Query 030127
Match_columns 182
No_of_seqs 269 out of 1559
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 14:19:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030127.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030127hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jtf_A Magnesium and cobalt ef 99.7 3.3E-16 1.1E-20 114.6 10.2 98 81-178 3-126 (129)
2 3k6e_A CBS domain protein; str 99.7 1.8E-16 6.1E-21 120.8 9.0 94 83-178 15-142 (156)
3 4esy_A CBS domain containing m 99.7 2.7E-16 9.1E-21 120.4 8.6 95 81-178 16-162 (170)
4 3nqr_A Magnesium and cobalt ef 99.6 6.8E-16 2.3E-20 112.5 9.3 97 82-178 2-126 (127)
5 3gby_A Uncharacterized protein 99.6 1.5E-15 5.1E-20 110.6 11.0 96 81-179 3-127 (128)
6 3hf7_A Uncharacterized CBS-dom 99.6 6.4E-16 2.2E-20 113.5 8.8 97 83-179 2-128 (130)
7 3lv9_A Putative transporter; C 99.6 1.1E-15 3.7E-20 114.0 9.7 101 79-179 19-146 (148)
8 3i8n_A Uncharacterized protein 99.6 4.1E-16 1.4E-20 114.1 7.1 99 80-178 3-129 (130)
9 3lfr_A Putative metal ION tran 99.6 5.6E-16 1.9E-20 114.5 7.9 98 82-179 2-128 (136)
10 3kpb_A Uncharacterized protein 99.6 1.5E-15 5E-20 109.2 8.2 94 83-178 1-120 (122)
11 3ocm_A Putative membrane prote 99.6 3.6E-15 1.2E-19 115.4 9.0 101 79-179 32-158 (173)
12 3lhh_A CBS domain protein; str 99.6 4.9E-15 1.7E-19 113.8 9.5 101 79-179 38-165 (172)
13 2p9m_A Hypothetical protein MJ 99.6 1.6E-14 5.6E-19 105.7 11.6 97 81-179 6-137 (138)
14 2ef7_A Hypothetical protein ST 99.6 1.8E-14 6.1E-19 105.1 10.6 95 81-178 2-125 (133)
15 3lqn_A CBS domain protein; csg 99.6 5E-15 1.7E-19 110.3 7.7 98 80-179 12-144 (150)
16 3oi8_A Uncharacterized protein 99.6 5.8E-15 2E-19 111.5 7.7 95 79-173 34-155 (156)
17 4gqw_A CBS domain-containing p 99.6 2E-14 7E-19 106.4 10.4 98 81-178 3-143 (152)
18 3oco_A Hemolysin-like protein 99.6 3.7E-15 1.3E-19 112.0 5.9 100 80-179 17-144 (153)
19 2yzi_A Hypothetical protein PH 99.5 3.5E-14 1.2E-18 104.1 10.1 97 80-179 4-130 (138)
20 3sl7_A CBS domain-containing p 99.5 3E-14 1E-18 108.6 10.1 98 81-178 2-156 (180)
21 3kxr_A Magnesium transporter, 99.5 5.7E-14 1.9E-18 111.6 11.7 97 80-178 51-174 (205)
22 1pbj_A Hypothetical protein; s 99.5 2.3E-14 8E-19 103.0 8.6 93 83-179 1-123 (125)
23 3ctu_A CBS domain protein; str 99.5 1.8E-14 6.3E-19 108.0 8.3 97 81-179 13-143 (156)
24 1yav_A Hypothetical protein BS 99.5 4.3E-14 1.5E-18 106.5 10.1 99 79-179 10-143 (159)
25 3fhm_A Uncharacterized protein 99.5 2E-14 6.7E-19 109.3 7.7 100 78-178 19-150 (165)
26 3fv6_A YQZB protein; CBS domai 99.5 5.4E-14 1.8E-18 106.2 9.6 97 79-178 13-144 (159)
27 2o16_A Acetoin utilization pro 99.5 6.5E-14 2.2E-18 106.0 9.4 95 81-178 3-135 (160)
28 2rih_A Conserved protein with 99.5 6.8E-14 2.3E-18 103.2 9.2 94 82-177 4-127 (141)
29 1y5h_A Hypothetical protein RV 99.5 3.4E-14 1.2E-18 103.6 7.4 95 81-178 6-131 (133)
30 2emq_A Hypothetical conserved 99.5 6.1E-14 2.1E-18 104.9 9.0 98 80-179 8-140 (157)
31 3k2v_A Putative D-arabinose 5- 99.5 4.2E-14 1.4E-18 105.6 8.1 92 82-174 27-148 (149)
32 2rc3_A CBS domain; in SITU pro 99.5 7.9E-14 2.7E-18 102.0 9.1 91 84-178 7-131 (135)
33 1pvm_A Conserved hypothetical 99.5 7.1E-14 2.4E-18 108.1 8.9 94 83-178 9-133 (184)
34 1o50_A CBS domain-containing p 99.5 2.2E-13 7.6E-18 102.5 10.4 100 78-180 11-155 (157)
35 2nyc_A Nuclear protein SNF4; b 99.4 4.6E-13 1.6E-17 98.3 9.8 96 81-178 6-141 (144)
36 2pfi_A Chloride channel protei 99.4 3.5E-13 1.2E-17 101.1 9.2 96 80-178 10-147 (164)
37 2oux_A Magnesium transporter; 99.4 3.8E-13 1.3E-17 111.8 10.1 98 79-178 133-259 (286)
38 1vr9_A CBS domain protein/ACT 99.4 7.7E-13 2.6E-17 105.1 10.6 95 82-178 12-130 (213)
39 2uv4_A 5'-AMP-activated protei 99.4 4.6E-13 1.6E-17 100.2 8.6 95 80-178 20-151 (152)
40 2yvy_A MGTE, Mg2+ transporter 99.4 9.3E-13 3.2E-17 108.7 10.7 96 81-178 133-257 (278)
41 4fry_A Putative signal-transdu 99.4 6.9E-13 2.4E-17 99.4 8.8 95 83-179 7-136 (157)
42 2j9l_A Chloride channel protei 99.4 4.9E-13 1.7E-17 102.4 7.9 97 81-178 9-165 (185)
43 3ddj_A CBS domain-containing p 99.4 3.8E-13 1.3E-17 110.5 7.4 97 80-178 153-285 (296)
44 3l2b_A Probable manganase-depe 99.4 5.8E-13 2E-17 107.3 7.8 57 82-140 6-62 (245)
45 3ddj_A CBS domain-containing p 99.4 2.1E-12 7.1E-17 106.1 10.5 94 82-177 92-213 (296)
46 3kh5_A Protein MJ1225; AMPK, A 99.3 7.8E-13 2.7E-17 107.0 5.7 94 81-177 146-280 (280)
47 2d4z_A Chloride channel protei 99.3 3.1E-12 1.1E-16 105.0 8.9 58 80-139 10-69 (250)
48 3t4n_C Nuclear protein SNF4; C 99.3 4.2E-12 1.4E-16 105.5 9.2 96 81-178 185-320 (323)
49 3kh5_A Protein MJ1225; AMPK, A 99.3 6.5E-12 2.2E-16 101.6 9.4 94 82-178 83-205 (280)
50 2zy9_A Mg2+ transporter MGTE; 99.3 7.6E-12 2.6E-16 111.0 9.9 98 79-178 151-277 (473)
51 3pc3_A CG1753, isoform A; CBS, 99.3 3.9E-12 1.3E-16 114.0 7.5 95 81-179 382-512 (527)
52 2yzq_A Putative uncharacterize 99.3 3E-12 1E-16 104.0 4.9 93 83-177 1-118 (282)
53 2yzq_A Putative uncharacterize 99.2 2.2E-11 7.6E-16 98.8 9.4 116 51-173 33-179 (282)
54 2v8q_E 5'-AMP-activated protei 99.2 3E-11 1E-15 100.7 8.8 97 81-177 33-176 (330)
55 2qrd_G Protein C1556.08C; AMPK 99.2 5.6E-11 1.9E-15 99.1 10.3 95 82-178 181-315 (334)
56 3org_A CMCLC; transporter, tra 99.2 5.7E-12 1.9E-16 115.4 1.6 97 81-178 451-625 (632)
57 4fxs_A Inosine-5'-monophosphat 99.1 3.4E-11 1.2E-15 107.5 5.8 91 84-176 90-207 (496)
58 3usb_A Inosine-5'-monophosphat 99.1 9.1E-11 3.1E-15 105.1 8.5 93 84-178 114-234 (511)
59 2v8q_E 5'-AMP-activated protei 99.1 1.5E-10 5.2E-15 96.4 8.9 94 83-178 190-323 (330)
60 2qrd_G Protein C1556.08C; AMPK 99.1 3.1E-10 1.1E-14 94.5 8.9 97 81-177 20-171 (334)
61 3lfr_A Putative metal ION tran 99.0 3.5E-10 1.2E-14 83.1 6.9 89 51-142 37-126 (136)
62 1zfj_A Inosine monophosphate d 99.0 3.9E-10 1.3E-14 100.0 8.1 92 84-177 91-210 (491)
63 3t4n_C Nuclear protein SNF4; C 99.0 2.8E-10 9.7E-15 94.4 6.8 92 85-178 116-248 (323)
64 3gby_A Uncharacterized protein 99.0 1.3E-10 4.5E-15 84.1 3.1 88 51-141 37-124 (128)
65 3kxr_A Magnesium transporter, 99.0 7.8E-10 2.7E-14 87.5 6.9 73 68-142 101-173 (205)
66 3ghd_A A cystathionine beta-sy 99.0 1.7E-09 5.9E-14 71.9 7.5 48 95-143 2-49 (70)
67 4esy_A CBS domain containing m 99.0 6.1E-10 2.1E-14 84.7 5.9 60 81-143 103-162 (170)
68 3nqr_A Magnesium and cobalt ef 99.0 1.3E-09 4.4E-14 78.8 7.3 59 80-141 66-124 (127)
69 1vrd_A Inosine-5'-monophosphat 99.0 6.3E-11 2.1E-15 105.3 0.0 93 84-178 96-215 (494)
70 2rih_A Conserved protein with 99.0 6E-10 2E-14 81.8 5.3 58 81-141 69-126 (141)
71 3kpb_A Uncharacterized protein 99.0 5.2E-10 1.8E-14 79.8 4.8 58 83-142 62-119 (122)
72 2ef7_A Hypothetical protein ST 99.0 4.4E-10 1.5E-14 81.5 4.1 60 81-142 65-124 (133)
73 4avf_A Inosine-5'-monophosphat 98.9 8.2E-11 2.8E-15 104.9 -0.0 91 83-176 88-205 (490)
74 4gqw_A CBS domain-containing p 98.9 4.2E-10 1.4E-14 82.8 3.7 61 81-143 83-143 (152)
75 3jtf_A Magnesium and cobalt ef 98.9 2.2E-09 7.4E-14 77.9 7.2 59 81-142 67-125 (129)
76 3i8n_A Uncharacterized protein 98.9 7.2E-10 2.4E-14 80.5 4.5 88 51-142 40-128 (130)
77 3lhh_A CBS domain protein; str 98.9 1E-09 3.6E-14 83.8 5.5 59 82-143 106-164 (172)
78 1vr9_A CBS domain protein/ACT 98.9 2.6E-09 9E-14 84.6 7.7 72 68-141 57-128 (213)
79 1me8_A Inosine-5'-monophosphat 98.9 1.2E-10 4.1E-15 104.1 -0.2 93 84-178 97-221 (503)
80 2p9m_A Hypothetical protein MJ 98.9 7E-10 2.4E-14 80.7 3.1 88 52-141 41-134 (138)
81 3lv9_A Putative transporter; C 98.9 3.8E-09 1.3E-13 78.1 7.1 58 82-142 87-144 (148)
82 2uv4_A 5'-AMP-activated protei 98.9 1.8E-09 6E-14 80.4 5.1 89 51-141 53-149 (152)
83 1y5h_A Hypothetical protein RV 98.9 2E-09 6.9E-14 77.9 5.0 89 51-142 40-130 (133)
84 3oco_A Hemolysin-like protein 98.8 5E-09 1.7E-13 78.2 6.8 59 82-143 85-143 (153)
85 3fhm_A Uncharacterized protein 98.8 1.2E-09 4E-14 82.6 3.2 61 80-143 90-150 (165)
86 3oi8_A Uncharacterized protein 98.8 2.8E-09 9.7E-14 80.0 5.3 55 81-138 101-155 (156)
87 3k2v_A Putative D-arabinose 5- 98.8 2E-09 7E-14 79.8 4.4 86 51-139 62-148 (149)
88 3hf7_A Uncharacterized CBS-dom 98.8 3.8E-09 1.3E-13 76.9 5.7 58 82-142 69-126 (130)
89 3sl7_A CBS domain-containing p 98.8 2.8E-09 9.5E-14 80.8 5.2 60 81-142 96-155 (180)
90 3fv6_A YQZB protein; CBS domai 98.8 2.1E-09 7.3E-14 80.7 4.2 92 51-142 48-143 (159)
91 1pvm_A Conserved hypothetical 98.8 3.2E-09 1.1E-13 81.6 5.3 62 80-143 72-133 (184)
92 2yzi_A Hypothetical protein PH 98.8 3.3E-09 1.1E-13 77.2 5.1 89 51-142 39-128 (138)
93 4af0_A Inosine-5'-monophosphat 98.8 4.3E-10 1.5E-14 100.7 0.1 87 88-176 143-256 (556)
94 3fio_A A cystathionine beta-sy 98.8 1.5E-08 5.2E-13 65.7 7.5 48 95-143 2-49 (70)
95 1pbj_A Hypothetical protein; s 98.8 7.2E-09 2.5E-13 73.9 6.4 59 81-142 63-121 (125)
96 2rc3_A CBS domain; in SITU pro 98.8 7E-09 2.4E-13 75.3 6.4 60 80-142 71-130 (135)
97 3l2b_A Probable manganase-depe 98.8 2.7E-09 9.3E-14 85.6 4.5 59 81-141 183-242 (245)
98 3k6e_A CBS domain protein; str 98.8 3.4E-09 1.2E-13 80.2 4.7 57 81-141 84-140 (156)
99 2emq_A Hypothetical conserved 98.8 3.4E-09 1.2E-13 78.8 4.2 59 81-143 81-139 (157)
100 2o16_A Acetoin utilization pro 98.8 2.8E-09 9.5E-14 80.2 3.6 58 81-141 76-133 (160)
101 3lqn_A CBS domain protein; csg 98.8 1E-08 3.4E-13 75.8 6.5 58 81-142 85-142 (150)
102 2yvy_A MGTE, Mg2+ transporter 98.8 6.6E-09 2.3E-13 85.4 5.4 73 68-142 184-256 (278)
103 2oux_A Magnesium transporter; 98.8 8.5E-09 2.9E-13 85.4 6.0 73 68-142 186-258 (286)
104 4fry_A Putative signal-transdu 98.7 1.2E-08 4.2E-13 76.0 5.8 60 81-143 76-135 (157)
105 1yav_A Hypothetical protein BS 98.7 3.8E-09 1.3E-13 79.1 2.6 59 80-142 83-141 (159)
106 2nyc_A Nuclear protein SNF4; b 98.7 1.7E-08 6E-13 73.5 5.7 62 81-142 75-140 (144)
107 2j9l_A Chloride channel protei 98.7 3.2E-08 1.1E-12 75.3 7.1 60 80-142 105-164 (185)
108 1o50_A CBS domain-containing p 98.7 2.4E-08 8.2E-13 74.6 5.8 60 80-142 93-152 (157)
109 1jcn_A Inosine monophosphate d 98.7 3.5E-10 1.2E-14 101.1 -5.3 93 83-177 108-232 (514)
110 3ctu_A CBS domain protein; str 98.6 2.6E-08 9E-13 74.1 4.8 57 82-142 85-141 (156)
111 2cu0_A Inosine-5'-monophosphat 98.6 4.1E-09 1.4E-13 93.6 0.1 91 84-177 94-207 (486)
112 2zy9_A Mg2+ transporter MGTE; 98.6 3.1E-08 1.1E-12 87.8 5.5 73 68-142 204-276 (473)
113 2pfi_A Chloride channel protei 98.6 6.2E-08 2.1E-12 72.1 5.6 58 82-142 83-146 (164)
114 3ocm_A Putative membrane prote 98.6 8.2E-08 2.8E-12 73.7 6.1 58 82-143 100-157 (173)
115 3org_A CMCLC; transporter, tra 98.5 5.5E-08 1.9E-12 89.0 5.1 56 84-142 569-624 (632)
116 2d4z_A Chloride channel protei 98.4 2.5E-07 8.6E-12 75.6 5.5 53 87-142 193-245 (250)
117 3usb_A Inosine-5'-monophosphat 98.3 6.7E-07 2.3E-11 80.0 7.1 75 68-143 159-234 (511)
118 4af0_A Inosine-5'-monophosphat 98.3 6.3E-08 2.1E-12 86.8 0.0 72 68-141 185-256 (556)
119 1me8_A Inosine-5'-monophosphat 98.3 7.2E-08 2.5E-12 86.1 0.0 63 80-142 158-220 (503)
120 4avf_A Inosine-5'-monophosphat 98.3 1.2E-07 4.2E-12 84.4 0.9 74 69-142 132-206 (490)
121 4fxs_A Inosine-5'-monophosphat 98.1 3.1E-07 1.1E-11 81.9 0.2 75 68-142 133-208 (496)
122 1vrd_A Inosine-5'-monophosphat 98.1 3.2E-07 1.1E-11 81.4 -0.1 62 81-142 153-214 (494)
123 3pc3_A CG1753, isoform A; CBS, 98.1 7.5E-07 2.6E-11 79.6 2.2 61 80-144 448-512 (527)
124 1zfj_A Inosine monophosphate d 98.0 6.9E-06 2.4E-10 72.6 7.0 61 81-142 150-210 (491)
125 2cu0_A Inosine-5'-monophosphat 98.0 6.2E-07 2.1E-11 79.6 0.0 60 81-142 148-207 (486)
126 1jcn_A Inosine monophosphate d 97.9 7.6E-07 2.6E-11 79.4 -2.5 62 81-142 171-232 (514)
127 3fio_A A cystathionine beta-sy 94.1 0.042 1.4E-06 34.4 3.3 29 148-177 20-48 (70)
128 3ghd_A A cystathionine beta-sy 91.8 0.17 5.9E-06 32.5 3.7 31 146-177 18-48 (70)
129 1tif_A IF3-N, translation init 58.2 14 0.00049 24.4 4.1 30 116-145 13-42 (78)
130 1svj_A Potassium-transporting 52.4 9.7 0.00033 28.2 2.9 34 104-138 121-154 (156)
131 1p0z_A Sensor kinase CITA; tra 42.4 19 0.00065 25.0 3.0 19 119-137 106-124 (131)
132 3by8_A Sensor protein DCUS; hi 40.6 20 0.00069 25.3 3.0 18 119-136 111-128 (142)
133 3tjo_A Serine protease HTRA1; 40.5 16 0.00053 28.3 2.5 21 115-135 187-207 (231)
134 2w5e_A Putative serine proteas 40.1 17 0.00057 26.9 2.5 23 112-134 122-144 (163)
135 2pny_A Isopentenyl-diphosphate 38.2 40 0.0014 26.5 4.6 22 117-138 38-59 (246)
136 3lgi_A Protease DEGS; stress-s 37.9 17 0.00057 28.2 2.3 21 114-134 173-193 (237)
137 3k6y_A Serine protease, possib 36.6 20 0.00067 27.6 2.5 22 114-135 180-201 (237)
138 4dah_A Sporulation kinase D; a 36.4 54 0.0019 24.1 5.0 43 119-165 130-176 (217)
139 2dho_A Isopentenyl-diphosphate 35.9 46 0.0016 25.9 4.6 22 117-138 27-48 (235)
140 3sti_A Protease DEGQ; serine p 35.5 21 0.00071 28.1 2.5 22 114-135 184-205 (245)
141 2as9_A Serine protease; trypsi 35.3 19 0.00066 27.1 2.2 22 114-135 155-176 (210)
142 2qkp_A Uncharacterized protein 34.7 21 0.0007 25.6 2.2 22 116-137 108-130 (151)
143 2w7s_A Serine protease SPLA; h 34.1 23 0.0008 26.2 2.5 22 114-135 151-172 (200)
144 3fan_A Non-structural protein; 34.1 21 0.00072 28.0 2.2 26 114-139 124-149 (213)
145 3lif_A Putative diguanylate cy 32.2 1.1E+02 0.0037 22.9 6.2 46 119-166 132-181 (254)
146 2vid_A Serine protease SPLB; h 31.9 27 0.00091 25.7 2.5 21 115-135 155-175 (204)
147 1qtf_A Exfoliative toxin B; se 30.4 29 0.00099 26.8 2.6 22 114-135 183-204 (246)
148 3k2t_A LMO2511 protein; lister 28.5 96 0.0033 18.9 4.2 26 100-125 11-36 (57)
149 1agj_A Epidermolytic toxin A; 26.9 35 0.0012 26.1 2.5 22 114-135 192-213 (242)
150 3num_A Serine protease HTRA1; 26.5 36 0.0012 27.7 2.6 20 115-134 170-189 (332)
151 1l1j_A Heat shock protease HTR 26.4 32 0.0011 26.8 2.2 22 114-135 180-201 (239)
152 1lcy_A HTRA2 serine protease; 25.2 40 0.0014 27.4 2.6 22 114-135 170-191 (325)
153 1h75_A Glutaredoxin-like prote 24.7 45 0.0016 20.3 2.3 35 107-141 39-73 (81)
154 3qo6_A Protease DO-like 1, chl 24.0 42 0.0014 27.6 2.5 21 114-134 177-197 (348)
155 1te0_A Protease DEGS; two doma 23.9 43 0.0015 27.0 2.6 22 114-135 162-183 (318)
156 3stj_A Protease DEGQ; serine p 22.8 45 0.0015 27.5 2.5 21 114-134 184-204 (345)
157 1r7h_A NRDH-redoxin; thioredox 22.3 51 0.0018 19.5 2.2 32 108-139 40-71 (75)
158 1y8t_A Hypothetical protein RV 22.2 47 0.0016 26.8 2.5 21 114-134 166-186 (324)
159 2o8l_A V8 protease, taphylococ 20.8 54 0.0019 25.8 2.5 22 114-135 166-187 (274)
160 2eui_A Probable acetyltransfer 20.5 1.8E+02 0.0062 18.7 5.1 23 113-135 43-67 (153)
161 4agk_A Capsid protein, coat pr 20.3 59 0.002 23.7 2.3 20 114-133 106-125 (158)
162 3t9y_A Acetyltransferase, GNAT 20.0 1.3E+02 0.0045 19.6 4.2 22 115-136 49-70 (150)
No 1
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.67 E-value=3.3e-16 Score=114.59 Aligned_cols=98 Identities=17% Similarity=0.254 Sum_probs=83.2
Q ss_pred cccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCC-CcEEEEEeHHHHHhccccCC--------------
Q 030127 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD-WKLVGLVSDYDLLALDSISG-------------- 145 (182)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~-g~lvGiVt~~Dll~~~~~~~-------------- 145 (182)
..++|+++|+++.++.++.+++++.+|++.|.+++++.+||+|++ |+++|+||.+|+++......
T Consensus 3 ~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~~v~~~m~~~~~v~ 82 (129)
T 3jtf_A 3 AERTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYMLEPALDIRSLVRPAVFIP 82 (129)
T ss_dssp -CCBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGTCTTSCGGGGCBCCCEEE
T ss_pred CCCCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhccCCcCHHHHhCCCeEeC
Confidence 467999999954378999999999999999999999999999986 89999999999987532111
Q ss_pred -----------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhh
Q 030127 146 -----------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGR 178 (182)
Q Consensus 146 -----------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~ 178 (182)
|...+...+||+|++|+++|+||+.|+++.+.+
T Consensus 83 ~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~l~g 126 (129)
T 3jtf_A 83 EVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTMEDVLEQIVG 126 (129)
T ss_dssp TTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhC
Confidence 446678899999999999999999999998865
No 2
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.67 E-value=1.8e-16 Score=120.80 Aligned_cols=94 Identities=23% Similarity=0.305 Sum_probs=80.3
Q ss_pred cccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccccC------------------
Q 030127 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS------------------ 144 (182)
Q Consensus 83 ~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~~~------------------ 144 (182)
.+++++|+|+++++++.+++++.+|++.|.+++++++||+|++|+++|+||.+|+++.....
T Consensus 15 ~~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~~~~~~~~~~~~~v~~im~~ 94 (156)
T 3k6e_A 15 GQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVHMTKT 94 (156)
T ss_dssp TTGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGGTCBC
T ss_pred ccHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhhcccccccccccCHHHhhcC
Confidence 47899999988999999999999999999999999999999889999999999997532110
Q ss_pred C----------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhh
Q 030127 145 G----------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGR 178 (182)
Q Consensus 145 ~----------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~ 178 (182)
. |.. ...+||+|++|+++|+||+.|+++++.+
T Consensus 95 ~~~~v~~~~~l~~~~~~m~~--~~~lpVVd~~g~l~GiiT~~Dil~~~~~ 142 (156)
T 3k6e_A 95 DVAVVSPDFTITEVLHKLVD--ESFLPVVDAEGIFQGIITRKSILKAVNA 142 (156)
T ss_dssp SCCCBCTTCCHHHHHHHTTT--SSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred CceecccccHHHHHHHHHHH--cCCeEEEecCCEEEEEEEHHHHHHHHHH
Confidence 0 222 3469999999999999999999999865
No 3
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.65 E-value=2.7e-16 Score=120.40 Aligned_cols=95 Identities=22% Similarity=0.252 Sum_probs=82.5
Q ss_pred cccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccccC----------------
Q 030127 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS---------------- 144 (182)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~~~---------------- 144 (182)
..++|+|+|++ +++++.+++++.+|++.|.+++++.+||+|++|+++|+||.+|+++.....
T Consensus 16 ~~~~V~diM~~--~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~~~~~~~~~~~~~~~~~~~~~ 93 (170)
T 4esy_A 16 RQVPIRDILTS--PVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRGSIPFWIYEASEILSRAIPAP 93 (170)
T ss_dssp HTSBGGGGCCS--CCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGGTCCTTHHHHHHHHTTTSCHH
T ss_pred cCCCHHHhcCC--CCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHHHhhccccchhhhhhhccchh
Confidence 56799999999 999999999999999999999999999999999999999999997542110
Q ss_pred --------------------C----------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhh
Q 030127 145 --------------------G----------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGR 178 (182)
Q Consensus 145 --------------------~----------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~ 178 (182)
. |...+...+||+| +|+++|+||+.|+++.+..
T Consensus 94 ~~~~~~~~~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd-~g~lvGivt~~Dil~~l~~ 162 (170)
T 4esy_A 94 EVEHLFETGRKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQ-DGVPVGIVTRRDLLKLLLL 162 (170)
T ss_dssp HHHHHHHHHTTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHTTTSCC
T ss_pred hHHhhhccccccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEE-CCEEEEEEEHHHHHHHHHh
Confidence 0 4467888999998 5899999999999988754
No 4
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.64 E-value=6.8e-16 Score=112.49 Aligned_cols=97 Identities=22% Similarity=0.276 Sum_probs=81.8
Q ss_pred ccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCC-CcEEEEEeHHHHHhccccCC---------------
Q 030127 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD-WKLVGLVSDYDLLALDSISG--------------- 145 (182)
Q Consensus 82 ~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~-g~lvGiVt~~Dll~~~~~~~--------------- 145 (182)
+.+|+++|++..++.++.+++++.+|++.|.+++++.+||+|++ |+++|+||.+|+++......
T Consensus 2 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~v~~~m~~~~~v 81 (127)
T 3nqr_A 2 DQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVLRTAVVV 81 (127)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGSTTCCCCCHHHHCBCCCEE
T ss_pred CcCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhccCCCCCHHHHcCCCeEE
Confidence 46899999972259999999999999999999999999999987 89999999999986542110
Q ss_pred ------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhh
Q 030127 146 ------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGR 178 (182)
Q Consensus 146 ------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~ 178 (182)
|...+...+||+|++|+++|+||+.|+++.+.+
T Consensus 82 ~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~dll~~l~g 126 (127)
T 3nqr_A 82 PESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIVG 126 (127)
T ss_dssp ETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHHHHHHC--
T ss_pred CCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhC
Confidence 446678889999999999999999999998743
No 5
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.64 E-value=1.5e-15 Score=110.64 Aligned_cols=96 Identities=18% Similarity=0.135 Sum_probs=83.7
Q ss_pred cccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccccCC---------------
Q 030127 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISG--------------- 145 (182)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~~~~--------------- 145 (182)
..++++++|.+ ++.++.+++++.+|++.|.+++++.+||+|+ |+++|+|+.+|+++......
T Consensus 3 ~s~~v~~~m~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~~~ 79 (128)
T 3gby_A 3 ASVTFSYLAET--DYPVFTLGGSTADAARRLAASGCACAPVLDG-ERYLGMVHLSRLLEGRKGWPTVKEKLGEELLETVR 79 (128)
T ss_dssp TTCBGGGGCBC--CSCCEETTSBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHTTCSSSCCTTCBCCGGGCBCCC
T ss_pred cceEHHHhhcC--CcceECCCCCHHHHHHHHHHCCCcEEEEEEC-CEEEEEEEHHHHHHHHhhCCcccCcHHHHccCCCc
Confidence 46799999999 8999999999999999999999999999998 99999999999986532110
Q ss_pred --------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhhc
Q 030127 146 --------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGRW 179 (182)
Q Consensus 146 --------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~~ 179 (182)
+...+...+||+|++|+++|++|+.|+++.+.+.
T Consensus 80 ~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~~l~~~ 127 (128)
T 3gby_A 80 SYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLAER 127 (128)
T ss_dssp CBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHHHHHTT
T ss_pred EECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHHHHHhh
Confidence 3355667799999999999999999999998764
No 6
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.64 E-value=6.4e-16 Score=113.47 Aligned_cols=97 Identities=10% Similarity=0.025 Sum_probs=82.3
Q ss_pred cccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeC-CCcEEEEEeHHHHHhccccCC----------------
Q 030127 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDD-DWKLVGLVSDYDLLALDSISG---------------- 145 (182)
Q Consensus 83 ~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~-~g~lvGiVt~~Dll~~~~~~~---------------- 145 (182)
++|+++|+++.++.++++++++.+|++.|.+++++.+||+|+ +|+++|+|+.+|+++......
T Consensus 2 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~~~~~~~v~~~m~~~~~ 81 (130)
T 3hf7_A 2 VSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKKEFTKEIMLRAADEIYF 81 (130)
T ss_dssp CBHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSSCCCHHHHHHHSBCCCE
T ss_pred cCHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccCccchhhHHHhccCCeE
Confidence 589999986447899999999999999999999999999975 589999999999986543210
Q ss_pred -------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhhc
Q 030127 146 -------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGRW 179 (182)
Q Consensus 146 -------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~~ 179 (182)
|...+...+||+|++|+++|++|..|+++.+.+.
T Consensus 82 v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~g~ 128 (130)
T 3hf7_A 82 VPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIVGD 128 (130)
T ss_dssp EETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHHHC-
T ss_pred eCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHHhCC
Confidence 3456778899999999999999999999998653
No 7
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.63 E-value=1.1e-15 Score=114.04 Aligned_cols=101 Identities=14% Similarity=0.152 Sum_probs=86.8
Q ss_pred CccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCC-CcEEEEEeHHHHHhccccC----------C--
Q 030127 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD-WKLVGLVSDYDLLALDSIS----------G-- 145 (182)
Q Consensus 79 ~~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~-g~lvGiVt~~Dll~~~~~~----------~-- 145 (182)
.+...+|+++|+++.++.++.+++++.+|++.|.+++++.+||+|++ |+++|+||.+|++...... .
T Consensus 19 ~l~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~~~~v~~~m~~~~ 98 (148)
T 3lv9_A 19 EFEEKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINENKIELEEILRDII 98 (148)
T ss_dssp GGGTCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHHHSCCCGGGTCBCCE
T ss_pred ccCCCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcCCCccHHHhcCCCe
Confidence 45678999999986679999999999999999999999999999987 8999999999998652111 0
Q ss_pred --------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhhc
Q 030127 146 --------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGRW 179 (182)
Q Consensus 146 --------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~~ 179 (182)
|...+...+||+|++|+++|+||..|+++.+.+.
T Consensus 99 ~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~~ 146 (148)
T 3lv9_A 99 YISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEIVGE 146 (148)
T ss_dssp EEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEEEHHHHHHHHHHT
T ss_pred EECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCc
Confidence 3456778899999999999999999999998653
No 8
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.63 E-value=4.1e-16 Score=114.10 Aligned_cols=99 Identities=15% Similarity=0.120 Sum_probs=81.9
Q ss_pred ccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCC-CcEEEEEeHHHHHhccccCC-------------
Q 030127 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD-WKLVGLVSDYDLLALDSISG------------- 145 (182)
Q Consensus 80 ~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~-g~lvGiVt~~Dll~~~~~~~------------- 145 (182)
+...+|+++|++..++.++.+++++.+|++.|.+++++.+||+|++ |+++|+||.+|+++......
T Consensus 3 l~~~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~~~~v~~~m~~~~ 82 (130)
T 3i8n_A 3 AQDVPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGSGQKQLGAVMRPIQ 82 (130)
T ss_dssp ----CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTTTTSBHHHHSEECC
T ss_pred cCcCCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCCCcCCHHHHhcCCc
Confidence 3667999999974467799999999999999999999999999987 89999999999986532110
Q ss_pred --------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhh
Q 030127 146 --------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGR 178 (182)
Q Consensus 146 --------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~ 178 (182)
|...+...+||+|++|+++|+||+.|+++.+.+
T Consensus 83 ~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~~dil~~l~g 129 (130)
T 3i8n_A 83 VVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTLEDIFEHLVG 129 (130)
T ss_dssp EEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHHHT
T ss_pred CcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEHHHHHHHHcC
Confidence 445677889999999999999999999998753
No 9
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.63 E-value=5.6e-16 Score=114.50 Aligned_cols=98 Identities=20% Similarity=0.205 Sum_probs=81.8
Q ss_pred ccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCC-CcEEEEEeHHHHHhccccCC---------------
Q 030127 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD-WKLVGLVSDYDLLALDSISG--------------- 145 (182)
Q Consensus 82 ~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~-g~lvGiVt~~Dll~~~~~~~--------------- 145 (182)
+.+|+++|+++.++.++.+++++.+|++.|.+++++.+||+|++ |+++|+||.+|+++......
T Consensus 2 ~~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~~v~~~m~~~~~ 81 (136)
T 3lfr_A 2 DLQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKADGDSDDVKKLLRPATF 81 (136)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSSSGGGCCGGGTCBCCCE
T ss_pred CCChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhccCCCcCHHHHcCCCeE
Confidence 46899999954478999999999999999999999999999987 89999999999997543100
Q ss_pred -------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhhc
Q 030127 146 -------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGRW 179 (182)
Q Consensus 146 -------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~~ 179 (182)
|...+...+||+|++|+++|+||..|+++.+.+.
T Consensus 82 v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~~~ 128 (136)
T 3lfr_A 82 VPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIEDVLEQIVGD 128 (136)
T ss_dssp EETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHTTC---
T ss_pred ECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCC
Confidence 3456778899999999999999999999987653
No 10
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.61 E-value=1.5e-15 Score=109.17 Aligned_cols=94 Identities=21% Similarity=0.334 Sum_probs=81.7
Q ss_pred cccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccccCC-----------------
Q 030127 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISG----------------- 145 (182)
Q Consensus 83 ~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~~~~----------------- 145 (182)
++|+++|.+ ++.++.+++++.+|++.|.+++++.+||+|++|+++|+|+.+|+++......
T Consensus 1 ~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~~~v~~~~~~~~~~v~~~ 78 (122)
T 3kpb_A 1 TLVKDILSK--PPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQNKKTIEEIMTRNVITAHED 78 (122)
T ss_dssp CBHHHHCCS--CCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHHHHHHTTCCBGGGTSBSSCCCEETT
T ss_pred CchHHhhCC--CCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHHHHHHhcccCHHHHhcCCCeEECCC
Confidence 378999999 8999999999999999999999999999998999999999999986532110
Q ss_pred ---------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhh
Q 030127 146 ---------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGR 178 (182)
Q Consensus 146 ---------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~ 178 (182)
+...+...+||+|++++++|+|+..|+++.+.+
T Consensus 79 ~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~l~~ 120 (122)
T 3kpb_A 79 EPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLFGG 120 (122)
T ss_dssp SBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHC-
T ss_pred CCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHHHHhhc
Confidence 335677889999999999999999999998865
No 11
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.59 E-value=3.6e-15 Score=115.36 Aligned_cols=101 Identities=14% Similarity=0.091 Sum_probs=86.0
Q ss_pred CccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCC-CcEEEEEeHHHHHhcccc---------CC---
Q 030127 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD-WKLVGLVSDYDLLALDSI---------SG--- 145 (182)
Q Consensus 79 ~~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~-g~lvGiVt~~Dll~~~~~---------~~--- 145 (182)
.+...+|+++|+++.+++++.+++++.+|++.|.+++++.+||+|++ |+++|+|+.+|++..... ..
T Consensus 32 ~l~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~~~~~~~v~~~~~~~~ 111 (173)
T 3ocm_A 32 TLAERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITEGRVRRNRLRDPII 111 (173)
T ss_dssp HHTTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHHHHSSCCGGGSBCCCE
T ss_pred ccCCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHhcCCcchhHhcCCCeE
Confidence 45678999999864478999999999999999999999999999977 899999999999864210 00
Q ss_pred -------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhhc
Q 030127 146 -------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGRW 179 (182)
Q Consensus 146 -------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~~ 179 (182)
|...+...+||+|++|+++|+||..|+++.+.+.
T Consensus 112 v~~~~~l~~al~~m~~~~~~~~~Vvde~g~lvGiIT~~Dil~~l~~~ 158 (173)
T 3ocm_A 112 VHESIGILRLMDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAGE 158 (173)
T ss_dssp ECGGGCHHHHHHHHHHSTTCCEEEECTTCCEEEEECHHHHHHHHHCC
T ss_pred ECCCCcHHHHHHHHHHcCCeEEEEEeCCCCEEEEEeHHHHHHHHhCc
Confidence 4466778899999999999999999999998753
No 12
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.59 E-value=4.9e-15 Score=113.76 Aligned_cols=101 Identities=15% Similarity=0.199 Sum_probs=83.3
Q ss_pred CccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCC-CcEEEEEeHHHHHhccccCC------------
Q 030127 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD-WKLVGLVSDYDLLALDSISG------------ 145 (182)
Q Consensus 79 ~~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~-g~lvGiVt~~Dll~~~~~~~------------ 145 (182)
.+...+|+++|+++.+++++++++++.+|++.|.+++++.+||+|++ |+++|+||.+|+++......
T Consensus 38 ~l~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~~~~v~~im~~~~ 117 (172)
T 3lhh_A 38 RLDERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESIAGERLELVDLVKNCN 117 (172)
T ss_dssp -----CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHHTTCCCCGGGGCBCCE
T ss_pred ccCCCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHhhcCcccHHHHhcCCe
Confidence 45678999999953388999999999999999999999999999987 99999999999987543110
Q ss_pred --------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhhc
Q 030127 146 --------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGRW 179 (182)
Q Consensus 146 --------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~~ 179 (182)
|...+...+||+|++|+++|+||+.|+++.+.+.
T Consensus 118 ~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dil~~l~~~ 165 (172)
T 3lhh_A 118 FVPNSLSGMELLEHFRTTGSQMVFVVDEYGDLKGLVTLQDMMDALTGE 165 (172)
T ss_dssp EEETTCCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHTT
T ss_pred EeCCCCCHHHHHHHHHHcCCeEEEEEeCCCCEEEEeeHHHHHHHHhCC
Confidence 4456778899999999999999999999998654
No 13
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.58 E-value=1.6e-14 Score=105.73 Aligned_cols=97 Identities=25% Similarity=0.347 Sum_probs=82.7
Q ss_pred cccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHH-HhccccC-------------C-
Q 030127 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL-LALDSIS-------------G- 145 (182)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dl-l~~~~~~-------------~- 145 (182)
...+++++|++ ++.++.+++++.+|++.|.+++++.+||+|++|+++|+|+.+|+ ++..... .
T Consensus 6 ~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~~ 83 (138)
T 2p9m_A 6 KNIKVKDVMTK--NVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIRDKYTLETTIGDVMTKDV 83 (138)
T ss_dssp TTCBGGGTSBC--SCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHHHHTTTCCCSSCBHHHHSCSSC
T ss_pred ccCCHHHhhcC--CceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHHHHHhhcccCCcCHHHHhCCCc
Confidence 56799999998 89999999999999999999999999999988999999999999 6532110 0
Q ss_pred ---------------CccCC-----CceeEeecCCCcEEEEEeHHHHHHHhhhc
Q 030127 146 ---------------SGRAD-----NSMFPEVDSTWKVHSTRCRSCLVKPMGRW 179 (182)
Q Consensus 146 ---------------~~~~~-----~~~~pVvd~~~k~~GiVt~~dil~~l~~~ 179 (182)
+...+ ...+||+|++++++|+++..|+++.+.+.
T Consensus 84 ~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~~ 137 (138)
T 2p9m_A 84 ITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIRTISKI 137 (138)
T ss_dssp CCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEEEEHHHHHHHHHHC
T ss_pred EEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEEEEHHHHHHHHHhh
Confidence 44556 77899999889999999999999988653
No 14
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.57 E-value=1.8e-14 Score=105.07 Aligned_cols=95 Identities=17% Similarity=0.263 Sum_probs=81.9
Q ss_pred cccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccccC-------------C--
Q 030127 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS-------------G-- 145 (182)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~~~-------------~-- 145 (182)
..++|+++|.+ ++.++.+++++.+|++.|.+++++.+||+| +|+++|+|+.+|+++..... .
T Consensus 2 ~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~~~~~~~v~~~~~~~~~ 78 (133)
T 2ef7_A 2 EEEIVKEYMKT--QVISVTKDAKLNDIAKVMTEKNIGSVIVVD-GNKPVGIITERDIVKAIGKGKSLETKAEEFMTASLI 78 (133)
T ss_dssp CCCBGGGTSBC--SCCEEETTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTTCCTTCBGGGTSEECCC
T ss_pred CcccHHHhccC--CCEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEcHHHHHHHHhcCCCcccCHHHHcCCCCE
Confidence 45689999999 899999999999999999999999999999 89999999999997642210 0
Q ss_pred --------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhh
Q 030127 146 --------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGR 178 (182)
Q Consensus 146 --------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~ 178 (182)
+...+...+||+|++|+++|+||..|+++.+.+
T Consensus 79 ~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~ 125 (133)
T 2ef7_A 79 TIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAIDD 125 (133)
T ss_dssp CEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHH
Confidence 334567789999989999999999999998865
No 15
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.57 E-value=5e-15 Score=110.31 Aligned_cols=98 Identities=21% Similarity=0.213 Sum_probs=82.0
Q ss_pred ccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhcccc-----------C----
Q 030127 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI-----------S---- 144 (182)
Q Consensus 80 ~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~~-----------~---- 144 (182)
+..++|+++|++..++.++.+++++.+|++.|.+++++.+||+|++|+++|+||.+|+++.... .
T Consensus 12 l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v~~ 91 (150)
T 3lqn_A 12 FQQIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGILGLERIEFERLEEMKVEQ 91 (150)
T ss_dssp HHHCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHTBCSSSBCGGGGGGCBGGG
T ss_pred hhcCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHHHHHHhhcccchhHHhcCCHHH
Confidence 4678999999963369999999999999999999999999999989999999999999865421 0
Q ss_pred ----C----------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhhc
Q 030127 145 ----G----------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGRW 179 (182)
Q Consensus 145 ----~----------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~~ 179 (182)
. +...+ .+||+|++|+++|+||..|+++.+.+.
T Consensus 92 ~m~~~~~~v~~~~~l~~a~~~~~~~~--~l~Vvd~~g~~~Giit~~dil~~l~~~ 144 (150)
T 3lqn_A 92 VMKQDIPVLKLEDSFAKALEMTIDHP--FICAVNEDGYFEGILTRRAILKLLNKK 144 (150)
T ss_dssp TCBSSCCEEETTCBHHHHHHHHHHCS--EEEEECTTCBEEEEEEHHHHHHHHHHH
T ss_pred HhcCCCceeCCCCCHHHHHHHHHhCC--EEEEECCCCcEEEEEEHHHHHHHHHHH
Confidence 0 22333 299999999999999999999998764
No 16
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.56 E-value=5.8e-15 Score=111.51 Aligned_cols=95 Identities=19% Similarity=0.236 Sum_probs=81.6
Q ss_pred CccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCC-CcEEEEEeHHHHHhccccC---C---------
Q 030127 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD-WKLVGLVSDYDLLALDSIS---G--------- 145 (182)
Q Consensus 79 ~~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~-g~lvGiVt~~Dll~~~~~~---~--------- 145 (182)
.+...+|+++|+++.+++++++++++.+|++.|.+++++.+||+|++ |+++|+||.+|++...... .
T Consensus 34 ~l~~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~~~~v~~im~~~~ 113 (156)
T 3oi8_A 34 DFSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFNPEQFHLKSILRPAV 113 (156)
T ss_dssp HHTTCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSSCGGGCCHHHHCBCCC
T ss_pred ccCCCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHcCCcccHHHHcCCCE
Confidence 34678999999975578999999999999999999999999999987 4999999999998763220 0
Q ss_pred --------------CccCCCceeEeecCCCcEEEEEeHHHHH
Q 030127 146 --------------SGRADNSMFPEVDSTWKVHSTRCRSCLV 173 (182)
Q Consensus 146 --------------~~~~~~~~~pVvd~~~k~~GiVt~~dil 173 (182)
|...+...+||+|++|+++|+||..|++
T Consensus 114 ~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 114 FVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDII 155 (156)
T ss_dssp EEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEHHHHC
T ss_pred EECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEHHHhc
Confidence 4467788999999999999999999986
No 17
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.56 E-value=2e-14 Score=106.36 Aligned_cols=98 Identities=64% Similarity=0.897 Sum_probs=83.7
Q ss_pred cccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccc------------------
Q 030127 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS------------------ 142 (182)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~------------------ 142 (182)
..++|+++|++..++.++.+++++.+|++.|.+++++.+||+|++|+++|+|+.+|++....
T Consensus 3 ~~~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~~~ 82 (152)
T 4gqw_A 3 GVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLALDSGDSTWKTFNAVQKLLSKT 82 (152)
T ss_dssp CCSBGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHTTCC----CCHHHHHHHTC----
T ss_pred ceEEhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHHHhhcccCcccchHHHHHHHHHh
Confidence 45799999998656899999999999999999999999999998899999999999975311
Q ss_pred -cCC------------------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhh
Q 030127 143 -ISG------------------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGR 178 (182)
Q Consensus 143 -~~~------------------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~ 178 (182)
... |...+...+||++++++++|+||..|+++.+.+
T Consensus 83 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~~~ 143 (152)
T 4gqw_A 83 NGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQ 143 (152)
T ss_dssp -CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred ccccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHHHHHHHHh
Confidence 000 445677789999999999999999999998865
No 18
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.55 E-value=3.7e-15 Score=111.96 Aligned_cols=100 Identities=19% Similarity=0.245 Sum_probs=84.0
Q ss_pred ccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEe-eC-CCcEEEEEeHHHHHhccccC----------C--
Q 030127 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVI-DD-DWKLVGLVSDYDLLALDSIS----------G-- 145 (182)
Q Consensus 80 ~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVv-D~-~g~lvGiVt~~Dll~~~~~~----------~-- 145 (182)
+...+|+++|+++.++.++.+++++.+|++.|.+++++.+||+ |+ +|+++|+||.+|+++..... .
T Consensus 17 l~~~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~~~~~v~~~m~~~~ 96 (153)
T 3oco_A 17 MNDKVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARIDDKAKISTIMRDIV 96 (153)
T ss_dssp HHHCBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHHTTSBGGGTCBCCE
T ss_pred cCCCEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcCCCCcHHHHhCCCe
Confidence 3567999999965478999999999999999999999999999 65 48999999999998642110 0
Q ss_pred --------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhhc
Q 030127 146 --------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGRW 179 (182)
Q Consensus 146 --------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~~ 179 (182)
|...+...+||+|++|+++|+||+.|+++.+.+.
T Consensus 97 ~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~~~ 144 (153)
T 3oco_A 97 SVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEELFGN 144 (153)
T ss_dssp EEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHHHC-
T ss_pred EECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHhcc
Confidence 4466778899999999999999999999998753
No 19
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.54 E-value=3.5e-14 Score=104.14 Aligned_cols=97 Identities=23% Similarity=0.266 Sum_probs=81.8
Q ss_pred ccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHh-ccccC-------------C
Q 030127 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA-LDSIS-------------G 145 (182)
Q Consensus 80 ~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~-~~~~~-------------~ 145 (182)
+...+|+++|++ ++.++.+++++.+|++.|.+++++.+||+|++|+++|+|+.+|+++ ..... .
T Consensus 4 l~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~ 81 (138)
T 2yzi_A 4 DMKAPIKVYMTK--KLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIVPGLPYDIPVERIMTRN 81 (138)
T ss_dssp CTTSBGGGTCBC--CCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCCCTTSBGGGTCBCS
T ss_pred hhhhhHHHHhcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhcCCcccCCHHHHhhCC
Confidence 456799999998 8999999999999999999999999999998899999999999973 22110 0
Q ss_pred ----------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhhc
Q 030127 146 ----------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGRW 179 (182)
Q Consensus 146 ----------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~~ 179 (182)
|...+...+ |+|++|+++|+||..|+++.+.+.
T Consensus 82 ~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~dil~~~~~~ 130 (138)
T 2yzi_A 82 LITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTLSDLLEASRRR 130 (138)
T ss_dssp CCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEEEEHHHHHHHHHCC
T ss_pred CeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEEEEHHHHHHHHHHH
Confidence 334566678 999889999999999999988653
No 20
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.54 E-value=3e-14 Score=108.59 Aligned_cols=98 Identities=52% Similarity=0.773 Sum_probs=83.5
Q ss_pred cccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhcc-------------------
Q 030127 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD------------------- 141 (182)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~------------------- 141 (182)
..++|+++|+++.++.++.+++++.+|++.|.+++++.+||+|++|+++|+|+.+|+++..
T Consensus 2 ~~~~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~ 81 (180)
T 3sl7_A 2 TGYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDST 81 (180)
T ss_dssp CCCBHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHTCC-------------------C
T ss_pred CceeHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHHhhhhhccccCCcccccccccch
Confidence 3468999999855689999999999999999999999999999999999999999998421
Q ss_pred --------------ccCC------------------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhh
Q 030127 142 --------------SISG------------------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGR 178 (182)
Q Consensus 142 --------------~~~~------------------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~ 178 (182)
.... |...+...+||+|++++++|+||+.|+++.+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~~~~ 156 (180)
T 3sl7_A 82 WKTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQ 156 (180)
T ss_dssp CCSHHHHHHHHHTTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred hhhhHHHHHHHhccccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHH
Confidence 0000 456777899999999999999999999998754
No 21
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.54 E-value=5.7e-14 Score=111.60 Aligned_cols=97 Identities=13% Similarity=0.194 Sum_probs=84.3
Q ss_pred ccccccccccccCCCeEEEcCCCCHHHHHHHHHHc---CCCEEEEeeCCCcEEEEEeHHHHHhccccCC-----------
Q 030127 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEK---RITGFPVIDDDWKLVGLVSDYDLLALDSISG----------- 145 (182)
Q Consensus 80 ~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~---~~~~lPVvD~~g~lvGiVt~~Dll~~~~~~~----------- 145 (182)
+...+|+++|++ +++++++++++.+|++.|.+. +++.+||+|++|+++|+|+.+|++.......
T Consensus 51 ~~~~~v~~iM~~--~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~~~~~~v~~im~~~~~~ 128 (205)
T 3kxr_A 51 YSENEIGRYTDH--QMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIFKHEPHEPLISLLSEDSRA 128 (205)
T ss_dssp SCTTCGGGGCBC--CCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHTTSCTTSBGGGGCCSSCCC
T ss_pred CCcchHHhhccC--ceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHHhCCCcchHHHHhcCCCeE
Confidence 456689999999 999999999999999999987 7899999999999999999999985422110
Q ss_pred -------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhh
Q 030127 146 -------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGR 178 (182)
Q Consensus 146 -------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~ 178 (182)
|...+...+||+|++|+++|+||..|+++.+..
T Consensus 129 v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i~~ 174 (205)
T 3kxr_A 129 LTANTTLLDAAEAIEHSREIELPVIDDAGELIGRVTLRAATALVRE 174 (205)
T ss_dssp EETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 456788899999999999999999999998764
No 22
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.54 E-value=2.3e-14 Score=103.04 Aligned_cols=93 Identities=15% Similarity=0.139 Sum_probs=78.5
Q ss_pred cccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccccC----C-------------
Q 030127 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS----G------------- 145 (182)
Q Consensus 83 ~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~~~----~------------- 145 (182)
++|+++|++ ++.++.+++++.+|++.|.+++++.+||+| +|+++|+|+.+|+++..... .
T Consensus 1 m~v~~~m~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~G~it~~dl~~~~~~~~~~~~~~v~~~m~~~~~~ 77 (125)
T 1pbj_A 1 MRVEDVMVT--DVDTIDITASLEDVLRNYVENAKGSSVVVK-EGVRVGIVTTWDVLEAIAEGDDLAEVKVWEVMERDLVT 77 (125)
T ss_dssp -CHHHHCBC--SCCEEETTCBHHHHHHHHHHHCCCEEEEEE-TTEEEEEEEHHHHHHHHHHTCCTTTSBHHHHCBCGGGE
T ss_pred CCHHHhcCC--CceEECCCCcHHHHHHHHHHcCCCEEEEEe-CCeeEEEEeHHHHHHHHhcCCcccccCHHHHcCCCCeE
Confidence 478999998 899999999999999999999999999999 89999999999998642110 0
Q ss_pred -------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhhc
Q 030127 146 -------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGRW 179 (182)
Q Consensus 146 -------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~~ 179 (182)
+...+...+||+|+ ++++|+++..|+++.+.+.
T Consensus 78 v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~Gvit~~dl~~~l~~~ 123 (125)
T 1pbj_A 78 ISPRATIKEAAEKMVKNVVWRLLVEED-DEIIGVISATDILRAKMAK 123 (125)
T ss_dssp ECTTSCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHHC--
T ss_pred ECCCCCHHHHHHHHHhcCCcEEEEEEC-CEEEEEEEHHHHHHHHHhc
Confidence 33556778999998 9999999999999988654
No 23
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.54 E-value=1.8e-14 Score=108.04 Aligned_cols=97 Identities=22% Similarity=0.278 Sum_probs=80.7
Q ss_pred cccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhcccc---------C-------
Q 030127 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI---------S------- 144 (182)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~~---------~------- 144 (182)
...+++++|++..++.++.+++++.+|++.|.+++++.+||+|++|+++|+||.+|+++.... .
T Consensus 13 ~~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~v~~~m 92 (156)
T 3ctu_A 13 LLGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVHMT 92 (156)
T ss_dssp HHTTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGGGC
T ss_pred HHHHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHhccccccccccCcHHHhc
Confidence 456899999964489999999999999999999999999999988999999999999854321 0
Q ss_pred --C----------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhhc
Q 030127 145 --G----------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGRW 179 (182)
Q Consensus 145 --~----------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~~ 179 (182)
. +...+ .+||+|++|+++|+||..|+++.+.+.
T Consensus 93 ~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~~dil~~l~~~ 143 (156)
T 3ctu_A 93 KTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNAL 143 (156)
T ss_dssp BCSCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEETTHHHHHHHHH
T ss_pred cCCceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEHHHHHHHHHHH
Confidence 0 22333 799999999999999999999998653
No 24
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.53 E-value=4.3e-14 Score=106.49 Aligned_cols=99 Identities=18% Similarity=0.227 Sum_probs=82.0
Q ss_pred CccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhcccc---------CC----
Q 030127 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI---------SG---- 145 (182)
Q Consensus 79 ~~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~~---------~~---- 145 (182)
.+..++|+++|++++++.++.+++++.+|++.|.+++++.+||+|++|+++|+|+.+|++..... ..
T Consensus 10 ~l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~v~ 89 (159)
T 1yav_A 10 QLLEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIFGLERIEFEKLDQITVE 89 (159)
T ss_dssp -CTTCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHBCSSSBCGGGTTTSBHH
T ss_pred HHhHhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhhhhcccchhhhccCCHH
Confidence 34567999999875568999999999999999999999999999988999999999999865321 00
Q ss_pred ----------------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhhc
Q 030127 146 ----------------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGRW 179 (182)
Q Consensus 146 ----------------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~~ 179 (182)
+...+ .+||+|++++++|+||+.|+++.+.+.
T Consensus 90 ~~m~~~~~~v~~~~~l~~a~~~m~~~~--~lpVvd~~g~~vGiit~~dil~~~~~~ 143 (159)
T 1yav_A 90 EVMLTDIPRLHINDPIMKGFGMVINNG--FVCVENDEQVFEGIFTRRVVLKELNKH 143 (159)
T ss_dssp HHSBCSCCEEETTSBHHHHHHHTTTCS--EEEEECTTCBEEEEEEHHHHHHHHHHH
T ss_pred HhcCCCCceEcCCCCHHHHHHHHHhCC--EEEEEeCCCeEEEEEEHHHHHHHHHHH
Confidence 22333 399999899999999999999988653
No 25
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.52 E-value=2e-14 Score=109.26 Aligned_cols=100 Identities=18% Similarity=0.169 Sum_probs=84.3
Q ss_pred CCccccccccccccC-CCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhcccc-------C-----
Q 030127 78 PSSGVYTVGDFMTTK-EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI-------S----- 144 (182)
Q Consensus 78 ~~~~~~~V~diM~~~-~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~~-------~----- 144 (182)
..+..++|+++|+++ .++.++.+++++.+|++.|.+++++.+||+|++|+++|+||.+|+++.... .
T Consensus 19 ~~l~~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~ 98 (165)
T 3fhm_A 19 FQGMATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQGAASLQQSVSVA 98 (165)
T ss_dssp CSSSSCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHGGGGGTSBGGGT
T ss_pred HhhhhcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHhcCCccccCCHHHH
Confidence 345678999999962 268999999999999999999999999999988999999999999764211 0
Q ss_pred ---C----------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhh
Q 030127 145 ---G----------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGR 178 (182)
Q Consensus 145 ---~----------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~ 178 (182)
. |...+...+||+|+ ++++|+|+..|+++.+.+
T Consensus 99 m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~~~Giit~~dil~~~~~ 150 (165)
T 3fhm_A 99 MTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN-GRLAGIISIGDVVKARIG 150 (165)
T ss_dssp SBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHTTC
T ss_pred hcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHH
Confidence 0 33557778999998 999999999999998865
No 26
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.52 E-value=5.4e-14 Score=106.21 Aligned_cols=97 Identities=21% Similarity=0.204 Sum_probs=82.2
Q ss_pred CccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhcccc--------------C
Q 030127 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI--------------S 144 (182)
Q Consensus 79 ~~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~~--------------~ 144 (182)
.+..++|+++|++ . +++.+++++.+|++.|.+++++.+||+|++|+++|+||.+|+++.... .
T Consensus 13 ~l~~~~v~~im~~--~-~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~ 89 (159)
T 3fv6_A 13 KLKKLQVKDFQSI--P-VVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRASIGQQELTSVPVHIIMTR 89 (159)
T ss_dssp HHTTCBGGGSCBC--C-CEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHTSCSCTTTCBGGGTSEE
T ss_pred HHhhCCHHHHcCC--C-EEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHhhccCcccCcCHHHHHcC
Confidence 3467799999987 4 599999999999999999999999999988999999999999874311 0
Q ss_pred --C----------------CccCCCceeEeecCCC---cEEEEEeHHHHHHHhhh
Q 030127 145 --G----------------SGRADNSMFPEVDSTW---KVHSTRCRSCLVKPMGR 178 (182)
Q Consensus 145 --~----------------~~~~~~~~~pVvd~~~---k~~GiVt~~dil~~l~~ 178 (182)
. |...+...+||+|+++ +++|+||..|+++.+.+
T Consensus 90 ~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil~~l~~ 144 (159)
T 3fv6_A 90 MPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILVS 144 (159)
T ss_dssp TTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHHHHHHH
T ss_pred CCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHHHHHHH
Confidence 1 3345677899999888 99999999999998865
No 27
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.51 E-value=6.5e-14 Score=106.00 Aligned_cols=95 Identities=25% Similarity=0.263 Sum_probs=81.6
Q ss_pred cccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhcccc------------CC---
Q 030127 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI------------SG--- 145 (182)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~~------------~~--- 145 (182)
..++|+++|++ ++.++.+++++.+|++.|.+++++.+||+|++|+++|+|+.+|+++.... ..
T Consensus 3 ~~~~v~dim~~--~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~~v 80 (160)
T 2o16_A 3 LMIKVEDMMTR--HPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQESSLQRSAQGDSLAFETPL 80 (160)
T ss_dssp CCCBGGGTSEE--SCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHCC---------CCCBH
T ss_pred CcCcHHHHhcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHHhhcccccccchhcccCH
Confidence 35689999999 89999999999999999999999999999988999999999999864210 00
Q ss_pred -----------------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhh
Q 030127 146 -----------------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGR 178 (182)
Q Consensus 146 -----------------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~ 178 (182)
|...+...+||+|+ ++++|+||..|+++.+.+
T Consensus 81 ~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~lvGiit~~dil~~~~~ 135 (160)
T 2o16_A 81 FEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAK-DVLVGIITDSDFVTIAIN 135 (160)
T ss_dssp HHHSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEET-TEEEEEECHHHHHHHHHH
T ss_pred HHHhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEEC-CEEEEEEEHHHHHHHHHH
Confidence 33556778999998 999999999999998754
No 28
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.50 E-value=6.8e-14 Score=103.23 Aligned_cols=94 Identities=15% Similarity=0.085 Sum_probs=79.1
Q ss_pred ccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCC--cEEEEEeHHHHHhccccC-------------C-
Q 030127 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDW--KLVGLVSDYDLLALDSIS-------------G- 145 (182)
Q Consensus 82 ~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g--~lvGiVt~~Dll~~~~~~-------------~- 145 (182)
.++|+++|++ ++.++.+++++.+|++.|.+++++.+||+|++| +++|+|+.+|+++..... .
T Consensus 4 ~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~~ 81 (141)
T 2rih_A 4 AIRTSELLKR--PPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQRLDLDGPAMPIANSPI 81 (141)
T ss_dssp -CBGGGGCCS--CCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHHHHTTCCTTSBSGGGCBCCC
T ss_pred ceEHHHHhcC--CCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHHHhcCCCCCCCHHHHcCCCC
Confidence 3589999998 899999999999999999999999999999888 999999999998642110 0
Q ss_pred --------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhh
Q 030127 146 --------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMG 177 (182)
Q Consensus 146 --------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~ 177 (182)
|...+...+||+|++++++|+||..|+++.+.
T Consensus 82 ~~v~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~ 127 (141)
T 2rih_A 82 TVLDTDPVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDLCFERA 127 (141)
T ss_dssp EEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHSCHH
T ss_pred eEEcCCCHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHHHHHHH
Confidence 22345668999998999999999999987654
No 29
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.50 E-value=3.4e-14 Score=103.56 Aligned_cols=95 Identities=17% Similarity=0.257 Sum_probs=79.3
Q ss_pred cccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHh-ccccC-----C---------
Q 030127 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA-LDSIS-----G--------- 145 (182)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~-~~~~~-----~--------- 145 (182)
..++|+++|.+ ++.++.+++++.+|++.|.+++++.+||+|++|+++|+|+.+|++. ..... .
T Consensus 6 ~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~ 83 (133)
T 1y5h_A 6 TMTTARDIMNA--GVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAGLDPNTATAGELARDS 83 (133)
T ss_dssp --CCHHHHSEE--TCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHHTTGGGTCCTTTSBHHHHHTTC
T ss_pred hhcCHHHHhcC--CceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHHHHHhcCCCccccCHHHHhcCC
Confidence 34689999998 8999999999999999999999999999998899999999999983 32110 0
Q ss_pred ----------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhh
Q 030127 146 ----------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGR 178 (182)
Q Consensus 146 ----------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~ 178 (182)
|...+...+||+|+ ++++|++|..|+++.+.+
T Consensus 84 ~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-g~~~Giit~~dil~~l~~ 131 (133)
T 1y5h_A 84 IYYVDANASIQEMLNVMEEHQVRRVPVISE-HRLVGIVTEADIARHLPE 131 (133)
T ss_dssp CCCEETTCCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHTCC-
T ss_pred CEEECCCCCHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHh
Confidence 33556778999998 899999999999998754
No 30
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.50 E-value=6.1e-14 Score=104.95 Aligned_cols=98 Identities=19% Similarity=0.183 Sum_probs=80.5
Q ss_pred ccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhcccc----------CC----
Q 030127 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI----------SG---- 145 (182)
Q Consensus 80 ~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~~----------~~---- 145 (182)
+..++|+++|.++.++.++.+++++.+|++.|.+++++.+||+|++|+++|+|+.+|+++.... ..
T Consensus 8 l~~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v~~ 87 (157)
T 2emq_A 8 FMQMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDAILGLERIEFERLETMKVEE 87 (157)
T ss_dssp --CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHHHHSBCSSSBCGGGGGTCBGGG
T ss_pred HhhCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHHHHHhcccccchHHhcCCcHHH
Confidence 4667999999854468999999999999999999999999999988999999999999865321 00
Q ss_pred ---------------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhhc
Q 030127 146 ---------------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGRW 179 (182)
Q Consensus 146 ---------------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~~ 179 (182)
|...+. +||+|++++++|+||..|+++.+.+.
T Consensus 88 ~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~~dil~~~~~~ 140 (157)
T 2emq_A 88 VMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTRREVLKQLNKQ 140 (157)
T ss_dssp TCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEHHHHHHHHHHT
T ss_pred HhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEHHHHHHHHHHH
Confidence 222332 89999889999999999999988653
No 31
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.50 E-value=4.2e-14 Score=105.58 Aligned_cols=92 Identities=21% Similarity=0.235 Sum_probs=78.6
Q ss_pred ccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccccCC----------------
Q 030127 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISG---------------- 145 (182)
Q Consensus 82 ~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~~~~---------------- 145 (182)
.++|+++|++..++.++.+++++.+|++.|.+++++.+||+|++|+++|+||.+|+++......
T Consensus 27 ~~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~~~ 106 (149)
T 3k2v_A 27 LLRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLRRVFDTGVDMRDASIADVMTRGGI 106 (149)
T ss_dssp TSBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHHHHHCSSSCCTTCBHHHHSEESCC
T ss_pred ccCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHHHHHhcCCCcccCcHHHHcCCCCe
Confidence 3589999987556899999999999999999999999999998899999999999986532110
Q ss_pred --------------CccCCCceeEeecCCCcEEEEEeHHHHHH
Q 030127 146 --------------SGRADNSMFPEVDSTWKVHSTRCRSCLVK 174 (182)
Q Consensus 146 --------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~ 174 (182)
|...+...+||+|++ +++|+|+..|+++
T Consensus 107 ~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-~~~Giit~~dil~ 148 (149)
T 3k2v_A 107 RIRPGTLAVDALNLMQSRHITCVLVADGD-HLLGVVHMHDLLR 148 (149)
T ss_dssp EECTTCBHHHHHHHHHHHTCSEEEEEETT-EEEEEEEHHHHTC
T ss_pred EECCCCCHHHHHHHHHHcCCCEEEEecCC-EEEEEEEHHHhhc
Confidence 335577789999976 9999999999875
No 32
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.50 E-value=7.9e-14 Score=101.99 Aligned_cols=91 Identities=22% Similarity=0.247 Sum_probs=78.1
Q ss_pred ccccccc---cCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHh-cccc------C--------C
Q 030127 84 TVGDFMT---TKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA-LDSI------S--------G 145 (182)
Q Consensus 84 ~V~diM~---~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~-~~~~------~--------~ 145 (182)
+|+++|+ + ++.++.+++++.+|++.|.+++++.+||+| +|+++|+|+.+|+++ .... . .
T Consensus 7 ~v~~im~~~~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~ 83 (135)
T 2rc3_A 7 TVKHLLQEKGH--TVVAIGPDDSVFNAMQKMAADNIGALLVMK-DEKLVGILTERDFSRKSYLLDKPVKDTQVKEIMTRQ 83 (135)
T ss_dssp BHHHHHHHHCC--CCCEECTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHGGGSSSCGGGSBGGGTSBCS
T ss_pred eHHHHHhcCCC--CcEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEehHHHHHHHHHcCCCcccCCHHHhccCC
Confidence 8999999 6 899999999999999999999999999999 899999999999985 2110 0 0
Q ss_pred ----------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhh
Q 030127 146 ----------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGR 178 (182)
Q Consensus 146 ----------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~ 178 (182)
+...+...+||+| +++++|+||..|+++.+.+
T Consensus 84 ~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dll~~~~~ 131 (135)
T 2rc3_A 84 VAYVDLNNTNEDCMALITEMRVRHLPVLD-DGKVIGLLSIGDLVKDAIS 131 (135)
T ss_dssp CCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHC
T ss_pred CeEECCCCcHHHHHHHHHHhCCCEEEEEe-CCEEEEEEEHHHHHHHHHh
Confidence 3345667899999 7999999999999998765
No 33
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.49 E-value=7.1e-14 Score=108.09 Aligned_cols=94 Identities=23% Similarity=0.231 Sum_probs=81.6
Q ss_pred cccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhcccc------C---------C--
Q 030127 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI------S---------G-- 145 (182)
Q Consensus 83 ~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~~------~---------~-- 145 (182)
++|+++|++ +++++.+++++.+|++.|.+++++.+||+|++|+++|+|+.+|++..... . .
T Consensus 9 ~~v~~im~~--~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~~~~~~~~~~~v~~im~~~~~ 86 (184)
T 1pvm_A 9 MRVEKIMNS--NFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFIPRNKKPDEVPIRLVMRKPIP 86 (184)
T ss_dssp CBGGGTSBT--TCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTGGGCCCGGGSBGGGTSBSSCC
T ss_pred cCHHHhcCC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhcccCcccCCHHHHhCCCCc
Confidence 689999998 89999999999999999999999999999988999999999999864321 0 0
Q ss_pred --------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhh
Q 030127 146 --------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGR 178 (182)
Q Consensus 146 --------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~ 178 (182)
|...+...+||+|++++++|+||..|+++.+.+
T Consensus 87 ~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~ 133 (184)
T 1pvm_A 87 KVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYLSR 133 (184)
T ss_dssp EEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHTTTSCH
T ss_pred EECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHh
Confidence 335577889999988999999999999987654
No 34
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.48 E-value=2.2e-13 Score=102.47 Aligned_cols=100 Identities=19% Similarity=0.234 Sum_probs=84.6
Q ss_pred CCccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCE-EEEeeCCCcEEEEEeHHHHHhccc--------------
Q 030127 78 PSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITG-FPVIDDDWKLVGLVSDYDLLALDS-------------- 142 (182)
Q Consensus 78 ~~~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~-lPVvD~~g~lvGiVt~~Dll~~~~-------------- 142 (182)
......+|+++|++ ++.++.+++++.+|++.|.+++++. +||+|++ +++|+||.+|+++...
T Consensus 11 ~~~~~~~v~~im~~--~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~-~~vGivt~~dl~~~~~~~~~~~~~~~~~~~ 87 (157)
T 1o50_A 11 HHMKVKDVCKLISL--KPTVVEEDTPIEEIVDRILEDPVTRTVYVARDN-KLVGMIPVMHLLKVSGFHFFGFIPKEELIR 87 (157)
T ss_dssp TTCBHHHHTTSSCC--CCEEECTTCBHHHHHHHHHHSTTCCEEEEEETT-EEEEEEEHHHHHHHHHHHHHCCCC------
T ss_pred hhhccccHhhcccC--CCceECCCCCHHHHHHHHHhCCCCccEEEEECC-EEEEEEEHHHHHHHHhhhHHhhhccHHHHH
Confidence 34467799999999 9999999999999999999999999 9999977 9999999999986421
Q ss_pred -----cCC-------------------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhhcc
Q 030127 143 -----ISG-------------------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGRWW 180 (182)
Q Consensus 143 -----~~~-------------------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~~~ 180 (182)
... |...+...+||+|++++++|+|++.|+++.+.+..
T Consensus 88 ~~~~~~~~~~v~~im~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dll~~l~~~~ 155 (157)
T 1o50_A 88 SSMKRLIAKNASEIMLDPVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLALWKGR 155 (157)
T ss_dssp -CCCCCSSCBHHHHCBCCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHSC
T ss_pred HHHHHHcCCcHHHHcCCCeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHHHHHHHHHhh
Confidence 000 33456678999998899999999999999987643
No 35
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.45 E-value=4.6e-13 Score=98.30 Aligned_cols=96 Identities=23% Similarity=0.307 Sum_probs=80.2
Q ss_pred ccccccc---ccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhcccc--------------
Q 030127 81 GVYTVGD---FMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI-------------- 143 (182)
Q Consensus 81 ~~~~V~d---iM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~~-------------- 143 (182)
...++++ +|.+ ++.++.+++++.+|++.|.+++++.+||+|++|+++|+|+.+|+++....
T Consensus 6 ~~~~v~~~~~~~~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m 83 (144)
T 2nyc_A 6 LKIPIGDLNIITQD--NMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGIYNDLSLSVGEAL 83 (144)
T ss_dssp GGSBGGGSSCCBCS--SCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHTC----CCSBHHHHH
T ss_pred hhcchhhcCCCCCC--CceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHHHHhcccccccCCccHHHHH
Confidence 3446777 8887 89999999999999999999999999999988999999999999753210
Q ss_pred -C------C----------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhh
Q 030127 144 -S------G----------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGR 178 (182)
Q Consensus 144 -~------~----------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~ 178 (182)
. . |...+...+||+|++++++|+||..|+++.+.+
T Consensus 84 ~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~ 141 (144)
T 2nyc_A 84 MRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYILL 141 (144)
T ss_dssp HHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred hcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHHh
Confidence 0 1 234466789999988999999999999998754
No 36
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.44 E-value=3.5e-13 Score=101.14 Aligned_cols=96 Identities=15% Similarity=0.202 Sum_probs=81.7
Q ss_pred ccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeC--CCcEEEEEeHHHHHhcccc--------------
Q 030127 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDD--DWKLVGLVSDYDLLALDSI-------------- 143 (182)
Q Consensus 80 ~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~--~g~lvGiVt~~Dll~~~~~-------------- 143 (182)
...++|+++|++ ++.++.+++++.+|++.|.+++++.+||+|+ +|+++|+||.+|++.....
T Consensus 10 ~~~~~v~dim~~--~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~v~ 87 (164)
T 2pfi_A 10 SHHVRVEHFMNH--SITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSRAPGHQQCLQ 87 (164)
T ss_dssp CCSCBHHHHCBC--CCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC-------CCCCBHH
T ss_pred ccCCCHHHHcCC--CCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccccCCcccchhh
Confidence 356799999999 8999999999999999999999999999996 7999999999999754310
Q ss_pred -----C------C---------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhh
Q 030127 144 -----S------G---------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGR 178 (182)
Q Consensus 144 -----~------~---------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~ 178 (182)
. . |...+...+||+| +++++|+||+.|+++.+.+
T Consensus 88 ~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~l~Giit~~dil~~~~~ 147 (164)
T 2pfi_A 88 DILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS-RGRAVGCVSWVEMKKAISN 147 (164)
T ss_dssp HHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHHHH
T ss_pred hhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEHHHHHHHHHh
Confidence 0 0 3355677899999 7999999999999998765
No 37
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.44 E-value=3.8e-13 Score=111.76 Aligned_cols=98 Identities=23% Similarity=0.198 Sum_probs=84.4
Q ss_pred CccccccccccccCCCeEEEcCCCCHHHHHHHHHHc-----CCCEEEEeeCCCcEEEEEeHHHHHhccccCC--------
Q 030127 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEK-----RITGFPVIDDDWKLVGLVSDYDLLALDSISG-------- 145 (182)
Q Consensus 79 ~~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~-----~~~~lPVvD~~g~lvGiVt~~Dll~~~~~~~-------- 145 (182)
.....+|+++|++ +++++.+++++.+|++.|.++ +++.+||+|++|+++|+||.+|++.......
T Consensus 133 ~~~~~~v~~iM~~--~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll~~~~~~~v~~im~~~ 210 (286)
T 2oux_A 133 HYEDETAGAIMTT--EFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIVNDDDTLIADILNER 210 (286)
T ss_dssp TSCTTBHHHHCBS--CCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHTTSCTTSBHHHHSBSC
T ss_pred cCChHHHHHhCCC--CceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHHcCCCCCcHHHHcCCC
Confidence 4466799999999 999999999999999999988 7889999998899999999999986422110
Q ss_pred ----------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhh
Q 030127 146 ----------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGR 178 (182)
Q Consensus 146 ----------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~ 178 (182)
|...+...+||+|++|+++|+||..|+++.+..
T Consensus 211 ~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~~i~~ 259 (286)
T 2oux_A 211 VISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVIDD 259 (286)
T ss_dssp CCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred CeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 446677889999999999999999999998764
No 38
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.43 E-value=7.7e-13 Score=105.13 Aligned_cols=95 Identities=21% Similarity=0.255 Sum_probs=81.6
Q ss_pred ccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccccC--------C--------
Q 030127 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS--------G-------- 145 (182)
Q Consensus 82 ~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~~~--------~-------- 145 (182)
..+++++|.+ ++.++.+++++.+|++.|.+++++.+||+|++|+++|+||.+|+....... .
T Consensus 12 ~~~~~~~~~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~~~~~~~~v~~im~~~~~~v~~~~ 89 (213)
T 1vr9_A 12 HMKVKKWVTQ--DFPMVEESATVRECLHRMRQYQTNECIVKDREGHFRGVVNKEDLLDLDLDSSVFNKVSLPDFFVHEED 89 (213)
T ss_dssp -CBGGGGCBS--CSCEEETTCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGTTSCTTSBSGGGCBCTTCCEETTS
T ss_pred ccCHHHhhcC--CCeEECCCCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHHhhcCCCcHHHHccCCCEEECCCC
Confidence 3588999999 999999999999999999999999999999889999999999997532210 0
Q ss_pred --------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhh
Q 030127 146 --------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGR 178 (182)
Q Consensus 146 --------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~ 178 (182)
|...+...+||+|++++++|+||..|+++.+..
T Consensus 90 ~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~~ 130 (213)
T 1vr9_A 90 NITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIE 130 (213)
T ss_dssp BHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred cHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHHH
Confidence 345677889999988999999999999998754
No 39
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.42 E-value=4.6e-13 Score=100.21 Aligned_cols=95 Identities=24% Similarity=0.374 Sum_probs=79.2
Q ss_pred ccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccccC---------------
Q 030127 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS--------------- 144 (182)
Q Consensus 80 ~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~~~--------------- 144 (182)
...++|+++ + ++.++.+++++.+|++.|.+++++.+||+|++|+++|+|+.+|+++.....
T Consensus 20 l~~~~v~~~--~--~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~~~~~~~~~~~~~~~v~~~m~~ 95 (152)
T 2uv4_A 20 LEELQIGTY--A--NIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVSVTKALQH 95 (152)
T ss_dssp HHHHTCSBC--S--SCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHHHHHHCSSCCCTTSBGGGGGGT
T ss_pred HHHccCCcc--C--CceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHHHHhcchhhhhhcchHHHHHhh
Confidence 356688888 5 789999999999999999999999999999889999999999997642110
Q ss_pred ------C----------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhh
Q 030127 145 ------G----------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGR 178 (182)
Q Consensus 145 ------~----------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~ 178 (182)
. |...+...+||+|++|+++|+||..|+++.+..
T Consensus 96 ~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~l~~ 151 (152)
T 2uv4_A 96 RSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQALVL 151 (152)
T ss_dssp CCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHC-
T ss_pred hhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHHHHHHHHHh
Confidence 0 224466789999988999999999999998754
No 40
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.41 E-value=9.3e-13 Score=108.65 Aligned_cols=96 Identities=24% Similarity=0.275 Sum_probs=81.7
Q ss_pred cccccccccccCCCeEEEcCCCCHHHHHHHHHHc-----CCCEEEEeeCCCcEEEEEeHHHHHhccccC--------C--
Q 030127 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEK-----RITGFPVIDDDWKLVGLVSDYDLLALDSIS--------G-- 145 (182)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~-----~~~~lPVvD~~g~lvGiVt~~Dll~~~~~~--------~-- 145 (182)
...+++++|++ +++++.+++++.+|++.|.++ +++.+||+|++|+++|+||.+|++...... .
T Consensus 133 ~~~~v~~iM~~--~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~~~~~~v~~im~~~~~ 210 (278)
T 2yvy_A 133 EEDEAGGLMTP--EYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVADPRTRVAEIMNPKVV 210 (278)
T ss_dssp CTTBGGGTCBS--CCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHHHSCTTCBSTTTSBSSCC
T ss_pred CcchHHhhcCC--CceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHhcCCCCCcHHHHhCCCCe
Confidence 45689999999 999999999999999999987 789999999889999999999998542110 0
Q ss_pred --------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhh
Q 030127 146 --------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGR 178 (182)
Q Consensus 146 --------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~ 178 (182)
|...+...+||+|++|+++|+||..|+++.+.+
T Consensus 211 ~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~~Dil~~i~~ 257 (278)
T 2yvy_A 211 YVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEA 257 (278)
T ss_dssp CEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHC--
T ss_pred EEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEHHHHHHHHHH
Confidence 445677889999999999999999999998765
No 41
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.41 E-value=6.9e-13 Score=99.45 Aligned_cols=95 Identities=21% Similarity=0.225 Sum_probs=79.3
Q ss_pred cccccccccC----CCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccccC-----C--------
Q 030127 83 YTVGDFMTTK----EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS-----G-------- 145 (182)
Q Consensus 83 ~~V~diM~~~----~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~~~-----~-------- 145 (182)
.+|+++|+++ .++.++.+++++.+|++.|.+++++.+||+| +|+++|+|+.+|+++..... .
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~ 85 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVD-GDDIAGIVTERDYARKVVLQERSSKATRVEEIMT 85 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEES-SSSEEEEEEHHHHHHHSGGGTCCSSSCBHHHHSB
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEee-CCEEEEEEEHHHHHHHHHhccCCccccCHHHHcC
Confidence 4799999963 2569999999999999999999999999955 89999999999998643210 0
Q ss_pred ------------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhhc
Q 030127 146 ------------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGRW 179 (182)
Q Consensus 146 ------------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~~ 179 (182)
+...+...+||+| +++++|+|+..|+++.+.+.
T Consensus 86 ~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dil~~l~~~ 136 (157)
T 4fry_A 86 AKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIAD 136 (157)
T ss_dssp SSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTT
T ss_pred CCCcEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHHH
Confidence 3355777899999 79999999999999998653
No 42
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.41 E-value=4.9e-13 Score=102.40 Aligned_cols=97 Identities=20% Similarity=0.247 Sum_probs=80.8
Q ss_pred cccccccccccCCC--eEEE--cCCCCHHHHHHHHHHcCCCEEEEe--eCCCcEEEEEeHHHHHhcccc-----------
Q 030127 81 GVYTVGDFMTTKEE--LHVV--KPTTTVDEALEILVEKRITGFPVI--DDDWKLVGLVSDYDLLALDSI----------- 143 (182)
Q Consensus 81 ~~~~V~diM~~~~~--~~~v--~~~~tl~ea~~~m~~~~~~~lPVv--D~~g~lvGiVt~~Dll~~~~~----------- 143 (182)
...+|+++|++..+ +.++ .+++++.+|++.|.+++++.+||+ |++|+++|+|+.+|++.....
T Consensus 9 ~~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~~~~~ 88 (185)
T 2j9l_A 9 HKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVVST 88 (185)
T ss_dssp CCCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSCCCTT
T ss_pred ccCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCCcccc
Confidence 56799999998211 7888 999999999999999999999999 778999999999999864210
Q ss_pred -----------------CC--------------------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhh
Q 030127 144 -----------------SG--------------------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGR 178 (182)
Q Consensus 144 -----------------~~--------------------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~ 178 (182)
.. |...+...+||++ +|+++|+||+.|+++.+.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~g~~vGiit~~dll~~l~~ 165 (185)
T 2j9l_A 89 SIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH-NGRLLGIITKKDVLKHIAQ 165 (185)
T ss_dssp CEEECSSSCCCCCTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHH
T ss_pred ceeecccCCcccccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE-CCEEEEEEEHHHHHHHHHH
Confidence 00 3355677899998 8999999999999998865
No 43
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.40 E-value=3.8e-13 Score=110.53 Aligned_cols=97 Identities=18% Similarity=0.290 Sum_probs=84.2
Q ss_pred ccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccc-----------cC----
Q 030127 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS-----------IS---- 144 (182)
Q Consensus 80 ~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~-----------~~---- 144 (182)
....+++++|.+ ++.++.+++++.++++.|.+++++.+||+|++|+++|+||.+|+++... ..
T Consensus 153 ~~~~~v~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~v~ 230 (296)
T 3ddj_A 153 DEIFPVKVFMST--KVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQLAKAVDKLDPDYFYGKVVK 230 (296)
T ss_dssp CCCCBHHHHSBC--SCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHHHHTCTHHHHTCBHH
T ss_pred cccccHHHhhcC--CCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHHhhcChhhhcCcCHH
Confidence 345689999998 8999999999999999999999999999999999999999999986532 00
Q ss_pred -----C----------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhh
Q 030127 145 -----G----------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGR 178 (182)
Q Consensus 145 -----~----------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~ 178 (182)
. |...+...+||+|++++++|+||+.|+++.+.+
T Consensus 231 ~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~Dil~~l~~ 285 (296)
T 3ddj_A 231 DVMVTNLVTIDELASVNRAAAEMIVKRIGSLLILNKDNTIRGIITERDLLIALHH 285 (296)
T ss_dssp HHSBCCCCBCCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHH
T ss_pred HHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEcHHHHHHHHHH
Confidence 0 345677789999999999999999999999865
No 44
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.39 E-value=5.8e-13 Score=107.27 Aligned_cols=57 Identities=23% Similarity=0.419 Sum_probs=53.6
Q ss_pred ccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhc
Q 030127 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140 (182)
Q Consensus 82 ~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~ 140 (182)
..+|+|+|++ ++.++.+++++.+|++.|.+++++.+||+|++|+++|+||..|+++.
T Consensus 6 ~~~v~~im~~--~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~l~Giit~~di~~~ 62 (245)
T 3l2b_A 6 KLKVEDLEMD--KIAPLAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTSNITAT 62 (245)
T ss_dssp CCBGGGSCCB--CCCCBCTTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHH
T ss_pred cCcHHHhcCC--CCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHH
Confidence 4589999998 89999999999999999999999999999988999999999999754
No 45
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.38 E-value=2.1e-12 Score=106.10 Aligned_cols=94 Identities=24% Similarity=0.268 Sum_probs=82.3
Q ss_pred ccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccccCC----------------
Q 030127 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISG---------------- 145 (182)
Q Consensus 82 ~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~~~~---------------- 145 (182)
..+++++|++ ++.++.+++++.+|++.|.+++++.+||+|++|+++|++|.+|++.......
T Consensus 92 ~~~v~~im~~--~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~lvGivt~~dl~~~~~~~~~~~~v~~~m~~~~~~v 169 (296)
T 3ddj_A 92 TTPIIDYMTP--NPVTVYNTSDEFTAINIMVTRNFGSLPVVDINDKPVGIVTEREFLLLYKDLDEIFPVKVFMSTKVQTI 169 (296)
T ss_dssp TSBGGGTSEE--SCCCEETTSCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHGGGGGGSCCCCBHHHHSBCSCCCE
T ss_pred cccHHHhccC--CCEEEcCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHhhhcccccccHHHhhcCCCeEE
Confidence 5689999999 8999999999999999999999999999998999999999999987433110
Q ss_pred ------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhh
Q 030127 146 ------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMG 177 (182)
Q Consensus 146 ------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~ 177 (182)
+...+...+||+|++++++|++|..|+++.+.
T Consensus 170 ~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~ 213 (296)
T 3ddj_A 170 YKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQLA 213 (296)
T ss_dssp ETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHH
Confidence 33556778999999999999999999998875
No 46
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.34 E-value=7.8e-13 Score=107.02 Aligned_cols=94 Identities=18% Similarity=0.347 Sum_probs=80.6
Q ss_pred cccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhcccc-----------------
Q 030127 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI----------------- 143 (182)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~~----------------- 143 (182)
...+++++|++ ++.++.+++++.++++.|.+++++.+||+ ++|+++|+||.+|+++....
T Consensus 146 ~~~~v~~~m~~--~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv-~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~ 222 (280)
T 3kh5_A 146 ENEVIDDYITR--DVIVATPGERLKDVARTMVRNGFRRLPVV-SEGRLVGIITSTDFIKLLGSDWAFNHMQTGNVREITN 222 (280)
T ss_dssp TTCBSGGGCBC--SCCCBCTTCBHHHHHHHHHHHTCSEEEEE-ETTEEEEEEEHHHHHHHHTSHHHHHHHHSCCTHHHHH
T ss_pred CCCCHHHHhCC--CCeEECCCCcHHHHHHHHHHcCCCEEEEE-ECCEEEEEEEHHHHHHHHhhhhhhhhhcccchhhhhC
Confidence 34589999998 89999999999999999999999999999 58999999999999865421
Q ss_pred C--------C----------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhh
Q 030127 144 S--------G----------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMG 177 (182)
Q Consensus 144 ~--------~----------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~ 177 (182)
. . |...+...+||+|++|+++|+||..|+++.++
T Consensus 223 ~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Givt~~dil~~la 280 (280)
T 3kh5_A 223 VRMEEIMKRDVITAKEGDKLKKIAEIMVTNDIGALPVVDENLRIKGIITEKDVLKYFA 280 (280)
T ss_dssp CBHHHHSBSSCCCBCTTCBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHGGGGC
T ss_pred CcHHHHhcCCCEEECCCCCHHHHHHHHHHCCCCEEEEECCCCeEEEEEeHHHHHHhhC
Confidence 0 0 34567788999999999999999999998763
No 47
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.34 E-value=3.1e-12 Score=105.02 Aligned_cols=58 Identities=22% Similarity=0.405 Sum_probs=53.5
Q ss_pred ccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCC--CcEEEEEeHHHHHh
Q 030127 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD--WKLVGLVSDYDLLA 139 (182)
Q Consensus 80 ~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~--g~lvGiVt~~Dll~ 139 (182)
...++|+|+|++ +++++.+++++.+|+++|.+++++.+||||++ ++++|+|+.+||+.
T Consensus 10 ~~~~~v~diMt~--~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~ 69 (250)
T 2d4z_A 10 KYNIQVGDIMVR--DVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEG 69 (250)
T ss_dssp CSSCBTTSSSBS--SCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHH
T ss_pred cCCCChHHhcCC--CCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHH
Confidence 356799999999 99999999999999999999999999999864 68999999999974
No 48
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.32 E-value=4.2e-12 Score=105.48 Aligned_cols=96 Identities=23% Similarity=0.311 Sum_probs=82.5
Q ss_pred cccccccc---cccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhcccc--------------
Q 030127 81 GVYTVGDF---MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI-------------- 143 (182)
Q Consensus 81 ~~~~V~di---M~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~~-------------- 143 (182)
...+++++ |.+ ++.++.+++++.+|++.|.+++++.+||+|++|+++|+||.+|+++....
T Consensus 185 ~~~~v~~~~~~m~~--~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~v~~~m 262 (323)
T 3t4n_C 185 LKIPIGDLNIITQD--NMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGIYNDLSLSVGEAL 262 (323)
T ss_dssp CCSBGGGTTCSBCT--TCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETTHHHHHHHTTHHHHTTSBHHHHG
T ss_pred hhCcHHHcCCCCCC--CcEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHhhchhhhccCCHHHHH
Confidence 44589999 888 89999999999999999999999999999989999999999999753211
Q ss_pred -C------C----------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhh
Q 030127 144 -S------G----------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGR 178 (182)
Q Consensus 144 -~------~----------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~ 178 (182)
. . |...+...+||+|++++++|+||..|+++.+..
T Consensus 263 ~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~~~l~Giit~~Dil~~l~~ 320 (323)
T 3t4n_C 263 MRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYILL 320 (323)
T ss_dssp GGSCTTCCCCEEECTTCBHHHHHHHHHHSCCCEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred hhccccCCCCEEECCCCCHHHHHHHHHHhCCCEEEEECCCCcEEEEEEHHHHHHHHHh
Confidence 0 1 345677889999999999999999999998754
No 49
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.31 E-value=6.5e-12 Score=101.57 Aligned_cols=94 Identities=21% Similarity=0.347 Sum_probs=80.5
Q ss_pred ccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccccC-------------C---
Q 030127 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS-------------G--- 145 (182)
Q Consensus 82 ~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~~~-------------~--- 145 (182)
..+++++|++ ++.++.+++++.++++.|.+++++.+||+|++|+++|++|.+|+++..... .
T Consensus 83 ~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~~~~ 160 (280)
T 3kh5_A 83 NEPVREIMEE--NVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVIRALLDKIDENEVIDDYITRDVIV 160 (280)
T ss_dssp TSBGGGTSBC--SCCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHGGGSCTTCBSGGGCBCSCCC
T ss_pred hhhHHHhcCC--CCEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEEEHHHHHHHHhhcCCCCCCHHHHhCCCCeE
Confidence 4589999998 899999999999999999999999999999999999999999998642210 0
Q ss_pred -------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhh
Q 030127 146 -------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGR 178 (182)
Q Consensus 146 -------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~ 178 (182)
+...+...+||+ ++++++|+++..|+++.+.+
T Consensus 161 v~~~~~l~~~~~~~~~~~~~~~~Vv-~~~~~~Givt~~dl~~~~~~ 205 (280)
T 3kh5_A 161 ATPGERLKDVARTMVRNGFRRLPVV-SEGRLVGIITSTDFIKLLGS 205 (280)
T ss_dssp BCTTCBHHHHHHHHHHHTCSEEEEE-ETTEEEEEEEHHHHHHHHTS
T ss_pred ECCCCcHHHHHHHHHHcCCCEEEEE-ECCEEEEEEEHHHHHHHHhh
Confidence 334566789999 67999999999999998753
No 50
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.30 E-value=7.6e-12 Score=111.03 Aligned_cols=98 Identities=23% Similarity=0.263 Sum_probs=83.2
Q ss_pred CccccccccccccCCCeEEEcCCCCHHHHHHHHHHc-----CCCEEEEeeCCCcEEEEEeHHHHHhccccCC--------
Q 030127 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEK-----RITGFPVIDDDWKLVGLVSDYDLLALDSISG-------- 145 (182)
Q Consensus 79 ~~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~-----~~~~lPVvD~~g~lvGiVt~~Dll~~~~~~~-------- 145 (182)
.....+++++|++ +++++++++++.++++.|+++ +++.+||+|++++++|+|+.+|++.......
T Consensus 151 ~~~~~~v~~iM~~--~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll~~~~~~~v~dim~~~ 228 (473)
T 2zy9_A 151 RYEEDEAGGLMTP--EYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVADPRTRVAEIMNPK 228 (473)
T ss_dssp TSCTTBSTTTCBS--CEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEEEHHHHHHSCTTSBGGGTSBSS
T ss_pred cCCCCCHHHhCCC--CceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEEEHHHHhcCCCCCcHHHHhCCC
Confidence 3456789999999 999999999999999999986 4789999998899999999999985422110
Q ss_pred ----------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhh
Q 030127 146 ----------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGR 178 (182)
Q Consensus 146 ----------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~ 178 (182)
|.+++...+||+|++|+++|+||.+|+++.+..
T Consensus 229 ~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvGiIT~~Dil~~i~~ 277 (473)
T 2zy9_A 229 VVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEA 277 (473)
T ss_dssp CCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred CeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEEEEehHhhHHHHHH
Confidence 446677899999999999999999999988754
No 51
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.29 E-value=3.9e-12 Score=114.01 Aligned_cols=95 Identities=15% Similarity=0.195 Sum_probs=79.9
Q ss_pred cccccccccccCCCeEEEcCC-CCHHHHHHHHHHcCCCEEEEee-CCCcEEEEEeHHHHHhccccC--------------
Q 030127 81 GVYTVGDFMTTKEELHVVKPT-TTVDEALEILVEKRITGFPVID-DDWKLVGLVSDYDLLALDSIS-------------- 144 (182)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~-~tl~ea~~~m~~~~~~~lPVvD-~~g~lvGiVt~~Dll~~~~~~-------------- 144 (182)
...+|+++|++ +++++.++ +++.+|+++|.+++++.+||+| ++|+++|+||.+||++.....
T Consensus 382 ~~~~V~diM~~--~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~~~~~~V~~im~~ 459 (527)
T 3pc3_A 382 WSLAIAELELP--APPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQQSDPAIKALNK 459 (527)
T ss_dssp TTSBGGGGCCC--CCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCCCTTSBGGGGEET
T ss_pred cCCcHHHhCcC--CCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccCcCCCcHHHHhcC
Confidence 46799999998 89999999 9999999999999999999999 789999999999998542210
Q ss_pred C----------------CccCCCceeEeecCC----CcEEEEEeHHHHHHHhhhc
Q 030127 145 G----------------SGRADNSMFPEVDST----WKVHSTRCRSCLVKPMGRW 179 (182)
Q Consensus 145 ~----------------~~~~~~~~~pVvd~~----~k~~GiVt~~dil~~l~~~ 179 (182)
. | ......||+|++ ++++|+||+.|+++.+.+.
T Consensus 460 ~~~~v~~~~~l~~a~~~m--~~~~~~pVVd~~~~~~g~lvGIVT~~Dll~~l~~~ 512 (527)
T 3pc3_A 460 RVIRLNESEILGKLARVL--EVDPSVLILGKNPAGKVELKALATKLDVTTFIAAG 512 (527)
T ss_dssp TCCEEETTSBHHHHHHHH--TTCSEEEEEEECSSSCEEEEEEEEHHHHHHHHHTC
T ss_pred CCeEECCCCcHHHHHHHH--hhCCEEEEEeCCcccCCeEEEEEEHHHHHHHHHhc
Confidence 0 2 233357999984 8999999999999998764
No 52
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.26 E-value=3e-12 Score=104.01 Aligned_cols=93 Identities=23% Similarity=0.234 Sum_probs=65.4
Q ss_pred cccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccccCC-----------------
Q 030127 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISG----------------- 145 (182)
Q Consensus 83 ~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~~~~----------------- 145 (182)
++|+++|++ ++.++.+++++.+|++.|.+++++.+||+|++|+++|+++.+|++.......
T Consensus 1 m~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~pV~d~~~~~~Giv~~~dl~~~~~~~~v~~~m~~~~~~v~~~~~ 78 (282)
T 2yzq_A 1 MRVKTIMTQ--NPVTITLPATRNYALELFKKYKVRSFPVVNKEGKLVGIISVKRILVNPDEEQLAMLVKRDVPVVKENDT 78 (282)
T ss_dssp CBHHHHSEE--SCCCEESSCC------------CCEEEEECTTCCEEEEEESSCC----------CCCBSCCCEEETTSB
T ss_pred CchHHhccC--CCeEECCCCcHHHHHHHHHHcCCCeEEEEcCCCcEEEEEEHHHHHhhhccCCHHHHcCCCCcEECCCCc
Confidence 478999998 8999999999999999999999999999998899999999999875432110
Q ss_pred -------CccCCCceeEeecCCCcEEEEEeHHHHHH-Hhh
Q 030127 146 -------SGRADNSMFPEVDSTWKVHSTRCRSCLVK-PMG 177 (182)
Q Consensus 146 -------~~~~~~~~~pVvd~~~k~~GiVt~~dil~-~l~ 177 (182)
+...+...+||+|++++++|++|..|+++ .+.
T Consensus 79 l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~di~~~~~~ 118 (282)
T 2yzq_A 79 LKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRRYFA 118 (282)
T ss_dssp HHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTT
T ss_pred HHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHh
Confidence 33556778999998899999999999998 664
No 53
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.25 E-value=2.2e-11 Score=98.80 Aligned_cols=116 Identities=18% Similarity=0.174 Sum_probs=83.8
Q ss_pred ccchhhhhhhcccCcccCcceeccccCCCccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEE
Q 030127 51 TSSDRVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVG 130 (182)
Q Consensus 51 r~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvG 130 (182)
+.+++++..++. .|.+...++.......+++++|.+ ++.++.+++++.++++.|.+++++.+||+|++|+++|
T Consensus 33 ~~~pV~d~~~~~-----~Giv~~~dl~~~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~G 105 (282)
T 2yzq_A 33 RSFPVVNKEGKL-----VGIISVKRILVNPDEEQLAMLVKR--DVPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVG 105 (282)
T ss_dssp CEEEEECTTCCE-----EEEEESSCC----------CCCBS--CCCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEE
T ss_pred CeEEEEcCCCcE-----EEEEEHHHHHhhhccCCHHHHcCC--CCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEE
Confidence 345555543322 344455555444456789999998 8999999999999999999999999999998899999
Q ss_pred EEeHHHHHh-ccccC---------C---------------------CccCCCceeEeecCCCcEEEEEeHHHHH
Q 030127 131 LVSDYDLLA-LDSIS---------G---------------------SGRADNSMFPEVDSTWKVHSTRCRSCLV 173 (182)
Q Consensus 131 iVt~~Dll~-~~~~~---------~---------------------~~~~~~~~~pVvd~~~k~~GiVt~~dil 173 (182)
+||.+|+++ ..... . +...+...+||+|++++++|+++..|++
T Consensus 106 iit~~di~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Giit~~dl~ 179 (282)
T 2yzq_A 106 ILTVGDIIRRYFAKSEKYKGVEIEPYYQRYVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDETDLL 179 (282)
T ss_dssp EEEHHHHHHHTTTTCSGGGGCBSTTTSBSCCCCEETTSBHHHHHHHHHTCSSSEEEEECTTSCEEEEEEGGGGG
T ss_pred EEEHHHHHHHHHhccCCcccCcHHHHhCCCCEEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHh
Confidence 999999987 43311 0 2244566799999889999999999998
No 54
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.22 E-value=3e-11 Score=100.69 Aligned_cols=97 Identities=18% Similarity=0.206 Sum_probs=80.5
Q ss_pred cccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCC-CcEEEEEeHHHHHhccc-----------------
Q 030127 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD-WKLVGLVSDYDLLALDS----------------- 142 (182)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~-g~lvGiVt~~Dll~~~~----------------- 142 (182)
...+|+|+|+++.+++++.+++++.+|++.|.+++++++||+|++ ++++|+|+.+|++....
T Consensus 33 ~~~~v~dim~p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll~~l~~~~~~~~~~~~~l~~~~ 112 (330)
T 2v8q_E 33 KSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRYYKSALVQIYELEEHK 112 (330)
T ss_dssp HHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHHHHHHHHHHHHTTTCCCGGGCB
T ss_pred HcCcHhhhccCCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHHHHHHHHHhccccchhHHhhcc
Confidence 557999999544489999999999999999999999999999987 79999999999875321
Q ss_pred ------------cCC----------------CccCCCceeEeecC-CCcEEEEEeHHHHHHHhh
Q 030127 143 ------------ISG----------------SGRADNSMFPEVDS-TWKVHSTRCRSCLVKPMG 177 (182)
Q Consensus 143 ------------~~~----------------~~~~~~~~~pVvd~-~~k~~GiVt~~dil~~l~ 177 (182)
... +...+...+||+|+ +++++|++|..|+++.+.
T Consensus 113 ~~~~~~~~~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~Givt~~dl~~~~~ 176 (330)
T 2v8q_E 113 IETWREVYLQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYILTHKRILKFLK 176 (330)
T ss_dssp HHHHHHHHSSSSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEECTTTCCEEEEECHHHHHHHHH
T ss_pred HHHHHHHHhhcccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEeCCCCcEEEEEcHHHHHHHHH
Confidence 001 23446677999998 899999999999998764
No 55
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.21 E-value=5.6e-11 Score=99.05 Aligned_cols=95 Identities=16% Similarity=0.190 Sum_probs=81.1
Q ss_pred cccccc---ccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhcccc---------------
Q 030127 82 VYTVGD---FMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI--------------- 143 (182)
Q Consensus 82 ~~~V~d---iM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~~--------------- 143 (182)
..++++ +|.+ ++.++.+++++.++++.|.+++++.+||+|++|+++|+||.+|+++....
T Consensus 181 ~~~v~~l~~~m~~--~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~v~~~m~ 258 (334)
T 2qrd_G 181 RVPLNQMTIGTWS--NLATASMETKVYDVIKMLAEKNISAVPIVNSEGTLLNVYESVDVMHLIQDGDYSNLDLSVGEALL 258 (334)
T ss_dssp CCBGGGSSCSBCS--SCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETHHHHHHHTTSCGGGGGSBHHHHHT
T ss_pred hCcHHHhCCcccC--CceEECCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEHHHHHHHhhccccccccCcHHHHHh
Confidence 467888 4888 89999999999999999999999999999988999999999999863211
Q ss_pred C------C----------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhh
Q 030127 144 S------G----------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGR 178 (182)
Q Consensus 144 ~------~----------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~ 178 (182)
. . |...+...+||+|++|+++|+||..|+++.+..
T Consensus 259 ~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~l~Giit~~dil~~~~~ 315 (334)
T 2qrd_G 259 KRPANFDGVHTCRATDRLDGIFDAIKHSRVHRLFVVDENLKLEGILSLADILNYIIY 315 (334)
T ss_dssp TCCTTCCCCCEECTTCBHHHHHHHHHHSCCCEEEEECTTCBEEEEEEHHHHHHHHHS
T ss_pred cccccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHHh
Confidence 0 1 335577789999989999999999999998865
No 56
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.15 E-value=5.7e-12 Score=115.38 Aligned_cols=97 Identities=19% Similarity=0.049 Sum_probs=82.1
Q ss_pred cccccccccccCCCeEEEcCCCCHHHHHHHHH-HcCCCEEEEeeCCCcEEEEEeHHHHHhccccC---------------
Q 030127 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILV-EKRITGFPVIDDDWKLVGLVSDYDLLALDSIS--------------- 144 (182)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~-~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~~~--------------- 144 (182)
.+++|+|+|+++.++.+++++++++|+.+.|. +++++.+||+|++|+++|+|+.+|+++.....
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~~ 530 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAISRKEIVDRLQHVLEDVPEPIAGHRTLV 530 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEESHHHHTTTTTTC---------------
T ss_pred ccCcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEEEHHHHHHHHHHHhhhccccccccccee
Confidence 67899999994448999999999999999999 79999999999889999999999998653211
Q ss_pred -----------------------------------------C---------------------CccCCCceeEeecCCCc
Q 030127 145 -----------------------------------------G---------------------SGRADNSMFPEVDSTWK 162 (182)
Q Consensus 145 -----------------------------------------~---------------------~~~~~~~~~pVvd~~~k 162 (182)
. |.+++...+||+ ++|+
T Consensus 531 ~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVv-e~G~ 609 (632)
T 3org_A 531 LLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVT-ERGK 609 (632)
T ss_dssp ----------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEE-ETTE
T ss_pred ccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEE-ECCE
Confidence 0 224456789999 7899
Q ss_pred EEEEEeHHHHHHHhhh
Q 030127 163 VHSTRCRSCLVKPMGR 178 (182)
Q Consensus 163 ~~GiVt~~dil~~l~~ 178 (182)
++|+||++|+++.+.+
T Consensus 610 lvGIVT~~Dll~~~~~ 625 (632)
T 3org_A 610 LVGIVEREDVAYGYSN 625 (632)
T ss_dssp EEEEEEGGGTEECCCC
T ss_pred EEEEEehhhHHHHHhh
Confidence 9999999999888765
No 57
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.14 E-value=3.4e-11 Score=107.52 Aligned_cols=91 Identities=18% Similarity=0.274 Sum_probs=70.2
Q ss_pred ccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccc-----------c---------
Q 030127 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS-----------I--------- 143 (182)
Q Consensus 84 ~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~-----------~--------- 143 (182)
+++++|+. +++++.+++++.+++++|.+++++.+||+|++++++|+||.+|++.... .
T Consensus 90 ~~~~~m~~--d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~~~~~~~~~v~diM~p~~~~vtv~~~ 167 (496)
T 4fxs_A 90 IFEAGVVT--HPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVRFVTDLTKSVAAVMTPKERLATVKEG 167 (496)
T ss_dssp HCCC--CB--CCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHTTCCCTTSBGGGTSEEGGGCCEEECC
T ss_pred cccccccc--CceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHhhcccCCCcHHHHhcCCCCCEEECCC
Confidence 56778998 9999999999999999999999999999998899999999999973110 0
Q ss_pred -------CCCccCCCceeEeecCCCcEEEEEeHHHHHHHh
Q 030127 144 -------SGSGRADNSMFPEVDSTWKVHSTRCRSCLVKPM 176 (182)
Q Consensus 144 -------~~~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l 176 (182)
..+.+++...+||+|+++++.|+||.+|+++..
T Consensus 168 ~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 168 ATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKAE 207 (496)
T ss_dssp ----CGGGTCC---CCCEEEECTTSBCCEEECCC-----C
T ss_pred CCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHHhh
Confidence 114566778899999999999999999999864
No 58
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.14 E-value=9.1e-11 Score=105.14 Aligned_cols=93 Identities=19% Similarity=0.282 Sum_probs=77.5
Q ss_pred ccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeC--CCcEEEEEeHHHHHhccccC----------C------
Q 030127 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDD--DWKLVGLVSDYDLLALDSIS----------G------ 145 (182)
Q Consensus 84 ~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~--~g~lvGiVt~~Dll~~~~~~----------~------ 145 (182)
+.+++|.+ +++++.+++++.+++++|.+++++.+||+|+ +++++|+||.+|++...... .
T Consensus 114 ~~~~~m~~--d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~~~~~~~~V~~vM~~~~~vtv~~ 191 (511)
T 3usb_A 114 RSESGVIS--DPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRFIQDYSIKISDVMTKEQLITAPV 191 (511)
T ss_dssp TSSSCSSS--SCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTTCCCSSSBHHHHCCCCCCCCEET
T ss_pred cccccccc--CCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhhhccCCCcHHHhcccCCCEEECC
Confidence 44556666 8999999999999999999999999999998 89999999999997421100 0
Q ss_pred ----------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhh
Q 030127 146 ----------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGR 178 (182)
Q Consensus 146 ----------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~ 178 (182)
+.+.+...+||+|+++++.|+||.+|+++.+..
T Consensus 192 ~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~ 234 (511)
T 3usb_A 192 GTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEF 234 (511)
T ss_dssp TCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhc
Confidence 334567789999999999999999999998754
No 59
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.13 E-value=1.5e-10 Score=96.38 Aligned_cols=94 Identities=24% Similarity=0.354 Sum_probs=78.3
Q ss_pred cccccc--cc-cCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccccC---------------
Q 030127 83 YTVGDF--MT-TKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS--------------- 144 (182)
Q Consensus 83 ~~V~di--M~-~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~~~--------------- 144 (182)
.+++++ |. + ++.++.+++++.++++.|.+++++.+||+|++|+++|+||.+|+++.....
T Consensus 190 ~~v~~~~v~~~~--~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~l~Giit~~dl~~~~~~~~~~~~~~~v~~~~~~ 267 (330)
T 2v8q_E 190 KSLEELQIGTYA--NIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVSVTKALQH 267 (330)
T ss_dssp SBHHHHTCSBCS--SCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEGGGTGGGGGSSCCCCCSSBHHHHGGG
T ss_pred CCHHHhcccCcC--CceEECCCCCHHHHHHHHHHcCCCeEEEECCCCcEEEEEEHHHHHHHHhccccccccCcHHHHHhc
Confidence 345555 54 5 789999999999999999999999999999889999999999998654311
Q ss_pred ------C----------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhh
Q 030127 145 ------G----------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGR 178 (182)
Q Consensus 145 ------~----------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~ 178 (182)
. |...+...+||+|++|+++|+||..|+++.+..
T Consensus 268 ~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~l~Giit~~Dil~~~~~ 323 (330)
T 2v8q_E 268 RSHYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVDEHDVVKGIVSLSDILQALVL 323 (330)
T ss_dssp CCSCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHS
T ss_pred cccccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEcCCCcEEEEEeHHHHHHHHHh
Confidence 0 234567789999999999999999999998865
No 60
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.08 E-value=3.1e-10 Score=94.52 Aligned_cols=97 Identities=21% Similarity=0.218 Sum_probs=80.0
Q ss_pred cccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCC-CcEEEEEeHHHHHhccc-----------------
Q 030127 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD-WKLVGLVSDYDLLALDS----------------- 142 (182)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~-g~lvGiVt~~Dll~~~~----------------- 142 (182)
...+|.|+|+++.+++++.+++++.+|++.|.+++++.+||+|++ ++++|+|+.+|++....
T Consensus 20 ~~~~v~dim~~~~~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~~~~~~~~~~~~~~~~~~~~ 99 (334)
T 2qrd_G 20 RSRTSYDVLPTSFRLIVFDVTLFVKTSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNVIKYYYQSSSFPEAIAEIDK 99 (334)
T ss_dssp HHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHHHHHHHHHHHCSCGGGGGGGGS
T ss_pred hcCchhhhCCCCCCEEEEcCCCCHHHHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHHHHHHhhccCCccHHHHHhh
Confidence 457999999886568899999999999999999999999999976 89999999999875320
Q ss_pred --------------cCC------------------CccCCCceeEeecCCCc-----EEEEEeHHHHHHHhh
Q 030127 143 --------------ISG------------------SGRADNSMFPEVDSTWK-----VHSTRCRSCLVKPMG 177 (182)
Q Consensus 143 --------------~~~------------------~~~~~~~~~pVvd~~~k-----~~GiVt~~dil~~l~ 177 (182)
... +...+...+||+++++. ++|++|..|+++.+.
T Consensus 100 ~~~~~i~~~l~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Givt~~dl~~~~~ 171 (334)
T 2qrd_G 100 FRLLGLREVERKIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSVLTQYRILKFIS 171 (334)
T ss_dssp CBHHHHHHHHHHHTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETTTTEEEEEEEEEHHHHHHHHH
T ss_pred hchhhHHHHHHhhccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCCcCccceEEEeeHHHHHHHHH
Confidence 000 23456778999987654 999999999998764
No 61
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.05 E-value=3.5e-10 Score=83.06 Aligned_cols=89 Identities=15% Similarity=0.067 Sum_probs=64.8
Q ss_pred ccchhhhhh-hcccCcccCcceeccccCCCccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEE
Q 030127 51 TSSDRVSAL-RRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLV 129 (182)
Q Consensus 51 r~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lv 129 (182)
.++++++.. ++..|.+....+............+++++|.+ +.++.+++++.+|++.|.++++..+||+|++|+++
T Consensus 37 ~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~~v~~~m~~---~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lv 113 (136)
T 3lfr_A 37 SRYPVIGESHDDVLGVLLAKDLLPLILKADGDSDDVKKLLRP---ATFVPESKRLNVLLREFRANHNHMAIVIDEYGGVA 113 (136)
T ss_dssp SEEEEESSSTTCEEEEEEGGGGGGGGGSSSGGGCCGGGTCBC---CCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEE
T ss_pred CEEEEEcCCCCcEEEEEEHHHHHHHHHhccCCCcCHHHHcCC---CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEE
Confidence 345555543 33333333333322211123456789999965 78999999999999999999999999999899999
Q ss_pred EEEeHHHHHhccc
Q 030127 130 GLVSDYDLLALDS 142 (182)
Q Consensus 130 GiVt~~Dll~~~~ 142 (182)
|+||.+|+++...
T Consensus 114 Giit~~Dil~~l~ 126 (136)
T 3lfr_A 114 GLVTIEDVLEQIV 126 (136)
T ss_dssp EEEEHHHHHTTC-
T ss_pred EEEEHHHHHHHHh
Confidence 9999999998754
No 62
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.04 E-value=3.9e-10 Score=99.97 Aligned_cols=92 Identities=20% Similarity=0.297 Sum_probs=79.2
Q ss_pred ccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEee--CCCcEEEEEeHHHHHhcccc-----------------C
Q 030127 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVID--DDWKLVGLVSDYDLLALDSI-----------------S 144 (182)
Q Consensus 84 ~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD--~~g~lvGiVt~~Dll~~~~~-----------------~ 144 (182)
.++++|++ ++.++.+++++.++++.|.+++++.+||+| ++++++|+|+.+|++..... .
T Consensus 91 ~~~~im~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~~~~~~~~v~~im~~~~~~~v~~ 168 (491)
T 1zfj_A 91 RSENGVII--DPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFISDYNAPISEHMTSEHLVTAAV 168 (491)
T ss_dssp HHTTTTSS--SCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHHCSCSSSBTTTSCCCSCCCCEET
T ss_pred hHHhcCcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhhhccCCCcHHHHcCCCCCEEECC
Confidence 56889999 999999999999999999999999999999 78999999999999852100 0
Q ss_pred ---------CCccCCCceeEeecCCCcEEEEEeHHHHHHHhh
Q 030127 145 ---------GSGRADNSMFPEVDSTWKVHSTRCRSCLVKPMG 177 (182)
Q Consensus 145 ---------~~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~ 177 (182)
.+...+...+||+|++++++|++|.+|+++.+.
T Consensus 169 ~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~ 210 (491)
T 1zfj_A 169 GTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIE 210 (491)
T ss_dssp TCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHh
Confidence 033556678999999999999999999999876
No 63
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.04 E-value=2.8e-10 Score=94.36 Aligned_cols=92 Identities=16% Similarity=0.205 Sum_probs=73.0
Q ss_pred cccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCc-----EEEEEeHHHHHhccc---------------c-
Q 030127 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWK-----LVGLVSDYDLLALDS---------------I- 143 (182)
Q Consensus 85 V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~-----lvGiVt~~Dll~~~~---------------~- 143 (182)
+.++|.+ +++++.+++++.+|++.|.+++++.+||+|++++ ++|+||.+|+++... .
T Consensus 116 ~~~~~~~--~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~l~Givt~~di~~~l~~~~~~~~~~~~~v~~~~ 193 (323)
T 3t4n_C 116 ALGVDQL--DTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVVSVLTQYRILKFVALNCRETHFLKIPIGDLN 193 (323)
T ss_dssp HTTC------CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTCCEEEEEEEEHHHHHHHHHHHCGGGGGCCSBGGGTT
T ss_pred HhCCCCC--CceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCCccceEEEecHHHHHHHHHhcCCchhhhhCcHHHcC
Confidence 4445677 8999999999999999999999999999998775 999999999974321 0
Q ss_pred ----CC----------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhhh
Q 030127 144 ----SG----------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGR 178 (182)
Q Consensus 144 ----~~----------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~ 178 (182)
.. |...+...+||+|++++++|+||..|+++.+..
T Consensus 194 ~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~ 248 (323)
T 3t4n_C 194 IITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKG 248 (323)
T ss_dssp CSBCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETTHHHHHHHT
T ss_pred CCCCCCcEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHhh
Confidence 00 334567789999999999999999999987754
No 64
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.01 E-value=1.3e-10 Score=84.10 Aligned_cols=88 Identities=14% Similarity=0.181 Sum_probs=65.1
Q ss_pred ccchhhhhhhcccCcccCcceeccccCCCccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEE
Q 030127 51 TSSDRVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVG 130 (182)
Q Consensus 51 r~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvG 130 (182)
+++++++. ++..|.+....+............+++++|.+ ++.++.+++++.++++.|.++++..+||+|++|+++|
T Consensus 37 ~~~~Vvd~-~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~G 113 (128)
T 3gby_A 37 ACAPVLDG-ERYLGMVHLSRLLEGRKGWPTVKEKLGEELLE--TVRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEG 113 (128)
T ss_dssp SEEEEEET-TEEEEEEEHHHHHTTCSSSCCTTCBCCGGGCB--CCCCBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEE
T ss_pred cEEEEEEC-CEEEEEEEHHHHHHHHhhCCcccCcHHHHccC--CCcEECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEE
Confidence 45556655 44444433333222111112222679999998 8999999999999999999999999999998999999
Q ss_pred EEeHHHHHhcc
Q 030127 131 LVSDYDLLALD 141 (182)
Q Consensus 131 iVt~~Dll~~~ 141 (182)
+||.+|+++..
T Consensus 114 iit~~dll~~l 124 (128)
T 3gby_A 114 VVSRKRILGFL 124 (128)
T ss_dssp EEEHHHHHHHH
T ss_pred EEEHHHHHHHH
Confidence 99999998764
No 65
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=98.98 E-value=7.8e-10 Score=87.55 Aligned_cols=73 Identities=23% Similarity=0.235 Sum_probs=63.5
Q ss_pred CcceeccccCCCccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccc
Q 030127 68 SGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (182)
Q Consensus 68 ~g~~~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~ 142 (182)
-|.+...++.......+++++|++ ++.++++++++.++++.|.++++..+||+|++|+++|+||.+|++....
T Consensus 101 vGivt~~dll~~~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i~ 173 (205)
T 3kxr_A 101 LGTVRRYDIFKHEPHEPLISLLSE--DSRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRVTLRAATALVR 173 (205)
T ss_dssp EEEEEHHHHTTSCTTSBGGGGCCS--SCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred EEEEEHHHHHhCCCcchHHHHhcC--CCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHHHHHHH
Confidence 355556665445567799999998 8999999999999999999999999999999999999999999987654
No 66
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.98 E-value=1.7e-09 Score=71.90 Aligned_cols=48 Identities=27% Similarity=0.396 Sum_probs=43.7
Q ss_pred eEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhcccc
Q 030127 95 LHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143 (182)
Q Consensus 95 ~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~~ 143 (182)
++++.+++++.+|+++|.+++++++||+| +|+++||+|.+|+++....
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d-~~~lvGIvT~~Di~~~~~~ 49 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME-GDEILGVVTERDILDKVVA 49 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHTTT
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHh
Confidence 68999999999999999999999999998 6899999999999865433
No 67
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=98.98 E-value=6.1e-10 Score=84.72 Aligned_cols=60 Identities=27% Similarity=0.347 Sum_probs=55.2
Q ss_pred cccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhcccc
Q 030127 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143 (182)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~~ 143 (182)
...+++++|++ +++++.+++++.+|++.|.+++++++||+| +|+++|+||.+||+++...
T Consensus 103 ~~~~v~~im~~--~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd-~g~lvGivt~~Dil~~l~~ 162 (170)
T 4esy_A 103 RKLTASAVMTQ--PVVTAAPEDSVGSIADQMRRHGIHRIPVVQ-DGVPVGIVTRRDLLKLLLL 162 (170)
T ss_dssp TTCBHHHHCBC--CSCCBCTTSBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHTTTSCC
T ss_pred cccchhhhccc--CcccCCcchhHHHHHHHHHHcCCcEEEEEE-CCEEEEEEEHHHHHHHHHh
Confidence 35689999999 999999999999999999999999999999 6999999999999987643
No 68
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=98.97 E-value=1.3e-09 Score=78.82 Aligned_cols=59 Identities=27% Similarity=0.297 Sum_probs=53.7
Q ss_pred ccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhcc
Q 030127 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (182)
Q Consensus 80 ~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~ 141 (182)
....+++++|.+ +.++.+++++.+|++.|.++++..+||+|++|+++|+||.+|+++..
T Consensus 66 ~~~~~v~~~m~~---~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~dll~~l 124 (127)
T 3nqr_A 66 AEAFSMDKVLRT---AVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELI 124 (127)
T ss_dssp CCCCCHHHHCBC---CCEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHHHHHHC
T ss_pred CCCCCHHHHcCC---CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHH
Confidence 356789999954 67899999999999999999999999999999999999999999765
No 69
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.97 E-value=6.3e-11 Score=105.33 Aligned_cols=93 Identities=22% Similarity=0.300 Sum_probs=6.7
Q ss_pred ccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccc---------c-----------
Q 030127 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS---------I----------- 143 (182)
Q Consensus 84 ~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~---------~----------- 143 (182)
+++++|++ +++++.+++++.++++.|.+++++.+||+|++++++|+||.+|++.... .
T Consensus 96 ~~~~iM~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~~~~~~~~~v~~im~~~~~~~~v~~~ 173 (494)
T 1vrd_A 96 KTENGIIY--DPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVRFEKNLSKKIKDLMTPREKLIVAPPD 173 (494)
T ss_dssp TC------------------------------------------------------------------------------
T ss_pred hHhhcCcc--CCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHHhhcCCCCcHHHHhCCCCCCeEECCC
Confidence 57889998 9999999999999999999999999999998899999999999974100 0
Q ss_pred -------CCCccCCCceeEeecCCCcEEEEEeHHHHHHHhhh
Q 030127 144 -------SGSGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGR 178 (182)
Q Consensus 144 -------~~~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~ 178 (182)
..+...+...+||+|++++++|+|+..|+++.+..
T Consensus 174 ~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~~ 215 (494)
T 1vrd_A 174 ISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIEH 215 (494)
T ss_dssp -----------------------------------CHHHHTC
T ss_pred CCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhcc
Confidence 01345566789999999999999999999998754
No 70
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=98.96 E-value=6e-10 Score=81.79 Aligned_cols=58 Identities=21% Similarity=0.157 Sum_probs=54.0
Q ss_pred cccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhcc
Q 030127 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (182)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~ 141 (182)
...+++++|.+ ++.++.++ ++.+|++.|.+++++.+||+|++|+++|+||.+|+++..
T Consensus 69 ~~~~v~~~m~~--~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dll~~~ 126 (141)
T 2rih_A 69 LDGPAMPIANS--PITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDLCFER 126 (141)
T ss_dssp TTSBSGGGCBC--CCEEETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHSCH
T ss_pred CCCCHHHHcCC--CCeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHHHHHH
Confidence 45789999998 89999999 999999999999999999999889999999999998754
No 71
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=98.96 E-value=5.2e-10 Score=79.76 Aligned_cols=58 Identities=28% Similarity=0.424 Sum_probs=54.3
Q ss_pred cccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccc
Q 030127 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (182)
Q Consensus 83 ~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~ 142 (182)
.+++++|.+ ++.++.+++++.++++.|.+++++.+||+|++|+++|+||.+|+++...
T Consensus 62 ~~v~~~~~~--~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~l~ 119 (122)
T 3kpb_A 62 KTIEEIMTR--NVITAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLFG 119 (122)
T ss_dssp CBGGGTSBS--SCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHC
T ss_pred cCHHHHhcC--CCeEECCCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHHHHhh
Confidence 389999998 8999999999999999999999999999998899999999999998654
No 72
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=98.95 E-value=4.4e-10 Score=81.47 Aligned_cols=60 Identities=25% Similarity=0.367 Sum_probs=55.3
Q ss_pred cccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccc
Q 030127 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (182)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~ 142 (182)
...+++++|.+ ++.++.+++++.++++.|.+++.+.+||+|++|+++|+||..|+++...
T Consensus 65 ~~~~v~~~~~~--~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~ 124 (133)
T 2ef7_A 65 LETKAEEFMTA--SLITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAID 124 (133)
T ss_dssp TTCBGGGTSEE--CCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred cccCHHHHcCC--CCEEECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 45689999998 8999999999999999999999999999998899999999999987643
No 73
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=98.94 E-value=8.2e-11 Score=104.93 Aligned_cols=91 Identities=21% Similarity=0.235 Sum_probs=3.5
Q ss_pred cccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhcccc-------------------
Q 030127 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI------------------- 143 (182)
Q Consensus 83 ~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~~------------------- 143 (182)
.+++++|.. ++.++.+++++.+++++|.+++++.+||+| +++++|+||.+|+......
T Consensus 88 k~~~~~m~~--~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd-~g~lvGIVt~rDl~~~~~~~~~V~~vMtp~~~~vtv~~ 164 (490)
T 4avf_A 88 KKHETAIVR--DPVTVTPSTKIIELLQMAREYGFSGFPVVE-QGELVGIVTGRDLRVKPNAGDTVAAIMTPKDKLVTARE 164 (490)
T ss_dssp HHCCC---------------------------------------------------------------------------
T ss_pred cccccCccc--CceEeCCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEhHHhhhccccCCcHHHHhccCCCCEEECC
Confidence 467889998 999999999999999999999999999999 8999999999999631100
Q ss_pred --------CCCccCCCceeEeecCCCcEEEEEeHHHHHHHh
Q 030127 144 --------SGSGRADNSMFPEVDSTWKVHSTRCRSCLVKPM 176 (182)
Q Consensus 144 --------~~~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l 176 (182)
..+.+.+...+||+|++++++|+||++|+++..
T Consensus 165 ~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~ 205 (490)
T 4avf_A 165 GTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAK 205 (490)
T ss_dssp -----------------------------------------
T ss_pred CCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhc
Confidence 014456777899999999999999999999875
No 74
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=98.94 E-value=4.2e-10 Score=82.84 Aligned_cols=61 Identities=33% Similarity=0.490 Sum_probs=55.7
Q ss_pred cccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhcccc
Q 030127 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143 (182)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~~ 143 (182)
...++.++|.+ ++.++.+++++.++++.|.+++++.+||+|++|+++|+||.+|+++....
T Consensus 83 ~~~~v~~~m~~--~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~~~ 143 (152)
T 4gqw_A 83 NGKLVGDLMTP--APLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQ 143 (152)
T ss_dssp -CCBHHHHSEE--SCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred ccccHHHhcCC--CceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHHHHHHHHh
Confidence 45689999999 89999999999999999999999999999989999999999999986543
No 75
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=98.93 E-value=2.2e-09 Score=77.92 Aligned_cols=59 Identities=17% Similarity=0.139 Sum_probs=52.7
Q ss_pred cccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccc
Q 030127 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (182)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~ 142 (182)
...+++++|.+ +.++.+++++.+|++.|.++++..+||+|++|+++|+||.+|+++...
T Consensus 67 ~~~~v~~~m~~---~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~l~ 125 (129)
T 3jtf_A 67 PALDIRSLVRP---AVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTMEDVLEQIV 125 (129)
T ss_dssp TTSCGGGGCBC---CCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHHHH
T ss_pred CCcCHHHHhCC---CeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 46689999954 789999999999999999999999999998899999999999997653
No 76
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=98.93 E-value=7.2e-10 Score=80.51 Aligned_cols=88 Identities=18% Similarity=0.176 Sum_probs=64.6
Q ss_pred ccchhhhhh-hcccCcccCcceeccccCCCccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEE
Q 030127 51 TSSDRVSAL-RRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLV 129 (182)
Q Consensus 51 r~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lv 129 (182)
+.+++++.. ++..|.+....+..... ......+++++|. ++.++.+++++.+|++.|.++++..+||+|++|+++
T Consensus 40 ~~~pVvd~~~~~~~Givt~~dl~~~~~-~~~~~~~v~~~m~---~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~v 115 (130)
T 3i8n_A 40 SRPLVYSEQKDNIIGFVHRLELFKMQQ-SGSGQKQLGAVMR---PIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVL 115 (130)
T ss_dssp SCCEEESSSTTCEEEECCHHHHHHHHH-TTTTTSBHHHHSE---ECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEE
T ss_pred CEEEEEeCCCCcEEEEEEHHHHHHHHh-cCCCcCCHHHHhc---CCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEE
Confidence 345566543 44444443333322211 1224668999994 588999999999999999999999999999899999
Q ss_pred EEEeHHHHHhccc
Q 030127 130 GLVSDYDLLALDS 142 (182)
Q Consensus 130 GiVt~~Dll~~~~ 142 (182)
|+||.+|+++...
T Consensus 116 Givt~~dil~~l~ 128 (130)
T 3i8n_A 116 GLVTLEDIFEHLV 128 (130)
T ss_dssp EEEEHHHHHHHHH
T ss_pred EEEEHHHHHHHHc
Confidence 9999999997653
No 77
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=98.92 E-value=1e-09 Score=83.76 Aligned_cols=59 Identities=20% Similarity=0.127 Sum_probs=54.8
Q ss_pred ccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhcccc
Q 030127 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143 (182)
Q Consensus 82 ~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~~ 143 (182)
..+++++| + ++.++.+++++.+|++.|.++++..+||+|++|+++|+||.+|+++....
T Consensus 106 ~~~v~~im-~--~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dil~~l~~ 164 (172)
T 3lhh_A 106 RLELVDLV-K--NCNFVPNSLSGMELLEHFRTTGSQMVFVVDEYGDLKGLVTLQDMMDALTG 164 (172)
T ss_dssp CCCGGGGC-B--CCEEEETTCCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHT
T ss_pred cccHHHHh-c--CCeEeCCCCCHHHHHHHHHHcCCeEEEEEeCCCCEEEEeeHHHHHHHHhC
Confidence 67899999 7 89999999999999999999999999999988999999999999987543
No 78
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.91 E-value=2.6e-09 Score=84.57 Aligned_cols=72 Identities=21% Similarity=0.228 Sum_probs=62.1
Q ss_pred CcceeccccCCCccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhcc
Q 030127 68 SGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (182)
Q Consensus 68 ~g~~~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~ 141 (182)
.|.+...++.......+++++|++ ++.++.+++++.+|++.|.+++++.+||+|++|+++|+||.+|+++..
T Consensus 57 ~Givt~~dl~~~~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~ 128 (213)
T 1vr9_A 57 RGVVNKEDLLDLDLDSSVFNKVSL--PDFFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEAL 128 (213)
T ss_dssp EEEEEGGGGTTSCTTSBSGGGCBC--TTCCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHH
T ss_pred EEEEEHHHHHhhcCCCcHHHHccC--CCEEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHH
Confidence 455566665444456789999999 899999999999999999999999999999889999999999998754
No 79
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=98.91 E-value=1.2e-10 Score=104.10 Aligned_cols=93 Identities=18% Similarity=0.079 Sum_probs=2.4
Q ss_pred ccccc-cccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCC---CcEEEEEeHHHHHhc-----------ccc-----
Q 030127 84 TVGDF-MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD---WKLVGLVSDYDLLAL-----------DSI----- 143 (182)
Q Consensus 84 ~V~di-M~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~---g~lvGiVt~~Dll~~-----------~~~----- 143 (182)
+..++ |++ +++++.+++++.++++.|.+++++.+||+|++ |+++|+||.+|++.. ...
T Consensus 97 ~~~e~gM~~--~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~~~~~~~~~V~diM~~~~~~~ 174 (503)
T 1me8_A 97 KNFKAGFVV--SDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPIDLTQTETKVSDMMTPFSKLV 174 (503)
T ss_dssp HTTTC---------------------------------------------------------------------------
T ss_pred hhcccCccc--CCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHhhhccccCcHHHHhCCCCCCE
Confidence 44455 998 99999999999999999999999999999987 899999999999741 000
Q ss_pred ------------CCCccCCCceeEeecCCCcEEEEEeHHHHHHHhhh
Q 030127 144 ------------SGSGRADNSMFPEVDSTWKVHSTRCRSCLVKPMGR 178 (182)
Q Consensus 144 ------------~~~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~~ 178 (182)
..|...+...+||+|++++++|+||.+|+++.+..
T Consensus 175 tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~ 221 (503)
T 1me8_A 175 TAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQVC 221 (503)
T ss_dssp -----------------------------------------------
T ss_pred EEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHHhhhc
Confidence 01445677789999999999999999999988743
No 80
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=98.88 E-value=7e-10 Score=80.73 Aligned_cols=88 Identities=22% Similarity=0.294 Sum_probs=64.9
Q ss_pred cchhhhhhhcccCcccCcce-eccccCCCccccccccccccCCCeEEEcCCCCHHHHHHHHHHcC-----CCEEEEeeCC
Q 030127 52 SSDRVSALRRSSAVFASGTL-TANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKR-----ITGFPVIDDD 125 (182)
Q Consensus 52 ~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~-----~~~lPVvD~~ 125 (182)
..++++..++..|.+....+ ...-........+++++|.+ ++.++.+++++.++++.|.+++ ++.+||+|++
T Consensus 41 ~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~ 118 (138)
T 2p9m_A 41 SLPVIDDENKVIGIVTTTDIGYNLIRDKYTLETTIGDVMTK--DVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKN 118 (138)
T ss_dssp EEEEECTTCBEEEEEEHHHHHHHHTTTCCCSSCBHHHHSCS--SCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTT
T ss_pred EEEEECCCCeEEEEEEHHHHHHHHHhhcccCCcCHHHHhCC--CcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCC
Confidence 44555544444444433333 22111223356789999998 8999999999999999999999 9999999988
Q ss_pred CcEEEEEeHHHHHhcc
Q 030127 126 WKLVGLVSDYDLLALD 141 (182)
Q Consensus 126 g~lvGiVt~~Dll~~~ 141 (182)
|+++|+||.+|+++..
T Consensus 119 g~~~Giit~~dll~~~ 134 (138)
T 2p9m_A 119 NKLVGIISDGDIIRTI 134 (138)
T ss_dssp SBEEEEEEHHHHHHHH
T ss_pred CeEEEEEEHHHHHHHH
Confidence 9999999999998754
No 81
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=98.88 E-value=3.8e-09 Score=78.13 Aligned_cols=58 Identities=19% Similarity=0.242 Sum_probs=54.0
Q ss_pred ccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccc
Q 030127 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (182)
Q Consensus 82 ~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~ 142 (182)
..+++++| + ++.++.+++++.+|++.|.++++..+||+|++|+++|+||.+|+++...
T Consensus 87 ~~~v~~~m-~--~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~ 144 (148)
T 3lv9_A 87 KIELEEIL-R--DIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEIV 144 (148)
T ss_dssp CCCGGGTC-B--CCEEEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEEEHHHHHHHHH
T ss_pred CccHHHhc-C--CCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 66899999 6 7999999999999999999999999999998899999999999997653
No 82
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=98.87 E-value=1.8e-09 Score=80.45 Aligned_cols=89 Identities=17% Similarity=0.158 Sum_probs=65.0
Q ss_pred ccchhhhhhhcccCcccCcceeccccCC--Cccccccccccc------cCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEe
Q 030127 51 TSSDRVSALRRSSAVFASGTLTANSAAP--SSGVYTVGDFMT------TKEELHVVKPTTTVDEALEILVEKRITGFPVI 122 (182)
Q Consensus 51 r~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~V~diM~------~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVv 122 (182)
+++++++..++..|.+....+....... .....++.++|. + ++.++.+++++.++++.|.++++..+||+
T Consensus 53 ~~~pVvd~~~~~vGivt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVv 130 (152)
T 2uv4_A 53 SALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVSVTKALQHRSHYFE--GVLKCYLHETLETIINRLVEAEVHRLVVV 130 (152)
T ss_dssp SEEEEECTTSBEEEEEEHHHHHHHHHCSSCCCTTSBGGGGGGTCCHHHH--TCSEECTTSBHHHHHHHHHHHTCSEEEEE
T ss_pred ceEeEECCCCcEEEEEeHHHHHHHhcchhhhhhcchHHHHHhhhhcccC--CCeEECCCCcHHHHHHHHHHcCCeEEEEE
Confidence 3456665444444444333332211111 123568999996 6 78999999999999999999999999999
Q ss_pred eCCCcEEEEEeHHHHHhcc
Q 030127 123 DDDWKLVGLVSDYDLLALD 141 (182)
Q Consensus 123 D~~g~lvGiVt~~Dll~~~ 141 (182)
|++|+++|+||..|+++..
T Consensus 131 d~~g~~vGiit~~dil~~l 149 (152)
T 2uv4_A 131 DENDVVKGIVSLSDILQAL 149 (152)
T ss_dssp CTTSBEEEEEEHHHHHHHH
T ss_pred CCCCeEEEEEEHHHHHHHH
Confidence 9889999999999998764
No 83
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=98.87 E-value=2e-09 Score=77.92 Aligned_cols=89 Identities=18% Similarity=0.316 Sum_probs=65.5
Q ss_pred ccchhhhhhhcccCcccCcceeccccC--CCccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcE
Q 030127 51 TSSDRVSALRRSSAVFASGTLTANSAA--PSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKL 128 (182)
Q Consensus 51 r~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~l 128 (182)
+++++++..++..|.+....+....+. ......+++++|.+ ++.++.+++++.++++.|.+++++.+||+|+ |++
T Consensus 40 ~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-g~~ 116 (133)
T 1y5h_A 40 GALPICGDDDRLHGMLTDRDIVIKGLAAGLDPNTATAGELARD--SIYYVDANASIQEMLNVMEEHQVRRVPVISE-HRL 116 (133)
T ss_dssp SEEEEECGGGBEEEEEEHHHHHHTTGGGTCCTTTSBHHHHHTT--CCCCEETTCCHHHHHHHHHHHTCSEEEEEET-TEE
T ss_pred CeEEEECCCCeEEEEEeHHHHHHHHHhcCCCccccCHHHHhcC--CCEEECCCCCHHHHHHHHHHcCCCEEEEEEC-CEE
Confidence 345555544444444433333211111 12245789999998 8999999999999999999999999999997 999
Q ss_pred EEEEeHHHHHhccc
Q 030127 129 VGLVSDYDLLALDS 142 (182)
Q Consensus 129 vGiVt~~Dll~~~~ 142 (182)
+|+||.+|+++...
T Consensus 117 ~Giit~~dil~~l~ 130 (133)
T 1y5h_A 117 VGIVTEADIARHLP 130 (133)
T ss_dssp EEEEEHHHHHHTCC
T ss_pred EEEEEHHHHHHHHH
Confidence 99999999998653
No 84
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=98.85 E-value=5e-09 Score=78.17 Aligned_cols=59 Identities=19% Similarity=0.196 Sum_probs=54.8
Q ss_pred ccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhcccc
Q 030127 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143 (182)
Q Consensus 82 ~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~~ 143 (182)
..+++++| + ++.++.+++++.+|++.|.++++..+||+|++|+++|+||..|+++....
T Consensus 85 ~~~v~~~m-~--~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~~ 143 (153)
T 3oco_A 85 KAKISTIM-R--DIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEELFG 143 (153)
T ss_dssp TSBGGGTC-B--CCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHHHC
T ss_pred CCcHHHHh-C--CCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHhc
Confidence 66899999 7 79999999999999999999999999999988999999999999987643
No 85
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=98.84 E-value=1.2e-09 Score=82.64 Aligned_cols=61 Identities=25% Similarity=0.269 Sum_probs=55.9
Q ss_pred ccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhcccc
Q 030127 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143 (182)
Q Consensus 80 ~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~~ 143 (182)
....+++++|.+ ++.++.+++++.++++.|.+++++.+||+|+ |+++|+||..|+++....
T Consensus 90 ~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~~~Giit~~dil~~~~~ 150 (165)
T 3fhm_A 90 SLQQSVSVAMTK--NVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN-GRLAGIISIGDVVKARIG 150 (165)
T ss_dssp GGTSBGGGTSBS--SCCCBCTTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHTTC
T ss_pred cccCCHHHHhcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHH
Confidence 346789999998 8999999999999999999999999999998 999999999999987543
No 86
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=98.84 E-value=2.8e-09 Score=79.96 Aligned_cols=55 Identities=20% Similarity=0.194 Sum_probs=51.1
Q ss_pred cccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHH
Q 030127 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138 (182)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll 138 (182)
...+++++|.+ +.++.+++++.+|++.|.++++..+||+|++|+++|+||.+|++
T Consensus 101 ~~~~v~~im~~---~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 101 EQFHLKSILRP---AVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDII 155 (156)
T ss_dssp GGCCHHHHCBC---CCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEHHHHC
T ss_pred CcccHHHHcCC---CEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEHHHhc
Confidence 46789999965 78999999999999999999999999999999999999999986
No 87
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=98.84 E-value=2e-09 Score=79.83 Aligned_cols=86 Identities=24% Similarity=0.275 Sum_probs=63.6
Q ss_pred ccchhhhhhhcccCcccCcceeccccCC-CccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEE
Q 030127 51 TSSDRVSALRRSSAVFASGTLTANSAAP-SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLV 129 (182)
Q Consensus 51 r~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lv 129 (182)
.+.++++..++..|.+....+...-... .....+++++|.+ ++.++.+++++.++++.|.++++..+||+|++ +++
T Consensus 62 ~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-~~~ 138 (149)
T 3k2v_A 62 GMTAICDDDMNIIGIFTDGDLRRVFDTGVDMRDASIADVMTR--GGIRIRPGTLAVDALNLMQSRHITCVLVADGD-HLL 138 (149)
T ss_dssp SEEEEECTTCBEEEEEEHHHHHHHHCSSSCCTTCBHHHHSEE--SCCEECTTCBHHHHHHHHHHHTCSEEEEEETT-EEE
T ss_pred cEEEEECCCCcEEEEecHHHHHHHHhcCCCcccCcHHHHcCC--CCeEECCCCCHHHHHHHHHHcCCCEEEEecCC-EEE
Confidence 4456665444444444333332211111 2256789999999 89999999999999999999999999999965 999
Q ss_pred EEEeHHHHHh
Q 030127 130 GLVSDYDLLA 139 (182)
Q Consensus 130 GiVt~~Dll~ 139 (182)
|+||.+|+++
T Consensus 139 Giit~~dil~ 148 (149)
T 3k2v_A 139 GVVHMHDLLR 148 (149)
T ss_dssp EEEEHHHHTC
T ss_pred EEEEHHHhhc
Confidence 9999999975
No 88
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=98.84 E-value=3.8e-09 Score=76.92 Aligned_cols=58 Identities=19% Similarity=0.079 Sum_probs=53.0
Q ss_pred ccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccc
Q 030127 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (182)
Q Consensus 82 ~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~ 142 (182)
..+++++| + ++.++.+++++.++++.|.++++..+||+|++|+++|+||.+|+++...
T Consensus 69 ~~~v~~~m-~--~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~ 126 (130)
T 3hf7_A 69 KEIMLRAA-D--EIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIV 126 (130)
T ss_dssp HHHHHHHS-B--CCCEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred hhhHHHhc-c--CCeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHHh
Confidence 45799999 4 6899999999999999999999999999998999999999999998653
No 89
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=98.84 E-value=2.8e-09 Score=80.77 Aligned_cols=60 Identities=30% Similarity=0.493 Sum_probs=55.7
Q ss_pred cccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccc
Q 030127 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (182)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~ 142 (182)
...+++++|++ ++.++.+++++.+|++.|.++++..+||+|++|+++|+||.+|+++...
T Consensus 96 ~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~~~ 155 (180)
T 3sl7_A 96 YGKVVGDLMTP--SPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAAL 155 (180)
T ss_dssp TTCBHHHHSEE--SCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred ccccHHHHhCC--CceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 45689999999 8999999999999999999999999999998999999999999997653
No 90
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=98.83 E-value=2.1e-09 Score=80.68 Aligned_cols=92 Identities=21% Similarity=0.189 Sum_probs=67.6
Q ss_pred ccchhhhhhhcccCcccCcceecccc-CCCccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCC---
Q 030127 51 TSSDRVSALRRSSAVFASGTLTANSA-APSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDW--- 126 (182)
Q Consensus 51 r~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g--- 126 (182)
.++++++..+...|.+....+..... .......+++++|.+..++.++.+++++.+|++.|.+++++.+||+|++|
T Consensus 48 ~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~ 127 (159)
T 3fv6_A 48 GTLFVVDRDAVLVGVLSRKDLLRASIGQQELTSVPVHIIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGF 127 (159)
T ss_dssp SEEEEECTTSCEEEEEEHHHHHHHHTSCSCTTTCBGGGTSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSE
T ss_pred CEEEEEcCCCcEEEEEeHHHHHHHhhccCcccCcCHHHHHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcce
Confidence 45566665444444443333322211 12335678999998644688999999999999999999999999999888
Q ss_pred cEEEEEeHHHHHhccc
Q 030127 127 KLVGLVSDYDLLALDS 142 (182)
Q Consensus 127 ~lvGiVt~~Dll~~~~ 142 (182)
+++|+||.+|+++...
T Consensus 128 ~~vGiit~~dil~~l~ 143 (159)
T 3fv6_A 128 EVIGRVTKTNMTKILV 143 (159)
T ss_dssp EEEEEEEHHHHHHHHH
T ss_pred eEEEEEEHHHHHHHHH
Confidence 9999999999987643
No 91
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=98.83 E-value=3.2e-09 Score=81.64 Aligned_cols=62 Identities=24% Similarity=0.251 Sum_probs=56.4
Q ss_pred ccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhcccc
Q 030127 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143 (182)
Q Consensus 80 ~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~~ 143 (182)
....+++++|.+ ++.++.+++++.+|++.|.+++++.+||+|++|+++|+||.+|+++....
T Consensus 72 ~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~ 133 (184)
T 1pvm_A 72 PDEVPIRLVMRK--PIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYLSR 133 (184)
T ss_dssp GGGSBGGGTSBS--SCCEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHTTTSCH
T ss_pred cccCCHHHHhCC--CCcEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHh
Confidence 356689999998 89999999999999999999999999999988999999999999876543
No 92
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=98.83 E-value=3.3e-09 Score=77.23 Aligned_cols=89 Identities=21% Similarity=0.241 Sum_probs=65.5
Q ss_pred ccchhhhhhhcccCcccCcceecccc-CCCccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEE
Q 030127 51 TSSDRVSALRRSSAVFASGTLTANSA-APSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLV 129 (182)
Q Consensus 51 r~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lv 129 (182)
.++++++..++..|.+....+....+ .......++.++|.+ ++.++.+++++.++++.|.+++++.+ |+|++|+++
T Consensus 39 ~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~ 115 (138)
T 2yzi_A 39 GSLVVINDDGNVVGFFTKSDIIRRVIVPGLPYDIPVERIMTR--NLITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIV 115 (138)
T ss_dssp SEEEEECTTSCEEEEEEHHHHHHHTTTTCCCTTSBGGGTCBC--SCCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEE
T ss_pred CEEEEEcCCCcEEEEEeHHHHHHHHHhcCCcccCCHHHHhhC--CCeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEE
Confidence 34555554444444433333321111 112346789999998 89999999999999999999999999 999889999
Q ss_pred EEEeHHHHHhccc
Q 030127 130 GLVSDYDLLALDS 142 (182)
Q Consensus 130 GiVt~~Dll~~~~ 142 (182)
|+||..|+++...
T Consensus 116 Giit~~dil~~~~ 128 (138)
T 2yzi_A 116 GIFTLSDLLEASR 128 (138)
T ss_dssp EEEEHHHHHHHHH
T ss_pred EEEEHHHHHHHHH
Confidence 9999999998654
No 93
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=98.82 E-value=4.3e-10 Score=100.72 Aligned_cols=87 Identities=29% Similarity=0.337 Sum_probs=0.0
Q ss_pred ccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeC---CCcEEEEEeHHHHHhccccC--------------------
Q 030127 88 FMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDD---DWKLVGLVSDYDLLALDSIS-------------------- 144 (182)
Q Consensus 88 iM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~---~g~lvGiVt~~Dll~~~~~~-------------------- 144 (182)
.|.. +|+++.|+.|+.|++++|.+++++.+||+|+ +++|+||||.+|+.......
T Consensus 143 g~i~--dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~d~~~~V~evMT~~lvt~~~~~~le 220 (556)
T 4af0_A 143 GFIT--DPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQDAETPIKSVMTTEVVTGSSPITLE 220 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CccC--CCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEecccccccccceEhhhhcccceEEecCCCCHH
Confidence 4666 7999999999999999999999999999986 57999999999986432111
Q ss_pred ----CCccCCCceeEeecCCCcEEEEEeHHHHHHHh
Q 030127 145 ----GSGRADNSMFPEVDSTWKVHSTRCRSCLVKPM 176 (182)
Q Consensus 145 ----~~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l 176 (182)
-+.+++...+||||+++++.|+||++|+++..
T Consensus 221 eA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~~ 256 (556)
T 4af0_A 221 KANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQ 256 (556)
T ss_dssp ------------------------------------
T ss_pred HHHHHHHHccccceeEEccCCcEEEEEEechhhhhh
Confidence 14456777899999999999999999998754
No 94
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.82 E-value=1.5e-08 Score=65.66 Aligned_cols=48 Identities=27% Similarity=0.396 Sum_probs=44.2
Q ss_pred eEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhcccc
Q 030127 95 LHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143 (182)
Q Consensus 95 ~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~~ 143 (182)
+.++.+++++.+|++.|.+++++.+||+|+ |+++|+||.+|+++....
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~dl~~~~~~ 49 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKVVA 49 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHTTT
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHH
Confidence 678999999999999999999999999996 999999999999987543
No 95
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=98.81 E-value=7.2e-09 Score=73.91 Aligned_cols=59 Identities=25% Similarity=0.379 Sum_probs=54.7
Q ss_pred cccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccc
Q 030127 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (182)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~ 142 (182)
...+++++|.+ ++.++.+++++.++++.|.+++++.+||+|+ |+++|+||.+|+++...
T Consensus 63 ~~~~v~~~m~~--~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~Gvit~~dl~~~l~ 121 (125)
T 1pbj_A 63 AEVKVWEVMER--DLVTISPRATIKEAAEKMVKNVVWRLLVEED-DEIIGVISATDILRAKM 121 (125)
T ss_dssp TTSBHHHHCBC--GGGEECTTSCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHHC
T ss_pred cccCHHHHcCC--CCeEECCCCCHHHHHHHHHhcCCcEEEEEEC-CEEEEEEEHHHHHHHHH
Confidence 46789999998 8999999999999999999999999999997 99999999999987653
No 96
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=98.81 E-value=7e-09 Score=75.30 Aligned_cols=60 Identities=28% Similarity=0.407 Sum_probs=55.3
Q ss_pred ccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccc
Q 030127 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (182)
Q Consensus 80 ~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~ 142 (182)
....+++++|.+ ++.++.+++++.++++.|.+++++.+||+| +|+++|+||.+|+++...
T Consensus 71 ~~~~~v~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dll~~~~ 130 (135)
T 2rc3_A 71 VKDTQVKEIMTR--QVAYVDLNNTNEDCMALITEMRVRHLPVLD-DGKVIGLLSIGDLVKDAI 130 (135)
T ss_dssp GGGSBGGGTSBC--SCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHH
T ss_pred cccCCHHHhccC--CCeEECCCCcHHHHHHHHHHhCCCEEEEEe-CCEEEEEEEHHHHHHHHH
Confidence 356789999999 899999999999999999999999999999 799999999999987653
No 97
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.81 E-value=2.7e-09 Score=85.62 Aligned_cols=59 Identities=27% Similarity=0.465 Sum_probs=50.2
Q ss_pred cccccccccc-cCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhcc
Q 030127 81 GVYTVGDFMT-TKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (182)
Q Consensus 81 ~~~~V~diM~-~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~ 141 (182)
...+++++|+ + ++.++.+++++.+|++.|.+++++.+||+|++|+++|+||.+|+++..
T Consensus 183 ~~~~v~~im~~~--~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dll~~~ 242 (245)
T 3l2b_A 183 QSLPVDYVMTKD--NLVAVSTDDLVEDVKVTMSETRYSNYPVIDENNKVVGSIARFHLISTH 242 (245)
T ss_dssp GGSBHHHHSBCT--TCCCEETTSBHHHHHHHHHHHCCSEEEEECTTCBEEEEEECC------
T ss_pred cCCceeeEecCC--ccEEECCCCcHHHHHHHHHhcCCceEEEEcCCCeEEEEEEHHHhhchh
Confidence 3568999999 6 899999999999999999999999999999899999999999998754
No 98
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=98.81 E-value=3.4e-09 Score=80.19 Aligned_cols=57 Identities=25% Similarity=0.417 Sum_probs=52.1
Q ss_pred cccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhcc
Q 030127 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (182)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~ 141 (182)
...+|+++|.+ ++.++.+++++.+|++.|.++++ +||+|++|+++|+||.+|+++..
T Consensus 84 ~~~~v~~im~~--~~~~v~~~~~l~~~~~~m~~~~~--lpVVd~~g~l~GiiT~~Dil~~~ 140 (156)
T 3k6e_A 84 ADTDIVHMTKT--DVAVVSPDFTITEVLHKLVDESF--LPVVDAEGIFQGIITRKSILKAV 140 (156)
T ss_dssp TTSBGGGTCBC--SCCCBCTTCCHHHHHHHTTTSSE--EEEECTTSBEEEEEEHHHHHHHH
T ss_pred cccCHHHhhcC--CceecccccHHHHHHHHHHHcCC--eEEEecCCEEEEEEEHHHHHHHH
Confidence 46789999999 99999999999999999987764 99999999999999999999865
No 99
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=98.79 E-value=3.4e-09 Score=78.81 Aligned_cols=59 Identities=15% Similarity=0.244 Sum_probs=53.7
Q ss_pred cccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhcccc
Q 030127 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143 (182)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~~ 143 (182)
...++.++|.+ ++.++.+++++.+|++.|.++++ +||+|++|+++|+||.+|+++....
T Consensus 81 ~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~~dil~~~~~ 139 (157)
T 2emq_A 81 ETMKVEEVMNR--NIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTRREVLKQLNK 139 (157)
T ss_dssp GTCBGGGTCBC--CCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEHHHHHHHHHH
T ss_pred cCCcHHHHhCC--CCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 46789999999 89999999999999999999987 9999988999999999999976543
No 100
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=98.78 E-value=2.8e-09 Score=80.22 Aligned_cols=58 Identities=22% Similarity=0.373 Sum_probs=54.1
Q ss_pred cccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhcc
Q 030127 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (182)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~ 141 (182)
...++.++|.+ ++.++.+++++.+|++.|.+++++.+||+|+ |+++|+||..|+++..
T Consensus 76 ~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~lvGiit~~dil~~~ 133 (160)
T 2o16_A 76 FETPLFEVMHT--DVTSVAPQAGLKESAIYMQKHKIGCLPVVAK-DVLVGIITDSDFVTIA 133 (160)
T ss_dssp CCCBHHHHSCS--CEEEBCTTSBHHHHHHHHHHTTCSCEEEEET-TEEEEEECHHHHHHHH
T ss_pred cccCHHHHhcC--CCeEECCCCCHHHHHHHHHHhCCCEEEEEEC-CEEEEEEEHHHHHHHH
Confidence 46789999998 8999999999999999999999999999997 9999999999998754
No 101
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=98.78 E-value=1e-08 Score=75.79 Aligned_cols=58 Identities=19% Similarity=0.335 Sum_probs=53.2
Q ss_pred cccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccc
Q 030127 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (182)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~ 142 (182)
...+++++|.+ ++.++.+++++.+|++.|.++++ +||+|++|+++|+||..|+++...
T Consensus 85 ~~~~v~~~m~~--~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~dil~~l~ 142 (150)
T 3lqn_A 85 EEMKVEQVMKQ--DIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRRAILKLLN 142 (150)
T ss_dssp GGCBGGGTCBS--SCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHHHHHHHHH
T ss_pred hcCCHHHHhcC--CCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHHHHHHHHH
Confidence 46789999998 89999999999999999999887 999998999999999999997653
No 102
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=98.76 E-value=6.6e-09 Score=85.42 Aligned_cols=73 Identities=23% Similarity=0.387 Sum_probs=61.7
Q ss_pred CcceeccccCCCccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccc
Q 030127 68 SGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (182)
Q Consensus 68 ~g~~~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~ 142 (182)
-|.+...++.......+++++|.+ ++.++++++++.++++.|.++++..+||+|++|+++|+||..|++....
T Consensus 184 vGivt~~dll~~~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~~Dil~~i~ 256 (278)
T 2yvy_A 184 KGVLSLRDLIVADPRTRVAEIMNP--KVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLE 256 (278)
T ss_dssp EEEEEHHHHHHSCTTCBSTTTSBS--SCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHC-
T ss_pred EEEEEHHHHhcCCCCCcHHHHhCC--CCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEHHHHHHHHH
Confidence 344555554333456799999998 8999999999999999999999999999998999999999999998654
No 103
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=98.76 E-value=8.5e-09 Score=85.41 Aligned_cols=73 Identities=15% Similarity=0.250 Sum_probs=63.7
Q ss_pred CcceeccccCCCccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccc
Q 030127 68 SGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (182)
Q Consensus 68 ~g~~~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~ 142 (182)
-|.+...++.......+++++|.+ ++.++++++++.+|++.|.++++..+||+|++|+++|+||..|++....
T Consensus 186 vGivt~~dll~~~~~~~v~~im~~--~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~~i~ 258 (286)
T 2oux_A 186 VGVISLRDLIVNDDDTLIADILNE--RVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVID 258 (286)
T ss_dssp EEEEEHHHHTTSCTTSBHHHHSBS--CCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred EEEEEHHHHHcCCCCCcHHHHcCC--CCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHH
Confidence 455666666555567799999998 8999999999999999999999999999998999999999999997653
No 104
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=98.74 E-value=1.2e-08 Score=76.00 Aligned_cols=60 Identities=32% Similarity=0.516 Sum_probs=55.8
Q ss_pred cccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhcccc
Q 030127 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143 (182)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~~ 143 (182)
...+++++|.+ ++.++.+++++.++++.|.+++++.+||+| +|+++|+||.+|+++....
T Consensus 76 ~~~~v~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dil~~l~~ 135 (157)
T 4fry_A 76 KATRVEEIMTA--KVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIA 135 (157)
T ss_dssp SSCBHHHHSBS--SCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHT
T ss_pred cccCHHHHcCC--CCcEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHH
Confidence 46789999999 899999999999999999999999999999 7999999999999987654
No 105
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=98.73 E-value=3.8e-09 Score=79.07 Aligned_cols=59 Identities=14% Similarity=0.186 Sum_probs=53.3
Q ss_pred ccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccc
Q 030127 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (182)
Q Consensus 80 ~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~ 142 (182)
....++.++|.+ ++.++.+++++.+|++.|.++++ +||+|++|+++|+||.+|+++...
T Consensus 83 ~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~~dil~~~~ 141 (159)
T 1yav_A 83 LDQITVEEVMLT--DIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTRRVVLKELN 141 (159)
T ss_dssp TTTSBHHHHSBC--SCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEHHHHHHHHH
T ss_pred hccCCHHHhcCC--CCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEHHHHHHHHH
Confidence 356789999999 89999999999999999998876 999998899999999999987643
No 106
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=98.71 E-value=1.7e-08 Score=73.47 Aligned_cols=62 Identities=19% Similarity=0.301 Sum_probs=53.4
Q ss_pred cccccccccccCC----CeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccc
Q 030127 81 GVYTVGDFMTTKE----ELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (182)
Q Consensus 81 ~~~~V~diM~~~~----~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~ 142 (182)
...++.++|.+.. ++.++.+++++.++++.|.++++..+||+|++|+++|+||.+|+++...
T Consensus 75 ~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~ 140 (144)
T 2nyc_A 75 LSLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYIL 140 (144)
T ss_dssp CCSBHHHHHHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred CCccHHHHHhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHH
Confidence 3568999997621 4789999999999999999999999999998899999999999987653
No 107
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=98.70 E-value=3.2e-08 Score=75.26 Aligned_cols=60 Identities=13% Similarity=0.229 Sum_probs=55.2
Q ss_pred ccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccc
Q 030127 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (182)
Q Consensus 80 ~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~ 142 (182)
....++.++|.+ ++.++.+++++.+|++.|.++++..+||+| +|+++|+||.+|+++...
T Consensus 105 ~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~g~~vGiit~~dll~~l~ 164 (185)
T 2j9l_A 105 PPTLKLRNILDL--SPFTVTDLTPMEIVVDIFRKLGLRQCLVTH-NGRLLGIITKKDVLKHIA 164 (185)
T ss_dssp CCCEECGGGEES--SCCEEETTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHH
T ss_pred ccCccHHHhhCc--CCeEeCCCCCHHHHHHHHHhCCCcEEEEEE-CCEEEEEEEHHHHHHHHH
Confidence 345789999998 899999999999999999999999999999 899999999999998654
No 108
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.68 E-value=2.4e-08 Score=74.59 Aligned_cols=60 Identities=22% Similarity=0.345 Sum_probs=54.4
Q ss_pred ccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccc
Q 030127 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (182)
Q Consensus 80 ~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~ 142 (182)
....+++++|.+ +.++.+++++.+|++.|.++++..+||+|++|+++|+||.+|+++...
T Consensus 93 ~~~~~v~~im~~---~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dll~~l~ 152 (157)
T 1o50_A 93 LIAKNASEIMLD---PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLALW 152 (157)
T ss_dssp CSSCBHHHHCBC---CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred HcCCcHHHHcCC---CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHHHHHHHH
Confidence 356789999986 789999999999999999999999999998899999999999987653
No 109
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.67 E-value=3.5e-10 Score=101.09 Aligned_cols=93 Identities=24% Similarity=0.316 Sum_probs=50.6
Q ss_pred cccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeC---CCcEEEEEeHHHHHhccc---c--------C--C-
Q 030127 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDD---DWKLVGLVSDYDLLALDS---I--------S--G- 145 (182)
Q Consensus 83 ~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~---~g~lvGiVt~~Dll~~~~---~--------~--~- 145 (182)
.+++++|.+ +++++.+++++.+++++|.+++++.+||+|+ +++++|+||.+|+..... . . .
T Consensus 108 ~~~~~im~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~~~~~~~v~~vm~~~~~~ 185 (514)
T 1jcn_A 108 KNFEQGFIT--DPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAEKDHTTLLSEVMTPRIEL 185 (514)
T ss_dssp HTCCTTSCS--SCCCCCC-----------------CEESCC--------CCEECTTTTC----------------CCBCC
T ss_pred hhhhhcccc--CCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhhccCCCCHHHHhCCCCCC
Confidence 367899998 8999999999999999999999999999997 589999999999865310 0 0 0
Q ss_pred ---------------CccCCCceeEeecCCCcEEEEEeHHHHHHHhh
Q 030127 146 ---------------SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMG 177 (182)
Q Consensus 146 ---------------~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~ 177 (182)
+...+...+||+|++++++|+||+.|+++.+.
T Consensus 186 ~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~ 232 (514)
T 1jcn_A 186 VVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKNRD 232 (514)
T ss_dssp CCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSSCCC
T ss_pred eEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHHHhh
Confidence 22345567899999999999999999887654
No 110
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=98.63 E-value=2.6e-08 Score=74.06 Aligned_cols=57 Identities=25% Similarity=0.384 Sum_probs=52.3
Q ss_pred ccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccc
Q 030127 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (182)
Q Consensus 82 ~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~ 142 (182)
..+++++|.+ ++.++.+++++.+|++.|.+++ .+||+|++|+++|+||.+|+++...
T Consensus 85 ~~~v~~~m~~--~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~~dil~~l~ 141 (156)
T 3ctu_A 85 DTDIVHMTKT--DVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVN 141 (156)
T ss_dssp TSBGGGGCBC--SCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEETTHHHHHHH
T ss_pred cCcHHHhccC--CceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEHHHHHHHHH
Confidence 6789999998 8999999999999999999886 7999998899999999999998654
No 111
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.62 E-value=4.1e-09 Score=93.61 Aligned_cols=91 Identities=25% Similarity=0.315 Sum_probs=2.1
Q ss_pred ccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhc--------cc-----c-------
Q 030127 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL--------DS-----I------- 143 (182)
Q Consensus 84 ~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~--------~~-----~------- 143 (182)
.+.+.|.. ++.++.+++++.++++.|.+++++.+||+|+ ++++|+|+.+|++.. .. .
T Consensus 94 ~~~~~m~~--~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~-~~lvGivt~~Dl~~~~~~~v~~im~~~~~~v~~~~~l~ 170 (486)
T 2cu0_A 94 RAERLIVE--DVITIAPDETVDFALFLMEKHGIDGLPVVED-EKVVGIITKKDIAAREGKLVKELMTKEVITVPESIEVE 170 (486)
T ss_dssp TCC-----------------------------------------------------------------------------
T ss_pred chhhcccc--CceEECCCCCHHHHHHHHHHcCCcEEEEEEC-CEEEEEEEHHHhccCCCCCHHHHccCCCeEECCcCcHH
Confidence 45678988 9999999999999999999999999999997 999999999998630 00 0
Q ss_pred ---CCCccCCCceeEeecCCCcEEEEEeHHHHHHHhh
Q 030127 144 ---SGSGRADNSMFPEVDSTWKVHSTRCRSCLVKPMG 177 (182)
Q Consensus 144 ---~~~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~ 177 (182)
..+...+...+||+|++++++|++|.+|+++...
T Consensus 171 eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil~~~~ 207 (486)
T 2cu0_A 171 EALKIMIENRIDRLPVVDERGKLVGLITMSDLVARKK 207 (486)
T ss_dssp ------------------------------------C
T ss_pred HHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHHHhhh
Confidence 1144556678999999999999999999998864
No 112
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=98.61 E-value=3.1e-08 Score=87.76 Aligned_cols=73 Identities=23% Similarity=0.387 Sum_probs=62.7
Q ss_pred CcceeccccCCCccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccc
Q 030127 68 SGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (182)
Q Consensus 68 ~g~~~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~ 142 (182)
-|.+..+++.....+.+++++|++ ++.++++++++.++++.|.++++..+||+|++|+++|+||.+|++....
T Consensus 204 vGiVt~~Dll~~~~~~~v~dim~~--~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvGiIT~~Dil~~i~ 276 (473)
T 2zy9_A 204 KGVLSLRDLIVADPRTRVAEIMNP--KVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLE 276 (473)
T ss_dssp EEEEEHHHHHHSCTTSBGGGTSBS--SCCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred EEEEEHHHHhcCCCCCcHHHHhCC--CCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEEEEehHhhHHHHH
Confidence 455555555334466799999998 8999999999999999999999999999999999999999999987643
No 113
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=98.58 E-value=6.2e-08 Score=72.14 Aligned_cols=58 Identities=17% Similarity=0.116 Sum_probs=52.6
Q ss_pred ccccccccccCCC------eEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccc
Q 030127 82 VYTVGDFMTTKEE------LHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (182)
Q Consensus 82 ~~~V~diM~~~~~------~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~ 142 (182)
..++.++|.+ + +.++.+++++.+|++.|.+++++.+||+| +|+++|+||.+|+++...
T Consensus 83 ~~~v~~~m~~--~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~l~Giit~~dil~~~~ 146 (164)
T 2pfi_A 83 QQCLQDILAR--GCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS-RGRAVGCVSWVEMKKAIS 146 (164)
T ss_dssp CCBHHHHHHT--TCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHHH
T ss_pred cchhhhhhcc--cccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEHHHHHHHHH
Confidence 3579999987 6 78999999999999999999999999999 799999999999987654
No 114
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=98.57 E-value=8.2e-08 Score=73.67 Aligned_cols=58 Identities=16% Similarity=0.073 Sum_probs=51.6
Q ss_pred ccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhcccc
Q 030127 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143 (182)
Q Consensus 82 ~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~~ 143 (182)
..+++ |.+ ++.++.+++++.+|++.|.++++..+||+|++|+++|+||.+|++.....
T Consensus 100 ~~~v~--~~~--~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~g~lvGiIT~~Dil~~l~~ 157 (173)
T 3ocm_A 100 RVRRN--RLR--DPIIVHESIGILRLMDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAG 157 (173)
T ss_dssp SCCGG--GSB--CCCEECGGGCHHHHHHHHHHSTTCCEEEECTTCCEEEEECHHHHHHHHHC
T ss_pred cchhH--hcC--CCeEECCCCcHHHHHHHHHHcCCeEEEEEeCCCCEEEEEeHHHHHHHHhC
Confidence 45677 445 68999999999999999999999999999989999999999999987653
No 115
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=98.54 E-value=5.5e-08 Score=88.97 Aligned_cols=56 Identities=21% Similarity=0.045 Sum_probs=50.7
Q ss_pred ccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccc
Q 030127 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (182)
Q Consensus 84 ~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~ 142 (182)
+++++|++ ++.++++++++.++++.|.+++++.+||+ ++|+++|+||.+|+++...
T Consensus 569 ~v~~iMt~--~pitV~~~~~l~ea~~~M~~~~i~~lpVv-e~G~lvGIVT~~Dll~~~~ 624 (632)
T 3org_A 569 SLVVPCDV--SPIVVTSYSLVRQLHFLFVMLMPSMIYVT-ERGKLVGIVEREDVAYGYS 624 (632)
T ss_dssp --CCSCCC--CCCEEETTCBHHHHHHHHHHTCCSEEEEE-ETTEEEEEEEGGGTEECCC
T ss_pred ccchhhcC--CCceecCCCcHHHHHHHHHhcCCCEEEEE-ECCEEEEEEehhhHHHHHh
Confidence 38899999 99999999999999999999999999999 5899999999999987643
No 116
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=98.41 E-value=2.5e-07 Score=75.64 Aligned_cols=53 Identities=15% Similarity=0.045 Sum_probs=49.5
Q ss_pred cccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccc
Q 030127 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (182)
Q Consensus 87 diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~ 142 (182)
.+|.+ .++++.+++++.++..+|.+.+++++||++ +|+|+||||++||++++.
T Consensus 193 ~~md~--sP~tv~~~tsL~~v~~LF~~lglr~l~V~~-~GrLVGIVTrkDl~kai~ 245 (250)
T 2d4z_A 193 CRIDQ--SPFQLVEGTSLQKTHTLFSLLGLDRAYVTS-MGKLVGVVALAEIQAAIE 245 (250)
T ss_dssp SCEEC--CSCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHH
T ss_pred ccccC--CCeEECCCCcHHHHHHHHHHhCCeEEEEEE-CCEEEEEEEHHHHHHHHH
Confidence 47999 999999999999999999999999999998 799999999999998754
No 117
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=98.35 E-value=6.7e-07 Score=80.04 Aligned_cols=75 Identities=27% Similarity=0.343 Sum_probs=62.1
Q ss_pred CcceeccccC-CCccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhcccc
Q 030127 68 SGTLTANSAA-PSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143 (182)
Q Consensus 68 ~g~~~~~~~~-~~~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~~ 143 (182)
.|.+...++. ......+++++|++ ++++++++++++.++++.|.++++..+||+|++|+++|+||.+|+++....
T Consensus 159 vGiVt~rDl~~~~~~~~~V~~vM~~-~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~ 234 (511)
T 3usb_A 159 VGIITNRDMRFIQDYSIKISDVMTK-EQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEF 234 (511)
T ss_dssp EEEEEHHHHTTCCCSSSBHHHHCCC-CCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred EEEEEehHhhhhccCCCcHHHhccc-CCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhc
Confidence 3445555543 23456789999995 368999999999999999999999999999999999999999999976543
No 118
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=98.33 E-value=6.3e-08 Score=86.81 Aligned_cols=72 Identities=26% Similarity=0.343 Sum_probs=0.0
Q ss_pred CcceeccccCCCccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhcc
Q 030127 68 SGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (182)
Q Consensus 68 ~g~~~~~~~~~~~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~ 141 (182)
-|.+...++.......+|+++|++ ++++++++.++++|.++|.++++..+||+|++|+|+|+||.+|+.+..
T Consensus 185 vGIvT~RD~rf~d~~~~V~evMT~--~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~~ 256 (556)
T 4af0_A 185 LGIVTGRDVQFQDAETPIKSVMTT--EVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQ 256 (556)
T ss_dssp --------------------------------------------------------------------------
T ss_pred EEEEecccccccccceEhhhhccc--ceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhhhhh
Confidence 455666666666677899999999 899999999999999999999999999999999999999999998654
No 119
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=98.31 E-value=7.2e-08 Score=86.05 Aligned_cols=63 Identities=30% Similarity=0.346 Sum_probs=0.0
Q ss_pred ccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccc
Q 030127 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (182)
Q Consensus 80 ~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~ 142 (182)
....+|+++|++.++++++++++++.++++.|.++++..+||+|++|+++|+||.+|+++...
T Consensus 158 ~~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~ 220 (503)
T 1me8_A 158 QTETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQV 220 (503)
T ss_dssp ---------------------------------------------------------------
T ss_pred cccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHHhhh
Confidence 456789999998223999999999999999999999999999999999999999999987654
No 120
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=98.29 E-value=1.2e-07 Score=84.41 Aligned_cols=74 Identities=28% Similarity=0.375 Sum_probs=0.0
Q ss_pred cceeccccC-CCccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccc
Q 030127 69 GTLTANSAA-PSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (182)
Q Consensus 69 g~~~~~~~~-~~~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~ 142 (182)
|.+...++. ......+|+++|+++++++++++++++.+++++|.++++..+||+|++|+++|+||.+|+++...
T Consensus 132 GIVt~rDl~~~~~~~~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~ 206 (490)
T 4avf_A 132 GIVTGRDLRVKPNAGDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAKT 206 (490)
T ss_dssp ---------------------------------------------------------------------------
T ss_pred EEEEhHHhhhccccCCcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhcc
Confidence 334444442 23456789999994334899999999999999999999999999999999999999999998643
No 121
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=98.14 E-value=3.1e-07 Score=81.95 Aligned_cols=75 Identities=27% Similarity=0.381 Sum_probs=50.4
Q ss_pred CcceeccccC-CCccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccc
Q 030127 68 SGTLTANSAA-PSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (182)
Q Consensus 68 ~g~~~~~~~~-~~~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~ 142 (182)
-|.+...++. ......++.++|+++++++++++++++.++++.|.++++..+||+|++|+++|+||.+|+++...
T Consensus 133 vGiVt~rDL~~~~~~~~~v~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~~~ 208 (496)
T 4fxs_A 133 VGIITGRDVRFVTDLTKSVAAVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKAES 208 (496)
T ss_dssp EEEEEHHHHTTCCCTTSBGGGTSEEGGGCCEEECC----CGGGTCC---CCCEEEECTTSBCCEEECCC-----CC
T ss_pred EEEEEHHHHhhcccCCCcHHHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHHhhc
Confidence 3445555553 23456789999994334899999999999999999999999999999999999999999997543
No 122
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.12 E-value=3.2e-07 Score=81.38 Aligned_cols=62 Identities=34% Similarity=0.541 Sum_probs=4.3
Q ss_pred cccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccc
Q 030127 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (182)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~ 142 (182)
...++.++|++.+++.++.+++++.++++.|.++++..+||+|++|+++|+||.+|+++...
T Consensus 153 ~~~~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~ 214 (494)
T 1vrd_A 153 LSKKIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIE 214 (494)
T ss_dssp --------------------------------------------------------CHHHHT
T ss_pred CCCcHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhc
Confidence 45689999986446899999999999999999999999999999999999999999997654
No 123
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=98.12 E-value=7.5e-07 Score=79.64 Aligned_cols=61 Identities=7% Similarity=0.082 Sum_probs=53.0
Q ss_pred ccccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCC----CcEEEEEeHHHHHhccccC
Q 030127 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD----WKLVGLVSDYDLLALDSIS 144 (182)
Q Consensus 80 ~~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~----g~lvGiVt~~Dll~~~~~~ 144 (182)
....+|+++|++ ++.++.+++++.+++++|.++++ +||+|++ |+++||||..||++.....
T Consensus 448 ~~~~~V~~im~~--~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g~lvGIVT~~Dll~~l~~~ 512 (527)
T 3pc3_A 448 QQSDPAIKALNK--RVIRLNESEILGKLARVLEVDPS--VLILGKNPAGKVELKALATKLDVTTFIAAG 512 (527)
T ss_dssp CTTSBGGGGEET--TCCEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCEEEEEEEEHHHHHHHHHTC
T ss_pred cCCCcHHHHhcC--CCeEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCCeEEEEEEHHHHHHHHHhc
Confidence 446789999999 99999999999999999977664 7999984 9999999999999876543
No 124
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.05 E-value=6.9e-06 Score=72.58 Aligned_cols=61 Identities=26% Similarity=0.365 Sum_probs=54.9
Q ss_pred cccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccc
Q 030127 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (182)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~ 142 (182)
...+++++|++. ++.++++++++.++++.|.++++..+||+|++|+++|+||.+|+++...
T Consensus 150 ~~~~v~~im~~~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~ 210 (491)
T 1zfj_A 150 YNAPISEHMTSE-HLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIE 210 (491)
T ss_dssp SSSBTTTSCCCS-CCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred CCCcHHHHcCCC-CCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHh
Confidence 456899999852 4788999999999999999999999999999999999999999997654
No 125
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.04 E-value=6.2e-07 Score=79.58 Aligned_cols=60 Identities=40% Similarity=0.575 Sum_probs=0.4
Q ss_pred cccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccc
Q 030127 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (182)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~ 142 (182)
...+++++|++ ++.++++++++.++++.|.++++..+||+|++|+++|+||.+|+++...
T Consensus 148 ~~~~v~~im~~--~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil~~~~ 207 (486)
T 2cu0_A 148 EGKLVKELMTK--EVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVARKK 207 (486)
T ss_dssp -------------------------------------------------------------C
T ss_pred CCCCHHHHccC--CCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHHHhhh
Confidence 45689999998 8999999999999999999999999999999999999999999998654
No 126
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=97.87 E-value=7.6e-07 Score=79.41 Aligned_cols=62 Identities=27% Similarity=0.342 Sum_probs=43.4
Q ss_pred cccccccccccCCCeEEEcCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhccc
Q 030127 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (182)
Q Consensus 81 ~~~~V~diM~~~~~~~~v~~~~tl~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~~ 142 (182)
...++.++|++..++.++.+++++.++++.|.++++..+||+|++|+++|+||.+|+++...
T Consensus 171 ~~~~v~~vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~ 232 (514)
T 1jcn_A 171 HTTLLSEVMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKNRD 232 (514)
T ss_dssp ----------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSSCCC
T ss_pred CCCCHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHHHhh
Confidence 45689999986446899999999999999999999999999999999999999999987643
No 127
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=94.15 E-value=0.042 Score=34.39 Aligned_cols=29 Identities=3% Similarity=-0.029 Sum_probs=24.9
Q ss_pred cCCCceeEeecCCCcEEEEEeHHHHHHHhh
Q 030127 148 RADNSMFPEVDSTWKVHSTRCRSCLVKPMG 177 (182)
Q Consensus 148 ~~~~~~~pVvd~~~k~~GiVt~~dil~~l~ 177 (182)
+.+...+||+++ ++++|++|..|+++.+.
T Consensus 20 ~~~~~~~pV~d~-~~l~Givt~~dl~~~~~ 48 (70)
T 3fio_A 20 RNKAGSAVVMEG-DEILGVVTERDILDKVV 48 (70)
T ss_dssp HTTCSEEEEEET-TEEEEEEEHHHHHHHTT
T ss_pred HcCCCEEEEEEC-CEEEEEEEHHHHHHHHH
Confidence 455678999997 99999999999999863
No 128
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=91.79 E-value=0.17 Score=32.53 Aligned_cols=31 Identities=3% Similarity=-0.062 Sum_probs=25.1
Q ss_pred CccCCCceeEeecCCCcEEEEEeHHHHHHHhh
Q 030127 146 SGRADNSMFPEVDSTWKVHSTRCRSCLVKPMG 177 (182)
Q Consensus 146 ~~~~~~~~~pVvd~~~k~~GiVt~~dil~~l~ 177 (182)
|.+++...+||+| +++++|++|..|+++.+.
T Consensus 18 M~~~~i~~~~V~d-~~~lvGIvT~~Di~~~~~ 48 (70)
T 3ghd_A 18 LSRNKAGSAVVME-GDEILGVVTERDILDKVV 48 (70)
T ss_dssp HHHTTCSEEEEEE-TTEEEEEEEHHHHHHHTT
T ss_pred HHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHH
Confidence 4456777899997 589999999999987653
No 129
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=58.20 E-value=14 Score=24.36 Aligned_cols=30 Identities=17% Similarity=0.261 Sum_probs=24.0
Q ss_pred CCEEEEeeCCCcEEEEEeHHHHHhccccCC
Q 030127 116 ITGFPVIDDDWKLVGLVSDYDLLALDSISG 145 (182)
Q Consensus 116 ~~~lPVvD~~g~lvGiVt~~Dll~~~~~~~ 145 (182)
...+=++|++|.-+|+++.++.++.....+
T Consensus 13 ~~eVrli~~~Ge~lGv~~~~eAl~~A~e~~ 42 (78)
T 1tif_A 13 AREVRLIDQNGDQLGIKSKQEALEIAARRN 42 (78)
T ss_dssp CSEEEEECTTSCEEEEEEHHHHHHHHHHTT
T ss_pred CCEEEEECCCCcCCCcccHHHHHHHHHHcC
Confidence 455778999999999999999987655443
No 130
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=52.38 E-value=9.7 Score=28.18 Aligned_cols=34 Identities=18% Similarity=0.425 Sum_probs=28.1
Q ss_pred HHHHHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHH
Q 030127 104 VDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138 (182)
Q Consensus 104 l~ea~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll 138 (182)
+.+.++.+.+.+...+.|.. +|+++|+|...|.+
T Consensus 121 ~~~~~~~la~~G~T~v~VA~-d~~l~GvIalaD~i 154 (156)
T 1svj_A 121 VDQKVDQVARQGATPLVVVE-GSRVLGVIALKDIV 154 (156)
T ss_dssp HHHHHHHHHHTTCEEEEEEE-TTEEEEEEEEEECC
T ss_pred HHHHHHHHHhCCCCEEEEEE-CCEEEEEEEEecCC
Confidence 67777788888888887776 69999999998854
No 131
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=42.37 E-value=19 Score=25.02 Aligned_cols=19 Identities=32% Similarity=0.326 Sum_probs=15.2
Q ss_pred EEEeeCCCcEEEEEeHHHH
Q 030127 119 FPVIDDDWKLVGLVSDYDL 137 (182)
Q Consensus 119 lPVvD~~g~lvGiVt~~Dl 137 (182)
.||.|++|+++|+|...-.
T Consensus 106 ~PV~~~~g~viGvv~vg~~ 124 (131)
T 1p0z_A 106 SPIQDATGKVIGIVSVGYT 124 (131)
T ss_dssp EEEECTTCCEEEEEEEEEE
T ss_pred EeEECCCCCEEEEEEEEEE
Confidence 5898878999999886543
No 132
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=40.63 E-value=20 Score=25.34 Aligned_cols=18 Identities=28% Similarity=0.416 Sum_probs=14.7
Q ss_pred EEEeeCCCcEEEEEeHHH
Q 030127 119 FPVIDDDWKLVGLVSDYD 136 (182)
Q Consensus 119 lPVvD~~g~lvGiVt~~D 136 (182)
.||.|++|+++|+|+..-
T Consensus 111 ~PV~~~~g~viGvv~vg~ 128 (142)
T 3by8_A 111 TPIYDENHKQIGVVAIGL 128 (142)
T ss_dssp EEEECTTSCEEEEEEEEE
T ss_pred EeEEcCCCCEEEEEEEeE
Confidence 599887899999987553
No 133
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=40.49 E-value=16 Score=28.35 Aligned_cols=21 Identities=19% Similarity=0.292 Sum_probs=17.5
Q ss_pred CCCEEEEeeCCCcEEEEEeHH
Q 030127 115 RITGFPVIDDDWKLVGLVSDY 135 (182)
Q Consensus 115 ~~~~lPVvD~~g~lvGiVt~~ 135 (182)
+-+.=|++|.+|+++||++..
T Consensus 187 G~SGGPLv~~~G~vVGI~s~~ 207 (231)
T 3tjo_A 187 GNAGGPLVNLDGEVIGINTLK 207 (231)
T ss_dssp TTTTSEEECTTSCEEEEEEEE
T ss_pred CCchhHeecCCCeEEEEEeEE
Confidence 556679999889999999854
No 134
>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}
Probab=40.13 E-value=17 Score=26.94 Aligned_cols=23 Identities=17% Similarity=0.401 Sum_probs=19.2
Q ss_pred HHcCCCEEEEeeCCCcEEEEEeH
Q 030127 112 VEKRITGFPVIDDDWKLVGLVSD 134 (182)
Q Consensus 112 ~~~~~~~lPVvD~~g~lvGiVt~ 134 (182)
...+-+.=|++|.+|+++||.+.
T Consensus 122 i~pGnSGGPl~n~~G~VVGI~~~ 144 (163)
T 2w5e_A 122 TQDGMSGAPVCDKYCRVLAVHQT 144 (163)
T ss_dssp CSSCCTTCEEECTTSCEEEEEEE
T ss_pred eCCCCchhhEEcCCCEEEEEEcc
Confidence 35577888999999999999873
No 135
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=38.21 E-value=40 Score=26.50 Aligned_cols=22 Identities=18% Similarity=0.249 Sum_probs=18.9
Q ss_pred CEEEEeeCCCcEEEEEeHHHHH
Q 030127 117 TGFPVIDDDWKLVGLVSDYDLL 138 (182)
Q Consensus 117 ~~lPVvD~~g~lvGiVt~~Dll 138 (182)
..++|+|++|+.+|.++....-
T Consensus 38 E~~~lvd~~~~~iG~~~r~~~h 59 (246)
T 2pny_A 38 EMLIVVDENDKVIGADTKRNCH 59 (246)
T ss_dssp CEEEEECTTCCEEEEEEHHHHT
T ss_pred ceEEEEcCCCCEEEEEEhHHhc
Confidence 4689999999999999998753
No 136
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=37.86 E-value=17 Score=28.19 Aligned_cols=21 Identities=14% Similarity=0.178 Sum_probs=17.9
Q ss_pred cCCCEEEEeeCCCcEEEEEeH
Q 030127 114 KRITGFPVIDDDWKLVGLVSD 134 (182)
Q Consensus 114 ~~~~~lPVvD~~g~lvGiVt~ 134 (182)
.+-+.=|++|.+|+++||++.
T Consensus 173 ~G~SGGPlv~~~G~vvGI~s~ 193 (237)
T 3lgi_A 173 HGNSGGALVNSLGELMGINTL 193 (237)
T ss_dssp TTCTTCEEECTTCCEEEEECC
T ss_pred CCCchHHeeCCCCeEEEEEee
Confidence 466777999989999999986
No 137
>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A
Probab=36.57 E-value=20 Score=27.63 Aligned_cols=22 Identities=27% Similarity=0.363 Sum_probs=18.3
Q ss_pred cCCCEEEEeeCCCcEEEEEeHH
Q 030127 114 KRITGFPVIDDDWKLVGLVSDY 135 (182)
Q Consensus 114 ~~~~~lPVvD~~g~lvGiVt~~ 135 (182)
.+-+.=|++|.+|+++||++..
T Consensus 180 ~GdSGGPLv~~~G~vvGI~s~~ 201 (237)
T 3k6y_A 180 QGDSGGPLIDLNGQVLGVVFGA 201 (237)
T ss_dssp TTCTTCEEECTTSCEEEEEEEE
T ss_pred CCccHHHEECCCCEEEEEEEee
Confidence 4667789999889999998764
No 138
>4dah_A Sporulation kinase D; alpha-beta-alpha structure, structural genomics, midwest CEN structural genomics (MCSG), PSI-biology, PAS-like fold; 2.03A {Bacillus subtilis} PDB: 4dbj_A 4dbi_A 4dak_A 3fos_A
Probab=36.35 E-value=54 Score=24.06 Aligned_cols=43 Identities=19% Similarity=0.157 Sum_probs=22.9
Q ss_pred EEEeeCCCcEEEEEe----HHHHHhccccCCCccCCCceeEeecCCCcEEE
Q 030127 119 FPVIDDDWKLVGLVS----DYDLLALDSISGSGRADNSMFPEVDSTWKVHS 165 (182)
Q Consensus 119 lPVvD~~g~lvGiVt----~~Dll~~~~~~~~~~~~~~~~pVvd~~~k~~G 165 (182)
.||.+.+|+++|++. ...+......... + ..+-++|++|+++-
T Consensus 130 ~pi~~~~g~~~Gvl~~~i~l~~l~~~~~~~~~---g-g~~~l~d~~G~ii~ 176 (217)
T 4dah_A 130 VPVLDSKRNVTDYLVAAIQIDYLKNLINLLSP---D-VYIEVVNQDGKMIF 176 (217)
T ss_dssp EEEECTTSCEEEEEEEEEEHHHHHHHHHHHCT---T-SCEEEEETTSCEEE
T ss_pred EEEECCCCCEEEEEEEEEcHHHHHHHHHhcCC---C-cEEEEEcCCCCEEE
Confidence 577776777777754 4444333221111 1 34556777776553
No 139
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=35.91 E-value=46 Score=25.86 Aligned_cols=22 Identities=14% Similarity=0.111 Sum_probs=18.8
Q ss_pred CEEEEeeCCCcEEEEEeHHHHH
Q 030127 117 TGFPVIDDDWKLVGLVSDYDLL 138 (182)
Q Consensus 117 ~~lPVvD~~g~lvGiVt~~Dll 138 (182)
..++|+|++|+.+|.++..+.-
T Consensus 27 E~~~lvd~~~~~~G~~~r~~~h 48 (235)
T 2dho_A 27 EMCILIDENDNKIGAETKKNCH 48 (235)
T ss_dssp CEEEEECTTCCEEEEEEHHHHT
T ss_pred cEEEEEcCCCCEEEEEEhHHhc
Confidence 4589999999999999998753
No 140
>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}
Probab=35.50 E-value=21 Score=28.15 Aligned_cols=22 Identities=14% Similarity=0.291 Sum_probs=18.2
Q ss_pred cCCCEEEEeeCCCcEEEEEeHH
Q 030127 114 KRITGFPVIDDDWKLVGLVSDY 135 (182)
Q Consensus 114 ~~~~~lPVvD~~g~lvGiVt~~ 135 (182)
.+-+.=|++|.+|+++||++..
T Consensus 184 ~G~SGGPLvn~~G~vVGI~s~~ 205 (245)
T 3sti_A 184 RGNSGGALLNLNGELIGINTAI 205 (245)
T ss_dssp TTTTTSEEECTTSCEEEEEECC
T ss_pred CCcchhHeecCCCeEEEEEEeE
Confidence 4667779999899999998853
No 141
>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}
Probab=35.31 E-value=19 Score=27.13 Aligned_cols=22 Identities=23% Similarity=0.427 Sum_probs=18.3
Q ss_pred cCCCEEEEeeCCCcEEEEEeHH
Q 030127 114 KRITGFPVIDDDWKLVGLVSDY 135 (182)
Q Consensus 114 ~~~~~lPVvD~~g~lvGiVt~~ 135 (182)
.+-+.=|+++.+|+++||++..
T Consensus 155 ~GdSGGPlv~~~g~lvGI~s~g 176 (210)
T 2as9_A 155 PGNSGSPVLNSNNEVIGVVYGG 176 (210)
T ss_dssp TTCTTCEEECTTSCEEEEECCS
T ss_pred CCCccCcEECCCCeEEEEEecc
Confidence 4667779999789999999974
No 142
>2qkp_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.75A {Streptococcus mutans}
Probab=34.65 E-value=21 Score=25.64 Aligned_cols=22 Identities=23% Similarity=0.247 Sum_probs=16.2
Q ss_pred CCEEEEeeCCCcEEEEEe-HHHH
Q 030127 116 ITGFPVIDDDWKLVGLVS-DYDL 137 (182)
Q Consensus 116 ~~~lPVvD~~g~lvGiVt-~~Dl 137 (182)
+...||.|++|+++|+|. ..|+
T Consensus 108 v~~~Pi~d~~G~~~G~vev~~Di 130 (151)
T 2qkp_A 108 VTYAAVRDQAGDFQGVLEYVQDI 130 (151)
T ss_dssp EEEEEEECTTCCEEEEEEEEEEC
T ss_pred EEEEEEECCCCCEEEEEEEEEEC
Confidence 456799998899999874 3344
No 143
>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A
Probab=34.13 E-value=23 Score=26.18 Aligned_cols=22 Identities=23% Similarity=0.462 Sum_probs=18.3
Q ss_pred cCCCEEEEeeCCCcEEEEEeHH
Q 030127 114 KRITGFPVIDDDWKLVGLVSDY 135 (182)
Q Consensus 114 ~~~~~lPVvD~~g~lvGiVt~~ 135 (182)
.+-+.=|+++.+|+++||++..
T Consensus 151 ~GdSGGPl~~~~g~lvGI~s~g 172 (200)
T 2w7s_A 151 PGNSGSPVLNSKHELIGILYAG 172 (200)
T ss_dssp TTCTTCEEECTTSCEEEEEEEE
T ss_pred CCCccCeEECcCCEEEEEEecc
Confidence 4667779998789999999975
No 144
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=34.09 E-value=21 Score=28.04 Aligned_cols=26 Identities=27% Similarity=0.319 Sum_probs=19.0
Q ss_pred cCCCEEEEeeCCCcEEEEEeHHHHHh
Q 030127 114 KRITGFPVIDDDWKLVGLVSDYDLLA 139 (182)
Q Consensus 114 ~~~~~lPVvD~~g~lvGiVt~~Dll~ 139 (182)
-+-+.=||+|.+|+++||-+..|=..
T Consensus 124 pGdSGsPVvn~dG~VIGVHt~s~~~g 149 (213)
T 3fan_A 124 CGDSGSPVITEAGELVGVHTGSNKQG 149 (213)
T ss_dssp CCSTTCEEEETTSCEEEEEEC-----
T ss_pred CCCCCCccCCCCCcEEEEEeccCCcc
Confidence 47777899999999999999888654
No 145
>3lif_A Putative diguanylate cyclase (ggdef) with PAS/PAC; PDC fold, signaling protein; HET: CIT; 2.70A {Rhodopseudomonas palustris}
Probab=32.16 E-value=1.1e+02 Score=22.89 Aligned_cols=46 Identities=11% Similarity=0.003 Sum_probs=26.1
Q ss_pred EEEeeCCCcEEEEEe----HHHHHhccccCCCccCCCceeEeecCCCcEEEE
Q 030127 119 FPVIDDDWKLVGLVS----DYDLLALDSISGSGRADNSMFPEVDSTWKVHST 166 (182)
Q Consensus 119 lPVvD~~g~lvGiVt----~~Dll~~~~~~~~~~~~~~~~pVvd~~~k~~Gi 166 (182)
.||.+.+|+++|++. ...+....... ...+...+-++|++|.++.-
T Consensus 132 ~pi~~~~g~~~Gvl~~~i~l~~l~~~~~~~--~~~~~g~~~l~d~~G~ii~~ 181 (254)
T 3lif_A 132 RRLETTDGKFFGVVVATIESEYFSTFYKTF--DLGPGGSISLLHSDGRLLIQ 181 (254)
T ss_dssp EEEECTTCCEEEEEEEEECHHHHHHHHTTS--CCCTTCEEEEEETTSBEEEE
T ss_pred eeeeCCCCCEeEEEEEEECHHHHHHHHHhc--CcCCCcEEEEEeCCCcEEEE
Confidence 577787788888754 44444433222 22233355567777776654
No 146
>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}
Probab=31.93 E-value=27 Score=25.73 Aligned_cols=21 Identities=29% Similarity=0.439 Sum_probs=17.3
Q ss_pred CCCEEEEeeCCCcEEEEEeHH
Q 030127 115 RITGFPVIDDDWKLVGLVSDY 135 (182)
Q Consensus 115 ~~~~lPVvD~~g~lvGiVt~~ 135 (182)
+-+.=|+++.+|+++||++..
T Consensus 155 GdSGGPl~~~~g~lvGI~s~g 175 (204)
T 2vid_A 155 GNSGSPVLNSNNELVGIHFAS 175 (204)
T ss_dssp GGTTCEEECTTSCEEEEEEEE
T ss_pred CCccCcEECCCCeEEEEEecC
Confidence 456679999889999999875
No 147
>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A
Probab=30.35 E-value=29 Score=26.83 Aligned_cols=22 Identities=18% Similarity=0.197 Sum_probs=17.9
Q ss_pred cCCCEEEEeeCCCcEEEEEeHH
Q 030127 114 KRITGFPVIDDDWKLVGLVSDY 135 (182)
Q Consensus 114 ~~~~~lPVvD~~g~lvGiVt~~ 135 (182)
.+-+.=|+++.+|+++||++..
T Consensus 183 ~GdSGGPlv~~~g~lvGI~s~g 204 (246)
T 1qtf_A 183 VGNSGSGIFNLKGELIGIHSGK 204 (246)
T ss_dssp GGGTTCEEECTTCCEEEEEEEE
T ss_pred CCCchhheECCCCEEEEEEecc
Confidence 3456679998889999999975
No 148
>3k2t_A LMO2511 protein; listeria monocytogenes,binding, structural genomics, PSI-2, protein structure initiative; 2.40A {Listeria monocytogenes}
Probab=28.47 E-value=96 Score=18.92 Aligned_cols=26 Identities=12% Similarity=0.018 Sum_probs=22.1
Q ss_pred CCCCHHHHHHHHHHcCCCEEEEeeCC
Q 030127 100 PTTTVDEALEILVEKRITGFPVIDDD 125 (182)
Q Consensus 100 ~~~tl~ea~~~m~~~~~~~lPVvD~~ 125 (182)
+-.+++||+..|.-.++..+.-.|.+
T Consensus 11 kpmsveEAv~qmel~gh~F~vF~n~~ 36 (57)
T 3k2t_A 11 KPMDSEEAVLQMNLLGHSFYVYTDAE 36 (57)
T ss_dssp CCBCHHHHHHHHHHHTCSEEEEEBSS
T ss_pred CCCCHHHHHHHHHhCCCcEEEEEcCC
Confidence 34899999999999999888877866
No 149
>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A
Probab=26.93 E-value=35 Score=26.08 Aligned_cols=22 Identities=23% Similarity=0.318 Sum_probs=17.6
Q ss_pred cCCCEEEEeeCCCcEEEEEeHH
Q 030127 114 KRITGFPVIDDDWKLVGLVSDY 135 (182)
Q Consensus 114 ~~~~~lPVvD~~g~lvGiVt~~ 135 (182)
.+-+.=|+++.+|+++||++..
T Consensus 192 ~GdSGGPl~~~~g~lvGI~s~g 213 (242)
T 1agj_A 192 PGNSGSGIFNSNGELVGIHSSK 213 (242)
T ss_dssp GGGTTCEEECTTSEEEEEEEEE
T ss_pred CCCCchHhcccCCEEEEEEecc
Confidence 3456679998789999999974
No 150
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=26.51 E-value=36 Score=27.67 Aligned_cols=20 Identities=20% Similarity=0.341 Sum_probs=17.0
Q ss_pred CCCEEEEeeCCCcEEEEEeH
Q 030127 115 RITGFPVIDDDWKLVGLVSD 134 (182)
Q Consensus 115 ~~~~lPVvD~~g~lvGiVt~ 134 (182)
+-+.=|++|.+|+++||++.
T Consensus 170 G~SGGPlv~~~G~vvGI~s~ 189 (332)
T 3num_A 170 GNAGGPLVNLDGEVIGINTL 189 (332)
T ss_dssp TTTTSEEEETTSCEEEEEEE
T ss_pred CCcHHHhhCCCCcEEEEEee
Confidence 55667999988999999985
No 151
>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1
Probab=26.44 E-value=32 Score=26.78 Aligned_cols=22 Identities=14% Similarity=0.294 Sum_probs=18.0
Q ss_pred cCCCEEEEeeCCCcEEEEEeHH
Q 030127 114 KRITGFPVIDDDWKLVGLVSDY 135 (182)
Q Consensus 114 ~~~~~lPVvD~~g~lvGiVt~~ 135 (182)
.+-+.=|++|.+|+++||++..
T Consensus 180 ~G~SGGPLv~~~G~vvGI~s~~ 201 (239)
T 1l1j_A 180 PGNSGGPLLNIHGEVIGINTAI 201 (239)
T ss_dssp TTTTTSEEECSSSEEEEEECCC
T ss_pred CCCccHHhccCCCeEEEEEeee
Confidence 4556679999889999999864
No 152
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=25.16 E-value=40 Score=27.40 Aligned_cols=22 Identities=18% Similarity=0.229 Sum_probs=18.1
Q ss_pred cCCCEEEEeeCCCcEEEEEeHH
Q 030127 114 KRITGFPVIDDDWKLVGLVSDY 135 (182)
Q Consensus 114 ~~~~~lPVvD~~g~lvGiVt~~ 135 (182)
.+-+.=|++|.+|+++||++..
T Consensus 170 ~G~SGGPl~~~~G~vVGI~s~~ 191 (325)
T 1lcy_A 170 FGNAGGPLVNLDGEVIGVNTMK 191 (325)
T ss_dssp TTTTTSEEEETTSCEEEEEEEE
T ss_pred CCCccccEECCCCEEEEEEeEe
Confidence 4566779999899999998854
No 153
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=24.74 E-value=45 Score=20.29 Aligned_cols=35 Identities=17% Similarity=-0.003 Sum_probs=22.5
Q ss_pred HHHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHhcc
Q 030127 107 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (182)
Q Consensus 107 a~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~~~ 141 (182)
..+.+.+.++..+|++-.+|+.+|-.+..+|....
T Consensus 39 ~~~~~~~~g~~~vP~~~~~g~~~~g~~~~~l~~~l 73 (81)
T 1h75_A 39 AAEALRAQGFRQLPVVIAGDLSWSGFRPDMINRLH 73 (81)
T ss_dssp HHHHHHHTTCCSSCEEEETTEEEESCCHHHHGGGS
T ss_pred HHHHHHHhCCCccCEEEECCEEEecCCHHHHHHHH
Confidence 34455567888888775567777666666665543
No 154
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=23.96 E-value=42 Score=27.58 Aligned_cols=21 Identities=24% Similarity=0.445 Sum_probs=17.7
Q ss_pred cCCCEEEEeeCCCcEEEEEeH
Q 030127 114 KRITGFPVIDDDWKLVGLVSD 134 (182)
Q Consensus 114 ~~~~~lPVvD~~g~lvGiVt~ 134 (182)
.+-+.=|++|.+|+++||++.
T Consensus 177 ~G~SGGPLvn~~G~vvGI~s~ 197 (348)
T 3qo6_A 177 PGNSGGPLLDSSGTLIGINTA 197 (348)
T ss_dssp TTCTTCEEECTTSCEEEEEEE
T ss_pred CCCcHHHhhCCCCeEEEEEEe
Confidence 366777999989999999885
No 155
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=23.92 E-value=43 Score=27.03 Aligned_cols=22 Identities=14% Similarity=0.141 Sum_probs=17.9
Q ss_pred cCCCEEEEeeCCCcEEEEEeHH
Q 030127 114 KRITGFPVIDDDWKLVGLVSDY 135 (182)
Q Consensus 114 ~~~~~lPVvD~~g~lvGiVt~~ 135 (182)
.+-+.=|++|.+|+++||++..
T Consensus 162 ~G~SGGPl~~~~G~vvGI~s~~ 183 (318)
T 1te0_A 162 HGNSGGALVNSLGELMGINTLS 183 (318)
T ss_dssp TTTTTSEEECTTCCEEEEEECC
T ss_pred CCCCcCceECCCCeEEEEEeee
Confidence 4566779999899999999753
No 156
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=22.81 E-value=45 Score=27.49 Aligned_cols=21 Identities=14% Similarity=0.316 Sum_probs=17.5
Q ss_pred cCCCEEEEeeCCCcEEEEEeH
Q 030127 114 KRITGFPVIDDDWKLVGLVSD 134 (182)
Q Consensus 114 ~~~~~lPVvD~~g~lvGiVt~ 134 (182)
.+-+.=|++|.+|+++||.+.
T Consensus 184 ~GnSGGPLvn~~G~vVGI~s~ 204 (345)
T 3stj_A 184 RGNSGGALLNLNGELIGINTA 204 (345)
T ss_dssp TTCTTCEEECTTSCEEEEEEE
T ss_pred CCcCccceeCCCCEEEEEEec
Confidence 456677999999999999874
No 157
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=22.33 E-value=51 Score=19.52 Aligned_cols=32 Identities=9% Similarity=0.004 Sum_probs=17.6
Q ss_pred HHHHHHcCCCEEEEeeCCCcEEEEEeHHHHHh
Q 030127 108 LEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 139 (182)
Q Consensus 108 ~~~m~~~~~~~lPVvD~~g~lvGiVt~~Dll~ 139 (182)
.+.+.+.++..+|++-.+|+.+|=.+..++.+
T Consensus 40 ~~~~~~~~~~~vP~l~~~g~~~~g~~~~~l~~ 71 (75)
T 1r7h_A 40 RDYVMALGYVQAPVVEVDGEHWSGFRPERIKQ 71 (75)
T ss_dssp HHHHHHTTCBCCCEEEETTEEEESCCHHHHHH
T ss_pred HHHHHHcCCCccCEEEECCeEEcCCCHHHHHH
Confidence 33445567777776644566554445554443
No 158
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=22.21 E-value=47 Score=26.78 Aligned_cols=21 Identities=24% Similarity=0.295 Sum_probs=17.6
Q ss_pred cCCCEEEEeeCCCcEEEEEeH
Q 030127 114 KRITGFPVIDDDWKLVGLVSD 134 (182)
Q Consensus 114 ~~~~~lPVvD~~g~lvGiVt~ 134 (182)
.+-+.=|++|.+|+++||++.
T Consensus 166 ~G~SGGPlv~~~G~vvGI~s~ 186 (324)
T 1y8t_A 166 PGNSGGALVNMNAQLVGVNSA 186 (324)
T ss_dssp TTCTTEEEECTTSEEEEEEEE
T ss_pred CCCccCcEECCCCeEEEEEee
Confidence 456677999988999999885
No 159
>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A
Probab=20.79 E-value=54 Score=25.84 Aligned_cols=22 Identities=18% Similarity=0.312 Sum_probs=18.0
Q ss_pred cCCCEEEEeeCCCcEEEEEeHH
Q 030127 114 KRITGFPVIDDDWKLVGLVSDY 135 (182)
Q Consensus 114 ~~~~~lPVvD~~g~lvGiVt~~ 135 (182)
.|-+.=|+++.+|+++||++..
T Consensus 166 ~GdSGGPLv~~~g~lvGIvS~G 187 (274)
T 2o8l_A 166 GGNSGSPVFNEKNEVIGIHWGG 187 (274)
T ss_dssp TTCTTCEEECTTSCEEEEEEEE
T ss_pred CCCchhheeccCCeEEEEEeCc
Confidence 3566779998789999999874
No 160
>2eui_A Probable acetyltransferase; dimer, structural genomics, PSI, protein structure initiative; 2.80A {Pseudomonas aeruginosa PAO1} SCOP: d.108.1.1
Probab=20.49 E-value=1.8e+02 Score=18.71 Aligned_cols=23 Identities=13% Similarity=0.212 Sum_probs=15.6
Q ss_pred HcCCCEEEEeeC--CCcEEEEEeHH
Q 030127 113 EKRITGFPVIDD--DWKLVGLVSDY 135 (182)
Q Consensus 113 ~~~~~~lPVvD~--~g~lvGiVt~~ 135 (182)
..+...+.|+.+ +|+++|++...
T Consensus 43 ~~~~~~~~v~~~~~~~~~vG~~~~~ 67 (153)
T 2eui_A 43 RRKESVIYLALADEEDRLLGFCQLY 67 (153)
T ss_dssp HHTCSEEEEEECSSSCCEEEEEEEE
T ss_pred cCCCCeEEEEEecCCCcEEEEEEEE
Confidence 334445556665 79999999874
No 161
>4agk_A Capsid protein, coat protein, C; hydrolase, viral protein; 1.81A {Aura virus} PDB: 4agj_A 1kxa_A 2snw_A 1svp_A 1kxb_A 1kxc_A 1kxd_A 1kxe_A 2snv_A 1z8y_Q 1wyk_A
Probab=20.30 E-value=59 Score=23.72 Aligned_cols=20 Identities=30% Similarity=0.491 Sum_probs=16.4
Q ss_pred cCCCEEEEeeCCCcEEEEEe
Q 030127 114 KRITGFPVIDDDWKLVGLVS 133 (182)
Q Consensus 114 ~~~~~lPVvD~~g~lvGiVt 133 (182)
.+-+.-|++|+.|++++||-
T Consensus 106 ~GdSGrPi~Dn~GrVVaIVl 125 (158)
T 4agk_A 106 PGDSGRPILDNSGKVVAIVL 125 (158)
T ss_dssp TTCTTCEEECTTSCEEEEEE
T ss_pred CCCCCCccccCCCCEEEEEe
Confidence 45566799999999999984
No 162
>3t9y_A Acetyltransferase, GNAT family; PSI-biology, structural genomics, midwest center for structu genomics, MCSG; HET: PGE; 2.00A {Staphylococcus aureus}
Probab=20.00 E-value=1.3e+02 Score=19.56 Aligned_cols=22 Identities=14% Similarity=0.078 Sum_probs=15.3
Q ss_pred CCCEEEEeeCCCcEEEEEeHHH
Q 030127 115 RITGFPVIDDDWKLVGLVSDYD 136 (182)
Q Consensus 115 ~~~~lPVvD~~g~lvGiVt~~D 136 (182)
....+.|...+|+++|.+....
T Consensus 49 ~~~~~~v~~~~~~~vG~~~~~~ 70 (150)
T 3t9y_A 49 DDYFLLLLIKENKIIGLSGMCK 70 (150)
T ss_dssp TTEEEEEEEETTEEEEEEEEEE
T ss_pred CceEEEEEEECCEEEEEEEEEE
Confidence 4445556666899999996643
Done!