Query 030162
Match_columns 182
No_of_seqs 134 out of 1151
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 15:14:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030162.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030162hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3o2u_A NEDD8-conjugating enzym 100.0 2.8E-52 9.5E-57 325.6 19.0 179 1-182 3-188 (190)
2 2nvu_C NEDD8-conjugating enzym 100.0 5.4E-53 1.8E-57 327.0 12.6 176 1-182 3-179 (180)
3 1y8x_A Ubiquitin-conjugating e 100.0 1.1E-49 3.7E-54 303.4 17.3 157 25-182 2-159 (160)
4 4gpr_A Ubiquitin-conjugating e 100.0 1.2E-47 4E-52 289.7 16.6 145 27-173 2-150 (151)
5 2aak_A UBC1, ubiquitin conjuga 100.0 1.3E-47 4.3E-52 289.9 16.2 147 26-174 1-151 (152)
6 1ayz_A UBC2, ubiquitin-conjuga 100.0 1.3E-47 4.3E-52 294.3 15.2 147 26-174 1-151 (169)
7 1zdn_A Ubiquitin-conjugating e 100.0 1.2E-47 3.9E-52 291.7 14.9 148 23-172 7-158 (158)
8 2c2v_B Ubiquitin-conjugating e 100.0 4.7E-48 1.6E-52 292.8 12.5 147 27-175 3-153 (154)
9 2ayv_A Ubiquitin-conjugating e 100.0 3.2E-47 1.1E-51 291.3 16.0 145 26-172 18-166 (166)
10 2ucz_A UBC7, ubiquitin conjuga 100.0 2.9E-47 9.8E-52 291.5 15.5 147 26-173 1-164 (165)
11 2c4o_A Ubiquitin-conjugating e 100.0 6.7E-47 2.3E-51 289.3 17.0 146 25-172 15-164 (165)
12 2e2c_A Ubiquitin conjugating e 100.0 2.2E-47 7.6E-52 289.6 14.2 149 22-173 2-154 (156)
13 1z2u_A Ubiquitin-conjugating e 100.0 5.2E-47 1.8E-51 285.9 15.8 144 27-172 2-149 (150)
14 3h8k_A Ubiquitin-conjugating e 100.0 6.4E-47 2.2E-51 289.3 16.2 144 28-172 2-162 (164)
15 1yh2_A HSPC150 protein similar 100.0 1.5E-46 5.2E-51 288.4 16.8 147 27-175 2-156 (169)
16 3rcz_B SUMO-conjugating enzyme 100.0 1.5E-46 5.2E-51 286.7 16.1 148 25-173 6-163 (163)
17 2r0j_A Ubiquitin carrier prote 100.0 1E-46 3.4E-51 284.0 14.5 142 31-174 3-148 (149)
18 2bep_A Ubiquitin-conjugating e 100.0 1.5E-46 5.2E-51 285.9 15.4 148 25-174 4-159 (159)
19 3fn1_B NEDD8-conjugating enzym 100.0 2.2E-46 7.4E-51 287.1 15.9 150 22-172 7-166 (167)
20 1i7k_A Ubiquitin-conjugating e 100.0 1.6E-46 5.6E-51 290.3 14.2 147 26-175 27-177 (179)
21 1jat_A Ubiquitin-conjugating e 100.0 5.5E-47 1.9E-51 287.2 11.4 145 28-174 4-152 (155)
22 1fxt_A Ubiquitin-conjugating e 100.0 8.4E-47 2.9E-51 284.5 12.1 142 30-172 2-148 (149)
23 2gjd_A Ubiquitin-conjugating e 100.0 3.1E-46 1.1E-50 283.6 15.2 146 26-172 1-156 (157)
24 2pwq_A Ubiquitin conjugating e 100.0 4.7E-46 1.6E-50 295.2 15.2 151 25-177 19-174 (216)
25 2grr_A Ubiquitin-conjugating e 100.0 7.7E-46 2.6E-50 282.5 15.6 148 25-173 3-160 (161)
26 3bzh_A Ubiquitin-conjugating e 100.0 1.1E-45 3.9E-50 288.9 16.2 143 28-172 47-193 (194)
27 3k9o_A Ubiquitin-conjugating e 100.0 5.9E-46 2E-50 292.4 14.5 149 26-176 2-158 (201)
28 2f4z_A Tgtwinscan_2721 - E2 do 100.0 7.4E-46 2.5E-50 289.6 14.6 147 25-173 28-192 (193)
29 1yrv_A Ubiquitin-conjugating l 100.0 7.8E-46 2.7E-50 284.2 14.2 146 22-170 16-168 (169)
30 3rz3_A Ubiquitin-conjugating e 100.0 2E-45 7E-50 285.4 14.9 145 27-172 5-172 (183)
31 1tte_A Ubiquitin-conjugating e 100.0 7.3E-46 2.5E-50 293.9 12.0 147 29-176 2-153 (215)
32 2awf_A Ubiquitin-conjugating e 100.0 1E-45 3.4E-50 284.5 12.2 143 24-167 12-172 (172)
33 1wzv_A Ubiquitin-conjugating e 100.0 2.7E-45 9.2E-50 277.9 14.3 145 29-174 4-152 (155)
34 3e46_A Ubiquitin-conjugating e 100.0 3.4E-45 1.2E-49 296.1 15.1 153 24-178 52-212 (253)
35 1c4z_D UBCH7, ubiquitin conjug 100.0 6.4E-45 2.2E-49 275.6 12.9 146 29-175 2-151 (154)
36 2onu_A Ubiquitin-conjugating e 100.0 9.5E-46 3.2E-50 279.5 8.4 145 29-176 2-150 (152)
37 2y9m_A Ubiquitin-conjugating e 100.0 7.8E-45 2.7E-49 279.6 13.2 149 25-173 2-168 (172)
38 2z5d_A Ubiquitin-conjugating e 100.0 1E-44 3.4E-49 280.0 10.4 143 28-174 24-170 (179)
39 1yf9_A Ubiquitin carrier prote 100.0 1.9E-44 6.6E-49 277.0 10.1 142 29-174 12-157 (171)
40 4ddg_A Ubiquitin-conjugating e 100.0 2E-43 6.9E-48 303.2 14.2 151 28-180 2-156 (399)
41 4ds2_A Ubiquitin-conjugating e 100.0 4.1E-42 1.4E-46 263.3 9.2 141 24-166 3-164 (167)
42 2q0v_A Ubiquitin-conjugating e 100.0 1.9E-40 6.5E-45 251.2 8.6 133 23-156 15-156 (156)
43 3ceg_A Baculoviral IAP repeat- 100.0 5.4E-39 1.8E-43 266.9 11.7 149 24-173 71-243 (323)
44 2a4d_A Ubiquitin-conjugating e 100.0 1E-38 3.5E-43 242.4 11.4 127 23-150 19-156 (160)
45 2fo3_A Ubiquitin-conjugating e 100.0 1.1E-38 3.8E-43 233.5 11.2 113 28-142 5-122 (125)
46 2h2y_A Ubiquitin-conjugating e 100.0 4.9E-38 1.7E-42 233.1 13.2 117 23-141 14-135 (136)
47 1jat_B Ubiquitin-conjugating e 100.0 1.7E-39 5.9E-44 241.6 4.7 125 28-153 5-138 (138)
48 2a7l_A Hypothetical ubiquitin- 100.0 2E-37 6.7E-42 229.7 10.5 114 22-137 16-136 (136)
49 2hlw_A Ubiquitin-conjugating e 100.0 7.8E-38 2.7E-42 239.9 7.6 123 27-150 33-166 (170)
50 2f4w_A Ubiquitin-conjugating e 100.0 4.6E-37 1.6E-41 239.0 6.0 119 21-143 6-131 (187)
51 1zuo_A Hypothetical protein LO 100.0 2E-36 6.7E-41 235.2 1.4 138 23-170 21-179 (186)
52 2z6o_A UFM1-conjugating enzyme 99.9 2.6E-25 9E-30 167.2 0.8 99 26-130 29-144 (172)
53 3r3q_A Suppressor protein STP2 99.8 2.8E-19 9.6E-24 135.3 8.3 89 54-143 57-161 (162)
54 3kpa_A Probable ubiquitin fold 99.6 3.6E-17 1.2E-21 120.5 -0.6 96 27-129 32-145 (168)
55 3obq_A Tumor susceptibility ge 99.5 2.3E-14 8E-19 106.5 7.6 80 54-138 50-138 (146)
56 2ebm_A RWD domain-containing p 95.4 0.035 1.2E-06 39.2 6.1 41 57-97 37-78 (128)
57 2ebk_A RWD domain-containing p 94.3 0.22 7.4E-06 35.1 7.7 40 57-96 39-78 (128)
58 2yz0_A Serine/threonine-protei 94.1 0.12 4.1E-06 36.9 6.2 41 57-97 45-85 (138)
59 1tt5_E Ubiquitin-conjugating e 93.1 0.061 2.1E-06 27.5 2.1 15 1-15 1-15 (26)
60 2day_A Ring finger protein 25; 92.8 0.33 1.1E-05 34.1 6.5 25 74-98 59-83 (128)
61 2daw_A RWD domain containing p 92.0 0.44 1.5E-05 34.8 6.6 23 75-97 76-98 (154)
62 1ukx_A GCN2, GCN2 EIF2alpha ki 91.4 0.26 8.9E-06 35.0 4.6 39 58-96 45-85 (137)
63 3zqs_A E3 ubiquitin-protein li 91.2 0.63 2.2E-05 35.3 6.7 64 55-137 23-87 (186)
64 2dax_A Protein C21ORF6; RWD do 90.7 0.32 1.1E-05 35.4 4.6 24 75-98 74-97 (152)
65 2cwb_A Chimera of immunoglobul 59.3 1.9 6.6E-05 29.7 0.0 30 139-168 21-50 (108)
66 2fkn_A Urocanate hydratase; ro 33.0 56 0.0019 28.4 4.9 26 146-171 277-302 (552)
67 1x87_A Urocanase protein; stru 32.4 59 0.002 28.3 4.9 26 146-171 276-301 (551)
68 1uwk_A Urocanate hydratase; hy 32.1 60 0.0021 28.3 4.9 25 147-171 282-306 (557)
69 2jrw_A Cyclic extended PEP.1; 30.5 20 0.00068 17.5 1.0 17 87-103 4-20 (26)
70 2bum_A Protocatechuate 3,4-dio 23.4 67 0.0023 24.4 3.4 25 72-96 109-138 (209)
No 1
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=2.8e-52 Score=325.57 Aligned_cols=179 Identities=42% Similarity=0.777 Sum_probs=168.3
Q ss_pred CcchhhHHHHHHHHHhhhcCCCCCCCCcHHHHHHHhh-hCCCCCCCceEEc---cCCCCCce---EEEEEEeCCCCCCCC
Q 030162 1 MIKLFKVKEKQRENAENANGKTPVKKQSAGELRLHRG-SVIQPPSARFITF---PNGKDDLM---NFEVSIRPDEGYYVG 73 (182)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~RL~~E-~~l~~~~~~~~~~---~~~~~n~~---~w~~~igp~~tpy~g 73 (182)
||+|+.+++|++++.++.. ++....+.+.+||++| ++++.++++++.+ +. ++|++ +|+++|+|++|||+|
T Consensus 3 m~~l~~~~~~~~~~~~~~~--~~~~~~s~a~~RL~kEl~~l~~~~~i~~~~~~~p~-~~nl~~~~~w~~~I~p~~tpyeg 79 (190)
T 3o2u_A 3 MLKLRQLQKKKQKENENSS--SIQPNLSAARIRLKRDLDSLDLPPTVTLNVITSPD-SADRSQSPKLEVIVRPDEGYYNY 79 (190)
T ss_dssp HHHHHHHHHHHHHHHHHHH--SSSCCCCHHHHHHHHHHHTCCCCTTEEEEEEECTT-CCCTTSCCEEEEEECCSSSTTTT
T ss_pred hHHHHHHHHHHHHHHHhcC--CCCCCccHHHHHHHHHHHhccCCCCEEEEecCCCC-CccCCcCCeEEEEEcCCCCCCCC
Confidence 8999999999988876552 5667788999999999 9998788888864 66 78999 999999888899999
Q ss_pred CEEEEEEEcCCCCCCCCCceeeecccccccccCCCceEcccccCccCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHH
Q 030162 74 GTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVL 153 (182)
Q Consensus 74 g~f~~~i~fp~~YP~~pP~v~f~t~i~HPnI~~~G~vc~~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~a~~~~ 153 (182)
|+|+++|.||++||++||+|+|.|+||||||+.+|.||+++|.++|+|++|+++||.+|+++|.+|++++|+|.+||.+|
T Consensus 80 g~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~~pln~~aa~~~ 159 (190)
T 3o2u_A 80 GSINFNLDFNEVYPIEPPKVVCLKKIFHPNIDLKGNVCLNILREDWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKLL 159 (190)
T ss_dssp CCEEEEEECCTTTTTSCCEEEECSCCCCTTBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHH
T ss_pred CEEEEEEECCCCCCCCCceeEEecCcccCCCCCCCeEechhccCCCCCCCCHHHHHHHHHHHHhCCCCCcchhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCHHHHHHHHHHHHhcCCCCCcccccCC
Q 030162 154 RDNPKLFESNVRRAMAGGYVGQTFFIRCI 182 (182)
Q Consensus 154 ~~~~~~f~~~~r~~~~~~~~~~~~~~~~~ 182 (182)
.+|+++|+++||+|++++++.++.|++|+
T Consensus 160 ~~d~~~f~~~ar~~~~~~~~~~~~~~~~~ 188 (190)
T 3o2u_A 160 CEGEKEFAEAVRLTMSGGSIEHVKYDNIV 188 (190)
T ss_dssp HTCHHHHHHHHHHHHBTCEETTEECCBCC
T ss_pred HHCHHHHHHHHHHHHHhcCCCCccccccc
Confidence 99999999999999999999999999986
No 2
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=5.4e-53 Score=327.05 Aligned_cols=176 Identities=59% Similarity=1.049 Sum_probs=161.9
Q ss_pred CcchhhHHHHHHHHHhhhcCCCCCCCCcHHHHHHHhh-hCCCCCCCceEEccCCCCCceEEEEEEeCCCCCCCCCEEEEE
Q 030162 1 MIKLFKVKEKQRENAENANGKTPVKKQSAGELRLHRG-SVIQPPSARFITFPNGKDDLMNFEVSIRPDEGYYVGGTFVFT 79 (182)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~RL~~E-~~l~~~~~~~~~~~~~~~n~~~w~~~igp~~tpy~gg~f~~~ 79 (182)
||+++++++|+++++++ +..+.+.+.+||++| +++++++++++.++. ++|+++|+++|||++|||+||+|+++
T Consensus 3 m~~~~~~~~~~~~~~~~-----~~~~~~~~~~RL~kEl~~l~~~~~i~~~~p~-~~nl~~W~~~igP~~tpYegg~f~~~ 76 (180)
T 2nvu_C 3 MIKLFSLKQQKKEEEKG-----SSKKASAAQLRIQKDINELNLPKTCDISFSD-PDDLLNFKLVICPDEGFYKSGKFVFS 76 (180)
T ss_dssp --CCCCCCCSCCCCCCS-----CCCSCCHHHHHHHHHHHTCCCCTTEEEECSS-TTCTTEEEEEECCCSGGGTTBCEEEE
T ss_pred hHHHHHHHHHHHhhhhc-----ccCCccHHHHHHHHHHHhcCCCCCeEEEecc-cccccceEEEECCCCCCCCCCEEEEE
Confidence 89999997666544322 246688999999999 999888899887666 78999999999999999999999999
Q ss_pred EEcCCCCCCCCCceeeecccccccccCCCceEcccccCccCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHhCHHH
Q 030162 80 FQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKL 159 (182)
Q Consensus 80 i~fp~~YP~~pP~v~f~t~i~HPnI~~~G~vc~~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~ 159 (182)
|.||++||++||+|+|.|+||||||+.+|.||+++|.++|+|++++.+||.+|+++|.+|++++|+|.+||.+|.+|+++
T Consensus 77 i~fp~~YP~~PP~v~F~t~i~HPNV~~~G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~d~~~ 156 (180)
T 2nvu_C 77 FKVGQGYPHDPPKVKCETMVYHPNIDLEGNVALNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRL 156 (180)
T ss_dssp EECCTTTTTSCCEEEECSCCCBTTBCTTSBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHH
T ss_pred EeCCCcCCCCCCcCceeccCccCCCCCCCcEEcccccccCCCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCcccccCC
Q 030162 160 FESNVRRAMAGGYVGQTFFIRCI 182 (182)
Q Consensus 160 f~~~~r~~~~~~~~~~~~~~~~~ 182 (182)
|+++||++++++++++..|++++
T Consensus 157 f~~~v~~~v~~~~~~~~~~~~~~ 179 (180)
T 2nvu_C 157 FEQNVQRSMRGGYIGSTYFERCL 179 (180)
T ss_dssp HHHHHHHHHHSEEETTEEECCCB
T ss_pred HHHHHHHHHhhCCcCccccchhc
Confidence 99999999999999999999985
No 3
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-49 Score=303.40 Aligned_cols=157 Identities=61% Similarity=1.097 Sum_probs=150.4
Q ss_pred CCCcHHHHHHHhh-hCCCCCCCceEEccCCCCCceEEEEEEeCCCCCCCCCEEEEEEEcCCCCCCCCCceeeeccccccc
Q 030162 25 KKQSAGELRLHRG-SVIQPPSARFITFPNGKDDLMNFEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPN 103 (182)
Q Consensus 25 ~~~s~~~~RL~~E-~~l~~~~~~~~~~~~~~~n~~~w~~~igp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 103 (182)
.+.+.+.+||++| +++++++++++.++. ++|+++|+++|||++|||+||+|+++|.||++||++||+|+|.|+|||||
T Consensus 2 ~~~~~~~~RL~kEl~~l~~~~~~~~~~~~-~~~l~~w~~~igp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 80 (160)
T 1y8x_A 2 SMASAAQLRIQKDINELNLPKTCDISFSD-PDDLLNFKLVICPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPN 80 (160)
T ss_dssp CSCCHHHHHHHHHHHTCCCCTTEEEECSS-TTCTTEEEEEECCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTT
T ss_pred CcccHHHHHHHHHHHhcCCCCCeEEEecc-CCccceEEEEECCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCc
Confidence 3467899999999 999888899887666 78999999999999999999999999999999999999999999999999
Q ss_pred ccCCCceEcccccCccCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHhcCCCCCcccccCC
Q 030162 104 IDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFIRCI 182 (182)
Q Consensus 104 I~~~G~vc~~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~~~~~~~~~~ 182 (182)
|+.+|.||+++|.++|+|++++.+||.+|++||.+|++++|+|.+||.+|++|+++|+++||++++++++++..|++++
T Consensus 81 v~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~Pn~~~p~n~~aa~~~~~~~~~f~~~v~~~v~~~~~~~~~~~~~~ 159 (160)
T 1y8x_A 81 IDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGYIGSTYFERCL 159 (160)
T ss_dssp BCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHSCHHHHHHHHHHHHHSEEETTEEECCCB
T ss_pred CCCCCeEEcccchhhccCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhhCccCCccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999985
No 4
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=1.2e-47 Score=289.74 Aligned_cols=145 Identities=36% Similarity=0.655 Sum_probs=138.4
Q ss_pred CcHHHHHHHhh-hCC--CCCCCceEEccCCCCCceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeeecccccc
Q 030162 27 QSAGELRLHRG-SVI--QPPSARFITFPNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHP 102 (182)
Q Consensus 27 ~s~~~~RL~~E-~~l--~~~~~~~~~~~~~~~n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 102 (182)
++.+.+||++| +++ +++.++++. +. ++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|+||||
T Consensus 2 a~~a~~RL~kEl~~l~~~~~~~i~~~-p~-~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 79 (151)
T 4gpr_A 2 AAMAMRRIQKELREIQQDPPCNCSAG-PV-GDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHP 79 (151)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEE-ES-SSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEE-Ec-CCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccc
Confidence 45789999999 999 678888885 66 68999999999 99999999999999999999999999999999999999
Q ss_pred cccCCCceEcccccCccCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHhcCCC
Q 030162 103 NIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYV 173 (182)
Q Consensus 103 nI~~~G~vc~~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~ 173 (182)
||+.+|+||+++|.++|+|++|+++||.+|+++|.+|++++|+|.+||.+|.+|+++|+++||+|+.+|+.
T Consensus 80 nv~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~ya~ 150 (151)
T 4gpr_A 80 NINKNGVICLDILKDQWSPALTLSRVLLSISSLLTDPNPSDPLDPEVANVLRANKKQFEDTAREWTRMYAR 150 (151)
T ss_dssp TBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHCCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred eECCCCEEEcccccCCCCCCCcHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999874
No 5
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=1.3e-47 Score=289.85 Aligned_cols=147 Identities=29% Similarity=0.631 Sum_probs=138.9
Q ss_pred CCcHHHHHHHhh-hCC--CCCCCceEEccCCCCCceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeeeccccc
Q 030162 26 KQSAGELRLHRG-SVI--QPPSARFITFPNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYH 101 (182)
Q Consensus 26 ~~s~~~~RL~~E-~~l--~~~~~~~~~~~~~~~n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 101 (182)
|++.+.+||++| +++ ++++|+++. +. ++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.|+|||
T Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~~i~~~-~~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 78 (152)
T 2aak_A 1 MSTPARKRLMRDFKRLQQDPPAGISGA-PQ-DNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFH 78 (152)
T ss_dssp CCCHHHHHHHHHHHHHHHSCCTTEEEE-EE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCC
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEE-eC-CCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCccc
Confidence 466899999999 999 667888874 55 78999999999 9999999999999999999999999999999999999
Q ss_pred ccccCCCceEcccccCccCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHhcCCCC
Q 030162 102 PNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVG 174 (182)
Q Consensus 102 PnI~~~G~vc~~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~~ 174 (182)
|||+.+|.||+++|.++|+|++++.+||.+|+++|.+|++++|+|.+||.+|.+|+++|+++||+|+++++..
T Consensus 79 Pnv~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~~ 151 (152)
T 2aak_A 79 PNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQSWTA 151 (152)
T ss_dssp TTBCTTSBBCCGGGTTSCCTTCCHHHHHHHHHHHHTSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCC-
T ss_pred CCCCCCCEEechhhcCCCCCCCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHCHHHHHHHHHHHHHHHccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998754
No 6
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1.3e-47 Score=294.28 Aligned_cols=147 Identities=27% Similarity=0.585 Sum_probs=138.8
Q ss_pred CCcHHHHHHHhh-hCC--CCCCCceEEccCCCCCceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeeeccccc
Q 030162 26 KQSAGELRLHRG-SVI--QPPSARFITFPNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYH 101 (182)
Q Consensus 26 ~~s~~~~RL~~E-~~l--~~~~~~~~~~~~~~~n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 101 (182)
|++.+.+||++| ++| ++++|+.+. +. ++|+++|+++| ||++|||+||+|++.|.||++||++||+|+|.|+|||
T Consensus 1 Ms~~a~~RL~kEl~~l~~~~~~gi~~~-p~-~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~H 78 (169)
T 1ayz_A 1 MSTPARRRLMRDFKRMKEDAPPGVSAS-PL-PDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFH 78 (169)
T ss_dssp -CCHHHHHHHHHHHHHHHSCCTTEEEE-EE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCC
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEE-ec-CCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCcc
Confidence 456889999999 999 678888885 56 78999999999 9999999999999999999999999999999999999
Q ss_pred ccccCCCceEcccccCccCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHhcCCCC
Q 030162 102 PNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVG 174 (182)
Q Consensus 102 PnI~~~G~vc~~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~~ 174 (182)
|||+.+|.||+++|.++|+|+++|.+||.+|++||.+|++++|+|.+||.+|++|+++|+++||+|+++++..
T Consensus 79 PNI~~~G~ICl~iL~~~WsP~~~i~~vL~si~~ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~~r~~~~~~a~~ 151 (169)
T 1ayz_A 79 PNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWED 151 (169)
T ss_dssp TTBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCeEeehhhccCCCCcCcHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHCHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999988754
No 7
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.2e-47 Score=291.74 Aligned_cols=148 Identities=27% Similarity=0.497 Sum_probs=140.1
Q ss_pred CCCCCcHHHHHHHhh-hCC--CCCCCceEEccCCCCCceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeeecc
Q 030162 23 PVKKQSAGELRLHRG-SVI--QPPSARFITFPNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTK 98 (182)
Q Consensus 23 ~~~~~s~~~~RL~~E-~~l--~~~~~~~~~~~~~~~n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~ 98 (182)
...++..+.+||++| +++ ++++++++. +. ++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.|+
T Consensus 7 ~~~~s~~~~~RL~kEl~~l~~~~~~gi~~~-~~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 84 (158)
T 1zdn_A 7 VENLPPHIIRLVYKEVTTLTADPPDGIKVF-PN-EEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTK 84 (158)
T ss_dssp -CCSCHHHHHHHHHHHHHHHHSCCTTEEEE-EC-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC
T ss_pred ccccCHHHHHHHHHHHHHHHhCCCCCEEEE-EC-CCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccC
Confidence 446788899999999 999 678888885 66 78999999999 9999999999999999999999999999999999
Q ss_pred cccccccCCCceEcccccCccCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHhcCC
Q 030162 99 VYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGY 172 (182)
Q Consensus 99 i~HPnI~~~G~vc~~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~ 172 (182)
||||||+.+|+||+++|.++|+|++++.+||.+|++||.+|++++|+|.+||.+|.+|+++|+++||+|+.+++
T Consensus 85 i~HPnv~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~a~~~t~~~A 158 (158)
T 1zdn_A 85 IFHPNVGANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTEIHG 158 (158)
T ss_dssp CCCTTBCTTSBBCHHHHTTTCCTTCCHHHHHHHHHHHHHSCCGGGCSSHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred cccCCCCCCCEEehhhcCCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998864
No 8
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.7e-48 Score=292.77 Aligned_cols=147 Identities=29% Similarity=0.541 Sum_probs=136.7
Q ss_pred CcHHHHHHHhh-hCC--CCCCCceEEccCCCCCceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeeecccccc
Q 030162 27 QSAGELRLHRG-SVI--QPPSARFITFPNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHP 102 (182)
Q Consensus 27 ~s~~~~RL~~E-~~l--~~~~~~~~~~~~~~~n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 102 (182)
+.++.+||++| +++ ++++++++. +. ++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.|+||||
T Consensus 3 s~~~~~RL~kEl~~l~~~~~~~i~~~-~~-~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 80 (154)
T 2c2v_B 3 SAGLPRRIIKETQRLLAEPVPGIKAE-PD-ESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHP 80 (154)
T ss_dssp SCSCCHHHHHHHHHHHHSCCTTEEEE-EC-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCT
T ss_pred cHHHHHHHHHHHHHHHhCCCCCEEEE-EC-CCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccC
Confidence 34567999999 999 678888885 66 67999999999 99999999999999999999999999999999999999
Q ss_pred cccCCCceEcccccCccCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHhcCCCCC
Q 030162 103 NIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQ 175 (182)
Q Consensus 103 nI~~~G~vc~~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~~~ 175 (182)
||+.+|.||+++|.++|+|+++|.+||.+|++||.+|++++|+|.+||.+|.+|+++|+++||+|+.+++...
T Consensus 81 nv~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~~a~~~ 153 (154)
T 2c2v_B 81 NVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAMNN 153 (154)
T ss_dssp TBCTTCBBCCHHHHTSCCTTCCHHHHHHHHHHHTTSCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred cCccCCeEEchhccCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999988653
No 9
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=3.2e-47 Score=291.29 Aligned_cols=145 Identities=30% Similarity=0.629 Sum_probs=137.2
Q ss_pred CCcHHHHHHHhh-hCC--CCCCCceEEccCCCCCceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeeeccccc
Q 030162 26 KQSAGELRLHRG-SVI--QPPSARFITFPNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYH 101 (182)
Q Consensus 26 ~~s~~~~RL~~E-~~l--~~~~~~~~~~~~~~~n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 101 (182)
..+.+.+||++| ++| ++++++++. +. ++|++.|+++| ||++|||+||+|+++|.||++||++||+|+|.|+|||
T Consensus 18 ~~~~~~~RL~kEl~~l~~~~~~gi~~~-~~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~H 95 (166)
T 2ayv_A 18 YFQGALKRINKELNDLSKDPPTNCSAG-PV-GDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYH 95 (166)
T ss_dssp -CTTHHHHHHHHHHHHHHSCCTTEEEE-EC-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCB
T ss_pred cCcHHHHHHHHHHHHHHhCCCCCEEEE-Ec-CCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcC
Confidence 456789999999 999 678888885 55 67999999999 9999999999999999999999999999999999999
Q ss_pred ccccCCCceEcccccCccCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHhcCC
Q 030162 102 PNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGY 172 (182)
Q Consensus 102 PnI~~~G~vc~~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~ 172 (182)
|||+.+|.||+++|.++|+|+++|.+||.+|++||.+|++++|+|.+||.+|.+|+++|+++||+|+++++
T Consensus 96 PNI~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pn~~~Pln~~aa~l~~~d~~~f~~~ar~~~~~~A 166 (166)
T 2ayv_A 96 PNINSQGAICLDILKDQWSPALTISKVLLSISSLLTDPNPDDPLVPEIAHLYKSDRMRYDQTAREWSQKYA 166 (166)
T ss_dssp TTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CcCCCCCeEEcccccccCCCCCcHHHHHHHHHHHHhCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998864
No 10
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=2.9e-47 Score=291.47 Aligned_cols=147 Identities=26% Similarity=0.532 Sum_probs=137.3
Q ss_pred CCcHHHHHHHhh-hCC--CCCCCceEEccCCCCCceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeeeccccc
Q 030162 26 KQSAGELRLHRG-SVI--QPPSARFITFPNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYH 101 (182)
Q Consensus 26 ~~s~~~~RL~~E-~~l--~~~~~~~~~~~~~~~n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 101 (182)
|++.+.+||++| ++| ++++++++. +..++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.|+|||
T Consensus 1 M~~~a~~RL~kEl~~l~~~~~~gi~~~-~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 79 (165)
T 2ucz_A 1 MSKTAQKRLLKELQQLIKDSPPGIVAG-PKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILH 79 (165)
T ss_dssp -CHHHHHHHHHHHHHHHHSCCTTEEEE-ESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSC
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEE-ECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCcc
Confidence 456899999999 999 678888885 55357999999999 9999999999999999999999999999999999999
Q ss_pred ccccCCCceEcccc-------------cCccCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHH
Q 030162 102 PNIDLEGNVCLNIL-------------REDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAM 168 (182)
Q Consensus 102 PnI~~~G~vc~~~l-------------~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~ 168 (182)
|||+.+|+||+++| .++|+|++||.+||.+|++||.+|++++|+|.+||.+|++|+++|+++||+|+
T Consensus 80 PNv~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~y~~~v~~~~ 159 (165)
T 2ucz_A 80 PNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESGANIDACILWRDNRPEFERQVKLSI 159 (165)
T ss_dssp TTBCTTSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHHSCCGGGCCCHHHHHHHHTTHHHHHHHHHHHH
T ss_pred CCCCCCCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHH
Confidence 99999999999999 67899999999999999999999999999999999999999999999999999
Q ss_pred hcCCC
Q 030162 169 AGGYV 173 (182)
Q Consensus 169 ~~~~~ 173 (182)
+++..
T Consensus 160 ~~~~~ 164 (165)
T 2ucz_A 160 LKSLG 164 (165)
T ss_dssp HHHTT
T ss_pred HHHhh
Confidence 88753
No 11
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=6.7e-47 Score=289.29 Aligned_cols=146 Identities=31% Similarity=0.643 Sum_probs=138.0
Q ss_pred CCCcHHHHHHHhh-hCC--CCCCCceEEccCCCCCceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeeecccc
Q 030162 25 KKQSAGELRLHRG-SVI--QPPSARFITFPNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVY 100 (182)
Q Consensus 25 ~~~s~~~~RL~~E-~~l--~~~~~~~~~~~~~~~n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 100 (182)
...+.+.+||++| +++ +.++++++. +. ++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.|+||
T Consensus 15 ~~~~~~~~RL~kEl~~l~~~~~~gi~~~-p~-~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~ 92 (165)
T 2c4o_A 15 PRGSMALKRIHKELNDLARDPPAQCSAG-PV-GDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIY 92 (165)
T ss_dssp -CCHHHHHHHHHHHHHHHSSCCTTEEEE-ES-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCC
T ss_pred cCCcHHHHHHHHHHHHHHhCCCCCEEEE-Ec-CCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCc
Confidence 3456789999999 999 667888885 56 68999999999 999999999999999999999999999999999999
Q ss_pred cccccCCCceEcccccCccCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHhcCC
Q 030162 101 HPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGY 172 (182)
Q Consensus 101 HPnI~~~G~vc~~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~ 172 (182)
||||+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||.+|.+|+++|+++||+|+.+++
T Consensus 93 HPnV~~~G~ICl~iL~~~W~P~~ti~~vL~si~~ll~~pn~~~P~n~~aa~~~~~d~~~y~~~ar~~~~~~a 164 (165)
T 2c4o_A 93 HPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYA 164 (165)
T ss_dssp BTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHTT
T ss_pred CCcCCCCCeEeehhhcCCCCCcCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999886
No 12
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=2.2e-47 Score=289.63 Aligned_cols=149 Identities=27% Similarity=0.518 Sum_probs=139.0
Q ss_pred CCCCCCcHHHHHHHhh-hCC--CCCCCceEEccCCCCCceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeeec
Q 030162 22 TPVKKQSAGELRLHRG-SVI--QPPSARFITFPNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKT 97 (182)
Q Consensus 22 ~~~~~~s~~~~RL~~E-~~l--~~~~~~~~~~~~~~~n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t 97 (182)
+.+.+++.+.+||++| +++ ++++++++. +. ++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.|
T Consensus 2 ~~~~~~~~~~~RL~kEl~~l~~~~~~~i~~~-p~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 79 (156)
T 2e2c_A 2 TTSKERHSVSKRLQQELRTLLMSGDPGITAF-PD-GDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTT 79 (156)
T ss_dssp CCCCSCCCHHHHHHHHHHHHHHHCCTTEEEE-ES-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESS
T ss_pred CccccchHHHHHHHHHHHHHHhCCCCCEEEE-EC-CCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeC
Confidence 3445677899999999 999 567888874 66 67999999999 999999999999999999999999999999999
Q ss_pred ccccccccCCCceEcccccCccCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHhcCCC
Q 030162 98 KVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYV 173 (182)
Q Consensus 98 ~i~HPnI~~~G~vc~~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~ 173 (182)
++|||||+.+|.||+++|.++|+|++++.+||.+|++||.+|++++|+|.+||.+| +|+++|+++||+|+++++.
T Consensus 80 ~i~HPnv~~~G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~pn~~~p~n~~aa~~~-~d~~~y~~~~~~~~~~~~~ 154 (156)
T 2e2c_A 80 PCWHPNVDQSGNICLDILKENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMW-SNQTEYKKVLHEKYKTAQS 154 (156)
T ss_dssp CCCBTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHTTSCCCSSCSCHHHHHHT-TCHHHHHHHHHHHHHHHHH
T ss_pred CcccCCCccCceEECccccccCCCCCcHHHHHHHHHHHHhCCCCCCHHHHHHHHHh-cCHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999 8999999999999988753
No 13
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=5.2e-47 Score=285.91 Aligned_cols=144 Identities=31% Similarity=0.630 Sum_probs=136.8
Q ss_pred CcHHHHHHHhh-hCC--CCCCCceEEccCCCCCceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeeecccccc
Q 030162 27 QSAGELRLHRG-SVI--QPPSARFITFPNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHP 102 (182)
Q Consensus 27 ~s~~~~RL~~E-~~l--~~~~~~~~~~~~~~~n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 102 (182)
+..+.+||++| +++ ++++++++. +. ++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.|+||||
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~~~~~~-~~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 79 (150)
T 1z2u_A 2 SHMALKRIQKELQDLGRDPPAQCSAG-PV-GDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHP 79 (150)
T ss_dssp CCHHHHHHHHHHHHHHHSCCSSEEEE-EE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEE-EC-CCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccC
Confidence 35688999999 999 677888885 55 58999999999 99999999999999999999999999999999999999
Q ss_pred cccCCCceEcccccCccCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHhcCC
Q 030162 103 NIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGY 172 (182)
Q Consensus 103 nI~~~G~vc~~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~ 172 (182)
||+.+|.||+++|.++|+|++++.+||.+|++||.+|++++|+|.+||.+|.+|+++|+++||+|+.+++
T Consensus 80 nv~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a 149 (150)
T 1z2u_A 80 NINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQKYA 149 (150)
T ss_dssp TBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred cCCCCCeEeeccccCCCCCCCCHHHHHHHHHHHhhCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999876
No 14
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=6.4e-47 Score=289.27 Aligned_cols=144 Identities=25% Similarity=0.527 Sum_probs=136.2
Q ss_pred cHHHHHHHhh-hCC--CCCCCceEEccCCCCCceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeeeccccccc
Q 030162 28 SAGELRLHRG-SVI--QPPSARFITFPNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPN 103 (182)
Q Consensus 28 s~~~~RL~~E-~~l--~~~~~~~~~~~~~~~n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 103 (182)
+.+.+||++| +++ ++++++++. +..++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.|+|||||
T Consensus 2 ~~a~~RL~kEl~~l~~~~~~gi~~~-~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPN 80 (164)
T 3h8k_A 2 GTALKRLMAEYKQLTLNPPEGIVAG-PMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPN 80 (164)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTEEEE-ESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTT
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEE-ECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCC
Confidence 5789999999 999 678888885 55356999999999 999999999999999999999999999999999999999
Q ss_pred ccCCCceEccccc-------------CccCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHhc
Q 030162 104 IDLEGNVCLNILR-------------EDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAG 170 (182)
Q Consensus 104 I~~~G~vc~~~l~-------------~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~ 170 (182)
|+.+|+||+++|. ++|+|++||++||.+|++||.+|++++|+|.+||.+|++|+++|+++||+|+++
T Consensus 81 V~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~ 160 (164)
T 3h8k_A 81 IYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQK 160 (164)
T ss_dssp BCTTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCCCCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHHHHHcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 9999999999997 789999999999999999999999999999999999999999999999999988
Q ss_pred CC
Q 030162 171 GY 172 (182)
Q Consensus 171 ~~ 172 (182)
+.
T Consensus 161 s~ 162 (164)
T 3h8k_A 161 SL 162 (164)
T ss_dssp HH
T ss_pred hh
Confidence 64
No 15
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.5e-46 Score=288.42 Aligned_cols=147 Identities=29% Similarity=0.544 Sum_probs=139.3
Q ss_pred CcHHHHHHHhh-hCC--CCCCCceEEccCCCCCceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeeecccccc
Q 030162 27 QSAGELRLHRG-SVI--QPPSARFITFPNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHP 102 (182)
Q Consensus 27 ~s~~~~RL~~E-~~l--~~~~~~~~~~~~~~~n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 102 (182)
++++.+||++| +++ ++++++++. +. ++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.|+||||
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~gi~~~-~~-~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 79 (169)
T 1yh2_A 2 SMQRASRLKRELHMLATEPPPGITCW-QD-KDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHP 79 (169)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEE-ES-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEE-eC-CCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccc
Confidence 45789999999 999 678888885 55 68999999999 99999999999999999999999999999999999999
Q ss_pred cccCCCceEccccc----CccCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHhcCCCCC
Q 030162 103 NIDLEGNVCLNILR----EDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQ 175 (182)
Q Consensus 103 nI~~~G~vc~~~l~----~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~~~ 175 (182)
||+.+|.||+++|. ++|+|++||.+||.+|++||.+|++++|+|.+||.+|.+|+++|.++||+|+.+++...
T Consensus 80 Nv~~~G~iCl~iL~~~~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~~ 156 (169)
T 1yh2_A 80 NIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEKHARQK 156 (169)
T ss_dssp TBCTTCBBCCGGGSCTTTSCCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCCC
T ss_pred cCCcCCeEecccccCCcccCCCCCCcHHHHHHHHHHHHhCCCCcchHhHHHHHHHHhhHHHHHHHHHHHHHHHcccc
Confidence 99999999999998 89999999999999999999999999999999999999999999999999999988654
No 16
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=1.5e-46 Score=286.74 Aligned_cols=148 Identities=30% Similarity=0.561 Sum_probs=136.3
Q ss_pred CCCcHHHHHHHhh-hCC--CCCCCceEEccCCC-C---CceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeee
Q 030162 25 KKQSAGELRLHRG-SVI--QPPSARFITFPNGK-D---DLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCK 96 (182)
Q Consensus 25 ~~~s~~~~RL~~E-~~l--~~~~~~~~~~~~~~-~---n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~ 96 (182)
+.+.+|.+||++| +++ ++++|+++. |..+ | |+++|+++| ||++|||+||+|+++|.||++||++||+|+|.
T Consensus 6 ~~~~~~~~RL~kEl~~l~~~~p~gi~~~-p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~ 84 (163)
T 3rcz_B 6 HHSSLCKTRLQEERKQWRRDHPFGFYAK-PCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFT 84 (163)
T ss_dssp ---CHHHHHHHHHHHHHHHSCCTTCEEE-EEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEES
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCEEEE-EccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEe
Confidence 4678999999999 999 778899885 4422 2 899999999 99999999999999999999999999999999
Q ss_pred cccccccccCCCceEcccccC--ccCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHhcCCC
Q 030162 97 TKVYHPNIDLEGNVCLNILRE--DWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYV 173 (182)
Q Consensus 97 t~i~HPnI~~~G~vc~~~l~~--~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~ 173 (182)
|+||||||+.+|+||+++|.. +|+|++||++||.+|++||.+|++++|+|.+||.+|.+|+++|+++||+|+++|+.
T Consensus 85 t~i~HPnV~~~G~iCl~iL~~~~~W~p~~ti~~vL~~i~~ll~~P~~~~p~n~~aa~~~~~d~~~y~~~~r~~~~~ya~ 163 (163)
T 3rcz_B 85 PPLFHPNVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQARENAP 163 (163)
T ss_dssp SCCCSTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC
T ss_pred CCCccCCCCCCCcEeccccCCCCCcCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhCc
Confidence 999999999999999999975 49999999999999999999999999999999999999999999999999999863
No 17
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=1e-46 Score=284.04 Aligned_cols=142 Identities=31% Similarity=0.599 Sum_probs=135.5
Q ss_pred HHHHHhh-hCC--CCCCCceEEccCCCCCceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeeecccccccccC
Q 030162 31 ELRLHRG-SVI--QPPSARFITFPNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDL 106 (182)
Q Consensus 31 ~~RL~~E-~~l--~~~~~~~~~~~~~~~n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnI~~ 106 (182)
.+||++| +++ ++++++++. +. ++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.|+||||||+.
T Consensus 3 ~~RL~kEl~~l~~~~~~~i~~~-~~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 80 (149)
T 2r0j_A 3 PRRITKETQNLANEPPPGIMAV-PV-PENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDK 80 (149)
T ss_dssp CHHHHHHHHHHHHSCCTTEEEE-EE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHHHhCCCCCEEEE-EC-CCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCC
Confidence 5899999 999 678888885 55 68999999999 999999999999999999999999999999999999999999
Q ss_pred CCceEcccccCccCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHhcCCCC
Q 030162 107 EGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVG 174 (182)
Q Consensus 107 ~G~vc~~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~~ 174 (182)
+|+||+++|.++|+|++|+.+||.+|++||.+|++++|+|.+||.+|.+|+++|+++||+|+++++..
T Consensus 81 ~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 148 (149)
T 2r0j_A 81 LGRICLDILKDKWSPALQIRTVLLSIQALLSSPEPDDPLDSKVAEHFKQDKNDAEHVARQWNKIYANN 148 (149)
T ss_dssp TCBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTTSCSSCHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEechhcCCCCCCCCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHHccC
Confidence 99999999999999999999999999999999999999999999999999999999999999998764
No 18
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=1.5e-46 Score=285.86 Aligned_cols=148 Identities=23% Similarity=0.475 Sum_probs=138.4
Q ss_pred CCCcHHHHHHHhh-hCCC-----CCCCceEEccCCCCCceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeeec
Q 030162 25 KKQSAGELRLHRG-SVIQ-----PPSARFITFPNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKT 97 (182)
Q Consensus 25 ~~~s~~~~RL~~E-~~l~-----~~~~~~~~~~~~~~n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t 97 (182)
.|++.+.+||++| ++|+ .+.++++. +. ++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.|
T Consensus 4 ~Ms~~a~~RL~kEl~~l~~~~~~~~~~i~~~-~~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 81 (159)
T 2bep_A 4 AMANIAVQRIKREFKEVLKSEETSKNQIKVD-LV-DENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFIT 81 (159)
T ss_dssp CCCHHHHHHHHHHHHHHHHCHHHHTTSEEEE-EC-SSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESS
T ss_pred cchHHHHHHHHHHHHHHHhcCCCCCCCEEEE-eC-CCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeC
Confidence 4667899999999 9993 36788885 55 57899999999 999999999999999999999999999999999
Q ss_pred ccccccccC-CCceEcccccCccCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHhcCCCC
Q 030162 98 KVYHPNIDL-EGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVG 174 (182)
Q Consensus 98 ~i~HPnI~~-~G~vc~~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~~ 174 (182)
+||||||+. +|.||+++|.++|+|++|+.+||.+|++||.+|++++|+|.+||.+|++|+++|+++||+|+.+++.+
T Consensus 82 ~i~HPni~~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 159 (159)
T 2bep_A 82 KIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 159 (159)
T ss_dssp CCCBTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred CCCccCCCCCCCEEeChhhhccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhhcC
Confidence 999999996 99999999999999999999999999999999999999999999999999999999999999998753
No 19
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=2.2e-46 Score=287.12 Aligned_cols=150 Identities=35% Similarity=0.678 Sum_probs=140.3
Q ss_pred CCCCCCcHHHHHHHhh-hCC--CCCCCceEEccCCCCCceEEEEEEeCCCCCCCCCEEEEEEEcCCCCCCCCCceeeecc
Q 030162 22 TPVKKQSAGELRLHRG-SVI--QPPSARFITFPNGKDDLMNFEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTK 98 (182)
Q Consensus 22 ~~~~~~s~~~~RL~~E-~~l--~~~~~~~~~~~~~~~n~~~w~~~igp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~ 98 (182)
++....+.+.+||++| ++| ++++++++..+. ++|++.|+++|||++|||+||+|+++|.||++||++||+|+|.|+
T Consensus 7 ~~~~~~s~~~~RL~kEl~~l~~~~~~gi~~~~~~-~~~l~~w~~~igp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~ 85 (167)
T 3fn1_B 7 DSTRRVSVRDKLLVKEVAELEANLPCTCKVHFPD-PNKLHCFQLTVTPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTK 85 (167)
T ss_dssp -CCCCCCHHHHHHHHHHHHHGGGSCTTEEEECSS-SSCTTEEEEEECCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSC
T ss_pred CCccchhHHHHHHHHHHHHHHhCCCCCEEEEeCC-CCcceeEEEEECCCCCccCCCEEEEEEECCCCCCCCCCeeEecCC
Confidence 5567889999999999 999 567888887444 689999999999999999999999999999999999999999999
Q ss_pred cccccccCCCceEcccccC------ccCCCCCHHHHHHHHHHhhcC-CCCCCcccHHHHHHHHhCHHHHHHHHHHHHhcC
Q 030162 99 VYHPNIDLEGNVCLNILRE------DWKPVLNINTIIYGLFHLFTQ-PNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGG 171 (182)
Q Consensus 99 i~HPnI~~~G~vc~~~l~~------~W~p~~~i~~iL~~i~~ll~~-p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~ 171 (182)
||||||+.+|.||+++|.. +|+|++||.+||.+|++||.+ |++++|+|.+||.+|.+|+++|+++||+|+.+|
T Consensus 86 i~HPnv~~~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~i~~ll~~~pn~~~p~n~eaa~~~~~~~~~f~~~~r~~~~~~ 165 (167)
T 3fn1_B 86 IWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVDDYIKRY 165 (167)
T ss_dssp CCCSSBCTTCCBCCGGGSBCSSSTTSBCTTCCHHHHHHHHHHTTTTTCCSSSCSCHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred cccCCCCCCCEEechhhccCCCCCCCCCCcCcHHHHHHHHHHHHcCCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHHh
Confidence 9999999999999999975 799999999999999999999 699999999999999999999999999999987
Q ss_pred C
Q 030162 172 Y 172 (182)
Q Consensus 172 ~ 172 (182)
+
T Consensus 166 A 166 (167)
T 3fn1_B 166 A 166 (167)
T ss_dssp C
T ss_pred c
Confidence 6
No 20
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.6e-46 Score=290.30 Aligned_cols=147 Identities=27% Similarity=0.505 Sum_probs=135.9
Q ss_pred CCcHHHHHHHhh-hCC--CCCCCceEEccCCCCCceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeeeccccc
Q 030162 26 KQSAGELRLHRG-SVI--QPPSARFITFPNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYH 101 (182)
Q Consensus 26 ~~s~~~~RL~~E-~~l--~~~~~~~~~~~~~~~n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 101 (182)
+++.+.+||++| ++| ++++++++. +. ++|+++|+++| ||++|||+||+|+|+|.||++||++||+|+|.|+|||
T Consensus 27 ~~~~~~~RL~kEl~~l~~~~~~gi~~~-p~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~H 104 (179)
T 1i7k_A 27 ARGPVGKRLQQELMTLMMSGDKGISAF-PE-SDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYH 104 (179)
T ss_dssp ---CHHHHHHHHHHHHHHHCCTTEEEE-EE-TTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCS
T ss_pred cChHHHHHHHHHHHHHHhCCCCCEEEE-Ec-CCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCcc
Confidence 677899999999 998 567888874 55 67999999999 9999999999999999999999999999999999999
Q ss_pred ccccCCCceEcccccCccCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHhcCCCCC
Q 030162 102 PNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQ 175 (182)
Q Consensus 102 PnI~~~G~vc~~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~~~ 175 (182)
|||+.+|+||+++|.++|+|+++|.+||.+|++||.+|++++|+|.+||.+| +|+++|.++|++++.++..+.
T Consensus 105 PNV~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~~aa~l~-~d~~~f~~~v~~~v~~~~~~~ 177 (179)
T 1i7k_A 105 PNVDTQGNISLDILKEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW-KNPTAFKKYLQETYSKQVTSQ 177 (179)
T ss_dssp TTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHT-TSHHHHHHHHHHHHHTTCC--
T ss_pred CccccCCeEEcccCcCcCCCCCCHHHHHHHHHHHHhCCCCcchhhHHHHHHh-hCHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999999999999999999999999 999999999999999987653
No 21
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=5.5e-47 Score=287.16 Aligned_cols=145 Identities=31% Similarity=0.547 Sum_probs=137.2
Q ss_pred cHHHHHHHhh-hCC--CCCCCceEEccCCCCCceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeeeccccccc
Q 030162 28 SAGELRLHRG-SVI--QPPSARFITFPNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPN 103 (182)
Q Consensus 28 s~~~~RL~~E-~~l--~~~~~~~~~~~~~~~n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 103 (182)
+.+.+||++| ++| ++++++++. +. ++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.|+|||||
T Consensus 4 ~~~~~RL~kE~~~l~~~~~~~i~~~-~~-~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 81 (155)
T 1jat_A 4 ASLPKRIIKETEKLVSDPVPGITAE-PH-DDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPN 81 (155)
T ss_dssp CSCCHHHHHHHHHHHHSCCTTEEEE-EE-TTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTT
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEE-EC-CCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCC
Confidence 3467999999 999 678888885 55 68999999999 999999999999999999999999999999999999999
Q ss_pred ccCCCceEcccccCccCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHhcCCCC
Q 030162 104 IDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVG 174 (182)
Q Consensus 104 I~~~G~vc~~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~~ 174 (182)
|+.+|.||+++|.++|+|++++.+||.+|++||.+|++++|+|.+||.+|++|+++|+++||+|+.+++..
T Consensus 82 v~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~r~~~~~~a~~ 152 (155)
T 1jat_A 82 IDRLGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLYAKK 152 (155)
T ss_dssp BCTTCCBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSTTCCTTHHHHHHCHHHHHHHHHHHHHHHSEE
T ss_pred CCCCCEEEchhhccCCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999998754
No 22
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=8.4e-47 Score=284.46 Aligned_cols=142 Identities=27% Similarity=0.498 Sum_probs=134.5
Q ss_pred HHHHHHhh-hCC--CCCCCceEEccCCCCCceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeeeccccccccc
Q 030162 30 GELRLHRG-SVI--QPPSARFITFPNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNID 105 (182)
Q Consensus 30 ~~~RL~~E-~~l--~~~~~~~~~~~~~~~n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnI~ 105 (182)
+.+||++| +++ ++++++++. +.+++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.|+||||||+
T Consensus 2 ~~~RL~~El~~l~~~~~~~i~~~-~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~ 80 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDPAAHITLE-FVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNIS 80 (149)
T ss_dssp CHHHHHHHHHHHHHCGGGCCEEE-ESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred hHHHHHHHHHHHHhCCCCCEEEE-ECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCc
Confidence 46899999 999 667888886 55345999999999 99999999999999999999999999999999999999999
Q ss_pred C-CCceEcccccCccCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHhcCC
Q 030162 106 L-EGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGY 172 (182)
Q Consensus 106 ~-~G~vc~~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~ 172 (182)
. +|.||+++|.++|+|++|+.+||.+|++||.+|++++|+|.+||.+|++|+++|.++||+|+.+++
T Consensus 81 ~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~a~~~~~~~a 148 (149)
T 1fxt_A 81 SVTGAICLDILKNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYA 148 (149)
T ss_dssp SSSCCBCCHHHHTSCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCSSHHHHHHHHHHHHHC
T ss_pred CCCCeEeCCcCCCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhc
Confidence 9 999999999999999999999999999999999999999999999999999999999999999876
No 23
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=3.1e-46 Score=283.60 Aligned_cols=146 Identities=27% Similarity=0.484 Sum_probs=135.5
Q ss_pred CCcHHHHHHHhh-hCC--CCCCCceEEccCC----CCCceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeeec
Q 030162 26 KQSAGELRLHRG-SVI--QPPSARFITFPNG----KDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKT 97 (182)
Q Consensus 26 ~~s~~~~RL~~E-~~l--~~~~~~~~~~~~~----~~n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t 97 (182)
|++.+.+||++| +++ ++++|+++. |.. ++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.|
T Consensus 1 Ms~~a~~RL~kE~~~l~~~~~~g~~~~-p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 79 (157)
T 2gjd_A 1 MSSLCLQRLQEERKKWRKDHPFGFYAK-PVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPA 79 (157)
T ss_dssp --CHHHHHHHHHHHHHHHCCCTTCEEE-EEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEE-eccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccC
Confidence 456789999999 999 778888885 331 24899999999 999999999999999999999999999999999
Q ss_pred ccccccccCCCceEcccccC--ccCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHhcCC
Q 030162 98 KVYHPNIDLEGNVCLNILRE--DWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGY 172 (182)
Q Consensus 98 ~i~HPnI~~~G~vc~~~l~~--~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~ 172 (182)
+||||||+.+|.||+++|.. +|+|+++|.+||.+|+++|.+|++++|+|.+|+.+|.+|+++|+++||+|+++++
T Consensus 80 ~i~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a 156 (157)
T 2gjd_A 80 GFYHPNVYPSGTICLSILNEDQDWRPAITLKQIVLGVQDLLDSPNPNSPAQEPAWRSFSRNKAEYDKKVLLQAKQYS 156 (157)
T ss_dssp TCCCTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTCCCCHHHHHHHHHCHHHHHHHHHHHHHHTB
T ss_pred CCccCCCCCCCcEeeecccCCCCCCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhc
Confidence 99999999999999999986 7999999999999999999999999999999999999999999999999999886
No 24
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=4.7e-46 Score=295.22 Aligned_cols=151 Identities=27% Similarity=0.485 Sum_probs=140.8
Q ss_pred CCCcHHHHHHHhh-hCC--CCCCCceEEccCCCCCceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeeecccc
Q 030162 25 KKQSAGELRLHRG-SVI--QPPSARFITFPNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVY 100 (182)
Q Consensus 25 ~~~s~~~~RL~~E-~~l--~~~~~~~~~~~~~~~n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 100 (182)
.+.+.+.+||++| ++| ++++++++. +. ++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.|+||
T Consensus 19 ~~~s~a~~RL~kEl~~l~~~~~~gi~~~-p~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~ 96 (216)
T 2pwq_A 19 FQGSKELLRLQKELKDIENENVQEIDAH-IK-DSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIW 96 (216)
T ss_dssp CCSCHHHHHHHHHHHHHHHSCTTTEEEE-EC-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred cccCHHHHHHHHHHHHHHhCCCCCEEEE-Ec-CCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCc
Confidence 3567899999999 999 667888885 55 67999999999 999999999999999999999999999999999999
Q ss_pred cccccC-CCceEcccccCccCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHhcCCCCCcc
Q 030162 101 HPNIDL-EGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTF 177 (182)
Q Consensus 101 HPnI~~-~G~vc~~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~~~~~ 177 (182)
||||+. +|.||+++|.++|+|++||.+||.+|++||.+|++++|+|.+||.+|.+|+++|.++||+|+.+++.....
T Consensus 97 HPNI~~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~dPln~eaa~~~~~d~~~f~~~ar~~t~~ya~~~~~ 174 (216)
T 2pwq_A 97 HPNISSQTGAICLDVLKNEWSPALTIRTALLSIQALLSDPQPDDPQDAEVAKMYKENHALFVKTASVWTKTFATGPKE 174 (216)
T ss_dssp BTTBCTTTCBBCCHHHHHHCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCCC--
T ss_pred CCCCcCCCCEEEchhhcccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcCCCcc
Confidence 999995 99999999999999999999999999999999999999999999999999999999999999999976553
No 25
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=7.7e-46 Score=282.48 Aligned_cols=148 Identities=30% Similarity=0.522 Sum_probs=137.7
Q ss_pred CCCcHHHHHHHhh-hCC--CCCCCceEEccC----CCCCceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeee
Q 030162 25 KKQSAGELRLHRG-SVI--QPPSARFITFPN----GKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCK 96 (182)
Q Consensus 25 ~~~s~~~~RL~~E-~~l--~~~~~~~~~~~~----~~~n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~ 96 (182)
.|++.+.+||++| ++| ++++|+.+. +. +++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.
T Consensus 3 ~M~~~a~~RL~kE~~~l~~~~~~g~~~~-p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 81 (161)
T 2grr_A 3 HMSGIALSRLAQERKAWRKDHPFGFVAV-PTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFE 81 (161)
T ss_dssp -CCHHHHHHHHHHHHHHHHSCCTTCEEE-EEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEES
T ss_pred cccHHHHHHHHHHHHHHHhCCCCCEEEE-eccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEe
Confidence 4677899999999 999 667888875 32 136899999999 99999999999999999999999999999999
Q ss_pred cccccccccCCCceEcccccC--ccCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHhcCCC
Q 030162 97 TKVYHPNIDLEGNVCLNILRE--DWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYV 173 (182)
Q Consensus 97 t~i~HPnI~~~G~vc~~~l~~--~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~ 173 (182)
|+||||||+.+|.||+++|.. +|+|++++.+||.+|++||.+|++++|+|.+|+.+|.+|+++|+++||+|+++++.
T Consensus 82 t~i~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~ 160 (161)
T 2grr_A 82 PPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQSPAQAEAYTIYCQNRVEYEKRVRAQAKKFAP 160 (161)
T ss_dssp SCCCSTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC
T ss_pred cCcccCCCCCCCeEeehhcCCCCCcCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHhc
Confidence 999999999999999999975 89999999999999999999999999999999999999999999999999999875
No 26
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=1.1e-45 Score=288.90 Aligned_cols=143 Identities=29% Similarity=0.571 Sum_probs=137.0
Q ss_pred cHHHHHHHhh-hCC--CCCCCceEEccCCCCCceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeeeccccccc
Q 030162 28 SAGELRLHRG-SVI--QPPSARFITFPNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPN 103 (182)
Q Consensus 28 s~~~~RL~~E-~~l--~~~~~~~~~~~~~~~n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 103 (182)
+.+.+||++| ++| ++++++++. +. ++|+++|+++| ||++|||+||+|+|.|.||++||++||+|+|.|+|||||
T Consensus 47 s~a~~RL~kEl~~l~~~~~~gi~~~-p~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPN 124 (194)
T 3bzh_A 47 STSAKRIQKELADITLDPPPNCSAG-PK-GDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCN 124 (194)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEE-ES-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTT
T ss_pred cHHHHHHHHHHHHHHhCCCCCceee-cc-cCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccce
Confidence 6789999999 998 668888885 66 68999999999 999999999999999999999999999999999999999
Q ss_pred ccCCCceEcccccCccCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHhcCC
Q 030162 104 IDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGY 172 (182)
Q Consensus 104 I~~~G~vc~~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~ 172 (182)
|+.+|.||+++|.++|+|+++|.+||.+|++||.+|++++|+|.+|+.+|.+|+++|+++||+|+.+|+
T Consensus 125 V~~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~~aa~l~~~d~~~f~~~ar~~t~~ya 193 (194)
T 3bzh_A 125 INSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 193 (194)
T ss_dssp BCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred ECCCCceechhhhccCCCcCcHHHHHHHHHHHHhCCCCccchhHHHHHHHHHCHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999999999999999998876
No 27
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=5.9e-46 Score=292.39 Aligned_cols=149 Identities=23% Similarity=0.479 Sum_probs=137.9
Q ss_pred CCcHHHHHHHhh-hCC-C----CCCCceEEccCCCCCceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeeecc
Q 030162 26 KQSAGELRLHRG-SVI-Q----PPSARFITFPNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTK 98 (182)
Q Consensus 26 ~~s~~~~RL~~E-~~l-~----~~~~~~~~~~~~~~n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~ 98 (182)
|++.+.+||++| ++| . .+.++++. +. ++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.|+
T Consensus 2 Ms~~a~~Rl~kEl~~l~~~~~~~~~~i~~~-~~-~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~ 79 (201)
T 3k9o_A 2 MANIAVQRIKREFKEVLKSEETSKNQIKVD-LV-DENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITK 79 (201)
T ss_dssp --CTTHHHHHHHHHHHHTCHHHHTTSEEEE-EC-STTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCEEEE-EC-CCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccC
Confidence 667889999999 999 2 25688885 56 67999999999 9999999999999999999999999999999999
Q ss_pred cccccccC-CCceEcccccCccCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHhcCCCCCc
Q 030162 99 VYHPNIDL-EGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQT 176 (182)
Q Consensus 99 i~HPnI~~-~G~vc~~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~~~~ 176 (182)
||||||+. +|.||+++|.++|+|++||.+||.+|+++|.+|++++|+|.+||.+|.+|+++|.++||+|+.+|+.+..
T Consensus 80 i~HPnv~~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~p~p~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~~~ 158 (201)
T 3k9o_A 80 IWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGAPV 158 (201)
T ss_dssp CCBTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCC
T ss_pred cccCCCcCCCCeeeCcccccCCCCCCCHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccccc
Confidence 99999996 9999999999999999999999999999999999999999999999999999999999999999887654
No 28
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=7.4e-46 Score=289.62 Aligned_cols=147 Identities=27% Similarity=0.464 Sum_probs=133.0
Q ss_pred CCCcHHHHHHHhh-hCC--CCC-------------CCceEEccCCCCCceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCC
Q 030162 25 KKQSAGELRLHRG-SVI--QPP-------------SARFITFPNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYP 87 (182)
Q Consensus 25 ~~~s~~~~RL~~E-~~l--~~~-------------~~~~~~~~~~~~n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP 87 (182)
...+.+.+||++| ++| +++ .++++. +. ++|+++|+++| ||++|||+||+|+++|.||++||
T Consensus 28 ~~~~~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~-~~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP 105 (193)
T 2f4z_A 28 RGTPREQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQ-IV-GGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYP 105 (193)
T ss_dssp ----CHHHHHHHHHHHHHHC----------------CEEEE-EE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTT
T ss_pred CCCCHHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEE-Ec-CCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCC
Confidence 4456788999999 999 443 577775 45 57899999999 99999999999999999999999
Q ss_pred CCCCceeeecccccccccC-CCceEcccccCccCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHhCHHHHHHHHHH
Q 030162 88 HEAPKVKCKTKVYHPNIDL-EGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRR 166 (182)
Q Consensus 88 ~~pP~v~f~t~i~HPnI~~-~G~vc~~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~ 166 (182)
++||+|+|.|+||||||+. +|.||+++|.++|+|+++|.+||.+|++||.+|++++|+|.+||.+|.+|+++|+++||+
T Consensus 106 ~~PP~V~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pnp~~P~n~~aa~l~~~d~~~f~~~ar~ 185 (193)
T 2f4z_A 106 YNPPKMKFVTKIWHPNISSQTGAICLDILKHEWSPALTIRTALLSIQAMLADPVPTDPQDAEVAKMMIENHPLFVQTAKL 185 (193)
T ss_dssp TSCCEEEESSCCCBTTBCTTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHH
T ss_pred CCCCeEEEecCCccCCCcCCCCEEECccccccCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHH
Confidence 9999999999999999995 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCC
Q 030162 167 AMAGGYV 173 (182)
Q Consensus 167 ~~~~~~~ 173 (182)
|+.+++.
T Consensus 186 ~t~~ya~ 192 (193)
T 2f4z_A 186 WTETFAK 192 (193)
T ss_dssp HHHHHCC
T ss_pred HHHHHcc
Confidence 9998874
No 29
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=7.8e-46 Score=284.24 Aligned_cols=146 Identities=26% Similarity=0.454 Sum_probs=136.4
Q ss_pred CCCCCCcHHHHHHHhh-hCC--CCCCCceEEccCCCCCceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeeec
Q 030162 22 TPVKKQSAGELRLHRG-SVI--QPPSARFITFPNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKT 97 (182)
Q Consensus 22 ~~~~~~s~~~~RL~~E-~~l--~~~~~~~~~~~~~~~n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t 97 (182)
-..+|++.+.+||++| ++| ++++++++. +. ++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.|
T Consensus 16 ~~~~M~~~a~~RL~kEl~~l~~~~~~gi~~~-p~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T 93 (169)
T 1yrv_A 16 PRGSMHGRAYLLLHRDFCDLKENNYKGITAK-PV-SEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFIT 93 (169)
T ss_dssp CTTGGGCHHHHHHHHHHHHHHHHCCTTEEEE-EC-STTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESS
T ss_pred ccCccChHHHHHHHHHHHHHHhCCCCCEEEE-Ec-CCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecC
Confidence 3456888999999999 999 667888874 66 68999999999 999999999999999999999999999999999
Q ss_pred ccccccc-cCCCceEccccc--CccCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHhc
Q 030162 98 KVYHPNI-DLEGNVCLNILR--EDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAG 170 (182)
Q Consensus 98 ~i~HPnI-~~~G~vc~~~l~--~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~ 170 (182)
+|||||| +.+|.||+++|. ++|+|+++|++||.+|++||.+|++++|+|.+||.+|++|+++|+++ |+++++
T Consensus 94 ~i~HPNI~~~~G~ICL~iL~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~eaa~l~~~d~~~y~~~-~~~v~~ 168 (169)
T 1yrv_A 94 IPFHPNVDPHTGQPCIDFLDNPEKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARILVKDESLYRTI-LRLFNR 168 (169)
T ss_dssp CCCCTTBCTTTCCBCCHHHHCGGGCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHSCHHHHHHH-HHHHC-
T ss_pred CCccCcccCCCCeEeehhhcCCcCCCCcCCHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHH-HHHhhC
Confidence 9999999 679999999998 89999999999999999999999999999999999999999999998 998864
No 30
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=2e-45 Score=285.41 Aligned_cols=145 Identities=30% Similarity=0.576 Sum_probs=135.8
Q ss_pred CcHHHHHHHhh-hCC--CCCCCceEEccCCCCCceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeeecccccc
Q 030162 27 QSAGELRLHRG-SVI--QPPSARFITFPNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHP 102 (182)
Q Consensus 27 ~s~~~~RL~~E-~~l--~~~~~~~~~~~~~~~n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 102 (182)
++++.+||++| ++| ++++|+++..+. ++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.|++|||
T Consensus 5 ~~~a~kRL~kEl~~l~~~~~~gi~~~~~~-~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 83 (183)
T 3rz3_A 5 SPSSQKALLLELKGLQEEPVEGFRVTLVD-EGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHP 83 (183)
T ss_dssp CCHHHHHHHHHHHHHHHSCCTTEEEEECT-TCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCCT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEecC-ccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCccC
Confidence 46789999999 999 678888886455 78999999999 99999999999999999999999999999999999999
Q ss_pred cccCCCceEccccc-------------CccCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHh------CHHHHHHH
Q 030162 103 NIDLEGNVCLNILR-------------EDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRD------NPKLFESN 163 (182)
Q Consensus 103 nI~~~G~vc~~~l~-------------~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~a~~~~~~------~~~~f~~~ 163 (182)
||+.+|+||+++|. ++|+|++||++||.+|++||.+|++++|+|.+|+.+|++ |+++|+++
T Consensus 84 nV~~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~~~~~~~y~~~ 163 (183)
T 3rz3_A 84 NIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTDI 163 (183)
T ss_dssp TBCTTSBBCCTTC--------------CCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHHHHTTTCCCHHHHH
T ss_pred CCCCCCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHhcccccccHHHHHHH
Confidence 99999999999996 789999999999999999999999999999999999999 78999999
Q ss_pred HHHHHhcCC
Q 030162 164 VRRAMAGGY 172 (182)
Q Consensus 164 ~r~~~~~~~ 172 (182)
||+++.++.
T Consensus 164 v~~~v~~s~ 172 (183)
T 3rz3_A 164 IRKQVLGTK 172 (183)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999988754
No 31
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=7.3e-46 Score=293.90 Aligned_cols=147 Identities=27% Similarity=0.487 Sum_probs=137.6
Q ss_pred HHHHHHHhh-hCC--CCCCCceEEccCCCCCceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeeecccccccc
Q 030162 29 AGELRLHRG-SVI--QPPSARFITFPNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNI 104 (182)
Q Consensus 29 ~~~~RL~~E-~~l--~~~~~~~~~~~~~~~n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnI 104 (182)
++.+||++| +++ ++++++++. +..++++++|+++| ||++|||+||+|+++|.||++||++||+|+|.|+||||||
T Consensus 2 ~a~~RL~kEl~~l~~~~~~gi~~~-p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI 80 (215)
T 1tte_A 2 SRAKRIMKEIQAVKDDPAAHITLE-FVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNI 80 (215)
T ss_dssp TTHHHHHHHHHHHHTTTCTTCEEC-CCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSS
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEE-ECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcC
Confidence 468999999 999 667888885 55345677999999 9999999999999999999999999999999999999999
Q ss_pred cC-CCceEcccccCccCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHhcCCCCCc
Q 030162 105 DL-EGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQT 176 (182)
Q Consensus 105 ~~-~G~vc~~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~~~~ 176 (182)
+. +|.||+++|.++|+|++|+.+||.+|++||.+|++++|+|.+||.+|.+|+++|.++||+|+.+++....
T Consensus 81 ~~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~~Pln~eaa~~~~~d~~~f~~~ar~~t~~yA~~~~ 153 (215)
T 1tte_A 81 SSVTGAICLDILRNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYASETS 153 (215)
T ss_dssp CSSSSCCCSSTTTCCSCTTCCHHHHHHHHHHHHTSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHSSCCCS
T ss_pred cCCCCEEECccCCCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhccCCC
Confidence 99 9999999999999999999999999999999999999999999999999999999999999999986643
No 32
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=1e-45 Score=284.51 Aligned_cols=143 Identities=31% Similarity=0.582 Sum_probs=106.9
Q ss_pred CCCCcHHHHHHHhh-hCC--CCCCCceEEccCCCCCceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeeeccc
Q 030162 24 VKKQSAGELRLHRG-SVI--QPPSARFITFPNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKV 99 (182)
Q Consensus 24 ~~~~s~~~~RL~~E-~~l--~~~~~~~~~~~~~~~n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i 99 (182)
...++.+.+||++| ++| ++++++++. +..++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.|+|
T Consensus 12 ~~~~~~~~~rL~kEl~~l~~~~~~gi~~~-p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i 90 (172)
T 2awf_A 12 SGLVPRGSLLLRRQLAELNKNPVEGFSAG-LIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEI 90 (172)
T ss_dssp -CCCCTTHHHHHHHHHHHHHSCCTTEEEE-ESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCC
T ss_pred CCChHHHHHHHHHHHHHHHhCCCCCEEEE-ECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCC
Confidence 35778899999999 999 678888886 44357999999999 99999999999999999999999999999999999
Q ss_pred ccccccCCCceEccccc-------------CccCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHhCHH-HHHHHHH
Q 030162 100 YHPNIDLEGNVCLNILR-------------EDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPK-LFESNVR 165 (182)
Q Consensus 100 ~HPnI~~~G~vc~~~l~-------------~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~a~~~~~~~~~-~f~~~~r 165 (182)
|||||+.+|+||+++|. ++|+|+++|++||.+|++||.+|++++|+|.+||.+|++|++ +|+++||
T Consensus 91 ~HPNV~~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~p~n~~aa~~~~~d~~~~f~~~vr 170 (172)
T 2awf_A 91 WHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVA 170 (172)
T ss_dssp CCTTBCTTCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHHHHHSCC---------------------------
T ss_pred ccCCCCCCCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHHHHHHCcCCCCccCHHHHHHHHHCcHHHHHHHHH
Confidence 99999999999999996 689999999999999999999999999999999999999999 9999999
Q ss_pred HH
Q 030162 166 RA 167 (182)
Q Consensus 166 ~~ 167 (182)
+|
T Consensus 171 ~~ 172 (172)
T 2awf_A 171 RC 172 (172)
T ss_dssp --
T ss_pred hC
Confidence 86
No 33
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=2.7e-45 Score=277.91 Aligned_cols=145 Identities=28% Similarity=0.540 Sum_probs=136.4
Q ss_pred HHHHHHHhh-hCC--CCCCCceEEccCCCCCceEEEEEEeCCCCCCCCCEEEEEEEcCCCCCCCCCceeeeccccccccc
Q 030162 29 AGELRLHRG-SVI--QPPSARFITFPNGKDDLMNFEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNID 105 (182)
Q Consensus 29 ~~~~RL~~E-~~l--~~~~~~~~~~~~~~~n~~~w~~~igp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnI~ 105 (182)
.+.+||++| +++ ++++++.+..+. ++|+++|+++|.|++|||+||+|+++|.||++||++||+|+|.|++|||||+
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~i~~~~~~-~~~l~~w~~~I~P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~ 82 (155)
T 1wzv_A 4 MASMRVVKELEDLQKKPPPYLRNLSSD-DANVLVWHALLLPDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVD 82 (155)
T ss_dssp -CHHHHHHHHHHHHHSCCTTEEEEEEC-SSCTTEEEEEECCCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEecC-CCchheEEEEEcCCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcCC
Confidence 468999999 999 667888874455 7899999999999999999999999999999999999999999999999999
Q ss_pred CCCceEcccc-cCccCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHhcCCCC
Q 030162 106 LEGNVCLNIL-REDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVG 174 (182)
Q Consensus 106 ~~G~vc~~~l-~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~~ 174 (182)
.+|.||+++| .++|+|++++.+||.+|+++|.+|++++|+|.+||.+|.+|+++|+++||+|+.+++..
T Consensus 83 ~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~ 152 (155)
T 1wzv_A 83 ENGQICLPIISSENWKPCTKTCQVLEALNVLVNRPNIREPLRMDLADLLTQNPELFRKNAEEFTLRFGVD 152 (155)
T ss_dssp TTCBCCCGGGCTTTCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCEE
T ss_pred CCCeEeecCCCccCCCCCCcHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999 89999999999999999999999999999999999999999999999999999998754
No 34
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=3.4e-45 Score=296.13 Aligned_cols=153 Identities=22% Similarity=0.453 Sum_probs=142.0
Q ss_pred CCCCcHHHHHHHhh-hCC--C---CCCCceEEccCCCCCceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeee
Q 030162 24 VKKQSAGELRLHRG-SVI--Q---PPSARFITFPNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCK 96 (182)
Q Consensus 24 ~~~~s~~~~RL~~E-~~l--~---~~~~~~~~~~~~~~n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~ 96 (182)
..|++.+.+||++| ++| + .+.++++. +. ++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.
T Consensus 52 ~~Ms~~a~~RL~kEl~~l~~~~~~~~~gi~v~-p~-~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~ 129 (253)
T 3e46_A 52 FDMANIAVQRIKREFKEVLKSEETSKNQIKVD-LV-DENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFI 129 (253)
T ss_dssp CCCCHHHHHHHHHHHHHHHHCHHHHTTSEEEE-EC-STTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEES
T ss_pred ccccHHHHHHHHHHHHHHHhCCCCCCCCEEEE-EC-CCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeec
Confidence 34678899999999 999 2 35788885 56 67999999999 99999999999999999999999999999999
Q ss_pred cccccccccC-CCceEcccccCccCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHhcCCCCC
Q 030162 97 TKVYHPNIDL-EGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQ 175 (182)
Q Consensus 97 t~i~HPnI~~-~G~vc~~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~~~ 175 (182)
|+||||||+. +|.||+++|.++|+|+++|++||.+|++||.+|++++|+|.+||.+|.+|+++|.++||+|+.+|+.+.
T Consensus 130 T~i~HPNV~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~eaa~l~~~d~~~f~~~ar~~t~~yA~~~ 209 (253)
T 3e46_A 130 TKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGAP 209 (253)
T ss_dssp SCCCBTTBCTTTCBBCCGGGTTCCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCCS
T ss_pred CCCccCCccCCCCeeecccccCCCCCCCCHHHHHHHHHHHhcCCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHhcccc
Confidence 9999999996 999999999999999999999999999999999999999999999999999999999999999988776
Q ss_pred ccc
Q 030162 176 TFF 178 (182)
Q Consensus 176 ~~~ 178 (182)
...
T Consensus 210 ~~~ 212 (253)
T 3e46_A 210 VSS 212 (253)
T ss_dssp CCC
T ss_pred cCc
Confidence 543
No 35
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=6.4e-45 Score=275.56 Aligned_cols=146 Identities=29% Similarity=0.467 Sum_probs=131.9
Q ss_pred HHHHHHHhh-hCC--CCCCCceEEccCCCCCceEEEEEEeCCCCCCCCCEEEEEEEcCCCCCCCCCceeeeccccccccc
Q 030162 29 AGELRLHRG-SVI--QPPSARFITFPNGKDDLMNFEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNID 105 (182)
Q Consensus 29 ~~~~RL~~E-~~l--~~~~~~~~~~~~~~~n~~~w~~~igp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnI~ 105 (182)
.+.+||++| +++ ++++++.+. +..++|+++|+++|+|++|||+||+|+++|.||++||++||+|+|.|++|||||+
T Consensus 2 ~a~~RL~kEl~~l~~~~~~~~~~~-~~~~~~l~~w~~~i~P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 80 (154)
T 1c4z_D 2 AASRRLMKELEEIRKCGMKNFRNI-QVDEANLLTWQGLIVPDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNID 80 (154)
T ss_dssp --CTTHHHHHTTCSSSCCSSCEEE-CSSCSSSSEEEEEECCCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBC
T ss_pred cHHHHHHHHHHHHHhCCCCCEEEe-eCCCCchheEEEEEeCCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCC
Confidence 356899999 999 456677653 4337899999999999999999999999999999999999999999999999999
Q ss_pred CCCceEccccc-CccCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHhcCCCCC
Q 030162 106 LEGNVCLNILR-EDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQ 175 (182)
Q Consensus 106 ~~G~vc~~~l~-~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~~~ 175 (182)
.+|.||+++|. ++|+|++|+.+||.+|++||.+|++++|+|.+||.+|.+|+++|+++||+|+.+++...
T Consensus 81 ~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~~ 151 (154)
T 1c4z_D 81 EKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGEKR 151 (154)
T ss_dssp TTCBBCCTTTSSSSCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHTCSSTTHHHHHHHHTTC----
T ss_pred CCCEEECCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHhHHHHHHHHHHHHHHhcccC
Confidence 99999999996 89999999999999999999999999999999999999999999999999999998654
No 36
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=9.5e-46 Score=279.48 Aligned_cols=145 Identities=25% Similarity=0.466 Sum_probs=133.7
Q ss_pred HHHHHHHhh-hCCCCCCCceEEccCCCCCceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeeecccccccccC
Q 030162 29 AGELRLHRG-SVIQPPSARFITFPNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDL 106 (182)
Q Consensus 29 ~~~~RL~~E-~~l~~~~~~~~~~~~~~~n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnI~~ 106 (182)
++.+||++| +++.. .++++. +. ++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.|+||||||+.
T Consensus 2 sa~~Rl~kEl~~l~~-~~~~v~-~~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~ 78 (152)
T 2onu_A 2 TSLTRKQCDFTKLIM-AGYDLE-LN-NGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVDE 78 (152)
T ss_dssp -CCCHHHHTHHHHHH-HTCCEE-EE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCT
T ss_pred hHHHHHHHHHHhcCc-CCCEEE-Ec-cCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCcC
Confidence 456899999 98843 477775 55 68999999999 999999999999999999999999999999999999999996
Q ss_pred -CCceEcccccCccCCCCCHHHHHHH-HHHhhcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHhcCCCCCc
Q 030162 107 -EGNVCLNILREDWKPVLNINTIIYG-LFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQT 176 (182)
Q Consensus 107 -~G~vc~~~l~~~W~p~~~i~~iL~~-i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~~~~ 176 (182)
+|.||+++|.++|+|++++.+||.+ |++||.+|++++|+|.+||.+|.+|+++|+++||+|+.+++....
T Consensus 79 ~~G~iCl~il~~~W~p~~~i~~vl~~ii~~Ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~v~~~~~~~a~~~~ 150 (152)
T 2onu_A 79 ASGSVCLDVINQTWTPLYSLVNVFEVFLPQLLTYPNPSDPLNSDAASLLMKDKNIYEEKVKEYVKLYASKDL 150 (152)
T ss_dssp TTCBBCHHHHHHHCCTTCCHHHHHHTHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHSCGGG
T ss_pred cCCeEecccccccCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccCcc
Confidence 9999999999999999999999999 689999999999999999999999999999999999999887543
No 37
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=7.8e-45 Score=279.59 Aligned_cols=149 Identities=23% Similarity=0.437 Sum_probs=133.8
Q ss_pred CCCcHHHHHHHhh-hCCCC----C-----CC---ceEEccCCCCCceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCC
Q 030162 25 KKQSAGELRLHRG-SVIQP----P-----SA---RFITFPNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEA 90 (182)
Q Consensus 25 ~~~s~~~~RL~~E-~~l~~----~-----~~---~~~~~~~~~~n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~p 90 (182)
+|++.+.+||++| ++|+. + +. +....+..++|+++|+++| ||++|||+||+|+++|.||++||++|
T Consensus 2 ~Ms~~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~P 81 (172)
T 2y9m_A 2 AMADTCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNP 81 (172)
T ss_dssp --CHHHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSC
T ss_pred CCcHHHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCC
Confidence 4778899999999 99832 2 33 2222463378999999999 99999999999999999999999999
Q ss_pred Cceeeec-cccccccc-CCCceEccccc-CccCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHh-CHHHHHHHHHH
Q 030162 91 PKVKCKT-KVYHPNID-LEGNVCLNILR-EDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRD-NPKLFESNVRR 166 (182)
Q Consensus 91 P~v~f~t-~i~HPnI~-~~G~vc~~~l~-~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~a~~~~~~-~~~~f~~~~r~ 166 (182)
|+|+|.| +||||||+ .+|.||+++|. ++|+|++|+.+||.+|++||.+|++++|+|.+||.+|.+ |+++|+++||+
T Consensus 82 P~v~f~t~~i~HPni~~~~G~iCl~iL~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~d~~~f~~~~~~ 161 (172)
T 2y9m_A 82 PKISFMQNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCVHAVWRLLREPVCDSPLDVDIGNIIRCGDMSAYQGIVKY 161 (172)
T ss_dssp CEEEECTTSCCCTTEETTTTEECCGGGSTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHTTTCHHHHHHHHHH
T ss_pred CEEEEeeCCeecCCCcCCCCEEeccccCCCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhCCHHHHHHHHHH
Confidence 9999999 99999997 69999999998 899999999999999999999999999999999999999 99999999999
Q ss_pred HHhcCCC
Q 030162 167 AMAGGYV 173 (182)
Q Consensus 167 ~~~~~~~ 173 (182)
|+++++.
T Consensus 162 ~~~~~~~ 168 (172)
T 2y9m_A 162 FLAERER 168 (172)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9998764
No 38
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=1e-44 Score=280.04 Aligned_cols=143 Identities=27% Similarity=0.517 Sum_probs=134.2
Q ss_pred cHHHHHHHhh-hCCCCCCCceEEccCCCCCceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeeeccccccccc
Q 030162 28 SAGELRLHRG-SVIQPPSARFITFPNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNID 105 (182)
Q Consensus 28 s~~~~RL~~E-~~l~~~~~~~~~~~~~~~n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnI~ 105 (182)
+++.+||++| +++. ++++++. +. +|++.|+++| ||++|||+||+|+++|.||++||++||+|+|.|+||||||+
T Consensus 24 ~~a~~RL~kEl~~l~-~~g~~v~-~~--ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV~ 99 (179)
T 2z5d_A 24 SPGKRRMDTDVIKLI-ESKHEVT-IL--GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNID 99 (179)
T ss_dssp CHHHHHHHHHHHHHH-HSSSCEE-EE--EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBC
T ss_pred hHHHHHHHHHHHhcC-cCCCEEE-EC--CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCcCC
Confidence 3689999999 9985 3578775 33 5689999999 99999999999999999999999999999999999999999
Q ss_pred C-CCceEcccccCccCCCCCHHHHHHH-HHHhhcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHhcCCCC
Q 030162 106 L-EGNVCLNILREDWKPVLNINTIIYG-LFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVG 174 (182)
Q Consensus 106 ~-~G~vc~~~l~~~W~p~~~i~~iL~~-i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~~ 174 (182)
. +|.||+++|.++|+|++++.+||.+ |++||.+|++++|+|.+||.+|++|+++|+++||+|+++++..
T Consensus 100 ~~~G~ICL~iL~~~WsP~~ti~~iL~s~I~~Ll~~Pn~~~p~n~eaa~~~~~d~~~y~~~vr~~~~~~a~~ 170 (179)
T 2z5d_A 100 EASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYATE 170 (179)
T ss_dssp TTTCBBCHHHHHHHCCTTCCTTHHHHTHHHHHHHSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSSH
T ss_pred CCCCeEeccccccCCCCCCCHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHccc
Confidence 9 9999999999999999999999999 9999999999999999999999999999999999999998864
No 39
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=1.9e-44 Score=276.97 Aligned_cols=142 Identities=25% Similarity=0.480 Sum_probs=130.0
Q ss_pred HHHHHHHhh-hCCCCCCCceEEccCCCCCceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeeecccccccccC
Q 030162 29 AGELRLHRG-SVIQPPSARFITFPNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDL 106 (182)
Q Consensus 29 ~~~~RL~~E-~~l~~~~~~~~~~~~~~~n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnI~~ 106 (182)
++.+||++| +++...+ +.+ +. ++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.|+||||||+.
T Consensus 12 ~~~~RL~~El~~l~~~~-~~v--~~-~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~ 87 (171)
T 1yf9_A 12 RSNRRREMDYMRLCNST-RKV--YP-SDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDE 87 (171)
T ss_dssp -CCHHHHHHHHHHHSSS-SCE--EE-CSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCT
T ss_pred cHHHHHHHHHHHHHhCC-CCC--CC-CCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCcc
Confidence 567999999 9983222 334 34 67999999999 999999999999999999999999999999999999999995
Q ss_pred -CCceEcccccCccCCCCCHHHHHHHH-HHhhcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHhcCCCC
Q 030162 107 -EGNVCLNILREDWKPVLNINTIIYGL-FHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVG 174 (182)
Q Consensus 107 -~G~vc~~~l~~~W~p~~~i~~iL~~i-~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~~ 174 (182)
+|.||+++|.++|+|++++++||.+| ++||.+|++++|+|.+||.+|.+|+++|.++||+|+.+++..
T Consensus 88 ~~G~iCl~iL~~~W~p~~~i~~vL~sil~~ll~~Pn~~~p~n~~aa~~~~~d~~~y~~~vr~~~~~~a~~ 157 (171)
T 1yf9_A 88 RSGSVCLDVINQTWTPMYQLENIFDVFLPQLLRYPNPSDPLNVQAAHLLHADRVGFDALLREHVSTHATP 157 (171)
T ss_dssp TTCBBCHHHHHHHCCTTCCTHHHHHTHHHHHHHSCCSSCCSCHHHHHHHHHCHHHHHHHHHHHHHHHCCH
T ss_pred cCCeEeccccccCCCCCCcHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcCh
Confidence 99999999999999999999999997 799999999999999999999999999999999999998753
No 40
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=2e-43 Score=303.17 Aligned_cols=151 Identities=29% Similarity=0.609 Sum_probs=143.8
Q ss_pred cHHHHHHHhh-hCC--CCCCCceEEccCCCCCceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeeeccccccc
Q 030162 28 SAGELRLHRG-SVI--QPPSARFITFPNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPN 103 (182)
Q Consensus 28 s~~~~RL~~E-~~l--~~~~~~~~~~~~~~~n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 103 (182)
+.|.+||++| +++ ++++|+++. |. ++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|+|||||
T Consensus 2 s~a~~RL~kEl~~l~~~~~~~~~~~-p~-~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 79 (399)
T 4ddg_A 2 AMALKRIHKELNDLARDPPAQCSAG-PV-GDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN 79 (399)
T ss_dssp HHHHHHHHHHHHHHHHSCCSSEEEE-EE-TTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTT
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEE-Ec-CCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccc
Confidence 5789999999 999 678888885 66 68999999999 999999999999999999999999999999999999999
Q ss_pred ccCCCceEcccccCccCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHhCHHHHHHHHHHHHhcCCCCCccccc
Q 030162 104 IDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFIR 180 (182)
Q Consensus 104 I~~~G~vc~~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~~~~~~~~~~~~~ 180 (182)
|+.+|.||+++|.++|+|++|+++||.+|++||.+|++++|+|.+||.+|.+|+++|.++||+|+.+++.....+++
T Consensus 80 v~~~G~iCl~il~~~W~p~~~i~~vL~~i~~ll~~pnp~~p~n~~aa~~~~~d~~~y~~~~~~~~~~~a~~~v~~De 156 (399)
T 4ddg_A 80 INSNGSISLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAMGGSAYDE 156 (399)
T ss_dssp BCTTCBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHTSCTTHHHH
T ss_pred cCCCCeEeCcccccCCCccccHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhhccccchhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998877664
No 41
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=4.1e-42 Score=263.35 Aligned_cols=141 Identities=27% Similarity=0.496 Sum_probs=126.0
Q ss_pred CCCCcHHHHHHHhh-hCC--CC------------CCCceEEccCCCCCceEEEEEE-eCCCCCCC--CCEEEEEEEcCCC
Q 030162 24 VKKQSAGELRLHRG-SVI--QP------------PSARFITFPNGKDDLMNFEVSI-RPDEGYYV--GGTFVFTFQVSPI 85 (182)
Q Consensus 24 ~~~~s~~~~RL~~E-~~l--~~------------~~~~~~~~~~~~~n~~~w~~~i-gp~~tpy~--gg~f~~~i~fp~~ 85 (182)
.+|++.+.+||++| +++ +. +.++.+. +. ++|+++|+++| ||++|||+ ||.|++.|.||++
T Consensus 3 ~~Ms~~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~-~~-~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~ 80 (167)
T 4ds2_A 3 GSMKNISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFS-VD-TDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDD 80 (167)
T ss_dssp --CCCCCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEE-EE-ESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTT
T ss_pred ccccHHHHHHHHHHHHHHHhCcccccccccccCCCCcEEEE-eC-CCcccEEEEEEECCCCCCccCCCCEEEEEEECCCC
Confidence 46778889999999 998 33 4456664 45 78999999999 99999999 9999999999999
Q ss_pred CCCCCCceeeecccccccccCCCceEcccccCccCCCCCHHHHHH-HHHHhhcC--CCCCCcccHHHHHHHHhCHHHHHH
Q 030162 86 YPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIY-GLFHLFTQ--PNYEDPLNHEAAAVLRDNPKLFES 162 (182)
Q Consensus 86 YP~~pP~v~f~t~i~HPnI~~~G~vc~~~l~~~W~p~~~i~~iL~-~i~~ll~~--p~~~~p~n~~a~~~~~~~~~~f~~ 162 (182)
||++||+|+|.|+||||||+.+|.||+++|.++|+|+++++++|. .|++|+.+ |++++|+|.|||.+|++|+++|++
T Consensus 81 YP~~pP~v~f~t~i~HPnv~~~G~iCl~il~~~W~p~~~i~~vll~~l~~l~~~~~pn~~~p~n~eaa~l~~~d~~~f~~ 160 (167)
T 4ds2_A 81 YPHEPPTVRFVTPVYSPLVTGEGGICDRMVNDFWTPDQHASDVIKLVLDRVFSQYKSRRDDDVNPEARHYLEKFPQDFAA 160 (167)
T ss_dssp TTTSCCEEEESSCCCCSSCCTTSCCCTHHHHTTCCTTSCHHHHHHHHHHHHHTSTTSCCSCCCCHHHHHHHHHCHHHHHH
T ss_pred CCCCCCEEEEeCCcccccCCCCCEEEcccCcCCCCCCCChHHHHHHHHHHHHhcCCCCCcchHhHHHHHHHHHCHHHHHH
Confidence 999999999999999999999999999999999999999999754 67778775 899999999999999999999999
Q ss_pred HHHH
Q 030162 163 NVRR 166 (182)
Q Consensus 163 ~~r~ 166 (182)
+||+
T Consensus 161 ~vrr 164 (167)
T 4ds2_A 161 RVRR 164 (167)
T ss_dssp HHTT
T ss_pred HHhh
Confidence 9983
No 42
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=1.9e-40 Score=251.20 Aligned_cols=133 Identities=20% Similarity=0.249 Sum_probs=117.2
Q ss_pred CCCCCcHHHHHHHhh-hCC--C-CCCCceEEccCCC-CCceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeee
Q 030162 23 PVKKQSAGELRLHRG-SVI--Q-PPSARFITFPNGK-DDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCK 96 (182)
Q Consensus 23 ~~~~~s~~~~RL~~E-~~l--~-~~~~~~~~~~~~~-~n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~ 96 (182)
......++.+||++| +++ + +++++++.....+ .|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.
T Consensus 15 ~~~~~~~~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~ 94 (156)
T 2q0v_A 15 YFQGIVPRSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFD 94 (156)
T ss_dssp CCSSCCCHHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEES
T ss_pred CCcccchHHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEE
Confidence 335567888999999 999 3 5678888643312 2699999999 99999999999999999999999999999999
Q ss_pred cccccccccCCCce---EcccccCccCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHhC
Q 030162 97 TKVYHPNIDLEGNV---CLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDN 156 (182)
Q Consensus 97 t~i~HPnI~~~G~v---c~~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~a~~~~~~~ 156 (182)
|+||||||+.+|+| |+++|. +|+|++++++||.+|++||.+|++++|+|.+|+.+|.+|
T Consensus 95 t~i~HPNV~~~G~icisCL~iL~-~WsP~~ti~~vL~sI~~ll~~Pn~~~p~n~~aa~~y~~n 156 (156)
T 2q0v_A 95 TKIEMSCVDNCGRVIKNNLHILK-NWNRNYTIETILISLRQEMLSSANKRLPQPNEGEVYSNN 156 (156)
T ss_dssp BCCCCTTBCTTSBBCGGGSHHHH-TCCTTCCHHHHHHHHHHHTTSTTTTTCCCCCTTCBC---
T ss_pred cccccCCCccCCeEehhhccccc-CCCCcCcHHHHHHHHHHHHhCCCCCCcCChHHHHHhhhC
Confidence 99999999999999 888887 599999999999999999999999999999999998765
No 43
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=5.4e-39 Score=266.86 Aligned_cols=149 Identities=23% Similarity=0.427 Sum_probs=133.2
Q ss_pred CCCCcHHHHHHHhh-hCC--CCCCCce--EEc-cCCCCCceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeee
Q 030162 24 VKKQSAGELRLHRG-SVI--QPPSARF--ITF-PNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCK 96 (182)
Q Consensus 24 ~~~~s~~~~RL~~E-~~l--~~~~~~~--~~~-~~~~~n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~ 96 (182)
..+++.+.+||++| +.| ++++++. +.+ +. ++|++.|+++| ||++|||+||+|+|+|.||++||++||+|+|.
T Consensus 71 ~~~s~~~~kRL~kEl~~L~k~~p~g~~~~i~v~~~-ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~ 149 (323)
T 3ceg_A 71 DANSAARARRLAQEAVTLSTSLPLSSSSSVFVRCD-EERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLE 149 (323)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHCCCCSSCCEEEEEE-SSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEEC
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCCCcccceeeccc-CCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEe
Confidence 35778999999999 999 4555542 222 34 68999999999 99999999999999999999999999999999
Q ss_pred cc-----cccccccCCCceEccccc-------CccCCCC-CHHHHHHHHHHhhc--CCCCCCcccHHH--HHHHHhCHHH
Q 030162 97 TK-----VYHPNIDLEGNVCLNILR-------EDWKPVL-NINTIIYGLFHLFT--QPNYEDPLNHEA--AAVLRDNPKL 159 (182)
Q Consensus 97 t~-----i~HPnI~~~G~vc~~~l~-------~~W~p~~-~i~~iL~~i~~ll~--~p~~~~p~n~~a--~~~~~~~~~~ 159 (182)
|+ ||||||+.+|.||+++|. ++|+|++ ||.+||.+|++||. +|++++|+|.++ +.+|..|+++
T Consensus 150 T~~g~~~ifHPNV~~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLlsIqsLL~~~~Pn~~dP~~~~a~a~~~~~~d~~~ 229 (323)
T 3ceg_A 150 TTGGHSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQSSRE 229 (323)
T ss_dssp CSTTTTCCCBTTBCTTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHHHHHHTSCSSGGGGSTTGGGGTTSHHHHHHHHH
T ss_pred ccCCCcccccCCCCcCCeEechhhccccCCCcCCCCcCcCCHHHHHHHHHHHHcCCCCCCCCccCHHHHHhhhhhhhHHH
Confidence 98 999999999999999997 6899999 89999999999996 778899999987 5789999999
Q ss_pred HHHHHHHHHhcCCC
Q 030162 160 FESNVRRAMAGGYV 173 (182)
Q Consensus 160 f~~~~r~~~~~~~~ 173 (182)
|+++||.|+.+++.
T Consensus 230 Y~~~vr~~t~k~A~ 243 (323)
T 3ceg_A 230 YDGNIRQATVKWAM 243 (323)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998764
No 44
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=1e-38 Score=242.36 Aligned_cols=127 Identities=17% Similarity=0.276 Sum_probs=112.3
Q ss_pred CCCCCcHHHHHHHhh-hCC--CCCCC-ceEEccCCCC--CceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceee
Q 030162 23 PVKKQSAGELRLHRG-SVI--QPPSA-RFITFPNGKD--DLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKC 95 (182)
Q Consensus 23 ~~~~~s~~~~RL~~E-~~l--~~~~~-~~~~~~~~~~--n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f 95 (182)
......++.+||++| +++ +.+++ +++...+ ++ |+++|+++| ||++|||+||+|+++|.||++||++||+|+|
T Consensus 19 ~~~v~~p~~~RL~kEl~~l~~~~~~g~~~~~~~~-~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F 97 (160)
T 2a4d_A 19 STGVKVPRNFRLLEELEEGQKGVGDGTVSWGLED-DEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRF 97 (160)
T ss_dssp --CCCHHHHHHHHHHHHHHHSCCTTSSEEEEESS-TTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEE
T ss_pred CCeeechHHHHHHHHHHHHHhCCCCCcEEEEecC-CccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEE
Confidence 334567899999999 999 44566 5665334 44 489999999 9999999999999999999999999999999
Q ss_pred eccccccccc-CCCceEccccc--CccCCCCCHHHHHHHHHHhhc-CCCCCCcccHHHH
Q 030162 96 KTKVYHPNID-LEGNVCLNILR--EDWKPVLNINTIIYGLFHLFT-QPNYEDPLNHEAA 150 (182)
Q Consensus 96 ~t~i~HPnI~-~~G~vc~~~l~--~~W~p~~~i~~iL~~i~~ll~-~p~~~~p~n~~a~ 150 (182)
.|+||||||+ .+|+||+++|. ++|+|++++++||.+|++||. +||+++|+|.|||
T Consensus 98 ~T~i~HPNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa 156 (160)
T 2a4d_A 98 VTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQ 156 (160)
T ss_dssp SBCCCCTTBCTTTCBBCGGGSHHHHTCCTTCCHHHHHHHHHHHHTSTTTTTCCCCCTTC
T ss_pred ecCceeCCEECCCCEEehhhcCCccCCCccCcHHHHHHHHHHHHccCCCCCCCCChhhc
Confidence 9999999999 59999999998 899999999999999999995 6999999999986
No 45
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-38 Score=233.53 Aligned_cols=113 Identities=17% Similarity=0.405 Sum_probs=99.1
Q ss_pred cHHHHHHHhh-hCC--CCCCCceEEccCCCCCceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeeeccc-ccc
Q 030162 28 SAGELRLHRG-SVI--QPPSARFITFPNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKV-YHP 102 (182)
Q Consensus 28 s~~~~RL~~E-~~l--~~~~~~~~~~~~~~~n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i-~HP 102 (182)
+++.+||++| +++ +.+.++++. +. ++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++ |||
T Consensus 5 ~~a~~RL~kEl~~l~~~~~~~~~~~-~~-~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HP 82 (125)
T 2fo3_A 5 GNANYRIQKELHNFLNNPPINCTLD-VH-PNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHT 82 (125)
T ss_dssp ----CHHHHHHHHHHHSCCTTEEEE-EC-TTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBT
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEE-eC-cchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCC
Confidence 5678999999 999 667888885 55 68999999999 99999999999999999999999999999999997 999
Q ss_pred cccCCCceEcccccCccCCCCCHHHHHHHHHHhhcCCCCC
Q 030162 103 NIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNYE 142 (182)
Q Consensus 103 nI~~~G~vc~~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~ 142 (182)
||+.+|+||+++|.++|+|++|+++||.+|++||.+|+..
T Consensus 83 nv~~~G~iCl~iL~~~W~P~~~i~~vl~si~~ll~~p~~~ 122 (125)
T 2fo3_A 83 HVYSNGDICLSLLGDDYNPSLSISGLVLSIISMLSSAKEK 122 (125)
T ss_dssp TBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHC-----
T ss_pred cCCCCCEEEchhcCCCCCCCCcHHHHHHHHHHHHhCcccc
Confidence 9999999999999999999999999999999999999865
No 46
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=4.9e-38 Score=233.15 Aligned_cols=117 Identities=18% Similarity=0.381 Sum_probs=107.6
Q ss_pred CCCCCcHHHHHHHhh-hCC--CCCCCceEEccCCCCCceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeeecc
Q 030162 23 PVKKQSAGELRLHRG-SVI--QPPSARFITFPNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTK 98 (182)
Q Consensus 23 ~~~~~s~~~~RL~~E-~~l--~~~~~~~~~~~~~~~n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~ 98 (182)
+....+.+.+||++| +++ +++.++.+. +. ++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 14 ~~~~~~~~~~RL~kEl~~l~~~~~~~~~~~-~~-~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~ 91 (136)
T 2h2y_A 14 TKYNLGNANYRIQKELNNFLKNPPINCTID-VH-PSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQK 91 (136)
T ss_dssp SCCCTTSHHHHHHHHHHHHHHSCCTTEEEE-EC-TTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSS
T ss_pred hhccchHHHHHHHHHHHHHHhCCCCCeEEE-ec-cccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCC
Confidence 334566789999999 999 667888885 55 68999999999 9999999999999999999999999999999999
Q ss_pred c-ccccccCCCceEcccccCccCCCCCHHHHHHHHHHhhcCCCC
Q 030162 99 V-YHPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFTQPNY 141 (182)
Q Consensus 99 i-~HPnI~~~G~vc~~~l~~~W~p~~~i~~iL~~i~~ll~~p~~ 141 (182)
+ |||||+.+|+||+++|.++|+|++++++||.+|++||.+|+.
T Consensus 92 i~~HPnv~~~G~ICl~iL~~~WsP~~ti~~vL~si~sll~~p~~ 135 (136)
T 2h2y_A 92 PPKHTHVYSNGDICLSVLGDDYNPSLSISGLILSIISMLSSAKE 135 (136)
T ss_dssp CCCCTTBCTTCCBCCGGGTTTCCTTCCHHHHHHHHHHHHSSSCC
T ss_pred CCCCCcCCCCCEEECccccCCCCCCCcHHHHHHHHHHHHhCcCc
Confidence 6 999999999999999999999999999999999999999874
No 47
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=1.7e-39 Score=241.57 Aligned_cols=125 Identities=19% Similarity=0.364 Sum_probs=110.3
Q ss_pred cHHHHHHHhh-hCC--C-CCCCceEEccCCCC-CceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeeeccccc
Q 030162 28 SAGELRLHRG-SVI--Q-PPSARFITFPNGKD-DLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYH 101 (182)
Q Consensus 28 s~~~~RL~~E-~~l--~-~~~~~~~~~~~~~~-n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 101 (182)
.++.+||++| +++ + +++++++.....++ |+++|+++| ||++|||+||+|+++|.||++||++||+|+|.|+|||
T Consensus 5 ~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 84 (138)
T 1jat_B 5 VPRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKINL 84 (138)
T ss_dssp CCHHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCC
T ss_pred HHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEccccc
Confidence 3567999999 999 3 46788886433122 699999999 9999999999999999999999999999999999999
Q ss_pred ccccCC-Cce--EcccccCccCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHH
Q 030162 102 PNIDLE-GNV--CLNILREDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVL 153 (182)
Q Consensus 102 PnI~~~-G~v--c~~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~a~~~~ 153 (182)
|||+.+ |.| |++++. +|+|++++++||.+|++||.+|++++|+|.+|+.+|
T Consensus 85 Pnv~~~~G~i~~cL~~l~-~W~p~~~i~~vl~~i~~ll~~pn~~~p~~~~~~~~y 138 (138)
T 1jat_B 85 PCVNPTTGEVQTDFHTLR-DWKRAYTMETLLLDLRKEMATPANKKLRQPKEGETF 138 (138)
T ss_dssp TTBCTTTCBBCTTSHHHH-TCCTTCCHHHHHHHHHHHHTSHHHHTSCCCCTTCBC
T ss_pred CCEeCCCCEEeeecccCC-CCCCcCcHHHHHHHHHHHHcCCCCCCCCCcchhhcC
Confidence 999995 999 899886 899999999999999999999999999999988654
No 48
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2e-37 Score=229.73 Aligned_cols=114 Identities=24% Similarity=0.534 Sum_probs=103.1
Q ss_pred CCCCCCcHHHHHHHhh-hCC--CCCCCceEEc-cCCCCCceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeee
Q 030162 22 TPVKKQSAGELRLHRG-SVI--QPPSARFITF-PNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCK 96 (182)
Q Consensus 22 ~~~~~~s~~~~RL~~E-~~l--~~~~~~~~~~-~~~~~n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~ 96 (182)
+.+.|++ +.+||++| +++ ++++++++.. +. ++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.
T Consensus 16 ~~~~Ms~-~~~RL~kEl~~l~~~~~~gi~v~~~~~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~ 93 (136)
T 2a7l_A 16 PRGSMAS-MQKRLQKELLALQNDPPPGMTLNEKSV-QNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFT 93 (136)
T ss_dssp CGGGGTT-SCHHHHHHHHHHHHSCCTTCCCCTTCC-CCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEE
T ss_pred cchhccH-HHHHHHHHHHHHHhCCCCCEEEEEeeC-ccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEe
Confidence 4445555 34999999 999 6678888643 44 78999999999 99999999999999999999999999999999
Q ss_pred cccc--cccccCCCceEcccccCccCCCCCHHHHHHHHHHhhc
Q 030162 97 TKVY--HPNIDLEGNVCLNILREDWKPVLNINTIIYGLFHLFT 137 (182)
Q Consensus 97 t~i~--HPnI~~~G~vc~~~l~~~W~p~~~i~~iL~~i~~ll~ 137 (182)
|++| ||||+.+|+||+++|.++|+|++|+++||.+|++||.
T Consensus 94 T~i~~~HPNV~~~G~ICL~iL~~~WsP~~ti~~vL~sI~slL~ 136 (136)
T 2a7l_A 94 GENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLS 136 (136)
T ss_dssp SSCCCCBTTBCTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHTC
T ss_pred CCCcCCCccCCCCCeEEchhcCCCCCCCCcHHHHHHHHHHHhC
Confidence 9999 9999999999999999999999999999999999984
No 49
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=7.8e-38 Score=239.86 Aligned_cols=123 Identities=18% Similarity=0.291 Sum_probs=110.5
Q ss_pred CcHHHHHHHhh-hCC--CCCCC-ceEEccCCCC--CceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeeeccc
Q 030162 27 QSAGELRLHRG-SVI--QPPSA-RFITFPNGKD--DLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKV 99 (182)
Q Consensus 27 ~s~~~~RL~~E-~~l--~~~~~-~~~~~~~~~~--n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i 99 (182)
..++.+||++| +++ +.+++ +++...+ ++ |+++|+++| ||++|||+||+|+++|.||++||++||+|+|.|+|
T Consensus 33 ~~p~~~RL~kEl~~l~~~~~~g~~~~~~~~-~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i 111 (170)
T 2hlw_A 33 KVPRNFRLLEELEEGQKGVGDGTVSWGLED-DEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKI 111 (170)
T ss_dssp CCCHHHHHHHHHHHHHHCCGGGCEEEEESS-TTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCC
T ss_pred cCHHHHHHHHHHHHHHhCCCCCcEEEEecC-cccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEeccc
Confidence 45689999999 999 45566 5564334 44 499999999 99999999999999999999999999999999999
Q ss_pred cccccc-CCCceEccccc--CccCCCCCHHHHHHHHHHhhc-CCCCCCcccHHHH
Q 030162 100 YHPNID-LEGNVCLNILR--EDWKPVLNINTIIYGLFHLFT-QPNYEDPLNHEAA 150 (182)
Q Consensus 100 ~HPnI~-~~G~vc~~~l~--~~W~p~~~i~~iL~~i~~ll~-~p~~~~p~n~~a~ 150 (182)
|||||+ .+|.||+++|. ++|+|++||++||.+|++||. +||+++|+|.|||
T Consensus 112 ~HPNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa 166 (170)
T 2hlw_A 112 NMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQ 166 (170)
T ss_dssp CCSSBCSSSCBBCTTTCHHHHTCCSSCCHHHHHHHHHHHHHSTTTSSSCCCSSCC
T ss_pred ccCCEeCCCCEEEhhhcCCCCCCCccCcHHHHHHHHHHHHccCCCCCCCCCcccc
Confidence 999999 69999999997 899999999999999999997 5999999999886
No 50
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.6e-37 Score=238.98 Aligned_cols=119 Identities=18% Similarity=0.386 Sum_probs=98.0
Q ss_pred CCCCCCCcHHHHHHHhh-hCC--CCCCCceEEccCCCCCceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeee
Q 030162 21 KTPVKKQSAGELRLHRG-SVI--QPPSARFITFPNGKDDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCK 96 (182)
Q Consensus 21 ~~~~~~~s~~~~RL~~E-~~l--~~~~~~~~~~~~~~~n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~ 96 (182)
+++++..+.+.+||++| ++| ++++++.+. +. ++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.
T Consensus 6 ~~~~~~~~~a~~RL~kEl~~l~~~~~~~i~~~-p~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~ 83 (187)
T 2f4w_A 6 TSSKRAPTTATQRLKQDYLRIKKDPVPYICAE-PL-PSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMI 83 (187)
T ss_dssp --------CHHHHHHHHHHHHHHSCCTTEEEE-EE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEEC
T ss_pred cCCCCCccHHHHHHHHHHHHHHhCCCCCEEEE-Ec-CCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCccccc
Confidence 45557778899999999 999 567888885 66 68999999999 99999999999999999999999999999999
Q ss_pred cccccccccCCCceEcccc---cCccCCCCCHHHHHHHHHHhhcCCCCCC
Q 030162 97 TKVYHPNIDLEGNVCLNIL---REDWKPVLNINTIIYGLFHLFTQPNYED 143 (182)
Q Consensus 97 t~i~HPnI~~~G~vc~~~l---~~~W~p~~~i~~iL~~i~~ll~~p~~~~ 143 (182)
|+ ||||+.+|+||+++| .++|+|+++|.+||.+|++||.+|+++.
T Consensus 84 T~--~~~~~~~G~ICL~iL~~~~~~W~P~~ti~~vL~si~sll~~p~p~~ 131 (187)
T 2f4w_A 84 TP--NGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTL 131 (187)
T ss_dssp SC--CSSBCTTSCBC----------CCTTCCHHHHHHHHHHHHHSCCCCT
T ss_pred CC--CceeccCCeEeeeccccCccCCCCcCcHHHHHHHHHHHhcCCCCCC
Confidence 99 999999999999999 6899999999999999999999998864
No 51
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00 E-value=2e-36 Score=235.22 Aligned_cols=138 Identities=14% Similarity=0.247 Sum_probs=116.3
Q ss_pred CCCCCcHHHHHHHhh-hCC--CC---CCCceEEccCCCCCceEEEEEE-eC-CCCCCCC-----------CEEEEEEEcC
Q 030162 23 PVKKQSAGELRLHRG-SVI--QP---PSARFITFPNGKDDLMNFEVSI-RP-DEGYYVG-----------GTFVFTFQVS 83 (182)
Q Consensus 23 ~~~~~s~~~~RL~~E-~~l--~~---~~~~~~~~~~~~~n~~~w~~~i-gp-~~tpy~g-----------g~f~~~i~fp 83 (182)
+..+++.+.+||++| ++| ++ +.++++. +. ++|+++|+++| || ++|||+| |.|+++|.||
T Consensus 21 ~~~~s~~a~~RL~kEl~~l~~~~~~~~~~~~~~-p~-~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp 98 (186)
T 1zuo_A 21 AVSGSVQASDRLMKELRDIYRSQSYKTGIYSVE-LI-NDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFK 98 (186)
T ss_dssp ---CCHHHHHHHHHHHHHHHTSHHHHTTSEEEE-EE-TTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECC
T ss_pred cccccHHHHHHHHHHHHHHHhCCCCCCCcEEEE-Ec-CCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECC
Confidence 345778899999999 999 33 3567774 55 68999999999 97 9999998 8999999999
Q ss_pred CCCCCCCCceeeecccccc-cccCCCceEccccc-CccCCCCCHHHHHHHHHHhhcCCCCCCcccHHHHHHHHhCHHHHH
Q 030162 84 PIYPHEAPKVKCKTKVYHP-NIDLEGNVCLNILR-EDWKPVLNINTIIYGLFHLFTQPNYEDPLNHEAAAVLRDNPKLFE 161 (182)
Q Consensus 84 ~~YP~~pP~v~f~t~i~HP-nI~~~G~vc~~~l~-~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~a~~~~~~~~~~f~ 161 (182)
++||++||+|+|.|++||| ||+.+|.||+++|. ++|+|+++|++||.+|++||.+|+.+. .|..++++|.
T Consensus 99 ~~YP~~PP~V~f~tpi~hPnnV~~~G~ICL~iL~~~~WsP~~ti~~VL~sI~slL~~p~a~~--------~~~~~~~~Y~ 170 (186)
T 1zuo_A 99 DNFPFDPPFVRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYSIESVIMQINATLVKGKARV--------QFGANKNQYN 170 (186)
T ss_dssp TTTTSSCCEEEEEESCEESTTBCGGGBBCCGGGSTTTCCTTSCHHHHHHHHHHHHHHTTCEE--------CTTCCTTCCC
T ss_pred CCCCCCCCeEEEeCCccCCCccCCCCcEEeccCCCCCCCCcCcHHHHHHHHHHHHcCCChhH--------hhccCHHHHh
Confidence 9999999999999999999 69999999999997 789999999999999999999986542 3445567777
Q ss_pred HHHHHHHhc
Q 030162 162 SNVRRAMAG 170 (182)
Q Consensus 162 ~~~r~~~~~ 170 (182)
+.+++++.+
T Consensus 171 ~~~~~~~~~ 179 (186)
T 1zuo_A 171 LARAQQSYN 179 (186)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777766544
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.90 E-value=2.6e-25 Score=167.17 Aligned_cols=99 Identities=15% Similarity=0.249 Sum_probs=86.4
Q ss_pred CCcHHHHHHHhh-hCCCCCCCceEEccCCCCCceEEEEEE-eCCCCCCCCC----------EEEEEEEcCCCCCCCCCce
Q 030162 26 KQSAGELRLHRG-SVIQPPSARFITFPNGKDDLMNFEVSI-RPDEGYYVGG----------TFVFTFQVSPIYPHEAPKV 93 (182)
Q Consensus 26 ~~s~~~~RL~~E-~~l~~~~~~~~~~~~~~~n~~~w~~~i-gp~~tpy~gg----------~f~~~i~fp~~YP~~pP~v 93 (182)
......+||++| +.|.. ++ .+. .+|+..|..++ ||.+|+|+|| .|.++|.||++||++||+|
T Consensus 29 ~~~~w~~RL~eE~k~L~k----~v-~p~-k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV 102 (172)
T 2z6o_A 29 DRELWVQRLKEEYQSLIR----YV-ENN-KNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEI 102 (172)
T ss_dssp CTHHHHHHHHHHHHHHHH----HH-HHH-HHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCC
T ss_pred ccHHHHHHHHHHHHHHHH----Hh-ccC-ccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCee
Confidence 345669999999 98843 23 244 57889999999 9999999999 9999999999999999999
Q ss_pred eeecc-cccccccCCCceEcccc-cC---ccCCCCCHHHHHH
Q 030162 94 KCKTK-VYHPNIDLEGNVCLNIL-RE---DWKPVLNINTIIY 130 (182)
Q Consensus 94 ~f~t~-i~HPnI~~~G~vc~~~l-~~---~W~p~~~i~~iL~ 130 (182)
+|.+. +|||||+.+|+||++++ ++ .|+|+++|.++|.
T Consensus 103 ~F~~~~~~hpnmY~~G~ICLdIL~kp~Ws~~~P~~~IahiL~ 144 (172)
T 2z6o_A 103 AVPELDGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMA 144 (172)
T ss_dssp BCGGGTTTCSSBCTTSBBCCCTTHHHHHHHHTTSCCHHHHHH
T ss_pred eeCCCCCCCCCCCCCCcEechhhccccccccCCccCHHHHHh
Confidence 99998 99999999999999999 43 4559999999874
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.78 E-value=2.8e-19 Score=135.26 Aligned_cols=89 Identities=22% Similarity=0.385 Sum_probs=78.2
Q ss_pred CCCceEEEEEE-eCCCCCCCCCE---EEEEEEcCCCCCCCCCceeeec-------c---cc-cccccCCCceEcccccCc
Q 030162 54 KDDLMNFEVSI-RPDEGYYVGGT---FVFTFQVSPIYPHEAPKVKCKT-------K---VY-HPNIDLEGNVCLNILRED 118 (182)
Q Consensus 54 ~~n~~~w~~~i-gp~~tpy~gg~---f~~~i~fp~~YP~~pP~v~f~t-------~---i~-HPnI~~~G~vc~~~l~~~ 118 (182)
+|....+-+.+ |...++|+||. |.+.|.||.+||++||.|.|.+ + |+ |||||.+|+||+++|. +
T Consensus 57 ~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m~~~~~~I~~hpnVD~~G~I~lpyL~-~ 135 (162)
T 3r3q_A 57 SDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMNTISSSLPIQEYIDSNGWIALPILH-A 135 (162)
T ss_dssp TTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCTTTSCTTSTHHHHBCTTSBBCCGGGG-S
T ss_pred CCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCccccccccccCCCCCCCCCCcEeCcccc-c
Confidence 45566677777 77779999998 8899999999999999998865 1 77 9999999999999995 6
Q ss_pred cCC-CCCHHHHHHHHHHhhcCCCCCC
Q 030162 119 WKP-VLNINTIIYGLFHLFTQPNYED 143 (182)
Q Consensus 119 W~p-~~~i~~iL~~i~~ll~~p~~~~ 143 (182)
|+| +.++.++|.+|.++|.+|+++.
T Consensus 136 W~p~~s~L~~ll~~l~~lf~ep~~d~ 161 (162)
T 3r3q_A 136 WDPAAMNLIMVVQELMSLLHEPPQDQ 161 (162)
T ss_dssp CCGGGCCHHHHHHHHHHTTSCCCCCC
T ss_pred CCCCcCcHHHHHHHHHHHhcCCCCCC
Confidence 988 6899999999999999999885
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.61 E-value=3.6e-17 Score=120.46 Aligned_cols=96 Identities=15% Similarity=0.325 Sum_probs=74.1
Q ss_pred CcHHHHHHHhh-hCC-CCCCCceEEccCCCCCceEEEEEE-eCCCCCCCCC----------EEEEEEEcCCCCCCCCCce
Q 030162 27 QSAGELRLHRG-SVI-QPPSARFITFPNGKDDLMNFEVSI-RPDEGYYVGG----------TFVFTFQVSPIYPHEAPKV 93 (182)
Q Consensus 27 ~s~~~~RL~~E-~~l-~~~~~~~~~~~~~~~n~~~w~~~i-gp~~tpy~gg----------~f~~~i~fp~~YP~~pP~v 93 (182)
......||+.| ..| . ++..-. ++-..|...+ |+.||+|.|+ .|.+++.||.+||.+||.|
T Consensus 32 ~~~w~~RlkeEy~alI~-----yv~~nK--~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI 104 (168)
T 3kpa_A 32 GDKWTARLKEEYASLIT-----YVEHNK--ASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEI 104 (168)
T ss_dssp THHHHHHHHHHHHHHHH-----HHHHHH--HTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCC
T ss_pred HHHHHHHHHHHHHHHHH-----HHHhcc--cccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEe
Confidence 35689999999 776 2 222112 2224598888 9999999999 9999999999999999999
Q ss_pred eeecc-cccccccCCCceEccccc-Ccc---CCCCCHHHHH
Q 030162 94 KCKTK-VYHPNIDLEGNVCLNILR-EDW---KPVLNINTII 129 (182)
Q Consensus 94 ~f~t~-i~HPnI~~~G~vc~~~l~-~~W---~p~~~i~~iL 129 (182)
+|.+. .+|||++.+|+||+++.- .-| .|.++|...|
T Consensus 105 ~Fp~ldgkt~kmYr~GkICLdIhwkPlW~~n~P~fGiahal 145 (168)
T 3kpa_A 105 ALPELEGKTVKMYRGGKICMTTHFFPLWARNVPYFGISHVL 145 (168)
T ss_dssp BCGGGTTTCSSEETTTEECCCTTHHHHHHHTTTTCCHHHHH
T ss_pred ecccccCcCccccCCCcEEeccccchhhHhcCCchhHHHHH
Confidence 99995 899999999999999861 222 2345665443
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.52 E-value=2.3e-14 Score=106.50 Aligned_cols=80 Identities=24% Similarity=0.394 Sum_probs=70.6
Q ss_pred CCCceEEEEEEeCCCCCCCCCEEE--EEEEcCCCCCCCCCceeeecc------cccccccCCCceEcccccCccCC-CCC
Q 030162 54 KDDLMNFEVSIRPDEGYYVGGTFV--FTFQVSPIYPHEAPKVKCKTK------VYHPNIDLEGNVCLNILREDWKP-VLN 124 (182)
Q Consensus 54 ~~n~~~w~~~igp~~tpy~gg~f~--~~i~fp~~YP~~pP~v~f~t~------i~HPnI~~~G~vc~~~l~~~W~p-~~~ 124 (182)
..++..|.++|. .+|+|+.|. +.|.||++||++||.+ |.++ .+|||||.+|+||++.|.+ |++ ..+
T Consensus 50 ~~~LL~l~GtIp---v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~~~~Vd~~G~i~lpyL~~-W~~~~sn 124 (146)
T 3obq_A 50 SRELMNLTGTIP---VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKTGKHVDANGKIYLPYLHE-WKHPQSD 124 (146)
T ss_dssp TCEEEEEEEEEE---EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECCBTTBCTTCBBCCHHHHT-CCTTTCC
T ss_pred hheEEEEEEEee---eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEECCCCCCCCCCCEecccccc-cCCCCCC
Confidence 468889999996 569999998 5999999999999999 6655 5899999999999999965 987 789
Q ss_pred HHHHHHHHHHhhcC
Q 030162 125 INTIIYGLFHLFTQ 138 (182)
Q Consensus 125 i~~iL~~i~~ll~~ 138 (182)
+.+++..|+++|.+
T Consensus 125 L~~ll~~l~~~F~~ 138 (146)
T 3obq_A 125 LLGLIQVMIVVFGD 138 (146)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999999874
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.44 E-value=0.035 Score=39.25 Aligned_cols=41 Identities=20% Similarity=0.233 Sum_probs=28.2
Q ss_pred ceEEEEEEeC-CCCCCCCCEEEEEEEcCCCCCCCCCceeeec
Q 030162 57 LMNFEVSIRP-DEGYYVGGTFVFTFQVSPIYPHEAPKVKCKT 97 (182)
Q Consensus 57 ~~~w~~~igp-~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t 97 (182)
...+.+.+.+ .+..-+.-.+.+.+.||++||.+||.|...+
T Consensus 37 ~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 37 PPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp SCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred CCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 3556666632 2222234478899999999999999998654
No 57
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.25 E-value=0.22 Score=35.09 Aligned_cols=40 Identities=13% Similarity=0.196 Sum_probs=28.4
Q ss_pred ceEEEEEEeCCCCCCCCCEEEEEEEcCCCCCCCCCceeee
Q 030162 57 LMNFEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCK 96 (182)
Q Consensus 57 ~~~w~~~igp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~ 96 (182)
...+.+.+.+.+..=..-.+.+.+.+|.+||..||.|...
T Consensus 39 ~~~f~i~l~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~l~ 78 (128)
T 2ebk_A 39 GTVFRIHTKAEGFMDADIPLELVFHLPVNYPSCLPGISIN 78 (128)
T ss_dssp CEEEEEEEECCTTTTCCCEEEEEEEECSSTTSSCCCCCCC
T ss_pred CCeEEEEecCCCCCCCCeEEEEEEECCCCCCCCCCeEEEE
Confidence 4577777744331111247899999999999999999755
No 58
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=94.13 E-value=0.12 Score=36.91 Aligned_cols=41 Identities=27% Similarity=0.592 Sum_probs=28.9
Q ss_pred ceEEEEEEeCCCCCCCCCEEEEEEEcCCCCCCCCCceeeec
Q 030162 57 LMNFEVSIRPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKT 97 (182)
Q Consensus 57 ~~~w~~~igp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t 97 (182)
...+.+.+.+....-..-.+.+.+.+|++||..||.|.+.+
T Consensus 45 ~~~f~I~l~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 85 (138)
T 2yz0_A 45 QIIFEITLRSVDKEPVESSITLHFAMTPMYPYTAPEIEFKN 85 (138)
T ss_dssp CSCEEEEEECSSCSSCCCEEEEEEECCSSTTSSCCEEEEEC
T ss_pred CcEEEEEEecCCCCCCceEEEEEEECCCCCCCCCCeEEEec
Confidence 45577777443222123478899999999999999998754
No 59
>1tt5_E Ubiquitin-conjugating enzyme E2 M; cell cycle, ligase; 2.60A {Homo sapiens}
Probab=93.14 E-value=0.061 Score=27.51 Aligned_cols=15 Identities=47% Similarity=0.877 Sum_probs=12.3
Q ss_pred CcchhhHHHHHHHHH
Q 030162 1 MIKLFKVKEKQRENA 15 (182)
Q Consensus 1 ~~~~~~~~~~~~~~~ 15 (182)
||+||++++++.++.
T Consensus 1 MIkLFSlK~kk~~e~ 15 (26)
T 1tt5_E 1 MIKLFSLKQQKKEEE 15 (26)
T ss_pred CcchhhhhHHHHHhh
Confidence 899999999885444
No 60
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=92.76 E-value=0.33 Score=34.06 Aligned_cols=25 Identities=32% Similarity=0.670 Sum_probs=21.8
Q ss_pred CEEEEEEEcCCCCCCCCCceeeecc
Q 030162 74 GTFVFTFQVSPIYPHEAPKVKCKTK 98 (182)
Q Consensus 74 g~f~~~i~fp~~YP~~pP~v~f~t~ 98 (182)
-.+.+.+.+|++||..+|.|...+.
T Consensus 59 ~~~~L~~~~p~~YP~~~P~i~~~~~ 83 (128)
T 2day_A 59 VCFTLVLQVPAEYPHEVPQISIRNP 83 (128)
T ss_dssp CEEEEEEEECSSTTSSCCEEEEEEE
T ss_pred eeEEEEEEcCCCCCCCCCCeEEEcC
Confidence 4788999999999999999987763
No 61
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=92.04 E-value=0.44 Score=34.83 Aligned_cols=23 Identities=13% Similarity=0.177 Sum_probs=20.8
Q ss_pred EEEEEEEcCCCCCCCCCceeeec
Q 030162 75 TFVFTFQVSPIYPHEAPKVKCKT 97 (182)
Q Consensus 75 ~f~~~i~fp~~YP~~pP~v~f~t 97 (182)
.+.+.|.+|.+||..+|.|...+
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~ 98 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRS 98 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEEC
T ss_pred eEEEEEEcCCCCCCCCCcEEEEe
Confidence 79999999999999999998554
No 62
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=91.36 E-value=0.26 Score=34.98 Aligned_cols=39 Identities=18% Similarity=0.286 Sum_probs=26.7
Q ss_pred eEEEEEEeCCCC--CCCCCEEEEEEEcCCCCCCCCCceeee
Q 030162 58 MNFEVSIRPDEG--YYVGGTFVFTFQVSPIYPHEAPKVKCK 96 (182)
Q Consensus 58 ~~w~~~igp~~t--py~gg~f~~~i~fp~~YP~~pP~v~f~ 96 (182)
..+.+.+.+.+. .-..-.+.+.|.||++||..+|.|...
T Consensus 45 ~~~~i~l~~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~ 85 (137)
T 1ukx_A 45 PEINLVLYPQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLK 85 (137)
T ss_dssp CCEEEEECCTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEE
T ss_pred cEEEEEEecCCcCCcccceEEEEEEECCCCCCCCCCcEEEe
Confidence 456666643221 111246899999999999999999874
No 63
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=91.18 E-value=0.63 Score=35.32 Aligned_cols=64 Identities=17% Similarity=0.350 Sum_probs=48.1
Q ss_pred CCceEEEEEE-eCCCCCCCCCEEEEEEEcCCCCCCCCCceeeecccccccccCCCceEcccccCccCCCCCHHHHHHHHH
Q 030162 55 DDLMNFEVSI-RPDEGYYVGGTFVFTFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTIIYGLF 133 (182)
Q Consensus 55 ~n~~~w~~~i-gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnI~~~G~vc~~~l~~~W~p~~~i~~iL~~i~ 133 (182)
.++....+.+ ... |....++|.++.+||.++|.+.-.-|+ |. .-.|.+..++.+++...+
T Consensus 23 ~~~~~i~l~~~D~~-----gR~H~l~v~l~~~yp~~~P~~~~DlP~--~~------------~~~w~~~ssL~~v~~qF~ 83 (186)
T 3zqs_A 23 TCFSTIKLKAEDAS-----GREHLITLKLKAKYPAESPDYFVDFPV--PF------------CASWTPQSSLISIYSQFL 83 (186)
T ss_dssp TTSSEEEEEEECTT-----SCEEEEEEECCTTTTTSCCEEECCCSS--CC------------CCCCCTTCCHHHHHHHHH
T ss_pred CCccEEEEEEEeCC-----CCeEEEEEEECCCCCCCCCeeEEcCCC--Cc------------ccccCCCccHHHHHHHHH
Confidence 4677777777 443 588999999999999999988655443 11 138999999988888777
Q ss_pred Hhhc
Q 030162 134 HLFT 137 (182)
Q Consensus 134 ~ll~ 137 (182)
..+.
T Consensus 84 ~~Le 87 (186)
T 3zqs_A 84 AAIE 87 (186)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6653
No 64
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=90.70 E-value=0.32 Score=35.38 Aligned_cols=24 Identities=17% Similarity=0.384 Sum_probs=21.0
Q ss_pred EEEEEEEcCCCCCCCCCceeeecc
Q 030162 75 TFVFTFQVSPIYPHEAPKVKCKTK 98 (182)
Q Consensus 75 ~f~~~i~fp~~YP~~pP~v~f~t~ 98 (182)
.+.+.+.+|.+||..||.|...+.
T Consensus 74 ~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 74 MFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEECSSTTSSCCCCEEECT
T ss_pred eEEEEEECCCCCCCCCCeEEEEcc
Confidence 588999999999999999986654
No 65
>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A
Probab=59.31 E-value=1.9 Score=29.71 Aligned_cols=30 Identities=3% Similarity=-0.156 Sum_probs=0.0
Q ss_pred CCCCCcccHHHHHHHHhCHHHHHHHHHHHH
Q 030162 139 PNYEDPLNHEAAAVLRDNPKLFESNVRRAM 168 (182)
Q Consensus 139 p~~~~p~n~~a~~~~~~~~~~f~~~~r~~~ 168 (182)
.....|.+.++|.+|..|++.|...||.|.
T Consensus 21 ~~~~~PQDA~VA~qy~~~~~~f~~TAr~WT 50 (108)
T 2cwb_A 21 ETTTEAVDAATAEKVFKQYANDNGVDGEWT 50 (108)
T ss_dssp ------------------------------
T ss_pred cccCCchhHHHHHHHHhchhcccccccccc
Confidence 345678999999999999999999999998
No 66
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=33.01 E-value=56 Score=28.44 Aligned_cols=26 Identities=23% Similarity=0.365 Sum_probs=21.8
Q ss_pred cHHHHHHHHhCHHHHHHHHHHHHhcC
Q 030162 146 NHEAAAVLRDNPKLFESNVRRAMAGG 171 (182)
Q Consensus 146 n~~a~~~~~~~~~~f~~~~r~~~~~~ 171 (182)
-.|+..+..+||+.|.+.|+++++.+
T Consensus 277 ~ee~~~l~~~dp~~~~~~~~~Sm~rh 302 (552)
T 2fkn_A 277 LDEADRLRQDTPELYVRLAKQSMKKH 302 (552)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 34778888999999999999998764
No 67
>1x87_A Urocanase protein; structural genomics, protein STR initiative, MCSG, PSI, midwest center for structural genomi; HET: MSE NAD; 2.40A {Geobacillus stearothermophilus} SCOP: e.51.1.1
Probab=32.42 E-value=59 Score=28.33 Aligned_cols=26 Identities=23% Similarity=0.374 Sum_probs=21.8
Q ss_pred cHHHHHHHHhCHHHHHHHHHHHHhcC
Q 030162 146 NHEAAAVLRDNPKLFESNVRRAMAGG 171 (182)
Q Consensus 146 n~~a~~~~~~~~~~f~~~~r~~~~~~ 171 (182)
-.|+..+..+||+.|.+.|+++++.+
T Consensus 276 ~ee~~~l~~~dp~~~~~~~~~Sm~rh 301 (551)
T 1x87_A 276 LDEAAELRARDPKQYIARAKQSIAAH 301 (551)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 34778888999999999999998764
No 68
>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} SCOP: e.51.1.1 PDB: 1w1u_A* 1uwl_A* 2v7g_A*
Probab=32.05 E-value=60 Score=28.28 Aligned_cols=25 Identities=12% Similarity=0.130 Sum_probs=21.4
Q ss_pred HHHHHHHHhCHHHHHHHHHHHHhcC
Q 030162 147 HEAAAVLRDNPKLFESNVRRAMAGG 171 (182)
Q Consensus 147 ~~a~~~~~~~~~~f~~~~r~~~~~~ 171 (182)
.|+..+..+||+.|.+.|+++++.+
T Consensus 282 ee~~~l~~~dp~~~~~~~~~Sm~rh 306 (557)
T 1uwk_A 282 EQYRDRAQTEPAAVVKAAKQSMAVH 306 (557)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 4778888999999999999997763
No 69
>2jrw_A Cyclic extended PEP.1; acetylcholine receptor, phage display, peptide cyclization, immune system; NMR {Synthetic}
Probab=30.50 E-value=20 Score=17.48 Aligned_cols=17 Identities=29% Similarity=0.591 Sum_probs=10.2
Q ss_pred CCCCCceeeeccccccc
Q 030162 87 PHEAPKVKCKTKVYHPN 103 (182)
Q Consensus 87 P~~pP~v~f~t~i~HPn 103 (182)
|...|.-.|..+.|||-
T Consensus 4 pmtlpenyfserpyhpp 20 (26)
T 2jrw_A 4 PMTLPENYFSERPYHPP 20 (26)
T ss_dssp CCCCSSSSCCSSSCCSC
T ss_pred ccccchhhcccCCCCCC
Confidence 34445555777777774
No 70
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=23.36 E-value=67 Score=24.38 Aligned_cols=25 Identities=20% Similarity=0.259 Sum_probs=21.6
Q ss_pred CCCEEEEEEEcCCCCCC-----CCCceeee
Q 030162 72 VGGTFVFTFQVSPIYPH-----EAPKVKCK 96 (182)
Q Consensus 72 ~gg~f~~~i~fp~~YP~-----~pP~v~f~ 96 (182)
+.|.|.|.-.+|--||. .||.|.|.
T Consensus 109 ~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~ 138 (209)
T 2bum_A 109 GTGFWSFNTIKPGAVPGRKGSTQAPHISLI 138 (209)
T ss_dssp TTCCEEEEEECCCCCBCSTTCBCCCCEEEE
T ss_pred CCcEEEEEEEccCcccCCCCCccCcEEEEE
Confidence 35899999999999998 78888775
Done!