BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030126
(182 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SDY5|RCE1_ARATH NEDD8-conjugating enzyme Ubc12 OS=Arabidopsis thaliana GN=RCE1 PE=1
SV=1
Length = 184
Score = 233 bits (593), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 115/170 (67%), Positives = 128/170 (75%), Gaps = 32/170 (18%)
Query: 1 MIRLFKVKEKQKEDAENNT-GGTPVKKQCAGELRLHKDITELNLPEACKISFPNGQDDLM 59
MI LFKVKEKQ+E A+N T GG VKKQ AGELRLHKDI+ELNLP +C ISFPNG+DDLM
Sbjct: 1 MIGLFKVKEKQREQAQNATRGGASVKKQSAGELRLHKDISELNLPSSCSISFPNGKDDLM 60
Query: 60 NFEVSIKPDEGYYQNGTFVFSFEVPPIYPHDAPKVKCKTKVDIFFLNFIHMLLLFNHAIK 119
NFEVSIKPD+GYY NGTFVF+F+V P+YPH+APKVKCKTK
Sbjct: 61 NFEVSIKPDDGYYHNGTFVFTFQVSPVYPHEAPKVKCKTK-------------------- 100
Query: 120 LELYTFESNLQVYHPNIDLEGNVCLNVLREDWKPVLNINTIIYGLYHLFT 169
VYHPNIDLEGNVCLN+LREDWKPVLNINT+IYGL+HLFT
Sbjct: 101 -----------VYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFT 139
>sp|Q9ZU75|UB12L_ARATH Probable NEDD8-conjugating enzyme Ubc12-like OS=Arabidopsis
thaliana GN=RCE2 PE=2 SV=1
Length = 185
Score = 221 bits (563), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 110/171 (64%), Positives = 129/171 (75%), Gaps = 33/171 (19%)
Query: 1 MIRLFKVKEKQKEDAENNTG--GTPVKKQCAGELRLHKDITELNLPEACKISFPNGQDDL 58
MI LFKVKEKQ+E++++N G + VKKQ AGELRLHKDI+ELNLP++CKISFPNG++DL
Sbjct: 1 MIGLFKVKEKQREESQSNNGRGASTVKKQSAGELRLHKDISELNLPKSCKISFPNGKNDL 60
Query: 59 MNFEVSIKPDEGYYQNGTFVFSFEVPPIYPHDAPKVKCKTKVDIFFLNFIHMLLLFNHAI 118
MNFEV+IKPDEGYY +G FVFSF+V +YPH+APKVKCKTK
Sbjct: 61 MNFEVTIKPDEGYYLSGNFVFSFQVSNMYPHEAPKVKCKTK------------------- 101
Query: 119 KLELYTFESNLQVYHPNIDLEGNVCLNVLREDWKPVLNINTIIYGLYHLFT 169
VYHPNIDLEGNVCLN+LREDWKPVLNINT+IYGL+HLFT
Sbjct: 102 ------------VYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFT 140
>sp|Q6DCZ9|UBC12_XENLA NEDD8-conjugating enzyme Ubc12 OS=Xenopus laevis GN=ube2m PE=2 SV=1
Length = 183
Score = 165 bits (417), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 110/170 (64%), Gaps = 36/170 (21%)
Query: 1 MIRLFKVKEKQKEDAENNTGGT--PVKKQCAGELRLHKDITELNLPEACKISFPNGQDDL 58
MI+LF +K+++KE E + GGT KK A +LR+ KDITELNLP+ C+I F + DDL
Sbjct: 1 MIKLFSLKQQKKE--EESAGGTKGSSKKASAAQLRIQKDITELNLPKTCEIEFSD-HDDL 57
Query: 59 MNFEVSIKPDEGYYQNGTFVFSFEVPPIYPHDAPKVKCKTKVDIFFLNFIHMLLLFNHAI 118
+NF++ I PDEG+Y+ G FVFSF+V YPHD PKVKC+T
Sbjct: 58 LNFKLVICPDEGFYKGGKFVFSFKVGQGYPHDPPKVKCET-------------------- 97
Query: 119 KLELYTFESNLQVYHPNIDLEGNVCLNVLREDWKPVLNINTIIYGLYHLF 168
VYHPNIDLEGNVCLN+LREDWKPVL IN+IIYGL +LF
Sbjct: 98 -----------MVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLF 136
>sp|P61082|UBC12_MOUSE NEDD8-conjugating enzyme Ubc12 OS=Mus musculus GN=Ube2m PE=2 SV=1
Length = 183
Score = 164 bits (414), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 110/170 (64%), Gaps = 36/170 (21%)
Query: 1 MIRLFKVKEKQKEDAENNTGGT--PVKKQCAGELRLHKDITELNLPEACKISFPNGQDDL 58
MI+LF +K+++KE E + GGT KK A +LR+ KDI ELNLP+ C ISF + DDL
Sbjct: 1 MIKLFSLKQQKKE--EESAGGTKGSSKKASAAQLRIQKDINELNLPKTCDISFSD-PDDL 57
Query: 59 MNFEVSIKPDEGYYQNGTFVFSFEVPPIYPHDAPKVKCKTKVDIFFLNFIHMLLLFNHAI 118
+NF++ I PDEG+Y++G FVFSF+V YPHD PKVKC+T
Sbjct: 58 LNFKLVICPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCET-------------------- 97
Query: 119 KLELYTFESNLQVYHPNIDLEGNVCLNVLREDWKPVLNINTIIYGLYHLF 168
VYHPNIDLEGNVCLN+LREDWKPVL IN+IIYGL +LF
Sbjct: 98 -----------MVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLF 136
>sp|P61081|UBC12_HUMAN NEDD8-conjugating enzyme Ubc12 OS=Homo sapiens GN=UBE2M PE=1 SV=1
Length = 183
Score = 164 bits (414), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 110/170 (64%), Gaps = 36/170 (21%)
Query: 1 MIRLFKVKEKQKEDAENNTGGT--PVKKQCAGELRLHKDITELNLPEACKISFPNGQDDL 58
MI+LF +K+++KE E + GGT KK A +LR+ KDI ELNLP+ C ISF + DDL
Sbjct: 1 MIKLFSLKQQKKE--EESAGGTKGSSKKASAAQLRIQKDINELNLPKTCDISFSD-PDDL 57
Query: 59 MNFEVSIKPDEGYYQNGTFVFSFEVPPIYPHDAPKVKCKTKVDIFFLNFIHMLLLFNHAI 118
+NF++ I PDEG+Y++G FVFSF+V YPHD PKVKC+T
Sbjct: 58 LNFKLVICPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCET-------------------- 97
Query: 119 KLELYTFESNLQVYHPNIDLEGNVCLNVLREDWKPVLNINTIIYGLYHLF 168
VYHPNIDLEGNVCLN+LREDWKPVL IN+IIYGL +LF
Sbjct: 98 -----------MVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLF 136
>sp|A3KN22|UBC12_BOVIN NEDD8-conjugating enzyme Ubc12 OS=Bos taurus GN=UBE2M PE=2 SV=1
Length = 183
Score = 164 bits (414), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 110/170 (64%), Gaps = 36/170 (21%)
Query: 1 MIRLFKVKEKQKEDAENNTGGT--PVKKQCAGELRLHKDITELNLPEACKISFPNGQDDL 58
MI+LF +K+++KE E + GGT KK A +LR+ KDI ELNLP+ C ISF + DDL
Sbjct: 1 MIKLFSLKQQKKE--EESAGGTKGSSKKASAAQLRIQKDINELNLPKTCDISFSD-PDDL 57
Query: 59 MNFEVSIKPDEGYYQNGTFVFSFEVPPIYPHDAPKVKCKTKVDIFFLNFIHMLLLFNHAI 118
+NF++ I PDEG+Y++G FVFSF+V YPHD PKVKC+T
Sbjct: 58 LNFKLVICPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCET-------------------- 97
Query: 119 KLELYTFESNLQVYHPNIDLEGNVCLNVLREDWKPVLNINTIIYGLYHLF 168
VYHPNIDLEGNVCLN+LREDWKPVL IN+IIYGL +LF
Sbjct: 98 -----------MVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLF 136
>sp|Q6P8D9|UBC12_XENTR NEDD8-conjugating enzyme Ubc12 OS=Xenopus tropicalis GN=ube2m PE=2
SV=1
Length = 183
Score = 162 bits (411), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 109/170 (64%), Gaps = 36/170 (21%)
Query: 1 MIRLFKVKEKQKEDAENNTGGT--PVKKQCAGELRLHKDITELNLPEACKISFPNGQDDL 58
MI+LF +K+++KE E + GGT KK A +LR+ KDI ELNLP+ C+I F + DDL
Sbjct: 1 MIKLFSLKQQKKE--EESAGGTKGSSKKASAAQLRIQKDINELNLPKTCEIEFSD-HDDL 57
Query: 59 MNFEVSIKPDEGYYQNGTFVFSFEVPPIYPHDAPKVKCKTKVDIFFLNFIHMLLLFNHAI 118
+NF++ I PDEG+Y+ G FVFSF+V YPHD PKVKC+T
Sbjct: 58 LNFKLVICPDEGFYKGGKFVFSFKVGQGYPHDPPKVKCET-------------------- 97
Query: 119 KLELYTFESNLQVYHPNIDLEGNVCLNVLREDWKPVLNINTIIYGLYHLF 168
VYHPNIDLEGNVCLN+LREDWKPVL IN+IIYGL +LF
Sbjct: 98 -----------MVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLF 136
>sp|Q9VSF3|UBC12_DROME NEDD8-conjugating enzyme Ubc12 OS=Drosophila melanogaster GN=CG7375
PE=2 SV=1
Length = 181
Score = 154 bits (390), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/168 (49%), Positives = 104/168 (61%), Gaps = 35/168 (20%)
Query: 1 MIRLFKVKEKQKEDAENNTGGTPVKKQCAGELRLHKDITELNLPEACKISFPNGQDDLMN 60
MI+LF +K+ QK+D E G+ KK A +LR+ KDI ELNLP C FP+ +DL+N
Sbjct: 1 MIKLFTLKQ-QKKDGEQK--GSQQKKASAAQLRIQKDINELNLPNTCATDFPD-PNDLLN 56
Query: 61 FEVSIKPDEGYYQNGTFVFSFEVPPIYPHDAPKVKCKTKVDIFFLNFIHMLLLFNHAIKL 120
F++ I PDEG+Y++G FVF+F V YPH+ PKVKC T
Sbjct: 57 FKLIISPDEGFYRDGRFVFNFRVGSNYPHEPPKVKCAT---------------------- 94
Query: 121 ELYTFESNLQVYHPNIDLEGNVCLNVLREDWKPVLNINTIIYGLYHLF 168
QVYHPNIDL+GNVCLN+LREDW PVLNIN+I+YGL LF
Sbjct: 95 ---------QVYHPNIDLDGNVCLNILREDWNPVLNINSIVYGLQFLF 133
>sp|Q6C9W0|UBC12_YARLI NEDD8-conjugating enzyme UBC12 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=UBC12 PE=3 SV=1
Length = 179
Score = 150 bits (380), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/168 (45%), Positives = 104/168 (61%), Gaps = 37/168 (22%)
Query: 1 MIRLFKVKEKQKEDAENNTGGTPVKKQCAGELRLHKDITELNLPEACKISFPNGQDDLMN 60
M++++ +KEKQ + GG+ KK A +LR+ KD++EL+LP K FP+ +D +MN
Sbjct: 1 MLKIWSMKEKQAAE-----GGSAKKKVTAAQLRVQKDLSELSLPSTMKTHFPSAED-IMN 54
Query: 61 FEVSIKPDEGYYQNGTFVFSFEVPPIYPHDAPKVKCKTKVDIFFLNFIHMLLLFNHAIKL 120
FE++++PDEG+YQ G F FSF V P +PH+ PKVKC K
Sbjct: 55 FELTVRPDEGFYQGGEFRFSFYVNPNFPHEPPKVKCLQK--------------------- 93
Query: 121 ELYTFESNLQVYHPNIDLEGNVCLNVLREDWKPVLNINTIIYGLYHLF 168
VYHPNIDLEGNVCLN+LREDWKPVL++N ++ GL +LF
Sbjct: 94 ----------VYHPNIDLEGNVCLNILREDWKPVLSLNAVMIGLQYLF 131
>sp|Q54TI6|UBC12_DICDI NEDD8-conjugating enzyme Ubc12 OS=Dictyostelium discoideum GN=ube2m
PE=3 SV=1
Length = 230
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 89/164 (54%), Gaps = 39/164 (23%)
Query: 5 FKVKEKQKEDAENNTGGTPVKKQCAGELRLHKDITELNLPEACKISFPNGQDDLMNFEVS 64
F +K KQ ++ + K+ ELR KDI E+ +P C +SF + +D++NF +S
Sbjct: 60 FSLKTKQSSESGS-------KRANPAELRAQKDIDEMEVPTGCAVSFKD-TNDILNFNLS 111
Query: 65 IKPDEGYYQNGTFVFSFEVPPIYPHDAPKVKCKTKVDIFFLNFIHMLLLFNHAIKLELYT 124
I P +G YQ+ TF F+ +P YP+D PKV C T
Sbjct: 112 ITPTDGLYQSATFQFTINIPSTYPYDPPKVHCDT-------------------------- 145
Query: 125 FESNLQVYHPNIDLEGNVCLNVLREDWKPVLNINTIIYGLYHLF 168
VYHPNIDLEG+VCLN+LR+DW PVLNI T+I+GL LF
Sbjct: 146 -----LVYHPNIDLEGHVCLNILRQDWMPVLNIGTVIFGLMTLF 184
>sp|O74549|UBC12_SCHPO NEDD8-conjugating enzyme ubc12 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=ubc12 PE=3 SV=1
Length = 177
Score = 119 bits (299), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 93/168 (55%), Gaps = 38/168 (22%)
Query: 1 MIRLFKVKEKQKEDAENNTGGTPVKKQCAGELRLHKDITELNLPEACKISFPNGQDDLMN 60
M +++++K+K+ + +N +G +P ++R+ KD+T+L +P S+P+ L
Sbjct: 1 MRKIWELKKKEAQKEKNASGISPA------QIRIQKDVTDLEIPSTMSTSWPD-PIKLNV 53
Query: 61 FEVSIKPDEGYYQNGTFVFSFEVPPIYPHDAPKVKCKTKVDIFFLNFIHMLLLFNHAIKL 120
+ I+PDEGYY+ G F F ++ YPHD PKVKC K
Sbjct: 54 LHLEIRPDEGYYKGGKFKFRIQIDDNYPHDPPKVKCLNK--------------------- 92
Query: 121 ELYTFESNLQVYHPNIDLEGNVCLNVLREDWKPVLNINTIIYGLYHLF 168
+YHPNID+EGNVCLN+LR+DW PVLN+N+I+ GL LF
Sbjct: 93 ----------IYHPNIDIEGNVCLNILRQDWNPVLNLNSILVGLQFLF 130
>sp|P52491|UBC12_YEAST NEDD8-conjugating enzyme UBC12 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=UBC12 PE=1 SV=1
Length = 188
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 38/173 (21%)
Query: 1 MIRLFKVKEKQKEDAENNTGGTPVKKQCAGELRLHKDITELNLPEACK---ISFPNGQDD 57
M++L ++++K++++ EN++ P A +RL +D+ L+LP I+ P+ D
Sbjct: 1 MLKLRQLQKKKQKENENSSSIQP--NLSAARIRLKRDLDSLDLPPTVTLNVITSPDSADR 58
Query: 58 LMN--FEVSIKPDEGYYQNGTFVFSFEVPPIYPHDAPKVKCKTKVDIFFLNFIHMLLLFN 115
+ EV ++PDEGYY G+ F+ + +YP + PKV C K+
Sbjct: 59 SQSPKLEVIVRPDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKKI--------------- 103
Query: 116 HAIKLELYTFESNLQVYHPNIDLEGNVCLNVLREDWKPVLNINTIIYGLYHLF 168
+HPNIDL+GNVCLN+LREDW P L++ +II GL LF
Sbjct: 104 ----------------FHPNIDLKGNVCLNILREDWSPALDLQSIITGLLFLF 140
>sp|Q6NY82|UBE2F_DANRE NEDD8-conjugating enzyme UBE2F OS=Danio rerio GN=ube2f PE=2 SV=1
Length = 185
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 84/184 (45%), Gaps = 46/184 (25%)
Query: 4 LFKVKEKQKEDAENNTGGTPVKKQCAG------ELRLHKDITEL--NLPEACKISFPNGQ 55
+ + K K + G TP A + L K++ EL NLP CK++FP+ +
Sbjct: 1 MLTLASKLKREEGVRAGRTPAGSNDAAHRVSIRDRLLIKEVAELEANLPSTCKVTFPD-E 59
Query: 56 DDLMNFEVSIKPDEGYYQNGTFVFSFEVPPIYPHDAPKVKCKTKVDIFFLNFIHMLLLFN 115
+ L +F+++I PDEGYY G F F EVP Y PKVKC T+
Sbjct: 60 NKLCHFQLAISPDEGYYLGGKFQFEIEVPEAYNMVPPKVKCLTR---------------- 103
Query: 116 HAIKLELYTFESNLQVYHPNIDLEGNVCLNVLRE------DWKPVLNINTIIYGLYHLFT 169
++HPNI G +CL++LRE W P + +++GL LFT
Sbjct: 104 ---------------IWHPNIAETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFT 148
Query: 170 VMLD 173
+L+
Sbjct: 149 DLLN 152
>sp|Q6FVQ8|UBC12_CANGA NEDD8-conjugating enzyme UBC12 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=UBC12 PE=3 SV=1
Length = 187
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 68/142 (47%), Gaps = 36/142 (25%)
Query: 30 GELRLHKDITELNLPEACK---ISFPNGQDDLMNFEVSIKPDEGYYQNGTFVFSFEVPPI 86
+LRL KDI EL LP + IS N ++ M+ + I PDEG+Y+ G F F+
Sbjct: 33 AKLRLQKDIEELELPPTVRVNIISLDNHKE--MSLNIIIIPDEGFYKGGKFRFTATFLET 90
Query: 87 YPHDAPKVKCKTKVDIFFLNFIHMLLLFNHAIKLELYTFESNLQVYHPNIDLEGNVCLNV 146
YP D PKV C K ++HPNID G +CLN+
Sbjct: 91 YPIDPPKVICNNK-------------------------------IFHPNIDPHGKICLNI 119
Query: 147 LREDWKPVLNINTIIYGLYHLF 168
LREDW P L++ I+ GL LF
Sbjct: 120 LREDWSPALDLQCIVLGLLSLF 141
>sp|Q3UWQ3|UB2FB_MOUSE NEDD8-conjugating enzyme UBE2F-B OS=Mus musculus GN=Ube2fb PE=2
SV=1
Length = 185
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 67/140 (47%), Gaps = 38/140 (27%)
Query: 40 ELNLPEACKISFPNGQDDLMNFEVSIKPDEGYYQNGTFVFSFEVPPIYPHDAPKVKCKTK 99
E NLP CK+ FP+ + L F++++ PDEGYYQ G F F EVP Y PKVKC TK
Sbjct: 45 EANLPWTCKVHFPD-PNKLHCFQLTVSPDEGYYQGGNFQFEIEVPDAYNMVPPKVKCLTK 103
Query: 100 VDIFFLNFIHMLLLFNHAIKLELYTFESNLQVYHPNIDLEGNVCLNVLRE------DWKP 153
++HPNI G +CL++LRE W P
Sbjct: 104 -------------------------------IWHPNITETGEICLSLLREHSADGTGWAP 132
Query: 154 VLNINTIIYGLYHLFTVMLD 173
+ +++GL LFT +L+
Sbjct: 133 TRTLKDVVWGLNSLFTDLLN 152
>sp|Q9CY34|UB2FA_MOUSE NEDD8-conjugating enzyme UBE2F OS=Mus musculus GN=Ube2f PE=1 SV=1
Length = 185
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 72/148 (48%), Gaps = 40/148 (27%)
Query: 34 LHKDITEL--NLPEACKISFPNGQDDLMNFEVSIKPDEGYYQNGTFVFSFEVPPIYPHDA 91
L K++ EL NLP CK+ FP+ + L F++++ PDEGYYQ G F F EVP Y
Sbjct: 37 LVKEVAELEANLPCTCKVHFPD-PNKLHCFQLTVSPDEGYYQGGKFQFETEVPDAYNMVP 95
Query: 92 PKVKCKTKVDIFFLNFIHMLLLFNHAIKLELYTFESNLQVYHPNIDLEGNVCLNVLRE-- 149
PKVKC TK ++HPNI G +CL++LRE
Sbjct: 96 PKVKCLTK-------------------------------IWHPNITETGEICLSLLREHS 124
Query: 150 ----DWKPVLNINTIIYGLYHLFTVMLD 173
W P + +++GL LFT +L+
Sbjct: 125 IDGTGWAPTRTLKDVVWGLNSLFTDLLN 152
>sp|Q5U203|UBE2F_RAT NEDD8-conjugating enzyme UBE2F OS=Rattus norvegicus GN=Ube2f PE=2
SV=2
Length = 185
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 72/148 (48%), Gaps = 40/148 (27%)
Query: 34 LHKDITEL--NLPEACKISFPNGQDDLMNFEVSIKPDEGYYQNGTFVFSFEVPPIYPHDA 91
L K++ EL NLP CK+ FP+ + L F++++ PDEGYYQ G F F EVP Y
Sbjct: 37 LVKEVAELEANLPCTCKVHFPD-PNKLHCFQLTVSPDEGYYQGGKFQFETEVPDAYNMVP 95
Query: 92 PKVKCKTKVDIFFLNFIHMLLLFNHAIKLELYTFESNLQVYHPNIDLEGNVCLNVLRE-- 149
PKVKC TK ++HPNI G +CL++LRE
Sbjct: 96 PKVKCLTK-------------------------------IWHPNITETGEICLSLLREHS 124
Query: 150 ----DWKPVLNINTIIYGLYHLFTVMLD 173
W P + +++GL LFT +L+
Sbjct: 125 IDGTGWAPTRTLKDVVWGLNSLFTDLLN 152
>sp|Q1RMW1|UBE2F_BOVIN NEDD8-conjugating enzyme UBE2F OS=Bos taurus GN=UBE2F PE=2 SV=1
Length = 185
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 40/177 (22%)
Query: 5 FKVKEKQKEDAENNTGGTPVKKQCAGELRLHKDITEL--NLPEACKISFPNGQDDLMNFE 62
K + K + T ++ + L K++ EL NLP CK+ FP+ + L F+
Sbjct: 8 LKRDDGLKGSRASATASDSTRRVSVRDRLLVKEVAELEANLPCTCKVHFPD-PNKLHCFQ 66
Query: 63 VSIKPDEGYYQNGTFVFSFEVPPIYPHDAPKVKCKTKVDIFFLNFIHMLLLFNHAIKLEL 122
+++ PDEGYYQ G F F EVP Y PKVKC T+
Sbjct: 67 LTVTPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTR----------------------- 103
Query: 123 YTFESNLQVYHPNIDLEGNVCLNVLRE------DWKPVLNINTIIYGLYHLFTVMLD 173
++HPNI G +CL++LRE W P + +++GL LFT +L+
Sbjct: 104 --------IWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLN 152
>sp|Q969M7|UBE2F_HUMAN NEDD8-conjugating enzyme UBE2F OS=Homo sapiens GN=UBE2F PE=1 SV=1
Length = 185
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 76/163 (46%), Gaps = 40/163 (24%)
Query: 19 TGGTPVKKQCAGELRLHKDITEL--NLPEACKISFPNGQDDLMNFEVSIKPDEGYYQNGT 76
T ++ + L K++ EL NLP CK+ FP+ + L F++++ PDEGYYQ G
Sbjct: 22 TASDSTRRVSVRDKLLVKEVAELEANLPCTCKVHFPD-PNKLHCFQLTVTPDEGYYQGGK 80
Query: 77 FVFSFEVPPIYPHDAPKVKCKTKVDIFFLNFIHMLLLFNHAIKLELYTFESNLQVYHPNI 136
F F EVP Y PKVKC TK ++HPNI
Sbjct: 81 FQFETEVPDAYNMVPPKVKCLTK-------------------------------IWHPNI 109
Query: 137 DLEGNVCLNVLRE------DWKPVLNINTIIYGLYHLFTVMLD 173
G +CL++LRE W P + +++GL LFT +L+
Sbjct: 110 TETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLN 152
>sp|Q6CSW8|UBC12_KLULA NEDD8-conjugating enzyme UBC12 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=UBC12 PE=3 SV=1
Length = 184
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 68/137 (49%), Gaps = 31/137 (22%)
Query: 32 LRLHKDITELNLPEACKISFPNGQDDLMNFEVSIKPDEGYYQNGTFVFSFEVPPIYPHDA 91
+RL KD+ ++L E ++ M ++IKPD GYY GT+ F+ + YP +
Sbjct: 32 IRLKKDLENIDLSEQICEYTTYLDENPMRVNLAIKPDIGYYAGGTYYFNVFIKDTYPMEP 91
Query: 92 PKVKCKTKVDIFFLNFIHMLLLFNHAIKLELYTFESNLQVYHPNIDLEGNVCLNVLREDW 151
P VKC ++ YHPNID++GNVCLN+LREDW
Sbjct: 92 PVVKCMHRI-------------------------------YHPNIDIDGNVCLNLLREDW 120
Query: 152 KPVLNINTIIYGLYHLF 168
P L+I +II G+ LF
Sbjct: 121 TPALDIQSIIIGILFLF 137
>sp|Q5ZKX6|UBE2F_CHICK NEDD8-conjugating enzyme UBE2F OS=Gallus gallus GN=UBE2F PE=2 SV=1
Length = 185
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 78/165 (47%), Gaps = 40/165 (24%)
Query: 17 NNTGGTPVKKQCAGELRLHKDITEL--NLPEACKISFPNGQDDLMNFEVSIKPDEGYYQN 74
+N ++ + L K++ EL NLP CK++FP+ + L F++++ PDEGYYQ
Sbjct: 20 SNPASDSTRRVSVRDKLLVKEVAELEANLPCTCKVNFPD-PNKLHYFQLTVIPDEGYYQG 78
Query: 75 GTFVFSFEVPPIYPHDAPKVKCKTKVDIFFLNFIHMLLLFNHAIKLELYTFESNLQVYHP 134
G F F EVP Y PKVKC T+ ++HP
Sbjct: 79 GKFQFEIEVPDAYNMVPPKVKCLTR-------------------------------IWHP 107
Query: 135 NIDLEGNVCLNVLRE------DWKPVLNINTIIYGLYHLFTVMLD 173
NI G +CL++LRE W P + +++GL LFT +L+
Sbjct: 108 NITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLN 152
>sp|Q6IRC7|UBE2F_XENLA NEDD8-conjugating enzyme UBE2F OS=Xenopus laevis GN=ube2f PE=2 SV=1
Length = 185
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 71/148 (47%), Gaps = 40/148 (27%)
Query: 34 LHKDITEL--NLPEACKISFPNGQDDLMNFEVSIKPDEGYYQNGTFVFSFEVPPIYPHDA 91
L K++ EL NLP CK++FP+ + L F +++ PDE YYQ G F F EVP Y
Sbjct: 37 LVKEVAELEANLPCTCKVNFPD-PNKLHYFHLTVSPDESYYQGGRFQFEIEVPDAYNMVP 95
Query: 92 PKVKCKTKVDIFFLNFIHMLLLFNHAIKLELYTFESNLQVYHPNIDLEGNVCLNVLRE-- 149
PKVKC T+ ++HPNI G +CL++LRE
Sbjct: 96 PKVKCLTR-------------------------------IWHPNITETGEICLSLLREHS 124
Query: 150 ----DWKPVLNINTIIYGLYHLFTVMLD 173
W P + +++GL LFT +L+
Sbjct: 125 IDGTGWAPTRTLKDVVWGLNSLFTDLLN 152
>sp|Q5M8Y2|UBE2F_XENTR NEDD8-conjugating enzyme UBE2F OS=Xenopus tropicalis GN=ube2f PE=2
SV=1
Length = 185
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 71/148 (47%), Gaps = 40/148 (27%)
Query: 34 LHKDITEL--NLPEACKISFPNGQDDLMNFEVSIKPDEGYYQNGTFVFSFEVPPIYPHDA 91
L K++ EL NLP CK++FP+ + L F +++ PDE YYQ G F F EVP Y
Sbjct: 37 LVKEVAELEANLPCTCKVNFPD-PNKLHYFHLTVSPDESYYQGGRFQFEIEVPDAYNMVP 95
Query: 92 PKVKCKTKVDIFFLNFIHMLLLFNHAIKLELYTFESNLQVYHPNIDLEGNVCLNVLRE-- 149
PKVKC T+ ++HPNI G +CL++LRE
Sbjct: 96 PKVKCLTR-------------------------------IWHPNITETGEICLSLLREHS 124
Query: 150 ----DWKPVLNINTIIYGLYHLFTVMLD 173
W P + +++GL LFT +L+
Sbjct: 125 IDGTGWAPTRTLKDVVWGLNSLFTDLLN 152
>sp|Q75AF2|UBC12_ASHGO NEDD8-conjugating enzyme UBC12 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=UBC12
PE=3 SV=2
Length = 184
Score = 73.2 bits (178), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 61/131 (46%), Gaps = 34/131 (25%)
Query: 30 GELRLHKDITELNLPEACKISFPN-GQDDLMNFEVSIKPDEGYYQNGTFVFSFEVPPIYP 88
+LR+ KD+ L LP + G ++ + +S P+EG Y+ G F FS YP
Sbjct: 31 AQLRVEKDLATLELPTTVTLDTKCLGSENKVYLRIS--PEEGVYRGGHFRFSVVFRDTYP 88
Query: 89 HDAPKVKCKTKVDIFFLNFIHMLLLFNHAIKLELYTFESNLQVYHPNIDLEGNVCLNVLR 148
+ P VKC LN I YHPNID GN+CLNVLR
Sbjct: 89 IEPPTVKC--------LNTI-----------------------YHPNIDYSGNICLNVLR 117
Query: 149 EDWKPVLNINT 159
EDW PV+++ T
Sbjct: 118 EDWSPVMDLQT 128
>sp|Q9XVK5|UBC12_CAEEL NEDD8-conjugating enzyme ubc-12 OS=Caenorhabditis elegans GN=ubc-12
PE=2 SV=1
Length = 180
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 37/122 (30%)
Query: 58 LMNFEVSIKPDEGYYQNGTFVFSFEVPPIYPHDAPKVKCKTKVDIFFLNFIHMLLLFNHA 117
L E+++ P EG Y+ G F F VPP Y + P VKC TKV
Sbjct: 58 LHELELTVTPQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKV----------------- 100
Query: 118 IKLELYTFESNLQVYHPNIDLEGNVCLNVLRED------WKPVLNINTIIYGLYHLFTVM 171
+HPNI+ +G++CL++LR++ W+P N+ +++GL LF +
Sbjct: 101 --------------WHPNINEDGSICLSILRQNSLDQYGWRPTRNLTDVVHGLVSLFNDL 146
Query: 172 LD 173
+D
Sbjct: 147 MD 148
>sp|P35134|UBC11_ARATH Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11
PE=2 SV=2
Length = 148
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 32/138 (23%)
Query: 33 RLHKDITELNLPEACKISFPNGQDDLMNFEVSI-KPDEGYYQNGTFVFSFEVPPIYPHDA 91
R+ K++ +L S +D+ +++ +I P E Y G F+ S PP YP
Sbjct: 5 RILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKP 64
Query: 92 PKVKCKTKVDIFFLNFIHMLLLFNHAIKLELYTFESNLQVYHPNIDLEGNVCLNVLREDW 151
PKV KTKV YHPNI+ G++CL++L+E W
Sbjct: 65 PKVSFKTKV-------------------------------YHPNINSNGSICLDILKEQW 93
Query: 152 KPVLNINTIIYGLYHLFT 169
P L I+ ++ + L T
Sbjct: 94 SPALTISKVLLSICSLLT 111
>sp|Q9FKT3|UBC30_ARATH Ubiquitin-conjugating enzyme E2 30 OS=Arabidopsis thaliana GN=UBC30
PE=2 SV=1
Length = 148
Score = 63.2 bits (152), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 36/140 (25%)
Query: 33 RLHKDITEL--NLPEACKISFPNGQDDLMNFEVSI-KPDEGYYQNGTFVFSFEVPPIYPH 89
R++K++ +L + P +C P G DD+ ++ +I P + + G F+ + PP YP
Sbjct: 5 RINKELRDLQRDPPVSCSAG-PTG-DDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPF 62
Query: 90 DAPKVKCKTKVDIFFLNFIHMLLLFNHAIKLELYTFESNLQVYHPNIDLEGNVCLNVLRE 149
PKV +TKV YHPNI+ G++CL++L+E
Sbjct: 63 KPPKVAFRTKV-------------------------------YHPNINSNGSICLDILKE 91
Query: 150 DWKPVLNINTIIYGLYHLFT 169
W P L ++ ++ + L T
Sbjct: 92 QWSPALTVSKVLLSICSLLT 111
>sp|Q9SLE4|UBC29_ARATH Ubiquitin-conjugating enzyme E2 29 OS=Arabidopsis thaliana GN=UBC29
PE=2 SV=1
Length = 148
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 36/140 (25%)
Query: 33 RLHKDITEL--NLPEACKISFPNGQDDLMNFEVSI-KPDEGYYQNGTFVFSFEVPPIYPH 89
R+ K++ EL + P +C P G+D + +++ +I P+E Y G F+ + PP YP
Sbjct: 5 RILKELKELQRDPPVSCSAG-PTGED-MFHWQATIMGPNESPYSGGVFLVNIHFPPDYPF 62
Query: 90 DAPKVKCKTKVDIFFLNFIHMLLLFNHAIKLELYTFESNLQVYHPNIDLEGNVCLNVLRE 149
PKV +TKV +HPNI+ GN+CL++L++
Sbjct: 63 KPPKVVFRTKV-------------------------------FHPNINSNGNICLDILKD 91
Query: 150 DWKPVLNINTIIYGLYHLFT 169
W P L I+ ++ + L T
Sbjct: 92 QWSPALTISKVLLSICSLLT 111
>sp|P43102|UBC4_CANAX Ubiquitin-conjugating enzyme E2 4 OS=Candida albicans GN=UBC4 PE=2
SV=1
Length = 147
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 36/140 (25%)
Query: 33 RLHKDITEL--NLPEACKISFPNGQDDLMNFEVSI-KPDEGYYQNGTFVFSFEVPPIYPH 89
R++K++++L + P +C + P G DDL +++ SI P + Y G F S P YP
Sbjct: 5 RINKELSDLGRDPPSSCS-AGPVG-DDLYHWQASIMGPPDSPYAGGVFFLSIHFPTDYPL 62
Query: 90 DAPKVKCKTKVDIFFLNFIHMLLLFNHAIKLELYTFESNLQVYHPNIDLEGNVCLNVLRE 149
PK+ TK+ YHPNI+ GN+CL++L++
Sbjct: 63 KPPKIALTTKI-------------------------------YHPNINSNGNICLDILKD 91
Query: 150 DWKPVLNINTIIYGLYHLFT 169
W P L I+ ++ + L T
Sbjct: 92 QWSPALTISKVLLSICSLLT 111
>sp|P15732|UBC5_YEAST Ubiquitin-conjugating enzyme E2-16 kDa OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBC5 PE=1 SV=1
Length = 148
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 62/139 (44%), Gaps = 34/139 (24%)
Query: 33 RLHKDITELNL-PEACKISFPNGQDDLMNFEVSI-KPDEGYYQNGTFVFSFEVPPIYPHD 90
R+ K++++L P A + P G DDL +++ SI P + Y G F S P YP
Sbjct: 6 RIAKELSDLGRDPPASCSAGPVG-DDLYHWQASIMGPSDSPYAGGVFFLSIHFPTDYPFK 64
Query: 91 APKVKCKTKVDIFFLNFIHMLLLFNHAIKLELYTFESNLQVYHPNIDLEGNVCLNVLRED 150
PKV TK+ YHPNI+ GN+CL++L++
Sbjct: 65 PPKVNFTTKI-------------------------------YHPNINSSGNICLDILKDQ 93
Query: 151 WKPVLNINTIIYGLYHLFT 169
W P L ++ ++ + L T
Sbjct: 94 WSPALTLSKVLLSICSLLT 112
>sp|Q9Y2X8|UB2D4_HUMAN Ubiquitin-conjugating enzyme E2 D4 OS=Homo sapiens GN=UBE2D4 PE=1
SV=1
Length = 147
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 32/137 (23%)
Query: 33 RLHKDITELNLPEACKISFPNGQDDLMNFEVSI-KPDEGYYQNGTFVFSFEVPPIYPHDA 91
R+ K++T+L + S DDL +++ +I P++ YQ G F + P YP
Sbjct: 5 RIQKELTDLQRDPPAQCSAGPVGDDLFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKP 64
Query: 92 PKVKCKTKVDIFFLNFIHMLLLFNHAIKLELYTFESNLQVYHPNIDLEGNVCLNVLREDW 151
PKV TK+ YHPNI+ G++CL++LR W
Sbjct: 65 PKVAFTTKI-------------------------------YHPNINSNGSICLDILRSQW 93
Query: 152 KPVLNINTIIYGLYHLF 168
P L ++ ++ + L
Sbjct: 94 SPALTVSKVLLSICSLL 110
>sp|P52490|UBC13_YEAST Ubiquitin-conjugating enzyme E2 13 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBC13 PE=1 SV=1
Length = 153
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 32/115 (27%)
Query: 56 DDLMNFEVSIK-PDEGYYQNGTFVFSFEVPPIYPHDAPKVKCKTKVDIFFLNFIHMLLLF 114
D+L F+V+I+ P++ Y++G F +P YP +APKV+ TK+
Sbjct: 30 DNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKI-------------- 75
Query: 115 NHAIKLELYTFESNLQVYHPNIDLEGNVCLNVLREDWKPVLNINTIIYGLYHLFT 169
YHPNID G +CL+VL+ +W P L I T++ + L
Sbjct: 76 -----------------YHPNIDRLGRICLDVLKTNWSPALQIRTVLLSIQALLA 113
>sp|P62840|UB2D2_XENLA Ubiquitin-conjugating enzyme E2 D2 OS=Xenopus laevis GN=ube2d2 PE=1
SV=1
Length = 147
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 32/137 (23%)
Query: 33 RLHKDITELNLPEACKISFPNGQDDLMNFEVSI-KPDEGYYQNGTFVFSFEVPPIYPHDA 91
R+HK++ +L + S DD+ +++ +I P++ YQ G F + P YP
Sbjct: 5 RIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKP 64
Query: 92 PKVKCKTKVDIFFLNFIHMLLLFNHAIKLELYTFESNLQVYHPNIDLEGNVCLNVLREDW 151
PKV T++ YHPNI+ G++CL++LR W
Sbjct: 65 PKVAFTTRI-------------------------------YHPNINSNGSICLDILRSQW 93
Query: 152 KPVLNINTIIYGLYHLF 168
P L I+ ++ + L
Sbjct: 94 SPALTISKVLLSICSLL 110
>sp|P62839|UB2D2_RAT Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norvegicus GN=Ube2d2
PE=1 SV=1
Length = 147
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 32/137 (23%)
Query: 33 RLHKDITELNLPEACKISFPNGQDDLMNFEVSI-KPDEGYYQNGTFVFSFEVPPIYPHDA 91
R+HK++ +L + S DD+ +++ +I P++ YQ G F + P YP
Sbjct: 5 RIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKP 64
Query: 92 PKVKCKTKVDIFFLNFIHMLLLFNHAIKLELYTFESNLQVYHPNIDLEGNVCLNVLREDW 151
PKV T++ YHPNI+ G++CL++LR W
Sbjct: 65 PKVAFTTRI-------------------------------YHPNINSNGSICLDILRSQW 93
Query: 152 KPVLNINTIIYGLYHLF 168
P L I+ ++ + L
Sbjct: 94 SPALTISKVLLSICSLL 110
>sp|P62838|UB2D2_MOUSE Ubiquitin-conjugating enzyme E2 D2 OS=Mus musculus GN=Ube2d2 PE=1
SV=1
Length = 147
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 32/137 (23%)
Query: 33 RLHKDITELNLPEACKISFPNGQDDLMNFEVSI-KPDEGYYQNGTFVFSFEVPPIYPHDA 91
R+HK++ +L + S DD+ +++ +I P++ YQ G F + P YP
Sbjct: 5 RIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKP 64
Query: 92 PKVKCKTKVDIFFLNFIHMLLLFNHAIKLELYTFESNLQVYHPNIDLEGNVCLNVLREDW 151
PKV T++ YHPNI+ G++CL++LR W
Sbjct: 65 PKVAFTTRI-------------------------------YHPNINSNGSICLDILRSQW 93
Query: 152 KPVLNINTIIYGLYHLF 168
P L I+ ++ + L
Sbjct: 94 SPALTISKVLLSICSLL 110
>sp|P62837|UB2D2_HUMAN Ubiquitin-conjugating enzyme E2 D2 OS=Homo sapiens GN=UBE2D2 PE=1
SV=1
Length = 147
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 32/137 (23%)
Query: 33 RLHKDITELNLPEACKISFPNGQDDLMNFEVSI-KPDEGYYQNGTFVFSFEVPPIYPHDA 91
R+HK++ +L + S DD+ +++ +I P++ YQ G F + P YP
Sbjct: 5 RIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKP 64
Query: 92 PKVKCKTKVDIFFLNFIHMLLLFNHAIKLELYTFESNLQVYHPNIDLEGNVCLNVLREDW 151
PKV T++ YHPNI+ G++CL++LR W
Sbjct: 65 PKVAFTTRI-------------------------------YHPNINSNGSICLDILRSQW 93
Query: 152 KPVLNINTIIYGLYHLF 168
P L I+ ++ + L
Sbjct: 94 SPALTISKVLLSICSLL 110
>sp|Q1RMX2|UB2D2_BOVIN Ubiquitin-conjugating enzyme E2 D2 OS=Bos taurus GN=UBE2D2 PE=2
SV=1
Length = 147
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 32/137 (23%)
Query: 33 RLHKDITELNLPEACKISFPNGQDDLMNFEVSI-KPDEGYYQNGTFVFSFEVPPIYPHDA 91
R+HK++ +L + S DD+ +++ +I P++ YQ G F + P YP
Sbjct: 5 RIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKP 64
Query: 92 PKVKCKTKVDIFFLNFIHMLLLFNHAIKLELYTFESNLQVYHPNIDLEGNVCLNVLREDW 151
PKV T++ YHPNI+ G++CL++LR W
Sbjct: 65 PKVAFTTRI-------------------------------YHPNINSNGSICLDILRSQW 93
Query: 152 KPVLNINTIIYGLYHLF 168
P L I+ ++ + L
Sbjct: 94 SPALTISKVLLSICSLL 110
>sp|Q06AA9|UB2D2_PIG Ubiquitin-conjugating enzyme E2 D2 OS=Sus scrofa GN=UBE2D2 PE=2
SV=1
Length = 147
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 32/137 (23%)
Query: 33 RLHKDITELNLPEACKISFPNGQDDLMNFEVSI-KPDEGYYQNGTFVFSFEVPPIYPHDA 91
R+HK++ +L + S DD+ +++ +I P++ YQ G F + P YP
Sbjct: 5 RIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKP 64
Query: 92 PKVKCKTKVDIFFLNFIHMLLLFNHAIKLELYTFESNLQVYHPNIDLEGNVCLNVLREDW 151
PKV T++ YHPNI+ G++CL++LR W
Sbjct: 65 PKVAFTTRI-------------------------------YHPNINSNGSICLDILRSQW 93
Query: 152 KPVLNINTIIYGLYHLF 168
P L I+ ++ + L
Sbjct: 94 SPALTISKVLLSICSLL 110
>sp|P35133|UBC10_ARATH Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10
PE=1 SV=1
Length = 148
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 32/138 (23%)
Query: 33 RLHKDITELNLPEACKISFPNGQDDLMNFEVSI-KPDEGYYQNGTFVFSFEVPPIYPHDA 91
R+ K++ +L S +D+ +++ +I P E Y G F+ + PP YP
Sbjct: 5 RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKP 64
Query: 92 PKVKCKTKVDIFFLNFIHMLLLFNHAIKLELYTFESNLQVYHPNIDLEGNVCLNVLREDW 151
PKV +TKV +HPNI+ G++CL++L+E W
Sbjct: 65 PKVAFRTKV-------------------------------FHPNINSNGSICLDILKEQW 93
Query: 152 KPVLNINTIIYGLYHLFT 169
P L I+ ++ + L T
Sbjct: 94 SPALTISKVLLSICSLLT 111
>sp|P15731|UBC4_YEAST Ubiquitin-conjugating enzyme E2 4 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBC4 PE=1 SV=1
Length = 148
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 36/140 (25%)
Query: 33 RLHKDITEL--NLPEACKISFPNGQDDLMNFEVSI-KPDEGYYQNGTFVFSFEVPPIYPH 89
R+ K++++L + P +C P G DDL +++ SI P + Y G F S P YP
Sbjct: 6 RIAKELSDLERDPPTSCSAG-PVG-DDLYHWQASIMGPADSPYAGGVFFLSIHFPTDYPF 63
Query: 90 DAPKVKCKTKVDIFFLNFIHMLLLFNHAIKLELYTFESNLQVYHPNIDLEGNVCLNVLRE 149
PK+ TK+ YHPNI+ GN+CL++L++
Sbjct: 64 KPPKISFTTKI-------------------------------YHPNINANGNICLDILKD 92
Query: 150 DWKPVLNINTIIYGLYHLFT 169
W P L ++ ++ + L T
Sbjct: 93 QWSPALTLSKVLLSICSLLT 112
>sp|P35131|UBC8_ARATH Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8
PE=1 SV=1
Length = 148
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 32/138 (23%)
Query: 33 RLHKDITELNLPEACKISFPNGQDDLMNFEVSI-KPDEGYYQNGTFVFSFEVPPIYPHDA 91
R+ K++ +L S +D+ +++ +I P E Y G F+ + PP YP
Sbjct: 5 RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKP 64
Query: 92 PKVKCKTKVDIFFLNFIHMLLLFNHAIKLELYTFESNLQVYHPNIDLEGNVCLNVLREDW 151
PKV +TKV +HPNI+ G++CL++L+E W
Sbjct: 65 PKVAFRTKV-------------------------------FHPNINSNGSICLDILKEQW 93
Query: 152 KPVLNINTIIYGLYHLFT 169
P L I+ ++ + L T
Sbjct: 94 SPALTISKVLLSICSLLT 111
>sp|P70711|U2D2B_RAT Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norvegicus GN=Ube2d2b
PE=1 SV=1
Length = 147
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 36/139 (25%)
Query: 33 RLHKDITEL--NLPEACKISFPNGQDDLMNFEVSI-KPDEGYYQNGTFVFSFEVPPIYPH 89
R+HK++ +L + P C P G+D + +++ +I P++ YQ G F + + P YP
Sbjct: 5 RIHKELNDLAQDPPAQCSAG-PVGED-MFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPF 62
Query: 90 DAPKVKCKTKVDIFFLNFIHMLLLFNHAIKLELYTFESNLQVYHPNIDLEGNVCLNVLRE 149
PKV+ T++ YHPN++ G++CL++LR
Sbjct: 63 KPPKVEFTTRI-------------------------------YHPNVNSNGSICLDILRS 91
Query: 150 DWKPVLNINTIIYGLYHLF 168
W P L I+ ++ + L
Sbjct: 92 QWSPALTISKVLLSISSLL 110
>sp|Q6ZWY6|U2D2B_MOUSE Ubiquitin-conjugating enzyme E2 D2B OS=Mus musculus GN=Ube2d2b PE=2
SV=1
Length = 147
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 36/139 (25%)
Query: 33 RLHKDITEL--NLPEACKISFPNGQDDLMNFEVSI-KPDEGYYQNGTFVFSFEVPPIYPH 89
R+HK++ +L + P C P G+D + +++ +I P++ YQ G F + + P YP
Sbjct: 5 RIHKELNDLAQDPPAQCSAG-PVGED-MFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPF 62
Query: 90 DAPKVKCKTKVDIFFLNFIHMLLLFNHAIKLELYTFESNLQVYHPNIDLEGNVCLNVLRE 149
PKV+ T++ YHPN++ G++CL++LR
Sbjct: 63 KPPKVEFTTRI-------------------------------YHPNVNSNGSICLDILRS 91
Query: 150 DWKPVLNINTIIYGLYHLF 168
W P L I+ ++ + L
Sbjct: 92 QWSPALTISKVLLSISSLL 110
>sp|Q8S920|UBC5A_ORYSJ Ubiquitin-conjugating enzyme E2 5A OS=Oryza sativa subsp. japonica
GN=UBC5A PE=2 SV=1
Length = 147
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 36/140 (25%)
Query: 33 RLHKDITEL--NLPEACKISFPNGQDDLMNFEVSI-KPDEGYYQNGTFVFSFEVPPIYPH 89
R+ K++ +L + P +C P G+D + +++ +I P + Y G F+ + PP YP
Sbjct: 5 RIQKELKDLQKDPPTSCSAG-PVGED-MFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPF 62
Query: 90 DAPKVKCKTKVDIFFLNFIHMLLLFNHAIKLELYTFESNLQVYHPNIDLEGNVCLNVLRE 149
PKV +TKV +HPNI+ G++CL++L++
Sbjct: 63 KPPKVAFRTKV-------------------------------FHPNINSNGSICLDILKD 91
Query: 150 DWKPVLNINTIIYGLYHLFT 169
W P L I+ ++ + L T
Sbjct: 92 QWSPALTISKVLLSICSLLT 111
>sp|P35135|UBC4_SOLLC Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2
SV=1
Length = 148
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 32/138 (23%)
Query: 33 RLHKDITELNLPEACKISFPNGQDDLMNFEVSI-KPDEGYYQNGTFVFSFEVPPIYPHDA 91
R+ K++ +L S +D+ +++ +I P + Y G F+ S PP YP
Sbjct: 5 RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDYPFKP 64
Query: 92 PKVKCKTKVDIFFLNFIHMLLLFNHAIKLELYTFESNLQVYHPNIDLEGNVCLNVLREDW 151
PKV +TKV +HPNI+ G++CL++L+E W
Sbjct: 65 PKVAFRTKV-------------------------------FHPNINSNGSICLDILKEQW 93
Query: 152 KPVLNINTIIYGLYHLFT 169
P L I+ ++ + L T
Sbjct: 94 SPALTISKVLLSICSLLT 111
>sp|Q94A97|UBC35_ARATH Ubiquitin-conjugating enzyme E2 35 OS=Arabidopsis thaliana GN=UBC35
PE=1 SV=1
Length = 153
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 58/139 (41%), Gaps = 32/139 (23%)
Query: 33 RLHKDITELNLPEACKISFPNGQDDLMNFEVSI-KPDEGYYQNGTFVFSFEVPPIYPHDA 91
R+ K+ L A IS +D++ F V I P + Y+ G F +P YP A
Sbjct: 9 RIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAA 68
Query: 92 PKVKCKTKVDIFFLNFIHMLLLFNHAIKLELYTFESNLQVYHPNIDLEGNVCLNVLREDW 151
PKV+ TK+ YHPNID G +CL++L++ W
Sbjct: 69 PKVRFLTKI-------------------------------YHPNIDKLGRICLDILKDKW 97
Query: 152 KPVLNINTIIYGLYHLFTV 170
P L I T++ + L +
Sbjct: 98 SPALQIRTVLLSIQALLSA 116
>sp|Q8S919|UBC5B_ORYSJ Ubiquitin-conjugating enzyme E2 5B OS=Oryza sativa subsp. japonica
GN=UBC5B PE=2 SV=1
Length = 148
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 32/138 (23%)
Query: 33 RLHKDITELNLPEACKISFPNGQDDLMNFEVSI-KPDEGYYQNGTFVFSFEVPPIYPHDA 91
R+ K++ +L S +D+ +++ ++ P + Y G F+ + PP YP
Sbjct: 5 RILKELKDLQKDPPTSCSAGPVAEDMFHWQATLMGPSDSPYAGGVFLVTIHFPPDYPFKP 64
Query: 92 PKVKCKTKVDIFFLNFIHMLLLFNHAIKLELYTFESNLQVYHPNIDLEGNVCLNVLREDW 151
PKV KTKV +HPNI+ G++CL++L+E W
Sbjct: 65 PKVALKTKV-------------------------------FHPNINSNGSICLDILKEQW 93
Query: 152 KPVLNINTIIYGLYHLFT 169
P L I+ ++ + L T
Sbjct: 94 SPALTISKVLLSICSLLT 111
>sp|P35129|UBC2_CAEEL Ubiquitin-conjugating enzyme E2 2 OS=Caenorhabditis elegans
GN=let-70 PE=1 SV=1
Length = 147
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 57/137 (41%), Gaps = 32/137 (23%)
Query: 33 RLHKDITELNLPEACKISFPNGQDDLMNFEVSI-KPDEGYYQNGTFVFSFEVPPIYPHDA 91
R+ K++ +L + S DDL +++ +I P E YQ G F + P YP
Sbjct: 5 RIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKP 64
Query: 92 PKVKCKTKVDIFFLNFIHMLLLFNHAIKLELYTFESNLQVYHPNIDLEGNVCLNVLREDW 151
PKV T++ YHPNI+ G++CL++LR W
Sbjct: 65 PKVAFTTRI-------------------------------YHPNINSNGSICLDILRSQW 93
Query: 152 KPVLNINTIIYGLYHLF 168
P L I+ ++ + L
Sbjct: 94 SPALTISKVLLSICSLL 110
>sp|Q9VTY6|UBE2C_DROME Ubiquitin-conjugating enzyme E2 C OS=Drosophila melanogaster GN=vih
PE=1 SV=1
Length = 178
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 32/155 (20%)
Query: 15 AENNTGGTPVKKQCAGELRLHKDITELNLPEACKIS-FPNGQDDLMNFEVSIKPDEGYYQ 73
++++ PVK A RLHK++ L + IS FP+G++ P Y
Sbjct: 18 SKHSDDSMPVKDNHAVSKRLHKELMNLMMANERGISAFPDGENIFKWVGTIAGPRNTVYS 77
Query: 74 NGTFVFSFEVPPIYPHDAPKVKCKTKVDIFFLNFIHMLLLFNHAIKLELYTFESNLQVYH 133
T+ S + P YP+ AP VK T +H
Sbjct: 78 GQTYRLSLDFPNSYPYAAPVVKFLT-------------------------------SCFH 106
Query: 134 PNIDLEGNVCLNVLREDWKPVLNINTIIYGLYHLF 168
PN+DL+G +CL++L++ W + ++ TI+ + L
Sbjct: 107 PNVDLQGAICLDILKDKWSALYDVRTILLSIQSLL 141
>sp|P46595|UBC4_SCHPO Ubiquitin-conjugating enzyme E2 4 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubc4 PE=2 SV=1
Length = 147
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 36/140 (25%)
Query: 33 RLHKDITEL--NLPEACKISFPNGQDDLMNFEVSI-KPDEGYYQNGTFVFSFEVPPIYPH 89
R+++++ +L + P +C P G DDL +++ +I P + Y G F S P YP
Sbjct: 5 RINRELADLGKDPPSSCSAG-PVG-DDLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPF 62
Query: 90 DAPKVKCKTKVDIFFLNFIHMLLLFNHAIKLELYTFESNLQVYHPNIDLEGNVCLNVLRE 149
PKV T++ YHPNI+ G++CL++LR+
Sbjct: 63 KPPKVNFTTRI-------------------------------YHPNINSNGSICLDILRD 91
Query: 150 DWKPVLNINTIIYGLYHLFT 169
W P L I+ ++ + L T
Sbjct: 92 QWSPALTISKVLLSICSLLT 111
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.142 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,472,135
Number of Sequences: 539616
Number of extensions: 3124216
Number of successful extensions: 5978
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 5523
Number of HSP's gapped (non-prelim): 448
length of query: 182
length of database: 191,569,459
effective HSP length: 110
effective length of query: 72
effective length of database: 132,211,699
effective search space: 9519242328
effective search space used: 9519242328
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 57 (26.6 bits)