BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030130
(182 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6YYB0|Y8359_ORYSJ Uncharacterized protein Os08g0359500 OS=Oryza sativa subsp.
japonica GN=Os08g0359500 PE=2 SV=1
Length = 213
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/128 (58%), Positives = 95/128 (74%), Gaps = 1/128 (0%)
Query: 1 MSRHPTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDK 60
MSRHP VKWAQR D+VYIT+ L DA+D K+ LEPEG F FSAT+G D YE ++L DK
Sbjct: 1 MSRHPEVKWAQRIDKVYITVQLADAKDAKVNLEPEGVFSFSATAGTDGNLYESKLELNDK 60
Query: 61 VDVNESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDDKP 120
V+V ESK SVG+R+I +V+KAE KWW +L++ K P F+KVDWDKW+DED++G D
Sbjct: 61 VNVEESKISVGVRSIFCIVEKAEAKWWKKLVRDDQKAPHFVKVDWDKWVDEDDDGADVNV 120
Query: 121 D-MDFGDL 127
D MDF +
Sbjct: 121 DGMDFSNF 128
>sp|P0C8Z0|Y8359_ORYSI Uncharacterized protein OsI_027940 OS=Oryza sativa subsp. indica
GN=OsI_027940 PE=1 SV=2
Length = 210
Score = 154 bits (390), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/128 (58%), Positives = 95/128 (74%), Gaps = 1/128 (0%)
Query: 1 MSRHPTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDK 60
MSRHP VKWAQR D+VYIT+ L DA+D K+ LEPEG F FSAT+G D YE ++L DK
Sbjct: 1 MSRHPEVKWAQRIDKVYITVQLADAKDAKVNLEPEGVFSFSATAGTDGNLYESKLELNDK 60
Query: 61 VDVNESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDDKP 120
V+V ESK SVG+R+I +V+KAE KWW +L++ K P F+KVDWDKW+DED++G D
Sbjct: 61 VNVEESKISVGVRSIFCIVEKAEAKWWKKLVRDDQKAPHFVKVDWDKWVDEDDDGADVNV 120
Query: 121 D-MDFGDL 127
D MDF +
Sbjct: 121 DGMDFSNF 128
>sp|Q6ID70|Y3377_ARATH Uncharacterized protein At3g03773 OS=Arabidopsis thaliana
GN=At3g03773 PE=1 SV=1
Length = 150
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/114 (51%), Positives = 82/114 (71%), Gaps = 2/114 (1%)
Query: 1 MSRHPTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDK 60
MSR+P V WAQR+D+VY+T+ LPDA+D+ +K EP+G F FSA G +E ++LY K
Sbjct: 1 MSRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPQGLFSFSAL-GAQGERFEFSLELYGK 59
Query: 61 VDVNESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDEDEE 114
+ + E + +VGLRNI + ++K E WW+RLLK KP ++KVDW+KW DEDEE
Sbjct: 60 I-MTEYRKNVGLRNIIFSIQKEERSWWTRLLKSEEKPAPYIKVDWNKWCDEDEE 112
>sp|Q11118|WOS2_SCHPO Protein wos2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=wos2 PE=2 SV=1
Length = 186
Score = 80.1 bits (196), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 90/169 (53%), Gaps = 27/169 (15%)
Query: 2 SRHPTVKWAQRTDR-------VYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVD 54
++ P V WAQR+++ +Y+T+ +PDA D K+ L PE K + SG + Y V
Sbjct: 5 TQIPEVLWAQRSNKDDAEKNVIYLTVLIPDAVDPKINLTPE-KLVIDSKSGANA-HYAVQ 62
Query: 55 IDLYDKVDVNESKASVGLRNIHYLVKKAE--NKWWSRLLKQAGKPPVFLKVDWDKWIDED 112
ID + +DV +SK SV R I +++ K E ++W RL K+ + +L+ D+D+W+DED
Sbjct: 63 IDFFKDIDVEKSKYSVTGRYIFFVLYKKELQEEFWPRLTKEKLRLH-WLRTDFDRWVDED 121
Query: 113 EE---------GKDDKPDMD----FGDLDFSKMNMGGLDAEAAGGDEND 148
E+ G PD+ G +DFS+ G L AG D +D
Sbjct: 122 EQEAQPEVSPFGAGGMPDLSALGGMGGMDFSQ--FGNLGGAGAGEDASD 168
>sp|Q23280|YOCA_CAEEL Uncharacterized protein ZC395.10 OS=Caenorhabditis elegans
GN=ZC395.10 PE=3 SV=1
Length = 175
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 64/111 (57%), Gaps = 9/111 (8%)
Query: 1 MSRHPTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDK 60
M++ PTV WAQR VY+TI++ +A+ +LK E K F +S DK YE ++ +D+
Sbjct: 1 MAKQPTVLWAQRESLVYLTIEVDEAKIEELKGEG-NKLHFQGSSKTDK--YEATLEFFDE 57
Query: 61 VD---VNESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKW 108
+D V + +S R + V+K WW RLL+ GK +LKVD+ KW
Sbjct: 58 IDPASVKHTGSST--RVVEITVQKKTPAWWPRLLQNKGKVH-WLKVDFGKW 105
>sp|Q5NVM4|TEBP_PONAB Prostaglandin E synthase 3 OS=Pongo abelii GN=PTGES3 PE=2 SV=1
Length = 160
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 9/134 (6%)
Query: 6 TVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDKVDVNE 65
+ KW R D V+I + D++DV + E + K FS G D + +IDL+ +D N+
Sbjct: 5 SAKWYDRRDYVFIEFCVEDSKDVNVNFE-KSKLTFSCLGGSDNFKHLNEIDLFHCIDPND 63
Query: 66 SKASVGLRNIHYLVKKAEN-KWWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDDKPDMDF 124
SK R+I ++K E+ + W RL K+ K +L VD++ W D +++ +D + D
Sbjct: 64 SKHKRTDRSILCCLRKGESGQSWPRLTKERAKLN-WLSVDFNNWKDWEDDSDEDMSNFD- 121
Query: 125 GDLDFSKM--NMGG 136
FS+M NMGG
Sbjct: 122 ---RFSEMMNNMGG 132
>sp|Q6PWL5|TEBP_MACFA Prostaglandin E synthase 3 OS=Macaca fascicularis GN=PTGES3 PE=1
SV=1
Length = 160
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 9/134 (6%)
Query: 6 TVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDKVDVNE 65
+ KW R D V+I + D++DV + E + K FS G D + +IDL+ +D N+
Sbjct: 5 SAKWYDRRDYVFIEFCVEDSKDVNVNFE-KSKLTFSCLGGSDNFKHLNEIDLFHCIDPND 63
Query: 66 SKASVGLRNIHYLVKKAEN-KWWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDDKPDMDF 124
SK R+I ++K E+ + W RL K+ K +L VD++ W D +++ +D + D
Sbjct: 64 SKHKRTDRSILCCLRKGESGQSWPRLTKERAKLN-WLSVDFNNWKDWEDDSDEDMSNFD- 121
Query: 125 GDLDFSKM--NMGG 136
FS+M NMGG
Sbjct: 122 ---RFSEMMNNMGG 132
>sp|Q15185|TEBP_HUMAN Prostaglandin E synthase 3 OS=Homo sapiens GN=PTGES3 PE=1 SV=1
Length = 160
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 9/134 (6%)
Query: 6 TVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDKVDVNE 65
+ KW R D V+I + D++DV + E + K FS G D + +IDL+ +D N+
Sbjct: 5 SAKWYDRRDYVFIEFCVEDSKDVNVNFE-KSKLTFSCLGGSDNFKHLNEIDLFHCIDPND 63
Query: 66 SKASVGLRNIHYLVKKAEN-KWWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDDKPDMDF 124
SK R+I ++K E+ + W RL K+ K +L VD++ W D +++ +D + D
Sbjct: 64 SKHKRTDRSILCCLRKGESGQSWPRLTKERAKLN-WLSVDFNNWKDWEDDSDEDMSNFD- 121
Query: 125 GDLDFSKM--NMGG 136
FS+M NMGG
Sbjct: 122 ---RFSEMMNNMGG 132
>sp|Q3ZBF7|TEBP_BOVIN Prostaglandin E synthase 3 OS=Bos taurus GN=PTGES3 PE=1 SV=1
Length = 160
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 9/134 (6%)
Query: 6 TVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDKVDVNE 65
+ KW R D V+I + D++DV + E + K FS G D + +IDL+ +D N+
Sbjct: 5 SAKWYDRRDYVFIEFCVEDSKDVNVNFE-KSKLTFSCLGGSDNFKHLNEIDLFHCIDPND 63
Query: 66 SKASVGLRNIHYLVKKAEN-KWWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDDKPDMDF 124
SK R+I ++K E+ + W RL K+ K +L VD++ W D +++ +D + D
Sbjct: 64 SKHKRTDRSILCCLRKGESGQSWPRLTKERAKLN-WLSVDFNNWKDWEDDSDEDMSNFD- 121
Query: 125 GDLDFSKM--NMGG 136
FS+M NMGG
Sbjct: 122 ---RFSEMMNNMGG 132
>sp|P83868|TEBP_RAT Prostaglandin E synthase 3 OS=Rattus norvegicus GN=Ptges3 PE=1 SV=2
Length = 160
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 9/134 (6%)
Query: 6 TVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDKVDVNE 65
+ KW R D V+I + D++DV + E + K FS G D + +IDL+ +D N+
Sbjct: 5 SAKWYDRRDYVFIEFCVEDSKDVNVNFE-KSKLTFSCLGGSDNFKHLNEIDLFHCIDPND 63
Query: 66 SKASVGLRNIHYLVKKAEN-KWWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDDKPDMDF 124
SK R+I ++K E+ + W RL K+ K +L VD++ W D +++ +D + D
Sbjct: 64 SKHKRTDRSILCCLRKGESGQSWPRLTKERAKLN-WLSVDFNNWKDWEDDSDEDMSNFD- 121
Query: 125 GDLDFSKM--NMGG 136
FS+M +MGG
Sbjct: 122 ---RFSEMMDHMGG 132
>sp|Q9R0Q7|TEBP_MOUSE Prostaglandin E synthase 3 OS=Mus musculus GN=Ptges3 PE=1 SV=1
Length = 160
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 9/134 (6%)
Query: 6 TVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDKVDVNE 65
+ KW R D V+I + D++DV + E + K FS G D + +IDL+ +D N+
Sbjct: 5 SAKWYDRRDYVFIEFCVEDSKDVNVNFE-KSKLTFSCLGGSDNFKHLNEIDLFHCIDPND 63
Query: 66 SKASVGLRNIHYLVKKAEN-KWWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDDKPDMDF 124
SK R+I ++K E+ + W RL K+ K +L VD++ W D +++ +D + D
Sbjct: 64 SKHKRTDRSILCCLRKGESGQSWPRLTKERAKLN-WLSVDFNNWKDWEDDSDEDMSNFD- 121
Query: 125 GDLDFSKM--NMGG 136
FS+M +MGG
Sbjct: 122 ---RFSEMMDHMGG 132
>sp|Q90955|TEBP_CHICK Prostaglandin E synthase 3 (Fragment) OS=Gallus gallus GN=PTGES3
PE=1 SV=1
Length = 146
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 68/124 (54%), Gaps = 9/124 (7%)
Query: 16 VYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDKVDVNESKASVGLRNI 75
V+I + D++DV + E + K FS G D + +IDL++ +D NESK R+I
Sbjct: 1 VFIEFCVEDSKDVNVNFE-KSKLTFSCLGGSDNFKHLNEIDLFNNIDPNESKHKRTDRSI 59
Query: 76 HYLVKKAEN-KWWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDDKPDMDFGDLDFSKM-- 132
++K E+ + W RL K+ K +L VD++ W D +++ +D + D FS+M
Sbjct: 60 LCCLRKGESGQAWPRLTKERAKLN-WLSVDFNNWKDWEDDSDEDMSNFD----RFSEMMN 114
Query: 133 NMGG 136
NMGG
Sbjct: 115 NMGG 118
>sp|P28707|SBA1_YEAST Co-chaperone protein SBA1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SBA1 PE=1 SV=3
Length = 216
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 25/143 (17%)
Query: 5 PTVKWAQRT-------DRVYITIDLPDAQDVKLKLEPEGKFFFSATSGP-----DKIPYE 52
P V WAQR+ + V IT+ + D +L ++P A S P + Y+
Sbjct: 8 PQVAWAQRSSTTDPERNYVLITVSIADCDAPELTIKP-SYIELKAQSKPHVGDENVHHYQ 66
Query: 53 VDIDLYDKVDVNESKASVGLRNIHYLVK----KAENKWWSRLLKQAGKPPVFLKVDWDKW 108
+ IDLY ++ ++ V HY +K E+++W RL K+ K P ++K D+DKW
Sbjct: 67 LHIDLYKEIIPEKTMHKVA-NGQHYFLKLYKKDLESEYWPRLTKEKVKYP-YIKTDFDKW 124
Query: 109 IDEDE------EGKDDKPDMDFG 125
+DEDE EG D MDF
Sbjct: 125 VDEDEQDEVEAEGNDAAQGMDFS 147
>sp|Q7SY06|HADC_DANRE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase OS=Danio rerio GN=ptplad1 PE=2 SV=2
Length = 359
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Query: 5 PTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPD-KIPYEVDIDLYDKVDV 63
P V WAQR +Y+ +++ DAQD+ + +E F G + YE ++ V
Sbjct: 6 PHVYWAQRHGEIYLRVEISDAQDLSIGVEENILQFRGQGHGAKGENEYEFSLEFLKPVK- 64
Query: 64 NESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDED 112
E K R ++ V+K E WW+RL KQ K P+FL D+D+W+DE
Sbjct: 65 PEVKHKSTQRQVNITVRKQEEVWWNRLTKQE-KKPLFLAPDFDRWLDES 112
>sp|A7YY55|HACD3_BOVIN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Bos taurus GN=PTPLAD1 PE=2 SV=1
Length = 362
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 5 PTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGP--DKIPYEVDIDLYDKVD 62
P V WAQR +Y+ ++L D Q+ + + F + G D + YE ++ D V
Sbjct: 8 PHVYWAQRHHELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNV-YEFHLEFLDLVK 66
Query: 63 VNESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDED 112
E + R ++ V+K E++WW RL KQ K P+FL D+D+W+DE
Sbjct: 67 -PEPVYKLTQRQVNITVQKKESQWWERLTKQE-KRPLFLAPDFDRWLDES 114
>sp|Q5ZM57|HACD_CHICK Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase OS=Gallus gallus GN=PTPLAD1 PE=2 SV=1
Length = 362
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 15/118 (12%)
Query: 2 SRHPTVKWAQRTDRVYITIDLPDAQ-------DVKLKLEPEGKFFFSATSGPDKIPYEVD 54
S P V WAQR +Y+ ++L D + D L+ +G + D I YE
Sbjct: 5 SLRPHVHWAQRHRELYLRVELSDVKNPDVSIADNVLRFRAQGH-----GAKGDNI-YEFQ 58
Query: 55 IDLYDKVDVNESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDED 112
I+ + V+ + V R ++ V+K E+ WW RL KQ K P+FL D+D+W+DE
Sbjct: 59 IEFLEPVE-PKPVCRVTQRQLNITVQKKESSWWERLTKQE-KRPLFLAPDFDRWLDES 114
>sp|Q9P035|HACD3_HUMAN Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Homo sapiens GN=PTPLAD1 PE=1 SV=2
Length = 362
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
Query: 5 PTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGP--DKIPYEVDIDLYDKVD 62
P V WAQR +Y+ ++L D Q+ + + F + G D + YE ++ D V
Sbjct: 8 PHVYWAQRHRELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNV-YEFHLEFLDLVK 66
Query: 63 VNESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDED 112
E + R ++ V+K ++WW RL KQ K P+FL D+D+W+DE
Sbjct: 67 -PEPVYKLTQRQVNITVQKKVSQWWERLTKQE-KRPLFLAPDFDRWLDES 114
>sp|Q9VH95|YC17_DROME Uncharacterized protein CG16817 OS=Drosophila melanogaster
GN=CG16817 PE=1 SV=1
Length = 184
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 19/151 (12%)
Query: 5 PTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPD-KIPYEVDIDLYDKVDV 63
P V WAQR D +Y+ ID+ + +D++ K+ E F F + D YEV ++ +VD
Sbjct: 10 PPVSWAQRNDLIYVIIDV-ECKDIEHKVT-EKTFTFKGVNVLDPSKKYEVTLNFLHEVDP 67
Query: 64 NESKASVGLRNIHYLV-KKAENKWWSRLLKQAGKPPVFLKVDWDKWIDE--DEEGKDDKP 120
+ + R + + + KKA +WS L K FLK ++ KW DE DEEG D K
Sbjct: 68 EKVTSKNIGRCLEFTIPKKAAGPYWSSLTTDKTKLH-FLKANFAKWRDESDDEEG-DQKD 125
Query: 121 DMDFGDLDFSKMNMGGLDAEAAGGDENDESD 151
+ FG+ + GGD N++ D
Sbjct: 126 NSMFGNF-----------LNSPGGDWNNKFD 145
>sp|Q8K2C9|HACD3_MOUSE Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Mus musculus GN=ptplad1 PE=1 SV=2
Length = 362
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 5 PTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGP--DKIPYEVDIDLYDKVD 62
P V WAQR +Y+ ++L D Q+ + + F + G D + YE ++ D V
Sbjct: 8 PHVYWAQRHRELYLRVELSDVQNPAISITDNVLHFKAQGHGAKGDNV-YEFHLEFLDLVK 66
Query: 63 VNESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDED 112
E + R ++ V+K + WW RL KQ K P+FL D+D+W+DE
Sbjct: 67 -PEPAYRLTQRQVNITVQKKGSHWWERLTKQE-KRPLFLAPDFDRWLDES 114
>sp|Q5NVQ2|PTAD1_PONAB Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein]
dehydratase 3 OS=Pongo abelii GN=PTPLAD1 PE=2 SV=1
Length = 364
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 5 PTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDK--IPYEVDIDLYDKVD 62
P V WAQR +Y+ ++L D Q+ + E F A K YE ++ D V
Sbjct: 10 PHVYWAQRHRELYLRVELSDVQNPAIS-TTENVLHFKAQGHGAKGDNVYEFHLEFLDLVK 68
Query: 63 VNESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDED 112
E + R ++ V+K ++WW RL KQ K P+FL D+D+W+DE
Sbjct: 69 -PEPVYKLTQRQVNITVQKKVSQWWERLTKQE-KRPLFLAPDFDRWLDES 116
>sp|Q9D9A7|PTG3L_MOUSE Putative protein PTGES3L OS=Mus musculus GN=Ptges3l PE=2 SV=1
Length = 131
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 62/120 (51%), Gaps = 7/120 (5%)
Query: 1 MSRHPT-VKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYD 59
M R P W R V++ + D+ DV + +E + + FS +G D + +I+ Y
Sbjct: 1 MERQPARTLWYDRPKYVFMEFCVEDSTDVSVLIE-DHRVVFSCRNG-DGVELYNEIEFYA 58
Query: 60 KVDVNESKASVGLRNIHYLVKKAENKW-WSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDD 118
KV+ +S+ R+I V+K + K W RL K+ KP V+L VD+D W D EG D+
Sbjct: 59 KVNSKDSQDKRSGRSITCFVRKWKEKVAWPRLTKEDIKP-VWLSVDFDNW--RDWEGDDE 115
>sp|Q9CWU0|TDR12_MOUSE Tudor domain-containing protein 12 OS=Mus musculus GN=Tdrd12 PE=2
SV=2
Length = 1215
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 19/146 (13%)
Query: 2 SRHPTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSATSGPDKIPYEVDIDLYDKV 61
S HP +KW Q+ D V + I + + +D K K + + FSA G DK Y D++L +
Sbjct: 1073 SFHPQIKWFQKDDVVILKIKIRNVKDYKCKFFTD-RVIFSAWVG-DKF-YLADLELQGDI 1129
Query: 62 DVNESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDDKPD 121
++ K + + K + + W LLKQ F D+D W EE ++D P
Sbjct: 1130 RKDDCKCIIKDDEPLITLAKEKQECWCGLLKQRNPNVAF---DFDHW----EECEEDSP- 1181
Query: 122 MDFGDLDFSK-MNMGGLDAEAAGGDE 146
FSK +N L + A E
Sbjct: 1182 -------FSKVVNSKNLSCKVAALAE 1200
>sp|P24851|LT_POVBO Large T antigen OS=Bovine polyomavirus PE=2 SV=2
Length = 619
Score = 34.7 bits (78), Expect = 0.37, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 20/81 (24%)
Query: 98 PVFLKVDWDKWIDEDEEGKDDKPDMDFGDLDFSKMNMGGLDAEAAGGDENDESDTEEENE 157
P + W++W +E +G D++ DL +E + SD EEEN
Sbjct: 70 PEYGTSQWEQWWEEFNQGFDEQ------DLHCD--------------EELEPSDNEEENP 109
Query: 158 VGTTPAGNREAPPPSTSSEPD 178
G+ G++ PP + PD
Sbjct: 110 AGSQAPGSQATPPKKPRTSPD 130
>sp|Q869L3|MDN1_DICDI Midasin OS=Dictyostelium discoideum GN=mdn1 PE=3 SV=2
Length = 5900
Score = 32.3 bits (72), Expect = 1.9, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 8/78 (10%)
Query: 111 EDEEGKDDKPDMDFGDLDFSKMNMGGLDAEAAGGDENDESD--------TEEENEVGTTP 162
+DE KD + + D SK N+ D E D +D T EN+ G
Sbjct: 5295 QDETPKDSEQPLGVKDKTGSKSNVSNTDEEMKDESNQDNADDDSGMTQPTPSENDTGALK 5354
Query: 163 AGNREAPPPSTSSEPDTK 180
+ PP S++ +P K
Sbjct: 5355 NLKSQPPPQSSAQQPPKK 5372
>sp|Q9CR95|NECP1_MOUSE Adaptin ear-binding coat-associated protein 1 OS=Mus musculus
GN=Necap1 PE=1 SV=2
Length = 275
Score = 31.2 bits (69), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 109 IDEDEEGKDDKPDMDFG--DLDFSKMNMGGLDAEAAGGDENDESDTEEENEVGTTPAGNR 166
I ++ + D++P +D G + K+++G + A+ G + S T + + P G
Sbjct: 136 ISKESQEMDNRPKLDLGFKEGQTIKLSIGNITAKKGGASKPRASGTGGLSLLPPPPGGKV 195
Query: 167 EAPPPSTS 174
PPPS+S
Sbjct: 196 TIPPPSSS 203
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.132 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,904,246
Number of Sequences: 539616
Number of extensions: 3744123
Number of successful extensions: 13050
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 176
Number of HSP's that attempted gapping in prelim test: 12360
Number of HSP's gapped (non-prelim): 629
length of query: 182
length of database: 191,569,459
effective HSP length: 110
effective length of query: 72
effective length of database: 132,211,699
effective search space: 9519242328
effective search space used: 9519242328
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 57 (26.6 bits)