BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030137
(182 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P87109|YDK2_SCHPO Probable phospholipase C20G8.02, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC20G8.02 PE=3 SV=1
Length = 757
Score = 54.3 bits (129), Expect = 5e-07, Method: Composition-based stats.
Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 12/153 (7%)
Query: 4 HLLQRE----EELLSNWWKEYAECSEGPRERASSIKKSD----VQASLTESVRSAELYEV 55
HLL R L W+ R + IKK+ A +E + + L V
Sbjct: 82 HLLSRSVTDAPSLRVRWFYAVDRPLRKSRTGPTEIKKAKNFLPFSAEDSEHIEKSYLKAV 141
Query: 56 EEERVGVPV---KGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIREDVA 112
E + PV + LY V++V R P+YW+G R+LRG WF +G P E++A
Sbjct: 142 ENDGQSEPVNVNEDYLYSVNVVSRELSPIYWDGPVYRILRGTWFFSRGD-KLYPCEENLA 200
Query: 113 EQLEIAYRSQVWHRRTFNLLDFLQLELTCKALL 145
Q+E Y + +R N D + ALL
Sbjct: 201 TQVEEGYLNSCPYREFSNEKDSAAAQSKTWALL 233
>sp|Q8NEL9|DDHD1_HUMAN Phospholipase DDHD1 OS=Homo sapiens GN=DDHD1 PE=1 SV=2
Length = 900
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 23 CSE-GPRERASSIKKSDVQASLTESVRSAELYEVEEERV-GVPVKGGLYEVDLVRRHCFP 80
CS GP + D +S E VE + V V+GGLYEVD+ + C+P
Sbjct: 216 CSPTGPASSSGEDDDEDRACGFCQSTTGHEPEMVELVNIEPVCVRGGLYEVDVTQGECYP 275
Query: 81 VYWN-GDNRRVLRGHWFARKGGLDWLPIREDVAEQLE 116
VYWN D V+RG WF W P+ E+ + +E
Sbjct: 276 VYWNQADKIPVMRGQWFIDG---TWQPLEEEESNLIE 309
>sp|O46606|DDHD1_BOVIN Phospholipase DDHD1 OS=Bos taurus GN=DDHD1 PE=1 SV=1
Length = 875
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Query: 64 VKGGLYEVDLVRRHCFPVYWN-GDNRRVLRGHWFARKGGLDWLPIREDVAEQLE 116
V+GGLYEVD+ + C+PVYWN D V+RG WF W P+ E+ + +E
Sbjct: 262 VRGGLYEVDVTQGECYPVYWNQSDKIPVMRGQWFIDG---TWQPLEEEESNLIE 312
>sp|Q6NZC7|S23IP_MOUSE SEC23-interacting protein OS=Mus musculus GN=Sec23ip PE=1 SV=2
Length = 998
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 42 SLTESVRSAELY---EVEEERVGVPVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFAR 98
S+ +S+ E+Y + + E V + GG Y+V L R VYW + V R WF
Sbjct: 285 SVLDSLNLEEIYNSVQPDPESVVLGTDGGRYDVYLYDRMRKSVYWEEEPTEVRRCTWF-Y 343
Query: 99 KGGLD--WLPIREDVAEQLEIAYRSQV----WHRR 127
KG D ++P E+ +E+LE Y+ V WHRR
Sbjct: 344 KGDTDSRFIPYTEEFSEKLEAEYKKAVSTNQWHRR 378
>sp|Q9Y6Y8|S23IP_HUMAN SEC23-interacting protein OS=Homo sapiens GN=SEC23IP PE=1 SV=1
Length = 1000
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
Query: 42 SLTESVRSAELY---EVEEERVGVPVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFAR 98
S+ +S+ E+Y + + E V + GG Y+V L R YW + V R WF
Sbjct: 289 SVFDSLNLEEIYNSVQPDPESVVLGTDGGRYDVYLYDRIRKAAYWEEEPAEVRRCTWF-Y 347
Query: 99 KGGLD--WLPIREDVAEQLEIAYRSQV----WHRR 127
KG D ++P E+ +E+LE Y+ V WHRR
Sbjct: 348 KGDTDSRFIPYTEEFSEKLEAEYKKAVTTNQWHRR 382
>sp|O94830|DDHD2_HUMAN Phospholipase DDHD2 OS=Homo sapiens GN=DDHD2 PE=1 SV=2
Length = 711
Score = 37.4 bits (85), Expect = 0.055, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 62 VPVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLD--WLPIREDVAEQLEIAY 119
VP GG Y+V L R + VYW+ V R WF KG D ++P E ++ LE Y
Sbjct: 82 VPTDGGRYDVHLGERMRYAVYWDELASEVRRCTWF-YKGDKDNKYVPYSESFSQVLEETY 140
>sp|Q12204|YOR22_YEAST Probable phospholipase YOR022C, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YOR022C PE=1
SV=1
Length = 715
Score = 37.4 bits (85), Expect = 0.062, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 42 SLTESVRSAELYEVEEERVGVPVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGG 101
S+ +S R + + +E R + + L++VDL P YW G +V RG WF
Sbjct: 58 SVDDSNRLEKASKRQERRPVLVNEDYLFKVDLSHMELSPTYWEGPTYQVRRGVWFDSSNQ 117
Query: 102 LDWLPIREDVAEQLEIAYR 120
P+ D+ ++E Y+
Sbjct: 118 ----PLSSDLTSEIEGLYK 132
>sp|Q80Y98|DDHD2_MOUSE Phospholipase DDHD2 OS=Mus musculus GN=Ddhd2 PE=1 SV=3
Length = 699
Score = 36.6 bits (83), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 57 EERVGVPVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLD--WLPIREDVAEQ 114
ER+ VP GG Y+V L R + VYW+ V R WF KG D ++P E ++
Sbjct: 78 NERI-VPTDGGRYDVHLGERMRYAVYWDELPSEVRRCTWFY-KGDKDNKYVPYSESFSQV 135
Query: 115 LEIAY 119
LE Y
Sbjct: 136 LEDTY 140
>sp|Q32NQ7|DAAF3_XENLA Dynein assembly factor 3, axonemal OS=Xenopus laevis GN=dnaaf3 PE=2
SV=1
Length = 485
Score = 33.5 bits (75), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Query: 79 FPV--YWNGDNRRVLRGHWFARKGGLDW 104
FP+ YW+G NRR L + +RKG DW
Sbjct: 178 FPIDKYWDGKNRRHLGTRYDSRKGAYDW 205
>sp|P14429|HA17_MOUSE H-2 class I histocompatibility antigen, Q7 alpha chain OS=Mus
musculus GN=H2-Q7 PE=1 SV=1
Length = 334
Score = 30.0 bits (66), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 19/139 (13%)
Query: 25 EGPR--ERASSIKKSDVQASLTESVRSAELYEVEEERVGVPVKGGLYEVDLVRRHCFPVY 82
EGP ER + I K Q S S+R+A+ Y + + G +Y D+
Sbjct: 76 EGPEYWERETQIAKGHEQ-SFRGSLRTAQSY-YNQSKGGSHTLQWMYGCDM--------- 124
Query: 83 WNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQV----WHRRTFNLLDFLQLE 138
G + R+LRG+ G D++ + ED+ + +Q+ W + D LE
Sbjct: 125 --GSDGRLLRGYLQFAYEGRDYIALNEDLKTWTAVDMAAQITRRKWEQAGIAEKDQAYLE 182
Query: 139 LTCKALLQVFMHFLLEKMI 157
TC L+ ++ E ++
Sbjct: 183 GTCMQSLRRYLQLGKETLL 201
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,748,228
Number of Sequences: 539616
Number of extensions: 2528872
Number of successful extensions: 6659
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 6647
Number of HSP's gapped (non-prelim): 20
length of query: 182
length of database: 191,569,459
effective HSP length: 110
effective length of query: 72
effective length of database: 132,211,699
effective search space: 9519242328
effective search space used: 9519242328
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 57 (26.6 bits)