Citrus Sinensis ID: 030131


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180--
MEGQVGGSGEEFAVGCLLSIKTTLGDEFDGQVMAFDRFTNMLVIQEGLKSGPRRNIRLLNANYIKDFSFLGQADDPLDPKKCFLDLSRLQAREHLAVRQAEADAQRIGVGVTTEAQNIFDALSKTLPVRWDKTVIVVMNEVRVSSPYLPESVSGGTAAANERVKKVLEFERKRLQARGSSQG
cccccccccccEEcccEEEEEEccccEEEEEEEEEEccccEEEEEEcccccccccEEEEEcccEEEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHccccEEECccEEEEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHccccc
**********EFAVGCLLSIKTTLGDEFDGQVMAFDRFTNMLVIQEGLKSGPRRNIRLLNANYIKDFSFLGQADDPLDPKKCFLDLSRLQAREHLAVRQAEADAQRIGVGVTTEAQNIFDALSKTLPVRWDKTVIVVMNEVRVSSPYLPESVSGGTAAANERVKKVLEFER***********
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MEGQVGGSGEEFAVGCLLSIKTTLGDEFDGQVMAFDRFTNMLVIQEGLKSGPRRNIRLLNANYIKDFSFLGQADDPLDPKKCFLDLSRLQAREHLAVRQAEADAQRIGVGVTTEAQNIFDALSKTLPVRWDKTVIVVMNEVRVSSPYLPESVSGGTAAANERVKKVLEFERKRLQARGSSQG

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Protein LSM12 homolog probableQ6P833
Protein LSM12 homolog probableQ0VCF9
Protein LSM12 homolog probableQ5RAT5

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1Y96, chain A
Confidence level:confident
Coverage over the Query: 13-74
View the alignment between query and template
View the model in PyMOL
Template: 1M5Q, chain A
Confidence level:probable
Coverage over the Query: 13-72,83-126
View the alignment between query and template
View the model in PyMOL