BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030165
(182 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P48384|TRXM_PEA Thioredoxin M-type, chloroplastic OS=Pisum sativum PE=2 SV=1
Length = 172
Score = 202 bits (515), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 90/115 (78%), Positives = 104/115 (90%)
Query: 67 ILCKAREAVNEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGK 126
+L AREAVNEVQVV DSSW+ LVI SE PVLV+FWAPWCGPCRMIAP I+ELAKEYAGK
Sbjct: 58 VLLHAREAVNEVQVVNDSSWDELVIGSETPVLVDFWAPWCGPCRMIAPIIDELAKEYAGK 117
Query: 127 VACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
+ C+KLNTD+SPN ATKYGIRSIPTVLFFKNGE+K+S+IGAVPK+TLS ++KY+
Sbjct: 118 IKCYKLNTDESPNTATKYGIRSIPTVLFFKNGERKDSVIGAVPKATLSEKVEKYI 172
>sp|P07591|TRXM_SPIOL Thioredoxin M-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2
Length = 181
Score = 199 bits (505), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/185 (55%), Positives = 137/185 (74%), Gaps = 10/185 (5%)
Query: 1 MAMKNCFQVSSVYSTRAGVVQCY----QPFSSVKKIHLPISNGLNKSNFSFTSSCSSLSL 56
MA++NC Q+S+ S V+ + QP S K+++P GL +S F + SS+S
Sbjct: 1 MAIENCLQLSTSASVGTVAVKSHVHHLQPSS---KVNVPTFRGLKRS---FPALSSSVSS 54
Query: 57 PLGSRSRNSLILCKAREAVNEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAI 116
+ R S ++CKA EAV EVQ V DSSW+ V+ SE PV+V+FWAPWCGPC++IAP I
Sbjct: 55 SSPRQFRYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVI 114
Query: 117 EELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSST 176
+ELAKEY+GK+A +KLNTD++P IAT+Y IRSIPTVLFFKNGE+KESIIGAVPKSTL+ +
Sbjct: 115 DELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDS 174
Query: 177 LDKYV 181
++KY+
Sbjct: 175 IEKYL 179
>sp|Q41864|TRXM_MAIZE Thioredoxin M-type, chloroplastic OS=Zea mays GN=TRM1 PE=2 SV=1
Length = 167
Score = 182 bits (463), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 123/182 (67%), Gaps = 19/182 (10%)
Query: 1 MAMKNCFQVSSVYSTRAGVVQCYQPFSSVKKIHLPISNGLNKSNFSFTSSCSSLSLPLGS 60
MAM+ CF+ ++++ P S ++ + N S + L +G
Sbjct: 1 MAMETCFRAWALHA----------PAGSKDRLLV--------GNLVLPSKRALAPLSVGR 42
Query: 61 -RSRNSLILCKAREAVNEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEEL 119
+R +C+++ AV+EV V + +W+ LV++ E PVLVEFWAPWCGPCRMIAP I+EL
Sbjct: 43 VATRRPRHVCQSKNAVDEVVVADEKNWDGLVMACETPVLVEFWAPWCGPCRMIAPVIDEL 102
Query: 120 AKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDK 179
AK+YAGK+ C K+NTDDSPN+A+ YGIRSIPTVL FK GEKKES+IGAVPKSTL++ +DK
Sbjct: 103 AKDYAGKITCCKVNTDDSPNVASTYGIRSIPTVLIFKGGEKKESVIGAVPKSTLTTLIDK 162
Query: 180 YV 181
Y+
Sbjct: 163 YI 164
>sp|Q9ZP21|TRXM_WHEAT Thioredoxin M-type, chloroplastic OS=Triticum aestivum PE=2 SV=1
Length = 175
Score = 181 bits (460), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/186 (48%), Positives = 122/186 (65%), Gaps = 18/186 (9%)
Query: 1 MAMKNCFQVSSVYSTRAGVVQ-----CYQPFSSVKKIHLPISNGLNKSNFSFTSSCSSLS 55
MA++ C + ++Y+ +AG+ + Y P +S KS
Sbjct: 1 MALETCLRGWALYAPQAGIRERLSSGSYAPSRPRTAAPAVVSPSPYKSA----------- 49
Query: 56 LPLGSRSRNSLILCKAREAVNEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPA 115
L + R S +CK + V+EV V + +W+N+VI+ E+PVLVEFWAPWCGPCRMIAP
Sbjct: 50 --LVAARRPSRFVCKCKNVVDEVIVADEKNWDNMVIACESPVLVEFWAPWCGPCRMIAPV 107
Query: 116 IEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSS 175
I+ELAK+Y GK+ C K+NTDD PNIA+ YGIRSIPTVL FK+GEKKES+IGAVPK+TL +
Sbjct: 108 IDELAKDYVGKIKCCKVNTDDCPNIASTYGIRSIPTVLMFKDGEKKESVIGAVPKTTLCT 167
Query: 176 TLDKYV 181
+DKY+
Sbjct: 168 IIDKYI 173
>sp|Q9ZP20|TRXM5_ORYSJ Thioredoxin M5, chloroplastic OS=Oryza sativa subsp. japonica
GN=TRXM PE=2 SV=1
Length = 172
Score = 172 bits (437), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 97/181 (53%), Positives = 121/181 (66%), Gaps = 11/181 (6%)
Query: 1 MAMKNCFQVSSVYSTRAGVVQCYQPFSSVKKIHLPISNGLNKSNFSFTSSCSSLSLPLGS 60
MA++ CF+ + + QP SS + +G S S +S S PL
Sbjct: 1 MALETCFRAWAT-------LHAPQPPSSGGSRDRLLLSGAGSSQSKPRLSVASPS-PLRP 52
Query: 61 RSRNSLILCKAREAVNEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELA 120
SR C+ V+EV V + +W+++V+ SE PVLVEFWAPWCGPCRMIAP I+ELA
Sbjct: 53 ASR---FACQCSNVVDEVVVADEKNWDSMVLGSEAPVLVEFWAPWCGPCRMIAPVIDELA 109
Query: 121 KEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKY 180
KEY GK+ C K+NTDDSPNIAT YGIRSIPTVL FKNGEKKES+IGAVPK+TL++ +DKY
Sbjct: 110 KEYVGKIKCCKVNTDDSPNIATNYGIRSIPTVLMFKNGEKKESVIGAVPKTTLATIIDKY 169
Query: 181 V 181
V
Sbjct: 170 V 170
>sp|Q9SEU8|TRXM2_ARATH Thioredoxin M2, chloroplastic OS=Arabidopsis thaliana GN=At4g03520
PE=1 SV=2
Length = 186
Score = 169 bits (429), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 75/148 (50%), Positives = 111/148 (75%), Gaps = 1/148 (0%)
Query: 34 LPISNGLNKSNFSFTSSCSSLSLPLGSRSRNSLILCKAREAVNEVQVVTDSSWENLVISS 93
LP S+GL +S +S+ P SR R +++ C+A+E ++QVV DS+W++LV+ +
Sbjct: 39 LPESSGLRIRLSLSPASLTSIHQPRVSRLRRAVV-CEAQETTTDIQVVNDSTWDSLVLKA 97
Query: 94 ENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVL 153
PV+V+FWAPWCGPC+MI P + +LA+ Y GK+ +KLNTD+SPN +YG+RSIPT++
Sbjct: 98 TGPVVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNTDESPNTPGQYGVRSIPTIM 157
Query: 154 FFKNGEKKESIIGAVPKSTLSSTLDKYV 181
F GEKK++IIGAVPK+TL+S+LDK++
Sbjct: 158 IFVGGEKKDTIIGAVPKTTLTSSLDKFL 185
>sp|Q9XGS0|TRXM_BRANA Thioredoxin M-type, chloroplastic OS=Brassica napus PE=1 SV=1
Length = 177
Score = 166 bits (419), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 67/124 (54%), Positives = 98/124 (79%)
Query: 59 GSRSRNSLILCKAREAVNEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEE 118
SR R I+C+A++ + +V DS+WE+LV+ ++ PV+V+FWAPWCGPC+MI P + E
Sbjct: 54 ASRLRRGGIICEAQDTATGIPMVNDSTWESLVLKADEPVVVDFWAPWCGPCKMIDPIVNE 113
Query: 119 LAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
LA++Y GK+ FKLNTDDSP KYG+RSIPT++ F GEKK++IIGAVPK+TL++++D
Sbjct: 114 LAQQYTGKIKFFKLNTDDSPATPGKYGVRSIPTIMIFVKGEKKDTIIGAVPKTTLATSID 173
Query: 179 KYVE 182
K+++
Sbjct: 174 KFLQ 177
>sp|Q6H7E4|TRXM1_ORYSJ Thioredoxin M1, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os02g0639900 PE=2 SV=1
Length = 173
Score = 164 bits (414), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 73/124 (58%), Positives = 100/124 (80%), Gaps = 2/124 (1%)
Query: 60 SRSRNSLILCKAREAVNEVQV--VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIE 117
R+R ++C A+ QV VT S+W++LV+ SE PVLVEFWA WCGPC+MI P I
Sbjct: 48 GRARGVSVVCAAQGQETSFQVPDVTKSTWQSLVVESELPVLVEFWASWCGPCKMIDPVIG 107
Query: 118 ELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTL 177
+L+KEY GK+ C+KLNTD++P+IAT++GIRSIPT++ FKNGEKK+++IGAVP+STL S++
Sbjct: 108 KLSKEYEGKLNCYKLNTDENPDIATQFGIRSIPTMMIFKNGEKKDAVIGAVPESTLVSSI 167
Query: 178 DKYV 181
DKY+
Sbjct: 168 DKYI 171
>sp|Q9SEU6|TRXM4_ARATH Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana GN=At3g15360
PE=1 SV=2
Length = 193
Score = 159 bits (401), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 74/144 (51%), Positives = 105/144 (72%), Gaps = 4/144 (2%)
Query: 42 KSNFSFTSSCSSLSLPLGSR-SRNSLILCKARE---AVNEVQVVTDSSWENLVISSENPV 97
KS+ S + +SL +R +R I C+A++ A EV ++DS W+ V+ S+ PV
Sbjct: 48 KSSRSLVTQSASLGANRRTRIARGGRIACEAQDTTAAAVEVPNLSDSEWQTKVLESDVPV 107
Query: 98 LVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKN 157
LVEFWAPWCGPCRMI P +++LAK++AGK +K+NTD+SPN A +YGIRS+PTV+ FK
Sbjct: 108 LVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKFYKINTDESPNTANRYGIRSVPTVIIFKG 167
Query: 158 GEKKESIIGAVPKSTLSSTLDKYV 181
GEKK+SIIGAVP+ TL T+++++
Sbjct: 168 GEKKDSIIGAVPRETLEKTIERFL 191
>sp|Q7X8R5|TRXM2_ORYSJ Thioredoxin M2, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os04g0530600 PE=2 SV=2
Length = 180
Score = 152 bits (385), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 65/118 (55%), Positives = 97/118 (82%), Gaps = 2/118 (1%)
Query: 67 ILCKAREAVNEVQV--VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYA 124
++C + +QV VT S+W++LV+ SE PVLV +WA WCGPC+MI P + +L+KEY
Sbjct: 62 VVCAVQGQDTSIQVPEVTKSTWQSLVMESELPVLVGYWATWCGPCKMIDPVVGKLSKEYE 121
Query: 125 GKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYVE 182
GK+ C+KLNTD++P+IA++YG+RSIPT++ FKNGEKK+++IGAVP+STL ++++K+VE
Sbjct: 122 GKLKCYKLNTDENPDIASQYGVRSIPTMMIFKNGEKKDAVIGAVPESTLIASIEKFVE 179
>sp|O48737|TRXM1_ARATH Thioredoxin M1, chloroplastic OS=Arabidopsis thaliana GN=At1g03680
PE=1 SV=1
Length = 179
Score = 150 bits (379), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 70/148 (47%), Positives = 108/148 (72%), Gaps = 5/148 (3%)
Query: 34 LPISNGLNKSNFSFTSSCSSLSLPLGSRSRNSLILCKAREAVNEVQVVTDSSWENLVISS 93
LP S+GL ++ S +S + + SR R +I C+A++ + VV DS+W++LV+ +
Sbjct: 37 LPESSGL-RTRVSLSSLSKNSRV---SRLRRGVI-CEAQDTATGIPVVNDSTWDSLVLKA 91
Query: 94 ENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVL 153
+ PV V+FWAPWCGPC+MI P + ELA++YAG+ +KLNTD+SP +YG+RSIPT++
Sbjct: 92 DEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPATPGQYGVRSIPTIM 151
Query: 154 FFKNGEKKESIIGAVPKSTLSSTLDKYV 181
F NGEKK++IIGAV K TL+++++K++
Sbjct: 152 IFVNGEKKDTIIGAVSKDTLATSINKFL 179
>sp|P23400|TRXM_CHLRE Thioredoxin M-type, chloroplastic OS=Chlamydomonas reinhardtii
GN=TRXM PE=1 SV=3
Length = 140
Score = 147 bits (370), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 86/105 (81%)
Query: 77 EVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDD 136
E V D +++N+V+ S PVLV+FWAPWCGPCR+IAP ++E+A EY K+ C KLNTD+
Sbjct: 35 EAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDE 94
Query: 137 SPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
SPN+A++YGIRSIPT++ FK G+K E+IIGAVPK+T+ T++KY+
Sbjct: 95 SPNVASEYGIRSIPTIMVFKGGKKCETIIGAVPKATIVQTVEKYL 139
>sp|P52231|THIO_SYNY3 Thioredoxin OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=trxA
PE=1 SV=3
Length = 107
Score = 145 bits (365), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 87/101 (86%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
V+D+S++ V+ SE PVLV+FWAPWCGPCRM+AP ++E++++Y GKV KLNTD++PN
Sbjct: 7 VSDASFKEDVLDSELPVLVDFWAPWCGPCRMVAPVVDEISQQYEGKVKVVKLNTDENPNT 66
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
A++YGIRSIPT++ FK G++ + ++GAVPK+TL+STL+KY+
Sbjct: 67 ASQYGIRSIPTLMIFKGGQRVDMVVGAVPKTTLASTLEKYL 107
>sp|P0A4L1|THIO1_NOSS1 Thioredoxin-1 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=trxA
PE=3 SV=2
Length = 107
Score = 145 bits (365), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 86/101 (85%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
VTDS+++ V+ S+ PVLV+FWAPWCGPCRM+AP ++E+A++Y GK+ K+NTD++P +
Sbjct: 7 VTDSTFKQEVLDSDVPVLVDFWAPWCGPCRMVAPVVDEIAQQYEGKIKVVKVNTDENPQV 66
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
A++YGIRSIPT++ FK G+K + ++GAVPK+TLS TL+K++
Sbjct: 67 ASQYGIRSIPTLMIFKGGQKVDMVVGAVPKTTLSQTLEKHL 107
>sp|P0A4L2|THIO1_ANASO Thioredoxin-1 OS=Anabaena sp. (strain PCC 7119) GN=trxA PE=1 SV=2
Length = 107
Score = 145 bits (365), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 86/101 (85%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
VTDS+++ V+ S+ PVLV+FWAPWCGPCRM+AP ++E+A++Y GK+ K+NTD++P +
Sbjct: 7 VTDSTFKQEVLDSDVPVLVDFWAPWCGPCRMVAPVVDEIAQQYEGKIKVVKVNTDENPQV 66
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
A++YGIRSIPT++ FK G+K + ++GAVPK+TLS TL+K++
Sbjct: 67 ASQYGIRSIPTLMIFKGGQKVDMVVGAVPKTTLSQTLEKHL 107
>sp|P50254|THIO_PORYE Thioredoxin OS=Porphyra yezoensis GN=trxA PE=3 SV=1
Length = 107
Score = 144 bits (362), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 61/104 (58%), Positives = 86/104 (82%)
Query: 78 VQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDS 137
V VTD+S++ VI++ PVLV+FWAPWCGPCRM++P ++E+A+EY + K+NTDD+
Sbjct: 3 VSQVTDASFKQEVINNNLPVLVDFWAPWCGPCRMVSPVVDEIAEEYESSIKVVKINTDDN 62
Query: 138 PNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
P IA +YGIRSIPT++ FK GE+ +++IGAVPKSTL+STL+KY+
Sbjct: 63 PTIAAEYGIRSIPTLMIFKAGERVDTVIGAVPKSTLASTLNKYI 106
>sp|P51225|THIO_PORPU Thioredoxin OS=Porphyra purpurea GN=trxA PE=3 SV=1
Length = 107
Score = 142 bits (359), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 60/104 (57%), Positives = 86/104 (82%)
Query: 78 VQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDS 137
V VTD+S++ VI+++ PVLV+FWAPWCGPCRM++P ++ +A+EY + K+NTDD+
Sbjct: 3 VSQVTDASFKQEVINNDLPVLVDFWAPWCGPCRMVSPVVDAIAEEYESSIKVVKINTDDN 62
Query: 138 PNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
P IA +YGIRSIPT++ FK+GE+ +++IGAVPKSTL STL+KY+
Sbjct: 63 PTIAAEYGIRSIPTLMIFKSGERVDTVIGAVPKSTLESTLNKYI 106
>sp|P12243|THIO1_SYNE7 Thioredoxin-1 OS=Synechococcus elongatus (strain PCC 7942) GN=trxA
PE=3 SV=2
Length = 107
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 89/101 (88%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
VTD++++ V+ S PVLV+FWAPWCGPCRM+AP ++E+A++Y+ +V K+NTD++P++
Sbjct: 7 VTDATFKQEVLESSIPVLVDFWAPWCGPCRMVAPVVDEIAQQYSDQVKVVKVNTDENPSV 66
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
A++YGIRSIPT++ FK+G++ ++++GAVPK+TL++TLDK++
Sbjct: 67 ASQYGIRSIPTLMIFKDGQRVDTVVGAVPKTTLANTLDKHL 107
>sp|P37395|THIO_CYACA Thioredoxin OS=Cyanidium caldarium GN=trxA PE=3 SV=1
Length = 107
Score = 139 bits (349), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 60/101 (59%), Positives = 85/101 (84%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
VTD S+E V++SE VLV+FWAPWCGPCRMI+P I+ELA+EY +V K+NTD++P+I
Sbjct: 7 VTDFSFEKEVVNSEKLVLVDFWAPWCGPCRMISPVIDELAQEYVEQVKIVKINTDENPSI 66
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
+ +YGIRSIPT++ FK+G++ +++IGAVPKSTL++ L KY+
Sbjct: 67 SAEYGIRSIPTLMLFKDGKRVDTVIGAVPKSTLTNALKKYL 107
>sp|P50338|THIO_GRIPA Thioredoxin OS=Griffithsia pacifica GN=trxA PE=3 SV=2
Length = 109
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 59/102 (57%), Positives = 80/102 (78%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
V D+S+ VI+S PVLV+FWAPWCGPCRMIA I+E+A +Y K+ K+NTD +P I
Sbjct: 6 VIDTSFHEEVINSRQPVLVDFWAPWCGPCRMIASTIDEIAHDYKDKLKVVKVNTDQNPTI 65
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYVE 182
AT+YGIRSIPTV+ F NG+K ++++GAVPK TL +TL K+++
Sbjct: 66 ATEYGIRSIPTVMIFINGKKVDTVVGAVPKLTLLNTLQKHLK 107
>sp|O22022|THIO_CYAME Thioredoxin OS=Cyanidioschyzon merolae GN=trxA PE=3 SV=1
Length = 102
Score = 130 bits (326), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 81/101 (80%), Gaps = 2/101 (1%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
+ + ++EN V+ SE VLV+FWAPWCGPCRMI P +EE+AKE+ KV ++NTD++PN+
Sbjct: 4 IDELTFENEVLQSEKLVLVDFWAPWCGPCRMIGPILEEIAKEFNLKVV--QVNTDENPNL 61
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
AT YGIRSIPT++ FK G++ +++IGAVPKS L T++KY+
Sbjct: 62 ATFYGIRSIPTLMLFKKGQRVDTVIGAVPKSILIHTINKYL 102
>sp|Q7XQQ2|TRXM3_ORYSJ Thioredoxin M3, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os04g0430800 PE=2 SV=4
Length = 175
Score = 129 bits (324), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 78/123 (63%), Gaps = 12/123 (9%)
Query: 69 CKAREAVNEVQVV------------TDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAI 116
C+ R A + ++ V T SW VI S+ PVL+EFWA WCGPCRM+ +
Sbjct: 46 CRRRWAAHRIRTVSCAYSPRGAKTITACSWNEYVICSDIPVLIEFWASWCGPCRMVHRIV 105
Query: 117 EELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSST 176
+E+A+EYAG++ C+KL+TDD P +AT Y I IPTVL FK+GEK SI G +PK+
Sbjct: 106 DEIAQEYAGRIKCYKLDTDDYPQVATSYSIERIPTVLLFKDGEKTHSITGTLPKAVYVRA 165
Query: 177 LDK 179
++K
Sbjct: 166 IEK 168
>sp|Q4UNK3|THIO_RICFE Thioredoxin OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
GN=trxA PE=3 SV=2
Length = 105
Score = 123 bits (308), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 78/101 (77%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
VTDSS++ V+ S+ PVLV+FWA WCGPC+M+ P I+E++KE GKV K+N D++PNI
Sbjct: 5 VTDSSFKKEVLESDLPVLVDFWAEWCGPCKMLTPIIDEISKELKGKVKVLKMNIDENPNI 64
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
++YGIRSIPT++ FKNGE+K++ IG K++L ++K +
Sbjct: 65 PSEYGIRSIPTIMLFKNGEQKDTKIGLQQKNSLLDWINKSI 105
>sp|P43785|THIO_HAEIN Thioredoxin OS=Haemophilus influenzae (strain ATCC 51907 / DSM
11121 / KW20 / Rd) GN=trxA PE=3 SV=1
Length = 107
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 83/107 (77%)
Query: 75 VNEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNT 134
++EV + D+ +E++V++S+ P+L++FWAPWCGPC+MIAP ++ELA E+AGKV K+N
Sbjct: 1 MSEVLHINDADFESVVVNSDIPILLDFWAPWCGPCKMIAPVLDELAPEFAGKVKIVKMNV 60
Query: 135 DDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
DD+ ++G+RSIPT+L KNG+ + +GA+PK+ L++ +++++
Sbjct: 61 DDNQATPAQFGVRSIPTLLLIKNGQVVATQVGALPKTQLANFINQHI 107
>sp|P33791|THIO_STRAU Thioredoxin (Fragment) OS=Streptomyces aureofaciens GN=trxA PE=3
SV=1
Length = 106
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 76/98 (77%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
VT++++++ V+ S+ PVLV F PWCGPC+M+AP ++E+A EY GKV K+NTD++P +
Sbjct: 6 VTNATFKSDVLESDKPVLVHFEGPWCGPCKMVAPVLDEIANEYEGKVKVAKVNTDENPQL 65
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
A++YG+RSIPT L FK GE +++GA PK+ L++ LD
Sbjct: 66 ASQYGVRSIPTRLMFKGGEVAANMVGAAPKTRLAAFLD 103
>sp|Q9SEU7|TRXM3_ARATH Thioredoxin M3, chloroplastic OS=Arabidopsis thaliana GN=GAT1 PE=2
SV=2
Length = 173
Score = 119 bits (299), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 72/99 (72%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
VT SWE+ V+ SE PVLVEF+ WCGPCRM+ I+E+A +YAGK+ C+ LN D+ +
Sbjct: 71 VTQRSWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNADNDLPV 130
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDK 179
A +Y I+++P VL FKNGEK+ESI+G +PK S +++
Sbjct: 131 AEEYEIKAVPVVLLFKNGEKRESIMGTMPKEFYISAIER 169
>sp|Q92JR5|THIO_RICCN Thioredoxin OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7)
GN=trxA PE=3 SV=1
Length = 105
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 76/101 (75%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
V DSS++ V+ S+ PVLV+FWA WCGPC+M+ P I+E++KE GKV K+N D++PN
Sbjct: 5 VMDSSFKKEVLESDLPVLVDFWAEWCGPCKMLTPIIDEISKELQGKVKVLKMNIDENPNT 64
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
++YGIRSIPT++ FKNGE+K++ IG K++L ++K +
Sbjct: 65 PSEYGIRSIPTIMLFKNGEQKDTKIGLQQKNSLLDWINKSI 105
>sp|P10472|THIO_CHLLT Thioredoxin OS=Chlorobium limicola f.sp. thiosulfatophilum GN=trxA
PE=1 SV=5
Length = 108
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 73/100 (73%)
Query: 82 TDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIA 141
TD +++ ++ S+ VLV+FWA WCGPC M+ P IE+LA +Y GK KLN D++PNIA
Sbjct: 8 TDKNFQTEILDSDKAVLVDFWASWCGPCMMLGPVIEQLADDYEGKAIIAKLNVDENPNIA 67
Query: 142 TKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
+YGIRSIPT+L K G+ + ++GA+PK+ ++ +D+++
Sbjct: 68 GQYGIRSIPTMLIIKGGKVVDQMVGALPKNMIAKKIDEHI 107
>sp|Q9ZEE0|THIO_RICPR Thioredoxin OS=Rickettsia prowazekii (strain Madrid E) GN=trxA PE=3
SV=2
Length = 105
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 77/104 (74%)
Query: 78 VQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDS 137
V VTDSS++N V+ S+ PV+V+FWA WCGPC+M+ P I+E++KE KV K+N D++
Sbjct: 2 VNNVTDSSFKNEVLESDLPVMVDFWAEWCGPCKMLIPIIDEISKELQDKVKVLKMNIDEN 61
Query: 138 PNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
P ++YGIRSIPT++ FKNGE+K++ IG K++L ++K +
Sbjct: 62 PKTPSEYGIRSIPTIMLFKNGEQKDTKIGLQQKNSLLDWINKSI 105
>sp|Q1RKN1|THIO_RICBR Thioredoxin OS=Rickettsia bellii (strain RML369-C) GN=trxA PE=3
SV=2
Length = 105
Score = 117 bits (292), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 70/93 (75%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
VTD S+E V+ S+ PVLV+FWA WC PCRM+ P IEE++K+ KV K+N D++P I
Sbjct: 5 VTDKSFEEEVLKSDLPVLVDFWAEWCSPCRMLTPIIEEISKDLESKVKVLKMNIDENPEI 64
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTL 173
+KYGIRSIPTV+ FKNGE+K++ +G K++L
Sbjct: 65 PSKYGIRSIPTVMLFKNGEQKDTKVGLHQKNSL 97
>sp|P0AA30|THIO_SHIFL Thioredoxin-1 OS=Shigella flexneri GN=trxA PE=3 SV=2
Length = 109
Score = 116 bits (291), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 71/103 (68%)
Query: 76 NEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTD 135
+++ +TD S++ V+ ++ +LV+FWA WCGPC+MIAP ++E+A EY GK+ KLN D
Sbjct: 3 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNID 62
Query: 136 DSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
+P A KYGIR IPT+L FKNGE + +GA+ K L LD
Sbjct: 63 QNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 105
>sp|P0AA28|THIO_SALTY Thioredoxin-1 OS=Salmonella typhimurium (strain LT2 / SGSC1412 /
ATCC 700720) GN=trxA PE=3 SV=2
Length = 109
Score = 116 bits (291), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 71/103 (68%)
Query: 76 NEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTD 135
+++ +TD S++ V+ ++ +LV+FWA WCGPC+MIAP ++E+A EY GK+ KLN D
Sbjct: 3 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNID 62
Query: 136 DSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
+P A KYGIR IPT+L FKNGE + +GA+ K L LD
Sbjct: 63 QNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 105
>sp|P0AA29|THIO_SALTI Thioredoxin-1 OS=Salmonella typhi GN=trxA PE=3 SV=2
Length = 109
Score = 116 bits (291), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 71/103 (68%)
Query: 76 NEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTD 135
+++ +TD S++ V+ ++ +LV+FWA WCGPC+MIAP ++E+A EY GK+ KLN D
Sbjct: 3 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNID 62
Query: 136 DSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
+P A KYGIR IPT+L FKNGE + +GA+ K L LD
Sbjct: 63 QNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 105
>sp|P0AA25|THIO_ECOLI Thioredoxin-1 OS=Escherichia coli (strain K12) GN=trxA PE=1 SV=2
Length = 109
Score = 116 bits (291), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 71/103 (68%)
Query: 76 NEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTD 135
+++ +TD S++ V+ ++ +LV+FWA WCGPC+MIAP ++E+A EY GK+ KLN D
Sbjct: 3 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNID 62
Query: 136 DSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
+P A KYGIR IPT+L FKNGE + +GA+ K L LD
Sbjct: 63 QNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 105
>sp|P0AA26|THIO_ECOL6 Thioredoxin-1 OS=Escherichia coli O6:H1 (strain CFT073 / ATCC
700928 / UPEC) GN=trxA PE=3 SV=2
Length = 109
Score = 116 bits (291), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 71/103 (68%)
Query: 76 NEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTD 135
+++ +TD S++ V+ ++ +LV+FWA WCGPC+MIAP ++E+A EY GK+ KLN D
Sbjct: 3 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNID 62
Query: 136 DSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
+P A KYGIR IPT+L FKNGE + +GA+ K L LD
Sbjct: 63 QNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 105
>sp|P0AA27|THIO_ECO57 Thioredoxin-1 OS=Escherichia coli O157:H7 GN=trxA PE=1 SV=2
Length = 109
Score = 116 bits (291), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 71/103 (68%)
Query: 76 NEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTD 135
+++ +TD S++ V+ ++ +LV+FWA WCGPC+MIAP ++E+A EY GK+ KLN D
Sbjct: 3 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNID 62
Query: 136 DSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
+P A KYGIR IPT+L FKNGE + +GA+ K L LD
Sbjct: 63 QNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 105
>sp|P00275|THIO1_CORNE Thioredoxin C-1 OS=Corynebacterium nephridii PE=1 SV=1
Length = 105
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 74/95 (77%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
V +S++++ V+ S PV+V+FWA WCGPC+MIAPA++E+A E AG+V K+N D++P +
Sbjct: 5 VDNSNFQSDVLQSSEPVVVDFWAEWCGPCKMIAPALDEIATEMAGQVKIAKVNIDENPEL 64
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSS 175
A ++G+RSIPT+L FK+GE +++GA PKS L+
Sbjct: 65 AAQFGVRSIPTLLMFKDGELAANMVGAAPKSRLAD 99
>sp|Q8KE49|THIO2_CHLTE Thioredoxin-2 OS=Chlorobium tepidum (strain ATCC 49652 / DSM 12025
/ TLS) GN=trx2 PE=3 SV=3
Length = 109
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 72/100 (72%)
Query: 82 TDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIA 141
TD +++ +++S+ LV+FWA WCGPC M+ P IEELA +Y GK KLN D++PN A
Sbjct: 9 TDQNFQAEILNSDKVALVDFWAAWCGPCMMLGPVIEELAGDYEGKAIIAKLNVDENPNTA 68
Query: 142 TKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
+YGIRSIPT+L K G+ + ++GA+PK+ ++ LD+++
Sbjct: 69 GQYGIRSIPTMLIIKGGKVVDQMVGALPKNMIAKKLDEHI 108
>sp|P52230|THIO_STRCO Thioredoxin OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2)
/ M145) GN=trxA PE=1 SV=4
Length = 110
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 71/101 (70%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
VTD S+E V+ ++ PVLV+FWA WCGPCR IAP++E +A EY K+ KLN D++P
Sbjct: 8 VTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGT 67
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
A KYG+ SIPT+ ++ GE ++I+GA PK+ + L+ ++
Sbjct: 68 AAKYGVMSIPTLNVYQGGEVAKTIVGAKPKAAIVRDLEDFI 108
>sp|Q9X2T1|THIO_PSEAE Thioredoxin OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 /
1C / PRS 101 / LMG 12228) GN=trxA PE=3 SV=1
Length = 108
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 74/98 (75%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
VTD+S+E V+ ++ PVLV++WA WCGPC+MIAP ++E+A++Y GK+ KLN D++ +
Sbjct: 8 VTDASFEQDVLKADGPVLVDYWAEWCGPCKMIAPVLDEVARDYQGKLKVCKLNIDENQDT 67
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
KYG+R IPT++ FK+G + + +GA+ KS L++ LD
Sbjct: 68 PPKYGVRGIPTLMLFKDGNVEATKVGALSKSQLAAFLD 105
>sp|P09857|THIO_CHRVI Thioredoxin OS=Chromatium vinosum GN=trxA PE=1 SV=1
Length = 107
Score = 114 bits (285), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 69/98 (70%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
VTD S+E V S +PVLV++WA WCGPC+M AP +E+A EYAG+V K N D++PN
Sbjct: 7 VTDDSFEEEVXKSPDPVLVDYWADWCGPCKMXAPVXDEIADEYAGRVKXAKXNXDENPNT 66
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
+YG R IPT++ F+ GE + + +GAV KS L++ LD
Sbjct: 67 PPRYGXRGIPTLMLFRGGEVEATKVGAVSKSQLTAFLD 104
>sp|Q68Y00|THIO_RICTY Thioredoxin OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington)
GN=trxA PE=3 SV=1
Length = 105
Score = 114 bits (285), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 75/104 (72%)
Query: 78 VQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDS 137
V VTD S++N V+ S+ PV+V+FWA WCGPC+M+ P I+E++KE KV K+N D++
Sbjct: 2 VNNVTDISFKNEVLESDLPVIVDFWAEWCGPCKMLIPIIDEISKELQDKVKVLKMNIDEN 61
Query: 138 PNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
P ++YG+RSIPT++ FKNGE+K++ IG K +L ++K +
Sbjct: 62 PKTPSEYGVRSIPTIMLFKNGEQKDTKIGLQQKKSLLDWINKSI 105
>sp|P52233|THIO_THIFE Thioredoxin OS=Thiobacillus ferrooxidans GN=trxA PE=3 SV=1
Length = 108
Score = 112 bits (281), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 72/103 (69%)
Query: 76 NEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTD 135
+ + V+D S+E V+ S PVLV+FWA WCGPC+MIAP +EE+A EYA ++ K N D
Sbjct: 3 DAILYVSDDSFETDVLKSSKPVLVDFWAEWCGPCKMIAPILEEIADEYADRLRVAKFNID 62
Query: 136 DSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLD 178
++PN +Y IR IPT+L FK G+ + + +GA+ K+ L++ LD
Sbjct: 63 ENPNTPPQYAIRGIPTLLLFKAGKLEATKVGALSKAQLTAFLD 105
>sp|Q9CM49|THIO_PASMU Thioredoxin OS=Pasteurella multocida (strain Pm70) GN=trxA PE=3
SV=1
Length = 106
Score = 110 bits (276), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 78/105 (74%)
Query: 77 EVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDD 136
EV TD+++ V++S+ PVL++FWAPWCGPCRMI+P ++E+A E++GKV K+N D+
Sbjct: 2 EVLHSTDATFTADVVNSDVPVLLDFWAPWCGPCRMISPILDEIAAEFSGKVKVVKINIDE 61
Query: 137 SPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
+ + G+RSIPT++ FKNG+ + +GA+PK+ L++ +++ +
Sbjct: 62 NQATPAQLGVRSIPTLVLFKNGKAVATQVGALPKNQLANFINQNI 106
>sp|Q7M1B9|THIO_CHLAA Thioredoxin OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM
635 / J-10-fl) GN=trxA PE=1 SV=3
Length = 110
Score = 109 bits (273), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 70/99 (70%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
V DS + V+ S+ PV+V+FWAPWCGPCR+IAP +++LA EYAG++ K+NTDD+
Sbjct: 7 VHDSDFAEKVLKSKTPVVVDFWAPWCGPCRVIAPILDKLAGEYAGRLTIAKVNTDDNVQY 66
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDK 179
A++ GI+ IPT++ FK+G + ++GA P++ DK
Sbjct: 67 ASQLGIQGIPTLVIFKDGREVGRLVGARPEAMYREIFDK 105
>sp|P08058|THIO_RHOSH Thioredoxin OS=Rhodobacter sphaeroides GN=trxA PE=1 SV=3
Length = 106
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 67/95 (70%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
VTD++++ V S+ PV+V+FWA WCGPCR I PA+EEL+KEYAGKV K+N D++P
Sbjct: 6 VTDATFDTEVRKSDVPVVVDFWAEWCGPCRQIGPALEELSKEYAGKVKIVKVNVDENPES 65
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSS 175
G+R IP + FKNG+ + +GA PK+ L++
Sbjct: 66 PAMLGVRGIPALFLFKNGQVVSNKVGAAPKAALAT 100
>sp|Q8CPL5|THIO_STAES Thioredoxin OS=Staphylococcus epidermidis (strain ATCC 12228)
GN=trxA PE=3 SV=1
Length = 104
Score = 107 bits (268), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 70/101 (69%), Gaps = 2/101 (1%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
VTDS +++ + S LV+FWA WCGPC+MIAP +EELA +Y GK KL+ D++P+
Sbjct: 6 VTDSDFDSKIESGVK--LVDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENPST 63
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
A KY + SIPT++ FK+GE + ++G PK L+ LDK++
Sbjct: 64 AAKYEVMSIPTLIVFKDGEPVDKVVGFQPKENLAEVLDKHL 104
>sp|Q5HQ29|THIO_STAEQ Thioredoxin OS=Staphylococcus epidermidis (strain ATCC 35984 /
RP62A) GN=trxA PE=3 SV=1
Length = 104
Score = 107 bits (268), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 70/101 (69%), Gaps = 2/101 (1%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
VTDS +++ + S LV+FWA WCGPC+MIAP +EELA +Y GK KL+ D++P+
Sbjct: 6 VTDSDFDSKIESGVK--LVDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENPST 63
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
A KY + SIPT++ FK+GE + ++G PK L+ LDK++
Sbjct: 64 AAKYEVMSIPTLIVFKDGEPVDKVVGFQPKENLAEVLDKHL 104
>sp|P0A0K5|THIO_STAAW Thioredoxin OS=Staphylococcus aureus (strain MW2) GN=trxA PE=3 SV=1
Length = 104
Score = 107 bits (266), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 70/101 (69%), Gaps = 2/101 (1%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
VTD+ +++ V S LV+FWA WCGPC+MIAP +EELA +Y GK KL+ D++P+
Sbjct: 6 VTDADFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPST 63
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
A KY + SIPT++ FK+G+ + ++G PK L+ LDK++
Sbjct: 64 AAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 104
>sp|P0A0K6|THIO_STAAU Thioredoxin OS=Staphylococcus aureus GN=trxA PE=1 SV=1
Length = 104
Score = 107 bits (266), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 70/101 (69%), Gaps = 2/101 (1%)
Query: 81 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNI 140
VTD+ +++ V S LV+FWA WCGPC+MIAP +EELA +Y GK KL+ D++P+
Sbjct: 6 VTDADFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPST 63
Query: 141 ATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 181
A KY + SIPT++ FK+G+ + ++G PK L+ LDK++
Sbjct: 64 AAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 104
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.129 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,385,987
Number of Sequences: 539616
Number of extensions: 2273622
Number of successful extensions: 6500
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 415
Number of HSP's successfully gapped in prelim test: 106
Number of HSP's that attempted gapping in prelim test: 5733
Number of HSP's gapped (non-prelim): 637
length of query: 182
length of database: 191,569,459
effective HSP length: 110
effective length of query: 72
effective length of database: 132,211,699
effective search space: 9519242328
effective search space used: 9519242328
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)