BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030127
(182 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O23193|CBSX1_ARATH CBS domain-containing protein CBSX1, chloroplastic OS=Arabidopsis
thaliana GN=CBSX1 PE=1 SV=2
Length = 236
Score = 172 bits (437), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 85/117 (72%), Positives = 97/117 (82%), Gaps = 1/117 (0%)
Query: 62 SSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPV 121
S++ A TL NS++P SGVYTVG+FMT KE+LHVVKPTTTVDEALE+LVE RITGFPV
Sbjct: 54 SASSAAGSTLMTNSSSPRSGVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPV 113
Query: 122 IDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGR 178
ID+DWKLVGLVSDYDLLALDSISGSGR +NSMFPEVDSTWK + + L K G+
Sbjct: 114 IDEDWKLVGLVSDYDLLALDSISGSGRTENSMFPEVDSTWKTFNA-VQKLLSKTNGK 169
Score = 38.1 bits (87), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVS 133
VGD MT VV+ T +++A +IL+E + PV+D D KLVG+++
Sbjct: 171 VGDLMTPAP--LVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIIT 217
>sp|Q9C5D0|CBSX2_ARATH CBS domain-containing protein CBSX2, chloroplastic OS=Arabidopsis
thaliana GN=CBSX2 PE=1 SV=1
Length = 238
Score = 140 bits (352), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 72/130 (55%), Positives = 93/130 (71%), Gaps = 12/130 (9%)
Query: 60 RRSSAVFASGTLTANSAAPSS-----------GVYTVGDFMTTKEELHVVKPTTTVDEAL 108
RRSS S T++A AAP+S G YTVGDFMT ++ LHVVKP+T+VD+AL
Sbjct: 43 RRSSTFSPSITVSAFFAAPASVNNNNSVPAKNGGYTVGDFMTPRQNLHVVKPSTSVDDAL 102
Query: 109 EILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKVHSTRC 168
E+LVEK++TG PVIDD+W LVG+VSDYDLLALDSISG + D ++FP+VDSTWK +
Sbjct: 103 ELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTWKTFN-EL 161
Query: 169 RSCLVKPMGR 178
+ + K G+
Sbjct: 162 QKLISKTYGK 171
Score = 36.2 bits (82), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVS 133
VGD MT VV+ +T +++A +L+E + PV+D D KL+G+++
Sbjct: 173 VGDLMTPSP--LVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILT 219
>sp|P42851|IMDH_PYRFU Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=guaB
PE=3 SV=1
Length = 485
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 69 GTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKL 128
G +T A G TV + MT E+ V + V+EAL+I++E RI PV+++D KL
Sbjct: 137 GIITKKDIAAREG-RTVKELMT--REVITVPESVDVEEALKIMMENRIDRLPVVNEDGKL 193
Query: 129 VGLVSDYDLLA 139
VGL++ DL+A
Sbjct: 194 VGLITMSDLVA 204
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 139
E++ + P T+D AL ++ + I G PV+++D ++VG+++ D+ A
Sbjct: 101 EDVITIAPDETIDYALFLMEKHGIDGLPVVEED-RVVGIITKKDIAA 146
>sp|O58045|IMDH_PYRHO Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3) GN=guaB PE=1 SV=1
Length = 486
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 69 GTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKL 128
G +T A G V + MT +E+ V + V+EAL+I++E RI PV+D+ KL
Sbjct: 137 GIITKKDIAAREG-KLVKELMT--KEVITVPESIEVEEALKIMIENRIDRLPVVDERGKL 193
Query: 129 VGLVSDYDLLALDSISGSGRADNS 152
VGL++ DL+A + R +N
Sbjct: 194 VGLITMSDLVARKKYKNAVRDENG 217
Score = 33.1 bits (74), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 139
E++ + P TVD AL ++ + I G PV++D+ K+VG+++ D+ A
Sbjct: 101 EDVITIAPDETVDFALFLMEKHGIDGLPVVEDE-KVVGIITKKDIAA 146
>sp|O67820|IMDH_AQUAE Inosine-5'-monophosphate dehydrogenase OS=Aquifex aeolicus (strain
VF5) GN=guaB PE=3 SV=1
Length = 490
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 32/40 (80%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
VKP T V EAL+I+ + +I+G PV+D++ KL+G++++ DL
Sbjct: 103 VKPDTRVKEALDIMAKYKISGVPVVDEERKLIGILTNRDL 142
Score = 37.7 bits (86), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
V +FMT KE L T+DEA EI + +I P++D + K+ GL++ D++
Sbjct: 154 VSEFMT-KENLITAPEGITLDEAEEIFRKYKIEKLPIVDKEGKIKGLITIKDIV 206
>sp|Q9UGJ0|AAKG2_HUMAN 5'-AMP-activated protein kinase subunit gamma-2 OS=Homo sapiens
GN=PRKAG2 PE=1 SV=1
Length = 569
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 91 TKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140
T + + P T + +AL I VE+RI+ PV+D+ K+V + S +D++ L
Sbjct: 432 TYHNIAFIHPDTPIIKALNIFVERRISALPVVDESGKVVDIYSKFDVINL 481
>sp|Q9UY49|IMDH_PYRAB Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus abyssi (strain
GE5 / Orsay) GN=guaB PE=3 SV=1
Length = 485
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 69 GTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKL 128
G ++ A G V + MT +++ V V+EAL+I++E RI PV+D + +L
Sbjct: 137 GIISKKDIAAREG-KLVKELMT--KDVITVPENIEVEEALKIMIENRIDRLPVVDKEGRL 193
Query: 129 VGLVSDYDLLALDSISGSGRADNS 152
+GL++ DL+A + R +N
Sbjct: 194 IGLITMSDLVARKKYKNAVRDENG 217
Score = 33.1 bits (74), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 139
E++ + P TVD AL ++ + I G PV++++ K+VG++S D+ A
Sbjct: 101 EDVITISPEETVDFALFLMEKHDIDGLPVVENE-KVVGIISKKDIAA 146
>sp|Q5R4S0|AAKG2_PONAB 5'-AMP-activated protein kinase subunit gamma-2 OS=Pongo abelii
GN=PRKAG2 PE=2 SV=1
Length = 524
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 91 TKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140
T + + P T + +AL I VE+RI+ PV+D+ K+V + S +D++ L
Sbjct: 387 TYHNIAFIHPDTPIIKALNIFVERRISALPVVDESGKVVDIYSKFDVINL 436
>sp|P21879|IMDH_BACSU Inosine-5'-monophosphate dehydrogenase OS=Bacillus subtilis (strain
168) GN=guaB PE=1 SV=2
Length = 488
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
+ D MT KEEL TT+DEA +IL + +I P++DD KL GL++ D+
Sbjct: 153 ISDVMT-KEELVTASVGTTLDEAEKILQKHKIEKLPLVDDQNKLKGLITIKDI 204
>sp|Q91WG5|AAKG2_MOUSE 5'-AMP-activated protein kinase subunit gamma-2 OS=Mus musculus
GN=Prkag2 PE=1 SV=2
Length = 566
Score = 40.8 bits (94), Expect = 0.005, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 91 TKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140
T + + P T + +AL I VE+RI+ PV+D+ K+V + S +D++ L
Sbjct: 429 TYHNIAFIHPDTPIIKALNIFVERRISALPVVDESGKVVDIYSKFDVINL 478
>sp|Q9LEV3|CBSX3_ARATH CBS domain-containing protein CBSX3, mitochondrial OS=Arabidopsis
thaliana GN=CBSX3 PE=1 SV=1
Length = 206
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
SS VGD MT + +L V P T V A++++ + RI PVI D ++G+VS D++
Sbjct: 126 SSKSTKVGDIMTEENKLITVTPETKVLRAMQLMTDNRIRHIPVIKDKG-MIGMVSIGDVV 184
>sp|Q8BGM7|AAKG3_MOUSE 5'-AMP-activated protein kinase subunit gamma-3 OS=Mus musculus
GN=Prkag3 PE=1 SV=1
Length = 489
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 78 PSSGVYTVGDF-MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYD 136
PS T+ D + T +L VV T V AL+I V++R++ PV+++ ++VGL S +D
Sbjct: 341 PSFLCRTIQDLGIGTFRDLAVVLETAPVLTALDIFVDRRVSALPVVNESGQVVGLYSRFD 400
Query: 137 LLALDSISGSGRADNSM 153
++ L + D S+
Sbjct: 401 VIHLAAQQTYNHLDMSV 417
>sp|Q2LL38|AAKG3_BOVIN 5'-AMP-activated protein kinase subunit gamma-3 OS=Bos taurus
GN=PRKAG3 PE=2 SV=2
Length = 497
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 78 PSSGVYTVGDF-MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYD 136
PS T+ D + T +L VV T + AL+I V++R++ PVI++ ++VGL S +D
Sbjct: 349 PSFLYRTIQDLGIGTFRDLAVVLETAPILTALDIFVDRRVSALPVINEAGQVVGLYSRFD 408
Query: 137 LLALDSISGSGRADNSM 153
++ L + D S+
Sbjct: 409 VIHLAAQQTYNHLDISV 425
>sp|A9A5Y7|IMDH_NITMS Inosine-5'-monophosphate dehydrogenase OS=Nitrosopumilus maritimus
(strain SCM1) GN=guaB PE=3 SV=1
Length = 476
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 77 APSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYD 136
A S+G T+ D MT +++ KP ++DEA +IL + RI P++DD + GL++ D
Sbjct: 141 AGSNG--TIADVMT--KDVVTAKPGVSLDEAKDILHKHRIEKLPIVDDSGIIQGLITSKD 196
Query: 137 L 137
+
Sbjct: 197 I 197
Score = 35.4 bits (80), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 29/46 (63%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
E + + ++ +AL+ +K I+G V+D + KLVG+V++ DLL
Sbjct: 94 ENPYSISSDKSIQDALDYAEDKEISGLLVVDSNSKLVGIVTERDLL 139
>sp|P44334|IMDH_HAEIN Inosine-5'-monophosphate dehydrogenase OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=guaB PE=3
SV=1
Length = 488
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
TV MT KE+L VK + +E LE++ + R+ V++D +KL G+++ D
Sbjct: 149 TVSQVMTKKEDLVTVKEGASREEILELMHQHRVEKVLVVNDSFKLKGMITVKDF 202
Score = 30.8 bits (68), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYD 136
V P T+ E E++ + G+PV+D + L+G+++ D
Sbjct: 101 VLPNLTLAELAEMVKKNGFAGYPVVDGENNLIGIITGRD 139
>sp|Q58821|Y1426_METJA Uncharacterized protein MJ1426 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1426 PE=4 SV=1
Length = 168
Score = 39.7 bits (91), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
V D MT K + V KP T+++A +++V+ I PV+DD+ L+G+V+ DL+
Sbjct: 113 VRDVMTRK--VIVAKPDMTINDAAKLMVKNNIKRLPVVDDEGNLIGIVTRGDLI 164
>sp|Q9UGI9|AAKG3_HUMAN 5'-AMP-activated protein kinase subunit gamma-3 OS=Homo sapiens
GN=PRKAG3 PE=1 SV=3
Length = 489
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 78 PSSGVYTVGDF-MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYD 136
PS T+ D + T +L VV T + AL+I V++R++ PV+++ ++VGL S +D
Sbjct: 341 PSFLYRTIQDLGIGTFRDLAVVLETAPILTALDIFVDRRVSALPVVNECGQVVGLYSRFD 400
Query: 137 LLALDSISGSGRADNSM 153
++ L + D S+
Sbjct: 401 VIHLAAQQTYNHLDMSV 417
>sp|Q59011|IMDH_METJA Inosine-5'-monophosphate dehydrogenase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=guaB PE=3 SV=1
Length = 496
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141
V P TV EA+ ++ I+G PV+D++ KLVG+++ D+ A++
Sbjct: 103 VSPDDTVGEAINVMETYSISGLPVVDNEDKLVGIITHRDVKAIE 146
>sp|Q9MYP4|AAKG3_PIG 5'-AMP-activated protein kinase subunit gamma-3 OS=Sus scrofa
GN=PRKAG3 PE=1 SV=2
Length = 514
Score = 39.3 bits (90), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 78 PSSGVYTVGDF-MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYD 136
PS T+ D + T +L VV T + AL+I V++R++ PV+++ ++VGL S +D
Sbjct: 366 PSFLYRTIQDLGIGTFRDLAVVLETAPILTALDIFVDRRVSALPVVNETGQVVGLYSRFD 425
Query: 137 LLAL 140
++ L
Sbjct: 426 VIHL 429
>sp|Q9L6B7|IMDH_PASMU Inosine-5'-monophosphate dehydrogenase OS=Pasteurella multocida
(strain Pm70) GN=guaB PE=3 SV=1
Length = 487
Score = 38.9 bits (89), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVS--DY 135
TV DFMT K L VK + DE ++ R+ V+ DD+KL G+++ DY
Sbjct: 148 TVADFMTPKARLVTVKRNASRDEIFGLMHTHRVEKVLVVSDDFKLKGMITLKDY 201
Score = 33.1 bits (74), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYD 136
V PT ++ E E++ + FPV+DD+ LVG+++ D
Sbjct: 100 VSPTLSLAELSELVKKNGFASFPVVDDEKNLVGIITGRD 138
>sp|P50100|Y525_METKA Uncharacterized protein MK0525 OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=MK0525 PE=4
SV=2
Length = 196
Score = 38.5 bits (88), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 32/44 (72%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141
V+ V+EA++++V+K I P++DD+ KL+G+V+ D+L ++
Sbjct: 83 VEEDMEVNEAVKLMVDKGIRRLPIVDDNGKLIGIVTMQDILQVE 126
>sp|Q0WD32|IMDH_YERPE Inosine-5'-monophosphate dehydrogenase OS=Yersinia pestis GN=guaB
PE=3 SV=1
Length = 487
Score = 38.1 bits (87), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 27/44 (61%)
Query: 94 ELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
E V PTTT+ + E+ G+PV+ +D++LVG+++ D+
Sbjct: 96 EPQTVTPTTTLRQVKELTARNGFAGYPVVTEDYELVGIITGRDV 139
Score = 33.9 bits (76), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 89 MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
MT KE L VK T + L+ + EKR+ V+DD + L G+++ D
Sbjct: 153 MTPKERLVTVKEGETREVVLQKMHEKRVEKVLVVDDSFHLRGMITVKDF 201
>sp|Q9KGN8|IMDH_BACHD Inosine-5'-monophosphate dehydrogenase OS=Bacillus halodurans
(strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153
/ C-125) GN=guaB PE=3 SV=1
Length = 485
Score = 37.4 bits (85), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 9/66 (13%)
Query: 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
SGV T F+T P V +A ++ + RI+G P++D+D KLVG++++ DL
Sbjct: 92 ESGVITNPFFLT---------PDRQVFDAEHLMGKYRISGVPIVDEDQKLVGILTNRDLR 142
Query: 139 ALDSIS 144
++ S
Sbjct: 143 FIEDYS 148
Score = 34.7 bits (78), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
T+ D + TKE L TT+ EA EIL + +I P++D+ L GL++ D+
Sbjct: 149 TLIDDVMTKENLVTAPVGTTLKEAEEILQKHKIEKLPLVDESGTLKGLITIKDI 202
>sp|O67500|Y1546_AQUAE Uncharacterized phosphosugar isomerase aq_1546 OS=Aquifex aeolicus
(strain VF5) GN=aq_1546 PE=3 SV=1
Length = 322
Score = 37.0 bits (84), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
V D T EE+ +VK T++ EA+ + K V++++ KLVG+++D DL
Sbjct: 199 VKDLYHTGEEVPIVKEDTSMKEAIIEMTAKGFGATAVVNEEGKLVGIITDGDL 251
>sp|Q58622|Y1225_METJA Uncharacterized protein MJ1225 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1225 PE=1 SV=1
Length = 280
Score = 37.0 bits (84), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 92 KEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL--ALDSISGSGRA 149
+E + +K +DEA+E + K + G P+++D+ +L+ L+++ D++ LD I +
Sbjct: 91 EENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVIRALLDKIDENEVI 150
Query: 150 DNSMFPEV 157
D+ + +V
Sbjct: 151 DDYITRDV 158
>sp|P50097|IMDH_TRIFO Inosine-5'-monophosphate dehydrogenase OS=Tritrichomonas foetus
GN=IMPDH PE=1 SV=1
Length = 503
Score = 36.6 bits (83), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLV--SDYD 136
V D MT +L T + EA +I+ EK++ P+IDDD L +V DYD
Sbjct: 163 VSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYD 216
>sp|Q9HLK8|IMDH_THEAC Inosine-5'-monophosphate dehydrogenase OS=Thermoplasma acidophilum
(strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 /
AMRC-C165) GN=guaB PE=3 SV=1
Length = 485
Score = 36.6 bits (83), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 24/35 (68%)
Query: 104 VDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
+DEA+EIL + RI P++D LVGL++ D++
Sbjct: 168 IDEAIEILHKNRIEKLPLVDSSGHLVGLITAKDII 202
Score = 34.7 bits (78), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 94 ELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
+++ + P T ++ A ++ + I G PV+ DD KLVG+V+ DL
Sbjct: 100 DVYTISPETPIEVARTLMATRNIAGLPVVKDD-KLVGIVTKRDL 142
>sp|Q58053|Y636_METJA Uncharacterized protein MJ0636 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0636 PE=4 SV=1
Length = 397
Score = 36.6 bits (83), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 105 DEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKVH 164
DE + + K++ F +I+D +L L+ D + +I G+GR + V + KV+
Sbjct: 198 DEEIRDYLMKKVINFKIINDKEELENLLKDESYTKILAIGGNGRFKTDDYLRVLNEEKVY 257
Query: 165 STRCRSCLVKPMGR 178
+ C CL+ G
Sbjct: 258 A--CGDCLINGGGN 269
>sp|P65167|IMDH_MYCTU Inosine-5'-monophosphate dehydrogenase OS=Mycobacterium
tuberculosis GN=guaB PE=1 SV=1
Length = 529
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 99 KPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
+P T+ + + RI+G PV+DDD LVG++++ D+
Sbjct: 137 RPDNTLAQVDALCARFRISGLPVVDDDGALVGIITNRDM 175
>sp|P65168|IMDH_MYCBO Inosine-5'-monophosphate dehydrogenase OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=guaB PE=3 SV=1
Length = 529
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 99 KPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
+P T+ + + RI+G PV+DDD LVG++++ D+
Sbjct: 137 RPDNTLAQVDALCARFRISGLPVVDDDGALVGIITNRDM 175
>sp|P12904|AAKG_YEAST 5'-AMP-activated protein kinase subunit gamma OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SNF4 PE=1
SV=1
Length = 322
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 85 VGDF-MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
+GD + T++ + + TT V + +++L + R++ P+ID++ L+ + YD+L L I
Sbjct: 188 IGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGL--I 245
Query: 144 SGSGRADNSM 153
G D S+
Sbjct: 246 KGGIYNDLSL 255
>sp|Q57892|Y450_METJA Uncharacterized protein MJ0450 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0450 PE=4 SV=1
Length = 186
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140
P TT+DEALEI+ K T I DD K+VG++++ DL+ +
Sbjct: 87 PNTTIDEALEIM-NKYKTNELFIVDDGKIVGVITEEDLIKI 126
>sp|Q3SWY3|IMDH2_BOVIN Inosine-5'-monophosphate dehydrogenase 2 OS=Bos taurus GN=IMPDH2
PE=2 SV=1
Length = 514
Score = 35.8 bits (81), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 32/53 (60%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
+G+ MT +E+L V T+ EA EIL + P+++++ +LV +++ DL
Sbjct: 175 LGEIMTKREDLVVAPAGITLKEANEILQRSKKGKLPIVNENDELVAIIARTDL 227
>sp|P80385|AAKG1_RAT 5'-AMP-activated protein kinase subunit gamma-1 OS=Rattus
norvegicus GN=Prkag1 PE=1 SV=3
Length = 330
Score = 35.8 bits (81), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 9/76 (11%)
Query: 87 DFMTTK-EELHV--------VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
+FM+ EEL + V+ TT V AL I V+ R++ PV+D+ ++V + S +D+
Sbjct: 186 EFMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDV 245
Query: 138 LALDSISGSGRADNSM 153
+ L + D S+
Sbjct: 246 INLAAEKTYNNLDVSV 261
>sp|Q58629|Y1232_METJA Uncharacterized protein MJ1232 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1232 PE=4 SV=1
Length = 296
Score = 35.8 bits (81), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 6/63 (9%)
Query: 75 SAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSD 134
S+ P+ V VG +E+ + P T+ E ++ EK I+G PV+D+D KLVG++S
Sbjct: 165 SSIPNIKVGDVG-----IKEVWTINPNCTLRETAKLFAEKYISGAPVVDND-KLVGVISL 218
Query: 135 YDL 137
+D+
Sbjct: 219 HDI 221
>sp|Q09138|AAKG1_PIG 5'-AMP-activated protein kinase subunit gamma-1 OS=Sus scrofa
GN=PRKAG1 PE=1 SV=2
Length = 330
Score = 35.8 bits (81), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 9/63 (14%)
Query: 87 DFMTTK-EELHV--------VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
+FM+ EEL + V+ TT V AL I V+ R++ PV+D+ ++V + S +D+
Sbjct: 187 EFMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDV 246
Query: 138 LAL 140
+ L
Sbjct: 247 INL 249
>sp|P58108|AAKG1_BOVIN 5'-AMP-activated protein kinase subunit gamma-1 OS=Bos taurus
GN=PRKAG1 PE=2 SV=2
Length = 330
Score = 35.8 bits (81), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 9/76 (11%)
Query: 87 DFMTTK-EELHV--------VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
+FM+ EEL + V+ TT V AL I V+ R++ PV+D+ ++V + S +D+
Sbjct: 187 EFMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDV 246
Query: 138 LALDSISGSGRADNSM 153
+ L + D S+
Sbjct: 247 INLAAEKTYNNLDVSV 262
>sp|P54619|AAKG1_HUMAN 5'-AMP-activated protein kinase subunit gamma-1 OS=Homo sapiens
GN=PRKAG1 PE=1 SV=1
Length = 331
Score = 35.8 bits (81), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 9/63 (14%)
Query: 87 DFMTTK-EELHV--------VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
+FM+ EEL + V+ TT V AL I V+ R++ PV+D+ ++V + S +D+
Sbjct: 187 EFMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDV 246
Query: 138 LAL 140
+ L
Sbjct: 247 INL 249
>sp|O54950|AAKG1_MOUSE 5'-AMP-activated protein kinase subunit gamma-1 OS=Mus musculus
GN=Prkag1 PE=1 SV=2
Length = 330
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 97 VVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 153
+V+ TT V AL I V+ R++ PV+D+ ++V + S +D++ L + D S+
Sbjct: 205 MVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVSV 261
>sp|P12268|IMDH2_HUMAN Inosine-5'-monophosphate dehydrogenase 2 OS=Homo sapiens GN=IMPDH2
PE=1 SV=2
Length = 514
Score = 35.0 bits (79), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
+ MT +E+L V T+ EA EIL + P++++D +LV +++ DL
Sbjct: 177 EIMTKREDLVVAPAGITLKEANEILQRSKKGKLPIVNEDDELVAIIARTDL 227
>sp|Q7UJL3|IMDH_RHOBA Inosine-5'-monophosphate dehydrogenase OS=Rhodopirellula baltica
(strain SH1) GN=guaB PE=3 SV=1
Length = 539
Score = 34.7 bits (78), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 91 TKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVS--DYDLL 138
T+E L T+ +A +IL EKR+ +ID++ KL GL++ D D++
Sbjct: 201 TRENLVTAVGNVTLAQAEKILTEKRVEKLLLIDEERKLTGLITIRDIDMM 250
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141
+ P V A E++ ++G P+++DD L G+++ DL L+
Sbjct: 147 LNPAQKVSAAAELMDRANVSGIPIVEDDRTLAGILTRRDLRFLE 190
>sp|Q8CMQ7|IMDH_STAES Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=guaB PE=3 SV=1
Length = 488
Score = 34.3 bits (77), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 100 PTTTVDEALEILVEKRITGFPVID--DDWKLVGLVSDYDLLALDSIS 144
P +V EA ++ + RI+G P++D +D KL+G++++ DL ++ S
Sbjct: 104 PEESVYEAEALMGKYRISGVPIVDNQEDRKLIGILTNRDLRFIEDFS 150
>sp|Q5HRX2|IMDH_STAEQ Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=guaB PE=3
SV=1
Length = 488
Score = 34.3 bits (77), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 100 PTTTVDEALEILVEKRITGFPVID--DDWKLVGLVSDYDLLALDSIS 144
P +V EA ++ + RI+G P++D +D KL+G++++ DL ++ S
Sbjct: 104 PEESVYEAEALMGKYRISGVPIVDNQEDRKLIGILTNRDLRFIEDFS 150
>sp|O31698|YKUL_BACSU CBS domain-containing protein YkuL OS=Bacillus subtilis (strain
168) GN=ykuL PE=1 SV=1
Length = 147
Score = 34.3 bits (77), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TVG FM +++ V+ ++ AL +L + T PV+D ++L GL+ + ++SI
Sbjct: 13 TVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTN--MIMNSI 70
Query: 144 SGSGRADNSMFPEVDS 159
G R + F ++D
Sbjct: 71 FGLERIE---FEKLDQ 83
>sp|P32987|YBP3_ACIAM Uncharacterized 17.7 kDa protein in bps2 3'region OS=Acidianus
ambivalens PE=4 SV=1
Length = 164
Score = 34.3 bits (77), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
V TTK ++VVKP T+ EA + + E + VID ++VG++++ D++
Sbjct: 5 VSQIATTK--VYVVKPNVTIAEAAKEMKEHNLGSLVVIDSQNRVVGIITERDIV 56
>sp|P50095|IMDH3_YEAST Inosine-5'-monophosphate dehydrogenase 3 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=IMD3 PE=1
SV=1
Length = 523
Score = 33.9 bits (76), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 97 VVKPTTTVDEALEILVEKRITGFPVIDD---DWKLVGLVSDYDL 137
V+ PTTTV EA + +GFPV +D + KL+G+V+ D+
Sbjct: 127 VISPTTTVGEAKSMKERFGFSGFPVTEDGKRNGKLMGIVTSRDI 170
>sp|Q944A6|SNF4_ARATH Sucrose nonfermenting 4-like protein OS=Arabidopsis thaliana
GN=SNF4 PE=1 SV=1
Length = 487
Score = 33.9 bits (76), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 31/51 (60%)
Query: 90 TTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140
++ + L ++P ++ AL +LV+ ++ PV+DD+ L+ + S D+ AL
Sbjct: 349 SSSKPLATLRPHASLGSALALLVQAEVSSIPVVDDNDSLIDIYSRSDITAL 399
>sp|Q54H97|Y8960_DICDI CBS domain-containing protein DDB_G0289609 OS=Dictyostelium
discoideum GN=DDB_G0289609 PE=2 SV=1
Length = 145
Score = 33.9 bits (76), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 102 TTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL-LALDS 142
TT+D AL+ L I PV+D+D L G+++D DL LA DS
Sbjct: 20 TTLDVALKSLNANSIHRLPVVDNDGNLKGIITDRDLRLATDS 61
>sp|P0ADG9|IMDH_SHIFL Inosine-5'-monophosphate dehydrogenase OS=Shigella flexneri GN=guaB
PE=3 SV=1
Length = 488
Score = 33.9 bits (76), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 88 FMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
+MT KE L V+ + L + EKR+ V+DD++ L+G+++ D
Sbjct: 152 YMTPKERLVTVREGEAREVVLAKMHEKRVEKALVVDDEFHLIGMITVKDF 201
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 96 HVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
V PTTT+ E E+ G+PV+ ++ +LVG+++ D+
Sbjct: 98 QTVLPTTTLREVKELTERNGFAGYPVVTEENELVGIITGRDV 139
>sp|P0ADG7|IMDH_ECOLI Inosine-5'-monophosphate dehydrogenase OS=Escherichia coli (strain
K12) GN=guaB PE=1 SV=1
Length = 488
Score = 33.9 bits (76), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 88 FMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
+MT KE L V+ + L + EKR+ V+DD++ L+G+++ D
Sbjct: 152 YMTPKERLVTVREGEAREVVLAKMHEKRVEKALVVDDEFHLIGMITVKDF 201
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 96 HVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
V PTTT+ E E+ G+PV+ ++ +LVG+++ D+
Sbjct: 98 QTVLPTTTLREVKELTERNGFAGYPVVTEENELVGIITGRDV 139
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.132 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,113,225
Number of Sequences: 539616
Number of extensions: 2494952
Number of successful extensions: 6333
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 6166
Number of HSP's gapped (non-prelim): 215
length of query: 182
length of database: 191,569,459
effective HSP length: 110
effective length of query: 72
effective length of database: 132,211,699
effective search space: 9519242328
effective search space used: 9519242328
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)