Your job contains 1 sequence.
>030174
MASDKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG
IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
STGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI
GA
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 030174
(182 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2052432 - symbol:RPL16A "ribosomal protein lar... 794 5.4e-79 1
TAIR|locus:2099024 - symbol:AT3G58700 species:3702 "Arabi... 794 5.4e-79 1
TAIR|locus:2124112 - symbol:RPL16B "ribosomal protein L16... 794 5.4e-79 1
TAIR|locus:505006673 - symbol:AT5G45775 species:3702 "Ara... 794 5.4e-79 1
GENEDB_PFALCIPARUM|PF07_0079 - symbol:PF07_0079 "60S ribo... 610 1.7e-59 1
UNIPROTKB|Q8IBQ6 - symbol:PF07_0079 "60S ribosomal protei... 610 1.7e-59 1
UNIPROTKB|Q3T087 - symbol:RPL11 "60S ribosomal protein L1... 608 2.7e-59 1
UNIPROTKB|E2R9G7 - symbol:RPL11 "Uncharacterized protein"... 608 2.7e-59 1
UNIPROTKB|P62913 - symbol:RPL11 "60S ribosomal protein L1... 608 2.7e-59 1
UNIPROTKB|I3LD74 - symbol:RPL11 "60S ribosomal protein L1... 608 2.7e-59 1
UNIPROTKB|Q5RC11 - symbol:RPL11 "60S ribosomal protein L1... 608 2.7e-59 1
UNIPROTKB|Q6QMZ8 - symbol:RPL11 "60S ribosomal protein L1... 608 2.7e-59 1
MGI|MGI:1914275 - symbol:Rpl11 "ribosomal protein L11" sp... 608 2.7e-59 1
RGD|1308681 - symbol:Rpl11 "ribosomal protein L11" specie... 608 2.7e-59 1
WB|WBGene00004423 - symbol:rpl-11.2 species:6239 "Caenorh... 608 2.7e-59 1
ZFIN|ZDB-GENE-040625-147 - symbol:rpl11 "ribosomal protei... 608 2.7e-59 1
FB|FBgn0013325 - symbol:RpL11 "Ribosomal protein L11" spe... 606 4.5e-59 1
UNIPROTKB|E1C3K3 - symbol:RPL11 "Uncharacterized protein"... 606 4.5e-59 1
POMBASE|SPAC26A3.07c - symbol:rpl1101 "60S ribosomal prot... 604 7.3e-59 1
POMBASE|SPBC17G9.10 - symbol:rpl1102 "60S ribosomal prote... 604 7.3e-59 1
UNIPROTKB|Q29205 - symbol:RPL11 "60S ribosomal protein L1... 603 9.3e-59 1
UNIPROTKB|F2Z3S4 - symbol:Rpl11 "60S ribosomal protein L1... 602 1.2e-58 1
WB|WBGene00004422 - symbol:rpl-11.1 species:6239 "Caenorh... 601 1.5e-58 1
UNIPROTKB|Q90YV7 - symbol:rpl11 "60S ribosomal protein L1... 597 4.0e-58 1
ASPGD|ASPL0000072443 - symbol:AN4475 species:162425 "Emer... 583 1.2e-56 1
UNIPROTKB|Q5VVC8 - symbol:RPL11 "60S ribosomal protein L1... 578 4.2e-56 1
SGD|S000006306 - symbol:RPL11A "Ribosomal 60S subunit pro... 575 8.6e-56 1
SGD|S000003317 - symbol:RPL11B "Ribosomal 60S subunit pro... 575 8.6e-56 1
DICTYBASE|DDB_G0279189 - symbol:rpl11 "S60 ribosomal prot... 570 2.9e-55 1
UNIPROTKB|F1NYL7 - symbol:RPL11 "Uncharacterized protein"... 529 6.5e-51 1
UNIPROTKB|Q5VVC9 - symbol:RPL11 "60S ribosomal protein L1... 525 1.7e-50 1
UNIPROTKB|E2QTG3 - symbol:E2QTG3 "Uncharacterized protein... 518 9.5e-50 1
UNIPROTKB|F1LVT8 - symbol:F1LVT8 "Uncharacterized protein... 366 1.2e-33 1
UNIPROTKB|E2R6N0 - symbol:E2R6N0 "Uncharacterized protein... 325 2.7e-29 1
UNIPROTKB|F6XQS3 - symbol:F6XQS3 "Uncharacterized protein... 314 3.9e-28 1
UNIPROTKB|F1LZM9 - symbol:F1LZM9 "Uncharacterized protein... 292 8.4e-26 1
UNIPROTKB|F1M7C1 - symbol:F1M7C1 "Uncharacterized protein... 280 1.6e-24 1
UNIPROTKB|P62399 - symbol:rplE "50S ribosomal subunit pro... 161 6.4e-12 1
UNIPROTKB|Q9KNZ6 - symbol:rplE "50S ribosomal protein L5"... 155 2.8e-11 1
TIGR_CMR|VC_2584 - symbol:VC_2584 "ribosomal protein L5" ... 155 2.8e-11 1
TIGR_CMR|SO_0243 - symbol:SO_0243 "ribosomal protein L5" ... 151 7.4e-11 1
TIGR_CMR|ECH_0421 - symbol:ECH_0421 "ribosomal protein L5... 147 2.0e-10 1
TIGR_CMR|BA_0122 - symbol:BA_0122 "ribosomal protein L5" ... 146 2.5e-10 1
TIGR_CMR|CPS_0613 - symbol:CPS_0613 "ribosomal protein L5... 145 3.2e-10 1
TIGR_CMR|APH_0292 - symbol:APH_0292 "ribosomal protein L5... 144 4.1e-10 1
TIGR_CMR|GSU_2845 - symbol:GSU_2845 "ribosomal protein L5... 144 4.1e-10 1
UNIPROTKB|Q3A9S8 - symbol:rplE "50S ribosomal protein L5"... 141 8.4e-10 1
TIGR_CMR|CHY_2297 - symbol:CHY_2297 "ribosomal protein L5... 141 8.4e-10 1
TIGR_CMR|SPO_0497 - symbol:SPO_0497 "ribosomal protein L5... 141 8.4e-10 1
TIGR_CMR|CBU_0250 - symbol:CBU_0250 "ribosomal protein L5... 138 1.8e-09 1
TIGR_CMR|CJE_1863 - symbol:CJE_1863 "ribosomal protein L5... 130 1.2e-08 1
TIGR_CMR|NSE_0278 - symbol:NSE_0278 "ribosomal protein L5... 127 2.6e-08 1
TAIR|locus:2124978 - symbol:AT4G01310 species:3702 "Arabi... 124 1.5e-07 1
UNIPROTKB|P62403 - symbol:rplE "50S ribosomal protein L5"... 119 4.1e-07 1
TIGR_CMR|DET_0486 - symbol:DET_0486 "ribosomal protein L5... 108 4.6e-05 1
>TAIR|locus:2052432 [details] [associations]
symbol:RPL16A "ribosomal protein large subunit 16A"
species:3702 "Arabidopsis thaliana" [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA;ISS;TAS] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISS;IDA;TAS] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0005773 "vacuole" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=RCA] [GO:0001510 "RNA methylation"
evidence=RCA] InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281
Pfam:PF00673 PIRSF:PIRSF002161 PROSITE:PS00358 GO:GO:0009506
GO:GO:0009507 GO:GO:0005773 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005730 GO:GO:0006412 GO:GO:0003735 EMBL:AC006931
GO:GO:0019843 GO:GO:0022625 eggNOG:COG0094 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282 EMBL:X81799
EMBL:AY074636 IPI:IPI00547807 PIR:F84857 RefSeq:NP_850376.2
UniGene:At.50823 ProteinModelPortal:P42795 SMR:P42795 STRING:P42795
PRIDE:P42795 ProMEX:P42795 EnsemblPlants:AT2G42740.1 GeneID:818874
KEGG:ath:AT2G42740 GeneFarm:167 TAIR:At2g42740 HOGENOM:HOG000231312
InParanoid:P42795 KO:K02868 OMA:HMGVGES PhylomeDB:P42795
ProtClustDB:CLSN2684740 Genevestigator:P42795 GermOnline:AT2G42740
Uniprot:P42795
Length = 182
Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
Identities = 157/180 (87%), Positives = 163/180 (90%)
Query: 1 MASDKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 60
MAS+KKLSNPMR+IKVQKLVLNISVGESGDRLTRA+KVLEQLSGQTPVFSKARYTVRSFG
Sbjct: 1 MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 60
Query: 61 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
IRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
Query: 121 STGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
STGIYGMDF+VVLE IQHRVTK+DAMKWFQVKYEGVILNKSQNI
Sbjct: 121 STGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 180
>TAIR|locus:2099024 [details] [associations]
symbol:AT3G58700 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=ISS;IDA] [GO:0005773 "vacuole"
evidence=IDA] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0005829 "cytosol" evidence=RCA] [GO:0005794 "Golgi apparatus"
evidence=RCA] [GO:0001510 "RNA methylation" evidence=RCA]
InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673
PIRSF:PIRSF002161 PROSITE:PS00358 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005773 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0016020 EMBL:AL161549 GO:GO:0006412 GO:GO:0003735
GO:GO:0019843 EMBL:AL035526 EMBL:AL353032 EMBL:AB012245
GO:GO:0022625 eggNOG:COG0094 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 HOGENOM:HOG000231312 KO:K02868
ProtClustDB:CLSN2684740 EMBL:X81798 EMBL:X81800 EMBL:AF326876
EMBL:AF339697 EMBL:AY039570 EMBL:AY129487 EMBL:AF385722
EMBL:AY078021 EMBL:AY085232 EMBL:AY086211 EMBL:AY086300 EMBL:Z29034
IPI:IPI00537168 IPI:IPI00541507 PIR:S49033 PIR:T49153
RefSeq:NP_191429.1 RefSeq:NP_567563.1 RefSeq:NP_568649.2
RefSeq:NP_851137.1 UniGene:At.18929 UniGene:At.22889
ProteinModelPortal:P42794 SMR:P42794 STRING:P42794
EnsemblPlants:AT3G58700.1 EnsemblPlants:AT4G18730.1
EnsemblPlants:AT5G45775.2 GeneID:825039 GeneID:827607 GeneID:834617
KEGG:ath:AT3G58700 KEGG:ath:AT4G18730 KEGG:ath:AT5G45775
GeneFarm:173 GeneFarm:174 GeneFarm:220 TAIR:At3g58700
TAIR:At4g18730 TAIR:At5g45775 InParanoid:P42794 OMA:KPKTKKN
PhylomeDB:P42794 Genevestigator:P42794 GermOnline:AT3G58700
Uniprot:P42794
Length = 182
Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
Identities = 157/180 (87%), Positives = 163/180 (90%)
Query: 1 MASDKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 60
MAS+KKLSNPMR+IKVQKLVLNISVGESGDRLTRA+KVLEQLSGQTPVFSKARYTVRSFG
Sbjct: 1 MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 60
Query: 61 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
IRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
Query: 121 STGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
STGIYGMDF+VVLE IQHRVTK+DAMKWFQVKYEGVILNKSQNI
Sbjct: 121 STGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 180
>TAIR|locus:2124112 [details] [associations]
symbol:RPL16B "ribosomal protein L16B" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA;ISS;TAS] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISS;IDA;TAS] [GO:0005773 "vacuole" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0005794 "Golgi apparatus" evidence=RCA]
InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673
PIRSF:PIRSF002161 PROSITE:PS00358 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005773 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0016020 EMBL:AL161549 GO:GO:0006412 GO:GO:0003735
GO:GO:0019843 EMBL:AL035526 EMBL:AL353032 EMBL:AB012245
GO:GO:0022625 eggNOG:COG0094 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 HOGENOM:HOG000231312 KO:K02868
ProtClustDB:CLSN2684740 EMBL:X81798 EMBL:X81800 EMBL:AF326876
EMBL:AF339697 EMBL:AY039570 EMBL:AY129487 EMBL:AF385722
EMBL:AY078021 EMBL:AY085232 EMBL:AY086211 EMBL:AY086300 EMBL:Z29034
IPI:IPI00537168 IPI:IPI00541507 PIR:S49033 PIR:T49153
RefSeq:NP_191429.1 RefSeq:NP_567563.1 RefSeq:NP_568649.2
RefSeq:NP_851137.1 UniGene:At.18929 UniGene:At.22889
ProteinModelPortal:P42794 SMR:P42794 STRING:P42794
EnsemblPlants:AT3G58700.1 EnsemblPlants:AT4G18730.1
EnsemblPlants:AT5G45775.2 GeneID:825039 GeneID:827607 GeneID:834617
KEGG:ath:AT3G58700 KEGG:ath:AT4G18730 KEGG:ath:AT5G45775
GeneFarm:173 GeneFarm:174 GeneFarm:220 TAIR:At3g58700
TAIR:At4g18730 TAIR:At5g45775 InParanoid:P42794 OMA:KPKTKKN
PhylomeDB:P42794 Genevestigator:P42794 GermOnline:AT3G58700
Uniprot:P42794
Length = 182
Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
Identities = 157/180 (87%), Positives = 163/180 (90%)
Query: 1 MASDKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 60
MAS+KKLSNPMR+IKVQKLVLNISVGESGDRLTRA+KVLEQLSGQTPVFSKARYTVRSFG
Sbjct: 1 MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 60
Query: 61 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
IRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
Query: 121 STGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
STGIYGMDF+VVLE IQHRVTK+DAMKWFQVKYEGVILNKSQNI
Sbjct: 121 STGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 180
>TAIR|locus:505006673 [details] [associations]
symbol:AT5G45775 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=ISS] [GO:0005773 "vacuole"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA] [GO:0005794
"Golgi apparatus" evidence=RCA] InterPro:IPR002132
InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016020 EMBL:AL161549 GO:GO:0006412
GO:GO:0003735 GO:GO:0019843 EMBL:AL035526 EMBL:AL353032
EMBL:AB012245 GO:GO:0022625 eggNOG:COG0094 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282
HOGENOM:HOG000231312 KO:K02868 ProtClustDB:CLSN2684740 EMBL:X81798
EMBL:X81800 EMBL:AF326876 EMBL:AF339697 EMBL:AY039570 EMBL:AY129487
EMBL:AF385722 EMBL:AY078021 EMBL:AY085232 EMBL:AY086211
EMBL:AY086300 EMBL:Z29034 IPI:IPI00537168 IPI:IPI00541507
PIR:S49033 PIR:T49153 RefSeq:NP_191429.1 RefSeq:NP_567563.1
RefSeq:NP_568649.2 RefSeq:NP_851137.1 UniGene:At.18929
UniGene:At.22889 ProteinModelPortal:P42794 SMR:P42794 STRING:P42794
EnsemblPlants:AT3G58700.1 EnsemblPlants:AT4G18730.1
EnsemblPlants:AT5G45775.2 GeneID:825039 GeneID:827607 GeneID:834617
KEGG:ath:AT3G58700 KEGG:ath:AT4G18730 KEGG:ath:AT5G45775
GeneFarm:173 GeneFarm:174 GeneFarm:220 TAIR:At3g58700
TAIR:At4g18730 TAIR:At5g45775 InParanoid:P42794 OMA:KPKTKKN
PhylomeDB:P42794 Genevestigator:P42794 GermOnline:AT3G58700
Uniprot:P42794
Length = 182
Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
Identities = 157/180 (87%), Positives = 163/180 (90%)
Query: 1 MASDKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 60
MAS+KKLSNPMR+IKVQKLVLNISVGESGDRLTRA+KVLEQLSGQTPVFSKARYTVRSFG
Sbjct: 1 MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 60
Query: 61 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
IRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
Query: 121 STGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
STGIYGMDF+VVLE IQHRVTK+DAMKWFQVKYEGVILNKSQNI
Sbjct: 121 STGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 180
>GENEDB_PFALCIPARUM|PF07_0079 [details] [associations]
symbol:PF07_0079 "60S ribosomal protein L11a,
putative" species:5833 "Plasmodium falciparum" [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS]
InterPro:IPR002132 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
GO:GO:0006412 GO:GO:0003735 EMBL:AL844506 GO:GO:0022625
Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 HOGENOM:HOG000231312 KO:K02868 OMA:HMGVGES
ProtClustDB:PTZ00156 HSSP:P41201 RefSeq:XP_001349097.1
ProteinModelPortal:Q8IBQ6 SMR:Q8IBQ6 PRIDE:Q8IBQ6
EnsemblProtists:PF07_0079:mRNA GeneID:2655123 KEGG:pfa:PF07_0079
EuPathDB:PlasmoDB:PF3D7_0719600 Uniprot:Q8IBQ6
Length = 173
Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
Identities = 116/171 (67%), Positives = 135/171 (78%)
Query: 4 DKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRR 63
+ K N MREIKV KLVLNI VGESGDRLTRAA+VLEQL+ Q P+F K R+T+RSFG+RR
Sbjct: 2 ENKEQNVMREIKVNKLVLNICVGESGDRLTRAARVLEQLTEQKPIFGKCRFTIRSFGVRR 61
Query: 64 NEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTG 123
NEKI+C+VTVRG KA+++LE GLKVKEYEL R+NFSDTG FGFGIQEHIDLGIKYDPSTG
Sbjct: 62 NEKISCFVTVRGKKALEILEKGLKVKEYELRRKNFSDTGNFGFGIQEHIDLGIKYDPSTG 121
Query: 124 IYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVIL 174
IYGMDF+V L H+VTKEDAMKWFQ K++G++L
Sbjct: 122 IYGMDFYVHLSRSGYRVTRRTRRRSKISKTHKVTKEDAMKWFQTKFDGILL 172
>UNIPROTKB|Q8IBQ6 [details] [associations]
symbol:PF07_0079 "60S ribosomal protein L11a, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISS] InterPro:IPR002132
Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161 GO:GO:0006412
GO:GO:0003735 EMBL:AL844506 GO:GO:0022625 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282
HOGENOM:HOG000231312 KO:K02868 OMA:HMGVGES ProtClustDB:PTZ00156
HSSP:P41201 RefSeq:XP_001349097.1 ProteinModelPortal:Q8IBQ6
SMR:Q8IBQ6 PRIDE:Q8IBQ6 EnsemblProtists:PF07_0079:mRNA
GeneID:2655123 KEGG:pfa:PF07_0079 EuPathDB:PlasmoDB:PF3D7_0719600
Uniprot:Q8IBQ6
Length = 173
Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
Identities = 116/171 (67%), Positives = 135/171 (78%)
Query: 4 DKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRR 63
+ K N MREIKV KLVLNI VGESGDRLTRAA+VLEQL+ Q P+F K R+T+RSFG+RR
Sbjct: 2 ENKEQNVMREIKVNKLVLNICVGESGDRLTRAARVLEQLTEQKPIFGKCRFTIRSFGVRR 61
Query: 64 NEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTG 123
NEKI+C+VTVRG KA+++LE GLKVKEYEL R+NFSDTG FGFGIQEHIDLGIKYDPSTG
Sbjct: 62 NEKISCFVTVRGKKALEILEKGLKVKEYELRRKNFSDTGNFGFGIQEHIDLGIKYDPSTG 121
Query: 124 IYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVIL 174
IYGMDF+V L H+VTKEDAMKWFQ K++G++L
Sbjct: 122 IYGMDFYVHLSRSGYRVTRRTRRRSKISKTHKVTKEDAMKWFQTKFDGILL 172
>UNIPROTKB|Q3T087 [details] [associations]
symbol:RPL11 "60S ribosomal protein L11" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=ISS] [GO:0034504 "protein
localization to nucleus" evidence=ISS] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=IEA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IEA] [GO:0006605 "protein targeting"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281
Pfam:PF00673 PIRSF:PIRSF002161 PROSITE:PS00358 GO:GO:0006605
GO:GO:0005730 GO:GO:0006412 GO:GO:0003735 GO:GO:0042273
GO:GO:0019843 GO:GO:0034504 GO:GO:0006364 GO:GO:0022625
eggNOG:COG0094 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 HOGENOM:HOG000231312 KO:K02868
OMA:HMGVGES GeneTree:ENSGT00390000013411 EMBL:BC102524
IPI:IPI00688640 RefSeq:NP_001069049.1 UniGene:Bt.19271
ProteinModelPortal:Q3T087 SMR:Q3T087 STRING:Q3T087 PRIDE:Q3T087
Ensembl:ENSBTAT00000027850 GeneID:512745 KEGG:bta:512745 CTD:6135
HOVERGEN:HBG055214 InParanoid:Q3T087 OrthoDB:EOG4BG8X4
NextBio:20870541 Uniprot:Q3T087
Length = 178
Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
Identities = 119/175 (68%), Positives = 140/175 (80%)
Query: 1 MASDK-KLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSF 59
MA D+ + NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSF
Sbjct: 1 MAQDQGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSF 60
Query: 60 GIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYD 119
GIRRNEKIA + TVRG KA ++LE GLKV+EYEL + NFSDTG FGFGIQEHIDLGIKYD
Sbjct: 61 GIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYD 120
Query: 120 PSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVIL 174
PS GIYG+DF+VVL +HR++KE+AM+WFQ KY+G+IL
Sbjct: 121 PSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIIL 175
>UNIPROTKB|E2R9G7 [details] [associations]
symbol:RPL11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002132 InterPro:IPR020929
Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161 PROSITE:PS00358
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282 KO:K02868
OMA:HMGVGES GeneTree:ENSGT00390000013411 CTD:6135 EMBL:AAEX03001751
RefSeq:NP_001240835.1 ProteinModelPortal:E2R9G7
Ensembl:ENSCAFT00000035556 GeneID:100684296 KEGG:cfa:100684296
Uniprot:E2R9G7
Length = 178
Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
Identities = 119/175 (68%), Positives = 140/175 (80%)
Query: 1 MASDK-KLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSF 59
MA D+ + NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSF
Sbjct: 1 MAQDQGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSF 60
Query: 60 GIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYD 119
GIRRNEKIA + TVRG KA ++LE GLKV+EYEL + NFSDTG FGFGIQEHIDLGIKYD
Sbjct: 61 GIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYD 120
Query: 120 PSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVIL 174
PS GIYG+DF+VVL +HR++KE+AM+WFQ KY+G+IL
Sbjct: 121 PSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIIL 175
>UNIPROTKB|P62913 [details] [associations]
symbol:RPL11 "60S ribosomal protein L11" species:9606 "Homo
sapiens" [GO:0019843 "rRNA binding" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0042273 "ribosomal large subunit
biogenesis" evidence=IMP] [GO:0006605 "protein targeting"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0034504 "protein
localization to nucleus" evidence=ISS] [GO:0006412 "translation"
evidence=NAS;TAS] [GO:0003735 "structural constituent of ribosome"
evidence=NAS] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IDA] [GO:0003723 "RNA binding" evidence=TAS] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006413 "translational initiation" evidence=TAS] [GO:0006414
"translational elongation" evidence=TAS] [GO:0006415 "translational
termination" evidence=TAS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0019058 "viral infectious cycle" evidence=TAS] [GO:0019083
"viral transcription" evidence=TAS] [GO:0044267 "cellular protein
metabolic process" evidence=TAS] Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_17015 InterPro:IPR002132
InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 Reactome:REACT_116125 GO:GO:0005730 GO:GO:0000184
GO:GO:0006413 GO:GO:0003723 GO:GO:0003735 GO:GO:0042273
GO:GO:0019843 GO:GO:0034504 GO:GO:0006364 GO:GO:0006415
GO:GO:0006414 Reactome:REACT_1762 GO:GO:0006614 GO:GO:0022625
GO:GO:0019083 eggNOG:COG0094 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 HOGENOM:HOG000231312 KO:K02868
OMA:HMGVGES CTD:6135 HOVERGEN:HBG055214 OrthoDB:EOG4BG8X4
ChiTaRS:RPL11 EMBL:X79234 EMBL:L05092 EMBL:AF101385 EMBL:BC018970
EMBL:AF432212 EMBL:AB007171 IPI:IPI00376798 IPI:IPI00746438
PIR:S45049 RefSeq:NP_000966.2 RefSeq:NP_001186731.1
UniGene:Hs.719951 ProteinModelPortal:P62913 SMR:P62913
IntAct:P62913 MINT:MINT-1140097 STRING:P62913 PhosphoSite:P62913
DMDM:51702795 SWISS-2DPAGE:P62913 PaxDb:P62913 PRIDE:P62913
DNASU:6135 Ensembl:ENST00000374550 GeneID:6135 KEGG:hsa:6135
UCSC:uc001bhk.3 UCSC:uc001bhl.3 GeneCards:GC01P024018
HGNC:HGNC:10301 HPA:HPA002734 MIM:604175 MIM:612562
neXtProt:NX_P62913 Orphanet:124 PharmGKB:PA34664 InParanoid:P62913
PhylomeDB:P62913 GenomeRNAi:6135 NextBio:23831 PMAP-CutDB:P62913
ArrayExpress:P62913 Bgee:P62913 CleanEx:HS_RPL11
Genevestigator:P62913 GermOnline:ENSG00000142676 Uniprot:P62913
Length = 178
Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
Identities = 119/175 (68%), Positives = 140/175 (80%)
Query: 1 MASDK-KLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSF 59
MA D+ + NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSF
Sbjct: 1 MAQDQGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSF 60
Query: 60 GIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYD 119
GIRRNEKIA + TVRG KA ++LE GLKV+EYEL + NFSDTG FGFGIQEHIDLGIKYD
Sbjct: 61 GIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYD 120
Query: 120 PSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVIL 174
PS GIYG+DF+VVL +HR++KE+AM+WFQ KY+G+IL
Sbjct: 121 PSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIIL 175
>UNIPROTKB|I3LD74 [details] [associations]
symbol:RPL11 "60S ribosomal protein L11" species:9823 "Sus
scrofa" [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006605 "protein targeting" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673
PIRSF:PIRSF002161 PROSITE:PS00358 GO:GO:0006605 GO:GO:0005730
GO:GO:0006412 GO:GO:0003735 GO:GO:0042273 GO:GO:0006364
GO:GO:0022625 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 OMA:HMGVGES
GeneTree:ENSGT00390000013411 EMBL:FP475977
ProteinModelPortal:I3LD74 SMR:I3LD74 PRIDE:I3LD74
Ensembl:ENSSSCT00000022802 Uniprot:I3LD74
Length = 178
Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
Identities = 119/175 (68%), Positives = 140/175 (80%)
Query: 1 MASDK-KLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSF 59
MA D+ + NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSF
Sbjct: 1 MAQDQGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSF 60
Query: 60 GIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYD 119
GIRRNEKIA + TVRG KA ++LE GLKV+EYEL + NFSDTG FGFGIQEHIDLGIKYD
Sbjct: 61 GIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYD 120
Query: 120 PSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVIL 174
PS GIYG+DF+VVL +HR++KE+AM+WFQ KY+G+IL
Sbjct: 121 PSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIIL 175
>UNIPROTKB|Q5RC11 [details] [associations]
symbol:RPL11 "60S ribosomal protein L11" species:9601
"Pongo abelii" [GO:0005730 "nucleolus" evidence=ISS] [GO:0034504
"protein localization to nucleus" evidence=ISS] InterPro:IPR002132
InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 GO:GO:0005730 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0019843 GO:GO:0034504 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282 KO:K02868
CTD:6135 HOVERGEN:HBG055214 EMBL:CR858471 RefSeq:NP_001125385.1
UniGene:Pab.13400 HSSP:P41201 ProteinModelPortal:Q5RC11 SMR:Q5RC11
GeneID:100172290 KEGG:pon:100172290 Uniprot:Q5RC11
Length = 178
Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
Identities = 119/175 (68%), Positives = 140/175 (80%)
Query: 1 MASDK-KLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSF 59
MA D+ + NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSF
Sbjct: 1 MAQDQGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSF 60
Query: 60 GIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYD 119
GIRRNEKIA + TVRG KA ++LE GLKV+EYEL + NFSDTG FGFGIQEHIDLGIKYD
Sbjct: 61 GIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYD 120
Query: 120 PSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVIL 174
PS GIYG+DF+VVL +HR++KE+AM+WFQ KY+G+IL
Sbjct: 121 PSIGIYGLDFYVVLGRPGFSITDKKRRTGCIGAKHRISKEEAMRWFQQKYDGIIL 175
>UNIPROTKB|Q6QMZ8 [details] [associations]
symbol:RPL11 "60S ribosomal protein L11" species:34839
"Chinchilla lanigera" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0034504 "protein localization to nucleus" evidence=ISS]
InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673
PIRSF:PIRSF002161 PROSITE:PS00358 GO:GO:0005730 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 GO:GO:0034504
Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 HOVERGEN:HBG055214 EMBL:AY533222
ProteinModelPortal:Q6QMZ8 SMR:Q6QMZ8 MINT:MINT-6733032 PRIDE:Q6QMZ8
Uniprot:Q6QMZ8
Length = 178
Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
Identities = 119/175 (68%), Positives = 140/175 (80%)
Query: 1 MASDK-KLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSF 59
MA D+ + NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSF
Sbjct: 1 MAQDQGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSF 60
Query: 60 GIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYD 119
GIRRNEKIA + TVRG KA ++LE GLKV+EYEL + NFSDTG FGFGIQEHIDLGIKYD
Sbjct: 61 GIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYD 120
Query: 120 PSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVIL 174
PS GIYG+DF+VVL +HR++KE+AM+WFQ KY+G+IL
Sbjct: 121 PSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIIL 175
>MGI|MGI:1914275 [details] [associations]
symbol:Rpl11 "ribosomal protein L11" species:10090 "Mus
musculus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO;IDA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=ISO] [GO:0006412
"translation" evidence=IEA] [GO:0006605 "protein targeting"
evidence=ISO] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISO] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0034504 "protein
localization to nucleus" evidence=IMP] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=ISO] InterPro:IPR002132
InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 MGI:MGI:1914275 GO:GO:0005730 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 GO:GO:0034504
eggNOG:COG0094 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 HOGENOM:HOG000231312 KO:K02868
OMA:HMGVGES GeneTree:ENSGT00390000013411 CTD:6135
HOVERGEN:HBG055214 OrthoDB:EOG4BG8X4 EMBL:AK002998 EMBL:AK008422
EMBL:AK011211 EMBL:AK011800 EMBL:AK013923 EMBL:AK088967
EMBL:AK153486 EMBL:AK164445 EMBL:AK169053 EMBL:BC025077
EMBL:BC069896 IPI:IPI00331461 RefSeq:NP_080195.1 UniGene:Mm.276856
ProteinModelPortal:Q9CXW4 SMR:Q9CXW4 IntAct:Q9CXW4 STRING:Q9CXW4
PhosphoSite:Q9CXW4 PaxDb:Q9CXW4 PRIDE:Q9CXW4
Ensembl:ENSMUST00000102536 GeneID:67025 KEGG:mmu:67025
NextBio:323340 Bgee:Q9CXW4 CleanEx:MM_RPL11 Genevestigator:Q9CXW4
GermOnline:ENSMUSG00000070343 Uniprot:Q9CXW4
Length = 178
Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
Identities = 119/175 (68%), Positives = 140/175 (80%)
Query: 1 MASDK-KLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSF 59
MA D+ + NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSF
Sbjct: 1 MAQDQGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSF 60
Query: 60 GIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYD 119
GIRRNEKIA + TVRG KA ++LE GLKV+EYEL + NFSDTG FGFGIQEHIDLGIKYD
Sbjct: 61 GIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYD 120
Query: 120 PSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVIL 174
PS GIYG+DF+VVL +HR++KE+AM+WFQ KY+G+IL
Sbjct: 121 PSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIIL 175
>RGD|1308681 [details] [associations]
symbol:Rpl11 "ribosomal protein L11" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO;ISS] [GO:0006364
"rRNA processing" evidence=IEA;ISO] [GO:0006412 "translation"
evidence=IEA] [GO:0006605 "protein targeting" evidence=IEA;ISO]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=IEA;ISO] [GO:0034504 "protein
localization to nucleus" evidence=ISO;ISS] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IEA;ISO] InterPro:IPR002132
InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 RGD:1308681 GO:GO:0005730 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 GO:GO:0034504
eggNOG:COG0094 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 HOGENOM:HOG000231312
GeneTree:ENSGT00390000013411 HOVERGEN:HBG055214 OrthoDB:EOG4BG8X4
EMBL:X62146 IPI:IPI00359103 PIR:JT0606 UniGene:Rn.129770
UniGene:Rn.14687 ProteinModelPortal:P62914 SMR:P62914 IntAct:P62914
STRING:P62914 PRIDE:P62914 Ensembl:ENSRNOT00000030043
UCSC:RGD:1308681 InParanoid:P62914 ArrayExpress:P62914
Genevestigator:P62914 GermOnline:ENSRNOG00000026260 Uniprot:P62914
Length = 178
Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
Identities = 119/175 (68%), Positives = 140/175 (80%)
Query: 1 MASDK-KLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSF 59
MA D+ + NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSF
Sbjct: 1 MAQDQGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSF 60
Query: 60 GIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYD 119
GIRRNEKIA + TVRG KA ++LE GLKV+EYEL + NFSDTG FGFGIQEHIDLGIKYD
Sbjct: 61 GIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYD 120
Query: 120 PSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVIL 174
PS GIYG+DF+VVL +HR++KE+AM+WFQ KY+G+IL
Sbjct: 121 PSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIIL 175
>WB|WBGene00004423 [details] [associations]
symbol:rpl-11.2 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP]
InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673
PIRSF:PIRSF002161 PROSITE:PS00358 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0006412 GO:GO:0000003 GO:GO:0005840
GO:GO:0003735 eggNOG:COG0094 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 HOGENOM:HOG000231312 KO:K02868
OMA:HMGVGES GeneTree:ENSGT00390000013411 HSSP:P41201 EMBL:FO080099
PIR:T29860 RefSeq:NP_508413.1 ProteinModelPortal:Q19162 SMR:Q19162
DIP:DIP-26065N MINT:MINT-1118628 STRING:Q19162 PaxDb:Q19162
EnsemblMetazoa:F07D10.1.1 EnsemblMetazoa:F07D10.1.2 GeneID:180535
KEGG:cel:CELE_F07D10.1 UCSC:F07D10.1.1 CTD:180535 WormBase:F07D10.1
InParanoid:Q19162 NextBio:909780 Uniprot:Q19162
Length = 196
Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
Identities = 118/171 (69%), Positives = 136/171 (79%)
Query: 4 DKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRR 63
+KK N MRE+K+QKL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVR+FGIRR
Sbjct: 12 EKKARNVMRELKIQKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRTFGIRR 71
Query: 64 NEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTG 123
NEKIA + TVRG KA ++LE GLKVKEYEL + NFSDTG FGFG+QEHIDLGIKYDPS G
Sbjct: 72 NEKIAVHCTVRGPKAEEILEKGLKVKEYELYKENFSDTGNFGFGVQEHIDLGIKYDPSIG 131
Query: 124 IYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVIL 174
IYGMDF+VVL+ HRV +E+++KWFQ KY+G+IL
Sbjct: 132 IYGMDFYVVLDRAGRRIAKRRRAPGRVGPSHRVEREESIKWFQQKYDGIIL 182
>ZFIN|ZDB-GENE-040625-147 [details] [associations]
symbol:rpl11 "ribosomal protein L11" species:7955
"Danio rerio" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0009790 "embryo development" evidence=IMP] [GO:0042593 "glucose
homeostasis" evidence=IMP] [GO:0030218 "erythrocyte
differentiation" evidence=IMP] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0006917 "induction of apoptosis"
evidence=IMP] InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281
Pfam:PF00673 PIRSF:PIRSF002161 PROSITE:PS00358
ZFIN:ZDB-GENE-040625-147 GO:GO:0006917 GO:GO:0006412 GO:GO:0042593
GO:GO:0005840 GO:GO:0009790 GO:GO:0030218 GO:GO:0003735
eggNOG:COG0094 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 HOGENOM:HOG000231312 KO:K02868
OMA:HMGVGES GeneTree:ENSGT00390000013411 CTD:6135
HOVERGEN:HBG055214 OrthoDB:EOG4BG8X4 EMBL:CABZ01086825
EMBL:BC071420 EMBL:AY648841 IPI:IPI00492905 RefSeq:NP_001002139.1
UniGene:Dr.32573 SMR:Q6IQI6 STRING:Q6IQI6
Ensembl:ENSDART00000063870 GeneID:415229 KEGG:dre:415229
InParanoid:Q6IQI6 NextBio:20818895 Uniprot:Q6IQI6
Length = 178
Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
Identities = 119/172 (69%), Positives = 138/172 (80%)
Query: 3 SDKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIR 62
S+KK NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSFGIR
Sbjct: 5 SEKK-ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIR 63
Query: 63 RNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPST 122
RNEKIA + TVRG KA ++LE GLKV+EYEL + NFSDTG FGFGIQEHIDLGIKYDPS
Sbjct: 64 RNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSI 123
Query: 123 GIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVIL 174
GIYG+DF+VVL +HR+ KE+AM+WFQ KY+G+IL
Sbjct: 124 GIYGLDFYVVLGRPGFSIADKKRKTGRIGAKHRIRKEEAMRWFQQKYDGIIL 175
>FB|FBgn0013325 [details] [associations]
symbol:RpL11 "Ribosomal protein L11" species:7227 "Drosophila
melanogaster" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=NAS] [GO:0003735 "structural constituent of ribosome"
evidence=IDA;NAS] [GO:0006412 "translation" evidence=IEA;NAS]
[GO:0005840 "ribosome" evidence=IDA;NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0000022 "mitotic spindle elongation" evidence=IMP] [GO:0051298
"centrosome duplication" evidence=IMP] InterPro:IPR002132
InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 EMBL:AE013599 GO:GO:0051298 GO:GO:0005811
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
GO:GO:0000022 eggNOG:COG0094 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 KO:K02868 OMA:HMGVGES
GeneTree:ENSGT00390000013411 CTD:6135 EMBL:U15643 EMBL:AY094790
PIR:S60245 RefSeq:NP_477054.1 UniGene:Dm.700
ProteinModelPortal:P46222 SMR:P46222 DIP:DIP-18297N IntAct:P46222
MINT:MINT-767987 STRING:P46222 PaxDb:P46222 PRIDE:P46222
EnsemblMetazoa:FBtr0086533 GeneID:37235 KEGG:dme:Dmel_CG7726
FlyBase:FBgn0013325 InParanoid:P46222 OrthoDB:EOG4D7WNX
PhylomeDB:P46222 ChiTaRS:RPL11 GenomeRNAi:37235 NextBio:802670
GermOnline:CG7726 Uniprot:P46222
Length = 184
Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
Identities = 119/167 (71%), Positives = 133/167 (79%)
Query: 9 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIA 68
NPMR++ ++KL LNI VGESGDRLTRAAKVLEQL+GQ PVFSKARYTVRSFGIRRNEKIA
Sbjct: 15 NPMRDLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 74
Query: 69 CYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMD 128
+ TVRG KA ++LE GLKV+EYEL R NFS TG FGFGIQEHIDLGIKYDPS GIYG+D
Sbjct: 75 VHCTVRGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHIDLGIKYDPSIGIYGLD 134
Query: 129 FFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVILN 175
F+VVL QHR+TKEDAMKWFQ KY+G+ILN
Sbjct: 135 FYVVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWFQQKYDGIILN 181
>UNIPROTKB|E1C3K3 [details] [associations]
symbol:RPL11 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0006605 "protein targeting" evidence=IEA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IEA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IEA]
InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673
PIRSF:PIRSF002161 PROSITE:PS00358 GO:GO:0006605 GO:GO:0005730
GO:GO:0006412 GO:GO:0003735 GO:GO:0042273 GO:GO:0006364
GO:GO:0022625 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 OMA:HMGVGES
GeneTree:ENSGT00390000013411 EMBL:AADN02043724 IPI:IPI00602500
PRIDE:E1C3K3 Ensembl:ENSGALT00000006305 ArrayExpress:E1C3K3
Uniprot:E1C3K3
Length = 178
Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
Identities = 119/175 (68%), Positives = 139/175 (79%)
Query: 1 MASDK-KLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSF 59
MA D+ + NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSF
Sbjct: 1 MAQDQGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSF 60
Query: 60 GIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYD 119
GIRRNEKIA + TVRG KA ++LE GLKV+EYEL + NFSDTG FGFGIQEHIDLGIKYD
Sbjct: 61 GIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYD 120
Query: 120 PSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVIL 174
PS GIYG+DF+VVL +HR+ KE+AM+WFQ KY+G+IL
Sbjct: 121 PSIGIYGLDFYVVLGRPGFSIADKKRRTGNIGAKHRIGKEEAMRWFQQKYDGIIL 175
>POMBASE|SPAC26A3.07c [details] [associations]
symbol:rpl1101 "60S ribosomal protein L11 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO] [GO:0042254 "ribosome biogenesis" evidence=ISO]
InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673
PIRSF:PIRSF002161 PROSITE:PS00358 PomBase:SPBC17G9.10
PomBase:SPAC26A3.07c EMBL:CU329670 GenomeReviews:CU329670_GR
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0042254 GO:GO:0003735
GO:GO:0002181 GO:GO:0019843 GO:GO:0022627 eggNOG:COG0094
Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 HOGENOM:HOG000231312 KO:K02868 OMA:HMGVGES
OrthoDB:EOG4M0JB6 EMBL:AB016005 EMBL:AF201080 PIR:T38395
RefSeq:NP_594150.1 RefSeq:NP_595899.1 ProteinModelPortal:Q10157
SMR:Q10157 STRING:Q10157 EnsemblFungi:SPAC26A3.07c.1
EnsemblFungi:SPBC17G9.10.1 GeneID:2539846 GeneID:2541591
KEGG:spo:SPAC26A3.07c KEGG:spo:SPBC17G9.10 NextBio:20800993
Uniprot:Q10157
Length = 174
Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
Identities = 115/172 (66%), Positives = 135/172 (78%)
Query: 5 KKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRN 64
+K NPM+E+++ KLVLNIS+GESGDRLTRAAKVLEQLSGQTPVFSKARYT+R FGIRRN
Sbjct: 3 EKAQNPMKELRISKLVLNISLGESGDRLTRAAKVLEQLSGQTPVFSKARYTIRRFGIRRN 62
Query: 65 EKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGI 124
EKIAC+VTVRG KA ++LE GLKVKEYEL +RNFS TG FGFGIQEHIDLGIKYDPS GI
Sbjct: 63 EKIACHVTVRGPKAEEILERGLKVKEYELKKRNFSATGNFGFGIQEHIDLGIKYDPSIGI 122
Query: 125 YGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVILNK 176
YGMDF+VV++ H++ ED + WF+ KY+ V+L K
Sbjct: 123 YGMDFYVVMDRPGMRVARRKAQRGRVGYTHKINAEDTINWFKQKYDAVVLGK 174
>POMBASE|SPBC17G9.10 [details] [associations]
symbol:rpl1102 "60S ribosomal protein L11 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISO] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR002132 InterPro:IPR020929
Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161 PROSITE:PS00358
PomBase:SPBC17G9.10 PomBase:SPAC26A3.07c EMBL:CU329670
GenomeReviews:CU329670_GR EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0042254 GO:GO:0003735 GO:GO:0002181 GO:GO:0019843
GO:GO:0022627 eggNOG:COG0094 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 HOGENOM:HOG000231312 KO:K02868
OMA:HMGVGES OrthoDB:EOG4M0JB6 EMBL:AB016005 EMBL:AF201080
PIR:T38395 RefSeq:NP_594150.1 RefSeq:NP_595899.1
ProteinModelPortal:Q10157 SMR:Q10157 STRING:Q10157
EnsemblFungi:SPAC26A3.07c.1 EnsemblFungi:SPBC17G9.10.1
GeneID:2539846 GeneID:2541591 KEGG:spo:SPAC26A3.07c
KEGG:spo:SPBC17G9.10 NextBio:20800993 Uniprot:Q10157
Length = 174
Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
Identities = 115/172 (66%), Positives = 135/172 (78%)
Query: 5 KKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRN 64
+K NPM+E+++ KLVLNIS+GESGDRLTRAAKVLEQLSGQTPVFSKARYT+R FGIRRN
Sbjct: 3 EKAQNPMKELRISKLVLNISLGESGDRLTRAAKVLEQLSGQTPVFSKARYTIRRFGIRRN 62
Query: 65 EKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGI 124
EKIAC+VTVRG KA ++LE GLKVKEYEL +RNFS TG FGFGIQEHIDLGIKYDPS GI
Sbjct: 63 EKIACHVTVRGPKAEEILERGLKVKEYELKKRNFSATGNFGFGIQEHIDLGIKYDPSIGI 122
Query: 125 YGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVILNK 176
YGMDF+VV++ H++ ED + WF+ KY+ V+L K
Sbjct: 123 YGMDFYVVMDRPGMRVARRKAQRGRVGYTHKINAEDTINWFKQKYDAVVLGK 174
>UNIPROTKB|Q29205 [details] [associations]
symbol:RPL11 "60S ribosomal protein L11" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=ISS] [GO:0034504 "protein
localization to nucleus" evidence=ISS] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002132 InterPro:IPR020929
Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161 PROSITE:PS00358
GO:GO:0005730 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 GO:GO:0034504 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 KO:K02868 CTD:6135
HOVERGEN:HBG055214 EMBL:AY547313 EMBL:AY550042 EMBL:F14532
RefSeq:NP_001001638.1 UniGene:Ssc.56710 ProteinModelPortal:Q29205
SMR:Q29205 GeneID:414422 KEGG:ssc:414422 Uniprot:Q29205
Length = 178
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 118/175 (67%), Positives = 140/175 (80%)
Query: 1 MASDK-KLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSF 59
MA D+ + NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSF
Sbjct: 1 MAQDQGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSF 60
Query: 60 GIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYD 119
GIRRNEKIA + TVRG KA ++LE GLKV+EYEL + NFSDTG FGFGIQEHIDLGIKYD
Sbjct: 61 GIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYD 120
Query: 120 PSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVIL 174
PS GIYG+DF+VVL +HR++KE+AM+WFQ K++G+IL
Sbjct: 121 PSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKHDGIIL 175
>UNIPROTKB|F2Z3S4 [details] [associations]
symbol:Rpl11 "60S ribosomal protein L11" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0006605 "protein targeting"
evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281
Pfam:PF00673 PIRSF:PIRSF002161 PROSITE:PS00358 RGD:1308681
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282
IPI:IPI00779353 ProteinModelPortal:F2Z3S4
Ensembl:ENSRNOT00000039585 Uniprot:F2Z3S4
Length = 176
Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 116/166 (69%), Positives = 135/166 (81%)
Query: 9 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIA 68
NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSFGIRRNEKIA
Sbjct: 8 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIA 67
Query: 69 CYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMD 128
+ TVRG KA ++LE GLKV+EYEL + NFSDTG FGFGIQEHIDLGIKYDPS GIYG+D
Sbjct: 68 VHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLD 127
Query: 129 FFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVIL 174
F+VVL +HR++KE+AM+WFQ KY+G+IL
Sbjct: 128 FYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIIL 173
>WB|WBGene00004422 [details] [associations]
symbol:rpl-11.1 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040039 "inductive cell
migration" evidence=IMP] [GO:0007276 "gamete generation"
evidence=IMP] InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281
Pfam:PF00673 PIRSF:PIRSF002161 PROSITE:PS00358 GO:GO:0009792
GO:GO:0040010 GO:GO:0006412 GO:GO:0005840 GO:GO:0040035
GO:GO:0003735 GO:GO:0040039 GO:GO:0007276 eggNOG:COG0094
Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 HOGENOM:HOG000231312 KO:K02868 OMA:KPKTKKN
GeneTree:ENSGT00390000013411 EMBL:FO081343 PIR:T30978
RefSeq:NP_504008.1 ProteinModelPortal:Q94300 SMR:Q94300
DIP:DIP-25364N MINT:MINT-1088988 STRING:Q94300 PaxDb:Q94300
PRIDE:Q94300 EnsemblMetazoa:T22F3.4.1 EnsemblMetazoa:T22F3.4.2
GeneID:178778 KEGG:cel:CELE_T22F3.4 UCSC:T22F3.4.1 CTD:178778
WormBase:T22F3.4 InParanoid:Q94300 NextBio:902506 Uniprot:Q94300
Length = 196
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 118/171 (69%), Positives = 133/171 (77%)
Query: 4 DKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRR 63
+KK N MRE+K+QKL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVR+FGIRR
Sbjct: 12 EKKGRNVMRELKIQKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRTFGIRR 71
Query: 64 NEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTG 123
NEKIA + TVRG KA ++LE GLKVKEYEL + NFSDTG FGFG+QEHIDLGIKYDP G
Sbjct: 72 NEKIAVHCTVRGPKAEEILEKGLKVKEYELFKENFSDTGNFGFGVQEHIDLGIKYDPGIG 131
Query: 124 IYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVIL 174
IYGMDF+VVL HRV KE+ +KWFQ KY+G+IL
Sbjct: 132 IYGMDFYVVLNRNGVRVSKRRRAPGRIGPSHRVDKEETIKWFQQKYDGIIL 182
>UNIPROTKB|Q90YV7 [details] [associations]
symbol:rpl11 "60S ribosomal protein L11" species:7998
"Ictalurus punctatus" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0034504 "protein localization to nucleus" evidence=ISS]
InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673
PIRSF:PIRSF002161 PROSITE:PS00358 GO:GO:0005730 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 GO:GO:0034504
Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 HOVERGEN:HBG055214 EMBL:AF401565
RefSeq:NP_001187040.1 UniGene:Ipu.322 ProteinModelPortal:Q90YV7
SMR:Q90YV7 GeneID:100304527 Uniprot:Q90YV7
Length = 178
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 116/170 (68%), Positives = 135/170 (79%)
Query: 5 KKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRN 64
+K NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSFGIRRN
Sbjct: 6 EKKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRN 65
Query: 65 EKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGI 124
EKIA + TVRG KA ++LE GLKV+EYEL + NFSD+G FGFGIQEHIDLGIKYDPS GI
Sbjct: 66 EKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDSGNFGFGIQEHIDLGIKYDPSIGI 125
Query: 125 YGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVIL 174
YG+DF+VVL +HR+ K +AM+WFQ KY+GVIL
Sbjct: 126 YGLDFYVVLGRPGFSIADKKRKRGRIGFKHRIRKREAMRWFQQKYDGVIL 175
>ASPGD|ASPL0000072443 [details] [associations]
symbol:AN4475 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673
PIRSF:PIRSF002161 PROSITE:PS00358 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:BN001303 EMBL:AACD01000078 eggNOG:COG0094
Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 HOGENOM:HOG000231312 KO:K02868 OMA:HMGVGES
OrthoDB:EOG4M0JB6 RefSeq:XP_662079.1 ProteinModelPortal:Q5B4Q5
SMR:Q5B4Q5 STRING:Q5B4Q5 EnsemblFungi:CADANIAT00005971
GeneID:2872274 KEGG:ani:AN4475.2 Uniprot:Q5B4Q5
Length = 175
Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 113/172 (65%), Positives = 135/172 (78%)
Query: 2 ASDKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGI 61
A DK +NPMRE++VQKLVLNISVGESGDRLTRAAKVLEQLSGQTPV+SKARYTVR+FGI
Sbjct: 4 AKDKS-ANPMRELRVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGI 62
Query: 62 RRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPS 121
RRNEKIA +VTVRG KA ++LE GLKVKEYEL +RNFS+TG FGFGI EHIDLGIKYDP+
Sbjct: 63 RRNEKIAVHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIKYDPN 122
Query: 122 TGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVI 173
GIYGMDF+ + HR+ + + M+WF+ +++G+I
Sbjct: 123 IGIYGMDFYCCMTRPGERVAKRRRCKSTIGASHRINQTETMRWFKQRFDGII 174
>UNIPROTKB|Q5VVC8 [details] [associations]
symbol:RPL11 "60S ribosomal protein L11" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR002132 InterPro:IPR020929
Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161 PROSITE:PS00358
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282
HOGENOM:HOG000231312 HOVERGEN:HBG055214 ChiTaRS:RPL11
UniGene:Hs.719951 HGNC:HGNC:10301 EMBL:AL451000 SMR:Q5VVC8
Ensembl:ENST00000458455 Uniprot:Q5VVC8
Length = 174
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 113/166 (68%), Positives = 132/166 (79%)
Query: 9 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIA 68
NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSFGIRRNEKIA
Sbjct: 8 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIA 67
Query: 69 CYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMD 128
+ TVRG KA ++LE GLKV+EYEL + NFSDTG FGFGIQEHIDLGIKYDPS GIYG+D
Sbjct: 68 VHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLD 127
Query: 129 FFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVIL 174
F+VVL +HR++KE+AM+WFQ K + + L
Sbjct: 128 FYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKVKLIYL 173
>SGD|S000006306 [details] [associations]
symbol:RPL11A "Ribosomal 60S subunit protein L11A"
species:4932 "Saccharomyces cerevisiae" [GO:0000027 "ribosomal
large subunit assembly" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0002181 "cytoplasmic translation" evidence=TAS]
[GO:0003735 "structural constituent of ribosome" evidence=IEA;TAS]
[GO:0006412 "translation" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0019843 "rRNA
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=TAS] InterPro:IPR002132
InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 SGD:S000006306 EMBL:BK006949 GO:GO:0003735
GO:GO:0002181 GO:GO:0019843 GO:GO:0000027 EMBL:U32445 GO:GO:0022625
Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 PDB:1K5Y PDB:1S1I PDB:3IZS PDB:3O58 PDB:3O5H
PDB:3U5E PDB:3U5I PDBsum:1K5Y PDBsum:1S1I PDBsum:3IZS PDBsum:3O58
PDBsum:3O5H PDBsum:3U5E PDBsum:3U5I HOGENOM:HOG000231312 KO:K02868
OMA:HMGVGES EMBL:X01029 EMBL:AY693151 PIR:S59767 RefSeq:NP_015427.1
ProteinModelPortal:P0C0W9 SMR:P0C0W9 DIP:DIP-4764N IntAct:P0C0W9
MINT:MINT-564921 STRING:P0C0W9 PRIDE:P0C0W9 EnsemblFungi:YPR102C
GeneID:856217 KEGG:sce:YPR102C GeneTree:ENSGT00390000013411
OrthoDB:EOG4M0JB6 EvolutionaryTrace:P0C0W9 NextBio:981438
Genevestigator:P0C0W9 Uniprot:P0C0W9
Length = 174
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 113/171 (66%), Positives = 132/171 (77%)
Query: 6 KLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNE 65
K NPMR++K++KLVLNISVGESGDRLTRA+KVLEQLSGQTPV SKARYTVR+FGIRRNE
Sbjct: 4 KAQNPMRDLKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIRRNE 63
Query: 66 KIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIY 125
KIA +VTVRG KA ++LE GLKVKEY+L RNFS TG FGFGI EHIDLGIKYDPS GI+
Sbjct: 64 KIAVHVTVRGPKAEEILERGLKVKEYQLRDRNFSATGNFGFGIDEHIDLGIKYDPSIGIF 123
Query: 126 GMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVILNK 176
GMDF+VV+ H+ TKED + WF+ KY+ +L+K
Sbjct: 124 GMDFYVVMNRPGARVTRRKRCKGTVGNSHKTTKEDTVSWFKQKYDADVLDK 174
>SGD|S000003317 [details] [associations]
symbol:RPL11B "Ribosomal 60S subunit protein L11B"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;TAS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0002181
"cytoplasmic translation" evidence=TAS] [GO:0000027 "ribosomal
large subunit assembly" evidence=IMP] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=TAS] InterPro:IPR002132
InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 SGD:S000003317 EMBL:BK006941 GO:GO:0003735
GO:GO:0002181 GO:GO:0019843 PDB:4B6A PDBsum:4B6A GO:GO:0000027
GO:GO:0022625 eggNOG:COG0094 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 HOGENOM:HOG000231312 KO:K02868
OMA:KPKTKKN GeneTree:ENSGT00390000013411 OrthoDB:EOG4M0JB6
EMBL:Z72870 EMBL:M12933 PIR:A02764 RefSeq:NP_011599.1 PDB:2NOQ
PDBsum:2NOQ ProteinModelPortal:Q3E757 SMR:Q3E757 DIP:DIP-29386N
IntAct:Q3E757 MINT:MINT-564941 STRING:Q3E757 PaxDb:Q3E757
PRIDE:Q3E757 EnsemblFungi:YGR085C GeneID:852976 KEGG:sce:YGR085C
EvolutionaryTrace:Q3E757 NextBio:972774 Genevestigator:Q3E757
Uniprot:Q3E757
Length = 174
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 113/171 (66%), Positives = 132/171 (77%)
Query: 6 KLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNE 65
K NPMR++K++KLVLNISVGESGDRLTRA+KVLEQLSGQTPV SKARYTVR+FGIRRNE
Sbjct: 4 KAQNPMRDLKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIRRNE 63
Query: 66 KIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIY 125
KIA +VTVRG KA ++LE GLKVKEY+L RNFS TG FGFGI EHIDLGIKYDPS GI+
Sbjct: 64 KIAVHVTVRGPKAEEILERGLKVKEYQLRDRNFSATGNFGFGIDEHIDLGIKYDPSIGIF 123
Query: 126 GMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVILNK 176
GMDF+VV+ H+ TKED + WF+ KY+ +L+K
Sbjct: 124 GMDFYVVMNRPGARVTRRKRCKGTVGNSHKTTKEDTVSWFKQKYDADVLDK 174
>DICTYBASE|DDB_G0279189 [details] [associations]
symbol:rpl11 "S60 ribosomal protein L11"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR002132 InterPro:IPR020929 Pfam:PF00281 Pfam:PF00673
PIRSF:PIRSF002161 PROSITE:PS00358 dictyBase:DDB_G0279189
GO:GO:0045335 GenomeReviews:CM000152_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0019843 EMBL:AAFI02000030 eggNOG:COG0094
Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 KO:K02868 OMA:HMGVGES EMBL:X15382 PIR:S07562
RefSeq:XP_641729.1 ProteinModelPortal:P16168 SMR:P16168
STRING:P16168 PRIDE:P16168 EnsemblProtists:DDB0214853
GeneID:8621925 KEGG:ddi:DDB_G0279189 ProtClustDB:PTZ00156
Uniprot:P16168
Length = 202
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 109/169 (64%), Positives = 130/169 (76%)
Query: 6 KLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNE 65
K N MR ++++KLVLNI VGESGDRL RAAKVLEQL+GQTPV+SKARYTVRSF IRRNE
Sbjct: 30 KKDNVMRGLRIEKLVLNICVGESGDRLVRAAKVLEQLTGQTPVYSKARYTVRSFNIRRNE 89
Query: 66 KIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIY 125
+IA +VTVRG+KA ++LE GLKV+E+EL RNFS G FGFGIQEHIDLGIKYDPS GIY
Sbjct: 90 QIAAHVTVRGEKAAEILEKGLKVREFELRARNFSTQGSFGFGIQEHIDLGIKYDPSIGIY 149
Query: 126 GMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVIL 174
GMDFFVVL QH++ KEDA+ WF+ Y+G+++
Sbjct: 150 GMDFFVVLSRPGFRVAHKKRAGAKVGFQHKIGKEDAVNWFKTTYDGIVI 198
>UNIPROTKB|F1NYL7 [details] [associations]
symbol:RPL11 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR002132 InterPro:IPR020929
Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161 PROSITE:PS00358
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282
GeneTree:ENSGT00390000013411 EMBL:AADN02043724 IPI:IPI00819936
Ensembl:ENSGALT00000040531 ArrayExpress:F1NYL7 Uniprot:F1NYL7
Length = 156
Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
Identities = 102/125 (81%), Positives = 114/125 (91%)
Query: 9 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIA 68
NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSFGIRRNEKIA
Sbjct: 9 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIA 68
Query: 69 CYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMD 128
+ TVRG KA ++LE GLKV+EYEL + NFSDTG FGFGIQEHIDLGIKYDPS GIYG+D
Sbjct: 69 VHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLD 128
Query: 129 FFVVL 133
F+VVL
Sbjct: 129 FYVVL 133
>UNIPROTKB|Q5VVC9 [details] [associations]
symbol:RPL11 "60S ribosomal protein L11" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR002132 InterPro:IPR020929
Pfam:PF00281 Pfam:PF00673 PROSITE:PS00358 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 HOGENOM:HOG000231312
HOVERGEN:HBG055214 ChiTaRS:RPL11 UniGene:Hs.719951 HGNC:HGNC:10301
EMBL:AL451000 SMR:Q5VVC9 Ensembl:ENST00000443624 Uniprot:Q5VVC9
Length = 131
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 101/124 (81%), Positives = 113/124 (91%)
Query: 9 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIA 68
NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSFGIRRNEKIA
Sbjct: 8 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIA 67
Query: 69 CYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMD 128
+ TVRG KA ++LE GLKV+EYEL + NFSDTG FGFGIQEHIDLGIKYDPS GIYG+D
Sbjct: 68 VHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLD 127
Query: 129 FFVV 132
F+VV
Sbjct: 128 FYVV 131
>UNIPROTKB|E2QTG3 [details] [associations]
symbol:E2QTG3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006605 "protein targeting" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR002132 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282
GeneTree:ENSGT00390000013411 EMBL:AAEX03002730
Ensembl:ENSCAFT00000019464 Uniprot:E2QTG3
Length = 174
Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
Identities = 107/175 (61%), Positives = 128/175 (73%)
Query: 1 MASDK-KLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSF 59
MA D+ + NPM E+++ K LNI VGESGDRLTR AKVLEQL PVFSKARY VRSF
Sbjct: 1 MAQDQDEKENPMWELRICKFCLNICVGESGDRLTRTAKVLEQLG---PVFSKARYMVRSF 57
Query: 60 GIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYD 119
GI+RNEKIA + TV G KA ++LE LKV+EYEL + NFSDTG FGFGIQEHIDLGIKYD
Sbjct: 58 GIKRNEKIAVHCTVPGAKAEEILEKSLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYD 117
Query: 120 PSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVIL 174
S+GIY +DF+VVL +HR++KE+AM+WFQ KY+G+IL
Sbjct: 118 -SSGIYSLDFYVVLACKAFSIADKKHRTGCMGAKHRISKEEAMRWFQQKYDGIIL 171
>UNIPROTKB|F1LVT8 [details] [associations]
symbol:F1LVT8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR002132
Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 GeneTree:ENSGT00390000013411
IPI:IPI00367378 Ensembl:ENSRNOT00000005511 Uniprot:F1LVT8
Length = 169
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 84/165 (50%), Positives = 106/165 (64%)
Query: 10 PMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIAC 69
P+ E+ + KL L+I VGES D LT A KVLE L+ +T VF ARYTVRSFGIRRNE +
Sbjct: 6 PLWELCICKLFLSICVGESRDGLTWAVKVLEHLTERTRVFFIARYTVRSFGIRRNELLFI 65
Query: 70 YVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDF 129
++ KA ++LE GLK+ EYEL + NFS TG FGFGIQ DLG+KYDPS YG++F
Sbjct: 66 SSSMESIKA-EILEKGLKMWEYELQKNNFSVTGNFGFGIQ---DLGLKYDPSIETYGLEF 121
Query: 130 FVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVIL 174
+VVL +HR+ KE+AM+ FQ KY +IL
Sbjct: 122 YVVLFRPDFSIADKKCRTGCIGAKHRINKEEAMRLFQQKYHRIIL 166
>UNIPROTKB|E2R6N0 [details] [associations]
symbol:E2R6N0 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR002132
Pfam:PF00281 PIRSF:PIRSF002161 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 Ensembl:ENSCAFT00000036018
Uniprot:E2R6N0
Length = 167
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 69/105 (65%), Positives = 83/105 (79%)
Query: 9 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQ-LSGQTPVFSKARYTVRSFGIRRNEKI 67
NPM+E+ + +L LNI V E + LT+AAKVLEQ L+GQTPVFSKARYTVRSFGI+RNEKI
Sbjct: 10 NPMQELCIHQLCLNICVQEFRESLTQAAKVLEQQLTGQTPVFSKARYTVRSFGIKRNEKI 69
Query: 68 ACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHI 112
A + V G KA ++L GLKV+EYE+ + NF DTG FG GIQEHI
Sbjct: 70 AIHCIVHGAKAEEIL--GLKVQEYEIRKNNFFDTGNFGLGIQEHI 112
>UNIPROTKB|F6XQS3 [details] [associations]
symbol:F6XQS3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002132 Pfam:PF00281
PIRSF:PIRSF002161 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 GeneTree:ENSGT00390000013411
Ensembl:ENSCAFT00000036018 EMBL:AAEX03009970 Uniprot:F6XQS3
Length = 164
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 70/105 (66%), Positives = 82/105 (78%)
Query: 9 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQ-LSGQTPVFSKARYTVRSFGIRRNEKI 67
NPM+E+ + +L LNI V E + LT+AAKVLEQ L+GQTPVFSKARYTVRSFGI+RNEKI
Sbjct: 10 NPMQELCIHQLCLNICVQEFRESLTQAAKVLEQQLTGQTPVFSKARYTVRSFGIKRNEKI 69
Query: 68 ACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHI 112
A + V G KA ++L GLKV+EYEL NF DTG FG GIQEHI
Sbjct: 70 AIHCIVHGAKAEEIL--GLKVQEYEL---NFFDTGNFGLGIQEHI 109
>UNIPROTKB|F1LZM9 [details] [associations]
symbol:F1LZM9 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR002132
Pfam:PF00673 PIRSF:PIRSF002161 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 IPI:IPI00388941
Ensembl:ENSRNOT00000037860 Uniprot:F1LZM9
Length = 161
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 68/166 (40%), Positives = 93/166 (56%)
Query: 9 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIA 68
N MRE+ + K LNI V E+ KVLEQ +GQ +FSK +Y +SFGI+RNE+I
Sbjct: 8 NTMRELHIYKPCLNICVRET--------KVLEQFNGQIRIFSKEKYITKSFGIKRNERIT 59
Query: 69 CYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMD 128
+ T KA ++LE LK++EYEL + N D+G G GIQEHIDL S G + +D
Sbjct: 60 IHYTAHESKAEKILEKVLKIQEYELQKNNSLDSGNIGCGIQEHIDLD-----SIGTHRLD 114
Query: 129 FFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVIL 174
F +VL +HR++K++ M+WFQ E V L
Sbjct: 115 FNMVLGRPSFTISGKKRRTGCIVAKHRISKDETMRWFQKPREAVFL 160
>UNIPROTKB|F1M7C1 [details] [associations]
symbol:F1M7C1 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR002132
InterPro:IPR020929 Pfam:PF00281 PROSITE:PS00358 GO:GO:0006605
GO:GO:0005730 GO:GO:0006412 GO:GO:0003735 GO:GO:0042273
GO:GO:0006364 GO:GO:0022625 Gene3D:3.30.1440.10 InterPro:IPR022803
PANTHER:PTHR11994 SUPFAM:SSF55282 IPI:IPI00781571
Ensembl:ENSRNOT00000060517 Uniprot:F1M7C1
Length = 123
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 59/79 (74%), Positives = 67/79 (84%)
Query: 9 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIA 68
NPMRE++++KL LNI VGES RL RAAKVLEQL+GQTP+FSKARYTVRSF IRRNEKIA
Sbjct: 5 NPMRELRIRKLCLNICVGES-TRLARAAKVLEQLTGQTPMFSKARYTVRSFDIRRNEKIA 63
Query: 69 CYVTVRGDKAMQLLESGLK 87
TVRG KA ++LE GLK
Sbjct: 64 VRCTVRGAKAEEILERGLK 82
>UNIPROTKB|P62399 [details] [associations]
symbol:rplE "50S ribosomal subunit protein L5"
species:83333 "Escherichia coli K-12" [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000049
"tRNA binding" evidence=IEA] InterPro:IPR002132 InterPro:IPR020929
InterPro:IPR020930 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 EMBL:X01563 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0006412
EMBL:U18997 GO:GO:0005840 GO:GO:0003735 GO:GO:0000049 GO:GO:0019843
PDB:2VHM PDBsum:2VHM PDB:2RDO PDBsum:2RDO eggNOG:COG0094
HOGENOM:HOG000231311 KO:K02931 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282 PDB:3J0T
PDB:3J0W PDB:3J0Y PDB:3J11 PDB:3J12 PDB:3J14 PDB:3SGF PDB:3UOS
PDBsum:3J0T PDBsum:3J0W PDBsum:3J0Y PDBsum:3J11 PDBsum:3J12
PDBsum:3J14 PDBsum:3SGF PDBsum:3UOS PDB:1P85 PDB:1P86 PDB:1VS6
PDB:1VS8 PDB:1VT2 PDB:2AW4 PDB:2AWB PDB:2GYA PDB:2GYC PDB:2I2T
PDB:2I2V PDB:2J28 PDB:2QAM PDB:2QAO PDB:2QBA PDB:2QBC PDB:2QBE
PDB:2QBG PDB:2QBI PDB:2QBK PDB:2QOV PDB:2QOX PDB:2QOZ PDB:2QP1
PDB:2VHN PDB:2WWQ PDB:2Z4L PDB:2Z4N PDB:3DF2 PDB:3DF4 PDB:3E1B
PDB:3E1D PDB:3FIK PDB:3I1N PDB:3I1P PDB:3I1R PDB:3I1T PDB:3I20
PDB:3I22 PDB:3IZT PDB:3IZU PDB:3J01 PDB:3J19 PDB:3KCR PDB:3OAS
PDB:3OAT PDB:3OFC PDB:3OFD PDB:3OFQ PDB:3OFR PDB:3OFZ PDB:3OG0
PDB:3ORB PDB:3R8S PDB:3R8T PDB:4GAR PDB:4GAU PDBsum:1P85
PDBsum:1P86 PDBsum:1VS6 PDBsum:1VS8 PDBsum:1VT2 PDBsum:2AW4
PDBsum:2AWB PDBsum:2GYA PDBsum:2GYC PDBsum:2I2T PDBsum:2I2V
PDBsum:2J28 PDBsum:2QAM PDBsum:2QAO PDBsum:2QBA PDBsum:2QBC
PDBsum:2QBE PDBsum:2QBG PDBsum:2QBI PDBsum:2QBK PDBsum:2QOV
PDBsum:2QOX PDBsum:2QOZ PDBsum:2QP1 PDBsum:2VHN PDBsum:2WWQ
PDBsum:2Z4L PDBsum:2Z4N PDBsum:3DF2 PDBsum:3DF4 PDBsum:3E1B
PDBsum:3E1D PDBsum:3FIK PDBsum:3I1N PDBsum:3I1P PDBsum:3I1R
PDBsum:3I1T PDBsum:3I20 PDBsum:3I22 PDBsum:3IZT PDBsum:3IZU
PDBsum:3J01 PDBsum:3J19 PDBsum:3KCR PDBsum:3OAS PDBsum:3OAT
PDBsum:3OFC PDBsum:3OFD PDBsum:3OFQ PDBsum:3OFR PDBsum:3OFZ
PDBsum:3OG0 PDBsum:3ORB PDBsum:3R8S PDBsum:3R8T PDBsum:4GAR
PDBsum:4GAU PDB:3BBX PDBsum:3BBX EMBL:M10195 ProtClustDB:PRK00010
HAMAP:MF_01333_B OMA:EQVMFHE PIR:G65123 RefSeq:NP_417767.1
RefSeq:YP_492124.1 ProteinModelPortal:P62399 SMR:P62399
DIP:DIP-35914N IntAct:P62399 MINT:MINT-1238892 PaxDb:P62399
PRIDE:P62399 EnsemblBacteria:EBESCT00000000324
EnsemblBacteria:EBESCT00000015050 GeneID:12934390 GeneID:947800
KEGG:ecj:Y75_p3868 KEGG:eco:b3308 PATRIC:32122048 EchoBASE:EB0861
EcoGene:EG10868 BioCyc:EcoCyc:EG10868-MONOMER
BioCyc:ECOL316407:JW3270-MONOMER EvolutionaryTrace:P62399
Genevestigator:P62399 Uniprot:P62399
Length = 179
Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 42/131 (32%), Positives = 72/131 (54%)
Query: 11 MREIKVQKLVLNISVGES-GDR--LTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKI 67
M+ +V+K+ LN+ VGE+ D+ L AA L +SGQ P+ +KAR +V F IR+ I
Sbjct: 26 MQVPRVEKITLNMGVGEAIADKKLLDNAAADLAAISGQKPLITKARKSVAGFKIRQGYPI 85
Query: 68 ACYVTVRGDKAMQLLESGL-----KVKEYE-LLRRNFSDTGCFGFGIQEHIDLG-IKYDP 120
C VT+RG++ + E + +++++ L ++F G + G++E I I YD
Sbjct: 86 GCKVTLRGERMWEFFERLITIAVPRIRDFRGLSAKSFDGRGNYSMGVREQIIFPEIDYDK 145
Query: 121 STGIYGMDFFV 131
+ G+D +
Sbjct: 146 VDRVRGLDITI 156
>UNIPROTKB|Q9KNZ6 [details] [associations]
symbol:rplE "50S ribosomal protein L5" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR002132 InterPro:IPR020929
InterPro:IPR020930 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005840 GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 eggNOG:COG0094 KO:K02931 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282
ProtClustDB:PRK00010 HAMAP:MF_01333_B OMA:EQVMFHE PIR:B82058
RefSeq:NP_232212.1 ProteinModelPortal:Q9KNZ6 SMR:Q9KNZ6
PRIDE:Q9KNZ6 DNASU:2615601 GeneID:2615601 KEGG:vch:VC2584
PATRIC:20084194 Uniprot:Q9KNZ6
Length = 179
Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 41/131 (31%), Positives = 71/131 (54%)
Query: 11 MREIKVQKLVLNISVGES-GDR--LTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKI 67
M+ +++K+ LN+ VGE+ D+ L AA + +SGQ P+ +KAR +V F IR I
Sbjct: 26 MQVPRIEKITLNMGVGEAINDKKLLENAASDMAIISGQKPLITKARKSVAGFKIREGYPI 85
Query: 68 ACYVTVRGDKAMQLLESGL-----KVKEYELLR-RNFSDTGCFGFGIQEHIDLG-IKYDP 120
C VT+RG++ LE + +V+++ + ++F G + G++E I I YD
Sbjct: 86 GCKVTLRGERMWDFLERLISIALPRVRDFRGVNGKSFDGRGNYSMGVREQIIFPEIDYDK 145
Query: 121 STGIYGMDFFV 131
+ G+D +
Sbjct: 146 VDRVRGLDITI 156
>TIGR_CMR|VC_2584 [details] [associations]
symbol:VC_2584 "ribosomal protein L5" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR002132 InterPro:IPR020929 InterPro:IPR020930
Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161 PROSITE:PS00358
GO:GO:0006412 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005840
GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 eggNOG:COG0094 KO:K02931
Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 ProtClustDB:PRK00010 HAMAP:MF_01333_B OMA:EQVMFHE
PIR:B82058 RefSeq:NP_232212.1 ProteinModelPortal:Q9KNZ6 SMR:Q9KNZ6
PRIDE:Q9KNZ6 DNASU:2615601 GeneID:2615601 KEGG:vch:VC2584
PATRIC:20084194 Uniprot:Q9KNZ6
Length = 179
Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 41/131 (31%), Positives = 71/131 (54%)
Query: 11 MREIKVQKLVLNISVGES-GDR--LTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKI 67
M+ +++K+ LN+ VGE+ D+ L AA + +SGQ P+ +KAR +V F IR I
Sbjct: 26 MQVPRIEKITLNMGVGEAINDKKLLENAASDMAIISGQKPLITKARKSVAGFKIREGYPI 85
Query: 68 ACYVTVRGDKAMQLLESGL-----KVKEYELLR-RNFSDTGCFGFGIQEHIDLG-IKYDP 120
C VT+RG++ LE + +V+++ + ++F G + G++E I I YD
Sbjct: 86 GCKVTLRGERMWDFLERLISIALPRVRDFRGVNGKSFDGRGNYSMGVREQIIFPEIDYDK 145
Query: 121 STGIYGMDFFV 131
+ G+D +
Sbjct: 146 VDRVRGLDITI 156
>TIGR_CMR|SO_0243 [details] [associations]
symbol:SO_0243 "ribosomal protein L5" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR002132 InterPro:IPR020929 InterPro:IPR020930
Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161 PROSITE:PS00358
GO:GO:0006412 GO:GO:0005840 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 eggNOG:COG0094
HOGENOM:HOG000231311 KO:K02931 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282
ProtClustDB:PRK00010 HAMAP:MF_01333_B OMA:EQVMFHE
RefSeq:NP_715883.1 ProteinModelPortal:Q8EK57 SMR:Q8EK57
GeneID:1168126 KEGG:son:SO_0243 PATRIC:23520179 Uniprot:Q8EK57
Length = 179
Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 40/131 (30%), Positives = 70/131 (53%)
Query: 11 MREIKVQKLVLNISVGES-GDR--LTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKI 67
M+ +++K+ LN+ VGE+ D+ + A + + ++GQ PV + AR +V F IR I
Sbjct: 26 MQVPRIEKITLNMGVGEAVADKKVMEHAVRDMTAIAGQKPVVTVARKSVAGFKIREGYPI 85
Query: 68 ACYVTVRGDKAMQLLESGL-----KVKEYE-LLRRNFSDTGCFGFGIQEHIDLG-IKYDP 120
C VT+RG++ + LE + +++++ L + F G + G++E I I YD
Sbjct: 86 GCKVTLRGERMWEFLERLVDIAIPRIRDFRGLSAKAFDGRGNYAMGVREQIIFPEIDYDK 145
Query: 121 STGIYGMDFFV 131
I GMD +
Sbjct: 146 IDKIRGMDIVI 156
>TIGR_CMR|ECH_0421 [details] [associations]
symbol:ECH_0421 "ribosomal protein L5" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0042255 "ribosome
assembly" evidence=ISS] InterPro:IPR002132 InterPro:IPR020929
InterPro:IPR020930 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 EMBL:CP000236 GenomeReviews:CP000236_GR
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 eggNOG:COG0094 HOGENOM:HOG000231311 KO:K02931
Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 ProtClustDB:PRK00010 HAMAP:MF_01333_B OMA:EQVMFHE
RefSeq:YP_507239.1 ProteinModelPortal:Q2GH44 SMR:Q2GH44
STRING:Q2GH44 GeneID:3927027 KEGG:ech:ECH_0421 PATRIC:20576319
BioCyc:ECHA205920:GJNR-422-MONOMER Uniprot:Q2GH44
Length = 177
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 45/135 (33%), Positives = 68/135 (50%)
Query: 8 SNPMREIKVQKLVLNISVGESGDR---LTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRN 64
SN M+ K+ K+ LNI +G G + + L ++GQ PV + A+ ++ F IR+
Sbjct: 21 SNVMQVPKIVKVCLNIGLGIRGSDSKVMNSCVRDLALIAGQKPVATYAKKSIAGFKIRKG 80
Query: 65 EKIACYVTVRGDKAMQLLESGLKV---KEYELLRRNFSD-TGC--FGFGIQEHID-LGIK 117
I C VT+R +K + LE + V +E + + S GC GI+EHI L I
Sbjct: 81 FPIGCKVTLRNNKMYEFLERLIHVVLPREQDFKGLSVSQFDGCGNLSIGIKEHISFLEID 140
Query: 118 YDPSTGIYGMDFFVV 132
YD I G+D +V
Sbjct: 141 YDKIDKILGVDINIV 155
>TIGR_CMR|BA_0122 [details] [associations]
symbol:BA_0122 "ribosomal protein L5" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR002132 InterPro:IPR020929 InterPro:IPR020930
Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161 PROSITE:PS00358
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0000049 GO:GO:0019843
eggNOG:COG0094 HOGENOM:HOG000231311 KO:K02931 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282
ProtClustDB:PRK00010 HAMAP:MF_01333_B RefSeq:NP_842690.1
RefSeq:YP_016727.1 RefSeq:YP_026408.1 ProteinModelPortal:Q81VR8
SMR:Q81VR8 DNASU:1087325 EnsemblBacteria:EBBACT00000009117
EnsemblBacteria:EBBACT00000013603 EnsemblBacteria:EBBACT00000022282
GeneID:1087325 GeneID:2818210 GeneID:2848391 KEGG:ban:BA_0122
KEGG:bar:GBAA_0122 KEGG:bat:BAS0122 OMA:EQVMFHE
BioCyc:BANT260799:GJAJ-133-MONOMER
BioCyc:BANT261594:GJ7F-135-MONOMER Uniprot:Q81VR8
Length = 179
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 37/132 (28%), Positives = 73/132 (55%)
Query: 11 MREIKVQKLVLNISVGES---GDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKI 67
M+ K++K+V+N VG++ L A + L Q++GQ PV ++A+ ++ F +R I
Sbjct: 26 MQVPKIEKIVINTGVGDAVSNSKTLDNAVEELTQITGQKPVVTRAKKSIAGFRLREGMPI 85
Query: 68 ACYVTVRGDKAMQ----LLESGL-KVKEYE-LLRRNFSDTGCFGFGIQEHIDLG-IKYDP 120
VT+RG++ + L+ L +V+++ + +++F G + G++E + I YD
Sbjct: 86 GAKVTLRGEQMYEFFDKLVSVSLPRVRDFRGVSKKSFDGRGNYTLGVKEQLIFPEIDYDK 145
Query: 121 STGIYGMDFFVV 132
+ + GMD +V
Sbjct: 146 VSKVRGMDIVIV 157
>TIGR_CMR|CPS_0613 [details] [associations]
symbol:CPS_0613 "ribosomal protein L5" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR002132 InterPro:IPR020929
InterPro:IPR020930 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 GO:GO:0006412 GO:GO:0005840 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0003735 GO:GO:0000049 GO:GO:0019843
eggNOG:COG0094 HOGENOM:HOG000231311 KO:K02931 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282
ProtClustDB:PRK00010 HAMAP:MF_01333_B OMA:EQVMFHE
RefSeq:YP_267363.1 ProteinModelPortal:Q489A1 SMR:Q489A1
STRING:Q489A1 PRIDE:Q489A1 GeneID:3521213 KEGG:cps:CPS_0613
PATRIC:21464553 BioCyc:CPSY167879:GI48-700-MONOMER Uniprot:Q489A1
Length = 181
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 40/131 (30%), Positives = 70/131 (53%)
Query: 11 MREIKVQKLVLNISVGES-GDR--LTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKI 67
M+ +++K+ LN+ VGE+ D+ L A L +SGQ P+ + AR +V F IR I
Sbjct: 26 MQVPRIEKITLNMGVGEAISDKKVLEHATNDLTAISGQKPITTVARKSVAGFKIREGYPI 85
Query: 68 ACYVTVRGDKAMQLLESGL-----KVKEYELLR-RNFSDTGCFGFGIQEHIDLG-IKYDP 120
VT+RG++ + LE + +++++ L ++F G + G++E I I+YD
Sbjct: 86 GTKVTLRGERMWEFLERLISISIPRIRDFRGLNPKSFDGRGNYSMGVREQIIFPEIEYDK 145
Query: 121 STGIYGMDFFV 131
I G+D +
Sbjct: 146 IDKIRGLDITI 156
>TIGR_CMR|APH_0292 [details] [associations]
symbol:APH_0292 "ribosomal protein L5" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0042255 "ribosome assembly"
evidence=ISS] InterPro:IPR002132 InterPro:IPR020930 Pfam:PF00281
Pfam:PF00673 PIRSF:PIRSF002161 PROSITE:PS00358 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0000049 GO:GO:0019843 eggNOG:COG0094 HOGENOM:HOG000231311
KO:K02931 Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 RefSeq:YP_504904.1 ProteinModelPortal:Q2GL47
SMR:Q2GL47 STRING:Q2GL47 GeneID:3929987 KEGG:aph:APH_0292
PATRIC:20949158 OMA:DSKVMDS ProtClustDB:PRK00010
BioCyc:APHA212042:GHPM-322-MONOMER HAMAP:MF_01333_B Uniprot:Q2GL47
Length = 177
Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 41/134 (30%), Positives = 69/134 (51%)
Query: 9 NPMREIKVQKLVLNISVGESG-DR--LTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNE 65
N M+ +V K+ LN+ +G S D + + L +S Q PV ++AR ++ F IR+
Sbjct: 22 NVMQVPRVVKVCLNMGIGISAADSKVMDSCTRDLAMISAQKPVVTRARKSIAGFKIRKGF 81
Query: 66 KIACYVTVRGDKAMQLLESGLKV-----KEYELLRRNFSDT-GCFGFGIQEHID-LGIKY 118
I C VT+RG + + L+ + + +++ L + D G FGI+EHI L + Y
Sbjct: 82 PIGCMVTLRGKRMYEFLDRLINIALPRERDFRGLSTSQLDGHGNISFGIKEHISFLEVDY 141
Query: 119 DPSTGIYGMDFFVV 132
D + G+D +V
Sbjct: 142 DKIDKVRGLDVVIV 155
>TIGR_CMR|GSU_2845 [details] [associations]
symbol:GSU_2845 "ribosomal protein L5" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR002132 InterPro:IPR020929
InterPro:IPR020930 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 GO:GO:0006412 GO:GO:0005840 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0003735 GO:GO:0000049 GO:GO:0019843
eggNOG:COG0094 HOGENOM:HOG000231311 KO:K02931 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282
ProtClustDB:PRK00010 HAMAP:MF_01333_B OMA:EQVMFHE
RefSeq:NP_953888.1 ProteinModelPortal:Q748Z9 SMR:Q748Z9
GeneID:2686813 KEGG:gsu:GSU2845 PATRIC:22028537
BioCyc:GSUL243231:GH27-2811-MONOMER Uniprot:Q748Z9
Length = 179
Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 38/142 (26%), Positives = 75/142 (52%)
Query: 1 MASDKKLSNPMREIKVQKLVLNISVGESGDR---LTRAAKVLEQLSGQTPVFSKARYTVR 57
+ D SN M+ K++K+V+N+ +GE+ L A + L ++GQ V +KA+ ++
Sbjct: 16 LTKDFGYSNVMQVPKIEKIVVNMGLGEAIQNVKILDSAVEELAAIAGQKAVITKAKKSIA 75
Query: 58 SFGIRRNEKIACYVTVRGDKAMQLLESGL-----KVKEYE-LLRRNFSDTGCFGFGIQEH 111
F +R+ I C VT+R +K + L+ + +V++++ + + F G + G++E
Sbjct: 76 GFKLRQGMPIGCMVTLRREKMYEFLDRLINVALPRVRDFKGVSAKGFDGRGNYSLGVKEQ 135
Query: 112 IDLG-IKYDPSTGIYGMDFFVV 132
+ I YD I G++ +V
Sbjct: 136 LIFPEINYDKIDKIKGLNITIV 157
>UNIPROTKB|Q3A9S8 [details] [associations]
symbol:rplE "50S ribosomal protein L5" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR002132 InterPro:IPR020929
InterPro:IPR020930 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0006412 GO:GO:0042254 GO:GO:0005840 GO:GO:0003735
GO:GO:0000049 GO:GO:0019843 eggNOG:COG0094 HOGENOM:HOG000231311
KO:K02931 Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 ProtClustDB:PRK00010 HAMAP:MF_01333_B OMA:EQVMFHE
RefSeq:YP_361106.1 ProteinModelPortal:Q3A9S8 SMR:Q3A9S8
STRING:Q3A9S8 GeneID:3728454 KEGG:chy:CHY_2297 PATRIC:21277665
BioCyc:CHYD246194:GJCN-2296-MONOMER Uniprot:Q3A9S8
Length = 179
Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 38/130 (29%), Positives = 71/130 (54%)
Query: 9 NPMREIKVQKLVLNISVGES--GDRLTRAAKV-LEQLSGQTPVFSKARYTVRSFGIRRNE 65
N M+ K++K+V+NI +GE+ + AA L ++GQ PV +KA+ +V F +R+
Sbjct: 24 NKMQVPKLEKIVINIGLGEALQNPKAVDAAVADLMAITGQRPVLTKAKKSVAGFRVRQGA 83
Query: 66 KIACYVTVRGDKAMQLLESGL-----KVKEYE-LLRRNFSDTGCFGFGIQEHIDLG-IKY 118
I VT+RGD+ + ++ + +V+++ L ++F G + G++E + I Y
Sbjct: 84 TIGVKVTLRGDRMYEFMDKFVNIVLPRVRDFRGLSPKSFDGRGNYSVGLREQLIFPEIDY 143
Query: 119 DPSTGIYGMD 128
D + GM+
Sbjct: 144 DKIDKVRGME 153
>TIGR_CMR|CHY_2297 [details] [associations]
symbol:CHY_2297 "ribosomal protein L5" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR002132 InterPro:IPR020929
InterPro:IPR020930 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0006412 GO:GO:0042254 GO:GO:0005840 GO:GO:0003735
GO:GO:0000049 GO:GO:0019843 eggNOG:COG0094 HOGENOM:HOG000231311
KO:K02931 Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 ProtClustDB:PRK00010 HAMAP:MF_01333_B OMA:EQVMFHE
RefSeq:YP_361106.1 ProteinModelPortal:Q3A9S8 SMR:Q3A9S8
STRING:Q3A9S8 GeneID:3728454 KEGG:chy:CHY_2297 PATRIC:21277665
BioCyc:CHYD246194:GJCN-2296-MONOMER Uniprot:Q3A9S8
Length = 179
Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 38/130 (29%), Positives = 71/130 (54%)
Query: 9 NPMREIKVQKLVLNISVGES--GDRLTRAAKV-LEQLSGQTPVFSKARYTVRSFGIRRNE 65
N M+ K++K+V+NI +GE+ + AA L ++GQ PV +KA+ +V F +R+
Sbjct: 24 NKMQVPKLEKIVINIGLGEALQNPKAVDAAVADLMAITGQRPVLTKAKKSVAGFRVRQGA 83
Query: 66 KIACYVTVRGDKAMQLLESGL-----KVKEYE-LLRRNFSDTGCFGFGIQEHIDLG-IKY 118
I VT+RGD+ + ++ + +V+++ L ++F G + G++E + I Y
Sbjct: 84 TIGVKVTLRGDRMYEFMDKFVNIVLPRVRDFRGLSPKSFDGRGNYSVGLREQLIFPEIDY 143
Query: 119 DPSTGIYGMD 128
D + GM+
Sbjct: 144 DKIDKVRGME 153
>TIGR_CMR|SPO_0497 [details] [associations]
symbol:SPO_0497 "ribosomal protein L5" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0042255 "ribosome assembly"
evidence=ISS] InterPro:IPR002132 InterPro:IPR020929
InterPro:IPR020930 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 eggNOG:COG0094 HOGENOM:HOG000231311 KO:K02931
Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 ProtClustDB:PRK00010 HAMAP:MF_01333_B OMA:EQVMFHE
RefSeq:YP_165759.1 ProteinModelPortal:Q5LW46 SMR:Q5LW46
GeneID:3195440 KEGG:sil:SPO0497 PATRIC:23374255 Uniprot:Q5LW46
Length = 186
Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 35/133 (26%), Positives = 71/133 (53%)
Query: 9 NPMREIKVQKLVLNISVGESGDRLTRAAKV----LEQLSGQTPVFSKARYTVRSFGIRRN 64
N M K++K+VLNI G + ++ AK L +++GQ + + A+ ++ F +R +
Sbjct: 31 NDMMIPKLEKIVLNIGCGAEAVKDSKKAKSAQEDLSKIAGQKAITTTAKKSIAGFRVRED 90
Query: 65 EKIACYVTVRGDKAMQLLESGL-----KVKEYELLRRNFSDTGCFGFGIQEHIDLG-IKY 118
+ VT+RG++ + L+ + +++++ ++ +F G F GI+EHI I +
Sbjct: 91 MPMGAKVTLRGERMYEFLDRLITIAMPRIRDFRGVKPSFDGRGNFAMGIKEHIVFPEIDF 150
Query: 119 DPSTGIYGMDFFV 131
D ++GMD +
Sbjct: 151 DKVDEVWGMDIVI 163
>TIGR_CMR|CBU_0250 [details] [associations]
symbol:CBU_0250 "ribosomal protein L5" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] InterPro:IPR002132 InterPro:IPR020929
InterPro:IPR020930 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 GO:GO:0006412 GO:GO:0005840 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0003735 GO:GO:0000049 GO:GO:0019843
eggNOG:COG0094 HOGENOM:HOG000231311 KO:K02931 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282
ProtClustDB:PRK00010 HAMAP:MF_01333_B OMA:EQVMFHE
RefSeq:NP_819294.1 ProteinModelPortal:Q83ER4 SMR:Q83ER4
PRIDE:Q83ER4 GeneID:1208131 KEGG:cbu:CBU_0250 PATRIC:17929193
BioCyc:CBUR227377:GJ7S-256-MONOMER Uniprot:Q83ER4
Length = 182
Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 38/127 (29%), Positives = 69/127 (54%)
Query: 15 KVQKLVLNISVGES-GDR--LTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYV 71
+++K+ LN+ +GE+ D+ + RA + ++SGQ P+ + AR + F IR I C V
Sbjct: 30 RLEKITLNMGLGEAVADKKVIERAMDDMIKISGQKPLITYARKSEAGFKIRAGWPIGCKV 89
Query: 72 TVRGDKAMQLLESGL-----KVKEYE-LLRRNFSDTGCFGFGIQEHIDLG-IKYDPSTGI 124
T+R D+ + L+ + +++++ L ++F G + GI+E I I+YD I
Sbjct: 90 TLRRDRMYEFLKRLISIAIPRIRDFRGLSPKSFDGRGNYSLGIREQIVFPEIQYDKVDAI 149
Query: 125 YGMDFFV 131
GMD +
Sbjct: 150 RGMDITI 156
>TIGR_CMR|CJE_1863 [details] [associations]
symbol:CJE_1863 "ribosomal protein L5" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR002132 InterPro:IPR020929
InterPro:IPR020930 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 GO:GO:0006412 GO:GO:0005840 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0003735 GO:GO:0000049 GO:GO:0019843
eggNOG:COG0094 HOGENOM:HOG000231311 KO:K02931 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282
ProtClustDB:PRK00010 HAMAP:MF_01333_B OMA:EQVMFHE
RefSeq:YP_179833.1 ProteinModelPortal:Q5HSA2 SMR:Q5HSA2
STRING:Q5HSA2 GeneID:3232490 KEGG:cjr:CJE1863 PATRIC:20045558
BioCyc:CJEJ195099:GJC0-1902-MONOMER Uniprot:Q5HSA2
Length = 181
Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 36/136 (26%), Positives = 69/136 (50%)
Query: 7 LSNPMREIKVQKLVLNISVGE-SGDR--LTRAAKVLEQLSGQTPVFSKARYTVRSFGIRR 63
+ NPM ++K+V+++ GE + D+ L A + ++GQ V +KA+ +V F +R
Sbjct: 22 IKNPMLIPVIEKVVISVGAGELAKDQKVLQNVADTISLIAGQKAVITKAKKSVAGFKVRE 81
Query: 64 NEKIACYVTVRGDKAMQLLESGL-----KVKEYELLRRN-FSDTGCFGFGIQEHIDLG-I 116
+ VT+R + L+ + +VK++ L R+ F G + FG+ E + +
Sbjct: 82 GFPVGVMVTLRKENMYAFLDKLISIALPRVKDFRGLSRDGFDGRGNYNFGLDEQLMFPEV 141
Query: 117 KYDPSTGIYGMDFFVV 132
+YD +GM+ +V
Sbjct: 142 EYDKILRTHGMNISIV 157
>TIGR_CMR|NSE_0278 [details] [associations]
symbol:NSE_0278 "ribosomal protein L5" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0042255 "ribosome
assembly" evidence=ISS] InterPro:IPR002132 InterPro:IPR020929
InterPro:IPR020930 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0000049 GO:GO:0019843 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0094 HOGENOM:HOG000231311 KO:K02931 Gene3D:3.30.1440.10
InterPro:IPR022803 PANTHER:PTHR11994 SUPFAM:SSF55282
ProtClustDB:PRK00010 HAMAP:MF_01333_B OMA:EQVMFHE
RefSeq:YP_506169.1 ProteinModelPortal:Q2GEC7 STRING:Q2GEC7
GeneID:3932054 KEGG:nse:NSE_0278 PATRIC:22680649
BioCyc:NSEN222891:GHFU-305-MONOMER Uniprot:Q2GEC7
Length = 177
Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 40/136 (29%), Positives = 70/136 (51%)
Query: 7 LSNPMREIKVQKLVLNISVG-ESGDR--LTRAAKVLEQLSGQTPVFSKARYTVRSFGIRR 63
+ +P++ + +K+ L++ +G S D L A + L ++GQ V + A+ ++ SF +R+
Sbjct: 20 VDSPVKAPRFEKVCLSVGLGGASSDSKLLASAVEDLSLIAGQKAVVTVAKKSISSFKLRK 79
Query: 64 NEKIACYVTVRG----DKAMQLLESGLK-VKEYE-LLRRNFSDTGCFGFGIQEHIDLG-I 116
+ C VT+R D +LL L K+++ RNF G FG+ EHI +
Sbjct: 80 GFPVGCRVTLRKRRMFDFINRLLYMALPDQKDFKGFTMRNFDGHGNMAFGLTEHIVFPEV 139
Query: 117 KYDPSTGIYGMDFFVV 132
+D + I GM+ VV
Sbjct: 140 DFDKTYRIIGMNVVVV 155
>TAIR|locus:2124978 [details] [associations]
symbol:AT4G01310 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISS] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0022626 "cytosolic ribosome"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] InterPro:IPR002132 InterPro:IPR020929
InterPro:IPR020930 Pfam:PF00281 Pfam:PF00673 PROSITE:PS00358
GO:GO:0009570 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016020
GO:GO:0006412 GO:GO:0009941 GO:GO:0003735 GO:GO:0022626
GO:GO:0019843 EMBL:AL161491 UniGene:At.20244 EMBL:AF007269
EMBL:AY056194 EMBL:AY114008 EMBL:AY086243 IPI:IPI00521413
PIR:T01713 RefSeq:NP_192040.1 ProteinModelPortal:O04603 SMR:O04603
IntAct:O04603 STRING:O04603 PaxDb:O04603 PRIDE:O04603 ProMEX:O04603
EnsemblPlants:AT4G01310.1 GeneID:827947 KEGG:ath:AT4G01310
GeneFarm:66 TAIR:At4g01310 eggNOG:COG0094 HOGENOM:HOG000231311
InParanoid:O04603 KO:K02931 OMA:FGMPFAR PhylomeDB:O04603
ProtClustDB:CLSN2685489 Genevestigator:O04603 GermOnline:AT4G01310
Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 Uniprot:O04603
Length = 262
Score = 124 (48.7 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 33/124 (26%), Positives = 68/124 (54%)
Query: 15 KVQKLVLNISVGESG--DR-LTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYV 71
KVQK+V+N +G++ D+ L A K + ++GQ P+ ++AR ++ +F IR ++ + V
Sbjct: 85 KVQKIVVNCGIGDAAQNDKGLEAAMKDIALITGQKPIKTRARASIATFKIREDQPLGIAV 144
Query: 72 TVRGDKAMQLLESGL-----KVKEYE-LLRRNFSDTGCFGFGIQEH-IDLGIKYDPSTGI 124
T+RGD L+ + + ++++ + +F G + G+++ + I++D
Sbjct: 145 TLRGDVMYSFLDRLINLALPRTRDFQGVSPSSFDGNGNYSIGVKDQGVFPEIRFDAVGKT 204
Query: 125 YGMD 128
GMD
Sbjct: 205 RGMD 208
>UNIPROTKB|P62403 [details] [associations]
symbol:rplE "50S ribosomal protein L5" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR002132
InterPro:IPR020930 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 GO:GO:0005886 GO:GO:0040007 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0006412
GO:GO:0005840 EMBL:BX842574 GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 eggNOG:COG0094 HOGENOM:HOG000231311 KO:K02931
Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 ProtClustDB:PRK00010 HAMAP:MF_01333_B OMA:EQVMFHE
PIR:G70643 RefSeq:NP_215230.1 RefSeq:NP_335161.1
RefSeq:YP_006514060.1 ProteinModelPortal:P62403 SMR:P62403
PhosSite:P12061577 PRIDE:P62403 EnsemblBacteria:EBMYCT00000002122
EnsemblBacteria:EBMYCT00000069791 GeneID:13318605 GeneID:888400
GeneID:926034 KEGG:mtc:MT0742 KEGG:mtu:Rv0716 KEGG:mtv:RVBD_0716
PATRIC:18123365 TubercuList:Rv0716 Uniprot:P62403
Length = 187
Score = 119 (46.9 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 38/134 (28%), Positives = 66/134 (49%)
Query: 9 NPMREIKVQKLVLNISVGESG-DR--LTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNE 65
N M+ V K+V+N+ VGE+ D + A L ++GQ P +AR ++ F +R
Sbjct: 31 NVMQIPTVTKVVVNMGVGEAARDAKLINGAVNDLALITGQKPEVRRARKSIAQFKLREGM 90
Query: 66 KIACYVTVRGDKAMQLLES----GL-KVKEYE-LLRRNFSDTGCFGFGIQEH-IDLGIKY 118
+ VT+RGD+ + L+ L +++++ L + F G + FG+ E + +
Sbjct: 91 PVGVRVTLRGDRMWEFLDRLTSIALPRIRDFRGLSPKQFDGVGNYTFGLAEQAVFHEVDV 150
Query: 119 DPSTGIYGMDFFVV 132
D + GMD VV
Sbjct: 151 DKIDRVRGMDINVV 164
>TIGR_CMR|DET_0486 [details] [associations]
symbol:DET_0486 "ribosomal protein L5" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0015934 "large ribosomal
subunit" evidence=ISS] InterPro:IPR002132 InterPro:IPR020929
InterPro:IPR020930 Pfam:PF00281 Pfam:PF00673 PIRSF:PIRSF002161
PROSITE:PS00358 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0000049 GO:GO:0019843
eggNOG:COG0094 HOGENOM:HOG000231311 KO:K02931 OMA:FGMPFAR
Gene3D:3.30.1440.10 InterPro:IPR022803 PANTHER:PTHR11994
SUPFAM:SSF55282 ProtClustDB:PRK00010 HAMAP:MF_01333_B
RefSeq:YP_181230.1 ProteinModelPortal:Q3Z969 SMR:Q3Z969
STRING:Q3Z969 GeneID:3230243 KEGG:det:DET0486 PATRIC:21608041
BioCyc:DETH243164:GJNF-486-MONOMER Uniprot:Q3Z969
Length = 179
Score = 108 (43.1 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 31/115 (26%), Positives = 58/115 (50%)
Query: 6 KLSNPMREIKVQKLVLNISVGE--SGDRLTRAAKV-LEQLSGQTPVFSKARYTVRSFGIR 62
K N M+ K+ K+V+N VGE S + A+ + ++GQ PV ++A+ +V +F +R
Sbjct: 20 KYENIMQVPKLVKVVINTGVGEAVSNSKALETAEADIVAIAGQHPVITRAKRSVANFKLR 79
Query: 63 RNEKIACYVTVRGDKAMQLLESGL-----KVKEYELLRRN-FSDTGCFGFGIQEH 111
I VT+RG + L +V++++ + F + G + G ++H
Sbjct: 80 AGMPIGLKVTLRGQRMYDFLNKLFFITLPRVRDFQGVSNTAFDEHGNYTLGFKDH 134
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 182 165 0.00093 107 3 11 22 0.37 32
30 0.45 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 55
No. of states in DFA: 585 (62 KB)
Total size of DFA: 136 KB (2085 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 12.76u 0.11s 12.87t Elapsed: 00:00:01
Total cpu time: 12.76u 0.11s 12.87t Elapsed: 00:00:01
Start: Mon May 20 15:55:31 2013 End: Mon May 20 15:55:32 2013