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~ 151 (182)
+++||||||=-.. .......|++.|..
T Consensus 2 ~~~ilivdd~~~~---~~~l~~~L~~~g~~ 28 (120)
T 3f6p_A 2 DKKILVVDDEKPI---ADILEFNLRKEGYE 28 (120)
T ss_dssp CCEEEEECSCHHH---HHHHHHHHHHTTCE
T ss_pred CCeEEEEECCHHH---HHHHHHHHHhCCEE
Confidence 3578888885443 33344555566654
No 66
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=47.68 E-value=40 Score=21.63 Aligned_cols=27 Identities=30% Similarity=0.277 Sum_probs=16.2
Q ss_pred CeEEEEeCccCchHHHHHHHHHHHHcCCeE
Q 030119 123 ERALVVDDLIATGGTLCAAINLLERVGAEV 152 (182)
Q Consensus 123 k~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~ 152 (182)
++||||||--.. .......|++.|..+
T Consensus 3 ~~ILivdd~~~~---~~~l~~~l~~~g~~v 29 (122)
T 3gl9_A 3 KKVLLVDDSAVL---RKIVSFNLKKEGYEV 29 (122)
T ss_dssp CEEEEECSCHHH---HHHHHHHHHHTTCEE
T ss_pred ceEEEEeCCHHH---HHHHHHHHHHCCcEE
Confidence 578899885443 334445556666543
No 67
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=46.36 E-value=44 Score=21.42 Aligned_cols=29 Identities=17% Similarity=0.198 Sum_probs=19.1
Q ss_pred CCCeEEEEeCccCchHHHHHHHHHHHHcCCeE
Q 030119 121 SAERALVVDDLIATGGTLCAAINLLERVGAEV 152 (182)
Q Consensus 121 ~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~ 152 (182)
.+++||||||=-.. .....+.|.+.|..+
T Consensus 6 ~~~~ilivdd~~~~---~~~l~~~L~~~g~~v 34 (130)
T 3eod_A 6 VGKQILIVEDEQVF---RSLLDSWFSSLGATT 34 (130)
T ss_dssp TTCEEEEECSCHHH---HHHHHHHHHHTTCEE
T ss_pred CCCeEEEEeCCHHH---HHHHHHHHHhCCceE
Confidence 57889999986554 344445566667654
No 68
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=46.24 E-value=1.1e+02 Score=25.03 Aligned_cols=73 Identities=10% Similarity=0.067 Sum_probs=44.9
Q ss_pred CchhhHHH---HHHHhCCCeeeeecCCCCCCcccchheeeccccceEEEee-cccCCCCeEEEEeCccCc-hHH---HHH
Q 030119 69 RGFIFGPP---IALAIGAKFVPLRKPKKLPGKVISEEYILEYGRDCLEMHV-GAVESAERALVVDDLIAT-GGT---LCA 140 (182)
Q Consensus 69 ~G~~~a~~---la~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~gk~VLlVDDvitT-G~T---l~~ 140 (182)
+.-.+|.. +|..||+|...+...+-.. ++..+.. +.+ .|+.|.||-..... -.. +.-
T Consensus 37 ~~~~la~~~~~ia~~lg~~l~~~~~~~F~d--------------GE~~v~i~esv-rg~dV~iiqs~~~~~nd~lmeLl~ 101 (379)
T 2ji4_A 37 SNSSCMELSKKIAERLGVEMGKVQVYQEPN--------------RETRVQIQESV-RGKDVFIIQTVSKDVNTTIMELLI 101 (379)
T ss_dssp CSGGGGHHHHHHHHHHTCCCCCEEEEECTT--------------SCEEEEECSCC-TTCEEEEECCCCSCHHHHHHHHHH
T ss_pred CCHHHHHhHHHHHHHhCCceEeeEEEECCC--------------CCEEEEeCCCc-CCCEEEEEeCCCCCccHHHHHHHH
Confidence 34468888 9999999876654222111 2223332 345 89999999886531 222 334
Q ss_pred HHHHHHHcCCeEEEEE
Q 030119 141 AINLLERVGAEVVECA 156 (182)
Q Consensus 141 ~~~~L~~~Ga~~v~~~ 156 (182)
++++++.++|+.+.+.
T Consensus 102 ~idA~k~asA~rit~V 117 (379)
T 2ji4_A 102 MVYACKTSCAKSIIGV 117 (379)
T ss_dssp HHHHHHHTTCSEEEEE
T ss_pred HHHHHHhcCCceEEEE
Confidence 5567888899876543
No 69
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=44.50 E-value=63 Score=25.41 Aligned_cols=71 Identities=8% Similarity=-0.010 Sum_probs=42.2
Q ss_pred chhhHHHHHHHhCCCeeeeecCCCCCCcccchheeeccccceEEEeecccCCCCeEEEEeCccCch-HH---HHHHHHHH
Q 030119 70 GFIFGPPIALAIGAKFVPLRKPKKLPGKVISEEYILEYGRDCLEMHVGAVESAERALVVDDLIATG-GT---LCAAINLL 145 (182)
Q Consensus 70 G~~~a~~la~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLlVDDvitTG-~T---l~~~~~~L 145 (182)
.-.+|..+|..||+|.......+-..| +..+....- |++|.||--....- .. +.-+++++
T Consensus 9 ~~~la~~ia~~lg~~l~~~~~~~F~dG--------------E~~v~i~e~--g~dV~iiqs~~~p~nd~lmeLl~~ida~ 72 (286)
T 3lrt_A 9 SLKLAARIAEELKTEPVMPDERRFPDG--------------ELYLRYDED--LTGHNIFIIGNTHSDAEVMEMILTLSAI 72 (286)
T ss_dssp GHHHHHHHHHHTTSCEECCEEEECTTS--------------CEEEECCSC--CTTSEEEEECCCCSHHHHHHHHHHHHHG
T ss_pred CHHHHHHHHHHhCCCeeeeEEEECCCC--------------CEEEEEcCC--CCcEEEEEeCCCCCcHHHHHHHHHHHHH
Confidence 346899999999999876543221122 223332222 88888886544321 12 33466777
Q ss_pred HHcCCeEEEEE
Q 030119 146 ERVGAEVVECA 156 (182)
Q Consensus 146 ~~~Ga~~v~~~ 156 (182)
+.+||+.+.+.
T Consensus 73 k~~~A~~it~V 83 (286)
T 3lrt_A 73 QDYRTKSVNII 83 (286)
T ss_dssp GGSCCSEEEEE
T ss_pred HHcCCCEEEEE
Confidence 88898866443
No 70
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=43.46 E-value=60 Score=20.45 Aligned_cols=30 Identities=20% Similarity=0.358 Sum_probs=25.4
Q ss_pred ccCCCCeEEEEeCccCchHHHHHHHHHHHHcCC
Q 030119 118 AVESAERALVVDDLIATGGTLCAAINLLERVGA 150 (182)
Q Consensus 118 ~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga 150 (182)
.+.+++.|+++. .+|..-..++..|++.|-
T Consensus 52 ~l~~~~~ivvyC---~~g~rs~~a~~~L~~~G~ 81 (100)
T 3foj_A 52 YFNDNETYYIIC---KAGGRSAQVVQYLEQNGV 81 (100)
T ss_dssp GSCTTSEEEEEC---SSSHHHHHHHHHHHTTTC
T ss_pred hCCCCCcEEEEc---CCCchHHHHHHHHHHCCC
Confidence 455788899987 788889999999999997
No 71
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=43.29 E-value=57 Score=25.95 Aligned_cols=41 Identities=22% Similarity=0.163 Sum_probs=27.7
Q ss_pred HHHHHHHhcCCCCcEEEEeCCCchhhHHHHHHHhCCCeeeee
Q 030119 48 IDMFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKFVPLR 89 (182)
Q Consensus 48 ~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~~p~~~~~ 89 (182)
...+.+.+...++|+|+. +..-...+..+|+.+|+|++...
T Consensus 107 ~~~l~~~l~~~~PDlVi~-d~~~~~~~~~aA~~~giP~v~~~ 147 (415)
T 3rsc_A 107 LRATAEALDGDVPDLVLY-DDFPFIAGQLLAARWRRPAVRLS 147 (415)
T ss_dssp HHHHHHHHSSSCCSEEEE-ESTTHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHhccCCCEEEE-CchhhhHHHHHHHHhCCCEEEEE
Confidence 345555666668999994 41223456777889999998754
No 72
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=42.44 E-value=48 Score=21.72 Aligned_cols=28 Identities=21% Similarity=0.319 Sum_probs=16.2
Q ss_pred CCCeEEEEeCccCchHHHHHHHHHHHHcCCe
Q 030119 121 SAERALVVDDLIATGGTLCAAINLLERVGAE 151 (182)
Q Consensus 121 ~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~ 151 (182)
++.+||||||--.. .....+.|.+.|..
T Consensus 4 ~~~~ilivdd~~~~---~~~l~~~L~~~g~~ 31 (140)
T 3h5i_A 4 KDKKILIVEDSKFQ---AKTIANILNKYGYT 31 (140)
T ss_dssp --CEEEEECSCHHH---HHHHHHHHHHTTCE
T ss_pred CCcEEEEEeCCHHH---HHHHHHHHHHcCCE
Confidence 45789999986544 33444555566654
No 73
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=42.15 E-value=66 Score=25.22 Aligned_cols=41 Identities=20% Similarity=0.041 Sum_probs=28.2
Q ss_pred HHHHHHHhcCCCCcEEEEeCCCchhhHHHHHHHhCCCeeeee
Q 030119 48 IDMFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKFVPLR 89 (182)
Q Consensus 48 ~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~~p~~~~~ 89 (182)
...+.+.+...++|+|+.-. .....+..+|+.+|+|++...
T Consensus 91 ~~~l~~~l~~~~pD~Vi~d~-~~~~~~~~aA~~~giP~v~~~ 131 (402)
T 3ia7_A 91 LRAAEEALGDNPPDLVVYDV-FPFIAGRLLAARWDRPAVRLT 131 (402)
T ss_dssp HHHHHHHHTTCCCSEEEEES-TTHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHhccCCCEEEECc-hHHHHHHHHHHhhCCCEEEEe
Confidence 34455566666899998731 233457778899999998764
No 74
>1sxj_A Activator 1 95 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=41.98 E-value=1.2e+02 Score=25.49 Aligned_cols=56 Identities=7% Similarity=0.011 Sum_probs=38.0
Q ss_pred cccccCCHHHHHHHHHHHHHHhc---------------CCCCcEEEEeCCCch-hhHHHHHHHhCCCeeeee
Q 030119 34 ITTLLLKPKEFKDTIDMFVERYK---------------GKNISVVAGIEARGF-IFGPPIALAIGAKFVPLR 89 (182)
Q Consensus 34 ~~~l~~~~~~~~~l~~~la~~~~---------------~~~~d~Iv~v~~~G~-~~a~~la~~l~~p~~~~~ 89 (182)
...+....+..+.+...+..... ....=++.|++..|= .+|..+|..++.+++.+.
T Consensus 38 ~~dliG~~~~~~~L~~~l~~~~~~~~~~~~~~g~~~~~~~~~lLL~GppGtGKTtla~~la~~l~~~~i~in 109 (516)
T 1sxj_A 38 LQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQELGYDILEQN 109 (516)
T ss_dssp GGGCCSCHHHHHHHHHHHHTHHHHHHTTTCCCCTTSTTSCSEEEEECSTTSSHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHhcCCHHHHHHHHHHHHHhHhhchhhccccCccCCCCCcEEEEECCCCCCHHHHHHHHHHHcCCCEEEEe
Confidence 45577788888777776654221 012336778887775 588999999998887664
No 75
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=41.91 E-value=34 Score=22.07 Aligned_cols=31 Identities=26% Similarity=0.306 Sum_probs=25.2
Q ss_pred cCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeE
Q 030119 119 VESAERALVVDDLIATGGTLCAAINLLERVGAEV 152 (182)
Q Consensus 119 ~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~ 152 (182)
+.+++.|+++++ +|..-..++..|++.|-..
T Consensus 49 l~~~~~ivvyc~---~g~rs~~a~~~L~~~G~~~ 79 (106)
T 3hix_A 49 LEKSRDIYVYGA---GDEQTSQAVNLLRSAGFEH 79 (106)
T ss_dssp SCTTSCEEEECS---SHHHHHHHHHHHHHTTCSC
T ss_pred CCCCCeEEEEEC---CCChHHHHHHHHHHcCCcC
Confidence 446778999875 7888899999999999764
No 76
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=41.82 E-value=38 Score=22.11 Aligned_cols=38 Identities=13% Similarity=0.199 Sum_probs=32.1
Q ss_pred cCCCCeEEEEeCccCchHHHHHHHHHHHHcC---CeEEEEE
Q 030119 119 VESAERALVVDDLIATGGTLCAAINLLERVG---AEVVECA 156 (182)
Q Consensus 119 ~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~G---a~~v~~~ 156 (182)
+..|++|+=|++.-.++.|..++.++|+..+ ...+.+.
T Consensus 60 l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~~r~~~~~~l~ 100 (109)
T 1wi4_A 60 LKPGDQLVSINKESMIGVSFEEAKSIITRAKLRSESPWEIA 100 (109)
T ss_dssp CCTTCBEEEETTSCCTTCCHHHHHHHHHHSCCSSSSCEEEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHccccCCCceEEEE
Confidence 7799999999999999999999999999887 4444433
No 77
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=41.08 E-value=55 Score=21.16 Aligned_cols=52 Identities=21% Similarity=0.274 Sum_probs=33.7
Q ss_pred ccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeecCchhhccccCCCeEEe
Q 030119 118 AVESAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELPDLKGRERLNGKPLYVL 178 (182)
Q Consensus 118 ~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~~~~~~~~l~~~~~~sl 178 (182)
.+.+++.|+++- .+|..-..++..|++.|-+.+. + . +-..++.. +|+|+.++
T Consensus 52 ~l~~~~~ivv~C---~~G~rS~~aa~~L~~~G~~~~~---l-~-GG~~~W~~-~g~pvesi 103 (103)
T 3iwh_A 52 SFNKNEIYYIVC---AGGVRSAKVVEYLEANGIDAVN---V-E-GGMHAWGD-EGLEIKSI 103 (103)
T ss_dssp GCCTTSEEEEEC---SSSSHHHHHHHHHHTTTCEEEE---E-T-THHHHHCS-SSCBCCC-
T ss_pred hhcCCCeEEEEC---CCCHHHHHHHHHHHHcCCCEEE---e-c-ChHHHHHH-CCCcceeC
Confidence 455788888874 6788888999999999986542 2 1 11123322 47787654
No 78
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=41.06 E-value=68 Score=25.71 Aligned_cols=39 Identities=15% Similarity=0.114 Sum_probs=27.9
Q ss_pred HHHHHHhcCCCCcEEEEeCCCchhhHHHHHHHhCCCeeeee
Q 030119 49 DMFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKFVPLR 89 (182)
Q Consensus 49 ~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~~p~~~~~ 89 (182)
..+.+.++...+|+||+-.. ...+..+|+.+|+|.+...
T Consensus 99 ~~l~~~l~~~~pD~VI~d~~--~~~~~~~A~~lgIP~v~~~ 137 (424)
T 2iya_A 99 PQLEDAYADDRPDLIVYDIA--SWPAPVLGRKWDIPFVQLS 137 (424)
T ss_dssp HHHHHHTTTSCCSEEEEETT--CTHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHhccCCCEEEEcCc--ccHHHHHHHhcCCCEEEEe
Confidence 34445555568999997553 3568889999999987654
No 79
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=39.90 E-value=57 Score=20.85 Aligned_cols=28 Identities=36% Similarity=0.337 Sum_probs=15.0
Q ss_pred CCCeEEEEeCccCchHHHHHHHHHHHHcCCe
Q 030119 121 SAERALVVDDLIATGGTLCAAINLLERVGAE 151 (182)
Q Consensus 121 ~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~ 151 (182)
.+.+||||||--.... ...+.|.+.|..
T Consensus 5 ~~~~ilivdd~~~~~~---~l~~~L~~~g~~ 32 (132)
T 3lte_A 5 QSKRILVVDDDQAMAA---AIERVLKRDHWQ 32 (132)
T ss_dssp --CEEEEECSCHHHHH---HHHHHHHHTTCE
T ss_pred CCccEEEEECCHHHHH---HHHHHHHHCCcE
Confidence 4567888888554433 334444555554
No 80
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=39.72 E-value=38 Score=23.27 Aligned_cols=33 Identities=27% Similarity=0.333 Sum_probs=26.3
Q ss_pred ccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEE
Q 030119 118 AVESAERALVVDDLIATGGTLCAAINLLERVGAEVV 153 (182)
Q Consensus 118 ~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v 153 (182)
.+.+++.|+++++ +|.....++..|+..|-..+
T Consensus 52 ~l~~~~~ivvyC~---~g~rs~~aa~~L~~~G~~~v 84 (141)
T 3ilm_A 52 SLEKSRDIYVYGA---GDEQTSQAVNLLRSAGFEHV 84 (141)
T ss_dssp TSCTTSEEEEECS---SHHHHHHHHHHHHHTTCCSE
T ss_pred cCCCCCeEEEEEC---CChHHHHHHHHHHHcCCCCE
Confidence 3456788999876 78888899999999997543
No 81
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=39.13 E-value=36 Score=22.95 Aligned_cols=38 Identities=18% Similarity=0.198 Sum_probs=32.6
Q ss_pred ccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEE
Q 030119 118 AVESAERALVVDDLIATGGTLCAAINLLERVGAEVVEC 155 (182)
Q Consensus 118 ~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~ 155 (182)
.+..|..|+=|++.-.++.|..++.++|+..+...+..
T Consensus 75 gL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l 112 (130)
T 1i16_A 75 TVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDGPVTI 112 (130)
T ss_dssp CCCTTCCEEECSSCBGGGSCHHHHHHHHHTSCSSEEEE
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEE
Confidence 57789999999999999999999999999987664433
No 82
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=38.11 E-value=59 Score=21.17 Aligned_cols=43 Identities=9% Similarity=0.016 Sum_probs=34.5
Q ss_pred cccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEE
Q 030119 117 GAVESAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVI 159 (182)
Q Consensus 117 ~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~ 159 (182)
+.+..|+.|+=|++.-..|-|-.+++++|++...-..-.+.++
T Consensus 45 g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g~~~~L~lv 87 (95)
T 3gge_A 45 KTICVGDHIESINGENIVGWRHYDVAKKLKELKKEELFTMKLI 87 (95)
T ss_dssp TTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCCCEEEEEEE
Confidence 3566899999999999999999999999999754333345555
No 83
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=38.10 E-value=1.5e+02 Score=23.48 Aligned_cols=77 Identities=9% Similarity=0.105 Sum_probs=47.1
Q ss_pred CCCchhhHHHHHHHhCCCeeeeecCCCCCCcccchheeeccccceEEEee-cccCCCCeEEEEeCccCch-HH---HHHH
Q 030119 67 EARGFIFGPPIALAIGAKFVPLRKPKKLPGKVISEEYILEYGRDCLEMHV-GAVESAERALVVDDLIATG-GT---LCAA 141 (182)
Q Consensus 67 ~~~G~~~a~~la~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~gk~VLlVDDvitTG-~T---l~~~ 141 (182)
-.+.-.+|..+|..||+|...+...+-.. ++..+.. +.+ .|++|.||-.....- .. +.-+
T Consensus 15 ~~~~~~la~~ia~~lg~~l~~~~~~~F~d--------------GE~~v~i~e~v-rg~dv~iiqs~~~~~nd~lmell~~ 79 (317)
T 1dku_A 15 LNSNPELAKEIADIVGVQLGKCSVTRFSD--------------GEVQINIEESI-RGCDCYIIQSTSDPVNEHIMELLIM 79 (317)
T ss_dssp CSSCHHHHHHHHHHHTCCCCCEEEEECTT--------------SCEEEEECSCC-TTCEEEEECCCCSSHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhCCeeEeeEEEECCC--------------CCEEEEecCCC-CCCEEEEEcCCCCCCcHHHHHHHHH
Confidence 34556899999999999887654322112 2233332 345 899999988754431 12 3345
Q ss_pred HHHHHHcCCeEEEEEEE
Q 030119 142 INLLERVGAEVVECACV 158 (182)
Q Consensus 142 ~~~L~~~Ga~~v~~~vl 158 (182)
++.++..+++.+.++..
T Consensus 80 ~~a~~~~~a~~i~av~p 96 (317)
T 1dku_A 80 VDALKRASAKTINIVIP 96 (317)
T ss_dssp HHHHHHTTCSEEEEEES
T ss_pred HHHhhccCcceEEEEEE
Confidence 56667788876654433
No 84
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=37.91 E-value=59 Score=19.71 Aligned_cols=31 Identities=19% Similarity=0.239 Sum_probs=25.1
Q ss_pred CCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEE
Q 030119 120 ESAERALVVDDLIATGGTLCAAINLLERVGAEVV 153 (182)
Q Consensus 120 ~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v 153 (182)
.+++.|+++.+ +|.....++..|++.|-..+
T Consensus 39 ~~~~~ivv~C~---~g~rs~~aa~~L~~~G~~~v 69 (85)
T 2jtq_A 39 DKNDTVKVYCN---AGRQSGQAKEILSEMGYTHV 69 (85)
T ss_dssp CTTSEEEEEES---SSHHHHHHHHHHHHTTCSSE
T ss_pred CCCCcEEEEcC---CCchHHHHHHHHHHcCCCCE
Confidence 46788999874 68888899999999997644
No 85
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=37.76 E-value=30 Score=23.52 Aligned_cols=78 Identities=12% Similarity=0.173 Sum_probs=48.9
Q ss_pred CchHHHHHHhhccccCCCCCCCCceEEecccccCCHHHHHHHHHHHHHHhcCCCCcEEEEeCCCchhhHHHHHHHhCCCe
Q 030119 6 DKDARINGIKDQIRVVPNFPKPGIMFQDITTLLLKPKEFKDTIDMFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKF 85 (182)
Q Consensus 6 ~~~~~~~~~~~~~r~~~~~~~~~~~~~d~~~l~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~~p~ 85 (182)
|-+...++|.+.+..-|+|=....+-+|+..+- +...+..+...+ ..... .++|+..+.-..-...|..+|+|+
T Consensus 26 d~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~l~-~~~dl~~L~~~l----~~~gl-~~vGV~g~~~~~~~~~a~~~GLp~ 99 (120)
T 3ghf_A 26 EPEVIRQALEDKIAQAPAFLKHAPVVINVSGLE-SPVNWPELHKIV----TSTGL-RIIGVSGCKDASLKVEIDRMGLPL 99 (120)
T ss_dssp CHHHHHHHHHHHHHHSHHHHTTCEEEEEEEECC-SSCCHHHHHHHH----HTTTC-EEEEEESCCCHHHHHHHHHHTCCE
T ss_pred CHHHHHHHHHHHHHhChHhhCCCcEEEEccccC-ChHHHHHHHHHH----HHcCC-EEEEEeCCCcHHHHHHHHHCCCCc
Confidence 345667888888888898655556777887764 222333443333 23232 567887654343456778889998
Q ss_pred eeee
Q 030119 86 VPLR 89 (182)
Q Consensus 86 ~~~~ 89 (182)
....
T Consensus 100 l~~~ 103 (120)
T 3ghf_A 100 LTEG 103 (120)
T ss_dssp ECCC
T ss_pred cCCC
Confidence 7643
No 86
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=37.66 E-value=87 Score=25.02 Aligned_cols=40 Identities=15% Similarity=0.092 Sum_probs=28.2
Q ss_pred HHHHHHHhcCCCCcEEEEeCCCchhhHHHHHHHhCCCeeeee
Q 030119 48 IDMFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKFVPLR 89 (182)
Q Consensus 48 ~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~~p~~~~~ 89 (182)
...+.+.+++.++|+|++-.. + ..+..+|+.+++|.+...
T Consensus 93 ~~~l~~~l~~~~pD~Vi~d~~-~-~~~~~~A~~~giP~v~~~ 132 (430)
T 2iyf_A 93 LPQLADAYADDIPDLVLHDIT-S-YPARVLARRWGVPAVSLS 132 (430)
T ss_dssp HHHHHHHHTTSCCSEEEEETT-C-HHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHhhccCCCEEEECCc-c-HHHHHHHHHcCCCEEEEe
Confidence 344555565668999997442 3 477888999999987754
No 87
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=36.60 E-value=59 Score=20.93 Aligned_cols=30 Identities=27% Similarity=0.433 Sum_probs=25.2
Q ss_pred ccCCCCeEEEEeCccCchHHHHHHHHHHHHcCC
Q 030119 118 AVESAERALVVDDLIATGGTLCAAINLLERVGA 150 (182)
Q Consensus 118 ~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga 150 (182)
.+.+++.|+++. .+|..-..++..|++.|-
T Consensus 51 ~l~~~~~ivvyC---~~G~rs~~aa~~L~~~G~ 80 (108)
T 3gk5_A 51 ILERDKKYAVIC---AHGNRSAAAVEFLSQLGL 80 (108)
T ss_dssp GSCTTSCEEEEC---SSSHHHHHHHHHHHTTTC
T ss_pred hCCCCCeEEEEc---CCCcHHHHHHHHHHHcCC
Confidence 345778899987 688888899999999997
No 88
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=35.37 E-value=88 Score=20.04 Aligned_cols=35 Identities=20% Similarity=0.368 Sum_probs=30.6
Q ss_pred cCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeEE
Q 030119 119 VESAERALVVDDLIATGGTLCAAINLLERVGAEVV 153 (182)
Q Consensus 119 ~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v 153 (182)
+..|..|+=|++.-.++.|...+.+.++..+...+
T Consensus 63 L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v 97 (108)
T 2d92_A 63 LLPGDRLVSVNEYCLDNTSLAEAVEILKAVPPGLV 97 (108)
T ss_dssp CCTTCEEEEESSCBCTTCCHHHHHHHHHHSCSEEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeE
Confidence 77899999999999999999999999999755544
No 89
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=34.79 E-value=66 Score=19.92 Aligned_cols=32 Identities=9% Similarity=0.116 Sum_probs=29.5
Q ss_pred cCCCCeEEEEeCccCchHHHHHHHHHHHHcCC
Q 030119 119 VESAERALVVDDLIATGGTLCAAINLLERVGA 150 (182)
Q Consensus 119 ~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga 150 (182)
+..|+.|+=|++.-.+|.|...+.+.|+..+.
T Consensus 47 L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 78 (93)
T 3o46_A 47 IHVGDELREVNGIPVEDKRPEEIIQILAQSQG 78 (93)
T ss_dssp CCTTCEEEEETTEESTTSCHHHHHHHHHHCCE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 77899999999999999999999999998874
No 90
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=34.58 E-value=79 Score=19.29 Aligned_cols=12 Identities=8% Similarity=0.169 Sum_probs=7.0
Q ss_pred CeEEEEeCccCc
Q 030119 123 ERALVVDDLIAT 134 (182)
Q Consensus 123 k~VLlVDDvitT 134 (182)
++||||||=-..
T Consensus 2 ~~iliv~~~~~~ 13 (119)
T 2j48_A 2 GHILLLEEEDEA 13 (119)
T ss_dssp CEEEEECCCHHH
T ss_pred CEEEEEeCCHHH
Confidence 467777765433
No 91
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=34.21 E-value=60 Score=25.71 Aligned_cols=38 Identities=13% Similarity=-0.096 Sum_probs=25.6
Q ss_pred HHHHHHhcCCCCcEEEEeCCCchhhHHHHHHHhCCCeeee
Q 030119 49 DMFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKFVPL 88 (182)
Q Consensus 49 ~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~~p~~~~ 88 (182)
..+.+.+...++|+|++-. ....+...|+.+++|++..
T Consensus 120 ~~l~~~l~~~~pDvVv~~~--~~~~~~~aa~~~giP~v~~ 157 (412)
T 3otg_A 120 DELQPVIERLRPDLVVQEI--SNYGAGLAALKAGIPTICH 157 (412)
T ss_dssp HHHHHHHHHHCCSEEEEET--TCHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHhcCCCEEEECc--hhhHHHHHHHHcCCCEEEe
Confidence 3444444445899998863 3344667788999998874
No 92
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=33.99 E-value=83 Score=19.82 Aligned_cols=30 Identities=23% Similarity=0.238 Sum_probs=24.8
Q ss_pred ccCCCCeEEEEeCccCchHHHHHHHHHHHHcCC
Q 030119 118 AVESAERALVVDDLIATGGTLCAAINLLERVGA 150 (182)
Q Consensus 118 ~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga 150 (182)
.+.+++.|+++. .+|..-..++..|++.|-
T Consensus 52 ~l~~~~~iv~yC---~~g~rs~~a~~~L~~~G~ 81 (103)
T 3eme_A 52 SFNKNEIYYIVC---AGGVRSAKVVEYLEANGI 81 (103)
T ss_dssp GCCTTSEEEEEC---SSSSHHHHHHHHHHTTTC
T ss_pred hCCCCCeEEEEC---CCChHHHHHHHHHHHCCC
Confidence 345788899987 578888889999999998
No 93
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=33.58 E-value=66 Score=25.28 Aligned_cols=37 Identities=14% Similarity=0.202 Sum_probs=25.1
Q ss_pred HHHHhcCCCCcEEEEeCCCchhhHHHHHHHhCCCeeeee
Q 030119 51 FVERYKGKNISVVAGIEARGFIFGPPIALAIGAKFVPLR 89 (182)
Q Consensus 51 la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~~p~~~~~ 89 (182)
+.+.+++.++|+|++-.. ...+..+|+.+|+|++...
T Consensus 99 l~~~l~~~~pD~Vi~~~~--~~~~~~~a~~~giP~v~~~ 135 (384)
T 2p6p_A 99 MLDFSRAWRPDLIVGGTM--SYVAPLLALHLGVPHARQT 135 (384)
T ss_dssp HHHHHHHHCCSEEEEETT--CTHHHHHHHHHTCCEEEEC
T ss_pred HHHHHhccCCcEEEECcc--hhhHHHHHHhcCCCEEEec
Confidence 333344447999997543 3466778899999987653
No 94
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=33.24 E-value=82 Score=21.08 Aligned_cols=30 Identities=20% Similarity=0.310 Sum_probs=19.4
Q ss_pred CCCeEEEEeCccCchHHHHHHHHHHHHcCCeEE
Q 030119 121 SAERALVVDDLIATGGTLCAAINLLERVGAEVV 153 (182)
Q Consensus 121 ~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v 153 (182)
...+||||||=-.. .....+.|++.|..++
T Consensus 35 ~~~~Ilivdd~~~~---~~~l~~~L~~~g~~v~ 64 (157)
T 3hzh_A 35 IPFNVLIVDDSVFT---VKQLTQIFTSEGFNII 64 (157)
T ss_dssp EECEEEEECSCHHH---HHHHHHHHHHTTCEEE
T ss_pred CceEEEEEeCCHHH---HHHHHHHHHhCCCeEE
Confidence 34589999996544 4455556667776654
No 95
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=33.11 E-value=47 Score=21.27 Aligned_cols=31 Identities=19% Similarity=0.175 Sum_probs=24.8
Q ss_pred cCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeE
Q 030119 119 VESAERALVVDDLIATGGTLCAAINLLERVGAEV 152 (182)
Q Consensus 119 ~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~ 152 (182)
+.+++.|+++.+ +|..-..++..|++.|-+.
T Consensus 55 l~~~~~ivvyc~---~g~rs~~a~~~L~~~G~~~ 85 (108)
T 1gmx_A 55 NDFDTPVMVMCY---HGNSSKGAAQYLLQQGYDV 85 (108)
T ss_dssp SCTTSCEEEECS---SSSHHHHHHHHHHHHTCSS
T ss_pred cCCCCCEEEEcC---CCchHHHHHHHHHHcCCce
Confidence 456788999875 6888888999999999753
No 96
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=33.09 E-value=93 Score=20.05 Aligned_cols=28 Identities=21% Similarity=0.185 Sum_probs=17.0
Q ss_pred CCCeEEEEeCccCchHHHHHHHHHHHHcCCe
Q 030119 121 SAERALVVDDLIATGGTLCAAINLLERVGAE 151 (182)
Q Consensus 121 ~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~ 151 (182)
+..+||||||=-.. .....+.|.+.|..
T Consensus 5 ~~~~iLivdd~~~~---~~~l~~~l~~~g~~ 32 (140)
T 3grc_A 5 PRPRILICEDDPDI---ARLLNLMLEKGGFD 32 (140)
T ss_dssp CCSEEEEECSCHHH---HHHHHHHHHHTTCE
T ss_pred CCCCEEEEcCCHHH---HHHHHHHHHHCCCe
Confidence 35678999886544 33444555566654
No 97
>2r44_A Uncharacterized protein; putative ATPase, structural genomics, joint center for struc genomics, JCSG; HET: MSE PG4; 2.00A {Cytophaga hutchinsonii atcc 33406}
Probab=32.72 E-value=1.7e+02 Score=22.52 Aligned_cols=104 Identities=10% Similarity=0.096 Sum_probs=53.6
Q ss_pred cCCHHHHHHHHHHHHHHhcCCCCcEEEEeCCCch-hhHHHHHHHhCCCeeeeecCCCCCCcccchheeeccccceEEEee
Q 030119 38 LLKPKEFKDTIDMFVERYKGKNISVVAGIEARGF-IFGPPIALAIGAKFVPLRKPKKLPGKVISEEYILEYGRDCLEMHV 116 (182)
Q Consensus 38 ~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~~G~-~~a~~la~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (182)
....+..+.+...+.. ...=++.|+|..|= .+|..++..++.++..+.-...................+.+...+
T Consensus 30 ~g~~~~~~~l~~~l~~----~~~vll~G~pGtGKT~la~~la~~~~~~~~~i~~~~~~~~~~l~g~~~~~~~~~~~~~~~ 105 (331)
T 2r44_A 30 VGQKYMINRLLIGICT----GGHILLEGVPGLAKTLSVNTLAKTMDLDFHRIQFTPDLLPSDLIGTMIYNQHKGNFEVKK 105 (331)
T ss_dssp CSCHHHHHHHHHHHHH----TCCEEEESCCCHHHHHHHHHHHHHTTCCEEEEECCTTCCHHHHHEEEEEETTTTEEEEEE
T ss_pred eCcHHHHHHHHHHHHc----CCeEEEECCCCCcHHHHHHHHHHHhCCCeEEEecCCCCChhhcCCceeecCCCCceEecc
Confidence 4455555554444432 23447888887775 488999999998876654211100000000000011122333333
Q ss_pred cccCCCCeEEEEeCccCch-HHHHHHHHHHHH
Q 030119 117 GAVESAERALVVDDLIATG-GTLCAAINLLER 147 (182)
Q Consensus 117 ~~~~~gk~VLlVDDvitTG-~Tl~~~~~~L~~ 147 (182)
+.+ ...||++||+=... .+.....+.+.+
T Consensus 106 g~l--~~~vl~iDEi~~~~~~~~~~Ll~~l~~ 135 (331)
T 2r44_A 106 GPV--FSNFILADEVNRSPAKVQSALLECMQE 135 (331)
T ss_dssp CTT--CSSEEEEETGGGSCHHHHHHHHHHHHH
T ss_pred Ccc--cccEEEEEccccCCHHHHHHHHHHHhc
Confidence 333 24699999986544 445555566654
No 98
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=32.62 E-value=80 Score=21.05 Aligned_cols=28 Identities=25% Similarity=0.294 Sum_probs=16.1
Q ss_pred CCCeEEEEeCccCchHHHHHHHHHHHHcCCe
Q 030119 121 SAERALVVDDLIATGGTLCAAINLLERVGAE 151 (182)
Q Consensus 121 ~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~ 151 (182)
+..+||||||--.. .....+.|.+.|..
T Consensus 6 ~~~~ILivdd~~~~---~~~l~~~L~~~g~~ 33 (154)
T 3gt7_A 6 RAGEILIVEDSPTQ---AEHLKHILEETGYQ 33 (154)
T ss_dssp -CCEEEEECSCHHH---HHHHHHHHHTTTCE
T ss_pred CCCcEEEEeCCHHH---HHHHHHHHHHCCCE
Confidence 35678888885444 33444455555654
No 99
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=32.50 E-value=69 Score=25.36 Aligned_cols=37 Identities=14% Similarity=0.109 Sum_probs=24.3
Q ss_pred HHHHHhcCCCCcEEEEeCCCchhhHHHHHHHhCCCeeee
Q 030119 50 MFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKFVPL 88 (182)
Q Consensus 50 ~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~~p~~~~ 88 (182)
.+...++..++|+|++-. ....+..+|+.+++|++..
T Consensus 114 ~l~~~~~~~~pDlVv~d~--~~~~~~~~a~~~giP~v~~ 150 (398)
T 4fzr_A 114 EALALAERWKPDLVLTET--YSLTGPLVAATLGIPWIEQ 150 (398)
T ss_dssp HHHHHHHHHCCSEEEEET--TCTHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHhCCCCEEEECc--cccHHHHHHHhhCCCEEEe
Confidence 334444444799998644 2244677788899998764
No 100
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=31.47 E-value=89 Score=20.03 Aligned_cols=29 Identities=31% Similarity=0.311 Sum_probs=17.0
Q ss_pred CCCeEEEEeCccCchHHHHHHHHHHHHcCCeE
Q 030119 121 SAERALVVDDLIATGGTLCAAINLLERVGAEV 152 (182)
Q Consensus 121 ~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~ 152 (182)
...+||||||--.... ...+.|.+.|..+
T Consensus 6 ~~~~ilivdd~~~~~~---~l~~~L~~~g~~v 34 (136)
T 3hdv_A 6 ARPLVLVVDDNAVNRE---ALILYLKSRGIDA 34 (136)
T ss_dssp -CCEEEEECSCHHHHH---HHHHHHHHTTCCE
T ss_pred CCCeEEEECCCHHHHH---HHHHHHHHcCceE
Confidence 3567999998655433 3444455556543
No 101
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=30.96 E-value=88 Score=19.24 Aligned_cols=33 Identities=15% Similarity=0.280 Sum_probs=30.3
Q ss_pred cCCCCeEEEEeCccCchHHHHHHHHHHHHcCCe
Q 030119 119 VESAERALVVDDLIATGGTLCAAINLLERVGAE 151 (182)
Q Consensus 119 ~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~ 151 (182)
+..|+.|+=|++.-.+|.|..++.+.+++.+..
T Consensus 40 L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~ 72 (88)
T 3e17_A 40 LHEGDIILKINGTVTENMSLTDARKLIEKSRGK 72 (88)
T ss_dssp CCTTCEEEEETTEECTTCCHHHHHHHHHHTTTE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 778999999999999999999999999998764
No 102
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=30.93 E-value=54 Score=26.60 Aligned_cols=30 Identities=17% Similarity=-0.020 Sum_probs=23.4
Q ss_pred CCCCcEEEEeCCCchhhHHHHHHHhCCCeeee
Q 030119 57 GKNISVVAGIEARGFIFGPPIALAIGAKFVPL 88 (182)
Q Consensus 57 ~~~~d~Iv~v~~~G~~~a~~la~~l~~p~~~~ 88 (182)
+.++|+|++-. ++..+..+|+.+|+|++..
T Consensus 142 ~~~pDlVv~d~--~~~~~~~aA~~lgiP~v~~ 171 (441)
T 2yjn_A 142 KWRPDLVIWEP--LTFAAPIAAAVTGTPHARL 171 (441)
T ss_dssp HHCCSEEEECT--TCTHHHHHHHHHTCCEEEE
T ss_pred hcCCCEEEecC--cchhHHHHHHHcCCCEEEE
Confidence 34799998764 3467888999999998775
No 103
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=30.22 E-value=77 Score=25.60 Aligned_cols=42 Identities=10% Similarity=-0.080 Sum_probs=28.1
Q ss_pred HHHHHHHHhcCCCCcEEEEeCCCchhhH-HHHHHHhCCCeeee
Q 030119 47 TIDMFVERYKGKNISVVAGIEARGFIFG-PPIALAIGAKFVPL 88 (182)
Q Consensus 47 l~~~la~~~~~~~~d~Iv~v~~~G~~~a-~~la~~l~~p~~~~ 88 (182)
+...+.+.+...+||+|+........++ ...|..+++|++..
T Consensus 99 ~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~ 141 (396)
T 3dzc_A 99 ILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVGHV 141 (396)
T ss_dssp HHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCCEEEE
T ss_pred HHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCCEEEE
Confidence 3344455555558999999876555444 55667789998765
No 104
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=30.17 E-value=58 Score=25.13 Aligned_cols=40 Identities=8% Similarity=-0.135 Sum_probs=27.1
Q ss_pred HHHHHHHhcCCCCcEEEEeCCC----chhhHHHHHHHhCCCeee
Q 030119 48 IDMFVERYKGKNISVVAGIEAR----GFIFGPPIALAIGAKFVP 87 (182)
Q Consensus 48 ~~~la~~~~~~~~d~Iv~v~~~----G~~~a~~la~~l~~p~~~ 87 (182)
+..|+..+++.++|+|+.-... |-.++..+|..||.|.+.
T Consensus 105 A~~La~~i~~~~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt 148 (255)
T 1efv_B 105 ARVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGT 148 (255)
T ss_dssp HHHHHHHHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHhcCCCEEEEeCcccCCchhhHHHHHHHHhCCCccc
Confidence 3444444433368887766532 457999999999999865
No 105
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=30.15 E-value=58 Score=25.22 Aligned_cols=41 Identities=12% Similarity=-0.044 Sum_probs=27.8
Q ss_pred HHHHHHHhcCCCCcEEEEeCCC----chhhHHHHHHHhCCCeeee
Q 030119 48 IDMFVERYKGKNISVVAGIEAR----GFIFGPPIALAIGAKFVPL 88 (182)
Q Consensus 48 ~~~la~~~~~~~~d~Iv~v~~~----G~~~a~~la~~l~~p~~~~ 88 (182)
+..|+..+++.++|+|+.-... |-.++..+|..|+.|.+.-
T Consensus 101 a~~La~~i~~~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~ 145 (264)
T 1o97_C 101 GRILTEVIKKEAPDMVFAGVQSSDQAYASTGISVASYLNWPHAAV 145 (264)
T ss_dssp HHHHHHHHHHHCCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCchhhHHHHHHHHhCCCcccc
Confidence 4444444433368988766532 4579999999999998753
No 106
>1o63_A ATP phosphoribosyltransferase; structural genomics; 2.00A {Thermotoga maritima} SCOP: c.94.1.1 PDB: 1o64_A 1usy_E* 1usy_H*
Probab=30.10 E-value=15 Score=28.00 Aligned_cols=13 Identities=38% Similarity=0.486 Sum_probs=10.4
Q ss_pred EeCccCchHHHHH
Q 030119 128 VDDLIATGGTLCA 140 (182)
Q Consensus 128 VDDvitTG~Tl~~ 140 (182)
|=|++.||+||++
T Consensus 146 IvDivsTG~TLra 158 (219)
T 1o63_A 146 IVDITETGRTLKE 158 (219)
T ss_dssp EEEEESSSHHHHH
T ss_pred eEEeeccHHHHHH
Confidence 3489999999864
No 107
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=30.07 E-value=75 Score=20.11 Aligned_cols=26 Identities=35% Similarity=0.437 Sum_probs=13.5
Q ss_pred CCeEEEEeCccCchHHHHHHHHHHHHcCC
Q 030119 122 AERALVVDDLIATGGTLCAAINLLERVGA 150 (182)
Q Consensus 122 gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga 150 (182)
..+||||||--... ....+.|++.|.
T Consensus 3 ~~~ilivdd~~~~~---~~l~~~L~~~g~ 28 (127)
T 3i42_A 3 LQQALIVEDYQAAA---ETFKELLEMLGF 28 (127)
T ss_dssp CEEEEEECSCHHHH---HHHHHHHHHTTE
T ss_pred cceEEEEcCCHHHH---HHHHHHHHHcCC
Confidence 34678887754433 333344445453
No 108
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=29.92 E-value=82 Score=25.53 Aligned_cols=45 Identities=11% Similarity=-0.026 Sum_probs=32.3
Q ss_pred cCCHHHHHHHHHHHHHHhcCCCCcEEEEeCCCchhhHHHHHHHhCCCe
Q 030119 38 LLKPKEFKDTIDMFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKF 85 (182)
Q Consensus 38 ~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~~p~ 85 (182)
+.+++.+...+..++.. ..+|.|++....+...++.+++.||+|.
T Consensus 57 ~~d~~~~~~~~~~~~~~---~~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 57 FEDEEAAMDVVRQTFVE---FPFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp TTCHHHHHHHHHHHHHH---SCCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred CCCHHHHHHHHHHhhhh---cCCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 45666555544544443 3689999888888888999999998874
No 109
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=29.76 E-value=78 Score=20.83 Aligned_cols=28 Identities=36% Similarity=0.417 Sum_probs=13.7
Q ss_pred CCCeEEEEeCccCchHHHHHHHHHHHHcCCe
Q 030119 121 SAERALVVDDLIATGGTLCAAINLLERVGAE 151 (182)
Q Consensus 121 ~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~ 151 (182)
.+.+||||||--... ....+.|.+.|..
T Consensus 13 ~~~~iLivdd~~~~~---~~l~~~L~~~g~~ 40 (143)
T 3m6m_D 13 RSMRMLVADDHEANR---MVLQRLLEKAGHK 40 (143)
T ss_dssp --CEEEEECSSHHHH---HHHHHHHHC--CE
T ss_pred ccceEEEEeCCHHHH---HHHHHHHHHcCCe
Confidence 456788888854443 3334444555543
No 110
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=29.67 E-value=93 Score=19.13 Aligned_cols=33 Identities=6% Similarity=0.149 Sum_probs=29.6
Q ss_pred ccCCCCeEEEEeCccCchHHHHHHHHHHHHcCC
Q 030119 118 AVESAERALVVDDLIATGGTLCAAINLLERVGA 150 (182)
Q Consensus 118 ~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga 150 (182)
.+..|+.|+=||..-.+|.|..++.+.|++.+.
T Consensus 43 gL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~ 75 (88)
T 1kwa_A 43 TLHVGDEIREINGISVANQTVEQLQKMLREMRG 75 (88)
T ss_dssp CCCTTCEEEEETTEEGGGSCHHHHHHHHHHCCE
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHhcCCC
Confidence 467899999999999999999999999998754
No 111
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=29.66 E-value=73 Score=20.41 Aligned_cols=27 Identities=37% Similarity=0.401 Sum_probs=15.3
Q ss_pred CCeEEEEeCccCchHHHHHHHHHHHHcCCe
Q 030119 122 AERALVVDDLIATGGTLCAAINLLERVGAE 151 (182)
Q Consensus 122 gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~ 151 (182)
..+||||||=-.... ...+.|++.|..
T Consensus 5 ~~~iLivdd~~~~~~---~l~~~L~~~g~~ 31 (129)
T 3h1g_A 5 SMKLLVVDDSSTMRR---IIKNTLSRLGYE 31 (129)
T ss_dssp -CCEEEECSCHHHHH---HHHHHHHHTTCC
T ss_pred CcEEEEEeCCHHHHH---HHHHHHHHcCCc
Confidence 457888888654433 334445555643
No 112
>1ve4_A ATP phosphoribosyltransferase; riken structural genomics/proteomics initiative structural genomics; 1.20A {Thermus thermophilus} SCOP: c.94.1.1
Probab=29.33 E-value=16 Score=27.59 Aligned_cols=20 Identities=45% Similarity=0.532 Sum_probs=14.2
Q ss_pred EeCccCchHHHHHHHHHHHHcCCeEEE
Q 030119 128 VDDLIATGGTLCAAINLLERVGAEVVE 154 (182)
Q Consensus 128 VDDvitTG~Tl~~~~~~L~~~Ga~~v~ 154 (182)
|=|++.||+|++ +.|-+++.
T Consensus 151 IvDivsTG~TLr-------aNgL~~ie 170 (206)
T 1ve4_A 151 VVDVVQTGATLR-------AAGLVEVE 170 (206)
T ss_dssp EEEEESSSHHHH-------HTTCEEEE
T ss_pred EEEeccCHHHHH-------HCCCEEeE
Confidence 338999999985 45666543
No 113
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=28.86 E-value=77 Score=20.95 Aligned_cols=27 Identities=22% Similarity=0.155 Sum_probs=17.0
Q ss_pred CCCeEEEEeCccCchHHHHHHHHHHHHcCC
Q 030119 121 SAERALVVDDLIATGGTLCAAINLLERVGA 150 (182)
Q Consensus 121 ~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga 150 (182)
++.+||||||--.. .....+.|.+.|.
T Consensus 14 ~~~~iLivdd~~~~---~~~l~~~L~~~~~ 40 (152)
T 3eul_A 14 EKVRVVVGDDHPLF---REGVVRALSLSGS 40 (152)
T ss_dssp CCEEEEEECSSHHH---HHHHHHHHHHHSS
T ss_pred ceEEEEEEcCCHHH---HHHHHHHHhhCCC
Confidence 67789999985444 3444455555663
No 114
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=28.71 E-value=63 Score=23.18 Aligned_cols=27 Identities=33% Similarity=0.453 Sum_probs=17.9
Q ss_pred CCCeEEEEeCccCchHHHHHHHHHHHHcCC
Q 030119 121 SAERALVVDDLIATGGTLCAAINLLERVGA 150 (182)
Q Consensus 121 ~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga 150 (182)
.+.+||||||=-.. ...+.+.|++.|.
T Consensus 60 ~~~~ILiVdDd~~~---~~~l~~~L~~~g~ 86 (206)
T 3mm4_A 60 RGKRVLVVDDNFIS---RKVATGKLKKMGV 86 (206)
T ss_dssp TTCEEEEECSCHHH---HHHHHHHHHHTTC
T ss_pred CCCEEEEEeCCHHH---HHHHHHHHHHcCC
Confidence 67899999996544 3344455556665
No 115
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=28.42 E-value=82 Score=21.83 Aligned_cols=33 Identities=12% Similarity=0.140 Sum_probs=23.2
Q ss_pred CCc-EEEEeCC-----Cc------hhhHHHHHHHhCCCeeeeecC
Q 030119 59 NIS-VVAGIEA-----RG------FIFGPPIALAIGAKFVPLRKP 91 (182)
Q Consensus 59 ~~d-~Iv~v~~-----~G------~~~a~~la~~l~~p~~~~~k~ 91 (182)
+++ +|||.|. .| -.|+..|...+++|+.+...+
T Consensus 53 ~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~~lpV~~~DER 97 (138)
T 1nu0_A 53 QPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDER 97 (138)
T ss_dssp CCSEEEEEEEECTTSCBCHHHHHHHHHHHHHHHHHCCCEEEEEEE
T ss_pred CCCEEEEecccCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCC
Confidence 344 7888872 22 358888888889999887543
No 116
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=28.29 E-value=1.1e+02 Score=20.10 Aligned_cols=34 Identities=21% Similarity=0.297 Sum_probs=30.8
Q ss_pred ccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCe
Q 030119 118 AVESAERALVVDDLIATGGTLCAAINLLERVGAE 151 (182)
Q Consensus 118 ~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~ 151 (182)
.+..|..|+=|++.-.++.|...+...++..|..
T Consensus 71 gL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~~ 104 (120)
T 2iwo_A 71 KLRVGDRIVTICGTSTEGMTHTQAVNLLKNASGS 104 (120)
T ss_dssp CCCTTCEEEEETTEECTTCBHHHHHHHHHHCCSE
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 5678999999999999999999999999998765
No 117
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=28.22 E-value=80 Score=25.62 Aligned_cols=42 Identities=10% Similarity=-0.035 Sum_probs=28.9
Q ss_pred HHHHHHHHhcCCCCcEEEEeCCCchhhH-HHHHHHhCCCeeee
Q 030119 47 TIDMFVERYKGKNISVVAGIEARGFIFG-PPIALAIGAKFVPL 88 (182)
Q Consensus 47 l~~~la~~~~~~~~d~Iv~v~~~G~~~a-~~la~~l~~p~~~~ 88 (182)
+...+.+.+...+||+|+........++ ...|..+++|++..
T Consensus 102 ~~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~ 144 (403)
T 3ot5_A 102 VMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLGHV 144 (403)
T ss_dssp HHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCCEEEE
Confidence 3444555555558999999876555553 56677889998765
No 118
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=27.71 E-value=1e+02 Score=23.79 Aligned_cols=36 Identities=28% Similarity=0.388 Sum_probs=28.8
Q ss_pred CCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeecC
Q 030119 121 SAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELPD 163 (182)
Q Consensus 121 ~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~~ 163 (182)
.++++|| +-+|++.++++-.|.+.|+..+ +++++..
T Consensus 124 ~~~~~li----lGaGGaarai~~aL~~~g~~~i---~i~nRt~ 159 (269)
T 3tum_A 124 AGKRALV----IGCGGVGSAIAYALAEAGIASI---TLCDPST 159 (269)
T ss_dssp TTCEEEE----ECCSHHHHHHHHHHHHTTCSEE---EEECSCH
T ss_pred ccCeEEE----EecHHHHHHHHHHHHHhCCCeE---EEeCCCH
Confidence 7899986 5899999999999999998754 3446543
No 119
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=27.47 E-value=56 Score=25.11 Aligned_cols=40 Identities=8% Similarity=0.072 Sum_probs=26.9
Q ss_pred HHHHHHhcCCCCcEEEEeCCC----chhhHHHHHHHhCCCeeee
Q 030119 49 DMFVERYKGKNISVVAGIEAR----GFIFGPPIALAIGAKFVPL 88 (182)
Q Consensus 49 ~~la~~~~~~~~d~Iv~v~~~----G~~~a~~la~~l~~p~~~~ 88 (182)
..|+..+++.++|+|+.-... |-.++..+|..||.|.+.-
T Consensus 103 ~~La~~i~~~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~ 146 (252)
T 1efp_B 103 KILAAVARAEGTELIIAGKQAIDNDMNATGQMLAAILGWAQATF 146 (252)
T ss_dssp HHHHHHHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHhcCCCEEEEcCCccCCchhhHHHHHHHHhCCCcccc
Confidence 344443333368887766532 4579999999999998653
No 120
>1z7m_E ATP phosphoribosyltransferase; ATP-PRT, histidine biosynthesis, hiszg, alloste evolution; 2.90A {Lactococcus lactis} SCOP: c.94.1.1 PDB: 1z7n_E*
Probab=27.42 E-value=14 Score=27.84 Aligned_cols=20 Identities=45% Similarity=0.720 Sum_probs=14.4
Q ss_pred EeCccCchHHHHHHHHHHHHcCCeEEE
Q 030119 128 VDDLIATGGTLCAAINLLERVGAEVVE 154 (182)
Q Consensus 128 VDDvitTG~Tl~~~~~~L~~~Ga~~v~ 154 (182)
|=|++.||+|++ +.|-+++.
T Consensus 153 IvDivsTG~TLr-------~NgL~~ie 172 (208)
T 1z7m_E 153 IVDIVETGNTLS-------ANGLEVIE 172 (208)
T ss_dssp EEEEESSSHHHH-------TTTCEEEE
T ss_pred EEEEeCChHHHH-------HCCCEEeE
Confidence 348999999975 46766653
No 121
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=27.40 E-value=79 Score=20.39 Aligned_cols=28 Identities=21% Similarity=0.281 Sum_probs=18.3
Q ss_pred CCCeEEEEeCccCchHHHHHHHHHHHHcCCe
Q 030119 121 SAERALVVDDLIATGGTLCAAINLLERVGAE 151 (182)
Q Consensus 121 ~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~ 151 (182)
.+.+||||||--.....+ .+.|...|..
T Consensus 17 ~~~~ilivdd~~~~~~~l---~~~L~~~g~~ 44 (137)
T 2pln_A 17 GSMRVLLIEKNSVLGGEI---EKGLNVKGFM 44 (137)
T ss_dssp TCSEEEEECSCHHHHHHH---HHHHHHTTCE
T ss_pred CCCeEEEEeCCHHHHHHH---HHHHHHcCcE
Confidence 678899999976654444 4444555654
No 122
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=26.80 E-value=90 Score=19.21 Aligned_cols=35 Identities=6% Similarity=0.168 Sum_probs=30.3
Q ss_pred ccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeE
Q 030119 118 AVESAERALVVDDLIATGGTLCAAINLLERVGAEV 152 (182)
Q Consensus 118 ~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~ 152 (182)
.+..|+.|+=||+.-.++.+...+.+.|+..+..+
T Consensus 46 Gl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~ 80 (95)
T 3r68_A 46 GLKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQT 80 (95)
T ss_dssp TCCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEE
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 36789999999999999989999999999977654
No 123
>1dcf_A ETR1 protein; beta-alpha five sandwich, transferase; 2.50A {Arabidopsis thaliana} SCOP: c.23.1.2
Probab=26.66 E-value=84 Score=20.21 Aligned_cols=28 Identities=25% Similarity=0.281 Sum_probs=17.8
Q ss_pred CCCeEEEEeCccCchHHHHHHHHHHHHcCCe
Q 030119 121 SAERALVVDDLIATGGTLCAAINLLERVGAE 151 (182)
Q Consensus 121 ~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~ 151 (182)
++.+||||||--.....+. ..|...|..
T Consensus 6 ~~~~ILivdd~~~~~~~l~---~~L~~~g~~ 33 (136)
T 1dcf_A 6 TGLKVLVMDENGVSRMVTK---GLLVHLGCE 33 (136)
T ss_dssp TTCEEEEECSCHHHHHHHH---HHHHHTTCE
T ss_pred CCCeEEEEeCCHHHHHHHH---HHHHHcCCe
Confidence 5678999999766544443 444455654
No 124
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=26.59 E-value=89 Score=20.18 Aligned_cols=29 Identities=17% Similarity=0.165 Sum_probs=17.2
Q ss_pred CCCeEEEEeCccCchHHHHHHHHHHHHcCCeE
Q 030119 121 SAERALVVDDLIATGGTLCAAINLLERVGAEV 152 (182)
Q Consensus 121 ~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~ 152 (182)
...+||||||=-... ....+.|++.|..+
T Consensus 5 ~~~~ilivdd~~~~~---~~l~~~L~~~g~~v 33 (136)
T 3kto_A 5 HHPIIYLVDHQKDAR---AALSKLLSPLDVTI 33 (136)
T ss_dssp --CEEEEECSCHHHH---HHHHHHHTTSSSEE
T ss_pred CCCeEEEEcCCHHHH---HHHHHHHHHCCcEE
Confidence 346899999965543 44445556666543
No 125
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=25.68 E-value=1.2e+02 Score=18.48 Aligned_cols=35 Identities=11% Similarity=0.066 Sum_probs=30.0
Q ss_pred ccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeE
Q 030119 118 AVESAERALVVDDLIATGGTLCAAINLLERVGAEV 152 (182)
Q Consensus 118 ~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~ 152 (182)
.+..|+.|+=||+.-.++.+..++.+.+++.+..+
T Consensus 44 GL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~ 78 (91)
T 1g9o_A 44 GLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAV 78 (91)
T ss_dssp TCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEE
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcE
Confidence 36789999999999999988999999999876553
No 126
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=25.23 E-value=1e+02 Score=19.83 Aligned_cols=26 Identities=4% Similarity=-0.045 Sum_probs=17.4
Q ss_pred CCCeEEEEeCccCchHHHHHHHHHHHHcC
Q 030119 121 SAERALVVDDLIATGGTLCAAINLLERVG 149 (182)
Q Consensus 121 ~gk~VLlVDDvitTG~Tl~~~~~~L~~~G 149 (182)
...+||||||=-.. .....+.|++.|
T Consensus 13 ~~~~ilivdd~~~~---~~~l~~~L~~~g 38 (135)
T 3snk_A 13 KRKQVALFSSDPNF---KRDVATRLDALA 38 (135)
T ss_dssp CCEEEEEECSCHHH---HHHHHHHHHHTS
T ss_pred CCcEEEEEcCCHHH---HHHHHHHHhhcC
Confidence 45689999996555 444455566666
No 127
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=25.22 E-value=1.3e+02 Score=23.79 Aligned_cols=35 Identities=17% Similarity=-0.051 Sum_probs=22.9
Q ss_pred HhcCCCCcEEEEeCCCchhhHHHHHHHhCCCeeee
Q 030119 54 RYKGKNISVVAGIEARGFIFGPPIALAIGAKFVPL 88 (182)
Q Consensus 54 ~~~~~~~d~Iv~v~~~G~~~a~~la~~l~~p~~~~ 88 (182)
.+++.++|+|++...---..+...|+.+++|++..
T Consensus 87 ~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 87 VIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp HHHHHCCSEEEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred HHHhcCCCEEEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 34445899999864322234455578889999864
No 128
>3kyj_B CHEY6 protein, putative histidine protein kinase; protein-protein interaction, histidine kinase, response regulator, phosphorylation; 1.40A {Rhodobacter sphaeroides} PDB: 3kyi_B*
Probab=24.97 E-value=85 Score=20.50 Aligned_cols=25 Identities=16% Similarity=0.223 Sum_probs=14.6
Q ss_pred CCCeEEEEeCccCchHHHHHHHHHHHHc
Q 030119 121 SAERALVVDDLIATGGTLCAAINLLERV 148 (182)
Q Consensus 121 ~gk~VLlVDDvitTG~Tl~~~~~~L~~~ 148 (182)
++.+|||+||--.. .....+.|++.
T Consensus 12 ~~~~vlivdd~~~~---~~~l~~~L~~~ 36 (145)
T 3kyj_B 12 SPYNVMIVDDAAMM---RLYIASFIKTL 36 (145)
T ss_dssp CSEEEEEECSCHHH---HHHHHHHHTTC
T ss_pred CCCeEEEEcCCHHH---HHHHHHHHHhC
Confidence 45678888885443 33444445555
No 129
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=24.83 E-value=97 Score=19.25 Aligned_cols=27 Identities=30% Similarity=0.455 Sum_probs=14.7
Q ss_pred CCeEEEEeCccCchHHHHHHHHHHHHcCCe
Q 030119 122 AERALVVDDLIATGGTLCAAINLLERVGAE 151 (182)
Q Consensus 122 gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~ 151 (182)
+.+|+||||=-.....+ .+.|...|..
T Consensus 2 ~~~ilivdd~~~~~~~l---~~~l~~~g~~ 28 (120)
T 1tmy_A 2 GKRVLIVDDAAFMRMML---KDIITKAGYE 28 (120)
T ss_dssp CCEEEEECSCHHHHHHH---HHHHHHTTCE
T ss_pred CceEEEEcCcHHHHHHH---HHHHhhcCcE
Confidence 35688888855443333 3334455654
No 130
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=24.37 E-value=1.4e+02 Score=19.25 Aligned_cols=40 Identities=8% Similarity=0.169 Sum_probs=23.2
Q ss_pred HHHHHHhcCCCCc-EEEEeCC--Cc---------hhhHHHHHHHhCCCeeeee
Q 030119 49 DMFVERYKGKNIS-VVAGIEA--RG---------FIFGPPIALAIGAKFVPLR 89 (182)
Q Consensus 49 ~~la~~~~~~~~d-~Iv~v~~--~G---------~~~a~~la~~l~~p~~~~~ 89 (182)
..+.+.+.+.+++ +|||.|. .| -.|+..|... ++|+.+..
T Consensus 41 ~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~-~lpV~~~D 92 (98)
T 1iv0_A 41 EALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEALRAR-GVEVELWD 92 (98)
T ss_dssp HHHHHHHHHHTCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHT-TCEEEEEC
T ss_pred HHHHHHHHHcCCCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcC-CCCEEEEC
Confidence 3333333333444 7889872 12 2467777776 78887764
No 131
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=24.15 E-value=1.9e+02 Score=22.93 Aligned_cols=32 Identities=9% Similarity=-0.035 Sum_probs=23.7
Q ss_pred CCCCcEEEEeCCCchhh--HHHHHHHhCCCeeeee
Q 030119 57 GKNISVVAGIEARGFIF--GPPIALAIGAKFVPLR 89 (182)
Q Consensus 57 ~~~~d~Iv~v~~~G~~~--a~~la~~l~~p~~~~~ 89 (182)
..++|+|++-.. .... +..+|+.+|+|.+...
T Consensus 91 ~~~pD~vi~d~~-~~~~~~~~~~A~~lgiP~v~~~ 124 (415)
T 1iir_A 91 AEGCAAVVTTGL-LAAAIGVRSVAEKLGIPYFYAF 124 (415)
T ss_dssp TTTCSEEEEESC-HHHHHHHHHHHHHHTCCEEEEE
T ss_pred hcCCCEEEECCh-hHhHhhHHHHHHHhCCCEEEEe
Confidence 358999887553 3345 7889999999998764
No 132
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=24.02 E-value=1e+02 Score=19.28 Aligned_cols=16 Identities=19% Similarity=0.243 Sum_probs=9.0
Q ss_pred CeEEEEeCccCchHHH
Q 030119 123 ERALVVDDLIATGGTL 138 (182)
Q Consensus 123 k~VLlVDDvitTG~Tl 138 (182)
++||||||--.....+
T Consensus 2 ~~ilivdd~~~~~~~l 17 (124)
T 1mb3_A 2 KKVLIVEDNELNMKLF 17 (124)
T ss_dssp CEEEEECSCHHHHHHH
T ss_pred cEEEEEcCCHHHHHHH
Confidence 4677777755443333
No 133
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=23.85 E-value=1.6e+02 Score=19.23 Aligned_cols=31 Identities=23% Similarity=0.297 Sum_probs=27.8
Q ss_pred ccCCCCeEEEEeCccCchHHHHHHHHHHHHc
Q 030119 118 AVESAERALVVDDLIATGGTLCAAINLLERV 148 (182)
Q Consensus 118 ~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~ 148 (182)
.+..|.+|+=|++.-.++.|..++.+.|++.
T Consensus 61 gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~ 91 (118)
T 1v6b_A 61 GVVKGDEIMAINGKIVTDYTLAEAEAALQKA 91 (118)
T ss_dssp SSCTTCEEEEESSCBCTTCBHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHHh
Confidence 5778999999999999999999999999865
No 134
>3fet_A Electron transfer flavoprotein subunit alpha RELA protein; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: MSE; 2.05A {Thermoplasma acidophilum}
Probab=23.83 E-value=1.1e+02 Score=21.70 Aligned_cols=42 Identities=10% Similarity=-0.054 Sum_probs=30.4
Q ss_pred HHHHHHHHHHhcCCCCcEEEEeC-CCchhhHHHHHHHhCCCeeee
Q 030119 45 KDTIDMFVERYKGKNISVVAGIE-ARGFIFGPPIALAIGAKFVPL 88 (182)
Q Consensus 45 ~~l~~~la~~~~~~~~d~Iv~v~-~~G~~~a~~la~~l~~p~~~~ 88 (182)
...++.+++.++ ++|+|+... ..|-.++..+|..|+.|.+.-
T Consensus 57 e~~a~~l~~~~~--~p~~Vl~g~t~~g~~vaprlAa~L~~~~~sd 99 (166)
T 3fet_A 57 DAVSEGILKIAG--NYDYIAIGSTEVGREIAGYLSFKTGFYTATE 99 (166)
T ss_dssp HHHHHHHHHHHT--TCSEEEEECSHHHHHHHHHHHHHHCCCEEEE
T ss_pred HHHHHHHHHHHc--CCCEEEEcCCCccccHHHHHHHHhCCCceee
Confidence 355666666665 688776554 455679999999999998653
No 135
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=23.75 E-value=1.2e+02 Score=23.93 Aligned_cols=35 Identities=11% Similarity=0.147 Sum_probs=28.1
Q ss_pred CCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeec
Q 030119 121 SAERALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELP 162 (182)
Q Consensus 121 ~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~ 162 (182)
++++++|+ -+|++-++++..|.+.|++.+ ++++|.
T Consensus 147 ~gk~~lVl----GAGGaaraia~~L~~~G~~~v---~v~nRt 181 (312)
T 3t4e_A 147 RGKTMVLL----GAGGAATAIGAQAAIEGIKEI---KLFNRK 181 (312)
T ss_dssp TTCEEEEE----CCSHHHHHHHHHHHHTTCSEE---EEEECS
T ss_pred CCCEEEEE----CcCHHHHHHHHHHHHcCCCEE---EEEECC
Confidence 78999985 579999999999999998654 345655
No 136
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=23.44 E-value=1.4e+02 Score=18.39 Aligned_cols=25 Identities=24% Similarity=0.303 Sum_probs=13.2
Q ss_pred eEEEEeCccCchHHHHHHHHHHHHcCCe
Q 030119 124 RALVVDDLIATGGTLCAAINLLERVGAE 151 (182)
Q Consensus 124 ~VLlVDDvitTG~Tl~~~~~~L~~~Ga~ 151 (182)
+|+||||--.....+ ...|...|..
T Consensus 3 ~ilivdd~~~~~~~l---~~~l~~~~~~ 27 (120)
T 2a9o_A 3 KILIVDDEKPISDII---KFNMTKEGYE 27 (120)
T ss_dssp EEEEECSCHHHHHHH---HHHHHHTTCE
T ss_pred eEEEEcCCHHHHHHH---HHHHHhcCcE
Confidence 678888754443333 3344445543
No 137
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=23.19 E-value=1.1e+02 Score=19.82 Aligned_cols=27 Identities=26% Similarity=0.218 Sum_probs=15.3
Q ss_pred CCeEEEEeCccCchHHHHHHHHHHHHcCCe
Q 030119 122 AERALVVDDLIATGGTLCAAINLLERVGAE 151 (182)
Q Consensus 122 gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~ 151 (182)
..+||||||--..... ....|++.|..
T Consensus 4 ~~~iLivdd~~~~~~~---l~~~L~~~g~~ 30 (136)
T 3t6k_A 4 PHTLLIVDDDDTVAEM---LELVLRGAGYE 30 (136)
T ss_dssp CCEEEEECSCHHHHHH---HHHHHHHTTCE
T ss_pred CCEEEEEeCCHHHHHH---HHHHHHHCCCE
Confidence 4578888886544333 33444555544
No 138
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=23.18 E-value=99 Score=20.46 Aligned_cols=35 Identities=17% Similarity=0.112 Sum_probs=25.9
Q ss_pred CCCeEEEEeCccCc-hHHHHHHHHHHHHcCCeEEEE
Q 030119 121 SAERALVVDDLIAT-GGTLCAAINLLERVGAEVVEC 155 (182)
Q Consensus 121 ~gk~VLlVDDvitT-G~Tl~~~~~~L~~~Ga~~v~~ 155 (182)
+|+++.++-=--.+ |.++..+.+.|++.|+++++-
T Consensus 78 ~~k~~~~f~t~g~~~~~a~~~l~~~l~~~G~~~v~~ 113 (138)
T 5nul_A 78 SGKKVALFGSYGWGDGKWMRDFEERMNGYGCVVVET 113 (138)
T ss_dssp TTCEEEEEEEESSSCSHHHHHHHHHHHHTTCEECSC
T ss_pred CCCEEEEEEecCCCCChHHHHHHHHHHHCCCEEECC
Confidence 67777776522122 788999999999999998853
No 139
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=23.13 E-value=1.1e+02 Score=19.85 Aligned_cols=29 Identities=17% Similarity=0.242 Sum_probs=23.5
Q ss_pred CCC-CeEEEEeCccCchHHHHHHHHHHHHcCC
Q 030119 120 ESA-ERALVVDDLIATGGTLCAAINLLERVGA 150 (182)
Q Consensus 120 ~~g-k~VLlVDDvitTG~Tl~~~~~~L~~~Ga 150 (182)
.++ +.|+++.+ .+|..-..++..|+..|-
T Consensus 86 ~~~~~~ivvyC~--~~G~rs~~a~~~L~~~G~ 115 (134)
T 3g5j_A 86 ALNYDNIVIYCA--RGGMRSGSIVNLLSSLGV 115 (134)
T ss_dssp HTTCSEEEEECS--SSSHHHHHHHHHHHHTTC
T ss_pred ccCCCeEEEEEC--CCChHHHHHHHHHHHcCC
Confidence 355 88998865 578888899999999997
No 140
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=23.09 E-value=1.2e+02 Score=19.32 Aligned_cols=31 Identities=13% Similarity=0.152 Sum_probs=25.0
Q ss_pred cCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeE
Q 030119 119 VESAERALVVDDLIATGGTLCAAINLLERVGAEV 152 (182)
Q Consensus 119 ~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~ 152 (182)
+.+++.|+++. .+|..-..++..|++.|-+.
T Consensus 53 ~~~~~~ivvyC---~~G~rs~~aa~~L~~~G~~~ 83 (110)
T 2k0z_A 53 QHKDKKVLLHC---RAGRRALDAAKSMHELGYTP 83 (110)
T ss_dssp SCSSSCEEEEC---SSSHHHHHHHHHHHHTTCCC
T ss_pred cCCCCEEEEEe---CCCchHHHHHHHHHHCCCCE
Confidence 44678898887 67888888999999999753
No 141
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=23.04 E-value=1.5e+02 Score=19.04 Aligned_cols=25 Identities=36% Similarity=0.336 Sum_probs=13.0
Q ss_pred CeEEEEeCccCchHHHHHHHHHHHHcCC
Q 030119 123 ERALVVDDLIATGGTLCAAINLLERVGA 150 (182)
Q Consensus 123 k~VLlVDDvitTG~Tl~~~~~~L~~~Ga 150 (182)
.+||||||--.. .....+.|.+.|.
T Consensus 4 ~~ilivdd~~~~---~~~l~~~l~~~g~ 28 (143)
T 3jte_A 4 AKILVIDDESTI---LQNIKFLLEIDGN 28 (143)
T ss_dssp CEEEEECSCHHH---HHHHHHHHHHTTC
T ss_pred CEEEEEcCCHHH---HHHHHHHHHhCCc
Confidence 467777774333 3334444445554
No 142
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=23.01 E-value=95 Score=20.69 Aligned_cols=30 Identities=17% Similarity=0.241 Sum_probs=27.8
Q ss_pred cCCCCeEEEEeCccCchHHHHHHHHHHHHc
Q 030119 119 VESAERALVVDDLIATGGTLCAAINLLERV 148 (182)
Q Consensus 119 ~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~ 148 (182)
+..|..|+=||+.-.++.|..++.++|+..
T Consensus 74 L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 103 (127)
T 1wg6_A 74 LRMNDQLIAVNGETLLGKSNHEAMETLRRS 103 (127)
T ss_dssp SCSCCBEEEETTEESTTSCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHHh
Confidence 778999999999999999999999999976
No 143
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=22.94 E-value=1.9e+02 Score=22.41 Aligned_cols=56 Identities=13% Similarity=0.051 Sum_probs=35.2
Q ss_pred cccccCCHHHHHHHHHHHHHHhcCCCCcEEEEeCCCchhhHHHHHHH----hCCCeeeee
Q 030119 34 ITTLLLKPKEFKDTIDMFVERYKGKNISVVAGIEARGFIFGPPIALA----IGAKFVPLR 89 (182)
Q Consensus 34 ~~~l~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~----l~~p~~~~~ 89 (182)
-+..-.+|+........+...-...++|+++-+...+..++-.-|+. -|+|++.+.
T Consensus 39 gsGaKm~pe~~~~~~~~~~~~~~~~~pDfvI~isPN~a~PGP~~ARE~l~~~~iP~IvI~ 98 (283)
T 1qv9_A 39 GTSVKMDPECVEAAVEMALDIAEDFEPDFIVYGGPNPAAPGPSKAREMLADSEYPAVIIG 98 (283)
T ss_dssp ECTTCCSHHHHHHHHHHHHHHHHHHCCSEEEEECSCTTSHHHHHHHHHHHTSSSCEEEEE
T ss_pred ccCCCCCHHHHHHHHHHhhhhhhhcCCCEEEEECCCCCCCCchHHHHHHHhCCCCEEEEc
Confidence 34456788888887766642222336887777765555554444444 489998874
No 144
>2vd3_A ATP phosphoribosyltransferase; metal-binding, glycosyltransferase, HISG, histidine, magnesi transferase; HET: HIS; 2.45A {Methanobacterium thermoautotrophicum}
Probab=22.75 E-value=25 Score=27.92 Aligned_cols=13 Identities=46% Similarity=0.583 Sum_probs=10.3
Q ss_pred EeCccCchHHHHH
Q 030119 128 VDDLIATGGTLCA 140 (182)
Q Consensus 128 VDDvitTG~Tl~~ 140 (182)
|=|++.||+|+++
T Consensus 158 IvDivsTG~TLra 170 (289)
T 2vd3_A 158 ITDLSSTGTTLRM 170 (289)
T ss_dssp EEEEESSTHHHHH
T ss_pred EEEEeCChHHHHH
Confidence 3389999999864
No 145
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=22.62 E-value=1.3e+02 Score=19.75 Aligned_cols=31 Identities=35% Similarity=0.370 Sum_probs=23.4
Q ss_pred ccCCCCeEEEEeCccCchHH--HHHHHHHHHHcCCe
Q 030119 118 AVESAERALVVDDLIATGGT--LCAAINLLERVGAE 151 (182)
Q Consensus 118 ~~~~gk~VLlVDDvitTG~T--l~~~~~~L~~~Ga~ 151 (182)
.+.+++.|+++.. +|.. ...++..|++.|-+
T Consensus 67 ~l~~~~~ivvyC~---~g~r~~s~~a~~~L~~~G~~ 99 (124)
T 3flh_A 67 ELDPAKTYVVYDW---TGGTTLGKTALLVLLSAGFE 99 (124)
T ss_dssp GSCTTSEEEEECS---SSSCSHHHHHHHHHHHHTCE
T ss_pred cCCCCCeEEEEeC---CCCchHHHHHHHHHHHcCCe
Confidence 4557888999864 5665 67788899999974
No 146
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=22.53 E-value=1.3e+02 Score=23.44 Aligned_cols=37 Identities=11% Similarity=-0.040 Sum_probs=24.3
Q ss_pred HHHHHhcCCCCcEEEEeCCCchhhHHHHHHHhCCCeeee
Q 030119 50 MFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKFVPL 88 (182)
Q Consensus 50 ~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~~p~~~~ 88 (182)
.+.+.++..++|+|+.-. . ...+...|+.+|+|++..
T Consensus 105 ~l~~~l~~~~PD~Vv~~~-~-~~~~~~aa~~~giP~v~~ 141 (391)
T 3tsa_A 105 EYLRLAEAWRPSVLLVDV-C-ALIGRVLGGLLDLPVVLH 141 (391)
T ss_dssp HHHHHHHHHCCSEEEEET-T-CHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHhcCCCEEEeCc-c-hhHHHHHHHHhCCCEEEE
Confidence 334444445899988853 2 234556778899998776
No 147
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=22.37 E-value=92 Score=20.86 Aligned_cols=28 Identities=32% Similarity=0.305 Sum_probs=19.7
Q ss_pred CCeEEEEeCccCchHHHHHHHHHHHHcCCeE
Q 030119 122 AERALVVDDLIATGGTLCAAINLLERVGAEV 152 (182)
Q Consensus 122 gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~ 152 (182)
.-|||||||--.....+... |++.|..+
T Consensus 8 ~~rILiVdD~~~~~~~l~~~---L~~~G~~v 35 (123)
T 2lpm_A 8 RLRVLVVEDESMIAMLIEDT---LCELGHEV 35 (123)
T ss_dssp CCCEEEESSSTTTSHHHHHH---HHHHCCCC
T ss_pred CCEEEEEeCCHHHHHHHHHH---HHHCCCEE
Confidence 44799999988876666554 45667654
No 148
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=22.26 E-value=79 Score=20.67 Aligned_cols=29 Identities=21% Similarity=0.212 Sum_probs=19.5
Q ss_pred CCCeEEEEeCccCchHHHHHHHHHHHHcC-CeE
Q 030119 121 SAERALVVDDLIATGGTLCAAINLLERVG-AEV 152 (182)
Q Consensus 121 ~gk~VLlVDDvitTG~Tl~~~~~~L~~~G-a~~ 152 (182)
++.+||||||=-.. .....+.|.+.| ..+
T Consensus 19 ~~~~ilivdd~~~~---~~~l~~~L~~~g~~~v 48 (146)
T 4dad_A 19 GMINILVASEDASR---LAHLARLVGDAGRYRV 48 (146)
T ss_dssp GGCEEEEECSCHHH---HHHHHHHHHHHCSCEE
T ss_pred CCCeEEEEeCCHHH---HHHHHHHHhhCCCeEE
Confidence 67899999996655 444455566667 444
No 149
>1h3d_A ATP-phosphoribosyltransferase; hisitidine biosynthesis, glycosyltransferase; HET: AMP TLA; 2.7A {Escherichia coli} SCOP: c.94.1.1 d.58.5.3 PDB: 1q1k_A*
Probab=22.16 E-value=25 Score=28.04 Aligned_cols=13 Identities=54% Similarity=0.726 Sum_probs=10.3
Q ss_pred EeCccCchHHHHH
Q 030119 128 VDDLIATGGTLCA 140 (182)
Q Consensus 128 VDDvitTG~Tl~~ 140 (182)
|=|++.||+|+++
T Consensus 167 IvDivsTG~TLra 179 (299)
T 1h3d_A 167 ICDLVSTGATLEA 179 (299)
T ss_dssp EEEEESSCHHHHH
T ss_pred EEecccCHHHHHH
Confidence 3389999999864
No 150
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=21.53 E-value=1.2e+02 Score=22.75 Aligned_cols=29 Identities=24% Similarity=0.282 Sum_probs=25.1
Q ss_pred CCCeEEEEeCccCchHHHHHHHHHHHHcCCeEE
Q 030119 121 SAERALVVDDLIATGGTLCAAINLLERVGAEVV 153 (182)
Q Consensus 121 ~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v 153 (182)
.|++|||| -.|..-...++.|.++|+.++
T Consensus 30 ~gk~VLVV----GgG~va~~ka~~Ll~~GA~Vt 58 (223)
T 3dfz_A 30 KGRSVLVV----GGGTIATRRIKGFLQEGAAIT 58 (223)
T ss_dssp TTCCEEEE----CCSHHHHHHHHHHGGGCCCEE
T ss_pred CCCEEEEE----CCCHHHHHHHHHHHHCCCEEE
Confidence 89999986 678899999999999998754
No 151
>1nh8_A ATP phosphoribosyltransferase; prtase, de novo His biosynthesis, PRPP, structural genomics, PSI, protei structure initiative; HET: AMP HIS; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.94.1.1 d.58.5.3 PDB: 1nh7_A*
Probab=21.39 E-value=27 Score=27.96 Aligned_cols=19 Identities=21% Similarity=0.380 Sum_probs=13.7
Q ss_pred EeCccCchHHHHHHHHHHHHcCCeEE
Q 030119 128 VDDLIATGGTLCAAINLLERVGAEVV 153 (182)
Q Consensus 128 VDDvitTG~Tl~~~~~~L~~~Ga~~v 153 (182)
|=|++.||+|+++ .|-+++
T Consensus 172 IvDiVsTG~TLra-------NgL~~i 190 (304)
T 1nh8_A 172 IADVVGSGRTLSQ-------HDLVAF 190 (304)
T ss_dssp EEEEESSSHHHHH-------TTEEEE
T ss_pred EEEEeCChHHHHH-------CcCEEc
Confidence 3489999999854 565555
No 152
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=21.32 E-value=1.5e+02 Score=18.15 Aligned_cols=29 Identities=28% Similarity=0.159 Sum_probs=23.3
Q ss_pred cCCCCeEEEEeCccCchHHHHHHHHHHHHcCCe
Q 030119 119 VESAERALVVDDLIATGGTLCAAINLLERVGAE 151 (182)
Q Consensus 119 ~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~ 151 (182)
+.+ +.|+++. .+|..-..++..|++.|-+
T Consensus 51 l~~-~~ivvyC---~~g~rs~~a~~~L~~~G~~ 79 (94)
T 1wv9_A 51 LPR-RPLLLVC---EKGLLSQVAALYLEAEGYE 79 (94)
T ss_dssp CCS-SCEEEEC---SSSHHHHHHHHHHHHHTCC
T ss_pred CCC-CCEEEEc---CCCChHHHHHHHHHHcCCc
Confidence 445 8888886 4688888899999999976
No 153
>1q44_A RARO47, steroid sulfotransferase, AT2G03760/; APO, structu genomics, protein structure initiative, center for eukaryot structural genomics; 1.90A {Arabidopsis thaliana} SCOP: c.37.1.5 PDB: 2q3m_A
Probab=21.30 E-value=2.7e+02 Score=21.73 Aligned_cols=78 Identities=12% Similarity=0.155 Sum_probs=44.5
Q ss_pred CCCCchHHHHHHhhccccCCCCCC-CCceEEecccccCCHHHHHHHHHHHHHHhcCCCCc-EEEEeCCCchhhHHHHHHH
Q 030119 3 AYKDKDARINGIKDQIRVVPNFPK-PGIMFQDITTLLLKPKEFKDTIDMFVERYKGKNIS-VVAGIEARGFIFGPPIALA 80 (182)
Q Consensus 3 ~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~~d~~~l~~~~~~~~~l~~~la~~~~~~~~d-~Iv~v~~~G~~~a~~la~~ 80 (182)
.|-+..+.-+++++.+..+|..+. ....+.....++..+...+..... ...|...+-| .|++-|..|-.+...|...
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~f~~r~~Dv~i~syPKsGTTW~~~iv~~ 87 (326)
T 1q44_A 9 AYLGDEDLTQETRALISSLPKEKGWLVSEIYEFQGLWHTQAILQGILIC-QKRFEAKDSDIILVTNPKSGTTWLKALVFA 87 (326)
T ss_dssp CCCSCHHHHHHHHHHHHHSCEEECSSSSEEEEETTEEECHHHHHHHHHH-HHHCCCCTTCEEEECCTTSCCHHHHHHHHH
T ss_pred ccccccchHHHHHHHHHhCccccCCCCCCeEEECCEEEChHHHHHHHHH-HhcCCcCCCCEEEEeCCCCcHHHHHHHHHH
Confidence 466666777777777777764331 122223334455454444433222 2445544556 4678899998887777665
Q ss_pred h
Q 030119 81 I 81 (182)
Q Consensus 81 l 81 (182)
+
T Consensus 88 i 88 (326)
T 1q44_A 88 L 88 (326)
T ss_dssp H
T ss_pred H
Confidence 4
No 154
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=21.29 E-value=1.6e+02 Score=18.45 Aligned_cols=26 Identities=35% Similarity=0.443 Sum_probs=13.7
Q ss_pred CCeEEEEeCccCchHHHHHHHHHHHHcCC
Q 030119 122 AERALVVDDLIATGGTLCAAINLLERVGA 150 (182)
Q Consensus 122 gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga 150 (182)
.-+|+||||--.....+. ..|...|.
T Consensus 4 ~~~ilivdd~~~~~~~l~---~~l~~~~~ 29 (128)
T 1jbe_A 4 ELKFLVVDDFSTMRRIVR---NLLKELGF 29 (128)
T ss_dssp TCCEEEECSCHHHHHHHH---HHHHHTTC
T ss_pred ccEEEEECCCHHHHHHHH---HHHHHcCC
Confidence 346888888554433333 33444443
No 155
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=21.16 E-value=1.6e+02 Score=18.59 Aligned_cols=34 Identities=15% Similarity=0.212 Sum_probs=30.5
Q ss_pred ccCCCCeEEEEeCccCchHHHHHHHHHHHHcCCe
Q 030119 118 AVESAERALVVDDLIATGGTLCAAINLLERVGAE 151 (182)
Q Consensus 118 ~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~ 151 (182)
.+..|+.|+=|++.-.++.|...+.+.+++.+..
T Consensus 53 gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~ 86 (103)
T 2dc2_A 53 GLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGE 86 (103)
T ss_dssp CCCSSEEEEEETTEESTTSCHHHHHHHHHHCCSE
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCc
Confidence 5678999999999999999999999999998764
No 156
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=21.15 E-value=1.6e+02 Score=19.69 Aligned_cols=38 Identities=16% Similarity=0.212 Sum_probs=31.6
Q ss_pred cCCCCeEEEEeCccCchHHHHHHHHHHHHcC-CeEEEEE
Q 030119 119 VESAERALVVDDLIATGGTLCAAINLLERVG-AEVVECA 156 (182)
Q Consensus 119 ~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~G-a~~v~~~ 156 (182)
+..|+.|+=|++.-.++.|..++.++|++.+ ...+...
T Consensus 84 L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~ 122 (131)
T 1wfg_A 84 LRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELV 122 (131)
T ss_dssp CCTTCEEEEETTEECTTCCHHHHHHHHHHTSSSSEEEEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEE
Confidence 7799999999999999999999999999874 3444433
No 157
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=21.14 E-value=65 Score=24.07 Aligned_cols=39 Identities=15% Similarity=0.250 Sum_probs=26.1
Q ss_pred HHHHHHhcCCCCcEEEEeC-CCchhhHHHHHHHhCCCeee
Q 030119 49 DMFVERYKGKNISVVAGIE-ARGFIFGPPIALAIGAKFVP 87 (182)
Q Consensus 49 ~~la~~~~~~~~d~Iv~v~-~~G~~~a~~la~~l~~p~~~ 87 (182)
..|+..+++.++|+|+... ..|-.++..+|..|+.|.+.
T Consensus 81 ~~l~~~i~~~~p~~Vl~g~t~~G~~laprlAa~L~~~~~s 120 (217)
T 3ih5_A 81 SILVNLFKEEQPQICLMGATVIGRDLGPRVSSALTSGLTA 120 (217)
T ss_dssp HHHHHHHHHHCCSEEEEECSHHHHHHHHHHHHHTTCCCBC
T ss_pred HHHHHHHHhcCCCEEEEeCCcchhhHHHHHHHHhCCCccc
Confidence 3343333333678777654 45567999999999988754
No 158
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=21.03 E-value=2.5e+02 Score=21.52 Aligned_cols=112 Identities=13% Similarity=0.058 Sum_probs=57.5
Q ss_pred cCCHHHHHHHHHHHHHHhcCCCCcEEEEeCCCchh-hHHHHHHHhCCCeeeeecCCC-CCCcccchheeeccc---cce-
Q 030119 38 LLKPKEFKDTIDMFVERYKGKNISVVAGIEARGFI-FGPPIALAIGAKFVPLRKPKK-LPGKVISEEYILEYG---RDC- 111 (182)
Q Consensus 38 ~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~~G~~-~a~~la~~l~~p~~~~~k~~~-~~~~~~~~~~~~~~~---~~~- 111 (182)
-.+|+.....++.|.. +.+++.|+|+...+.. .+..++...++|++....... ..... .-.++.... ...
T Consensus 63 ~~~~~~~~~~~~~l~~---~~~v~~iiG~~~s~~~~~~~~~~~~~~iP~i~~~~~~~~~~~~~-~~~f~~~~~~~~~~~~ 138 (366)
T 3td9_A 63 RSEKTEAANAAARAID---KEKVLAIIGEVASAHSLAIAPIAEENKVPMVTPASTNPLVTQGR-KFVSRVCFIDPFQGAA 138 (366)
T ss_dssp TTCHHHHHHHHHHHHH---TSCCSEEEECSSHHHHHHHHHHHHHTTCCEEESSCCCGGGTTTC-SSEEESSCCHHHHHHH
T ss_pred CCCHHHHHHHHHHHhc---cCCeEEEEccCCchhHHHHHHHHHhCCCeEEecCCCCccccCCC-CCEEEEeCCcHHHHHH
Confidence 4577666555555543 3358999988755533 345566778999987532111 00000 000000000 000
Q ss_pred E-EEeecccCCCCeEEEE---eCccCchHH-HHHHHHHHHHcCCeEEEEE
Q 030119 112 L-EMHVGAVESAERALVV---DDLIATGGT-LCAAINLLERVGAEVVECA 156 (182)
Q Consensus 112 ~-~~~~~~~~~gk~VLlV---DDvitTG~T-l~~~~~~L~~~Ga~~v~~~ 156 (182)
+ ..-...+ ..++|.+| ||- .|.. .....+.+++.|.+++...
T Consensus 139 ~~~~l~~~~-g~~~iaii~~~~~~--~~~~~~~~~~~~~~~~G~~v~~~~ 185 (366)
T 3td9_A 139 MAVFAYKNL-GAKRVVVFTDVEQD--YSVGLSNFFINKFTELGGQVKRVF 185 (366)
T ss_dssp HHHHHHHTS-CCCEEEEEEETTCH--HHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHhc-CCcEEEEEEeCCCc--HHHHHHHHHHHHHHHCCCEEEEEE
Confidence 0 0000122 45888888 333 2333 5667788889998876655
No 159
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=20.84 E-value=96 Score=25.32 Aligned_cols=43 Identities=12% Similarity=0.085 Sum_probs=30.7
Q ss_pred HHHHHHhcCCCCcEEEEeCCCch-hhHHHHHHHhCCCeeeeecC
Q 030119 49 DMFVERYKGKNISVVAGIEARGF-IFGPPIALAIGAKFVPLRKP 91 (182)
Q Consensus 49 ~~la~~~~~~~~d~Iv~v~~~G~-~~a~~la~~l~~p~~~~~k~ 91 (182)
..+.+.+++.+.|+||++-.|.. -.|..+|...++|++.+-..
T Consensus 96 ~~~~~~~~~~~~d~IIavGGGs~~D~AK~iA~~~~~p~i~IPTT 139 (387)
T 3uhj_A 96 ERVRKVAIEHGSDILVGVGGGKTADTAKIVAIDTGARIVIAPTI 139 (387)
T ss_dssp HHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHTTCEEEECCSS
T ss_pred HHHHHHHhhcCCCEEEEeCCcHHHHHHHHHHHhcCCCEEEecCc
Confidence 44444444447899999985543 47888888889999887543
No 160
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=20.67 E-value=1.6e+02 Score=18.27 Aligned_cols=12 Identities=42% Similarity=0.609 Sum_probs=7.4
Q ss_pred CeEEEEeCccCc
Q 030119 123 ERALVVDDLIAT 134 (182)
Q Consensus 123 k~VLlVDDvitT 134 (182)
.+||||||=-..
T Consensus 4 ~~ilivdd~~~~ 15 (124)
T 1srr_A 4 EKILIVDDQSGI 15 (124)
T ss_dssp CEEEEECSCHHH
T ss_pred ceEEEEeCCHHH
Confidence 467777775443
No 161
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=20.66 E-value=70 Score=20.51 Aligned_cols=30 Identities=17% Similarity=0.215 Sum_probs=27.9
Q ss_pred cCCCCeEEEEeCccCchHHHHHHHHHHHHc
Q 030119 119 VESAERALVVDDLIATGGTLCAAINLLERV 148 (182)
Q Consensus 119 ~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~ 148 (182)
+..|++|+=|++.-.++.|..++.++|++.
T Consensus 51 L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 80 (103)
T 1ufx_A 51 LKVGHVILEVNGLTLRGKEHREAARIIAEA 80 (103)
T ss_dssp SCTTCBCCEETTEECTTCBHHHHHHHHHHH
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHHh
Confidence 778999999999999999999999999986
No 162
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=20.58 E-value=80 Score=20.98 Aligned_cols=31 Identities=19% Similarity=0.168 Sum_probs=24.4
Q ss_pred cCCCCeEEEEeCccCchHHHHHHHHHHHHcCCeE
Q 030119 119 VESAERALVVDDLIATGGTLCAAINLLERVGAEV 152 (182)
Q Consensus 119 ~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~ 152 (182)
+.+++.|+++.+ +|.....++..|++.|-+.
T Consensus 79 l~~~~~ivvyC~---~G~rs~~aa~~L~~~G~~~ 109 (129)
T 1tq1_A 79 FGQSDNIIVGCQ---SGGRSIKATTDLLHAGFTG 109 (129)
T ss_dssp CCTTSSEEEEES---SCSHHHHHHHHHHHHHCCS
T ss_pred CCCCCeEEEECC---CCcHHHHHHHHHHHcCCCC
Confidence 446788888865 6888888999999998753
No 163
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=20.49 E-value=84 Score=21.41 Aligned_cols=29 Identities=10% Similarity=0.198 Sum_probs=21.3
Q ss_pred CCCCeEEEEeCccCchHHHHHHHHHHHHcCCe
Q 030119 120 ESAERALVVDDLIATGGTLCAAINLLERVGAE 151 (182)
Q Consensus 120 ~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~ 151 (182)
.+++.|+++.. +|..-..++..|++.|-+
T Consensus 78 ~~~~~ivvyC~---~G~rS~~aa~~L~~~G~~ 106 (148)
T 2fsx_A 78 QHERPVIFLCR---SGNRSIGAAEVATEAGIT 106 (148)
T ss_dssp ---CCEEEECS---SSSTHHHHHHHHHHTTCC
T ss_pred CCCCEEEEEcC---CChhHHHHHHHHHHcCCc
Confidence 46788999874 677777889999999975
No 164
>2hcu_A 3-isopropylmalate dehydratase small subunit; beta barrel, lyase; 2.10A {Streptococcus mutans}
Probab=20.47 E-value=76 Score=23.93 Aligned_cols=35 Identities=20% Similarity=0.214 Sum_probs=30.8
Q ss_pred CCCeEEEEeCccCchHHHHHHHHHHHHcCCeEEEE
Q 030119 121 SAERALVVDDLIATGGTLCAAINLLERVGAEVVEC 155 (182)
Q Consensus 121 ~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~ 155 (182)
++-.||+.-+-.-+|+|=+.|...++..|.+.|-+
T Consensus 84 ~~~~IlvaG~NfGcGSSREhA~~al~~~Gi~aVIA 118 (213)
T 2hcu_A 84 REASILITGDNFGAGSSREHAAWALADYGFKVIVA 118 (213)
T ss_dssp TTCCEEEECSSBTCSSCCHHHHHHHHHHTCCEEEE
T ss_pred cCCcEEEecCCCCCCCCHHHHHHHHHHhCCcEEEE
Confidence 45679999999999999999999999999876533
No 165
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=20.37 E-value=1.1e+02 Score=22.71 Aligned_cols=53 Identities=17% Similarity=0.216 Sum_probs=32.6
Q ss_pred eEEEEeCccCchHHHHHHHHHHHHcCCeEEEEEEEEeecCchhhccc--cCCCeEEe
Q 030119 124 RALVVDDLIATGGTLCAAINLLERVGAEVVECACVIELPDLKGRERL--NGKPLYVL 178 (182)
Q Consensus 124 ~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~vl~~~~~~~~~~~l--~~~~~~sl 178 (182)
||.|+ +..+|+.+.++++.+++.+...--++|+.++....+.+.. .|+|++.+
T Consensus 9 ri~vl--~SG~gsnl~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~gIp~~~~ 63 (209)
T 4ds3_A 9 RVVIF--ISGGGSNMEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAAGIATQVF 63 (209)
T ss_dssp EEEEE--ESSCCHHHHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHTTCCEEEC
T ss_pred cEEEE--EECCcHHHHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHcCCCEEEe
Confidence 44443 4667999999999997654322235566677655444333 27777653
No 166
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=20.33 E-value=1.5e+02 Score=19.43 Aligned_cols=33 Identities=24% Similarity=0.324 Sum_probs=30.2
Q ss_pred cCCCCeEEEEeCccCchHHHHHHHHHHHHcCCe
Q 030119 119 VESAERALVVDDLIATGGTLCAAINLLERVGAE 151 (182)
Q Consensus 119 ~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~ 151 (182)
+..|..|+=|++.-.+|.|...+.+.++..|..
T Consensus 72 L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~ 104 (118)
T 3b76_A 72 IKTGDILLNVDGVELTEVSRSEAVALLKRTSSS 104 (118)
T ss_dssp SCTTCEEEEETTEEGGGSCHHHHHHHHHSCCSE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 779999999999999999999999999988654
No 167
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=20.23 E-value=1.9e+02 Score=22.16 Aligned_cols=39 Identities=21% Similarity=0.025 Sum_probs=25.4
Q ss_pred HHHHHhcCCCCcEEEEeCCCchhhHHHHHHHhCCCeeee
Q 030119 50 MFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKFVPL 88 (182)
Q Consensus 50 ~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~~p~~~~ 88 (182)
.+.+.++..++|+|++-.......+..+++.+++|++..
T Consensus 87 ~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~ 125 (364)
T 1f0k_A 87 QARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLH 125 (364)
T ss_dssp HHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHhcCCCEEEEeCCcCchHHHHHHHHcCCCEEEE
Confidence 344444444799999865433344666777889998764
No 168
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=20.20 E-value=83 Score=24.91 Aligned_cols=37 Identities=14% Similarity=-0.115 Sum_probs=24.0
Q ss_pred HHHHHhcCCCCcEEEEeCCCchhhHHHHHHHhCCCeeee
Q 030119 50 MFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKFVPL 88 (182)
Q Consensus 50 ~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~~p~~~~ 88 (182)
.+...++..++|+|+.- .. ...+..+|+.+++|++..
T Consensus 121 ~l~~~l~~~~pDlVv~d-~~-~~~~~~aA~~~giP~v~~ 157 (398)
T 3oti_A 121 GTMALVDDYRPDLVVYE-QG-ATVGLLAADRAGVPAVQR 157 (398)
T ss_dssp HHHHHHHHHCCSEEEEE-TT-CHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHcCCCEEEEC-ch-hhHHHHHHHHcCCCEEEE
Confidence 34444444479998863 22 234667888999998764
No 169
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=20.20 E-value=1.4e+02 Score=19.16 Aligned_cols=28 Identities=25% Similarity=0.252 Sum_probs=18.3
Q ss_pred CCCeEEEEeCccCchHHHHHHHHHHHHcCCe
Q 030119 121 SAERALVVDDLIATGGTLCAAINLLERVGAE 151 (182)
Q Consensus 121 ~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~ 151 (182)
++.+||||||--..... ..+.|...|..
T Consensus 14 ~~~~ilivdd~~~~~~~---l~~~L~~~g~~ 41 (138)
T 2b4a_A 14 QPFRVTLVEDEPSHATL---IQYHLNQLGAE 41 (138)
T ss_dssp CCCEEEEECSCHHHHHH---HHHHHHHTTCE
T ss_pred CCCeEEEECCCHHHHHH---HHHHHHHcCCE
Confidence 67889999997655444 44445555653
No 170
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=20.04 E-value=1.7e+02 Score=20.75 Aligned_cols=33 Identities=18% Similarity=0.178 Sum_probs=30.0
Q ss_pred cCCCCeEEEEeCccCchHHHHHHHHHHHHcCCe
Q 030119 119 VESAERALVVDDLIATGGTLCAAINLLERVGAE 151 (182)
Q Consensus 119 ~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~ 151 (182)
+..|..|+=|++.-.+|.|...+.++|+..|..
T Consensus 130 L~~GD~Il~VNG~~v~~~~~~~~~~~l~~~g~~ 162 (170)
T 3egg_C 130 IQVNDLLVEVDGTSLVGVTQSFAASVLRNTKGR 162 (170)
T ss_dssp CCTTCEEEEETTEECTTBCHHHHHHHHHHCCSE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCE
Confidence 778999999999999999999999999997753
Done!