Query 030158
Match_columns 182
No_of_seqs 304 out of 1351
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 09:26:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030158.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/030158hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF00647 EF1G: Elongation fact 99.9 4.4E-24 9.4E-29 151.7 1.6 44 137-182 1-44 (107)
2 cd03181 GST_C_EFB1gamma GST_C 99.6 8.3E-15 1.8E-19 106.2 10.2 88 3-90 34-121 (123)
3 cd03204 GST_C_GDAP1 GST_C fami 99.5 3E-14 6.5E-19 103.0 8.2 77 3-79 23-111 (111)
4 cd03188 GST_C_Beta GST_C famil 99.5 3.7E-14 8E-19 101.1 8.6 77 4-83 38-114 (114)
5 PF00043 GST_C: Glutathione S- 99.5 4E-14 8.7E-19 98.1 8.4 73 4-77 23-95 (95)
6 cd03187 GST_C_Phi GST_C family 99.5 6.2E-14 1.3E-18 100.6 9.0 80 3-83 39-118 (118)
7 cd03196 GST_C_5 GST_C family, 99.5 4.8E-14 1E-18 102.1 8.2 79 5-83 37-115 (115)
8 cd03209 GST_C_Mu GST_C family, 99.5 1.5E-13 3.1E-18 100.1 10.0 83 6-90 32-114 (121)
9 cd03207 GST_C_8 GST_C family, 99.5 9.9E-14 2.1E-18 97.8 8.0 76 5-84 26-101 (103)
10 cd03178 GST_C_Ure2p_like GST_C 99.5 1.2E-13 2.6E-18 98.6 7.3 78 4-83 35-112 (113)
11 cd03191 GST_C_Zeta GST_C famil 99.5 3.5E-13 7.6E-18 97.6 9.5 75 8-85 43-119 (121)
12 PF13410 GST_C_2: Glutathione 99.5 3E-13 6.4E-18 88.8 7.8 69 4-72 1-69 (69)
13 cd03180 GST_C_2 GST_C family, 99.5 3.4E-13 7.4E-18 95.5 8.4 73 4-79 38-110 (110)
14 cd03198 GST_C_CLIC GST_C famil 99.5 5E-13 1.1E-17 99.6 9.3 82 5-86 25-125 (134)
15 cd03190 GST_C_ECM4_like GST_C 99.5 3.9E-13 8.4E-18 100.8 8.8 83 3-85 31-118 (142)
16 cd03186 GST_C_SspA GST_N famil 99.5 5.5E-13 1.2E-17 94.6 9.1 76 5-82 31-106 (107)
17 cd03182 GST_C_GTT2_like GST_C 99.5 4E-13 8.7E-18 96.5 8.4 75 3-79 43-117 (117)
18 cd03210 GST_C_Pi GST_C family, 99.4 8.4E-13 1.8E-17 96.9 10.1 82 7-90 33-117 (126)
19 cd03189 GST_C_GTT1_like GST_C 99.4 4.9E-13 1.1E-17 96.4 7.9 70 5-77 50-119 (119)
20 cd03185 GST_C_Tau GST_C family 99.4 7.8E-13 1.7E-17 96.2 8.9 82 5-86 31-116 (126)
21 cd03177 GST_C_Delta_Epsilon GS 99.4 6.6E-13 1.4E-17 95.9 8.3 75 6-83 35-110 (118)
22 cd03183 GST_C_Theta GST_C fami 99.4 1.1E-12 2.4E-17 95.7 9.1 81 3-85 39-122 (126)
23 cd03206 GST_C_7 GST_C family, 99.4 7.7E-13 1.7E-17 93.0 7.6 71 6-79 30-100 (100)
24 PLN02473 glutathione S-transfe 99.4 1.1E-12 2.5E-17 103.8 9.1 81 5-85 131-211 (214)
25 PRK13972 GSH-dependent disulfi 99.4 1.3E-12 2.8E-17 103.9 9.1 81 5-88 128-208 (215)
26 PLN02395 glutathione S-transfe 99.4 1.1E-12 2.4E-17 103.8 8.8 82 5-86 130-211 (215)
27 cd03201 GST_C_DHAR GST_C famil 99.4 1.1E-12 2.3E-17 96.1 7.5 80 7-86 28-111 (121)
28 cd03184 GST_C_Omega GST_C fami 99.4 1.1E-12 2.3E-17 95.9 6.8 81 6-86 29-114 (124)
29 cd03208 GST_C_Alpha GST_C fami 99.4 4.7E-12 1E-16 94.5 10.0 76 12-89 42-119 (137)
30 PRK10542 glutathionine S-trans 99.4 2.7E-12 5.7E-17 100.6 8.7 75 8-85 123-197 (201)
31 TIGR01262 maiA maleylacetoacet 99.4 4.3E-12 9.4E-17 100.0 9.1 76 8-86 128-205 (210)
32 PRK09481 sspA stringent starva 99.3 6.4E-12 1.4E-16 99.8 9.1 80 5-85 123-202 (211)
33 PRK10357 putative glutathione 99.3 7.2E-12 1.6E-16 98.4 9.0 80 5-85 121-200 (202)
34 PTZ00057 glutathione s-transfe 99.3 7.3E-12 1.6E-16 99.1 7.8 78 8-87 122-201 (205)
35 cd03203 GST_C_Lambda GST_C fam 99.3 1.2E-11 2.6E-16 90.1 7.7 73 12-85 33-111 (120)
36 cd03194 GST_C_3 GST_C family, 99.3 3.2E-11 6.9E-16 87.2 8.7 70 9-84 41-113 (114)
37 cd03179 GST_C_1 GST_C family, 99.3 1.7E-11 3.6E-16 86.1 7.0 69 3-74 37-105 (105)
38 cd03195 GST_C_4 GST_C family, 99.3 3.3E-11 7.1E-16 87.1 8.3 72 7-84 40-112 (114)
39 PRK11752 putative S-transferas 99.2 4.7E-11 1E-15 98.3 9.2 80 7-86 176-259 (264)
40 cd00299 GST_C_family Glutathio 99.2 5.3E-11 1.2E-15 82.0 7.4 70 4-73 31-100 (100)
41 cd03193 GST_C_Metaxin GST_C fa 99.2 8.2E-11 1.8E-15 80.8 8.2 69 6-74 16-88 (88)
42 PLN02378 glutathione S-transfe 99.2 3.7E-11 8.1E-16 95.7 6.7 81 9-89 118-203 (213)
43 TIGR00862 O-ClC intracellular 99.2 1.8E-10 3.9E-15 93.5 9.1 81 8-88 122-223 (236)
44 PF14497 GST_C_3: Glutathione 99.2 1.6E-10 3.5E-15 81.1 7.5 66 6-75 32-99 (99)
45 cd03200 GST_C_JTV1 GST_C famil 99.1 1.4E-10 3.1E-15 81.5 7.0 59 12-76 38-96 (96)
46 COG0625 Gst Glutathione S-tran 99.1 2E-10 4.4E-15 90.9 8.6 74 4-80 126-199 (211)
47 cd03205 GST_C_6 GST_C family, 99.1 2.4E-10 5.2E-15 80.0 7.7 67 4-73 32-98 (98)
48 cd03192 GST_C_Sigma_like GST_C 99.1 1.3E-10 2.8E-15 81.8 6.2 68 4-73 34-104 (104)
49 cd03202 GST_C_etherase_LigE GS 99.1 2.5E-10 5.4E-15 83.7 7.6 69 7-76 56-124 (124)
50 KOG0867 Glutathione S-transfer 99.1 6.6E-10 1.4E-14 89.6 8.4 83 2-84 126-208 (226)
51 PLN02817 glutathione dehydroge 99.0 9E-10 1.9E-14 90.9 8.7 77 10-86 172-252 (265)
52 PRK15113 glutathione S-transfe 99.0 7E-10 1.5E-14 88.2 7.6 75 6-86 134-209 (214)
53 KOG4420 Uncharacterized conser 99.0 1.2E-09 2.6E-14 88.6 7.8 82 5-86 201-288 (325)
54 PRK10387 glutaredoxin 2; Provi 99.0 6.8E-10 1.5E-14 87.5 5.7 68 8-80 141-208 (210)
55 PLN02907 glutamate-tRNA ligase 98.9 2E-09 4.2E-14 99.6 7.6 66 13-78 94-159 (722)
56 cd03212 GST_C_Metaxin1_3 GST_C 98.9 1.1E-08 2.4E-13 76.5 7.9 70 6-75 61-134 (137)
57 cd03211 GST_C_Metaxin2 GST_C f 98.8 1.6E-08 3.5E-13 74.4 6.3 67 7-73 55-125 (126)
58 KOG1695 Glutathione S-transfer 98.8 3.3E-08 7.1E-13 78.7 8.5 78 10-88 124-203 (206)
59 KOG0406 Glutathione S-transfer 98.7 4.6E-08 1E-12 78.8 8.3 82 5-86 125-212 (231)
60 TIGR02182 GRXB Glutaredoxin, G 98.7 1.7E-08 3.7E-13 80.2 4.8 66 8-79 140-206 (209)
61 cd03197 GST_C_mPGES2 GST_C fam 98.7 6.6E-08 1.4E-12 73.1 7.0 64 10-75 80-145 (149)
62 KOG0868 Glutathione S-transfer 98.6 6.1E-08 1.3E-12 74.8 5.6 77 7-86 130-208 (217)
63 COG0435 ECM4 Predicted glutath 98.6 4.7E-08 1E-12 80.1 4.0 81 3-83 199-284 (324)
64 KOG2903 Predicted glutathione 98.3 2.2E-07 4.8E-12 75.6 2.3 81 3-83 197-286 (319)
65 KOG1422 Intracellular Cl- chan 98.1 3.9E-06 8.5E-11 66.3 3.9 81 10-90 124-210 (221)
66 PF14834 GST_C_4: Glutathione 98.0 4.7E-05 1E-09 54.9 7.8 72 7-84 41-113 (117)
67 KOG3027 Mitochondrial outer me 97.4 0.0005 1.1E-08 54.6 6.6 74 3-76 171-248 (257)
68 KOG1147 Glutamyl-tRNA syntheta 97.2 0.0002 4.3E-09 63.9 2.4 76 11-86 90-165 (712)
69 KOG4244 Failed axon connection 97.1 0.00064 1.4E-08 55.8 4.4 65 10-75 204-272 (281)
70 PF04399 Glutaredoxin2_C: Glut 96.8 0.005 1.1E-07 45.7 6.3 67 8-79 58-124 (132)
71 KOG3028 Translocase of outer m 96.6 0.012 2.5E-07 49.5 8.0 70 7-76 161-234 (313)
72 cd03199 GST_C_GRX2 GST_C famil 96.2 0.026 5.6E-07 41.7 6.8 66 9-79 60-125 (128)
73 KOG3029 Glutathione S-transfer 96.0 0.015 3.3E-07 48.3 5.6 65 10-75 289-354 (370)
74 PF11801 Tom37_C: Tom37 C-term 90.1 0.97 2.1E-05 34.8 5.8 39 13-51 112-154 (168)
75 KOG1668 Elongation factor 1 be 87.8 0.38 8.3E-06 38.9 2.1 60 15-81 10-69 (231)
76 COG2999 GrxB Glutaredoxin 2 [P 77.6 5.7 0.00012 31.2 4.9 67 9-80 142-208 (215)
77 PF09868 DUF2095: Uncharacteri 74.6 1.8 3.8E-05 31.5 1.3 25 137-161 2-26 (128)
78 KOG0867 Glutathione S-transfer 53.8 2.2 4.7E-05 34.3 -1.7 78 9-90 91-169 (226)
79 PF11732 Thoc2: Transcription- 44.7 65 0.0014 21.6 4.6 63 8-74 14-76 (77)
80 KOG1663 O-methyltransferase [S 37.7 10 0.00022 31.0 -0.2 17 146-162 146-165 (237)
81 PF11120 DUF2636: Protein of u 35.6 64 0.0014 20.7 3.3 47 36-82 1-47 (62)
82 PRK15371 effector protein YopJ 35.3 1E+02 0.0023 25.9 5.4 44 9-53 23-66 (287)
83 PF00392 GntR: Bacterial regul 35.0 42 0.00091 20.9 2.5 31 15-45 3-34 (64)
84 KOG0939 E3 ubiquitin-protein l 32.9 21 0.00046 33.4 1.0 33 142-177 593-630 (720)
85 TIGR03493 cellullose_BcsF cell 32.0 80 0.0017 20.2 3.3 45 36-80 1-45 (62)
86 COG5021 HUL4 Ubiquitin-protein 31.4 31 0.00066 33.5 1.9 30 146-177 751-783 (872)
87 PF04255 DUF433: Protein of un 29.2 33 0.00071 21.2 1.2 39 24-67 7-45 (56)
88 PF12643 MazG-like: MazG-like 28.4 64 0.0014 22.6 2.7 38 37-75 40-89 (98)
89 COG3433 Aryl carrier domain [S 28.3 1.5E+02 0.0032 19.7 4.2 40 37-76 28-69 (74)
90 PF06947 DUF1290: Protein of u 26.4 59 0.0013 22.3 2.1 19 32-51 55-73 (88)
91 PF00357 Integrin_alpha: Integ 25.2 32 0.0007 15.7 0.4 8 155-162 5-12 (15)
92 cd06891 PX_Vps17p The phosphoi 25.0 49 0.0011 24.8 1.7 19 63-81 111-129 (140)
93 KOG2961 Predicted hydrolase (H 23.8 48 0.001 25.6 1.4 43 30-74 143-185 (190)
94 PF04827 Plant_tran: Plant tra 23.2 90 0.002 24.9 2.9 43 7-49 150-194 (205)
95 PF08674 AChE_tetra: Acetylcho 20.7 50 0.0011 18.9 0.7 8 152-159 18-25 (37)
96 PF00758 EPO_TPO: Erythropoiet 20.6 26 0.00057 27.0 -0.6 15 144-158 38-52 (165)
No 1
>PF00647 EF1G: Elongation factor 1 gamma, conserved domain; InterPro: IPR001662 Translation elongation factors are responsible for two main processes during protein synthesis on the ribosome [, , ]. EF1A (or EF-Tu) is responsible for the selection and binding of the cognate aminoacyl-tRNA to the A-site (acceptor site) of the ribosome. EF2 (or EF-G) is responsible for the translocation of the peptidyl-tRNA from the A-site to the P-site (peptidyl-tRNA site) of the ribosome, thereby freeing the A-site for the next aminoacyl-tRNA to bind. Elongation factors are responsible for achieving accuracy of translation and both EF1A and EF2 are remarkably conserved throughout evolution. Elongation factor EF1B (also known as EF-Ts or EF-1beta/gamma/delta) is a nucleotide exchange factor that is required to regenerate EF1A from its inactive form (EF1A-GDP) to its active form (EF1A-GTP). EF1A is then ready to interact with a new aminoacyl-tRNA to begin the cycle again. EF1B is more complex in eukaryotes than in bacteria, and can consist of three subunits: EF1B-alpha (or EF-1beta), EF1B-gamma (or EF-1gamma) and EF1B-beta (or EF-1delta) []. This entry represents a conserved domain usually found near the C terminus of EF1B-gamma chains, a peptide of 410-440 residues. The gamma chain appears to play a role in anchoring the EF1B complex to the beta and delta chains and to other cellular components. More information about these proteins can be found at Protein of the Month: Elongation Factors [].; GO: 0003746 translation elongation factor activity, 0006414 translational elongation, 0005853 eukaryotic translation elongation factor 1 complex; PDB: 1PBU_A.
Probab=99.88 E-value=4.4e-24 Score=151.71 Aligned_cols=44 Identities=50% Similarity=0.810 Sum_probs=30.6
Q ss_pred CCCCCCCCCCCCCCchhhhhhhhcCCCccchhhhhhhhhhhcCCCC
Q 030158 137 KPKNPLDLLPPSKMILDDWKRLYSNTKSNFREVAIKGTLSSLTRLT 182 (182)
Q Consensus 137 k~k~pl~~lp~~~f~ld~~Kr~ysn~~~~~~~~a~~~fw~~~d~~~ 182 (182)
|+|||||+||+|+|+||+|||+|||+|| |++||||||||||+..
T Consensus 1 K~k~Pl~~lp~s~f~lD~wKr~YSN~d~--~~~a~p~Fwe~~d~eg 44 (107)
T PF00647_consen 1 KPKNPLDLLPKSTFVLDEWKRKYSNEDT--RTVAMPWFWENFDPEG 44 (107)
T ss_dssp ----GGGSS----S-HHHHHHHHHHS-G--GGTHHHHHHSS--TTT
T ss_pred CCCChHHHCCCCCCCHHHhhhhhcCCCc--hhhHHHHHHHhCCccc
Confidence 6899999999999999999999999999 8999999999999863
No 2
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.60 E-value=8.3e-15 Score=106.21 Aligned_cols=88 Identities=40% Similarity=0.642 Sum_probs=78.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcChhHHhh
Q 030158 3 CMKAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKF 82 (182)
Q Consensus 3 nk~~~~~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P~~k~~ 82 (182)
+....+.....+...|+.||++|..++||+|+++|+|||++++++.++....++..+...+|+|.+|+++|.++|+|+.+
T Consensus 34 ~~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~siaDi~l~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~~~ 113 (123)
T cd03181 34 NKKSVEAALEELDRVLGVLEERLLKRTYLVGERLTLADIFVAGALLLGFTYVFDKEWRAKYPNVTRWFNTVVNQPIFKAV 113 (123)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHccCceeccCCccHHHHHHHHHHHHHHHHHcCHHHHHhChHHHHHHHHHHcCHHHHHH
Confidence 44567788899999999999999999999999999999999999998765555544457899999999999999999999
Q ss_pred hccccccC
Q 030158 83 LGDFKQAE 90 (182)
Q Consensus 83 ~~~~~~~~ 90 (182)
+.+..+|+
T Consensus 114 ~~~~~~~~ 121 (123)
T cd03181 114 FGEVKLCE 121 (123)
T ss_pred cCCCCcCC
Confidence 99999987
No 3
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.54 E-value=3e-14 Score=102.95 Aligned_cols=77 Identities=23% Similarity=0.317 Sum_probs=65.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhccCC----------CeecCCCCCHHHHHHHHHHHHHHHhhcCchh--hccChhHHHHH
Q 030158 3 CMKAEEGAVAALKRALDALNIHLASN----------TYLVGHSVTLADIVMICNLYYGFKLIMTKSF--TSEFPHVERYF 70 (182)
Q Consensus 3 nk~~~~~~~~~l~~~l~~Le~~L~~~----------~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~--~~~~P~L~rW~ 70 (182)
|...++.....+.+.|+.||.+|.++ .||+|+++|+|||++++++.++....++... +..||+|.+|+
T Consensus 23 ~~~~i~~~~~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~~~~~~~~~~~~~~~~P~l~~w~ 102 (111)
T cd03204 23 NVEYLKKILDELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRLKFLGLSRRYWGNGKRPNLEAYF 102 (111)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHHHHcCccccccccccChHHHHHH
Confidence 56677889999999999999999865 3999999999999999999988655444221 36899999999
Q ss_pred HHHhcChhH
Q 030158 71 WTVANQPKI 79 (182)
Q Consensus 71 ~~v~~~P~~ 79 (182)
++|.+||+|
T Consensus 103 ~rv~aRpsf 111 (111)
T cd03204 103 ERVLQRESF 111 (111)
T ss_pred HHHHcCCCC
Confidence 999999975
No 4
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.54 E-value=3.7e-14 Score=101.11 Aligned_cols=77 Identities=25% Similarity=0.410 Sum_probs=66.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcChhHHhhh
Q 030158 4 MKAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFL 83 (182)
Q Consensus 4 k~~~~~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P~~k~~~ 83 (182)
+...+.....+.+.+..||++|.+++||+|+++|+|||++++.+.++....++ ...||+|.+|+++|.++|+|++++
T Consensus 38 ~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~aDi~~~~~~~~~~~~~~~---~~~~p~l~~w~~~~~~~p~~k~~~ 114 (114)
T cd03188 38 EEVKAAARERLAARLAYLDAQLAGGPYLLGDRFSVADAYLFVVLRWAPGVGLD---LSDWPNLAAYLARVAARPAVQAAL 114 (114)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCeeeCCCcchHHHHHHHHHHHHhhcCCC---hhhChHHHHHHHHHHhCHHhHhhC
Confidence 44456778899999999999999889999999999999999998876544333 468999999999999999998764
No 5
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.54 E-value=4e-14 Score=98.09 Aligned_cols=73 Identities=27% Similarity=0.383 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcCh
Q 030158 4 MKAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQP 77 (182)
Q Consensus 4 k~~~~~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P 77 (182)
+..++.....+.+.|..+|.+|.+++||+|+++|+|||++++.+.++.....+.. ...||+|.+|+++|.++|
T Consensus 23 ~~~~~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~ADi~~~~~~~~~~~~~~~~~-~~~~P~l~~w~~~~~~~P 95 (95)
T PF00043_consen 23 EEMVEEARAKVPRYLEVLEKRLKGGPYLVGDKLTIADIALFPMLDWLERLGPDFL-FEKFPKLKKWYERMFARP 95 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSSSSSBSS-CHHHHHHHHHHHHHHHHTTTTT-HTTSHHHHHHHHHHHTSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCeeeccCCchhHHHHHHHHHHHHHhCCCcc-cccCHHHHHHHHHHHcCC
Confidence 3467778899999999999999999999999999999999999999877654421 389999999999999987
No 6
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.53 E-value=6.2e-14 Score=100.64 Aligned_cols=80 Identities=29% Similarity=0.385 Sum_probs=67.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcChhHHhh
Q 030158 3 CMKAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKF 82 (182)
Q Consensus 3 nk~~~~~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P~~k~~ 82 (182)
+...++.+...+.+.++.||++|.+++||+|+++|+|||++++++.++.... ....+..||+|.+|+++|.++|+++.+
T Consensus 39 ~~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~~~~~~-~~~~~~~~p~l~~~~~~~~~~p~~~~~ 117 (118)
T cd03187 39 DEAVVEENEEKLKKVLDVYEARLSKSKYLAGDSFTLADLSHLPYLQYLMATP-FAKLFDSRPHVKAWWEDISARPAWKKV 117 (118)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcccCcccCCCCccHHHHHHHHHHHHHHHcc-chhhhhcCchHHHHHHHHHhCHHHHhh
Confidence 4556677888999999999999998999999999999999999988775421 122356899999999999999999875
Q ss_pred h
Q 030158 83 L 83 (182)
Q Consensus 83 ~ 83 (182)
+
T Consensus 118 ~ 118 (118)
T cd03187 118 L 118 (118)
T ss_pred C
Confidence 3
No 7
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.52 E-value=4.8e-14 Score=102.15 Aligned_cols=79 Identities=20% Similarity=0.238 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcChhHHhhh
Q 030158 5 KAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFL 83 (182)
Q Consensus 5 ~~~~~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P~~k~~~ 83 (182)
+..+.+...+.+.+..||++|.+++||+|+++|+|||++++++.++.........+..||+|.+|+++|.++|+|++++
T Consensus 37 ~~~~~~~~~i~~~l~~le~~L~~~~yl~Gd~~tlADi~l~~~l~~~~~~~~~~~~~~~~P~L~~w~~r~~~rpa~~~~~ 115 (115)
T cd03196 37 ESEEEYRQQAEAFLKDLEARLQQHSYLLGDKPSLADWAIFPFVRQFAHVDPKWFDQSPYPRLRRWLNGFLASPLFSKIM 115 (115)
T ss_pred ccHHHHHHHHHHHHHHHHHHHccCCccCCCCccHHHHHHHHHHHHHHHhhhcccCcccCHHHHHHHHHHHcChHHHhhC
Confidence 3567788999999999999999999999999999999999988765432111111478999999999999999999763
No 8
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=99.51 E-value=1.5e-13 Score=100.10 Aligned_cols=83 Identities=16% Similarity=0.271 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcChhHHhhhcc
Q 030158 6 AEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLGD 85 (182)
Q Consensus 6 ~~~~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P~~k~~~~~ 85 (182)
..+.....+...+..||++|.+++||+|+++|+|||++++++.++... .......||+|.+|+++|.++|++++++..
T Consensus 32 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~T~aDi~l~~~~~~~~~~--~~~~~~~~P~l~~~~~rv~~~p~vk~~~~~ 109 (121)
T cd03209 32 LKPDYLAKLPDKLKLFSDFLGDRPWFAGDKITYVDFLLYEALDQHRIF--EPDCLDAFPNLKDFLERFEALPKISAYMKS 109 (121)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCcCCCCccHHHHHHHHHHHHHHHh--CccccccChHHHHHHHHHHHCHHHHHHHhc
Confidence 345567788999999999999889999999999999999998887543 222357899999999999999999999988
Q ss_pred ccccC
Q 030158 86 FKQAE 90 (182)
Q Consensus 86 ~~~~~ 90 (182)
.+...
T Consensus 110 ~~~~~ 114 (121)
T cd03209 110 DRFIK 114 (121)
T ss_pred ccCcC
Confidence 87665
No 9
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.50 E-value=9.9e-14 Score=97.81 Aligned_cols=76 Identities=24% Similarity=0.407 Sum_probs=66.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcChhHHhhhc
Q 030158 5 KAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLG 84 (182)
Q Consensus 5 ~~~~~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P~~k~~~~ 84 (182)
..++.+...+...++.||.+|.+++||+|+++|+|||++++++.++.... +...+|+|.+|+++|.++|+++.++.
T Consensus 26 ~~~~~~~~~~~~~l~~le~~l~~~~~l~g~~~t~aDi~~~~~~~~~~~~~----~~~~~p~l~~w~~~~~~~p~~~~~~~ 101 (103)
T cd03207 26 PARMAGFGSYDDVLAALEQALAKGPYLLGERFTAADVLVGSPLGWGLQFG----LLPERPAFDAYIARITDRPAFQRAAA 101 (103)
T ss_pred chhhhhhhhHHHHHHHHHHHHccCCcccCCccCHHHHHHHHHHHHHHHcC----CCCCChHHHHHHHHHHcCHHHHHHhc
Confidence 34567788899999999999999999999999999999999999876532 24689999999999999999998765
No 10
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=99.48 E-value=1.2e-13 Score=98.61 Aligned_cols=78 Identities=26% Similarity=0.316 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcChhHHhhh
Q 030158 4 MKAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFL 83 (182)
Q Consensus 4 k~~~~~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P~~k~~~ 83 (182)
+..++.....+.+.|+.||++|.+++||+|+++|+|||++++++.+......+ +...||+|.+|+++|.++|+++.++
T Consensus 35 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~~~~~~~~--~~~~~p~l~~w~~~~~~~p~~~~~~ 112 (113)
T cd03178 35 PYAIERYTNEAKRLYGVLDKRLAGRDYLAGDEYSIADIAIFPWVRRLEWIGID--DLDDFPNVKRWLDRIAARPAVQRGL 112 (113)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHccCCcccCCCCCeeeeeHHHHHHHHHhcccc--chhhchHHHHHHHHHhhCHHHHHhc
Confidence 45667788999999999999999889999999999999999999887544332 4678999999999999999999864
No 11
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=99.47 E-value=3.5e-13 Score=97.62 Aligned_cols=75 Identities=23% Similarity=0.286 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHHHHHHhccC--CCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcChhHHhhhcc
Q 030158 8 EGAVAALKRALDALNIHLAS--NTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLGD 85 (182)
Q Consensus 8 ~~~~~~l~~~l~~Le~~L~~--~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P~~k~~~~~ 85 (182)
+.....+.+.|..||++|.+ ++||+|+++|+|||++++++.++....++ ...||+|.+|+++|.++|+|+.++..
T Consensus 43 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~~~~~~~~~~~---~~~~p~l~~w~~~~~~~p~~~~~~~~ 119 (121)
T cd03191 43 AWYRHWIARGFAALEKLLAQTAGKFCFGDEPTLADICLVPQVYNARRFGVD---LSPYPTIARINEACLELPAFQAAHPD 119 (121)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeecCCcCCHHHHHHHHHHHHHHHhCCC---cccCcHHHHHHHHHHhChhHHHhCcC
Confidence 34556789999999999984 57999999999999999999877655443 47899999999999999999998754
No 12
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.46 E-value=3e-13 Score=88.83 Aligned_cols=69 Identities=30% Similarity=0.343 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHH
Q 030158 4 MKAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWT 72 (182)
Q Consensus 4 k~~~~~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~ 72 (182)
+..++++.+.+...|+.||.+|.+++||+|+++|+|||++++.+.++.....+..+...||+|.+|++|
T Consensus 1 ~~~~~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~r 69 (69)
T PF13410_consen 1 PAAVERARAQLEAALDALEDHLADGPFLFGDRPSLADIALAPFLWRLRFVGPDFDLLEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSSBTTBSS--HHHHHHHHHHHHHHHCTHTCCHHTTSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHhCcCcCccccCHHHHHHHhC
Confidence 356789999999999999999999999999999999999999999887765444567899999999986
No 13
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.46 E-value=3.4e-13 Score=95.50 Aligned_cols=73 Identities=32% Similarity=0.534 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcChhH
Q 030158 4 MKAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKI 79 (182)
Q Consensus 4 k~~~~~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P~~ 79 (182)
+..++...+.+.+.|+.||++|.+++||+|+++|+|||++++++........ .+..||+|.+|+++|.++|+|
T Consensus 38 ~~~~~~~~~~~~~~l~~lE~~L~~~~~l~g~~~t~aDi~~~~~~~~~~~~~~---~~~~~p~l~~~~~~~~~~p~~ 110 (110)
T cd03180 38 PAAIAASLAAWAKLMAILDAQLAGRPYLAGDRFTLADIPLGCSAYRWFELPI---ERPPLPHLERWYARLRARPAF 110 (110)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHHHHHHccc---ccccCchHHHHHHHHHhCCCC
Confidence 3455677889999999999999988999999999999999998854433322 267899999999999999975
No 14
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=99.45 E-value=5e-13 Score=99.57 Aligned_cols=82 Identities=20% Similarity=0.179 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhccC----------------CCeecCCCCCHHHHHHHHHHHHHHHh---hcCchhhccChh
Q 030158 5 KAEEGAVAALKRALDALNIHLAS----------------NTYLVGHSVTLADIVMICNLYYGFKL---IMTKSFTSEFPH 65 (182)
Q Consensus 5 ~~~~~~~~~l~~~l~~Le~~L~~----------------~~fLvGe~lTlADi~l~~~l~~~~~~---~~~~~~~~~~P~ 65 (182)
...+.....+...|..||.+|.+ +.||+|+++|+|||++++.+.++... ..+......||+
T Consensus 25 ~~~e~~~~~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~~~~~~~~~g~~i~~~~P~ 104 (134)
T cd03198 25 ALNENLEKGLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFEIPADLTG 104 (134)
T ss_pred hhhHHHHHHHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCccccCHH
Confidence 45567778899999999999987 67999999999999999998876321 112222478999
Q ss_pred HHHHHHHHhcChhHHhhhccc
Q 030158 66 VERYFWTVANQPKIKKFLGDF 86 (182)
Q Consensus 66 L~rW~~~v~~~P~~k~~~~~~ 86 (182)
|.+|+++|.+||+|+.++...
T Consensus 105 L~aw~~ri~aRPsfk~t~~~~ 125 (134)
T cd03198 105 LWRYLKNAYQREEFTNTCPAD 125 (134)
T ss_pred HHHHHHHHHCCHHHHHHcCCH
Confidence 999999999999999987644
No 15
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.45 E-value=3.9e-13 Score=100.84 Aligned_cols=83 Identities=24% Similarity=0.299 Sum_probs=68.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhh---c--CchhhccChhHHHHHHHHhcCh
Q 030158 3 CMKAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLI---M--TKSFTSEFPHVERYFWTVANQP 77 (182)
Q Consensus 3 nk~~~~~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~---~--~~~~~~~~P~L~rW~~~v~~~P 77 (182)
++...+.+...+...|+.||++|.+++||+|+++|+|||++++++.++.... . +......||+|.+|+++|.++|
T Consensus 31 ~~~~~~~~~~~l~~~l~~LE~~L~~~~yl~Gd~~TlADi~l~~~l~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~P 110 (142)
T cd03190 31 TQEAYDEAVDELFEALDRLEELLSDRRYLLGDRLTEADIRLFTTLIRFDAVYVQHFKCNLKRIRDYPNLWNYLRRLYQNP 110 (142)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHccCCeeeCCCccHHHHHHHHHHHHHHHHhhhhcccccchhhhCchHHHHHHHHhcCc
Confidence 3556677888999999999999998999999999999999999987653211 1 1122468999999999999999
Q ss_pred hHHhhhcc
Q 030158 78 KIKKFLGD 85 (182)
Q Consensus 78 ~~k~~~~~ 85 (182)
+++.++..
T Consensus 111 ~~k~~~~~ 118 (142)
T cd03190 111 GVAETTNF 118 (142)
T ss_pred hHhhhcCH
Confidence 99998765
No 16
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.45 E-value=5.5e-13 Score=94.59 Aligned_cols=76 Identities=21% Similarity=0.221 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcChhHHhh
Q 030158 5 KAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKF 82 (182)
Q Consensus 5 ~~~~~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P~~k~~ 82 (182)
...+.+...+...|..||.+|.+++||+|+++|+|||++++.+.++...+++ ....+|+|.+|+++|.++|+++.+
T Consensus 31 ~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~~~~~--~~~~~p~l~~w~~~~~~rpa~~~~ 106 (107)
T cd03186 31 KEAEKARKELRESLLALAPVFAHKPYFMSEEFSLVDCALAPLLWRLPALGIE--LPKQAKPLKDYMERVFARDSFQKS 106 (107)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCcHHHHHHHHHHHHHHHcCCC--CcccchHHHHHHHHHHCCHHHHHh
Confidence 3456678899999999999999999999999999999999998655433322 234799999999999999999875
No 17
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=99.45 E-value=4e-13 Score=96.47 Aligned_cols=75 Identities=23% Similarity=0.343 Sum_probs=64.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcChhH
Q 030158 3 CMKAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKI 79 (182)
Q Consensus 3 nk~~~~~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P~~ 79 (182)
+....+.+...+.++|..||++|..++|++|+++|+|||++++.+.++...+++ +...||+|.+|+++|.++|++
T Consensus 43 ~~~~~~~~~~~l~~~l~~le~~L~~~~~l~gd~~t~aDi~l~~~~~~~~~~~~~--~~~~~p~l~~w~~~~~~~p~~ 117 (117)
T cd03182 43 VPEWGERSKARAADFLAYLDTRLAGSPYVAGDRFTIADITAFVGLDFAKVVKLR--VPEELTHLRAWYDRMAARPSA 117 (117)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHhHHHHhcCCC--CccccHHHHHHHHHHHhccCC
Confidence 355678888999999999999999889999999999999999999887554433 356899999999999999974
No 18
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=99.45 E-value=8.4e-13 Score=96.85 Aligned_cols=82 Identities=18% Similarity=0.341 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHHHHHHhccC---CCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcChhHHhhh
Q 030158 7 EEGAVAALKRALDALNIHLAS---NTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFL 83 (182)
Q Consensus 7 ~~~~~~~l~~~l~~Le~~L~~---~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P~~k~~~ 83 (182)
.......+...|..||++|.. ++||+|+++|+|||++++++.++... .......||+|.+|+++|.++|+|+.++
T Consensus 33 ~~~~~~~~~~~l~~le~~L~~~~~~~~l~G~~~T~ADi~l~~~~~~~~~~--~~~~~~~~P~l~~~~~rv~~~p~v~~~~ 110 (126)
T cd03210 33 KDDYIKDLPEQLKPFEKLLSKNNGKGFIVGDKISFADYNLFDLLDIHLVL--APGCLDAFPLLKAFVERLSARPKLKAYL 110 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCccHHHHHHHHHHHHHHHh--ChHhhhcChHHHHHHHHHHhCcHHHHHH
Confidence 345567788999999999974 48999999999999999998876432 1223678999999999999999999999
Q ss_pred ccccccC
Q 030158 84 GDFKQAE 90 (182)
Q Consensus 84 ~~~~~~~ 90 (182)
.......
T Consensus 111 ~~~~~~~ 117 (126)
T cd03210 111 ESDAFKN 117 (126)
T ss_pred hCcCCCC
Confidence 8876655
No 19
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.43 E-value=4.9e-13 Score=96.41 Aligned_cols=70 Identities=27% Similarity=0.366 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcCh
Q 030158 5 KAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQP 77 (182)
Q Consensus 5 ~~~~~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P 77 (182)
...+.+...+...|+.||.+|.+++||+|+++|+|||++++.+.++..... .+..||+|.+|+++|.++|
T Consensus 50 ~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~l~~~~~~~~~~~~---~~~~~p~l~~w~~~~~~~p 119 (119)
T cd03189 50 VLAGFINPELKKHLDFLEDRLAKKGYFVGDKLTAADIMMSFPLEAALARGP---LLEKYPNIAAYLERIEARP 119 (119)
T ss_pred HHHHHHhHHHHHHHHHHHHHHccCCCCCCCCCCHHHHHHHHHHHHHHHcCc---ccccCchHHHHHHHHhcCC
Confidence 344566778999999999999999999999999999999999988754433 2678999999999999986
No 20
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.43 E-value=7.8e-13 Score=96.15 Aligned_cols=82 Identities=17% Similarity=0.147 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHh--hcCch--hhccChhHHHHHHHHhcChhHH
Q 030158 5 KAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKL--IMTKS--FTSEFPHVERYFWTVANQPKIK 80 (182)
Q Consensus 5 ~~~~~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~--~~~~~--~~~~~P~L~rW~~~v~~~P~~k 80 (182)
...+.....+...++.||++|..++||+|+++|+|||++++++.++... ..+.. ....||+|.+|+++|.++|+++
T Consensus 31 ~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~ADi~l~~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p~~~ 110 (126)
T cd03185 31 EEREKAKEEALEALKVLEEELGGKPFFGGDTIGYVDIALGSFLGWFRAYEEVGGVKLLDEEKTPLLAAWAERFLELEAVK 110 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHcCccccCcccCchHHHHHHHHHhccHHH
Confidence 3455678889999999999999899999999999999999999886432 12222 2467999999999999999999
Q ss_pred hhhccc
Q 030158 81 KFLGDF 86 (182)
Q Consensus 81 ~~~~~~ 86 (182)
.++...
T Consensus 111 ~~~~~~ 116 (126)
T cd03185 111 EVLPDR 116 (126)
T ss_pred HhCCCH
Confidence 987653
No 21
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.43 E-value=6.6e-13 Score=95.95 Aligned_cols=75 Identities=23% Similarity=0.375 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHH-hhcCchhhccChhHHHHHHHHhcChhHHhhh
Q 030158 6 AEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFK-LIMTKSFTSEFPHVERYFWTVANQPKIKKFL 83 (182)
Q Consensus 6 ~~~~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~-~~~~~~~~~~~P~L~rW~~~v~~~P~~k~~~ 83 (182)
..+.+...+.+.|..||.+|.+++||+|+++|+|||++++++.++.. ..++ ...||+|.+|+++|.++|++++..
T Consensus 35 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~aDi~l~~~~~~~~~~~~~~---~~~~p~l~~w~~~~~~~p~~~~~~ 110 (118)
T cd03177 35 PPEEKLDKLEEALDFLETFLEGSDYVAGDQLTIADLSLVATVSTLEALLPLD---LSKYPNVRAWLERLKALPPYEEAN 110 (118)
T ss_pred CCHHHHHHHHHHHHHHHHHHccCCeeCCCCcCHHHHHHHHHHHHHHHhcCCC---hhhCchHHHHHHHHHcccchHHHH
Confidence 34567788999999999999988999999999999999999988754 3333 467999999999999999999854
No 22
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=99.42 E-value=1.1e-12 Score=95.67 Aligned_cols=81 Identities=16% Similarity=0.230 Sum_probs=66.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhc-cCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhc--ChhH
Q 030158 3 CMKAEEGAVAALKRALDALNIHL-ASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVAN--QPKI 79 (182)
Q Consensus 3 nk~~~~~~~~~l~~~l~~Le~~L-~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~--~P~~ 79 (182)
++...+...+.+.+.+..||++| .+++|++|+++|+|||++++.+.++....+ .....||+|.+|+++|.+ +|++
T Consensus 39 ~~~~~~~~~~~~~~~l~~le~~l~~~~~~l~Gd~~t~ADi~l~~~~~~~~~~~~--~~~~~~p~l~~w~~~~~~~~~p~~ 116 (126)
T cd03183 39 SPEKVKKAEENLEESLDLLENYFLKDKPFLAGDEISIADLSAVCEIMQPEAAGY--DVFEGRPKLAAWRKRVKEAGNPLF 116 (126)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHhcCC--cccccCchHHHHHHHHHHhcchhH
Confidence 35566777889999999999985 447899999999999999998877654433 235789999999999999 9999
Q ss_pred Hhhhcc
Q 030158 80 KKFLGD 85 (182)
Q Consensus 80 k~~~~~ 85 (182)
++++..
T Consensus 117 ~~~~~~ 122 (126)
T cd03183 117 DEAHKI 122 (126)
T ss_pred HHHHHH
Confidence 987654
No 23
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.41 E-value=7.7e-13 Score=92.99 Aligned_cols=71 Identities=24% Similarity=0.374 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcChhH
Q 030158 6 AEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKI 79 (182)
Q Consensus 6 ~~~~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P~~ 79 (182)
..+.+..++...+..||++|.+++|++|+++|+|||++++++.+.....++ +..||+|.+|+++|.++|++
T Consensus 30 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~~~~~---~~~~p~l~~~~~~~~~~p~~ 100 (100)
T cd03206 30 DKETAIARAHRLLRLLEEHLAGRDWLAGDRPTIADVAVYPYVALAPEGGVD---LEDYPAIRRWLARIEALPGF 100 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCccCCCCCCHHHHHHHHHHHHHhccCCC---hhhCcHHHHHHHHHHhCcCC
Confidence 456678899999999999999999999999999999999988765433322 57899999999999999975
No 24
>PLN02473 glutathione S-transferase
Probab=99.41 E-value=1.1e-12 Score=103.85 Aligned_cols=81 Identities=22% Similarity=0.339 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcChhHHhhhc
Q 030158 5 KAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLG 84 (182)
Q Consensus 5 ~~~~~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P~~k~~~~ 84 (182)
...+.....+.+.++.||++|.+++||+|+++|+|||++++.+.++........+...||+|.+|+++|.++|++++++.
T Consensus 131 ~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p~~~~~~~ 210 (214)
T PLN02473 131 ALVEELKVKFDKVLDVYENRLATNRYLGGDEFTLADLTHMPGMRYIMNETSLSGLVTSRENLNRWWNEISARPAWKKLME 210 (214)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCcccCCCCCHHHHHHHHHHHHHHhccccHHHHhcCHHHHHHHHHHhcChhhHHHHH
Confidence 34555677899999999999998899999999999999999988764321112346789999999999999999999875
Q ss_pred c
Q 030158 85 D 85 (182)
Q Consensus 85 ~ 85 (182)
.
T Consensus 211 ~ 211 (214)
T PLN02473 211 L 211 (214)
T ss_pred H
Confidence 4
No 25
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=99.40 E-value=1.3e-12 Score=103.91 Aligned_cols=81 Identities=19% Similarity=0.188 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcChhHHhhhc
Q 030158 5 KAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLG 84 (182)
Q Consensus 5 ~~~~~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P~~k~~~~ 84 (182)
...+.....+.+.+..||.+|.+++||+|+++|+|||++++++..+....++ ...||+|.+|+++|.++|+|++++.
T Consensus 128 ~~~~~~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~l~~~~~~~~~~~~~---~~~~P~l~~w~~r~~~rp~~~~~~~ 204 (215)
T PRK13972 128 YAIERYQVETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWTRQRID---LAMYPAVKNWHERIRSRPATGQALL 204 (215)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccCccccCCCCCHHHHHHHHHHHHHhhcCCc---chhCHHHHHHHHHHHhCHHHHHHHH
Confidence 4456667789999999999999899999999999999998877544433333 5789999999999999999999876
Q ss_pred cccc
Q 030158 85 DFKQ 88 (182)
Q Consensus 85 ~~~~ 88 (182)
...+
T Consensus 205 ~~~~ 208 (215)
T PRK13972 205 KAQL 208 (215)
T ss_pred Hhcc
Confidence 5544
No 26
>PLN02395 glutathione S-transferase
Probab=99.40 E-value=1.1e-12 Score=103.85 Aligned_cols=82 Identities=23% Similarity=0.347 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcChhHHhhhc
Q 030158 5 KAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLG 84 (182)
Q Consensus 5 ~~~~~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P~~k~~~~ 84 (182)
...+.....+.+.++.||.+|.+++||+|+++|+|||++++++.++........++..||+|.+|+++|.++|++++++.
T Consensus 130 ~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~ADi~l~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~rp~~k~~~~ 209 (215)
T PLN02395 130 KVIKESEEKLAKVLDVYEARLSKSKYLAGDFVSLADLAHLPFTEYLVGPIGKAYLIKDRKHVSAWWDDISSRPAWKEVLA 209 (215)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccccCCCcCHHHHHHHHHHHHHhcccchhhhhccCchHHHHHHHHHcChHHHHHHH
Confidence 34566778899999999999998899999999999999999887653221112236789999999999999999999987
Q ss_pred cc
Q 030158 85 DF 86 (182)
Q Consensus 85 ~~ 86 (182)
..
T Consensus 210 ~~ 211 (215)
T PLN02395 210 KY 211 (215)
T ss_pred Hh
Confidence 65
No 27
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=99.39 E-value=1.1e-12 Score=96.10 Aligned_cols=80 Identities=20% Similarity=0.252 Sum_probs=64.4
Q ss_pred HHHHHHHHHHHHHHHHHhccC-CCeecCCCCCHHHHHHHHHHHHHHHh-h--cCchhhccChhHHHHHHHHhcChhHHhh
Q 030158 7 EEGAVAALKRALDALNIHLAS-NTYLVGHSVTLADIVMICNLYYGFKL-I--MTKSFTSEFPHVERYFWTVANQPKIKKF 82 (182)
Q Consensus 7 ~~~~~~~l~~~l~~Le~~L~~-~~fLvGe~lTlADi~l~~~l~~~~~~-~--~~~~~~~~~P~L~rW~~~v~~~P~~k~~ 82 (182)
.+.+...+...|..||.+|.+ ++||+|+++|+|||++++++.++... . .+......||+|.+|+++|.+||+|+.+
T Consensus 28 ~~~~~~~l~~~l~~Le~~L~~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~P~l~~w~~rl~~rps~~~t 107 (121)
T cd03201 28 NDGTEQALLDELEALEDHLKENGPFINGEKISAVDLSLAPKLYHLEIALGHYKNWSVPESLTSVKSYMKALFSRESFVKT 107 (121)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccCCCCCCHHhHHHHHHHHHHHHHHHHhcCCCCcccchHHHHHHHHHHCCchhhhc
Confidence 356678899999999999985 79999999999999999987766432 1 1111237899999999999999999998
Q ss_pred hccc
Q 030158 83 LGDF 86 (182)
Q Consensus 83 ~~~~ 86 (182)
+...
T Consensus 108 ~~~~ 111 (121)
T cd03201 108 KAEK 111 (121)
T ss_pred CCCH
Confidence 7643
No 28
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=99.38 E-value=1.1e-12 Score=95.89 Aligned_cols=81 Identities=20% Similarity=0.290 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHHHHHHHHhccC--CCeecCCCCCHHHHHHHHHHHHHHHhhcC---chhhccChhHHHHHHHHhcChhHH
Q 030158 6 AEEGAVAALKRALDALNIHLAS--NTYLVGHSVTLADIVMICNLYYGFKLIMT---KSFTSEFPHVERYFWTVANQPKIK 80 (182)
Q Consensus 6 ~~~~~~~~l~~~l~~Le~~L~~--~~fLvGe~lTlADi~l~~~l~~~~~~~~~---~~~~~~~P~L~rW~~~v~~~P~~k 80 (182)
..+.....+...|+.||++|.+ ++||+|+++|+|||++++++.++...... ......||+|.+|+++|.++|+++
T Consensus 29 ~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~r~~~~p~v~ 108 (124)
T cd03184 29 DREEKKAELRSALENLEEELTKRGTPFFGGDSPGMVDYMIWPWFERLEALKLLLGYEFPLDRFPKLKKWMDAMKEDPAVQ 108 (124)
T ss_pred cchhhHHHHHHHHHHHHHHHHhcCCCCcCCCCccHHHHHhhHHHHHHHHHHhhccccCCcccChHHHHHHHHhccChHHH
Confidence 3457788999999999999986 78999999999999999998876543211 112578999999999999999999
Q ss_pred hhhccc
Q 030158 81 KFLGDF 86 (182)
Q Consensus 81 ~~~~~~ 86 (182)
.++.+.
T Consensus 109 ~~~~~~ 114 (124)
T cd03184 109 AFYTDT 114 (124)
T ss_pred HHhCCH
Confidence 988764
No 29
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=99.37 E-value=4.7e-12 Score=94.52 Aligned_cols=76 Identities=28% Similarity=0.398 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHHhcc--CCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcChhHHhhhcccccc
Q 030158 12 AALKRALDALNIHLA--SNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLGDFKQA 89 (182)
Q Consensus 12 ~~l~~~l~~Le~~L~--~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P~~k~~~~~~~~~ 89 (182)
..+.+.|+.||.+|. ++.||+|+++|+|||++++++.++... .......||+|.+|+++|.++|++++++......
T Consensus 42 ~~~~~~l~~lE~~L~~~~~~~l~G~~~T~ADi~l~~~l~~~~~~--~~~~l~~~P~l~~~~~rv~~~P~vk~~~~~~~~~ 119 (137)
T cd03208 42 KAKNRYFPVFEKVLKSHGQDFLVGNKLSRADIHLLEAILMVEEL--DPSLLSDFPLLQAFKTRISNLPTIKKFLQPGSPR 119 (137)
T ss_pred HHHHHHHHHHHHHHHhCCCCeeeCCCCCHHHHHHHHHHHHHHHh--chhhhccChHHHHHHHHHHcCHHHHHHHhcCCCC
Confidence 456899999999998 678999999999999999999886443 2223578999999999999999999999875443
No 30
>PRK10542 glutathionine S-transferase; Provisional
Probab=99.37 E-value=2.7e-12 Score=100.61 Aligned_cols=75 Identities=20% Similarity=0.394 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcChhHHhhhcc
Q 030158 8 EGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLGD 85 (182)
Q Consensus 8 ~~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P~~k~~~~~ 85 (182)
......+.+.|..||.+|.+++||+|+++|+|||++++++.++....++ ...||+|.+|+++|.++|+|++++..
T Consensus 123 ~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~ADi~l~~~~~~~~~~~~~---~~~~p~l~~w~~~~~~~p~~k~~~~~ 197 (201)
T PRK10542 123 PTVRAQLEKKFQYVDEALADEQWICGQRFTIADAYLFTVLRWAYAVKLN---LEGLEHIAAYMQRVAERPAVAAALKA 197 (201)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeeeCCCCcHHhHHHHHHHHHhhccCCC---cccchHHHHHHHHHHcCHHHHHHHHH
Confidence 4567789999999999999899999999999999999998877544433 46899999999999999999998765
No 31
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=99.35 E-value=4.3e-12 Score=100.04 Aligned_cols=76 Identities=18% Similarity=0.301 Sum_probs=64.4
Q ss_pred HHHHHHHHHHHHHHHHhccCC--CeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcChhHHhhhcc
Q 030158 8 EGAVAALKRALDALNIHLASN--TYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLGD 85 (182)
Q Consensus 8 ~~~~~~l~~~l~~Le~~L~~~--~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P~~k~~~~~ 85 (182)
+.+.+.+.+.|+.||++|.++ .||+|+++|+|||++++++.++....++ ...||+|.+|+++|.++|+|+.++..
T Consensus 128 ~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~ADi~~~~~l~~~~~~~~~---~~~~p~l~~~~~~~~~rp~~~~~~~~ 204 (210)
T TIGR01262 128 RWYQHWISKGFAALEALLQPHAGAFCVGDTPTLADLCLVPQVYNAERFGVD---LTPYPTLRRIAAALAALPAFQRAHPE 204 (210)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCEeeCCCCCHHHHHHHHHHHHHHHcCCC---cccchHHHHHHHHHhcCHHHHHhCcc
Confidence 334567889999999999864 5999999999999999999887644333 47899999999999999999998865
Q ss_pred c
Q 030158 86 F 86 (182)
Q Consensus 86 ~ 86 (182)
.
T Consensus 205 ~ 205 (210)
T TIGR01262 205 N 205 (210)
T ss_pred c
Confidence 4
No 32
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=99.33 E-value=6.4e-12 Score=99.76 Aligned_cols=80 Identities=15% Similarity=0.135 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcChhHHhhhc
Q 030158 5 KAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLG 84 (182)
Q Consensus 5 ~~~~~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P~~k~~~~ 84 (182)
...+.....+...+..||++|.+++||+|+++|+|||++++.+.++...+++. ....||+|.+|+++|.++|+|++++.
T Consensus 123 ~~~~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~~~~~~~~~~~~-~~~~~p~l~~w~~~~~~rp~~~~~~~ 201 (211)
T PRK09481 123 SEADAARKQLREELLAIAPVFGEKPYFMSEEFSLVDCYLAPLLWRLPVLGIEL-SGPGAKELKGYMTRVFERDSFLASLT 201 (211)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCcccCCCccHHHHHHHHHHHHHHhcCCCC-CCCCChhHHHHHHHHhccHHHHHHcC
Confidence 44566777899999999999999999999999999999999987765443331 12579999999999999999998875
Q ss_pred c
Q 030158 85 D 85 (182)
Q Consensus 85 ~ 85 (182)
.
T Consensus 202 ~ 202 (211)
T PRK09481 202 E 202 (211)
T ss_pred H
Confidence 4
No 33
>PRK10357 putative glutathione S-transferase; Provisional
Probab=99.33 E-value=7.2e-12 Score=98.41 Aligned_cols=80 Identities=20% Similarity=0.216 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcChhHHhhhc
Q 030158 5 KAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLG 84 (182)
Q Consensus 5 ~~~~~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P~~k~~~~ 84 (182)
...+.....+...|..||++|.++. |+|+++|+|||++++.+.++.....+..+...||+|.+|+++|.++|+|+++.+
T Consensus 121 ~~~~~~~~~l~~~l~~le~~L~~~~-l~Gd~~t~ADi~l~~~l~~~~~~~~~~~~~~~~p~l~~~~~~i~~rp~~~~~~~ 199 (202)
T PRK10357 121 DELLRQREKINRSLDALEGYLVDGT-LKTDTVNLATIAIACAVGYLNFRRVAPGWCVDRPHLVKLVENLFQRESFARTEP 199 (202)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCc-ccCCCcCHHHHHHHHHHHHHHhcccCcchhhcChHHHHHHHHHhcChhhhhcCC
Confidence 3445677889999999999998878 999999999999999998775433333445789999999999999999998764
Q ss_pred c
Q 030158 85 D 85 (182)
Q Consensus 85 ~ 85 (182)
.
T Consensus 200 ~ 200 (202)
T PRK10357 200 P 200 (202)
T ss_pred C
Confidence 3
No 34
>PTZ00057 glutathione s-transferase; Provisional
Probab=99.30 E-value=7.3e-12 Score=99.06 Aligned_cols=78 Identities=21% Similarity=0.200 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHHHHHHhccCC--CeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcChhHHhhhcc
Q 030158 8 EGAVAALKRALDALNIHLASN--TYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLGD 85 (182)
Q Consensus 8 ~~~~~~l~~~l~~Le~~L~~~--~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P~~k~~~~~ 85 (182)
+.....+.+++..||++|.++ +||+|+++|+|||++++++.++... + +.....||+|.+|+++|.++|++++++.+
T Consensus 122 ~~~~~~~~~~l~~le~~L~~~~~~~l~Gd~~T~AD~~l~~~~~~~~~~-~-~~~l~~~P~l~~~~~r~~~~P~~k~y~~~ 199 (205)
T PTZ00057 122 TFLNEELPKWSGYFENILKKNHCNYFVGDNLTYADLAVFNLYDDIETK-Y-PNSLKNFPLLKAHNEFISNLPNIKNYISN 199 (205)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCeeeCCcccHHHHHHHHHHHHHHHh-C-hhhhccChhHHHHHHHHHhChHHHHHHHh
Confidence 445678899999999999764 7999999999999999988775422 2 22367899999999999999999999876
Q ss_pred cc
Q 030158 86 FK 87 (182)
Q Consensus 86 ~~ 87 (182)
..
T Consensus 200 ~~ 201 (205)
T PTZ00057 200 RK 201 (205)
T ss_pred CC
Confidence 54
No 35
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=99.29 E-value=1.2e-11 Score=90.12 Aligned_cols=73 Identities=16% Similarity=0.190 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHhcc---CCCeecCCCCCHHHHHHHHHHHHHHH---hhcCchhhccChhHHHHHHHHhcChhHHhhhcc
Q 030158 12 AALKRALDALNIHLA---SNTYLVGHSVTLADIVMICNLYYGFK---LIMTKSFTSEFPHVERYFWTVANQPKIKKFLGD 85 (182)
Q Consensus 12 ~~l~~~l~~Le~~L~---~~~fLvGe~lTlADi~l~~~l~~~~~---~~~~~~~~~~~P~L~rW~~~v~~~P~~k~~~~~ 85 (182)
..+...+..||+.|. +++|++| ++|+|||++++++.++.. ...+..+...||+|.+|+++|.++|+++.++..
T Consensus 33 ~~~~~~l~~Le~~L~~~~~~~fl~G-~~tlADi~l~~~~~~~~~~~~~~~~~~~~~~~P~l~~W~~~~~~rp~~~~~~~~ 111 (120)
T cd03203 33 AEAAAALDYIENALSKFDDGPFFLG-QFSLVDIAYVPFIERFQIFLSELFNYDITEGRPNLAAWIEEMNKIEAYTQTKQD 111 (120)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcCC-CccHHHHHHHHHHHHHHHHHHHhcCccccccCcHHHHHHHHHhcchHHHhHcCC
Confidence 456778889999997 4789999 999999999999876532 112223346899999999999999999998764
No 36
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.26 E-value=3.2e-11 Score=87.23 Aligned_cols=70 Identities=14% Similarity=0.195 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHHhc---cCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcChhHHhhhc
Q 030158 9 GAVAALKRALDALNIHL---ASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLG 84 (182)
Q Consensus 9 ~~~~~l~~~l~~Le~~L---~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P~~k~~~~ 84 (182)
.....+.+.+..||..| .+++||+|+ +|+|||++++++.++....++ ..|+|.+|+++|.++|+|++++.
T Consensus 41 ~~~~~~~~~~~~le~~l~~~~~~~yl~Gd-~T~ADi~l~~~~~~~~~~~~~-----~~P~l~~~~~rv~~rPsv~~~~~ 113 (114)
T cd03194 41 AVQADIARIEAIWAECLARFQGGPFLFGD-FSIADAFFAPVVTRFRTYGLP-----LSPAAQAYVDALLAHPAMQEWIA 113 (114)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCC-CcHHHHHHHHHHHHHHHcCCC-----CCHHHHHHHHHHHCCHHHHHHHh
Confidence 34445555555665555 467899999 999999999999887544332 23999999999999999999864
No 37
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.26 E-value=1.7e-11 Score=86.13 Aligned_cols=69 Identities=20% Similarity=0.256 Sum_probs=59.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHh
Q 030158 3 CMKAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVA 74 (182)
Q Consensus 3 nk~~~~~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~ 74 (182)
++...+....++...++.||.+|.+++|++|+.+|+|||++++++.++....++ ...||+|.+|+++|.
T Consensus 37 ~~~~~~~~~~~~~~~l~~le~~L~~~~~l~g~~~slaDi~~~~~~~~~~~~~~~---~~~~p~l~~~~~~~~ 105 (105)
T cd03179 37 DAEVLAFLRERGHAALAVLEAHLAGRDFLVGDALTIADIALAAYTHVADEGGFD---LADYPAIRAWLARIE 105 (105)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHccCccccCCCCCHHHHHHHHHHHhccccCCC---hHhCccHHHHHHhhC
Confidence 356678889999999999999998889999999999999999999887544433 567999999999873
No 38
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.25 E-value=3.3e-11 Score=87.06 Aligned_cols=72 Identities=18% Similarity=0.161 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHHHHHHhcc-CCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcChhHHhhhc
Q 030158 7 EEGAVAALKRALDALNIHLA-SNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLG 84 (182)
Q Consensus 7 ~~~~~~~l~~~l~~Le~~L~-~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P~~k~~~~ 84 (182)
.+.+...+.+.+..||.+|. +++||+| .+|+||+++++++.|+...+++ .. |+|.+|++||.+||+|++++.
T Consensus 40 ~~~~~~~~~~~~~~le~~l~~~~~~l~G-~fSiAD~~l~~~~~~~~~~g~~---l~--p~l~ay~~r~~~rPa~~~~~~ 112 (114)
T cd03195 40 SEAAQAAAEKLIAVAEALLPPGAANLFG-EWCIADTDLALMLNRLVLNGDP---VP--ERLRDYARRQWQRPSVQAWLA 112 (114)
T ss_pred CHHHHHHHHHHHHHHHHHHhcCCCcccC-CccHHHHHHHHHHHHHHHcCCC---CC--HHHHHHHHHHHCCHHHHHHHh
Confidence 35678888999999999996 4489999 5999999999999998777665 33 999999999999999999874
No 39
>PRK11752 putative S-transferase; Provisional
Probab=99.23 E-value=4.7e-11 Score=98.33 Aligned_cols=80 Identities=24% Similarity=0.194 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhh-cC---chhhccChhHHHHHHHHhcChhHHhh
Q 030158 7 EEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLI-MT---KSFTSEFPHVERYFWTVANQPKIKKF 82 (182)
Q Consensus 7 ~~~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~-~~---~~~~~~~P~L~rW~~~v~~~P~~k~~ 82 (182)
++.....+.+.|+.||++|.+++||+|+++|+|||++++++.++.... ++ ...+..||+|.+|+++|.++|+|+++
T Consensus 176 ~~~~~~~~~~~L~~le~~L~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~~P~L~~w~~rv~~rPs~k~~ 255 (264)
T PRK11752 176 INRFTMEAKRQLDVLDKQLAEHEYIAGDEYTIADIAIWPWYGNLVLGNLYDAAEFLDVGSYKHVQRWAKEIAERPAVKRG 255 (264)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCCCccCHHHHHHHHHHHHHhhccccccccccCcccCHHHHHHHHHHHhCHHHHHH
Confidence 455566788999999999998899999999999999999887653311 11 01156899999999999999999998
Q ss_pred hccc
Q 030158 83 LGDF 86 (182)
Q Consensus 83 ~~~~ 86 (182)
+...
T Consensus 256 ~~~~ 259 (264)
T PRK11752 256 RIVN 259 (264)
T ss_pred Hhcc
Confidence 7654
No 40
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=99.21 E-value=5.3e-11 Score=82.04 Aligned_cols=70 Identities=30% Similarity=0.288 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHH
Q 030158 4 MKAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTV 73 (182)
Q Consensus 4 k~~~~~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v 73 (182)
+...+.....+.+.++.||++|.++.|++|+++|+|||++++++.++........+...+|+|.+|+++|
T Consensus 31 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~t~aDi~~~~~l~~~~~~~~~~~~~~~~p~l~~~~~~~ 100 (100)
T cd00299 31 EAALEEAREELAAALAALEKLLAGRPYLAGDRFSLADIALAPVLARLDLLGPLLGLLDEYPRLAAWYDRL 100 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCcCHHHHHHHHHHHHHHHhhhhhhhhccCccHHHHHHhC
Confidence 5667788899999999999999999999999999999999999998866543222357899999999875
No 41
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=99.21 E-value=8.2e-11 Score=80.76 Aligned_cols=69 Identities=17% Similarity=0.223 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCc----hhhccChhHHHHHHHHh
Q 030158 6 AEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTK----SFTSEFPHVERYFWTVA 74 (182)
Q Consensus 6 ~~~~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~----~~~~~~P~L~rW~~~v~ 74 (182)
.......++.+.++.||++|.+++|++|+++|+|||++++.+.++....++. .....||+|.+|+++|.
T Consensus 16 ~~~~~~~~~~~~l~~le~~L~~~~yl~Gd~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~r~~ 88 (88)
T cd03193 16 LTREIYSLAKKDLKALSDLLGDKKFFFGDKPTSLDATVFGHLASILYAPLPNSALQLILKEYPNLVEYCERIR 88 (88)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCccCCCCCCHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHHhC
Confidence 3446678899999999999999999999999999999999998875432221 12467999999999873
No 42
>PLN02378 glutathione S-transferase DHAR1
Probab=99.19 E-value=3.7e-11 Score=95.66 Aligned_cols=81 Identities=27% Similarity=0.354 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHHHHHhcc--CCCeecCCCCCHHHHHHHHHHHHHHHh---hcCchhhccChhHHHHHHHHhcChhHHhhh
Q 030158 9 GAVAALKRALDALNIHLA--SNTYLVGHSVTLADIVMICNLYYGFKL---IMTKSFTSEFPHVERYFWTVANQPKIKKFL 83 (182)
Q Consensus 9 ~~~~~l~~~l~~Le~~L~--~~~fLvGe~lTlADi~l~~~l~~~~~~---~~~~~~~~~~P~L~rW~~~v~~~P~~k~~~ 83 (182)
.....+.+.|..||++|. +++||+|+++|+|||++++++.++... .........||+|.+|+++|.++|+++.++
T Consensus 118 ~~~~~~~~~l~~le~~L~~~~~~fl~Gd~~T~ADi~l~~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~rpa~~~~~ 197 (213)
T PLN02378 118 GSEHALLVELEALENHLKSHDGPFIAGERVSAVDLSLAPKLYHLQVALGHFKSWSVPESFPHVHNYMKTLFSLDSFEKTK 197 (213)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCcCCCCCchhhHHHHHHHHHHHHHHHHhcCCCchhHhHHHHHHHHHHhcCCCeeccc
Confidence 445677888999999998 468999999999999999998775321 111122468999999999999999999887
Q ss_pred cccccc
Q 030158 84 GDFKQA 89 (182)
Q Consensus 84 ~~~~~~ 89 (182)
.....+
T Consensus 198 ~~~~~~ 203 (213)
T PLN02378 198 TEEKYV 203 (213)
T ss_pred CChHHH
Confidence 665433
No 43
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=99.16 E-value=1.8e-10 Score=93.54 Aligned_cols=81 Identities=23% Similarity=0.240 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHHHHHHhcc------------------CCCeecCCCCCHHHHHHHHHHHHHHHh---hcCchhhccChhH
Q 030158 8 EGAVAALKRALDALNIHLA------------------SNTYLVGHSVTLADIVMICNLYYGFKL---IMTKSFTSEFPHV 66 (182)
Q Consensus 8 ~~~~~~l~~~l~~Le~~L~------------------~~~fLvGe~lTlADi~l~~~l~~~~~~---~~~~~~~~~~P~L 66 (182)
+.....+.+.++.||++|. ++.||+|+++|+|||++++++.++... ..+......||+|
T Consensus 122 ~~~~~~l~~~l~~Le~~L~~~~~~~~~~~~~~~~~~~~~~f~~Gd~~tlaD~~l~p~l~~l~~~~~~~~~~~i~~~~p~l 201 (236)
T TIGR00862 122 DNLEKGLLKALKKLDDYLNSPLPEEIDEDSAEDEKVSRRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFDIPAEFTGV 201 (236)
T ss_pred HHHHHHHHHHHHHHHHHHhccccccccccccccccccCCCcccCCccchhhHHHHHHHHHHHHHHHHHhCcCccccCchH
Confidence 4445668899999999997 478999999999999999999887642 2232336889999
Q ss_pred HHHHHHHhcChhHHhhhccccc
Q 030158 67 ERYFWTVANQPKIKKFLGDFKQ 88 (182)
Q Consensus 67 ~rW~~~v~~~P~~k~~~~~~~~ 88 (182)
.+|+++|.++++|+.++.....
T Consensus 202 ~~w~~~~~~~~sf~~t~p~~~~ 223 (236)
T TIGR00862 202 WRYLSNAYAREEFTNTCPDDKE 223 (236)
T ss_pred HHHHHHHhccchHHhhCCChHH
Confidence 9999999999999998765443
No 44
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=99.15 E-value=1.6e-10 Score=81.09 Aligned_cols=66 Identities=29% Similarity=0.424 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCC--eecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhc
Q 030158 6 AEEGAVAALKRALDALNIHLASNT--YLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVAN 75 (182)
Q Consensus 6 ~~~~~~~~l~~~l~~Le~~L~~~~--fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~ 75 (182)
..+.....+...+..||++|..++ ||+|+++|+|||++++.|..+.. . .+...||||.+|++||.+
T Consensus 32 ~~~~~~~~~~~~l~~l~~~L~~~~~~~l~G~~~T~AD~~v~~~l~~~~~---~-~~~~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 32 SGDFSREELPKALKILEKHLAERGGDFLVGDKPTLADIAVFGFLASLRW---A-DFPKDYPNLVRWYERIEE 99 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSSSSSSSSS--HHHHHHHHHHHHHHC---C-HHTTTCHHHHHHHHHHHT
T ss_pred hHHhhHHHHHHHHHHHHHHHHcCCCeeecCCCCCHHHHHHHHHHHHHhh---c-ccccccHHHHHHHHhhcC
Confidence 446678899999999999999987 99999999999999998864431 1 112589999999999974
No 45
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=99.15 E-value=1.4e-10 Score=81.48 Aligned_cols=59 Identities=31% Similarity=0.423 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcC
Q 030158 12 AALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQ 76 (182)
Q Consensus 12 ~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~ 76 (182)
.++...+..||++|..++||+|+++|+|||++++.+.+. ... ...||+|.+|+++|.++
T Consensus 38 ~~~~~~l~~le~~L~~~~fl~Gd~~tiADi~l~~~l~~~---~~~---~~~~p~l~~w~~r~~~~ 96 (96)
T cd03200 38 KEKAAVLRALNSALGRSPWLVGSEFTVADIVSWCALLQT---GLA---SAAPANVQRWLKSCENL 96 (96)
T ss_pred HHHHHHHHHHHHHHcCCCccCCCCCCHHHHHHHHHHHHc---ccc---cccChHHHHHHHHHHhC
Confidence 466788999999999999999999999999999988643 222 35799999999999864
No 46
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.14 E-value=2e-10 Score=90.91 Aligned_cols=74 Identities=27% Similarity=0.370 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcChhHH
Q 030158 4 MKAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIK 80 (182)
Q Consensus 4 k~~~~~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P~~k 80 (182)
......+...+...+..||.+|..++||+|+++|+|||++++.+.++.....+ ...||+|.+|+++|.++|+++
T Consensus 126 ~~~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~tiAD~~~~~~~~~~~~~~~~---~~~~p~l~~w~~r~~~rp~~~ 199 (211)
T COG0625 126 EAALEAARAEIRALLALLEALLADGPYLAGDRFTIADIALAPLLWRLALLGEE---LADYPALKAWYERVLARPAFR 199 (211)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCcccCCCCCHHHHHHHHHHHHhhhcCcc---cccChHHHHHHHHHHcCCchh
Confidence 45667888999999999999999999999999999999999999986544433 378999999999999999964
No 47
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.13 E-value=2.4e-10 Score=80.04 Aligned_cols=67 Identities=25% Similarity=0.289 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHH
Q 030158 4 MKAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTV 73 (182)
Q Consensus 4 k~~~~~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v 73 (182)
+..++.....+.+.|..||++|.+++| +++|+|||++++.+.++.....+..+...||+|.+|+++|
T Consensus 32 ~~~~~~~~~~~~~~l~~le~~L~~~~~---d~~TlADi~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~rm 98 (98)
T cd03205 32 QPWLERQRGKIERALDALEAELAKLPL---DPLDLADIAVACALGYLDFRHPDLDWRAAHPALAAWYARF 98 (98)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhCCC---CCCCHHHHHHHHHHHHHHhHccCcchhhhChHHHHHHHhC
Confidence 456778889999999999999998888 8999999999999998864433444467899999999885
No 48
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=99.13 E-value=1.3e-10 Score=81.78 Aligned_cols=68 Identities=28% Similarity=0.336 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccC--CCeecCCCCCHHHHHHHHHHHHHHHhhcCchh-hccChhHHHHHHHH
Q 030158 4 MKAEEGAVAALKRALDALNIHLAS--NTYLVGHSVTLADIVMICNLYYGFKLIMTKSF-TSEFPHVERYFWTV 73 (182)
Q Consensus 4 k~~~~~~~~~l~~~l~~Le~~L~~--~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~-~~~~P~L~rW~~~v 73 (182)
+.........+.+.+..||.+|.+ ++|++|+++|+|||++++++.++... +... ...||+|.+|+++|
T Consensus 34 ~~~~~~~~~~~~~~l~~le~~l~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~--~~~~~~~~~p~l~~~~~~~ 104 (104)
T cd03192 34 EKKKEFLKEAIPKYLKKLEKILKENGGGYLVGDKLTWADLVVFDVLDYLLYL--DPKLLLKKYPKLKALRERV 104 (104)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHcCCCeeeCCCccHHHHHHHHHHHHHHhh--CchhhHHhChhHHHHHHhC
Confidence 566677888999999999999987 89999999999999999999887543 2233 67899999999875
No 49
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.12 E-value=2.5e-10 Score=83.70 Aligned_cols=69 Identities=20% Similarity=0.272 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcC
Q 030158 7 EEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQ 76 (182)
Q Consensus 7 ~~~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~ 76 (182)
.+.....+...|+.||++|.+++||+|+++|+|||+++..+.++... .+......||+|.+|+++|.+.
T Consensus 56 ~~~~~~~~~~~l~~l~~~L~~~~fl~Gd~~t~AD~~l~~~l~~~~~~-~~~~~~~~~p~l~~W~~r~~~~ 124 (124)
T cd03202 56 REAALANFRAALEPLRATLKGQPFLGGAAPNYADYIVFGGFQWARIV-SPFPLLEEDDPVYDWFERCLDL 124 (124)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCccCCCCCchhHHHHHHHHHHHHHc-CcccccccCChHHHHHHHHhcC
Confidence 35677889999999999999999999999999999999999887543 1222346899999999999763
No 50
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.06 E-value=6.6e-10 Score=89.62 Aligned_cols=83 Identities=25% Similarity=0.352 Sum_probs=70.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcChhHHh
Q 030158 2 FCMKAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKK 81 (182)
Q Consensus 2 ~nk~~~~~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P~~k~ 81 (182)
++..........+..+++.+|.+|.++.|++|+++|+|||.+++.+..+.....+......||++.||++++..+|++++
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~e~~l~~~~yl~g~~~tlADl~~~~~~~~~~~~~~~~~~~~~~p~v~~W~~~~~~~P~~~e 205 (226)
T KOG0867|consen 126 LNPTAVKELEAKLRKALDNLERFLKTQVYLAGDQLTLADLSLASTLSQFQGKFATEKDFEKYPKVARWYERIQKRPAYEE 205 (226)
T ss_pred CcchhhHHHHHHHHHHHHHHHHHHccCCcccCCcccHHHHHHhhHHHHHhHhhhhhhhhhhChHHHHHHHHHHhCccHHH
Confidence 35667788899999999999999999999999999999999999999874222234557899999999999999999877
Q ss_pred hhc
Q 030158 82 FLG 84 (182)
Q Consensus 82 ~~~ 84 (182)
...
T Consensus 206 ~~~ 208 (226)
T KOG0867|consen 206 ANE 208 (226)
T ss_pred HHH
Confidence 554
No 51
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=99.04 E-value=9e-10 Score=90.92 Aligned_cols=77 Identities=17% Similarity=0.164 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHhccC-CCeecCCCCCHHHHHHHHHHHHHHHh---hcCchhhccChhHHHHHHHHhcChhHHhhhcc
Q 030158 10 AVAALKRALDALNIHLAS-NTYLVGHSVTLADIVMICNLYYGFKL---IMTKSFTSEFPHVERYFWTVANQPKIKKFLGD 85 (182)
Q Consensus 10 ~~~~l~~~l~~Le~~L~~-~~fLvGe~lTlADi~l~~~l~~~~~~---~~~~~~~~~~P~L~rW~~~v~~~P~~k~~~~~ 85 (182)
..+.+...|..||++|.+ +.||+|+++|+|||++++.+.++... ..+-.....||+|.+|+++|.++|+|+.++..
T Consensus 172 ~~~~l~~~l~~LE~~L~~~g~yl~Gd~~SlADi~l~p~L~~l~~~~~~~~~~~i~~~~P~L~~w~~ri~~rps~~~~~~~ 251 (265)
T PLN02817 172 TEQALLDELTSFDDYIKENGPFINGEKISAADLSLGPKLYHLEIALGHYKNWSVPDSLPFVKSYMKNIFSMESFVKTRAL 251 (265)
T ss_pred HHHHHHHHHHHHHHHHhcCCCeeCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHhcchhHhhcCCC
Confidence 345678889999999985 68999999999999999998765322 11111246899999999999999999998764
Q ss_pred c
Q 030158 86 F 86 (182)
Q Consensus 86 ~ 86 (182)
.
T Consensus 252 ~ 252 (265)
T PLN02817 252 P 252 (265)
T ss_pred H
Confidence 3
No 52
>PRK15113 glutathione S-transferase; Provisional
Probab=99.04 E-value=7e-10 Score=88.22 Aligned_cols=75 Identities=16% Similarity=0.060 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHHHHHHHHhccC-CCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcChhHHhhhc
Q 030158 6 AEEGAVAALKRALDALNIHLAS-NTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLG 84 (182)
Q Consensus 6 ~~~~~~~~l~~~l~~Le~~L~~-~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P~~k~~~~ 84 (182)
..+...+.+.+.+..||++|.+ ..||+|+ +|+|||++++++.++...+.+ . .|+|.+|+++|.++|+|++++.
T Consensus 134 ~~~~~~~~~~~~l~~le~~L~~~~~~l~G~-~TlADi~l~~~l~~~~~~~~~---~--~p~l~~~~~r~~~rp~~~~~~~ 207 (214)
T PRK15113 134 LSEAGKAAAEKLFAVAERLLAPGQPNLFGE-WCIADTDLALMLNRLVLHGDE---V--PERLADYATFQWQRASVQRWLA 207 (214)
T ss_pred ccHHHHHHHHHHHHHHHHHHhcCCCEeeCC-ccHHHHHHHHHHHHHHHcCCC---C--CHHHHHHHHHHhcCHHHHHHHH
Confidence 3456778899999999999975 4699996 999999999999876544332 2 2999999999999999999886
Q ss_pred cc
Q 030158 85 DF 86 (182)
Q Consensus 85 ~~ 86 (182)
..
T Consensus 208 ~~ 209 (214)
T PRK15113 208 LS 209 (214)
T ss_pred Hh
Confidence 54
No 53
>KOG4420 consensus Uncharacterized conserved protein (Ganglioside-induced differentiation associated protein 1, GDAP1) [Function unknown]
Probab=99.01 E-value=1.2e-09 Score=88.60 Aligned_cols=82 Identities=26% Similarity=0.335 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhccC----CCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhc--cChhHHHHHHHHhcChh
Q 030158 5 KAEEGAVAALKRALDALNIHLAS----NTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTS--EFPHVERYFWTVANQPK 78 (182)
Q Consensus 5 ~~~~~~~~~l~~~l~~Le~~L~~----~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~--~~P~L~rW~~~v~~~P~ 78 (182)
....+....+...|+.+|..|.. .+||+|+.+|+|||++..+++++...++...+.. ..|||..|+.++..|++
T Consensus 201 s~lkkild~l~~~Ld~VEteLe~r~~~~~wL~G~efslADVsLg~~LhRL~~Lg~e~~yw~~gsrpnle~Yf~rvrrR~s 280 (325)
T KOG4420|consen 201 SYLKKILDELAMVLDQVETELEKRKLCELWLCGCEFSLADVSLGATLHRLKFLGLEKKYWEDGSRPNLESYFERVRRRFS 280 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccceeeccccchHHHHHHHHHHHHHHHcccHHHhcccCCCccHHHHHHHHHhhhH
Confidence 45567788899999999999987 5799999999999999999999988877665544 78999999999999999
Q ss_pred HHhhhccc
Q 030158 79 IKKFLGDF 86 (182)
Q Consensus 79 ~k~~~~~~ 86 (182)
|.+++++.
T Consensus 281 f~kvlg~~ 288 (325)
T KOG4420|consen 281 FRKVLGDI 288 (325)
T ss_pred HHHhhhhH
Confidence 99999875
No 54
>PRK10387 glutaredoxin 2; Provisional
Probab=98.99 E-value=6.8e-10 Score=87.47 Aligned_cols=68 Identities=16% Similarity=0.149 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcChhHH
Q 030158 8 EGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIK 80 (182)
Q Consensus 8 ~~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P~~k 80 (182)
......+.+.|+.||.+|.+ +||+|+++|+|||++++++.++.... + ...+|+|.+|++||.++|++.
T Consensus 141 ~~~~~~~~~~l~~le~~L~~-~~l~G~~~s~ADi~l~~~l~~~~~~~-~---~~~~p~l~~w~~r~~~r~~~~ 208 (210)
T PRK10387 141 PGLIKEINADLRALDPLIVK-PNAVNGELSTDDIHLFPILRNLTLVK-G---IEWPPRVADYRDNMSKKTQVP 208 (210)
T ss_pred HHHHHHHHHHHHHHHHHhcC-ccccCCCCCHHHHHHHHHHhcceeec-C---CCCCHHHHHHHHHHHHHhCCC
Confidence 34567899999999999986 99999999999999999998875431 2 224799999999999998763
No 55
>PLN02907 glutamate-tRNA ligase
Probab=98.94 E-value=2e-09 Score=99.60 Aligned_cols=66 Identities=24% Similarity=0.313 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcChh
Q 030158 13 ALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPK 78 (182)
Q Consensus 13 ~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P~ 78 (182)
.+...++.||.+|..++||+|+++|+|||++++.+..+............||+|.||+++|.++|+
T Consensus 94 ~l~~~L~~LE~~L~~rtYLvGd~lTLADIaL~~~L~~~~~~~~~~~~~~~yPnL~RW~erI~arPs 159 (722)
T PLN02907 94 EFENACEYVDGYLASRTFLVGYSLTIADIAIWSGLAGSGQRWESLRKSKKYQNLVRWFNSISAEYS 159 (722)
T ss_pred HHHHHHHHHHHHhccCCeecCCCCCHHHHHHHHHHHhhhhhhhcccccccCHHHHHHHHHHHhCCC
Confidence 567789999999999999999999999999999886542221122235789999999999999999
No 56
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=98.86 E-value=1.1e-08 Score=76.45 Aligned_cols=70 Identities=17% Similarity=0.236 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCc----hhhccChhHHHHHHHHhc
Q 030158 6 AEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTK----SFTSEFPHVERYFWTVAN 75 (182)
Q Consensus 6 ~~~~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~----~~~~~~P~L~rW~~~v~~ 75 (182)
..+.........++.|+..|++++||+|+++|++|+++++++..+....++. .....||||.+|++||.+
T Consensus 61 ~~~~~~~~a~~~l~~l~~~L~~~~~~~Gd~~t~~D~~~~~~l~~~~~~~~~~~~l~~~~~~~pnL~~~~~ri~~ 134 (137)
T cd03212 61 VEAEIYRDAKECLNLLSQRLGESQFFFGDTPTSLDALVFGYLAPLLKAPLPNNKLQNHLKQCPNLCRFCDRILS 134 (137)
T ss_pred hHHHHHHHHHHHHHHHHHHHCCCCcCCCCCCcHHHHHHHHHHHHHHhccCCChHHHHHHHHCcHHHHHHHHHHH
Confidence 4566777888899999999999999999999999999999988776433331 235689999999999975
No 57
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=98.78 E-value=1.6e-08 Score=74.43 Aligned_cols=67 Identities=12% Similarity=0.267 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhc-C---chhhccChhHHHHHHHH
Q 030158 7 EEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIM-T---KSFTSEFPHVERYFWTV 73 (182)
Q Consensus 7 ~~~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~-~---~~~~~~~P~L~rW~~~v 73 (182)
.+.....+...|+.|+..|++++||+|+++|.+|+++++.+.++..... + ......||||.+|++||
T Consensus 55 ~ee~~~~~~~~l~aLs~~Lg~~~~l~Gd~pT~~Da~vf~~la~~~~~~~~~~~l~~~~~~~pnL~~y~~Ri 125 (126)
T cd03211 55 LDQVIEEVDQCCQALSQRLGTQPYFFGDQPTELDALVFGHLFTILTTQLPNDELAEKVKKYSNLLAFCRRI 125 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCcHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHhc
Confidence 3566777889999999999999999999999999999999887754311 1 12356899999999997
No 58
>KOG1695 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.78 E-value=3.3e-08 Score=78.66 Aligned_cols=78 Identities=27% Similarity=0.347 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHHHhccC--CCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcChhHHhhhcccc
Q 030158 10 AVAALKRALDALNIHLAS--NTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLGDFK 87 (182)
Q Consensus 10 ~~~~l~~~l~~Le~~L~~--~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P~~k~~~~~~~ 87 (182)
........+..+++.|.. +.||||+++|+||++++..+..+... +++.....||+|.++..+|.++|.++.++..+.
T Consensus 124 ~~Pa~~~~~~~~~~~L~~~~sgflvGd~lT~aDl~i~e~l~~l~~~-~~~~~~~~~P~L~a~~~kv~~~p~ik~~i~~r~ 202 (206)
T KOG1695|consen 124 YLPAKPKYFKILEKILKKNKSGFLVGDKLTWADLVIAEHLDTLEEL-LDPSALDHFPKLKAFKERVSSIPNIKKYLESRP 202 (206)
T ss_pred hccchHHHHHHHHHHHHhCCCCeeecCcccHHHHHHHHHHHHHHHh-cCchhhccChHHHHHHHHHhcCchHHHHHhcCC
Confidence 445677889999999984 57999999999999999999987654 566667789999999999999999999998765
Q ss_pred c
Q 030158 88 Q 88 (182)
Q Consensus 88 ~ 88 (182)
.
T Consensus 203 ~ 203 (206)
T KOG1695|consen 203 V 203 (206)
T ss_pred C
Confidence 4
No 59
>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.74 E-value=4.6e-08 Score=78.78 Aligned_cols=82 Identities=18% Similarity=0.287 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc-CCCeecCCCCCHHHHHHHHHHHHHHHhhc-----CchhhccChhHHHHHHHHhcChh
Q 030158 5 KAEEGAVAALKRALDALNIHLA-SNTYLVGHSVTLADIVMICNLYYGFKLIM-----TKSFTSEFPHVERYFWTVANQPK 78 (182)
Q Consensus 5 ~~~~~~~~~l~~~l~~Le~~L~-~~~fLvGe~lTlADi~l~~~l~~~~~~~~-----~~~~~~~~P~L~rW~~~v~~~P~ 78 (182)
+..+.+..++...|..||+.|. +.+|+.|+++++.||++++++.++..... .......+|.|.+|+++|.++++
T Consensus 125 e~~~~~~~e~~e~l~~lE~el~k~k~~fgG~~~G~vDi~~~p~~~~~~~~~~~~~~~~~~~~~~~P~L~~W~~~~~~~~~ 204 (231)
T KOG0406|consen 125 EEQEAAKEELREALKVLEEELGKGKDFFGGETIGFVDIAIGPSFERWLAVLEKFGGVKFIIEEETPKLIKWIKRMKEDEA 204 (231)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcCHhhhhHHhhHHHHHHHHHHhcCcccCCCCCCccHHHHHHHHhcChh
Confidence 4456677889999999999999 78999999999999999977777654321 11225689999999999999999
Q ss_pred HHhhhccc
Q 030158 79 IKKFLGDF 86 (182)
Q Consensus 79 ~k~~~~~~ 86 (182)
|+.++.+.
T Consensus 205 V~~~~p~~ 212 (231)
T KOG0406|consen 205 VKAVLPDS 212 (231)
T ss_pred HHhhcCCH
Confidence 99988764
No 60
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=98.71 E-value=1.7e-08 Score=80.15 Aligned_cols=66 Identities=17% Similarity=0.279 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccCh-hHHHHHHHHhcChhH
Q 030158 8 EGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFP-HVERYFWTVANQPKI 79 (182)
Q Consensus 8 ~~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P-~L~rW~~~v~~~P~~ 79 (182)
+.....+...|+.||++|.+++|++| .+|+|||++++++.++.... + ..+| +|.+|++||.+++.+
T Consensus 140 ~~~~~~~~~~l~~le~~L~~~~~l~g-~~TiADi~l~~~l~~~~~~~-~----~~~p~~l~~w~~Ri~ar~~~ 206 (209)
T TIGR02182 140 PGLLEEINADLEELDKLIDGPNAVNG-ELSEDDILVFPLLRNLTLVA-G----INWPSRVADYLDNMSKKSKV 206 (209)
T ss_pred HHHHHHHHHHHHHHHHHHhCccccCC-CCCHHHHHHHHHhcCeeeec-C----CCCChHHHHHHHHHHHHhCC
Confidence 35567889999999999999999965 69999999999998764321 1 1356 999999999998865
No 61
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=98.68 E-value=6.6e-08 Score=73.09 Aligned_cols=64 Identities=16% Similarity=0.079 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHHhc-cCCCeecCCCCCHHHHHHHHHHHHHHHh-hcCchhhccChhHHHHHHHHhc
Q 030158 10 AVAALKRALDALNIHL-ASNTYLVGHSVTLADIVMICNLYYGFKL-IMTKSFTSEFPHVERYFWTVAN 75 (182)
Q Consensus 10 ~~~~l~~~l~~Le~~L-~~~~fLvGe~lTlADi~l~~~l~~~~~~-~~~~~~~~~~P~L~rW~~~v~~ 75 (182)
.++.|...+...-+.+ .++.|++|+++|||||++++++..+... .+ ..+..||+|.+|+++|.+
T Consensus 80 ~r~~L~~a~~~w~~~~~~~~~FlaGd~ptIADisvyg~l~s~e~~~~~--~Dl~~~p~I~~W~eRm~~ 145 (149)
T cd03197 80 VREWLYDALNTWVAALGKDRQFHGGSKPNLADLAVYGVLRSVEGHPAF--KDMVEETKIGEWYERMDA 145 (149)
T ss_pred HHHHHHHHHHHHHHHhcCCCCccCCCCCCHHHHHHHHHHHHHHHhccc--cchhhCcCHHHHHHHHHH
Confidence 3455555554443444 4568999999999999999999876544 33 126689999999999975
No 62
>KOG0868 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.63 E-value=6.1e-08 Score=74.85 Aligned_cols=77 Identities=23% Similarity=0.344 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHHHHHHhccC--CCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcChhHHhhhc
Q 030158 7 EEGAVAALKRALDALNIHLAS--NTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLG 84 (182)
Q Consensus 7 ~~~~~~~l~~~l~~Le~~L~~--~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P~~k~~~~ 84 (182)
...+..-+.+++..||..|.. +.|-|||.+|+|||++.+.+..+..+.+| +..||.|.|..+++.+.|+|+.+..
T Consensus 130 ~~W~q~~ItkGF~ALEklL~~~aGkycvGDevtiADl~L~pqv~nA~rf~vd---l~PYPti~ri~e~l~elpaFq~ahP 206 (217)
T KOG0868|consen 130 DQWAQHFITKGFTALEKLLKSHAGKYCVGDEVTIADLCLPPQVYNANRFHVD---LTPYPTITRINEELAELPAFQAAHP 206 (217)
T ss_pred hHHHHHHHHHhHHHHHHHHHHccCCcccCceeehhhhccchhhhhhhhcccc---CCcCchHHHHHHHHHhCHHHHhcCC
Confidence 456777889999999999986 57999999999999999999988777677 7899999999999999999998876
Q ss_pred cc
Q 030158 85 DF 86 (182)
Q Consensus 85 ~~ 86 (182)
+.
T Consensus 207 ~n 208 (217)
T KOG0868|consen 207 DN 208 (217)
T ss_pred CC
Confidence 54
No 63
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.58 E-value=4.7e-08 Score=80.08 Aligned_cols=81 Identities=26% Similarity=0.301 Sum_probs=67.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHh---hc--CchhhccChhHHHHHHHHhcCh
Q 030158 3 CMKAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKL---IM--TKSFTSEFPHVERYFWTVANQP 77 (182)
Q Consensus 3 nk~~~~~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~---~~--~~~~~~~~P~L~rW~~~v~~~P 77 (182)
++++.+++...+-..|+.||+.|+++.||+|+++|-|||-|+++|.+.-.. .+ +..-...||||..|+..+.+.|
T Consensus 199 tq~aYeea~~~lF~~Ld~lE~~L~~~ryl~Gd~lTEAD~RLftTlvRFD~VYvgHFKCN~~rI~dypnL~~yLr~LYq~p 278 (324)
T COG0435 199 TQEAYEEAVKKLFEALDKLEQILSERRYLTGDQLTEADIRLFTTLVRFDPVYVGHFKCNLRRIRDYPNLWGYLRDLYQLP 278 (324)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCeeeccccchHhhhhhhheeEeecceEEeeeecccchhhcCchHHHHHHHHhcCc
Confidence 467889999999999999999999999999999999999999998875321 11 1122456999999999999999
Q ss_pred hHHhhh
Q 030158 78 KIKKFL 83 (182)
Q Consensus 78 ~~k~~~ 83 (182)
+|..+.
T Consensus 279 g~~~T~ 284 (324)
T COG0435 279 GFAETV 284 (324)
T ss_pred cccccc
Confidence 998764
No 64
>KOG2903 consensus Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.34 E-value=2.2e-07 Score=75.57 Aligned_cols=81 Identities=23% Similarity=0.284 Sum_probs=66.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhccCCC--eecCCCCCHHHHHHHHHHHHHHHh---hc--C-chhhccChhHHHHHHHHh
Q 030158 3 CMKAEEGAVAALKRALDALNIHLASNT--YLVGHSVTLADIVMICNLYYGFKL---IM--T-KSFTSEFPHVERYFWTVA 74 (182)
Q Consensus 3 nk~~~~~~~~~l~~~l~~Le~~L~~~~--fLvGe~lTlADi~l~~~l~~~~~~---~~--~-~~~~~~~P~L~rW~~~v~ 74 (182)
+++..+....++-..|+.+|+.|+.+. |++|+++|.|||.|++++.+.... .+ . ...+..||+|..|...|.
T Consensus 197 ~~e~Ye~~V~~lfe~LDr~E~vL~~~~~~f~~G~~LTeaDirLy~TiIRFD~VY~~hFKCn~~~ir~~Yp~l~~~lk~iY 276 (319)
T KOG2903|consen 197 KQEAYEEEVNQLFEALDRCEDVLGKNRKYFLCGDTLTEADIRLYTTIIRFDEVYVQHFKCNKKTIRDEYPNLHNWLKNIY 276 (319)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHhcccceEeeccccchhheeeeeeEEeehhhhheeeecchhhhhccCcHHHHHHHHHH
Confidence 466778889999999999999999876 999999999999999988764221 12 1 134779999999999998
Q ss_pred c-ChhHHhhh
Q 030158 75 N-QPKIKKFL 83 (182)
Q Consensus 75 ~-~P~~k~~~ 83 (182)
. .|+|..+.
T Consensus 277 ~~~~~~~~Tt 286 (319)
T KOG2903|consen 277 WNIPGFSSTT 286 (319)
T ss_pred hhccchhhcc
Confidence 7 89888753
No 65
>KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism]
Probab=98.07 E-value=3.9e-06 Score=66.32 Aligned_cols=81 Identities=20% Similarity=0.144 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHHHhccC---CCeecCCCCCHHHHHHHHHHHHHHH---hhcCchhhccChhHHHHHHHHhcChhHHhhh
Q 030158 10 AVAALKRALDALNIHLAS---NTYLVGHSVTLADIVMICNLYYGFK---LIMTKSFTSEFPHVERYFWTVANQPKIKKFL 83 (182)
Q Consensus 10 ~~~~l~~~l~~Le~~L~~---~~fLvGe~lTlADi~l~~~l~~~~~---~~~~~~~~~~~P~L~rW~~~v~~~P~~k~~~ 83 (182)
....+-..|..||++|.. +.||.|+++|+||+.+++=|+.+.. +..+-++.+.+++|.||+..+.++.+|....
T Consensus 124 ~e~~Ll~~L~~Ld~yL~sp~~~~Fl~Gd~lt~aDcsLlPKL~~i~va~k~yk~~~IP~~lt~V~rYl~~~ya~d~F~~tc 203 (221)
T KOG1422|consen 124 LEKALLKELEKLDDYLKSPSRRKFLDGDKLTLADCSLLPKLHHIKVAAKHYKNFEIPASLTGVWRYLKNAYARDEFTNTC 203 (221)
T ss_pred HHHHHHHHHHHHHHHhcCccCCccccCCeeeeehhhhchhHHHHHHHHHHhcCCCCchhhhHHHHHHHHHHhHHHhhcCC
Confidence 345677788999999985 6899999999999999998886532 2234445778999999999999999998876
Q ss_pred ccccccC
Q 030158 84 GDFKQAE 90 (182)
Q Consensus 84 ~~~~~~~ 90 (182)
.....+.
T Consensus 204 p~d~ei~ 210 (221)
T KOG1422|consen 204 PADQEII 210 (221)
T ss_pred chHHHHH
Confidence 6554444
No 66
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=97.98 E-value=4.7e-05 Score=54.93 Aligned_cols=72 Identities=19% Similarity=0.171 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHHHHHhccC-CCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcChhHHhhhc
Q 030158 7 EEGAVAALKRALDALNIHLAS-NTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLG 84 (182)
Q Consensus 7 ~~~~~~~l~~~l~~Le~~L~~-~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P~~k~~~~ 84 (182)
.+.+...+.+.+...+..|.. ++||.|+ .||||..++.++.++..++.. --+.+..|.+++-++|+|+.++.
T Consensus 41 s~~a~~~a~kL~~~a~~ll~~g~~~LFGe-wsIAD~dlA~ml~Rl~~~gd~-----vP~~l~~Ya~~qwqrpsVQ~Wla 113 (117)
T PF14834_consen 41 SEAAQAAAQKLIAVAERLLADGGPNLFGE-WSIADADLALMLNRLVTYGDP-----VPERLADYAERQWQRPSVQRWLA 113 (117)
T ss_dssp -HHHHHHHHHHHHHHHHHTTT--SSTTSS---HHHHHHHHHHHHHHTTT---------HHHHHHHHHHHT-HHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhccCCCCcccc-chHHHHHHHHHHHHHHHcCCC-----CCHHHHHHHHHHHCCHHHHHHHH
Confidence 355677788888888888876 5899998 999999999999998776533 24589999999999999999874
No 67
>KOG3027 consensus Mitochondrial outer membrane protein Metaxin 2, Metaxin 1-binding protein [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.42 E-value=0.0005 Score=54.57 Aligned_cols=74 Identities=16% Similarity=0.294 Sum_probs=62.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCc----hhhccChhHHHHHHHHhcC
Q 030158 3 CMKAEEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTK----SFTSEFPHVERYFWTVANQ 76 (182)
Q Consensus 3 nk~~~~~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~----~~~~~~P~L~rW~~~v~~~ 76 (182)
+....+...+++..+++.|..+|+..+||.|++.|-+|..+|..+..+....+.. .....|+||..+..||.++
T Consensus 171 ~~~~~DqVie~vdkc~~aLsa~L~~q~yf~g~~P~elDAlvFGHlytilTt~Lpn~ela~~lkkys~LlefcrrIeq~ 248 (257)
T KOG3027|consen 171 DDKTMDQVIEQVDKCCRALSAQLGSQPYFTGDQPTELDALVFGHLYTILTTRLPNMELANILKKYSNLLEFCRRIEQQ 248 (257)
T ss_pred ccccHHHHHHHHHHHHHHHHHHhcCCCccCCCCccHHHHHHHhhhHHhhhhcCCcHHHHHHHHHhHHHHHHHHHHHHH
Confidence 4556788899999999999999999999999999999999999988776654432 3477899999999998753
No 68
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=97.20 E-value=0.0002 Score=63.92 Aligned_cols=76 Identities=22% Similarity=0.283 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcChhHHhhhccc
Q 030158 11 VAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKFLGDF 86 (182)
Q Consensus 11 ~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P~~k~~~~~~ 86 (182)
...+...+..|+.+|.-++||+|.++|+||++++..+..-....-.......+.+|.||++-....++...++...
T Consensus 90 ~~~~s~~~~~ld~~l~~~t~lvg~sls~Ad~aiw~~l~~n~~~~~~lk~~k~~~~v~Rw~~~~~~~~a~~~v~~t~ 165 (712)
T KOG1147|consen 90 FDEISSSLSELDKFLVLRTFLVGNSLSIADFAIWGALHSNGMRQEQLKAKKDYQNVERWYDLPEFQEAHNKVLATL 165 (712)
T ss_pred hHHHHHHHHHHHhhhhHHHHhhccchhHHHHHHHHHHhcccchHHHHHhhCCchhhhhhcCcHhHHHHHHHHHHHH
Confidence 4567888999999999999999999999999999998852111100011246889999999555555555555444
No 69
>KOG4244 consensus Failed axon connections (fax) protein/glutathione S-transferase-like protein [Signal transduction mechanisms]
Probab=97.12 E-value=0.00064 Score=55.76 Aligned_cols=65 Identities=22% Similarity=0.328 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCc----hhhccChhHHHHHHHHhc
Q 030158 10 AVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTK----SFTSEFPHVERYFWTVAN 75 (182)
Q Consensus 10 ~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~----~~~~~~P~L~rW~~~v~~ 75 (182)
..+-+++-|..+++.|++..||.|+++|-+|.+++..|..++. .+.. -.-.++|+|..|.+||.+
T Consensus 204 i~ell~rDlr~i~~~Lg~KkflfGdkit~~DatvFgqLa~v~Y-P~~~~i~d~le~d~p~l~eYceRIr~ 272 (281)
T KOG4244|consen 204 IDELLHRDLRAISDYLGDKKFLFGDKITPADATVFGQLAQVYY-PFRSHISDLLEGDFPNLLEYCERIRK 272 (281)
T ss_pred HHHHHHHHHHHHHHHhCCCccccCCCCCcceeeehhhhhheec-cCCCcHHHHHhhhchHHHHHHHHHHH
Confidence 4556788899999999999999999999999999998876543 2221 124579999999999985
No 70
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=96.78 E-value=0.005 Score=45.75 Aligned_cols=67 Identities=21% Similarity=0.268 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcChhH
Q 030158 8 EGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKI 79 (182)
Q Consensus 8 ~~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P~~ 79 (182)
.....+++..|..|+..|.......| .+|+-||.+|++|+.+ ..+-+ ..=-|+|.+|+++|...-.|
T Consensus 58 ~~~i~~l~~~L~~Le~ll~~~~~~n~-~LS~dDi~lFp~LR~L-tivkg---i~~P~~V~~Y~~~~s~~t~V 124 (132)
T PF04399_consen 58 PELIAELNADLEELEPLLASPNAVNG-ELSIDDIILFPILRSL-TIVKG---IQWPPKVRAYMDRMSKATGV 124 (132)
T ss_dssp HHHHHHHHHHHHHHHHH-SCTTBTTS-S--HHHHHHHHHHHHH-CTCTT---S---HHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHHHHHhccccccCC-CCCHHHHHHHHHHhhh-hhccC---CcCCHHHHHHHHHHHHHcCC
Confidence 44567888888888888886665555 8999999999998854 33333 22246899999999876544
No 71
>KOG3028 consensus Translocase of outer mitochondrial membrane complex, subunit TOM37/Metaxin 1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.61 E-value=0.012 Score=49.46 Aligned_cols=70 Identities=16% Similarity=0.246 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCc----hhhccChhHHHHHHHHhcC
Q 030158 7 EEGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTK----SFTSEFPHVERYFWTVANQ 76 (182)
Q Consensus 7 ~~~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~----~~~~~~P~L~rW~~~v~~~ 76 (182)
.+........++..|.+.|++.+|++|++.|-.|..++..+..++...+.. .....++||.|+.+++.+.
T Consensus 161 e~~i~~~Aska~~~LS~~Lgs~kffFgd~psslDa~lfs~la~~~~~~Lp~~~Lq~~l~~~~NL~~~~~~i~s~ 234 (313)
T KOG3028|consen 161 EDQIYKDASKALNLLSTLLGSKKFFFGDKPSSLDALLFSYLAILLQVALPNDSLQVHLLAHKNLVRYVERIRSL 234 (313)
T ss_pred HHHHHHHHHHHHHHHHHHhcCceEeeCCCCchHHHHHHHHHHHHHhccCCchhHHHHHHhcchHHHHHHHHHHH
Confidence 445566778889999999999999999999999999999999866654432 1133499999999999863
No 72
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=96.17 E-value=0.026 Score=41.72 Aligned_cols=66 Identities=23% Similarity=0.234 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcChhH
Q 030158 9 GAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKI 79 (182)
Q Consensus 9 ~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P~~ 79 (182)
....+++..|..|+..|..... ++..+|+-||.+|++|+.+. .+-+ ..=-|+|.+|+++|.+.-.|
T Consensus 60 ~~i~~l~~~L~~l~~ll~~~~~-~n~~ls~DDi~lFp~LR~Lt-~vkg---i~~P~~V~~Y~~~~s~~t~V 125 (128)
T cd03199 60 QYIAALNALLEELDPLILSSEA-VNGQLSTDDIILFPILRNLT-LVKG---LVFPPKVKAYLERMSALTKV 125 (128)
T ss_pred HHHHHHHHHHHHHHHHHcCccc-cCCcCCHHHHHHHHHHhhhh-hhcC---CCCCHHHHHHHHHHHHHhCC
Confidence 3456677777778877754444 46679999999999998653 3333 22236899999999876543
No 73
>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]
Probab=96.05 E-value=0.015 Score=48.35 Aligned_cols=65 Identities=17% Similarity=0.131 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHHhc-cCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhc
Q 030158 10 AVAALKRALDALNIHL-ASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVAN 75 (182)
Q Consensus 10 ~~~~l~~~l~~Le~~L-~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~ 75 (182)
.++.+..+++..-..| .+++||.|...++||+.++.++..+....-.. ..-...+|..|+-+|.+
T Consensus 289 ~Re~lydA~d~Wvaalgknr~flGG~kPnLaDLsvfGvl~sm~gc~afk-d~~q~t~I~eW~~rmea 354 (370)
T KOG3029|consen 289 EREHLYDAADQWVAALGKNRPFLGGKKPNLADLSVFGVLRSMEGCQAFK-DCLQNTSIGEWYYRMEA 354 (370)
T ss_pred HHHHHHHHHHHHHHHhCCCCCccCCCCCchhhhhhhhhhhHhhhhhHHH-HHHhcchHHHHHHHHHH
Confidence 4555666666655666 46899999999999999999998765432111 24457899999999875
No 74
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=90.12 E-value=0.97 Score=34.83 Aligned_cols=39 Identities=21% Similarity=0.184 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHhccCC---CeecCCC-CCHHHHHHHHHHHHHH
Q 030158 13 ALKRALDALNIHLASN---TYLVGHS-VTLADIVMICNLYYGF 51 (182)
Q Consensus 13 ~l~~~l~~Le~~L~~~---~fLvGe~-lTlADi~l~~~l~~~~ 51 (182)
.-.+++..|++.|... .|+.|+. +|-+||.++..|..+.
T Consensus 112 ~a~~~l~~L~~~L~~~~~~~~~f~~~~psslD~L~~ayL~l~l 154 (168)
T PF11801_consen 112 LAMECLSLLEELLGEWEEARYFFGDSKPSSLDCLAFAYLALLL 154 (168)
T ss_pred HHHHHHHHHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHh
Confidence 3566788899999988 9999998 9999999999888543
No 75
>KOG1668 consensus Elongation factor 1 beta/delta chain [Transcription]
Probab=87.76 E-value=0.38 Score=38.87 Aligned_cols=60 Identities=20% Similarity=0.344 Sum_probs=48.3
Q ss_pred HHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcChhHHh
Q 030158 15 KRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKK 81 (182)
Q Consensus 15 ~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P~~k~ 81 (182)
.+.+..|+.+|.+.+|.-|..++-+|+.++..+.-- .....+++..||+.+|.++-....
T Consensus 10 ~~glk~l~~sLA~ks~~~g~~~s~edv~vf~al~~e-------p~s~~~v~~~~w~~~l~a~~~~~~ 69 (231)
T KOG1668|consen 10 PAGLKKLNKSLAEKSYIEGYQLSKEDVVVFAALGVE-------PQSARLVNAERWYSKLEALLRLLA 69 (231)
T ss_pred hhhhhhhhHhhhcccCCCCCCcccccceeehhcccC-------cchhhhhHHHHHHHHHHHHHHHHh
Confidence 567889999999999999999999999988876521 114578899999999987665553
No 76
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=77.56 E-value=5.7 Score=31.21 Aligned_cols=67 Identities=13% Similarity=0.135 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcChhHH
Q 030158 9 GAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIK 80 (182)
Q Consensus 9 ~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P~~k 80 (182)
....++...|+.|+..+...+- +...+++-||.+|++++.+.. +-+-.| -..|..|+.+|.+...+.
T Consensus 142 ~~~~~i~~dl~~l~~Li~~~s~-~n~~l~~ddi~vFplLRnlt~-v~gi~w---ps~v~dy~~~msektqV~ 208 (215)
T COG2999 142 QYLKRIQADLRALDKLIVGPSA-VNGELSEDDILVFPLLRNLTL-VAGIQW---PSRVADYRDNMSEKTQVN 208 (215)
T ss_pred HHHHHHHHHHHHHHHHhcCcch-hccccchhhhhhhHHhcccee-cccCCC---cHHHHHHHHHHHHhhCcc
Confidence 4456778888888888877663 344599999999999886533 223222 236999999998876554
No 77
>PF09868 DUF2095: Uncharacterized protein conserved in archaea (DUF2095); InterPro: IPR018662 This domain, found in various hypothetical prokaryotic proteins, has no known function.
Probab=74.56 E-value=1.8 Score=31.45 Aligned_cols=25 Identities=24% Similarity=0.557 Sum_probs=22.9
Q ss_pred CCCCCCCCCCCCCCchhhhhhhhcC
Q 030158 137 KPKNPLDLLPPSKMILDDWKRLYSN 161 (182)
Q Consensus 137 k~k~pl~~lp~~~f~ld~~Kr~ysn 161 (182)
|+|.|.|.+|=-..++++||+.|-+
T Consensus 2 ~kk~p~d~~~wqeyd~eEFkkkfP~ 26 (128)
T PF09868_consen 2 KKKKPIDEFPWQEYDIEEFKKKFPA 26 (128)
T ss_pred CCcCcccccchhHhhHHHHHHHhHH
Confidence 5788999999999999999999976
No 78
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=53.80 E-value=2.2 Score=34.25 Aligned_cols=78 Identities=19% Similarity=0.107 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHH-HhcChhHHhhhcccc
Q 030158 9 GAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWT-VANQPKIKKFLGDFK 87 (182)
Q Consensus 9 ~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~-v~~~P~~k~~~~~~~ 87 (182)
..+..+...|.+.+..|...++ .+.+++|+.+.+.+...........+...++++.+|+.+ ....+ .+.++.+..
T Consensus 91 ~~ra~v~~~l~~~~~~l~~~~~---~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~yl~g-~~~tlADl~ 166 (226)
T KOG0867|consen 91 KERAIVDQWLEFENGVLDPVTF---ERPILAPLLVGLPLNPTAVKELEAKLRKALDNLERFLKTQVYLAG-DQLTLADLS 166 (226)
T ss_pred HHHHHHHHHHHhhhcccccccc---cceeeecceecccCcchhhHHHHHHHHHHHHHHHHHHccCCcccC-CcccHHHHH
Confidence 4456677777777777776655 778899976666544444443344567789999999988 33334 666777777
Q ss_pred ccC
Q 030158 88 QAE 90 (182)
Q Consensus 88 ~~~ 90 (182)
.+.
T Consensus 167 ~~~ 169 (226)
T KOG0867|consen 167 LAS 169 (226)
T ss_pred Hhh
Confidence 776
No 79
>PF11732 Thoc2: Transcription- and export-related complex subunit; InterPro: IPR021726 The THO/TREX complex is the transcription- and export-related complex associated with spliceosomes that preferentially deal with spliced mRNAs as opposed to unspliced mRNAs. Thoc2 plays a role in RNA polymerase II (RNA pol II)-dependent transcription and is required for the stability of DNA repeats []. In humans, the TRE complex is comprised of the exon-junction-associated proteins Aly/REF and UAP56 together with the THO proteins THOC1 (hHpr1/p84), Thoc2 (hRlr1), THOC3 (hTex1), THOC5 (fSAP79), THOC6 (fSAP35), and THOC7 (fSAP24). Although much evidence indicates that the function of the TREX complex as an adaptor between the mRNA and components of the export machinery is conserved among eukaryotes, in Drosophila the majority of mRNAs can be exported from the nucleus independently of the THO complex []. This entry represents a conserved domain found towards the N terminus of these proteins.
Probab=44.74 E-value=65 Score=21.57 Aligned_cols=63 Identities=10% Similarity=0.157 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHh
Q 030158 8 EGAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVA 74 (182)
Q Consensus 8 ~~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~ 74 (182)
+.+..+++.+=..++-......|+. .+++ |+..++++.++....- .....+--++..|++++.
T Consensus 14 ~~il~Qie~YdNli~~vVe~~ky~t--~l~~-DvL~~~ll~~L~~~~r-~~~k~dg~~~s~Wlq~La 76 (77)
T PF11732_consen 14 DVILSQIESYDNLIEPVVESLKYFT--DLGY-DVLTFCLLERLSNPGR-SRLKDDGTNISQWLQSLA 76 (77)
T ss_pred HHHHHHHHHhhhhHHHHHHHHhhcc--hhhH-HHHHHHHHHHHhcccc-hhcCcCCCCHHHHHHHHh
Confidence 3344444443333333333335652 2444 9999999998753221 122345578999999875
No 80
>KOG1663 consensus O-methyltransferase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=37.70 E-value=10 Score=30.95 Aligned_cols=17 Identities=29% Similarity=0.218 Sum_probs=14.3
Q ss_pred CCCCCc---hhhhhhhhcCC
Q 030158 146 PPSKMI---LDDWKRLYSNT 162 (182)
Q Consensus 146 p~~~f~---ld~~Kr~ysn~ 162 (182)
..+||| +|.||+-|||-
T Consensus 146 ~~~tfDfaFvDadK~nY~~y 165 (237)
T KOG1663|consen 146 ESGTFDFAFVDADKDNYSNY 165 (237)
T ss_pred CCCceeEEEEccchHHHHHH
Confidence 678998 59999999953
No 81
>PF11120 DUF2636: Protein of unknown function (DUF2636); InterPro: IPR019995 Members of this protein family are found invariably together with genes of bacterial cellulose biosynthesis, and are presumed to be involved in the process []. Members average about 63 amino acids in length and are not uncharacterised. The gene has been designated both YhjT and BcsF (bacterial cellulose synthesis F).
Probab=35.61 E-value=64 Score=20.74 Aligned_cols=47 Identities=17% Similarity=0.133 Sum_probs=25.9
Q ss_pred CCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcChhHHhh
Q 030158 36 VTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIKKF 82 (182)
Q Consensus 36 lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P~~k~~ 82 (182)
+|+.||.=..++.-+....++--.+.-+|++.+++.++.-.|-+-+.
T Consensus 1 M~i~DiiQii~l~AlI~~pLGyl~~~~~~r~~~~lr~~l~~PRylK~ 47 (62)
T PF11120_consen 1 MNISDIIQIIILCALIFFPLGYLARRWLPRIRRTLRRRLFPPRYLKP 47 (62)
T ss_pred CCHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHHHhcCccccCc
Confidence 46777754444443333333322345577777777777666655443
No 82
>PRK15371 effector protein YopJ; Provisional
Probab=35.26 E-value=1e+02 Score=25.90 Aligned_cols=44 Identities=14% Similarity=0.147 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHhccCCCeecCCCCCHHHHHHHHHHHHHHHh
Q 030158 9 GAVAALKRALDALNIHLASNTYLVGHSVTLADIVMICNLYYGFKL 53 (182)
Q Consensus 9 ~~~~~l~~~l~~Le~~L~~~~fLvGe~lTlADi~l~~~l~~~~~~ 53 (182)
...++|..++..||+.|.++.++ .+.++..||-+.+.|.-....
T Consensus 23 ~~~~~L~~~i~~le~~~~~G~~~-~~~~~~~Di~~lp~lv~~~N~ 66 (287)
T PRK15371 23 ISNEELKNIITQLEDDIADGSWI-HKNYARTDLEVMPALVAQANN 66 (287)
T ss_pred hhHHHHHHHHHHHHHHHHcCCCC-CchhHHhhHHhhHHHHHHHhc
Confidence 45678999999999999998887 567899999999988876543
No 83
>PF00392 GntR: Bacterial regulatory proteins, gntR family; InterPro: IPR000524 Many bacterial transcription regulation proteins bind DNA through a helix-turn-helix (HTH) motif, which can be classified into subfamilies on the basis of sequence similarities. The HTH GntR family has many members distributed among diverse bacterial groups that regulate various biological processes. It was named GntR after the Bacillus subtilis repressor of the gluconate operon []. Family members include GntR, HutC, KorA, NtaR, FadR, ExuR, FarR, DgoR and PhnF. The crystal structure of the FadR protein has been determined []. In general, these proteins contain a DNA-binding HTH domain at the N terminus, and an effector-binding or oligomerisation domain at the C terminus (IPR011711 from INTERPRO). The DNA-binding domain is well conserved in structure for the whole of the GntR family, consisting of a 3-helical bundle core with a small beta-sheet (wing); the GntR winged helix structure is similar to that found in several other transcriptional regulator families. The regions outside the DNA-binding domain are more variable and are consequently used to define GntR subfamilies []. This entry represents the N-terminal DNA-binding domain of the GntR family.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 1HW1_B 1H9T_A 1HW2_A 1H9G_A 1E2X_A 3IHU_A 3C7J_A 2RA5_A 3BY6_C 3IC7_A ....
Probab=35.03 E-value=42 Score=20.90 Aligned_cols=31 Identities=13% Similarity=0.167 Sum_probs=22.7
Q ss_pred HHHHHHHHHhccCCCeecCCCC-CHHHHHHHH
Q 030158 15 KRALDALNIHLASNTYLVGHSV-TLADIVMIC 45 (182)
Q Consensus 15 ~~~l~~Le~~L~~~~fLvGe~l-TlADi~l~~ 45 (182)
..+...|...+..+.|-.|++| |..+|+--.
T Consensus 3 ~~i~~~l~~~I~~g~~~~g~~lps~~~la~~~ 34 (64)
T PF00392_consen 3 EQIYDQLRQAILSGRLPPGDRLPSERELAERY 34 (64)
T ss_dssp HHHHHHHHHHHHTTSS-TTSBE--HHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCCCEeCCHHHHHHHh
Confidence 3566778888888999999999 998886544
No 84
>KOG0939 consensus E3 ubiquitin-protein ligase/Putative upstream regulatory element binding protein [Posttranslational modification, protein turnover, chaperones; Transcription]
Probab=32.94 E-value=21 Score=33.44 Aligned_cols=33 Identities=27% Similarity=0.292 Sum_probs=23.7
Q ss_pred CCCC--CCCCCchhhhhh---hhcCCCccchhhhhhhhhhh
Q 030158 142 LDLL--PPSKMILDDWKR---LYSNTKSNFREVAIKGTLSS 177 (182)
Q Consensus 142 l~~l--p~~~f~ld~~Kr---~ysn~~~~~~~~a~~~fw~~ 177 (182)
|++| |-+..++||||- +++...+ ..-|.|||+-
T Consensus 593 LELLisGlpeidvdd~k~nt~y~~~~~~---~~~i~wFWra 630 (720)
T KOG0939|consen 593 LELLISGLPEIDVDDLKANTEYLGYTKA---SSVIQWFWRA 630 (720)
T ss_pred HHHHHcCCCcccHHHHHhhhhhhccccc---chHHHHHHHH
Confidence 4555 667899999994 4555555 4479999974
No 85
>TIGR03493 cellullose_BcsF celllulose biosynthesis operon protein BcsF/YhjT. Members of this protein family are found invariably together with genes of bacterial cellulose biosynthesis, and are presumed to be involved in the process. Members average about 63 amino acids in length and are not uncharacterized. The gene has been designated both YhjT and BcsF (bacterial cellulose synthesis F).
Probab=32.03 E-value=80 Score=20.22 Aligned_cols=45 Identities=9% Similarity=0.081 Sum_probs=20.8
Q ss_pred CCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHhcChhHH
Q 030158 36 VTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVANQPKIK 80 (182)
Q Consensus 36 lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~~~P~~k 80 (182)
+|+.||.=..++.-+....++--.+-.+|++..+...+.-.|-+-
T Consensus 1 M~i~DilQli~lcALIf~pLgyl~~r~~~r~r~~~r~~~~~pRYl 45 (62)
T TIGR03493 1 MNISDILQLVLLCALIFFPLGYLARRSLRRIRTTLRLRLASPRYL 45 (62)
T ss_pred CCHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHhcCCcccc
Confidence 577888655554444333333111233455555444444444433
No 86
>COG5021 HUL4 Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones]
Probab=31.44 E-value=31 Score=33.51 Aligned_cols=30 Identities=20% Similarity=0.224 Sum_probs=20.2
Q ss_pred CCCC-Cchhhhhhh--hcCCCccchhhhhhhhhhh
Q 030158 146 PPSK-MILDDWKRL--YSNTKSNFREVAIKGTLSS 177 (182)
Q Consensus 146 p~~~-f~ld~~Kr~--ysn~~~~~~~~a~~~fw~~ 177 (182)
|-.. +|+|+||+. |..=.. -...|-||||-
T Consensus 751 G~~e~iDidd~K~~T~Y~GY~~--~s~~I~wFWei 783 (872)
T COG5021 751 GIPEDIDIDDWKSNTAYHGYTE--DSPIIVWFWEI 783 (872)
T ss_pred CCCccccHHHHhhccccccccc--CCcHHHHHHHH
Confidence 4445 999999974 444222 13589999974
No 87
>PF04255 DUF433: Protein of unknown function (DUF433); InterPro: IPR007367 This is a family of uncharacterised proteins.; PDB: 2GA1_B.
Probab=29.17 E-value=33 Score=21.17 Aligned_cols=39 Identities=13% Similarity=0.267 Sum_probs=20.5
Q ss_pred hccCCCeecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHH
Q 030158 24 HLASNTYLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVE 67 (182)
Q Consensus 24 ~L~~~~fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~ 67 (182)
.+.+.+-+.|.|+++.+|.-...-.+.. .+....||+|.
T Consensus 7 ~~~G~P~i~GTRI~v~~i~~~~~~G~s~-----eeI~~~yp~Lt 45 (56)
T PF04255_consen 7 ILGGQPVIRGTRIPVRDILDLLAAGESP-----EEIAEDYPSLT 45 (56)
T ss_dssp SGGG--EETTSS-BHHHHHHHHHTT--H-----HHHHHHSTT--
T ss_pred ccCCcceEcCceecHHHHHHHHHcCCCH-----HHHHHHCCCCC
Confidence 3556788999999999887544222111 13356788664
No 88
>PF12643 MazG-like: MazG-like family
Probab=28.37 E-value=64 Score=22.56 Aligned_cols=38 Identities=21% Similarity=0.492 Sum_probs=24.2
Q ss_pred CHHHHHHHHHHHHHHHhhcCc------------hhhccChhHHHHHHHHhc
Q 030158 37 TLADIVMICNLYYGFKLIMTK------------SFTSEFPHVERYFWTVAN 75 (182)
Q Consensus 37 TlADi~l~~~l~~~~~~~~~~------------~~~~~~P~L~rW~~~v~~ 75 (182)
++|||+++|.+. +...+++. .....||.+..|+..++.
T Consensus 40 eLAdvii~~ylL-a~rLGid~~~lD~~i~~KL~~~~~k~~~~Ek~~gdls~ 89 (98)
T PF12643_consen 40 ELADVIIYCYLL-ADRLGIDFRELDEIIKEKLKKNIEKYPVLEKWYGDLSK 89 (98)
T ss_pred HHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHhcccccchHHHHhccHHH
Confidence 789999998876 44555551 123457777777665543
No 89
>COG3433 Aryl carrier domain [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=28.34 E-value=1.5e+02 Score=19.72 Aligned_cols=40 Identities=18% Similarity=0.141 Sum_probs=28.0
Q ss_pred CHHHHHHHHHHHHHHHhhcCchh--hccChhHHHHHHHHhcC
Q 030158 37 TLADIVMICNLYYGFKLIMTKSF--TSEFPHVERYFWTVANQ 76 (182)
Q Consensus 37 TlADi~l~~~l~~~~~~~~~~~~--~~~~P~L~rW~~~v~~~ 76 (182)
++--|-+...+.++...+.+..| +...|.|..|.+.|..+
T Consensus 28 GLDSiR~M~L~~~wR~~G~~i~F~~La~~PTl~aW~qLl~~~ 69 (74)
T COG3433 28 GLDSIRMMALLERWRKRGADIDFAQLAANPTLAAWWQLLSTR 69 (74)
T ss_pred chhHHHHHHHHHHHHHcCCcccHHHHHhCccHHHHHHHHHhc
Confidence 34455666666776666655444 67899999999999764
No 90
>PF06947 DUF1290: Protein of unknown function (DUF1290); InterPro: IPR009709 This family consists of several bacterial small basic proteins of around 100 residues in length. The function of this family is unknown.
Probab=26.37 E-value=59 Score=22.35 Aligned_cols=19 Identities=16% Similarity=0.495 Sum_probs=11.5
Q ss_pred cCCCCCHHHHHHHHHHHHHH
Q 030158 32 VGHSVTLADIVMICNLYYGF 51 (182)
Q Consensus 32 vGe~lTlADi~l~~~l~~~~ 51 (182)
.|+++++ |++++.++..+.
T Consensus 55 lGd~LGv-~Ly~aavv~fG~ 73 (88)
T PF06947_consen 55 LGDRLGV-DLYYAAVVVFGI 73 (88)
T ss_pred HHhhcCc-hhHHHHHHHHHH
Confidence 3666666 666666665543
No 91
>PF00357 Integrin_alpha: Integrin alpha cytoplasmic region; InterPro: IPR018184 Some alpha subunits are cleaved post- translationally to produce a heavy and a light chain linked by a disulphide bond [, ]. Integrin alpha chains share a conserved sequence which is found at the beginning of the cytoplasmic domain, just after the end of the transmembrane region. Within the N-terminal domain of alpha subunits, seven sequence repeats, each of approximately 60 amino acids, have been found []. It has been predicted that these repeats assume the beta-propeller fold. The domains contain seven four-stranded beta-sheets arranged in a torus around a pseudosymmetry axis []. Integrin ligands and a putative Mg2+ ion are predicted to bind to the upper face of the propeller, in a manner analogous to the way in which the trimeric G-protein beta subunit (G beta) (which also has a beta-propeller fold) binds the G protein alpha subunit []. Integrin cytoplasmic domains are normally less than 50 amino acids in length, with the beta-subunit sequences exhibiting greater homology to each other than the alpha-subunit sequences []. This is consistent with current evidence that the beta subunit is the principal site for binding of cytoskeletal and signalling molecules, whereas the alpha subunit has a regulatory role. The first ten residues of the alpha-subunit cytoplasmic domain appear to form an alpha helix that is terminated by a proline residue. The remainder of the domain is highly acidic in nature and this loops back to contact the membrane-proximal lysine anchor residue. This entry represents the conserved site of the C-terminal integrin alpha chain. ; PDB: 2LKJ_A 2LKE_A 2K8O_A 1DPK_A 2K9J_A 1DPQ_A 1S4W_A 1M8O_A 2K1A_A 2KNC_A ....
Probab=25.16 E-value=32 Score=15.72 Aligned_cols=8 Identities=25% Similarity=0.318 Sum_probs=5.8
Q ss_pred hhhhhcCC
Q 030158 155 WKRLYSNT 162 (182)
Q Consensus 155 ~Kr~ysn~ 162 (182)
|||.|-..
T Consensus 5 FKR~~~~~ 12 (15)
T PF00357_consen 5 FKRQRPPQ 12 (15)
T ss_dssp HHHHHHHC
T ss_pred ccccCccc
Confidence 78988644
No 92
>cd06891 PX_Vps17p The phosphoinositide binding Phox Homology domain of yeast sorting nexin Vps17p. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. Vsp17p forms a dimer with Vps5p, the yeast counterpart of human SNX1, and is part of the retromer complex that mediates the transport of the carboxypeptidase Y receptor Vps10p from endosomes to Golgi. Similar to Vps5p and SNX1, Vps17p harbors a Bin/Amphiphysin/Rvs (BAR) domain, which detects membrane curvatur
Probab=25.04 E-value=49 Score=24.76 Aligned_cols=19 Identities=21% Similarity=0.497 Sum_probs=16.1
Q ss_pred ChhHHHHHHHHhcChhHHh
Q 030158 63 FPHVERYFWTVANQPKIKK 81 (182)
Q Consensus 63 ~P~L~rW~~~v~~~P~~k~ 81 (182)
.-.|.+|+++|..+|.+..
T Consensus 111 r~~LqrfL~RV~~hP~L~~ 129 (140)
T cd06891 111 KANLQRWFNRVCSDPILIR 129 (140)
T ss_pred HHHHHHHHHHHhCChhhcc
Confidence 4689999999999997764
No 93
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=23.76 E-value=48 Score=25.55 Aligned_cols=43 Identities=16% Similarity=0.163 Sum_probs=28.7
Q ss_pred eecCCCCCHHHHHHHHHHHHHHHhhcCchhhccChhHHHHHHHHh
Q 030158 30 YLVGHSVTLADIVMICNLYYGFKLIMTKSFTSEFPHVERYFWTVA 74 (182)
Q Consensus 30 fLvGe~lTlADi~l~~~l~~~~~~~~~~~~~~~~P~L~rW~~~v~ 74 (182)
-++|||+ +.||.++..+..+ .....+..+..-+-|.++..++.
T Consensus 143 ~~vGDRl-fTDI~~aN~mGs~-gVw~~~gv~~~~n~i~~~~~~l~ 185 (190)
T KOG2961|consen 143 IMVGDRL-FTDIVYANRMGSL-GVWTEPGVRAEENFIVRQVRRLE 185 (190)
T ss_pred EEEccch-hhhHhhhhhccce-eEEecccccccchHHHHHHHHHH
Confidence 6889988 7899999887643 22233333455666777777765
No 94
>PF04827 Plant_tran: Plant transposon protein; InterPro: IPR006912 This entry represents a putative Harbinger transposase-derived nuclease, which is thought to have nuclease activity. However it does not have transposase activity [, ]. ; GO: 0016788 hydrolase activity, acting on ester bonds
Probab=23.21 E-value=90 Score=24.89 Aligned_cols=43 Identities=23% Similarity=0.296 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHHHhccC--CCeecCCCCCHHHHHHHHHHHH
Q 030158 7 EEGAVAALKRALDALNIHLAS--NTYLVGHSVTLADIVMICNLYY 49 (182)
Q Consensus 7 ~~~~~~~l~~~l~~Le~~L~~--~~fLvGe~lTlADi~l~~~l~~ 49 (182)
.+.++..+++++++|-.++.- ++...=+.-++++|+.+|++..
T Consensus 150 QE~~RKDVErAFGVLQaRfaIi~~p~r~w~~~~l~~Im~aCiILH 194 (205)
T PF04827_consen 150 QESARKDVERAFGVLQARFAIIRGPARLWDREDLANIMRACIILH 194 (205)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCchhccCHHHHHHHHHHHHHhh
Confidence 356788999999999988763 3433445568999999999875
No 95
>PF08674 AChE_tetra: Acetylcholinesterase tetramerisation domain; InterPro: IPR014788 Cholinesterase enzymes are members of the broader alpha/beta hydrolase family and can be dividied into two distinct groups: those that catalyse the hydrolysis of acetylcholine to choline and acetate (acetylcholinesterases 3.1.1.7 from EC) acetylcholine + H2O -> choline + acetate and those that catalyse the conversion of other acylcholines to a choline and a weak acid (cholinesterases 3.1.1.8 from EC) an acylcholine + H2O -> choline + a carboxylate Acetylcholinesterase also acts on a variety of acetic esters and catalyses transacetylations. It is the most intensively studied of the cholinesterase enzymes due to its key physiological role in the turnover of the neurotransmitter acylcholine []. This enzyme is found in, or attached to, cellular or basement membranes of presynaptic cholinergic neurons and postsynaptic cholinoceptive cells within the neuromuscular junction. Signal transmission at the neuromuscular junction involves the release of acylcholine, its interaction with the acycholine receptor and hydrolysis, all occuring in a period of a few milliseconds. Rapid hydrolysis of the newly released aceytlcholine is vital in order to prevent continuous firing of the nerve impulses []. Consistent with its role in this process, acetylcholinesterase has an unusually high turnover number, ensuring that acetylcholine is broken down quickly. There is evidence to suggest that acetylcholinesterase has additional important roles including involvement in neuronal adhesion, the formation of Alzheimer fibrils, and neurite growth [, , ]. The 3D structure of acetylcholinesterase and a cholinesterase have been determined [, ]. These proteins share the 3-layer alpha-beta-alpha sandwich fold common to members of the alpha/beta hydrolase family. Surprisingly, given the high turnover number of acetylcholinesterase, the active site of these enzymes is located at the bottom of a deep and narrow cleft, named the active-site gorge. The acetylcholinesterase tetramerisation domain is found at the C terminus and forms a left handed superhelix. ; GO: 0004091 carboxylesterase activity, 0016020 membrane; PDB: 1VZJ_A.
Probab=20.74 E-value=50 Score=18.85 Aligned_cols=8 Identities=38% Similarity=1.070 Sum_probs=6.4
Q ss_pred hhhhhhhh
Q 030158 152 LDDWKRLY 159 (182)
Q Consensus 152 ld~~Kr~y 159 (182)
|.+||++|
T Consensus 18 M~~WknqF 25 (37)
T PF08674_consen 18 MMDWKNQF 25 (37)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 67888886
No 96
>PF00758 EPO_TPO: Erythropoietin/thrombopoietin; InterPro: IPR001323 Erythropoietin, a plasma glycoprotein, is the primary physiological mediator of erythropoiesis []. It is involved in the regulation of the level of peripheral erythrocytes by stimulating the differentiation of erythroid progenitor cells, found in the spleen and bone marrow, into mature erythrocytes []. It is primarily produced in adult kidneys and foetal liver, acting by attachment to specific binding sites on erythroid progenitor cells, stimulating their differentiation []. Severe kidney dysfunction causes reduction in the plasma levels of erythropoietin, resulting in chronic anaemia - injection of purified erythropoietin into the blood stream can help to relieve this type of anaemia. Levels of erythropoietin in plasma fluctuate with varying oxygen tension of the blood, but androgens and prostaglandins also modulate the levels to some extent []. Erythropoietin glycoprotein sequences are well conserved, a consequence of which is that the hormones are cross-reactive among mammals, i.e. that from one species, say human, can stimulate erythropoiesis in other species, say mouse or rat []. Thrombopoeitin (TPO), a glycoprotein, is the mammalian0 hormone which functions as a megakaryocytic lineage specific growth and differentiation factor affecting the proliferation and maturation from their committed progenitor cells acting at a late stage of megakaryocyte development. It acts as a circulating regulator of platelet numbers.; GO: 0005179 hormone activity, 0005576 extracellular region; PDB: 1EER_A 1CN4_C 1BUY_A 1V7N_Z 1V7M_X.
Probab=20.58 E-value=26 Score=26.98 Aligned_cols=15 Identities=20% Similarity=0.625 Sum_probs=10.9
Q ss_pred CCCCCCCchhhhhhh
Q 030158 144 LLPPSKMILDDWKRL 158 (182)
Q Consensus 144 ~lp~~~f~ld~~Kr~ 158 (182)
.+|-..||+++||+.
T Consensus 38 ~vP~t~vnf~~Wk~k 52 (165)
T PF00758_consen 38 TVPDTDVNFYEWKKK 52 (165)
T ss_dssp EEE-TTB-CHHHCCS
T ss_pred ecCceeeeHHHHHHh
Confidence 468889999999985
Done!