BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030165
(182 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1FB0|A Chain A, Crystal Structure Of Thioredoxin M From Spinach
Chloroplast (Reduced Form)
pdb|1FB0|B Chain B, Crystal Structure Of Thioredoxin M From Spinach
Chloroplast (Reduced Form)
pdb|1FB6|A Chain A, Crystal Structure Of Thioredoxin M From Spinach
Chloroplast (Oxidized Form)
pdb|1FB6|B Chain B, Crystal Structure Of Thioredoxin M From Spinach
Chloroplast (Oxidized Form)
Length = 105
Score = 169 bits (428), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 75/105 (71%), Positives = 94/105 (89%)
Query: 77 EVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDD 136
EVQ V DSSW+ V+ SE PV+V+FWAPWCGPC++IAP I+ELAKEY+GK+A +KLNTD+
Sbjct: 1 EVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDE 60
Query: 137 SPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
+P IAT+Y IRSIPTVLFFKNGE+KESIIGAVPKSTL+ +++KY+
Sbjct: 61 APGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYL 105
>pdb|2PUK|C Chain C, Crystal Srtucture Of The Binary Complex Between
Ferredoxin: Thioredoxin Reductase And Thioredoxin M
pdb|2PUK|G Chain G, Crystal Srtucture Of The Binary Complex Between
Ferredoxin: Thioredoxin Reductase And Thioredoxin M
Length = 106
Score = 167 bits (422), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 74/105 (70%), Positives = 93/105 (88%)
Query: 77 EVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDD 136
EVQ V DSSW+ V+ SE PV+V+FWAPWCGP ++IAP I+ELAKEY+GK+A +KLNTD+
Sbjct: 1 EVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPSKLIAPVIDELAKEYSGKIAVYKLNTDE 60
Query: 137 SPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
+P IAT+Y IRSIPTVLFFKNGE+KESIIGAVPKSTL+ +++KY+
Sbjct: 61 APGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYL 105
>pdb|1GL8|A Chain A, Solution Structure Of Thioredoxin M From Spinach, Oxidized
Form
Length = 104
Score = 166 bits (420), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 73/103 (70%), Positives = 92/103 (89%)
Query: 79 QVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSP 138
Q V DSSW+ V+ SE PV+V+FWAPWCGPC++IAP I+ELAKEY+GK+A +KLNTD++P
Sbjct: 2 QDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAP 61
Query: 139 NIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
IAT+Y IRSIPTVLFFKNGE+KESIIGAVPKSTL+ +++KY+
Sbjct: 62 GIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYL 104
>pdb|1DBY|A Chain A, Nmr Structures Of Chloroplast Thioredoxin M Ch2 From The
Green Alga Chlamydomonas Reinhardtii
Length = 107
Score = 144 bits (363), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 86/105 (81%)
Query: 77 EVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDD 136
E V D +++N+V+ S PVLV+FWAPWCGPCR+IAP ++E+A EY K+ C KLNTD+
Sbjct: 2 EAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDE 61
Query: 137 SPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
SPN+A++YGIRSIPT++ FK G+K E+IIGAVPK+T+ T++KY+
Sbjct: 62 SPNVASEYGIRSIPTIMVFKGGKKCETIIGAVPKATIVQTVEKYL 106
>pdb|2YJ7|A Chain A, Crystal Structure Of A Hyperstable Protein From The
Precambrian Period
pdb|2YJ7|B Chain B, Crystal Structure Of A Hyperstable Protein From The
Precambrian Period
Length = 106
Score = 130 bits (326), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 61/101 (60%), Positives = 78/101 (77%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
VTD ++E V+ S+ PVLV+FWAPWCGPCRMIAP IEELAKEY GKV K+N D++PN
Sbjct: 6 VTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENPNT 65
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
A +YGIRSIPT+L FKNG+ + ++GA PK L +DK++
Sbjct: 66 AAQYGIRSIPTLLLFKNGQVVDRLVGAQPKEALKERIDKHL 106
>pdb|2FCH|A Chain A, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|B Chain B, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|C Chain C, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|D Chain D, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|E Chain E, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|F Chain F, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|G Chain G, Crystal Structure Of Thioredoxin Mutant G74s
Length = 108
Score = 117 bits (293), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 69/98 (70%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
+TD S++ V+ ++ +LV+FWA WCGPC+MIAP ++E+A EY GK+ KLN D +P
Sbjct: 7 LTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGT 66
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
A KYGIRSIPT+L FKNGE + +GA+ K L LD
Sbjct: 67 APKYGIRSIPTLLLFKNGEVAATKVGALSKGQLKEFLD 104
>pdb|3DXB|A Chain A, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|B Chain B, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|C Chain C, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|D Chain D, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|E Chain E, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|F Chain F, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|G Chain G, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|H Chain H, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
Length = 222
Score = 117 bits (293), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 68/98 (69%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
+TD S++ V+ ++ +LV+FWA WCGPC+MIAP ++E+A EY GK+ KLN D +P
Sbjct: 17 LTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGT 76
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
A KYGIR IPT+L FKNGE + +GA+ K L LD
Sbjct: 77 APKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 114
>pdb|1ZZY|A Chain A, Crystal Structure Of Thioredoxin Mutant L7v
pdb|1ZZY|B Chain B, Crystal Structure Of Thioredoxin Mutant L7v
Length = 108
Score = 117 bits (292), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 68/98 (69%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
VTD S++ V+ ++ +LV+FWA WCGPC+MIAP ++E+A EY GK+ KLN D +P
Sbjct: 7 VTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGT 66
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
A KYGIR IPT+L FKNGE + +GA+ K L LD
Sbjct: 67 APKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 104
>pdb|2H75|A Chain A, Crystal Structure Of Thioredoxin Mutant D13e In Hexagonal
(P61) Space Group
pdb|2H75|B Chain B, Crystal Structure Of Thioredoxin Mutant D13e In Hexagonal
(P61) Space Group
Length = 108
Score = 117 bits (292), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 68/98 (69%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
+TD S+E V+ ++ +LV+FWA WCGPC+MIAP ++E+A EY GK+ KLN D +P
Sbjct: 7 LTDDSFETDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGT 66
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
A KYGIR IPT+L FKNGE + +GA+ K L LD
Sbjct: 67 APKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 104
>pdb|2H73|A Chain A, Crystal Structure Of Thioredoxin Mutant D43e In Hexagonal
(P61) Space Group
pdb|2H73|B Chain B, Crystal Structure Of Thioredoxin Mutant D43e In Hexagonal
(P61) Space Group
Length = 108
Score = 117 bits (292), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 68/98 (69%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
+TD S++ V+ ++ +LV+FWA WCGPC+MIAP +EE+A EY GK+ KLN D +P
Sbjct: 7 LTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILEEIADEYQGKLTVAKLNIDQNPGT 66
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
A KYGIR IPT+L FKNGE + +GA+ K L LD
Sbjct: 67 APKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 104
>pdb|2H71|A Chain A, Crystal Structure Of Thioredoxin Mutant D47e In Hexagonal
(P61) Space Group
pdb|2H71|B Chain B, Crystal Structure Of Thioredoxin Mutant D47e In Hexagonal
(P61) Space Group
Length = 108
Score = 116 bits (290), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 69/98 (70%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
+TD S++ V+ ++ +LV+FWA WCGPC+MIAP ++E+A+EY GK+ KLN D +P
Sbjct: 7 LTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIAEEYQGKLTVAKLNIDQNPGT 66
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
A KYGIR IPT+L FKNGE + +GA+ K L LD
Sbjct: 67 APKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 104
>pdb|2TRX|A Chain A, Crystal Structure Of Thioredoxin From Escherichia Coli At
1.68 Angstroms Resolution
pdb|2TRX|B Chain B, Crystal Structure Of Thioredoxin From Escherichia Coli At
1.68 Angstroms Resolution
pdb|1T7P|B Chain B, T7 Dna Polymerase Complexed To Dna PrimerTEMPLATE,A
Nucleoside Triphosphate, And Its Processivity Factor
Thioredoxin
pdb|1SKR|B Chain B, T7 Dna Polymerase Complexed To Dna Primer/template And
Ddatp
pdb|1SKS|B Chain B, Binary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A CIS-Syn Thymine Dimer On The
Template
pdb|1SKW|B Chain B, Binary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A DISORDERED CIS-Syn Thymine
Dimer On The Template
pdb|1SL0|B Chain B, Ternary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A DISORDERED CIS-Syn Thymine
Dimer On The Template And An Incoming Nucleotide
pdb|1SL0|D Chain D, Ternary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A DISORDERED CIS-Syn Thymine
Dimer On The Template And An Incoming Nucleotide
pdb|1SL1|B Chain B, Binary 5' Complex Of T7 Dna Polymerase With A Dna
Primer/template Containing A Cis-syn Thymine Dimer On
The Template
pdb|1SL2|B Chain B, Ternary 5' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A CIS-Syn Thymine Dimer On The
Template And An Incoming Nucleotide
pdb|1TK0|B Chain B, T7 Dna Polymerase Ternary Complex With 8 Oxo Guanosine And
Ddctp At The Insertion Site
pdb|1TK5|B Chain B, T7 Dna Polymerase Binary Complex With 8 Oxo Guanosine In
The Templating Strand
pdb|1TK8|B Chain B, T7 Dna Polymerase Ternary Complex With 8 Oxo Guanosine And
Damp At The Elongation Site
pdb|1TKD|B Chain B, T7 Dna Polymerase Ternary Complex With 8 Oxo Guanosine And
Dcmp At The Elongation Site
pdb|1T8E|B Chain B, T7 Dna Polymerase Ternary Complex With Dctp At The
Insertion Site.
pdb|1X9M|B Chain B, T7 Dna Polymerase In Complex With An N-2-
Acetylaminofluorene-adducted Dna
pdb|1X9S|B Chain B, T7 Dna Polymerase In Complex With A PrimerTEMPLATE DNA
Containing A Disordered N-2 Aminofluorene On The
Template, Crystallized With Dideoxy-Ctp As The Incoming
Nucleotide.
pdb|1X9W|B Chain B, T7 Dna Polymerase In Complex With A Primer/template Dna
Containing A Disordered N-2 Aminofluorene On The
Template, Crystallized With Dideoxy-atp As The Incoming
Nucleotide.
pdb|2BTO|T Chain T, Structure Of Btuba From Prosthecobacter Dejongeii
pdb|1ZYQ|B Chain B, T7 Dna Polymerase In Complex With 8og And Incoming Ddatp
pdb|2AJQ|B Chain B, Structure Of Replicative Dna Polymerase Provides Insigts
Into The Mechanisms For Processivity, Frameshifting And
Editing
pdb|2AJQ|I Chain I, Structure Of Replicative Dna Polymerase Provides Insigts
Into The Mechanisms For Processivity, Frameshifting And
Editing
pdb|2H6X|A Chain A, Crystal Structure Of Thioredoxin Wild Type In Hexagonal
(P61) Space Group
pdb|2H6X|B Chain B, Crystal Structure Of Thioredoxin Wild Type In Hexagonal
(P61) Space Group
Length = 108
Score = 115 bits (289), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 68/98 (69%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
+TD S++ V+ ++ +LV+FWA WCGPC+MIAP ++E+A EY GK+ KLN D +P
Sbjct: 7 LTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGT 66
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
A KYGIR IPT+L FKNGE + +GA+ K L LD
Sbjct: 67 APKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 104
>pdb|1XOB|A Chain A, Thioredoxin (Reduced Dithio Form), Nmr, 20 Structures
pdb|1XOA|A Chain A, Thioredoxin (Oxidized Disulfide Form), Nmr, 20 Structures
Length = 108
Score = 115 bits (289), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 68/98 (69%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
+TD S++ V+ ++ +LV+FWA WCGPC+MIAP ++E+A EY GK+ KLN D +P
Sbjct: 7 LTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGT 66
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
A KYGIR IPT+L FKNGE + +GA+ K L LD
Sbjct: 67 APKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 104
>pdb|2H74|A Chain A, Crystal Structure Of Thioredoxin Mutant D2e In Hexagonal
(P61) Space Group
pdb|2H74|B Chain B, Crystal Structure Of Thioredoxin Mutant D2e In Hexagonal
(P61) Space Group
Length = 108
Score = 115 bits (289), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 68/98 (69%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
+TD S++ V+ ++ +LV+FWA WCGPC+MIAP ++E+A EY GK+ KLN D +P
Sbjct: 7 LTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGT 66
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
A KYGIR IPT+L FKNGE + +GA+ K L LD
Sbjct: 67 APKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 104
>pdb|2H76|A Chain A, Crystal Structure Of Thioredoxin Mutant D10e In Hexagonal
(P61) Space Group
pdb|2H76|B Chain B, Crystal Structure Of Thioredoxin Mutant D10e In Hexagonal
(P61) Space Group
Length = 108
Score = 115 bits (288), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 68/98 (69%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
+TD S++ V+ ++ +LV+FWA WCGPC+MIAP ++E+A EY GK+ KLN D +P
Sbjct: 7 LTDESFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGT 66
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
A KYGIR IPT+L FKNGE + +GA+ K L LD
Sbjct: 67 APKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 104
>pdb|2EIO|A Chain A, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIO|B Chain B, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIO|C Chain C, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIO|D Chain D, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
Length = 108
Score = 115 bits (287), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 71/103 (68%)
Query: 76 NEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTD 135
+++ +TD S++ V+ ++ +LV+FWA WCGPC+MIAP ++E+A EY GK+ KLN D
Sbjct: 2 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNID 61
Query: 136 DSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
+P A KYGIR IPT+L FKNGE + +GA+ K L LD
Sbjct: 62 QNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKCFLD 104
>pdb|2TIR|A Chain A, Crystal Structure Analysis Of A Mutant Escherichia Coli
Thioredoxin In Which Lysine 36 Is Replaced By Glutamic
Acid
Length = 108
Score = 115 bits (287), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 67/98 (68%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
+TD S++ V+ ++ +LV+FWA WCGPC MIAP ++E+A EY GK+ KLN D +P
Sbjct: 7 LTDDSFDTDVLKADGAILVDFWAEWCGPCEMIAPILDEIADEYQGKLTVAKLNIDQNPGT 66
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
A KYGIR IPT+L FKNGE + +GA+ K L LD
Sbjct: 67 APKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 104
>pdb|2EIR|A Chain A, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIR|B Chain B, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIR|C Chain C, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIR|D Chain D, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
Length = 108
Score = 115 bits (287), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 71/103 (68%)
Query: 76 NEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTD 135
+++ +TD S++ V+ ++ +LV+FWA WCGPC+MIAP ++E+A EY GK+ KLN D
Sbjct: 2 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNID 61
Query: 136 DSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
+P A KYGIR IPT+L FKNGE + +GA+ K L LD
Sbjct: 62 QNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKCFLD 104
>pdb|2H6Z|A Chain A, Crystal Structure Of Thioredoxin Mutant E44d In Hexagonal
(P61) Space Group
pdb|2H6Z|B Chain B, Crystal Structure Of Thioredoxin Mutant E44d In Hexagonal
(P61) Space Group
Length = 108
Score = 114 bits (286), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 71/103 (68%)
Query: 76 NEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTD 135
+++ +TD S++ V+ ++ +LV+FWA WCGPC+MIAP ++++A EY GK+ KLN D
Sbjct: 2 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDDIADEYQGKLTVAKLNID 61
Query: 136 DSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
+P A KYGIR IPT+L FKNGE + +GA+ K L LD
Sbjct: 62 QNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 104
>pdb|2H72|A Chain A, Crystal Structure Of Thioredoxin Mutant E85d In Hexagonal
(P61) Space Group
pdb|2H72|B Chain B, Crystal Structure Of Thioredoxin Mutant E85d In Hexagonal
(P61) Space Group
Length = 108
Score = 114 bits (286), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 71/103 (68%)
Query: 76 NEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTD 135
+++ +TD S++ V+ ++ +LV+FWA WCGPC+MIAP ++E+A EY GK+ KLN D
Sbjct: 2 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNID 61
Query: 136 DSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
+P A KYGIR IPT+L FKNG+ + +GA+ K L LD
Sbjct: 62 QNPGTAPKYGIRGIPTLLLFKNGDVAATKVGALSKGQLKEFLD 104
>pdb|2H6Y|A Chain A, Crystal Structure Of Thioredoxin Mutant E48d In Hexagonal
(P61) Space Group
pdb|2H6Y|B Chain B, Crystal Structure Of Thioredoxin Mutant E48d In Hexagonal
(P61) Space Group
Length = 108
Score = 114 bits (286), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 71/103 (68%)
Query: 76 NEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTD 135
+++ +TD S++ V+ ++ +LV+FWA WCGPC+MIAP ++E+A +Y GK+ KLN D
Sbjct: 2 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADDYQGKLTVAKLNID 61
Query: 136 DSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
+P A KYGIR IPT+L FKNGE + +GA+ K L LD
Sbjct: 62 QNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 104
>pdb|2EIQ|A Chain A, Design Of Disulfide-linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIQ|B Chain B, Design Of Disulfide-linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
Length = 108
Score = 114 bits (285), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 70/103 (67%)
Query: 76 NEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTD 135
+++ +TD S++ V+ ++ +LV+FWA WCGPC+MIAP ++E+A EY GK+ KLN D
Sbjct: 2 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNID 61
Query: 136 DSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
+P A KYGIR IPT+L FKNGE +GA+ K L LD
Sbjct: 62 QNPGTAPKYGIRGIPTLLLFKNGEVAACKVGALSKGQLKEFLD 104
>pdb|1T00|A Chain A, The Structure Of Thioredoxin From S. Coelicolor
Length = 112
Score = 114 bits (285), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 71/101 (70%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
VTD S+E V+ ++ PVLV+FWA WCGPCR IAP++E +A EY K+ KLN D++P
Sbjct: 10 VTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGT 69
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
A KYG+ SIPT+ ++ GE ++I+GA PK+ + L+ ++
Sbjct: 70 AAKYGVMSIPTLNVYQGGEVAKTIVGAKPKAAIVRDLEDFI 110
>pdb|3DYR|A Chain A, Crystal Structure Of E. Coli Thioredoxin Mutant I76t In
Its Oxidized Form
pdb|3DYR|B Chain B, Crystal Structure Of E. Coli Thioredoxin Mutant I76t In
Its Oxidized Form
Length = 111
Score = 114 bits (284), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 67/98 (68%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
+TD S++ V+ ++ +LV+FWA WCGPC+MIAP ++E+A EY GK+ KLN D +P
Sbjct: 8 LTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGT 67
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
A KYGIR PT+L FKNGE + +GA+ K L LD
Sbjct: 68 APKYGIRGTPTLLLFKNGEVAATKVGALSKGQLKEFLD 105
>pdb|2H70|A Chain A, Crystal Structure Of Thioredoxin Mutant D9e In Hexagonal
(P61) Space Group
pdb|2H70|B Chain B, Crystal Structure Of Thioredoxin Mutant D9e In Hexagonal
(P61) Space Group
Length = 108
Score = 114 bits (284), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 68/98 (69%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
+T+ S++ V+ ++ +LV+FWA WCGPC+MIAP ++E+A EY GK+ KLN D +P
Sbjct: 7 LTEDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGT 66
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
A KYGIR IPT+L FKNGE + +GA+ K L LD
Sbjct: 67 APKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 104
>pdb|2O8V|B Chain B, Paps Reductase In A Covalent Complex With Thioredoxin C35a
Length = 128
Score = 113 bits (282), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 67/98 (68%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
+TD S++ V+ ++ +LV+FWA WCGP +MIAP ++E+A EY GK+ KLN D +P
Sbjct: 27 LTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPGT 86
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
A KYGIR IPT+L FKNGE + +GA+ K L LD
Sbjct: 87 APKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 124
>pdb|2FD3|A Chain A, Crystal Structure Of Thioredoxin Mutant P34h
pdb|2FD3|B Chain B, Crystal Structure Of Thioredoxin Mutant P34h
Length = 108
Score = 113 bits (282), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 67/98 (68%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
+TD S++ V+ ++ +LV+FWA WCG C+MIAP ++E+A EY GK+ KLN D +P
Sbjct: 7 LTDDSFDTDVLKADGAILVDFWAEWCGHCKMIAPILDEIADEYQGKLTVAKLNIDQNPGT 66
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
A KYGIR IPT+L FKNGE + +GA+ K L LD
Sbjct: 67 APKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 104
>pdb|1F6M|C Chain C, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|D Chain D, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|G Chain G, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|H Chain H, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
Length = 108
Score = 112 bits (281), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 67/98 (68%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
+TD S++ V+ ++ +LV+FWA WCGP +MIAP ++E+A EY GK+ KLN D +P
Sbjct: 7 LTDDSFDTDVLKADGAILVDFWAEWCGPSKMIAPILDEIADEYQGKLTVAKLNIDQNPGT 66
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
A KYGIR IPT+L FKNGE + +GA+ K L LD
Sbjct: 67 APKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 104
>pdb|1KEB|A Chain A, Crystal Structure Of Double Mutant M37l,P40s E.Coli
Thioredoxin
pdb|1KEB|B Chain B, Crystal Structure Of Double Mutant M37l,P40s E.Coli
Thioredoxin
Length = 108
Score = 111 bits (278), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 67/98 (68%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
+TD S++ V+ ++ +LV+FWA WCGPC++IA ++E+A EY GK+ KLN D +P
Sbjct: 7 LTDDSFDTDVLKADGAILVDFWAEWCGPCKLIASILDEIADEYQGKLTVAKLNIDQNPGT 66
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
A KYGIR IPT+L FKNGE + +GA+ K L LD
Sbjct: 67 APKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 104
>pdb|1THO|A Chain A, Crystal Structure Of A Mutant Escherichia Coli Thioredoxin
With An Arginine Insertion In The Active Site
Length = 109
Score = 111 bits (277), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 68/99 (68%), Gaps = 1/99 (1%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCG-PCRMIAPAIEELAKEYAGKVACFKLNTDDSPN 139
+TD S++ V+ ++ +LV+FWA WCG PC+MIAP ++E+A EY GK+ KLN D +P
Sbjct: 7 LTDDSFDTDVLKADGAILVDFWAEWCGRPCKMIAPILDEIADEYQGKLTVAKLNIDQNPG 66
Query: 140 IATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
A KYGIR IPT+L FKNGE + +GA+ K L LD
Sbjct: 67 TAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 105
>pdb|1SRX|A Chain A, Three-Dimensional Structure Of Escherichia Coli
Thioredoxin-S2 To 2.8 Angstroms Resolution
Length = 108
Score = 108 bits (269), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 66/98 (67%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
+TD S++ ++ ++ +LV+FWA WCGPC+MIAP ++E+A EY GK+ KLN D +P
Sbjct: 7 LTDDSFDTDLVKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGT 66
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
A KY R IPT+L FKNGE + +GA+ K L LD
Sbjct: 67 APKYIERGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 104
>pdb|1TXX|A Chain A, Active-Site Variant Of E.Coli Thioredoxin
Length = 108
Score = 107 bits (267), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 66/98 (67%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
+TD S++ V+ ++ +LV+FWA WC C+MIAP ++E+A EY GK+ KLN D +P
Sbjct: 7 LTDDSFDTDVLKADGAILVDFWAEWCVWCKMIAPILDEIADEYQGKLTVAKLNIDQNPGT 66
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
A KYGIR IPT+L FKNGE + +GA+ K L LD
Sbjct: 67 APKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 104
>pdb|1RQM|A Chain A, Solution Structure Of The K18gR82E ALICYCLOBACILLUS
Acidocaldarius Thioredoxin Mutant
Length = 105
Score = 107 bits (266), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
+TD++++ I + PVLV+FWA WCGPCRM+AP +EE A+ +A KV KLN D++P
Sbjct: 5 LTDANFQQ-AIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPET 63
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTL 177
+++GI SIPT++ FK GE + +IG PK L + L
Sbjct: 64 TSQFGIMSIPTLILFKGGEPVKQLIGYQPKEQLEAQL 100
>pdb|1NW2|A Chain A, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|B Chain B, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|C Chain C, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|D Chain D, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|E Chain E, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|F Chain F, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|G Chain G, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|H Chain H, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
Length = 105
Score = 106 bits (265), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
+TD++++ I + PVLV+FWA WCGPCRM+AP +EE A+ +A KV KLN D++P
Sbjct: 5 LTDANFQQ-AIQGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPET 63
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTL 177
+++GI SIPT++ FK GE + +IG PK L + L
Sbjct: 64 TSQFGIMSIPTLILFKGGEPVKQLIGYQPKEQLEAQL 100
>pdb|1OAZ|A Chain A, Ige Fv Spe7 Complexed With A Recombinant Thioredoxin
pdb|1OAZ|B Chain B, Ige Fv Spe7 Complexed With A Recombinant Thioredoxin
Length = 123
Score = 106 bits (264), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 68/112 (60%), Gaps = 14/112 (12%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGP--------------CRMIAPAIEELAKEYAGK 126
+TD S++ V+ ++ +LV+FWA WCGP C+MIAP ++E+A EY GK
Sbjct: 8 LTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGK 67
Query: 127 VACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
+ KLN D +P A KYGIR IPT+L FKNGE + +GA+ K L LD
Sbjct: 68 LTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 119
>pdb|2O7K|A Chain A, S. Aureus Thioredoxin
Length = 107
Score = 106 bits (264), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 70/101 (69%), Gaps = 2/101 (1%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
VTD+ +++ V S LV+FWA WCGPC+MIAP +EELA +Y GK KL+ D++P+
Sbjct: 9 VTDADFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPST 66
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
A KY + SIPT++ FK+G+ + ++G PK L+ LDK++
Sbjct: 67 AAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 107
>pdb|1ZCP|A Chain A, Crystal Structure Of A Catalytic Site Mutant E. Coli Trxa
(Caca)
pdb|1ZCP|B Chain B, Crystal Structure Of A Catalytic Site Mutant E. Coli Trxa
(Caca)
pdb|1ZCP|C Chain C, Crystal Structure Of A Catalytic Site Mutant E. Coli Trxa
(Caca)
pdb|1ZCP|D Chain D, Crystal Structure Of A Catalytic Site Mutant E. Coli Trxa
(Caca)
Length = 108
Score = 106 bits (264), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 65/98 (66%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
+TD S++ V+ ++ +LV+FWA WC +MIAP ++E+A EY GK+ KLN D +P
Sbjct: 7 LTDDSFDTDVLKADGAILVDFWAEWCACAKMIAPILDEIADEYQGKLTVAKLNIDQNPGT 66
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
A KYGIR IPT+L FKNGE + +GA+ K L LD
Sbjct: 67 APKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 104
>pdb|2I4A|A Chain A, Crystal Structure Of Thioredoxin From The Acidophile
Acetobacter Aceti
Length = 107
Score = 105 bits (262), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 67/95 (70%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
V+DSS++ V+ + VLV+FWA WCGPC+MI PA+ E+ KE+AGKV K+N DD+P
Sbjct: 7 VSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPET 66
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSS 175
Y +RSIPT++ ++G+ + +GA+PKS L +
Sbjct: 67 PNAYQVRSIPTLMLVRDGKVIDKKVGALPKSQLKA 101
>pdb|1NSW|A Chain A, The Crystal Structure Of The K18g Mutant Of The
Thioredoxin From Alicyclobacillus Acidocaldarius
pdb|1NSW|B Chain B, The Crystal Structure Of The K18g Mutant Of The
Thioredoxin From Alicyclobacillus Acidocaldarius
pdb|1NSW|C Chain C, The Crystal Structure Of The K18g Mutant Of The
Thioredoxin From Alicyclobacillus Acidocaldarius
pdb|1NSW|D Chain D, The Crystal Structure Of The K18g Mutant Of The
Thioredoxin From Alicyclobacillus Acidocaldarius
Length = 105
Score = 105 bits (261), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
+TD++++ I + PVLV+FWA WCGPCRM+AP +EE A+ +A KV KLN D++P
Sbjct: 5 LTDANFQQ-AIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPET 63
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTL 177
+++GI SIPT++ FK G + +IG PK L + L
Sbjct: 64 TSQFGIMSIPTLILFKGGRPVKQLIGYQPKEQLEAQL 100
>pdb|1QUW|A Chain A, Solution Structure Of The Thioredoxin From Bacillus
Acidocaldarius
Length = 105
Score = 104 bits (260), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
+TD++++ I + PVLV+FWA WCGPCRM+AP +EE A+ +A KV KLN D++P
Sbjct: 5 LTDANFQQ-AIQGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPET 63
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTL 177
+++GI SIPT++ FK G + +IG PK L + L
Sbjct: 64 TSQFGIMSIPTLILFKGGRPVKQLIGYQPKEQLEAQL 100
>pdb|2O85|A Chain A, S. Aureus Thioredoxin P31t Mutant
Length = 107
Score = 103 bits (256), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 69/101 (68%), Gaps = 2/101 (1%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
VTD+ +++ V S LV+FWA WCG C+MIAP +EELA +Y GK KL+ D++P+
Sbjct: 9 VTDADFDSKVESGVQ--LVDFWATWCGTCKMIAPVLEELAADYEGKADILKLDVDENPST 66
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
A KY + SIPT++ FK+G+ + ++G PK L+ LDK++
Sbjct: 67 AAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 107
>pdb|2O87|A Chain A, S. Aureus Thioredoxin P31s Mutant
Length = 106
Score = 103 bits (256), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 69/101 (68%), Gaps = 2/101 (1%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
VTD+ +++ V S LV+FWA WCG C+MIAP +EELA +Y GK KL+ D++P+
Sbjct: 8 VTDADFDSKVESGVQ--LVDFWATWCGSCKMIAPVLEELAADYEGKADILKLDVDENPST 65
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
A KY + SIPT++ FK+G+ + ++G PK L+ LDK++
Sbjct: 66 AAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 106
>pdb|2CVK|A Chain A, Crystal Structure Of Thermus Thermophilus Thioredoxin
Length = 110
Score = 102 bits (254), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 71/102 (69%), Gaps = 3/102 (2%)
Query: 81 VTDSSWENLVISSENP-VLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPN 139
VTD +++ + ++P VLV+FWA WC PCR IAP +EE+AKEY GK+ KL+ D++P
Sbjct: 7 VTDQNFDETL--GQHPLVLVDFWAEWCAPCRXIAPILEEIAKEYEGKLLVAKLDVDENPK 64
Query: 140 IATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
A +Y + SIPTV+ FK+G+ E ++GA PK + ++K++
Sbjct: 65 TAXRYRVXSIPTVILFKDGQPVEVLVGAQPKRNYQAKIEKHL 106
>pdb|2YZU|A Chain A, Crystal Structure Of Oxidized Thioredoxin From Thermus
Thermophilus Hb8
Length = 109
Score = 102 bits (254), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 71/102 (69%), Gaps = 3/102 (2%)
Query: 81 VTDSSWENLVISSENP-VLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPN 139
VTD +++ + ++P VLV+FWA WC PCR IAP +EE+AKEY GK+ KL+ D++P
Sbjct: 6 VTDQNFDETL--GQHPLVLVDFWAEWCAPCRXIAPILEEIAKEYEGKLLVAKLDVDENPK 63
Query: 140 IATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
A +Y + SIPTV+ FK+G+ E ++GA PK + ++K++
Sbjct: 64 TAXRYRVXSIPTVILFKDGQPVEVLVGAQPKRNYQAKIEKHL 105
>pdb|3DIE|A Chain A, Domain Swapping Of Staphylococcus Aureus Thioredoxin W28a
Mutant
pdb|3DIE|B Chain B, Domain Swapping Of Staphylococcus Aureus Thioredoxin W28a
Mutant
Length = 106
Score = 102 bits (254), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 69/101 (68%), Gaps = 2/101 (1%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
VTD+ +++ V S LV+FWA CGPC+MIAP +EELA +Y GK KL+ D++P+
Sbjct: 8 VTDADFDSKVESGVQ--LVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPST 65
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
A KY + SIPT++ FK+G+ + ++G PK L+ LDK++
Sbjct: 66 AAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 106
>pdb|1V98|A Chain A, Crystal Structure Analysis Of Thioredoxin From Thermus
Thermophilus
pdb|1V98|B Chain B, Crystal Structure Analysis Of Thioredoxin From Thermus
Thermophilus
Length = 140
Score = 100 bits (250), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 62/85 (72%)
Query: 98 LVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKN 157
LV+F+APWCGPCR+++P +EELA+++AG++ K+N D+ P +A +YG+RS+PT++ F+
Sbjct: 54 LVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDEHPGLAARYGVRSVPTLVLFRR 113
Query: 158 GEKKESIIGAVPKSTLSSTLDKYVE 182
G + +GA P+ L L Y+E
Sbjct: 114 GAPVATWVGASPRRVLEERLRPYLE 138
>pdb|2L4Q|A Chain A, Solution Structures Of Oxidized And Reduced Thioredoxin C
From M. Tb
pdb|2L59|A Chain A, Solution Structures Of Oxidized And Reduced Thioredoxin C
From M. Tb
Length = 116
Score = 100 bits (249), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 66/101 (65%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
VTD+S+ V+SS PVLV+FWA WCGPC+M+AP +EE+A E A + KL+ D +P
Sbjct: 12 VTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPET 71
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
A + + SIPT++ FK+G+ + I+GA K+ L L V
Sbjct: 72 ARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVV 112
>pdb|3HHV|A Chain A, The Crystal Structure Of The Thioredoxin A2 From
Sulfolobus Solfataricus
Length = 110
Score = 99.8 bits (247), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 65/92 (70%), Gaps = 1/92 (1%)
Query: 91 ISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIP 150
I+ V+V+FWA WC PC ++AP IEELA +Y +VA KLNT++S +IA +YGI S+P
Sbjct: 20 ITKNKIVVVDFWAEWCAPCLILAPVIEELANDYP-QVAFGKLNTEESQDIAMRYGIMSLP 78
Query: 151 TVLFFKNGEKKESIIGAVPKSTLSSTLDKYVE 182
T++FFKNGE + I+GAVP+ + L +E
Sbjct: 79 TIMFFKNGELVDQILGAVPREEIEVRLKSLLE 110
>pdb|2O89|A Chain A, S. Aureus Thioredoxin P31tC32S MUTANT
Length = 107
Score = 99.8 bits (247), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 68/101 (67%), Gaps = 2/101 (1%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
VTD+ +++ V S LV+FWA WCG +MIAP +EELA +Y GK KL+ D++P+
Sbjct: 9 VTDADFDSKVESGVQ--LVDFWATWCGTSKMIAPVLEELAADYEGKADILKLDVDENPST 66
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
A KY + SIPT++ FK+G+ + ++G PK L+ LDK++
Sbjct: 67 AAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 107
>pdb|2I1U|A Chain A, Mycobacterium Tuberculosis Thioredoxin C
Length = 121
Score = 99.8 bits (247), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 66/101 (65%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
VTD+S+ V+SS PVLV+FWA WCGPC+M+AP +EE+A E A + KL+ D +P
Sbjct: 17 VTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPET 76
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
A + + SIPT++ FK+G+ + I+GA K+ L L V
Sbjct: 77 ARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVV 117
>pdb|2GZY|A Chain A, Solution Structures Of The Reduced Form Of Thioredoxin
From Bacillus Subtilis
pdb|2GZZ|A Chain A, Solution Structures Of The Oxidized Form Of Thioredoxin
From Bacillus Subtilis
Length = 104
Score = 99.0 bits (245), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 61/90 (67%)
Query: 92 SSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPT 151
+SE VL +FWAPWCGPC+MIAP +EEL +E K+ K++ D++ A KYG+ SIPT
Sbjct: 15 TSEGVVLADFWAPWCGPCKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPT 74
Query: 152 VLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
+L K+GE E+ +G PK L ++K++
Sbjct: 75 LLVLKDGEVVETSVGFKPKEALQELVNKHL 104
>pdb|2E0Q|A Chain A, Crystal Structure Of K53e Thioredoxin From Sulfolobus
Tokodaii Strain7
Length = 104
Score = 97.4 bits (241), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 63/84 (75%), Gaps = 1/84 (1%)
Query: 91 ISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIP 150
++S +V+FWA WC PC ++AP IEELA++Y +V KLN+D++P+IA +YG+ S+P
Sbjct: 13 LASHEIAVVDFWAEWCAPCLILAPIIEELAEDYP-QVGFGKLNSDENPDIAARYGVMSLP 71
Query: 151 TVLFFKNGEKKESIIGAVPKSTLS 174
TV+FFK+GE + IIGAVP+ +
Sbjct: 72 TVIFFKDGEPVDEIIGAVPREEIE 95
>pdb|3NOF|A Chain A, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant
pdb|3NOF|B Chain B, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant
pdb|3O6T|A Chain A, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant In
Complex With Quinol Inhibitor Pmx464
pdb|3O6T|B Chain B, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant In
Complex With Quinol Inhibitor Pmx464
pdb|3O6T|C Chain C, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant In
Complex With Quinol Inhibitor Pmx464
pdb|3O6T|D Chain D, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant In
Complex With Quinol Inhibitor Pmx464
Length = 118
Score = 97.1 bits (240), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 65/101 (64%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
VTD+S+ V+SS PVLV+FWA WCGP +M+AP +EE+A E A + KL+ D +P
Sbjct: 14 VTDASFATDVLSSNKPVLVDFWATWCGPSKMVAPVLEEIATERATDLTVAKLDVDTNPET 73
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
A + + SIPT++ FK+G+ + I+GA K+ L L V
Sbjct: 74 ARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVV 114
>pdb|2IPA|A Chain A, Solution Structure Of Trx-Arsc Complex
Length = 104
Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 60/90 (66%)
Query: 92 SSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPT 151
+SE VL +FWAPWCGP +MIAP +EEL +E K+ K++ D++ A KYG+ SIPT
Sbjct: 15 TSEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPT 74
Query: 152 VLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
+L K+GE E+ +G PK L ++K++
Sbjct: 75 LLVLKDGEVVETSVGFKPKEALQELVNKHL 104
>pdb|3P2A|A Chain A, Crystal Structure Of Thioredoxin 2 From Yersinia Pestis
pdb|3P2A|B Chain B, Crystal Structure Of Thioredoxin 2 From Yersinia Pestis
pdb|3P2A|C Chain C, Crystal Structure Of Thioredoxin 2 From Yersinia Pestis
pdb|3P2A|D Chain D, Crystal Structure Of Thioredoxin 2 From Yersinia Pestis
Length = 148
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 62/92 (67%)
Query: 90 VISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSI 149
++ + P +++FWAPWCGPCR AP E A E AGKV K+NT+ P ++T++ IRSI
Sbjct: 51 LLQDDLPXVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEPALSTRFRIRSI 110
Query: 150 PTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
PT+ ++NG+ + + GAVPK+ + LD+ +
Sbjct: 111 PTIXLYRNGKXIDXLNGAVPKAPFDNWLDEQL 142
>pdb|2L5L|A Chain A, Solution Structure Of Thioredoxin From Bacteroides
Vulgatus
Length = 136
Score = 94.0 bits (232), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 62/90 (68%)
Query: 92 SSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPT 151
+ P +V+F+A WCGPC+M+AP ++ELAKEY G++ +K++T+ +A +GIRSIP+
Sbjct: 36 EGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQELAGAFGIRSIPS 95
Query: 152 VLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
+LF K E GA+PK++ +D+++
Sbjct: 96 ILFIPMEGKPEMAQGAMPKASFKKAIDEFL 125
>pdb|2VOC|A Chain A, Thioredoxin A Active Site Mutants Form Mixed Disulfide
Dimers That Resemble Enzyme-substrate Reaction
Intermediate
pdb|2VOC|B Chain B, Thioredoxin A Active Site Mutants Form Mixed Disulfide
Dimers That Resemble Enzyme-substrate Reaction
Intermediate
Length = 112
Score = 94.0 bits (232), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 58/88 (65%)
Query: 92 SSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPT 151
+SE VL +FWAPWCGP +MIAP +EEL +E K+ K++ D++ A KYG+ SIPT
Sbjct: 15 TSEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPT 74
Query: 152 VLFFKNGEKKESIIGAVPKSTLSSTLDK 179
+L K+GE E+ +G PK L ++K
Sbjct: 75 LLVLKDGEVVETSVGFKPKEALQELVNK 102
>pdb|3HXS|A Chain A, Crystal Structure Of Bacteroides Fragilis Trxp
pdb|3HXS|B Chain B, Crystal Structure Of Bacteroides Fragilis Trxp
Length = 141
Score = 93.6 bits (231), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 59/87 (67%)
Query: 93 SENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTV 152
+ P +V+F+A WCGPC+M+AP +EEL+KEYAGK+ +K+N D P +A +GI+SIPT+
Sbjct: 50 GDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPELARDFGIQSIPTI 109
Query: 153 LFFKNGEKKESIIGAVPKSTLSSTLDK 179
F + + +GA+ K L +DK
Sbjct: 110 WFVPMKGEPQVNMGALSKEQLKGYIDK 136
>pdb|3HYP|A Chain A, Crystal Structure Of Bacteroides Fragilis Trxp_s105g
Mutant
pdb|3HYP|B Chain B, Crystal Structure Of Bacteroides Fragilis Trxp_s105g
Mutant
Length = 141
Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 58/87 (66%)
Query: 93 SENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTV 152
+ P +V+F+A WCGPC+M+AP +EEL+KEYAGK+ +K+N D P +A +GI+ IPT+
Sbjct: 50 GDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPELARDFGIQGIPTI 109
Query: 153 LFFKNGEKKESIIGAVPKSTLSSTLDK 179
F + + +GA+ K L +DK
Sbjct: 110 WFVPMKGEPQVNMGALSKEQLKGYIDK 136
>pdb|2J23|A Chain A, Cross-Reactivity And Crystal Structure Of Malassezia
Sympodialis Thioredoxin (Mala S 13), A Member Of A New
Pan- Allergen Family
pdb|2J23|B Chain B, Cross-Reactivity And Crystal Structure Of Malassezia
Sympodialis Thioredoxin (Mala S 13), A Member Of A New
Pan- Allergen Family
Length = 121
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 76 NEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAG-KVACFKLNT 134
VQV++ V + V+++FWA WCGPC+MI P E+++ AG KV +K++
Sbjct: 15 GSVQVISSYDQFKQVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDV 74
Query: 135 DDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKY 180
D+ IA + GIR++PT +FFKNG+K ++++GA P S L + + ++
Sbjct: 75 DEQSQIAQEVGIRAMPTFVFFKNGQKIDTVVGADP-SKLQAAITQH 119
>pdb|3TCO|A Chain A, Crystallographic And Spectroscopic Characterization Of
Sulfolobus Solfataricus Trxa1 Provide Insights Into The
Determinants Of Thioredoxin Fold Stability
pdb|3TCO|B Chain B, Crystallographic And Spectroscopic Characterization Of
Sulfolobus Solfataricus Trxa1 Provide Insights Into The
Determinants Of Thioredoxin Fold Stability
pdb|3TCO|C Chain C, Crystallographic And Spectroscopic Characterization Of
Sulfolobus Solfataricus Trxa1 Provide Insights Into The
Determinants Of Thioredoxin Fold Stability
Length = 109
Score = 90.9 bits (224), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 69/103 (66%), Gaps = 1/103 (0%)
Query: 80 VVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPN 139
V+T+ +++ VI + VLV+ WA WC PC + P +++A++Y GK +LN D++
Sbjct: 8 VLTEENFDE-VIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQK 66
Query: 140 IATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYVE 182
IA KY + +IPT L F NG+ +S++GAV + TL ST++KY++
Sbjct: 67 IADKYSVLNIPTTLIFVNGQLVDSLVGAVDEDTLESTVNKYLK 109
>pdb|1M7T|A Chain A, Solution Structure And Dynamics Of The Human-Escherichia
Coli Thioredoxin Chimera: Insights Into Thermodynamic
Stability
Length = 107
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Query: 87 ENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGI 146
E L + + V+V+F A WCGPC+MI P L+++Y+ V +++ DD+ ++A KYGI
Sbjct: 13 EALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYS-NVIFLEVDVDDAQDVAPKYGI 71
Query: 147 RSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
R IPT+L FKNGE + +GA+ K L LD
Sbjct: 72 RGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 103
>pdb|1UVZ|A Chain A, Structure Of Human Thioredoxin 2
pdb|1UVZ|B Chain B, Structure Of Human Thioredoxin 2
pdb|1UVZ|C Chain C, Structure Of Human Thioredoxin 2
pdb|1UVZ|D Chain D, Structure Of Human Thioredoxin 2
pdb|1UVZ|E Chain E, Structure Of Human Thioredoxin 2
pdb|1UVZ|F Chain F, Structure Of Human Thioredoxin 2
pdb|1W4V|A Chain A, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|B Chain B, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|C Chain C, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|D Chain D, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|E Chain E, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|F Chain F, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W89|A Chain A, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|B Chain B, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|C Chain C, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|D Chain D, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|E Chain E, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|F Chain F, Structure Of The Reduced Form Of Human Thioredoxin 2
Length = 119
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 62/97 (63%)
Query: 85 SWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKY 144
+++ V++SE PV+V+F A WCGPC+++ P +E++ + GKV K++ DD ++A +Y
Sbjct: 22 DFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEY 81
Query: 145 GIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
+ ++PTVL KNG+ + +G + L + L K +
Sbjct: 82 EVSAVPTVLAMKNGDVVDKFVGIKDEDQLEAFLKKLI 118
>pdb|2FA4|A Chain A, Crystal Structure Of Oxidized Form From Saccharomyces
Cerevisiae
pdb|2FA4|B Chain B, Crystal Structure Of Oxidized Form From Saccharomyces
Cerevisiae
Length = 111
Score = 83.2 bits (204), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
Query: 79 QVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSP 138
Q+ + S +++ + S + V+V+F+A WCGPC+MIAP IE+ A++Y+ A +KL+ D+
Sbjct: 11 QLKSASEYDSALASGDKLVVVDFFATWCGPCKMIAPMIEKFAEQYS-DAAFYKLDVDEVS 69
Query: 139 NIATKYGIRSIPTVLFFKNGEKKESIIGAVPKS 171
++A K + S+PT++F+K G++ ++GA P +
Sbjct: 70 DVAQKAEVSSMPTLIFYKGGKEVTRVVGANPAA 102
>pdb|2HSY|A Chain A, Solution Structure Of Thioredoxin 2 From Saccharomyces
Cerevisiae
Length = 104
Score = 83.2 bits (204), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
Query: 79 QVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSP 138
Q+ + S +++ + S + V+V+F+A WCGPC+MIAP IE+ A++Y+ A +KL+ D+
Sbjct: 4 QLKSASEYDSALASGDKLVVVDFFATWCGPCKMIAPMIEKFAEQYS-DAAFYKLDVDEVS 62
Query: 139 NIATKYGIRSIPTVLFFKNGEKKESIIGAVPKS 171
++A K + S+PT++F+K G++ ++GA P +
Sbjct: 63 DVAQKAEVSSMPTLIFYKGGKEVTRVVGANPAA 95
>pdb|1THX|A Chain A, Thioredoxin-2
Length = 115
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 59/104 (56%)
Query: 78 VQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDS 137
V +TD+ +E+ V+ +E PVLV FWA WCGPC++++P I A Y+ ++ KL D +
Sbjct: 9 VITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPN 68
Query: 138 PNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
P KY + +P + K + +S G + K L S LD ++
Sbjct: 69 PTTVKKYKVEGVPALRLVKGEQILDSTEGVISKDKLLSFLDTHL 112
>pdb|4DSS|B Chain B, Crystal Structure Of Peroxiredoxin Ahp1 From Saccharomyces
Cerevisiae In Complex With Thioredoxin Trx2
Length = 112
Score = 79.7 bits (195), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 63/91 (69%), Gaps = 1/91 (1%)
Query: 79 QVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSP 138
Q+ + S +++ + S + V+V+F+A WCGP +MIAP IE+ A++Y+ A +KL+ D+
Sbjct: 12 QLKSASEYDSALASGDKLVVVDFFATWCGPSKMIAPMIEKFAEQYS-DAAFYKLDVDEVS 70
Query: 139 NIATKYGIRSIPTVLFFKNGEKKESIIGAVP 169
++A K + S+PT++F+K G++ ++GA P
Sbjct: 71 DVAQKAEVSSMPTLIFYKGGKEVTRVVGANP 101
>pdb|3PIN|A Chain A, Crystal Structure Of Mxr1 From Saccharomyces Cerevisiae In
Complex With Trx2
Length = 104
Score = 79.7 bits (195), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 63/91 (69%), Gaps = 1/91 (1%)
Query: 79 QVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSP 138
Q+ + S +++ + S + V+V+F+A WCGP +MIAP IE+ A++Y+ A +KL+ D+
Sbjct: 4 QLKSASEYDSALASGDKLVVVDFFATWCGPSKMIAPMIEKFAEQYS-DAAFYKLDVDEVS 62
Query: 139 NIATKYGIRSIPTVLFFKNGEKKESIIGAVP 169
++A K + S+PT++F+K G++ ++GA P
Sbjct: 63 DVAQKAEVSSMPTLIFYKGGKEVTRVVGANP 93
>pdb|1XWA|A Chain A, Drospohila Thioredoxin, Oxidized, P41212
pdb|1XWA|B Chain B, Drospohila Thioredoxin, Oxidized, P41212
pdb|1XWA|C Chain C, Drospohila Thioredoxin, Oxidized, P41212
pdb|1XWA|D Chain D, Drospohila Thioredoxin, Oxidized, P41212
Length = 111
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 53/83 (63%)
Query: 88 NLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIR 147
L +S V+++F+A WCGPC+MI+P + EL+ ++A V K++ D+ +IA +Y I
Sbjct: 19 QLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNIS 78
Query: 148 SIPTVLFFKNGEKKESIIGAVPK 170
S+PT +F KNG K E GA K
Sbjct: 79 SMPTFVFLKNGVKVEEFAGANAK 101
>pdb|1XW9|A Chain A, Drospohila Thioredoxin, Oxidized, P21
pdb|1XW9|B Chain B, Drospohila Thioredoxin, Oxidized, P21
pdb|1XW9|C Chain C, Drospohila Thioredoxin, Oxidized, P21
pdb|1XW9|D Chain D, Drospohila Thioredoxin, Oxidized, P21
pdb|1XWB|A Chain A, Drospohila Thioredoxin, Oxidized, P42212
pdb|1XWB|B Chain B, Drospohila Thioredoxin, Oxidized, P42212
pdb|1XWB|C Chain C, Drospohila Thioredoxin, Oxidized, P42212
pdb|1XWB|D Chain D, Drospohila Thioredoxin, Oxidized, P42212
pdb|1XWC|A Chain A, Drosophila Thioredoxin, Reduced, P6522
Length = 106
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 53/83 (63%)
Query: 88 NLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIR 147
L +S V+++F+A WCGPC+MI+P + EL+ ++A V K++ D+ +IA +Y I
Sbjct: 14 QLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNIS 73
Query: 148 SIPTVLFFKNGEKKESIIGAVPK 170
S+PT +F KNG K E GA K
Sbjct: 74 SMPTFVFLKNGVKVEEFAGANAK 96
>pdb|2PPT|A Chain A, Crystal Structure Of Thioredoxin-2
pdb|2PPT|B Chain B, Crystal Structure Of Thioredoxin-2
Length = 155
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 46/78 (58%)
Query: 96 PVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFF 155
P+LV+FWAPWCGPCR +AP + A AG+V K++T P +A ++ I+ IP + F
Sbjct: 66 PLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHPAVAGRHRIQGIPAFILF 125
Query: 156 KNGEKKESIIGAVPKSTL 173
G + GA P S L
Sbjct: 126 HKGRELARAAGARPASEL 143
>pdb|2I9H|A Chain A, Nmr Solution Structure Of The Reduced Form Of Thioredoxin
1 From Yeast (Trx1)
Length = 103
Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 63/93 (67%), Gaps = 2/93 (2%)
Query: 79 QVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSP 138
Q T S +++ I+ + V+V+F+A WCGPC+MIAP IE+ +++Y + +KL+ D+
Sbjct: 4 QFKTASEFDS-AIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP-QADFYKLDVDELG 61
Query: 139 NIATKYGIRSIPTVLFFKNGEKKESIIGAVPKS 171
++A K + ++PT+L FKNG++ ++GA P +
Sbjct: 62 DVAQKNEVSAMPTLLLFKNGKEVAKVVGANPAA 94
>pdb|3F3Q|A Chain A, Crystal Structure Of The Oxidised Form Of Thioredoxin 1
From Saccharomyces Cerevisiae
Length = 109
Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 63/93 (67%), Gaps = 2/93 (2%)
Query: 79 QVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSP 138
Q T S +++ I+ + V+V+F+A WCGPC+MIAP IE+ +++Y + +KL+ D+
Sbjct: 10 QFKTASEFDS-AIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP-QADFYKLDVDELG 67
Query: 139 NIATKYGIRSIPTVLFFKNGEKKESIIGAVPKS 171
++A K + ++PT+L FKNG++ ++GA P +
Sbjct: 68 DVAQKNEVSAMPTLLLFKNGKEVAKVVGANPAA 100
>pdb|1WMJ|A Chain A, Solution Structure Of Thioredoxin Type H From Oryza Sativa
Length = 130
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 97 VLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFK 156
V+++F A WCGPCR IAP E AK++ G V K++ D+ +A KY + ++PT LF K
Sbjct: 39 VIIDFTASWCGPCRFIAPVFAEYAKKFPGAV-FLKVDVDELKEVAEKYNVEAMPTFLFIK 97
Query: 157 NGEKKESIIGAVPKSTLSSTLDKYV 181
+G + + ++GA K L +T+ K+V
Sbjct: 98 DGAEADKVVGA-RKDDLQNTIVKHV 121
>pdb|2VM1|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Ammonium Sulfate As Precipitant
pdb|2VM1|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Ammonium Sulfate As Precipitant
pdb|2VM1|C Chain C, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Ammonium Sulfate As Precipitant
pdb|2VM1|D Chain D, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Ammonium Sulfate As Precipitant
pdb|2VM2|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Peg As Precipitant
pdb|2VM2|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Peg As Precipitant
pdb|2VM2|C Chain C, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Peg As Precipitant
pdb|2VM2|D Chain D, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Peg As Precipitant
Length = 118
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 97 VLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFK 156
V+++F A WCGPCR+IAP E AK++ G + K++ D+ ++A Y + ++PT LF K
Sbjct: 31 VIIDFTASWCGPCRVIAPVFAEYAKKFPGAI-FLKVDVDELKDVAEAYNVEAMPTFLFIK 89
Query: 157 NGEKKESIIGA 167
+GEK +S++G
Sbjct: 90 DGEKVDSVVGG 100
>pdb|3F3R|A Chain A, Crystal Structure Of Yeast Thioredoxin1-Glutathione Mixed
Disulfide Complex
pdb|3F3R|B Chain B, Crystal Structure Of Yeast Thioredoxin1-Glutathione Mixed
Disulfide Complex
Length = 109
Score = 73.6 bits (179), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Query: 79 QVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSP 138
Q T S +++ I+ + V+V+F+A WCGP +MIAP IE+ +++Y + +KL+ D+
Sbjct: 10 QFKTASEFDS-AIAQDKLVVVDFYATWCGPSKMIAPMIEKFSEQYP-QADFYKLDVDELG 67
Query: 139 NIATKYGIRSIPTVLFFKNGEKKESIIGAVPKS 171
++A K + ++PT+L FKNG++ ++GA P +
Sbjct: 68 DVAQKNEVSAMPTLLLFKNGKEVAKVVGANPAA 100
>pdb|1SYR|A Chain A, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|B Chain B, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|C Chain C, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|D Chain D, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|E Chain E, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|F Chain F, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|G Chain G, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|H Chain H, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|I Chain I, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|J Chain J, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|K Chain K, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|L Chain L, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
Length = 112
Score = 73.6 bits (179), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Query: 78 VQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDS 137
V++VT + + +IS V+V+F+A WCGPC+ IAP EE +K Y K+ K++ D+
Sbjct: 10 VKIVTSQAEFDSIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYT-KMVFIKVDVDEV 68
Query: 138 PNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKY 180
+ K I S+PT +KNG ++++GA S L ++KY
Sbjct: 69 SEVTEKENITSMPTFKVYKNGSSVDTLLGA-NDSALKQLIEKY 110
>pdb|3ZZX|A Chain A, Crystallographic Structure Of Thioredoxin From Litopenaeus
Vannamei
pdb|3ZZX|B Chain B, Crystallographic Structure Of Thioredoxin From Litopenaeus
Vannamei
Length = 105
Score = 73.2 bits (178), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 97 VLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFK 156
V+++F+A WCGPC+MIAP +EEL++ + V K++ D+ +IA I +PT LF K
Sbjct: 23 VVIDFYATWCGPCKMIAPKLEELSQSMSD-VVFLKVDVDECEDIAQDNQIACMPTFLFMK 81
Query: 157 NGEKKESIIGA 167
NG+K +S+ GA
Sbjct: 82 NGQKLDSLSGA 92
>pdb|3QDN|A Chain A, Putative Thioredoxin Protein From Salmonella Typhimurium
pdb|3QDN|B Chain B, Putative Thioredoxin Protein From Salmonella Typhimurium
Length = 287
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%)
Query: 87 ENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGI 146
+ L S PVL FW+ C + P +E LA +Y G+ KL+ D IA ++G+
Sbjct: 19 QTLEQSXTTPVLFYFWSERSQHCLQLTPVLESLAAQYHGQFILAKLDCDAEQXIAAQFGL 78
Query: 147 RSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDK 179
R+IPTV F+NG+ + G P+ + + LDK
Sbjct: 79 RAIPTVYLFQNGQPVDGFQGPQPEEAIRALLDK 111
>pdb|1XFL|A Chain A, Solution Structure Of Thioredoxin H1 From Arabidopsis
Thaliana
Length = 124
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 58/89 (65%), Gaps = 2/89 (2%)
Query: 93 SENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTV 152
S+ V+V+F A WCGPCR IAP +LAK+ V K++TD+ ++A+ + I+++PT
Sbjct: 37 SKTLVVVDFTASWCGPCRFIAPFFADLAKKLPN-VLFLKVDTDELKSVASDWAIQAMPTF 95
Query: 153 LFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
+F K G+ + ++GA K L ST+ K++
Sbjct: 96 MFLKEGKILDKVVGA-KKDELQSTIAKHL 123
>pdb|2XBI|A Chain A, Crystal Structure Of Schistosoma Mansoni Thioredoxin At
1.6 Angstrom
Length = 108
Score = 69.7 bits (169), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 57/92 (61%), Gaps = 5/92 (5%)
Query: 78 VQVVTDSSWENLVISSENP-VLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACF-KLNTD 135
+++ D E+L+ +N V+V+F+A WCGPC+ IAP +EL+++Y A F K++ D
Sbjct: 7 IELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKYD---AIFVKVDVD 63
Query: 136 DSPNIATKYGIRSIPTVLFFKNGEKKESIIGA 167
A KY I ++PT + KNGEK ++GA
Sbjct: 64 KLEETARKYNISAMPTFIAIKNGEKVGDVVGA 95
>pdb|1EP7|A Chain A, Crystal Structure Of Wt Thioredoxin H From Chlamydomonas
Reinhardtii
pdb|1EP7|B Chain B, Crystal Structure Of Wt Thioredoxin H From Chlamydomonas
Reinhardtii
pdb|1TOF|A Chain A, Thioredoxin H (Oxidized Form), Nmr, 23 Structures
Length = 112
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%)
Query: 94 ENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVL 153
P++V+F A WCGPC+MIAP E L+ +YAGKV K++ D +A GI ++PT
Sbjct: 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITAMPTFH 83
Query: 154 FFKNGEKKESIIGA 167
+K+G K + ++GA
Sbjct: 84 VYKDGVKADDLVGA 97
>pdb|2VLT|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 2 In The
Oxidized State
pdb|2VLT|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 2 In The
Oxidized State
pdb|2VLU|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 2 In
Partially Radiation-Reduced State
pdb|2VLU|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 2 In
Partially Radiation-Reduced State
pdb|2VLV|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 2 In
Partially Radiation-Reduced State
pdb|2VLV|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 2 In
Partially Radiation-Reduced State
Length = 122
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 92 SSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPT 151
+++ V+++F A WCGPCR++AP +LAK++ V K++ D+ IA ++ + ++PT
Sbjct: 32 TAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPNAV-FLKVDVDELKPIAEQFSVEAMPT 90
Query: 152 VLFFKNGEKKESIIGAV 168
LF K G+ K+ ++GA+
Sbjct: 91 FLFMKEGDVKDRVVGAI 107
>pdb|2XBQ|A Chain A, Crystal Structure Of Reduced Schistosoma Mansoni
Thioredoxin Pre-Protein At 1.7 Angstrom
pdb|2XBQ|B Chain B, Crystal Structure Of Reduced Schistosoma Mansoni
Thioredoxin Pre-Protein At 1.7 Angstrom
pdb|2XC2|A Chain A, Crystal Structure Of Oxidized Schistosoma Mansoni
Thioredoxin Pre-Protein At 1.6 Angstrom
Length = 117
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 57/92 (61%), Gaps = 5/92 (5%)
Query: 78 VQVVTDSSWENLVISSENP-VLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACF-KLNTD 135
+++ D E+L+ +N V+V+F+A WCGPC+ IAP +EL+++Y A F K++ D
Sbjct: 16 IELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKYD---AIFVKVDVD 72
Query: 136 DSPNIATKYGIRSIPTVLFFKNGEKKESIIGA 167
A KY I ++PT + KNGEK ++GA
Sbjct: 73 KLEETARKYNISAMPTFIAIKNGEKVGDVVGA 104
>pdb|3QOU|A Chain A, Crystal Structure Of E. Coli Ybbn
Length = 287
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%)
Query: 92 SSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPT 151
S PVL FW+ C + P +E LA +Y G+ KL+ D IA ++G+R+IPT
Sbjct: 24 SMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPT 83
Query: 152 VLFFKNGEKKESIIGAVPKSTLSSTLD 178
V F+NG+ + G P+ + + LD
Sbjct: 84 VYLFQNGQPVDGFQGPQPEEAIRALLD 110
>pdb|1EP8|A Chain A, Crystal Structure Of A Mutated Thioredoxin, D30a, From
Chlamydomonas Reinhardtii
pdb|1EP8|B Chain B, Crystal Structure Of A Mutated Thioredoxin, D30a, From
Chlamydomonas Reinhardtii
Length = 112
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%)
Query: 94 ENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVL 153
P++V F A WCGPC+MIAP E L+ +YAGKV K++ D +A GI ++PT
Sbjct: 24 HKPIVVAFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITAMPTFH 83
Query: 154 FFKNGEKKESIIGA 167
+K+G K + ++GA
Sbjct: 84 VYKDGVKADDLVGA 97
>pdb|3M9J|A Chain A, Crystal Structure Of Human Thioredoxin C6973S DOUBLE
MUTANT, REDUCED Form
pdb|3M9J|B Chain B, Crystal Structure Of Human Thioredoxin C6973S DOUBLE
MUTANT, REDUCED Form
pdb|3M9K|A Chain A, Crystal Structure Of Human Thioredoxin C6973S
DOUBLE-Mutant, Oxidized Form
pdb|3M9K|B Chain B, Crystal Structure Of Human Thioredoxin C6973S
DOUBLE-Mutant, Oxidized Form
Length = 105
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 87 ENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGI 146
E L + + V+V+F A WCGPC+MI P L+++Y+ V +++ DD ++A++ +
Sbjct: 13 EALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASESEV 71
Query: 147 RSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
+S+PT FFK G+K GA K L +T+++ V
Sbjct: 72 KSMPTFQFFKKGQKVGEFSGA-NKEKLEATINELV 105
>pdb|2HSH|A Chain A, Crystal Structure Of C73s Mutant Of Human Thioredoxin-1
Oxidized With H2o2
pdb|1ERV|A Chain A, Human Thioredoxin Mutant With Cys 73 Replaced By Ser
(Reduced Form)
Length = 105
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 87 ENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGI 146
E L + + V+V+F A WCGPC+MI P L+++Y+ V +++ DD ++A++ +
Sbjct: 13 EALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASECEV 71
Query: 147 RSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
+S+PT FFK G+K GA K L +T+++ V
Sbjct: 72 KSMPTFQFFKKGQKVGEFSGA-NKEKLEATINELV 105
>pdb|1TRS|A Chain A, The High-Resolution Three-Dimensional Solution Structures
Of The Oxidized And Reduced States Of Human Thioredoxin
pdb|1TRU|A Chain A, The High-Resolution Three-Dimensional Solution Structures
Of The Oxidized And Reduced States Of Human Thioredoxin
pdb|1TRV|A Chain A, The High-resolution Three-dimensional Solution Structures
Of The Oxidized And Reduced States Of Human Thioredoxin
pdb|1TRW|A Chain A, The High-Resolution Three-Dimensional Solution Structures
Of The Oxidized And Reduced States Of Human Thioredoxin
Length = 105
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 87 ENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGI 146
E L + + V+V+F A WCGPC+MI P L+++Y+ V +++ DD+ ++A++ +
Sbjct: 13 EALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDDAQDVASEAEV 71
Query: 147 RSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
++ PT FFK G+K GA K L +T+++ V
Sbjct: 72 KATPTFQFFKKGQKVGEFSGA-NKEKLEATINELV 105
>pdb|2VIM|A Chain A, X-Ray Structure Of Fasciola Hepatica Thioredoxin
Length = 104
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Query: 97 VLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFK 156
++V+F+A WCGPCR IAP +E LAKE +V K++ D + A KY + ++PT +F K
Sbjct: 22 IVVDFFAQWCGPCRNIAPKVEALAKEIP-EVEFAKVDVDQNEEAAAKYSVTAMPTFVFIK 80
Query: 157 NGEKKESIIGAVPKSTLSSTLDKY 180
+G++ + GA ++ L T+ ++
Sbjct: 81 DGKEVDRFSGA-NETKLRETITRH 103
>pdb|1X5D|A Chain A, The Solution Structure Of The Second Thioredoxin-Like
Domain Of Human Protein Disulfide-Isomerase A6
Length = 133
Score = 66.6 bits (161), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 62/112 (55%), Gaps = 5/112 (4%)
Query: 76 NEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAP----AIEELAKEYAGKVACFK 131
+V +TD S++ V+ SE+ +VEF+APWCG C+ + P A E+ ++ GKV
Sbjct: 7 GDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAA 66
Query: 132 LNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTL-SSTLDKYVE 182
++ + +A++YGIR PT+ F+ GE G +S + S LD + +
Sbjct: 67 VDATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVSRALDLFSD 118
>pdb|3KD0|A Chain A, Human Thioredoxin C35s,C62s,C69s,C73s Mutant Showing
Cadmium Chloride Bound To The Active Site
Length = 105
Score = 66.6 bits (161), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 87 ENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGI 146
E L + + V+V+F A WCGP +MI P L+++Y+ V +++ DDS ++A++ +
Sbjct: 13 EALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVDDSQDVASESEV 71
Query: 147 RSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
+S+PT FFK G+K GA K L +T+++ V
Sbjct: 72 KSMPTFQFFKKGQKVGEFSGA-NKEKLEATINELV 105
>pdb|2IWT|A Chain A, Thioredoxin H2 (Hvtrxh2) In A Mixed Disulfide Complex With
The Target Protein Basi
Length = 125
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 92 SSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPT 151
+++ V+++F A WCGP R++AP +LAK++ V K++ D+ IA ++ + ++PT
Sbjct: 35 TAKKLVVIDFTASWCGPSRIMAPVFADLAKKFPNAV-FLKVDVDELKPIAEQFSVEAMPT 93
Query: 152 VLFFKNGEKKESIIGAV 168
LF K G+ K+ ++GA+
Sbjct: 94 FLFMKEGDVKDRVVGAI 110
>pdb|2IFQ|A Chain A, Crystal Structure Of S-Nitroso Thioredoxin
pdb|2IFQ|C Chain C, Crystal Structure Of S-Nitroso Thioredoxin
Length = 105
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 87 ENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGI 146
E L + + V+V+F A WCGPC+MI P L+++Y+ V +++ DD ++A++ +
Sbjct: 13 EALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASEXEV 71
Query: 147 RSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
+ +PT FFK G+K GA K L +T+++ V
Sbjct: 72 KCMPTFQFFKKGQKVGEFSGA-NKEKLEATINELV 105
>pdb|2IFQ|B Chain B, Crystal Structure Of S-Nitroso Thioredoxin
pdb|1AUC|A Chain A, Human Thioredoxin (Oxidized With Diamide)
pdb|1ERT|A Chain A, Human Thioredoxin (Reduced Form)
pdb|1ERU|A Chain A, Human Thioredoxin (Oxidized Form)
Length = 105
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 87 ENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGI 146
E L + + V+V+F A WCGPC+MI P L+++Y+ V +++ DD ++A++ +
Sbjct: 13 EALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASECEV 71
Query: 147 RSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
+ +PT FFK G+K GA K L +T+++ V
Sbjct: 72 KCMPTFQFFKKGQKVGEFSGA-NKEKLEATINELV 105
>pdb|2ALB|A Chain A, Nmr Structure Of The N-Terminal Domain A Of The
Glycoprotein Chaperone Erp57
Length = 113
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 2/106 (1%)
Query: 76 NEVQVVTDSSWENLV--ISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLN 133
++V +TD ++E+ + S +LVEF+APWCG C+ +AP E A G V K++
Sbjct: 1 SDVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVD 60
Query: 134 TDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDK 179
+ N KYG+ PT+ F++GE+ + G + S L K
Sbjct: 61 CTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKK 106
>pdb|2WZ9|A Chain A, Crystal Structure Of The Thioredoxin Domain Of Human Txnl2
Length = 153
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 87 ENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGI 146
E L + +++ ++V FWAPW C + + ELAKE +V+ KL + P ++ KY I
Sbjct: 25 ELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP-QVSFVKLEAEGVPEVSEKYEI 83
Query: 147 RSIPTVLFFKNGEKKESIIGA 167
S+PT LFFKN +K + + GA
Sbjct: 84 SSVPTFLFFKNSQKIDRLDGA 104
>pdb|3TRX|A Chain A, High-Resolution Three-Dimensional Structure Of Reduced
Recombinant Human Thioredoxin In Solution
pdb|4TRX|A Chain A, High-Resolution Three-Dimensional Structure Of Reduced
Recombinant Human Thioredoxin In Solution
Length = 105
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Query: 87 ENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGI 146
E L + + V+V+F A WCGPC+MI P L+++Y+ V +++ DD ++A++ +
Sbjct: 13 EALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASECEV 71
Query: 147 RSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
+ PT FFK G+K GA K L +T+++ V
Sbjct: 72 KCTPTFQFFKKGQKVGEFSGA-NKEKLEATINELV 105
>pdb|3HZ4|A Chain A, Crystal Structure Of Thioredoxin From Methanosarcina Mazei
pdb|3HZ4|B Chain B, Crystal Structure Of Thioredoxin From Methanosarcina Mazei
Length = 140
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%)
Query: 83 DSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIAT 142
D +W V S+ PV+V F++P C C+ P EE AKEY ++N +P A
Sbjct: 13 DXTWSQQVEDSKKPVVVXFYSPACPYCKAXEPYFEEYAKEYGSSAVFGRINIATNPWTAE 72
Query: 143 KYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTL 177
KYG++ PT FF +G +G + S L + +
Sbjct: 73 KYGVQGTPTFKFFCHGRPVWEQVGQIYPSILKNAV 107
>pdb|2DIY|A Chain A, The Solution Structure Of The Thioredoxin Domain Of Human
Thioredoxin-Like Protein 2
Length = 130
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 87 ENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGI 146
E L + +++ ++V FWAPW C + + ELAKE +V+ KL + P ++ KY I
Sbjct: 31 ELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP-QVSFVKLEAEGVPEVSEKYEI 89
Query: 147 RSIPTVLFFKNGEKKESIIGA 167
S+PT LFFKN +K + + GA
Sbjct: 90 SSVPTFLFFKNSQKIDRLDGA 110
>pdb|1MDI|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Mutant Human Thioredoxin And A 13
Residue Peptide Comprising Its Target Site In Human Nfkb
pdb|1MDJ|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Human Thioredoxin (c35a, C62a,
C69a, C73a) Mutant And A 13 Residue Peptide Comprising
Its Target Site In Human Nfkb (residues 56-68 Of The P50
Subunit Of Nfkb)
pdb|1MDK|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Human Thioredoxin (C35a, C62a,
C69a, C73a) Mutant And A 13 Residue Peptide Comprising
Its Target Site In Human Nfkb (Residues 56-68 Of The P50
Subunit Of Nfkb)
pdb|1CQH|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Human Thioredoxin (C35a, C62a,
C69a, C73a) Mutant And A 13 Residue Peptide Comprising
Its Target Site In Human Ref-1 (Residues 59-71 Of The
P50 Subunit Of Nfkb), Nmr, Minimized Average Structure
pdb|1CQG|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Human Thioredoxin (C35a, C62a,
C69a, C73a) Mutant And A 13 Residue Peptide Comprising
Its Target Site In Human Ref-1 (Residues 59-71 Of The
P50 Subunit Of Nfkb), Nmr, 31 Structures
Length = 105
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 87 ENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGI 146
E L + + V+V+F A WCGP +MI P L+++Y+ V +++ DD+ ++A++ +
Sbjct: 13 EALDAAGDKLVVVDFSATWCGPAKMIKPFFHSLSEKYSN-VIFLEVDVDDAQDVASEAEV 71
Query: 147 RSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
++ PT FFK G+K GA K L +T+++ V
Sbjct: 72 KATPTFQFFKKGQKVGEFSGA-NKEKLEATINELV 105
>pdb|3QFA|C Chain C, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFA|D Chain D, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|C Chain C, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|D Chain D, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
Length = 116
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 87 ENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGI 146
E L + + V+V+F A WCGP +MI P L+++Y+ V +++ DD ++A++ +
Sbjct: 24 EALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASECEV 82
Query: 147 RSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
+S+PT FFK G+K GA K L +T+++ V
Sbjct: 83 KSMPTFQFFKKGQKVGEFSGA-NKEKLEATINELV 116
>pdb|2OE0|A Chain A, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae
pdb|2OE0|B Chain B, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae
pdb|2OE1|A Chain A, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae (Reduced Form)
pdb|2OE1|B Chain B, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae (Reduced Form)
pdb|2OE3|A Chain A, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae (Oxidized Form)
pdb|2OE3|B Chain B, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae (Oxidized Form)
Length = 114
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Query: 84 SSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATK 143
+ + NL I + ++++F+A WCGPC+M+ P + +L + Y V K + D+SP+IA +
Sbjct: 21 TEFRNL-IKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYP-DVRFVKCDVDESPDIAKE 78
Query: 144 YGIRSIPTVLFFKNGEKKESIIGAVPKS 171
+ ++PT + K+G+ IIGA P +
Sbjct: 79 CEVTAMPTFVLGKDGQLIGKIIGANPTA 106
>pdb|2DJ3|A Chain A, The Solution Structure Of The Third Thioredoxin Domain Of
Mouse Protein Disulfide-Isomerase A4
Length = 133
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 78 VQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDS 137
V+VV +++ +V+ + VL+EF+APWCG C+ + P L K+Y G+ D +
Sbjct: 9 VKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDAT 68
Query: 138 PNIAT--KYGIRSIPTVLFFKNGEKKESI 164
N T +Y + PT+ F +G+KK I
Sbjct: 69 ANDITNDQYKVEGFPTIYFAPSGDKKNPI 97
>pdb|1AIU|A Chain A, Human Thioredoxin (D60n Mutant, Reduced Form)
Length = 105
Score = 63.2 bits (152), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 87 ENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGI 146
E L + + V+V+F A WCGPC+MI P L+++Y+ V +++ +D ++A++ +
Sbjct: 13 EALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVNDCQDVASECEV 71
Query: 147 RSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
+ +PT FFK G+K GA K L +T+++ V
Sbjct: 72 KCMPTFQFFKKGQKVGEFSGA-NKEKLEATINELV 105
>pdb|1MEK|A Chain A, Human Protein Disulfide Isomerase, Nmr, 40 Structures
Length = 120
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 71 AREAVNEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELA---KEYAGKV 127
A E + V V+ S++ +++ +LVEF+APWCG C+ +AP + A K ++
Sbjct: 2 APEEEDHVLVLRKSNFAE-ALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEI 60
Query: 128 ACFKLNTDDSPNIATKYGIRSIPTVLFFKNGE 159
K++ + ++A +YG+R PT+ FF+NG+
Sbjct: 61 RLAKVDATEESDLAQQYGVRGYPTIKFFRNGD 92
>pdb|2DIZ|A Chain A, The Solution Structure Of The Third Thioredoxin Domain Of
Human Thioredoxin Domain-Containing Protein 5
Length = 117
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 53/86 (61%), Gaps = 5/86 (5%)
Query: 78 VQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDD- 136
V +T++++++ + +E ++F+APWCG C+ +AP EEL+K+ +A K+ D
Sbjct: 9 VLALTENNFDDTI--AEGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDC 66
Query: 137 --SPNIATKYGIRSIPTVLFFKNGEK 160
NI +KY +R PT+L F+ G+K
Sbjct: 67 TAERNICSKYSVRGYPTLLLFRGGKK 92
>pdb|3UJ1|A Chain A, Crystal Structure Of The Third Thioredoxin Domain Of Human
Erp46
Length = 110
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 53/86 (61%), Gaps = 5/86 (5%)
Query: 78 VQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDD- 136
V +T++++++ + +E ++F+APWCG C+ +AP EEL+K+ +A K+ D
Sbjct: 2 VLALTENNFDDTI--AEGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDC 59
Query: 137 --SPNIATKYGIRSIPTVLFFKNGEK 160
NI +KY +R PT+L F+ G+K
Sbjct: 60 TAERNICSKYSVRGYPTLLLFRGGKK 85
>pdb|3UVT|A Chain A, Crystal Structure Of The Third Catalytic Domain Of Erp46
pdb|3UVT|B Chain B, Crystal Structure Of The Third Catalytic Domain Of Erp46
pdb|3UVT|C Chain C, Crystal Structure Of The Third Catalytic Domain Of Erp46
pdb|3UVT|D Chain D, Crystal Structure Of The Third Catalytic Domain Of Erp46
pdb|3UVT|E Chain E, Crystal Structure Of The Third Catalytic Domain Of Erp46
Length = 111
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 53/86 (61%), Gaps = 5/86 (5%)
Query: 78 VQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDD- 136
V +T++++++ + +E ++F+APWCG C+ +AP EEL+K+ +A K+ D
Sbjct: 7 VLALTENNFDDTI--AEGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDC 64
Query: 137 --SPNIATKYGIRSIPTVLFFKNGEK 160
NI +KY +R PT+L F+ G+K
Sbjct: 65 TAERNICSKYSVRGYPTLLLFRGGKK 90
>pdb|3E3E|A Chain A, Human Thioredoxin Double Mutant C35s,C73r
pdb|3E3E|B Chain B, Human Thioredoxin Double Mutant C35s,C73r
Length = 105
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Query: 87 ENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGI 146
E L + + V+V+F A WCGP +MI P L+++Y+ V +++ DD ++A++ +
Sbjct: 13 EALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASECEV 71
Query: 147 RSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
+ +PT FFK G+K GA K L +T+++ V
Sbjct: 72 KRMPTFQFFKKGQKVGEFSGA-NKEKLEATINELV 105
>pdb|3APS|A Chain A, Crystal Structure Of Trx4 Domain Of Erdj5
pdb|3APS|B Chain B, Crystal Structure Of Trx4 Domain Of Erdj5
Length = 122
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
+T ++ V+ + +V+F+APWCGPC+ AP E LA+ GKV K++ P
Sbjct: 8 LTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQT 67
Query: 141 ATKYGIRSIPTVLFFKNGEKKESI 164
K GI++ P+V ++ K+SI
Sbjct: 68 CQKAGIKAYPSVKLYQYERAKKSI 91
>pdb|1TI3|A Chain A, Solution Structure Of The Thioredoxin H1 From Poplar, A
Cppc Active Site Variant
Length = 113
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 92 SSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPT 151
S+ ++V+F A WC PC+MIAP ELAK++ V K++ D+ +A ++ + ++PT
Sbjct: 24 GSQKLIVVDFTASWCPPCKMIAPIFAELAKKFPN-VTFLKVDVDELKAVAEEWNVEAMPT 82
Query: 152 VLFFKNGEKKESIIGAVPKSTLSSTLDKY 180
+F K+G+ + +GA K L + + K+
Sbjct: 83 FIFLKDGKLVDKTVGA-DKDGLPTLVAKH 110
>pdb|3VFI|A Chain A, Crystal Structure Of A Metagenomic Thioredoxin
Length = 104
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 52/96 (54%)
Query: 78 VQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDS 137
++ ++DS ++ V +P+++ F WC PC+ + P EE+A + G + ++ +D+
Sbjct: 1 LRSLSDSDFQLEVRQHPDPIIIMFTGSWCQPCKKMKPTFEEMASQMEGDIRFAYMDAEDA 60
Query: 138 PNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTL 173
+ IR++P++ F +G +E G + KS L
Sbjct: 61 EKTMAELNIRTLPSLALFVDGMIREVFSGTMNKSDL 96
>pdb|3F8U|A Chain A, TapasinERP57 HETERODIMER
pdb|3F8U|C Chain C, TapasinERP57 HETERODIMER
Length = 481
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Query: 77 EVQVVTDSSWENLV--ISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNT 134
+V +TD ++E+ + S +LVEF+APWCG + +AP E A G V K++
Sbjct: 2 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGIVPLAKVDC 61
Query: 135 DDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDK 179
+ N KYG+ PT+ F++GE+ + G + S L K
Sbjct: 62 TANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKK 106
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 78 VQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDS 137
V+VV +++ +V + VL+EF+APWCG C+ + P +EL ++ + D +
Sbjct: 354 VKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDAT 413
Query: 138 PN-IATKYGIRSIPTVLF 154
N + + Y +R PT+ F
Sbjct: 414 ANDVPSPYEVRGFPTIYF 431
>pdb|2DJ1|A Chain A, The Solution Structure Of The First Thioredoxin Domain Of
Mouse Protein Disulfide-Isomerase A4
Length = 140
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 76 NEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELA---KEYAGKVACFKL 132
N V V+ D +++N V + ++ VL+EF+APWCG C+ AP E++A K+ +A K+
Sbjct: 17 NGVWVLNDGNFDNFV-ADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKI 75
Query: 133 NTDDSPNIATKYGIRSIPTVLFFKNGE 159
+ + +A+K+ + PT+ K G+
Sbjct: 76 DATSASMLASKFDVSGYPTIKILKKGQ 102
>pdb|1ERW|A Chain A, Human Thioredoxin Double Mutant With Cys 32 Replaced By
Ser And Cys 35 Replaced By Ser
Length = 105
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 87 ENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGI 146
E L + + V+V+F A W GP +MI P L+++Y+ V +++ DD ++A++ +
Sbjct: 13 EALDAAGDKLVVVDFSATWSGPSKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASECEV 71
Query: 147 RSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
+ +PT FFK G+K GA K L +T+++ V
Sbjct: 72 KCMPTFQFFKKGQKVGEFSGA-NKEKLEATINELV 105
>pdb|1FAA|A Chain A, Crystal Structure Of Thioredoxin F From Spinach
Chloroplast (Long Form)
Length = 124
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 6/101 (5%)
Query: 79 QVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLN-TDDS 137
+V D+ W + + + PV+++ + WCGPC+ +AP E+LA+EY V KL+ ++
Sbjct: 22 EVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL-DVIFLKLDCNQEN 80
Query: 138 PNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
+A + GIR +PT K S++G V + L+
Sbjct: 81 KTLAKELGIRVVPTFKILKEN----SVVGEVTGAKYDKLLE 117
>pdb|1F9M|A Chain A, Crystal Structure Of Thioredoxin F From Spinach
Chloroplast (Short Form)
pdb|1F9M|B Chain B, Crystal Structure Of Thioredoxin F From Spinach
Chloroplast (Short Form)
Length = 112
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 6/101 (5%)
Query: 79 QVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLN-TDDS 137
+V D+ W + + + PV+++ + WCGPC+ +AP E+LA+EY V KL+ ++
Sbjct: 10 EVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD-VIFLKLDCNQEN 68
Query: 138 PNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
+A + GIR +PT K S++G V + L+
Sbjct: 69 KTLAKELGIRVVPTFKILKEN----SVVGEVTGAKYDKLLE 105
>pdb|2DML|A Chain A, The Solution Structure Of The First Thioredoxin Domain Of
Mouse Protein Disulfide-Isomerase A6
Length = 130
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 76 NEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTD 135
++V +T S++ VI S+ LVEF+APWCG C+ + P ++ A V +N D
Sbjct: 17 DDVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNAD 76
Query: 136 DSPNIATKYGIRSIPTV-LFFKNGEKKESIIGA 167
++ +YG++ PT+ +F N K E G
Sbjct: 77 KHQSLGGQYGVQGFPTIKIFGANKNKPEDYQGG 109
>pdb|3IDV|A Chain A, Crystal Structure Of The A0a Fragment Of Erp72
Length = 241
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 76 NEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELA---KEYAGKVACFKL 132
N V V+ D++++N V + ++ VL+EF+APWCG C+ AP E++A K+ + K+
Sbjct: 15 NGVLVLNDANFDNFV-ADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKI 73
Query: 133 NTDDSPNIATKYGIRSIPTVLFFKNGE 159
+ + +A+++ + PT+ K G+
Sbjct: 74 DATSASVLASRFDVSGYPTIKILKKGQ 100
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 10/102 (9%)
Query: 67 ILCKAREAVN-------EVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEEL 119
I+ K RE EV +V + V++ + +LVEF+APWCG C+ +AP E+
Sbjct: 113 IVAKVREVSQPDWTPPPEVTLVLTKENFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKA 172
Query: 120 AKEYAGK---VACFKLNTDDSPNIATKYGIRSIPTVLFFKNG 158
AKE + + + K++ ++A ++ + PT+ F+ G
Sbjct: 173 AKELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTLKIFRKG 214
>pdb|2DJ2|A Chain A, The Solution Structure Of The Second Thioredoxin Domain Of
Mouse Protein Disulfide-Isomerase A4
Length = 120
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 90 VISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGK---VACFKLNTDDSPNIATKYGI 146
V+++ + +LVEF+APWCG C+ +AP E+ AKE + + + K++ + ++A ++ +
Sbjct: 20 VVNNADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATEQTDLAKRFDV 79
Query: 147 RSIPTVLFFKNGE 159
PT+ F+ G
Sbjct: 80 SGYPTLKIFRKGR 92
>pdb|2HXK|A Chain A, Crystal Structure Of S-Nitroso Thioredoxin
pdb|2HXK|B Chain B, Crystal Structure Of S-Nitroso Thioredoxin
pdb|2HXK|C Chain C, Crystal Structure Of S-Nitroso Thioredoxin
pdb|2IIY|A Chain A, Crystal Structure Of S-Nitroso Thioredoxin
Length = 105
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 87 ENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGI 146
E L + + V+V+F A WCGPC+MI P L+++Y+ V +++ DD ++A++ +
Sbjct: 13 EALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDDXQDVASEXEV 71
Query: 147 RSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
+ +PT FFK G+K GA K L +T+++ V
Sbjct: 72 KCMPTFQFFKKGQKVGEFSGA-NKEKLEATINELV 105
>pdb|2B5E|A Chain A, Crystal Structure Of Yeast Protein Disulfide Isomerase
pdb|3BOA|A Chain A, Crystal Structure Of Yeast Protein Disulfide Isomerase
Length = 504
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 87 ENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKL-NTDDSPNIATKYG 145
+ +V + VLV ++APWCG C+ +AP +ELA YA + + D + N
Sbjct: 369 DEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDVRGVV 428
Query: 146 IRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
I PT++ + G+K ES++ +S L S D
Sbjct: 429 IEGYPTIVLYPGGKKSESVVYQGSRS-LDSLFD 460
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 78 VQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGK-VACFKLNTDD 136
V++ TDS N I S + VL EF+APWCG C+ +AP + A+ K + +++ +
Sbjct: 17 VKLATDSF--NEYIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTE 74
Query: 137 SPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKST 172
+ ++ ++ I P++ FKN + SI P++
Sbjct: 75 NQDLCMEHNIPGFPSLKIFKNSDVNNSIDYEGPRTA 110
>pdb|3UEM|A Chain A, Crystal Structure Of Human Pdi Bb'a' Domains
Length = 361
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%)
Query: 78 VQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDS 137
V+V+ ++E++ + V VEF+APWCG C+ +AP ++L + Y D +
Sbjct: 251 VKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDST 310
Query: 138 PNIATKYGIRSIPTVLFF 155
N + S PT+ FF
Sbjct: 311 ANEVEAVKVHSFPTLKFF 328
>pdb|3D21|A Chain A, Crystal Structure Of A Poplar Wild-Type Thioredoxin H,
Pttrxh4
pdb|3D21|B Chain B, Crystal Structure Of A Poplar Wild-Type Thioredoxin H,
Pttrxh4
Length = 139
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 97 VLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFK 156
VL F A WCGPC+ IAP EL++ Y + ++ D+ + + + I++ PT F +
Sbjct: 49 VLANFSARWCGPCKQIAPYYIELSENYPS-LMFLVIDVDELSDFSASWEIKATPTFFFLR 107
Query: 157 NGEKKESIIGA 167
+G++ + ++GA
Sbjct: 108 DGQQVDKLVGA 118
>pdb|1X5C|A Chain A, The Solution Structure Of The Second Thioredoxin-Like
Domain Of Human Protein Disulfide-Isomerase
Length = 121
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%)
Query: 78 VQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDS 137
V+V+ ++E++ + V VEF+APWCG C+ +AP ++L + Y D +
Sbjct: 9 VKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDST 68
Query: 138 PNIATKYGIRSIPTVLFF 155
N + S PT+ FF
Sbjct: 69 ANEVEAVKVHSFPTLKFF 86
>pdb|3UL3|B Chain B, Structural Insights Into Thioredoxin-2: A Component Of
Malaria Parasite Protein Secretion Machinery
pdb|3UL3|A Chain A, Structural Insights Into Thioredoxin-2: A Component Of
Malaria Parasite Protein Secretion Machinery
Length = 128
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 91 ISSENPVLV-EFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSI 149
++ +N V+V F+A WC C M + +++L K Y ++ K++ D + ++A K+ ++S+
Sbjct: 38 VNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNESLARKFSVKSL 97
Query: 150 PTVLFFKN 157
PT++ KN
Sbjct: 98 PTIILLKN 105
>pdb|2DJJ|A Chain A, Solution Structure Of The A' Domain Of Thermophilic Fungal
Protein Disulfide Isomerase
pdb|2KP1|A Chain A, Solution Structure Of The A' Domain Of Thermophilic Fungal
Protein Disulfide Isomerase
Length = 121
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 12/94 (12%)
Query: 78 VQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGK-------VACF 130
V VV ++ +V+ VL+EF+APWCG C+ +AP EEL YA +A
Sbjct: 9 VTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKV 68
Query: 131 KLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESI 164
+D P+ I+ PT+ + G K + +
Sbjct: 69 DATANDVPD-----EIQGFPTIKLYPAGAKGQPV 97
>pdb|3APO|A Chain A, Crystal Structure Of Full-Length Erdj5
Length = 780
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
+T ++ V+ + +V+F+APW GP + AP E LA+ GKV K++ P
Sbjct: 662 LTPQTFNEKVLQGKTHWVVDFYAPWSGPSQNFAPEFELLARMIKGKVRAGKVDCQAYPQT 721
Query: 141 ATKYGIRSIPTVLFFKNGEKKESI 164
K GI++ P+V ++ K+SI
Sbjct: 722 CQKAGIKAYPSVKLYQYERAKKSI 745
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 67 ILCKAREAVNEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGK 126
IL A+E+VN VT +N S + P LV+F+APW P R + P + + + G+
Sbjct: 430 ILAFAKESVNSH--VTTLGPQNFPASDKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQ 487
Query: 127 VACFKLNTDDSPNIATKYGIRSIPTVLFF 155
+ L+ + Y I++ PT + F
Sbjct: 488 LKVGTLDCTIHEGLCNMYNIQAYPTTVVF 516
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 32/76 (42%)
Query: 98 LVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKN 157
V F++P +AP E AKE G + +N D + G+ S P++ F++
Sbjct: 137 FVNFYSPGSSHSHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYPSLFIFRS 196
Query: 158 GEKKESIIGAVPKSTL 173
G G K +L
Sbjct: 197 GMAAVKYNGDRSKESL 212
Score = 33.1 bits (74), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 11/58 (18%), Positives = 30/58 (51%)
Query: 98 LVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFF 155
+V+F++PW P +++ P + +A+ G + ++ + T+ ++ P + F+
Sbjct: 567 MVDFYSPWSHPSQVLMPEWKRMARTLTGLINVGSVDCGQYHSFCTQENVQRYPEIRFY 624
>pdb|2PU9|C Chain C, Crystal Srtucture Of The Binary Complex Between
Ferredoxin: Thioredoxin Reductase And Thioredoxin F
pdb|2PVO|C Chain C, Crystal Srtucture Of The Ternary Complex Between
Thioredoxin F, Ferredoxin, And Ferredoxin: Thioredoxin
Reductase
Length = 111
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 6/101 (5%)
Query: 79 QVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLN-TDDS 137
+V D+ W + + + PV+++ + WCGP + +AP E+LA+EY V KL+ ++
Sbjct: 9 EVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD-VIFLKLDCNQEN 67
Query: 138 PNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
+A + GIR +PT K S++G V + L+
Sbjct: 68 KTLAKELGIRVVPTFKILKEN----SVVGEVTGAKYDKLLE 104
>pdb|2F51|A Chain A, Structure Of Trichomonas Vaginalis Thioredoxin
pdb|2F51|B Chain B, Structure Of Trichomonas Vaginalis Thioredoxin
Length = 118
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 82 TDSSWENLVISSENPVLVEFWAPWCGPCR---MIAPAIEELAKEYAGKVACFKLNTDDSP 138
T + N + + VLV+F+A WCGPC+ I P+I E K+ V K++ D +
Sbjct: 11 THEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEANKD----VTFIKVDVDKNG 66
Query: 139 NIATKYGIRSIPTVLFFK 156
N A YG+ SIP + F K
Sbjct: 67 NAADAYGVSSIPALFFVK 84
>pdb|3D22|A Chain A, Crystal Structure Of A Poplar Thioredoxin H Mutant,
Pttrxh4c61s
Length = 139
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 97 VLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFK 156
VL F A WCGP R IAP EL++ Y + ++ D+ + + + I++ PT F +
Sbjct: 49 VLANFSARWCGPSRQIAPYYIELSENYPS-LMFLVIDVDELSDFSASWEIKATPTFFFLR 107
Query: 157 NGEKKESIIGA 167
+G++ + ++GA
Sbjct: 108 DGQQVDKLVGA 118
>pdb|1X5E|A Chain A, The Solution Structure Of The Thioredoxin-Like Domain Of
Human Thioredoxin-Related Transmembrane Protein
Length = 126
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 78 VQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAG-KVACFKLNTDD 136
V+V+TD +W L+ E ++EF+APWC C+ + P E A+ +V K++ +
Sbjct: 9 VRVITDENWRELL---EGDWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTE 65
Query: 137 SPNIATKYGIRSIPTVLFFKNGE 159
P ++ ++ I ++PT+ K+GE
Sbjct: 66 QPGLSGRFIINALPTIYHCKDGE 88
>pdb|3GNJ|A Chain A, The Crystal Structure Of A Thioredoxin-Related Protein
From Desulfitobacterium Hafniense Dcb
pdb|3GNJ|B Chain B, The Crystal Structure Of A Thioredoxin-Related Protein
From Desulfitobacterium Hafniense Dcb
pdb|3GNJ|C Chain C, The Crystal Structure Of A Thioredoxin-Related Protein
From Desulfitobacterium Hafniense Dcb
pdb|3GNJ|D Chain D, The Crystal Structure Of A Thioredoxin-Related Protein
From Desulfitobacterium Hafniense Dcb
Length = 111
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 44/94 (46%)
Query: 84 SSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATK 143
+++E L+ LV F C C+ + P +EEL Y + ++ ++ + +
Sbjct: 12 NTFEQLIYDEGKACLVXFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEKTLFQR 71
Query: 144 YGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTL 177
+ ++ +P +L+FK+GE K G V + +
Sbjct: 72 FSLKGVPQILYFKDGEYKGKXAGDVEDDEVEQXI 105
>pdb|2DMM|A Chain A, The Solution Structure Of The Second Thioredoxin Domain Of
Human Protein Disulfide-Isomerase A3
Length = 142
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 78 VQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDS 137
V+VV +++ +V + VL+EF+APWCG C+ + P +EL ++ + D +
Sbjct: 29 VKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDAT 88
Query: 138 PN-IATKYGIRSIPTVLF 154
N + + Y +R PT+ F
Sbjct: 89 ANDVPSPYEVRGFPTIYF 106
>pdb|3ED3|A Chain A, Crystal Structure Of The Yeast DithiolDISULFIDE
Oxidoreductase Mpd1p
pdb|3ED3|B Chain B, Crystal Structure Of The Yeast DithiolDISULFIDE
Oxidoreductase Mpd1p
Length = 298
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 77 EVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDD 136
+ +T S++ + ++ LVEF+APWCG C+ ++ + AK G V +N D
Sbjct: 18 HISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDL 77
Query: 137 SPNIA--TKYGIRSIPTVLFFK 156
+ N A KY + PT++ F+
Sbjct: 78 NKNKALCAKYDVNGFPTLMVFR 99
>pdb|1R26|A Chain A, Crystal Structure Of Thioredoxin From Trypanosoma Brucei
Brucei
Length = 125
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 91 ISSENPVLVE-FWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSI 149
I SE+ + V F A WCGPC+ I +E++A E+ V K++ D++ I +K + +
Sbjct: 33 IMSEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP-TVKFAKVDADNNSEIVSKCRVLQL 91
Query: 150 PTVLFFKNGEKKESIIGAVP 169
PT + ++G+ +IGA P
Sbjct: 92 PTFIIARSGKMLGHVIGANP 111
>pdb|2LJA|A Chain A, Solution Structure Of A Putative Thiol-Disulfide
Oxidoreductase From Bacteroides Vulgatus
Length = 152
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 97 VLVEFWAPWCGPCRMIAPAIEELAKEYAGK------VACFKLNTDDSPNIATKYGIRSIP 150
+ ++ WA WCGPCR PA++EL ++YAGK ++C K N N+ TK ++ I
Sbjct: 33 IYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDK-NKKAWENMVTKDQLKGIQ 91
Query: 151 TVLFFKNGEKKESIIGAVPKSTL 173
+ +I +P+ L
Sbjct: 92 LHMGTDRTFMDAYLINGIPRFIL 114
>pdb|3APQ|A Chain A, Crystal Structure Of J-Trx1 Fragment Of Erdj5
pdb|3APQ|B Chain B, Crystal Structure Of J-Trx1 Fragment Of Erdj5
Length = 210
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 34/76 (44%)
Query: 98 LVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKN 157
V F++P C C +AP E AKE G + +N D + G+ S P++ F++
Sbjct: 118 FVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYPSLFIFRS 177
Query: 158 GEKKESIIGAVPKSTL 173
G G K +L
Sbjct: 178 GMAAVKYNGDRSKESL 193
>pdb|2R2J|A Chain A, Crystal Structure Of Human Erp44
Length = 382
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 81 VTDSSWENL--VISSENPVLVEFWAPWCGPCRMIAPAIEE----LAKEY--AGKVACFKL 132
+T EN+ ++++ + LV F+A WC + + P EE + +E+ +V ++
Sbjct: 7 ITSLDTENIDEILNNADVALVNFYADWCRFSQXLHPIFEEASDVIKEEFPNENQVVFARV 66
Query: 133 NTDDSPNIATKYGIRSIPTVLFFKNG 158
+ D +IA +Y I PT+ F+NG
Sbjct: 67 DCDQHSDIAQRYRISKYPTLKLFRNG 92
>pdb|1FO5|A Chain A, Solution Structure Of Reduced Mj0307
Length = 85
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 101 FWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEK 160
F +P C C +EE+A E V +N ++P A +YGI ++PT++ NG+
Sbjct: 9 FTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENPQKAMEYGIMAVPTIVI--NGDV 66
Query: 161 KESIIGAVPKSTLSSTLDK 179
+ IGA K L + K
Sbjct: 67 E--FIGAPTKEALVEAIKK 83
>pdb|1GH2|A Chain A, Crystal Structure Of The Catalytic Domain Of A New Human
Thioredoxin-Like Protein
Length = 107
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 98 LVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKN 157
+V+F CGPC IAPA ++ +Y + +++ A I + PT FF+N
Sbjct: 25 VVKFTMRGCGPCLRIAPAFSSMSNKYP-QAVFLEVDVHQCQGTAATNNISATPTFQFFRN 83
Query: 158 GEKKESIIGA 167
+ + GA
Sbjct: 84 KVRIDQYQGA 93
>pdb|3CXG|A Chain A, Crystal Structure Of Plasmodium Falciparum Thioredoxin,
Pfi0790w
pdb|3CXG|B Chain B, Crystal Structure Of Plasmodium Falciparum Thioredoxin,
Pfi0790w
Length = 133
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 88 NLVISS--ENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYG 145
N V SS + ++++F A WC PC I + Y V ++ D P + ++
Sbjct: 32 NQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYYY--VTLVDIDVDIHPKLNDQHN 89
Query: 146 IRSIPTVLFFKN 157
I+++PT F+ N
Sbjct: 90 IKALPTFEFYFN 101
>pdb|1JFU|A Chain A, Crystal Structure Of The Soluble Domain Of Tlpa From
Bradyrhizobium Japonicum
pdb|1JFU|B Chain B, Crystal Structure Of The Soluble Domain Of Tlpa From
Bradyrhizobium Japonicum
Length = 186
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 97 VLVEFWAPWCGPCRMIAPAIEELAKEYAG---KVACFKLNTDD 136
+LV WA WC PCR PA++EL + +G +V ++T D
Sbjct: 63 LLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRD 105
>pdb|2KUC|A Chain A, Solution Structure Of A Putative Disulphide-Isomerase From
Bacteroides Thetaiotaomicron
Length = 130
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 97 VLVEFWAPWCGPCRMIAPAI--EELAKEYAGK-VACFKLNTDDSPNIA--TKYGIRSIPT 151
+ V+ + WCGPC+ ++ + + L +Y + K++ + + KYG+ + PT
Sbjct: 30 LFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGVHAYPT 89
Query: 152 VLFFK-NGEKKESIIGA 167
+LF +GE ++GA
Sbjct: 90 LLFINSSGEVVYRLVGA 106
>pdb|3GL3|A Chain A, Crystal Structure Of A Putative Thiol:disulfide
Interchange Protein Dsbe From Chlorobium Tepidum
pdb|3GL3|B Chain B, Crystal Structure Of A Putative Thiol:disulfide
Interchange Protein Dsbe From Chlorobium Tepidum
pdb|3GL3|C Chain C, Crystal Structure Of A Putative Thiol:disulfide
Interchange Protein Dsbe From Chlorobium Tepidum
pdb|3GL3|D Chain D, Crystal Structure Of A Putative Thiol:disulfide
Interchange Protein Dsbe From Chlorobium Tepidum
Length = 152
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Query: 97 VLVEFWAPWCGPCRMIAPAIEELAKEYAGK-VACFKLNTDDSPNIATKYGIRSIP---TV 152
V ++FWA WCGPCR P + +Y K +N D A K+ + +P TV
Sbjct: 31 VYLDFWASWCGPCRQSFPWXNQXQAKYKAKGFQVVAVNLDAKTGDAXKF-LAQVPAEFTV 89
Query: 153 LFFKNGE 159
F G+
Sbjct: 90 AFDPKGQ 96
>pdb|3T58|A Chain A, C76aC455S MUTANT OF MOUSE QSOX1 CONTAINING AN INTERDOMAIN
DISULFIDE
pdb|3T58|B Chain B, C76aC455S MUTANT OF MOUSE QSOX1 CONTAINING AN INTERDOMAIN
DISULFIDE
pdb|3T58|C Chain C, C76aC455S MUTANT OF MOUSE QSOX1 CONTAINING AN INTERDOMAIN
DISULFIDE
pdb|3T58|D Chain D, C76aC455S MUTANT OF MOUSE QSOX1 CONTAINING AN INTERDOMAIN
DISULFIDE
pdb|3T59|A Chain A, C76aC455S MUTANT OF MOUSE QSOX1 CONTAINING AN INTERDOMAIN
DISULFIDE
pdb|3T59|B Chain B, C76aC455S MUTANT OF MOUSE QSOX1 CONTAINING AN INTERDOMAIN
DISULFIDE
pdb|3T59|C Chain C, C76aC455S MUTANT OF MOUSE QSOX1 CONTAINING AN INTERDOMAIN
DISULFIDE
pdb|3T59|D Chain D, C76aC455S MUTANT OF MOUSE QSOX1 CONTAINING AN INTERDOMAIN
DISULFIDE
Length = 519
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 90 VISSENPVLVEFWAPWCGPCRMIAPAIEELAKEY-----AGKVACFKLNTDDSPNIATKY 144
V+ S + VEF+A WCG AP +ELA + A +A + + + ++
Sbjct: 26 VLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREF 85
Query: 145 GIRSIPTVLFFKNGEKKES 163
I PTV FF+ K S
Sbjct: 86 NIAGFPTVRFFQAFTKNGS 104
>pdb|3RAZ|A Chain A, The Crystal Structure Of Thioredoxin-Related Protein From
Neisseria Meningitidis Serogroup B
Length = 151
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 98 LVEFWAPWCGPCRMIAPAIEELAK-EYAGKVACFKLNTDDSPNIA 141
+V WA WCGPCR PA + K + G V + D S NI
Sbjct: 28 IVNLWATWCGPCRKEXPAXSKWYKAQKKGSVDXVGIALDTSDNIG 72
>pdb|3Q6O|A Chain A, Oxidoreductase Fragment Of Human Qsox1
Length = 244
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 90 VISSENPVLVEFWAPWCGPCRMIAPAIEELAKEY-----AGKVACFKLNTDDSPNIATKY 144
V+ S + VEF+A WCG C AP LA++ A +A + + + +
Sbjct: 26 VLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDF 85
Query: 145 GIRSIPTVLFF 155
I PTV FF
Sbjct: 86 NIPGFPTVRFF 96
>pdb|3D6I|A Chain A, Structure Of The Thioredoxin-Like Domain Of Yeast
Glutaredoxin 3
pdb|3D6I|B Chain B, Structure Of The Thioredoxin-Like Domain Of Yeast
Glutaredoxin 3
Length = 112
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 97 VLVEFWAPWCGPCRMIAPAIEELAKEYAG-KVACFKLNTDDSPNIATKYGIRSIPTVLFF 155
+++ F W PC+ + E ++ E + V+ ++ D++ I+ + I ++P +
Sbjct: 24 IVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSEISELFEISAVPYFIII 83
Query: 156 KNGEKKESIIGAVPKSTLS 174
G + + GA PK +S
Sbjct: 84 HKGTILKELSGADPKEYVS 102
>pdb|3KCM|A Chain A, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
pdb|3KCM|B Chain B, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
pdb|3KCM|C Chain C, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
pdb|3KCM|D Chain D, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
pdb|3KCM|E Chain E, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
pdb|3KCM|F Chain F, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
Length = 154
Score = 35.0 bits (79), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 17/30 (56%)
Query: 97 VLVEFWAPWCGPCRMIAPAIEELAKEYAGK 126
V+V FWA WC PCR P+ L AGK
Sbjct: 31 VIVNFWATWCPPCREEIPSXXRLNAAXAGK 60
>pdb|3HDC|A Chain A, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
Length = 158
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 21/93 (22%)
Query: 97 VLVEFWAPWCGPCRMIAPAIEELAK--------------------EYAGKVACFKLNTDD 136
VLV FWA WC CR P+ + L K +Y F +D
Sbjct: 44 VLVNFWASWCPYCRDEXPSXDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDA 103
Query: 137 SPNIATKYGIRSIP-TVLFFKNGEKKESIIGAV 168
+ + +YG +P T + + G ++ + G +
Sbjct: 104 TGQVQQRYGANRLPDTFIVDRKGIIRQRVTGGI 136
>pdb|2DJ0|A Chain A, The Solution Structure Of The Thioredoxin Domain Of Human
Thioredoxin-Related Transmembrane Protein 2
Length = 137
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 98 LVEFWAPWCGPCRMIAPAIEELAKEYAGKVACF-KLNTDDSPNIATKYGI------RSIP 150
+VEF+A W C+ AP +L+ +Y F K++ +++T+Y + + +P
Sbjct: 30 IVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPLTKQLP 89
Query: 151 TVLFFKNGEK 160
T++ F+ G++
Sbjct: 90 TLILFQGGKE 99
>pdb|4EVM|A Chain A, 1.5 Angstrom Crystal Structure Of Soluble Domain Of
Membrane-Anchored Thioredoxin Family Protein From
Streptococcus Pneumoniae Strain Canada Mdr_19a
Length = 138
Score = 34.3 bits (77), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 42/110 (38%), Gaps = 29/110 (26%)
Query: 97 VLVEFWAPWCGPCRMIAPAIEELAKEYAGKV----------------ACFK--------- 131
V ++FWA WC C P +E+AKE A FK
Sbjct: 25 VYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYK 84
Query: 132 ---LNTDDSPNIATKYGIRSIPTVLFF-KNGEKKESIIGAVPKSTLSSTL 177
+ D S + YG+RS PT F K G+ ++ G + K + TL
Sbjct: 85 NLPVLVDPSGKLLETYGVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTL 134
>pdb|1UC7|A Chain A, Crystal Structure Of Dsbdgamma
pdb|1UC7|B Chain B, Crystal Structure Of Dsbdgamma
Length = 125
Score = 33.5 bits (75), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 12/120 (10%)
Query: 69 CKAREAVNEVQVVT-DSSWENLVISSENPVLVEFWAPWCGPCRMIA------PAIEELAK 121
+ + +N Q+ T D + LV + PV+++ +A WC C+ P +++
Sbjct: 2 AQTQTHLNFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA 61
Query: 122 EYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKES----IIGAVPKSTLSSTL 177
+ A N + + +PT+LFF +G+ +E + G + T S+ L
Sbjct: 62 DTVLLQANVTANDAQDVALLKHLNVLGLPTILFF-DGQGQEHPQARVTGFMDAETFSAHL 120
>pdb|2FWE|A Chain A, Crystal Structure Of The C-Terminal Domain Of The Electron
Transfer Catalyst Dsbd (Oxidized Form)
pdb|2FWF|A Chain A, High Resolution Crystal Structure Of The C-Terminal Domain
Of The Electron Transfer Catalyst Dsbd (Reduced Form)
pdb|2FWG|A Chain A, High Resolution Crystal Structure Of The C-Terminal Domain
Of The Electron Transfer Catalyst Dsbd (Photoreduced
Form)
pdb|2FWH|A Chain A, Atomic Resolution Crystal Structure Of The C-Terminal
Domain Of The Electron Transfer Catalyst Dsbd (Reduced
Form At Ph7)
Length = 134
Score = 33.5 bits (75), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 12/120 (10%)
Query: 69 CKAREAVNEVQVVT-DSSWENLVISSENPVLVEFWAPWCGPCRMIA------PAIEELAK 121
+ + +N Q+ T D + LV + PV+++ +A WC C+ P +++
Sbjct: 5 AQTQTHLNFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA 64
Query: 122 EYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKES----IIGAVPKSTLSSTL 177
+ A N + + +PT+LFF +G+ +E + G + T S+ L
Sbjct: 65 DTVLLQANVTANDAQDVALLKHLNVLGLPTILFF-DGQGQEHPQARVTGFMDAETFSAHL 123
>pdb|1KNG|A Chain A, Crystal Structure Of Ccmg Reducing Oxidoreductase At 1.14
A
Length = 156
Score = 33.5 bits (75), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 98 LVEFWAPWCGPCRMIAPAIEELAKEYAGKVAC--FKLNTDDSPNIATKYG 145
LV WA WC PC AP + EL K+ ++ +K D++ +YG
Sbjct: 46 LVNVWASWCVPCHDEAPLLTELGKDKRFQLVGINYKDAADNARRFLGRYG 95
>pdb|1J08|A Chain A, Crystal Structure Of Glutaredoxin-Like Protein From
Pyrococcus Horikoshii
pdb|1J08|B Chain B, Crystal Structure Of Glutaredoxin-Like Protein From
Pyrococcus Horikoshii
pdb|1J08|C Chain C, Crystal Structure Of Glutaredoxin-Like Protein From
Pyrococcus Horikoshii
pdb|1J08|D Chain D, Crystal Structure Of Glutaredoxin-Like Protein From
Pyrococcus Horikoshii
pdb|1J08|E Chain E, Crystal Structure Of Glutaredoxin-Like Protein From
Pyrococcus Horikoshii
pdb|1J08|F Chain F, Crystal Structure Of Glutaredoxin-Like Protein From
Pyrococcus Horikoshii
pdb|1J08|G Chain G, Crystal Structure Of Glutaredoxin-Like Protein From
Pyrococcus Horikoshii
pdb|1J08|H Chain H, Crystal Structure Of Glutaredoxin-Like Protein From
Pyrococcus Horikoshii
Length = 226
Score = 33.1 bits (74), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 43/106 (40%), Gaps = 5/106 (4%)
Query: 76 NEVQVVTDSSWENLVISSENPVLVEFWAPWCGPC----RMIAPAIEELAKEYAGKVACFK 131
+ ++ DS E I + +L+ F P C C RM E K GK+
Sbjct: 117 GDTDLMQDSKEEVSKIDKDVRILI-FVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDM 175
Query: 132 LNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTL 177
+ + P A +Y + ++P ++ NGE K GA P+ L
Sbjct: 176 VEAIEYPEWADQYNVMAVPKIVIQVNGEDKVQFEGAYPEKMFLEKL 221
>pdb|3IOS|A Chain A, Structure Of Mtb Dsbf In Its Mixed Oxidized And Reduced
Forms
Length = 150
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 96 PVLVEFWAPWCGPCRMIAPAIEELAKEY 123
P ++ FWAPWC C+ AP + ++A +
Sbjct: 41 PAVLWFWAPWCPTCQGEAPVVGQVAASH 68
>pdb|1ZZO|A Chain A, Structure Of Mtb Dsbf In Its Oxidized Form
Length = 136
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 96 PVLVEFWAPWCGPCRMIAPAIEELAKEY 123
P ++ FWAPWC C+ AP + ++A +
Sbjct: 27 PAVLWFWAPWCPTCQGEAPVVGQVAASH 54
>pdb|3KH7|A Chain A, Crystal Structure Of The Periplasmic Soluble Domain Of
Reduced Ccmg From Pseudomonas Aeruginosa
pdb|3KH9|A Chain A, Crystal Structure Of The Periplasmic Soluble Domain Of
Oxidized Ccmg From Pseudomonas Aeruginosa
Length = 176
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 96 PVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKY 144
P LV W WC CR+ P + LA++ V + +N D A K+
Sbjct: 60 PALVNVWGTWCPSCRVEHPELTRLAEQ---GVVIYGINYKDDNAAAIKW 105
>pdb|2G2Q|A Chain A, The Crystal Structure Of G4, The Poxviral Disulfide
Oxidoreductase Essential For Cytoplasmic Disulfide Bond
Formation
pdb|2G2Q|B Chain B, The Crystal Structure Of G4, The Poxviral Disulfide
Oxidoreductase Essential For Cytoplasmic Disulfide Bond
Formation
pdb|2G2Q|C Chain C, The Crystal Structure Of G4, The Poxviral Disulfide
Oxidoreductase Essential For Cytoplasmic Disulfide Bond
Formation
Length = 124
Score = 32.0 bits (71), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 97 VLVEFWAPWCGPCRMIAPAIEELAKEY 123
VL+ F P+C C ++ A+EEL EY
Sbjct: 4 VLIIFGKPYCSICENVSDAVEELKSEY 30
>pdb|1NHO|A Chain A, Structural And Functional Characterization Of A
Thioredoxin-Like Protein From Methanobacterium
Thermoautotrophicum
Length = 85
Score = 32.0 bits (71), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 101 FWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEK 160
F +P C C M ++E KE+ K+ K++ A +YG+ ++P + NG
Sbjct: 8 FTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDREKAIEYGLMAVPAIAI--NGVV 65
Query: 161 KESIIGAVPKSTLSSTLDKYVE 182
+ +GA + L ++ +E
Sbjct: 66 R--FVGAPSREELFEAINDEME 85
>pdb|4EUY|A Chain A, Crystal Structure Of Thioredoxin-Like Protein Bce_0499
From Bacillus Cereus Atcc 10987
Length = 105
Score = 31.6 bits (70), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 91 ISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIP 150
I + VL+ CG C + + + + Y V ++ D IA +Y + + P
Sbjct: 15 IEEQQLVLLFIKTENCGVCDVXLRKVNYVLENY-NYVEKIEILLQDXQEIAGRYAVFTGP 73
Query: 151 TVLFFKNGEK 160
TVL F NG++
Sbjct: 74 TVLLFYNGKE 83
>pdb|3H79|A Chain A, Crystal Structure Of Trypanosoma Cruzi Thioredoxin-like
Hypothetical Protein Q4dv70
Length = 127
Score = 31.6 bits (70), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/87 (17%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGK-----VACFKLNTD 135
+TD +++++V+ E V V ++ PW ++L+ + K +++ +
Sbjct: 20 LTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGE 79
Query: 136 DSPNIATKYGIRSIPTVLFFKNGEKKE 162
P++ + + PT+ ++ +K+E
Sbjct: 80 KYPDVIERMRVSGFPTMRYYTRIDKQE 106
>pdb|2LUS|A Chain A, Nmr Structure Of Carcinoscorpius Rotundicauda Thioredoxin
Related Protein 16 And Its Role In Regulating
Transcription Factor Nf-Kb Activity
Length = 143
Score = 31.2 bits (69), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 36/97 (37%), Gaps = 28/97 (28%)
Query: 88 NLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKL-------NTDD---- 136
N + ++ + F A WC PCR P + ++ E A F++ + DD
Sbjct: 20 NEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQY 79
Query: 137 -----------------SPNIATKYGIRSIPTVLFFK 156
+ N+ KYGI IP ++ K
Sbjct: 80 MMESHGDWLAIPYRSGPASNVTAKYGITGIPALVIVK 116
>pdb|2H1B|A Chain A, Resa E80q
pdb|2H1B|B Chain B, Resa E80q
pdb|2H1B|C Chain C, Resa E80q
pdb|2H1B|D Chain D, Resa E80q
Length = 143
Score = 30.8 bits (68), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 6/62 (9%)
Query: 97 VLVEFWAPWCGPCRMIAPAIEELAKEYAGK-VACFKLNTDDSP----NIATKYGIRSIPT 151
V + FW WC PC+ P + K + + V +N +S N YG+ + P
Sbjct: 29 VFLNFWGTWCEPCKKQFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGV-NFPV 87
Query: 152 VL 153
VL
Sbjct: 88 VL 89
>pdb|1ST9|A Chain A, Crystal Structure Of A Soluble Domain Of Resa In The
Oxidised Form
pdb|1ST9|B Chain B, Crystal Structure Of A Soluble Domain Of Resa In The
Oxidised Form
pdb|1SU9|A Chain A, Reduced Structure Of The Soluble Domain Of Resa
pdb|1SU9|B Chain B, Reduced Structure Of The Soluble Domain Of Resa
pdb|2H1D|A Chain A, Resa Ph 9.25
pdb|2H1D|B Chain B, Resa Ph 9.25
Length = 143
Score = 30.8 bits (68), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 6/62 (9%)
Query: 97 VLVEFWAPWCGPCRMIAPAIEELAKEYAGK-VACFKLNTDDSP----NIATKYGIRSIPT 151
V + FW WC PC+ P + K + + V +N +S N YG+ + P
Sbjct: 29 VFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGV-NFPV 87
Query: 152 VL 153
VL
Sbjct: 88 VL 89
>pdb|1O73|A Chain A, Tryparedoxin From Trypanosoma Brucei
Length = 144
Score = 30.8 bits (68), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 30/83 (36%), Gaps = 26/83 (31%)
Query: 97 VLVEFWAPWCGPCRMIAPAIEELAK-----------------------EYAGKVACFKLN 133
V + F A WC PCR P + E + +Y GK+ L
Sbjct: 31 VFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALP 90
Query: 134 TDDSPNI---ATKYGIRSIPTVL 153
D + +G+ SIPT++
Sbjct: 91 FDQRSTVSELGKTFGVESIPTLI 113
>pdb|1A8L|A Chain A, Protein Disulfide Oxidoreductase From Archaeon Pyrococcus
Furiosus
Length = 226
Score = 30.4 bits (67), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 5/91 (5%)
Query: 91 ISSENPVLVEFWAPWCGPC----RMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGI 146
I + +LV F P C C RM E K GK+ + + P A +Y +
Sbjct: 132 IDQDVRILV-FVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYPEWADQYNV 190
Query: 147 RSIPTVLFFKNGEKKESIIGAVPKSTLSSTL 177
++P ++ NGE + GA P+ L
Sbjct: 191 MAVPKIVIQVNGEDRVEFEGAYPEKMFLEKL 221
>pdb|1LU4|A Chain A, 1.1 Angstrom Resolution Crystal Structure Of A Secreted
Mycobacterium Tuberculosis Disulfide Oxidoreductase
Homologous To E. Coli Dsbe: Implications For Functions
Length = 136
Score = 30.0 bits (66), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 96 PVLVEFWAPWCGPCRMIAPAIEELA 120
P ++ FW PWC C AP++ ++A
Sbjct: 26 PAVLWFWTPWCPFCNAEAPSLSQVA 50
>pdb|3P09|A Chain A, Crystal Structure Of Beta-Lactamase From Francisella
Tularensis
pdb|3P09|B Chain B, Crystal Structure Of Beta-Lactamase From Francisella
Tularensis
Length = 290
Score = 29.6 bits (65), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Query: 111 MIAPAIEE----LAKEYAGKVACFKLNTDDSPNI 140
+ AP +++ L +Y GK+ + LNTDD NI
Sbjct: 19 LAAPQLDDSFKNLENKYDGKIGIYTLNTDDKTNI 52
>pdb|2F9S|A Chain A, 2nd Crystal Structure Of A Soluble Domain Of Resa In The
Oxidised Form
pdb|2F9S|B Chain B, 2nd Crystal Structure Of A Soluble Domain Of Resa In The
Oxidised Form
Length = 151
Score = 29.6 bits (65), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 34/86 (39%), Gaps = 11/86 (12%)
Query: 97 VLVEFWAPWCGPCRMIAPAIEELAKEYAGK-VACFKLNTDDSP----NIATKYGIRSIPT 151
V + FW WC PC+ P K + + V +N +S N YG+ + P
Sbjct: 29 VFLNFWGTWCEPCKKEFPYXANQYKHFKSQGVEIVAVNVGESKIAVHNFXKSYGV-NFPV 87
Query: 152 VLFFKNGEKKESIIGAVPKSTLSSTL 177
VL + ++ A S L +T
Sbjct: 88 VL-----DTDRQVLDAYDVSPLPTTF 108
>pdb|2LS5|A Chain A, Solution Structure Of A Putative Protein Disulfide
Isomerase From Bacteroides Thetaiotaomicron
Length = 159
Score = 29.6 bits (65), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 97 VLVEFWAPWCGPCRMIAPAIEE 118
V+++F A WCG CR P IE+
Sbjct: 36 VMLQFTASWCGVCRKEMPFIEK 57
>pdb|1VRS|D Chain D, Crystal Structure Of The Disulfide-Linked Complex Between
The N- Terminal And C-Terminal Domain Of The Electron
Transfer Catalyst Dsbd
pdb|1VRS|E Chain E, Crystal Structure Of The Disulfide-Linked Complex Between
The N- Terminal And C-Terminal Domain Of The Electron
Transfer Catalyst Dsbd
pdb|1VRS|F Chain F, Crystal Structure Of The Disulfide-Linked Complex Between
The N- Terminal And C-Terminal Domain Of The Electron
Transfer Catalyst Dsbd
Length = 134
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/120 (20%), Positives = 50/120 (41%), Gaps = 12/120 (10%)
Query: 69 CKAREAVNEVQVVT-DSSWENLVISSENPVLVEFWAPWCGPCRMIA------PAIEELAK 121
+ + +N Q+ T D + LV + PV+++ +A WC + P +++
Sbjct: 5 AQTQTHLNFTQIKTVDELNQALVEAKGKPVMLDLYADWCVASKEFEKYTFSDPQVQKALA 64
Query: 122 EYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKES----IIGAVPKSTLSSTL 177
+ A N + + +PT+LFF +G+ +E + G + T S+ L
Sbjct: 65 DTVLLQANVTANDAQDVALLKHLNVLGLPTILFF-DGQGQEHPQARVTGFMDAETFSAHL 123
>pdb|2B5X|A Chain A, Solution Structure Of A Thioredoxin-Like Protein In The
Reduced Form
pdb|2B5Y|A Chain A, Solution Structure Of A Thioredoxin-Like Protein In The
Oxidized Form
Length = 148
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 93 SENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKV 127
E P L+ FW+ C C+ P + E +Y ++
Sbjct: 28 GEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQL 62
>pdb|2B1L|A Chain A, Crystal Structure Of N-Terminal 57 Residue Deletion Mutant
Of E. Coli Ccmg Protein(Residues 58-185)
pdb|2B1L|B Chain B, Crystal Structure Of N-Terminal 57 Residue Deletion Mutant
Of E. Coli Ccmg Protein(Residues 58-185)
Length = 129
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 90 VISSENPVLVEFWAPWCGPCRMIAPAIEELAKE 122
V++ PVL+ WA WC CR + +L+ +
Sbjct: 8 VLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ 40
>pdb|3OR5|A Chain A, Crystal Structure Of Thiol:disulfide Interchange Protein,
Thioredoxin Family Protein From Chlorobium Tepidum Tls
Length = 165
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 98 LVEFWAPWCGPCRMIAPAIEELAKEYAGKVACF 130
+V F+A WC PCR P ++ K +A + F
Sbjct: 38 IVNFFATWCPPCRSEIPDXVQVQKTWASRGFTF 70
>pdb|3FKF|A Chain A, Thiol-Disulfide Oxidoreductase From Bacteroides Fragilis
Nctc 9343
pdb|3FKF|B Chain B, Thiol-Disulfide Oxidoreductase From Bacteroides Fragilis
Nctc 9343
pdb|3FKF|C Chain C, Thiol-Disulfide Oxidoreductase From Bacteroides Fragilis
Nctc 9343
pdb|3FKF|D Chain D, Thiol-Disulfide Oxidoreductase From Bacteroides Fragilis
Nctc 9343
Length = 148
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 97 VLVEFWAPWCGPCRMIAPAIEELAKEY 123
+L+ FWA WC P ++ L KEY
Sbjct: 36 LLLNFWASWCDPQPEANAELKRLNKEY 62
>pdb|3EMX|A Chain A, Crystal Structure Of Thioredoxin From Aeropyrum Pernix
pdb|3EMX|B Chain B, Crystal Structure Of Thioredoxin From Aeropyrum Pernix
Length = 135
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 143 KYGIRSIPTVLFFKNGEKKESIIGAVPKS 171
K G+ PT++F+K G + ++GA P S
Sbjct: 87 KAGVEGTPTLVFYKEGRIVDKLVGATPWS 115
>pdb|3IA1|A Chain A, Crystal Structure Of Thio-Disulfide Isomerase From Thermus
Thermophilus
pdb|3IA1|B Chain B, Crystal Structure Of Thio-Disulfide Isomerase From Thermus
Thermophilus
Length = 154
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/50 (24%), Positives = 21/50 (42%)
Query: 95 NPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKY 144
P ++ FWA WC C+ P + +A+E D+ + +Y
Sbjct: 31 KPAVIVFWASWCTVCKAEFPGLHRVAEETGVPFYVISREPRDTREVVLEY 80
>pdb|2G0F|A Chain A, Crystal Structure Of P144a Mutant Of E.Coli Ccmg Protein
Length = 168
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 90 VISSENPVLVEFWAPWCGPCRMIAPAIEELAKE 122
V++ PVL+ WA WC CR + +L+ +
Sbjct: 47 VLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ 79
>pdb|1O6J|A Chain A, Tryparedoxin Ii From C.Fasciculata Solved By Sulphur
Phasing
pdb|1O6J|B Chain B, Tryparedoxin Ii From C.Fasciculata Solved By Sulphur
Phasing
Length = 150
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 97 VLVEFWAPWCGPCRMIAPAIEELAKEYAGK 126
V F A WC PCR P + + K +A K
Sbjct: 32 VFFYFSASWCPPCRAFTPQLIDFYKAHAEK 61
>pdb|1FG4|A Chain A, Structure Of Tryparedoxin Ii
pdb|1FG4|B Chain B, Structure Of Tryparedoxin Ii
Length = 149
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 97 VLVEFWAPWCGPCRMIAPAIEELAKEYAGK 126
V F A WC PCR P + + K +A K
Sbjct: 31 VFFYFSASWCPPCRAFTPQLIDFYKAHAEK 60
>pdb|3LWA|A Chain A, The Crystal Structure Of A Secreted Thiol-Disulfide
Isomerase From Corynebacterium Glutamicum To 1.75a
Length = 183
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 43/114 (37%), Gaps = 31/114 (27%)
Query: 84 SSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATK 143
S +EN V V++ W WC PCR + ++ + +E D+P T
Sbjct: 55 SDFENQV------VILNAWGQWCAPCRSESDDLQIIHEELQAA------GNGDTPG-GTV 101
Query: 144 YGI------RSIPTVLFFKNGEKKESI----------IGAVPKSTLSST--LDK 179
GI R I NG SI +G VP S + +T LDK
Sbjct: 102 LGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFXTAASLGGVPASVIPTTIVLDK 155
>pdb|2B1K|A Chain A, Crystal Structure Of E. Coli Ccmg Protein
Length = 168
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 90 VISSENPVLVEFWAPWCGPCRMIAPAIEELAKE 122
V++ PVL+ WA WC CR + +L+ +
Sbjct: 47 VLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ 79
>pdb|1O81|A Chain A, Tryparedoxin Ii From C.fasciculata Solved By Sulphur
Phasing
pdb|1O81|B Chain B, Tryparedoxin Ii From C.fasciculata Solved By Sulphur
Phasing
pdb|1OC9|B Chain B, Tryparedoxin Ii From C.Fasciculata Solved By Mr
pdb|1OC8|A Chain A, Tryparedoxin Ii From C.Fasciculata Solved By Mr
pdb|1OC8|B Chain B, Tryparedoxin Ii From C.Fasciculata Solved By Mr
Length = 152
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 97 VLVEFWAPWCGPCRMIAPAIEELAKEYAGK 126
V F A WC PCR P + + K +A K
Sbjct: 34 VFFYFSASWCPPCRAFTPQLIDFYKAHAEK 63
>pdb|3K8N|A Chain A, Crystal Structure Of E. Coli Ccmg
Length = 185
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 90 VISSENPVLVEFWAPWCGPCRMIAPAIEELAKE 122
V++ PVL+ WA WC CR + +L+ +
Sbjct: 64 VLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ 96
>pdb|3QCP|A Chain A, Qsox From Trypanosoma Brucei
Length = 470
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 8/68 (11%)
Query: 96 PVLVEFWAPWCGPCRMIAPAIEELA---KEYAGKVA-----CFKLNTDDSPNIATKYGIR 147
P +V F+ CG CR A + A K GK A +N ++ KY I
Sbjct: 44 PWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKYDIN 103
Query: 148 SIPTVLFF 155
+P + FF
Sbjct: 104 FVPRLFFF 111
>pdb|1OC9|A Chain A, Tryparedoxin Ii From C.Fasciculata Solved By Mr
Length = 152
Score = 28.1 bits (61), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 97 VLVEFWAPWCGPCRMIAPAIEELAKEYA 124
V F A WC PCR P + + K +A
Sbjct: 34 VFFYFSASWCPPCRAFTPQLIDFYKAHA 61
>pdb|3C73|A Chain A, Structure Of Cehc Variant Resa
pdb|3C73|B Chain B, Structure Of Cehc Variant Resa
Length = 140
Score = 27.7 bits (60), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 11/86 (12%)
Query: 97 VLVEFWAPWCGPCRMIAPAIEELAKEYAGK-VACFKLNTDDSP----NIATKYGIRSIPT 151
V + FW WC C+ P + K + + V +N +S N YG+ + P
Sbjct: 26 VFLNFWGTWCEHCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGV-NFPV 84
Query: 152 VLFFKNGEKKESIIGAVPKSTLSSTL 177
VL + ++ A S L +T
Sbjct: 85 VL-----DTDRQVLDAYDVSPLPTTF 105
>pdb|2FY6|A Chain A, Structure Of The N-Terminal Domain Of Neisseria
Meningitidis Pilb
Length = 143
Score = 27.7 bits (60), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 91 ISSENPVLVEFWAPWCGPCRMIAPAIEELAKE 122
+ + P L++FWA WC C E+ A++
Sbjct: 20 LKKDKPTLIKFWASWCPLCLSELGQTEKWAQD 51
>pdb|2JZR|A Chain A, Solution Structure Of The Oxidized Form (Cys67-Cys70) Of
The N-Terminal Domain Of Pilb From N. Meningitidis.
pdb|2JZS|A Chain A, Solution Structure Of The Reduced Form Of The N-Terminal
Domain Of Pilb From N. Meningitidis.
pdb|2K9F|A Chain A, Structural Features Of The Complex Between The Dsbd N-
Terminal And The Pilb N-Terminal Domains From Neisseria
Meningitidis
Length = 144
Score = 27.3 bits (59), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 91 ISSENPVLVEFWAPWCGPCRMIAPAIEELAKE 122
+ + P L++FWA WC C E+ A++
Sbjct: 21 LKKDKPTLIKFWASWCPLCLSELGQTEKWAQD 52
>pdb|2H19|A Chain A, Crystal Structure Of Resa Cys77ala Variant
pdb|2H19|B Chain B, Crystal Structure Of Resa Cys77ala Variant
Length = 143
Score = 27.3 bits (59), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 6/62 (9%)
Query: 97 VLVEFWAPWCGPCRMIAPAIEELAKEYAGK-VACFKLNTDDSP----NIATKYGIRSIPT 151
V + FW WC P + P + K + + V +N +S N YG+ + P
Sbjct: 29 VFLNFWGTWCEPAKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGV-NFPV 87
Query: 152 VL 153
VL
Sbjct: 88 VL 89
>pdb|2H1A|A Chain A, Resa C74a Variant
pdb|2H1A|B Chain B, Resa C74a Variant
Length = 143
Score = 27.3 bits (59), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 6/62 (9%)
Query: 97 VLVEFWAPWCGPCRMIAPAIEELAKEYAGK-VACFKLNTDDSP----NIATKYGIRSIPT 151
V + FW W PC+ P + K + + V +N +S N YG+ + P
Sbjct: 29 VFLNFWGTWAEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGV-NFPV 87
Query: 152 VL 153
VL
Sbjct: 88 VL 89
>pdb|2H30|A Chain A, Crystal Structure Of The N-Terminal Domain Of Pilb From
Neisseria Gonorrhoeae
Length = 164
Score = 27.3 bits (59), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 91 ISSENPVLVEFWAPWCGPC 109
+ + P L++FWA WC C
Sbjct: 35 LKKDKPTLIKFWASWCPLC 53
>pdb|3C71|A Chain A, Struture Of A Resa Variant With A Dsba-Like Active Site
Motif (Cphc)
Length = 143
Score = 27.3 bits (59), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 11/86 (12%)
Query: 97 VLVEFWAPWCGPCRMIAPAIEELAKEYAGK-VACFKLNTDDSP----NIATKYGIRSIPT 151
V + FW WC C+ P + K + + V +N +S N YG+ + P
Sbjct: 29 VFLNFWGTWCPHCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGV-NFPV 87
Query: 152 VLFFKNGEKKESIIGAVPKSTLSSTL 177
VL + ++ A S L +T
Sbjct: 88 VL-----DTDRQVLDAYDVSPLPTTF 108
>pdb|3ERW|A Chain A, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|B Chain B, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|C Chain C, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|D Chain D, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|E Chain E, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|F Chain F, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|G Chain G, Crystal Structure Of Stoa From Bacillus Subtilis
Length = 145
Score = 26.9 bits (58), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 7/84 (8%)
Query: 97 VLVEFWAPWCGPCRMIAPAIEELAKEYAGK----VACFKLNTDDSPNIATKY---GIRSI 149
++ FW WC PC+ P + + V +N++ + + + +
Sbjct: 37 TILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTF 96
Query: 150 PTVLFFKNGEKKESIIGAVPKSTL 173
P VL K KE I +P S L
Sbjct: 97 PIVLDSKGELXKEYHIITIPTSFL 120
>pdb|3S9F|A Chain A, The Structure Of Tryparedoxin I From Leishmania Major
Length = 165
Score = 26.9 bits (58), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 97 VLVEFWAPWCGPCRMIAPAIEELAKEY 123
V F A WC PCR P + E +++
Sbjct: 51 VFFYFSASWCPPCRGFTPQLVEFYEKH 77
>pdb|2BOY|A Chain A, Crystal Structure Of 3-Chlorocatechol 1,2-Dioxygenase From
Rhodococcus Opacus 1cp
pdb|2BOY|B Chain B, Crystal Structure Of 3-Chlorocatechol 1,2-Dioxygenase From
Rhodococcus Opacus 1cp
pdb|2BOY|C Chain C, Crystal Structure Of 3-Chlorocatechol 1,2-Dioxygenase From
Rhodococcus Opacus 1cp
pdb|2BOY|D Chain D, Crystal Structure Of 3-Chlorocatechol 1,2-Dioxygenase From
Rhodococcus Opacus 1cp
pdb|2BOY|E Chain E, Crystal Structure Of 3-Chlorocatechol 1,2-Dioxygenase From
Rhodococcus Opacus 1cp
pdb|2BOY|F Chain F, Crystal Structure Of 3-Chlorocatechol 1,2-Dioxygenase From
Rhodococcus Opacus 1cp
pdb|2BOY|G Chain G, Crystal Structure Of 3-Chlorocatechol 1,2-Dioxygenase From
Rhodococcus Opacus 1cp
pdb|2BOY|H Chain H, Crystal Structure Of 3-Chlorocatechol 1,2-Dioxygenase From
Rhodococcus Opacus 1cp
Length = 254
Score = 26.6 bits (57), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 140 IATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDK 179
I K G S+ T L+F+NG+ S + K L +LDK
Sbjct: 195 IIAKEGYESLTTQLYFENGQWTGSDVANAVKPELLLSLDK 234
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.131 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,386,338
Number of Sequences: 62578
Number of extensions: 139815
Number of successful extensions: 680
Number of sequences better than 100.0: 201
Number of HSP's better than 100.0 without gapping: 188
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 424
Number of HSP's gapped (non-prelim): 208
length of query: 182
length of database: 14,973,337
effective HSP length: 93
effective length of query: 89
effective length of database: 9,153,583
effective search space: 814668887
effective search space used: 814668887
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 48 (23.1 bits)