Query 030139
Match_columns 182
No_of_seqs 122 out of 1348
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 14:38:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030139.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030139hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1g2q_A Adenine phosphoribosylt 100.0 1.6E-32 5.5E-37 212.2 19.6 172 10-182 4-179 (187)
2 2dy0_A APRT, adenine phosphori 100.0 2.4E-32 8.2E-37 211.7 17.3 170 12-181 14-185 (190)
3 1zn8_A APRT, adenine phosphori 100.0 1.9E-32 6.3E-37 210.4 16.5 171 11-181 4-177 (180)
4 1l1q_A Adenine phosphoribosylt 100.0 9.7E-32 3.3E-36 207.7 17.2 172 10-181 2-176 (186)
5 1qb7_A APRT, adenine phosphori 100.0 6.6E-32 2.2E-36 216.0 16.7 173 9-181 15-203 (236)
6 3m3h_A OPRT, oprtase, orotate 99.9 1E-25 3.5E-30 179.6 12.9 137 32-182 57-197 (234)
7 1y0b_A Xanthine phosphoribosyl 99.9 9E-25 3.1E-29 169.7 16.8 167 11-181 6-179 (197)
8 1vch_A Phosphoribosyltransfera 99.9 2.9E-25 9.8E-30 169.4 11.9 158 15-181 7-170 (175)
9 1o57_A PUR operon repressor; p 99.9 2.2E-24 7.5E-29 177.1 17.9 161 12-181 87-250 (291)
10 3dez_A OPRT, oprtase, orotate 99.9 3.3E-25 1.1E-29 177.5 12.7 137 32-182 69-209 (243)
11 2p1z_A Phosphoribosyltransfera 99.9 3.6E-24 1.2E-28 164.5 11.6 136 32-182 34-173 (180)
12 2yzk_A OPRT, oprtase, orotate 99.9 5.2E-24 1.8E-28 163.3 11.7 134 32-181 27-164 (178)
13 2wns_A Orotate phosphoribosylt 99.9 7.7E-24 2.6E-28 165.8 12.2 135 32-181 31-169 (205)
14 3mjd_A Orotate phosphoribosylt 99.9 2.6E-23 8.9E-28 165.5 12.7 144 20-181 41-202 (232)
15 1lh0_A OMP synthase; loop clos 99.9 3E-23 1E-27 163.3 12.8 133 32-181 33-182 (213)
16 3qw4_B UMP synthase; N-termina 99.9 6E-23 2E-27 177.5 14.8 142 25-181 276-423 (453)
17 2aee_A OPRT, oprtase, orotate 99.9 5.3E-23 1.8E-27 161.6 12.3 136 32-181 37-176 (211)
18 3n2l_A OPRT, oprtase, orotate 99.9 1.1E-22 3.9E-27 162.1 12.8 142 21-181 49-207 (238)
19 2ps1_A Orotate phosphoribosylt 99.9 1.1E-22 3.6E-27 161.5 12.1 134 32-181 37-194 (226)
20 3hvu_A Hypoxanthine phosphorib 99.8 4.8E-20 1.6E-24 144.0 11.8 135 22-165 16-157 (204)
21 1vdm_A Purine phosphoribosyltr 99.8 1.7E-19 5.8E-24 134.4 12.1 120 39-165 4-124 (153)
22 1fsg_A HGPRTASE, hypoxanthine- 99.8 3.7E-19 1.3E-23 141.7 10.9 143 23-165 32-183 (233)
23 1hgx_A HGXPRTASE, hypoxanthine 99.8 8.9E-19 3.1E-23 134.4 10.7 125 33-165 7-136 (183)
24 3lrt_A Ribose-phosphate pyroph 99.8 2.6E-18 8.7E-23 140.5 12.8 115 51-180 143-258 (286)
25 1z7g_A HGPRT, HGPRTASE, hypoxa 99.8 1E-18 3.6E-23 137.7 9.6 133 23-165 18-167 (217)
26 3ozf_A Hypoxanthine-guanine-xa 99.8 1.1E-18 3.8E-23 139.9 8.7 140 26-165 49-197 (250)
27 2jbh_A Phosphoribosyltransfera 99.8 2.9E-18 9.8E-23 135.9 10.2 130 26-165 29-175 (225)
28 2geb_A Hypoxanthine-guanine ph 99.8 4E-18 1.4E-22 131.1 10.4 123 36-165 12-139 (185)
29 3o7m_A Hypoxanthine phosphorib 99.8 8.1E-18 2.8E-22 129.7 12.0 123 34-165 6-135 (186)
30 1pzm_A HGPRT, hypoxanthine-gua 99.8 4.1E-18 1.4E-22 133.8 10.2 124 33-165 20-159 (211)
31 1tc1_A Protein (hypoxanthine p 99.7 2.2E-17 7.5E-22 130.4 13.3 124 35-165 6-144 (220)
32 1yfz_A Hypoxanthine-guanine ph 99.7 1.7E-17 5.8E-22 129.5 10.7 122 37-165 33-159 (205)
33 1u9y_A RPPK;, ribose-phosphate 99.7 7.7E-18 2.6E-22 137.7 8.8 118 50-180 143-261 (284)
34 1a3c_A PYRR, pyrimidine operon 99.7 2.1E-17 7.3E-22 126.3 10.1 124 37-164 4-139 (181)
35 2ywu_A Hypoxanthine-guanine ph 99.7 6.5E-17 2.2E-21 124.1 12.2 120 39-165 12-136 (181)
36 3ohp_A Hypoxanthine phosphorib 99.7 1.2E-16 4.2E-21 122.2 12.7 120 38-164 6-131 (177)
37 3s5j_B Ribose-phosphate pyroph 99.7 4.2E-17 1.4E-21 135.3 10.7 116 51-179 153-268 (326)
38 1nul_A XPRT, xanthine-guanine 99.7 6.3E-17 2.2E-21 120.8 9.7 110 39-164 5-116 (152)
39 1ufr_A TT1027, PYR mRNA-bindin 99.7 1.2E-16 4.2E-21 122.2 10.2 121 39-164 6-137 (181)
40 1wd5_A Hypothetical protein TT 99.7 1.3E-16 4.4E-21 124.7 10.4 121 49-173 9-167 (208)
41 3dah_A Ribose-phosphate pyroph 99.7 8.3E-17 2.8E-21 133.3 9.5 108 60-180 165-272 (319)
42 1dku_A Protein (phosphoribosyl 99.7 3.1E-16 1.1E-20 130.0 10.6 106 60-178 166-271 (317)
43 2ji4_A Phosphoribosyl pyrophos 99.7 1.8E-16 6.1E-21 134.2 9.1 127 50-178 180-326 (379)
44 2xbu_A Hypoxanthine-guanine ph 99.7 1.1E-15 3.6E-20 120.8 12.4 127 38-165 6-161 (221)
45 1w30_A PYRR bifunctional prote 99.6 9.4E-16 3.2E-20 119.4 10.0 123 37-164 13-153 (201)
46 3acd_A Hypoxanthine-guanine ph 99.6 4.8E-15 1.6E-19 113.7 11.5 121 37-164 10-135 (181)
47 1ecf_A Glutamine phosphoribosy 99.5 5.6E-14 1.9E-18 123.0 13.0 115 48-163 277-398 (504)
48 1ao0_A Glutamine phosphoribosy 99.5 9.6E-14 3.3E-18 120.2 8.6 114 45-160 258-374 (459)
49 1dqn_A Guanine phosphoribosylt 99.5 5.9E-14 2E-18 111.3 6.1 111 38-164 33-153 (230)
50 1i5e_A Uracil phosphoribosyltr 99.2 1.1E-10 3.7E-15 91.3 8.9 101 61-174 70-172 (209)
51 1o5o_A Uracil phosphoribosyltr 99.1 1.5E-10 5E-15 91.2 7.5 100 62-174 83-184 (221)
52 2e55_A Uracil phosphoribosyltr 99.0 1.8E-09 6.1E-14 84.3 9.6 99 62-174 69-169 (208)
53 2ehj_A Uracil phosphoribosyltr 99.0 2.3E-09 7.8E-14 83.6 10.0 100 62-174 70-171 (208)
54 1v9s_A Uracil phosphoribosyltr 98.9 1.6E-09 5.6E-14 84.5 6.2 100 62-174 70-171 (208)
55 1bd3_D Uprtase, uracil phospho 98.9 6.1E-09 2.1E-13 83.0 8.2 99 63-174 104-206 (243)
56 3dmp_A Uracil phosphoribosyltr 98.7 2.8E-08 9.7E-13 77.9 6.8 97 63-173 79-178 (217)
57 1xtt_A Probable uracil phospho 98.5 3.7E-07 1.3E-11 71.5 8.3 100 63-173 73-180 (216)
58 3dah_A Ribose-phosphate pyroph 87.4 4.8 0.00016 32.8 9.8 75 69-157 13-91 (319)
59 1u9y_A RPPK;, ribose-phosphate 85.0 5 0.00017 31.9 8.7 73 71-157 8-83 (284)
60 3s5j_B Ribose-phosphate pyroph 84.0 9.9 0.00034 31.0 10.1 74 70-157 10-87 (326)
61 1dku_A Protein (phosphoribosyl 78.2 23 0.00078 28.5 10.4 81 64-158 10-94 (317)
62 2ji4_A Phosphoribosyl pyrophos 70.5 25 0.00087 29.1 8.9 74 70-157 36-116 (379)
63 3lrt_A Ribose-phosphate pyroph 66.3 17 0.00057 29.0 6.7 70 72-157 9-82 (286)
64 3to5_A CHEY homolog; alpha(5)b 56.6 15 0.00052 25.5 4.4 31 122-155 10-40 (134)
65 3f6p_A Transcriptional regulat 47.8 38 0.0013 21.7 5.2 27 124-153 2-28 (120)
66 1r6j_A Syntenin 1; PDZ, membra 47.8 26 0.00088 22.3 4.0 34 120-153 40-73 (82)
67 3gl9_A Response regulator; bet 45.3 44 0.0015 21.5 5.2 26 125-153 3-28 (122)
68 3eod_A Protein HNR; response r 44.2 48 0.0017 21.3 5.3 30 122-154 5-34 (130)
69 4hwg_A UDP-N-acetylglucosamine 42.3 47 0.0016 27.2 5.8 48 43-90 76-123 (385)
70 3h5i_A Response regulator/sens 40.1 53 0.0018 21.6 5.0 28 123-153 4-31 (140)
71 3rsc_A CALG2; TDP, enediyne, s 40.1 65 0.0022 25.7 6.3 42 49-91 106-147 (415)
72 3foj_A Uncharacterized protein 39.4 69 0.0024 20.3 5.3 29 121-152 53-81 (100)
73 3ia7_A CALG4; glycosysltransfe 39.2 74 0.0025 25.1 6.5 41 50-91 91-131 (402)
74 3mm4_A Histidine kinase homolo 37.9 54 0.0019 23.7 5.1 28 122-152 59-86 (206)
75 3hix_A ALR3790 protein; rhodan 37.8 38 0.0013 21.9 3.8 32 122-156 50-81 (106)
76 3lte_A Response regulator; str 37.0 65 0.0022 20.7 5.0 28 123-153 5-32 (132)
77 3ilm_A ALR3790 protein; rhodan 35.7 43 0.0015 23.1 4.0 33 121-156 53-85 (141)
78 1i16_A Interleukin 16, LCF; cy 35.7 38 0.0013 23.0 3.7 39 120-158 75-113 (130)
79 2iya_A OLEI, oleandomycin glyc 34.8 96 0.0033 24.9 6.6 40 50-91 98-137 (424)
80 2jtq_A Phage shock protein E; 34.5 68 0.0023 19.6 4.5 33 122-157 39-71 (85)
81 1wi4_A Synip, syntaxin binding 34.1 46 0.0016 21.9 3.8 37 121-157 60-99 (109)
82 3gk5_A Uncharacterized rhodane 33.5 66 0.0023 20.8 4.5 29 121-152 52-80 (108)
83 1o63_A ATP phosphoribosyltrans 33.5 13 0.00044 28.6 0.9 11 131-141 147-157 (219)
84 1ve4_A ATP phosphoribosyltrans 33.0 13 0.00046 28.2 0.9 18 132-156 153-170 (206)
85 2d92_A INAD-like protein; PDZ 32.9 92 0.0031 20.1 5.2 37 121-157 63-99 (108)
86 3gge_A PDZ domain-containing p 32.8 68 0.0023 21.0 4.4 42 120-161 46-87 (95)
87 1dcf_A ETR1 protein; beta-alph 32.6 93 0.0032 20.1 5.3 29 122-153 5-33 (136)
88 3tum_A Shikimate dehydrogenase 32.6 72 0.0024 24.9 5.2 34 121-158 122-155 (269)
89 2yjn_A ERYCIII, glycosyltransf 32.5 50 0.0017 27.0 4.5 32 57-90 140-171 (441)
90 3o46_A Maguk P55 subfamily mem 31.9 69 0.0023 20.0 4.3 36 121-157 47-82 (93)
91 2j48_A Two-component sensor ki 31.8 90 0.0031 19.1 5.2 11 125-135 2-12 (119)
92 2iyf_A OLED, oleandomycin glyc 31.8 1.2E+02 0.0042 24.2 6.7 40 50-91 93-132 (430)
93 3gt7_A Sensor protein; structu 31.7 84 0.0029 21.1 5.0 28 123-153 6-33 (154)
94 4fzr_A SSFS6; structural genom 31.3 79 0.0027 25.1 5.5 37 52-90 114-150 (398)
95 1z7m_E ATP phosphoribosyltrans 31.0 12 0.00042 28.5 0.4 18 132-156 155-172 (208)
96 3s2u_A UDP-N-acetylglucosamine 30.8 1E+02 0.0035 24.6 6.1 35 56-90 87-121 (365)
97 3t6k_A Response regulator rece 30.7 1.1E+02 0.0036 20.0 5.3 27 124-153 4-30 (136)
98 3otg_A CALG1; calicheamicin, T 30.5 73 0.0025 25.3 5.1 38 51-90 120-157 (412)
99 3grc_A Sensor protein, kinase; 30.4 1.1E+02 0.0036 19.9 5.3 27 124-153 6-32 (140)
100 1o97_C Electron transferring f 30.3 63 0.0021 25.2 4.5 41 49-89 100-144 (264)
101 3hzh_A Chemotaxis response reg 30.3 95 0.0032 20.9 5.1 29 124-155 36-64 (157)
102 3lkv_A Uncharacterized conserv 30.2 1.9E+02 0.0064 22.2 10.7 115 35-156 47-174 (302)
103 1gmx_A GLPE protein; transfera 29.9 51 0.0017 21.3 3.4 33 121-156 55-87 (108)
104 3eme_A Rhodanese-like domain p 29.9 97 0.0033 19.6 4.8 29 121-152 53-81 (103)
105 3hdv_A Response regulator; PSI 29.9 93 0.0032 20.0 4.9 29 123-154 6-34 (136)
106 1efv_B Electron transfer flavo 29.5 66 0.0023 25.0 4.5 41 49-89 104-148 (255)
107 4dad_A Putative pilus assembly 29.3 77 0.0026 20.8 4.4 30 122-154 18-48 (146)
108 2p6p_A Glycosyl transferase; X 29.2 86 0.0029 24.7 5.3 36 53-90 99-134 (384)
109 3m6m_D Sensory/regulatory prot 27.9 87 0.003 20.7 4.5 29 122-153 12-40 (143)
110 3h1g_A Chemotaxis protein CHEY 27.5 79 0.0027 20.4 4.1 27 124-153 5-31 (129)
111 1efp_B ETF, protein (electron 27.0 63 0.0022 25.0 4.0 40 50-89 102-145 (252)
112 3i42_A Response regulator rece 26.8 90 0.0031 19.8 4.3 25 125-152 4-28 (127)
113 3iwh_A Rhodanese-like domain p 26.8 1.2E+02 0.0042 19.5 4.9 33 120-155 52-84 (103)
114 3t4e_A Quinate/shikimate dehyd 26.8 1.1E+02 0.0037 24.4 5.5 32 122-157 146-177 (312)
115 3eul_A Possible nitrate/nitrit 26.7 1.1E+02 0.0039 20.2 4.9 28 122-152 13-40 (152)
116 3kto_A Response regulator rece 25.9 1E+02 0.0034 20.0 4.5 28 124-154 6-33 (136)
117 1kwa_A Hcask/LIN-2 protein; PD 25.9 99 0.0034 19.1 4.2 33 120-152 43-75 (88)
118 2vd3_A ATP phosphoribosyltrans 25.8 21 0.00073 28.6 1.0 18 132-156 160-177 (289)
119 3dzc_A UDP-N-acetylglucosamine 25.8 95 0.0033 25.2 5.1 43 48-90 98-141 (396)
120 2ayx_A Sensor kinase protein R 25.7 54 0.0018 24.7 3.3 32 121-155 8-39 (254)
121 1h3d_A ATP-phosphoribosyltrans 25.3 21 0.00072 28.7 0.9 10 132-141 169-178 (299)
122 3c19_A Uncharacterized protein 25.3 86 0.0029 23.3 4.2 33 130-164 19-52 (186)
123 3kyj_B CHEY6 protein, putative 24.4 90 0.0031 20.5 4.0 26 122-150 11-36 (145)
124 2iwo_A Multiple PDZ domain pro 24.4 1.3E+02 0.0043 20.0 4.7 34 120-153 71-104 (120)
125 1nh8_A ATP phosphoribosyltrans 24.2 23 0.00079 28.6 0.9 17 132-155 174-190 (304)
126 1wg6_A Hypothetical protein (r 24.2 96 0.0033 20.8 4.1 30 121-150 74-103 (127)
127 3e17_A Tight junction protein 24.0 1.2E+02 0.0042 18.7 4.4 33 121-153 40-72 (88)
128 3snk_A Response regulator CHEY 23.9 1.1E+02 0.0036 19.8 4.3 26 123-151 13-38 (135)
129 1mvo_A PHOP response regulator 23.8 1.5E+02 0.005 18.9 5.2 27 124-153 3-29 (136)
130 3vot_A L-amino acid ligase, BL 23.1 77 0.0026 25.8 4.0 45 40-87 57-101 (425)
131 3fet_A Electron transfer flavo 23.0 1.2E+02 0.004 21.8 4.5 41 47-89 57-98 (166)
132 3g5j_A Putative ATP/GTP bindin 22.9 1.1E+02 0.0038 20.0 4.2 29 122-152 86-115 (134)
133 3ot5_A UDP-N-acetylglucosamine 22.8 1.1E+02 0.0037 25.0 4.8 43 48-90 101-144 (403)
134 1tmy_A CHEY protein, TMY; chem 22.8 1.2E+02 0.004 19.0 4.2 27 124-153 2-28 (120)
135 2lpm_A Two-component response 22.6 64 0.0022 21.8 2.9 28 124-154 8-35 (123)
136 1qv9_A F420-dependent methylen 22.5 2E+02 0.0069 22.5 5.9 54 38-91 41-98 (283)
137 3m1f_V VOPL, putative uncharac 22.4 25 0.00087 18.0 0.5 15 9-23 2-16 (31)
138 2b4a_A BH3024; flavodoxin-like 22.4 1.6E+02 0.0055 18.9 5.3 29 122-153 13-41 (138)
139 3hv2_A Response regulator/HD d 22.3 1.4E+02 0.0049 19.7 4.8 29 122-153 12-40 (153)
140 1g9o_A NHE-RF; PDZ domain, com 22.1 1.4E+02 0.0048 18.2 4.4 33 121-153 45-77 (91)
141 3rqi_A Response regulator prot 21.9 1.6E+02 0.0056 20.4 5.2 27 124-153 7-33 (184)
142 3r68_A Na(+)/H(+) exchange reg 21.9 1.1E+02 0.0039 18.8 3.9 34 121-154 47-80 (95)
143 2rjn_A Response regulator rece 21.0 1.8E+02 0.0062 19.1 5.1 28 123-153 6-33 (154)
144 3tsa_A SPNG, NDP-rhamnosyltran 20.8 1.5E+02 0.0051 23.3 5.2 38 51-90 104-141 (391)
145 3jte_A Response regulator rece 20.8 1.7E+02 0.0059 18.8 4.9 25 125-152 4-28 (143)
146 3dfz_A SIRC, precorrin-2 dehyd 20.7 1.4E+02 0.0046 22.6 4.7 30 122-155 29-58 (223)
147 1v6b_A Harmonin isoform A1; st 20.6 1.6E+02 0.0055 19.3 4.6 41 120-160 61-104 (118)
148 1jbe_A Chemotaxis protein CHEY 20.2 1.5E+02 0.0051 18.7 4.4 18 124-141 4-21 (128)
149 2hhg_A Hypothetical protein RP 20.2 1.2E+02 0.0042 20.2 4.0 33 121-156 83-115 (139)
150 2byg_A Channel associated prot 20.0 1.4E+02 0.0047 19.6 4.2 36 121-157 73-108 (117)
No 1
>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A
Probab=100.00 E-value=1.6e-32 Score=212.17 Aligned_cols=172 Identities=40% Similarity=0.749 Sum_probs=150.4
Q ss_pred chHHHHHhhccccCCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcC----CCccEEEeeCCCChhhHHHHHHHhCC
Q 030139 10 DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD----KNISVVAGIEARGFIFGPPIALAIGA 85 (182)
Q Consensus 10 ~~~~~~l~~~~r~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~----~~~d~Iv~v~~~G~~~a~~la~~l~v 85 (182)
.+.++.|++.+|..|+||.||+.|+|+..++.+++.++.+++.|++.+.+ .++|+|+|++.||+++|..+|+.+++
T Consensus 4 ~~~~~~l~~~~~~~~~~p~~g~~~~d~~~~l~~~~~~~~~~~~La~~i~~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~~ 83 (187)
T 1g2q_A 4 ASYAQELKLALHQYPNFPSEGILFEDFLPIFRNPGLFQKLIDAFKLHLEEAFPEVKIDYIVGLESRGFLFGPTLALALGV 83 (187)
T ss_dssp HHHHHHHHHHCEEETTCSSTTCCEEECHHHHHSHHHHHHHHHHHHHHHHHHCTTSCCCEEEEETTTHHHHHHHHHHHHTC
T ss_pred hHHHHHHHHhcccCCCCCCCCEEEEehHhhhcCHHHHHHHHHHHHHHHhhhcccCCCCEEEEEccCcHHHHHHHHHHHCC
Confidence 35678899999999999999999999999999999999999999998875 46899999999999999999999999
Q ss_pred CeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 030139 86 KFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 165 (182)
Q Consensus 86 p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~ 165 (182)
|+..+||.++.++...+..++.+++.+.+.+..+...+|++||||||++|||+|+.++++.|+++|++++++++++++.+
T Consensus 84 p~~~~rk~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~ 163 (187)
T 1g2q_A 84 GFVPVRKAGKLPGECFKATYEKEYGSDLFEIQKNAIPAGSNVIIVDDIIATGGSAAAAGELVEQLEANLLEYNFVMELDF 163 (187)
T ss_dssp EEEEEEETTCSCSSEEEEEEECSSCEEEEEEETTSSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECCC
T ss_pred CEEEEEEeCCCCcceecHHHHHHhCCCcEEEecccCCCcCEEEEECCCcccHHHHHHHHHHHHHcCCeEEEEEEEEEccC
Confidence 99888887665655555555545555667766555578999999999999999999999999999999999999999987
Q ss_pred cccccccCCCCcccccC
Q 030139 166 LKGRERLGEKPLFVLVS 182 (182)
Q Consensus 166 ~~~~~~l~~~~~~~l~~ 182 (182)
.+|++++ ++|++||++
T Consensus 164 ~~g~~~l-~~~~~sl~~ 179 (187)
T 1g2q_A 164 LKGRSKL-NAPVFTLLN 179 (187)
T ss_dssp SSCCCCC-SSCEEECC-
T ss_pred cCchhhc-CccEEEEEE
Confidence 7788888 899999874
No 2
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}
Probab=100.00 E-value=2.4e-32 Score=211.70 Aligned_cols=170 Identities=51% Similarity=0.916 Sum_probs=149.5
Q ss_pred HHHHHhhccccCCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEeee
Q 030139 12 RIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMR 91 (182)
Q Consensus 12 ~~~~l~~~~r~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~r 91 (182)
.++.|.+.+|..|+||.+|+.|+|+..++.+++.++.+++.|++.+.+.++|+|+|+|.+||++|..+|+.+++|+...|
T Consensus 14 ~~~~l~~~i~~~p~~~~~g~~~~d~~~~~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~rG~~~a~~la~~l~~p~~~~r 93 (190)
T 2dy0_A 14 QLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVR 93 (190)
T ss_dssp HHHHHHHHSEEETTCSSTTCCEEETHHHHHCHHHHHHHHHHHHHHHTTTTCCEEEEETTHHHHHHHHHHHHHTCEEEEEB
T ss_pred HHHHHHHHHhhCCCCCCCCeEEEeChhhhcCHHHHHHHHHHHHHHhccCCCCEEEEECcccHHHHHHHHHHHCCCEEEEE
Confidence 57789999999999999999999999999999999999999999997767899999999999999999999999998888
Q ss_pred ccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccc
Q 030139 92 KPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRER 171 (182)
Q Consensus 92 k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~ 171 (182)
|+++.++...+..++.+++.+.+.+..+...+|++||||||++|||+|+.++++.|+++|++++.+++++++.+.+++++
T Consensus 94 k~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~gk~VLlVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~~~~~~ 173 (190)
T 2dy0_A 94 KPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQR 173 (190)
T ss_dssp STTCCCSCEEEEEEEETTEEEEEEEEGGGCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEEGGGCHHHH
T ss_pred ecCCCCcccccceehhhcCceEEEEeccccCCcCEEEEEEccccchHHHHHHHHHHHHcCCEEEEEEEEEEccCcchHHH
Confidence 87766665555555545555567665445578999999999999999999999999999999999999999987778999
Q ss_pred cC--CCCccccc
Q 030139 172 LG--EKPLFVLV 181 (182)
Q Consensus 172 l~--~~~~~~l~ 181 (182)
|. +.|+++|+
T Consensus 174 l~~~g~~v~sl~ 185 (190)
T 2dy0_A 174 LEKQGITSYSLV 185 (190)
T ss_dssp HHTTTCEEEEEE
T ss_pred HhhCCCcEEEEE
Confidence 87 57888876
No 3
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*
Probab=100.00 E-value=1.9e-32 Score=210.43 Aligned_cols=171 Identities=44% Similarity=0.825 Sum_probs=149.4
Q ss_pred hHHHHHhhccccCCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcCC---CccEEEeeCCCChhhHHHHHHHhCCCe
Q 030139 11 PRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDK---NISVVAGIEARGFIFGPPIALAIGAKF 87 (182)
Q Consensus 11 ~~~~~l~~~~r~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~~---~~d~Iv~v~~~G~~~a~~la~~l~vp~ 87 (182)
+.++.|.+.+|..|+||.+|+.|+|...++.+++.++.+++.|++.+... ++|+|+|++.+|+++|..+|..+++|+
T Consensus 4 ~~~~~l~~~i~~~~~~p~~g~~~~d~~~~l~~~~~~~~la~~l~~~~~~~~~~~~d~vv~v~~~G~~~a~~la~~l~~p~ 83 (180)
T 1zn8_A 4 SELQLVEQRIRSFPDFPTPGVVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDYIAGLDSRGFLFGPSLAQELGLGC 83 (180)
T ss_dssp HHHHHHHTTCEEEETCSSTTCEEEECHHHHHSHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTTHHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHhcCCCCCcCCeEEEecHHHhcCHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHhCCCE
Confidence 66888999999999999999999999999999999999999999887642 389999999999999999999999999
Q ss_pred EeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcc
Q 030139 88 VPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELK 167 (182)
Q Consensus 88 ~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~ 167 (182)
...|+.++.++...+..++.+++.+.+.+..+...+|++||||||++|||+|+.++++.|+++|++++.+++++++++.+
T Consensus 84 ~~~r~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~~~ 163 (180)
T 1zn8_A 84 VLIRKRGKLPGPTLWASYSLEYGKAELEIQKDALEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTSLK 163 (180)
T ss_dssp EEEEETTCCCSSEEEEEEEETTEEEEEEEETTSSCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEEEGGGC
T ss_pred EEEEecCCCCcccccHHHHHhcCccEEEEeccccCCCCEEEEEcCCcccHHHHHHHHHHHHHcCCEEEEEEEEEEccCcc
Confidence 88887766555555555554445556766545457899999999999999999999999999999999999999998778
Q ss_pred cccccCCCCccccc
Q 030139 168 GRERLGEKPLFVLV 181 (182)
Q Consensus 168 ~~~~l~~~~~~~l~ 181 (182)
+++++.+.|+++|+
T Consensus 164 ~~~~l~~~~~~sl~ 177 (180)
T 1zn8_A 164 GREKLAPVPFFSLL 177 (180)
T ss_dssp HHHHHTTSCEEEEE
T ss_pred hhhhhcCCceEEEE
Confidence 89999999999886
No 4
>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, cataly transferase; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A*
Probab=100.00 E-value=9.7e-32 Score=207.70 Aligned_cols=172 Identities=38% Similarity=0.622 Sum_probs=148.4
Q ss_pred chHHHHHhhccccCCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEe
Q 030139 10 DPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVP 89 (182)
Q Consensus 10 ~~~~~~l~~~~r~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~ 89 (182)
.++++.|++.+|.+|+||.+|+.|.|+..++.+++.++.+++.|++.+...++|+|+|+|.|||++|..+|+.+++|+..
T Consensus 2 ~~~~~~l~~~~~~~p~~p~~g~~~~d~~~~l~~~~~~~~l~~~la~~~~~~~~d~Iv~vp~rG~~~A~~la~~l~~p~~~ 81 (186)
T 1l1q_A 2 TMSVADAHALIKTIPDFPTKGIAFKDLSDILSTPAALDAVRKEVTAHYKDVPITKVVGIESRGFILGGIVANSLGVGFVA 81 (186)
T ss_dssp CCCHHHHHHTCEEETTCSSTTCCEEECHHHHTCHHHHHHHHHHHHHHTTTSCCCEEEEESGGGHHHHHHHHHHHTCEEEE
T ss_pred chhHHHHHhhhccCCCCCCCCeEEEEhHHHhCCHHHHHHHHHHHHHHhhccCCCEEEEcCcccHHHHHHHHHHhCCCEEE
Confidence 35678899999999999999999999999999999999999999998876678999999999999999999999999988
Q ss_pred eeccCCCCCceeeeeeeeeccce-eEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCe--EEEEEEEEecCCc
Q 030139 90 MRKPKKLPGEVISEEYSLEYGKD-VMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVH--VVECACVIELPEL 166 (182)
Q Consensus 90 ~rk~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~--~v~v~~l~~~~~~ 166 (182)
.||+++.++...+..|+.+++.. .+.+..+...+|++||||||++|||+|+.++++.|+++|++ ++.+++++++.+.
T Consensus 82 ~rk~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~gk~VLLVDDVitTG~Tl~aa~~~L~~~Ga~~~~V~~~~l~~k~~~ 161 (186)
T 1l1q_A 82 LRKAGKLPGDVCKCTFDMEYQKGVTIEVQKRQLGPHDVVLLHDDVLATGGTLLAAIELCETAGVKPENIYINVLYEIEAL 161 (186)
T ss_dssp EEETTSSCSSEEEEEEEETTEEEEEEEEEGGGCCTTCCEEEEEEEESSSHHHHHHHHHHHHTTCCGGGEEEEEEEECGGG
T ss_pred EEecCCCCCceechhhhhhcCcceEEEEecccCCCcCEEEEEecccccHHHHHHHHHHHHHcCCCcceEEEEEEEEccCc
Confidence 88877666555444444333333 56665444568999999999999999999999999999999 9999999999877
Q ss_pred ccccccCCCCccccc
Q 030139 167 KGRERLGEKPLFVLV 181 (182)
Q Consensus 167 ~~~~~l~~~~~~~l~ 181 (182)
+|++++.++++.+++
T Consensus 162 ~g~~~l~~~~~~~~~ 176 (186)
T 1l1q_A 162 KGREKVGQKCTRLFS 176 (186)
T ss_dssp CHHHHHTTTCCCEEE
T ss_pred cHHHHHhhcCcceeh
Confidence 899999998877664
No 5
>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A*
Probab=100.00 E-value=6.6e-32 Score=215.95 Aligned_cols=173 Identities=31% Similarity=0.576 Sum_probs=150.9
Q ss_pred cchHHHHHhhccccC-CCCCCCCc-eEEechhhhcCHHHHHHHHHHHHHHhcCC--CccEEEeeCCCChhhHHHHHHHhC
Q 030139 9 QDPRIAGISSAIRVI-PDFPKPGI-MFQDITTLLLDTKAFRDTIDLFVERYKDK--NISVVAGIEARGFIFGPPIALAIG 84 (182)
Q Consensus 9 ~~~~~~~l~~~~r~~-~~~~~~~~-~~~d~~~l~~~~~~~~~~~~~la~~~~~~--~~d~Iv~v~~~G~~~a~~la~~l~ 84 (182)
-++..++|++.+|+. |+||.+|+ .|+|+..++.+++.++.+++.|++.+.+. ++|+|+|++.||+++|..+|..++
T Consensus 15 ~~~~~~~l~~~i~~~~~dfp~~gip~~~D~~~ll~~~~~~~~~~~~la~~i~~~~~~~d~Ivgv~~gG~~~a~~lA~~L~ 94 (236)
T 1qb7_A 15 SHALSQLLKKSYRWYSPVFSPRNVPRFADVSSITESPETLKAIRDFLVQRYRAMSPAPTHILGFDARGFLFGPMIAVELE 94 (236)
T ss_dssp TSHHHHHHHHHCCEECGGGSSSCSSSEECTHHHHTCHHHHHHHHHHHHHHHHHCSSCCSEEEEETTGGGGTHHHHHHHHT
T ss_pred ChHHHHHHHHHhcccCCCCCCCCCEeEEEhHhhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEECcCcHHHHHHHHHHhC
Confidence 356788999999999 99999999 99999999999999999999999988764 789999999999999999999999
Q ss_pred CCeEeeeccCCCCCcee-eeeeeeec---cceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEE
Q 030139 85 AKFVPMRKPKKLPGEVI-SEEYSLEY---GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACV 160 (182)
Q Consensus 85 vp~~~~rk~~~~~~~~~-~~~~~~~~---~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l 160 (182)
+|+.+.||.++.++... +..|..++ +.+.+++..+...+|++||||||++|||+|+.+++++|+++|+++++++++
T Consensus 95 ~p~~~~rk~~k~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l 174 (236)
T 1qb7_A 95 IPFVLMRKADKNAGLLIRSEPYEKEYKEAAPEVMTIRYGSIGKGSRVVLIDDVLATGGTALSGLQLVEASDAVVVEMVSI 174 (236)
T ss_dssp CCEEEEBCGGGCCSSEEECCCCCCCTTSCCCCCCEEETTSSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCEEEEEEecCCCCcceeceeccchhhhcCcceEEEecCCCCCcCEEEEEecccccHHHHHHHHHHHHHcCCeEEEEEEE
Confidence 99999888776655544 44454444 344566665555799999999999999999999999999999999999999
Q ss_pred EecCCcccccccC--------CCCccccc
Q 030139 161 IELPELKGRERLG--------EKPLFVLV 181 (182)
Q Consensus 161 ~~~~~~~~~~~l~--------~~~~~~l~ 181 (182)
+++.+.+|++++. ++|+++|+
T Consensus 175 ~~~~~~~g~~~l~~~~~~~~~g~~v~sl~ 203 (236)
T 1qb7_A 175 LSIPFLKAAEKIHSTANSRYKDIKFISLL 203 (236)
T ss_dssp EECGGGCHHHHHHHHHHHTTTTCCEEEEE
T ss_pred EEcccccHHHHHhhhcccccCCCcEEEEE
Confidence 9998878889987 68898886
No 6
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=99.93 E-value=1e-25 Score=179.57 Aligned_cols=137 Identities=20% Similarity=0.328 Sum_probs=111.6
Q ss_pred eEEechhhhcCHHHHHHHHHHHHHHhcCC--CccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeec
Q 030139 32 MFQDITTLLLDTKAFRDTIDLFVERYKDK--NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEY 109 (182)
Q Consensus 32 ~~~d~~~l~~~~~~~~~~~~~la~~~~~~--~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~ 109 (182)
.|+|...++.+|+.++.+++.|++.+.+. ++|+|+|++.+|+++|..+|..+++|+.++||..+..+.
T Consensus 57 ~Y~d~~~~~~~p~~~~~l~~~la~~i~~~~~~~D~Ivg~~~gGi~~a~~lA~~L~~p~~~vrk~~k~~G~---------- 126 (234)
T 3m3h_A 57 IYCDNRLTLSYPKVRQTIAAGLEELIKEHFPTVEVIAGTATAGIAHAAWVSDRMDLPMCYVRSKAKGHGK---------- 126 (234)
T ss_dssp EEECGGGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEC---CHHHHHHHHHHHTCCEEEEC------------------
T ss_pred EEEeCHHhccCHHHHHHHHHHHHHHHHHhCCCCCEEEEeccchHHHHHHHHHHcCCCEEEEEEeeccCCc----------
Confidence 78999999999999999999999988763 789999999999999999999999999999887542221
Q ss_pred cceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccC--CCCcccccC
Q 030139 110 GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG--EKPLFVLVS 182 (182)
Q Consensus 110 ~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~--~~~~~~l~~ 182 (182)
.. .+ .+...+|++||||||++|||+|+.+++++|+++|++++++++++++...++.+++. +.|+++|++
T Consensus 127 --~~-~i-~g~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~~~~~~~~~e~l~~~gi~v~sL~~ 197 (234)
T 3m3h_A 127 --GN-QI-EGKAEKGQKVVVVEDLISTGGSAITCVEALREAGCEVLGIVSIFTYELEAGKEKLEAANVASYSLSD 197 (234)
T ss_dssp ---C-CE-ESCCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHTTCCEEESSC
T ss_pred --ce-EE-ecccCCCCEEEEEecccchhHHHHHHHHHHHHCCCEEEEEEEEEECcCchHHHHHHhcCCCEEEEee
Confidence 11 01 14557899999999999999999999999999999999999999998778888885 478888864
No 7
>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*
Probab=99.93 E-value=9e-25 Score=169.72 Aligned_cols=167 Identities=21% Similarity=0.296 Sum_probs=127.8
Q ss_pred hHHHHHhhccccCCCCCCCCceEEe-chhhhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEe
Q 030139 11 PRIAGISSAIRVIPDFPKPGIMFQD-ITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVP 89 (182)
Q Consensus 11 ~~~~~l~~~~r~~~~~~~~~~~~~d-~~~l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~ 89 (182)
..+++|.+.-++.++ ++.|.| +.+...++..++.+++.|++.+...++|+|+|+|.||+++|..+|+.+++|+..
T Consensus 6 ~l~~~l~~~~~~~~g----~~l~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~rG~~~a~~la~~l~~p~~~ 81 (197)
T 1y0b_A 6 ALKRKIEEEGVVLSD----QVLKVDSFLNHQIDPLLMQRIGDEFASRFAKDGITKIVTIESSGIAPAVMTGLKLGVPVVF 81 (197)
T ss_dssp HHHHHHHHHCEEETT----TEEECTTTTSSEECHHHHHHHHHHHHHHTTTTTCCEEEEETTTTHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHhhCCEecCC----CEEEehhhhcccCCHHHHHHHHHHHHHHhhcCCCCEEEEEcccCHHHHHHHHHHhCCCEEE
Confidence 445666666666655 554432 122346899999999999999876678999999999999999999999999988
Q ss_pred eeccCCCC--Cceeee-eeeeecc-ceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 030139 90 MRKPKKLP--GEVISE-EYSLEYG-KDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 165 (182)
Q Consensus 90 ~rk~~~~~--~~~~~~-~~~~~~~-~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~ 165 (182)
.|+.++.+ +..... .+..+.+ ...+.+..+...+|++||||||++|||+|+.++++.|+++|++.+.+++++++.+
T Consensus 82 ~rk~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~ 161 (197)
T 1y0b_A 82 ARKHKSLTLTDNLLTASVYSFTKQTESQIAVSGTHLSDQDHVLIIDDFLANGQAAHGLVSIVKQAGASIAGIGIVIEKSF 161 (197)
T ss_dssp EBSSCCSSCCSSEEEEEEEETTTTEEEEEEEEGGGCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEETT
T ss_pred EEecCCCCCCCceEEEeeeccccCceEEEEEeccccCCcCEEEEEEcccccCHHHHHHHHHHHHCCCEEEEEEEEEEecc
Confidence 88776544 332221 2221222 2335554344468999999999999999999999999999999999999999987
Q ss_pred cccccccC--CCCccccc
Q 030139 166 LKGRERLG--EKPLFVLV 181 (182)
Q Consensus 166 ~~~~~~l~--~~~~~~l~ 181 (182)
.+++++|. +.|+++|+
T Consensus 162 ~~~~~~l~~~~~~~~sl~ 179 (197)
T 1y0b_A 162 QPGRDELVKLGYRVESLA 179 (197)
T ss_dssp STHHHHHHHTTCCEEEEE
T ss_pred cchhhhHHhcCCcEEEEE
Confidence 78889887 46788875
No 8
>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.92 E-value=2.9e-25 Score=169.38 Aligned_cols=158 Identities=20% Similarity=0.250 Sum_probs=123.4
Q ss_pred HHhhccccCCCCCCC-CceEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEeeecc
Q 030139 15 GISSAIRVIPDFPKP-GIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKP 93 (182)
Q Consensus 15 ~l~~~~r~~~~~~~~-~~~~~d~~~l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~ 93 (182)
.|++.+|.+|+|+.+ |+ |++...+..+++.++.+++.|++.+.. ++|+|+|++.||+++|..+|+.+++|+...+|+
T Consensus 7 ~~~~~~~~~~~~~~~~g~-~i~~~k~~~~~~~~~~~~~~la~~~~~-~~d~Iv~v~~gg~~~a~~la~~l~~p~~~~rk~ 84 (175)
T 1vch_A 7 TVGGVTRHVPLIEPLPGR-RIPLVEFLGDPEFTRAAAEALRPLVPK-EAEILFTTETSPIPLTHVLAEALGLPYVVARRR 84 (175)
T ss_dssp EETTEEEEECEEEEETTE-EEECCCCTTCHHHHHHHHHHHGGGSCT-TCCEEEEESSTHHHHHHHHHHHHTCCEEEEBSS
T ss_pred EecceeeEcCceEcCCCc-EEEeeeccCCHHHHHHHHHHHHHHhcc-CCCEEEEeCCcChHHHHHHHHHhCCCEEEEEec
Confidence 477899999999976 64 689999999999999999999988865 789999999999999999999999999888776
Q ss_pred CCC--CCceeeeeeeeecc-ceeEEEEcccc--CCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCccc
Q 030139 94 KKL--PGEVISEEYSLEYG-KDVMEMHVGAV--QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKG 168 (182)
Q Consensus 94 ~~~--~~~~~~~~~~~~~~-~~~~~l~~~~~--~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~ 168 (182)
.+. +.......+..+.+ .+.+.+..+.. .+|++||||||++|||+|+.++++.|+++|++.+.+++++++...
T Consensus 85 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~v~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~V~~~~l~~~~~~-- 162 (175)
T 1vch_A 85 RRPYMEDPIIQEVQTLTLGVGEVLWLDRRFAEKLLNQRVVLVSDVVASGETMRAMEKMVLRAGGHVVARLAVFRQGTP-- 162 (175)
T ss_dssp CCTTCCSCEEEECCC------CEEEECHHHHHHHTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECSCC--
T ss_pred CCCCCCcceeeeeeccccCCceEEEEecccccccCCCEEEEEeccccchHHHHHHHHHHHHcCCeEEEEEEEEecCCC--
Confidence 543 22111111111111 23455433222 489999999999999999999999999999999999999998642
Q ss_pred ccccCCCCccccc
Q 030139 169 RERLGEKPLFVLV 181 (182)
Q Consensus 169 ~~~l~~~~~~~l~ 181 (182)
..|+++|+
T Consensus 163 -----~~~~~sl~ 170 (175)
T 1vch_A 163 -----GLAVDTVA 170 (175)
T ss_dssp -----SSCCEEEE
T ss_pred -----CcceEEEE
Confidence 56666664
No 9
>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A*
Probab=99.92 E-value=2.2e-24 Score=177.07 Aligned_cols=161 Identities=23% Similarity=0.407 Sum_probs=123.7
Q ss_pred HHHHHhhccccCCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEeee
Q 030139 12 RIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMR 91 (182)
Q Consensus 12 ~~~~l~~~~r~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~r 91 (182)
.++.|.+.-+.+|+ + |.+...++.+|..++.+++.+++.+.+.++|+|+|+|.+|+++|..+|+.+++|+.+.|
T Consensus 87 l~~~l~~~~~v~~G----~--f~~~~~ll~~p~l~~~la~~la~~~~~~~~d~Iv~V~~rG~~~A~~lA~~L~vp~v~~r 160 (291)
T 1o57_A 87 LGQSLANPERILPG----G--YVYLTDILGKPSVLSKVGKLFASVFAEREIDVVMTVATKGIPLAYAAASYLNVPVVIVR 160 (291)
T ss_dssp HHHHHTCGGGEETT----T--EECCTTTTTCHHHHHHHHHHHHHHTTTSCCSEEEEETTTTHHHHHHHHHHHTCCEEEEB
T ss_pred HHHHHHHCCCcccC----C--eEEehhhhCCHHHHHHHHHHHHHHhhccCCCEEEEECCCCHHHHHHHHHHhCCCEEEEE
Confidence 34444444455555 5 45688899999999999999999997777899999999999999999999999999888
Q ss_pred ccCCC-CCceeeeeeeeec--cceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCccc
Q 030139 92 KPKKL-PGEVISEEYSLEY--GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKG 168 (182)
Q Consensus 92 k~~~~-~~~~~~~~~~~~~--~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~ 168 (182)
|.++. ++...+..|.... ....+.+......+|++||||||++|||+|+.++++.|+++||+++++++++++.+.
T Consensus 161 k~~~~t~~~~~~~~~~~g~~~~~~~~~l~~~~l~~Gk~VLIVDDViTTG~Tl~~a~~~L~~aGA~vV~v~vlvdr~~~-- 238 (291)
T 1o57_A 161 KDNKVTEGSTVSINYVSGSSNRIQTMSLAKRSMKTGSNVLIIDDFMKAGGTINGMINLLDEFNANVAGIGVLVEAEGV-- 238 (291)
T ss_dssp CC-----CCEEEEEEECSSCCSEEEEEEEGGGSCTTCEEEEEEEEESSSHHHHHHHHHTGGGTCEEEEEEEEEEESSC--
T ss_pred EeccCCCCceeeeeeecccccceeeEEEecccCCCcCEEEEEEEEcCcHHHHHHHHHHHHHCCCEEEEEEEEEEcCcc--
Confidence 77654 3444443342211 123466655455799999999999999999999999999999999999999999753
Q ss_pred ccccCCCCccccc
Q 030139 169 RERLGEKPLFVLV 181 (182)
Q Consensus 169 ~~~l~~~~~~~l~ 181 (182)
++++. .|++||+
T Consensus 239 ~~~l~-~~~~SL~ 250 (291)
T 1o57_A 239 DERLV-DEYMSLL 250 (291)
T ss_dssp TTSCC-SCCEEEE
T ss_pred ccccC-CceEEEE
Confidence 44443 6788775
No 10
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=99.92 E-value=3.3e-25 Score=177.46 Aligned_cols=137 Identities=23% Similarity=0.347 Sum_probs=117.1
Q ss_pred eEEechhhhcCHHHHHHHHHHHHHHhcCC--CccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeec
Q 030139 32 MFQDITTLLLDTKAFRDTIDLFVERYKDK--NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEY 109 (182)
Q Consensus 32 ~~~d~~~l~~~~~~~~~~~~~la~~~~~~--~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~ 109 (182)
.|+|...++.+|+.++.+++.|++.+.+. ++|+|+|++.+|+++|..+|..+++|+.++||.++..+..
T Consensus 69 ~Y~d~~~~l~~p~~~~~l~~~la~~i~~~~~~~DvIvg~~~gGi~~A~~lA~~L~~p~~~vrk~~k~~G~~--------- 139 (243)
T 3dez_A 69 IYTDNRITLSYPETRTLIENGFVETIKEAFPEVEVIAGTATAGIPHGAIIADKMNLPLAYIRSKPKDHGAG--------- 139 (243)
T ss_dssp EEECTTGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEETTTTHHHHHHHHHHTTCCEEEECSSCC--------------
T ss_pred EEEeCHHhccCHHHHHHHHHHHHHHHHhhCCCCCEEEEecCchHHHHHHHHHHcCCCEEEEEEeeccCCce---------
Confidence 68999999999999999999999988763 7999999999999999999999999999998876532210
Q ss_pred cceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccC--CCCcccccC
Q 030139 110 GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG--EKPLFVLVS 182 (182)
Q Consensus 110 ~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~--~~~~~~l~~ 182 (182)
..+ .+...+|++||||||++|||+|+.+++++|+++|++++++++++++...++++++. +.++++|++
T Consensus 140 --~~i---eg~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~d~~~~~a~e~l~~~gi~~~sL~~ 209 (243)
T 3dez_A 140 --NQI---EGRVTKGQKMVIIEDLISTGGSVLDAVAAAQREGADVLGVVAIFTYELPKATANFEKASVKLVTLSN 209 (243)
T ss_dssp --CCE---ESCCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHHTCCEEESSC
T ss_pred --eEE---EeccCCCCEEEEEEeeccccHHHHHHHHHHHHCCCEEEEEEEEEECCCchHHHHHHhcCCCEEEEee
Confidence 011 14558899999999999999999999999999999999999999998778888886 467888763
No 11
>2p1z_A Phosphoribosyltransferase; STRU genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.44A {Corynebacterium diphtheriae}
Probab=99.91 E-value=3.6e-24 Score=164.46 Aligned_cols=136 Identities=21% Similarity=0.287 Sum_probs=111.4
Q ss_pred eEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCe--EeeeccCCCCCceeeeeeeeec
Q 030139 32 MFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKF--VPMRKPKKLPGEVISEEYSLEY 109 (182)
Q Consensus 32 ~~~d~~~l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~--~~~rk~~~~~~~~~~~~~~~~~ 109 (182)
.|+|...++.+|+.++.+++.|++.+.+.++|+|+|+|.+|+++|..+|+.+++|+ .+.|+..+. +
T Consensus 34 ~y~d~~~~~~~~~~~~~l~~~la~~i~~~~~d~vv~v~~gG~~~a~~la~~l~~~~~~~~~rk~~~~------------~ 101 (180)
T 2p1z_A 34 YYVDLRRATLHARASRLIGELLRELTADWDYVAVGGLTLGADPVATSVMHADGREIHAFVVRKEAKK------------H 101 (180)
T ss_dssp -CCCTHHHHTSHHHHHHHHHHHHHTTTTSCCSEEEEETTTHHHHHHHHHHSSSSCCEEEEECSCCC-------------C
T ss_pred EEEEChhhcCCHHHHHHHHHHHHHHHhhcCCCEEEEecCCCHHHHHHHHHHHCCCCCeEEEEecccc------------c
Confidence 57899999999999999999999998777899999999999999999999998764 555554321 1
Q ss_pred cceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccC--CCCcccccC
Q 030139 110 GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG--EKPLFVLVS 182 (182)
Q Consensus 110 ~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~--~~~~~~l~~ 182 (182)
+... .+. +...+|++|+||||++|||+|+.++++.|+++|++++++++++++.+ ++++++. ++|++||+.
T Consensus 102 g~~~-~~~-g~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~-~g~~~l~~~g~~~~sl~~ 173 (180)
T 2p1z_A 102 GMQR-RIE-GPDVVGKKVLVVEDTTTTGNSPLTAVKALREAGAEVVGVATVVDRAT-GAADVIAAEGLEYRYILG 173 (180)
T ss_dssp C-CC-SEE-SSCCTTCEEEEEEEECSSSHHHHHHHHHHHHHTCEEEEEEEEEC-CC-CHHHHHHTTTCCEEEEEC
T ss_pred cchh-hcc-CCCCCcCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEcCc-chHHHHHhcCCeEEEEEE
Confidence 1111 011 34478999999999999999999999999999999999999999975 7888885 588998864
No 12
>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix}
Probab=99.91 E-value=5.2e-24 Score=163.27 Aligned_cols=134 Identities=24% Similarity=0.362 Sum_probs=112.2
Q ss_pred eEEechhhhcCHHHHHHHHHHHHHHh-cCC-CccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeec
Q 030139 32 MFQDITTLLLDTKAFRDTIDLFVERY-KDK-NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEY 109 (182)
Q Consensus 32 ~~~d~~~l~~~~~~~~~~~~~la~~~-~~~-~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~ 109 (182)
.|.|+..++.+|+..+.++..+++.+ .+. ++|+|+|++.||+++|..+|+.+++|+.+.|+..+. +
T Consensus 27 ~f~d~~~l~~~~~~~~~l~~~l~~~~~~~~~~~~~iv~v~~~G~~~a~~la~~l~~p~~~~r~~~~~------------~ 94 (178)
T 2yzk_A 27 VYIDMRRLLGDESSYSVALDLLLEVGGQDLARSSAVIGVATGGLPWAAMLALRLSKPLGYVRPERKG------------H 94 (178)
T ss_dssp EEECGGGGTTCHHHHHHHHHHHHHHHHHHHHHCSEEEEETTTTHHHHHHHHHHHTCCEEEECCCCTT------------S
T ss_pred eEEEChHhccCHHHHHHHHHHHHHHHhcccCCCCEEEEecccchHHHHHHHHHHCCCEEEEEccccc------------c
Confidence 58899999999999999999999888 553 689999999999999999999999999887765431 1
Q ss_pred cceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccC--CCCccccc
Q 030139 110 GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG--EKPLFVLV 181 (182)
Q Consensus 110 ~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~--~~~~~~l~ 181 (182)
+... .+ .+. .+|++|+||||++|||+|+.++++.|++.|++++.+++++++.+ ++.+++. +.|+++|+
T Consensus 95 g~~~-~i-~~~-~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~r~~-~~~~~l~~~g~~~~sl~ 164 (178)
T 2yzk_A 95 GTLS-QV-EGD-PPKGRVVVVDDVATTGTSIAKSIEVLRSNGYTVGTALVLVDRGE-GAGELLARMGVRLVSVA 164 (178)
T ss_dssp CCCC-CC-BTC-CCSSEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCS-SHHHHHHTTTCEEEEEE
T ss_pred Cccc-ee-ccc-CCCCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEcCc-CHHHHHHHcCCcEEEEe
Confidence 1111 01 123 58999999999999999999999999999999999999999875 7788886 46788876
No 13
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}
Probab=99.91 E-value=7.7e-24 Score=165.76 Aligned_cols=135 Identities=18% Similarity=0.407 Sum_probs=113.4
Q ss_pred eEEechhhhcCHHHHHHHHHHHHHHhcC--CCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeec
Q 030139 32 MFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEY 109 (182)
Q Consensus 32 ~~~d~~~l~~~~~~~~~~~~~la~~~~~--~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~ 109 (182)
.|+|+..++.+|..++.+++.|++.+.. .++|+|+|+|.+|+++|..+|..+++|+.+.||..+. +
T Consensus 31 ~y~d~~~l~~~~~~~~~l~~~la~~i~~~~~~~d~Iv~v~~~g~~~a~~la~~l~~p~~~~rk~~k~------------~ 98 (205)
T 2wns_A 31 IYIDLRGIVSRPRLLSQVADILFQTAQNAGISFDTVCGVPYTALPLATVICSTNQIPMLIRRKETKD------------Y 98 (205)
T ss_dssp EEECGGGGGGSHHHHHHHHHHHHHHHHHTTCCCSEEEECTTTTHHHHHHHHHHHTCCEEEECCTTTT------------S
T ss_pred EEEeChHhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEcCCchHHHHHHHHHHHCcCEEEEecCcCc------------c
Confidence 6889999999999999999999998865 5789999999999999999999999999887765431 1
Q ss_pred cceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccC--CCCccccc
Q 030139 110 GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG--EKPLFVLV 181 (182)
Q Consensus 110 ~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~--~~~~~~l~ 181 (182)
+.... + .+...+|++||||||++|||+|+.++++.|+++|++++++++++++. .++.+++. +.|+++|+
T Consensus 99 g~~~~-~-~g~~~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v~~~~l~~~~-~~~~~~l~~~g~~v~sl~ 169 (205)
T 2wns_A 99 GTKRL-V-EGTINPGETCLIIEDVVTSGSSVLETVEVLQKEGLKVTDAIVLLDRE-QGGKDKLQAHGIRLHSVC 169 (205)
T ss_dssp SSCCS-E-ESCCCTTCBEEEEEEEESSSHHHHHHHHHHHHTTCBCCEEEEEEECC-SSHHHHHHTTTCEEEEEE
T ss_pred Ccccc-c-cCCCCCCCEEEEEEEeccccHHHHHHHHHHHHCCCEEEEEEEEEEcC-cchHHHHHHcCCeEEEEE
Confidence 11110 1 14446899999999999999999999999999999999999999995 57778875 46788875
No 14
>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis}
Probab=99.90 E-value=2.6e-23 Score=165.45 Aligned_cols=144 Identities=16% Similarity=0.264 Sum_probs=112.9
Q ss_pred cccCCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcC--CCccEEEeeCCCChhhHHHHHHHh------CCCeEeee
Q 030139 20 IRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAI------GAKFVPMR 91 (182)
Q Consensus 20 ~r~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~--~~~d~Iv~v~~~G~~~a~~la~~l------~vp~~~~r 91 (182)
+.+-++..+| .|+|.. ++.+|..++.+++.+++.+.+ .++|+|+|++.+|+++|..+|..| ++|+.+.|
T Consensus 41 F~L~SG~~Sp--~y~d~~-~~~~p~~~~~l~~~la~~i~~~~~~~D~Ivg~~~gGi~~A~~lA~~L~~~~g~~~p~~~~R 117 (232)
T 3mjd_A 41 FTLKSGRISP--YFFNAG-LFNTGAQLATLADYYAQLIIKSDVKYDILFGPAYKGIPLVAAISTVLALKYNIDMPYAFDR 117 (232)
T ss_dssp EECTTSCEEE--EEECGG-GCCBHHHHHHHHHHHHHHHHHCCCCCSEEEECTTTHHHHHHHHHHHHHHHHCCCCBEEEEC
T ss_pred EEecCCCccc--eEeccc-ccCCHHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcHHHHHHHHHHHhhhcCCCCcEEEEE
Confidence 3444454444 678874 678999999999999999875 479999999999999999999997 89999998
Q ss_pred ccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccc--
Q 030139 92 KPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGR-- 169 (182)
Q Consensus 92 k~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~-- 169 (182)
|..+.. +.... + .+...+|++||||||++|||+|+.+++++|+++|++++++++++++.+ +|+
T Consensus 118 K~~k~~------------g~~~~-i-~g~~~~Gk~VLIVDDVitTG~Tl~~a~~~L~~~Ga~vv~v~vlvdr~e-~g~~~ 182 (232)
T 3mjd_A 118 KEAKDH------------GEGGV-F-VGADMTNKKVLLIDDVMTAGTAFYESYNKLKIINAKIAGVVLSIDRQE-KAKDS 182 (232)
T ss_dssp CC-------------------CC-E-EESCCTTCEEEEECSCCSSSHHHHHHHHHHHTTTCEEEEEEEEEECCB-CCTTS
T ss_pred eecccC------------CCCce-E-eccCCCCCEEEEEEeeccccHHHHHHHHHHHHCCCEEEEEEEEEECCc-CCccc
Confidence 865421 11110 1 133468999999999999999999999999999999999999999975 454
Q ss_pred ------cccC--CCCccccc
Q 030139 170 ------ERLG--EKPLFVLV 181 (182)
Q Consensus 170 ------~~l~--~~~~~~l~ 181 (182)
+.+. ++|++||+
T Consensus 183 ~~~a~~~~~~~~gv~v~sL~ 202 (232)
T 3mjd_A 183 DISATKKISQDFNIPVLAVT 202 (232)
T ss_dssp SSCHHHHHHHHHCCCEEEEE
T ss_pred cchhHHHHHHHcCCcEEEEE
Confidence 3332 57888886
No 15
>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A
Probab=99.90 E-value=3e-23 Score=163.33 Aligned_cols=133 Identities=18% Similarity=0.337 Sum_probs=111.1
Q ss_pred eEEechhhhcCHHHHHHHHHHHHHHhcC--CCccEEEeeCCCChhhHHHHHHHh------CCCeEeeeccCCCCCceeee
Q 030139 32 MFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAI------GAKFVPMRKPKKLPGEVISE 103 (182)
Q Consensus 32 ~~~d~~~l~~~~~~~~~~~~~la~~~~~--~~~d~Iv~v~~~G~~~a~~la~~l------~vp~~~~rk~~~~~~~~~~~ 103 (182)
.|+| ..++.+++.++.+++.|++.+.+ .++|+|+|++.+|+++|..+|..+ ++|+.+.||..+..+.
T Consensus 33 ~y~d-~~ll~~~~~~~~~~~~la~~i~~~~~~~d~Ivgv~~~G~~~a~~lA~~L~~~~~~~~~~~~~rk~~~~~~~---- 107 (213)
T 1lh0_A 33 YFFN-AGLFNTGRDLALLGRFYAEALVDSGIEFDLLFGPAYKGIPIATTTAVALAEHHDKDLPYCFNRKEAKDHGE---- 107 (213)
T ss_dssp EEEC-GGGCCBHHHHHHHHHHHHHHHHHHCCCCSEEECCTTTHHHHHHHHHHHHHHHHCCCCBEEEECSSCCSSTT----
T ss_pred EEEe-cCccCCHHHHHHHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHHHHHhhCCCCCEEEEEeccCccCC----
Confidence 6778 57889999999999999998865 368999999999999999999999 8999988876542211
Q ss_pred eeeeeccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCccccccc---------CC
Q 030139 104 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL---------GE 174 (182)
Q Consensus 104 ~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l---------~~ 174 (182)
...+. +...+| +||||||++|||+|+.++++.|+++|++++++++++++.+ +|++++ .+
T Consensus 108 -------~~~~~---g~~~~g-~VliVDDvitTG~Tl~~a~~~l~~~Ga~~v~v~~l~dr~~-~g~~~l~~~~~~~~~~g 175 (213)
T 1lh0_A 108 -------GGSLV---GSALQG-RVMLVDDVITAGTAIRESMEIIQAHGATLAGVLISLDRQE-RGRGEISAIQEVERDYG 175 (213)
T ss_dssp -------CSSEE---ESCCCS-EEEEECSCCSSSCHHHHHHHHHHHTTCEEEEEEEEEECCB-BCSSSSBHHHHHHHHHC
T ss_pred -------CCcee---CCCCCC-CEEEEEecccchHHHHHHHHHHHHCCCeEEEEEEEEEccc-CcccchhhHHHHHHHcC
Confidence 01111 234689 9999999999999999999999999999999999999987 777776 46
Q ss_pred CCccccc
Q 030139 175 KPLFVLV 181 (182)
Q Consensus 175 ~~~~~l~ 181 (182)
+|++||+
T Consensus 176 ~~v~sl~ 182 (213)
T 1lh0_A 176 CKVISII 182 (213)
T ss_dssp CEEEEEE
T ss_pred CCeEEEE
Confidence 8888886
No 16
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=99.90 E-value=6e-23 Score=177.51 Aligned_cols=142 Identities=23% Similarity=0.389 Sum_probs=118.2
Q ss_pred CCC-CCCc---eEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCce
Q 030139 25 DFP-KPGI---MFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEV 100 (182)
Q Consensus 25 ~~~-~~~~---~~~d~~~l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~ 100 (182)
.|. .+|. .|+|+..++.+|+.++.+++.|++.+.+.++|+|+|++.+|+++|..+|..+++|+.+.||..+.
T Consensus 276 ~F~L~SG~~S~~y~D~~~l~~~p~~~~~l~~~la~~~~~~~~D~Ivg~~~gGi~~A~~lA~~L~~p~~~~rk~~k~---- 351 (453)
T 3qw4_B 276 NFTLKSGKSSPIYIDLRRLVTYPAIMRLVAREYAKVLRHYKFDRIAGLPYAALPIASAISNEMNVPLIYPRREAKI---- 351 (453)
T ss_dssp CCBCTTSSBCSEEECCGGGGGCHHHHHHHHHHHHHHHTTSCCSEEEECTTTTHHHHHHHHHHHCCCEEEESSCC------
T ss_pred CEeccCCCcCCEEEechHhccCHHHHHHHHHHHHHHhccCCCCEEEeccCCcHHHHHHHHHHhCCCEEEEEeeccc----
Confidence 455 4443 68999999999999999999999999877899999999999999999999999999999887541
Q ss_pred eeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccC--CCCcc
Q 030139 101 ISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG--EKPLF 178 (182)
Q Consensus 101 ~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~--~~~~~ 178 (182)
++.... + .+...+|++||||||++|||+|+.++++.|+++|++++++++++++.+ ++++++. ++|++
T Consensus 352 --------~g~~~~-i-~g~~~~G~~VliVDDvitTG~T~~~~~~~l~~~g~~vv~v~~lvdr~~-~g~~~l~~~g~~v~ 420 (453)
T 3qw4_B 352 --------YGTKAA-I-EGEYKKGDRVVIIDDLVSTGETKVEAIEKLRSAGLEVVSIVVLVDRDM-GAKAFLNKLGYDFE 420 (453)
T ss_dssp -------------C-E-ESCCCTTCEEEEEEEEECC-CCHHHHHHHHHTTTCEEEEEEEEEECSS-SHHHHHHHTTCCEE
T ss_pred --------cCcCce-E-ecccCCCCEEEEEeeeechhHHHHHHHHHHHHcCCEEEEEEEEEECCc-chHHHHHhcCCCEE
Confidence 122111 1 134578999999999999999999999999999999999999999974 7888875 57888
Q ss_pred ccc
Q 030139 179 VLV 181 (182)
Q Consensus 179 ~l~ 181 (182)
||+
T Consensus 421 sL~ 423 (453)
T 3qw4_B 421 AVV 423 (453)
T ss_dssp EEE
T ss_pred EEe
Confidence 886
No 17
>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1
Probab=99.89 E-value=5.3e-23 Score=161.56 Aligned_cols=136 Identities=25% Similarity=0.350 Sum_probs=113.4
Q ss_pred eEEechhhhcCHHHHHHHHHHHHHHhcC--CCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeec
Q 030139 32 MFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEY 109 (182)
Q Consensus 32 ~~~d~~~l~~~~~~~~~~~~~la~~~~~--~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~ 109 (182)
.|+|...++.+|..++.+++.|++.+.. .++|+|+|++.||+++|..+|+.+++|+.++||.++..+.
T Consensus 37 ~~~D~~~l~~~~~~~~~~~~~la~~i~~~~~~~d~vv~v~~~g~~~a~~la~~l~~p~~~~rk~~~~~g~---------- 106 (211)
T 2aee_A 37 IYTDNRVTLSYPKTRDLIENGFVETIKAHFPEVEVIAGTATAGIPHGAIIADKMTLPFAYIRSKPKDHGA---------- 106 (211)
T ss_dssp EEECGGGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEETTTTHHHHHHHHHHHTCCEEEECSSCC--------------
T ss_pred eEEeChhhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEeccCcHHHHHHHHHHhCCCEEEEEeecCCcCC----------
Confidence 5789999999999999999999988864 3679999999999999999999999999888876542111
Q ss_pred cceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccC--CCCccccc
Q 030139 110 GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG--EKPLFVLV 181 (182)
Q Consensus 110 ~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~--~~~~~~l~ 181 (182)
...+ . +...+|++||||||++|||+|+.++++.|++.|++++++++++++...++.+++. +.|+++++
T Consensus 107 -~~~i--~-g~~~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l~~~~~~~~~~~l~~~~~~~~~l~ 176 (211)
T 2aee_A 107 -GNQI--E-GRVLKGQKMVIIEDLISTGGSVLDAAAAASREGADVLGVVAIFTYELPKASQNFKEAGIKLITLS 176 (211)
T ss_dssp -CCSE--E-SCCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHHTCCEEESC
T ss_pred -ccee--c-CCCCCcCEEEEEeecccchHHHHHHHHHHHHCCCcEEEEEEEEecccccHHHHHHhCCCCEEEEe
Confidence 0111 1 3457899999999999999999999999999999999999999997667888886 36666664
No 18
>3n2l_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, infectious diseases; 2.10A {Vibrio cholerae}
Probab=99.89 E-value=1.1e-22 Score=162.13 Aligned_cols=142 Identities=19% Similarity=0.314 Sum_probs=110.8
Q ss_pred ccCCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcC--CCccEEEeeCCCChhhHHHHHHHh------CCCeEeeec
Q 030139 21 RVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAI------GAKFVPMRK 92 (182)
Q Consensus 21 r~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~--~~~d~Iv~v~~~G~~~a~~la~~l------~vp~~~~rk 92 (182)
.+-++.++| .|+|. .++.+|..++.+++.+++.+.+ .++|+|+|++.+|+++|..+|..| ++|+.+.||
T Consensus 49 ~L~SG~~Sp--~y~d~-~ll~~p~~l~~l~~~la~~i~~~~~~~D~Vvg~~~gGi~~A~~lA~~L~~~~g~~vp~~~~RK 125 (238)
T 3n2l_A 49 TLKSGRKSP--YFFNA-GLFNTGRDLARLGRFYAAALVDSGIEFDVLFGPAYKGIPIATTTAVALADHHDVDTPYCFNRK 125 (238)
T ss_dssp ECSSSCEEE--EEECG-GGCCBHHHHHHHHHHHHHHHHHHTCCCSEEEECTTTHHHHHHHHHHHHHHHSCCCCBEEEECC
T ss_pred EecCCCccc--EEEEC-CCCCCHHHHHHHHHHHHHHHHhhCCCCCEEEecccChHHHHHHHHHHHhHhhCCCccEEEEee
Confidence 333444444 67886 5789999999999999998874 479999999999999999999997 899999988
Q ss_pred cCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccc-
Q 030139 93 PKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRER- 171 (182)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~- 171 (182)
..+..+. ...+. +...+| +||||||++|||+|+.+++++|+++|++++++++++++.+ +|++.
T Consensus 126 ~~k~~g~-----------~~~i~---G~~~~G-~VliVDDvitTG~T~~~a~~~l~~~Ga~vv~v~vlvdr~e-gG~~~l 189 (238)
T 3n2l_A 126 EAKNHGE-----------GGNLV---GSKLEG-RVMLVDDVITAGTAIRESMELIQANKADLAGVLVAIDRQE-KGKGEL 189 (238)
T ss_dssp C-------------------CEE---ESCCCS-EEEEECSCCSSSHHHHHHHHHHHHTTCEEEEEEEEEECCC-BCSSSS
T ss_pred ccCCCCC-----------CceEe---ccccCC-cEEEEeeeecccHHHHHHHHHHHHcCCEEEEEEEEEEccc-Cccchh
Confidence 7653211 01111 334689 9999999999999999999999999999999999999974 44443
Q ss_pred -----c---CCCCccccc
Q 030139 172 -----L---GEKPLFVLV 181 (182)
Q Consensus 172 -----l---~~~~~~~l~ 181 (182)
+ .++|++||+
T Consensus 190 ~a~~~~~~~~Gv~v~SL~ 207 (238)
T 3n2l_A 190 SAIQEVERDFGCAVISIV 207 (238)
T ss_dssp BHHHHHHHHHCCEEEEEE
T ss_pred hHHHHHHHHcCCCEEEEE
Confidence 2 357888876
No 19
>2ps1_A Orotate phosphoribosyltransferase 1; alpha beta, oprtase-OA-PRPP complex; HET: ORO PRP; 1.75A {Saccharomyces cerevisiae} PDB: 2pry_A* 2prz_A*
Probab=99.89 E-value=1.1e-22 Score=161.49 Aligned_cols=134 Identities=17% Similarity=0.275 Sum_probs=110.2
Q ss_pred eEEechhhhcCHHHHHHHHHHHHHHhcC--CCccEEEeeCCCChhhHHHHHHHh---------CCCeEeeeccCCCCCce
Q 030139 32 MFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAI---------GAKFVPMRKPKKLPGEV 100 (182)
Q Consensus 32 ~~~d~~~l~~~~~~~~~~~~~la~~~~~--~~~d~Iv~v~~~G~~~a~~la~~l---------~vp~~~~rk~~~~~~~~ 100 (182)
.|+| ..++.+++.++.+++.|++.+.+ .++|+|++++.+|+++|..+|+.+ ++|+.+.||.++.
T Consensus 37 ~y~d-~~ll~~~~~~~~l~~~la~~i~~~~~~~d~Vvg~~~~G~~~a~~lA~~L~~~~~~~~~~~p~~~~rk~~k~---- 111 (226)
T 2ps1_A 37 YFFN-LGLFNTGKLLSNLATAYAIAIIQSDLKFDVIFGPAYKGIPLAAIVCVKLAEIGGSKFQNIQYAFNRKEAKD---- 111 (226)
T ss_dssp EEEC-GGGCCBHHHHHHHHHHHHHHHHHHTCCCSEEEECTTTHHHHHHHHHHHHHHHSTTTTTTCEEEEEEEEEES----
T ss_pred EEEe-cCccCCHHHHHHHHHHHHHHHHHhCCCCCEEEEeccCCHHHHHHHHHHHHhhhccccCCCCEEEEechhhh----
Confidence 5778 56889999999999999998865 368999999999999999999999 9999888775431
Q ss_pred eeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCccccc----c-----
Q 030139 101 ISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRE----R----- 171 (182)
Q Consensus 101 ~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~----~----- 171 (182)
++.+.+.. +...+|++||||||++|||+|+.++++.|+++|++++++++++++.+. +++ +
T Consensus 112 --------~g~~~~~~--~~~i~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l~dr~~~-g~~~~~~~~~~~~ 180 (226)
T 2ps1_A 112 --------HGEGGIIV--GSALENKRILIIDDVMTAGTAINEAFEIISNAKGQVVGSIIALDRQEV-VSTDDKEGLSATQ 180 (226)
T ss_dssp --------STTCEEEE--ESCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCBB-SCTTCSSCCBHHH
T ss_pred --------cCCCceEe--cCCCCcCEEEEEEecccChHHHHHHHHHHHHcCCeEEEEEEEEEccCc-ccccccccchHHH
Confidence 12222222 234689999999999999999999999999999999999999999863 443 1
Q ss_pred ----cCCCCccccc
Q 030139 172 ----LGEKPLFVLV 181 (182)
Q Consensus 172 ----l~~~~~~~l~ 181 (182)
..+.|++||+
T Consensus 181 ~~~~~~g~~v~sl~ 194 (226)
T 2ps1_A 181 TVSKKYGIPVLSIV 194 (226)
T ss_dssp HHHHHHTCCEEEEE
T ss_pred HHHHhcCCeEEEEe
Confidence 3468898886
No 20
>3hvu_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, 2-(N-morphol ethanesulfonic acid (MES), IDP01892; HET: MES; 1.95A {Bacillus anthracis str} PDB: 3h83_A* 3kb8_A*
Probab=99.83 E-value=4.8e-20 Score=144.05 Aligned_cols=135 Identities=16% Similarity=0.200 Sum_probs=104.7
Q ss_pred cCCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCCChhhHHHHHHHhCCCe--EeeeccCCC
Q 030139 22 VIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKF--VPMRKPKKL 96 (182)
Q Consensus 22 ~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l~vp~--~~~rk~~~~ 96 (182)
.-|.||+++++..|+..++.+++.++..++.|++++.+ .+.++|||+++||+++|..+|+.+++|+ .++++++..
T Consensus 16 ~~~~f~~~~~~~~di~~~l~s~~~i~~~i~~LA~~I~~~~~~~~~vVVgi~~GG~~~a~~La~~L~~p~~~~~i~~~~Y~ 95 (204)
T 3hvu_A 16 ENLYFQSNAMMNQDIEKVLISEEQIQEKVLELGAIIAEDYKNTVPLAIGVLKGAMPFMADLLKRTDTYLEMDFMAVSSYG 95 (204)
T ss_dssp ---CCCCCCCGGGGEEEEEECHHHHHHHHHHHHHHHHHHTSSSCCEEEEETTTTHHHHHHHHHTCCSCCEEEEEEEEECS
T ss_pred CCCCCCCchhhhhcCCcEeCCHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcchHHHHHHHHHHhCCCcceEEEEEEEec
Confidence 35789999997778888999999999999999987753 2589999999999999999999999985 344433211
Q ss_pred CCceeeeeeeeeccceeEEEEc--cccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 030139 97 PGEVISEEYSLEYGKDVMEMHV--GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 165 (182)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~l~~--~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~ 165 (182)
.+ +...+.+.+.. ....+|++||||||+++||+|+.++++.|++.|++.+.++++++++.
T Consensus 96 ~~---------~~~~~~v~i~~~l~~~~~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~ 157 (204)
T 3hvu_A 96 HS---------TVSTGEVKILKDLDTSVEGRDILIVEDIIDSGLTLSYLVDLFKYRKAKSVKIVTLLDKPT 157 (204)
T ss_dssp GG---------GTTSCCEEEEECCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECGG
T ss_pred CC---------CccCCcEEEEcCCCccCCCCEEEEEeceeCchHHHHHHHHHHHHcCCCEEEEEEEEECCC
Confidence 00 00111222221 23478999999999999999999999999999999999999999863
No 21
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=99.81 E-value=1.7e-19 Score=134.40 Aligned_cols=120 Identities=20% Similarity=0.262 Sum_probs=91.9
Q ss_pred hhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeE-eeeccCCCCCceeeeeeeeeccceeEEEE
Q 030139 39 LLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFV-PMRKPKKLPGEVISEEYSLEYGKDVMEMH 117 (182)
Q Consensus 39 l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~-~~rk~~~~~~~~~~~~~~~~~~~~~~~l~ 117 (182)
++.+++.++.+++.|++.+.+.++|+|+|+++||+++|..+|+.+++|+. .+++.+....+. ......+...
T Consensus 4 ~~~s~~~~~~~~~~la~~i~~~~~d~iv~v~~gg~~~a~~la~~l~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 76 (153)
T 1vdm_A 4 VYLTWWQVDRAIFALAEKLREYKPDVIIGVARGGLIPAVRLSHILGDIPLKVIDVKFYKGIDE-------RGEKPVITIP 76 (153)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHCCSEEEEETTTTHHHHHHHHHHTTSCCEEEEEEECCCC--C-------CCSSCEEEEC
T ss_pred eECCHHHHHHHHHHHHHHHHccCCCEEEEECCcCHHHHHHHHHHhCCCceEEEEEEEecCCcc-------cccceeEecc
Confidence 45678888899999998886557899999999999999999999999965 333222111000 0001123322
Q ss_pred ccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 030139 118 VGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 165 (182)
Q Consensus 118 ~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~ 165 (182)
.....+|++||||||++|||+|+.++++.|+++|++.+.+++++.+..
T Consensus 77 ~~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~ga~~v~~~~l~~~~~ 124 (153)
T 1vdm_A 77 IHGDLKDKRVVIVDDVSDTGKTLEVVIEEVKKLGAKEIKIACLAMKPW 124 (153)
T ss_dssp CCSCCBTCEEEEEEEEESSCHHHHHHHHHHHTTTBSEEEEEEEEECTT
T ss_pred CCcCCCCCEEEEEecccCChHHHHHHHHHHHHcCCCEEEEEEEEeCCC
Confidence 234578999999999999999999999999999999999999999864
No 22
>1fsg_A HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: PRP 9DG; 1.05A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1qk3_A* 1qk4_A* 1qk5_A* 1dbr_A
Probab=99.79 E-value=3.7e-19 Score=141.71 Aligned_cols=143 Identities=17% Similarity=0.140 Sum_probs=104.9
Q ss_pred CCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCCChhhHHHHHHHhCCCeEeeec-cCCCCC
Q 030139 23 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFVPMRK-PKKLPG 98 (182)
Q Consensus 23 ~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk-~~~~~~ 98 (182)
...|+.|+..+.|+..++.+++.++..++.|++++.+ .++++|+|+++||+++|..+|+.|+.++...+. ..+.+-
T Consensus 32 ~~~F~~~~~~~~di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~vVvgi~~gG~~~a~~la~~L~~~~~~~~~k~~~~P~ 111 (233)
T 1fsg_A 32 ADDFLVPPHCKPYIDKILLPGGLVKDRVEKLAYDIHRTYFGEELHIICILKGSRGFFNLLIDYLATIQKYSGRESSVPPF 111 (233)
T ss_dssp GGGSCCCTTTTTTCCEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEEETTTHHHHHHHHHHHHHHHHHCSSCCSSCSC
T ss_pred cccCccCCcchhhCcEEeeCHHHHHHHHHHHHHHHHHHcCCCCCEEEEEccCCHHHHHHHHHHhCCcccccccccCCCCc
Confidence 4468888876678888999999999999999988753 478999999999999999999999874322221 111111
Q ss_pred --ceee-eeeeeeccceeEEEEcc--ccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 030139 99 --EVIS-EEYSLEYGKDVMEMHVG--AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 165 (182)
Q Consensus 99 --~~~~-~~~~~~~~~~~~~l~~~--~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~ 165 (182)
.+.. ..|..+...+...+..+ ...+||+||||||+++||+|+.++++.|++.|++.+.+++++++++
T Consensus 112 ~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~Gk~VLIVDDii~TG~Tl~~a~~~L~~~ga~~V~vavl~~k~~ 183 (233)
T 1fsg_A 112 FEHYVRLKSYQNDNSTGQLTVLSDDLSIFRDKHVLIVEDIVDTGFTLTEFGERLKAVGPKSMRIATLVEKRT 183 (233)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSCGGGGTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred EEEEEEEEeccCccccccEEEecCCccccCCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCc
Confidence 0111 12221111122333221 3478999999999999999999999999999999999999999764
No 23
>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1
Probab=99.78 E-value=8.9e-19 Score=134.45 Aligned_cols=125 Identities=13% Similarity=0.209 Sum_probs=94.8
Q ss_pred EEechhhhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCCChhhHHHHHHHhCCCeEe--eeccCCCCCceeeeeeee
Q 030139 33 FQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFVP--MRKPKKLPGEVISEEYSL 107 (182)
Q Consensus 33 ~~d~~~l~~~~~~~~~~~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~--~rk~~~~~~~~~~~~~~~ 107 (182)
+.|+..++.+++.++..+..|++++.+ .++++|+|+++||+++|..+|+.+++|+.. ++..+. ... .
T Consensus 7 ~~di~~~l~~~~~i~~~~~~la~~i~~~~~~~~~vvv~i~~gg~~~a~~la~~l~~p~~~~~~~~~~y-~~~-----~-- 78 (183)
T 1hgx_A 7 MDDLERVLYNQDDIQKRIRELAAELTEFYEDKNPVMICVLTGAVFFYTDLLKHLDFQLEPDYIICSSY-SGT-----K-- 78 (183)
T ss_dssp CTTEEEEEECHHHHHHHHHHHHHHHHHHHTTTCCEEEEETTTTHHHHHHHHTTCCSCCEEEEEEEEC-------------
T ss_pred CcCcceEEcCHHHHHHHHHHHHHHHHHHcCCCCcEEEEeCcChHHHHHHHHHHcCCCcceeEEEEEec-CCc-----c--
Confidence 457778899999999999999988863 368999999999999999999999999754 211111 000 0
Q ss_pred eccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 030139 108 EYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 165 (182)
Q Consensus 108 ~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~ 165 (182)
..+...+........+|++||||||+++||+|+.++++.|++.|++.+.+++++++..
T Consensus 79 ~~~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~v~~~~l~~~~~ 136 (183)
T 1hgx_A 79 STGNLTISKDLKTNIEGRHVLVVEDIIDTGLTMYQLLNNLQMRKPASLKVCTLCDKDI 136 (183)
T ss_dssp ----CEEEECCSSCCTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred cccceEEeecCCCCCCCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEEEEEecCc
Confidence 0011111111123478999999999999999999999999999999999999998753
No 24
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=99.77 E-value=2.6e-18 Score=140.49 Aligned_cols=115 Identities=23% Similarity=0.316 Sum_probs=94.3
Q ss_pred HHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEE-ccccCCCCeEEE
Q 030139 51 DLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMH-VGAVQAGERALI 129 (182)
Q Consensus 51 ~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~gk~Vll 129 (182)
..|++++.+.+.++|++++.||+++|..+|+.+|+|+.+++|+++.++ ...+. .....+|++|+|
T Consensus 143 ~~la~~i~~~~~~vVV~pd~Gg~~~A~~lA~~L~~p~~~i~K~r~~~g--------------~v~i~~~~~dv~gk~vli 208 (286)
T 3lrt_A 143 DAIVRYYKNVDVDYVVSPDDGGLARVADISAKLGKKHFFIEKKRIDDR--------------TVEMKVPNVDVNGKKLLI 208 (286)
T ss_dssp HHHHHHHTTSCCSEEEESSSSSHHHHHHHHHHHTCEEEEEEEEEETTE--------------EEEEEESCCCCTTCEEEE
T ss_pred HHHHHHHHhcCCCEEEEECCCccHHHHHHHHHhCCCeEEEeeeecCCC--------------cEEEeeccccCCcCEEEE
Confidence 445555655678999999999999999999999999998887653221 11111 123478999999
Q ss_pred EecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccCCCCcccc
Q 030139 130 VDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL 180 (182)
Q Consensus 130 VDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~~~~~~l 180 (182)
|||+++||+|+.++++.|++.|++.+.++++|+.++.++.++| +.++..+
T Consensus 209 VDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~th~v~s~~a~~~l-~s~i~~v 258 (286)
T 3lrt_A 209 VDDIISTGGTIAKSSGLLREKGASKIYVSAVHGLFVNGSENKI-LQNADEI 258 (286)
T ss_dssp EEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECCCTTHHHHH-TTTCSEE
T ss_pred EeccccccHHHHHHHHHHHhCCCCEEEEEEEEeecCchHHHHH-HcCCCEE
Confidence 9999999999999999999999999999999999988999999 7776544
No 25
>1z7g_A HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; flexibility, trans CIS peptide bond isomerization, nucleotide binding; 1.90A {Homo sapiens} SCOP: c.61.1.1 PDB: 1hmp_A* 1bzy_A 3gep_A* 3ggc_A* 3ggj_A* 1d6n_A* 2vfa_A*
Probab=99.77 E-value=1e-18 Score=137.71 Aligned_cols=133 Identities=15% Similarity=0.186 Sum_probs=101.1
Q ss_pred CCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCCChhhHHHHHHHhC---------CCe--E
Q 030139 23 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIG---------AKF--V 88 (182)
Q Consensus 23 ~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l~---------vp~--~ 88 (182)
.++|+.|+.++.|+..++.+++.++...+.|++++.. .+.++|+|+++||+++|..+|+.|+ +|+ .
T Consensus 18 ~~~f~~~~~~~~di~~il~~~~~~~~~~~~La~~i~~~~~~~~~vVvgi~~GG~~~a~~la~~L~~~~~i~~g~~~~~~~ 97 (217)
T 1z7g_A 18 LDLFCIPNHYAEDLERVFIPHGLIMDRTERLARDVMKEMGGHHIVALCVLKGGYKFFADLLDYIKALNRNSDRSIPMTVD 97 (217)
T ss_dssp GGGSCCCGGGTTTEEEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEECSSCCHHHHHHHHHHHHHHTTCSSCCCEEEE
T ss_pred ccccccCcccccccceEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEECCCCHHHHHHHHHHhCCccccCCCceEeeee
Confidence 4467788877778888999999999999999988763 4689999999999999999999998 564 2
Q ss_pred eeeccCCCCCceeeeeeeeeccceeEEEEc---cccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 030139 89 PMRKPKKLPGEVISEEYSLEYGKDVMEMHV---GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 165 (182)
Q Consensus 89 ~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~ 165 (182)
+++..+. ..+...+.+.+.. ....+|++||||||+++||+||.++++.|++.|++.+.+++++++.+
T Consensus 98 ~i~~~~y----------~~~~~~~~~~~~~~~~~~~~~gk~VliVDDii~TG~Tl~~~~~~L~~~g~~~v~~~~l~~k~~ 167 (217)
T 1z7g_A 98 FIRLKSY----------CNDQSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKRT 167 (217)
T ss_dssp EECBC--------------------CCBCCSSCGGGGTTSEEEEEEEECCCHHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred eEEEEEe----------cccccccceEEecCCCccccCCCEEEEEeceeCcHHHHHHHHHHHHhcCCCEEEEEEEEECcc
Confidence 3332111 0000011111111 12478999999999999999999999999999999999999999764
No 26
>3ozf_A Hypoxanthine-guanine-xanthine phosphoribosyltrans; transferase-transferase inhibitor complex; HET: HPA; 1.94A {Plasmodium falciparum fcr-3} PDB: 3ozg_A* 1cjb_A*
Probab=99.76 E-value=1.1e-18 Score=139.91 Aligned_cols=140 Identities=16% Similarity=0.192 Sum_probs=103.2
Q ss_pred CCCCCceEEechhhhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCCChhhHHHHHHHhCCCeEe-eeccCCCCCce-
Q 030139 26 FPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFVP-MRKPKKLPGEV- 100 (182)
Q Consensus 26 ~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~-~rk~~~~~~~~- 100 (182)
|..|.-++.|+..++.+++.++...+.|++++.+ .+.++|+|+++||+.+|..+++.++.+++. .||..+.+-+.
T Consensus 49 f~~p~~~~~di~~vli~~~~I~~~i~~LA~~I~~~~~~~~~vVVgIl~gG~~fa~~La~~L~~~~v~~~rk~gklP~~v~ 128 (250)
T 3ozf_A 49 FMIPAHYKKYLTKVLVPNGVIKNRIEKLAYDIKKVYNNEEFHILCLLKGSRGFFTALLKHLSRIHNYSAVETSKPLFGEH 128 (250)
T ss_dssp SCCCGGGGGGEEEEEECHHHHHHHHHHHHHHHHHHHTTCCEEEEEEETTTHHHHHHHHHHHHHHHHHHCCTTCCCCEEEE
T ss_pred ccCchhhhccCeEEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcchHHHHHHHHHHhccccccccccccCCCceEE
Confidence 3334434457777899999999999999987753 357899999999999999999999844332 23333333221
Q ss_pred -e-eeeeeeeccceeEEEEcc--ccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 030139 101 -I-SEEYSLEYGKDVMEMHVG--AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 165 (182)
Q Consensus 101 -~-~~~~~~~~~~~~~~l~~~--~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~ 165 (182)
. ...|..+++.+.+.+..+ ...+|++||||||+++||+|+.++++.|++.|++.+.++++++++.
T Consensus 129 fI~~ssY~~~~s~g~v~i~~~~~~~~~gk~VlIVDDii~TG~Tl~~~~~~L~~~g~~~v~va~l~~k~~ 197 (250)
T 3ozf_A 129 YVRVKSYCNDQSTGTLEIVSEDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLFIKRT 197 (250)
T ss_dssp EEEEEEEETTEEEEEEEEECCCGGGGTTCEEEEEEEEESSSHHHHHHHHHHGGGCCSEEEEEEEEEECC
T ss_pred EEEEEEecCCcccCcEEEEcCCccccCCCEEEEEeceeCchHHHHHHHHHHHhcCCCEEEEEEEEECCc
Confidence 1 123433333334455433 2368999999999999999999999999999999999999999874
No 27
>2jbh_A Phosphoribosyltransferase domain-containing prote; glycosyltransferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens}
Probab=99.76 E-value=2.9e-18 Score=135.85 Aligned_cols=130 Identities=18% Similarity=0.266 Sum_probs=97.6
Q ss_pred CCCCCceEEechhhhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCCChhhHHHHHHHhC---------CCe--Eeee
Q 030139 26 FPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIG---------AKF--VPMR 91 (182)
Q Consensus 26 ~~~~~~~~~d~~~l~~~~~~~~~~~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l~---------vp~--~~~r 91 (182)
|+.|+..+.|+..++.+++.+...+..|++++.+ .+.++|+|++.||+++|..+|+.|+ +|+ .+++
T Consensus 29 F~~~~~~~~di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~vvv~i~~gG~~~a~~la~~L~~~~~~~~~~~p~~~~~i~ 108 (225)
T 2jbh_A 29 FTYPQHYYGDLEYVLIPHGIIVDRIERLAKDIMKDIGYSDIMVLCVLKGGYKFXADLVEHLKNISRNSDRFVSMKVDFIR 108 (225)
T ss_dssp SCCCGGGTTSEEEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEEETTTHHHHHHHHHHHHHHHHHSSCCCCEEEEEEE
T ss_pred CccCccccccCceEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEEcCCCEehhHHHHHHhhhhccccccCCCceEEEEE
Confidence 4566655567788899999999999999987763 4689999999999999999999998 664 3333
Q ss_pred ccCCCCCceeeeeeeeeccceeEEEEc--c-ccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 030139 92 KPKKLPGEVISEEYSLEYGKDVMEMHV--G-AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 165 (182)
Q Consensus 92 k~~~~~~~~~~~~~~~~~~~~~~~l~~--~-~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~ 165 (182)
..+. ..+...+.+.+.. . ...+||+||||||+++||+||.++++.|++.|++.+.++++++++.
T Consensus 109 ~~~y----------~~~~~~~~~~~~~~~~~~~v~Gk~VllVDDii~TG~Tl~~a~~~L~~~ga~~V~va~l~~k~~ 175 (225)
T 2jbh_A 109 LKSY----------RNDQSMGEMQIIGGDDLSTLAGKNVLIVEDVVGTGRTMKALLSNIEKYKPNMIKVASLLVKRT 175 (225)
T ss_dssp EC--------------------CCEESSSCGGGGTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred EEec----------cCccccccEEEecCCCccccCCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCc
Confidence 2211 0000111111221 1 3478999999999999999999999999999999999999998764
No 28
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}
Probab=99.75 E-value=4e-18 Score=131.13 Aligned_cols=123 Identities=16% Similarity=0.177 Sum_probs=91.8
Q ss_pred chhhhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCCChhhHHHHHHHhCCCe--EeeeccCCCCCceeeeeeeeecc
Q 030139 36 ITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKF--VPMRKPKKLPGEVISEEYSLEYG 110 (182)
Q Consensus 36 ~~~l~~~~~~~~~~~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l~vp~--~~~rk~~~~~~~~~~~~~~~~~~ 110 (182)
+..++.+++.++..+..|++++.. .++++|+|++.||+++|..+|+.+++|+ ..+++.+...+. . ..+
T Consensus 12 ~~~~l~~~~~i~~~~~~La~~i~~~~~~~~~vvv~i~~gG~~~a~~la~~l~~p~~~~~i~~~~y~~~~-~------~~~ 84 (185)
T 2geb_A 12 IEEILITEEQLKAKVKELGEMITRDYEGKDLVLIGVLKGAIMFMSGLSRAIDLPLSIDFLAVSSYGSST-K------SSG 84 (185)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTTHHHHHHHHHTCCSCCEEEEEEEEECSTTH-H------HHC
T ss_pred cceEEeCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcCcHHHHHHHHHHcCCCceeEEEEEEecCCCC-c------cCc
Confidence 445778888899888889887753 2689999999999999999999999986 334322111100 0 001
Q ss_pred ceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 030139 111 KDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 165 (182)
Q Consensus 111 ~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~ 165 (182)
...+........+|++||||||+++||+|+.++++.|++.|++.+.+++++++++
T Consensus 85 ~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~ 139 (185)
T 2geb_A 85 IVKIIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPE 139 (185)
T ss_dssp CEEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred cEEEeccCCCCCCCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEEEEEECCC
Confidence 1111111123478999999999999999999999999999999999999998863
No 29
>3o7m_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, salvage of nucleosides and nucleotides; HET: GOL; 1.98A {Bacillus anthracis} SCOP: c.61.1.0
Probab=99.75 E-value=8.1e-18 Score=129.71 Aligned_cols=123 Identities=12% Similarity=0.188 Sum_probs=94.4
Q ss_pred EechhhhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCCChhhHHHHHHHhCCCeEe--eeccCCCCCceeeeeeeee
Q 030139 34 QDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFVP--MRKPKKLPGEVISEEYSLE 108 (182)
Q Consensus 34 ~d~~~l~~~~~~~~~~~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~--~rk~~~~~~~~~~~~~~~~ 108 (182)
.|+..++.+++.++...+.|++++.+ .+.++|+|++.||+++|..+|+.+++|+.. ++..+...+ .
T Consensus 6 ~di~~~l~~~~~i~~~i~~La~~I~~~~~~~~~vvVgi~~gG~~~a~~la~~L~~p~~i~~i~~~~Y~~~---------~ 76 (186)
T 3o7m_A 6 IEIKDTLISEEQLQEKVKELALQIERDFEGEEIVVIAVLKGSFVFAADLIRHIKNDVTIDFISASSYGNQ---------T 76 (186)
T ss_dssp CEEEEEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTTHHHHHHHHTTCCSCEEEEEEEEEECC------------
T ss_pred ccccEEecCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcchHHHHHHHHHHhCCCCceEEEEEEEecCC---------C
Confidence 36777889999999999999987753 268999999999999999999999998633 433221100 0
Q ss_pred ccceeEEEEc--cccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 030139 109 YGKDVMEMHV--GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 165 (182)
Q Consensus 109 ~~~~~~~l~~--~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~ 165 (182)
...+.+.+.. ....+|++||||||+++||+|+.++++.|++.|++.+.++++++++.
T Consensus 77 ~~~~~v~i~~~~~~~~~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~ 135 (186)
T 3o7m_A 77 ETTGKVKLLKDIDVNITGKNVIVVEDIIDSGLTLHFLKDHFFMHKPKALKFCTLLDKPE 135 (186)
T ss_dssp ----CEEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred cccCcEEEEecCCCCCCcCEEEEEcCeeCCcHHHHHHHHHHHhcCCcEEEEEEEEECCC
Confidence 0111222222 23478999999999999999999999999999999999999999863
No 30
>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1
Probab=99.75 E-value=4.1e-18 Score=133.77 Aligned_cols=124 Identities=15% Similarity=0.200 Sum_probs=92.0
Q ss_pred EEechhhhcCHHHHHHHHHHHHHHhcC---------CCccEEEeeCCCChhhHHHHHHHh---CCCe--EeeeccCCCCC
Q 030139 33 FQDITTLLLDTKAFRDTIDLFVERYKD---------KNISVVAGIEARGFIFGPPIALAI---GAKF--VPMRKPKKLPG 98 (182)
Q Consensus 33 ~~d~~~l~~~~~~~~~~~~~la~~~~~---------~~~d~Iv~v~~~G~~~a~~la~~l---~vp~--~~~rk~~~~~~ 98 (182)
|.|+..++.+++.+...+..|++++.+ .+.++|+|++.||+++|..+|+.+ ++|+ ..+++.+...+
T Consensus 20 ~~di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~~~~~~~vvvgi~~gG~~~a~~la~~L~~~~~p~~~~~i~~~~y~~~ 99 (211)
T 1pzm_A 20 YPMSARTLVTQEQVWAATAKCAKKIAADYKDFHLTADNPLYLLCVLKGSFIFTADLARFLADEGVPVKVEFICASSYGSG 99 (211)
T ss_dssp CTTEEEEEECHHHHHHHHHHHHHHHHHHHGGGTCBTTBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEEEEEBCC-----
T ss_pred ccccceEEeCHHHHHHHHHHHHHHHHHhcccccccCCCCCEEEEEccchHHHHHHHHHHHhhcCCCceeeeEEeeeccCc
Confidence 346677888999998888888876642 457899999999999999999999 9994 34443221100
Q ss_pred ceeeeeeeeeccceeEEEEc--cccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 030139 99 EVISEEYSLEYGKDVMEMHV--GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 165 (182)
Q Consensus 99 ~~~~~~~~~~~~~~~~~l~~--~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~ 165 (182)
. .. .+ .+.+.. ....+|++||||||+++||+|+.++++.|++.|++.+.+++++++++
T Consensus 100 -~---~~---~~--~~~~~~~~~~~v~gk~VllVDDvi~TG~Tl~aa~~~L~~~Ga~~V~v~~l~~k~~ 159 (211)
T 1pzm_A 100 -V---ET---SG--QVRMLLDVRDSVENRHIMLVEDIVDSAITLQYLMRFMLAKKPASLKTVVLLDKPS 159 (211)
T ss_dssp -----------------CCBCCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred -c---cc---CC--ceEEeccCCCCCCCCEEEEECCccccHHHHHHHHHHHHhcCCCEEEEEEEEecCc
Confidence 0 00 00 111111 13368999999999999999999999999999999999999999864
No 31
>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A*
Probab=99.74 E-value=2.2e-17 Score=130.42 Aligned_cols=124 Identities=18% Similarity=0.192 Sum_probs=90.6
Q ss_pred echhhhcCHHHHHHHHHHHHHHhcC---CCc-------cEEEeeCCCChhhHHHHHHHh---CCCe--EeeeccCCCCCc
Q 030139 35 DITTLLLDTKAFRDTIDLFVERYKD---KNI-------SVVAGIEARGFIFGPPIALAI---GAKF--VPMRKPKKLPGE 99 (182)
Q Consensus 35 d~~~l~~~~~~~~~~~~~la~~~~~---~~~-------d~Iv~v~~~G~~~a~~la~~l---~vp~--~~~rk~~~~~~~ 99 (182)
|+..++.+++.++..++.|++.+.. .+. ++|+|++.||+++|..+|+.+ ++|+ ..++..+...+.
T Consensus 6 di~~~li~~~~i~~~~~~La~~I~~~~~~~~~~~~~p~~vVv~v~~gG~~~a~~La~~L~~~~~p~~~~~l~~~~y~~~~ 85 (220)
T 1tc1_A 6 FAEKILFTEEEIRTRIKEVAKRIADDYKGKGLRPYVNPLVLISVLKGSFMFTADLCRALCDFNVPVRMEFICVSSYGEGL 85 (220)
T ss_dssp TSCCEEECHHHHHHHHHHHHHHHHHHHTTSCCBTTTBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEEEEEEEECC----
T ss_pred ccccEeeCHHHHHHHHHHHHHHHHHHccCcccccCCCCeEEEEeccCCHHHHHHHHHHHHhcCCCccccEEEEeecCCCc
Confidence 4566788898888888888877652 123 899999999999999999999 9995 334322211000
Q ss_pred eeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 030139 100 VISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 165 (182)
Q Consensus 100 ~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~ 165 (182)
. ..+.-.+........+|++||||||+++||+||.++++.|++.|++.|.+++++.+++
T Consensus 86 ------~-~~~~v~~~~~~~~~v~Gk~VLLVDDii~TG~Tl~~a~~~L~~~Ga~~V~v~~l~~k~~ 144 (220)
T 1tc1_A 86 ------T-SSGQVRMLLDTRHSIEGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKRE 144 (220)
T ss_dssp ------------CEEEECCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECTT
T ss_pred ------c-cCCcEEEecCCCccCCCCEEEEEeCccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCc
Confidence 0 0011111111123478999999999999999999999999999999999999998864
No 32
>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A*
Probab=99.73 E-value=1.7e-17 Score=129.52 Aligned_cols=122 Identities=16% Similarity=0.169 Sum_probs=90.7
Q ss_pred hhhhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCCChhhHHHHHHHhCCCe--EeeeccCCCCCceeeeeeeeeccc
Q 030139 37 TTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKF--VPMRKPKKLPGEVISEEYSLEYGK 111 (182)
Q Consensus 37 ~~l~~~~~~~~~~~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l~vp~--~~~rk~~~~~~~~~~~~~~~~~~~ 111 (182)
..++.+++.+...+..|++.+.+ .++|+|+|++.||+++|..+|+.+++|+ ..+++.+...+ .. ..+.
T Consensus 33 ~~~l~~~~~i~~~~~~La~~i~~~~~~~~~viv~v~~gG~~~a~~la~~l~~p~~~~~~~~~~y~~~------~~-~~~~ 105 (205)
T 1yfz_A 33 EEILITEEQLKAKVKELGEMITRDYEGKDLVLIGVLKGAIMFMSGLSRAIDLPLSIDFLAVSSYGSS------TK-SSGI 105 (205)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTHHHHHHHHHHTCCSCCEEEEEEEEECSHH------HH-HHCC
T ss_pred ceEEcCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcCCHHHHHHHHHHhCCCceeEEEEEEeccCC------cc-ccce
Confidence 34678888898888888887753 2689999999999999999999999996 23332211000 00 0011
Q ss_pred eeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 030139 112 DVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 165 (182)
Q Consensus 112 ~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~ 165 (182)
..+........+|++||||||+++||+|+.++++.|++.|++.|.++++++++.
T Consensus 106 ~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~ 159 (205)
T 1yfz_A 106 VKIIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPE 159 (205)
T ss_dssp EEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred EEEeccCCCCCCcCEEEEECCccCcHHHHHHHHHHHHhcCCCEEEEEEEEecCc
Confidence 111111123478999999999999999999999999999999999999998863
No 33
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=99.73 E-value=7.7e-18 Score=137.70 Aligned_cols=118 Identities=21% Similarity=0.293 Sum_probs=90.8
Q ss_pred HHHHHHHhcC-CCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEE
Q 030139 50 IDLFVERYKD-KNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERAL 128 (182)
Q Consensus 50 ~~~la~~~~~-~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~Vl 128 (182)
+..|++++.+ .+.++|++++.||+++|..+|+.+++|+.+++|.++.++ ...+.+. +...+||+|+
T Consensus 143 ~~~La~~i~~~~~~~vVv~pd~Gg~~~a~~la~~l~~p~~~i~k~r~~~~------------~~~~~l~-g~~v~Gk~Vl 209 (284)
T 1u9y_A 143 VPKLAEYVKDKLNDPIVLAPDKGALEFAKTASKILNAEYDYLEKTRLSPT------------EIQIAPK-TLDAKDRDVF 209 (284)
T ss_dssp HHHHHHHHTTTCSSCEEEESSGGGHHHHHHHHHHHTCCEEEBC----------------------CCBS-SCCCTTCCEE
T ss_pred HHHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHhCCCEEEEEEEEcCCC------------eEEEEec-CccCCCCEEE
Confidence 4455555543 467899999999999999999999999988877653211 0111111 2247899999
Q ss_pred EEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccCCCCcccc
Q 030139 129 IVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL 180 (182)
Q Consensus 129 lVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~~~~~~l 180 (182)
||||++|||+|+.++++.|++.|++.+.++++|+....++.++|.+.++..+
T Consensus 210 IVDDii~TG~Tl~~aa~~Lk~~Ga~~V~~~~~h~v~s~~a~~~l~~~~i~~v 261 (284)
T 1u9y_A 210 IVDDIISTGGTMATAVKLLKEQGAKKIIAACVHPVLIGDALNKLYSAGVEEV 261 (284)
T ss_dssp EEEEECSSSHHHHHHHHHHHHTTCCSEEEEEEECCCCTTHHHHHHHHTCSEE
T ss_pred EEecccCchHHHHHHHHHHHHCCCcEEEEEEEeEecCcHHHHHHHhCCCCEE
Confidence 9999999999999999999999999999999999988889999887766554
No 34
>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding P pyrimidine biosynthesis; 1.60A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 1a4x_A 2igb_A* 1xz8_A* 1non_A 1xzn_A*
Probab=99.72 E-value=2.1e-17 Score=126.32 Aligned_cols=124 Identities=19% Similarity=0.241 Sum_probs=85.8
Q ss_pred hhhhcCHHHHHHHHHHHHHHhcC----CCccEEEeeCCCChhhHHHHHHHhC----CC--eEeeeccCC-CCCceeeeee
Q 030139 37 TTLLLDTKAFRDTIDLFVERYKD----KNISVVAGIEARGFIFGPPIALAIG----AK--FVPMRKPKK-LPGEVISEEY 105 (182)
Q Consensus 37 ~~l~~~~~~~~~~~~~la~~~~~----~~~d~Iv~v~~~G~~~a~~la~~l~----vp--~~~~rk~~~-~~~~~~~~~~ 105 (182)
..++.+++.+..+...|++++.. .++|+|+|++.||+++|..+|+.++ +| +..+++.+. ..+.......
T Consensus 4 ~~~l~~~~~i~~~~~~la~~i~~~~~~~~~~~iv~i~~~G~~~a~~la~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 83 (181)
T 1a3c_A 4 KAVILDEQAIRRALTRIAHEMIERNKGMNNCILVGIKTRGIYLAKRLAERIEQIEGNPVTVGEIDITLYRDDLSKKTSND 83 (181)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHCC----CEEEEESHHHHHHHHHHHHHHHHHHSSCCEEEEEEEECCC--------CC
T ss_pred ccCccCHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcCCCHHHHHHHHHHHhHHhCCCcccCeEEEEEecCcccccCccc
Confidence 34677888888888888887753 2689999999999999999999997 44 333333221 1111000000
Q ss_pred eeeccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcC-CeEEEEEEEEecC
Q 030139 106 SLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVG-VHVVECACVIELP 164 (182)
Q Consensus 106 ~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~g-a~~v~v~~l~~~~ 164 (182)
......+.+ ....+|++||||||++|||+|+.++++.|++.| ++.+.+++++++.
T Consensus 84 --~~~~~~~~~--~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~~~l~~k~ 139 (181)
T 1a3c_A 84 --EPLVKGADI--PVDITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVDRG 139 (181)
T ss_dssp --CCEEEEEEC--SSCCTTSEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred --eeeeccccc--CcCCCCCEEEEEeCccCcHHHHHHHHHHHHhcCCCcEEEEEEEEccC
Confidence 000011111 234789999999999999999999999999997 9999999999875
No 35
>2ywu_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 2ywt_A* 2yws_A* 3acb_A 3acc_A* 3acd_A*
Probab=99.72 E-value=6.5e-17 Score=124.14 Aligned_cols=120 Identities=18% Similarity=0.186 Sum_probs=88.6
Q ss_pred hhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCCChhhHHHHHHHhCCCeE--eeeccCCCCCceeeeeeeeecccee
Q 030139 39 LLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFV--PMRKPKKLPGEVISEEYSLEYGKDV 113 (182)
Q Consensus 39 l~~~~~~~~~~~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l~vp~~--~~rk~~~~~~~~~~~~~~~~~~~~~ 113 (182)
++.+++.++...+.|++++.+ .+.++|||++.||+++|..+|+.+++|+. +++..+...+.. ..+.-.
T Consensus 12 ~li~~~~i~~~i~~La~~I~~~~~~~~~vvVgi~~gg~~~a~~la~~L~~p~~~~~i~~~~y~~~~~-------~~~~v~ 84 (181)
T 2ywu_A 12 VQISAEAIKKRVEELGGEIARDYQGKTPHLICVLNGAFIFMADLVRAIPLPLTMDFIAISSYGNAFK-------SSGEVE 84 (181)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHTTTCCCEEEEEETTTHHHHHHHHTTCCSCCEEEEEEEC-------------------C
T ss_pred EEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEECchhHHHHHHHHHHcCCCceEEEEEEEEecCCcc-------ccCcEE
Confidence 577888888888888887754 26799999999999999999999999864 333222100000 001111
Q ss_pred EEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCC
Q 030139 114 MEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPE 165 (182)
Q Consensus 114 ~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~ 165 (182)
+........+|++||||||+++||+|+.++++.|++.|++.+.++++++++.
T Consensus 85 i~~~~~~~~~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~ 136 (181)
T 2ywu_A 85 LLKDLRLPIHGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVRVAALLSKPS 136 (181)
T ss_dssp EEECCCSCCTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred EEecCCCCCCCCEEEEECCeeCChHHHHHHHHHHHhcCCcEEEEEEEEECCC
Confidence 1111123478999999999999999999999999999999999999999863
No 36
>3ohp_A Hypoxanthine phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Vibrio cholerae} SCOP: c.61.1.1 PDB: 1g9s_A* 1g9t_A* 1grv_A 1j7j_A
Probab=99.71 E-value=1.2e-16 Score=122.18 Aligned_cols=120 Identities=15% Similarity=0.203 Sum_probs=88.1
Q ss_pred hhhcCHHHHHHHHHHHHHHhcC-C--Cc-cEEEeeCCCChhhHHHHHHHhCCCe--EeeeccCCCCCceeeeeeeeeccc
Q 030139 38 TLLLDTKAFRDTIDLFVERYKD-K--NI-SVVAGIEARGFIFGPPIALAIGAKF--VPMRKPKKLPGEVISEEYSLEYGK 111 (182)
Q Consensus 38 ~l~~~~~~~~~~~~~la~~~~~-~--~~-d~Iv~v~~~G~~~a~~la~~l~vp~--~~~rk~~~~~~~~~~~~~~~~~~~ 111 (182)
.++.+++.++...+.|++++.+ . +. ++|+|++.||+++|..+|+.+++|+ .++++.++..+. . ..+.
T Consensus 6 ~~l~s~~~i~~~i~~La~~I~~~~~~~~~~vvVgi~~gG~~~a~~la~~L~~~~~~~~i~~~~y~~~~-~------~~~~ 78 (177)
T 3ohp_A 6 EVMISEQEVAQRIRELGQQITEHYQGSSDLVLVGLLRGSFVFMADLARQIHLTHQVDFMTASSYGNSM-Q------SSRD 78 (177)
T ss_dssp EEEECHHHHHHHHHHHHHHHHHHTTTCSCEEEEEETTTTHHHHHHHHHTCCSCCEEEEEEECC---------------CC
T ss_pred EEeeCHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECcchHHHHHHHHHHcCCCceEEEEEEEEEcCCC-c------cCCc
Confidence 3567888888888888877653 2 34 8999999999999999999999986 334433211100 0 0011
Q ss_pred eeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecC
Q 030139 112 DVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELP 164 (182)
Q Consensus 112 ~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~ 164 (182)
-.+........+|++||||||+++||+|+.++++.|++.|++.+.++++++++
T Consensus 79 v~i~~~~~~~~~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~~~ 131 (177)
T 3ohp_A 79 VRILKDLDDDIKGKDVLLVEDIIDTGNTLNKVKEILALREPKSIRICTLLDKP 131 (177)
T ss_dssp CCEEECCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECG
T ss_pred EEEecCCCcccCCCEEEEEeeEeCcHHHHHHHHHHHHhcCCcEEEEEEEEECC
Confidence 11111112347899999999999999999999999999999999999999986
No 37
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=99.71 E-value=4.2e-17 Score=135.28 Aligned_cols=116 Identities=21% Similarity=0.170 Sum_probs=89.6
Q ss_pred HHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEE
Q 030139 51 DLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIV 130 (182)
Q Consensus 51 ~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllV 130 (182)
+.+.+.+.+.+.++||+++.||+.+|..+|+.|++|+.+++|+++.++.. ....+ ....+||+|+||
T Consensus 153 ~~i~~~~~~~~~~vVVspd~Ggv~~A~~lA~~L~~~~~~i~K~r~~~~~v-----------~~~~l--~g~v~gk~viIV 219 (326)
T 3s5j_B 153 KWIRENISEWRNCTIVSPDAGGAKRVTSIADRLNVDFALIHKERKKANEV-----------DRMVL--VGDVKDRVAILV 219 (326)
T ss_dssp HHHHHHCTTGGGCEEEESSGGGHHHHHHHHHHHTCEEEEEEEC------------------CCEEE--ESCCTTSEEEEE
T ss_pred HHHHHhcCcCCCcEEEEECCCchHHHHHHHHHcCCCEEEEEEEecCCCee-----------eEEec--cccCCCCEEEEE
Confidence 33333443345689999999999999999999999999988876422210 01122 134789999999
Q ss_pred ecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccCCCCccc
Q 030139 131 DDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFV 179 (182)
Q Consensus 131 DDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~~~~~~ 179 (182)
||+++||+|+.++++.|++.|++.+.++++|+....++.++|.+.++..
T Consensus 220 DDii~TG~Tl~~a~~~L~~~Ga~~v~~~~tH~v~~~~a~e~l~~~~i~~ 268 (326)
T 3s5j_B 220 DDMADTCGTICHAADKLLSAGATRVYAILTHGIFSGPAISRINNACFEA 268 (326)
T ss_dssp EEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECCCTTHHHHHHHSCCSE
T ss_pred ccccCCcHHHHHHHHHHHHcCCCEEEEEEEecccCchHHHHHhhCCCCE
Confidence 9999999999999999999999999999999998888899887655543
No 38
>1nul_A XPRT, xanthine-guanine phosphoribosyltransferase; purine salvage enzym; 1.80A {Escherichia coli} SCOP: c.61.1.1 PDB: 1a96_A* 1a95_A 1a98_A 1a97_A*
Probab=99.70 E-value=6.3e-17 Score=120.78 Aligned_cols=110 Identities=16% Similarity=0.235 Sum_probs=85.0
Q ss_pred hhcCHHHHHHHHHHHHHHhcC-CCccEEEeeCCCChhhHHHHHHHhCCC-eEeeeccCCCCCceeeeeeeeeccceeEEE
Q 030139 39 LLLDTKAFRDTIDLFVERYKD-KNISVVAGIEARGFIFGPPIALAIGAK-FVPMRKPKKLPGEVISEEYSLEYGKDVMEM 116 (182)
Q Consensus 39 l~~~~~~~~~~~~~la~~~~~-~~~d~Iv~v~~~G~~~a~~la~~l~vp-~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l 116 (182)
++.+++.++..+..|++++.+ .++++|+|+++||+++|..+|+.+++| +.+++...... .+.+...+
T Consensus 5 ~l~~~~~i~~~~~~La~~i~~~~~~~~vvgi~~Gg~~~a~~la~~l~~~~~~~i~~~~y~~-----------~~~~~~~~ 73 (152)
T 1nul_A 5 YIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGALLARELGIRHVDTVCISSYDH-----------DNQRELKV 73 (152)
T ss_dssp EECCHHHHHHHHHHHHHHHCSGGGCSEEEEEETTTHHHHHHHHHHHTCCCEEEEEEEC-------------------CEE
T ss_pred EecCHHHHHHHHHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHcCCCcceEEEEEEecC-----------cccceEEE
Confidence 567889999999999999876 457899999999999999999999999 65554222100 01111222
Q ss_pred EccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecC
Q 030139 117 HVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELP 164 (182)
Q Consensus 117 ~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~ 164 (182)
..+...+|++||||||+++||+||.++++.|++ +.+++++++.
T Consensus 74 ~~~~~~~gk~VliVDDii~TG~Tl~~a~~~l~~-----v~~a~L~~k~ 116 (152)
T 1nul_A 74 LKRAEGDGEGFIVIDDLVDTGGTAVAIREMYPK-----AHFVTIFAKP 116 (152)
T ss_dssp EECCSSCCTTEEEEEEEECTTSSHHHHHHHCTT-----SEEEEEEECG
T ss_pred ecCCCCCcCEEEEEEeecCchHHHHHHHHHHhh-----CCEEEEEECC
Confidence 223346899999999999999999999999987 7889999986
No 39
>1ufr_A TT1027, PYR mRNA-binding attenuation protein; pyrimidine nucleotide biosynthesis, transcriptional attenuation, RNA-binding protein; 2.60A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.69 E-value=1.2e-16 Score=122.22 Aligned_cols=121 Identities=17% Similarity=0.177 Sum_probs=84.8
Q ss_pred hhcCHHHHHHHHHHHHHHhcC----CCccEEEeeCCCChhhHHHHHHHhC----CCeE--eeeccCCCCCceeeeeeeee
Q 030139 39 LLLDTKAFRDTIDLFVERYKD----KNISVVAGIEARGFIFGPPIALAIG----AKFV--PMRKPKKLPGEVISEEYSLE 108 (182)
Q Consensus 39 l~~~~~~~~~~~~~la~~~~~----~~~d~Iv~v~~~G~~~a~~la~~l~----vp~~--~~rk~~~~~~~~~~~~~~~~ 108 (182)
++.+++.+......|+.++.. .+.++|+|++.||+++|..+|+.++ +|+. .+++.+..... .. ....
T Consensus 6 ~l~~~~~i~~~~~~La~~i~~~~~~~~~~~iv~v~~rG~~~a~~la~~l~~~~~~~~~~~~l~~~~~~~~~-~~--~~~~ 82 (181)
T 1ufr_A 6 ELMNAPEMRRALYRIAHEIVEANKGTEGLALVGIHTRGIPLAHRIARFIAEFEGKEVPVGVLDITLYRDDL-TE--IGYR 82 (181)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHTSSTTEEEEEETTTHHHHHHHHHHHHHHHHCSCCCEEEEEEEC--------------
T ss_pred eecCHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCChHHHHHHHHHHhHHhCCCcccCeEEEEEecCcc-cc--cccc
Confidence 466777778777778776642 3567999999999999999999987 7763 23322110000 00 0000
Q ss_pred ccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcC-CeEEEEEEEEecC
Q 030139 109 YGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVG-VHVVECACVIELP 164 (182)
Q Consensus 109 ~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~g-a~~v~v~~l~~~~ 164 (182)
.....+.+ ....+|++||||||++|||+|+.++++.|++.| ++.+.+++++++.
T Consensus 83 ~~~~~~~~--~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~~~l~~~~ 137 (181)
T 1ufr_A 83 PQVRETRI--PFDLTGKAIVLVDDVLYTGRTARAALDALIDLGRPRRIYLAVLVDRG 137 (181)
T ss_dssp CEEEEEEE--CSCCTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred ceeccccc--CcCCCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCcEEEEEEEEcCC
Confidence 00011222 233689999999999999999999999999999 8999999999885
No 40
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.69 E-value=1.3e-16 Score=124.75 Aligned_cols=121 Identities=25% Similarity=0.297 Sum_probs=80.6
Q ss_pred HHHHHHHHhcC--CCccEEEeeCCCChhhHHHHHHHhCCCeEe--eeccCCCCCceeeeeeeeeccceeEEE--------
Q 030139 49 TIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAIGAKFVP--MRKPKKLPGEVISEEYSLEYGKDVMEM-------- 116 (182)
Q Consensus 49 ~~~~la~~~~~--~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~--~rk~~~~~~~~~~~~~~~~~~~~~~~l-------- 116 (182)
+++.|++.+.+ .+.++|+|+|+||+++|..+|+.+++|+.. .++.+...++-....-..+.+ ...+
T Consensus 9 a~~~La~~i~~~~~~~~vVv~v~rGg~~~A~~la~~l~~p~~~~~~rk~~~~~~~e~~~ga~s~~g--~~~~~~~~~~~~ 86 (208)
T 1wd5_A 9 AGALLAEALAPLGLEAPVVLGLPRGGVVVADEVARRLGGELDVVLVRKVGAPGNPEFALGAVGEGG--ELVLMPYALRYA 86 (208)
T ss_dssp HHHHHHHHHGGGCCCSCEEEECTTHHHHHHHHHHHHHTCEEEECCEEEEEETTEEEEEEEEEETTC--CEEECTTHHHHS
T ss_pred HHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHHhCCCeEEEEEEEecCCCCchhhcceecCCC--cEEechhhhccc
Confidence 34444444432 367899999999999999999999999866 444332110000000000000 0000
Q ss_pred --------------------------EccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCccccc
Q 030139 117 --------------------------HVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRE 170 (182)
Q Consensus 117 --------------------------~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~ 170 (182)
......+||+||||||++|||+|+.++++.|++.|++.|.+++.+... ++.+
T Consensus 87 ~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~V~v~~~v~~~--~~~~ 164 (208)
T 1wd5_A 87 DQSYLEREAARQRDVLRKRAERYRRVRPKAARKGRDVVLVDDGVATGASMEAALSVVFQEGPRRVVVAVPVASP--EAVE 164 (208)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCTTSEEEEECSCBSSCHHHHHHHHHHHTTCCSEEEEEEEEBCH--HHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCEEEEECCCccHHHHHHHHHHHHHHcCCCEEEEEEEEcCH--HHHH
Confidence 001247899999999999999999999999999999999999988764 4555
Q ss_pred ccC
Q 030139 171 RLG 173 (182)
Q Consensus 171 ~l~ 173 (182)
+|.
T Consensus 165 ~l~ 167 (208)
T 1wd5_A 165 RLK 167 (208)
T ss_dssp HHH
T ss_pred Hhc
Confidence 443
No 41
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=99.68 E-value=8.3e-17 Score=133.30 Aligned_cols=108 Identities=20% Similarity=0.260 Sum_probs=80.9
Q ss_pred CCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHH
Q 030139 60 KNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGT 139 (182)
Q Consensus 60 ~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~T 139 (182)
.+.++||+++.||+.+|..+|+.|++|+.+++|+++.++.. ..+.+. ...+||+|+||||+++||+|
T Consensus 165 ~~~~vVVspd~Ggv~~A~~lA~~L~~p~~~i~K~r~~~~~v-----------~~~~i~--g~v~gk~viiVDDii~TG~T 231 (319)
T 3dah_A 165 YPDLLVVSPDVGGVVRARALAKQLNCDLAIIDKRRPKANVA-----------EVMNII--GEVEGRTCVIMDDMVDTAGT 231 (319)
T ss_dssp CTTEEEECCSSTTHHHHHHHHHHTTCEEEC---------------------------------CCSEEEEEEEEESSCHH
T ss_pred CCCcEEEEeCCCccHHHHHHHHHhCCCEEEEEEEeccCCce-----------EEEEcc--ccCCCCEEEEEecccCchHH
Confidence 46689999999999999999999999999888766422110 011221 23789999999999999999
Q ss_pred HHHHHHHHHhcCCeEEEEEEEEecCCcccccccCCCCcccc
Q 030139 140 LSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL 180 (182)
Q Consensus 140 l~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~~~~~~l 180 (182)
+.++++.|++.|+..+.++++|+.+..++.++|.+.++..+
T Consensus 232 l~~a~~~L~~~Ga~~v~~~~tH~v~s~~a~~~l~~~~i~~v 272 (319)
T 3dah_A 232 LCKAAQVLKERGAKQVFAYATHPVLSGGAADRIAASALDEL 272 (319)
T ss_dssp HHHHHHHHHHTTCSCEEEEEEEECCCTTHHHHHHTSSCSEE
T ss_pred HHHHHHHHHHcCCCEEEEEEEeecCChHHHHHHHhCCCCEE
Confidence 99999999999999999999999988888899887665443
No 42
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=99.66 E-value=3.1e-16 Score=129.97 Aligned_cols=106 Identities=21% Similarity=0.288 Sum_probs=84.0
Q ss_pred CCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHH
Q 030139 60 KNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGT 139 (182)
Q Consensus 60 ~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~T 139 (182)
++..+||+++.||+.+|..+|+.+++|+..++|.+.... ....+.+. ...+||+|+||||++|||+|
T Consensus 166 ~~~~vVv~pd~Gg~~~A~~la~~L~~p~~~l~k~r~~~~-----------~~~~~~l~--~~v~gk~VlLVDDiitTG~T 232 (317)
T 1dku_A 166 LEDIVIVSPDHGGVTRARKLADRLKAPIAIIDKRRPRPN-----------VAEVMNIV--GNIEGKTAILIDDIIDTAGT 232 (317)
T ss_dssp CCSEEEEESSGGGHHHHHHHHHHTTCCEEEEECC--------------------CEEE--SCCTTCEEEEECSEESSCHH
T ss_pred CCCcEEEEeCcchHHHHHHHHHHhCCCEEEEEEEecccc-----------ceeEEEec--ccCCCCEEEEEecccCCCHH
Confidence 456799999999999999999999999988776543110 01122332 24789999999999999999
Q ss_pred HHHHHHHHHhcCCeEEEEEEEEecCCcccccccCCCCcc
Q 030139 140 LSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLF 178 (182)
Q Consensus 140 l~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~~~~~ 178 (182)
+.++++.|++.|++.|.++++|.....++.+++.+.++.
T Consensus 233 l~~aa~~Lk~~Ga~~V~~~~tH~v~~~~a~~~l~~~~i~ 271 (317)
T 1dku_A 233 ITLAANALVENGAKEVYACCTHPVLSGPAVERINNSTIK 271 (317)
T ss_dssp HHHHHHHHHHTTCSEEEEECSEECCCTTHHHHHHTSSEE
T ss_pred HHHHHHHHHHcCCcEEEEEEECcccChHHHHHHhhCCCC
Confidence 999999999999999999999998887888887765543
No 43
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=99.66 E-value=1.8e-16 Score=134.24 Aligned_cols=127 Identities=14% Similarity=0.132 Sum_probs=87.1
Q ss_pred HHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCC------C----ceeeeeeeeeccc--------
Q 030139 50 IDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLP------G----EVISEEYSLEYGK-------- 111 (182)
Q Consensus 50 ~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~------~----~~~~~~~~~~~~~-------- 111 (182)
++.+.+.+.+.+.++|++++.||+++|..+|+.|++|+.+++|++... + +.....+..+++.
T Consensus 180 a~~I~~~~~~~~~~vVV~pd~GGv~~A~~lA~~L~~pl~ii~k~r~~~~~e~~~gr~~~~~v~~~~~~~~g~~i~~~~~~ 259 (379)
T 2ji4_A 180 LQYIQEEIPDYRNAVIVAKSPASAKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHPSLEIPMLIPK 259 (379)
T ss_dssp HHHHHHHSTTGGGEEEEESSGGGHHHHHHHHHHTTCEEEEEC--------------------------------------
T ss_pred HHHHHHhcccCCCcEEEEEccchHHHHHHHHHHhCCCEEEEEEEeecccccccccccCCcccccccccccccchhhhhhh
Confidence 334444443345789999999999999999999999998887655311 0 0000000000000
Q ss_pred --eeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecCCcccccccCCCCcc
Q 030139 112 --DVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLF 178 (182)
Q Consensus 112 --~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~~~~~ 178 (182)
..+.+ ...++||+|+||||+++||+|+.++++.|++.|++.+.++++|+....++.++|.+.++.
T Consensus 260 ~~~~~~l--~g~v~Gk~viiVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~tH~v~s~~a~~~l~~s~id 326 (379)
T 2ji4_A 260 EKPPITV--VGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPRRIEESAID 326 (379)
T ss_dssp ---CCCE--ESCCTTSEEEEEEEEECSCHHHHHHHHHHHHTTCCEEEEEEEEECCCTTHHHHHHHSSCC
T ss_pred ccccccc--ccCCCCCEEEEEecCCCchHHHHHHHHHHHhcCCCEEEEEEEeecCCcHHHHHHHhCCCC
Confidence 00111 134899999999999999999999999999999999999999998887888888755443
No 44
>2xbu_A Hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage, FLIP pepti; HET: 5GP; 1.80A {Saccharomyces cerevisiae} PDB: 2jkz_A* 2jky_A*
Probab=99.65 E-value=1.1e-15 Score=120.80 Aligned_cols=127 Identities=18% Similarity=0.191 Sum_probs=89.2
Q ss_pred hhhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCC------CeEeeeccCCCCCceeeeeeeeeccc
Q 030139 38 TLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGA------KFVPMRKPKKLPGEVISEEYSLEYGK 111 (182)
Q Consensus 38 ~l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~v------p~~~~rk~~~~~~~~~~~~~~~~~~~ 111 (182)
.++.+++.++..++.|+..+.+.++++|+|+++||+++|..+|+.|++ |+.+++...+......... ..+.+.
T Consensus 6 ~~~is~~~i~~~i~~LA~~I~~~~~~vIVgI~~GG~~~A~~La~~L~~~~~~~lpi~~i~~s~y~~~~~~~~~-~~~~g~ 84 (221)
T 2xbu_A 6 KQYISYNNVHQLCQVSAERIKNFKPDLIIAIGGGGFIPARILRTFLKEPGVPTIRIFAIILSLYEDLNSVGSE-VEEVGV 84 (221)
T ss_dssp CEECCHHHHHHHHHHHHHHHTTTCCSEEEEEHHHHHHHHHHHHHHHCCTTSCCCEEEEEEEEEEC--------------C
T ss_pred eEecCHHHHHHHHHHHHHHhccCCCCEEEEECCCcHHHHHHHHHHhCCCCCCCccEEEEEEEEecCCcccccc-ccccCc
Confidence 467788899999999999996667899999999999999999999998 3444432111000000000 000011
Q ss_pred eeEE---EE---ccccCCCCeEEEEecccCchHHHHHHHHHHHh--------cCC---------eEEEEEEEEecCC
Q 030139 112 DVME---MH---VGAVQAGERALIVDDLVATGGTLSAAIRLLER--------VGV---------HVVECACVIELPE 165 (182)
Q Consensus 112 ~~~~---l~---~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~--------~ga---------~~v~v~~l~~~~~ 165 (182)
..+. +. .....+||+||||||+++||.||.+++++|++ .|+ ..+.+++++++..
T Consensus 85 ~~~~~~~~~~~~~~~~v~Gk~VLIVDDIidTG~Tl~aa~~~L~~~ga~~~~~~g~~~~~~~~~~~~v~iavL~~K~~ 161 (221)
T 2xbu_A 85 KVSRTQWIDYEQCKLDLVGKNVLIVDEVDDTRTTLHYALSELEKDAAEQAKAKGIDTEKSPEMKTNFGIFVLHDKQK 161 (221)
T ss_dssp EEEEEECCCHHHHTCCCTTCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHTTCCTTTCGGGSCEEEEEEEEEECS
T ss_pred eeeeeeeeecccccccCCCCEEEEEeccCCcHHHHHHHHHHHHhhcchhhhhcCccccccccCcceEEEEEEEeccc
Confidence 1110 10 02347899999999999999999999999997 786 5899999999864
No 45
>1w30_A PYRR bifunctional protein; transferase, glycosyltransferase, PSI, protein structure initiative, TB structural genomics consortium, TB; 1.9A {Mycobacterium tuberculosis} SCOP: c.61.1.1
Probab=99.64 E-value=9.4e-16 Score=119.44 Aligned_cols=123 Identities=17% Similarity=0.196 Sum_probs=86.3
Q ss_pred hhhhcCHHHHHHHHHHHHHHhcC-----------CCccEEEeeCCCChhhHHHHHHHh----CCCe--EeeeccCCCCCc
Q 030139 37 TTLLLDTKAFRDTIDLFVERYKD-----------KNISVVAGIEARGFIFGPPIALAI----GAKF--VPMRKPKKLPGE 99 (182)
Q Consensus 37 ~~l~~~~~~~~~~~~~la~~~~~-----------~~~d~Iv~v~~~G~~~a~~la~~l----~vp~--~~~rk~~~~~~~ 99 (182)
..++.+++.++.....|+..+.+ .+.++|+|++.||+++|..+|+.| ++|+ ..+.........
T Consensus 13 ~~~l~~~~~i~~~i~~La~~i~~~~~~~~~~~~~~~~~vvvgi~~gG~~~a~~La~~L~~~~g~p~~~~~l~~~~y~~~~ 92 (201)
T 1w30_A 13 SRELMSAANVGRTISRIAHQIIEKTALDDPVGPDAPRVVLLGIPTRGVTLANRLAGNITEYSGIHVGHGALDITLYRDDL 92 (201)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHTTTTSCCBTTBCCEEEEECTTHHHHHHHHHHHHHHHHHSCCCEEEECCCGGGCC--
T ss_pred ceEEeCHHHHHHHHHHHHHHHHHHccccccccccCCCcEEEEEcccHHHHHHHHHHHHhHHHCCCcccceEEEEEecCCc
Confidence 34677888888888888876542 256899999999999999999999 5764 233222110000
Q ss_pred eeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcC-CeEEEEEEEEecC
Q 030139 100 VISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVG-VHVVECACVIELP 164 (182)
Q Consensus 100 ~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~g-a~~v~v~~l~~~~ 164 (182)
..........+.+ .....+|++||||||++|||+|+.++++.|++.| ++.+.+++++++.
T Consensus 93 ----~~~~~~~~~~~~~-~~~~~~gk~VlLVDDVitTG~Tl~aa~~~L~~~G~a~~V~vavlv~k~ 153 (201)
T 1w30_A 93 ----MIKPPRPLASTSI-PAGGIDDALVILVDDVLYSGRSVRSALDALRDVGRPRAVQLAVLVDRG 153 (201)
T ss_dssp ----------CCCCCBC-CTTCSTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred ----cccccceeecccC-CCccCCCCEEEEECCccchHHHHHHHHHHHHhCCCCcEEEEEEEEecC
Confidence 0000000000111 0123789999999999999999999999999999 9999999999984
No 46
>3acd_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 3acc_A* 3acb_A*
Probab=99.61 E-value=4.8e-15 Score=113.69 Aligned_cols=121 Identities=17% Similarity=0.214 Sum_probs=88.0
Q ss_pred hhhhcCHHHHHHHHHHHHHHhcC---CCccEEEeeCCCChhhHHHHHHHhCCCeEe--eeccCCCCCceeeeeeeeeccc
Q 030139 37 TTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFVP--MRKPKKLPGEVISEEYSLEYGK 111 (182)
Q Consensus 37 ~~l~~~~~~~~~~~~~la~~~~~---~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~--~rk~~~~~~~~~~~~~~~~~~~ 111 (182)
..++.+.+.++...+.||.++.+ .+..+++|+.+||+++|..+++.++.|+.. +.-.+.... .. +.+.
T Consensus 10 ~~vlis~~~I~~~i~rlA~eI~e~~~~~~~vlvgIl~Gg~~fa~~L~~~l~~~~~~~~i~~ssy~~~------~~-~~g~ 82 (181)
T 3acd_A 10 GPVQISAEAIKKRVEELGGEIARDYQGKTPHLICVLNGAFIFMADLVRAIPLPLTMDFIAISSYGNA------FK-SSGE 82 (181)
T ss_dssp SSCCBCHHHHHHHHHHHHHHHHHHTTTCCCEEEEEETTTHHHHHHHHTTCCSCCEEEEEEEC------------------
T ss_pred ccEEeCHHHHHHHHHHHHHHHHHHhCCCCcEEEEEecCcHHHHHHHHHhcCCCccccceEEEEecCC------cC-CCCc
Confidence 34677888888888888877643 356799999999999999999999988643 221111000 00 0011
Q ss_pred eeEEEEccccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecC
Q 030139 112 DVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELP 164 (182)
Q Consensus 112 ~~~~l~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~ 164 (182)
...........+||+||||||+++||.||+++.+.|.+.|++.+.+++++++.
T Consensus 83 ~~~~~~~~~~i~gk~VllVDDIldTG~Tl~~~~~~l~~~~p~sv~~avLl~K~ 135 (181)
T 3acd_A 83 VELLKDLRLPIHGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVRVAALLSKP 135 (181)
T ss_dssp -CEEECCCSCCTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEECG
T ss_pred eEeccCCCcccCCCeeEEEEEEEcCchhHHHHHHHHhcCCCCEEEEEEEEEcC
Confidence 11111123458899999999999999999999999999999999999999975
No 47
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*
Probab=99.54 E-value=5.6e-14 Score=122.99 Aligned_cols=115 Identities=19% Similarity=0.195 Sum_probs=78.9
Q ss_pred HHHHHHHHHh----cCCCccEEEeeCCCChhhHHHHHHHhCCCeEe-eeccCCCCCceee--eeeeeeccceeEEEEccc
Q 030139 48 DTIDLFVERY----KDKNISVVAGIEARGFIFGPPIALAIGAKFVP-MRKPKKLPGEVIS--EEYSLEYGKDVMEMHVGA 120 (182)
Q Consensus 48 ~~~~~la~~~----~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~-~rk~~~~~~~~~~--~~~~~~~~~~~~~l~~~~ 120 (182)
.+++.|++.+ .+.++|+|+++|.+|+++|..+|+.+++|+.. +.|.+....++.. +..+...-...+... ..
T Consensus 277 ~lg~~La~~i~~~~~~~~~dvVv~vP~~g~~~A~~la~~lg~p~~~~~~k~r~~~~t~i~~~~~~R~~~v~~~~~~~-~~ 355 (504)
T 1ecf_A 277 NMGTKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQQLRRKSVRRKLNAN-RA 355 (504)
T ss_dssp HHHHHHHHHHHHHTTTCCCCEEEECTTTTHHHHHHHHHHHTCCBCCCEEECSCCCCCCCCSSSCCCCCCSTTTEEEC-GG
T ss_pred HHHHHHHHHHHHHcCCCCCeEEEEECCcHHHHHHHHHHHhCCCceeeEEEecccCCceeCccHHHHHHHHHhhhccc-cc
Confidence 4555555544 33458999999999999999999999999863 3232221111100 000000001123321 23
Q ss_pred cCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEec
Q 030139 121 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIEL 163 (182)
Q Consensus 121 ~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~ 163 (182)
.++||+||||||++|||+|+.++++.|+++||++|++++++..
T Consensus 356 ~v~Gk~VllVDDii~TG~Tl~~~~~~L~~~Ga~~V~~~~l~~~ 398 (504)
T 1ecf_A 356 EFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPE 398 (504)
T ss_dssp GTTTCCEEEEESCCSSSHHHHHHHHHHHHTTCSSEEEEESSCC
T ss_pred cCCCCeEEEEeccccccHHHHHHHHHHHhcCCcEEEEEEEecC
Confidence 4789999999999999999999999999999999999988643
No 48
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=99.47 E-value=9.6e-14 Score=120.24 Aligned_cols=114 Identities=18% Similarity=0.211 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEe-eeccCCCCCcee--eeeeeeeccceeEEEEcccc
Q 030139 45 AFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVP-MRKPKKLPGEVI--SEEYSLEYGKDVMEMHVGAV 121 (182)
Q Consensus 45 ~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~-~rk~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~ 121 (182)
....+++.|++.+. .+.|+|+++|.+|..+|..+|+.+|+|+.. +.|.+....++. .+..+.......+... ...
T Consensus 258 ~r~~lg~~La~~~~-~~~DvVV~VP~~g~~~A~~la~~lg~p~~~~l~k~r~~~~~~~~~~~~~R~~~~~~~~~~~-~~~ 335 (459)
T 1ao0_A 258 ARKNLGKMLAQESA-VEADVVTGVPDSSISAAIGYAEATGIPYELGLIKNRYVGRTFIQPSQALREQGVRMKLSAV-RGV 335 (459)
T ss_dssp HHHHHHHHHHHHHC-CCCSEEECCTTTTHHHHHHHHHHHCCCBCCCEEECTTCCTTSCCCCHHHHHHTCCSSEEEC-HHH
T ss_pred HHHHHHHHHHHhcc-cCCcEEEEECCcHHHHHHHHHHHhCCCCceeEEEecCCCccccCCCHHHHHhhhhhhcccc-ccc
Confidence 45567777777664 467999999999999999999999999863 333332111111 1000000011223321 234
Q ss_pred CCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEE
Q 030139 122 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACV 160 (182)
Q Consensus 122 ~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l 160 (182)
.+||+||||||++|||+|+.++++.|+++||++|.++++
T Consensus 336 v~gk~VlLVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l 374 (459)
T 1ao0_A 336 VEGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVKIS 374 (459)
T ss_dssp HTTCEEEEEESCCSSSHHHHHHHHHHHHTTCSEEEEEES
T ss_pred CCCCeEEEEeeeecCHHHHHHHHHHHHHcCCCEEEEEEe
Confidence 789999999999999999999999999999999999984
No 49
>1dqn_A Guanine phosphoribosyltransferase; protein-inhibitor complex, Mg IONS, pyrophosphate, transition state analogue; HET: IMU; 1.75A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1dqp_A*
Probab=99.46 E-value=5.9e-14 Score=111.32 Aligned_cols=111 Identities=7% Similarity=0.177 Sum_probs=82.9
Q ss_pred hhhcCHHHHHHHHHHHHHHhcC---C--CccEEEeeCCCChhhHHHHHHHhCCCeEe--eeccCCCCCceeeeeeeeecc
Q 030139 38 TLLLDTKAFRDTIDLFVERYKD---K--NISVVAGIEARGFIFGPPIALAIGAKFVP--MRKPKKLPGEVISEEYSLEYG 110 (182)
Q Consensus 38 ~l~~~~~~~~~~~~~la~~~~~---~--~~d~Iv~v~~~G~~~a~~la~~l~vp~~~--~rk~~~~~~~~~~~~~~~~~~ 110 (182)
.++.+++.+...++.||+++.+ . +.++|+|+++||+++|..+|+.+++|+.. ++..+ |..+..
T Consensus 33 ~vlis~~~I~~~i~~LA~~I~~~~~~~~~~~vvVgi~~Gg~~~a~~La~~L~~p~~v~~i~vs~----------y~~~~s 102 (230)
T 1dqn_A 33 HLLATFEECKALAADTARRMNEYYKDVAEPVTLVALLTGAYLYASLLTVHLTFPYTLHFVKVSS----------YKGTRQ 102 (230)
T ss_dssp EEEECHHHHHHHHHHHHHHHHHHHTTCSSCEEEEEETTTHHHHHHHHHTTCCSCEEEEEECCEE----------EECSSC
T ss_pred cEecCHHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCCHHHHHHHHHHhCCCceEEEEEEEE----------eCCCcc
Confidence 4677888888888888877752 2 67899999999999999999999999743 22211 110000
Q ss_pred ceeEEE-Ec--cccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEEecC
Q 030139 111 KDVMEM-HV--GAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELP 164 (182)
Q Consensus 111 ~~~~~l-~~--~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~~~~ 164 (182)
.+ ..+ .. ....+||+||||||+++||.||.++++.|++ +.++++++++
T Consensus 103 ~~-v~i~~~~l~~~v~Gk~VLIVDDIidTG~Tl~~a~~~L~~-----V~vavLl~k~ 153 (230)
T 1dqn_A 103 ES-VVFDEEDLKQLKEKREVVLIDEYVDSGHTIFSIQEQIKH-----AKICSCFVKD 153 (230)
T ss_dssp EE-EECCHHHHHHHHHCSSEEEEEEEESSSHHHHHHHHHSTT-----CEEEEEEESC
T ss_pred Cc-eEEEeccCccCCCCCEEEEEeeEcChHHHHHHHHHHhhc-----CEEEEEEECC
Confidence 01 222 11 1237899999999999999999999999988 7888899886
No 50
>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1
Probab=99.16 E-value=1.1e-10 Score=91.27 Aligned_cols=101 Identities=25% Similarity=0.258 Sum_probs=72.8
Q ss_pred CccEEEeeCCCChhhHHHHHHHhC-CCeEeeeccCCCCCceeeeeeeeecccee-EEEEccccCCCCeEEEEecccCchH
Q 030139 61 NISVVAGIEARGFIFGPPIALAIG-AKFVPMRKPKKLPGEVISEEYSLEYGKDV-MEMHVGAVQAGERALIVDDLVATGG 138 (182)
Q Consensus 61 ~~d~Iv~v~~~G~~~a~~la~~l~-vp~~~~rk~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~gk~VllVDDvitTG~ 138 (182)
+..++|++.++|++++..+.+.+. .++..+.+.+.. +..+.. ++.......+|++|+||||+++||+
T Consensus 70 ~~~~vV~Ilr~G~~~~~~L~~~l~~~~~~~i~~~r~~-----------~t~~~~~~~~~lp~~i~~~~VllvDd~l~TG~ 138 (209)
T 1i5e_A 70 KKLGVIPILRAGIGMVDGILKLIPAAKVGHIGLYRDP-----------QTLKPVEYYVKLPSDVEERDFIIVDPMLATGG 138 (209)
T ss_dssp CCEEEEEBTTGGGGGHHHHHHHCTTSEECEEEEECCT-----------TCSSCEEEEEECCTTTTTSEEEEECSEESSSH
T ss_pred CceEEEEEecCChHHHHHHHHhCCCCeEEEEEEEEcC-----------CCCceEEEEEcCCCccCCCEEEEEcCCCcCHH
Confidence 345899999999999999999883 444333322211 011111 1222233578999999999999999
Q ss_pred HHHHHHHHHHhcCCeEEEEEEEEecCCcccccccCC
Q 030139 139 TLSAAIRLLERVGVHVVECACVIELPELKGRERLGE 174 (182)
Q Consensus 139 Tl~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~ 174 (182)
|+.++++.|++.|++.+.+++++..+ .+.+++.+
T Consensus 139 T~~~a~~~L~~~G~~~I~~~~lv~~~--~g~~~l~~ 172 (209)
T 1i5e_A 139 SAVAAIDALKKRGAKSIKFMCLIAAP--EGVKAVET 172 (209)
T ss_dssp HHHHHHHHHHHTTCCCEEEECSEECH--HHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEEEEEECH--HHHHHHHH
Confidence 99999999999999999999887764 56666653
No 51
>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomic PSI, protein structure initiative, joint center for structu genomics; HET: U5P; 2.30A {Thermotoga maritima} SCOP: c.61.1.1
Probab=99.11 E-value=1.5e-10 Score=91.19 Aligned_cols=100 Identities=19% Similarity=0.237 Sum_probs=73.7
Q ss_pred ccEEEeeCCCChhhHHHHHHHh-CCCeEeeeccCCCCCceeeeeeeeeccceeE-EEEccccCCCCeEEEEecccCchHH
Q 030139 62 ISVVAGIEARGFIFGPPIALAI-GAKFVPMRKPKKLPGEVISEEYSLEYGKDVM-EMHVGAVQAGERALIVDDLVATGGT 139 (182)
Q Consensus 62 ~d~Iv~v~~~G~~~a~~la~~l-~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~gk~VllVDDvitTG~T 139 (182)
.-++|++.++|+.++..+++.+ +.++..+...+... .++... +.......+|++|+||||+++||+|
T Consensus 83 ~lviV~IlrgG~~~~~~l~~~lp~a~vg~I~~~Rd~~-----------t~~~~~~~~~lp~di~gr~VilvDd~laTG~T 151 (221)
T 1o5o_A 83 DIVVVPILRAGLVMADGILELLPNASVGHIGIYRDPE-----------TLQAVEYYAKLPPLNDDKEVFLLDPMLATGVS 151 (221)
T ss_dssp TEEEEEEETTHHHHHHHHHHHSTTCEECEEEEEECTT-----------TCCEEEEEEECCCCCTTCEEEEECSEESSSHH
T ss_pred eEEEEEEecchHHHHHHHHHhCCCCcEEEEEEEEcCC-----------CCceeEEEecCCCccCCCEEEEECCccccHHH
Confidence 3488999999999999999998 45554443332110 111111 2222345789999999999999999
Q ss_pred HHHHHHHHHhcCCeEEEEEEEEecCCcccccccCC
Q 030139 140 LSAAIRLLERVGVHVVECACVIELPELKGRERLGE 174 (182)
Q Consensus 140 l~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~ 174 (182)
+.++++.|++.|++.+.+++++..+ .+.+++.+
T Consensus 152 l~~ai~~L~~~G~~~I~~~~lv~~~--~g~~~l~~ 184 (221)
T 1o5o_A 152 SIKAIEILKENGAKKITLVALIAAP--EGVEAVEK 184 (221)
T ss_dssp HHHHHHHHHHTTCCEEEEECSEECH--HHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEEEEeCH--HHHHHHHH
Confidence 9999999999999999999988765 56766654
No 52
>2e55_A Uracil phosphoribosyltransferase; structural genomics; 2.15A {Aquifex aeolicus}
Probab=99.00 E-value=1.8e-09 Score=84.27 Aligned_cols=99 Identities=24% Similarity=0.259 Sum_probs=71.4
Q ss_pred ccEEEeeCCCChhhHHHHHHHhC-CCeEeeeccCCCCCceeeeeeeeeccceeE-EEEccccCCCCeEEEEecccCchHH
Q 030139 62 ISVVAGIEARGFIFGPPIALAIG-AKFVPMRKPKKLPGEVISEEYSLEYGKDVM-EMHVGAVQAGERALIVDDLVATGGT 139 (182)
Q Consensus 62 ~d~Iv~v~~~G~~~a~~la~~l~-vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~gk~VllVDDvitTG~T 139 (182)
.-++||+.++|+.++..+.+.+. .++..+...+. + +.++... +.... ..+|++|+||||+++||+|
T Consensus 69 ~~~~V~ILraG~~~~~~l~~~lp~~~vg~i~~~rd-~----------~t~~~~~~~~~lp-di~~r~vilvDd~laTG~T 136 (208)
T 2e55_A 69 EIVFVPILRAGLSFLEGALQVVPNAKVGFLGIKRN-E----------ETLESHIYYSRLP-ELKGKIVVILDPMLATGGT 136 (208)
T ss_dssp GEEEEEEETTTHHHHHHHHHHSTTCEECEEEEEEC-T----------TTCCEEEEEEECC-CCBTSEEEEECSEESSSHH
T ss_pred cEEEEEEecchHHHHHHHHHhCCCCcEEEEEEEEe-c----------CCCceEEEecCCC-CCCCCEEEEECCccccHHH
Confidence 34889999999999999999885 12211211110 0 0111222 22224 5789999999999999999
Q ss_pred HHHHHHHHHhcCCeEEEEEEEEecCCcccccccCC
Q 030139 140 LSAAIRLLERVGVHVVECACVIELPELKGRERLGE 174 (182)
Q Consensus 140 l~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~ 174 (182)
+.++++.|++.|++.+.+++++..+ .+.+++.+
T Consensus 137 ~~~ai~~L~~~G~~~I~~~~lv~~~--~g~~~l~~ 169 (208)
T 2e55_A 137 LEVALREILKHSPLKVKSVHAIAAP--EGLKRIEE 169 (208)
T ss_dssp HHHHHHHHHTTCBSEEEEEEEEECH--HHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEEEEECH--HHHHHHHH
Confidence 9999999999999999999998865 56766653
No 53
>2ehj_A Uracil phosphoribosyltransferase; structural genomics; 2.80A {Escherichia coli}
Probab=99.00 E-value=2.3e-09 Score=83.65 Aligned_cols=100 Identities=23% Similarity=0.254 Sum_probs=71.3
Q ss_pred ccEEEeeCCCChhhHHHHHHHhC-CCeEeeeccCCCCCceeeeeeeeeccceeE-EEEccccCCCCeEEEEecccCchHH
Q 030139 62 ISVVAGIEARGFIFGPPIALAIG-AKFVPMRKPKKLPGEVISEEYSLEYGKDVM-EMHVGAVQAGERALIVDDLVATGGT 139 (182)
Q Consensus 62 ~d~Iv~v~~~G~~~a~~la~~l~-vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~gk~VllVDDvitTG~T 139 (182)
.-++||+.++|+.++..+.+.+. .++..+...+.. +.++... +.......+|++|+||||++.||+|
T Consensus 70 ~l~~V~ILraG~~~~~~l~~~ip~~~vg~i~~~rd~-----------~t~~~~~~~~~lp~di~~r~VilvDd~laTG~T 138 (208)
T 2ehj_A 70 KITVVPILRAGLGMMDGVLENVPSARISVVGMYRNE-----------ETLEPVPYFQKLVSNIDERMALIVDPMLATGGS 138 (208)
T ss_dssp CCEEEEBTTGGGGGHHHHHHHCTTCEECEEEEEECT-----------TTCCEEEEEEECCSCGGGCEEEEEEEEESSCHH
T ss_pred ceEEEEeecCHHHHHHHHHHhCCcCceeEEEEEEcC-----------CCCceEEEecCCCCccCCCEEEEECCccccHHH
Confidence 34899999999999999999885 122112111100 0111122 1222345789999999999999999
Q ss_pred HHHHHHHHHhcCCeEEEEEEEEecCCcccccccCC
Q 030139 140 LSAAIRLLERVGVHVVECACVIELPELKGRERLGE 174 (182)
Q Consensus 140 l~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~ 174 (182)
+.++++.|++.|++.+.+++++..+ .+.+++.+
T Consensus 139 ~~~ai~~L~~~G~~~I~~~~lv~~p--~g~~~l~~ 171 (208)
T 2ehj_A 139 VIATIDLLKKAGCSSIKVLVLVAAP--EGIAALEK 171 (208)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEEECH--HHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEEEEeCH--HHHHHHHH
Confidence 9999999999999999999998875 56666553
No 54
>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics, RI structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: c.61.1.1
Probab=98.91 E-value=1.6e-09 Score=84.46 Aligned_cols=100 Identities=25% Similarity=0.348 Sum_probs=70.0
Q ss_pred ccEEEeeCCCChhhHHHHHHHhC-CCeEeeeccCCCCCceeeeeeeeeccceeE-EEEccccCCCCeEEEEecccCchHH
Q 030139 62 ISVVAGIEARGFIFGPPIALAIG-AKFVPMRKPKKLPGEVISEEYSLEYGKDVM-EMHVGAVQAGERALIVDDLVATGGT 139 (182)
Q Consensus 62 ~d~Iv~v~~~G~~~a~~la~~l~-vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~gk~VllVDDvitTG~T 139 (182)
.-++||+.++|+.++..+.+.+. .++..+.-.+. + +.++... +.......+|++|+||||++.||+|
T Consensus 70 ~l~~V~ILraG~~~~~~l~~~ip~~~vg~I~~~rd-~----------~t~~~~~~~~~lp~di~~r~vilvDd~laTG~T 138 (208)
T 1v9s_A 70 KLALVAILRAGLVMVEGILKLVPHARVGHIGLYRD-P----------ESLNPVQYYIKLPPDIAERRAFLLDPMLATGGS 138 (208)
T ss_dssp CCEEEEETTTHHHHHHHHHTTCTTCEEEEEEEC--------------------CEEEECCSCGGGSCEEEECSEESSSHH
T ss_pred ceEEEEeccchHHHHHHHHHhCCCCeeeEEEEEEc-C----------CCCCceEEeccCCCccCCCEEEEECCccccHHH
Confidence 34899999999999999998875 22222221111 0 0111111 2222345789999999999999999
Q ss_pred HHHHHHHHHhcCCeEEEEEEEEecCCcccccccCC
Q 030139 140 LSAAIRLLERVGVHVVECACVIELPELKGRERLGE 174 (182)
Q Consensus 140 l~~~~~~L~~~ga~~v~v~~l~~~~~~~~~~~l~~ 174 (182)
+.++++.|++.|++.+.+++++..+ .+.+++.+
T Consensus 139 ~~~ai~~L~~~G~~~I~~~~lv~~~--~g~~~l~~ 171 (208)
T 1v9s_A 139 ASLALSLLKERGATGVKLMAILAAP--EGLERIAK 171 (208)
T ss_dssp HHHHHHHHHHTTCCSCEEEEEEECH--HHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEEEEeCH--HHHHHHHH
Confidence 9999999999999999999998765 56666653
No 55
>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1bd4_D 1jlr_A* 1jls_B* 1upf_D 1upu_D*
Probab=98.87 E-value=6.1e-09 Score=83.00 Aligned_cols=99 Identities=17% Similarity=0.208 Sum_probs=70.3
Q ss_pred cEEEeeCCCChhhHHHHHHHhC-CCeEeeeccCCCCCceeeeeeeeeccceeE-EEEccccCCCCeEEEEecccCchHHH
Q 030139 63 SVVAGIEARGFIFGPPIALAIG-AKFVPMRKPKKLPGEVISEEYSLEYGKDVM-EMHVGAVQAGERALIVDDLVATGGTL 140 (182)
Q Consensus 63 d~Iv~v~~~G~~~a~~la~~l~-vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~gk~VllVDDvitTG~Tl 140 (182)
-++|++.++|+.++..+.+.+. .++..+.-.+. .+.++..+ +.......+|++|+||||++.||+|+
T Consensus 104 l~~V~ILRaG~~m~~~l~~~ip~a~vg~I~~~Rd-----------~~t~~~~~~~~~lp~di~~r~VilvDdmlaTG~T~ 172 (243)
T 1bd3_D 104 ICGVSIVRAGESMESGLRAVCRGVRIGKILIQRD-----------ETTAEPKLIYEKLPADIRERWVMLLDPMCATAGSV 172 (243)
T ss_dssp EEEEEEETTTHHHHHHHHHHSTTCCEEEEEEEEC-----------SSSCCEEEEEEECCTTGGGSEEEEECSEESSCHHH
T ss_pred EEEEEEEcchHHHHHHHHHhCCcCeeeeEEEEEc-----------CCCCCeEEEeccCCcccCCCEEEEECCccccHHHH
Confidence 3788899999999999999885 23322211110 00111122 22223457899999999999999999
Q ss_pred HHHHHHHHhcCC--eEEEEEEEEecCCcccccccCC
Q 030139 141 SAAIRLLERVGV--HVVECACVIELPELKGRERLGE 174 (182)
Q Consensus 141 ~~~~~~L~~~ga--~~v~v~~l~~~~~~~~~~~l~~ 174 (182)
.++++.|++.|+ +.+.+++++..+ .+.+++.+
T Consensus 173 ~~ai~~L~~~G~~p~~I~~~~lvaap--~g~~~l~~ 206 (243)
T 1bd3_D 173 CKAIEVLLRLGVKEERIIFVNILAAP--QGIERVFK 206 (243)
T ss_dssp HHHHHHHHHHTCCGGGEEEEEEEECH--HHHHHHHH
T ss_pred HHHHHHHHHcCCCcceEEEEEEEeCH--HHHHHHHH
Confidence 999999999999 889999998765 56666553
No 56
>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} SCOP: c.61.1.1
Probab=98.69 E-value=2.8e-08 Score=77.88 Aligned_cols=97 Identities=16% Similarity=0.158 Sum_probs=68.6
Q ss_pred cEEEeeCCCChhhHHHHHHHhC-CCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCchHHHH
Q 030139 63 SVVAGIEARGFIFGPPIALAIG-AKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLS 141 (182)
Q Consensus 63 d~Iv~v~~~G~~~a~~la~~l~-vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG~Tl~ 141 (182)
-++|++.++|.+++..+.+.+. .++..+...+.. .. +....+...+ ...|+.|+||||++.||+|+.
T Consensus 79 i~~V~IlRaG~~m~~~l~~~ip~a~vg~i~~~Rd~-~t----------~p~~~~~~lP-~i~~~~VilvD~~laTG~T~~ 146 (217)
T 3dmp_A 79 LAIVPVLRAGVGMSDGLLELIPSARVGHIGVYRAD-DH----------RPVEYLVRLP-DLEDRIFILCDPMVATGYSAA 146 (217)
T ss_dssp EEEEEEETTTHHHHHHHHHHCTTSEECEEECSCCC-SS----------SCCCSEEECC-CCTTCEEEEECSEESSSHHHH
T ss_pred EEEEEecccchHHHHHHHHhCcCCceeEEEEEECC-CC----------CcEEEeecCC-CCCCCEEEEEcCcccccHHHH
Confidence 4788899999999999999884 343332221110 00 0001111224 578999999999999999999
Q ss_pred HHHHHHHhcCC--eEEEEEEEEecCCcccccccC
Q 030139 142 AAIRLLERVGV--HVVECACVIELPELKGRERLG 173 (182)
Q Consensus 142 ~~~~~L~~~ga--~~v~v~~l~~~~~~~~~~~l~ 173 (182)
++++.|++.|+ +.+.++|++..+ .|.+++.
T Consensus 147 ~ai~~L~~~G~pe~~I~~~~~vaa~--egl~~l~ 178 (217)
T 3dmp_A 147 HAIDVLKRRGVPGERLMFLALVAAP--EGVQVFQ 178 (217)
T ss_dssp HHHHHHHTTTCCGGGEEEECSEECH--HHHHHHH
T ss_pred HHHHHHHHcCCCcCeEEEEEEEeCH--HHHHHHH
Confidence 99999999999 888888887754 5666554
No 57
>1xtt_A Probable uracil phosphoribosyltransferase; tetramer, type 1 phosphoribosyltransferase, UMP complex; HET: U5P; 1.80A {Sulfolobus solfataricus} SCOP: c.61.1.1 PDB: 1vst_A* 1xtu_A* 1xtv_A* 3g6w_A*
Probab=98.50 E-value=3.7e-07 Score=71.47 Aligned_cols=100 Identities=12% Similarity=0.055 Sum_probs=66.8
Q ss_pred cEEEeeCCCChhhHHHHHHHhC-CCeEee---eccCCCCCceeeeeeeeeccceeE-EEEccccCCCC--eEEEEecccC
Q 030139 63 SVVAGIEARGFIFGPPIALAIG-AKFVPM---RKPKKLPGEVISEEYSLEYGKDVM-EMHVGAVQAGE--RALIVDDLVA 135 (182)
Q Consensus 63 d~Iv~v~~~G~~~a~~la~~l~-vp~~~~---rk~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~gk--~VllVDDvit 135 (182)
-++|++.++|.+++..+.+.+. .+...+ |...+.... . ...+... +.+.. ...++ +|+||||++.
T Consensus 73 i~iV~IlRaG~~m~~gl~~~lp~a~vg~I~~~Rd~~t~~~~----~---~~~~p~~~y~klP-~i~~~~~~VilvDp~la 144 (216)
T 1xtt_A 73 IVIINILRAAVPLVEGLLKAFPKARQGVIGASRVEVDGKEV----P---KDMDVYIYYKKIP-DIRAKVDNVIIADPMIA 144 (216)
T ss_dssp EEEEEEETTTHHHHHHHHHHCTTCEEEEEEEEECCCCCSSC----C---SCCCEEEEEEECC-CCCTTTCEEEEECSEES
T ss_pred EEEEeecCCcHHHHHHHHHHcccCccceEEEEECCCccccc----c---cccCceEeeccCC-CccCCcceEEEEcCCcc
Confidence 4788899999999999999874 233221 111110000 0 0001111 22223 57788 9999999999
Q ss_pred chHHHHHHHHHHHhcCC-eEEEEEEEEecCCcccccccC
Q 030139 136 TGGTLSAAIRLLERVGV-HVVECACVIELPELKGRERLG 173 (182)
Q Consensus 136 TG~Tl~~~~~~L~~~ga-~~v~v~~l~~~~~~~~~~~l~ 173 (182)
||+|+.++++.|++ |+ +.+.+++++.-+ .|.+++.
T Consensus 145 TG~T~~~ai~~L~~-G~p~~I~~~~~vaa~--~gl~~l~ 180 (216)
T 1xtt_A 145 TASTMLKVLEEVVK-ANPKRIYIVSIISSE--YGVNKIL 180 (216)
T ss_dssp SSHHHHHHHHHHGG-GCCSEEEEECSEEEH--HHHHHHH
T ss_pred chHHHHHHHHHHHh-CCCCeEEEEEEecCH--HHHHHHH
Confidence 99999999999999 99 888888887654 5666654
No 58
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=87.42 E-value=4.8 Score=32.77 Aligned_cols=75 Identities=9% Similarity=0.120 Sum_probs=48.0
Q ss_pred CCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCch----HHHHHHH
Q 030139 69 EARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATG----GTLSAAI 144 (182)
Q Consensus 69 ~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG----~Tl~~~~ 144 (182)
-++.-.+|..+|+.||+|+..+...+... |+. .+.....++|++|+||-.....- --+.-++
T Consensus 13 g~~~~~La~~ia~~lg~~l~~~~~~~F~d------------GE~--~v~i~esvrg~dV~iiqs~~~p~nd~lmeLl~~i 78 (319)
T 3dah_A 13 GNANPALAQEVVKILGIPLGKAMVSRFSD------------GEI--QVEIQENVRGKDVFVLQSTCAPTNDNLMELMIMV 78 (319)
T ss_dssp CSSCHHHHHHHHHHHTSCCCCEEEEECTT------------SCE--EEEECSCCBTCEEEEECCCCSSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhCCceeeeEEEECCC------------CCE--EEEECCCcCCCeEEEEccCCCCCcHHHHHHHHHH
Confidence 34456899999999999886543222111 222 22223458899999997654321 1255667
Q ss_pred HHHHhcCCeEEEE
Q 030139 145 RLLERVGVHVVEC 157 (182)
Q Consensus 145 ~~L~~~ga~~v~v 157 (182)
++++.++|+.+.+
T Consensus 79 dA~k~asA~rIt~ 91 (319)
T 3dah_A 79 DALKRASAGRITA 91 (319)
T ss_dssp HHHHHTTBSEEEE
T ss_pred HHHHHcCCcEEEE
Confidence 8888999987654
No 59
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=84.98 E-value=5 Score=31.93 Aligned_cols=73 Identities=10% Similarity=0.083 Sum_probs=46.8
Q ss_pred CChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCc-hH--HHHHHHHHH
Q 030139 71 RGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVAT-GG--TLSAAIRLL 147 (182)
Q Consensus 71 ~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitT-G~--Tl~~~~~~L 147 (182)
+.-.+|..+|+.||+|+..+...+... |+ .++.....++|++|+|+-..... -. -+.-+++++
T Consensus 8 ~~~~la~~ia~~l~~~l~~~~~~~F~d------------GE--~~v~i~~~vrg~dv~iiqs~~~pn~~lmell~~~~a~ 73 (284)
T 1u9y_A 8 QSQNLAFKVAKLLNTKLTRVEYKRFPD------------NE--IYVRIVDEINDDEAVIINTQKNQNDAIVETILLCDAL 73 (284)
T ss_dssp TCHHHHHHHHHHTTCCEECEEEEECTT------------CC--EEEEECSCCCSSEEEEECCCSSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCeeeeeEEEECCC------------CC--EEEEeCCCCCCCEEEEEeCCCCCcHHHHHHHHHHHHH
Confidence 345899999999999987654332211 22 22222345789999999876542 12 244556788
Q ss_pred HhcCCeEEEE
Q 030139 148 ERVGVHVVEC 157 (182)
Q Consensus 148 ~~~ga~~v~v 157 (182)
+.++|+.+.+
T Consensus 74 ~~~~a~~i~~ 83 (284)
T 1u9y_A 74 RDEGVKKITL 83 (284)
T ss_dssp HTTTCCEEEE
T ss_pred HHcCCceEEE
Confidence 8899987554
No 60
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=84.03 E-value=9.9 Score=30.99 Aligned_cols=74 Identities=16% Similarity=0.110 Sum_probs=46.0
Q ss_pred CCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCc--hH--HHHHHHH
Q 030139 70 ARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVAT--GG--TLSAAIR 145 (182)
Q Consensus 70 ~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitT--G~--Tl~~~~~ 145 (182)
++.-.+|..+|+.||+|+..+...+... |+. ++.....++|++|+||-..... -. -+.-+++
T Consensus 10 ~~~~~La~~ia~~lg~~l~~~~~~~F~d------------GE~--~v~i~esvrg~dV~iiqs~~~p~nd~lmeLl~~id 75 (326)
T 3s5j_B 10 SSHQDLSQKIADRLGLELGKVVTKKFSN------------QET--CVEIGESVRGEDVYIVQSGCGEINDNLMELLIMIN 75 (326)
T ss_dssp SSCCHHHHHHHHHTTCCCCCEEEEECTT------------SCE--EEEECSCCTTCEEEEECCCCSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCceeeeEEeECCC------------CCE--EEEECCCcCCCcEEEEecCCCCccHHHHHHHHHHH
Confidence 3445899999999999886543222111 222 2222445889999999764332 11 2335567
Q ss_pred HHHhcCCeEEEE
Q 030139 146 LLERVGVHVVEC 157 (182)
Q Consensus 146 ~L~~~ga~~v~v 157 (182)
+++.++|+.+.+
T Consensus 76 A~k~asA~rIt~ 87 (326)
T 3s5j_B 76 ACKIASASRVTA 87 (326)
T ss_dssp HHHHTTCSEEEE
T ss_pred HHHhcCCcEEEE
Confidence 788899987654
No 61
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=78.21 E-value=23 Score=28.54 Aligned_cols=81 Identities=11% Similarity=0.098 Sum_probs=49.2
Q ss_pred EEEeeCCCChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCc--hH--H
Q 030139 64 VVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVAT--GG--T 139 (182)
Q Consensus 64 ~Iv~v~~~G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitT--G~--T 139 (182)
+.+-.-++.-.+|..+|+.||+|+..+...+... | +.++.....++|++|+||-..-.. -. -
T Consensus 10 ~~i~~~~~~~~la~~ia~~lg~~l~~~~~~~F~d------------G--E~~v~i~e~vrg~dv~iiqs~~~~~nd~lme 75 (317)
T 1dku_A 10 LKIFSLNSNPELAKEIADIVGVQLGKCSVTRFSD------------G--EVQINIEESIRGCDCYIIQSTSDPVNEHIME 75 (317)
T ss_dssp EEEEECSSCHHHHHHHHHHHTCCCCCEEEEECTT------------S--CEEEEECSCCTTCEEEEECCCCSSHHHHHHH
T ss_pred eEEEECCCCHHHHHHHHHHhCCeeEeeEEEECCC------------C--CEEEEecCCCCCCEEEEEcCCCCCCcHHHHH
Confidence 3333345556899999999999886553322111 2 222222445789999998775432 11 2
Q ss_pred HHHHHHHHHhcCCeEEEEE
Q 030139 140 LSAAIRLLERVGVHVVECA 158 (182)
Q Consensus 140 l~~~~~~L~~~ga~~v~v~ 158 (182)
+.-+++.++..+++.+.++
T Consensus 76 ll~~~~a~~~~~a~~i~av 94 (317)
T 1dku_A 76 LLIMVDALKRASAKTINIV 94 (317)
T ss_dssp HHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHhhccCcceEEEE
Confidence 3445667778888876543
No 62
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=70.45 E-value=25 Score=29.07 Aligned_cols=74 Identities=8% Similarity=0.050 Sum_probs=45.9
Q ss_pred CCChhhHHH---HHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCc--hH--HHHH
Q 030139 70 ARGFIFGPP---IALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVAT--GG--TLSA 142 (182)
Q Consensus 70 ~~G~~~a~~---la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitT--G~--Tl~~ 142 (182)
++.-.+|.. +|+.||+|+..+...+... |+. .+..+..++|++|.||-..... .. -+.-
T Consensus 36 ~~~~~la~~~~~ia~~lg~~l~~~~~~~F~d------------GE~--~v~i~esvrg~dV~iiqs~~~~~nd~lmeLl~ 101 (379)
T 2ji4_A 36 NSNSSCMELSKKIAERLGVEMGKVQVYQEPN------------RET--RVQIQESVRGKDVFIIQTVSKDVNTTIMELLI 101 (379)
T ss_dssp CCSGGGGHHHHHHHHHHTCCCCCEEEEECTT------------SCE--EEEECSCCTTCEEEEECCCCSCHHHHHHHHHH
T ss_pred CCCHHHHHhHHHHHHHhCCceEeeEEEECCC------------CCE--EEEeCCCcCCCEEEEEeCCCCCccHHHHHHHH
Confidence 444578888 9999999876543222111 222 2222345889999999886531 22 2344
Q ss_pred HHHHHHhcCCeEEEE
Q 030139 143 AIRLLERVGVHVVEC 157 (182)
Q Consensus 143 ~~~~L~~~ga~~v~v 157 (182)
++++++.++|+.+.+
T Consensus 102 ~idA~k~asA~rit~ 116 (379)
T 2ji4_A 102 MVYACKTSCAKSIIG 116 (379)
T ss_dssp HHHHHHHTTCSEEEE
T ss_pred HHHHHHhcCCceEEE
Confidence 566788899987654
No 63
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=66.29 E-value=17 Score=29.00 Aligned_cols=70 Identities=9% Similarity=-0.016 Sum_probs=42.1
Q ss_pred ChhhHHHHHHHhCCCeEeeeccCCCCCceeeeeeeeeccceeEEEEccccCCCCeEEEEecccCc-hHH---HHHHHHHH
Q 030139 72 GFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVAT-GGT---LSAAIRLL 147 (182)
Q Consensus 72 G~~~a~~la~~l~vp~~~~rk~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitT-G~T---l~~~~~~L 147 (182)
.-.+|..+|+.||+|+..+...+... |+ ..+..+.. |++|.||--.... -.. +.-+++++
T Consensus 9 ~~~la~~ia~~lg~~l~~~~~~~F~d------------GE--~~v~i~e~--g~dV~iiqs~~~p~nd~lmeLl~~ida~ 72 (286)
T 3lrt_A 9 SLKLAARIAEELKTEPVMPDERRFPD------------GE--LYLRYDED--LTGHNIFIIGNTHSDAEVMEMILTLSAI 72 (286)
T ss_dssp GHHHHHHHHHHTTSCEECCEEEECTT------------SC--EEEECCSC--CTTSEEEEECCCCSHHHHHHHHHHHHHG
T ss_pred CHHHHHHHHHHhCCCeeeeEEEECCC------------CC--EEEEEcCC--CCcEEEEEeCCCCCcHHHHHHHHHHHHH
Confidence 34789999999999986543222111 22 22222222 8889988755432 111 44567788
Q ss_pred HhcCCeEEEE
Q 030139 148 ERVGVHVVEC 157 (182)
Q Consensus 148 ~~~ga~~v~v 157 (182)
+.++|+.+.+
T Consensus 73 k~~~A~~it~ 82 (286)
T 3lrt_A 73 QDYRTKSVNI 82 (286)
T ss_dssp GGSCCSEEEE
T ss_pred HHcCCCEEEE
Confidence 8999986644
No 64
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=56.64 E-value=15 Score=25.47 Aligned_cols=31 Identities=26% Similarity=0.382 Sum_probs=20.1
Q ss_pred CCCCeEEEEecccCchHHHHHHHHHHHhcCCeEE
Q 030139 122 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVV 155 (182)
Q Consensus 122 ~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v 155 (182)
.++-|||||||--+.-..+ .+.|++.|...+
T Consensus 10 ~k~~rILiVDD~~~~r~~l---~~~L~~~G~~~v 40 (134)
T 3to5_A 10 NKNMKILIVDDFSTMRRIV---KNLLRDLGFNNT 40 (134)
T ss_dssp CTTCCEEEECSCHHHHHHH---HHHHHHTTCCCE
T ss_pred CCCCEEEEEeCCHHHHHHH---HHHHHHcCCcEE
Confidence 4455899999966554444 445667776543
No 65
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=47.79 E-value=38 Score=21.72 Aligned_cols=27 Identities=22% Similarity=0.238 Sum_probs=15.7
Q ss_pred CCeEEEEecccCchHHHHHHHHHHHhcCCe
Q 030139 124 GERALIVDDLVATGGTLSAAIRLLERVGVH 153 (182)
Q Consensus 124 gk~VllVDDvitTG~Tl~~~~~~L~~~ga~ 153 (182)
+++|+||||=-.... .....|++.|..
T Consensus 2 ~~~ilivdd~~~~~~---~l~~~L~~~g~~ 28 (120)
T 3f6p_A 2 DKKILVVDDEKPIAD---ILEFNLRKEGYE 28 (120)
T ss_dssp CCEEEEECSCHHHHH---HHHHHHHHTTCE
T ss_pred CCeEEEEECCHHHHH---HHHHHHHhCCEE
Confidence 357888888544333 334455566654
No 66
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=47.78 E-value=26 Score=22.25 Aligned_cols=34 Identities=12% Similarity=0.062 Sum_probs=30.5
Q ss_pred ccCCCCeEEEEecccCchHHHHHHHHHHHhcCCe
Q 030139 120 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVH 153 (182)
Q Consensus 120 ~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~ 153 (182)
.+..|.+++=|+..-.+|.|..+++++|++.|-.
T Consensus 40 Gl~~GD~Il~VNG~~v~~~~~~evv~llr~~g~~ 73 (82)
T 1r6j_A 40 GLLTEHNICEINGQNVIGLKDSQIADILSTSGTV 73 (82)
T ss_dssp TCCSSEEEEEETTEECTTCCHHHHHHHHHHSCSE
T ss_pred CCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCE
Confidence 3578999999999999999999999999977755
No 67
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=45.25 E-value=44 Score=21.53 Aligned_cols=26 Identities=23% Similarity=0.293 Sum_probs=15.1
Q ss_pred CeEEEEecccCchHHHHHHHHHHHhcCCe
Q 030139 125 ERALIVDDLVATGGTLSAAIRLLERVGVH 153 (182)
Q Consensus 125 k~VllVDDvitTG~Tl~~~~~~L~~~ga~ 153 (182)
++||||||--... ......|++.|..
T Consensus 3 ~~ILivdd~~~~~---~~l~~~l~~~g~~ 28 (122)
T 3gl9_A 3 KKVLLVDDSAVLR---KIVSFNLKKEGYE 28 (122)
T ss_dssp CEEEEECSCHHHH---HHHHHHHHHTTCE
T ss_pred ceEEEEeCCHHHH---HHHHHHHHHCCcE
Confidence 5788888854333 3334455566654
No 68
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=44.16 E-value=48 Score=21.34 Aligned_cols=30 Identities=20% Similarity=0.244 Sum_probs=19.0
Q ss_pred CCCCeEEEEecccCchHHHHHHHHHHHhcCCeE
Q 030139 122 QAGERALIVDDLVATGGTLSAAIRLLERVGVHV 154 (182)
Q Consensus 122 ~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~ 154 (182)
..+++|+||||--..... ..+.|.+.|..+
T Consensus 5 ~~~~~ilivdd~~~~~~~---l~~~L~~~g~~v 34 (130)
T 3eod_A 5 LVGKQILIVEDEQVFRSL---LDSWFSSLGATT 34 (130)
T ss_dssp TTTCEEEEECSCHHHHHH---HHHHHHHTTCEE
T ss_pred CCCCeEEEEeCCHHHHHH---HHHHHHhCCceE
Confidence 457789999986554444 445566667653
No 69
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=42.33 E-value=47 Score=27.16 Aligned_cols=48 Identities=13% Similarity=-0.026 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEee
Q 030139 43 TKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPM 90 (182)
Q Consensus 43 ~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~ 90 (182)
.+.+..+...+.+.+...++|+|+........++...|..+++|+..+
T Consensus 76 ~~~~~~~~~~l~~~l~~~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~ 123 (385)
T 4hwg_A 76 AKSIGLVIEKVDEVLEKEKPDAVLFYGDTNSCLSAIAAKRRKIPIFHM 123 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHCCSEEEEESCSGGGGGHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEECCchHHHHHHHHHHhCCCEEEE
Confidence 344444445555566667899999988666666666677789997654
No 70
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=40.08 E-value=53 Score=21.62 Aligned_cols=28 Identities=25% Similarity=0.366 Sum_probs=15.5
Q ss_pred CCCeEEEEecccCchHHHHHHHHHHHhcCCe
Q 030139 123 AGERALIVDDLVATGGTLSAAIRLLERVGVH 153 (182)
Q Consensus 123 ~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~ 153 (182)
++.+||||||--..... ..+.|.+.|..
T Consensus 4 ~~~~ilivdd~~~~~~~---l~~~L~~~g~~ 31 (140)
T 3h5i_A 4 KDKKILIVEDSKFQAKT---IANILNKYGYT 31 (140)
T ss_dssp --CEEEEECSCHHHHHH---HHHHHHHTTCE
T ss_pred CCcEEEEEeCCHHHHHH---HHHHHHHcCCE
Confidence 35688999885544433 34445555644
No 71
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=40.08 E-value=65 Score=25.74 Aligned_cols=42 Identities=17% Similarity=0.094 Sum_probs=27.9
Q ss_pred HHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEeee
Q 030139 49 TIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMR 91 (182)
Q Consensus 49 ~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~r 91 (182)
....+.+.+.++++|+|+. +..-...+..+|+.+|+|++...
T Consensus 106 ~~~~l~~~l~~~~PDlVi~-d~~~~~~~~~aA~~~giP~v~~~ 147 (415)
T 3rsc_A 106 VLRATAEALDGDVPDLVLY-DDFPFIAGQLLAARWRRPAVRLS 147 (415)
T ss_dssp HHHHHHHHHSSSCCSEEEE-ESTTHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHhccCCCEEEE-CchhhhHHHHHHHHhCCCEEEEE
Confidence 3344555666788999994 41223446677889999987654
No 72
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=39.39 E-value=69 Score=20.28 Aligned_cols=29 Identities=28% Similarity=0.456 Sum_probs=24.9
Q ss_pred cCCCCeEEEEecccCchHHHHHHHHHHHhcCC
Q 030139 121 VQAGERALIVDDLVATGGTLSAAIRLLERVGV 152 (182)
Q Consensus 121 ~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga 152 (182)
+.+++.|+++. .+|..-..+...|++.|.
T Consensus 53 l~~~~~ivvyC---~~g~rs~~a~~~L~~~G~ 81 (100)
T 3foj_A 53 FNDNETYYIIC---KAGGRSAQVVQYLEQNGV 81 (100)
T ss_dssp SCTTSEEEEEC---SSSHHHHHHHHHHHTTTC
T ss_pred CCCCCcEEEEc---CCCchHHHHHHHHHHCCC
Confidence 45678899987 688888999999999998
No 73
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=39.22 E-value=74 Score=25.06 Aligned_cols=41 Identities=20% Similarity=0.081 Sum_probs=28.1
Q ss_pred HHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEeee
Q 030139 50 IDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMR 91 (182)
Q Consensus 50 ~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~r 91 (182)
...+.+.+.++++|+|+.- ......+..+|+.+|+|.+...
T Consensus 91 ~~~l~~~l~~~~pD~Vi~d-~~~~~~~~~aA~~~giP~v~~~ 131 (402)
T 3ia7_A 91 LRAAEEALGDNPPDLVVYD-VFPFIAGRLLAARWDRPAVRLT 131 (402)
T ss_dssp HHHHHHHHTTCCCSEEEEE-STTHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHhccCCCEEEEC-chHHHHHHHHHHhhCCCEEEEe
Confidence 3445556666889999973 1233456778899999987653
No 74
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=37.90 E-value=54 Score=23.68 Aligned_cols=28 Identities=36% Similarity=0.527 Sum_probs=17.9
Q ss_pred CCCCeEEEEecccCchHHHHHHHHHHHhcCC
Q 030139 122 QAGERALIVDDLVATGGTLSAAIRLLERVGV 152 (182)
Q Consensus 122 ~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga 152 (182)
..+.+||||||=-..... +.+.|++.|.
T Consensus 59 ~~~~~ILiVdDd~~~~~~---l~~~L~~~g~ 86 (206)
T 3mm4_A 59 LRGKRVLVVDDNFISRKV---ATGKLKKMGV 86 (206)
T ss_dssp TTTCEEEEECSCHHHHHH---HHHHHHHTTC
T ss_pred cCCCEEEEEeCCHHHHHH---HHHHHHHcCC
Confidence 567899999996544333 3445555565
No 75
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=37.84 E-value=38 Score=21.95 Aligned_cols=32 Identities=19% Similarity=0.257 Sum_probs=25.9
Q ss_pred CCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEE
Q 030139 122 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVE 156 (182)
Q Consensus 122 ~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~ 156 (182)
.+++.|+++++ +|.....+...|++.|-..|.
T Consensus 50 ~~~~~ivvyc~---~g~rs~~a~~~L~~~G~~~v~ 81 (106)
T 3hix_A 50 EKSRDIYVYGA---GDEQTSQAVNLLRSAGFEHVS 81 (106)
T ss_dssp CTTSCEEEECS---SHHHHHHHHHHHHHTTCSCEE
T ss_pred CCCCeEEEEEC---CCChHHHHHHHHHHcCCcCEE
Confidence 56778998875 788888999999999987543
No 76
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=37.03 E-value=65 Score=20.68 Aligned_cols=28 Identities=32% Similarity=0.439 Sum_probs=14.6
Q ss_pred CCCeEEEEecccCchHHHHHHHHHHHhcCCe
Q 030139 123 AGERALIVDDLVATGGTLSAAIRLLERVGVH 153 (182)
Q Consensus 123 ~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~ 153 (182)
.+.+||||||--.....+. +.|.+.|..
T Consensus 5 ~~~~ilivdd~~~~~~~l~---~~L~~~g~~ 32 (132)
T 3lte_A 5 QSKRILVVDDDQAMAAAIE---RVLKRDHWQ 32 (132)
T ss_dssp --CEEEEECSCHHHHHHHH---HHHHHTTCE
T ss_pred CCccEEEEECCHHHHHHHH---HHHHHCCcE
Confidence 3567888887544443333 444455543
No 77
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=35.70 E-value=43 Score=23.14 Aligned_cols=33 Identities=18% Similarity=0.267 Sum_probs=26.7
Q ss_pred cCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEE
Q 030139 121 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVE 156 (182)
Q Consensus 121 ~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~ 156 (182)
+.+++.|+++++ +|.....+...|++.|-..+.
T Consensus 53 l~~~~~ivvyC~---~g~rs~~aa~~L~~~G~~~v~ 85 (141)
T 3ilm_A 53 LEKSRDIYVYGA---GDEQTSQAVNLLRSAGFEHVS 85 (141)
T ss_dssp SCTTSEEEEECS---SHHHHHHHHHHHHHTTCCSEE
T ss_pred CCCCCeEEEEEC---CChHHHHHHHHHHHcCCCCEE
Confidence 356788999876 788888999999999987543
No 78
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=35.67 E-value=38 Score=23.02 Aligned_cols=39 Identities=21% Similarity=0.184 Sum_probs=33.4
Q ss_pred ccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEE
Q 030139 120 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECA 158 (182)
Q Consensus 120 ~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~ 158 (182)
.+..|..|+=|++.-.++.|..+++++|+..+...+.+.
T Consensus 75 gL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l~ 113 (130)
T 1i16_A 75 TVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDGPVTIV 113 (130)
T ss_dssp CCCTTCCEEECSSCBGGGSCHHHHHHHHHTSCSSEEEEE
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEE
Confidence 567899999999999999999999999999876655543
No 79
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=34.80 E-value=96 Score=24.91 Aligned_cols=40 Identities=15% Similarity=0.158 Sum_probs=28.0
Q ss_pred HHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEeee
Q 030139 50 IDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMR 91 (182)
Q Consensus 50 ~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~r 91 (182)
...+.+.+.+.++|+||+-.. +..+..+|+.+|+|.+.+.
T Consensus 98 ~~~l~~~l~~~~pD~VI~d~~--~~~~~~~A~~lgIP~v~~~ 137 (424)
T 2iya_A 98 LPQLEDAYADDRPDLIVYDIA--SWPAPVLGRKWDIPFVQLS 137 (424)
T ss_dssp HHHHHHHTTTSCCSEEEEETT--CTHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHhccCCCEEEEcCc--ccHHHHHHHhcCCCEEEEe
Confidence 334444555578999998653 3467888999999987653
No 80
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=34.53 E-value=68 Score=19.56 Aligned_cols=33 Identities=18% Similarity=0.252 Sum_probs=26.5
Q ss_pred CCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEE
Q 030139 122 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVEC 157 (182)
Q Consensus 122 ~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v 157 (182)
.+++.|+++.+ +|.....+...|++.|-..+..
T Consensus 39 ~~~~~ivv~C~---~g~rs~~aa~~L~~~G~~~v~~ 71 (85)
T 2jtq_A 39 DKNDTVKVYCN---AGRQSGQAKEILSEMGYTHVEN 71 (85)
T ss_dssp CTTSEEEEEES---SSHHHHHHHHHHHHTTCSSEEE
T ss_pred CCCCcEEEEcC---CCchHHHHHHHHHHcCCCCEEe
Confidence 56788999885 6888888999999999875543
No 81
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=34.07 E-value=46 Score=21.85 Aligned_cols=37 Identities=14% Similarity=0.238 Sum_probs=31.9
Q ss_pred cCCCCeEEEEecccCchHHHHHHHHHHHhcC---CeEEEE
Q 030139 121 VQAGERALIVDDLVATGGTLSAAIRLLERVG---VHVVEC 157 (182)
Q Consensus 121 ~~~gk~VllVDDvitTG~Tl~~~~~~L~~~g---a~~v~v 157 (182)
+..|.+|+=|++.-.++.|..+++++|++.+ ...+.+
T Consensus 60 l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~~r~~~~~~l 99 (109)
T 1wi4_A 60 LKPGDQLVSINKESMIGVSFEEAKSIITRAKLRSESPWEI 99 (109)
T ss_dssp CCTTCBEEEETTSCCTTCCHHHHHHHHHHSCCSSSSCEEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHccccCCCceEEE
Confidence 6889999999999999999999999999987 444444
No 82
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=33.54 E-value=66 Score=20.82 Aligned_cols=29 Identities=21% Similarity=0.468 Sum_probs=24.8
Q ss_pred cCCCCeEEEEecccCchHHHHHHHHHHHhcCC
Q 030139 121 VQAGERALIVDDLVATGGTLSAAIRLLERVGV 152 (182)
Q Consensus 121 ~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga 152 (182)
+.+++.|+++. .+|..-..+...|++.|.
T Consensus 52 l~~~~~ivvyC---~~G~rs~~aa~~L~~~G~ 80 (108)
T 3gk5_A 52 LERDKKYAVIC---AHGNRSAAAVEFLSQLGL 80 (108)
T ss_dssp SCTTSCEEEEC---SSSHHHHHHHHHHHTTTC
T ss_pred CCCCCeEEEEc---CCCcHHHHHHHHHHHcCC
Confidence 45678899988 688888899999999998
No 83
>1o63_A ATP phosphoribosyltransferase; structural genomics; 2.00A {Thermotoga maritima} SCOP: c.94.1.1 PDB: 1o64_A 1usy_E* 1usy_H*
Probab=33.51 E-value=13 Score=28.61 Aligned_cols=11 Identities=45% Similarity=0.586 Sum_probs=9.5
Q ss_pred ecccCchHHHH
Q 030139 131 DDLVATGGTLS 141 (182)
Q Consensus 131 DDvitTG~Tl~ 141 (182)
=|+++||+||+
T Consensus 147 vDivsTG~TLr 157 (219)
T 1o63_A 147 VDITETGRTLK 157 (219)
T ss_dssp EEEESSSHHHH
T ss_pred EEeeccHHHHH
Confidence 38999999987
No 84
>1ve4_A ATP phosphoribosyltransferase; riken structural genomics/proteomics initiative structural genomics; 1.20A {Thermus thermophilus} SCOP: c.94.1.1
Probab=32.98 E-value=13 Score=28.23 Aligned_cols=18 Identities=50% Similarity=0.678 Sum_probs=13.9
Q ss_pred cccCchHHHHHHHHHHHhcCCeEEE
Q 030139 132 DLVATGGTLSAAIRLLERVGVHVVE 156 (182)
Q Consensus 132 DvitTG~Tl~~~~~~L~~~ga~~v~ 156 (182)
|+++||+||+ +.|-+++.
T Consensus 153 DivsTG~TLr-------aNgL~~ie 170 (206)
T 1ve4_A 153 DVVQTGATLR-------AAGLVEVE 170 (206)
T ss_dssp EEESSSHHHH-------HTTCEEEE
T ss_pred EeccCHHHHH-------HCCCEEeE
Confidence 7999999986 56666654
No 85
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=32.87 E-value=92 Score=20.10 Aligned_cols=37 Identities=22% Similarity=0.382 Sum_probs=31.8
Q ss_pred cCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEE
Q 030139 121 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVEC 157 (182)
Q Consensus 121 ~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v 157 (182)
+..|..|+=|++.-.++.|...+.+.++..+...+.+
T Consensus 63 L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l 99 (108)
T 2d92_A 63 LLPGDRLVSVNEYCLDNTSLAEAVEILKAVPPGLVHL 99 (108)
T ss_dssp CCTTCEEEEESSCBCTTCCHHHHHHHHHHSCSEEEEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEE
Confidence 7889999999999999999999999999976555444
No 86
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=32.82 E-value=68 Score=21.02 Aligned_cols=42 Identities=10% Similarity=0.054 Sum_probs=33.8
Q ss_pred ccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEEEEE
Q 030139 120 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVI 161 (182)
Q Consensus 120 ~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~~l~ 161 (182)
.+..|+.++=|++.-..|-|-.+++++|++........+.++
T Consensus 46 ~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g~~~~L~lv 87 (95)
T 3gge_A 46 TICVGDHIESINGENIVGWRHYDVAKKLKELKKEELFTMKLI 87 (95)
T ss_dssp TCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCCCEEEEEEE
Confidence 567899999999999999999999999999755333333443
No 87
>1dcf_A ETR1 protein; beta-alpha five sandwich, transferase; 2.50A {Arabidopsis thaliana} SCOP: c.23.1.2
Probab=32.56 E-value=93 Score=20.09 Aligned_cols=29 Identities=21% Similarity=0.304 Sum_probs=18.2
Q ss_pred CCCCeEEEEecccCchHHHHHHHHHHHhcCCe
Q 030139 122 QAGERALIVDDLVATGGTLSAAIRLLERVGVH 153 (182)
Q Consensus 122 ~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~ 153 (182)
.++.+||||||--.....+.. .|...|..
T Consensus 5 ~~~~~ILivdd~~~~~~~l~~---~L~~~g~~ 33 (136)
T 1dcf_A 5 FTGLKVLVMDENGVSRMVTKG---LLVHLGCE 33 (136)
T ss_dssp CTTCEEEEECSCHHHHHHHHH---HHHHTTCE
T ss_pred cCCCeEEEEeCCHHHHHHHHH---HHHHcCCe
Confidence 356789999997655544443 44455654
No 88
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=32.55 E-value=72 Score=24.90 Aligned_cols=34 Identities=32% Similarity=0.477 Sum_probs=28.5
Q ss_pred cCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEEE
Q 030139 121 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECA 158 (182)
Q Consensus 121 ~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v~ 158 (182)
..+|++++| +-+|++.++++-.|.+.|+..+.++
T Consensus 122 ~~~~~~~li----lGaGGaarai~~aL~~~g~~~i~i~ 155 (269)
T 3tum_A 122 EPAGKRALV----IGCGGVGSAIAYALAEAGIASITLC 155 (269)
T ss_dssp CCTTCEEEE----ECCSHHHHHHHHHHHHTTCSEEEEE
T ss_pred CcccCeEEE----EecHHHHHHHHHHHHHhCCCeEEEe
Confidence 367899986 5899999999999999998876543
No 89
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=32.52 E-value=50 Score=26.95 Aligned_cols=32 Identities=13% Similarity=0.009 Sum_probs=24.3
Q ss_pred hcCCCccEEEeeCCCChhhHHHHHHHhCCCeEee
Q 030139 57 YKDKNISVVAGIEARGFIFGPPIALAIGAKFVPM 90 (182)
Q Consensus 57 ~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~ 90 (182)
++++++|+|++-. ++..+..+|+.+|+|++..
T Consensus 140 ~~~~~pDlVv~d~--~~~~~~~aA~~lgiP~v~~ 171 (441)
T 2yjn_A 140 CRKWRPDLVIWEP--LTFAAPIAAAVTGTPHARL 171 (441)
T ss_dssp HHHHCCSEEEECT--TCTHHHHHHHHHTCCEEEE
T ss_pred HHhcCCCEEEecC--cchhHHHHHHHcCCCEEEE
Confidence 3446899999765 3467788999999998664
No 90
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=31.87 E-value=69 Score=19.98 Aligned_cols=36 Identities=11% Similarity=0.200 Sum_probs=31.3
Q ss_pred cCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEE
Q 030139 121 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVEC 157 (182)
Q Consensus 121 ~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v 157 (182)
+..|..++=|++.-.+|.|...+.++|++.+. .+.+
T Consensus 47 L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~-~v~l 82 (93)
T 3o46_A 47 IHVGDELREVNGIPVEDKRPEEIIQILAQSQG-AITF 82 (93)
T ss_dssp CCTTCEEEEETTEESTTSCHHHHHHHHHHCCE-EEEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHhCCC-eEEE
Confidence 68899999999999999999999999999874 4443
No 91
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=31.81 E-value=90 Score=19.11 Aligned_cols=11 Identities=9% Similarity=0.223 Sum_probs=6.5
Q ss_pred CeEEEEecccC
Q 030139 125 ERALIVDDLVA 135 (182)
Q Consensus 125 k~VllVDDvit 135 (182)
++|+||||=-.
T Consensus 2 ~~iliv~~~~~ 12 (119)
T 2j48_A 2 GHILLLEEEDE 12 (119)
T ss_dssp CEEEEECCCHH
T ss_pred CEEEEEeCCHH
Confidence 46677766433
No 92
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=31.77 E-value=1.2e+02 Score=24.24 Aligned_cols=40 Identities=15% Similarity=0.115 Sum_probs=27.8
Q ss_pred HHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEeee
Q 030139 50 IDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMR 91 (182)
Q Consensus 50 ~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~r 91 (182)
...+.+.+.+.++|+|++-.. + ..+..+|+.+|+|.+...
T Consensus 93 ~~~l~~~l~~~~pD~Vi~d~~-~-~~~~~~A~~~giP~v~~~ 132 (430)
T 2iyf_A 93 LPQLADAYADDIPDLVLHDIT-S-YPARVLARRWGVPAVSLS 132 (430)
T ss_dssp HHHHHHHHTTSCCSEEEEETT-C-HHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHhhccCCCEEEECCc-c-HHHHHHHHHcCCCEEEEe
Confidence 344555566678999997543 3 467788999999986653
No 93
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=31.70 E-value=84 Score=21.08 Aligned_cols=28 Identities=25% Similarity=0.339 Sum_probs=15.6
Q ss_pred CCCeEEEEecccCchHHHHHHHHHHHhcCCe
Q 030139 123 AGERALIVDDLVATGGTLSAAIRLLERVGVH 153 (182)
Q Consensus 123 ~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~ 153 (182)
++.+||||||--..... ..+.|.+.|..
T Consensus 6 ~~~~ILivdd~~~~~~~---l~~~L~~~g~~ 33 (154)
T 3gt7_A 6 RAGEILIVEDSPTQAEH---LKHILEETGYQ 33 (154)
T ss_dssp -CCEEEEECSCHHHHHH---HHHHHHTTTCE
T ss_pred CCCcEEEEeCCHHHHHH---HHHHHHHCCCE
Confidence 35678888885444333 33445555643
No 94
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=31.26 E-value=79 Score=25.12 Aligned_cols=37 Identities=14% Similarity=0.113 Sum_probs=24.6
Q ss_pred HHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEee
Q 030139 52 LFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPM 90 (182)
Q Consensus 52 ~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~ 90 (182)
.+.+.+.++++|+|++-. ....+..+|+.+|+|++..
T Consensus 114 ~l~~~~~~~~pDlVv~d~--~~~~~~~~a~~~giP~v~~ 150 (398)
T 4fzr_A 114 EALALAERWKPDLVLTET--YSLTGPLVAATLGIPWIEQ 150 (398)
T ss_dssp HHHHHHHHHCCSEEEEET--TCTHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHhCCCCEEEECc--cccHHHHHHHhhCCCEEEe
Confidence 344444556899999754 2244667788899998754
No 95
>1z7m_E ATP phosphoribosyltransferase; ATP-PRT, histidine biosynthesis, hiszg, alloste evolution; 2.90A {Lactococcus lactis} SCOP: c.94.1.1 PDB: 1z7n_E*
Probab=31.04 E-value=12 Score=28.48 Aligned_cols=18 Identities=56% Similarity=0.837 Sum_probs=14.0
Q ss_pred cccCchHHHHHHHHHHHhcCCeEEE
Q 030139 132 DLVATGGTLSAAIRLLERVGVHVVE 156 (182)
Q Consensus 132 DvitTG~Tl~~~~~~L~~~ga~~v~ 156 (182)
|+++||+||+ +.|-+++.
T Consensus 155 DivsTG~TLr-------~NgL~~ie 172 (208)
T 1z7m_E 155 DIVETGNTLS-------ANGLEVIE 172 (208)
T ss_dssp EEESSSHHHH-------TTTCEEEE
T ss_pred EEeCChHHHH-------HCCCEEeE
Confidence 7999999986 56666664
No 96
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=30.80 E-value=1e+02 Score=24.58 Aligned_cols=35 Identities=17% Similarity=-0.027 Sum_probs=23.0
Q ss_pred HhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEee
Q 030139 56 RYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPM 90 (182)
Q Consensus 56 ~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~ 90 (182)
.++++++|+|++.-.---..+...|..+++|++..
T Consensus 87 ~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 87 VIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp HHHHHCCSEEEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred HHHhcCCCEEEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 44556899999864322233445577889998764
No 97
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=30.67 E-value=1.1e+02 Score=19.99 Aligned_cols=27 Identities=30% Similarity=0.265 Sum_probs=14.8
Q ss_pred CCeEEEEecccCchHHHHHHHHHHHhcCCe
Q 030139 124 GERALIVDDLVATGGTLSAAIRLLERVGVH 153 (182)
Q Consensus 124 gk~VllVDDvitTG~Tl~~~~~~L~~~ga~ 153 (182)
..+||||||--.....+ ...|++.|..
T Consensus 4 ~~~iLivdd~~~~~~~l---~~~L~~~g~~ 30 (136)
T 3t6k_A 4 PHTLLIVDDDDTVAEML---ELVLRGAGYE 30 (136)
T ss_dssp CCEEEEECSCHHHHHHH---HHHHHHTTCE
T ss_pred CCEEEEEeCCHHHHHHH---HHHHHHCCCE
Confidence 45788888865444333 3344455543
No 98
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=30.50 E-value=73 Score=25.31 Aligned_cols=38 Identities=13% Similarity=-0.092 Sum_probs=25.6
Q ss_pred HHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEee
Q 030139 51 DLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPM 90 (182)
Q Consensus 51 ~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~ 90 (182)
..+.+.+..+++|+|++-. ....+...|+.+|+|++..
T Consensus 120 ~~l~~~l~~~~pDvVv~~~--~~~~~~~aa~~~giP~v~~ 157 (412)
T 3otg_A 120 DELQPVIERLRPDLVVQEI--SNYGAGLAALKAGIPTICH 157 (412)
T ss_dssp HHHHHHHHHHCCSEEEEET--TCHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHhcCCCEEEECc--hhhHHHHHHHHcCCCEEEe
Confidence 3444445556899998863 2344667788899998764
No 99
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=30.37 E-value=1.1e+02 Score=19.87 Aligned_cols=27 Identities=30% Similarity=0.313 Sum_probs=16.0
Q ss_pred CCeEEEEecccCchHHHHHHHHHHHhcCCe
Q 030139 124 GERALIVDDLVATGGTLSAAIRLLERVGVH 153 (182)
Q Consensus 124 gk~VllVDDvitTG~Tl~~~~~~L~~~ga~ 153 (182)
..+||||||=-.....+ .+.|.+.|..
T Consensus 6 ~~~iLivdd~~~~~~~l---~~~l~~~g~~ 32 (140)
T 3grc_A 6 RPRILICEDDPDIARLL---NLMLEKGGFD 32 (140)
T ss_dssp CSEEEEECSCHHHHHHH---HHHHHHTTCE
T ss_pred CCCEEEEcCCHHHHHHH---HHHHHHCCCe
Confidence 46788888855444333 3445556654
No 100
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=30.30 E-value=63 Score=25.19 Aligned_cols=41 Identities=12% Similarity=-0.043 Sum_probs=27.6
Q ss_pred HHHHHHHHhcCCCccEEEeeCCC----ChhhHHHHHHHhCCCeEe
Q 030139 49 TIDLFVERYKDKNISVVAGIEAR----GFIFGPPIALAIGAKFVP 89 (182)
Q Consensus 49 ~~~~la~~~~~~~~d~Iv~v~~~----G~~~a~~la~~l~vp~~~ 89 (182)
.++.|+..++..++|+|++-... |-.++..+|..||.|++.
T Consensus 100 ~a~~La~~i~~~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt 144 (264)
T 1o97_C 100 VGRILTEVIKKEAPDMVFAGVQSSDQAYASTGISVASYLNWPHAA 144 (264)
T ss_dssp HHHHHHHHHHHHCCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHhcCCCEEEEcCCccCCchhhHHHHHHHHhCCCccc
Confidence 33444444433368888876532 457999999999999853
No 101
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=30.29 E-value=95 Score=20.86 Aligned_cols=29 Identities=28% Similarity=0.407 Sum_probs=18.6
Q ss_pred CCeEEEEecccCchHHHHHHHHHHHhcCCeEE
Q 030139 124 GERALIVDDLVATGGTLSAAIRLLERVGVHVV 155 (182)
Q Consensus 124 gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v 155 (182)
..+||||||=-. ......+.|++.|..++
T Consensus 36 ~~~Ilivdd~~~---~~~~l~~~L~~~g~~v~ 64 (157)
T 3hzh_A 36 PFNVLIVDDSVF---TVKQLTQIFTSEGFNII 64 (157)
T ss_dssp ECEEEEECSCHH---HHHHHHHHHHHTTCEEE
T ss_pred ceEEEEEeCCHH---HHHHHHHHHHhCCCeEE
Confidence 458999999544 44444556667776553
No 102
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=30.22 E-value=1.9e+02 Score=22.24 Aligned_cols=115 Identities=15% Similarity=0.097 Sum_probs=55.7
Q ss_pred echhhhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHH-hCCCeEeeeccCCC----------CCceeee
Q 030139 35 DITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALA-IGAKFVPMRKPKKL----------PGEVISE 103 (182)
Q Consensus 35 d~~~l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~-l~vp~~~~rk~~~~----------~~~~~~~ 103 (182)
+..+.-.|+.....+++.| ...++|+|+++.. +-+..++.. -++|.+++-...-. ++....-
T Consensus 47 ~~~~a~gd~~~~~~~~~~l----~~~~~DlIiai~t---~aa~a~~~~~~~iPVVf~~v~dp~~~~l~~~~~~~g~nvtG 119 (302)
T 3lkv_A 47 DYKTAQGNPAIAVQIARQF----VGENPDVLVGIAT---PTAQALVSATKTIPIVFTAVTDPVGAKLVKQLEQPGKNVTG 119 (302)
T ss_dssp EEEECTTCHHHHHHHHHHH----HTTCCSEEEEESH---HHHHHHHHHCSSSCEEEEEESCTTTTTSCSCSSSCCSSEEE
T ss_pred EEEeCCCCHHHHHHHHHHH----HhcCCcEEEEcCC---HHHHHHHhhcCCCCeEEEecCCcchhhhcccccCCCCcEEE
Confidence 4455567777666655544 4568999998754 333333333 36898765322110 1111110
Q ss_pred eeeeeccceeEEEEccccCCCCeEEEEecccCch--HHHHHHHHHHHhcCCeEEE
Q 030139 104 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATG--GTLSAAIRLLERVGVHVVE 156 (182)
Q Consensus 104 ~~~~~~~~~~~~l~~~~~~~gk~VllVDDvitTG--~Tl~~~~~~L~~~ga~~v~ 156 (182)
..........+.+-....+..++|.++-|--.++ .....+.+.+.+.|.+.+.
T Consensus 120 v~~~~~~~~~l~l~~~l~P~~k~vgvi~~~~~~~s~~~~~~~~~~~~~~g~~~v~ 174 (302)
T 3lkv_A 120 LSDLSPVEQHVELIKEILPNVKSIGVVYNPGEANAVSLMELLKLSAAKHGIKLVE 174 (302)
T ss_dssp EECCCCHHHHHHHHHHHSTTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred EECCcCHHHHHHHHHHhCCCCCEEEEEeCCCcccHHHHHHHHHHHHHHcCCEEEE
Confidence 0000000011111111235678887776544433 2344555666777876544
No 103
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=29.93 E-value=51 Score=21.27 Aligned_cols=33 Identities=18% Similarity=0.185 Sum_probs=25.9
Q ss_pred cCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEE
Q 030139 121 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVE 156 (182)
Q Consensus 121 ~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~ 156 (182)
+.+++.|+++.+ +|.....+...|++.|-..+.
T Consensus 55 l~~~~~ivvyc~---~g~rs~~a~~~L~~~G~~~v~ 87 (108)
T 1gmx_A 55 NDFDTPVMVMCY---HGNSSKGAAQYLLQQGYDVVY 87 (108)
T ss_dssp SCTTSCEEEECS---SSSHHHHHHHHHHHHTCSSEE
T ss_pred cCCCCCEEEEcC---CCchHHHHHHHHHHcCCceEE
Confidence 356788999875 687888899999999986543
No 104
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=29.89 E-value=97 Score=19.60 Aligned_cols=29 Identities=28% Similarity=0.290 Sum_probs=24.3
Q ss_pred cCCCCeEEEEecccCchHHHHHHHHHHHhcCC
Q 030139 121 VQAGERALIVDDLVATGGTLSAAIRLLERVGV 152 (182)
Q Consensus 121 ~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga 152 (182)
+.+++.|+++. .+|..-..+...|++.|.
T Consensus 53 l~~~~~iv~yC---~~g~rs~~a~~~L~~~G~ 81 (103)
T 3eme_A 53 FNKNEIYYIVC---AGGVRSAKVVEYLEANGI 81 (103)
T ss_dssp CCTTSEEEEEC---SSSSHHHHHHHHHHTTTC
T ss_pred CCCCCeEEEEC---CCChHHHHHHHHHHHCCC
Confidence 35688899988 578888889999999998
No 105
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=29.89 E-value=93 Score=20.04 Aligned_cols=29 Identities=31% Similarity=0.394 Sum_probs=16.6
Q ss_pred CCCeEEEEecccCchHHHHHHHHHHHhcCCeE
Q 030139 123 AGERALIVDDLVATGGTLSAAIRLLERVGVHV 154 (182)
Q Consensus 123 ~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~ 154 (182)
...+||||||--.....+ .+.|.+.|..+
T Consensus 6 ~~~~ilivdd~~~~~~~l---~~~L~~~g~~v 34 (136)
T 3hdv_A 6 ARPLVLVVDDNAVNREAL---ILYLKSRGIDA 34 (136)
T ss_dssp -CCEEEEECSCHHHHHHH---HHHHHHTTCCE
T ss_pred CCCeEEEECCCHHHHHHH---HHHHHHcCceE
Confidence 356799999865544444 34445556543
No 106
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=29.49 E-value=66 Score=24.96 Aligned_cols=41 Identities=7% Similarity=-0.117 Sum_probs=27.3
Q ss_pred HHHHHHHHhcCCCccEEEeeCCC----ChhhHHHHHHHhCCCeEe
Q 030139 49 TIDLFVERYKDKNISVVAGIEAR----GFIFGPPIALAIGAKFVP 89 (182)
Q Consensus 49 ~~~~la~~~~~~~~d~Iv~v~~~----G~~~a~~la~~l~vp~~~ 89 (182)
.++.|+..+++.++|+|++-... |-.++..+|..||.|++.
T Consensus 104 ~A~~La~~i~~~~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt 148 (255)
T 1efv_B 104 VARVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGT 148 (255)
T ss_dssp HHHHHHHHHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHhcCCCEEEEeCcccCCchhhHHHHHHHHhCCCccc
Confidence 33444443333467888876532 467999999999999853
No 107
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=29.28 E-value=77 Score=20.85 Aligned_cols=30 Identities=20% Similarity=0.187 Sum_probs=19.7
Q ss_pred CCCCeEEEEecccCchHHHHHHHHHHHhcC-CeE
Q 030139 122 QAGERALIVDDLVATGGTLSAAIRLLERVG-VHV 154 (182)
Q Consensus 122 ~~gk~VllVDDvitTG~Tl~~~~~~L~~~g-a~~ 154 (182)
.++.+||||||=-..... ..+.|.+.| ..+
T Consensus 18 ~~~~~ilivdd~~~~~~~---l~~~L~~~g~~~v 48 (146)
T 4dad_A 18 QGMINILVASEDASRLAH---LARLVGDAGRYRV 48 (146)
T ss_dssp GGGCEEEEECSCHHHHHH---HHHHHHHHCSCEE
T ss_pred CCCCeEEEEeCCHHHHHH---HHHHHhhCCCeEE
Confidence 557899999996655444 445566667 443
No 108
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=29.24 E-value=86 Score=24.71 Aligned_cols=36 Identities=14% Similarity=0.207 Sum_probs=24.7
Q ss_pred HHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEee
Q 030139 53 FVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPM 90 (182)
Q Consensus 53 la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~ 90 (182)
+.+.+++.++|+|++-.. ...+..+|+.+|+|++..
T Consensus 99 l~~~l~~~~pD~Vi~~~~--~~~~~~~a~~~giP~v~~ 134 (384)
T 2p6p_A 99 MLDFSRAWRPDLIVGGTM--SYVAPLLALHLGVPHARQ 134 (384)
T ss_dssp HHHHHHHHCCSEEEEETT--CTHHHHHHHHHTCCEEEE
T ss_pred HHHHHhccCCcEEEECcc--hhhHHHHHHhcCCCEEEe
Confidence 333444467999998543 345667888999998654
No 109
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=27.92 E-value=87 Score=20.73 Aligned_cols=29 Identities=38% Similarity=0.437 Sum_probs=13.2
Q ss_pred CCCCeEEEEecccCchHHHHHHHHHHHhcCCe
Q 030139 122 QAGERALIVDDLVATGGTLSAAIRLLERVGVH 153 (182)
Q Consensus 122 ~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~ 153 (182)
.++-+||||||--.....+ .+.|.+.|..
T Consensus 12 ~~~~~iLivdd~~~~~~~l---~~~L~~~g~~ 40 (143)
T 3m6m_D 12 VRSMRMLVADDHEANRMVL---QRLLEKAGHK 40 (143)
T ss_dssp ---CEEEEECSSHHHHHHH---HHHHHC--CE
T ss_pred cccceEEEEeCCHHHHHHH---HHHHHHcCCe
Confidence 3456788888854443333 3344455543
No 110
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=27.48 E-value=79 Score=20.36 Aligned_cols=27 Identities=26% Similarity=0.377 Sum_probs=15.3
Q ss_pred CCeEEEEecccCchHHHHHHHHHHHhcCCe
Q 030139 124 GERALIVDDLVATGGTLSAAIRLLERVGVH 153 (182)
Q Consensus 124 gk~VllVDDvitTG~Tl~~~~~~L~~~ga~ 153 (182)
+.+|+||||=-.....+ .+.|++.|..
T Consensus 5 ~~~iLivdd~~~~~~~l---~~~L~~~g~~ 31 (129)
T 3h1g_A 5 SMKLLVVDDSSTMRRII---KNTLSRLGYE 31 (129)
T ss_dssp -CCEEEECSCHHHHHHH---HHHHHHTTCC
T ss_pred CcEEEEEeCCHHHHHHH---HHHHHHcCCc
Confidence 45788888865444444 3445555653
No 111
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=26.99 E-value=63 Score=24.97 Aligned_cols=40 Identities=8% Similarity=0.045 Sum_probs=26.7
Q ss_pred HHHHHHHhcCCCccEEEeeCCC----ChhhHHHHHHHhCCCeEe
Q 030139 50 IDLFVERYKDKNISVVAGIEAR----GFIFGPPIALAIGAKFVP 89 (182)
Q Consensus 50 ~~~la~~~~~~~~d~Iv~v~~~----G~~~a~~la~~l~vp~~~ 89 (182)
++.|+..+...++|+|++-... |-.++..+|..||.|.+.
T Consensus 102 a~~La~~i~~~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt 145 (252)
T 1efp_B 102 AKILAAVARAEGTELIIAGKQAIDNDMNATGQMLAAILGWAQAT 145 (252)
T ss_dssp HHHHHHHHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCchhhHHHHHHHHhCCCccc
Confidence 3334333333467888876533 457999999999999753
No 112
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=26.82 E-value=90 Score=19.83 Aligned_cols=25 Identities=44% Similarity=0.624 Sum_probs=12.6
Q ss_pred CeEEEEecccCchHHHHHHHHHHHhcCC
Q 030139 125 ERALIVDDLVATGGTLSAAIRLLERVGV 152 (182)
Q Consensus 125 k~VllVDDvitTG~Tl~~~~~~L~~~ga 152 (182)
.+||||||=-.....+ .+.|.+.|.
T Consensus 4 ~~ilivdd~~~~~~~l---~~~L~~~g~ 28 (127)
T 3i42_A 4 QQALIVEDYQAAAETF---KELLEMLGF 28 (127)
T ss_dssp EEEEEECSCHHHHHHH---HHHHHHTTE
T ss_pred ceEEEEcCCHHHHHHH---HHHHHHcCC
Confidence 4677777754433333 334444443
No 113
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=26.82 E-value=1.2e+02 Score=19.53 Aligned_cols=33 Identities=27% Similarity=0.306 Sum_probs=26.1
Q ss_pred ccCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEE
Q 030139 120 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVV 155 (182)
Q Consensus 120 ~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v 155 (182)
.+.+++.|+++- .+|..-..+.+.|++.|-+.+
T Consensus 52 ~l~~~~~ivv~C---~~G~rS~~aa~~L~~~G~~~~ 84 (103)
T 3iwh_A 52 SFNKNEIYYIVC---AGGVRSAKVVEYLEANGIDAV 84 (103)
T ss_dssp GCCTTSEEEEEC---SSSSHHHHHHHHHHTTTCEEE
T ss_pred hhcCCCeEEEEC---CCCHHHHHHHHHHHHcCCCEE
Confidence 346788888875 578888889999999998654
No 114
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=26.80 E-value=1.1e+02 Score=24.41 Aligned_cols=32 Identities=16% Similarity=0.288 Sum_probs=26.9
Q ss_pred CCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEE
Q 030139 122 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVEC 157 (182)
Q Consensus 122 ~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v 157 (182)
.+|++++|+ -+|++-++++..|.+.|+..+.+
T Consensus 146 l~gk~~lVl----GAGGaaraia~~L~~~G~~~v~v 177 (312)
T 3t4e_A 146 MRGKTMVLL----GAGGAATAIGAQAAIEGIKEIKL 177 (312)
T ss_dssp CTTCEEEEE----CCSHHHHHHHHHHHHTTCSEEEE
T ss_pred cCCCEEEEE----CcCHHHHHHHHHHHHcCCCEEEE
Confidence 578999976 57999999999999999976544
No 115
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=26.67 E-value=1.1e+02 Score=20.17 Aligned_cols=28 Identities=21% Similarity=0.210 Sum_probs=16.7
Q ss_pred CCCCeEEEEecccCchHHHHHHHHHHHhcCC
Q 030139 122 QAGERALIVDDLVATGGTLSAAIRLLERVGV 152 (182)
Q Consensus 122 ~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga 152 (182)
.++.+||||||--.... ...+.|.+.|.
T Consensus 13 ~~~~~iLivdd~~~~~~---~l~~~L~~~~~ 40 (152)
T 3eul_A 13 PEKVRVVVGDDHPLFRE---GVVRALSLSGS 40 (152)
T ss_dssp -CCEEEEEECSSHHHHH---HHHHHHHHHSS
T ss_pred CceEEEEEEcCCHHHHH---HHHHHHhhCCC
Confidence 55778999998544333 34445555563
No 116
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=25.92 E-value=1e+02 Score=20.03 Aligned_cols=28 Identities=18% Similarity=0.221 Sum_probs=17.2
Q ss_pred CCeEEEEecccCchHHHHHHHHHHHhcCCeE
Q 030139 124 GERALIVDDLVATGGTLSAAIRLLERVGVHV 154 (182)
Q Consensus 124 gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~ 154 (182)
..+||||||=-..... ..+.|++.|..+
T Consensus 6 ~~~ilivdd~~~~~~~---l~~~L~~~g~~v 33 (136)
T 3kto_A 6 HPIIYLVDHQKDARAA---LSKLLSPLDVTI 33 (136)
T ss_dssp -CEEEEECSCHHHHHH---HHHHHTTSSSEE
T ss_pred CCeEEEEcCCHHHHHH---HHHHHHHCCcEE
Confidence 4589999986544444 445566667643
No 117
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=25.89 E-value=99 Score=19.14 Aligned_cols=33 Identities=9% Similarity=0.242 Sum_probs=29.6
Q ss_pred ccCCCCeEEEEecccCchHHHHHHHHHHHhcCC
Q 030139 120 AVQAGERALIVDDLVATGGTLSAAIRLLERVGV 152 (182)
Q Consensus 120 ~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga 152 (182)
.+..|..|+=|+..-.+|.|..++.++|++.+.
T Consensus 43 gL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~ 75 (88)
T 1kwa_A 43 TLHVGDEIREINGISVANQTVEQLQKMLREMRG 75 (88)
T ss_dssp CCCTTCEEEEETTEEGGGSCHHHHHHHHHHCCE
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHhcCCC
Confidence 367899999999999999999999999998764
No 118
>2vd3_A ATP phosphoribosyltransferase; metal-binding, glycosyltransferase, HISG, histidine, magnesi transferase; HET: HIS; 2.45A {Methanobacterium thermoautotrophicum}
Probab=25.82 E-value=21 Score=28.55 Aligned_cols=18 Identities=39% Similarity=0.545 Sum_probs=13.3
Q ss_pred cccCchHHHHHHHHHHHhcCCeEEE
Q 030139 132 DLVATGGTLSAAIRLLERVGVHVVE 156 (182)
Q Consensus 132 DvitTG~Tl~~~~~~L~~~ga~~v~ 156 (182)
|+++||+||+ +.|-+++.
T Consensus 160 DivsTG~TLr-------aNgL~~ie 177 (289)
T 2vd3_A 160 DLSSTGTTLR-------MNHLRVID 177 (289)
T ss_dssp EEESSTHHHH-------HTTEEEEE
T ss_pred EEeCChHHHH-------HCCCEEeE
Confidence 7999999987 45555553
No 119
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=25.80 E-value=95 Score=25.16 Aligned_cols=43 Identities=9% Similarity=-0.082 Sum_probs=28.5
Q ss_pred HHHHHHHHHhcCCCccEEEeeCCCChhhH-HHHHHHhCCCeEee
Q 030139 48 DTIDLFVERYKDKNISVVAGIEARGFIFG-PPIALAIGAKFVPM 90 (182)
Q Consensus 48 ~~~~~la~~~~~~~~d~Iv~v~~~G~~~a-~~la~~l~vp~~~~ 90 (182)
.....+.+.+...++|+|+........++ ...|..+++|++.+
T Consensus 98 ~~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~ 141 (396)
T 3dzc_A 98 KILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVGHV 141 (396)
T ss_dssp HHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCCEEEE
T ss_pred HHHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCCEEEE
Confidence 34444455555678999999876555444 45667789997654
No 120
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=25.67 E-value=54 Score=24.69 Aligned_cols=32 Identities=19% Similarity=0.149 Sum_probs=22.1
Q ss_pred cCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEE
Q 030139 121 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVV 155 (182)
Q Consensus 121 ~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v 155 (182)
...|++|+||||--+... .+.+.|...|..+.
T Consensus 8 ~l~~~~vlvv~d~~~~~~---~l~~~L~~~g~~v~ 39 (254)
T 2ayx_A 8 GLSGKRCWLAVRNASLCQ---FLETSLQRSGIVVT 39 (254)
T ss_dssp TTTTEEEEEECCCHHHHH---HHHHHHTTTTEEEE
T ss_pred ccCCCEEEEEcCCHHHHH---HHHHHHHHCCCEEE
Confidence 368999999999654443 44456677786653
No 121
>1h3d_A ATP-phosphoribosyltransferase; hisitidine biosynthesis, glycosyltransferase; HET: AMP TLA; 2.7A {Escherichia coli} SCOP: c.94.1.1 d.58.5.3 PDB: 1q1k_A*
Probab=25.35 E-value=21 Score=28.69 Aligned_cols=10 Identities=70% Similarity=0.983 Sum_probs=9.2
Q ss_pred cccCchHHHH
Q 030139 132 DLVATGGTLS 141 (182)
Q Consensus 132 DvitTG~Tl~ 141 (182)
|+++||+||+
T Consensus 169 DivsTG~TLr 178 (299)
T 1h3d_A 169 DLVSTGATLE 178 (299)
T ss_dssp EEESSCHHHH
T ss_pred ecccCHHHHH
Confidence 7999999987
No 122
>3c19_A Uncharacterized protein MK0293; protein structure initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 2.50A {Methanopyrus kandleri AV19}
Probab=25.33 E-value=86 Score=23.34 Aligned_cols=33 Identities=24% Similarity=0.239 Sum_probs=28.4
Q ss_pred EecccCchHHHHHHHHHHHh-cCCeEEEEEEEEecC
Q 030139 130 VDDLVATGGTLSAAIRLLER-VGVHVVECACVIELP 164 (182)
Q Consensus 130 VDDvitTG~Tl~~~~~~L~~-~ga~~v~v~~l~~~~ 164 (182)
|||+ ||--+-.+++.|.+ +||..|...-+.-+.
T Consensus 19 IDD~--tpE~lg~~~e~L~~~aGAlDV~~tPi~MKK 52 (186)
T 3c19_A 19 LDDR--DGEVLGDAIQKLIEREEVLACHAVPCVTKK 52 (186)
T ss_dssp EETT--STTHHHHHHHHHTTSTTEEEEEEEEEEETT
T ss_pred CCCC--CHHHHHHHHHHHHhhCCCeEEEeeeceEeC
Confidence 6776 89999999999999 999988887777664
No 123
>3kyj_B CHEY6 protein, putative histidine protein kinase; protein-protein interaction, histidine kinase, response regulator, phosphorylation; 1.40A {Rhodobacter sphaeroides} PDB: 3kyi_B*
Probab=24.38 E-value=90 Score=20.50 Aligned_cols=26 Identities=15% Similarity=0.165 Sum_probs=13.9
Q ss_pred CCCCeEEEEecccCchHHHHHHHHHHHhc
Q 030139 122 QAGERALIVDDLVATGGTLSAAIRLLERV 150 (182)
Q Consensus 122 ~~gk~VllVDDvitTG~Tl~~~~~~L~~~ 150 (182)
.++.+|+||||--.. .....+.|++.
T Consensus 11 ~~~~~vlivdd~~~~---~~~l~~~L~~~ 36 (145)
T 3kyj_B 11 GSPYNVMIVDDAAMM---RLYIASFIKTL 36 (145)
T ss_dssp CCSEEEEEECSCHHH---HHHHHHHHTTC
T ss_pred CCCCeEEEEcCCHHH---HHHHHHHHHhC
Confidence 445678888875433 33333444444
No 124
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=24.35 E-value=1.3e+02 Score=19.98 Aligned_cols=34 Identities=21% Similarity=0.324 Sum_probs=30.6
Q ss_pred ccCCCCeEEEEecccCchHHHHHHHHHHHhcCCe
Q 030139 120 AVQAGERALIVDDLVATGGTLSAAIRLLERVGVH 153 (182)
Q Consensus 120 ~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~ 153 (182)
.+..|..|+=|++.-.++.|...++.++++.+..
T Consensus 71 gL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~~ 104 (120)
T 2iwo_A 71 KLRVGDRIVTICGTSTEGMTHTQAVNLLKNASGS 104 (120)
T ss_dssp CCCTTCEEEEETTEECTTCBHHHHHHHHHHCCSE
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 4678999999999999999999999999998765
No 125
>1nh8_A ATP phosphoribosyltransferase; prtase, de novo His biosynthesis, PRPP, structural genomics, PSI, protei structure initiative; HET: AMP HIS; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.94.1.1 d.58.5.3 PDB: 1nh7_A*
Probab=24.18 E-value=23 Score=28.56 Aligned_cols=17 Identities=35% Similarity=0.507 Sum_probs=12.9
Q ss_pred cccCchHHHHHHHHHHHhcCCeEE
Q 030139 132 DLVATGGTLSAAIRLLERVGVHVV 155 (182)
Q Consensus 132 DvitTG~Tl~~~~~~L~~~ga~~v 155 (182)
|+++||+||+ +.|-+++
T Consensus 174 DiVsTG~TLr-------aNgL~~i 190 (304)
T 1nh8_A 174 DVVGSGRTLS-------QHDLVAF 190 (304)
T ss_dssp EEESSSHHHH-------HTTEEEE
T ss_pred EEeCChHHHH-------HCcCEEc
Confidence 7999999987 4555555
No 126
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=24.16 E-value=96 Score=20.82 Aligned_cols=30 Identities=17% Similarity=0.272 Sum_probs=27.9
Q ss_pred cCCCCeEEEEecccCchHHHHHHHHHHHhc
Q 030139 121 VQAGERALIVDDLVATGGTLSAAIRLLERV 150 (182)
Q Consensus 121 ~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ 150 (182)
+..|..|+=||+.-.++.|...++++|++.
T Consensus 74 L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 103 (127)
T 1wg6_A 74 LRMNDQLIAVNGETLLGKSNHEAMETLRRS 103 (127)
T ss_dssp SCSCCBEEEETTEESTTSCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHHh
Confidence 688999999999999999999999999987
No 127
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=24.01 E-value=1.2e+02 Score=18.68 Aligned_cols=33 Identities=21% Similarity=0.342 Sum_probs=30.1
Q ss_pred cCCCCeEEEEecccCchHHHHHHHHHHHhcCCe
Q 030139 121 VQAGERALIVDDLVATGGTLSAAIRLLERVGVH 153 (182)
Q Consensus 121 ~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~ 153 (182)
+..|..|+=|++.-.+|.|..++.+++++.+..
T Consensus 40 L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~ 72 (88)
T 3e17_A 40 LHEGDIILKINGTVTENMSLTDARKLIEKSRGK 72 (88)
T ss_dssp CCTTCEEEEETTEECTTCCHHHHHHHHHHTTTE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 678999999999999999999999999998763
No 128
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=23.92 E-value=1.1e+02 Score=19.82 Aligned_cols=26 Identities=4% Similarity=-0.010 Sum_probs=17.2
Q ss_pred CCCeEEEEecccCchHHHHHHHHHHHhcC
Q 030139 123 AGERALIVDDLVATGGTLSAAIRLLERVG 151 (182)
Q Consensus 123 ~gk~VllVDDvitTG~Tl~~~~~~L~~~g 151 (182)
...+||||||=-..... ..+.|++.|
T Consensus 13 ~~~~ilivdd~~~~~~~---l~~~L~~~g 38 (135)
T 3snk_A 13 KRKQVALFSSDPNFKRD---VATRLDALA 38 (135)
T ss_dssp CCEEEEEECSCHHHHHH---HHHHHHHTS
T ss_pred CCcEEEEEcCCHHHHHH---HHHHHhhcC
Confidence 35689999996554444 445566667
No 129
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=23.85 E-value=1.5e+02 Score=18.94 Aligned_cols=27 Identities=33% Similarity=0.373 Sum_probs=14.6
Q ss_pred CCeEEEEecccCchHHHHHHHHHHHhcCCe
Q 030139 124 GERALIVDDLVATGGTLSAAIRLLERVGVH 153 (182)
Q Consensus 124 gk~VllVDDvitTG~Tl~~~~~~L~~~ga~ 153 (182)
+++|+||||--.....+. ..|...|..
T Consensus 3 ~~~ilivdd~~~~~~~l~---~~L~~~g~~ 29 (136)
T 1mvo_A 3 NKKILVVDDEESIVTLLQ---YNLERSGYD 29 (136)
T ss_dssp CCEEEEECSCHHHHHHHH---HHHHHTTCE
T ss_pred CCEEEEEECCHHHHHHHH---HHHHHCCcE
Confidence 457888887654433333 344445543
No 130
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=23.08 E-value=77 Score=25.83 Aligned_cols=45 Identities=16% Similarity=0.036 Sum_probs=32.1
Q ss_pred hcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCe
Q 030139 40 LLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKF 87 (182)
Q Consensus 40 ~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~ 87 (182)
+.|++.+-..+..++. +..+|.|++....+.+++..+++.||+|.
T Consensus 57 ~~d~~~~~~~~~~~~~---~~~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 57 FEDEEAAMDVVRQTFV---EFPFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp TTCHHHHHHHHHHHHH---HSCCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred CCCHHHHHHHHHHhhh---hcCCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 4466655444444443 35789999988888888889999999874
No 131
>3fet_A Electron transfer flavoprotein subunit alpha RELA protein; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: MSE; 2.05A {Thermoplasma acidophilum}
Probab=23.03 E-value=1.2e+02 Score=21.78 Aligned_cols=41 Identities=10% Similarity=-0.046 Sum_probs=30.1
Q ss_pred HHHHHHHHHHhcCCCccEEEeeC-CCChhhHHHHHHHhCCCeEe
Q 030139 47 RDTIDLFVERYKDKNISVVAGIE-ARGFIFGPPIALAIGAKFVP 89 (182)
Q Consensus 47 ~~~~~~la~~~~~~~~d~Iv~v~-~~G~~~a~~la~~l~vp~~~ 89 (182)
+..++.|++.++ ++|+|+... ..|-.++..+|..|+.|+..
T Consensus 57 e~~a~~l~~~~~--~p~~Vl~g~t~~g~~vaprlAa~L~~~~~s 98 (166)
T 3fet_A 57 DAVSEGILKIAG--NYDYIAIGSTEVGREIAGYLSFKTGFYTAT 98 (166)
T ss_dssp HHHHHHHHHHHT--TCSEEEEECSHHHHHHHHHHHHHHCCCEEE
T ss_pred HHHHHHHHHHHc--CCCEEEEcCCCccccHHHHHHHHhCCCcee
Confidence 456666666655 788777765 45568999999999999853
No 132
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=22.87 E-value=1.1e+02 Score=20.04 Aligned_cols=29 Identities=21% Similarity=0.293 Sum_probs=23.7
Q ss_pred CCC-CeEEEEecccCchHHHHHHHHHHHhcCC
Q 030139 122 QAG-ERALIVDDLVATGGTLSAAIRLLERVGV 152 (182)
Q Consensus 122 ~~g-k~VllVDDvitTG~Tl~~~~~~L~~~ga 152 (182)
.++ +.|+++.+ .+|..-..+...|++.|-
T Consensus 86 ~~~~~~ivvyC~--~~G~rs~~a~~~L~~~G~ 115 (134)
T 3g5j_A 86 ALNYDNIVIYCA--RGGMRSGSIVNLLSSLGV 115 (134)
T ss_dssp HTTCSEEEEECS--SSSHHHHHHHHHHHHTTC
T ss_pred ccCCCeEEEEEC--CCChHHHHHHHHHHHcCC
Confidence 455 88998875 578888889999999998
No 133
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=22.84 E-value=1.1e+02 Score=24.97 Aligned_cols=43 Identities=9% Similarity=-0.052 Sum_probs=29.1
Q ss_pred HHHHHHHHHhcCCCccEEEeeCCCChhhH-HHHHHHhCCCeEee
Q 030139 48 DTIDLFVERYKDKNISVVAGIEARGFIFG-PPIALAIGAKFVPM 90 (182)
Q Consensus 48 ~~~~~la~~~~~~~~d~Iv~v~~~G~~~a-~~la~~l~vp~~~~ 90 (182)
.....+.+.+...++|+|+........++ ...|..+++|.+.+
T Consensus 101 ~~~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~ 144 (403)
T 3ot5_A 101 RVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLGHV 144 (403)
T ss_dssp HHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCCEEEE
Confidence 34444555556678999999876655554 56677789997543
No 134
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=22.76 E-value=1.2e+02 Score=18.97 Aligned_cols=27 Identities=33% Similarity=0.523 Sum_probs=15.0
Q ss_pred CCeEEEEecccCchHHHHHHHHHHHhcCCe
Q 030139 124 GERALIVDDLVATGGTLSAAIRLLERVGVH 153 (182)
Q Consensus 124 gk~VllVDDvitTG~Tl~~~~~~L~~~ga~ 153 (182)
+.+|+||||=-.....+. +.|.+.|..
T Consensus 2 ~~~ilivdd~~~~~~~l~---~~l~~~g~~ 28 (120)
T 1tmy_A 2 GKRVLIVDDAAFMRMMLK---DIITKAGYE 28 (120)
T ss_dssp CCEEEEECSCHHHHHHHH---HHHHHTTCE
T ss_pred CceEEEEcCcHHHHHHHH---HHHhhcCcE
Confidence 357888888554444433 334455654
No 135
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=22.60 E-value=64 Score=21.82 Aligned_cols=28 Identities=25% Similarity=0.292 Sum_probs=19.1
Q ss_pred CCeEEEEecccCchHHHHHHHHHHHhcCCeE
Q 030139 124 GERALIVDDLVATGGTLSAAIRLLERVGVHV 154 (182)
Q Consensus 124 gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~ 154 (182)
.-|||||||--.....+... |++.|..+
T Consensus 8 ~~rILiVdD~~~~~~~l~~~---L~~~G~~v 35 (123)
T 2lpm_A 8 RLRVLVVEDESMIAMLIEDT---LCELGHEV 35 (123)
T ss_dssp CCCEEEESSSTTTSHHHHHH---HHHHCCCC
T ss_pred CCEEEEEeCCHHHHHHHHHH---HHHCCCEE
Confidence 34799999988777766654 44556553
No 136
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=22.53 E-value=2e+02 Score=22.50 Aligned_cols=54 Identities=6% Similarity=-0.004 Sum_probs=33.7
Q ss_pred hhhcCHHHHHHHHHHHHHHhcCCCccEEEeeCCCChh----hHHHHHHHhCCCeEeee
Q 030139 38 TLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFI----FGPPIALAIGAKFVPMR 91 (182)
Q Consensus 38 ~l~~~~~~~~~~~~~la~~~~~~~~d~Iv~v~~~G~~----~a~~la~~l~vp~~~~r 91 (182)
..-.+|+........+...-.+|++|+++-+...+.. -|.++-..-|+|+.++.
T Consensus 41 GaKm~pe~~~~~~~~~~~~~~~~~pDfvI~isPN~a~PGP~~ARE~l~~~~iP~IvI~ 98 (283)
T 1qv9_A 41 SVKMDPECVEAAVEMALDIAEDFEPDFIVYGGPNPAAPGPSKAREMLADSEYPAVIIG 98 (283)
T ss_dssp TTCCSHHHHHHHHHHHHHHHHHHCCSEEEEECSCTTSHHHHHHHHHHHTSSSCEEEEE
T ss_pred CCCCCHHHHHHHHHHhhhhhhhcCCCEEEEECCCCCCCCchHHHHHHHhCCCCEEEEc
Confidence 3455788888877777543345677766665444333 44445555689997763
No 137
>3m1f_V VOPL, putative uncharacterized protein VPA1370; actin, actin-binding protein, crosslinking, nucleator, prote protein interaction; HET: HIC ATP; 2.89A {Oryctolagus cuniculus}
Probab=22.40 E-value=25 Score=17.97 Aligned_cols=15 Identities=13% Similarity=0.023 Sum_probs=11.4
Q ss_pred cchHHHHHhhccccC
Q 030139 9 QDPRIAGISSAIRVI 23 (182)
Q Consensus 9 ~~~~~~~l~~~~r~~ 23 (182)
||++...|.+.||..
T Consensus 2 cnedrSKLMEqIRqG 16 (31)
T 3m1f_V 2 CNEDHSKLMEQIRQG 16 (31)
T ss_dssp CSTTHHHHHHHHHHC
T ss_pred cchhHHHHHHHHHhh
Confidence 788888888877753
No 138
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=22.37 E-value=1.6e+02 Score=18.88 Aligned_cols=29 Identities=17% Similarity=0.224 Sum_probs=18.3
Q ss_pred CCCCeEEEEecccCchHHHHHHHHHHHhcCCe
Q 030139 122 QAGERALIVDDLVATGGTLSAAIRLLERVGVH 153 (182)
Q Consensus 122 ~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~ 153 (182)
.++.+|+||||--.....+. +.|.+.|..
T Consensus 13 ~~~~~ilivdd~~~~~~~l~---~~L~~~g~~ 41 (138)
T 2b4a_A 13 MQPFRVTLVEDEPSHATLIQ---YHLNQLGAE 41 (138)
T ss_dssp -CCCEEEEECSCHHHHHHHH---HHHHHTTCE
T ss_pred CCCCeEEEECCCHHHHHHHH---HHHHHcCCE
Confidence 56778999998765555444 445555653
No 139
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=22.30 E-value=1.4e+02 Score=19.71 Aligned_cols=29 Identities=17% Similarity=0.101 Sum_probs=16.8
Q ss_pred CCCCeEEEEecccCchHHHHHHHHHHHhcCCe
Q 030139 122 QAGERALIVDDLVATGGTLSAAIRLLERVGVH 153 (182)
Q Consensus 122 ~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~ 153 (182)
....+||||||=-... ..+.+.|.+.|..
T Consensus 12 ~~~~~ILivdd~~~~~---~~l~~~L~~~g~~ 40 (153)
T 3hv2_A 12 TRRPEILLVDSQEVIL---QRLQQLLSPLPYT 40 (153)
T ss_dssp CSCCEEEEECSCHHHH---HHHHHHHTTSSCE
T ss_pred cCCceEEEECCCHHHH---HHHHHHhcccCcE
Confidence 4466899998854433 3334455555543
No 140
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=22.09 E-value=1.4e+02 Score=18.22 Aligned_cols=33 Identities=15% Similarity=0.103 Sum_probs=29.2
Q ss_pred cCCCCeEEEEecccCchHHHHHHHHHHHhcCCe
Q 030139 121 VQAGERALIVDDLVATGGTLSAAIRLLERVGVH 153 (182)
Q Consensus 121 ~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~ 153 (182)
+..|..|+=|++.-.++.+...+.+++++.+..
T Consensus 45 L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 77 (91)
T 1g9o_A 45 LLAGDRLVEVNGENVEKETHQQVVSRIRAALNA 77 (91)
T ss_dssp CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCc
Confidence 678999999999999998899999999987644
No 141
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=21.93 E-value=1.6e+02 Score=20.37 Aligned_cols=27 Identities=41% Similarity=0.518 Sum_probs=14.9
Q ss_pred CCeEEEEecccCchHHHHHHHHHHHhcCCe
Q 030139 124 GERALIVDDLVATGGTLSAAIRLLERVGVH 153 (182)
Q Consensus 124 gk~VllVDDvitTG~Tl~~~~~~L~~~ga~ 153 (182)
+.+||||||--.....+. ..|.+.|..
T Consensus 7 ~~~iLivdd~~~~~~~l~---~~L~~~g~~ 33 (184)
T 3rqi_A 7 DKNFLVIDDNEVFAGTLA---RGLERRGYA 33 (184)
T ss_dssp CCEEEEECSCHHHHHHHH---HHHHHTTCE
T ss_pred CCeEEEEcCCHHHHHHHH---HHHHHCCCE
Confidence 567888888654444333 333444543
No 142
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=21.86 E-value=1.1e+02 Score=18.81 Aligned_cols=34 Identities=6% Similarity=0.166 Sum_probs=29.7
Q ss_pred cCCCCeEEEEecccCchHHHHHHHHHHHhcCCeE
Q 030139 121 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHV 154 (182)
Q Consensus 121 ~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~ 154 (182)
+..|..|+=|++.-.++.+...+.++|++.+...
T Consensus 47 l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~ 80 (95)
T 3r68_A 47 LKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQT 80 (95)
T ss_dssp CCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 6789999999999999989899999999976553
No 143
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=20.99 E-value=1.8e+02 Score=19.11 Aligned_cols=28 Identities=29% Similarity=0.472 Sum_probs=16.0
Q ss_pred CCCeEEEEecccCchHHHHHHHHHHHhcCCe
Q 030139 123 AGERALIVDDLVATGGTLSAAIRLLERVGVH 153 (182)
Q Consensus 123 ~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~ 153 (182)
++.+||||||=-.....+. +.|.+.|..
T Consensus 6 ~~~~iLivdd~~~~~~~l~---~~L~~~g~~ 33 (154)
T 2rjn_A 6 KNYTVMLVDDEQPILNSLK---RLIKRLGCN 33 (154)
T ss_dssp SCCEEEEECSCHHHHHHHH---HHHHTTTCE
T ss_pred CCCeEEEEcCCHHHHHHHH---HHHHHcCCe
Confidence 4567888888654444333 344445543
No 144
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=20.82 E-value=1.5e+02 Score=23.28 Aligned_cols=38 Identities=11% Similarity=-0.053 Sum_probs=24.8
Q ss_pred HHHHHHhcCCCccEEEeeCCCChhhHHHHHHHhCCCeEee
Q 030139 51 DLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPM 90 (182)
Q Consensus 51 ~~la~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~vp~~~~ 90 (182)
..+.+.+..+++|+|+.-. . ...+...|+.+|+|++..
T Consensus 104 ~~l~~~l~~~~PD~Vv~~~-~-~~~~~~aa~~~giP~v~~ 141 (391)
T 3tsa_A 104 PEYLRLAEAWRPSVLLVDV-C-ALIGRVLGGLLDLPVVLH 141 (391)
T ss_dssp HHHHHHHHHHCCSEEEEET-T-CHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHhcCCCEEEeCc-c-hhHHHHHHHHhCCCEEEE
Confidence 3344444556899998864 2 233556778899998765
No 145
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=20.81 E-value=1.7e+02 Score=18.85 Aligned_cols=25 Identities=32% Similarity=0.351 Sum_probs=12.5
Q ss_pred CeEEEEecccCchHHHHHHHHHHHhcCC
Q 030139 125 ERALIVDDLVATGGTLSAAIRLLERVGV 152 (182)
Q Consensus 125 k~VllVDDvitTG~Tl~~~~~~L~~~ga 152 (182)
.+||||||--.. .....+.|.+.|.
T Consensus 4 ~~ilivdd~~~~---~~~l~~~l~~~g~ 28 (143)
T 3jte_A 4 AKILVIDDESTI---LQNIKFLLEIDGN 28 (143)
T ss_dssp CEEEEECSCHHH---HHHHHHHHHHTTC
T ss_pred CEEEEEcCCHHH---HHHHHHHHHhCCc
Confidence 467777774333 2333344445553
No 146
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=20.73 E-value=1.4e+02 Score=22.64 Aligned_cols=30 Identities=20% Similarity=0.323 Sum_probs=25.9
Q ss_pred CCCCeEEEEecccCchHHHHHHHHHHHhcCCeEE
Q 030139 122 QAGERALIVDDLVATGGTLSAAIRLLERVGVHVV 155 (182)
Q Consensus 122 ~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v 155 (182)
.+|++|||| -.|..-...++.|.++|+.+.
T Consensus 29 L~gk~VLVV----GgG~va~~ka~~Ll~~GA~Vt 58 (223)
T 3dfz_A 29 LKGRSVLVV----GGGTIATRRIKGFLQEGAAIT 58 (223)
T ss_dssp CTTCCEEEE----CCSHHHHHHHHHHGGGCCCEE
T ss_pred cCCCEEEEE----CCCHHHHHHHHHHHHCCCEEE
Confidence 789999986 678999999999999998753
No 147
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=20.58 E-value=1.6e+02 Score=19.28 Aligned_cols=41 Identities=20% Similarity=0.307 Sum_probs=32.0
Q ss_pred ccCCCCeEEEEecccCchHHHHHHHHHHHhc---CCeEEEEEEE
Q 030139 120 AVQAGERALIVDDLVATGGTLSAAIRLLERV---GVHVVECACV 160 (182)
Q Consensus 120 ~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~---ga~~v~v~~l 160 (182)
.+..|.+|+=|++.-.++.|..++.+.|++. +...+.+.+.
T Consensus 61 gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~~g~~v~l~v~ 104 (118)
T 1v6b_A 61 GVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQGGDWIDLVVA 104 (118)
T ss_dssp SSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHHhhhcCCCeEEEEEE
Confidence 5678999999999999999999999999875 2345554433
No 148
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=20.20 E-value=1.5e+02 Score=18.66 Aligned_cols=18 Identities=22% Similarity=0.311 Sum_probs=10.3
Q ss_pred CCeEEEEecccCchHHHH
Q 030139 124 GERALIVDDLVATGGTLS 141 (182)
Q Consensus 124 gk~VllVDDvitTG~Tl~ 141 (182)
+-+|+||||--.....+.
T Consensus 4 ~~~ilivdd~~~~~~~l~ 21 (128)
T 1jbe_A 4 ELKFLVVDDFSTMRRIVR 21 (128)
T ss_dssp TCCEEEECSCHHHHHHHH
T ss_pred ccEEEEECCCHHHHHHHH
Confidence 346888887544444333
No 149
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=20.20 E-value=1.2e+02 Score=20.20 Aligned_cols=33 Identities=15% Similarity=0.172 Sum_probs=25.6
Q ss_pred cCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEE
Q 030139 121 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVE 156 (182)
Q Consensus 121 ~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~ 156 (182)
+.+++.|++++. +|..-..+...|++.|-..|.
T Consensus 83 ~~~~~~ivvyC~---~G~rs~~a~~~L~~~G~~~v~ 115 (139)
T 2hhg_A 83 FQEDKKFVFYCA---GGLRSALAAKTAQDMGLKPVA 115 (139)
T ss_dssp GGSSSEEEEECS---SSHHHHHHHHHHHHHTCCSEE
T ss_pred CCCCCeEEEECC---CChHHHHHHHHHHHcCCCCeE
Confidence 356888999985 577778889999999986443
No 150
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=20.05 E-value=1.4e+02 Score=19.64 Aligned_cols=36 Identities=28% Similarity=0.397 Sum_probs=30.7
Q ss_pred cCCCCeEEEEecccCchHHHHHHHHHHHhcCCeEEEE
Q 030139 121 VQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVEC 157 (182)
Q Consensus 121 ~~~gk~VllVDDvitTG~Tl~~~~~~L~~~ga~~v~v 157 (182)
+..|..|+=|++.-.++.|...+.+.+++.| ..+.+
T Consensus 73 L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g-~~v~l 108 (117)
T 2byg_A 73 LQVGDRLLMVNNYSLEEVTHEEAVAILKNTS-EVVYL 108 (117)
T ss_dssp CCTTCEEEEETTEECTTCCHHHHHHHHHTCC-SEEEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEE
Confidence 6889999999999999999999999999876 44443
Done!