Query 030154
Match_columns 182
No_of_seqs 130 out of 190
Neff 3.5
Searched_HMMs 29240
Date Mon Mar 25 15:02:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030154.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030154hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2a90_A Deltex protein; WWE dom 96.1 0.012 4E-07 50.4 6.6 74 67-145 68-166 (240)
2 3v3l_A E3 ubiquitin-protein li 94.4 0.036 1.2E-06 39.9 3.7 48 94-144 6-53 (85)
3 1ujr_A Hypothetical protein AK 91.8 0.15 5.3E-06 38.6 3.9 49 94-145 31-79 (110)
4 2dk6_A PARP11 protein; structu 90.3 0.13 4.3E-06 38.4 2.1 49 93-143 20-76 (102)
5 2a90_A Deltex protein; WWE dom 87.0 0.57 2E-05 40.0 4.2 48 93-145 26-78 (240)
6 1x4r_A PARP14 protein; WWE dom 84.7 0.68 2.3E-05 34.9 3.1 45 94-141 28-72 (99)
7 2vof_B BCL-2-binding component 50.4 6.1 0.00021 23.4 1.1 10 15-24 3-12 (26)
8 2yj1_B Alpha-beta-PUMA BH3 fol 49.5 4.5 0.00015 24.0 0.5 10 15-24 1-10 (26)
9 1x4r_A PARP14 protein; WWE dom 42.6 28 0.00097 25.9 4.0 34 57-92 56-89 (99)
10 2ra9_A Uncharacterized protein 23.7 43 0.0015 26.6 2.4 38 78-124 16-55 (150)
11 2re3_A Uncharacterized protein 23.5 35 0.0012 28.1 1.9 33 78-115 27-67 (194)
No 1
>2a90_A Deltex protein; WWE domain, metal binding protein; 2.15A {Drosophila melanogaster} SCOP: d.289.1.1 d.289.1.1
Probab=96.07 E-value=0.012 Score=50.37 Aligned_cols=74 Identities=16% Similarity=0.051 Sum_probs=53.8
Q ss_pred ceeEEecCCeeeeeeecCCC-----CcceEee------------eeeeeC---C-CCceeeCChHHHHHHHHHHhhCccc
Q 030154 67 GLYEVDLVRRHCFPVYWNGD-----NRRVLRG------------HWFARK---G-GLDWLPIREDVAEQLEIAYRSQVWH 125 (182)
Q Consensus 67 gLydVdL~~R~l~PVYW~g~-----~~eVrRG------------TWFyk~---g-~s~~~Pl~E~lAe~LE~~Y~~~~W~ 125 (182)
+.|-||+.+|+..--= .|. ...|||. .|+..+ + .+.|.||+.+++..||.+|..+.
T Consensus 68 ~~y~IDf~sMtQ~~~d-tg~~~~~~~r~VRR~~~~PsS~~g~g~vWeW~d~~~D~~G~W~~Y~~~vs~~IE~Ay~~g~-- 144 (240)
T 2a90_A 68 EQYYVNVRTMTQESEA-ETAGSGLLTIGVRRMFYAPSSPAGKGTKWEWSGGSADSNNDWRPYNMHVQSIIEDAWARGE-- 144 (240)
T ss_dssp TTCEEETTTTEEEC----------CCCBEEEEEECTTSHHHHTEEEEEECSSSSCCSSEEECCHHHHHHHHHHHHTTC--
T ss_pred CceEEeccccEEEeec-cCccccccceeeeeccccCCCcCCCccEEEEeCCCCCCCCceEECCHHHHHHHHHHHhcCC--
Confidence 7799999999875422 555 7899993 688876 3 36899999999999999999865
Q ss_pred cccccC----CccceeEEEEecCc
Q 030154 126 RRTFNL----LDFLQLELTCKALL 145 (182)
Q Consensus 126 ~~l~lp----~Ge~~~~vv~h~p~ 145 (182)
..+++. +..| +|.|.+=+
T Consensus 145 ~~v~L~~t~~G~~Y--~IDF~~Mt 166 (240)
T 2a90_A 145 QTLDLSNTHIGLPY--TINFSNLT 166 (240)
T ss_dssp SEEEHHHHTSSCCE--EEETTTTE
T ss_pred CcceeeecCCCceE--EEECCCcE
Confidence 556663 4445 67766554
No 2
>3v3l_A E3 ubiquitin-protein ligase RNF146; HET: V3L; 1.65A {Homo sapiens}
Probab=94.36 E-value=0.036 Score=39.93 Aligned_cols=48 Identities=17% Similarity=0.297 Sum_probs=33.6
Q ss_pred eeeeeCCCCceeeCChHHHHHHHHHHhhCccccccccCCccceeEEEEecC
Q 030154 94 HWFARKGGLDWLPIREDVAEQLEIAYRSQVWHRRTFNLLDFLQLELTCKAL 144 (182)
Q Consensus 94 TWFyk~g~s~~~Pl~E~lAe~LE~~Y~~~~W~~~l~lp~Ge~~~~vv~h~p 144 (182)
.|++.+++ .|.+|+++++..||++|.++. ..+++.-+-+.-+|.|.+=
T Consensus 6 ~W~w~~~~-GW~~Yd~~~s~~IE~af~~~~--~~~~l~i~G~~Y~IdF~~m 53 (85)
T 3v3l_A 6 AWYYEGRN-GWWQYDERTSRELEDAFSKGK--KNTEMLIAGFLYVADLENM 53 (85)
T ss_dssp EEEEECSS-SEEECCHHHHHHHHHHHHTTC--SEEEEEETTEEEEEETTTT
T ss_pred EEEEeCCC-CceeCCHHHHHHHHHHHHhCC--CcEEEEeCCcEEEEEchhc
Confidence 59998654 599999999999999999874 3444333333336666553
No 3
>1ujr_A Hypothetical protein AK012080; WWE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: d.289.1.1
Probab=91.77 E-value=0.15 Score=38.59 Aligned_cols=49 Identities=16% Similarity=0.304 Sum_probs=32.9
Q ss_pred eeeeeCCCCceeeCChHHHHHHHHHHhhCccccccccCCccceeEEEEecCc
Q 030154 94 HWFARKGGLDWLPIREDVAEQLEIAYRSQVWHRRTFNLLDFLQLELTCKALL 145 (182)
Q Consensus 94 TWFyk~g~s~~~Pl~E~lAe~LE~~Y~~~~W~~~l~lp~Ge~~~~vv~h~p~ 145 (182)
.||+.+++ .|.+|++..+..||++|.++. +.+++.-+-+.-.|.|.+=+
T Consensus 31 ~W~w~gd~-GW~~Yd~~~s~~IE~Ay~~g~--~~~~l~i~G~~Y~IDF~~m~ 79 (110)
T 1ujr_A 31 AWYYEGRN-GWWQYDERTSRELEDAFSKGK--KNTEMLIAGFLYVADLENMV 79 (110)
T ss_dssp EEEEECSS-SEEECCSHHHHHHHHHHHHTC--SEEEEEETTEEEEEETTTTE
T ss_pred EEEEeCCC-CCccCCHHHHHHHHHHHHcCC--CceEEEeCCcEEEEEhhHce
Confidence 69997544 699999999999999999865 33333222222256655543
No 4
>2dk6_A PARP11 protein; structural genomics, WWE domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.33 E-value=0.13 Score=38.36 Aligned_cols=49 Identities=12% Similarity=0.143 Sum_probs=32.8
Q ss_pred eeeeeeCCCCceeeCChHH-------HHHHHHHHhhCc-cccccccCCccceeEEEEec
Q 030154 93 GHWFARKGGLDWLPIREDV-------AEQLEIAYRSQV-WHRRTFNLLDFLQLELTCKA 143 (182)
Q Consensus 93 GTWFyk~g~s~~~Pl~E~l-------Ae~LE~~Y~~~~-W~~~l~lp~Ge~~~~vv~h~ 143 (182)
-.||++++.+.|.||..+. +..||++|.... ---.+...+..| +|.|++
T Consensus 20 w~W~W~de~G~W~~Y~~~~~~~~sv~S~~IE~ay~~~~~~~v~f~a~~~~Y--~IdF~~ 76 (102)
T 2dk6_A 20 WGWFYLAECGKWHMFQPDTNSQCSVSSEDIEKSFKTNPCGSISFTTSKFSY--KIDFAE 76 (102)
T ss_dssp EEEEECCSSSCCEECCCBSSTTCBCCHHHHHHHHHHCTTSEEEEEETTEEE--EEETTT
T ss_pred EEEEEECCCCceeECCccccccccccHHHHHHHHhhCCCCeEEEeeCCceE--EEECCc
Confidence 3599976667899999966 899999999733 112333333344 666643
No 5
>2a90_A Deltex protein; WWE domain, metal binding protein; 2.15A {Drosophila melanogaster} SCOP: d.289.1.1 d.289.1.1
Probab=87.05 E-value=0.57 Score=39.96 Aligned_cols=48 Identities=19% Similarity=0.302 Sum_probs=35.2
Q ss_pred eeeeeeCCCCceeeCChHHHHHHHHHHhhCccccccccCC-----ccceeEEEEecCc
Q 030154 93 GHWFARKGGLDWLPIREDVAEQLEIAYRSQVWHRRTFNLL-----DFLQLELTCKALL 145 (182)
Q Consensus 93 GTWFyk~g~s~~~Pl~E~lAe~LE~~Y~~~~W~~~l~lp~-----Ge~~~~vv~h~p~ 145 (182)
+.|.+.++ ++|.||+..+++.||++|.+.. .++.+.. +.| .|.|.+-+
T Consensus 26 ~vWEwqd~-g~W~pYs~~v~~~IE~a~~~~~--~sv~l~~~dp~l~~y--~IDf~sMt 78 (240)
T 2a90_A 26 SVWEFESR-GKWLPYSPAVSQHLERAHAKKL--TRVMLSDADPSLEQY--YVNVRTMT 78 (240)
T ss_dssp EEEEEEET-TEEEECCHHHHHHHHHHHHTTC--CEEEGGGTSTTSTTC--EEETTTTE
T ss_pred EEEEEecC-CeEeeCCHHHHHHHHHHhcCCC--ceEEEeccCCCcCce--EEeccccE
Confidence 56777655 6999999999999999998765 3454421 445 67776655
No 6
>1x4r_A PARP14 protein; WWE domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=84.69 E-value=0.68 Score=34.86 Aligned_cols=45 Identities=9% Similarity=-0.044 Sum_probs=33.1
Q ss_pred eeeeeCCCCceeeCChHHHHHHHHHHhhCccccccccCCccceeEEEE
Q 030154 94 HWFARKGGLDWLPIREDVAEQLEIAYRSQVWHRRTFNLLDFLQLELTC 141 (182)
Q Consensus 94 TWFyk~g~s~~~Pl~E~lAe~LE~~Y~~~~W~~~l~lp~Ge~~~~vv~ 141 (182)
.|-|.+ +++|.|++.-..-+||++|+.+.=.-.+.+.+..| +|-|
T Consensus 28 eWqY~d-~~~~~~FDk~TNl~LEeA~~~kk~~v~VkI~~~~y--~Vdl 72 (99)
T 1x4r_A 28 EWQYID-KNITQCFDKMTNMKLEVAWKAKKKDTVVQIHNQDF--TVDL 72 (99)
T ss_dssp EEEEEC-SSCEEECCTTHHHHHHHHHHTTCSEEEEEETTEEE--EEET
T ss_pred EEEEeC-CCeEeechHHHHHHHHHHHHccCCceEEEECCEEE--EEEc
Confidence 499965 56899999999999999998873333445666555 4444
No 7
>2vof_B BCL-2-binding component 3; BH3, apoptosis, Pro-surviVal, mitochondrion, protein- complex; 1.8A {Mus musculus} PDB: 2roc_B
Probab=50.40 E-value=6.1 Score=23.41 Aligned_cols=10 Identities=20% Similarity=0.438 Sum_probs=8.5
Q ss_pred HHHHHhhhhc
Q 030154 15 NWWKEYAECS 24 (182)
Q Consensus 15 ~~w~e~ae~s 24 (182)
.||+||+-|-
T Consensus 3 ~w~R~~~a~L 12 (26)
T 2vof_B 3 EWAREIGAQL 12 (26)
T ss_dssp HHHHHHHHHH
T ss_pred hHHHHHHHHH
Confidence 6999999874
No 8
>2yj1_B Alpha-beta-PUMA BH3 foldamer; apoptosis, membrane protein, BH3 domain, autophagy; HET: HT7 B3E B3Q HR7; 2.24A {Synthetic construct}
Probab=49.47 E-value=4.5 Score=23.95 Aligned_cols=10 Identities=0% Similarity=-0.177 Sum_probs=7.7
Q ss_pred HHHHHhhhhc
Q 030154 15 NWWKEYAECS 24 (182)
Q Consensus 15 ~~w~e~ae~s 24 (182)
+||++|+-|-
T Consensus 1 ~~~R~~~a~L 10 (26)
T 2yj1_B 1 XXARXIGAXL 10 (26)
T ss_dssp -CHHHHHHHH
T ss_pred ChHHHHHHHH
Confidence 5999999874
No 9
>1x4r_A PARP14 protein; WWE domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=42.56 E-value=28 Score=25.95 Aligned_cols=34 Identities=21% Similarity=0.221 Sum_probs=28.2
Q ss_pred CceeeEEecCceeEEecCCeeeeeeecCCCCcceEe
Q 030154 57 EERVGVPVKGGLYEVDLVRRHCFPVYWNGDNRRVLR 92 (182)
Q Consensus 57 ~e~~~V~V~ggLydVdL~~R~l~PVYW~g~~~eVrR 92 (182)
..++.|.++|-.|.||+.++...- =.|..+.|+|
T Consensus 56 k~~v~VkI~~~~y~Vdl~t~~A~~--~~G~~~~v~R 89 (99)
T 1x4r_A 56 KKDTVVQIHNQDFTVDLSTNTATA--PQGQTFTVQR 89 (99)
T ss_dssp CSEEEEEETTEEEEEETTTTEEEC--TTSCEEEEEE
T ss_pred CCceEEEECCEEEEEEcCcceeec--CCCCEEEEEE
Confidence 556679999999999999988776 5667788888
No 10
>2ra9_A Uncharacterized protein DUF1285; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.40A {Shewanella baltica}
Probab=23.74 E-value=43 Score=26.57 Aligned_cols=38 Identities=8% Similarity=0.067 Sum_probs=22.0
Q ss_pred eeeeecCCCC-cceEe-eeeeeeCCCCceeeCChHHHHHHHHHHhhCcc
Q 030154 78 CFPVYWNGDN-RRVLR-GHWFARKGGLDWLPIREDVAEQLEIAYRSQVW 124 (182)
Q Consensus 78 l~PVYW~g~~-~eVrR-GTWFyk~g~s~~~Pl~E~lAe~LE~~Y~~~~W 124 (182)
-.|-+.-.-. +.|.| |+|||.+ .|+.. .|-+.|.+-.|
T Consensus 16 ~~p~~cgd~dli~I~~dG~W~y~G-----~pI~r----~lVrLFssiL~ 55 (150)
T 2ra9_A 16 TTTPLCSEVPLFDINALGDWTYLG-----TSLPA----KFAKLFASILH 55 (150)
T ss_dssp ------CCCCSEEECTTSCEEETT-----EECCH----HHHHHHHTTEE
T ss_pred CCCCCccCcCceEECCCCcEEECC-----ccccH----HHHHHHHHheE
Confidence 3455555534 57777 9999975 58883 46677766544
No 11
>2re3_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.50A {Silicibacter pomeroyi dss-3}
Probab=23.45 E-value=35 Score=28.06 Aligned_cols=33 Identities=33% Similarity=0.718 Sum_probs=20.7
Q ss_pred eeee-ecCCC-----CcceEe-eeeeeeCCCCceeeCC-hHHHHHH
Q 030154 78 CFPV-YWNGD-----NRRVLR-GHWFARKGGLDWLPIR-EDVAEQL 115 (182)
Q Consensus 78 l~PV-YW~g~-----~~eVrR-GTWFyk~g~s~~~Pl~-E~lAe~L 115 (182)
+-|| =|+.+ .+.|.| |+|||.+ .|+. +.+.+..
T Consensus 27 ~PPv~~W~P~~cGd~di~I~~dG~W~y~G-----spI~R~~lVrLF 67 (194)
T 2re3_A 27 PAPVHLWNPPFNGDIDMRIARDGTWFYQG-----TPINRPAMVRLF 67 (194)
T ss_dssp CCCGGGCCCCEEEEEEEEECTTSCEEETT-----EECCCHHHHHHH
T ss_pred CCCcccCCCCCcCccCeEECCCCcEEeCC-----CCcCCHHHHHHH
Confidence 3444 35554 356666 9999975 5886 5665543
Done!