Query 030138
Match_columns 182
No_of_seqs 187 out of 805
Neff 4.0
Searched_HMMs 29240
Date Mon Mar 25 14:36:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030138.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030138hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pny_A Isopentenyl-diphosphate 100.0 4.5E-30 1.5E-34 215.8 9.5 106 68-175 18-137 (246)
2 2dho_A Isopentenyl-diphosphate 100.0 4.3E-29 1.5E-33 208.0 6.9 105 69-175 8-126 (235)
3 3dup_A MUTT/nudix family prote 99.8 1.8E-21 6.1E-26 169.6 7.9 82 88-175 89-179 (300)
4 1hzt_A Isopentenyl diphosphate 99.8 6.7E-21 2.3E-25 149.3 5.8 84 86-174 1-89 (190)
5 2fkb_A Putative nudix hydrolas 99.8 4.6E-20 1.6E-24 142.0 8.4 88 82-175 3-95 (180)
6 1q27_A Putative nudix hydrolas 99.7 1.4E-17 4.9E-22 127.1 7.3 77 88-173 6-90 (171)
7 1f3y_A Diadenosine 5',5'''-P1, 99.3 2.8E-12 9.5E-17 95.6 4.2 56 118-174 10-66 (165)
8 1sjy_A MUTT/nudix family prote 99.1 1.9E-10 6.6E-15 85.6 5.8 56 118-174 9-71 (159)
9 3oga_A Nucleoside triphosphata 99.0 2.1E-10 7.3E-15 86.8 5.4 57 118-175 23-84 (165)
10 3eds_A MUTT/nudix family prote 99.0 3.4E-10 1.2E-14 85.3 5.4 56 118-175 17-72 (153)
11 3grn_A MUTT related protein; s 99.0 7.4E-10 2.5E-14 82.8 5.9 55 119-174 5-64 (153)
12 1rya_A GDP-mannose mannosyl hy 98.9 1.2E-09 4.3E-14 81.2 5.8 53 121-174 17-72 (160)
13 3r03_A Nudix hydrolase; struct 98.9 1.2E-09 4.1E-14 80.0 5.4 55 119-174 5-63 (144)
14 3fcm_A Hydrolase, nudix family 98.9 1.4E-09 4.8E-14 85.7 6.0 57 118-175 41-98 (197)
15 2kdv_A RNA pyrophosphohydrolas 98.9 1.9E-09 6.4E-14 83.1 6.4 55 119-174 5-59 (164)
16 2rrk_A ORF135, CTP pyrophospho 98.9 2.7E-09 9.3E-14 77.6 6.5 55 120-175 6-64 (140)
17 3gg6_A Nudix motif 18, nucleos 98.9 1.7E-09 5.9E-14 80.8 5.2 56 119-175 17-75 (156)
18 3hhj_A Mutator MUTT protein; n 98.9 1.6E-09 5.3E-14 81.4 4.7 56 118-174 25-84 (158)
19 3ees_A Probable pyrophosphohyd 98.8 4.5E-09 1.5E-13 77.2 5.8 53 122-175 21-77 (153)
20 2o1c_A DATP pyrophosphohydrola 98.8 3.5E-09 1.2E-13 77.4 5.1 52 122-174 9-62 (150)
21 2fvv_A Diphosphoinositol polyp 98.8 4.3E-09 1.5E-13 84.1 5.9 57 118-175 37-95 (194)
22 3f6a_A Hydrolase, nudix family 98.8 4.1E-09 1.4E-13 79.4 5.2 54 120-175 4-57 (159)
23 1mut_A MUTT, nucleoside tripho 98.8 3.4E-09 1.2E-13 75.8 4.1 52 122-175 5-60 (129)
24 3gwy_A Putative CTP pyrophosph 98.8 6.1E-09 2.1E-13 76.7 5.5 51 122-174 6-62 (140)
25 3exq_A Nudix family hydrolase; 98.8 9.1E-09 3.1E-13 78.2 6.2 57 118-175 6-66 (161)
26 3e57_A Uncharacterized protein 98.8 4.3E-09 1.5E-13 87.5 4.8 64 111-175 57-133 (211)
27 2yvp_A NDX2, MUTT/nudix family 98.8 9.7E-09 3.3E-13 79.1 6.1 52 123-175 42-97 (182)
28 4dyw_A MUTT/nudix family prote 98.8 1.1E-08 3.9E-13 77.4 6.3 56 118-175 25-83 (157)
29 2jvb_A Protein PSU1, mRNA-deca 98.8 5.7E-09 1.9E-13 77.0 4.4 53 122-175 4-57 (146)
30 1v8y_A ADP-ribose pyrophosphat 98.8 7.3E-09 2.5E-13 79.2 5.0 55 119-175 30-89 (170)
31 1ktg_A Diadenosine tetraphosph 98.7 7.3E-09 2.5E-13 75.3 4.7 54 121-175 2-59 (138)
32 1nqz_A COA pyrophosphatase (MU 98.7 1.1E-08 3.6E-13 79.8 5.1 55 118-174 31-92 (194)
33 2pqv_A MUTT/nudix family prote 98.7 8.9E-09 3E-13 76.8 4.4 53 118-174 15-67 (154)
34 3q93_A 7,8-dihydro-8-oxoguanin 98.7 1.6E-08 5.3E-13 78.7 5.8 54 121-175 23-79 (176)
35 2b06_A MUTT/nudix family prote 98.7 1.9E-08 6.5E-13 74.8 5.8 54 119-175 5-65 (155)
36 1vcd_A NDX1; nudix protein, di 98.7 2.6E-08 9E-13 71.3 6.3 50 123-174 3-52 (126)
37 1k2e_A Nudix homolog; nudix/MU 98.7 1.8E-08 6.1E-13 76.0 5.4 51 123-175 2-52 (156)
38 3son_A Hypothetical nudix hydr 98.7 1.8E-08 6E-13 74.8 4.9 51 124-175 7-60 (149)
39 2yyh_A MUTT domain, 8-OXO-DGTP 98.7 2.7E-08 9.2E-13 73.0 5.3 53 121-174 8-65 (139)
40 3shd_A Phosphatase NUDJ; nudix 98.7 2.5E-08 8.7E-13 74.0 5.2 51 122-174 5-57 (153)
41 2w4e_A MUTT/nudix family prote 98.6 2.1E-08 7.2E-13 75.0 4.0 52 123-175 6-61 (145)
42 2pbt_A AP4A hydrolase; nudix p 98.6 5.2E-08 1.8E-12 70.2 5.8 51 122-175 4-54 (134)
43 3u53_A BIS(5'-nucleosyl)-tetra 98.6 3.3E-08 1.1E-12 74.5 4.9 52 123-175 4-65 (155)
44 2azw_A MUTT/nudix family prote 98.6 4.9E-08 1.7E-12 71.4 4.6 54 120-175 16-70 (148)
45 3id9_A MUTT/nudix family prote 98.5 9.7E-08 3.3E-12 72.4 5.9 56 118-175 19-75 (171)
46 3cng_A Nudix hydrolase; struct 98.5 8.7E-08 3E-12 75.1 5.7 52 122-175 40-94 (189)
47 3h95_A Nucleoside diphosphate- 98.5 7.2E-08 2.4E-12 76.1 5.0 53 122-175 26-81 (199)
48 2b0v_A Nudix hydrolase; struct 98.5 1.1E-07 3.7E-12 70.2 5.0 52 122-175 8-62 (153)
49 3fk9_A Mutator MUTT protein; s 98.5 1.5E-07 5.1E-12 74.2 5.9 52 122-175 4-55 (188)
50 2fb1_A Conserved hypothetical 98.5 9E-08 3.1E-12 78.2 4.8 54 120-174 11-70 (226)
51 1mk1_A ADPR pyrophosphatase; n 98.5 8.4E-08 2.9E-12 76.5 3.9 52 123-175 44-100 (207)
52 3i7u_A AP4A hydrolase; nudix p 98.5 2.2E-07 7.5E-12 69.6 5.9 51 122-175 4-54 (134)
53 3i9x_A MUTT/nudix family prote 98.4 1.4E-07 4.8E-12 73.4 4.4 56 119-175 24-96 (187)
54 3o6z_A GDP-mannose pyrophospha 98.4 2.9E-07 9.8E-12 72.7 6.2 53 121-175 44-107 (191)
55 3q1p_A Phosphohydrolase (MUTT/ 98.4 2.7E-07 9.3E-12 73.6 6.1 53 121-175 67-119 (205)
56 2qjo_A Bifunctional NMN adenyl 98.4 2.6E-07 8.8E-12 77.3 5.4 54 120-175 201-257 (341)
57 1vhz_A ADP compounds hydrolase 98.4 2.1E-07 7.3E-12 74.2 4.5 51 123-175 50-104 (198)
58 2a6t_A SPAC19A8.12; alpha/beta 98.4 1.8E-07 6.2E-12 79.0 4.3 52 123-175 102-155 (271)
59 2qjt_B Nicotinamide-nucleotide 98.4 2.8E-07 9.4E-12 77.8 5.4 54 120-175 206-262 (352)
60 1u20_A U8 snoRNA-binding prote 98.4 3.5E-07 1.2E-11 73.8 5.3 54 119-174 30-95 (212)
61 3gz5_A MUTT/nudix family prote 98.3 4E-07 1.4E-11 75.2 4.8 54 121-175 21-82 (240)
62 1g0s_A Hypothetical 23.7 kDa p 98.3 4.2E-07 1.4E-11 73.0 4.4 53 122-175 57-119 (209)
63 3q91_A Uridine diphosphate glu 98.3 2.6E-07 9E-12 76.0 3.1 53 122-175 36-125 (218)
64 3f13_A Putative nudix hydrolas 98.3 4.8E-07 1.6E-11 70.2 4.1 53 119-174 13-65 (163)
65 1x51_A A/G-specific adenine DN 98.3 5.6E-07 1.9E-11 67.3 4.2 53 121-174 17-78 (155)
66 3o8s_A Nudix hydrolase, ADP-ri 98.3 1.2E-06 4.2E-11 69.8 6.1 52 121-175 69-120 (206)
67 2fml_A MUTT/nudix family prote 98.1 3E-06 1E-10 71.1 5.6 53 121-174 38-98 (273)
68 3fsp_A A/G-specific adenine gl 98.1 3.6E-06 1.2E-10 73.6 6.3 52 122-175 240-295 (369)
69 1vk6_A NADH pyrophosphatase; 1 98.0 4.6E-06 1.6E-10 70.8 4.9 48 127-175 144-193 (269)
70 1q33_A Pyrophosphatase, ADP-ri 98.0 1.1E-05 3.7E-10 68.8 6.7 39 135-174 140-178 (292)
71 2dsc_A ADP-sugar pyrophosphata 98.0 4.1E-06 1.4E-10 66.9 3.8 53 122-175 61-121 (212)
72 3fjy_A Probable MUTT1 protein; 97.6 4E-05 1.4E-09 66.0 4.8 44 131-175 35-78 (364)
73 3qsj_A Nudix hydrolase; struct 97.4 6.5E-05 2.2E-09 62.7 2.2 58 119-177 6-91 (232)
74 3kvh_A Protein syndesmos; NUDT 97.3 0.00011 3.9E-09 62.0 3.4 54 120-175 19-84 (214)
75 2xsq_A U8 snoRNA-decapping enz 97.2 0.00031 1.1E-08 57.4 5.0 38 135-174 66-104 (217)
76 3bho_A Cleavage and polyadenyl 95.8 0.012 4E-07 49.5 5.3 55 117-174 54-111 (208)
77 3rh7_A Hypothetical oxidoreduc 93.3 0.05 1.7E-06 47.3 3.3 42 125-173 186-227 (321)
78 3zv0_C H/ACA ribonucleoprotein 51.3 16 0.00054 30.1 4.2 53 88-150 109-162 (195)
79 3k6e_A CBS domain protein; str 43.6 20 0.00068 26.5 3.4 22 89-110 116-137 (156)
80 3ctu_A CBS domain protein; str 41.6 26 0.0009 24.9 3.7 22 89-110 116-137 (156)
81 3lqn_A CBS domain protein; csg 39.9 26 0.00088 24.7 3.4 25 86-110 114-138 (150)
82 1yav_A Hypothetical protein BS 38.1 27 0.00094 24.9 3.3 32 78-109 105-136 (159)
83 2emq_A Hypothetical conserved 36.6 31 0.001 24.4 3.4 21 89-109 113-133 (157)
84 1zxu_A AT5G01750 protein; PFAM 36.5 38 0.0013 26.8 4.2 52 90-153 53-108 (217)
85 3gby_A Uncharacterized protein 34.4 24 0.00084 24.2 2.5 21 89-109 100-120 (128)
86 3kpb_A Uncharacterized protein 33.2 28 0.00096 23.4 2.6 21 89-109 94-114 (122)
87 3nqr_A Magnesium and cobalt ef 33.1 28 0.00095 24.0 2.6 21 89-109 100-120 (127)
88 3i8n_A Uncharacterized protein 32.9 28 0.00096 24.1 2.6 21 89-109 103-123 (130)
89 4gqw_A CBS domain-containing p 31.3 31 0.001 23.9 2.6 22 89-110 117-138 (152)
90 3gf8_A Putative polysaccharide 31.1 32 0.0011 29.1 3.1 17 124-140 38-54 (296)
91 2nyc_A Nuclear protein SNF4; b 30.9 31 0.0011 23.7 2.5 21 89-109 115-135 (144)
92 2ef7_A Hypothetical protein ST 30.9 31 0.0011 23.6 2.5 21 89-109 99-119 (133)
93 3lfr_A Putative metal ION tran 30.2 33 0.0011 24.1 2.6 22 89-110 101-122 (136)
94 2rih_A Conserved protein with 29.9 33 0.0011 23.9 2.5 21 89-109 102-122 (141)
95 3sl7_A CBS domain-containing p 29.9 33 0.0011 24.6 2.6 21 89-109 130-150 (180)
96 3jtf_A Magnesium and cobalt ef 29.7 33 0.0011 23.7 2.5 22 89-110 100-121 (129)
97 3pay_A Putative adhesin; struc 29.2 36 0.0012 29.1 3.2 18 123-140 36-53 (314)
98 2p9m_A Hypothetical protein MJ 28.8 36 0.0012 23.3 2.6 21 90-110 111-131 (138)
99 3hf7_A Uncharacterized CBS-dom 28.4 35 0.0012 23.8 2.4 21 89-109 101-121 (130)
100 3oi8_A Uncharacterized protein 28.4 34 0.0012 24.7 2.5 21 89-109 134-154 (156)
101 3lv9_A Putative transporter; C 28.2 36 0.0012 24.0 2.6 21 89-109 119-139 (148)
102 2uv4_A 5'-AMP-activated protei 27.8 37 0.0013 24.1 2.5 21 89-109 125-145 (152)
103 2yzi_A Hypothetical protein PH 27.1 32 0.0011 23.7 2.0 20 89-109 104-123 (138)
104 1o50_A CBS domain-containing p 26.6 40 0.0014 24.1 2.5 21 89-109 127-147 (157)
105 3oco_A Hemolysin-like protein 25.3 36 0.0012 24.2 2.1 22 89-110 117-138 (153)
106 4esy_A CBS domain containing m 24.7 52 0.0018 23.9 2.9 21 90-110 51-71 (170)
107 2v2f_A Penicillin binding prot 24.0 42 0.0014 18.3 1.8 14 91-104 7-20 (26)
108 3lhh_A CBS domain protein; str 23.8 45 0.0015 24.4 2.4 22 89-110 138-159 (172)
109 2vgl_S AP-2 complex subunit si 23.6 52 0.0018 24.4 2.8 16 125-140 3-18 (142)
110 3lif_A Putative diguanylate cy 22.5 74 0.0025 24.2 3.5 48 92-140 133-182 (254)
111 4b6a_O 60S ribosomal protein L 21.9 22 0.00074 29.4 0.3 59 86-154 1-70 (199)
112 3bqa_A Sensor protein PHOQ; hi 21.9 42 0.0015 26.7 2.0 56 125-180 42-115 (148)
113 3ocm_A Putative membrane prote 21.9 46 0.0016 24.8 2.2 22 89-110 131-152 (173)
114 1w63_Q Adapter-related protein 21.4 60 0.002 24.7 2.8 16 125-140 3-18 (158)
115 3k2v_A Putative D-arabinose 5- 20.8 56 0.0019 23.0 2.4 23 89-111 62-84 (149)
116 3qaj_A Glutamine synthetase; A 20.2 2.2E+02 0.0076 25.4 6.6 89 90-181 93-188 (444)
No 1
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=99.96 E-value=4.5e-30 Score=215.79 Aligned_cols=106 Identities=34% Similarity=0.409 Sum_probs=97.3
Q ss_pred ccCCCCccccccHHHHHhhhcCeEEEeecCCcEEeeeechhchhhhccccCCccEEEEEEEEEcCCCcEEEEe-----ec
Q 030138 68 TMGDATTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQV-----CL 142 (182)
Q Consensus 68 ~~~~~~~~~~~d~~Q~~~M~eE~vdLVDe~d~~iG~~~R~~~Hr~e~i~~~GLlHRAfsVfLFNs~GeLLLQq-----~~ 142 (182)
..|++..+++||+.|+++| +|+|+|||++|+++|.++|.+||.+++|+ +|++||||+|+|||++|+||||| .+
T Consensus 18 ~~~~~~~~~~~~~~q~~~~-~E~~~lvd~~~~~iG~~~r~~~h~~~~~~-~g~~h~av~v~v~~~~g~lLLqrRs~~K~~ 95 (246)
T 2pny_A 18 GSMSDINLDWVDRRQLQRL-EEMLIVVDENDKVIGADTKRNCHLNENIE-KGLLHRAFSVVLFNTKNRILIQQRSDTKVT 95 (246)
T ss_dssp SCGGGGCCTTSCHHHHHHT-TCEEEEECTTCCEEEEEEHHHHTBHHHHT-TTCCEEEEEEEEECTTCCEEEEEECTTCSS
T ss_pred ccccccccccCCHHHHhhc-cceEEEEcCCCCEEEEEEhHHhccccccC-CCcEEEEEEEEEEeCCCEEEEEEecCCCCC
Confidence 4567779999999999988 68999999999999999999999877776 79999999999999999999998 57
Q ss_pred CCCceecccccCcCCC------CCH---HHHHHhhhhccCce
Q 030138 143 FCILWVKTCLSMDCHW------VVQ---ICGLTWEMTDSNIL 175 (182)
Q Consensus 143 fPglWDnTcgGHplaG------Es~---~eAA~REl~ee~~~ 175 (182)
|||+|+++|||||.+| |+. .+||+|||.||.+.
T Consensus 96 ~pG~W~~p~gG~v~~G~~E~~~Et~~~~~eAA~REl~EElGi 137 (246)
T 2pny_A 96 FPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELGI 137 (246)
T ss_dssp STTCBCCSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCC
T ss_pred CCCceEeccCceeccCCcccccccchhHHHHHHHHHHHHHCC
Confidence 9999999999999999 887 89999999999653
No 2
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=99.95 E-value=4.3e-29 Score=207.99 Aligned_cols=105 Identities=38% Similarity=0.507 Sum_probs=84.9
Q ss_pred cCCCCccccccHHHHHhhhcCeEEEeecCCcEEeeeechhchhhhccccCCccEEEEEEEEEcCCCcEEEEe-----ecC
Q 030138 69 MGDATTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQV-----CLF 143 (182)
Q Consensus 69 ~~~~~~~~~~d~~Q~~~M~eE~vdLVDe~d~~iG~~~R~~~Hr~e~i~~~GLlHRAfsVfLFNs~GeLLLQq-----~~f 143 (182)
.|.+..++++|+.|+++| +|+|+|||++|+++|.+.|.+||.+++++ +|++||||+|+|||++|+||||| .+|
T Consensus 8 ~~~~~~~~~~~~~q~~~~-~E~~~lvd~~~~~~G~~~r~~~h~~~~~~-~g~~h~av~v~v~~~~g~lLLq~R~~~k~~~ 85 (235)
T 2dho_A 8 HMPEINTNHLDKQQVQLL-AEMCILIDENDNKIGAETKKNCHLNENIE-KGLLHRAFSVFLFNTENKLLLQQRSDAKITF 85 (235)
T ss_dssp -------------CCCSS-CCEEEEECTTCCEEEEEEHHHHTBHHHHT-TTCCEEEEEEEEECTTCCEEEEEECTTCSSS
T ss_pred cCCcccccccChhHHhhc-CcEEEEEcCCCCEEEEEEhHHhccccccC-CCceEEEEEEEEEcCCCEEEEEEecCcCCCC
Confidence 355678999999999987 68999999999999999999999777776 79999999999999999999998 579
Q ss_pred CCceecccccCcCCC------CCH---HHHHHhhhhccCce
Q 030138 144 CILWVKTCLSMDCHW------VVQ---ICGLTWEMTDSNIL 175 (182)
Q Consensus 144 PglWDnTcgGHplaG------Es~---~eAA~REl~ee~~~ 175 (182)
||+|+++|||||.+| |+. .+||+|||.||.+.
T Consensus 86 pg~W~~p~gG~v~~Ge~E~~~E~~~~~~~Aa~REl~EElGi 126 (235)
T 2dho_A 86 PGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELGI 126 (235)
T ss_dssp TTCEESSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCC
T ss_pred CCcEEeccCceecCCCcccccccchhHHHHHHHHHHHHHCC
Confidence 999999999999999 774 89999999999653
No 3
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=99.84 E-value=1.8e-21 Score=169.57 Aligned_cols=82 Identities=5% Similarity=-0.178 Sum_probs=78.0
Q ss_pred cCeEEEeecCC-cEEeeeechhchhhhccccCCccEEEEEEEEEcCCC---cEEEEe-----ecCCCceecccccCcCCC
Q 030138 88 EDECILVDEND-RVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKY---ELLLQV-----CLFCILWVKTCLSMDCHW 158 (182)
Q Consensus 88 eE~vdLVDe~d-~~iG~~~R~~~Hr~e~i~~~GLlHRAfsVfLFNs~G---eLLLQq-----~~fPglWDnTcgGHplaG 158 (182)
+|+++|||+++ +++|...|..+|+ .|++|++|||++|+.+| +||||| ++|||+||++||||+.+|
T Consensus 89 ~E~~~V~~~~~~~~~~~~eR~~~~~------~G~~~~~vh~~~~~~~~~~~~lll~rRs~~K~~~PG~wd~svaG~i~~G 162 (300)
T 3dup_A 89 GELYRVNQSWGEPTLMLLDRAVVPT------FGVRAYGVHLNGYVGAGADLHLWIGRRSPDKSVAPGKLDNMVAGGQPAD 162 (300)
T ss_dssp SCEEEECSSTTSCCCEEEEGGGTGG------GTCCEEEEEEEEEESCGGGCEEEEEEECTTCSSSTTCEEESEEEECCTT
T ss_pred cccEEeecCCCCeeeEEEEhhhccc------cceEEEEEEEEEEEecCCeeEEEEEeCCCcccCCCCccccccccCCCCC
Confidence 68999999986 8999999999998 89999999999999988 999999 789999999999999999
Q ss_pred CCHHHHHHhhhhccCce
Q 030138 159 VVQICGLTWEMTDSNIL 175 (182)
Q Consensus 159 Es~~eAA~REl~ee~~~ 175 (182)
|+.++||.||+.||-+.
T Consensus 163 Es~~eaA~REl~EElGI 179 (300)
T 3dup_A 163 LSLRQNLIKECAEEADL 179 (300)
T ss_dssp SCHHHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHhCC
Confidence 99999999999999764
No 4
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.82 E-value=6.7e-21 Score=149.32 Aligned_cols=84 Identities=23% Similarity=0.224 Sum_probs=50.4
Q ss_pred hhcCeEEEeecCCcEEeeeechhchhhhccccCCccEEEEEEEEEcCCCcEEEEe-----ecCCCceecccccCcCCCCC
Q 030138 86 MFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQV-----CLFCILWVKTCLSMDCHWVV 160 (182)
Q Consensus 86 M~eE~vdLVDe~d~~iG~~~R~~~Hr~e~i~~~GLlHRAfsVfLFNs~GeLLLQq-----~~fPglWDnTcgGHplaGEs 160 (182)
|.+|+|++||++|+++|...|..||. +.|.+|+++.|+|+|.+|++|||| ..|||+|+++.||++..||+
T Consensus 1 ~~~E~~~v~d~~~~~~g~~~r~~~~~-----~~~~~~~~v~~~i~~~~g~vLl~~R~~~~~~~~g~w~~~PgG~ve~gEt 75 (190)
T 1hzt_A 1 MQTEHVILLNAQGVPTGTLEKYAAHT-----ADTRLHLAFSSWLFNAKGQLLVTRRALSKKAWPGVWTNSVCGHPQLGES 75 (190)
T ss_dssp -----------------------------------CEECEEEEEECTTCCEEEEEECTTCSSSTTCEEESEEECCCTTCC
T ss_pred CCceEEEEECCCCCEeeeEEHhhhcc-----cCCceEEEEEEEEEcCCCEEEEEEeCCCCCCCCCcccCcccccCCCCCC
Confidence 66799999999999999999999993 179999999999999999999988 35899999989999999999
Q ss_pred HHHHHHhhhhccCc
Q 030138 161 QICGLTWEMTDSNI 174 (182)
Q Consensus 161 ~~eAA~REl~ee~~ 174 (182)
..+||.||+.||-+
T Consensus 76 ~~~aa~REl~EEtG 89 (190)
T 1hzt_A 76 NEDAVIRRCRYELG 89 (190)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHC
Confidence 99999999999844
No 5
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.81 E-value=4.6e-20 Score=142.04 Aligned_cols=88 Identities=17% Similarity=0.098 Sum_probs=77.1
Q ss_pred HHHhhhcCeEEEeecCCcEEeeeechhchhhhccccCCccEEEEEEEEEcCCCcEEEEe-----ecCCCceecccccCcC
Q 030138 82 QRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQV-----CLFCILWVKTCLSMDC 156 (182)
Q Consensus 82 Q~~~M~eE~vdLVDe~d~~iG~~~R~~~Hr~e~i~~~GLlHRAfsVfLFNs~GeLLLQq-----~~fPglWDnTcgGHpl 156 (182)
++..|.+|+|++||++++++|..+|..+|. .+++|+++.|+|+|.+|++|||+ ..|||+|++..|||+.
T Consensus 3 ~~~~~~~E~~~i~d~~~~~~g~~~r~~~~~------~~~~~~~~~v~i~~~~~~vLl~~R~~~~~~~~g~w~l~pGG~ve 76 (180)
T 2fkb_A 3 QRRLASTEWVDIVNEENEVIAQASREQMRA------QCLRHRATYIVVHDGMGKILVQRRTETKDFLPGMLDATAGGVVQ 76 (180)
T ss_dssp -----CCCEEEEECTTSCEEEEEEHHHHHH------HTCCEEEEEEEEECSSSCEEEEEECSSCSSSTTCEESSBCCBCB
T ss_pred ccccCCCeeEEEECCCCCEeeEEEHHHhhc------cCceeeEEEEEEECCCCEEEEEECCCCCccCCCcEEeecCCCCC
Confidence 344455799999999999999999999998 79999999999999999999998 3579999998899999
Q ss_pred CCCCHHHHHHhhhhccCce
Q 030138 157 HWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 157 aGEs~~eAA~REl~ee~~~ 175 (182)
.||+..+||.||+.||-++
T Consensus 77 ~gE~~~~aa~REl~EEtGl 95 (180)
T 2fkb_A 77 ADEQLLESARREAEEELGI 95 (180)
T ss_dssp TTCCHHHHHHHHHHHHHCC
T ss_pred CCCCHHHHHHHHHHHHHCC
Confidence 9999999999999998543
No 6
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.71 E-value=1.4e-17 Score=127.14 Aligned_cols=77 Identities=21% Similarity=0.101 Sum_probs=71.4
Q ss_pred cCeEEEeecCCcEEeeeechhc---hhhhccccCCccEEEEEEEEEcCCCcEEEEe-----ecCCCceecccccCcCCCC
Q 030138 88 EDECILVDENDRVVGHENKYNC---HLMEKIESLNLLHRAFSVFLFNSKYELLLQV-----CLFCILWVKTCLSMDCHWV 159 (182)
Q Consensus 88 eE~vdLVDe~d~~iG~~~R~~~---Hr~e~i~~~GLlHRAfsVfLFNs~GeLLLQq-----~~fPglWDnTcgGHplaGE 159 (182)
+|+|++||++++++|...|.++ |. + |+++.|+|+|.+|++||+| ..|||+|++..|||+..||
T Consensus 6 ~E~~~~~d~~~~~~g~~~r~~~~l~~~------~---~~~v~v~i~~~~~~vLl~~r~~~~~~~~g~w~~~PgG~ve~gE 76 (171)
T 1q27_A 6 DERLDLVNERDEVVGQILRTDPALRWE------R---VRVVNAFLRNSQGQLWIPRRSPSKSLFPNALDVSVGGAVQSGE 76 (171)
T ss_dssp SSEEEEESSSSCEEEEEESSCTTSCTT------S---CEEEEEEEEETTTEEEECCSCCSSSCCCCSCCCSEEEECSSSS
T ss_pred ceeeeeecCCCCEeceEEhhhhccccc------c---ceEEEEEEECCCCeEEEEEecCCCCCCCCccccccCccccCCC
Confidence 6899999999999999999999 86 3 9999999999999999998 3479999988899999999
Q ss_pred CHHHHHHhhhhccC
Q 030138 160 VQICGLTWEMTDSN 173 (182)
Q Consensus 160 s~~eAA~REl~ee~ 173 (182)
+..+||.||+.||-
T Consensus 77 s~~~aa~REl~EEt 90 (171)
T 1q27_A 77 TYEEAFRREAREEL 90 (171)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 99999999999984
No 7
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.26 E-value=2.8e-12 Score=95.62 Aligned_cols=56 Identities=9% Similarity=-0.052 Sum_probs=51.5
Q ss_pred CCccEEEEEEEEEcCCCcEEEEe-ecCCCceecccccCcCCCCCHHHHHHhhhhccCc
Q 030138 118 LNLLHRAFSVFLFNSKYELLLQV-CLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNI 174 (182)
Q Consensus 118 ~GLlHRAfsVfLFNs~GeLLLQq-~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~ 174 (182)
.|.+|+++.|+|+|.+|++||+| ..+||+|++. |||+..||+..+||.||+.||-+
T Consensus 10 ~~~~~~~v~~~i~~~~~~vLl~~r~~~~g~w~~P-gG~ve~gE~~~~aa~RE~~EEtG 66 (165)
T 1f3y_A 10 PEGYRRNVGICLMNNDKKIFAASRLDIPDAWQMP-QGGIDEGEDPRNAAIRELREETG 66 (165)
T ss_dssp CSSCCCEEEEEEECTTSCEEEEEETTEEEEEECC-EEECCTTCCHHHHHHHHHHHHHC
T ss_pred ccceeeeEEEEEECCCCcEEEEecCCCCCcEECC-eeccCCCCCHHHHHHHHHHHhhC
Confidence 68899999999999999999998 5579999998 69999999999999999999844
No 8
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.05 E-value=1.9e-10 Score=85.59 Aligned_cols=56 Identities=18% Similarity=0.022 Sum_probs=50.4
Q ss_pred CCccEEEEEEEEEcCCCcEEEEe-ec------CCCceecccccCcCCCCCHHHHHHhhhhccCc
Q 030138 118 LNLLHRAFSVFLFNSKYELLLQV-CL------FCILWVKTCLSMDCHWVVQICGLTWEMTDSNI 174 (182)
Q Consensus 118 ~GLlHRAfsVfLFNs~GeLLLQq-~~------fPglWDnTcgGHplaGEs~~eAA~REl~ee~~ 174 (182)
...+|+++.++|+|.+|++||+| .. +||+|+.- ||++..||+..+||.||+.||-+
T Consensus 9 ~~~~~~~~~~vi~~~~~~vLl~~r~~~~~~~~~~~~w~~P-gG~ve~gE~~~~aa~RE~~EEtG 71 (159)
T 1sjy_A 9 VPVELRAAGVVLLNERGDILLVQEKGIPGHPEKAGLWHIP-SGAVEDGENPQDAAVREACEETG 71 (159)
T ss_dssp CCCCEEEEEEEEBCTTCCEEEEEESCC----CCCCCEECS-EEECCTTSCHHHHHHHHHHHHHS
T ss_pred CCeEEEeEEEEEEeCCCCEEEEEecccCcCCCCCCeEECC-ccccCCCCCHHHHHHHHHHHHHC
Confidence 57899999999999999999988 32 89999986 99999999999999999999844
No 9
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.03 E-value=2.1e-10 Score=86.76 Aligned_cols=57 Identities=14% Similarity=-0.076 Sum_probs=48.0
Q ss_pred CCccEEEEEEEEEcCCCcEEEEe-----ecCCCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 118 LNLLHRAFSVFLFNSKYELLLQV-----CLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 118 ~GLlHRAfsVfLFNs~GeLLLQq-----~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
.+..|+++.++|++.+|++||+| ..+||+|..- ||++..||+..+||.||+.||-++
T Consensus 23 ~~~~~~~~~~~ii~~~~~vLL~~r~~~~~~~~g~w~lP-gG~ve~gE~~~~aa~REl~EEtGl 84 (165)
T 3oga_A 23 NAMRQRTIVCPLIQNDGCYLLCKMADNRGVFPGQWALS-GGGVEPGERIEEALRREIREELGE 84 (165)
T ss_dssp -CCEEEEEEEEEEEETTEEEEEEECC------CCEECC-CEECCTTCCHHHHHHHHHHHHHCS
T ss_pred CCcceEEEEEEEEeCCCEEEEEEecCCCCCCCCeEECC-ccccCCCCCHHHHHHHHHHHHhCC
Confidence 57899999999999999999987 3689999998 799999999999999999999643
No 10
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.00 E-value=3.4e-10 Score=85.29 Aligned_cols=56 Identities=13% Similarity=-0.015 Sum_probs=48.8
Q ss_pred CCccEEEEEEEEEcCCCcEEEEeecCCCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 118 LNLLHRAFSVFLFNSKYELLLQVCLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 118 ~GLlHRAfsVfLFNs~GeLLLQq~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
+..+|+++.++|+|.+|++||||.. +|+|..- ||++..||+..+||+||+.||-++
T Consensus 17 ~~~~~~~v~~ii~~~~~~vLL~~r~-~~~w~lP-gG~ve~gEs~~~aa~REl~EEtGl 72 (153)
T 3eds_A 17 ELIFXPSVAAVIKNEQGEILFQYPG-GEYWSLP-AGAIELGETPEEAVVREVWEETGL 72 (153)
T ss_dssp SCEEEEEEEEEEBCTTCCEEEECC----CBBCS-EEECCTTSCHHHHHHHHHHHHHCE
T ss_pred CcEEeeeEEEEEEcCCCeEEEEEcC-CCcEECC-ccccCCCCCHHHHHHHHHHHHHCc
Confidence 6889999999999999999999844 9999987 899999999999999999999553
No 11
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=98.97 E-value=7.4e-10 Score=82.80 Aligned_cols=55 Identities=15% Similarity=-0.078 Sum_probs=49.4
Q ss_pred CccEEEEEEEEEcCCCcEEEEe-----ecCCCceecccccCcCCCCCHHHHHHhhhhccCc
Q 030138 119 NLLHRAFSVFLFNSKYELLLQV-----CLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNI 174 (182)
Q Consensus 119 GLlHRAfsVfLFNs~GeLLLQq-----~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~ 174 (182)
.-+|.++.++|+|.+|++||+| ..+||+|..- ||++..||+..+||.||+.||-+
T Consensus 5 ~~~~~~v~~vi~~~~~~vLL~~r~~~~~~~~g~w~~P-gG~ve~gE~~~~aa~REl~EE~G 64 (153)
T 3grn_A 5 KPYIISVYALIRNEKGEFLLLRRSENSRTNAGKWDLP-GGKVNPDESLKEGVAREVWEETG 64 (153)
T ss_dssp SCEEEEEEEEEECTTCCEEEEEECTTCSSSTTCEECS-EEECCTTCCHHHHHHHHHHHHHC
T ss_pred CceEEEEEEEEEcCCCcEEEEEEcCCCCCCCCeEECc-eeecCCCCCHHHHHHhhhhhhhC
Confidence 4589999999999999998887 3489999998 89999999999999999999854
No 12
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=98.93 E-value=1.2e-09 Score=81.25 Aligned_cols=53 Identities=11% Similarity=-0.130 Sum_probs=47.2
Q ss_pred cEEEEEEEEEcCCCcEEEEe---ecCCCceecccccCcCCCCCHHHHHHhhhhccCc
Q 030138 121 LHRAFSVFLFNSKYELLLQV---CLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNI 174 (182)
Q Consensus 121 lHRAfsVfLFNs~GeLLLQq---~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~ 174 (182)
...++.++|+|.+|++||+| ..++|+|+.- |||+..||+..+||.||+.||-+
T Consensus 17 ~~~~v~~vi~~~~~~vLl~~r~~~~~~g~w~~P-gG~ve~gE~~~~aa~REl~EEtG 72 (160)
T 1rya_A 17 PLVSLDFIVENSRGEFLLGKRTNRPAQGYWFVP-GGRVQKDETLEAAFERLTMAELG 72 (160)
T ss_dssp CEEEEEEEEECTTSCEEEEEECSSSSTTSEECC-EEECCTTCCHHHHHHHHHHHHHS
T ss_pred cEEEEEEEEEcCCCEEEEEeccCCCCCCEEECC-ccccCCCCCHHHHHHHHHHHHHC
Confidence 45789999999999999987 4469999998 99999999999999999999843
No 13
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=98.92 E-value=1.2e-09 Score=80.01 Aligned_cols=55 Identities=13% Similarity=-0.043 Sum_probs=48.9
Q ss_pred CccEEEEEEEEEcCCCcEEEEe----ecCCCceecccccCcCCCCCHHHHHHhhhhccCc
Q 030138 119 NLLHRAFSVFLFNSKYELLLQV----CLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNI 174 (182)
Q Consensus 119 GLlHRAfsVfLFNs~GeLLLQq----~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~ 174 (182)
...|+++.++|++.+|++||+| ..++|+|..- ||++..||+..+||.||+.||-+
T Consensus 5 ~~~~~~~~~vi~~~~~~vLl~~r~~~~~~~g~w~lP-gG~ve~gE~~~~aa~RE~~EE~G 63 (144)
T 3r03_A 5 LPILLVTAAALIDPDGRVLLAQRPPGKSLAGLWEFP-GGKLEPGETPEAALVRELAEELG 63 (144)
T ss_dssp -CEEEEEEEEEBCTTSCEEEEECCTTSSSTTCEECS-EEECCTTCCHHHHHHHHHHHHHC
T ss_pred CceeEEEEEEEEcCCCEEEEEEeCCCCCCCCcEECC-CcEecCCCCHHHHHHHHHHHHhC
Confidence 4579999999999999999988 4589999995 89999999999999999999854
No 14
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=98.91 E-value=1.4e-09 Score=85.69 Aligned_cols=57 Identities=16% Similarity=0.052 Sum_probs=51.9
Q ss_pred CCccEEEEEEEEEcCCC-cEEEEeecCCCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 118 LNLLHRAFSVFLFNSKY-ELLLQVCLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 118 ~GLlHRAfsVfLFNs~G-eLLLQq~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
...+|.++.++|++.+| ++||+|..++|.|..- |||+..||+..+||+||+.||-++
T Consensus 41 ~~~~h~~~~~vv~~~~~~~vLL~~r~~~g~w~lP-gG~ve~gEs~~eaa~REl~EEtGl 98 (197)
T 3fcm_A 41 NTIAHLTSSAFAVNKERNKFLMIHHNIYNSWAWT-GGHSDNEKDQLKVAIKELKEETGV 98 (197)
T ss_dssp CSSEEEEEEEEEECTTSCEEEEEEETTTTEEECE-EEECTTCCBHHHHHHHHHHHHHCC
T ss_pred CCCccEEEEEEEEECCCCEEEEEEecCCCCEECC-ccccCCCCCHHHHHHHHHHHHHCC
Confidence 45789999999999987 9999996689999998 999999999999999999999765
No 15
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=98.91 E-value=1.9e-09 Score=83.07 Aligned_cols=55 Identities=5% Similarity=-0.110 Sum_probs=49.5
Q ss_pred CccEEEEEEEEEcCCCcEEEEeecCCCceecccccCcCCCCCHHHHHHhhhhccCc
Q 030138 119 NLLHRAFSVFLFNSKYELLLQVCLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNI 174 (182)
Q Consensus 119 GLlHRAfsVfLFNs~GeLLLQq~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~ 174 (182)
..+|.++.++|+|.+|++||++..-+|+|++. |||+..||+..+||.||+.||-+
T Consensus 5 ~~~~~~v~~~i~~~~~~vLl~~r~~~~~w~~p-~G~~e~gE~~~~aa~RE~~EE~G 59 (164)
T 2kdv_A 5 DGYRPNVGIVICNRQGQVMWARRFGQHSWQFP-QGGINPGESAEQAMYRELFEEVG 59 (164)
T ss_dssp SSEEEEEEEEEECTTSEEEEEEETTCCCEECC-EEECCTTCCHHHHHHHHHHHHHC
T ss_pred CCCCcEEEEEEEccCCEEEEEEEcCCCeEECC-eeecCCCCCHHHHHHHHHHHHHC
Confidence 45899999999999999999984449999987 79999999999999999999954
No 16
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=98.89 E-value=2.7e-09 Score=77.55 Aligned_cols=55 Identities=13% Similarity=-0.040 Sum_probs=47.7
Q ss_pred ccEEEEEEEEEcCCCcEEEEe----ecCCCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 120 LLHRAFSVFLFNSKYELLLQV----CLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 120 LlHRAfsVfLFNs~GeLLLQq----~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
.-|+.+.++|++.+|++||+| ..+||+|+.- ||++..||+..+||.||+.||-+.
T Consensus 6 ~~~~~~~~~ii~~~~~vLl~~r~~~~~~~g~w~lP-gG~ve~gE~~~~aa~RE~~EE~Gl 64 (140)
T 2rrk_A 6 MKMIEVVAAIIERDGKILLAQRPAQSDQAGLWEFA-GGKVEPDESQRQALVRELREELGI 64 (140)
T ss_dssp SCEEEEEEEEEEETTEEEEEECCSSCSCCCCEECC-EEECCTTSCHHHHHHHHHHHHSCE
T ss_pred CccceEEEEEEEcCCEEEEEEcCCCCCCCCEEECC-ceecCCCCCHHHHHHHHHHHHHCC
Confidence 457888888888899999987 4589999986 899999999999999999999553
No 17
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=98.88 E-value=1.7e-09 Score=80.81 Aligned_cols=56 Identities=13% Similarity=-0.009 Sum_probs=49.5
Q ss_pred CccEEEEEEEEEcCCCcEEEEe---ecCCCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 119 NLLHRAFSVFLFNSKYELLLQV---CLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 119 GLlHRAfsVfLFNs~GeLLLQq---~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
.-.++++.++|+|.+|++||+| ..++|.|..- |||+..||+..+||.||+.||-++
T Consensus 17 ~~~~~~v~~~i~~~~~~vLl~~r~~~~~~~~w~~P-gG~ve~gE~~~~aa~REl~EEtGl 75 (156)
T 3gg6_A 17 KNVCYVVLAVFLSEQDEVLLIQEAKRECRGSWYLP-AGRMEPGETIVEALQREVKEEAGL 75 (156)
T ss_dssp TTCEEEEEEECBCTTSEEEEEECCCTTSTTCEECS-EEECCTTCCHHHHHHHHHHHHHCE
T ss_pred CceEEEEEEEEEeCCCEEEEEEecCCCCCCEEECC-eeeccCCCCHHHHHHHHHHHhhCc
Confidence 4578899999999999999988 4469999986 999999999999999999999654
No 18
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=98.87 E-value=1.6e-09 Score=81.43 Aligned_cols=56 Identities=14% Similarity=0.022 Sum_probs=49.1
Q ss_pred CCccEEEEEEEEEcCCCcEEEEe----ecCCCceecccccCcCCCCCHHHHHHhhhhccCc
Q 030138 118 LNLLHRAFSVFLFNSKYELLLQV----CLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNI 174 (182)
Q Consensus 118 ~GLlHRAfsVfLFNs~GeLLLQq----~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~ 174 (182)
....|+++.++|++.+|++||+| ..|+|+|..- ||++..||+..+||.||+.||-+
T Consensus 25 ~~~~~~~~~~~i~~~~~~vLL~~r~~~~~~~g~w~~P-gG~ve~gE~~~~aa~RE~~EEtG 84 (158)
T 3hhj_A 25 KSSLLIVVACALLDQDNRVLLTQRPEGKSLAGLWEFP-GGKVEQGETPEASLIRELEEELG 84 (158)
T ss_dssp --CEEEEEEEEEBCTTSEEEEEECCCTTSCCCCCBCC-EEECCTTCCHHHHHHHHHHHHHC
T ss_pred CCceEEEEEEEEEeCCCEEEEEEeCCCCCCCCEEECC-ceeecCCCCHHHHHHHHHHHHhC
Confidence 34579999999999999999998 5589999995 99999999999999999999854
No 19
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=98.83 E-value=4.5e-09 Score=77.21 Aligned_cols=53 Identities=8% Similarity=-0.081 Sum_probs=46.8
Q ss_pred EEEEEEEEEcCCCcEEEEe----ecCCCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 122 HRAFSVFLFNSKYELLLQV----CLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 122 HRAfsVfLFNs~GeLLLQq----~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
|+.+.++|++.+|++||+| ..++|+|..- |||+..||+..+||.||+.||-++
T Consensus 21 ~~~~~~~i~~~~~~vLl~~r~~~~~~~g~w~~P-gG~ve~gE~~~~aa~RE~~EE~Gl 77 (153)
T 3ees_A 21 WIPVVAGFLRKDGKILVGQRPENNSLAGQWEFP-GGKIENGETPEEALARELNEELGI 77 (153)
T ss_dssp EEEEEEEEEEETTEEEEEECCTTSTTTTCEECS-EEECCTTCCHHHHHHHHHHHHHSC
T ss_pred eEEEEEEEEEECCEEEEEEeCCCCCCCCeEECC-ceeeCCCCCHHHHHHHHHHHHHCC
Confidence 7778888888889999987 4689999996 899999999999999999998653
No 20
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=98.82 E-value=3.5e-09 Score=77.36 Aligned_cols=52 Identities=8% Similarity=-0.040 Sum_probs=44.8
Q ss_pred EEEEEEEEEcCC-CcEEEEe-ecCCCceecccccCcCCCCCHHHHHHhhhhccCc
Q 030138 122 HRAFSVFLFNSK-YELLLQV-CLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNI 174 (182)
Q Consensus 122 HRAfsVfLFNs~-GeLLLQq-~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~ 174 (182)
+.++.++|+|.+ |++||+| ...||+|+.- |||+..||+..+||.||+.||-+
T Consensus 9 ~~~v~~~i~~~~~~~vLl~~r~~~~g~w~~P-gG~ve~gE~~~~aa~RE~~EEtG 62 (150)
T 2o1c_A 9 PVSILVVIYAQDTKRVLMLQRRDDPDFWQSV-TGSVEEGETAPQAAMREVKEEVT 62 (150)
T ss_dssp SEEEEEEEEETTTCEEEEEECSSSTTCEESE-EEECCTTCCHHHHHHHHHHHHHC
T ss_pred ceEEEEEEEeCCCCEEEEEEecCCCCceECC-ccccCCCCCHHHHHHHHHHHHhC
Confidence 468999999985 9998888 3339999985 99999999999999999999843
No 21
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=98.82 E-value=4.3e-09 Score=84.14 Aligned_cols=57 Identities=14% Similarity=-0.029 Sum_probs=47.4
Q ss_pred CCccEEEEEEEE-EcCCCcEEEEe-ecCCCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 118 LNLLHRAFSVFL-FNSKYELLLQV-CLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 118 ~GLlHRAfsVfL-FNs~GeLLLQq-~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
.+..+++..|++ .+.+|++||+| ..+||+|..- ||++..||+..+||+|||.||-++
T Consensus 37 ~~~~~~~~~vi~~~~~~~~vLLv~r~~~~g~W~lP-gG~ve~gEt~~eaa~REl~EEtGl 95 (194)
T 2fvv_A 37 DGYKKRAACLCFRSESEEEVLLVSSSRHPDRWIVP-GGGMEPEEEPSVAAVREVCEEAGV 95 (194)
T ss_dssp TSCEEEEEEEEESSTTCCEEEEEECSSCTTSEECS-EEECCTTCCHHHHHHHHHHHHHCE
T ss_pred CCccccEEEEEEEECCCCEEEEEEEeCCCCcEECC-CCcCCCCcCHHHHHHHHHHHHhCC
Confidence 466677776666 35678999988 5579999986 999999999999999999999764
No 22
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=98.81 E-value=4.1e-09 Score=79.43 Aligned_cols=54 Identities=17% Similarity=-0.040 Sum_probs=47.0
Q ss_pred ccEEEEEEEEEcCCCcEEEEeecCCCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 120 LLHRAFSVFLFNSKYELLLQVCLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 120 LlHRAfsVfLFNs~GeLLLQq~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
..|.++.++|++ +|++||+|...+|.|..- ||++..||+..+||.||+.||-++
T Consensus 4 ~~~~~v~~vi~~-~~~vLL~~r~~~g~w~lP-gG~ve~gEs~~~aa~REl~EEtGl 57 (159)
T 3f6a_A 4 NRHFTVSVFIVC-KDKVLLHLHKKAKKMLPL-GGHIEVNELPEEACIREAKEEAGL 57 (159)
T ss_dssp CSCEEEEEEEEE-TTEEEEEECSSSCCEECE-EEECCTTCCHHHHHHHHHHHHHCC
T ss_pred cceEEEEEEEEE-CCEEEEEEcCCCCeEECC-ccCccCCCCHHHHHHHHHHHHhCC
Confidence 469999999999 789999884458999655 999999999999999999999554
No 23
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=98.79 E-value=3.4e-09 Score=75.80 Aligned_cols=52 Identities=8% Similarity=-0.129 Sum_probs=42.7
Q ss_pred EEEEEEEEEcCCCcEEEEe----ecCCCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 122 HRAFSVFLFNSKYELLLQV----CLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 122 HRAfsVfLFNs~GeLLLQq----~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
|.++ ++|++.+|++||+| ..++|+|+. .||++..||+..+||.||+.||-+.
T Consensus 5 ~~~~-~ii~~~~~~vLl~~r~~~~~~~g~w~~-PgG~~e~gE~~~~aa~RE~~EE~G~ 60 (129)
T 1mut_A 5 QIAV-GIIRNENNEIFITRRAADAHMANKLEF-PGGKIEMGETPEQAVVRELQEEVGI 60 (129)
T ss_dssp ECCC-EECEETTTEEEEEECSSCCSSSCCEEC-CCCCSSSCSSTTHHHHHHHHTTTCC
T ss_pred EEEE-EEEEecCCEEEEEEeCCCCCCCCeEEC-CccCcCCCCCHHHHHHHHHHHHhCC
Confidence 3344 34568889999887 468999998 5999999999999999999998543
No 24
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=98.79 E-value=6.1e-09 Score=76.71 Aligned_cols=51 Identities=6% Similarity=-0.199 Sum_probs=41.5
Q ss_pred EEEEEEEEEcCCCcEEEEe----ec--CCCceecccccCcCCCCCHHHHHHhhhhccCc
Q 030138 122 HRAFSVFLFNSKYELLLQV----CL--FCILWVKTCLSMDCHWVVQICGLTWEMTDSNI 174 (182)
Q Consensus 122 HRAfsVfLFNs~GeLLLQq----~~--fPglWDnTcgGHplaGEs~~eAA~REl~ee~~ 174 (182)
.+++.++|++ +|++||+| .. +||+|..- ||++..||+..+||.||+.||-+
T Consensus 6 ~~~v~~vi~~-~~~vLL~~r~~~~~~~~~g~w~lP-gG~ve~gE~~~~aa~REl~EE~G 62 (140)
T 3gwy_A 6 IEVVAAVIRL-GEKYLCVQRGQTKFSYTSFRYEFP-GGKVEEGESLQEALQREIMEEMD 62 (140)
T ss_dssp EEEEEEEEEE-TTEEEEEEC---------CCEECS-EEECCTTCCHHHHHHHHHHHHHC
T ss_pred EEEEEEEEEe-CCEEEEEEecCCCCCCCCCeEECC-CccCCCCCCHHHHHHHHHHHhhC
Confidence 4567778887 79998888 22 99999998 89999999999999999999854
No 25
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=98.78 E-value=9.1e-09 Score=78.25 Aligned_cols=57 Identities=7% Similarity=-0.169 Sum_probs=49.5
Q ss_pred CCccEEEEEEEEEcCC-CcEEEEe---ecCCCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 118 LNLLHRAFSVFLFNSK-YELLLQV---CLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 118 ~GLlHRAfsVfLFNs~-GeLLLQq---~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
....|.++.++|+|.+ |++||+| ..|+|+|.. .||++..||+..+||.||+.||-++
T Consensus 6 ~~~~~~~v~~vi~~~~~~~vLL~~r~~~~~~g~w~l-PgG~ve~gEs~~~aa~REl~EEtGl 66 (161)
T 3exq_A 6 TQPVELVTMVMVTDPETQRVLVEDKVNVPWKAGHSF-PGGHVEVGEPCATAAIREVFEETGL 66 (161)
T ss_dssp CCCEEEEEEEEEBCTTTCCEEEECCCCCTTTCSBBC-CCCBCCTTSCHHHHHHHHHHHHHCC
T ss_pred cCCceEEEEEEEEeCCCCEEEEEEccCCCCCCCEEc-cceecCCCCCHHHHHHHHHHHhhCc
Confidence 4568999999999988 8988887 668999966 5999999999999999999999543
No 26
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=98.78 E-value=4.3e-09 Score=87.51 Aligned_cols=64 Identities=9% Similarity=-0.088 Sum_probs=49.3
Q ss_pred hhhccccCCccEEEEEEEEEcCCCcEEEEe---e----cCCCceecccccCcCCCCC--H----HHHHHhhhhccCce
Q 030138 111 LMEKIESLNLLHRAFSVFLFNSKYELLLQV---C----LFCILWVKTCLSMDCHWVV--Q----ICGLTWEMTDSNIL 175 (182)
Q Consensus 111 r~e~i~~~GLlHRAfsVfLFNs~GeLLLQq---~----~fPglWDnTcgGHplaGEs--~----~eAA~REl~ee~~~ 175 (182)
|++..+ .+.+|..+..+|++.+|++|++| . .++|.|.+..|||+.+||+ . .+||+|||.||-++
T Consensus 57 Rg~~e~-d~~~~q~i~~~II~~~grvLl~~R~~~~~e~~~~g~w~~gPGGhVE~GEs~~p~EtleeAa~REl~EEtGl 133 (211)
T 3e57_A 57 RDEAEY-DETTKQVIPYVVIMDGDRVLITKRTTKQSEKRLHNLYSLGIGGHVREGDGATPREAFLKGLEREVNEEVDV 133 (211)
T ss_dssp HHHHTT-CTTEEEEEEEEEEEETTEEEEEEC------------CBSSEECCCBGGGCSSHHHHHHHHHHHHHHHHEEE
T ss_pred cccccc-CCcccceEEEEEEEECCEEEEEEECCCCCcccccCCcccccceEEeCCCCCCchhhHHHHHHHHHHHHhCC
Confidence 444444 67888888888888899988888 1 3779999999999999999 4 99999999999776
No 27
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=98.77 E-value=9.7e-09 Score=79.14 Aligned_cols=52 Identities=12% Similarity=-0.171 Sum_probs=45.7
Q ss_pred EEEEEEEEcCCCcEEEEe----ecCCCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 123 RAFSVFLFNSKYELLLQV----CLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 123 RAfsVfLFNs~GeLLLQq----~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
.++.|+++|.+|++||+| ..++|+|+.- |||+..||+..+||.||+.||-++
T Consensus 42 ~~v~v~i~~~~~~vLL~~r~~~~~~~~~w~~P-gG~ve~gEs~~~aa~REl~EEtGl 97 (182)
T 2yvp_A 42 AASFVLPVTERGTALLVRQYRHPTGKFLLEVP-AGKVDEGETPEAAARRELREEVGA 97 (182)
T ss_dssp EEEEEEEBCTTSEEEEEEEEEGGGTEEEEECC-EEECCTTCCHHHHHHHHHHHHHCE
T ss_pred CEEEEEEEcCCCEEEEEEeccCCCCCcEEEec-cccCCCCcCHHHHHHHHHHHHhCC
Confidence 589999999999988887 2378999986 899999999999999999999553
No 28
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=98.76 E-value=1.1e-08 Score=77.38 Aligned_cols=56 Identities=7% Similarity=-0.125 Sum_probs=48.3
Q ss_pred CCccEEEEEEEEEcCCCcEEEEe---ecCCCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 118 LNLLHRAFSVFLFNSKYELLLQV---CLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 118 ~GLlHRAfsVfLFNs~GeLLLQq---~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
....|.++.++|++ +|++||+| ..++|+|..- ||++..||+..+||.||+.||-++
T Consensus 25 ~~~~~~~v~~vi~~-~~~vLL~~r~~~~~~~~w~lP-gG~ve~gEs~~~aa~REl~EEtGl 83 (157)
T 4dyw_A 25 TEQPRVGCGAAIVR-DGRILLIKRKRAPEAGCWGLP-GGKVDWLEPVERAVCREIEEELGI 83 (157)
T ss_dssp -CCCEEEEEEEEEE-TTEEEEEEECSSSSTTCEECC-EEECCTTCCHHHHHHHHHHHHHSC
T ss_pred CCCceeEEEEEEEE-CCEEEEEEecCCCCCCEEECC-cccCCCCCCHHHHHHHHHHHHHCc
Confidence 35579999999999 79998888 2389999987 899999999999999999999553
No 29
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=98.76 E-value=5.7e-09 Score=76.98 Aligned_cols=53 Identities=13% Similarity=-0.035 Sum_probs=45.9
Q ss_pred EEEEEEEEEcCC-CcEEEEeecCCCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 122 HRAFSVFLFNSK-YELLLQVCLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 122 HRAfsVfLFNs~-GeLLLQq~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
.+++.++|++.+ |++||+|...+|+|..- |||+..||+..+||.||+.||-++
T Consensus 4 i~~~~~~i~~~~~~~vLl~~r~~~g~w~~P-gG~ve~gEs~~~aa~RE~~EEtGl 57 (146)
T 2jvb_A 4 IPVRGAAIFNENLSKILLVQGTESDSWSFP-RGKISKDENDIDCCIREVKEEIGF 57 (146)
T ss_dssp SCCEEEEEBCTTSSEEEEECCSSSSCCBCC-EECCCSSSCHHHHHHHHHHHHTSC
T ss_pred eEEEEEEEEeCCCCEEEEEEEcCCCcEECC-cccCCCCCCHHHHHHHHHHHHHCC
Confidence 356888999986 99999995568999985 999999999999999999998553
No 30
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=98.75 E-value=7.3e-09 Score=79.24 Aligned_cols=55 Identities=11% Similarity=-0.015 Sum_probs=46.9
Q ss_pred CccEE-EEEEEEEcCCCcEEEEe----ecCCCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 119 NLLHR-AFSVFLFNSKYELLLQV----CLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 119 GLlHR-AfsVfLFNs~GeLLLQq----~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
...|+ ++.|+++| +|++||.| ..+||+|+.- |||+..||+..+||.||+.||-++
T Consensus 30 ~~~~~~~v~vii~~-~~~vLL~~~~r~~~~~~~w~lP-gG~ve~gEs~~~aa~REl~EEtGl 89 (170)
T 1v8y_A 30 IVEHKPAVAVIALR-EGRMLFVRQMRPAVGLAPLEIP-AGLIEPGEDPLEAARRELAEQTGL 89 (170)
T ss_dssp EEEECCEEEEEEEE-TTEEEEEECCBTTTTBCCBBCS-EEECCTTCCHHHHHHHHHHHHHSE
T ss_pred EEecCCeEEEEEEE-CCEEEEEEEEeCCCCCCEEECC-ccccCCCCCHHHHHHHHHHHHHCC
Confidence 44566 99999999 89988765 3478999986 899999999999999999999654
No 31
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=98.75 E-value=7.3e-09 Score=75.29 Aligned_cols=54 Identities=13% Similarity=0.066 Sum_probs=45.7
Q ss_pred cEEEEEEEEEcC---CCcEEEEe-ecCCCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 121 LHRAFSVFLFNS---KYELLLQV-CLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 121 lHRAfsVfLFNs---~GeLLLQq-~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
.++++.++|++. ++++||+| ...||+|..- |||+..||+..+||.||+.||-++
T Consensus 2 ~~~~~~~vi~~~~~~~~~vLl~~r~~~~~~w~~P-gG~ve~gE~~~~aa~RE~~EEtGl 59 (138)
T 1ktg_A 2 VVKAAGLVIYRKLAGKIEFLLLQASYPPHHWTPP-KGHVDPGEDEWQAAIRETKEEANI 59 (138)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEEESSTTCCEESS-EEECCTTCCHHHHHHHHHHHHHCC
T ss_pred ceEEEEEEEEEecCCCcEEEEEEccCCCCcEeCC-ccccCCCCCHHHHHHHHHHHHHCC
Confidence 368899999987 46888887 5467899985 999999999999999999998443
No 32
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=98.72 E-value=1.1e-08 Score=79.85 Aligned_cols=55 Identities=13% Similarity=-0.158 Sum_probs=42.8
Q ss_pred CCccEEEEEEEEEcCCC--cEEEEe-----ecCCCceecccccCcCCCCCHHHHHHhhhhccCc
Q 030138 118 LNLLHRAFSVFLFNSKY--ELLLQV-----CLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNI 174 (182)
Q Consensus 118 ~GLlHRAfsVfLFNs~G--eLLLQq-----~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~ 174 (182)
.+..|.++.|++ +.+| ++||+| ..+||+|+.- |||+..||+..+||.||+.||-+
T Consensus 31 ~~~~~~~~~v~i-~~~~~~~vLL~~r~~~~~~~~g~w~lP-gG~ve~gEs~~~aa~REl~EEtG 92 (194)
T 1nqz_A 31 PHYRRAAVLVAL-TREADPRVLLTVRSSELPTHKGQIAFP-GGSLDAGETPTQAALREAQEEVA 92 (194)
T ss_dssp --CEEEEEEEEE-ESSSSCBBCEEEEC------CCCEECS-EEECCTTCCHHHHHHHHHHHHHC
T ss_pred CCCceEEEEEEE-ecCCCeEEEEEEecCCCCCCCCeEECC-cccCCCCCCHHHHHHHHHHHHHC
Confidence 466777776666 8888 887777 2489999975 89999999999999999999854
No 33
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=98.72 E-value=8.9e-09 Score=76.77 Aligned_cols=53 Identities=6% Similarity=-0.150 Sum_probs=47.1
Q ss_pred CCccEEEEEEEEEcCCCcEEEEeecCCCceecccccCcCCCCCHHHHHHhhhhccCc
Q 030138 118 LNLLHRAFSVFLFNSKYELLLQVCLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNI 174 (182)
Q Consensus 118 ~GLlHRAfsVfLFNs~GeLLLQq~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~ 174 (182)
...+|.++.++|++ +|++||+|. +|.|.. .|||+..||+..+||.||+.||-+
T Consensus 15 ~~~~~~~~~~ii~~-~~~vLl~~r--~~~w~l-PgG~ve~gE~~~~aa~REl~EEtG 67 (154)
T 2pqv_A 15 NTVFGVRATALIVQ-NHKLLVTKD--KGKYYT-IGGAIQVNESTEDAVVREVKEELG 67 (154)
T ss_dssp TEEEEEEEEECCEE-TTEEEEEEE--TTEEEC-EEEECBTTCCHHHHHHHHHHHHHC
T ss_pred CceEeEEEEEEEEE-CCEEEEEec--CCeEEC-cccCcCCCCCHHHHHHHHHHHHhC
Confidence 35688899999997 689999887 999998 699999999999999999999854
No 34
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=98.71 E-value=1.6e-08 Score=78.72 Aligned_cols=54 Identities=15% Similarity=0.046 Sum_probs=47.0
Q ss_pred cEEEEEEEEEcCCCcEEEEe---ecCCCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 121 LHRAFSVFLFNSKYELLLQV---CLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 121 lHRAfsVfLFNs~GeLLLQq---~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
-|+++.++|++.+|++||+| ..++|+|..- ||++..||+..+||.||+.||-++
T Consensus 23 ~~~~~~~~vi~~~~~vLL~~r~~~~~~g~W~lP-gG~ve~gEs~~~aa~REl~EEtGl 79 (176)
T 3q93_A 23 ASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGF-GGKVQEGETIEDGARRELQEESGL 79 (176)
T ss_dssp CEEEEEEEEEECSSEEEEEEECSSTTTTSEECE-EEECCTTSCHHHHHHHHHHHHHSC
T ss_pred CCcEEEEEEEEeCCEEEEEEEcCCCCCCeEECc-eecCCCCCCHHHHHHHHHHHHHCC
Confidence 48888888888999999886 4579999776 899999999999999999998543
No 35
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=98.70 E-value=1.9e-08 Score=74.84 Aligned_cols=54 Identities=6% Similarity=-0.167 Sum_probs=44.9
Q ss_pred CccEEEEEEEEEcCCCc----EEEEe---ecCCCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 119 NLLHRAFSVFLFNSKYE----LLLQV---CLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 119 GLlHRAfsVfLFNs~Ge----LLLQq---~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
...|.++.++|++ +|+ +|+|+ ..||| |.. .|||+..||+..+||.||+.||-+.
T Consensus 5 ~~~~~~~~~ii~~-~~~~~~~vLl~~r~~~~~~g-w~l-PgG~ve~gE~~~~aa~RE~~EEtGl 65 (155)
T 2b06_A 5 QLTILTNICLIED-LETQRVVMQYRAPENNRWSG-YAF-PGGHVENDEAFAESVIREIYEETGL 65 (155)
T ss_dssp GCEEEEEEEEEEE-TTTTEEEEEEEC-----CCE-EEC-CCCBCCTTSCHHHHHHHHHHHHHSE
T ss_pred cCcEEEEEEEEEE-CCCCeEEEEEEECCCCCCCC-Eec-cceecCCCCCHHHHHHHHHHHHhCc
Confidence 4578999999998 566 99987 34888 976 6999999999999999999999653
No 36
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=98.70 E-value=2.6e-08 Score=71.29 Aligned_cols=50 Identities=18% Similarity=0.019 Sum_probs=43.8
Q ss_pred EEEEEEEEcCCCcEEEEeecCCCceecccccCcCCCCCHHHHHHhhhhccCc
Q 030138 123 RAFSVFLFNSKYELLLQVCLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNI 174 (182)
Q Consensus 123 RAfsVfLFNs~GeLLLQq~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~ 174 (182)
.++.++|+|.+|++||+|... |+|+.- |||+..||+..+||.||+.||-+
T Consensus 3 ~~~~~vi~~~~~~vLl~~r~~-g~w~~P-gG~ve~gE~~~~aa~RE~~EE~G 52 (126)
T 1vcd_A 3 LGAGGVVFNAKREVLLLRDRM-GFWVFP-KGHPEPGESLEEAAVREVWEETG 52 (126)
T ss_dssp EEEEEEEECTTSCEEEEECTT-SCEECC-EECCCTTCCHHHHHHHHHHHHHC
T ss_pred eEEEEEEEcCCCEEEEEEECC-CCccCC-cCcCCCCCCHHHHHHHHHHHhhC
Confidence 368899999999999998332 999986 99999999999999999999854
No 37
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=98.69 E-value=1.8e-08 Score=76.04 Aligned_cols=51 Identities=14% Similarity=-0.022 Sum_probs=44.7
Q ss_pred EEEEEEEEcCCCcEEEEeecCCCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 123 RAFSVFLFNSKYELLLQVCLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 123 RAfsVfLFNs~GeLLLQq~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
.++.++|++ +|++||+|...+|+|+.- |||+..||+..+||.||+.||-++
T Consensus 2 ~~~~~vi~~-~~~vLL~~r~~~g~W~lP-gG~ve~gEs~~~aa~REl~EEtGl 52 (156)
T 1k2e_A 2 IVTSGVLVE-NGKVLLVKHKRLGVYIYP-GGHVEHNETPIEAVKREFEEETGI 52 (156)
T ss_dssp EEEEEECEE-TTEEEEEECTTTCSEECS-EEECCTTCCHHHHHHHHHHHHHSE
T ss_pred eEEEEEEEE-CCEEEEEEEcCCCcEECC-eeecCCCCCHHHHHHHHHHHHHCC
Confidence 467888998 899999985559999986 999999999999999999999654
No 38
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=98.68 E-value=1.8e-08 Score=74.77 Aligned_cols=51 Identities=12% Similarity=-0.035 Sum_probs=43.1
Q ss_pred EEEEEEE---cCCCcEEEEeecCCCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 124 AFSVFLF---NSKYELLLQVCLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 124 AfsVfLF---Ns~GeLLLQq~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
++.|++| |.+|++||+|...+|+|..- |||+..||+..+||.||+.||-++
T Consensus 7 ~v~vvi~~~~~~~~~vLl~~r~~~g~w~~P-gG~ve~gE~~~~aa~REl~EEtGl 60 (149)
T 3son_A 7 QVLVIPFIKTEANYQFGVLHRTDADVWQFV-AGGGEDEEAISETAKRESIEELNL 60 (149)
T ss_dssp EEEEEEEEECSSSEEEEEEEESSSSCEECE-EEECCTTCCHHHHHHHHHHHHHTC
T ss_pred EEEEEEEEecCCCeEEEEEEEcCCCCEeCC-ccccCCCCCHHHHHHHHHHHHhCC
Confidence 4667776 67789999995557999976 999999999999999999999653
No 39
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=98.66 E-value=2.7e-08 Score=72.96 Aligned_cols=53 Identities=9% Similarity=-0.234 Sum_probs=44.9
Q ss_pred cEEEEEEEEEc--CCCc--EEEEe-ecCCCceecccccCcCCCCCHHHHHHhhhhccCc
Q 030138 121 LHRAFSVFLFN--SKYE--LLLQV-CLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNI 174 (182)
Q Consensus 121 lHRAfsVfLFN--s~Ge--LLLQq-~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~ 174 (182)
.+.++.++|++ .+|+ +||+| ...|+.|..- |||+..||+..+||.||+.||-+
T Consensus 8 p~~~v~~vi~~~~~~~~~~vLl~~r~~~~~~w~~P-gG~ve~gE~~~~aa~RE~~EEtG 65 (139)
T 2yyh_A 8 PLLATDVIIRLWDGENFKGIVLIERKYPPVGLALP-GGFVEVGERVEEAAAREMREETG 65 (139)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEEEECSSSCSEECC-EEECCTTCCHHHHHHHHHHHHHC
T ss_pred CeEEEEEEEEEEcCCCcEEEEEEEecCCCCcEECc-cccCCCCCCHHHHHHHHHHHHHC
Confidence 46778888887 7888 88887 5568889985 99999999999999999999854
No 40
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=98.65 E-value=2.5e-08 Score=74.01 Aligned_cols=51 Identities=10% Similarity=-0.021 Sum_probs=42.6
Q ss_pred EEEEEEEEEcCCCcEEEEe--ecCCCceecccccCcCCCCCHHHHHHhhhhccCc
Q 030138 122 HRAFSVFLFNSKYELLLQV--CLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNI 174 (182)
Q Consensus 122 HRAfsVfLFNs~GeLLLQq--~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~ 174 (182)
|.++.+++.+ +|++||+| ...+|.|..- |||+..||+..+||.||+.||-+
T Consensus 5 ~~~v~~ii~~-~~~vLl~~r~~~~~~~w~~P-gG~ve~gEs~~~aa~REl~EEtG 57 (153)
T 3shd_A 5 HVTVACVVHA-EGKFLVVEETINGKALWNQP-AGHLEADETLVEAAARELWEETG 57 (153)
T ss_dssp EEEEEEEEEE-TTEEEEEEEEETTEEEEECS-EEECCTTCCHHHHHHHHHHHHHC
T ss_pred ceEEEEEEEe-CCEEEEEEecCCCCCCEECC-eEEeCCCCCHHHHHHHHHHHHHC
Confidence 5566666654 78988887 5688999987 89999999999999999999954
No 41
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=98.62 E-value=2.1e-08 Score=75.01 Aligned_cols=52 Identities=12% Similarity=-0.150 Sum_probs=42.8
Q ss_pred EEEEEEEEcCCCcEEEE-e-e--cCCCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 123 RAFSVFLFNSKYELLLQ-V-C--LFCILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 123 RAfsVfLFNs~GeLLLQ-q-~--~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
-++.|+++|.+|++||. | . ..+++|..- |||+..||+..+||+||+.||-++
T Consensus 6 ~~v~vi~~~~~~~vLLv~~~r~~~~~~~w~~P-gG~ve~gEt~~~aa~REl~EEtGl 61 (145)
T 2w4e_A 6 RAVFILPVTAQGEAVLIRQFRYPLRATITEIV-AGGVEKGEDLGAAAARELLEEVGG 61 (145)
T ss_dssp EEEEEEEEETTSEEEEEEEEETTTTEEEEECE-EEECCTTCCHHHHHHHHHHHHHCE
T ss_pred CEEEEEEEcCCCEEEEEEEEecCCCCCEEEeC-CccCCCCCCHHHHHHHHHHHhhCC
Confidence 48999999999998664 3 2 235589975 899999999999999999999654
No 42
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=98.62 E-value=5.2e-08 Score=70.23 Aligned_cols=51 Identities=14% Similarity=-0.076 Sum_probs=43.2
Q ss_pred EEEEEEEEEcCCCcEEEEeecCCCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 122 HRAFSVFLFNSKYELLLQVCLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 122 HRAfsVfLFNs~GeLLLQq~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
+.++.++|+| +|++||+|..- |+|..- |||+..||+..+||.||+.||-++
T Consensus 4 ~~~~~~vi~~-~~~vLl~~r~~-~~w~~P-gG~ve~gE~~~~aa~RE~~EE~Gl 54 (134)
T 2pbt_A 4 EFSAGGVLFK-DGEVLLIKTPS-NVWSFP-KGNIEPGEKPEETAVREVWEETGV 54 (134)
T ss_dssp EEEEEEEEEE-TTEEEEEECTT-SCEECC-EEECCTTCCHHHHHHHHHHHHHSE
T ss_pred ceEEEEEEEE-CCEEEEEEeCC-CcEECC-ccccCCCCCHHHHHHHHHHHHHCC
Confidence 5678889998 68999988322 999876 899999999999999999999653
No 43
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=98.62 E-value=3.3e-08 Score=74.53 Aligned_cols=52 Identities=17% Similarity=0.088 Sum_probs=42.5
Q ss_pred EEEEEEEE---------cCCCcEEEEe-ecCCCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 123 RAFSVFLF---------NSKYELLLQV-CLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 123 RAfsVfLF---------Ns~GeLLLQq-~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
||+.++|| |.++++||.| ..-||.|..- |||+..||+..+||.||+.||-++
T Consensus 4 ra~G~iifr~~~~~~~~n~~~e~LL~~r~~~~~~W~lP-gG~ve~gEt~~~aa~REl~EEtGl 65 (155)
T 3u53_A 4 RACGLIIFRRCLIPKVDNNAIEFLLLQASDGIHHWTPP-KGHVEPGEDDLETALRETQEEAGI 65 (155)
T ss_dssp CEEEEEEEEECCCSSSSSCSEEEEEEEESSSSCCEECS-EEECCSSCCHHHHHHHHHHHHHCC
T ss_pred eEeEEEEEccccccceeCCCcEEEEEEecCCCCCEECC-eeeccCCCCHHHHHHHHHHHHHCC
Confidence 56777877 5666766666 4458999986 999999999999999999999653
No 44
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=98.57 E-value=4.9e-08 Score=71.45 Aligned_cols=54 Identities=6% Similarity=-0.155 Sum_probs=46.3
Q ss_pred ccEEEEEEEEEcC-CCcEEEEeecCCCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 120 LLHRAFSVFLFNS-KYELLLQVCLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 120 LlHRAfsVfLFNs-~GeLLLQq~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
..|.++.++|+|. +|++||+|. -+|+|+.- ||++..||+..+||.||+.||-++
T Consensus 16 ~~~~~~~~vi~~~~~~~vLl~~r-~~g~w~~P-gG~ve~gE~~~~aa~RE~~EEtGl 70 (148)
T 2azw_A 16 QTRYAAYIIVSKPENNTMVLVQA-PNGAYFLP-GGEIEGTETKEEAIHREVLEELGI 70 (148)
T ss_dssp EECCEEEEECEEGGGTEEEEEEC-TTSCEECS-EEECCTTCCHHHHHHHHHHHHHSE
T ss_pred eeeeEEEEEEECCCCCeEEEEEc-CCCCEeCC-CcccCCCCCHHHHHHHHHHHHhCC
Confidence 4677888999987 799999984 36999976 899999999999999999998543
No 45
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=98.55 E-value=9.7e-08 Score=72.44 Aligned_cols=56 Identities=14% Similarity=0.025 Sum_probs=45.5
Q ss_pred CCccEEEEEEEEEcCCCcEEEEe-ecCCCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 118 LNLLHRAFSVFLFNSKYELLLQV-CLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 118 ~GLlHRAfsVfLFNs~GeLLLQq-~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
...++.++.++|++ +|++||+| ..-+|+|..- ||++..||+..+||.||+.||-+.
T Consensus 19 ~~~~~~~v~~ii~~-~~~vLL~~r~~~~~~w~~P-gG~ve~gEs~~~aa~REl~EEtGl 75 (171)
T 3id9_A 19 ENIMQVRVTGILIE-DEKVLLVKQKVANRDWSLP-GGRVENGETLEEAMIREMREETGL 75 (171)
T ss_dssp ---CEEEEEEEEEE-TTEEEEEECSSTTCCEECC-EEECCTTCCHHHHHHHHHHHHHCC
T ss_pred CCceEEEEEEEEEE-CCEEEEEEEECCCCeEECC-CccCCCCCCHHHHHHHHHHHHHCC
Confidence 46788889999997 58988887 3239999887 899999999999999999999543
No 46
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=98.54 E-value=8.7e-08 Score=75.09 Aligned_cols=52 Identities=10% Similarity=-0.015 Sum_probs=44.2
Q ss_pred EEEEEEEEEcCCCcEEEEe---ecCCCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 122 HRAFSVFLFNSKYELLLQV---CLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 122 HRAfsVfLFNs~GeLLLQq---~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
..++.++|++ +|++||+| ..++|+|..- ||++..||+..+||.|||.||-++
T Consensus 40 ~~~v~~ii~~-~~~vLL~~r~~~~~~g~w~lP-gG~ve~gEs~~~aa~REl~EEtGl 94 (189)
T 3cng_A 40 KVIVGCIPEW-ENKVLLCKRAIAPYRGKWTLP-AGFMENNETLVQGAARETLEEANA 94 (189)
T ss_dssp EEEEEEEEEE-TTEEEEEEESSSSSTTCEECS-EEECCTTCCHHHHHHHHHHHHHCC
T ss_pred ceEEEEEEEe-CCEEEEEEccCCCCCCeEECc-eeeccCCCCHHHHHHHHHHHHHCC
Confidence 4578888888 78988887 2358999986 999999999999999999998543
No 47
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=98.53 E-value=7.2e-08 Score=76.13 Aligned_cols=53 Identities=8% Similarity=-0.038 Sum_probs=44.3
Q ss_pred EEEEEEEEEcC-CCcEEEEe--ecCCCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 122 HRAFSVFLFNS-KYELLLQV--CLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 122 HRAfsVfLFNs-~GeLLLQq--~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
+.++.++|++. +|++||+| ..++|.|..- ||++..||+..+||.||+.||-++
T Consensus 26 ~v~v~~~v~~~~~~~vLL~~r~~~~~g~w~lP-GG~ve~gEs~~~aA~REl~EEtGl 81 (199)
T 3h95_A 26 QVGVAGAVFDESTRKILVVQDRNKLKNMWKFP-GGLSEPEEDIGDTAVREVFEETGI 81 (199)
T ss_dssp CCEEEEEEEETTTTEEEEEEESSSSTTSBBCC-EEECCTTCCHHHHHHHHHHHHHCC
T ss_pred cceEEEEEEeCCCCEEEEEEEcCCCCCCEECC-ccccCCCCCHHHHHHHHHHHHhCC
Confidence 34577888876 58888887 5579999987 999999999999999999999543
No 48
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=98.50 E-value=1.1e-07 Score=70.16 Aligned_cols=52 Identities=10% Similarity=-0.110 Sum_probs=40.6
Q ss_pred EEEEEEEEEcCCCcEEEEe--e-cCCCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 122 HRAFSVFLFNSKYELLLQV--C-LFCILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 122 HRAfsVfLFNs~GeLLLQq--~-~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
+.++.+++ +.+|++||+| . ..+|+|..- |||+..||+..+||+||+.||-++
T Consensus 8 ~~~v~~ii-~~~~~vLl~~r~~~~~~~~w~lP-gG~ve~gE~~~~aa~RE~~EEtGl 62 (153)
T 2b0v_A 8 NVTVAAVI-EQDDKYLLVEEIPRGTAIKLNQP-AGHLEPGESIIQACSREVLEETGH 62 (153)
T ss_dssp EEEEEEEC-EETTEEEEEEECSSSSCCEEECS-EEECCTTSCHHHHHHHHHHHHHSE
T ss_pred CEEEEEEE-eeCCEEEEEEEcCCCCCCeEECC-CcCcCCCCCHHHHHHHHHHHhhCc
Confidence 34455555 4678988887 1 128899997 999999999999999999998543
No 49
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=98.50 E-value=1.5e-07 Score=74.18 Aligned_cols=52 Identities=12% Similarity=-0.015 Sum_probs=45.0
Q ss_pred EEEEEEEEEcCCCcEEEEeecCCCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 122 HRAFSVFLFNSKYELLLQVCLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 122 HRAfsVfLFNs~GeLLLQq~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
.+++.++|++ +|++||+|..++|+|..- ||++..||+..+||.||+.||-++
T Consensus 4 ~~v~~~vi~~-~~~vLL~~r~~~g~W~lP-GG~ve~gEs~~~aa~REl~EEtGl 55 (188)
T 3fk9_A 4 QRVTNCIVVD-HDQVLLLQKPRRGWWVAP-GGKMEAGESILETVKREYWEETGI 55 (188)
T ss_dssp CEEEEEEEEE-TTEEEEEECTTTCCEECC-EEECCTTCCHHHHHHHHHHHHHSC
T ss_pred eEEEEEEEEE-CCEEEEEEeCCCCeEECC-eecccCCCCHHHHHHHHHHHHHCC
Confidence 4677888887 689999886679999988 999999999999999999998543
No 50
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=98.49 E-value=9e-08 Score=78.23 Aligned_cols=54 Identities=9% Similarity=-0.079 Sum_probs=46.7
Q ss_pred ccEEEEEEEEE---cCCCcEEEEe---ecCCCceecccccCcCCCCCHHHHHHhhhhccCc
Q 030138 120 LLHRAFSVFLF---NSKYELLLQV---CLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNI 174 (182)
Q Consensus 120 LlHRAfsVfLF---Ns~GeLLLQq---~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~ 174 (182)
-.|.++.++|| |.++++||+| ..++|.|..- |||+..||+..+||+|||.||-+
T Consensus 11 ~p~v~v~~vi~~~~~~~~~vLLv~r~~~~~~g~w~lP-GG~ve~gEs~~~Aa~REl~EEtG 70 (226)
T 2fb1_A 11 TFYLGIDCIIFGFNEGEISLLLLKRNFEPAMGEWSLM-GGFVQKDESVDDAAKRVLAELTG 70 (226)
T ss_dssp CEEEEEEEEEEEEETTEEEEEEEECSSSSSTTCEECE-EEECCTTSCHHHHHHHHHHHHHC
T ss_pred CCeEEEEEEEEEEeCCCCEEEEEECcCCCCCCCEECC-eeccCCCCCHHHHHHHHHHHHHC
Confidence 36888999998 6778988887 4678999986 99999999999999999999944
No 51
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=98.47 E-value=8.4e-08 Score=76.51 Aligned_cols=52 Identities=10% Similarity=-0.018 Sum_probs=45.0
Q ss_pred EEEEEEEEcCCCcEEEEe----ecCCCceecccccCcC-CCCCHHHHHHhhhhccCce
Q 030138 123 RAFSVFLFNSKYELLLQV----CLFCILWVKTCLSMDC-HWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 123 RAfsVfLFNs~GeLLLQq----~~fPglWDnTcgGHpl-aGEs~~eAA~REl~ee~~~ 175 (182)
.++.|+++|.+|++||.| ..++|+|..- |||+. .||+..+||.|||.||-++
T Consensus 44 ~av~v~i~~~~~~vLLvrr~r~~~~~~~w~lP-gG~ve~~gEs~~~aa~REl~EEtGl 100 (207)
T 1mk1_A 44 GAVAIVAMDDNGNIPMVYQYRHTYGRRLWELP-AGLLDVAGEPPHLTAARELREEVGL 100 (207)
T ss_dssp CEEEEEECCTTSEEEEEEEEETTTTEEEEECC-EEECCSTTCCHHHHHHHHHHHHHCE
T ss_pred CEEEEEEEcCCCEEEEEEeecCCCCCcEEEeC-CccccCCCCCHHHHHHHHHHHHHCC
Confidence 589999999999988876 3367899985 89999 9999999999999999654
No 52
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=98.47 E-value=2.2e-07 Score=69.57 Aligned_cols=51 Identities=14% Similarity=-0.067 Sum_probs=42.9
Q ss_pred EEEEEEEEEcCCCcEEEEeecCCCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 122 HRAFSVFLFNSKYELLLQVCLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 122 HRAfsVfLFNs~GeLLLQq~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
|.++.++|++. |++||+|. -.|.|..- |||+..||+..+||.||+.||-++
T Consensus 4 ~~aag~vv~~~-~~vLL~~r-~~g~W~~P-gG~ve~gEt~~~aa~RE~~EEtGl 54 (134)
T 3i7u_A 4 EFSAGGVLFKD-GEVLLIKT-PSNVWSFP-KGNIEPGEKPEETAVREVWEETGV 54 (134)
T ss_dssp EEEEEEEEEET-TEEEEEEC-TTSCEECC-EEECCTTCCHHHHHHHHHHHHHSE
T ss_pred EEEEEEEEEEC-CEEEEEEe-CCCcEECC-eeEecCCCCHHHHHHHHHHHhcCc
Confidence 66788888874 78888773 25899986 999999999999999999999654
No 53
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=98.44 E-value=1.4e-07 Score=73.40 Aligned_cols=56 Identities=11% Similarity=-0.049 Sum_probs=46.6
Q ss_pred CccEEEEEEEEEcC-------CCcEEEEee----------cCCCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 119 NLLHRAFSVFLFNS-------KYELLLQVC----------LFCILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 119 GLlHRAfsVfLFNs-------~GeLLLQq~----------~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
.-.|.++.|+||.- ++++||+|. .++|.|..- ||++..||+..+||.||+.||-++
T Consensus 24 ~p~~~~v~~vv~~~~~~~~~~~~~vLL~~r~~~~~~g~~~~~~g~w~lP-GG~ve~gEs~~~aa~REl~EEtGl 96 (187)
T 3i9x_A 24 TPDGYTSDMILTTVKELNGKPTLHILLIKRSLTNAEGKPNMEGGKWAVP-GGFVDENESAEQAAERELEEETSL 96 (187)
T ss_dssp CCSEEEEEEEEEEEEEETTEEEEEEEEEECCSBCTTSSBCTTTTCEECS-EEECCTTSCHHHHHHHHHHHHHCC
T ss_pred CcccceEEEEEEEEcCCCCCCCCEEEEEEEccccccccCCCCCCEEECC-ceeCCCCCCHHHHHHHHHHHHHCC
Confidence 45678888888762 357888773 689999998 999999999999999999999654
No 54
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=98.44 E-value=2.9e-07 Score=72.71 Aligned_cols=53 Identities=11% Similarity=-0.044 Sum_probs=43.6
Q ss_pred cEEEEEEEEEcC-CCcEEEEe-ec---------CCCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 121 LHRAFSVFLFNS-KYELLLQV-CL---------FCILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 121 lHRAfsVfLFNs-~GeLLLQq-~~---------fPglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
.|.++.|+++|. +|++||.+ .. .++.|..- ||++. ||+..+||.|||.||-+.
T Consensus 44 ~~~av~v~~~~~~~~~vlLv~~~r~~~~~~~~~~~~~w~lP-gG~ve-gE~~~~aa~REl~EEtG~ 107 (191)
T 3o6z_A 44 RGNGATILLYNTKKKTVVLIRQFRVATWVNGNESGQLIESC-AGLLD-NDEPEVCIRKEAIEETGY 107 (191)
T ss_dssp CCCEEEEEEEETTTTEEEEEEEECHHHHTTTCTTCEEEECE-EEECC-SSCHHHHHHHHHHHHC-C
T ss_pred cCCEEEEEEEECCCCEEEEEEcCCccccccCCCCCeEEEec-ceEeC-CCCHHHHHHHHHHHHhCC
Confidence 367899999996 58877765 22 78899886 78999 999999999999999764
No 55
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=98.43 E-value=2.7e-07 Score=73.60 Aligned_cols=53 Identities=9% Similarity=-0.108 Sum_probs=43.4
Q ss_pred cEEEEEEEEEcCCCcEEEEeecCCCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 121 LHRAFSVFLFNSKYELLLQVCLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 121 lHRAfsVfLFNs~GeLLLQq~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
.+.++.++|++ +|++||+|...+|.|..- ||++..||+..+||.|||.||-+.
T Consensus 67 ~~~~v~~vv~~-~~~vLLv~r~~~g~w~lP-gG~ve~gEs~~~aa~REl~EEtGl 119 (205)
T 3q1p_A 67 PKVDIRAVVFQ-NEKLLFVKEKSDGKWALP-GGWADVGYTPTEVAAKEVFEETGY 119 (205)
T ss_dssp CEEEEEEEEEE-TTEEEEEEC---CCEECS-EEECCTTCCHHHHHHHHHHHHHSE
T ss_pred CcceEEEEEEE-CCEEEEEEEcCCCcEECC-cCccCCCCCHHHHHHHHHHHHHCC
Confidence 35667779998 789999984469999995 999999999999999999999654
No 56
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=98.40 E-value=2.6e-07 Score=77.28 Aligned_cols=54 Identities=9% Similarity=-0.096 Sum_probs=45.5
Q ss_pred ccEEEEEEEEEcCCCcEEEEe---ecCCCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 120 LLHRAFSVFLFNSKYELLLQV---CLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 120 LlHRAfsVfLFNs~GeLLLQq---~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
-.|.++.++|++ +|++||+| ..++|+|..- ||++..||+..+||.||+.||-++
T Consensus 201 ~~~~~v~~vi~~-~~~vLL~~r~~~~~~g~w~lP-gG~ve~gE~~~~aa~REl~EEtGl 257 (341)
T 2qjo_A 201 PTFITTDAVVVQ-AGHVLMVRRQAKPGLGLIALP-GGFIKQNETLVEGMLRELKEETRL 257 (341)
T ss_dssp CCEEEEEEEEEE-TTEEEEEECCSSSSTTCEECS-EEECCTTSCHHHHHHHHHHHHHCC
T ss_pred CCceEEEEEEEe-CCEEEEEEecCCCCCCeEECC-CCcCCCCCCHHHHHHHHHhhhhCC
Confidence 357899999995 68988887 3358999885 999999999999999999998543
No 57
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=98.39 E-value=2.1e-07 Score=74.17 Aligned_cols=51 Identities=8% Similarity=-0.157 Sum_probs=42.7
Q ss_pred EEEEEEEEcCCCcEEEEe----ecCCCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 123 RAFSVFLFNSKYELLLQV----CLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 123 RAfsVfLFNs~GeLLLQq----~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
-++.|++++.+ ++||+| ...+++|.+ .||++..||+..+||+|||.||-++
T Consensus 50 ~av~vl~~~~~-~vLLvrq~r~~~~~~~wel-PgG~ve~gEs~~~aA~REl~EEtGl 104 (198)
T 1vhz_A 50 EAVMIVPIVDD-HLILIREYAVGTESYELGF-SKGLIDPGESVYEAANRELKEEVGF 104 (198)
T ss_dssp CEEEEEEEETT-EEEEEEEEETTTTEEEEEC-EEEECCTTCCHHHHHHHHHHHHHSE
T ss_pred CEEEEEEEECC-EEEEEEcccCCCCCcEEEe-CcccCCCCcCHHHHHHHHHHHHHCC
Confidence 47888889887 877775 245789998 5899999999999999999999654
No 58
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=98.39 E-value=1.8e-07 Score=79.02 Aligned_cols=52 Identities=6% Similarity=-0.119 Sum_probs=44.5
Q ss_pred EEEEEEEEcC-CCcEEEEe-ecCCCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 123 RAFSVFLFNS-KYELLLQV-CLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 123 RAfsVfLFNs-~GeLLLQq-~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
.++.++|+|. +|++||+| ...||.|..- |||+..||+..+||+||+.||-+.
T Consensus 102 ~~v~avv~~~~~~~vLLv~r~~~~g~W~lP-gG~ve~gEs~~eAA~REl~EEtGl 155 (271)
T 2a6t_A 102 PVRGAIMLDMSMQQCVLVKGWKASSGWGFP-KGKIDKDESDVDCAIREVYEETGF 155 (271)
T ss_dssp CEEEEEEBCSSSSEEEEEEESSTTCCCBCS-EEECCTTCCHHHHHHHHHHHHHCC
T ss_pred CeEEEEEEECCCCEEEEEEEeCCCCeEECC-cccCCCCcCHHHHHHHHHHHHhCC
Confidence 4678899987 48988888 5579999776 999999999999999999999543
No 59
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=98.39 E-value=2.8e-07 Score=77.78 Aligned_cols=54 Identities=7% Similarity=-0.063 Sum_probs=45.7
Q ss_pred ccEEEEEEEEEcCCCcEEEEe---ecCCCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 120 LLHRAFSVFLFNSKYELLLQV---CLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 120 LlHRAfsVfLFNs~GeLLLQq---~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
..|.++.++|+ .+|++||+| ..++|+|..- ||++..||+.++||.||+.||-++
T Consensus 206 ~~~~~v~~vv~-~~~~vLL~~r~~~~~~g~w~lP-gG~ve~gEt~~~aa~REl~EEtGl 262 (352)
T 2qjt_B 206 PNFVTVDALVI-VNDHILMVQRKAHPGKDLWALP-GGFLECDETIAQAIIRELFEETNI 262 (352)
T ss_dssp CEEEEEEEEEE-ETTEEEEEEESSSSSTTCEECS-EEECCTTSCHHHHHHHHHHHHHCC
T ss_pred CCceEEEEEEE-ECCEEEEEEEcCCCCCCeEECC-CCcCCCCCCHHHHHHHHHHHhhCC
Confidence 46889999999 578988887 3357999985 999999999999999999999543
No 60
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=98.37 E-value=3.5e-07 Score=73.78 Aligned_cols=54 Identities=15% Similarity=-0.061 Sum_probs=43.8
Q ss_pred CccEEEEEEEEE-----------cCCCcEEEEeecCCCceecccccCcCCCC-CHHHHHHhhhhccCc
Q 030138 119 NLLHRAFSVFLF-----------NSKYELLLQVCLFCILWVKTCLSMDCHWV-VQICGLTWEMTDSNI 174 (182)
Q Consensus 119 GLlHRAfsVfLF-----------Ns~GeLLLQq~~fPglWDnTcgGHplaGE-s~~eAA~REl~ee~~ 174 (182)
..++++++++++ |.+|++||||. ++|+|..- ||++..|| +..+||.||+.||-+
T Consensus 30 ~~~~~~~~~~l~~~~~~vv~~i~~~~~~vLl~~r-~~g~w~~P-GG~ve~gE~t~~~aa~REl~EEtG 95 (212)
T 1u20_A 30 EGYKHACHALLHAPSQAKLFDRVPIRRVLLMMMR-FDGRLGFP-GGFVDTRDISLEEGLKRELEEELG 95 (212)
T ss_dssp SSCEEEEEEEEEEECCCEETTTEECCEEEEEEEE-TTSCEECS-EEEECTTTSCHHHHHHHHHHHHHC
T ss_pred CCCcccceEEEeCCCceEEEEEEecCCEEEEEEe-CCCeEECC-CcccCCCCCCHHHHHHHHHHHHHC
Confidence 334556666554 45778999986 79999997 89999999 999999999999844
No 61
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=98.33 E-value=4e-07 Score=75.16 Aligned_cols=54 Identities=13% Similarity=0.075 Sum_probs=45.9
Q ss_pred cEEEEEEEEE---cCCCcEEEEe---ecCCCceecccccCcCC--CCCHHHHHHhhhhccCce
Q 030138 121 LHRAFSVFLF---NSKYELLLQV---CLFCILWVKTCLSMDCH--WVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 121 lHRAfsVfLF---Ns~GeLLLQq---~~fPglWDnTcgGHpla--GEs~~eAA~REl~ee~~~ 175 (182)
.+.++.++|| +.++++||+| ..++|.|..- |||+.. ||+..+||+|||.||-++
T Consensus 21 p~v~v~~vi~~~~~~~~~vLLv~R~~~~~~g~W~lP-GG~ve~~~gEs~~~AA~REl~EEtGl 82 (240)
T 3gz5_A 21 QLLTVDAVLFTYHDQQLKVLLVQRSNHPFLGLWGLP-GGFIDETCDESLEQTVLRKLAEKTAV 82 (240)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEECCSSSSTTCEECS-EEECCTTTCSBHHHHHHHHHHHHHSS
T ss_pred CccEEEEEEEEEeCCCcEEEEEECcCCCCCCCEECC-ccccCCCCCcCHHHHHHHHHHHHHCC
Confidence 5678888888 5567888877 5689999986 999999 999999999999998654
No 62
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=98.31 E-value=4.2e-07 Score=73.02 Aligned_cols=53 Identities=17% Similarity=0.036 Sum_probs=42.0
Q ss_pred EEEEEEEEEc-CCCcEEE--Ee--ecC-----CCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 122 HRAFSVFLFN-SKYELLL--QV--CLF-----CILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 122 HRAfsVfLFN-s~GeLLL--Qq--~~f-----PglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
+.++.|+++| .+|++|| |. ... +++|.+ +||++..||+.++||+|||.||-+.
T Consensus 57 ~~av~vl~~~~~~~~vLLvrq~R~~~~~~~~~~~~wel-PgG~ve~gE~~~~aA~REl~EEtGl 119 (209)
T 1g0s_A 57 GHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEM-VAGMIEEGESVEDVARREAIEEAGL 119 (209)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECGGGGGGSSCSEEEEC-EEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred CCEEEEEEEECCCCEEEEEEeecccCCCCCCCCeEEEe-CcccCCCCcCHHHHHHHHHHHHcCc
Confidence 4689999999 5788777 33 111 577887 4899999999999999999999543
No 63
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=98.30 E-value=2.6e-07 Score=76.04 Aligned_cols=53 Identities=17% Similarity=0.082 Sum_probs=43.8
Q ss_pred EEEEEEEEEcC-CCcEEEEe----ecC-------------------------------CCceecccccCcCC-CCCHHHH
Q 030138 122 HRAFSVFLFNS-KYELLLQV----CLF-------------------------------CILWVKTCLSMDCH-WVVQICG 164 (182)
Q Consensus 122 HRAfsVfLFNs-~GeLLLQq----~~f-------------------------------PglWDnTcgGHpla-GEs~~eA 164 (182)
|.+|.|++||. ++++||.| ..+ +++|.+- ||++.. ||+.++|
T Consensus 36 ~~aV~vl~~~~~~~~vlLvrQ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~welP-gG~ve~~gEs~~ea 114 (218)
T 3q91_A 36 HDSVTVLLFNSSRRSLVLVKQFRPAVYAGEVERRFPGSLAAVDQDGPRELQPALPGSAGVTVELC-AGLVDQPGLSLEEV 114 (218)
T ss_dssp CCEEEEEEEEGGGTEEEEEEEECHHHHHHHTC-------------------------CCEEEECE-EEECCSSSCCHHHH
T ss_pred CCeEEEEEEECCCCEEEEEEccccccccccccccccccccccccccccccccccccCCCeEEECC-cceeCCCCCCHHHH
Confidence 78999999994 67777744 223 7889877 899999 9999999
Q ss_pred HHhhhhccCce
Q 030138 165 LTWEMTDSNIL 175 (182)
Q Consensus 165 A~REl~ee~~~ 175 (182)
|+|||.||-+.
T Consensus 115 A~REl~EEtGl 125 (218)
T 3q91_A 115 ACKEAWEECGY 125 (218)
T ss_dssp HHHHHHHHHCB
T ss_pred HHHHHHHHhCC
Confidence 99999998654
No 64
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=98.29 E-value=4.8e-07 Score=70.21 Aligned_cols=53 Identities=9% Similarity=-0.071 Sum_probs=38.3
Q ss_pred CccEEEEEEEEEcCCCcEEEEeecCCCceecccccCcCCCCCHHHHHHhhhhccCc
Q 030138 119 NLLHRAFSVFLFNSKYELLLQVCLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNI 174 (182)
Q Consensus 119 GLlHRAfsVfLFNs~GeLLLQq~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~ 174 (182)
..+..++.+++++. |++||.|.. +|.|..- ||++..||+..+||.||+.||-+
T Consensus 13 ~~~~~~~~~ii~~~-~~vLL~~r~-~g~w~lP-gG~ve~gEs~~~aa~REl~EEtG 65 (163)
T 3f13_A 13 SDLARRATAIIEMP-DGVLVTASR-GGRYNLP-GGKANRGELRSQALIREIREETG 65 (163)
T ss_dssp SSCEEEEEEECEET-TEEEEEECC----BBCS-EEECCTTCCHHHHHHHHHHHHHC
T ss_pred CCceEEEEEEEEeC-CEEEEEEEC-CCeEECC-ceeCCCCCCHHHHHHHHHHHHHC
Confidence 33556666666654 666666522 7999998 99999999999999999999954
No 65
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=98.28 E-value=5.6e-07 Score=67.34 Aligned_cols=53 Identities=15% Similarity=-0.053 Sum_probs=41.2
Q ss_pred cEEEEE-EEEEcC---CCcEEEEe----ecCCCceecccccCcCCCCCHH-HHHHhhhhccCc
Q 030138 121 LHRAFS-VFLFNS---KYELLLQV----CLFCILWVKTCLSMDCHWVVQI-CGLTWEMTDSNI 174 (182)
Q Consensus 121 lHRAfs-VfLFNs---~GeLLLQq----~~fPglWDnTcgGHplaGEs~~-eAA~REl~ee~~ 174 (182)
.+|.+. ++|++. +|++||+| ..++|+|+.- ||++..||+.. +||.||+.||-+
T Consensus 17 ~~~~~~~~vi~~~~~~~~~vLl~~R~~~~~~~g~w~~P-gG~~e~gE~~~~~a~~REl~EE~g 78 (155)
T 1x51_A 17 REESSATCVLEQPGALGAQILLVQRPNSGLLAGLWEFP-SVTWEPSEQLQRKALLQELQRWAG 78 (155)
T ss_dssp TEEEEEEEEEEEECSSSEEEEEEECCCCSTTCSCEECC-EEECCSSHHHHHHHHHHHHHHHSC
T ss_pred CeEEEEEEEEEecCCCCCEEEEEECCCCCCCCceecCC-ccccCCCCCHHHHHHHHHHHHHhC
Confidence 344433 334444 58999987 4689999997 78999999996 999999999865
No 66
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=98.26 E-value=1.2e-06 Score=69.84 Aligned_cols=52 Identities=13% Similarity=-0.075 Sum_probs=44.7
Q ss_pred cEEEEEEEEEcCCCcEEEEeecCCCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 121 LHRAFSVFLFNSKYELLLQVCLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 121 lHRAfsVfLFNs~GeLLLQq~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
.+.++.++|++. |++||+|.. +|.|..- ||++..||+..+||.||+.||-+.
T Consensus 69 ~~~~v~~vv~~~-~~vLLvrr~-~g~w~lP-gG~ve~gEs~~~aa~REl~EEtGl 120 (206)
T 3o8s_A 69 PKLDTRAAIFQE-DKILLVQEN-DGLWSLP-GGWCDVDQSVKDNVVKEVKEEAGL 120 (206)
T ss_dssp CEEEEEEEEEET-TEEEEEECT-TSCEECS-EEECCTTSCHHHHHHHHHHHHHCE
T ss_pred CCccEEEEEEEC-CEEEEEEec-CCeEECC-eeccCCCCCHHHHHHHHHHHHHCC
Confidence 356777889985 899999844 9999987 899999999999999999999654
No 67
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=98.11 E-value=3e-06 Score=71.12 Aligned_cols=53 Identities=11% Similarity=0.006 Sum_probs=43.7
Q ss_pred cEEEEEEEEEcC-----CCcEEEEe---ecCCCceecccccCcCCCCCHHHHHHhhhhccCc
Q 030138 121 LHRAFSVFLFNS-----KYELLLQV---CLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNI 174 (182)
Q Consensus 121 lHRAfsVfLFNs-----~GeLLLQq---~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~ 174 (182)
.+.++.++||.- ++++||+| ..|+|+|..- |||+..||+..+||.|||.||-+
T Consensus 38 p~v~v~~vv~~~~~~~~~~~VLLv~R~~~p~~g~W~lP-GG~ve~gEs~~~AA~REl~EEtG 98 (273)
T 2fml_A 38 PSLTVDMVLLCYNKEADQLKVLLIQRKGHPFRNSWALP-GGFVNRNESTEDSVLRETKEETG 98 (273)
T ss_dssp CEEEEEEEEEEEETTTTEEEEEEEEECSSSSTTCEECC-EEECCTTSCHHHHHHHHHHHHHC
T ss_pred CceEEEEEEEEEcCCCCCcEEEEEEccCCCCCCcEECC-ccCCCCCcCHHHHHHHHHHHHHC
Confidence 467788888752 34777776 4578999998 99999999999999999999954
No 68
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=98.11 E-value=3.6e-06 Score=73.59 Aligned_cols=52 Identities=13% Similarity=-0.020 Sum_probs=44.4
Q ss_pred EEEEEEEEEcCCCcEEEEe----ecCCCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 122 HRAFSVFLFNSKYELLLQV----CLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 122 HRAfsVfLFNs~GeLLLQq----~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
..++.++|+|.+|++||+| ..|+|+|+.- ||++..| +..+|+.||+.||-++
T Consensus 240 ~~~~~~vi~~~~g~vLL~rR~~~g~~~GlWefP-GG~ve~g-t~~~al~REl~EE~Gl 295 (369)
T 3fsp_A 240 VPLAVAVLADDEGRVLIRKRDSTGLLANLWEFP-SCETDGA-DGKEKLEQMVGEQYGL 295 (369)
T ss_dssp EEEEEEEEECSSSEEEEEECCSSSTTTTCEECC-EEECSSS-CTHHHHHHHHTTSSSC
T ss_pred EEEEEEEEEeCCCEEEEEECCCCCCcCCcccCC-CcccCCC-CcHHHHHHHHHHHhCC
Confidence 4455666788999999998 4699999998 8999999 9999999999998653
No 69
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=98.01 E-value=4.6e-06 Score=70.81 Aligned_cols=48 Identities=6% Similarity=-0.087 Sum_probs=38.9
Q ss_pred EEEEcCCCcEEEEe-ecC-CCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 127 VFLFNSKYELLLQV-CLF-CILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 127 VfLFNs~GeLLLQq-~~f-PglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
+++++.+|++||+| ..+ +|+|+. .||++..||+.++||.||+.||-++
T Consensus 144 iv~v~~~~~vLL~rr~~~~~g~w~l-PgG~vE~GEt~eeAa~REv~EEtGl 193 (269)
T 1vk6_A 144 IVAIRRDDSILLAQHTRHRNGVHTV-LAGFVEVGETLEQAVAREVMEESGI 193 (269)
T ss_dssp EEEEEETTEEEEEEETTTCSSCCBC-EEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred EEEEEeCCEEEEEEecCCCCCcEEC-CcCcCCCCCCHHHHHHHHHHHHhCc
Confidence 34455678998888 323 699999 5999999999999999999998543
No 70
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=97.98 E-value=1.1e-05 Score=68.80 Aligned_cols=39 Identities=13% Similarity=0.016 Sum_probs=33.6
Q ss_pred cEEEEeecCCCceecccccCcCCCCCHHHHHHhhhhccCc
Q 030138 135 ELLLQVCLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNI 174 (182)
Q Consensus 135 eLLLQq~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~ 174 (182)
++||+|...+|.|.+- |||+..||+..+||+|||.||-+
T Consensus 140 ~vLl~~r~~~g~W~lP-GG~Ve~GEs~~eAA~REl~EETG 178 (292)
T 1q33_A 140 QFVAIKRKDCGEWAIP-GGMVDPGEKISATLKREFGEEAL 178 (292)
T ss_dssp EEEEEECTTTCSEECC-CEECCTTCCHHHHHHHHHHHHHS
T ss_pred EEEEEEecCCCcEeCC-CcccCCCCCHHHHHHHHHHHHhC
Confidence 4777774446999996 99999999999999999999954
No 71
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=97.98 E-value=4.1e-06 Score=66.91 Aligned_cols=53 Identities=6% Similarity=-0.157 Sum_probs=39.4
Q ss_pred EEEEEEEEEcCC----CcEEEEe----ecCCCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 122 HRAFSVFLFNSK----YELLLQV----CLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 122 HRAfsVfLFNs~----GeLLLQq----~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
|.++.|+.+..+ +++||.+ ...+++|.+- ||++..||+.++||+|||.||-++
T Consensus 61 ~~av~v~~v~~~~~~~~~vlLv~q~R~~~~~~~welP-gG~ve~gEs~~~aA~REl~EEtGl 121 (212)
T 2dsc_A 61 ADGVAVIPVLQRTLHYECIVLVKQFRPPMGGYCIEFP-AGLIDDGETPEAAALRELEEETGY 121 (212)
T ss_dssp CSEEEEEEEEECTTSCCEEEEEEEEEGGGTEEEEECC-EEECCTTCCHHHHHHHHHHHHHCC
T ss_pred CCEEEEEEEEeCCCCCcEEEEEEeecCCCCCcEEECC-ccccCCCCCHHHHHHHHHHHHhCC
Confidence 557777755332 4666644 2246789986 799999999999999999999553
No 72
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=97.65 E-value=4e-05 Score=65.97 Aligned_cols=44 Identities=7% Similarity=-0.176 Sum_probs=37.2
Q ss_pred cCCCcEEEEeecCCCceecccccCcCCCCCHHHHHHhhhhccCce
Q 030138 131 NSKYELLLQVCLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNIL 175 (182)
Q Consensus 131 Ns~GeLLLQq~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~~ 175 (182)
+.++++||.|....|.|..- ||++..||+..+||.||+.||-++
T Consensus 35 ~~~~~vLLv~r~~~g~W~lP-gG~ve~gEs~~~AA~REl~EEtGl 78 (364)
T 3fjy_A 35 LDSIEVCIVHRPKYDDWSWP-KGKLEQNETHRHAAVREIGEETGS 78 (364)
T ss_dssp HTTEEEEEEEETTTTEEECC-EEECCTTCCHHHHHHHHHHHHHSC
T ss_pred CCceEEEEEEcCCCCCEECC-cCCCCCCCCHHHHHHHHHHHHhCC
Confidence 44558888775556999997 899999999999999999999764
No 73
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=97.35 E-value=6.5e-05 Score=62.72 Aligned_cols=58 Identities=9% Similarity=-0.077 Sum_probs=44.3
Q ss_pred CccEEEEEEEEEcC-CC--cEEEEe-----ecCCCceecccccCcCCCCCH--------------------HHHHHhhhh
Q 030138 119 NLLHRAFSVFLFNS-KY--ELLLQV-----CLFCILWVKTCLSMDCHWVVQ--------------------ICGLTWEMT 170 (182)
Q Consensus 119 GLlHRAfsVfLFNs-~G--eLLLQq-----~~fPglWDnTcgGHplaGEs~--------------------~eAA~REl~ 170 (182)
...|.|+-|+|.+. +| ++|++| ..+||.|..- ||++..||+. ..||.||+.
T Consensus 6 ~~r~aA~lill~~~~~g~~~vLl~~R~~~~~~~~g~~~fP-GG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~~aAiRE~~ 84 (232)
T 3qsj_A 6 DIRKAATLVVIRDGANKDIEVLVVRRAKTMRFLPGFVAFP-GGAADPSDAEMAKRAFGRPVCAEDDDDPALAVTALRETA 84 (232)
T ss_dssp CEEEEEEEEEEEECGGGCEEEEEEEECTTCSSSTTCEECS-EEECCHHHHHHHHTCBSCCBTCCSTTHHHHHHHHHHHHH
T ss_pred CCcceEEEEEEEcCCCCCeEEEEEEccCCCCCCCCcEECC-ceeEecCCCCchhhhcccccccccchhhHHHHHHHHHHH
Confidence 34566666666664 34 788887 4479999998 9999999985 899999999
Q ss_pred ccCceEE
Q 030138 171 DSNILFV 177 (182)
Q Consensus 171 ee~~~~~ 177 (182)
||-+..+
T Consensus 85 EE~Gl~l 91 (232)
T 3qsj_A 85 EEIGWLL 91 (232)
T ss_dssp HHHSCCC
T ss_pred HHhCcee
Confidence 9966543
No 74
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=97.32 E-value=0.00011 Score=62.02 Aligned_cols=54 Identities=13% Similarity=-0.076 Sum_probs=43.1
Q ss_pred ccEEEEEEEEEcCC-----Cc------EEEEeecCCCceecccccCcCCCC-CHHHHHHhhhhccCce
Q 030138 120 LLHRAFSVFLFNSK-----YE------LLLQVCLFCILWVKTCLSMDCHWV-VQICGLTWEMTDSNIL 175 (182)
Q Consensus 120 LlHRAfsVfLFNs~-----Ge------LLLQq~~fPglWDnTcgGHplaGE-s~~eAA~REl~ee~~~ 175 (182)
-|-.|.||+++-++ |+ +|+| ..|+|+|+.- ||.+..|| +.++|+.|||.||...
T Consensus 19 ~~~hach~mlya~~~~~lfg~~p~r~~iLmQ-~R~~G~weFP-GGkVe~gE~t~e~aL~REl~EElg~ 84 (214)
T 3kvh_A 19 GWSHSCHAMLYAANPGQLFGRIPMRFSVLMQ-MRFDGLLGFP-GGFVDRRFWSLEDGLNRVLGLGLGC 84 (214)
T ss_dssp TCEEEEEEEEEEEEEEEETTTEEEEEEEEEE-EETTSCEECS-EEEECTTTCCHHHHHHHSCCSCC--
T ss_pred CccEeeEEEEEcCCccccccccchhheEEEe-eeeCCEEeCC-CccCCCCCCCHHHHHHHHHHHhhCC
Confidence 47778899998765 22 4444 4588999999 99999999 9999999999999763
No 75
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=97.24 E-value=0.00031 Score=57.38 Aligned_cols=38 Identities=16% Similarity=-0.087 Sum_probs=32.1
Q ss_pred cEEEEeecCCCceecccccCcCCCC-CHHHHHHhhhhccCc
Q 030138 135 ELLLQVCLFCILWVKTCLSMDCHWV-VQICGLTWEMTDSNI 174 (182)
Q Consensus 135 eLLLQq~~fPglWDnTcgGHplaGE-s~~eAA~REl~ee~~ 174 (182)
++|+|+. ++|+|..- ||++..|| +..+||+|||.||-+
T Consensus 66 ~~ll~~r-~~g~w~lP-GG~ve~gE~t~~eaa~REl~EEtG 104 (217)
T 2xsq_A 66 AILMQMR-FDGRLGFP-GGFVDTQDRSLEDGLNRELREELG 104 (217)
T ss_dssp EEEEEEE-TTSCEECS-EEECCTTCSSHHHHHHHHHHHHHC
T ss_pred cEEEEEc-cCCeEECC-ceecCCCCCCHHHHHHHHHHHHHC
Confidence 4566553 49999987 89999999 999999999999954
No 76
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=95.78 E-value=0.012 Score=49.48 Aligned_cols=55 Identities=16% Similarity=0.054 Sum_probs=45.9
Q ss_pred cCCccEEEEEEEEEcCCC--c-EEEEeecCCCceecccccCcCCCCCHHHHHHhhhhccCc
Q 030138 117 SLNLLHRAFSVFLFNSKY--E-LLLQVCLFCILWVKTCLSMDCHWVVQICGLTWEMTDSNI 174 (182)
Q Consensus 117 ~~GLlHRAfsVfLFNs~G--e-LLLQq~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~~ 174 (182)
+.|+...+..|++.+..| + ||+|+ -.+.|..- ||-+.+||+.++|++|||.||..
T Consensus 54 ~~g~R~sV~avil~~~~~~phVLLlq~--~~~~f~LP-GGkle~gE~~~eaL~REL~EELg 111 (208)
T 3bho_A 54 KIGMRRTVEGVLIVHEHRLPHVLLLQL--GTTFFKLP-GGELNPGEDEVEGLKRLMTEILG 111 (208)
T ss_dssp HHCSEEEEEEEEEEEETTEEEEEEEEE--ETTEEECS-EEECCTTCCHHHHHHHHHHHHHC
T ss_pred hhCCceEEEEEEEEcCCCCcEEEEEEc--CCCcEECC-CcccCCCCCHHHHHHHHHHHHhC
Confidence 368888888888888877 3 66676 25688887 89999999999999999999986
No 77
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=93.28 E-value=0.05 Score=47.30 Aligned_cols=42 Identities=5% Similarity=-0.263 Sum_probs=32.7
Q ss_pred EEEEEEcCCCcEEEEeecCCCceecccccCcCCCCCHHHHHHhhhhccC
Q 030138 125 FSVFLFNSKYELLLQVCLFCILWVKTCLSMDCHWVVQICGLTWEMTDSN 173 (182)
Q Consensus 125 fsVfLFNs~GeLLLQq~~fPglWDnTcgGHplaGEs~~eAA~REl~ee~ 173 (182)
+.++|++ +|++||| .-.| |..- ||++ ||+..++|.||+.||-
T Consensus 186 vgaii~~-~g~vLL~--~~~G-W~LP-G~~~--~~~~~~~a~RE~~EEt 227 (321)
T 3rh7_A 186 LGAVLEQ-QGAVFLA--GNET-LSLP-NCTV--EGGDPARTLAAYLEQL 227 (321)
T ss_dssp EEEEEES-SSCEEEB--CSSE-EBCC-EEEE--SSSCHHHHHHHHHHHH
T ss_pred EEEEEEE-CCEEEEe--eCCC-ccCC-cccC--CCChhHHHHHHHHHHh
Confidence 6677775 6999999 4457 9999 6765 5666679999999995
No 78
>3zv0_C H/ACA ribonucleoprotein complex subunit 4; cell cycle, RNP assembly, X-linked dyskeratosis congenita; 2.80A {Saccharomyces cerevisiae}
Probab=51.25 E-value=16 Score=30.11 Aligned_cols=53 Identities=9% Similarity=0.122 Sum_probs=32.3
Q ss_pred cCeEEEeecCCcEEeee-echhchhhhccccCCccEEEEEEEEEcCCCcEEEEeecCCCceecc
Q 030138 88 EDECILVDENDRVVGHE-NKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQVCLFCILWVKT 150 (182)
Q Consensus 88 eE~vdLVDe~d~~iG~~-~R~~~Hr~e~i~~~GLlHRAfsVfLFNs~GeLLLQq~~fPglWDnT 150 (182)
.|.|.|+|++|+++|.. .....-.+.... +|..=.+-+||.- +.+||-+|...
T Consensus 109 GD~V~V~~~~G~~IAvG~a~~sS~Ei~~~~-kG~aVkv~rVimd---------~~~Yp~~W~~g 162 (195)
T 3zv0_C 109 YDEIVLITTKGEAIAVAIAQMSTVDLASCD-HGVVASVKRCIME---------RDLYPRRWGLG 162 (195)
T ss_dssp TCEEEEECTTCCEEEEEEESSCHHHHHHCS-SSEEEEEEEECBC---------TTSSCCCCSSC
T ss_pred CCEEEEEcCCCCEEEEEEEcCCHHHHhhcC-CcEEEEEEEEEeC---------CCCcCcccccC
Confidence 47899999999998763 333333333333 4644444444332 24899999864
No 79
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=43.60 E-value=20 Score=26.46 Aligned_cols=22 Identities=14% Similarity=0.007 Sum_probs=18.5
Q ss_pred CeEEEeecCCcEEeeeechhch
Q 030138 89 DECILVDENDRVVGHENKYNCH 110 (182)
Q Consensus 89 E~vdLVDe~d~~iG~~~R~~~H 110 (182)
-.+.+||++|+++|..++.+.=
T Consensus 116 ~~lpVVd~~g~l~GiiT~~Dil 137 (156)
T 3k6e_A 116 SFLPVVDAEGIFQGIITRKSIL 137 (156)
T ss_dssp SEEEEECTTSBEEEEEEHHHHH
T ss_pred CCeEEEecCCEEEEEEEHHHHH
Confidence 4577899999999999997763
No 80
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=41.65 E-value=26 Score=24.86 Aligned_cols=22 Identities=14% Similarity=0.007 Sum_probs=18.6
Q ss_pred CeEEEeecCCcEEeeeechhch
Q 030138 89 DECILVDENDRVVGHENKYNCH 110 (182)
Q Consensus 89 E~vdLVDe~d~~iG~~~R~~~H 110 (182)
..+.+||++|+++|..++.+.-
T Consensus 116 ~~lpVvd~~g~~~Giit~~dil 137 (156)
T 3ctu_A 116 SFLPVVDAEGIFQGIITRKSIL 137 (156)
T ss_dssp SEEEEECTTSBEEEEEETTHHH
T ss_pred CeEEEEcCCCeEEEEEEHHHHH
Confidence 4688899999999999987763
No 81
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=39.87 E-value=26 Score=24.66 Aligned_cols=25 Identities=12% Similarity=-0.024 Sum_probs=19.5
Q ss_pred hhcCeEEEeecCCcEEeeeechhch
Q 030138 86 MFEDECILVDENDRVVGHENKYNCH 110 (182)
Q Consensus 86 M~eE~vdLVDe~d~~iG~~~R~~~H 110 (182)
.....+.+||++|+++|..++.+.-
T Consensus 114 ~~~~~l~Vvd~~g~~~Giit~~dil 138 (150)
T 3lqn_A 114 IDHPFICAVNEDGYFEGILTRRAIL 138 (150)
T ss_dssp HHCSEEEEECTTCBEEEEEEHHHHH
T ss_pred HhCCEEEEECCCCcEEEEEEHHHHH
Confidence 3334588899999999999887653
No 82
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=38.08 E-value=27 Score=24.93 Aligned_cols=32 Identities=3% Similarity=-0.099 Sum_probs=21.9
Q ss_pred ccHHHHHhhhcCeEEEeecCCcEEeeeechhc
Q 030138 78 MDAVQRRLMFEDECILVDENDRVVGHENKYNC 109 (182)
Q Consensus 78 ~d~~Q~~~M~eE~vdLVDe~d~~iG~~~R~~~ 109 (182)
+.+....+.....+.|||++++++|..++.+.
T Consensus 105 l~~a~~~m~~~~~lpVvd~~g~~vGiit~~di 136 (159)
T 1yav_A 105 IMKGFGMVINNGFVCVENDEQVFEGIFTRRVV 136 (159)
T ss_dssp HHHHHHHTTTCSEEEEECTTCBEEEEEEHHHH
T ss_pred HHHHHHHHHhCCEEEEEeCCCeEEEEEEHHHH
Confidence 33343333333457888999999999998765
No 83
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=36.56 E-value=31 Score=24.37 Aligned_cols=21 Identities=5% Similarity=0.044 Sum_probs=17.8
Q ss_pred CeEEEeecCCcEEeeeechhc
Q 030138 89 DECILVDENDRVVGHENKYNC 109 (182)
Q Consensus 89 E~vdLVDe~d~~iG~~~R~~~ 109 (182)
..+.+||++++++|..++.+.
T Consensus 113 ~~l~Vvd~~g~~~Giit~~di 133 (157)
T 2emq_A 113 PFVCVENDDGYFAGIFTRREV 133 (157)
T ss_dssp SEEEEECSSSSEEEEEEHHHH
T ss_pred CEEEEEcCCCeEEEEEEHHHH
Confidence 448888999999999998765
No 84
>1zxu_A AT5G01750 protein; PFAM PF01167, TULP, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 1.70A {Arabidopsis thaliana} SCOP: d.23.1.2 PDB: 2q4m_A
Probab=36.48 E-value=38 Score=26.83 Aligned_cols=52 Identities=8% Similarity=-0.012 Sum_probs=31.9
Q ss_pred eEEEeecCCcEEeeeechhchhhhccccCCccEEEEEEEEEcCCCcEEEEe----ecCCCceeccccc
Q 030138 90 ECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQV----CLFCILWVKTCLS 153 (182)
Q Consensus 90 ~vdLVDe~d~~iG~~~R~~~Hr~e~i~~~GLlHRAfsVfLFNs~GeLLLQq----~~fPglWDnTcgG 153 (182)
.+.|+|++|+++..+.-+.+ .+-..+.|+|.+|+.|+.- ..+-..|++.-++
T Consensus 53 ~f~V~D~~G~~vf~V~~~~~------------~~~~~~~l~D~~G~~l~~i~rk~~~~~~~~~v~~~~ 108 (217)
T 1zxu_A 53 NFVITDVNGNLLFKVKEPVF------------GLHDKRVLLDGSGTPVVTLREKMVSMHDRWQVFRGG 108 (217)
T ss_dssp CEEEEETTSCEEEEEECSST------------TCCSEEEEECTTSCEEEEEEC------CEEEEEETT
T ss_pred CEEEEeCCCCEEEEEEcccc------------CCCCEEEEECCCCCEEEEEEccccccCcEEEEEcCC
Confidence 67889999998887543222 2234567888888866553 3345778776544
No 85
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=34.44 E-value=24 Score=24.23 Aligned_cols=21 Identities=24% Similarity=0.253 Sum_probs=18.0
Q ss_pred CeEEEeecCCcEEeeeechhc
Q 030138 89 DECILVDENDRVVGHENKYNC 109 (182)
Q Consensus 89 E~vdLVDe~d~~iG~~~R~~~ 109 (182)
..+.++|++++++|..++.+.
T Consensus 100 ~~lpVvd~~g~~~Giit~~dl 120 (128)
T 3gby_A 100 SVVPLADEDGRYEGVVSRKRI 120 (128)
T ss_dssp SEEEEECTTCBEEEEEEHHHH
T ss_pred cEEEEECCCCCEEEEEEHHHH
Confidence 358899999999999988765
No 86
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=33.19 E-value=28 Score=23.38 Aligned_cols=21 Identities=29% Similarity=0.335 Sum_probs=18.1
Q ss_pred CeEEEeecCCcEEeeeechhc
Q 030138 89 DECILVDENDRVVGHENKYNC 109 (182)
Q Consensus 89 E~vdLVDe~d~~iG~~~R~~~ 109 (182)
..+.++|++|+++|..++.+.
T Consensus 94 ~~l~Vvd~~g~~~Givt~~dl 114 (122)
T 3kpb_A 94 SGVPVVDDYRRVVGIVTSEDI 114 (122)
T ss_dssp SEEEEECTTCBEEEEEEHHHH
T ss_pred CeEEEECCCCCEEEEEeHHHH
Confidence 468999999999999988665
No 87
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=33.14 E-value=28 Score=23.98 Aligned_cols=21 Identities=24% Similarity=0.226 Sum_probs=17.9
Q ss_pred CeEEEeecCCcEEeeeechhc
Q 030138 89 DECILVDENDRVVGHENKYNC 109 (182)
Q Consensus 89 E~vdLVDe~d~~iG~~~R~~~ 109 (182)
..+.++|++|+++|..++.+.
T Consensus 100 ~~lpVvd~~g~~~Giit~~dl 120 (127)
T 3nqr_A 100 HMAIVIDEFGGVSGLVTIEDI 120 (127)
T ss_dssp CEEEEECTTSCEEEEEEHHHH
T ss_pred eEEEEEeCCCCEEEEEEHHHH
Confidence 458889999999999988665
No 88
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=32.92 E-value=28 Score=24.06 Aligned_cols=21 Identities=24% Similarity=0.291 Sum_probs=17.9
Q ss_pred CeEEEeecCCcEEeeeechhc
Q 030138 89 DECILVDENDRVVGHENKYNC 109 (182)
Q Consensus 89 E~vdLVDe~d~~iG~~~R~~~ 109 (182)
..+.++|++|+++|..++.+.
T Consensus 103 ~~~~Vvd~~g~~vGivt~~di 123 (130)
T 3i8n_A 103 QLALVVDEYGTVLGLVTLEDI 123 (130)
T ss_dssp CEEEEECTTSCEEEEEEHHHH
T ss_pred eEEEEEcCCCCEEEEEEHHHH
Confidence 468889999999999988665
No 89
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=31.35 E-value=31 Score=23.90 Aligned_cols=22 Identities=23% Similarity=0.289 Sum_probs=18.4
Q ss_pred CeEEEeecCCcEEeeeechhch
Q 030138 89 DECILVDENDRVVGHENKYNCH 110 (182)
Q Consensus 89 E~vdLVDe~d~~iG~~~R~~~H 110 (182)
..+.|||++|+++|..++.+.-
T Consensus 117 ~~l~Vvd~~g~~~Giit~~dil 138 (152)
T 4gqw_A 117 RRLPVVDSDGKLVGIITRGNVV 138 (152)
T ss_dssp CEEEEECTTSBEEEEEEHHHHH
T ss_pred CEEEEECCCCcEEEEEEHHHHH
Confidence 3588999999999999887663
No 90
>3gf8_A Putative polysaccharide binding proteins (DUF1812; NP_809975.1, joint center for structural genomics; HET: MSE; 2.20A {Bacteroides thetaiotaomicron vpi-5482}
Probab=31.06 E-value=32 Score=29.07 Aligned_cols=17 Identities=12% Similarity=0.430 Sum_probs=15.7
Q ss_pred EEEEEEEcCCCcEEEEe
Q 030138 124 AFSVFLFNSKYELLLQV 140 (182)
Q Consensus 124 AfsVfLFNs~GeLLLQq 140 (182)
.+.|||||++|+++-|+
T Consensus 38 ~V~lyvFD~~G~~v~~~ 54 (296)
T 3gf8_A 38 KVELYVFDKNGKYLFKQ 54 (296)
T ss_dssp EEEEEEECTTSBEEEEE
T ss_pred EEEEEEEcCCCCEEEEE
Confidence 39999999999999988
No 91
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=30.88 E-value=31 Score=23.72 Aligned_cols=21 Identities=24% Similarity=0.332 Sum_probs=18.1
Q ss_pred CeEEEeecCCcEEeeeechhc
Q 030138 89 DECILVDENDRVVGHENKYNC 109 (182)
Q Consensus 89 E~vdLVDe~d~~iG~~~R~~~ 109 (182)
..+.++|++++++|..++.+.
T Consensus 115 ~~l~Vvd~~g~~~Giit~~di 135 (144)
T 2nyc_A 115 HRFFVVDDVGRLVGVLTLSDI 135 (144)
T ss_dssp SEEEEECTTSBEEEEEEHHHH
T ss_pred CEEEEECCCCCEEEEEEHHHH
Confidence 468899999999999988765
No 92
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=30.86 E-value=31 Score=23.59 Aligned_cols=21 Identities=14% Similarity=0.156 Sum_probs=18.1
Q ss_pred CeEEEeecCCcEEeeeechhc
Q 030138 89 DECILVDENDRVVGHENKYNC 109 (182)
Q Consensus 89 E~vdLVDe~d~~iG~~~R~~~ 109 (182)
..+.++|++|+++|..++.+.
T Consensus 99 ~~l~Vvd~~g~~~Giit~~dl 119 (133)
T 2ef7_A 99 RHLPVVDDKGNLKGIISIRDI 119 (133)
T ss_dssp SEEEEECTTSCEEEEEEHHHH
T ss_pred CEEEEECCCCeEEEEEEHHHH
Confidence 458899999999999998765
No 93
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=30.22 E-value=33 Score=24.06 Aligned_cols=22 Identities=23% Similarity=0.246 Sum_probs=18.7
Q ss_pred CeEEEeecCCcEEeeeechhch
Q 030138 89 DECILVDENDRVVGHENKYNCH 110 (182)
Q Consensus 89 E~vdLVDe~d~~iG~~~R~~~H 110 (182)
..+.++|++|+++|..++.+.-
T Consensus 101 ~~~~Vvd~~g~lvGiit~~Dil 122 (136)
T 3lfr_A 101 HMAIVIDEYGGVAGLVTIEDVL 122 (136)
T ss_dssp CEEEEECTTSCEEEEEEHHHHH
T ss_pred eEEEEEeCCCCEEEEEEHHHHH
Confidence 4688899999999999997764
No 94
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=29.93 E-value=33 Score=23.90 Aligned_cols=21 Identities=19% Similarity=0.332 Sum_probs=18.2
Q ss_pred CeEEEeecCCcEEeeeechhc
Q 030138 89 DECILVDENDRVVGHENKYNC 109 (182)
Q Consensus 89 E~vdLVDe~d~~iG~~~R~~~ 109 (182)
..+.++|++++++|..++.+.
T Consensus 102 ~~l~Vvd~~g~~~Giit~~dl 122 (141)
T 2rih_A 102 RHVVVVNKNGELVGVLSIRDL 122 (141)
T ss_dssp SEEEEECTTSCEEEEEEHHHH
T ss_pred eEEEEEcCCCcEEEEEEHHHH
Confidence 468899999999999998766
No 95
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=29.86 E-value=33 Score=24.61 Aligned_cols=21 Identities=19% Similarity=0.325 Sum_probs=18.2
Q ss_pred CeEEEeecCCcEEeeeechhc
Q 030138 89 DECILVDENDRVVGHENKYNC 109 (182)
Q Consensus 89 E~vdLVDe~d~~iG~~~R~~~ 109 (182)
..+.|||++++++|..++.+.
T Consensus 130 ~~lpVvd~~g~~vGiit~~di 150 (180)
T 3sl7_A 130 RRLPVVDADGKLIGILTRGNV 150 (180)
T ss_dssp CEEEEECTTCBEEEEEEHHHH
T ss_pred CEEEEECCCCeEEEEEEHHHH
Confidence 358899999999999998776
No 96
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=29.70 E-value=33 Score=23.71 Aligned_cols=22 Identities=18% Similarity=0.262 Sum_probs=17.2
Q ss_pred CeEEEeecCCcEEeeeechhch
Q 030138 89 DECILVDENDRVVGHENKYNCH 110 (182)
Q Consensus 89 E~vdLVDe~d~~iG~~~R~~~H 110 (182)
..+.++|++|+++|..++.+.-
T Consensus 100 ~~~pVvd~~g~~~Giit~~Dil 121 (129)
T 3jtf_A 100 HLAIVIDEHGGISGLVTMEDVL 121 (129)
T ss_dssp CEEEEECC-CCEEEEEEHHHHH
T ss_pred eEEEEEeCCCCEEEEEEHHHHH
Confidence 3578899999999999987653
No 97
>3pay_A Putative adhesin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, cell adhesion; 2.50A {Bacteroides ovatus}
Probab=29.25 E-value=36 Score=29.14 Aligned_cols=18 Identities=28% Similarity=0.560 Sum_probs=16.1
Q ss_pred EEEEEEEEcCCCcEEEEe
Q 030138 123 RAFSVFLFNSKYELLLQV 140 (182)
Q Consensus 123 RAfsVfLFNs~GeLLLQq 140 (182)
..+.|||||++|+++-|+
T Consensus 36 ~~v~lyvFD~~G~~v~~~ 53 (314)
T 3pay_A 36 KSVDVLVFDSDDKLLFTK 53 (314)
T ss_dssp CEEEEEEECTTSBEEEEE
T ss_pred CEEEEEEEcCCCCEEEEE
Confidence 349999999999999988
No 98
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=28.81 E-value=36 Score=23.34 Aligned_cols=21 Identities=24% Similarity=0.329 Sum_probs=17.5
Q ss_pred eEEEeecCCcEEeeeechhch
Q 030138 90 ECILVDENDRVVGHENKYNCH 110 (182)
Q Consensus 90 ~vdLVDe~d~~iG~~~R~~~H 110 (182)
.+.++|++++++|..++.+.-
T Consensus 111 ~l~Vvd~~g~~~Giit~~dll 131 (138)
T 2p9m_A 111 QLPVVDKNNKLVGIISDGDII 131 (138)
T ss_dssp EEEEECTTSBEEEEEEHHHHH
T ss_pred EEEEECCCCeEEEEEEHHHHH
Confidence 578899999999999886653
No 99
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=28.43 E-value=35 Score=23.81 Aligned_cols=21 Identities=19% Similarity=0.207 Sum_probs=17.8
Q ss_pred CeEEEeecCCcEEeeeechhc
Q 030138 89 DECILVDENDRVVGHENKYNC 109 (182)
Q Consensus 89 E~vdLVDe~d~~iG~~~R~~~ 109 (182)
..+.++|++|+++|..++.+.
T Consensus 101 ~~~~Vvd~~g~lvGiit~~Di 121 (130)
T 3hf7_A 101 KVGLVVDEYGDIQGLVTVEDI 121 (130)
T ss_dssp CEEEEECTTSCEEEEEEHHHH
T ss_pred eEEEEEcCCCCEEEEeeHHHH
Confidence 457888999999999988765
No 100
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=28.39 E-value=34 Score=24.65 Aligned_cols=21 Identities=19% Similarity=0.180 Sum_probs=17.3
Q ss_pred CeEEEeecCCcEEeeeechhc
Q 030138 89 DECILVDENDRVVGHENKYNC 109 (182)
Q Consensus 89 E~vdLVDe~d~~iG~~~R~~~ 109 (182)
..+.++|++|+++|..++.+.
T Consensus 134 ~~~~Vvd~~g~~~Givt~~Di 154 (156)
T 3oi8_A 134 HMAIVIDEYGGTSGLVTFEDI 154 (156)
T ss_dssp CEEEEECTTSSEEEEEEHHHH
T ss_pred eEEEEECCCCCEEEEEEHHHh
Confidence 458889999999999888553
No 101
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=28.22 E-value=36 Score=23.95 Aligned_cols=21 Identities=24% Similarity=0.197 Sum_probs=18.1
Q ss_pred CeEEEeecCCcEEeeeechhc
Q 030138 89 DECILVDENDRVVGHENKYNC 109 (182)
Q Consensus 89 E~vdLVDe~d~~iG~~~R~~~ 109 (182)
..+.++|++|+++|..++.+.
T Consensus 119 ~~l~Vvd~~g~~~Giit~~di 139 (148)
T 3lv9_A 119 QLAIVVDEYGGTSGVVTIEDI 139 (148)
T ss_dssp SEEEEECTTSSEEEEEEHHHH
T ss_pred eEEEEEeCCCCEEEEEEHHHH
Confidence 468899999999999988765
No 102
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=27.83 E-value=37 Score=24.13 Aligned_cols=21 Identities=33% Similarity=0.392 Sum_probs=18.0
Q ss_pred CeEEEeecCCcEEeeeechhc
Q 030138 89 DECILVDENDRVVGHENKYNC 109 (182)
Q Consensus 89 E~vdLVDe~d~~iG~~~R~~~ 109 (182)
..+.+||++|+++|..++.+.
T Consensus 125 ~~lpVvd~~g~~vGiit~~di 145 (152)
T 2uv4_A 125 HRLVVVDENDVVKGIVSLSDI 145 (152)
T ss_dssp SEEEEECTTSBEEEEEEHHHH
T ss_pred eEEEEECCCCeEEEEEEHHHH
Confidence 468899999999999988665
No 103
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=27.11 E-value=32 Score=23.70 Aligned_cols=20 Identities=20% Similarity=0.353 Sum_probs=17.1
Q ss_pred CeEEEeecCCcEEeeeechhc
Q 030138 89 DECILVDENDRVVGHENKYNC 109 (182)
Q Consensus 89 E~vdLVDe~d~~iG~~~R~~~ 109 (182)
..+ +||++++++|..++.+.
T Consensus 104 ~~l-Vvd~~g~~~Giit~~di 123 (138)
T 2yzi_A 104 KHI-LIEEEGKIVGIFTLSDL 123 (138)
T ss_dssp SEE-EEEETTEEEEEEEHHHH
T ss_pred CEE-EECCCCCEEEEEEHHHH
Confidence 457 99999999999988765
No 104
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=26.65 E-value=40 Score=24.07 Aligned_cols=21 Identities=33% Similarity=0.480 Sum_probs=17.9
Q ss_pred CeEEEeecCCcEEeeeechhc
Q 030138 89 DECILVDENDRVVGHENKYNC 109 (182)
Q Consensus 89 E~vdLVDe~d~~iG~~~R~~~ 109 (182)
..+.+||++++++|..++.+.
T Consensus 127 ~~lpVvd~~g~~vGiit~~dl 147 (157)
T 1o50_A 127 QEMPVVDEKGEIVGDLNSLEI 147 (157)
T ss_dssp SEEEEECTTSCEEEEEEHHHH
T ss_pred cEEEEEcCCCEEEEEEEHHHH
Confidence 458899999999999988765
No 105
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=25.30 E-value=36 Score=24.24 Aligned_cols=22 Identities=18% Similarity=0.188 Sum_probs=18.6
Q ss_pred CeEEEeecCCcEEeeeechhch
Q 030138 89 DECILVDENDRVVGHENKYNCH 110 (182)
Q Consensus 89 E~vdLVDe~d~~iG~~~R~~~H 110 (182)
..+.+||++|+++|..++.+.-
T Consensus 117 ~~lpVvd~~g~~vGivt~~dil 138 (153)
T 3oco_A 117 PMAIVIDEYGGTSGIITDKDVY 138 (153)
T ss_dssp SCEEEECTTSCEEEEECHHHHH
T ss_pred cEEEEEeCCCCEEEEeeHHHHH
Confidence 4688999999999999987663
No 106
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=24.75 E-value=52 Score=23.90 Aligned_cols=21 Identities=24% Similarity=0.275 Sum_probs=17.9
Q ss_pred eEEEeecCCcEEeeeechhch
Q 030138 90 ECILVDENDRVVGHENKYNCH 110 (182)
Q Consensus 90 ~vdLVDe~d~~iG~~~R~~~H 110 (182)
.+.+||++|+++|..+..+.-
T Consensus 51 ~~pVvd~~g~lvGiit~~Dll 71 (170)
T 4esy_A 51 CAPVVDQNGHLVGIITESDFL 71 (170)
T ss_dssp EEEEECTTSCEEEEEEGGGGG
T ss_pred EEEEEcCCccEEEEEEHHHHH
Confidence 478999999999999887664
No 107
>2v2f_A Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc5_A* 2zc6_A*
Probab=23.99 E-value=42 Score=18.26 Aligned_cols=14 Identities=7% Similarity=0.306 Sum_probs=11.3
Q ss_pred EEEeecCCcEEeee
Q 030138 91 CILVDENDRVVGHE 104 (182)
Q Consensus 91 vdLVDe~d~~iG~~ 104 (182)
-.|||.||+++...
T Consensus 7 s~IYD~~g~~i~~l 20 (26)
T 2v2f_A 7 SKIYDNKNQLIADL 20 (26)
T ss_pred CEEEeCCCCEeeec
Confidence 47899999998863
No 108
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=23.84 E-value=45 Score=24.45 Aligned_cols=22 Identities=18% Similarity=0.175 Sum_probs=18.6
Q ss_pred CeEEEeecCCcEEeeeechhch
Q 030138 89 DECILVDENDRVVGHENKYNCH 110 (182)
Q Consensus 89 E~vdLVDe~d~~iG~~~R~~~H 110 (182)
..+.++|++|+++|..++.+.-
T Consensus 138 ~~~pVvd~~g~lvGiit~~Dil 159 (172)
T 3lhh_A 138 QMVFVVDEYGDLKGLVTLQDMM 159 (172)
T ss_dssp SEEEEECTTSCEEEEEEHHHHH
T ss_pred eEEEEEeCCCCEEEEeeHHHHH
Confidence 4688899999999999987763
No 109
>2vgl_S AP-2 complex subunit sigma-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Mus musculus} SCOP: i.23.1.1 PDB: 2jkt_I 2jkr_I* 2xa7_S
Probab=23.59 E-value=52 Score=24.42 Aligned_cols=16 Identities=13% Similarity=-0.033 Sum_probs=14.2
Q ss_pred EEEEEEcCCCcEEEEe
Q 030138 125 FSVFLFNSKYELLLQV 140 (182)
Q Consensus 125 fsVfLFNs~GeLLLQq 140 (182)
-.++|+|.+|+.+++|
T Consensus 3 ~~i~i~~~~Gk~~l~k 18 (142)
T 2vgl_S 3 RFILIQNRAGKTRLAK 18 (142)
T ss_dssp EEEEEEETTSCEEEEE
T ss_pred EEEEEEcCCCCEEEEE
Confidence 3578999999999999
No 110
>3lif_A Putative diguanylate cyclase (ggdef) with PAS/PAC; PDC fold, signaling protein; HET: CIT; 2.70A {Rhodopseudomonas palustris}
Probab=22.50 E-value=74 Score=24.17 Aligned_cols=48 Identities=19% Similarity=0.018 Sum_probs=26.8
Q ss_pred EEeecCCcEEeeee--chhchhhhccccCCccEEEEEEEEEcCCCcEEEEe
Q 030138 92 ILVDENDRVVGHEN--KYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQV 140 (182)
Q Consensus 92 dLVDe~d~~iG~~~--R~~~Hr~e~i~~~GLlHRAfsVfLFNs~GeLLLQq 140 (182)
-|.|.+|+++|... -..-...+-+. .-.+-.--.++|+|.+|.++.+.
T Consensus 133 pi~~~~g~~~Gvl~~~i~l~~l~~~~~-~~~~~~~g~~~l~d~~G~ii~~~ 182 (254)
T 3lif_A 133 RLETTDGKFFGVVVATIESEYFSTFYK-TFDLGPGGSISLLHSDGRLLIQW 182 (254)
T ss_dssp EEECTTCCEEEEEEEEECHHHHHHHHT-TSCCCTTCEEEEEETTSBEEEEE
T ss_pred eeeCCCCCEeEEEEEEECHHHHHHHHH-hcCcCCCcEEEEEeCCCcEEEEC
Confidence 35577899888732 11111111121 11111224789999999999985
No 111
>4b6a_O 60S ribosomal protein L16-A; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae} PDB: 3izc_K 3izs_K 3o58_P 3o5h_P 3u5e_O 3u5i_O 1s1i_M
Probab=21.94 E-value=22 Score=29.42 Aligned_cols=59 Identities=10% Similarity=0.088 Sum_probs=36.3
Q ss_pred hhcCeEEEeecCCcEEeeeechhchhhhccccCCccEEEEEEEEEcCCCcEEEE------e-----ecCCCceecccccC
Q 030138 86 MFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQ------V-----CLFCILWVKTCLSM 154 (182)
Q Consensus 86 M~eE~vdLVDe~d~~iG~~~R~~~Hr~e~i~~~GLlHRAfsVfLFNs~GeLLLQ------q-----~~fPglWDnTcgGH 154 (182)
|.++.|+|+|..|.++|+..=..+.. + ..|. .|.|.|.+. +.|. + ..|||.-.+..-|-
T Consensus 1 ms~~~~vVIDA~g~vLGRLAS~VAk~---L-~~Gd-----~VVVVNaek-i~iTG~k~~~K~yy~h~g~~gg~~~~~~~~ 70 (199)
T 4b6a_O 1 MSSQPVVVIDAKDHLLGRLASTIAKQ---L-LNGQ-----KIVVVRAEE-LNISGEFFRNKLKYHDFLRKATAFNKTRGP 70 (199)
T ss_dssp -CCCSEEEEECTTBBHHHHHHHHHHH---H-HTTC-----EEEEECGGG-CEEESCHHHHHHHHHHHHTCCCTTCTTTSC
T ss_pred CCCCCEEEEECCCCchHHHHHHHHHH---h-cCCC-----EEEEEEchh-eEEeCcHHHHHHHhhccccccccccCCHHH
Confidence 55678999999999999833222211 1 2454 588888754 3332 2 34788777765553
No 112
>3bqa_A Sensor protein PHOQ; histidine kinase sensor domain, ATP-binding, inner membrane, magnesium, membrane, metal-binding, nucleotide-binding; 2.00A {Escherichia coli} PDB: 3bq8_A 1yax_A
Probab=21.93 E-value=42 Score=26.73 Aligned_cols=56 Identities=16% Similarity=-0.038 Sum_probs=35.6
Q ss_pred EEEEEEcCCCcEEEEe--------------ecCCCceecccc----cCcCCCCCHHHHHHhhhhccCceEEEee
Q 030138 125 FSVFLFNSKYELLLQV--------------CLFCILWVKTCL----SMDCHWVVQICGLTWEMTDSNILFVMTH 180 (182)
Q Consensus 125 fsVfLFNs~GeLLLQq--------------~~fPglWDnTcg----GHplaGEs~~eAA~REl~ee~~~~~~t~ 180 (182)
.-|+|+|.+|+||-+| ..=+|++.+.+. .-++.+....+.--.++.+.+=.=-|||
T Consensus 42 tLvlIYDe~G~lLW~qr~vP~le~~I~~eWLkk~gf~Eidtd~~~s~~~L~~~~~~q~~L~~~~~~~~d~~lTH 115 (148)
T 3bqa_A 42 TMTLIYDENGQLLWAQRDVPWLMKMIQPDWLKSNGFHEIEADVNDTSLLLSGDHSIQQQLQEVRQNNNNAQMTH 115 (148)
T ss_dssp CEEEEECTTSCEEEESSCCHHHHHHSCGGGSSSCEEEEEEEEHHHHHHHHCSCHHHHHHHHHHHHTCSSCEEEE
T ss_pred eEEEEEcCCCcEEEecCcchHHHhhcCHHHhcCCCcEEEecCcchHHHHhcCCHHHHHHHHhhcccCCCccceE
Confidence 4588999999999887 223566655432 3345555555555666766655566777
No 113
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=21.89 E-value=46 Score=24.84 Aligned_cols=22 Identities=14% Similarity=0.196 Sum_probs=18.5
Q ss_pred CeEEEeecCCcEEeeeechhch
Q 030138 89 DECILVDENDRVVGHENKYNCH 110 (182)
Q Consensus 89 E~vdLVDe~d~~iG~~~R~~~H 110 (182)
..+.++|++|+++|..++.+.-
T Consensus 131 ~~~~Vvde~g~lvGiIT~~Dil 152 (173)
T 3ocm_A 131 QLVLVADEFGAIEGLVTPIDVF 152 (173)
T ss_dssp CCEEEECTTCCEEEEECHHHHH
T ss_pred eEEEEEeCCCCEEEEEeHHHHH
Confidence 3578889999999999987763
No 114
>1w63_Q Adapter-related protein complex 1 sigma 1A subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=21.44 E-value=60 Score=24.74 Aligned_cols=16 Identities=31% Similarity=0.310 Sum_probs=14.3
Q ss_pred EEEEEEcCCCcEEEEe
Q 030138 125 FSVFLFNSKYELLLQV 140 (182)
Q Consensus 125 fsVfLFNs~GeLLLQq 140 (182)
-.++|+|.+|+.+++|
T Consensus 3 ~~i~Il~~~Gk~~lsk 18 (158)
T 1w63_Q 3 RFMLLFSRQGKLRLQK 18 (158)
T ss_dssp EEEEEECSSSCEEEEE
T ss_pred EEEEEECCCCCEEEEE
Confidence 3678999999999999
No 115
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=20.81 E-value=56 Score=23.01 Aligned_cols=23 Identities=9% Similarity=0.137 Sum_probs=19.4
Q ss_pred CeEEEeecCCcEEeeeechhchh
Q 030138 89 DECILVDENDRVVGHENKYNCHL 111 (182)
Q Consensus 89 E~vdLVDe~d~~iG~~~R~~~Hr 111 (182)
..+.++|++++++|..++.+..+
T Consensus 62 ~~~~Vvd~~~~~~Givt~~dl~~ 84 (149)
T 3k2v_A 62 GMTAICDDDMNIIGIFTDGDLRR 84 (149)
T ss_dssp SEEEEECTTCBEEEEEEHHHHHH
T ss_pred cEEEEECCCCcEEEEecHHHHHH
Confidence 46889999999999999877754
No 116
>3qaj_A Glutamine synthetase; AMP-PCP, ACP, ligase; HET: GLU ADP RGP CIT AMP; 3.05A {Bacillus subtilis}
Probab=20.19 E-value=2.2e+02 Score=25.43 Aligned_cols=89 Identities=13% Similarity=0.096 Sum_probs=57.4
Q ss_pred eEEEeecCCcEEeeeechhchh-hhccccCCccEEEE----EEEEEcC--CCcEEEEeecCCCceecccccCcCCCCCHH
Q 030138 90 ECILVDENDRVVGHENKYNCHL-MEKIESLNLLHRAF----SVFLFNS--KYELLLQVCLFCILWVKTCLSMDCHWVVQI 162 (182)
Q Consensus 90 ~vdLVDe~d~~iG~~~R~~~Hr-~e~i~~~GLlHRAf----sVfLFNs--~GeLLLQq~~fPglWDnTcgGHplaGEs~~ 162 (182)
+|++++.++++...++|....+ .+++...|+..-.+ -.|||+. +|...-....-.|+|+.+ ....++...
T Consensus 93 ~cd~~~~dG~p~~~~pR~iLkr~~~~~~~~G~~~~~~g~E~EF~l~~~~~~g~~~~~~~~~~~y~~~~---~~d~~~~~~ 169 (444)
T 3qaj_A 93 ICDIYNPDGTPFEGDPRNNLKRILKEMEDLGFSDFNLGPEPEFFLFKLDEKGEPTLELNDKGGYFDLA---PTDLGENCR 169 (444)
T ss_dssp EBCCBCTTSCBCSSCHHHHHHHHHHHHHTTTCCEEEEEEEECEEEEEECSSSCEEEEESCCCCTTCCT---TTSCCTTHH
T ss_pred EEEEECCCCCCCCCChHHHHHHHHHHHHHcCCCeeeEEeceEEEEEecCCCCCCCCcCcCCCCccccC---CCcchHHHH
Confidence 6899999999999999988765 23333356521111 1345653 444332222334566554 244678888
Q ss_pred HHHHhhhhccCceEEEeec
Q 030138 163 CGLTWEMTDSNILFVMTHK 181 (182)
Q Consensus 163 eAA~REl~ee~~~~~~t~~ 181 (182)
..+.+.|.+-+|.+-..|.
T Consensus 170 ~~i~~~l~~~Gi~ve~~h~ 188 (444)
T 3qaj_A 170 RDIVLELEEMGFEIEASHH 188 (444)
T ss_dssp HHHHHHHHTTTCCEEEEEE
T ss_pred HHHHHHHHHCCCCeEEeEc
Confidence 9999999999998877774
Done!