Query 030153
Match_columns 182
No_of_seqs 140 out of 1066
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 15:00:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030153.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030153hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2yvw_A UDP-N-acetylglucosamine 100.0 1.7E-29 6E-34 223.8 16.3 147 31-181 5-151 (425)
2 3r38_A UDP-N-acetylglucosamine 100.0 8.2E-29 2.8E-33 221.4 15.9 143 36-181 25-168 (454)
3 3rmt_A 3-phosphoshikimate 1-ca 100.0 4.5E-29 1.5E-33 223.4 14.1 141 35-179 3-145 (455)
4 4fqd_A NIKO protein; beta/alph 100.0 1.5E-28 5.2E-33 221.1 14.8 141 36-179 13-159 (479)
5 3slh_A 3-phosphoshikimate 1-ca 100.0 1.2E-27 4E-32 213.4 15.7 143 36-181 4-148 (441)
6 3nvs_A 3-phosphoshikimate 1-ca 99.9 4.5E-27 1.5E-31 209.9 15.1 138 36-177 25-166 (450)
7 1ejd_A MURA, EPT, UDP-N-acetyl 99.9 1.3E-25 4.4E-30 198.4 15.3 142 36-181 1-142 (419)
8 1rf6_A 5-enolpyruvylshikimate- 99.9 7.7E-25 2.6E-29 194.1 15.2 135 39-178 3-139 (427)
9 2pqc_A 3-phosphoshikimate 1-ca 99.9 1.2E-24 4.3E-29 193.4 15.3 138 38-179 4-143 (445)
10 2o0b_A 3-phosphoshikimate 1-ca 99.9 3.1E-23 1.1E-27 185.2 13.1 129 44-177 10-142 (450)
11 3rmt_A 3-phosphoshikimate 1-ca 99.6 3.2E-15 1.1E-19 133.7 10.1 142 38-181 217-370 (455)
12 3slh_A 3-phosphoshikimate 1-ca 99.6 1.6E-14 5.4E-19 128.6 12.3 140 38-181 217-370 (441)
13 3nvs_A 3-phosphoshikimate 1-ca 99.5 3E-14 1E-18 127.0 11.0 137 38-181 247-390 (450)
14 2o0b_A 3-phosphoshikimate 1-ca 99.5 4.4E-14 1.5E-18 126.0 11.1 137 38-181 221-365 (450)
15 1rf6_A 5-enolpyruvylshikimate- 99.5 1.6E-13 5.5E-18 121.4 12.8 142 38-181 213-364 (427)
16 2yvw_A UDP-N-acetylglucosamine 99.5 4.8E-13 1.6E-17 118.2 13.7 130 39-180 152-285 (425)
17 2pqc_A 3-phosphoshikimate 1-ca 99.4 1.8E-12 6.1E-17 115.1 13.1 141 38-180 220-372 (445)
18 1ejd_A MURA, EPT, UDP-N-acetyl 99.4 2E-12 6.7E-17 114.0 13.1 136 38-181 212-351 (419)
19 3r38_A UDP-N-acetylglucosamine 99.3 1.2E-11 4.2E-16 110.3 13.8 129 39-180 169-303 (454)
20 4fqd_A NIKO protein; beta/alph 99.2 1.3E-11 4.6E-16 110.8 8.5 138 38-181 242-388 (479)
21 3tut_A RNA 3'-terminal phospha 95.0 0.095 3.2E-06 45.3 8.5 125 51-177 25-172 (358)
22 3pqv_A RCL1 protein; RTC-like, 89.9 0.51 1.7E-05 40.7 5.9 113 63-176 20-150 (365)
23 4hkm_A Anthranilate phosphorib 62.6 9.6 0.00033 32.2 4.9 83 83-176 55-137 (346)
24 2r6o_A Putative diguanylate cy 54.0 42 0.0014 27.2 7.4 81 84-175 163-257 (294)
25 2elc_A Trp D, anthranilate pho 48.1 32 0.0011 28.8 5.7 81 83-176 49-130 (329)
26 4hjf_A Ggdef family protein; s 47.3 27 0.00093 29.0 5.2 81 85-176 213-307 (340)
27 2bas_A YKUI protein; EAL domai 42.9 1.2E+02 0.0039 25.9 8.7 101 64-175 133-251 (431)
28 3r88_A Anthranilate phosphorib 42.5 50 0.0017 28.2 6.2 83 83-177 75-159 (377)
29 3pjx_A Cyclic dimeric GMP bind 39.0 1.1E+02 0.0036 25.7 7.8 79 87-176 326-418 (430)
30 4f3h_A Fimxeal, putative uncha 36.8 61 0.0021 25.0 5.5 81 85-176 144-238 (250)
31 1vqu_A Anthranilate phosphorib 36.7 70 0.0024 27.2 6.2 81 83-176 76-167 (374)
32 3hv8_A Protein FIMX; EAL phosp 35.7 1.2E+02 0.0042 23.5 7.2 101 64-176 129-247 (268)
33 2tpt_A Thymidine phosphorylase 33.9 73 0.0025 27.8 6.0 78 83-176 53-136 (440)
34 2lqo_A Putative glutaredoxin R 32.6 88 0.003 20.8 5.1 30 71-101 3-32 (92)
35 3gfz_A Klebsiella pneumoniae B 32.3 1E+02 0.0035 26.1 6.6 82 84-176 291-386 (413)
36 1khd_A Anthranilate phosphorib 31.5 59 0.002 27.4 4.8 82 83-176 62-144 (345)
37 3s83_A Ggdef family protein; s 31.4 64 0.0022 25.0 4.8 118 48-176 92-234 (259)
38 3hvb_A Protein FIMX; EAL phosp 28.5 1.8E+02 0.0063 24.2 7.6 79 86-176 324-416 (437)
39 3tut_A RNA 3'-terminal phospha 28.4 1.8E+02 0.0062 24.7 7.4 42 69-112 314-356 (358)
40 1uou_A Thymidine phosphorylase 27.9 92 0.0031 27.5 5.6 78 83-176 79-161 (474)
41 1brw_A PYNP, protein (pyrimidi 27.1 1.1E+02 0.0036 26.7 5.8 78 83-176 52-133 (433)
42 3ldt_A Outer membrane protein, 26.9 1.6E+02 0.0055 21.7 6.2 84 89-174 30-124 (169)
43 2dsj_A Pyrimidine-nucleoside ( 24.9 85 0.0029 27.3 4.7 78 83-176 52-132 (423)
44 1k8b_A EIF-2-beta, probable tr 23.1 85 0.0029 19.1 3.2 38 73-113 8-51 (52)
45 2fvt_A Conserved hypothetical 22.1 1.1E+02 0.0039 22.1 4.3 39 140-178 62-100 (135)
46 3sy8_A ROCR; TIM barrel phosph 21.9 73 0.0025 26.5 3.7 34 136-176 338-371 (400)
47 3h5q_A PYNP, pyrimidine-nucleo 20.8 1.9E+02 0.0064 25.2 6.1 78 83-176 55-136 (436)
48 2gjh_A Designed protein; oblig 20.2 1.2E+02 0.0043 18.5 3.5 25 88-114 22-49 (62)
No 1
>2yvw_A UDP-N-acetylglucosamine 1-carboxyvinyltransferase; peptidoglycan, structu genomics, NPPSFA; HET: EPU; 1.81A {Aquifex aeolicus} PDB: 3swg_A*
Probab=99.96 E-value=1.7e-29 Score=223.79 Aligned_cols=147 Identities=39% Similarity=0.695 Sum_probs=130.7
Q ss_pred chhhhccceEEcCCCccceEEEccCCHHHHHHHHHHhcccCCcEEEeeCCCCChHHHHHHHHHHHcCCeEEEeeeCCEEE
Q 030153 31 TQIREAETLTITGPTQLSGHVPISGSKNSSLCLLAATLLCSNSCLLHNVPTGLSDTKAMLSILRSLGAKIEFNERNKEIL 110 (182)
Q Consensus 31 ~~~~~m~~i~I~~~~~l~g~v~vpgsKs~a~~~laAA~La~g~~~I~n~~~~s~Dv~~~l~~L~~lGa~I~~~~~~~~l~ 110 (182)
+..+-|+++.|+++++++|+|++|||||.++|++++|+|++|+++|+|++. ++|++.|+++|++||++|+ ++++.++
T Consensus 5 ~~~~~m~~~~i~~~~~l~G~v~vpgsKs~s~r~l~~aaLa~g~~~i~n~~~-~~D~~~~~~~l~~lG~~i~--~~~~~~~ 81 (425)
T 2yvw_A 5 TLYTYRDYFVIRGGKPLTGKVKISGAKNAALPIMFATILTEEPCTITNVPD-LLDVRNTLLLLRELGAELE--FLNNTVF 81 (425)
T ss_dssp ----CCCEEEEECCCCCEEEEECCBCHHHHHHHHHHGGGCSSCEEEESCCC-SHHHHHHHHHHHHTTCEEE--EETTEEE
T ss_pred cccCCcceEEEeCCCcceEEEEccCcHHHHHHHHHHHHhCCCCEEEecCCc-hHHHHHHHHHHHHCCCEEE--EeCCEEE
Confidence 333448888899888899999999999999999999999999999999999 9999999999999999999 7778899
Q ss_pred EEcCCCCCCCCChhhhhhhhhHHHHHHHHhhhhCCeEEEecCCCCCCCCChHHHHHHHHHCCCEEEEcCcc
Q 030153 111 VNTDGVGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGAAVEISYVF 181 (182)
Q Consensus 111 I~~~~~~~~~~~~~~~~~sgts~~~l~~lla~~~~~~~~~~G~~~l~~Rpi~~l~~~L~~lGa~v~~~~~~ 181 (182)
|++ +..++..+.++++++|+++||++|++++++++.+.++|+++|++|||+.++++|++|||++++.+++
T Consensus 82 i~~-~~~~~~~p~~~~~~~rts~~~l~~l~a~~~~~~~~l~G~~~l~~RPi~~~~~~L~~lGa~i~~~~g~ 151 (425)
T 2yvw_A 82 INP-SINSFITNQEIIRRMRASVLSLGPLLGRFGRAVVGLPGGCSIGARPIDQHLKFFKEAGADVEVREGY 151 (425)
T ss_dssp EEC-CCCCCEECHHHHHHCGGGGGGHHHHHHHHSEEEEECCCCBTTBCCCCHHHHHHHHHTTCEEEEETTE
T ss_pred EEC-CCCCCCCchhhhcccchHHHHHHHHhccCCcEEEEECCCcccccCCHHHHHHHHHHCCCEEEecCCE
Confidence 999 6545566666799999999999999998887789999999999999999999999999999875554
No 2
>3r38_A UDP-N-acetylglucosamine 1-carboxyvinyltransferase; biosynthesis and degradation of murein sacculus and peptidog infectious diseases; 2.23A {Listeria monocytogenes} PDB: 3sg1_A*
Probab=99.96 E-value=8.2e-29 Score=221.43 Aligned_cols=143 Identities=43% Similarity=0.699 Sum_probs=130.8
Q ss_pred ccceEEcCCCccceEEEccCCHHHHHHHHHHhccc-CCcEEEeeCCCCChHHHHHHHHHHHcCCeEEEeeeCCEEEEEcC
Q 030153 36 AETLTITGPTQLSGHVPISGSKNSSLCLLAATLLC-SNSCLLHNVPTGLSDTKAMLSILRSLGAKIEFNERNKEILVNTD 114 (182)
Q Consensus 36 m~~i~I~~~~~l~g~v~vpgsKs~a~~~laAA~La-~g~~~I~n~~~~s~Dv~~~l~~L~~lGa~I~~~~~~~~l~I~~~ 114 (182)
|+++.|+++++++|+|++|||||+++++|+||+|+ +|+++|+|++. ++|++.|+++|++||++|+ ++++.++|++.
T Consensus 25 m~~~~i~~~~~l~G~v~vpgsKs~~~~~l~aa~La~~g~s~i~n~~~-~~D~~~~~~~l~~lG~~i~--~~~~~~~i~~~ 101 (454)
T 3r38_A 25 MEKIIVRGGKQLNGSVKMEGAKNAVLPVIAATLLASKGTSVLKNVPN-LSDVFTINEVLKYLNADVS--FVNDEVTVDAT 101 (454)
T ss_dssp TCEEEEECCCCCEEEEECCBCHHHHHHHHHHGGGEEESCEEEESCCC-CHHHHHHHHHHHHTTCEEE--EETTEEEEECC
T ss_pred cceEEEeCCCCceEEEEcCCCHHHHHHHHHHHHhCCCCeEEECCCCC-cHHHHHHHHHHHHCCCEEE--EECCEEEEECC
Confidence 88899999989999999999999999999999999 99999999999 9999999999999999999 77789999998
Q ss_pred CCCCCCCChhhhhhhhhHHHHHHHHhhhhCCeEEEecCCCCCCCCChHHHHHHHHHCCCEEEEcCcc
Q 030153 115 GVGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGAAVEISYVF 181 (182)
Q Consensus 115 ~~~~~~~~~~~~~~sgts~~~l~~lla~~~~~~~~~~G~~~l~~Rpi~~l~~~L~~lGa~v~~~~~~ 181 (182)
+..+...|.+.+..++++++|++|++++++++.+.++|+++|++|||++++++|++|||+++..+|+
T Consensus 102 ~~~~~~~~~~~~~~~Ras~l~l~~l~a~~~~~~~~l~G~~~l~~RPi~~~~~~L~~lGa~i~~~~g~ 168 (454)
T 3r38_A 102 GEITSDAPFEYVRKMRASIVVMGPLLARTGSARVALPGGCAIGSRPVDLHLKGFEAMGAVVKIENGY 168 (454)
T ss_dssp SCCCCEECSHHHHHCGGGGGGHHHHHHHHSEEEEECCCCCSSSSCCSHHHHHHHHHTTCEEEEETTE
T ss_pred CCCCCcCChhHhhccchHHHHHHHHHhCCCCeEEEeCCCcccccCCHHHHHHHHHHCCCEEEecCCE
Confidence 7655666766677778888899999998887789999999999999999999999999999876664
No 3
>3rmt_A 3-phosphoshikimate 1-carboxyvinyltransferase 1; structural genomics, protein structure initiative; 2.80A {Bacillus halodurans}
Probab=99.96 E-value=4.5e-29 Score=223.37 Aligned_cols=141 Identities=18% Similarity=0.232 Sum_probs=126.4
Q ss_pred hccceEEcCCCccceEEEccCCHHHHHHHHHHhcccCCcEEEeeCCCCChHHHHHHHHHHHcCCeEEEeeeCCEEEEEcC
Q 030153 35 EAETLTITGPTQLSGHVPISGSKNSSLCLLAATLLCSNSCLLHNVPTGLSDTKAMLSILRSLGAKIEFNERNKEILVNTD 114 (182)
Q Consensus 35 ~m~~i~I~~~~~l~g~v~vpgsKs~a~~~laAA~La~g~~~I~n~~~~s~Dv~~~l~~L~~lGa~I~~~~~~~~l~I~~~ 114 (182)
||+++.|+++++++|+|++|||||.++|++++|+|++|+++|+|++. ++|++.|+++|++||++|+ ++++.++|+|.
T Consensus 3 m~~~~~i~~~~~l~G~v~vpgsKs~s~Rali~AaLa~g~s~i~n~~~-~~Dv~~~~~~L~~lG~~i~--~~~~~~~i~g~ 79 (455)
T 3rmt_A 3 MENKTVIPHAKGLKGTIKVPGDKSISHRAVMFGALAKGTTTVEGFLP-GADCLSTISCFQKLGVSIE--QAEERVTVKGK 79 (455)
T ss_dssp -CCEEEECCCSCEEEEECCCBCHHHHHHHHHHHHHSBSCEEEESCCC-SHHHHHHHHHHHTTTCEEE--EETTEEEEECC
T ss_pred CCceEEEcCCCcceEEEEecCcHHHHHHHHHHHHhcCCCEEEccCCc-cHHHHHHHHHHHHcCCeEE--ecCCEEEEeCC
Confidence 56789999999999999999999999998888889999999999999 9999999999999999999 77889999998
Q ss_pred CCCCCCCChh--hhhhhhhHHHHHHHHhhhhCCeEEEecCCCCCCCCChHHHHHHHHHCCCEEEEcC
Q 030153 115 GVGRVEPCLE--EMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGAAVEISY 179 (182)
Q Consensus 115 ~~~~~~~~~~--~~~~sgts~~~l~~lla~~~~~~~~~~G~~~l~~Rpi~~l~~~L~~lGa~v~~~~ 179 (182)
+...+..+.+ .|++||+++||+++++++.+ +.+.++|+|+|++|||++|+++|++|||++++.+
T Consensus 80 ~~~~~~~~~~~i~~g~SGt~mRll~g~la~~~-~~~~l~G~~~l~~RPi~~~~~~L~~lGa~i~~~~ 145 (455)
T 3rmt_A 80 GWDGLREPSDILDVGNSGTTTRLILGILSTLP-FHSVIIGDESIGKRPMKRVTEPLKSMGAQIDGRD 145 (455)
T ss_dssp CGGGCCCCSSCEECTTCHHHHHHHHHHHTTSS-SEEEEECCTTGGGSCCHHHHHHHHHTTCEEEEHH
T ss_pred CCCCcCCCcceeecccccccHHHHHHHHHcCC-cEEEEeCCcccccCCHHHHHHHHHHCCCEEEEec
Confidence 6544444544 48999999999999988765 6789999999999999999999999999998754
No 4
>4fqd_A NIKO protein; beta/alpha inverse barrel, enolpyruvyl transferase, fosfomyc binding, transferase; 2.50A {Streptomyces tendae}
Probab=99.96 E-value=1.5e-28 Score=221.06 Aligned_cols=141 Identities=27% Similarity=0.436 Sum_probs=122.6
Q ss_pred ccceEEcCCCccceEEEccCCHHHHHHHHHHhcccCCcEEEeeCCCCChHHHHHHHHHHHcCCeEEEee--eCCEEEEEc
Q 030153 36 AETLTITGPTQLSGHVPISGSKNSSLCLLAATLLCSNSCLLHNVPTGLSDTKAMLSILRSLGAKIEFNE--RNKEILVNT 113 (182)
Q Consensus 36 m~~i~I~~~~~l~g~v~vpgsKs~a~~~laAA~La~g~~~I~n~~~~s~Dv~~~l~~L~~lGa~I~~~~--~~~~l~I~~ 113 (182)
+..+.|+++++++|+|++|||||.++|+|++|+|++|+++|+|++. ++|++.|+++|++||++|+ + +++.++|+|
T Consensus 13 ~~~~~i~~~~~l~G~v~vpgsKs~s~r~l~~aaLa~g~s~i~n~~~-s~D~~~~~~~l~~lG~~i~--~~~~~~~~~i~g 89 (479)
T 4fqd_A 13 EPLLEIHGGNRLSGAVRTSGFKHSLVTTVAAAATASAPVRIENCPD-IVETAVLGEIFRAAGAHAH--YDGADETFTVDA 89 (479)
T ss_dssp CEEEEEECCCCBCSEEECCBCHHHHHHHHHHHTTCSSEEEEESCCC-SHHHHHHHHHHHHTTCEEE--EETTTTEEEEEC
T ss_pred CceEEEeCCCcceEEEEcCCcHHHHHHHHHHHHhcCCCEEEccCCC-chhHHHHHHHHHHcCCEEE--EecCCCEEEEEC
Confidence 4568899999999999999999999999999999999999999999 9999999999999999999 6 678999999
Q ss_pred CCCCCCCCChhhhhhhhhHHHHHHHHhhhhCCeEEEecCCCCCC----CCChHHHHHHHHHCCCEEEEcC
Q 030153 114 DGVGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIG----ERPVDLYVRGLRALGAAVEISY 179 (182)
Q Consensus 114 ~~~~~~~~~~~~~~~sgts~~~l~~lla~~~~~~~~~~G~~~l~----~Rpi~~l~~~L~~lGa~v~~~~ 179 (182)
.+......+.++++++|+++||++|++++++++.+.++|+++|+ +|||++|+++|++|||++++.+
T Consensus 90 ~~~~~~~~~~~~~~~~~ts~~~l~~l~a~~~~~~~~l~G~~~l~~~~~~RPi~~~~~~L~~lGa~i~~~~ 159 (479)
T 4fqd_A 90 SAWDRAELPADLVGRIHGSLYLLPALVSRNGVARLSASGGCPIGEGPRGRPDEHLLDVMGRFGVTTRLTA 159 (479)
T ss_dssp TTCCCSCCCHHHHTTCSGGGGGHHHHHHHTSEEEECC------------CCCHHHHHHHHTTTCEEEECT
T ss_pred CCCCCCCCChhHhcccchhHHHHHHHHhcCCCeEEEEeCCcccccCCCCCChHHHHHHHHHCCCEEEecc
Confidence 87666667777789999999999999998887788999999999 9999999999999999998754
No 5
>3slh_A 3-phosphoshikimate 1-carboxyvinyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: S3P GPJ SKM PGE 1PE PG4; 1.70A {Coxiella burnetii} PDB: 3roi_A* 4egr_A* 4gfp_A 3tr1_A
Probab=99.95 E-value=1.2e-27 Score=213.36 Aligned_cols=143 Identities=20% Similarity=0.245 Sum_probs=124.0
Q ss_pred ccceEEcCCCccceEEEccCCHHHHHHHHHHhcccCCcEEEeeCCCCChHHHHHHHHHHHcCCeEEEeeeCCEEEEEcCC
Q 030153 36 AETLTITGPTQLSGHVPISGSKNSSLCLLAATLLCSNSCLLHNVPTGLSDTKAMLSILRSLGAKIEFNERNKEILVNTDG 115 (182)
Q Consensus 36 m~~i~I~~~~~l~g~v~vpgsKs~a~~~laAA~La~g~~~I~n~~~~s~Dv~~~l~~L~~lGa~I~~~~~~~~l~I~~~~ 115 (182)
|. +.|+++++++|+|++|||||.++|+|++|+|++|+++|+|++. ++|++.|+++|++||++|+++.+++.++|++.+
T Consensus 4 ~~-~~i~~~~~l~G~v~vpgsKs~s~r~l~~aaLa~g~s~i~n~~~-~~D~~~~~~~L~~lG~~i~~~~~~~~~~i~~~~ 81 (441)
T 3slh_A 4 MD-YQTIPSQGLSGEICVPGDKSISHRAVLLAAIAEGQTQVDGFLM-GADNLAMVSALQQMGASIQVIEDENILVVEGVG 81 (441)
T ss_dssp EE-EEECCCSCCEEEEECCBCHHHHHHHHHHHHHSBSEEEEESCCC-SHHHHHHHHHHHHTTCEEEEEGGGTEEEEECCC
T ss_pred ce-EEEeCCCcceEEEEcCCcHHHHHHHHHHHHHcCCCEEEcCCCC-cHHHHHHHHHHHHcCCEEEEecCCCEEEEeccc
Confidence 44 7899999999999999999999999999999999999999999 999999999999999999932145699999986
Q ss_pred CCCCCCChh--hhhhhhhHHHHHHHHhhhhCCeEEEecCCCCCCCCChHHHHHHHHHCCCEEEEcCcc
Q 030153 116 VGRVEPCLE--EMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGAAVEISYVF 181 (182)
Q Consensus 116 ~~~~~~~~~--~~~~sgts~~~l~~lla~~~~~~~~~~G~~~l~~Rpi~~l~~~L~~lGa~v~~~~~~ 181 (182)
...+..+.. .+++||+++||+.+++++.. +.++++|+|+|++|||++|+++|++|||++...+++
T Consensus 82 ~~~~~~~~~~i~~g~sgtt~r~l~g~l~~~~-g~~~l~G~~~l~~RPi~~~~~~L~~lGa~i~~~~g~ 148 (441)
T 3slh_A 82 MTGLQAPPEALDCGNSGTAIRLLSGLLAGQP-FNTVLTGDSSLQRRPMKRIIDPLTLMGAKIDSTGNV 148 (441)
T ss_dssp TTCCCCCSSCEECTTCHHHHHHHHHHHTTSS-SEEEEECCTTGGGSCCHHHHHHHHHTTCEEEEETTE
T ss_pred cCCCCCCcceeeeccccccHHHHHHHHHhCC-CEEEEeCCcccccCCHHHHHHHHHHcCCEEEecCCe
Confidence 444444433 38999999999999888644 567899999999999999999999999999655554
No 6
>3nvs_A 3-phosphoshikimate 1-carboxyvinyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: S3P SKM GPJ EPE; 1.02A {Vibrio cholerae} PDB: 1g6s_A* 1g6t_A* 1x8r_A* 1x8t_A* 2aa9_A* 2aay_A* 2pq9_A* 1eps_A 1mi4_A* 3fjz_A* 3fjx_A* 2qfs_A* 2qft_A* 2qfq_A* 2qfu_A* 3fk0_A* 3fk1_A* 1q36_A* 3ti2_A* 1p88_A ...
Probab=99.95 E-value=4.5e-27 Score=209.89 Aligned_cols=138 Identities=28% Similarity=0.310 Sum_probs=122.6
Q ss_pred ccceEEcCCCccceEEEccCCHHHHHHHHHHhcccCCcEEEeeCCCCChHHHHHHHHHHHcCCeEEEeeeCC--EEEEEc
Q 030153 36 AETLTITGPTQLSGHVPISGSKNSSLCLLAATLLCSNSCLLHNVPTGLSDTKAMLSILRSLGAKIEFNERNK--EILVNT 113 (182)
Q Consensus 36 m~~i~I~~~~~l~g~v~vpgsKs~a~~~laAA~La~g~~~I~n~~~~s~Dv~~~l~~L~~lGa~I~~~~~~~--~l~I~~ 113 (182)
|+++.|+++++++|+|++|||||.++|+|++|+|++|+++|+|++. ++|++.|+++|++||++|+ ++++ .++|+|
T Consensus 25 m~~~~i~~~~~l~G~v~vpgsKs~s~r~l~~aaLa~g~s~i~n~~~-~~D~~~~~~~L~~lG~~i~--~~~~~~~~~i~g 101 (450)
T 3nvs_A 25 MESLTLQPIELISGEVNLPGSKSVSNRALLLAALASGTTRLTNLLD-SDDIRHMLNALTKLGVNYR--LSADKTTCEVEG 101 (450)
T ss_dssp CCEEEECCCCCBCEEEECCBCHHHHHHHHHHHHHSBSEEEEESCCC-SHHHHHHHHHHHHTTCEEE--ECTTSSCEEEEC
T ss_pred cceEEEcCCCcceEEEEeCCcHHHHHHHHHHHHHcCCCEEEcCCCc-cHHHHHHHHHHHHcCCeEE--EcCCccEEEEeC
Confidence 8889999999999999999999999999999999999999999999 9999999999999999999 5554 599998
Q ss_pred CCCC-CCCCChh-hhhhhhhHHHHHHHHhhhhCCeEEEecCCCCCCCCChHHHHHHHHHCCCEEEE
Q 030153 114 DGVG-RVEPCLE-EMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGAAVEI 177 (182)
Q Consensus 114 ~~~~-~~~~~~~-~~~~sgts~~~l~~lla~~~~~~~~~~G~~~l~~Rpi~~l~~~L~~lGa~v~~ 177 (182)
.+.. ....+.+ ++++||+++|||+|+++. +++.+.++|+++|++|||+.++++|++|||++++
T Consensus 102 ~~~~~~~~~~~~l~~g~sgt~~R~l~~~la~-~~~~~~l~G~~~l~~RPi~~~l~~L~~lGa~i~~ 166 (450)
T 3nvs_A 102 LGQAFHTTQPLELFLGNAGTAMRPLAAALCL-GQGDYVLTGEPRMKERPIGHLVDALRQAGAQIEY 166 (450)
T ss_dssp CSSCCBCSSCEEEECTTCHHHHHHHHHHTTS-SBCEEEEECSGGGGGSCCHHHHHHHHHTTCEEEE
T ss_pred CCCCcCCCCCceEEccCccchHHHHHHHHhc-CCcEEEEeCCcccccCCHHHHHHHHHHCCCEEEE
Confidence 7521 1222223 389999999999999985 5678999999999999999999999999999987
No 7
>1ejd_A MURA, EPT, UDP-N-acetylglucosamine enolpyruvyltransferase; inside-OUT alpha/beta barrel; 1.55A {Enterobacter cloacae} SCOP: d.68.2.2 PDB: 1ejc_A 1eyn_A* 1ybg_A* 3kqa_A* 3lth_A* 3spb_A 3swq_A* 3upk_A* 1naw_A 1dlg_A 1ryw_A* 1q3g_A* 3su9_A* 3swi_A* 3v4t_A* 3v5v_A* 3swa_A* 1uae_A* 3kqj_A* 3kr6_A* ...
Probab=99.93 E-value=1.3e-25 Score=198.41 Aligned_cols=142 Identities=37% Similarity=0.733 Sum_probs=127.5
Q ss_pred ccceEEcCCCccceEEEccCCHHHHHHHHHHhcccCCcEEEeeCCCCChHHHHHHHHHHHcCCeEEEeeeCCEEEEEcCC
Q 030153 36 AETLTITGPTQLSGHVPISGSKNSSLCLLAATLLCSNSCLLHNVPTGLSDTKAMLSILRSLGAKIEFNERNKEILVNTDG 115 (182)
Q Consensus 36 m~~i~I~~~~~l~g~v~vpgsKs~a~~~laAA~La~g~~~I~n~~~~s~Dv~~~l~~L~~lGa~I~~~~~~~~l~I~~~~ 115 (182)
|+++.|++++.+.|+|++|||||+++|+|+||+|++|+++|+|++. ++|+..++++|++||++|+ .++ +++|.+.+
T Consensus 1 m~~~~i~~~~~l~G~v~i~gsks~~~r~Llaa~la~g~t~i~n~~~-~~dv~~t~~~L~~lGa~i~--~~~-~~~I~~~~ 76 (419)
T 1ejd_A 1 MDKFRVQGPTRLQGEVTISGAKNAALPILFAALLAEEPVEIQNVPK-LKDIDTTMKLLTQLGTKVE--RXG-SVWIDASN 76 (419)
T ss_dssp CEEEEEEECCCCEEEEECCBCHHHHHHHHHHGGGBSSCEEEESCCC-CHHHHHHHHHHHHTTCEEE--ESS-SEEEECTT
T ss_pred CCeEEEeCCCCceEEEEecCcHHHHHHHHHHHHHCCCcEEEecCCC-cHHHHHHHHHHHHCCCEEE--Ecc-eEEEecCC
Confidence 6678888877899999999999999999999999999999999999 9999999999999999999 656 88999876
Q ss_pred CCCCCCChhhhhhhhhHHHHHHHHhhhhCCeEEEecCCCCCCCCChHHHHHHHHHCCCEEEEcCcc
Q 030153 116 VGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGAAVEISYVF 181 (182)
Q Consensus 116 ~~~~~~~~~~~~~sgts~~~l~~lla~~~~~~~~~~G~~~l~~Rpi~~l~~~L~~lGa~v~~~~~~ 181 (182)
...+..+.+.+++++++++|++|+++.+++..+.++|++++++||++.+++.|++||+++++.+++
T Consensus 77 ~~~~~~~~d~~~~~ras~~l~~alla~~~~~~v~l~G~~~l~~rp~~~~~~~L~~mGa~i~~~~g~ 142 (419)
T 1ejd_A 77 VNNFSAPYDLVKTMRASIWALGPLVARFGQGQVSLPGGCAIGARPVDLHIFGLEKLGAEIKLEEGY 142 (419)
T ss_dssp CCCCEECHHHHTTCGGGGGGHHHHHHHHSEEEEECCCCSCCSSCTTHHHHHHHHHTTCEEEEETTE
T ss_pred CCCCcCchHHhhhhhHHHHHHHHHhhcCCceEEEecCCcccCCCchHHHHHHHHHCCCEEEEcCCE
Confidence 545666777788999999999999987777788899999999999999999999999999976654
No 8
>1rf6_A 5-enolpyruvylshikimate-3-phosphate synthase; shikimate pathway, EPSP synthase, glyphosate, PEP, transferase; HET: GPJ S3P; 1.90A {Streptococcus pneumoniae} SCOP: d.68.2.2 PDB: 1rf5_A 1rf4_A*
Probab=99.92 E-value=7.7e-25 Score=194.09 Aligned_cols=135 Identities=20% Similarity=0.273 Sum_probs=120.0
Q ss_pred eEEcCCCccceEEEccCCHHHHHHHHHHhcccCCcEEEeeCCCCChHHHHHHHHHHHcCCeEEEeeeCCEEEEEcCCCCC
Q 030153 39 LTITGPTQLSGHVPISGSKNSSLCLLAATLLCSNSCLLHNVPTGLSDTKAMLSILRSLGAKIEFNERNKEILVNTDGVGR 118 (182)
Q Consensus 39 i~I~~~~~l~g~v~vpgsKs~a~~~laAA~La~g~~~I~n~~~~s~Dv~~~l~~L~~lGa~I~~~~~~~~l~I~~~~~~~ 118 (182)
++|++ ++++|+|++|||||.++|+|+||+|++|+++|+|++. ++|+..|+++|++||++|+ .+++.++|+|.+...
T Consensus 3 ~~i~~-~~l~G~v~ipgsKs~t~r~Llaa~La~g~t~I~n~~~-s~Dv~~~~~~L~~lG~~i~--~~~~~~~I~g~~~~~ 78 (427)
T 1rf6_A 3 LKTNI-RHLHGIIRVPGDKSISHRSIIFGSLAEGETKVYDILR-GEDVLSTMQVFRDLGVEIE--DKDGVITVQGVGMAG 78 (427)
T ss_dssp ECCCC-CCEEEEECCCBCHHHHHHHHHHHHHSBSEEEEESCCC-SHHHHHHHHHHHHTTCEEE--EETTEEEEECCCSSC
T ss_pred eEEeC-CCceEEEEcCCcHHHHHHHHHHHHHcCCCEEEccCCC-CHHHHHHHHHHHHcCCeEE--ecCCEEEEECCCCCC
Confidence 66766 4699999999999999999999999999999999999 9999999999999999999 767789999875444
Q ss_pred CCCChh--hhhhhhhHHHHHHHHhhhhCCeEEEecCCCCCCCCChHHHHHHHHHCCCEEEEc
Q 030153 119 VEPCLE--EMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGAAVEIS 178 (182)
Q Consensus 119 ~~~~~~--~~~~sgts~~~l~~lla~~~~~~~~~~G~~~l~~Rpi~~l~~~L~~lGa~v~~~ 178 (182)
+..+.+ .+++||+++||++++++.++ +.+.++|+++++.|||+.+++.|++|||++++.
T Consensus 79 ~~~p~~~id~~~sgt~~rll~a~la~~~-~~v~l~G~~~l~~Rpi~~~l~~L~~mGa~i~~~ 139 (427)
T 1rf6_A 79 LKAPQNALNMGNSGTSIRLISGVLAGAD-FEVEMFGDDSLSKRPMDRVTLPLKKMGVSISGQ 139 (427)
T ss_dssp CCCCSSCEECTTCHHHHHHHHHHGGGCS-SEEEEECCTTGGGSCCHHHHHHHHHTTCEEEEE
T ss_pred cCCCcceeeccccchHHHHHHHHHhcCC-cEEEEeCCCccCCCCHHHHHHHHHHCCCEEEEE
Confidence 444433 38899999999999997664 789999999999999999999999999999976
No 9
>2pqc_A 3-phosphoshikimate 1-carboxyvinyltransferase; inside-OUT alpha/beta barrel; HET: RC1; 1.60A {Agrobacterium SP} PDB: 2pqb_A* 2gg6_A* 2gg4_A* 2gga_A* 2ggd_A* 2pqd_A*
Probab=99.92 E-value=1.2e-24 Score=193.44 Aligned_cols=138 Identities=19% Similarity=0.224 Sum_probs=122.1
Q ss_pred ceEEcCCCccceEEEccCCHHHHHHHHHHhcccCCcEEEeeCCCCChHHHHHHHHHHHcCCeEEEeeeCCEEEEEcCCCC
Q 030153 38 TLTITGPTQLSGHVPISGSKNSSLCLLAATLLCSNSCLLHNVPTGLSDTKAMLSILRSLGAKIEFNERNKEILVNTDGVG 117 (182)
Q Consensus 38 ~i~I~~~~~l~g~v~vpgsKs~a~~~laAA~La~g~~~I~n~~~~s~Dv~~~l~~L~~lGa~I~~~~~~~~l~I~~~~~~ 117 (182)
-+.|+++.+++|+|++|||||+++++|++|+|++|+++|+|++. ++|+..++++|++||++|+ .+++.++|+|.++.
T Consensus 4 pl~i~~~~~l~G~v~ipgsKs~t~r~ll~A~La~g~t~i~n~~~-~~dv~~~~~~L~~lG~~i~--~~~~~~~I~g~~~~ 80 (445)
T 2pqc_A 4 PATARKSSGLSGTVRIPGDKSISHRSFMFGGLASGETRITGLLE-GEDVINTGKAMQAMGARIR--KEGDTWIIDGVGNG 80 (445)
T ss_dssp CEEEECCSCCEEEEECCBCHHHHHHHHHHHHHSEEEEEEESCCC-SHHHHHHHHHHHHTTCEEE--EETTEEEEEEECTT
T ss_pred eEEEcCCCcceEEEEcCCCHHHHHHHHHHHHhcCCcEEEccCCC-CHHHHHHHHHHHHCCCEEE--ecCCEEEEEccCCC
Confidence 37788877899999999999999998888999999999999999 9999999999999999999 77778999987654
Q ss_pred CCCCChh--hhhhhhhHHHHHHHHhhhhCCeEEEecCCCCCCCCChHHHHHHHHHCCCEEEEcC
Q 030153 118 RVEPCLE--EMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGAAVEISY 179 (182)
Q Consensus 118 ~~~~~~~--~~~~sgts~~~l~~lla~~~~~~~~~~G~~~l~~Rpi~~l~~~L~~lGa~v~~~~ 179 (182)
.+..+.. +++++||++||++++++.++ +.+.++|+++++.|||+.+++.|++|||++++.+
T Consensus 81 ~~~~p~~~~d~~~sgt~~r~l~~~l~~~~-~~v~l~G~~~l~~Rp~~~~l~~L~~~Ga~i~~~~ 143 (445)
T 2pqc_A 81 GLLAPEAPLDFGNAATGCRLTMGLVGVYD-FDSTFIGDASLTKRPMGRVLNPLREMGVQVKSED 143 (445)
T ss_dssp CCCCCSSCEECTTCHHHHHHHHHHHHTSS-SEEEEECCTTGGGSCCHHHHHHHHHTTCEEEEET
T ss_pred CCCCCCcccchhhhhHHHHHHHHHHhcCC-cEEEEECCccCCCCChHHHHHHHHHCCCEEEecc
Confidence 4444332 48999999999999997654 6899999999999999999999999999998754
No 10
>2o0b_A 3-phosphoshikimate 1-carboxyvinyltransferase; shikimate pathway, EPSP synthase, structural genomics; HET: S3P; 1.15A {Mycobacterium tuberculosis} PDB: 2o0d_A* 2o0e_A* 2o0x_A* 2o0z_A* 2o15_A 2bjb_A
Probab=99.89 E-value=3.1e-23 Score=185.19 Aligned_cols=129 Identities=24% Similarity=0.312 Sum_probs=112.9
Q ss_pred CCccceEEEccCCHHHHHHHHHHhcccC----CcEEEeeCCCCChHHHHHHHHHHHcCCeEEEeeeCCEEEEEcCCCCCC
Q 030153 44 PTQLSGHVPISGSKNSSLCLLAATLLCS----NSCLLHNVPTGLSDTKAMLSILRSLGAKIEFNERNKEILVNTDGVGRV 119 (182)
Q Consensus 44 ~~~l~g~v~vpgsKs~a~~~laAA~La~----g~~~I~n~~~~s~Dv~~~l~~L~~lGa~I~~~~~~~~l~I~~~~~~~~ 119 (182)
+++++|+|++|||||.++|+|++|+|++ |+++|+|++. ++|+..++++|++||++|+ .+++.++|+|.+. ..
T Consensus 10 ~~~l~G~v~vpgsKs~s~R~l~~aaLa~~~~~g~~~i~~~l~-~~D~~~~~~~L~~lGa~i~--~~~~~l~I~g~~~-~l 85 (450)
T 2o0b_A 10 PTPVRATVTVPGSKSQTNRALVLAALAAAQGRGASTISGALR-SRDTELMLDALQTLGLRVD--GVGSELTVSGRIE-PG 85 (450)
T ss_dssp SSCCEEEECCCBCHHHHHHHHHHHHHHHHTTCCCEEEETCCC-SHHHHHHHHHHHHTTCEEE--CSSSCEEEESCCC-CC
T ss_pred CCCeEEEEEccCcHHHHHHHHHHHHhcCCCCCCeEEEecCCC-chHHHHHHHHHHHcCCEEE--EeCCEEEEECCCC-Cc
Confidence 4679999999999999999999999999 9999999999 9999999999999999999 6666899998642 11
Q ss_pred CCChhhhhhhhhHHHHHHHHhhhhCCeEEEecCCCCCCCCChHHHHHHHHHCCCEEEE
Q 030153 120 EPCLEEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGAAVEI 177 (182)
Q Consensus 120 ~~~~~~~~~sgts~~~l~~lla~~~~~~~~~~G~~~l~~Rpi~~l~~~L~~lGa~v~~ 177 (182)
....-.++++|+++||++|+++ ++++.+.++|+|+|++|||+.+++.|++||++|+.
T Consensus 86 ~~~~i~~g~sgts~R~l~~lla-~~~~~~~l~G~~~l~~RPi~~~~~~L~~lGa~i~~ 142 (450)
T 2o0b_A 86 PGARVDCGLAGTVLRFVPPLAA-LGSVPVTFDGDQQARGRPIAPLLDALRELGVAVDG 142 (450)
T ss_dssp TTCEEECTTCHHHHHHHHHHHT-TSSSEEEEECCGGGGGSCCHHHHHHHHHTTCEEEC
T ss_pred CceeeeeccchhHHHHHHHHHh-cCCceEEEeCCCcCCCCCHHHHHHHHHHCCCEEEc
Confidence 1111137899999999999998 66778999999999999999999999999999964
No 11
>3rmt_A 3-phosphoshikimate 1-carboxyvinyltransferase 1; structural genomics, protein structure initiative; 2.80A {Bacillus halodurans}
Probab=99.59 E-value=3.2e-15 Score=133.70 Aligned_cols=142 Identities=21% Similarity=0.304 Sum_probs=100.5
Q ss_pred ceEEcCCCccce-EEEccCCHHHHHHHHHHhcc-cCCcEEEeeCCCCChHHHHHHHHHHHcCCeEEEeeeC-------CE
Q 030153 38 TLTITGPTQLSG-HVPISGSKNSSLCLLAATLL-CSNSCLLHNVPTGLSDTKAMLSILRSLGAKIEFNERN-------KE 108 (182)
Q Consensus 38 ~i~I~~~~~l~g-~v~vpgsKs~a~~~laAA~L-a~g~~~I~n~~~~s~Dv~~~l~~L~~lGa~I~~~~~~-------~~ 108 (182)
.+.|+|.+++.+ +++||||.|+|.++++||++ ++++++|+|+...... ..++++|++||++|+++.+. ..
T Consensus 217 ~i~I~g~~~l~~~~~~V~~D~s~Aa~~l~aaai~~gg~v~i~~~~~~~~~-~~il~~L~~mGa~i~~~~~~~~~ge~~~~ 295 (455)
T 3rmt_A 217 TVSIEGGQMLTGQHVVVPGDISSAAFFLVAGAMVPHSRITLTNVGINPTR-AGILEVLKQMGATLAMENERVQGGEPVAD 295 (455)
T ss_dssp EEEECSCCCCBCCEEECCBCHHHHHHHHHHHHHSTTEEEEEEEEECCTTT-THHHHHHHHTTCEEEEEEEEEETTEEEEE
T ss_pred EEEEcCCccccCCeeECCCCHHHHHHHHHHHHhcCCCEEEECCCCCchhH-HHHHHHHHHcCCEEEEcCCcccCCccceE
Confidence 477888777776 69999999999989998888 6889999999530222 45899999999999942211 13
Q ss_pred EEEEcCCCCCCCCChhhhhhhhhHHHHHHHHhhhhCCeEEEecCCCCCC---CCChHHHHHHHHHCCCEEEEcCcc
Q 030153 109 ILVNTDGVGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIG---ERPVDLYVRGLRALGAAVEISYVF 181 (182)
Q Consensus 109 l~I~~~~~~~~~~~~~~~~~sgts~~~l~~lla~~~~~~~~~~G~~~l~---~Rpi~~l~~~L~~lGa~v~~~~~~ 181 (182)
++|.+..+++..++...++...+....+ ++++.+.++++++.|..+++ ++|+..++++|++||+++++.+|.
T Consensus 296 i~v~~~~l~~~~i~~~~~P~~~D~~p~l-avla~~a~G~s~I~~~~~LrvkEsdRi~a~~~eL~kmGa~i~~~~d~ 370 (455)
T 3rmt_A 296 LTIETSVLQGVEIGGDIIPRLIDEIPII-AVLATQASGRTVIKDAEELKVKETNRIDTVVSELTKLGASIHATDDG 370 (455)
T ss_dssp EEEECCCCBCCCEETTHHHHHGGGHHHH-HHHHHTSBSCEEEEC-----CHHHHHHHHHHHHHHHTTCCEEEETTE
T ss_pred EEEecCCceeEEEeCccCCchHHHHHHH-HHHHHhCCCcEEEEccccccccchhHHHHHHHHHHHCCCEEEEECCE
Confidence 8888766666655544333322334444 33444677888899888776 489999999999999999987653
No 12
>3slh_A 3-phosphoshikimate 1-carboxyvinyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: S3P GPJ SKM PGE 1PE PG4; 1.70A {Coxiella burnetii} PDB: 3roi_A* 4egr_A* 4gfp_A 3tr1_A
Probab=99.57 E-value=1.6e-14 Score=128.61 Aligned_cols=140 Identities=19% Similarity=0.272 Sum_probs=104.0
Q ss_pred ceEEcCCCccce-EEEccCCHHHHHHHHHHhccc-CCcEEEeeCCCCChHHHHHHHHHHHcCCeEEEeeeCC--------
Q 030153 38 TLTITGPTQLSG-HVPISGSKNSSLCLLAATLLC-SNSCLLHNVPTGLSDTKAMLSILRSLGAKIEFNERNK-------- 107 (182)
Q Consensus 38 ~i~I~~~~~l~g-~v~vpgsKs~a~~~laAA~La-~g~~~I~n~~~~s~Dv~~~l~~L~~lGa~I~~~~~~~-------- 107 (182)
.+.|++.+++.+ +++||||.|+|.++++|++++ +++++|+|+...... ..++++|++|||+|++ +++
T Consensus 217 ~i~I~g~~~l~~~~~~V~~D~ssAa~~l~aaal~~g~~v~l~g~~~~~~~-~~~l~~L~~mGa~i~~--~~~~~~~~e~~ 293 (441)
T 3slh_A 217 SICVSGGGKLKANDISIPGDISSAAFFIVAATITPGSAIRLCRVGVNPTR-LGVINLLKMMGADIEV--THYTEKNEEPT 293 (441)
T ss_dssp CEEEETTCCCBCCCEECCBCHHHHHHHHHHHHHSTTCEEEEEEEECCGGG-CHHHHHHHHHTCEEEE--EEEEEETTEEE
T ss_pred EEEEcCCCccccceEEeCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCccH-HHHHHHHHHcCCEEEE--cCCccccCccc
Confidence 477888766776 699999999999999999998 789999999531222 3579999999999994 332
Q ss_pred -EEEEEcCCCCCCCCChhhhhhhhhHHHHHHHHhhhhCCeEEEecCCCCCC---CCChHHHHHHHHHCCCEEEEcCcc
Q 030153 108 -EILVNTDGVGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIG---ERPVDLYVRGLRALGAAVEISYVF 181 (182)
Q Consensus 108 -~l~I~~~~~~~~~~~~~~~~~sgts~~~l~~lla~~~~~~~~~~G~~~l~---~Rpi~~l~~~L~~lGa~v~~~~~~ 181 (182)
.++|.+..+++..++.+.+....+....+ .+++++.++++++.|..++| ++|+..++++|++||+++++.+|.
T Consensus 294 ~~i~v~~~~l~g~~i~~~~~p~~~D~~p~l-~~~aa~A~G~t~I~~i~~lR~kEsdRi~~l~~eL~kmGa~i~~~~d~ 370 (441)
T 3slh_A 294 ADITVRHARLKGIDIPPDQVPLTIDEFPVL-LIAAAVAQGKTVLRDAAELRVKETDRIAAMVDGLQKLGIAAESLPDG 370 (441)
T ss_dssp EEEEEECCCCBCCEECGGGHHHHGGGHHHH-HHHHHTSBSEEEECSCGGGGGSSSCHHHHHHHHHHHTTCEEEEETTE
T ss_pred eEEEEecCCCCceEEecccCCCcHHHHHHH-HHHHHhCCCeEEEEeccccccccchHHHHHHHHHHHCCCEEEEeCCE
Confidence 47787766666666654333322333444 33444677888999877775 489999999999999999986653
No 13
>3nvs_A 3-phosphoshikimate 1-carboxyvinyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: S3P SKM GPJ EPE; 1.02A {Vibrio cholerae} PDB: 1g6s_A* 1g6t_A* 1x8r_A* 1x8t_A* 2aa9_A* 2aay_A* 2pq9_A* 1eps_A 1mi4_A* 3fjz_A* 3fjx_A* 2qfs_A* 2qft_A* 2qfq_A* 2qfu_A* 3fk0_A* 3fk1_A* 1q36_A* 3ti2_A* 1p88_A ...
Probab=99.53 E-value=3e-14 Score=127.02 Aligned_cols=137 Identities=17% Similarity=0.230 Sum_probs=101.4
Q ss_pred ceEEcCCCccce--EEEccCCHHHHHHHHHHhcccCCcEEEeeCCCCC--hHHHHHHHHHHHcCCeEEEeeeCCEEEEEc
Q 030153 38 TLTITGPTQLSG--HVPISGSKNSSLCLLAATLLCSNSCLLHNVPTGL--SDTKAMLSILRSLGAKIEFNERNKEILVNT 113 (182)
Q Consensus 38 ~i~I~~~~~l~g--~v~vpgsKs~a~~~laAA~La~g~~~I~n~~~~s--~Dv~~~l~~L~~lGa~I~~~~~~~~l~I~~ 113 (182)
.++|++.+.+.+ ++.||+|.++|.++++||++++|+++|+|+.... .| ..++++|++|||+|+ .+++.++|.+
T Consensus 247 ~i~I~g~~~l~~~~~~~v~~D~s~As~~l~aaal~~g~v~i~~~~~~~~~~D-~~i~~~L~~mGa~i~--~~~~~i~v~~ 323 (450)
T 3nvs_A 247 EFVIPAGQSYVSPGQFLVEGDASSASYFLAAAAIKGGEVKVTGIGKNSIQGD-IQFADALEKMGAQIE--WGDDYVIARR 323 (450)
T ss_dssp EEEECTTCCCBCCSEEECCBCHHHHHHHHHHHHHHCSEEEEESCCTTCSCGG-GGHHHHHHHHTCEEE--ECSSEEEEEC
T ss_pred EEEEcCCccccCCcceEecCCHHHHHHHHHHHHhcCCeEEEccCCcccccch-HHHHHHHHHcCCeEE--EeCCEEEEec
Confidence 377877666653 8999999999999999999999999999997511 23 257899999999999 8888899987
Q ss_pred CCCCCCCCChhhhhhhhhHHHHHHHHhhhhCCeEEEecCCCCCC---CCChHHHHHHHHHCCCEEEEcCcc
Q 030153 114 DGVGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIG---ERPVDLYVRGLRALGAAVEISYVF 181 (182)
Q Consensus 114 ~~~~~~~~~~~~~~~sgts~~~l~~lla~~~~~~~~~~G~~~l~---~Rpi~~l~~~L~~lGa~v~~~~~~ 181 (182)
..+++..++.+..+.. ...+ .++|+++++++++.|..++| ++|+..+.+.|++||++|++.+|.
T Consensus 324 ~~L~g~~i~~~~~PD~---~~~l-~~~aa~A~G~t~I~~~~~lR~ke~dRi~~l~~eL~kmGa~I~~~~d~ 390 (450)
T 3nvs_A 324 GELNAVDLDFNHIPDA---AMTI-ATTALFAKGTTAIRNVYNWRVKETDRLAAMATELRKVGATVEEGEDF 390 (450)
T ss_dssp CCCBCCEEECTTCTTT---HHHH-HHHGGGSBSCEEEESCGGGGGSSSCHHHHHHHHHHHTTCEEEECSSE
T ss_pred CCcCcEEeecCCCcCH---HHHH-HHHHHHCCCCEEEechhhccCCCchHHHHHHHHHHHcCCEEEEcCCE
Confidence 6665544432212221 2222 33445666777788877664 688999999999999999977654
No 14
>2o0b_A 3-phosphoshikimate 1-carboxyvinyltransferase; shikimate pathway, EPSP synthase, structural genomics; HET: S3P; 1.15A {Mycobacterium tuberculosis} PDB: 2o0d_A* 2o0e_A* 2o0x_A* 2o0z_A* 2o15_A 2bjb_A
Probab=99.52 E-value=4.4e-14 Score=125.99 Aligned_cols=137 Identities=14% Similarity=0.150 Sum_probs=103.2
Q ss_pred ceEEcCCCccce-EEEccCCHHHHHHHHHHhcccCCcEEEeeCCCCC-hHHHHHHHHHHHcCCeEEEeeeCCEEEEEcCC
Q 030153 38 TLTITGPTQLSG-HVPISGSKNSSLCLLAATLLCSNSCLLHNVPTGL-SDTKAMLSILRSLGAKIEFNERNKEILVNTDG 115 (182)
Q Consensus 38 ~i~I~~~~~l~g-~v~vpgsKs~a~~~laAA~La~g~~~I~n~~~~s-~Dv~~~l~~L~~lGa~I~~~~~~~~l~I~~~~ 115 (182)
.+.|++ ++++| ++.||+|.+.|.++++||++++|+++|+|+.... ...+.+++.|++||++|+ ..++.++|.+..
T Consensus 221 ~i~I~g-~~l~g~~~~v~~D~s~A~~~laaaa~~~g~v~i~~v~~~~~q~~~~i~~~L~~mGa~i~--~~~d~i~v~~~~ 297 (450)
T 2o0b_A 221 RWQVRP-GPVAARRWDIEPDLTNAVAFLSAAVVSGGTVRITGWPRVSVQPADHILAILRQLNAVVI--HADSSLEVRGPT 297 (450)
T ss_dssp EEEECC-CCCCCCCEECCBCHHHHHHHHHHHHHHTCEEEETTCCSSCSSCHHHHHHHHHHTTCEEE--EETTEEEEECCS
T ss_pred EEEEEC-CCCcCceEEcCCCHHHHHHHHHHHHhcCCeEEECCCCcccccchHHHHHHHHHcCCeEE--EcCCEEEEecCC
Confidence 477776 46777 7999999999999999999999999999987511 111358999999999999 778899998754
Q ss_pred -CCCCCCChhhhhhhhhHHHHHHHHhhhhCC--eEEEecCCCCCC---CCChHHHHHHHHHCCCEEEEcCcc
Q 030153 116 -VGRVEPCLEEMRKIRGGFFVIGPLLARFGE--AVVGLPGGCDIG---ERPVDLYVRGLRALGAAVEISYVF 181 (182)
Q Consensus 116 -~~~~~~~~~~~~~sgts~~~l~~lla~~~~--~~~~~~G~~~l~---~Rpi~~l~~~L~~lGa~v~~~~~~ 181 (182)
+++..++.... .+....+ ++++.+.+ +++++.|..+++ ++|+..+++.|++||+++++.+|.
T Consensus 298 ~l~g~~i~~~~~---~D~~p~l-avla~~a~~~G~s~I~~~~~lrvkEtdRi~~~~~eL~klGa~i~~~~d~ 365 (450)
T 2o0b_A 298 GYDGFDVDLRAV---GELTPSV-AALAALASPGSVSRLSGIAHLRGHETDRLAALSTEINRLGGTCRETPDG 365 (450)
T ss_dssp CCCCCEEECTTC---GGGHHHH-HHHHHTSSTTCEEEEESCGGGGGSSSCHHHHHHHHHHHTTCEEEEETTE
T ss_pred CcceeEEeCCCC---HHHHHHH-HHHHHhCCCCCcEEEECCcccccccchhHHHHHHHHHHCCCeEEEECCE
Confidence 54443322111 1222333 44445677 889999988875 599999999999999999987653
No 15
>1rf6_A 5-enolpyruvylshikimate-3-phosphate synthase; shikimate pathway, EPSP synthase, glyphosate, PEP, transferase; HET: GPJ S3P; 1.90A {Streptococcus pneumoniae} SCOP: d.68.2.2 PDB: 1rf5_A 1rf4_A*
Probab=99.50 E-value=1.6e-13 Score=121.38 Aligned_cols=142 Identities=23% Similarity=0.401 Sum_probs=104.6
Q ss_pred ceEEcCCCccce-EEEccCCHHHHHHHHHHhcccCCc-EEEeeCCCCChHHHHHHHHHHHcCCeEEEee--eC---CEEE
Q 030153 38 TLTITGPTQLSG-HVPISGSKNSSLCLLAATLLCSNS-CLLHNVPTGLSDTKAMLSILRSLGAKIEFNE--RN---KEIL 110 (182)
Q Consensus 38 ~i~I~~~~~l~g-~v~vpgsKs~a~~~laAA~La~g~-~~I~n~~~~s~Dv~~~l~~L~~lGa~I~~~~--~~---~~l~ 110 (182)
.+.|+|.++++| ++.+++|.+.|.++++|+++++|. ++|+|+........ +++.|++||++|+++. .+ +.++
T Consensus 213 ~i~I~g~~~l~g~~~~v~~D~~~A~~~~~Aa~~~~g~~v~i~~~~~~~~~~~-~~~~L~~mGa~i~~~~~~~~~~~~~i~ 291 (427)
T 1rf6_A 213 KITVQGPQKLTGQKVVVPGDISSAAFWLVAGLIAPNSRLVLQNVGINETRTG-IIDVIRAMGGKLEITEIDPVAKSATLI 291 (427)
T ss_dssp EEEEEECCCCBCCEEECCBCHHHHHHHHHHHHHSTTEEEEEEEEECCTTTCH-HHHHHHHTTCEEEEEEEETTTTEEEEE
T ss_pred EEEEcCCcccCCCeEEcCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCChhH-HHHHHHHcCCcEEEccccCCCCcceEE
Confidence 467887767776 799999999999999999999887 99999862122222 8999999999999411 14 5688
Q ss_pred EEcCCCCCCCCChhhhhhhhhHHHHHHHHhhhhCCeEEEecCCCCCC---CCChHHHHHHHHHCCCEEEEcCcc
Q 030153 111 VNTDGVGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIG---ERPVDLYVRGLRALGAAVEISYVF 181 (182)
Q Consensus 111 I~~~~~~~~~~~~~~~~~sgts~~~l~~lla~~~~~~~~~~G~~~l~---~Rpi~~l~~~L~~lGa~v~~~~~~ 181 (182)
|.+..+++..++...++...+....+ ++++.+.++++.+.|..+++ ++|+..++++|++||+++++.+|.
T Consensus 292 v~~~~l~~~~i~~~~~p~~~D~~p~l-~~la~~a~G~s~i~~~~~lr~kEsdR~~~~~~eL~~lGa~i~~~~d~ 364 (427)
T 1rf6_A 292 VESSDLKGTEICGALIPRLIDELPII-ALLATQAQGVTVIKDAEELKVKETDRIQVVADALNSMGADITPTADG 364 (427)
T ss_dssp EECCCCBCCEECTTSGGGTGGGHHHH-HHHHHTSBEEEEECSCGGGGGSSSCTTHHHHHHHHTTTCCEEEETTE
T ss_pred EeCCCCCcEEeccccCCChHHHHHHH-HHHHHhCCCcEEEEcccccccchhHHHHHHHHHHHHCCCEEEEECCE
Confidence 87655655555443233222344455 34445788899999977776 499999999999999999987653
No 16
>2yvw_A UDP-N-acetylglucosamine 1-carboxyvinyltransferase; peptidoglycan, structu genomics, NPPSFA; HET: EPU; 1.81A {Aquifex aeolicus} PDB: 3swg_A*
Probab=99.47 E-value=4.8e-13 Score=118.24 Aligned_cols=130 Identities=14% Similarity=0.211 Sum_probs=96.5
Q ss_pred eEEcCCCccce-EEEcc-CCHHHHHHHHHHhcccCCcEEEeeCCCCChHHHHHHHHHHHcCCeEEEeeeC-CEEEEEcC-
Q 030153 39 LTITGPTQLSG-HVPIS-GSKNSSLCLLAATLLCSNSCLLHNVPTGLSDTKAMLSILRSLGAKIEFNERN-KEILVNTD- 114 (182)
Q Consensus 39 i~I~~~~~l~g-~v~vp-gsKs~a~~~laAA~La~g~~~I~n~~~~s~Dv~~~l~~L~~lGa~I~~~~~~-~~l~I~~~- 114 (182)
+.++. ..+.| ++++| +|++.+.+++.||+|++|+++|+|++. .+|+..++++|++||++|+ .++ +.+ |.|.
T Consensus 152 ~~i~~-~~l~g~~i~~~~~S~~~~s~lllaa~la~g~t~i~~~~~-~~~i~~t~~~L~~~Ga~i~--~~~~~~i-I~g~~ 226 (425)
T 2yvw_A 152 VYVNL-KEKRRVHFKFDLVTVTGTENALLYLASVPEESILENIAL-EPEVMDLIEVLKKMGAHVK--VEGRSAY-VKGSE 226 (425)
T ss_dssp EEEEC-SSCCCCEEECSSCCHHHHHHHHHHHTTCSSEEEEESCCC-CHHHHHHHHHHHHTTCEEE--EETTEEE-EECCS
T ss_pred EEEEe-cCccceEEecccccHHHHHHHHHHHHhcCCCEEEeCCCC-CchHHHHHHHHHHCCCeEE--EcCCEEE-EeCCC
Confidence 34443 34777 89999 899999999999999999999999988 8999999999999999999 665 567 8874
Q ss_pred CCCCCCCChhhhhhhhhHHHHHHHHhhhhCCeEEEecCCCCCCCCChHHHHHHHHHCCCEEEEcCc
Q 030153 115 GVGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGAAVEISYV 180 (182)
Q Consensus 115 ~~~~~~~~~~~~~~sgts~~~l~~lla~~~~~~~~~~G~~~l~~Rpi~~l~~~L~~lGa~v~~~~~ 180 (182)
.+++.... ...+.+.+++++++++++ .+.+++.|. ..+|++.+++.|++||++++..++
T Consensus 227 ~l~~~~~~-v~~D~s~A~t~l~aaal~---~g~v~l~g~---~~~~~~~l~~~L~~mGa~i~~~~~ 285 (425)
T 2yvw_A 227 NLKGFTHS-VIPDRIEAGTFMVGAVLT---DGEILLENA---RINHLRAVVEKLKLIGGEVVEENG 285 (425)
T ss_dssp SCCCCEEE-CCBCHHHHHHHHHHHHHT---TCEEEEESC---CGGGCHHHHHHHHHHTEEEEEETT
T ss_pred ccCCcccc-ccCchhHHHHHHHHHHhC---CCcEEEeCC---CchHHHHHHHHHHHCCCEEEEcCC
Confidence 34332211 011234444444433332 356888884 478999999999999999987654
No 17
>2pqc_A 3-phosphoshikimate 1-carboxyvinyltransferase; inside-OUT alpha/beta barrel; HET: RC1; 1.60A {Agrobacterium SP} PDB: 2pqb_A* 2gg6_A* 2gg4_A* 2gga_A* 2ggd_A* 2pqd_A*
Probab=99.41 E-value=1.8e-12 Score=115.05 Aligned_cols=141 Identities=20% Similarity=0.300 Sum_probs=101.4
Q ss_pred ceEEcCCCccce-EEEccCCHHHHHHHHHHhcccCCc-EEEeeCCCCChHHHHHHHHHHHcCCeEEEee---eC----CE
Q 030153 38 TLTITGPTQLSG-HVPISGSKNSSLCLLAATLLCSNS-CLLHNVPTGLSDTKAMLSILRSLGAKIEFNE---RN----KE 108 (182)
Q Consensus 38 ~i~I~~~~~l~g-~v~vpgsKs~a~~~laAA~La~g~-~~I~n~~~~s~Dv~~~l~~L~~lGa~I~~~~---~~----~~ 108 (182)
.+.|+|.++++| .+.+++|.+.+.++++|+++++|. ++|+|+......-. +++.|++|||+|++.. .+ ..
T Consensus 220 ~~~I~g~~~l~~~~~~v~~D~s~a~~~l~aa~~~~g~~v~i~~~~~~~~~~~-~~~~L~~mGa~i~~~~~~~~~g~~~~~ 298 (445)
T 2pqc_A 220 TIRLEGRGKLTGQVIDVPGDPSSTAFPLVAALLVPGSDVTILNVLMNPTRTG-LILTLQEMGADIEVINPRLAGGEDVAD 298 (445)
T ss_dssp EEEEETTCCCBCCEEECCBCHHHHHHHHHHHHHSTTCEEEEEEEECCGGGCH-HHHHHHHHTCEEEEEEEEEETTEEEEE
T ss_pred EEEEeCCccccCceeEcCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcch-HHHHHHHcCCeEEEccccccCCCccCc
Confidence 466777666776 799999999999899999898876 99999874122222 8999999999999311 12 46
Q ss_pred EEEEcCCCCCCCCChhhhhhhhhHHHHHHHHhhhhCCeEEEecCCCCCC---CCChHHHHHHHHHCCCEEEEcCc
Q 030153 109 ILVNTDGVGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIG---ERPVDLYVRGLRALGAAVEISYV 180 (182)
Q Consensus 109 l~I~~~~~~~~~~~~~~~~~sgts~~~l~~lla~~~~~~~~~~G~~~l~---~Rpi~~l~~~L~~lGa~v~~~~~ 180 (182)
++|.+..+++..++...++.--+....+ .+++.+.++++++.+..+++ ++|++.+++.|++||++++..+|
T Consensus 299 i~v~~~~l~~~~i~~~~~p~~~D~~p~l-~~~a~~a~G~s~i~~~~~lr~kEsdRi~~~~~eL~~~Ga~i~~~~d 372 (445)
T 2pqc_A 299 LRVRSSTLKGVTVPEDRAPSMIDEYPIL-AVAAAFAEGATVMNGLEELRVKESDRLSAVANGLKLNGVDCDEGET 372 (445)
T ss_dssp EEEECCCCBCCEECGGGGGGTGGGHHHH-HHHHTTSBSEEEECCCGGGGGSSSCHHHHHHHHHHHTTCEEEECSS
T ss_pred EEEeCCCCCceEeccccCCchHHHHHHH-HHHHHhCCCcEEEEcccccccccchHHHHHHHHHHHCCCEEEEcCC
Confidence 8888755655555443233222344444 44445778889999877654 49999999999999999997654
No 18
>1ejd_A MURA, EPT, UDP-N-acetylglucosamine enolpyruvyltransferase; inside-OUT alpha/beta barrel; 1.55A {Enterobacter cloacae} SCOP: d.68.2.2 PDB: 1ejc_A 1eyn_A* 1ybg_A* 3kqa_A* 3lth_A* 3spb_A 3swq_A* 3upk_A* 1naw_A 1dlg_A 1ryw_A* 1q3g_A* 3su9_A* 3swi_A* 3v4t_A* 3v5v_A* 3swa_A* 1uae_A* 3kqj_A* 3kr6_A* ...
Probab=99.41 E-value=2e-12 Score=113.98 Aligned_cols=136 Identities=21% Similarity=0.160 Sum_probs=99.3
Q ss_pred ceEEcCCCccce-EEEccCCHHHHHHHHHHhcccCCcEEEeeCCCCChHHHHHHHHHHHcCCeEEEeeeCCEEEEEc--C
Q 030153 38 TLTITGPTQLSG-HVPISGSKNSSLCLLAATLLCSNSCLLHNVPTGLSDTKAMLSILRSLGAKIEFNERNKEILVNT--D 114 (182)
Q Consensus 38 ~i~I~~~~~l~g-~v~vpgsKs~a~~~laAA~La~g~~~I~n~~~~s~Dv~~~l~~L~~lGa~I~~~~~~~~l~I~~--~ 114 (182)
.+.|+|.++++| ++.+++|.+.|.++++|+++++++++|+|+.. +....+++.|++||++|+ ..++.++|.+ .
T Consensus 212 ~i~I~g~~~l~g~~~~v~~D~s~A~~~~~aa~~~~g~v~i~~~~~--~~~~~~~~~L~~mGa~i~--~~~~~i~v~~~~~ 287 (419)
T 1ejd_A 212 RITIEGVERLGGGVYRVLPDRIETGTFLVAAAISGGKIVCRNAQP--DTLDAVLAKLREAGADIE--TGEDWISLDMHGK 287 (419)
T ss_dssp EEEEECCSCBCCEEEECCBCHHHHHHHHHHHHTTTCEEEEESCCG--GGCHHHHHHHHHTTCEEE--ECSSEEEEECTTC
T ss_pred EEEEeCCCcccccEEEeeCCHHHHHHHHHHHHhcCCeEEEeCcCc--ccHHHHHHHHHHCCCEEE--EcCCEEEEEecCC
Confidence 477888777776 79999999999989999989999999999985 556679999999999999 7778899987 4
Q ss_pred CCCCCCCChhhhhh-hhhHHHHHHHHhhhhCCeEEEecCCCCCCCCChHHHHHHHHHCCCEEEEcCcc
Q 030153 115 GVGRVEPCLEEMRK-IRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGAAVEISYVF 181 (182)
Q Consensus 115 ~~~~~~~~~~~~~~-sgts~~~l~~lla~~~~~~~~~~G~~~l~~Rpi~~l~~~L~~lGa~v~~~~~~ 181 (182)
.+++..++...++. ..+....+ ++++++.++++++.+ .+.+.|++. +++|++||+++++.+|.
T Consensus 288 ~l~~~~i~~~~~p~~~~D~~p~l-a~la~~a~g~s~i~~--~i~~~R~~~-~~eL~~lG~~i~~~~d~ 351 (419)
T 1ejd_A 288 RPKAVTVRTAPHPAFPTDMQAQF-TLLNLVAEGTGVITE--TIFENRFMH-VPELIRMGAHAEIESNT 351 (419)
T ss_dssp CCBCCCEECCSTTSCCGGGHHHH-HHHHHTSBSEEEEEC--CSCSSCCTH-HHHHHHTTCEEEEETTE
T ss_pred CccceEEeCCCCCCCcHHHHHHH-HHHHHhCCCcEEEEc--cchHhHHHH-HHHHHHCCCEEEEECCE
Confidence 45444333211111 11234444 344457778888885 244455554 88899999999987653
No 19
>3r38_A UDP-N-acetylglucosamine 1-carboxyvinyltransferase; biosynthesis and degradation of murein sacculus and peptidog infectious diseases; 2.23A {Listeria monocytogenes} PDB: 3sg1_A*
Probab=99.34 E-value=1.2e-11 Score=110.30 Aligned_cols=129 Identities=15% Similarity=0.217 Sum_probs=92.8
Q ss_pred eEEcCCCccce-EEEccCC-HHHHHHHHHHhcccCCcEEEeeCCCCChHHHHHHHHHHHcCCeEEEeeeC-CEEEEEcCC
Q 030153 39 LTITGPTQLSG-HVPISGS-KNSSLCLLAATLLCSNSCLLHNVPTGLSDTKAMLSILRSLGAKIEFNERN-KEILVNTDG 115 (182)
Q Consensus 39 i~I~~~~~l~g-~v~vpgs-Ks~a~~~laAA~La~g~~~I~n~~~~s~Dv~~~l~~L~~lGa~I~~~~~~-~~l~I~~~~ 115 (182)
+.+++. .+.| ++++|.+ .....++|+||+|++|+++|+|++. ..|+..++++|++||++|+ .++ +.++|.|.+
T Consensus 169 ~~i~~~-~l~g~~~~l~~~S~q~~s~lLlAa~la~G~t~I~~~~~-~p~i~~t~~~L~~~Ga~I~--~~~~~~i~I~g~~ 244 (454)
T 3r38_A 169 IEATAE-KLVGAKVYLDFPSVGATQNIMMAATLAEGTTVIENVAR-EPEIVDLANFLNQMGARVI--GAGTEVIRIEGVK 244 (454)
T ss_dssp EEEECS-SCBCCEEECSSCCHHHHHHHHHHHTTSBSEEEEESCCC-CHHHHHHHHHHHHTTCCEE--CTTSSEEEEECCS
T ss_pred EEEEEc-CccCcEEEecCCCHHHHHHHHHHHhcCCCcEEEEcCCC-CcHHHHHHHHHHHCCCCEE--ECCCeEEEEecCc
Confidence 445543 3555 6887753 4566688888999999999999987 8999999999999999999 665 589999853
Q ss_pred -CCC--CCCChhhhhhhhhHHHHHHHHhhhhCCeEEEecCCCCCCCCChHHHHHHHHHCCCEEEEcCc
Q 030153 116 -VGR--VEPCLEEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGAAVEISYV 180 (182)
Q Consensus 116 -~~~--~~~~~~~~~~sgts~~~l~~lla~~~~~~~~~~G~~~l~~Rpi~~l~~~L~~lGa~v~~~~~ 180 (182)
+.+ +.++.| .+.+++++++++++ .+.+++.| +..||++.+++.|++||++++..++
T Consensus 245 ~l~~~~~~v~~D---~s~A~~~l~aaal~---gg~v~i~g---~~~~~~~~i~~~L~~mGa~i~~~~~ 303 (454)
T 3r38_A 245 ELTATEHSIIPD---RIEAGTFMIAAAIT---GGNVLIED---AVPEHISSLIAKLEEMGVQIIEEEN 303 (454)
T ss_dssp CEECCEEECCBC---HHHHHHHHHHHHHT---TCEEEEES---CCGGGGHHHHHHHHHTTCEEEEC--
T ss_pred cccccccccCCC---hhHHHHHHHHHHHc---CCcEEEcC---CCchHHHHHHHHHHHCCCEEEecCC
Confidence 333 223332 33344444444443 35677776 4678999999999999999987654
No 20
>4fqd_A NIKO protein; beta/alpha inverse barrel, enolpyruvyl transferase, fosfomyc binding, transferase; 2.50A {Streptomyces tendae}
Probab=99.24 E-value=1.3e-11 Score=110.78 Aligned_cols=138 Identities=14% Similarity=0.154 Sum_probs=94.2
Q ss_pred ceEEcCC---Cccce-EEEccCCHHHHHHHHHHhcc-cCCcEEEeeCCCCC--hHHHHHHHHHHHcCCeEEEeeeCCEEE
Q 030153 38 TLTITGP---TQLSG-HVPISGSKNSSLCLLAATLL-CSNSCLLHNVPTGL--SDTKAMLSILRSLGAKIEFNERNKEIL 110 (182)
Q Consensus 38 ~i~I~~~---~~l~g-~v~vpgsKs~a~~~laAA~L-a~g~~~I~n~~~~s--~Dv~~~l~~L~~lGa~I~~~~~~~~l~ 110 (182)
.+.|++. +.+.+ +++||+|.+.|.++++|+++ ++|+++|+|++..+ .+...++++|++|||+|+ ..++.++
T Consensus 242 ~i~I~g~g~~~~l~~~~~~V~~D~s~Ag~fl~aaal~~gg~v~l~g~~~~s~~~~~~~i~~~L~~mGa~i~--~~~~~i~ 319 (479)
T 4fqd_A 242 TWVIHGRGPESLHRPVDVTLIPDLIEVVTWICAGVLLADEPLRITGPGIDRAVHALAPEFDLLDRMGVRVD--VGADEVT 319 (479)
T ss_dssp EEEEEEECGGGCCCCEEEECCBCHHHHHHHHHHHHHHBSSCEEEECTTHHHHHHHTHHHHHHHHHHTCCEE--ECSSEEE
T ss_pred EEEEeCCCCCCccCCCceEeCCChHhHHHHHHHHHHcCCCeEEEeCCCCccccCchHHHHHHHHHCCCEEE--EcCCeEE
Confidence 4777775 55665 69999999988888888888 88999999998401 244568999999999999 7778899
Q ss_pred EEc--CCCCCCCCChhhhhhhhhHHHHHHHHhhhhCCeEEEecCCCCCCCCChHHHHHHHHHCCCEEEEcCcc
Q 030153 111 VNT--DGVGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGAAVEISYVF 181 (182)
Q Consensus 111 I~~--~~~~~~~~~~~~~~~sgts~~~l~~lla~~~~~~~~~~G~~~l~~Rpi~~l~~~L~~lGa~v~~~~~~ 181 (182)
|.+ ..+++..++....+-..+....+ .+++.+.++.+++.+. +.+.|+ .+++.|++||+++++.+|.
T Consensus 320 v~~~~~~L~g~~i~~~~~~~~~D~~p~l-~~~a~~A~G~t~I~e~--i~e~R~-~~~~eL~~lGa~i~~~~d~ 388 (479)
T 4fqd_A 320 AHPLTKPLRPVEFTAMSRGVFSDSQPFL-ALLGAYAEGPTYIREA--VWEHRF-GFAPELEALGIRTAVDDTV 388 (479)
T ss_dssp ECCCSSCBCCCEEEECTTSBCTTTHHHH-HHHHTTBSEEEEEEES--SSSSCC-TTHHHHHHHTCCEEEETTE
T ss_pred EEecCCCCCCeEEecCCCCCCHHHHHHH-HHHHHhCCCcEEEEcC--CcccHH-HHHHHHHHCCCeEEEECCE
Confidence 988 44544443321111111222222 3444577788888632 333444 3899999999999976653
No 21
>3tut_A RNA 3'-terminal phosphate cyclase; cyclase family, cyclization of RNA 3'-phosphate ENDS, transf; HET: ATP; 1.58A {Escherichia coli} PDB: 3tux_A* 3tv1_A* 3tw3_A* 3kgd_A* 1qmh_A* 1qmi_A
Probab=94.97 E-value=0.095 Score=45.27 Aligned_cols=125 Identities=18% Similarity=0.301 Sum_probs=73.6
Q ss_pred EEccCCH----HHHHH-HHHHhcccCCcEEEeeCCCC-----C-hHHHHHHHHHHHc-CCeEEEeeeCC-EEEEEcCCCC
Q 030153 51 VPISGSK----NSSLC-LLAATLLCSNSCLLHNVPTG-----L-SDTKAMLSILRSL-GAKIEFNERNK-EILVNTDGVG 117 (182)
Q Consensus 51 v~vpgsK----s~a~~-~laAA~La~g~~~I~n~~~~-----s-~Dv~~~l~~L~~l-Ga~I~~~~~~~-~l~I~~~~~~ 117 (182)
++|.||. ...+| .++.|+|++.+++|.|+-.+ . +.=...++++.++ |++|+.++.+. +++..|....
T Consensus 25 i~iDGs~~EGGGQ~lR~alaLS~Ltgkpv~I~nIR~~r~~PGL~~qhl~~l~ll~~it~a~veg~~~GSt~l~f~PG~i~ 104 (358)
T 3tut_A 25 IALDGAQGEGGGQILRSALSLSMITGQPFTITSIRAGRAKPGLLRQHLTAVKAATEICGATVEGAELGSQRLLFRPGTVR 104 (358)
T ss_dssp EEEETTSTTCSTHHHHHHHHHHHHHCCCEEEESTTTTSSSCSCCHHHHHHHHHHHHHHTCEEECCSTTCSCEEEECCCCC
T ss_pred EEEeCCcccCchHHHHHHHHHHHhhCCCEEEEEecCCCCCccccHHHHHHHHHHHHhhCCEEEEeecCcEEEEEECCCcc
Confidence 6677775 22332 56667799999999998530 1 1223467777775 89999544453 6888876543
Q ss_pred CCCCChhhhhhhhhHHHHHH---HHhhhhCC--eEEEecCCCCCC-CCChHHH----HHHHHHCCCEEEE
Q 030153 118 RVEPCLEEMRKIRGGFFVIG---PLLARFGE--AVVGLPGGCDIG-ERPVDLY----VRGLRALGAAVEI 177 (182)
Q Consensus 118 ~~~~~~~~~~~sgts~~~l~---~lla~~~~--~~~~~~G~~~l~-~Rpi~~l----~~~L~~lGa~v~~ 177 (182)
+..... .|+.+|+..+++= |++. |++ .++++.|+-.-. .-+++-+ +-.|++||+.++.
T Consensus 105 gg~~~~-d~~tagSi~l~lq~lLp~~l-Fa~~p~~l~l~GgTn~~~~psvDy~~~v~lP~l~~fG~~~~l 172 (358)
T 3tut_A 105 GGDYRF-AIGSAGSCTLVLQTVLPALW-FADGPSRVEVSGGTDNPSAPPADFIRRVLEPLLAKIGIHQQT 172 (358)
T ss_dssp CCEEEE-ECSSSCBHHHHHHHHHHHHT-TSSSCEEEEEEEBSCCTTSCCHHHHHHTHHHHHHHHTCCEEE
T ss_pred CceEEE-ECCCcccHHHHHHHHHHHHH-hCCCCEEEEEEecCCCCCCCCHHHHHHHHHHHHHHcCCcEEE
Confidence 322211 2444444333333 4443 444 567788866655 3445443 4458999998764
No 22
>3pqv_A RCL1 protein; RTC-like, cyclase-like, modular, alpha-beta, anion pocket, R biogenesis, unknown function; HET: TAR; 2.61A {Kluyveromyces lactis}
Probab=89.87 E-value=0.51 Score=40.74 Aligned_cols=113 Identities=9% Similarity=0.124 Sum_probs=66.9
Q ss_pred HHHHhcccCCcEEEeeCCCC-----ChHH-HHHHHHHHHc-CCeEE-EeeeCCEEEEEcCCCCCCCCChhhhhhhhhHHH
Q 030153 63 LLAATLLCSNSCLLHNVPTG-----LSDT-KAMLSILRSL-GAKIE-FNERNKEILVNTDGVGRVEPCLEEMRKIRGGFF 134 (182)
Q Consensus 63 ~laAA~La~g~~~I~n~~~~-----s~Dv-~~~l~~L~~l-Ga~I~-~~~~~~~l~I~~~~~~~~~~~~~~~~~sgts~~ 134 (182)
.++.|+|++.+++|+|+-.+ ..+= ...+++++++ +++++ .+..+.+++..|....+..... .++..|+..+
T Consensus 20 alaLS~ltgkpvrI~nIRa~r~~PGL~~qhls~l~ll~~itng~v~g~~~gst~l~F~Pg~i~gG~~~~-d~~tagSi~l 98 (365)
T 3pqv_A 20 RVVMATLSGKAIKIEKIRSDDLNPGLKDYEVSFLRLMEAVTNGSSIEISYTGTTVIFRPGIITGGSYTH-QCPNSKPVGY 98 (365)
T ss_dssp HHHHHHHHCCCEEEESSSTTSSSCSCCHHHHHHHHHHHHHEESCEEEECTTSSCEEEECCEECCEEEEE-ECCTTSCHHH
T ss_pred HHHHHHhhCCCEEEEEecCCCCCCCccHHHHHHHHHHHHHhCceEeeeecCCcEEEEECCcccCCeEEE-ECCCCcchHH
Confidence 35566799999999998430 2222 2478888886 45555 2223456777765433221111 2555565556
Q ss_pred HHHHHhhh--h--CCeEEEecCCCCCC-CCChHHH----HHHHHHCCCE-EE
Q 030153 135 VIGPLLAR--F--GEAVVGLPGGCDIG-ERPVDLY----VRGLRALGAA-VE 176 (182)
Q Consensus 135 ~l~~lla~--~--~~~~~~~~G~~~l~-~Rpi~~l----~~~L~~lGa~-v~ 176 (182)
++-|++.. | +..++++.|+-.-. .-+++-+ +-.|++||++ ++
T Consensus 99 ~l~~lL~~a~f~~~p~~l~l~GgTn~~~sPsvDy~~~v~lP~l~~fG~~~~~ 150 (365)
T 3pqv_A 99 FAEPMLYLAPFSKKKFSILFRGITSSHNDAGIDAIKWGLMPIMEKFGVRECA 150 (365)
T ss_dssp HHGGGGGTGGGSSSCEEEEEEECCCCSSSCCHHHHHHTTHHHHHHTTCCSCE
T ss_pred HHHHHHHHHhcCCCcEEEEEEcccCCCCCCCHHHHHHHHHHHHHHcCCCeEE
Confidence 66565543 3 33567888866655 4455544 4468999998 65
No 23
>4hkm_A Anthranilate phosphoribosyltransferase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; HET: MSE CXS; 1.95A {Xanthomonas campestris PV}
Probab=62.57 E-value=9.6 Score=32.23 Aligned_cols=83 Identities=19% Similarity=0.270 Sum_probs=43.9
Q ss_pred ChHHHHHHHHHHHcCCeEEEeeeCCEEEEEcCCCCCCCCChhhhhhhhhHHHHHHHHhhhhCCeEEEecCCCCCCCCChH
Q 030153 83 LSDTKAMLSILRSLGAKIEFNERNKEILVNTDGVGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVD 162 (182)
Q Consensus 83 s~Dv~~~l~~L~~lGa~I~~~~~~~~l~I~~~~~~~~~~~~~~~~~sgts~~~l~~lla~~~~~~~~~~G~~~l~~Rpi~ 162 (182)
.+++..+.++|++.|..+.+......+-+-|+++.+...- +. + .++.+++|++| .++..+|...+.++ .
T Consensus 55 ~eEi~g~~~am~~~~~~v~~~~~~~~vD~~gTGGdg~~t~-----ni--S-t~~a~v~Aa~G-~~V~khG~r~~ss~--~ 123 (346)
T 4hkm_A 55 IGEIAGAATVMREFSRRVEVTDRRHMVDIVGTGGDGSHTF-----NI--S-TCAMFVAAAGG-AKVAKHGNRSVSSK--S 123 (346)
T ss_dssp HHHHHHHHHHHHHHSCCCCCSCCTTEEEEECC------CC-----CH--H-HHHHHHHHHTT-CEEEEEC----------
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCccceeecCCCCCCcccc-----Cc--H-HHHHHHHHhcC-CCeeecCCCCCCCC--c
Confidence 4677789999999998887211223444445554221110 00 1 23446777777 56888888777643 1
Q ss_pred HHHHHHHHCCCEEE
Q 030153 163 LYVRGLRALGAAVE 176 (182)
Q Consensus 163 ~l~~~L~~lGa~v~ 176 (182)
--.+.|+.+|++++
T Consensus 124 GsaD~LeaLG~~~~ 137 (346)
T 4hkm_A 124 GSADALEALGAVIE 137 (346)
T ss_dssp -CHHHHHTTTCCCC
T ss_pred CHHHHHHHcCCCcc
Confidence 23678888898875
No 24
>2r6o_A Putative diguanylate cyclase/phosphodiesterase (G domains); ggdef and EAL domains, structural genomics, PSI-2; 1.80A {Thiobacillus denitrificans} PDB: 3ii8_A* 3n3t_A*
Probab=54.04 E-value=42 Score=27.16 Aligned_cols=81 Identities=16% Similarity=0.149 Sum_probs=45.0
Q ss_pred hHHHHHHHHHHHcCCeEEEeeeC--------------CEEEEEcCCCCCCCCChhhhhhhhhHHHHHHHHhhhhCCeEEE
Q 030153 84 SDTKAMLSILRSLGAKIEFNERN--------------KEILVNTDGVGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVG 149 (182)
Q Consensus 84 ~Dv~~~l~~L~~lGa~I~~~~~~--------------~~l~I~~~~~~~~~~~~~~~~~sgts~~~l~~lla~~~~~~~~ 149 (182)
+.+...++.|+++|+.|-+|.-+ +.++|+..-......+. ....-+.-+..++..++ ..++
T Consensus 163 ~~~~~~l~~Lr~~G~~ialDDFGtG~ssl~~L~~l~~d~iKID~sfv~~i~~~~----~~~~iv~~ii~la~~lg-~~vv 237 (294)
T 2r6o_A 163 DEVRTCLDALRARGVRLALDDFGTGYSSLSYLSQLPFHGLKIDQSFVRKIPAHP----SETQIVTTILALARGLG-MEVV 237 (294)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEETSSCBCHHHHHHSCCCEEEECHHHHTTTTTSH----HHHHHHHHHHHHHHHTT-CEEE
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCCchhHHHHHhCCCCEEEECHHHHhhhhcCh----HHHHHHHHHHHHHHHCC-CEEE
Confidence 45567889999999999864433 23444442111111111 01111223334444455 4577
Q ss_pred ecCCCCCCCCChHHHHHHHHHCCCEE
Q 030153 150 LPGGCDIGERPVDLYVRGLRALGAAV 175 (182)
Q Consensus 150 ~~G~~~l~~Rpi~~l~~~L~~lGa~v 175 (182)
..|.+. ...++.|+++|++.
T Consensus 238 AEGVEt------~~q~~~l~~lG~d~ 257 (294)
T 2r6o_A 238 AEGIET------AQQYAFLRDRGCEF 257 (294)
T ss_dssp ECCCCS------HHHHHHHHHTTCCE
T ss_pred EecCCc------HHHHHHHHHcCCCE
Confidence 777665 45588899999876
No 25
>2elc_A Trp D, anthranilate phosphoribosyltransferase; structural genomics, NPPSFA, national project O structural and functional analyses; 1.55A {Thermus thermophilus} SCOP: a.46.2.1 c.27.1.1 PDB: 1v8g_A
Probab=48.09 E-value=32 Score=28.84 Aligned_cols=81 Identities=17% Similarity=0.131 Sum_probs=51.2
Q ss_pred ChHHHHHHHHHHHcCCeEEEeee-CCEEEEEcCCCCCCCCChhhhhhhhhHHHHHHHHhhhhCCeEEEecCCCCCCCCCh
Q 030153 83 LSDTKAMLSILRSLGAKIEFNER-NKEILVNTDGVGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPV 161 (182)
Q Consensus 83 s~Dv~~~l~~L~~lGa~I~~~~~-~~~l~I~~~~~~~~~~~~~~~~~sgts~~~l~~lla~~~~~~~~~~G~~~l~~Rpi 161 (182)
.+++..+.++|++.+..+. .. +..+-+-|+++.+...- |. + ..+.+++|++| .++..+|...+.++-=
T Consensus 49 ~~Eiag~~~am~~~~~~~~--~~~~~~vD~~gTGGdg~~tf-----Ni--S-t~~a~v~Aa~G-v~V~kHGnr~~ss~~G 117 (329)
T 2elc_A 49 PHEIAAMARAMREAARPLR--VHRRPLLDIVGTGGDGKGLM-----NL--S-TLAALVAAAGG-VAVAKHGNRAASSRAG 117 (329)
T ss_dssp HHHHHHHHHHHHHHSCCCC--CCCSSEEEEEECCCCSSCCC-----CC--H-HHHHHHHHHTT-CEEEEEECCCTTTTCS
T ss_pred HHHHHHHHHHHHHhCCCCC--CCCCCeeEEcCCCCCCCCcc-----cc--H-HHHHHHHHhCC-CCEEEeCCCCCCCccc
Confidence 4777789999999998877 43 33444556654322111 11 1 22346777777 5688899888875322
Q ss_pred HHHHHHHHHCCCEEE
Q 030153 162 DLYVRGLRALGAAVE 176 (182)
Q Consensus 162 ~~l~~~L~~lGa~v~ 176 (182)
-.+.|+.+|++++
T Consensus 118 --saDvLeaLG~~~~ 130 (329)
T 2elc_A 118 --SADLLEALGVDLE 130 (329)
T ss_dssp --HHHHHHHTTCCTT
T ss_pred --HHHHHHhCCCCCC
Confidence 3688888998764
No 26
>4hjf_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, EAL domain, signaling protein; HET: MSE C2E; 1.75A {Caulobacter crescentus}
Probab=47.25 E-value=27 Score=29.01 Aligned_cols=81 Identities=15% Similarity=0.103 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHcCCeEEEeeeC--------------CEEEEEcCCCCCCCCChhhhhhhhhHHHHHHHHhhhhCCeEEEe
Q 030153 85 DTKAMLSILRSLGAKIEFNERN--------------KEILVNTDGVGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGL 150 (182)
Q Consensus 85 Dv~~~l~~L~~lGa~I~~~~~~--------------~~l~I~~~~~~~~~~~~~~~~~sgts~~~l~~lla~~~~~~~~~ 150 (182)
.+...++.|+++|++|-+|.-+ +.++|+..-......+. ....-+.-+..++..+| ..++.
T Consensus 213 ~~~~~l~~Lr~~G~~ialDDFGtG~ssl~~L~~lp~d~iKID~sfv~~~~~~~----~~~~iv~~ii~la~~lg-~~vvA 287 (340)
T 4hjf_A 213 RAAVILKTLRDAGAGLALDDFGTGFSSLSYLTRLPFDTLKIDRYFVRTMGNNA----GSAKIVRSVVKLGQDLD-LEVVA 287 (340)
T ss_dssp HHHHHHHHHHHHTCEEEEECTTSSSCGGGTGGGSCCSEEEECHHHHHHTTTCH----HHHHHHHHHHHHHHHHT-CEEEE
T ss_pred HHHHHHHHHHHcCCCccccCCCCCcchHHHHHhCCCChhcccHHhhhcccCCH----hHHHHHHHHHHHHHHcC-CEEEE
Confidence 4456788899999999854432 23333332110000000 11112233334444456 45778
Q ss_pred cCCCCCCCCChHHHHHHHHHCCCEEE
Q 030153 151 PGGCDIGERPVDLYVRGLRALGAAVE 176 (182)
Q Consensus 151 ~G~~~l~~Rpi~~l~~~L~~lGa~v~ 176 (182)
.|.+. ...++.|+++|++.-
T Consensus 288 EGVEt------~~q~~~L~~lG~d~~ 307 (340)
T 4hjf_A 288 EGVEN------AEMAHALQSLGCDYG 307 (340)
T ss_dssp ECCCS------HHHHHHHHHTTCCEE
T ss_pred EeCCc------HHHHHHHHHcCCCEe
Confidence 88765 456888999999864
No 27
>2bas_A YKUI protein; EAL domain, structural genom protein structure initiative, midwest center for structural genomics, MCSG, signaling protein; 2.61A {Bacillus subtilis} SCOP: c.1.33.1 d.110.6.2 PDB: 2w27_A*
Probab=42.94 E-value=1.2e+02 Score=25.91 Aligned_cols=101 Identities=14% Similarity=0.150 Sum_probs=55.8
Q ss_pred HHHhcccCCcEEEeeCCCC----ChHHHHHHHHHHHcCCeEEEeeeC--------------CEEEEEcCCCCCCCCChhh
Q 030153 64 LAATLLCSNSCLLHNVPTG----LSDTKAMLSILRSLGAKIEFNERN--------------KEILVNTDGVGRVEPCLEE 125 (182)
Q Consensus 64 laAA~La~g~~~I~n~~~~----s~Dv~~~l~~L~~lGa~I~~~~~~--------------~~l~I~~~~~~~~~~~~~~ 125 (182)
+....+..+.++|+=.... .+.+...++.|+++|+.|-+|.-+ +.++|+..-......+..
T Consensus 133 l~~~~~~~~~l~lEItE~~~~~~~~~~~~~l~~Lr~~G~~ialDDFG~g~ssl~~L~~l~~d~iKID~s~v~~~~~~~~- 211 (431)
T 2bas_A 133 YEAKGIELHRFVLEITEHNFEGDIEQLYHMLAYYRTYGIKIAVDNIGKESSNLDRIALLSPDLLKIDLQALKVSQPSPS- 211 (431)
T ss_dssp HHHTTCCGGGEEEEECCTTCCSCHHHHHHHHHHHHTTTCEEEEEEETTTBCCHHHHHHHCCSEEEEECTTTC----CCH-
T ss_pred HHHcCCCCCeEEEEEECChhhCCHHHHHHHHHHHHHCCCEEEEECCCCCcHHHHHHHhCCCCEEEECHHHHhhhhcCHh-
Confidence 3333334455666533220 234456888899999999865433 467777654322211111
Q ss_pred hhhhhhHHHHHHHHhhhhCCeEEEecCCCCCCCCChHHHHHHHHHCCCEE
Q 030153 126 MRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGAAV 175 (182)
Q Consensus 126 ~~~sgts~~~l~~lla~~~~~~~~~~G~~~l~~Rpi~~l~~~L~~lGa~v 175 (182)
...-+.-+..++..+| ..++..|.+. ...++.|+++|++.
T Consensus 212 ---~~~il~~ii~la~~lg-~~vvAEGVEt------~~q~~~l~~lG~d~ 251 (431)
T 2bas_A 212 ---YEHVLYSISLLARKIG-AALLYEDIEA------NFQLQYAWRNGGRY 251 (431)
T ss_dssp ---HHHHHHHHHHHHHHHT-CEEEEECCCS------HHHHHHHHHTTEEE
T ss_pred ---HHHHHHHHHHHHHHcC-CEEEEEeCCC------HHHHHHHHHcCCCE
Confidence 1112233334444455 4577777665 45588899999886
No 28
>3r88_A Anthranilate phosphoribosyltransferase; anthranilic acids, M tryptophan, inhibitor, magnesium binding phosp pyrophosphate; HET: PRP 14F; 1.73A {Mycobacterium tuberculosis} PDB: 3qqs_A 3qs8_A* 3qsa_A* 3qr9_A* 3r6c_A* 3twp_A* 1zvw_A* 2bpq_A
Probab=42.48 E-value=50 Score=28.17 Aligned_cols=83 Identities=16% Similarity=0.152 Sum_probs=52.0
Q ss_pred ChHHHHHHHHHHHcCCeEEEee-eCCEEEEEcCCCCCCC-CChhhhhhhhhHHHHHHHHhhhhCCeEEEecCCCCCCCCC
Q 030153 83 LSDTKAMLSILRSLGAKIEFNE-RNKEILVNTDGVGRVE-PCLEEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERP 160 (182)
Q Consensus 83 s~Dv~~~l~~L~~lGa~I~~~~-~~~~l~I~~~~~~~~~-~~~~~~~~sgts~~~l~~lla~~~~~~~~~~G~~~l~~Rp 160 (182)
.+++..+.++|++.+..+.++. .+..+-+-|++..+.. .+- + .++.+++|++| .++..+|...+.++-
T Consensus 75 ~eEi~g~~~am~~~~~~v~~~~~~~~~vD~~gTGGdg~~T~ni--------S-t~~A~v~Aa~G-v~VaKHGnR~~ss~~ 144 (377)
T 3r88_A 75 ADEVGELAGVMLSHAHPLPADTVPDDAVDVVGTGGDGVNTVNL--------S-TMAAIVVAAAG-VPVVKHGNRAASSLS 144 (377)
T ss_dssp HHHHHHHHHHHHHHSCCCCTTCSCTTCEEEEECCCCSCCBCCH--------H-HHHHHHHHHTT-CCEEEEECCCSSSSC
T ss_pred HHHHHHHHHHHHHhCCcCCCccCCCCCeEEeCCCCCCcCcccc--------H-HHHHHHHHhcC-CeEEeECCCCCCCcc
Confidence 4677789999999998876211 1244555565543221 111 1 23446777777 568889988887532
Q ss_pred hHHHHHHHHHCCCEEEE
Q 030153 161 VDLYVRGLRALGAAVEI 177 (182)
Q Consensus 161 i~~l~~~L~~lGa~v~~ 177 (182)
= -.+.|+.+|++++.
T Consensus 145 G--saDvLEaLGv~~~l 159 (377)
T 3r88_A 145 G--GADTLEALGVRIDL 159 (377)
T ss_dssp C--HHHHHHHTTCCCCC
T ss_pred c--HHHHHHHcCCCccc
Confidence 2 35788889998753
No 29
>3pjx_A Cyclic dimeric GMP binding protein; ggdef-EAL tandem domain, C-DI-GMP receptor, lyase; 2.00A {Pseudomonas fluorescens} PDB: 3pjw_A 3pju_A* 3pjt_A* 3pfm_A
Probab=39.02 E-value=1.1e+02 Score=25.69 Aligned_cols=79 Identities=10% Similarity=0.007 Sum_probs=46.1
Q ss_pred HHHHHHHHHcCCeEEEeeeC--------------CEEEEEcCCCCCCCCChhhhhhhhhHHHHHHHHhhhhCCeEEEecC
Q 030153 87 KAMLSILRSLGAKIEFNERN--------------KEILVNTDGVGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGLPG 152 (182)
Q Consensus 87 ~~~l~~L~~lGa~I~~~~~~--------------~~l~I~~~~~~~~~~~~~~~~~sgts~~~l~~lla~~~~~~~~~~G 152 (182)
...++.|+++|++|-+|.-+ +.++|++.-......+.. ...-+.-+..++..++ ..++..|
T Consensus 326 ~~~~~~l~~~G~~ialDdfG~g~ssl~~L~~l~~d~iKiD~~~v~~~~~~~~----~~~~~~~i~~~a~~l~-~~viaeG 400 (430)
T 3pjx_A 326 EQLTRRLRELGFSLSLQRFGGRFSMIGNLARLGLAYLKIDGSYIRAIDQESD----KRLFIEAIQRAAHSID-LPLIAER 400 (430)
T ss_dssp HHHHHHHHHHTCEEEEEEECCCHHHHCTHHHHCCSCEEECGGGTTTTTTCHH----HHHHHHHHHHHHHTTT-CCEEECC
T ss_pred HHHHHHHHHCCCEEEEeCCCCCchhHHHHHhCCCCEEEECHHHHHhHhcChh----hHHHHHHHHHHHHHCC-CcEEEEe
Confidence 45678899999999865533 356666643322221211 1112233334444455 3577777
Q ss_pred CCCCCCCChHHHHHHHHHCCCEEE
Q 030153 153 GCDIGERPVDLYVRGLRALGAAVE 176 (182)
Q Consensus 153 ~~~l~~Rpi~~l~~~L~~lGa~v~ 176 (182)
.+. ...++.|+++|++.-
T Consensus 401 VEt------~~~~~~l~~~g~~~~ 418 (430)
T 3pjx_A 401 VET------EGELSVIREMGLYGV 418 (430)
T ss_dssp CCC------HHHHHHHHHTTCSEE
T ss_pred cCC------HHHHHHHHHcCCCee
Confidence 664 456889999999864
No 30
>4f3h_A Fimxeal, putative uncharacterized protein; fimxeal-C-DI-GMP, type IV pilus, signaling protein; HET: C2E; 2.50A {Xanthomonas campestris PV} PDB: 4f48_A*
Probab=36.82 E-value=61 Score=25.01 Aligned_cols=81 Identities=10% Similarity=0.099 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHcCCeEEEeeeC--------------CEEEEEcCCCCCCCCChhhhhhhhhHHHHHHHHhhhhCCeEEEe
Q 030153 85 DTKAMLSILRSLGAKIEFNERN--------------KEILVNTDGVGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGL 150 (182)
Q Consensus 85 Dv~~~l~~L~~lGa~I~~~~~~--------------~~l~I~~~~~~~~~~~~~~~~~sgts~~~l~~lla~~~~~~~~~ 150 (182)
.+...++.|+++|+++-+|.-+ +.++|++.-......+. .....+.-+..++..++ ..++.
T Consensus 144 ~~~~~l~~L~~~G~~ialDdfG~g~s~l~~L~~l~~d~iKiD~~~v~~~~~~~----~~~~~l~~i~~~a~~l~-~~via 218 (250)
T 4f3h_A 144 NAQQFLASVSAMGCKVGLEQFGSGLDSFQLLAHFQPAFLKLDRSITGDIASAR----ESQEKIREITSRAQPTG-ILTVA 218 (250)
T ss_dssp HHHHHHHHHHTTTCEEEEEEETSSTHHHHHHTTSCCSEEEECHHHHTTTTTCS----HHHHHHHHTHHHHHHHT-CEEEE
T ss_pred HHHHHHHHHHHCCCEEEEeCCCCCchHHHHHhhCCCCEEEECHHHHHhHhcCh----hhHHHHHHHHHHHHHcC-CEEEE
Confidence 4456788899999999864433 24555542111111111 11122233334444455 45777
Q ss_pred cCCCCCCCCChHHHHHHHHHCCCEEE
Q 030153 151 PGGCDIGERPVDLYVRGLRALGAAVE 176 (182)
Q Consensus 151 ~G~~~l~~Rpi~~l~~~L~~lGa~v~ 176 (182)
.|.+. ...++.|+++|++.-
T Consensus 219 eGVEt------~~~~~~l~~~G~~~~ 238 (250)
T 4f3h_A 219 EFVAD------AQSMSSFFTAGVDYV 238 (250)
T ss_dssp CCCCC------HHHHHHHHHHTCSEE
T ss_pred eccCC------HHHHHHHHHcCCCEE
Confidence 77664 445888999999863
No 31
>1vqu_A Anthranilate phosphoribosyltransferase 2; 17130499, structur genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI; 1.85A {Nostoc SP}
Probab=36.71 E-value=70 Score=27.24 Aligned_cols=81 Identities=17% Similarity=0.106 Sum_probs=44.6
Q ss_pred ChHHHHHHHHHHHcCCeE--------EEeee---CCEEEEEcCCCCCCCCChhhhhhhhhHHHHHHHHhhhhCCeEEEec
Q 030153 83 LSDTKAMLSILRSLGAKI--------EFNER---NKEILVNTDGVGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGLP 151 (182)
Q Consensus 83 s~Dv~~~l~~L~~lGa~I--------~~~~~---~~~l~I~~~~~~~~~~~~~~~~~sgts~~~l~~lla~~~~~~~~~~ 151 (182)
.+++..+.++|++.+..+ . .. +..+-+-|+++.+...- |. + ..+.+++|++| .++...
T Consensus 76 ~eEiag~~~am~~~~~~~~~~~~~~~~--~~~~~~~~vD~~gTGGdg~~tf-----Ni--S-t~~A~v~Aa~G-v~VaKH 144 (374)
T 1vqu_A 76 ADELTGMAEVLQSQSKMGTGENYSQLP--ITNSPFSIIDTCGTGGDGSSTF-----NI--S-TAVAFVAAAYG-VPVAKH 144 (374)
T ss_dssp HHHHHHHHHHHHTTCCC-------------CCSSSCCEEEEECC---CCBC-----CH--H-HHHHHHHHHTT-CCEEEE
T ss_pred HHHHHHHHHHHHHhCCccccccccccC--ccccCCCeeEEeCCCCCCCCcc-----ch--H-HHHHHHHHhCC-CCEEEE
Confidence 477778999999999888 5 32 23333445554322111 01 1 23446777776 467888
Q ss_pred CCCCCCCCChHHHHHHHHHCCCEEE
Q 030153 152 GGCDIGERPVDLYVRGLRALGAAVE 176 (182)
Q Consensus 152 G~~~l~~Rpi~~l~~~L~~lGa~v~ 176 (182)
|...+.++-= -.+.|+.+|++++
T Consensus 145 GnR~~ss~~G--saDvLEaLGv~~~ 167 (374)
T 1vqu_A 145 GNRSASSLTG--SADVLEALGVNLG 167 (374)
T ss_dssp EECC--CTTC--HHHHHHHTTCCTT
T ss_pred CCCCCCCCCC--HHHHHHhCCCCCC
Confidence 8877753321 4677888888763
No 32
>3hv8_A Protein FIMX; EAL phosphodiesterase, biofilm, C-DI-GMP, hydrolase; HET: C2E; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 3hv9_A 4afy_A 4ag0_A
Probab=35.68 E-value=1.2e+02 Score=23.50 Aligned_cols=101 Identities=15% Similarity=0.015 Sum_probs=52.5
Q ss_pred HHHhcccCCcEEEeeCCC----CChHHHHHHHHHHHcCCeEEEeeeC--------------CEEEEEcCCCCCCCCChhh
Q 030153 64 LAATLLCSNSCLLHNVPT----GLSDTKAMLSILRSLGAKIEFNERN--------------KEILVNTDGVGRVEPCLEE 125 (182)
Q Consensus 64 laAA~La~g~~~I~n~~~----~s~Dv~~~l~~L~~lGa~I~~~~~~--------------~~l~I~~~~~~~~~~~~~~ 125 (182)
+....+..+.++|+=... ..+.+...++.|+++|+++-+|.-+ +.++|++.-..... .+
T Consensus 129 l~~~~~~~~~l~lEitE~~~~~~~~~~~~~l~~L~~~G~~ialDDfG~g~ssl~~L~~l~~d~iKiD~~~v~~~~--~~- 205 (268)
T 3hv8_A 129 LKAARLPPESLVFQISEADATSYLKQAKQLTQGLATLHCQAAISQFGCSLNPFNALKHLTVQFIKIDGSFVQDLN--QV- 205 (268)
T ss_dssp HHHHTCCSSCEEEEEEHHHHHHTHHHHHHHHHHHHHTTCEEEEEEETCSSSTTGGGGTCCCSEEEECGGGGSSTT--SH-
T ss_pred HHHcCCChhhEEEEEEcHHHHhCHHHHHHHHHHHHHCCCEEEEeCCCCChHHHHHHHhCCCCEEEECHHHHHhhh--cC-
Confidence 333344455566653221 0133456788899999999864432 24555543221111 00
Q ss_pred hhhhhhHHHHHHHHhhhhCCeEEEecCCCCCCCCChHHHHHHHHHCCCEEE
Q 030153 126 MRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGAAVE 176 (182)
Q Consensus 126 ~~~sgts~~~l~~lla~~~~~~~~~~G~~~l~~Rpi~~l~~~L~~lGa~v~ 176 (182)
.....+.-+..++...+ ..++..|.+. ...++.|+++|++.-
T Consensus 206 --~~~~~l~~ii~~~~~~~-~~viaeGVEt------~~~~~~l~~lG~~~~ 247 (268)
T 3hv8_A 206 --ENQEILKGLIAELHEQQ-KLSIVPFVES------ASVLATLWQAGATYI 247 (268)
T ss_dssp --HHHHHHHHHHHHHHHTT-CEEEECCCCS------HHHHHHHHHHTCSEE
T ss_pred --hhHHHHHHHHHHHHHcC-CCEEEEeeCC------HHHHHHHHHcCCCEe
Confidence 11122223333444445 3566666553 556888999999863
No 33
>2tpt_A Thymidine phosphorylase; transferase, salvage pathway; 2.60A {Escherichia coli} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 1azy_A 1tpt_A 1otp_A
Probab=33.88 E-value=73 Score=27.84 Aligned_cols=78 Identities=14% Similarity=0.277 Sum_probs=49.9
Q ss_pred ChHHHHHHHHHHHcCCeEEEeeeC-----CEEEEEcCCCCCCCCChhhhhhhhhHHHHHHHHhhhhCCeEEEecCCCCCC
Q 030153 83 LSDTKAMLSILRSLGAKIEFNERN-----KEILVNTDGVGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIG 157 (182)
Q Consensus 83 s~Dv~~~l~~L~~lGa~I~~~~~~-----~~l~I~~~~~~~~~~~~~~~~~sgts~~~l~~lla~~~~~~~~~~G~~~l~ 157 (182)
.+++..+.++|++.|..+. ..+ ..+-+-|+++.+.. .+ ..+.+++|++| ..+..+|...+.
T Consensus 53 ~eEiag~~~Am~~~~~~~~--~~~~~~~~~~vD~~gTGGdG~~----------iS-t~~A~vvAa~G-v~VaKHGnR~~s 118 (440)
T 2tpt_A 53 MPERVSLTMAMRDSGTVLD--WKSLHLNGPIVDKHSTGGVGDV----------TS-LMLGPMVAACG-GYIPMISGRGLG 118 (440)
T ss_dssp HHHHHHHHHHHHHTSBCCC--CTTTTCSSCBEEEEECCCSSCC----------HH-HHHHHHHHHTT-CBEEEEECCCCT
T ss_pred HHHHHHHHHHHHHhCCcCC--CcccccCCCeeeeCCCCCCCcc----------HH-HHHHHHHHhCC-CcEEEECCCCCC
Confidence 4777789999999998887 432 34445555543221 12 34557888777 467788877775
Q ss_pred CCChHHHHHHHHHC-CCEEE
Q 030153 158 ERPVDLYVRGLRAL-GAAVE 176 (182)
Q Consensus 158 ~Rpi~~l~~~L~~l-Ga~v~ 176 (182)
+.-= -.+.|+.+ |++++
T Consensus 119 s~~G--saDvLEaL~Gv~~~ 136 (440)
T 2tpt_A 119 HTGG--TLDKLESIPGFDIF 136 (440)
T ss_dssp TSCC--HHHHHTTSTTCCSC
T ss_pred Cccc--HHHHHHhCcCCCCC
Confidence 3221 36777777 77654
No 34
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=32.61 E-value=88 Score=20.78 Aligned_cols=30 Identities=3% Similarity=-0.069 Sum_probs=24.4
Q ss_pred CCcEEEeeCCCCChHHHHHHHHHHHcCCeEE
Q 030153 71 SNSCLLHNVPTGLSDTKAMLSILRSLGAKIE 101 (182)
Q Consensus 71 ~g~~~I~n~~~~s~Dv~~~l~~L~~lGa~I~ 101 (182)
...++|---+. +.+...+.+.|++.|+.++
T Consensus 3 ta~I~vYs~~~-Cp~C~~aK~~L~~~gi~y~ 32 (92)
T 2lqo_A 3 TAALTIYTTSW-CGYCLRLKTALTANRIAYD 32 (92)
T ss_dssp SSCEEEEECTT-CSSHHHHHHHHHHTTCCCE
T ss_pred CCcEEEEcCCC-CHhHHHHHHHHHhcCCceE
Confidence 34577777777 8888889999999998877
No 35
>3gfz_A Klebsiella pneumoniae BLRP1; TIM-barrel, EAL domain, BLUF domain, hydrolase, signaling PR; HET: C2E FMN; 2.05A {Klebsiella pneumoniae subsp} PDB: 3gfy_A* 3gfx_A* 3gg0_A* 3gg1_A* 2kb2_A*
Probab=32.25 E-value=1e+02 Score=26.12 Aligned_cols=82 Identities=16% Similarity=0.093 Sum_probs=46.0
Q ss_pred hHHHHHHHHHHHcCCeEEEeeeC--------------CEEEEEcCCCCCCCCChhhhhhhhhHHHHHHHHhhhhCCeEEE
Q 030153 84 SDTKAMLSILRSLGAKIEFNERN--------------KEILVNTDGVGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVG 149 (182)
Q Consensus 84 ~Dv~~~l~~L~~lGa~I~~~~~~--------------~~l~I~~~~~~~~~~~~~~~~~sgts~~~l~~lla~~~~~~~~ 149 (182)
+.+...++.|+++|+.|-+|.-+ +.++|+..-......+. ....-+.-+..++..+| ..++
T Consensus 291 ~~~~~~l~~Lr~~G~~ialDDFG~g~ssl~~L~~l~~d~iKID~s~v~~~~~~~----~~~~iv~~ii~la~~lg-~~vi 365 (413)
T 3gfz_A 291 DQFRKVLKALRVAGMKLAIDDFGAGYSGLSLLTRFQPDKIKVDAELVRDIHISG----TKQAIVASVVRCCEDLG-ITVV 365 (413)
T ss_dssp TTHHHHHHHHHHHTCEEEEEEETSSSCSHHHHTTCCCSEEEECHHHHTTTTTBH----HHHHHHHHHHHHHHHHT-CEEE
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCCcchHHHHhhCCCCEEEECHHHHhhhhcCh----HHHHHHHHHHHHHHHcC-CEEE
Confidence 45667889999999999864433 23444432111111011 11112233334444455 4577
Q ss_pred ecCCCCCCCCChHHHHHHHHHCCCEEE
Q 030153 150 LPGGCDIGERPVDLYVRGLRALGAAVE 176 (182)
Q Consensus 150 ~~G~~~l~~Rpi~~l~~~L~~lGa~v~ 176 (182)
..|.+. ...++.|+++|++.-
T Consensus 366 AEGVEt------~~q~~~l~~lG~d~~ 386 (413)
T 3gfz_A 366 AEGVET------LEEWCWLQSVGIRLF 386 (413)
T ss_dssp EECCCS------HHHHHHHHHTTCCEE
T ss_pred EecCCC------HHHHHHHHHcCCCEE
Confidence 777665 455888999999864
No 36
>1khd_A Anthranilate phosphoribosyltransferase; type 3 PRT fold, nucleotide binding fold; 1.86A {Pectobacterium carotovorum} SCOP: a.46.2.1 c.27.1.1 PDB: 1kgz_A
Probab=31.52 E-value=59 Score=27.36 Aligned_cols=82 Identities=13% Similarity=0.060 Sum_probs=45.9
Q ss_pred ChHHHHHHHHHHHcCCeEEEeeeC-CEEEEEcCCCCCCCCChhhhhhhhhHHHHHHHHhhhhCCeEEEecCCCCCCCCCh
Q 030153 83 LSDTKAMLSILRSLGAKIEFNERN-KEILVNTDGVGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPV 161 (182)
Q Consensus 83 s~Dv~~~l~~L~~lGa~I~~~~~~-~~l~I~~~~~~~~~~~~~~~~~sgts~~~l~~lla~~~~~~~~~~G~~~l~~Rpi 161 (182)
.+++..+.+++++.+..+. ... ..+-+-|+++.+...- +- + ..+.+++|++| .++..+|...+.+.+-
T Consensus 62 ~eEiag~~~am~~~~~~~~--~~~~~~vD~~gTGGdg~~tf----Ni---S-t~~A~v~Aa~G-v~VakHGnr~~ss~~~ 130 (345)
T 1khd_A 62 PEEIAGAASALLADAQPFP--RPDYDFADIVGTGGDGTNSI----NI---S-TASAFVAASCG-AKVAKHGNRSVCQPLA 130 (345)
T ss_dssp HHHHHHHHHHHHHTSCCCC--CCSSCCEEEEECCCCSSCBC----CC---H-HHHHHHHHHHT-CCEEEEECC-------
T ss_pred HHHHHHHHHHHHHhCCcCC--CCCCCeeeecCCCCCCCCcc----ch---H-HHHHHHHHhCC-CcEEEeCCCCCCCCcc
Confidence 4777789999999998876 432 3343556655432110 11 1 13346677777 4577888777655111
Q ss_pred HHHHHHHHHCCCEEE
Q 030153 162 DLYVRGLRALGAAVE 176 (182)
Q Consensus 162 ~~l~~~L~~lGa~v~ 176 (182)
. -.+.|+.+|++++
T Consensus 131 G-saDvLeaLGv~~~ 144 (345)
T 1khd_A 131 G-SCDLLQAFGIRLD 144 (345)
T ss_dssp ---CHHHHHTTCCTT
T ss_pred c-HHHHHHhCCCCCC
Confidence 2 3678888888763
No 37
>3s83_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, signaling protein; HET: MSE; 1.34A {Caulobacter crescentus} PDB: 3u2e_A
Probab=31.37 E-value=64 Score=24.98 Aligned_cols=118 Identities=14% Similarity=0.075 Sum_probs=57.9
Q ss_pred ceEEEccCCH-------HHHHHHHHHhcccCCcEEEeeCCC----CChHHHHHHHHHHHcCCeEEEeeeC----------
Q 030153 48 SGHVPISGSK-------NSSLCLLAATLLCSNSCLLHNVPT----GLSDTKAMLSILRSLGAKIEFNERN---------- 106 (182)
Q Consensus 48 ~g~v~vpgsK-------s~a~~~laAA~La~g~~~I~n~~~----~s~Dv~~~l~~L~~lGa~I~~~~~~---------- 106 (182)
.-.|.+++.- ......+....+..+.++++=... ..+.+...++.|+++|++|-+|.-+
T Consensus 92 ~l~iNls~~~l~~~~~~~~l~~~l~~~~~~~~~l~lEitE~~~~~~~~~~~~~l~~l~~~G~~ialDdfG~g~ssl~~L~ 171 (259)
T 3s83_A 92 TVSVNLSTGEIDRPGLVADVAETLRVNRLPRGALKLEVTESDIMRDPERAAVILKTLRDAGAGLALDDFGTGFSSLSYLT 171 (259)
T ss_dssp EEEEECCTTGGGSTTHHHHHHHHHHHTTCCTTSEEEEEEHHHHHHCHHHHHHHHHHHHHHTCEEEEECC---CHHHHHHH
T ss_pred EEEEEcCHHHhCCcHHHHHHHHHHHHcCCCcceEEEEECCchhhhCHHHHHHHHHHHHHCCCEEEEECCCCCchhHHHHH
Confidence 3456666543 222223333334445566553221 0234456788899999999854422
Q ss_pred ----CEEEEEcCCCCCCCCChhhhhhhhhHHHHHHHHhhhhCCeEEEecCCCCCCCCChHHHHHHHHHCCCEEE
Q 030153 107 ----KEILVNTDGVGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGAAVE 176 (182)
Q Consensus 107 ----~~l~I~~~~~~~~~~~~~~~~~sgts~~~l~~lla~~~~~~~~~~G~~~l~~Rpi~~l~~~L~~lGa~v~ 176 (182)
+.++|++.-......+. .....+.-+..++..++ ..++..|.+. ...++.|+++|++.-
T Consensus 172 ~l~~d~iKiD~~~v~~~~~~~----~~~~~~~~i~~~a~~~g-~~viaeGVEt------~~~~~~l~~lG~~~~ 234 (259)
T 3s83_A 172 RLPFDTLKIDRYFVRTMGNNA----GSAKIVRSVVKLGQDLD-LEVVAEGVEN------AEMAHALQSLGCDYG 234 (259)
T ss_dssp HSCCCEEEECHHHHHHTTTCH----HHHHHHHHHHHHHHHTT-CEEEECCCCS------HHHHHHHHHHTCCEE
T ss_pred hCCCCEEEECHHHHhhhhcCc----hHHHHHHHHHHHHHHCC-CeEEEEeCCC------HHHHHHHHhcCCCEe
Confidence 23444432110000000 01112233334444455 4577777664 445888999998863
No 38
>3hvb_A Protein FIMX; EAL phosphodiesterase, biofilm, C-DI-GMP, hydrolase; 2.99A {Pseudomonas aeruginosa PAO1}
Probab=28.53 E-value=1.8e+02 Score=24.22 Aligned_cols=79 Identities=13% Similarity=-0.008 Sum_probs=45.4
Q ss_pred HHHHHHHHHHcCCeEEEeeeC--------------CEEEEEcCCCCCCCCChhhhhhhhhHHHHHHHHhhhhCCeEEEec
Q 030153 86 TKAMLSILRSLGAKIEFNERN--------------KEILVNTDGVGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGLP 151 (182)
Q Consensus 86 v~~~l~~L~~lGa~I~~~~~~--------------~~l~I~~~~~~~~~~~~~~~~~sgts~~~l~~lla~~~~~~~~~~ 151 (182)
+...++.|+++|++|-+|.-+ +.++|++.-......+ .....+.-+..++...+ ..++..
T Consensus 324 ~~~~l~~l~~~G~~ialDDfG~g~ssl~~L~~l~~d~iKiD~~~i~~~~~~-----~~~~~~~~~i~~~~~~~-~~viae 397 (437)
T 3hvb_A 324 AKQLTQGLATLHCQAAISQFGCSLNPFNALKHLTVQFIKIDGSFVQDLNQV-----ENQEILKGLIAELHEQQ-KLSIVP 397 (437)
T ss_dssp HHHHHHHHHHTTCEEEEEEETCSSSHHHHHTTSCCSEEEECGGGSSCCSSH-----HHHHHHHHHHHHHHHTT-CEEEEC
T ss_pred HHHHHHHHHHCCCEEEEcCCCCCccHHHHHhhCCCCEEEECHHHHHhHhhC-----cHHHHHHHHHHHHHHcC-CCEEee
Confidence 445788899999999864433 3567766433221111 11122233334444455 346666
Q ss_pred CCCCCCCCChHHHHHHHHHCCCEEE
Q 030153 152 GGCDIGERPVDLYVRGLRALGAAVE 176 (182)
Q Consensus 152 G~~~l~~Rpi~~l~~~L~~lGa~v~ 176 (182)
|.+. ...++.|+++|++.-
T Consensus 398 gVEt------~~~~~~l~~~G~~~~ 416 (437)
T 3hvb_A 398 FVES------ASVLATLWQAGATYI 416 (437)
T ss_dssp CCCS------HHHHHHHHHHTCSEE
T ss_pred eeCC------HHHHHHHHHcCCCEe
Confidence 6543 456889999999864
No 39
>3tut_A RNA 3'-terminal phosphate cyclase; cyclase family, cyclization of RNA 3'-phosphate ENDS, transf; HET: ATP; 1.58A {Escherichia coli} PDB: 3tux_A* 3tv1_A* 3tw3_A* 3kgd_A* 1qmh_A* 1qmi_A
Probab=28.39 E-value=1.8e+02 Score=24.70 Aligned_cols=42 Identities=10% Similarity=0.101 Sum_probs=27.9
Q ss_pred ccCCcEEEeeCCCCChHHHHHHHHHHHc-CCeEEEeeeCCEEEEE
Q 030153 69 LCSNSCLLHNVPTGLSDTKAMLSILRSL-GAKIEFNERNKEILVN 112 (182)
Q Consensus 69 La~g~~~I~n~~~~s~Dv~~~l~~L~~l-Ga~I~~~~~~~~l~I~ 112 (182)
|+++ +.++--.. +..++..++++++| |+++++...++.+.|+
T Consensus 314 La~~-s~i~~~~l-T~Ht~T~i~vie~fl~v~f~i~~~~~~~~v~ 356 (358)
T 3tut_A 314 LAGA-GEFTVAHP-SSNLLTNIAVVERFLPVRFSLIETDGVTRVS 356 (358)
T ss_dssp HHTC-CEEEESSC-CHHHHHHHHHHHHHSSCCEEEEEETTEEEEE
T ss_pred hCCC-CeEEEcCC-CHHHHHHHHHHHHhcCCEEEEEecCCceEEE
Confidence 6654 33544455 68999999999995 9988753444555543
No 40
>1uou_A Thymidine phosphorylase; transferase, glycosyltransferase, chemotaxis, angiogenesis; HET: CMU; 2.11A {Homo sapiens} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 2wk6_A 2wk5_A 2j0f_A
Probab=27.89 E-value=92 Score=27.54 Aligned_cols=78 Identities=22% Similarity=0.274 Sum_probs=50.4
Q ss_pred ChHHHHHHHHHHHcCCeEEEeeeC----CEEEEEcCCCCCCCCChhhhhhhhhHHHHHHHHhhhhCCeEEEecCCCCCCC
Q 030153 83 LSDTKAMLSILRSLGAKIEFNERN----KEILVNTDGVGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGE 158 (182)
Q Consensus 83 s~Dv~~~l~~L~~lGa~I~~~~~~----~~l~I~~~~~~~~~~~~~~~~~sgts~~~l~~lla~~~~~~~~~~G~~~l~~ 158 (182)
.+++..+.++|++.|..+. ..+ ..+-+-|+++.+.. .+ ..+.+++|++| ..+..+|...+.+
T Consensus 79 ~eEiag~a~AMr~~~~~v~--~~~~~~~~~vD~~gTGGdG~~----------iS-t~~A~vvAa~G-v~VaKHGnRa~ss 144 (474)
T 1uou_A 79 LEETSVLTQALAQSGQQLE--WPEAWRQQLVDKHSTGGVGDK----------VS-LVLAPALAACG-CKVPMISGRGLGH 144 (474)
T ss_dssp HHHHHHHHHHHHTTSCCCC--CCGGGGGGBEEEEESCCTTCC----------HH-HHHHHHHHTTT-CBEEEECCCCBTT
T ss_pred HHHHHHHHHHHHHhCCcCC--cccccCCCeeEeCCCCCCCce----------eH-HHHHHHHHhCC-CCEEEECCCCCCC
Confidence 4777789999999998877 322 24444555543221 12 34557788777 4688888877763
Q ss_pred CChHHHHHHHHHC-CCEEE
Q 030153 159 RPVDLYVRGLRAL-GAAVE 176 (182)
Q Consensus 159 Rpi~~l~~~L~~l-Ga~v~ 176 (182)
.-= -.+.|+.+ |++++
T Consensus 145 ~~G--SaDvLEaLpGv~i~ 161 (474)
T 1uou_A 145 TGG--TLDKLESIPGFNVI 161 (474)
T ss_dssp BCC--HHHHHTTSTTCCCC
T ss_pred CCC--HHHHHHhCCCCCCC
Confidence 221 35888888 88765
No 41
>1brw_A PYNP, protein (pyrimidine nucleoside phosphorylase); domain movement, transferase; HET: MES; 2.10A {Geobacillus stearothermophilus} SCOP: a.46.2.1 c.27.1.1 d.41.3.1
Probab=27.13 E-value=1.1e+02 Score=26.74 Aligned_cols=78 Identities=22% Similarity=0.302 Sum_probs=50.2
Q ss_pred ChHHHHHHHHHHHcCCeEEEeeeC---CEEEEEcCCCCCCCCChhhhhhhhhHHHHHHHHhhhhCCeEEEecCCCCCCCC
Q 030153 83 LSDTKAMLSILRSLGAKIEFNERN---KEILVNTDGVGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGER 159 (182)
Q Consensus 83 s~Dv~~~l~~L~~lGa~I~~~~~~---~~l~I~~~~~~~~~~~~~~~~~sgts~~~l~~lla~~~~~~~~~~G~~~l~~R 159 (182)
.+++..+.++|++.|..+. ..+ ..+-+-|+++.+.. .| ..+.+++|++| ..+..+|...+.+.
T Consensus 52 ~eEiag~a~AM~~~~~~v~--~~~~~~~~vD~~gTGGdG~~----------iS-t~~A~vvAa~G-v~VaKHGnRa~ss~ 117 (433)
T 1brw_A 52 EEETAALTMAMVQSGEMLD--LSSIRGVKVDKHSTGGVGDT----------TT-LVLGPLVASVG-VPVAKMSGRGLGHT 117 (433)
T ss_dssp HHHHHHHHHHHHHTSCCCC--CTTSCSCCEEEEECCCSSCC----------HH-HHHHHHHHTTT-CCEEEEECCCBTTB
T ss_pred HHHHHHHHHHHHHhCCcCC--cccccCCceeeCCCCCCCcc----------hH-HHHHHHHHhCC-CcEEEECCCCCCCC
Confidence 4777789999999998877 432 24444455543221 12 34457788777 46778887777532
Q ss_pred ChHHHHHHHHHC-CCEEE
Q 030153 160 PVDLYVRGLRAL-GAAVE 176 (182)
Q Consensus 160 pi~~l~~~L~~l-Ga~v~ 176 (182)
- . -.+.|+.+ |++++
T Consensus 118 ~-G-saDvLEaL~Gv~i~ 133 (433)
T 1brw_A 118 G-G-TIDKLESVPGFHVE 133 (433)
T ss_dssp C-C-HHHHHTTSTTCCCC
T ss_pred C-C-HHHHHHHCcCceec
Confidence 2 2 35888888 88775
No 42
>3ldt_A Outer membrane protein, OMPA family protein; OMPA-like domain, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.30A {Legionella pneumophila}
Probab=26.88 E-value=1.6e+02 Score=21.70 Aligned_cols=84 Identities=13% Similarity=0.018 Sum_probs=49.5
Q ss_pred HHHHHHHcCCeEEEeeeCCEEEEEcCCCCCCCCChh-hhhhhhhHHHHHHHHhhhhCCeEEEecCCCC----------CC
Q 030153 89 MLSILRSLGAKIEFNERNKEILVNTDGVGRVEPCLE-EMRKIRGGFFVIGPLLARFGEAVVGLPGGCD----------IG 157 (182)
Q Consensus 89 ~l~~L~~lGa~I~~~~~~~~l~I~~~~~~~~~~~~~-~~~~sgts~~~l~~lla~~~~~~~~~~G~~~----------l~ 157 (182)
+-+.|+.-|++|+ ..++.+.|.=...-.|..+.. +-..+...+.-+...+.......+.+.|... |.
T Consensus 30 l~~~l~~~~v~v~--~~~~~~~i~~~~~i~F~~~sa~L~~~~~~~L~~la~~l~~~~~~~i~I~GhTD~~G~~~~N~~LS 107 (169)
T 3ldt_A 30 IIRDLQKQDIQYV--EYGDTRTLIIPTDKYFMFSSPRLNEICYPGLNNVIRLLNFYPQSTIYVAGFTDNVGSRSHKRKLS 107 (169)
T ss_dssp HHHHHHHTTCEEE--EETTEEEEEEETTTCCC-CCHHHHHHHCHHHHHHHHHHTTCTTSCEEEEEECTTSCCC--CHHHH
T ss_pred HHHHHhhCCcEEE--EeCCEEEEEecCcceeCCCCceeCHHHHHHHHHHHHHHHhCCCCeEEEEeEeCCCCCHHHHHHHH
Confidence 5566777799998 777766654322112443332 3334444454455555544444577776322 22
Q ss_pred CCChHHHHHHHHHCCCE
Q 030153 158 ERPVDLYVRGLRALGAA 174 (182)
Q Consensus 158 ~Rpi~~l~~~L~~lGa~ 174 (182)
.+|-+.+.+.|.+.|+.
T Consensus 108 ~~RA~aV~~~L~~~Gv~ 124 (169)
T 3ldt_A 108 QAQAETMMTFLWANGIA 124 (169)
T ss_dssp HHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHcCCC
Confidence 57888999999999875
No 43
>2dsj_A Pyrimidine-nucleoside (thymidine) phosphorylase; pyrimidine-nucleoside phosphorylase, structural genomics; 1.80A {Thermus thermophilus}
Probab=24.87 E-value=85 Score=27.34 Aligned_cols=78 Identities=17% Similarity=0.193 Sum_probs=49.0
Q ss_pred ChHHHHHHHHHHHcCCeEEEeeeC--CEEEEEcCCCCCCCCChhhhhhhhhHHHHHHHHhhhhCCeEEEecCCCCCCCCC
Q 030153 83 LSDTKAMLSILRSLGAKIEFNERN--KEILVNTDGVGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGERP 160 (182)
Q Consensus 83 s~Dv~~~l~~L~~lGa~I~~~~~~--~~l~I~~~~~~~~~~~~~~~~~sgts~~~l~~lla~~~~~~~~~~G~~~l~~Rp 160 (182)
.+++..+.++|++.|..+. ... +.+-+-|++..+.. .| ..+.+++|++| ..+.-+|...+.+.-
T Consensus 52 ~eEiag~a~aM~~~~~~l~--~~~~~~~vD~~gTGGdG~n----------iS-t~~a~vvAa~G-v~VaKhGnR~~ss~~ 117 (423)
T 2dsj_A 52 PEETLWLTETMARSGKVLD--LSGLPHPVDKHSSGGVGDK----------VS-LVVGPILAASG-CTFAKMSGRGLAHTG 117 (423)
T ss_dssp HHHHHHHHHHHHTSSBCCC--CTTSSSBEEEEEESSSCCS----------TH-HHHHHHHHTTT-CBEEEECCCCBTTBC
T ss_pred HHHHHHHHHHHHHhCCcCC--ccccCCceeEecCCCCCcc----------HH-HHHHHHHHhCC-CcEEEECCCCCCCCc
Confidence 4777789999999998887 432 23333355443221 12 33447788777 468888887775321
Q ss_pred hHHHHHHHHHC-CCEEE
Q 030153 161 VDLYVRGLRAL-GAAVE 176 (182)
Q Consensus 161 i~~l~~~L~~l-Ga~v~ 176 (182)
--.|.|+.+ |++++
T Consensus 118 --GsaDvLEaL~Gv~i~ 132 (423)
T 2dsj_A 118 --GTIDKLESVPGWRGE 132 (423)
T ss_dssp --CHHHHHTTSTTCCCC
T ss_pred --cHHHHHHhCCCCCCC
Confidence 146778888 87765
No 44
>1k8b_A EIF-2-beta, probable translation initiation factor 2 beta subunit; N-terminal domain, AIF2 subunit beta; NMR {Methanocaldococcus jannaschii} SCOP: d.241.1.1
Probab=23.14 E-value=85 Score=19.08 Aligned_cols=38 Identities=13% Similarity=0.337 Sum_probs=24.6
Q ss_pred cEEEeeCCCCC-----hHHHHHHH-HHHHcCCeEEEeeeCCEEEEEc
Q 030153 73 SCLLHNVPTGL-----SDTKAMLS-ILRSLGAKIEFNERNKEILVNT 113 (182)
Q Consensus 73 ~~~I~n~~~~s-----~Dv~~~l~-~L~~lGa~I~~~~~~~~l~I~~ 113 (182)
++.|.|... . .|.+..++ ++.+||+.-.+ +++.+.|.|
T Consensus 8 kTvi~Nf~~-Ia~~L~R~p~hv~ky~~~ELGt~g~i--d~~rlii~G 51 (52)
T 1k8b_A 8 RTIIRNFRE-LAKAVNRDEEFFAKYLLKETGSAGNL--EGGRLILQR 51 (52)
T ss_dssp EEEECCHHH-HHHHHHTCHHHHHHHHHHHHSSEEEE--ETTEEEEEC
T ss_pred eEEEECHHH-HHHHHCCCHHHHHHHHHHHhCCCeee--cCCEEEEeC
Confidence 466666643 2 22344444 46799999984 488888887
No 45
>2fvt_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Rhodopseudomonas palustris} SCOP: c.103.1.1
Probab=22.07 E-value=1.1e+02 Score=22.06 Aligned_cols=39 Identities=8% Similarity=-0.065 Sum_probs=26.5
Q ss_pred hhhhCCeEEEecCCCCCCCCChHHHHHHHHHCCCEEEEc
Q 030153 140 LARFGEAVVGLPGGCDIGERPVDLYVRGLRALGAAVEIS 178 (182)
Q Consensus 140 la~~~~~~~~~~G~~~l~~Rpi~~l~~~L~~lGa~v~~~ 178 (182)
+....+..+.+.|...-...+-..+.+.|++.|+.++.-
T Consensus 62 ~~~~p~pevliiGTG~~~~~l~p~l~~~l~~~GI~vE~M 100 (135)
T 2fvt_A 62 FDNANAIDTLIVGTGADVWIAPRQLREALRGVNVVLDTM 100 (135)
T ss_dssp HHTTTSCSEEEEECTTSCCCCCHHHHHHHHTTTCEEEEE
T ss_pred HhcCCCCCEEEEcCCCCCCcCCHHHHHHHHHcCCEEEEe
Confidence 333333456666644444457788999999999999864
No 46
>3sy8_A ROCR; TIM barrel phosphodiesterase-A, transcription regulator; HET: EPE; 2.50A {Pseudomonas aeruginosa}
Probab=21.89 E-value=73 Score=26.53 Aligned_cols=34 Identities=21% Similarity=0.214 Sum_probs=22.2
Q ss_pred HHHHhhhhCCeEEEecCCCCCCCCChHHHHHHHHHCCCEEE
Q 030153 136 IGPLLARFGEAVVGLPGGCDIGERPVDLYVRGLRALGAAVE 176 (182)
Q Consensus 136 l~~lla~~~~~~~~~~G~~~l~~Rpi~~l~~~L~~lGa~v~ 176 (182)
+..++..+| ..++..|.+. ...++.|+++|++.-
T Consensus 338 i~~~a~~l~-~~vvaEGVEt------~~~~~~l~~~g~~~~ 371 (400)
T 3sy8_A 338 VVALAQALG-ISLVVEGVES------DEQRVRLIELGCSIA 371 (400)
T ss_dssp HHHHHHHHT-CEEEECCCCC------HHHHHHHHHHTCCEE
T ss_pred HHHHHHHcC-CeEEEecCCc------HHHHHHHHHcCCCEE
Confidence 334444455 4577777665 445788999998763
No 47
>3h5q_A PYNP, pyrimidine-nucleoside phosphorylase; structural genomics, glycosyltransferase, transferase; HET: MSE THM; 1.94A {Staphylococcus aureus}
Probab=20.79 E-value=1.9e+02 Score=25.23 Aligned_cols=78 Identities=21% Similarity=0.225 Sum_probs=50.1
Q ss_pred ChHHHHHHHHHHHcCCeEEEeee---CCEEEEEcCCCCCCCCChhhhhhhhhHHHHHHHHhhhhCCeEEEecCCCCCCCC
Q 030153 83 LSDTKAMLSILRSLGAKIEFNER---NKEILVNTDGVGRVEPCLEEMRKIRGGFFVIGPLLARFGEAVVGLPGGCDIGER 159 (182)
Q Consensus 83 s~Dv~~~l~~L~~lGa~I~~~~~---~~~l~I~~~~~~~~~~~~~~~~~sgts~~~l~~lla~~~~~~~~~~G~~~l~~R 159 (182)
.+++..+.++|++.|..++ .. +..+-+-|+++.+. .++ ..+.+++|++| ..+..+|...+.++
T Consensus 55 ~eEiag~~~Am~~~~~~~~--~~~~~~~~vD~~gTGGdG~----------~tS-t~~A~vvAa~G-v~VaKHGnRa~ss~ 120 (436)
T 3h5q_A 55 DDERVALTMAMVNSGDMID--LSDIKGVKVDKHSTGGVGD----------TTT-LVLAPLVAAVD-VPVAKMSGRGLGHT 120 (436)
T ss_dssp HHHHHHHHHHHHTTSCCCC--CTTSCSCCEEEEECCCTTC----------CHH-HHHHHHHHHTT-CCEEEECCCCSSSS
T ss_pred HHHHHHHHHHHHHhCCcCC--ccccCCCceeecCCCCCCC----------ChH-HHHHHHHHhCC-CCEEeECCCCCCCc
Confidence 4677789999999998877 43 22333445554221 123 34557888777 46888888777643
Q ss_pred ChHHHHHHHHHC-CCEEE
Q 030153 160 PVDLYVRGLRAL-GAAVE 176 (182)
Q Consensus 160 pi~~l~~~L~~l-Ga~v~ 176 (182)
-= -.+.|+.+ |++++
T Consensus 121 ~G--saDvLEaLpGi~~~ 136 (436)
T 3h5q_A 121 GG--TIDKLEAIDGFHVE 136 (436)
T ss_dssp CC--HHHHHTTSTTCCCC
T ss_pred cc--HHHHHHhCcCCCCC
Confidence 22 36888888 88764
No 48
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=20.15 E-value=1.2e+02 Score=18.48 Aligned_cols=25 Identities=12% Similarity=0.339 Sum_probs=19.7
Q ss_pred HHHHHHHHcC---CeEEEeeeCCEEEEEcC
Q 030153 88 AMLSILRSLG---AKIEFNERNKEILVNTD 114 (182)
Q Consensus 88 ~~l~~L~~lG---a~I~~~~~~~~l~I~~~ 114 (182)
.+++++.++| ..|+ +++++++|.|.
T Consensus 22 ilikvfaelgyndinvt--wdgdtvtvegq 49 (62)
T 2gjh_A 22 ILIKVFAELGYNDINVT--WDGDTVTVEGQ 49 (62)
T ss_dssp HHHHHHHHTTCCSCEEE--ECSSCEEEEEE
T ss_pred HHHHHHHHhCcccceeE--EcCCEEEEEeE
Confidence 3678888898 4677 78889999884
Done!