Query 030175
Match_columns 182
No_of_seqs 293 out of 2080
Neff 8.4
Searched_HMMs 13730
Date Mon Mar 25 15:35:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030175.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/030175hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1wf2a_ d.58.7.1 (A:) Heteroge 99.9 2.3E-23 1.7E-27 141.6 10.6 77 5-81 13-89 (98)
2 d2cqia1 d.58.7.1 (A:1-90) Nucl 99.9 1E-22 7.5E-27 136.2 10.4 81 1-82 2-88 (90)
3 d1whwa_ d.58.7.1 (A:) Probable 99.9 4.9E-22 3.5E-26 135.1 11.9 79 2-81 3-89 (99)
4 d1x5ua1 d.58.7.1 (A:7-99) Spli 99.9 4.1E-22 3E-26 134.0 10.3 79 2-81 4-90 (93)
5 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 99.9 5.6E-22 4.1E-26 133.4 10.7 76 4-80 4-87 (93)
6 d1b7fa1 d.58.7.1 (A:123-204) S 99.9 4.5E-22 3.2E-26 130.6 9.7 72 7-79 2-81 (82)
7 d1u6fa1 d.58.7.1 (A:1-139) RNA 99.9 1.4E-21 1E-25 140.5 11.5 77 5-82 40-124 (139)
8 d2cq3a1 d.58.7.1 (A:110-202) R 99.9 1.7E-21 1.2E-25 131.0 11.1 78 3-81 7-90 (93)
9 d1fxla1 d.58.7.1 (A:37-118) Hu 99.9 9.4E-22 6.8E-26 129.0 9.4 72 7-79 2-81 (82)
10 d1cvja2 d.58.7.1 (A:91-179) Po 99.9 8E-22 5.8E-26 131.5 9.2 75 6-81 7-87 (89)
11 d2b0ga1 d.58.7.1 (A:1-83) Spli 99.9 1.3E-21 9.1E-26 128.9 10.0 76 2-78 3-82 (83)
12 d1x4aa1 d.58.7.1 (A:9-103) Spl 99.9 1.3E-21 9.4E-26 132.0 10.3 76 4-80 11-91 (95)
13 d2cqba1 d.58.7.1 (A:1-89) Pept 99.9 6.7E-22 4.9E-26 131.9 8.2 75 6-81 4-86 (89)
14 d2cq0a1 d.58.7.1 (A:231-320) E 99.9 1.4E-21 1E-25 130.6 9.5 76 4-80 5-88 (90)
15 d2cpza1 d.58.7.1 (A:383-484) C 99.9 8.6E-22 6.2E-26 134.6 8.5 78 4-82 15-100 (102)
16 d1rk8a_ d.58.7.1 (A:) RNA-bind 99.9 1.6E-21 1.2E-25 129.7 9.6 76 4-80 4-87 (88)
17 d2f9da1 d.58.7.1 (A:12-125) Pr 99.9 1.8E-21 1.3E-25 135.3 10.1 76 3-79 3-83 (114)
18 d2cpda1 d.58.7.1 (A:223-308) A 99.9 2.4E-21 1.8E-25 128.2 10.2 78 4-82 5-84 (86)
19 d1x5sa1 d.58.7.1 (A:8-97) Cold 99.8 1.7E-21 1.2E-25 130.0 9.1 76 6-82 4-87 (90)
20 d2cpha1 d.58.7.1 (A:454-547) P 99.8 2.6E-21 1.9E-25 130.3 10.0 78 3-81 4-91 (94)
21 d2bz2a1 d.58.7.1 (A:35-113) Ne 99.8 2E-21 1.4E-25 126.8 8.7 75 4-81 2-78 (79)
22 d1x4ga1 d.58.7.1 (A:8-103) Nuc 99.8 2.1E-21 1.5E-25 131.3 8.9 77 4-81 15-93 (96)
23 d2cqca1 d.58.7.1 (A:109-191) A 99.8 1.9E-21 1.4E-25 127.9 8.0 72 2-74 4-83 (83)
24 d2adca1 d.58.7.1 (A:335-443) P 99.8 3.6E-21 2.6E-25 132.6 9.7 75 7-81 2-79 (109)
25 d3begb1 d.58.7.1 (B:121-207) S 99.8 6.1E-22 4.4E-26 131.6 5.5 73 8-81 1-74 (87)
26 d1wg1a_ d.58.7.1 (A:) Probable 99.8 4.8E-21 3.5E-25 127.4 9.8 76 5-81 3-79 (88)
27 d1whxa_ d.58.7.1 (A:) Probable 99.8 2.6E-21 1.9E-25 133.7 8.7 75 6-81 9-85 (111)
28 d2ghpa1 d.58.7.1 (A:116-196) U 99.8 2.4E-21 1.7E-25 126.8 8.0 72 7-79 1-80 (81)
29 d2cpfa1 d.58.7.1 (A:362-446) P 99.8 3.7E-21 2.7E-25 127.0 8.8 70 10-80 1-81 (85)
30 d1cvja1 d.58.7.1 (A:11-90) Pol 99.8 4.6E-21 3.3E-25 125.3 8.8 69 9-78 2-78 (80)
31 d1no8a_ d.58.7.1 (A:) Nuclear 99.8 4.5E-21 3.3E-25 124.8 8.6 69 9-78 2-77 (78)
32 d1wg4a_ d.58.7.1 (A:) Splicing 99.8 5.1E-21 3.7E-25 129.8 9.2 76 6-82 14-90 (98)
33 d2u2fa_ d.58.7.1 (A:) Splicing 99.8 4.5E-21 3.3E-25 126.8 8.6 73 8-81 2-82 (85)
34 d1fjca_ d.58.7.1 (A:) Nucleoli 99.8 3.4E-21 2.5E-25 130.1 7.9 78 4-82 13-93 (96)
35 d2adca2 d.58.7.1 (A:444-531) P 99.8 7.1E-21 5.2E-25 126.5 9.3 75 4-79 7-86 (88)
36 d2cpja1 d.58.7.1 (A:65-150) No 99.8 6.2E-21 4.5E-25 126.4 8.8 75 6-81 7-83 (86)
37 d1b7fa2 d.58.7.1 (A:205-289) S 99.8 8.8E-21 6.4E-25 125.3 9.5 73 4-77 3-85 (85)
38 d2cqda1 d.58.7.1 (A:1-103) RNA 99.8 1.8E-20 1.3E-24 128.1 11.2 76 4-81 7-90 (103)
39 d2cqha1 d.58.7.1 (A:2-81) IGF- 99.8 2.5E-21 1.8E-25 126.6 6.4 74 8-82 2-78 (80)
40 d2cpea1 d.58.7.1 (A:353-453) R 99.8 4.7E-21 3.4E-25 130.3 8.0 79 2-81 3-97 (101)
41 d1x4ha1 d.58.7.1 (A:8-105) RNA 99.8 1.5E-20 1.1E-24 127.0 10.2 79 2-81 3-95 (98)
42 d1fxla2 d.58.7.1 (A:119-203) H 99.8 7.7E-21 5.6E-25 125.6 8.5 71 6-77 5-85 (85)
43 d1whya_ d.58.7.1 (A:) Putative 99.8 1.8E-20 1.3E-24 126.8 10.4 78 3-81 13-94 (97)
44 d1wi8a_ d.58.7.1 (A:) Eukaryot 99.8 2.5E-20 1.8E-24 127.5 10.5 76 4-82 12-96 (104)
45 d1wf0a_ d.58.7.1 (A:) TAR DNA- 99.8 8.4E-21 6.1E-25 126.2 7.7 75 5-82 3-80 (88)
46 d1x5ta1 d.58.7.1 (A:8-90) Spli 99.8 7.7E-21 5.6E-25 124.9 7.3 72 10-82 1-81 (83)
47 d2ghpa3 d.58.7.1 (A:206-291) U 99.8 9.1E-21 6.6E-25 125.5 7.7 73 6-80 3-85 (86)
48 d1nu4a_ d.58.7.1 (A:) Spliceso 99.8 2E-20 1.4E-24 125.1 9.3 75 6-81 2-85 (91)
49 d1x4ba1 d.58.7.1 (A:8-110) Het 99.8 1.9E-20 1.4E-24 128.1 9.2 74 7-82 20-101 (103)
50 d1l3ka1 d.58.7.1 (A:8-91) Nucl 99.8 1.9E-20 1.4E-24 123.5 8.6 74 3-78 2-83 (84)
51 d2cpxa1 d.58.7.1 (A:291-392) R 99.8 4.5E-21 3.3E-25 130.7 5.7 78 4-82 15-100 (102)
52 d2cqga1 d.58.7.1 (A:96-185) TA 99.8 2.6E-20 1.9E-24 124.4 9.3 76 3-81 4-87 (90)
53 d1p1ta_ d.58.7.1 (A:) Cleavage 99.8 1.1E-20 7.8E-25 129.4 7.5 73 7-80 8-88 (104)
54 d2adba1 d.58.7.1 (A:177-284) P 99.8 8.2E-21 6E-25 130.9 6.8 80 1-81 1-86 (108)
55 d2cq1a1 d.58.7.1 (A:51-138) Po 99.8 6.3E-20 4.6E-24 121.8 10.8 79 2-81 3-85 (88)
56 d1wexa_ d.58.7.1 (A:) Heteroge 99.8 1.5E-19 1.1E-23 123.7 12.3 81 3-84 11-95 (104)
57 d1l3ka2 d.58.7.1 (A:103-181) N 99.8 8.4E-20 6.1E-24 118.7 9.2 69 7-77 2-78 (79)
58 d1uawa_ d.58.7.1 (A:) Musashi- 99.8 1.6E-20 1.1E-24 121.9 5.5 68 8-77 1-76 (77)
59 d1wi6a1 d.58.7.1 (A:69-143) Ri 99.8 1.3E-19 9.4E-24 116.9 9.6 69 10-80 1-71 (75)
60 d1hd0a_ d.58.7.1 (A:) Heteroge 99.8 5.4E-20 3.9E-24 118.7 7.7 67 9-77 1-75 (75)
61 d2msta_ d.58.7.1 (A:) Neural R 99.8 4.4E-20 3.2E-24 118.8 7.1 67 9-77 1-75 (75)
62 d1fjeb1 d.58.7.1 (B:1-91) Nucl 99.8 7.2E-21 5.2E-25 127.4 3.4 74 4-79 10-90 (91)
63 d2cq4a1 d.58.7.1 (A:132-232) R 99.8 4.8E-20 3.5E-24 125.6 7.5 71 7-79 18-96 (101)
64 d1x5oa1 d.58.7.1 (A:8-108) RNA 99.8 2.9E-20 2.1E-24 126.6 6.4 74 5-79 16-96 (101)
65 d1x0fa1 d.58.7.1 (A:183-257) N 99.8 6.3E-20 4.6E-24 118.5 5.6 67 9-77 1-75 (75)
66 d1weza_ d.58.7.1 (A:) Heteroge 99.8 3.9E-19 2.8E-23 121.1 9.9 76 3-81 11-93 (102)
67 d1wg5a_ d.58.7.1 (A:) Heteroge 99.8 9.5E-19 6.9E-23 119.6 11.8 78 3-82 11-96 (104)
68 d1zh5a2 d.58.7.1 (A:105-189) L 99.8 3.5E-19 2.6E-23 117.5 9.0 71 6-78 5-82 (85)
69 d2ghpa2 d.58.7.1 (A:41-115) U4 99.8 3.2E-19 2.3E-23 115.0 8.4 68 8-77 1-74 (75)
70 d1x4fa1 d.58.7.1 (A:8-106) Mat 99.8 2.6E-19 1.9E-23 121.5 8.4 77 4-81 15-96 (99)
71 d2disa1 d.58.7.1 (A:8-103) Hyp 99.8 2.8E-19 2E-23 120.5 8.3 75 7-82 1-87 (96)
72 d2cpia1 d.58.7.1 (A:101-189) E 99.8 2.1E-19 1.5E-23 119.6 7.3 70 5-75 6-89 (89)
73 d1x4da1 d.58.7.1 (A:8-96) Matr 99.8 5.9E-19 4.3E-23 117.4 9.2 77 3-80 4-85 (89)
74 d2cqpa1 d.58.7.1 (A:917-1002) 99.8 2E-19 1.5E-23 118.8 6.4 73 4-77 6-86 (86)
75 d1weya_ d.58.7.1 (A:) Calcipre 99.8 1.9E-18 1.4E-22 118.1 8.9 77 5-82 3-86 (104)
76 d1x4ea1 d.58.7.1 (A:8-79) RNA- 99.7 4E-19 2.9E-23 113.5 4.6 63 10-73 1-71 (72)
77 d2cpya1 d.58.7.1 (A:536-638) R 99.7 3E-18 2.2E-22 116.7 7.0 73 5-79 6-86 (103)
78 d1wela1 d.58.7.1 (A:412-523) R 99.7 7.1E-18 5.2E-22 116.6 5.4 74 4-79 15-96 (112)
79 d2cq2a1 d.58.7.1 (A:25-125) Al 99.7 4.7E-17 3.4E-21 110.5 8.1 64 3-67 14-81 (101)
80 d1u2fa_ d.58.7.1 (A:) Splicing 99.7 3.6E-19 2.6E-23 118.6 -3.0 68 8-77 2-82 (90)
81 d1owxa_ d.58.7.1 (A:) Lupus LA 99.7 2.3E-16 1.7E-20 109.1 9.7 74 5-79 8-85 (113)
82 d1u1qa_ d.58.7.1 (A:) Nuclear 99.6 2.7E-16 1.9E-20 116.6 9.3 75 4-80 94-176 (183)
83 d1jmta_ d.58.7.3 (A:) d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=2.3e-23 Score=141.55 Aligned_cols=77 Identities=21% Similarity=0.481 Sum_probs=71.0
Q ss_pred CCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEEeCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEeecCC
Q 030175 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYALKDD 81 (182)
Q Consensus 5 ~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a~~~~ 81 (182)
..+.+|||+||+++.+++++|+++|++||+|+.|.|.+|||||+|++.++|++||+.|||+.|+|+.|+|+|+..+.
T Consensus 13 ~~~~~lfV~nL~~~~~~~~~L~~~F~~~G~i~~~~i~rg~aFV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~~~~ 89 (98)
T d1wf2a_ 13 SMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAAEPK 89 (98)
T ss_dssp SCCCCEEEEEECTTTCCHHHHHHSSTTSSCEEEEEEETEEEEEEESSHHHHHHHHHTTTTCEETTEECEEEETTSCC
T ss_pred CCCcEEEEeCCCcccCCHHHHHHHHhhcCCEEEEEEeCCeEEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCCC
Confidence 44678999999546789999999999999999999999999999999999999999999999999999999997643
No 2
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=1e-22 Score=136.16 Aligned_cols=81 Identities=23% Similarity=0.397 Sum_probs=74.9
Q ss_pred CCCCCCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEE
Q 030175 1 MANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI------RRNFAFVQFETQEEATKALESTDRSKLVDRVISV 74 (182)
Q Consensus 1 s~~~~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V 74 (182)
|++..+.++|||+|| |.++++++|+++|++||+|..|.| .++||||+|.+.++|+.||+.|||..|.|+.|+|
T Consensus 2 m~d~~~~~tl~V~nL-p~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~g~~i~v 80 (90)
T d2cqia1 2 MEDDGQPRTLYVGNL-SRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKV 80 (90)
T ss_dssp CCCSCCCCEEEEESC-CTTCCHHHHHHHHHHHSCEEEEEEECCCCSSCCEEEEEESSHHHHHHHHHHHTTEEETTEEEEE
T ss_pred CCCCCCCCEEEEECC-CCCCCHHHHHHHHHhcCCceeeeeecccCccceeeEEEECCHHHHHHHHHHcCCCEECCEEEEE
Confidence 567788999999999 889999999999999999999988 3689999999999999999999999999999999
Q ss_pred EEeecCCC
Q 030175 75 EYALKDDS 82 (182)
Q Consensus 75 ~~a~~~~~ 82 (182)
.||+++..
T Consensus 81 ~~a~~~~~ 88 (90)
T d2cqia1 81 NWATTPSS 88 (90)
T ss_dssp EECCCTTC
T ss_pred EEcCCCCC
Confidence 99986543
No 3
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.87 E-value=4.9e-22 Score=135.06 Aligned_cols=79 Identities=27% Similarity=0.422 Sum_probs=72.5
Q ss_pred CCCCCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEE
Q 030175 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTDRSKLVDRVIS 73 (182)
Q Consensus 2 ~~~~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~ 73 (182)
+.....++|||+|| |+.+++++|+++|.+||+|..|.| .+|||||+|.+.++|++||+.||+..|.|+.|+
T Consensus 3 ~~~~~~~~lfV~nL-~~~~t~~~l~~~F~~~g~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~~~gr~i~ 81 (99)
T d1whwa_ 3 SGSSGSGRLFVRNL-SYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLH 81 (99)
T ss_dssp CCCCSCEEEEEECC-CTTCCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSSCEEE
T ss_pred CCCCCCCEEEEECC-CCcCCHHHHHHHHHhcCCceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCCEECCEEEE
Confidence 34566778999999 899999999999999999999998 378999999999999999999999999999999
Q ss_pred EEEeecCC
Q 030175 74 VEYALKDD 81 (182)
Q Consensus 74 V~~a~~~~ 81 (182)
|++|..+.
T Consensus 82 V~~a~~~~ 89 (99)
T d1whwa_ 82 VLPSTIKK 89 (99)
T ss_dssp EEECCCCS
T ss_pred EEECCCCC
Confidence 99998764
No 4
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=4.1e-22 Score=134.04 Aligned_cols=79 Identities=23% Similarity=0.345 Sum_probs=72.5
Q ss_pred CCCCCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEE
Q 030175 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTDRSKLVDRVIS 73 (182)
Q Consensus 2 ~~~~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~ 73 (182)
.+.++.++|||+|| |..+++++|+++|++||+|..|.| .+|||||+|.+.++|++||+.|||..|.|+.|+
T Consensus 4 ~~~~~~~tlfV~nL-p~~~t~~~l~~~F~~~G~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~l~ 82 (93)
T d1x5ua1 4 SERNQDATVYVGGL-DEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKPIR 82 (93)
T ss_dssp CCCCTTTEEEEECC-CTTCCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSSCBCE
T ss_pred CcCCCCCEEEEeCC-CCcCCHHHHHHHHHHhCCccccceeecccccccccceEEEECCHHHHHHHHHHcCCCEECCEEEE
Confidence 34566789999999 899999999999999999999988 368999999999999999999999999999999
Q ss_pred EEEeecCC
Q 030175 74 VEYALKDD 81 (182)
Q Consensus 74 V~~a~~~~ 81 (182)
|++|.+..
T Consensus 83 V~~A~~~~ 90 (93)
T d1x5ua1 83 VNKASAHN 90 (93)
T ss_dssp EEETTTTS
T ss_pred EEEcCCCC
Confidence 99998654
No 5
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=5.6e-22 Score=133.35 Aligned_cols=76 Identities=24% Similarity=0.418 Sum_probs=70.5
Q ss_pred CCCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEE
Q 030175 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTDRSKLVDRVISVE 75 (182)
Q Consensus 4 ~~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~ 75 (182)
..++++|||+|| |+++++++|+++|++||+|..|.| .+|||||+|.+.++|+.||+.|||..|+|+.|.|+
T Consensus 4 ~~~s~tlfV~nl-p~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V~ 82 (93)
T d1h2vz_ 4 LKKSCTLYVGNL-SFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTD 82 (93)
T ss_dssp TTTCCEEEEESC-CTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETTEECEEE
T ss_pred cCCCCEEEEeCC-CCCCCHHHHHHHHHHHCCcceeccccccccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEE
Confidence 357889999999 889999999999999999999988 35799999999999999999999999999999999
Q ss_pred EeecC
Q 030175 76 YALKD 80 (182)
Q Consensus 76 ~a~~~ 80 (182)
||...
T Consensus 83 ~a~~~ 87 (93)
T d1h2vz_ 83 WDAGF 87 (93)
T ss_dssp EESCC
T ss_pred EcCCC
Confidence 98654
No 6
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.87 E-value=4.5e-22 Score=130.62 Aligned_cols=72 Identities=22% Similarity=0.433 Sum_probs=68.1
Q ss_pred CCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEee
Q 030175 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYAL 78 (182)
Q Consensus 7 ~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a~ 78 (182)
+++|||+|| |..+++++|+++|++||+|..|.| .+|||||+|.+.++|+.||+.|||..|.|+.|+|+||+
T Consensus 2 ~t~l~V~nL-p~~~t~~~l~~~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~~g~~l~v~~a~ 80 (82)
T d1b7fa1 2 NTNLIVNYL-PQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYAR 80 (82)
T ss_dssp CSEEEEECC-CTTCCHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECC
T ss_pred CCEEEEeCC-CCCCCHHHHHHHHHHhCCcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCCEECCEEEEEEEcC
Confidence 568999999 889999999999999999999988 37899999999999999999999999999999999997
Q ss_pred c
Q 030175 79 K 79 (182)
Q Consensus 79 ~ 79 (182)
+
T Consensus 81 p 81 (82)
T d1b7fa1 81 P 81 (82)
T ss_dssp C
T ss_pred C
Confidence 5
No 7
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.86 E-value=1.4e-21 Score=140.50 Aligned_cols=77 Identities=23% Similarity=0.470 Sum_probs=70.3
Q ss_pred CCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEE
Q 030175 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTDRSKLVDRVISVEY 76 (182)
Q Consensus 5 ~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~ 76 (182)
...++|||+|| |+++++++|+++|++||+|..|.| .+|||||+|.+.++|+.||+.|||.+|.|+.|+|++
T Consensus 40 ~~~~~l~V~nL-p~~~te~~l~~~F~~~G~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~~gr~l~V~~ 118 (139)
T d1u6fa1 40 DVLRNLMVNYI-PTTVDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILNKRLKVAL 118 (139)
T ss_dssp TTTSEEEEESC-STTCCHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSSCEEEEEE
T ss_pred CCCCEEEEeCC-CCCCCHHHHHHHHHhhccccccccccccccccccceeeEEECCHHHHHHHHHHhCCCEECCEEEEEEE
Confidence 34578999999 889999999999999999999987 368999999999999999999999999999999999
Q ss_pred eecCCC
Q 030175 77 ALKDDS 82 (182)
Q Consensus 77 a~~~~~ 82 (182)
|.....
T Consensus 119 a~~~~~ 124 (139)
T d1u6fa1 119 AASGHQ 124 (139)
T ss_dssp SSCCCC
T ss_pred cCCCCC
Confidence 986543
No 8
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=1.7e-21 Score=130.98 Aligned_cols=78 Identities=32% Similarity=0.543 Sum_probs=72.1
Q ss_pred CCCCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEE
Q 030175 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI------RRNFAFVQFETQEEATKALESTDRSKLVDRVISVEY 76 (182)
Q Consensus 3 ~~~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~ 76 (182)
......+|||+|| |+.+++++|+++|++||+|..|.| .+|||||+|.+.++|++||+.||+..|.|+.|.|++
T Consensus 7 ~~~~~~~l~v~nL-p~~~t~~~L~~~F~~~G~v~~v~~~~~~~~~kg~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~ 85 (93)
T d2cq3a1 7 SKSTPKRLHVSNI-PFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNN 85 (93)
T ss_dssp CSCCCCEEEEESC-CTTCCHHHHHHHGGGTSCEEEEEEECCTTTTCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEE
T ss_pred CCCCCCEEEEECC-CCCCCHHHHHHHHhhcceeeeccccccccCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEe
Confidence 4556789999999 899999999999999999999988 378999999999999999999999999999999999
Q ss_pred eecCC
Q 030175 77 ALKDD 81 (182)
Q Consensus 77 a~~~~ 81 (182)
|+++.
T Consensus 86 A~~r~ 90 (93)
T d2cq3a1 86 ATARV 90 (93)
T ss_dssp CCSSC
T ss_pred cCcCC
Confidence 98754
No 9
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=9.4e-22 Score=128.99 Aligned_cols=72 Identities=21% Similarity=0.428 Sum_probs=67.6
Q ss_pred CCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEee
Q 030175 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYAL 78 (182)
Q Consensus 7 ~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a~ 78 (182)
.++|||+|| |..+++++|+++|++||+|..|.| .+|||||+|.+.++|+.|++.|||..|.|+.|.|+||+
T Consensus 2 ~t~l~V~nL-p~~~te~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~g~~l~v~~Ak 80 (82)
T d1fxla1 2 KTNLIVNYL-PQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYAR 80 (82)
T ss_dssp CSEEEEESC-CTTCCHHHHHHHHHTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECC
T ss_pred CCEEEEECC-CCCCCHHHHHHHHHHhCCcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEee
Confidence 357999999 899999999999999999999988 36799999999999999999999999999999999997
Q ss_pred c
Q 030175 79 K 79 (182)
Q Consensus 79 ~ 79 (182)
|
T Consensus 81 P 81 (82)
T d1fxla1 81 P 81 (82)
T ss_dssp C
T ss_pred C
Confidence 5
No 10
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=8e-22 Score=131.48 Aligned_cols=75 Identities=27% Similarity=0.475 Sum_probs=69.7
Q ss_pred CCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEeec
Q 030175 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI------RRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYALK 79 (182)
Q Consensus 6 ~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a~~ 79 (182)
...+|||+|| |+.+++++|+++|++||.|..|.| .+|||||+|.+.++|++||+.|||..|.|+.|.|++|++
T Consensus 7 ~~~~l~V~nL-p~~~t~~~l~~~F~~~G~v~~~~i~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~V~~a~~ 85 (89)
T d1cvja2 7 GVGNIFIKNL-DKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKS 85 (89)
T ss_dssp TTTEEEEESC-CSSCCHHHHHHHHHTTSCEEEEEECCBTTBCCSCEEEEESCHHHHHHHTTSSSEEEETTEEEEEEECCC
T ss_pred CCCEEEEeCC-CCCCCHHHHHHHHHhcCCceEEEEEeecCCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCC
Confidence 3568999999 889999999999999999999988 378999999999999999999999999999999999986
Q ss_pred CC
Q 030175 80 DD 81 (182)
Q Consensus 80 ~~ 81 (182)
+.
T Consensus 86 ~~ 87 (89)
T d1cvja2 86 RK 87 (89)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 11
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.86 E-value=1.3e-21 Score=128.88 Aligned_cols=76 Identities=28% Similarity=0.484 Sum_probs=70.2
Q ss_pred CCCCCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE---eCCEEEEEeCCHHHHHHHHHhcCCCccC-CcEEEEEEe
Q 030175 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI---RRNFAFVQFETQEEATKALESTDRSKLV-DRVISVEYA 77 (182)
Q Consensus 2 ~~~~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i---~~g~afV~f~~~~~a~~Ai~~l~g~~~~-g~~l~V~~a 77 (182)
.+.+|+++|||+|| |..+++++|.++|++||+|..|.| .+|||||+|.+.++|+.|++.|||..|. |+.|+|.||
T Consensus 3 ~~~pP~~tl~V~nL-p~~~t~~~l~~~f~~~G~i~~v~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~~~~~i~v~~a 81 (83)
T d2b0ga1 3 TEQPPNQILFLTNL-PEETNEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFTTELQSNAAKEALQGFKITPTHAMKITFA 81 (83)
T ss_dssp CCCSCCSEEEEESC-CTTCCHHHHHHHHTTSTTEEEEEECTTTCSCEEEEESSHHHHHHHHHHHTTCBSSTTCBCEEEEC
T ss_pred CCCCCCCEEEEECC-CCCCCHHHHHhhhccCccEEEeeeecccceeEEEecCCHHHHHHHHHHhCCcEeCCCcEEEEEEe
Confidence 35678999999999 889999999999999999999988 4689999999999999999999999884 689999999
Q ss_pred e
Q 030175 78 L 78 (182)
Q Consensus 78 ~ 78 (182)
+
T Consensus 82 k 82 (83)
T d2b0ga1 82 K 82 (83)
T ss_dssp C
T ss_pred c
Confidence 6
No 12
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=1.3e-21 Score=131.98 Aligned_cols=76 Identities=26% Similarity=0.427 Sum_probs=70.4
Q ss_pred CCCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE-----eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEee
Q 030175 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI-----RRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYAL 78 (182)
Q Consensus 4 ~~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i-----~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a~ 78 (182)
..++++|||+|| |..+++++|+++|.+||.|..+.+ .++||||+|.+.++|++||+.||+++|.|+.|+|+||+
T Consensus 11 ~~~~~~l~V~nL-p~~~t~~~l~~~F~~~G~v~~~~~~~~~~~~g~afV~f~~~e~a~~Ai~~l~g~~~~g~~l~V~~a~ 89 (95)
T d1x4aa1 11 GNNDCRIYVGNL-PPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPR 89 (95)
T ss_dssp CCCSSEEEEESC-CTTCCHHHHHHHHGGGSCEEEEEECCSSSSSCCEEEEESCHHHHHHHHHHHTTCEETTEECEEECCC
T ss_pred CCCCCEEEEECC-CCCCCHHHHHHHHhcCCceEEEEecccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEecc
Confidence 356779999999 889999999999999999999988 37899999999999999999999999999999999997
Q ss_pred cC
Q 030175 79 KD 80 (182)
Q Consensus 79 ~~ 80 (182)
..
T Consensus 90 ~~ 91 (95)
T d1x4aa1 90 SG 91 (95)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 13
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=6.7e-22 Score=131.85 Aligned_cols=75 Identities=29% Similarity=0.556 Sum_probs=70.0
Q ss_pred CCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEe
Q 030175 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77 (182)
Q Consensus 6 ~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a 77 (182)
..++|||+|| |+.+++++|+++|++||+|..|.| .+|||||+|.+.++|++||+.|||..|.|+.|.|++|
T Consensus 4 ~~~tlfV~nL-p~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i~g~~l~v~~a 82 (89)
T d2cqba1 4 TKRVLYVGGL-AEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLA 82 (89)
T ss_dssp CCSCEEEESC-CSSCCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEETTEEEEEEEC
T ss_pred CCcEEEEeCC-CCcCCHHHHHHHHhhCCeEEecccccccccccccceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEe
Confidence 4579999999 899999999999999999999988 3789999999999999999999999999999999999
Q ss_pred ecCC
Q 030175 78 LKDD 81 (182)
Q Consensus 78 ~~~~ 81 (182)
+++.
T Consensus 83 ~p~~ 86 (89)
T d2cqba1 83 KPMR 86 (89)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 8654
No 14
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=1.4e-21 Score=130.57 Aligned_cols=76 Identities=26% Similarity=0.511 Sum_probs=70.5
Q ss_pred CCCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEE
Q 030175 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTDRSKLVDRVISVE 75 (182)
Q Consensus 4 ~~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~ 75 (182)
..+.++|||+|| |..+++++|.++|++||+|..|.| .+|||||+|.+.++|++||+.|||..|.|+.|.|+
T Consensus 5 ~~~~~~i~V~nL-p~~~t~~~l~~~f~~~G~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~v~ 83 (90)
T d2cq0a1 5 ADDNATIRVTNL-SEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVE 83 (90)
T ss_dssp CSSSEEEEEESC-CTTCCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEETTEECEEE
T ss_pred CCCCCEEEEECC-CCCCCHHHHHHHHHHhcccccccccccccccccccceeEEECCHHHHHHHHHHhCCCEECCEEEEEE
Confidence 456789999999 889999999999999999999988 36799999999999999999999999999999999
Q ss_pred EeecC
Q 030175 76 YALKD 80 (182)
Q Consensus 76 ~a~~~ 80 (182)
||+++
T Consensus 84 ~akp~ 88 (90)
T d2cq0a1 84 WAKPS 88 (90)
T ss_dssp ESSCC
T ss_pred eeeCC
Confidence 99865
No 15
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=8.6e-22 Score=134.60 Aligned_cols=78 Identities=21% Similarity=0.456 Sum_probs=71.4
Q ss_pred CCCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEE
Q 030175 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTDRSKLVDRVISVE 75 (182)
Q Consensus 4 ~~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~ 75 (182)
.+++++|||+|| |+.+++++|+++|++||.|..+.| .+|||||+|.+.++|+.||+.|||..|.|+.|.|+
T Consensus 15 ~p~~~~l~V~nL-p~~~te~~l~~~F~~~G~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~~g~~i~V~ 93 (102)
T d2cpza1 15 GPEGANLFIYHL-PQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQ 93 (102)
T ss_dssp CSTTCCEEEESC-CSSCCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETTEECEEE
T ss_pred CCCCCEEEEeCC-CCCCCHHHHHHHHHhhccccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCCEECCEEEEEE
Confidence 456788999999 899999999999999999998877 36799999999999999999999999999999999
Q ss_pred EeecCCC
Q 030175 76 YALKDDS 82 (182)
Q Consensus 76 ~a~~~~~ 82 (182)
||.++..
T Consensus 94 ~a~~k~~ 100 (102)
T d2cpza1 94 LKRSKND 100 (102)
T ss_dssp CCCCSCC
T ss_pred EeCCCCC
Confidence 9987653
No 16
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.85 E-value=1.6e-21 Score=129.75 Aligned_cols=76 Identities=22% Similarity=0.479 Sum_probs=69.8
Q ss_pred CCCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEE
Q 030175 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTDRSKLVDRVISVE 75 (182)
Q Consensus 4 ~~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~ 75 (182)
..++.+|||+|| |..+++++|.++|++||+|..|.| .+|||||+|.+.++|++||+.|||..|.|+.|.|+
T Consensus 4 s~~~~~l~V~nL-~~~~t~~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l~g~~l~V~ 82 (88)
T d1rk8a_ 4 SVEGWILFVTSI-HEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVD 82 (88)
T ss_dssp CC-CEEEEEESC-CTTCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEE
T ss_pred CCCCCEEEEeCC-CCCCCHHHHHHHHHHcCCcccccccccccccccccceeEEECCHHHHHHHHHHcCCCEECCEEEEEE
Confidence 345779999999 889999999999999999999988 36799999999999999999999999999999999
Q ss_pred EeecC
Q 030175 76 YALKD 80 (182)
Q Consensus 76 ~a~~~ 80 (182)
||.++
T Consensus 83 ~a~~k 87 (88)
T d1rk8a_ 83 WCFVK 87 (88)
T ss_dssp ESEEC
T ss_pred EecCC
Confidence 99875
No 17
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=1.8e-21 Score=135.33 Aligned_cols=76 Identities=21% Similarity=0.394 Sum_probs=71.1
Q ss_pred CCCCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEEe-----CCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEe
Q 030175 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR-----RNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77 (182)
Q Consensus 3 ~~~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i~-----~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a 77 (182)
.++.+++|||+|| |..+++++|+++|++||.|..|.|. +|||||+|.+.++|+.||+.|||..|.|+.|.|.++
T Consensus 3 pp~~~r~l~V~nL-p~~~te~~l~~~F~~~G~v~~i~~~~~~~~kG~afV~f~~~~~A~~Ai~~l~g~~~~gr~l~V~~a 81 (114)
T d2f9da1 3 PPEVNRILYIRNL-PYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNACDHLSGFNVCNRYLVVLYY 81 (114)
T ss_dssp CTTCCSEEEEESC-CTTCCHHHHHHHHHTTSCEEEEEEECSTTTTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEEEC
T ss_pred ccCCCCEEEEECC-CCCCCHHHHHHHHhhcCCeEeecccccCCcCCeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEc
Confidence 4567889999999 8999999999999999999999983 789999999999999999999999999999999998
Q ss_pred ec
Q 030175 78 LK 79 (182)
Q Consensus 78 ~~ 79 (182)
..
T Consensus 82 ~~ 83 (114)
T d2f9da1 82 NA 83 (114)
T ss_dssp CH
T ss_pred CC
Confidence 64
No 18
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=2.4e-21 Score=128.23 Aligned_cols=78 Identities=28% Similarity=0.386 Sum_probs=70.3
Q ss_pred CCCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEeecCC
Q 030175 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--RRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYALKDD 81 (182)
Q Consensus 4 ~~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a~~~~ 81 (182)
....++|||+|| |.++++++|+++|++||.|..+.+ .+|||||+|.+.++|+.||+.|||..|.|+.|.|+||+++.
T Consensus 5 ~~~~k~l~V~nL-p~~~te~~l~~~F~~~g~i~~~~~~~~rg~afV~f~~~~~A~~Ai~~l~~~~i~g~~i~V~~akP~~ 83 (86)
T d2cpda1 5 MSSVKILYVRNL-MLSTSEEMIEKEFNNIKPGAVERVKKIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAKPVD 83 (86)
T ss_dssp SSCCCEEEEESC-CTTCCHHHHHHHHHTTSTTCEEEEEECSSEEEEEESSHHHHHHHHHHHSSEEETTEEEEEECCCCCC
T ss_pred ccCCCEEEEcCC-CCCCCHHHHHHhhcccceeeeEEEccccEEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEeccCCC
Confidence 445689999999 899999999999999997766655 79999999999999999999999999999999999998764
Q ss_pred C
Q 030175 82 S 82 (182)
Q Consensus 82 ~ 82 (182)
.
T Consensus 84 ~ 84 (86)
T d2cpda1 84 K 84 (86)
T ss_dssp C
T ss_pred C
Confidence 3
No 19
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=1.7e-21 Score=130.05 Aligned_cols=76 Identities=29% Similarity=0.482 Sum_probs=70.2
Q ss_pred CCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEe
Q 030175 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77 (182)
Q Consensus 6 ~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a 77 (182)
...+|||+|| |+++++++|+++|++||.|..|.+ .+|||||+|.+.++|+.||+.|||..|+|+.|.|++|
T Consensus 4 ~~~kifV~nL-p~~~t~~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~a 82 (90)
T d1x5sa1 4 DEGKLFVGGL-SFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQA 82 (90)
T ss_dssp CCSEEEEESC-CTTCCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTSCCCEEEEE
T ss_pred CCCEEEEECC-CCcCCHHHHHHhhhccccccceeeccccccccccceEEEEECCHHHHHHHHHHcCCCEECCEEEEEEEc
Confidence 4567999999 899999999999999999999877 4789999999999999999999999999999999999
Q ss_pred ecCCC
Q 030175 78 LKDDS 82 (182)
Q Consensus 78 ~~~~~ 82 (182)
.++..
T Consensus 83 ~~~~~ 87 (90)
T d1x5sa1 83 GKSSD 87 (90)
T ss_dssp ECCCC
T ss_pred CCCCC
Confidence 87653
No 20
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.85 E-value=2.6e-21 Score=130.30 Aligned_cols=78 Identities=29% Similarity=0.592 Sum_probs=71.7
Q ss_pred CCCCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE---------eCCEEEEEeCCHHHHHHHHHhc-CCCccCCcEE
Q 030175 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI---------RRNFAFVQFETQEEATKALEST-DRSKLVDRVI 72 (182)
Q Consensus 3 ~~~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i---------~~g~afV~f~~~~~a~~Ai~~l-~g~~~~g~~l 72 (182)
...++.+|||+|| |..+++++|+++|++||.|..|.| .+|||||+|.+.++|++||+.| |+..|+|+.|
T Consensus 4 ~~~~~~~l~V~nL-p~~~~e~~l~~~F~~~G~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~~~Gr~l 82 (94)
T d2cpha1 4 KKQTTSKILVRNI-PFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRL 82 (94)
T ss_dssp CSSCCCCEEEESC-CTTCCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSCBC
T ss_pred CCCCCCEEEEeCC-CCCCCHHHHHHHHHHhCCceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCcEECCEEE
Confidence 4567889999999 899999999999999999999988 2689999999999999999998 8999999999
Q ss_pred EEEEeecCC
Q 030175 73 SVEYALKDD 81 (182)
Q Consensus 73 ~V~~a~~~~ 81 (182)
.|+||+...
T Consensus 83 ~V~~A~~~~ 91 (94)
T d2cpha1 83 VLEWADSEV 91 (94)
T ss_dssp EEEECCCCC
T ss_pred EEEEcCCCC
Confidence 999998654
No 21
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=2e-21 Score=126.77 Aligned_cols=75 Identities=27% Similarity=0.454 Sum_probs=69.7
Q ss_pred CCCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEeecCC
Q 030175 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--RRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYALKDD 81 (182)
Q Consensus 4 ~~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a~~~~ 81 (182)
+..+++|||+|| + +|+++|+++|++||+|..|.| .++||||+|.+.++|+.||+.|||..|+|..|+|+||++++
T Consensus 2 p~~~~ti~V~~~-~--~te~~L~~~F~~~G~I~~v~~~~~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~~~P 78 (79)
T d2bz2a1 2 PRKGNTLYVYGE-D--MTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAELNGTQVESVQLKVNIARKQP 78 (79)
T ss_dssp CCCCCEEEEECS-S--CCHHHHHHHHSTTCCCSCEEEETTTTEEEEECSSHHHHHHHHHHHTTCBCSSCBCEEEECCSSC
T ss_pred CCCCCEEEEECC-C--CCHHHHHHHHhccCccceeeeccCCCEEEEEEcccHHHHHHHHHhCCCEECCEEEEEEEecCCC
Confidence 567899999999 4 899999999999999999998 57999999999999999999999999999999999998653
No 22
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=2.1e-21 Score=131.29 Aligned_cols=77 Identities=18% Similarity=0.464 Sum_probs=71.1
Q ss_pred CCCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEeecCC
Q 030175 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--RRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYALKDD 81 (182)
Q Consensus 4 ~~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a~~~~ 81 (182)
.++.++|||+|| |..+++++|+++|++||+|..|.| .+|||||+|.+.++|+.||..|||..|.|+.|+|.|++..+
T Consensus 15 ~~~~~~l~v~nL-~~~~te~~L~~~F~~fG~i~~v~i~~~kg~afV~f~~~~~A~~Ai~~l~~~~i~g~~l~v~~ak~~p 93 (96)
T d1x4ga1 15 SPKNCTVYCGGI-ASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESP 93 (96)
T ss_dssp CSSCCEEEEECC-SSCCCHHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEECCCCCC
T ss_pred CCCCCEEEEcCC-CCCCCHHHHHHHHHHhCCceEEEEEecceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCCC
Confidence 345679999999 889999999999999999999998 48999999999999999999999999999999999997653
No 23
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=1.9e-21 Score=127.90 Aligned_cols=72 Identities=39% Similarity=0.576 Sum_probs=66.5
Q ss_pred CCCCCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEE
Q 030175 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTDRSKLVDRVIS 73 (182)
Q Consensus 2 ~~~~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~ 73 (182)
.++.++++|||+|| |..+++++|+++|++||.|..|.| .+|||||+|.+.++|++||+.|||..|.|+.|+
T Consensus 4 ~~p~~~~~l~V~nL-~~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~ 82 (83)
T d2cqca1 4 ANPDPNCCLGVFGL-SLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIR 82 (83)
T ss_dssp CSCCGGGCEEEESC-CSSCCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEE
T ss_pred CCCCCCCEEEEeCC-CCCCCHHHHHHHHHHhCCCccccccccccccccccceEEEECCHHHHHHHHHHcCCCEECCEEeE
Confidence 35567889999999 899999999999999999999987 267999999999999999999999999999998
Q ss_pred E
Q 030175 74 V 74 (182)
Q Consensus 74 V 74 (182)
|
T Consensus 83 V 83 (83)
T d2cqca1 83 V 83 (83)
T ss_dssp E
T ss_pred C
Confidence 7
No 24
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=3.6e-21 Score=132.61 Aligned_cols=75 Identities=25% Similarity=0.395 Sum_probs=69.1
Q ss_pred CCEEEEccCCCCCCCHHHHHHhhccCCceEEEEEe---CCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEeecCC
Q 030175 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR---RNFAFVQFETQEEATKALESTDRSKLVDRVISVEYALKDD 81 (182)
Q Consensus 7 ~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i~---~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a~~~~ 81 (182)
+.+|||+||+|..+++++|.++|++||+|..|.|. +|||||+|++.++|++||+.|||..|.|+.|+|++++...
T Consensus 2 ~~~l~V~nL~p~~~te~~L~~~F~~fG~I~~v~i~~~~kg~afV~f~~~~~A~~ai~~lng~~l~g~~l~v~~s~~~~ 79 (109)
T d2adca1 2 NSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKHQN 79 (109)
T ss_dssp CSEEEEESCCTTTCCHHHHHHHHHHHTCEEEEEECCTTSCCEEEEESCHHHHHHHHHHHTTCBCSSSBCEEECCSCCC
T ss_pred CCEEEEeCCCcccCCHHHHHHHHhhccccceEEEEecccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCCC
Confidence 57999999966679999999999999999999983 6899999999999999999999999999999999987543
No 25
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=6.1e-22 Score=131.56 Aligned_cols=73 Identities=22% Similarity=0.292 Sum_probs=67.6
Q ss_pred CEEEEccCCCCCCCHHHHHHhhccCCceEEEEE-eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEeecCC
Q 030175 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI-RRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYALKDD 81 (182)
Q Consensus 8 ~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i-~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a~~~~ 81 (182)
++|||+|| |++|++++|+++|++||+|..+.| ..|||||+|.+.++|++||+.|||..|.|+.|.|.++..+.
T Consensus 1 nrvfV~nl-p~~~~~~~l~~~F~~~G~v~~~~i~~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~i~v~~~~~~~ 74 (87)
T d3begb1 1 NRVVVSGL-PPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVKV 74 (87)
T ss_dssp CCEEEEEC-CSSCCTTHHHHHHGGGSCEEEEEECTTSEEEEEESSHHHHHHHHHHHTTCBCCCTTSCCCBCEEEE
T ss_pred CeEEEECC-CCcCCHHHHHHHHhhhcccccccccccceeeEEeCCHHHHHHHHHHhCCCEECCcEeEEeEEecCc
Confidence 36999999 899999999999999999999988 46899999999999999999999999999999999886553
No 26
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=4.8e-21 Score=127.44 Aligned_cols=76 Identities=17% Similarity=0.265 Sum_probs=68.5
Q ss_pred CCCCEEEEccCCCCCCCHHHHHHhhccCC-ceEEEEEeCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEeecCC
Q 030175 5 RPTKTLFVINFDPIRTRERDIKRHFEPYG-NVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYALKDD 81 (182)
Q Consensus 5 ~~~~~l~V~nL~p~~~~e~~L~~~F~~~G-~i~~~~i~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a~~~~ 81 (182)
..+.+|||+|| |+.+++++|+++|++|| .+..+...++||||+|.+.++|++||+.||++.|.|+.|.|++++.+.
T Consensus 3 s~s~~i~V~nL-p~~~t~~~l~~lF~~~G~~~~~~~~~kg~afV~f~~~~~A~~Ai~~ln~~~~~G~~l~V~~a~~~~ 79 (88)
T d1wg1a_ 3 SGSSGILVKNL-PQDSNCQEVHDLLKDYDLKYCYVDRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQPTDA 79 (88)
T ss_dssp CCCCCEEEESC-CSSCCHHHHHHHTCSSCCCCEEEEGGGTEEEECCSCHHHHHHHHHHHTTEEETTEEEEEEECCCCC
T ss_pred CCCCEEEEeCC-CCccChHHHHHHHHhcCceeeeeeccCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCCC
Confidence 35678999999 89999999999999999 555655579999999999999999999999999999999999997543
No 27
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.84 E-value=2.6e-21 Score=133.71 Aligned_cols=75 Identities=24% Similarity=0.287 Sum_probs=70.0
Q ss_pred CCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEeecCC
Q 030175 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--RRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYALKDD 81 (182)
Q Consensus 6 ~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a~~~~ 81 (182)
..++|||+|| |..+++++|.++|++||+|..|.| .++||||+|.+.++|++||+.|||..|.|+.|.|+|+....
T Consensus 9 ~~~~l~V~nL-p~~~t~~~L~~~F~~fG~I~~v~l~~~kg~afV~f~~~~~A~~A~~~lng~~~~gr~l~v~~a~~~~ 85 (111)
T d1whxa_ 9 SKTVILAKNL-PAGTLAAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPIGV 85 (111)
T ss_dssp EEEEEEEESC-CTTCCHHHHHHHHHTTSCEEEEECCSSSSCEEEEESCHHHHHHHHHHHTTCBSSSSBCEEEEEETTT
T ss_pred CCCEEEEECC-CCCCCHHHHHhhhhccCCccEEEeeccCceEEEEEcCHHHHHHHHHHHcCCccCCCeEEEEECCCCc
Confidence 4578999999 889999999999999999999999 47899999999999999999999999999999999997654
No 28
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.84 E-value=2.4e-21 Score=126.83 Aligned_cols=72 Identities=21% Similarity=0.317 Sum_probs=66.5
Q ss_pred CCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEee
Q 030175 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYAL 78 (182)
Q Consensus 7 ~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a~ 78 (182)
.++|||+|| |+.+++++|+++|++||.|..+.+ .+|||||+|.+.++|++||+.|||..|.|+.|.|++++
T Consensus 1 d~tl~v~nL-p~~~t~~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~~~~g~~i~V~~a~ 79 (81)
T d2ghpa1 1 ECTLWMTNF-PPSYTQRNIRDLLQDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIEGYTLVTKVSN 79 (81)
T ss_dssp SCEEEEECC-CTTCCHHHHHHHHHHTTCCCCEEECC-------CCEEEEECSSHHHHHHHHHHHTTCEETTEECEEEECC
T ss_pred CcEEEEECC-CCcCCHHHHHHHHHHhCcEEeeeeecccccccccceeEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcc
Confidence 379999999 899999999999999999977665 47899999999999999999999999999999999997
Q ss_pred c
Q 030175 79 K 79 (182)
Q Consensus 79 ~ 79 (182)
|
T Consensus 80 P 80 (81)
T d2ghpa1 80 P 80 (81)
T ss_dssp C
T ss_pred C
Confidence 5
No 29
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.84 E-value=3.7e-21 Score=127.01 Aligned_cols=70 Identities=26% Similarity=0.428 Sum_probs=65.5
Q ss_pred EEEccCCCCCCCHHHHHHhhccCCceEEEEE-----------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEee
Q 030175 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRI-----------RRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYAL 78 (182)
Q Consensus 10 l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i-----------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a~ 78 (182)
|||+|| |+++++++|+++|++||+|..|.| .+|||||+|.+.++|++||+.|||..|+|+.|.|++|.
T Consensus 1 LfV~nL-p~~~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~~~g~~i~V~~a~ 79 (85)
T d2cpfa1 1 LFIKNL-NFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISE 79 (85)
T ss_dssp EEEESC-CTTCCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETTEECEEECSS
T ss_pred CEEcCC-CCCCCHHHHHHHHHHhCCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECC
Confidence 899999 899999999999999999999888 26799999999999999999999999999999999986
Q ss_pred cC
Q 030175 79 KD 80 (182)
Q Consensus 79 ~~ 80 (182)
..
T Consensus 80 ~~ 81 (85)
T d2cpfa1 80 RA 81 (85)
T ss_dssp CS
T ss_pred CC
Confidence 43
No 30
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=4.6e-21 Score=125.29 Aligned_cols=69 Identities=20% Similarity=0.463 Sum_probs=65.7
Q ss_pred EEEEccCCCCCCCHHHHHHhhccCCceEEEEE--------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEee
Q 030175 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYAL 78 (182)
Q Consensus 9 ~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a~ 78 (182)
.|||+|| |..+++++|.++|++||+|..|.| .+|||||+|.+.++|+.||+.|||..|.|+.|+|+||+
T Consensus 2 slfV~nL-~~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~~gr~i~v~~a~ 78 (80)
T d1cvja1 2 SLYVGDL-HPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQ 78 (80)
T ss_dssp EEEEESC-CTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEETTEECEEEECC
T ss_pred EEEEeCC-CCcCCHHHHHHHHHHhCCEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeC
Confidence 6999999 889999999999999999999998 26899999999999999999999999999999999985
No 31
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.84 E-value=4.5e-21 Score=124.77 Aligned_cols=69 Identities=23% Similarity=0.376 Sum_probs=65.8
Q ss_pred EEEEccCCCCCCCHHHHHHhhccCCceEEEEE-------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEee
Q 030175 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYAL 78 (182)
Q Consensus 9 ~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i-------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a~ 78 (182)
+|||+|| |+.+++++|+++|++||+|..|.| .+|||||+|.+.++|+.||+.|||..|.|+.|+|++|.
T Consensus 2 rl~V~nL-p~~~~~~~l~~~F~~~G~v~~~~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~l~g~~l~V~~a~ 77 (78)
T d1no8a_ 2 KLLVSNL-DFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVT 77 (78)
T ss_dssp EEEEESC-CTTCCHHHHHHHHHHHSCEEEEEESCSSCCCSCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEEEC
T ss_pred EEEEECC-CCCCCHHHHHHHHHHhCCCeEEEEEEeeccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEee
Confidence 6999999 889999999999999999999998 36899999999999999999999999999999999985
No 32
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.84 E-value=5.1e-21 Score=129.81 Aligned_cols=76 Identities=18% Similarity=0.268 Sum_probs=70.6
Q ss_pred CCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE-eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEeecCCC
Q 030175 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI-RRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYALKDDS 82 (182)
Q Consensus 6 ~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i-~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a~~~~~ 82 (182)
...+|||+|| |+.+++++|+++|++||+|+.|.| .+|||||+|.+.++|++||+.|||..|.|+.|.|.+++....
T Consensus 14 ~~~~i~V~Nl-p~~~~~~~L~~~F~~~G~v~~~~i~~~g~afV~f~~~~~a~~Ai~~lng~~~~g~~i~v~~~~~~~~ 90 (98)
T d1wg4a_ 14 SDFRVLVSGL-PPSGSWQDLKDHMREAGDVCYADVQKDGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRVYPE 90 (98)
T ss_dssp CSCEEEEECC-CSSCCHHHHHHHHTTSSCEEEEEEETTTEEEEEESSHHHHHHHHHHHSSEEEECTTSCEEEEEEECC
T ss_pred CCCEEEEECC-CCCCCHHHHHHHHHhhcccccccccccceEEEEECCHHHHHHHHHHhCCCEeCCeEEEEEEEecCCC
Confidence 4668999999 899999999999999999999998 478999999999999999999999999999999999986543
No 33
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=4.5e-21 Score=126.78 Aligned_cols=73 Identities=16% Similarity=0.331 Sum_probs=68.4
Q ss_pred CEEEEccCCCCCCCHHHHHHhhccCCceEEEEEe--------CCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEeec
Q 030175 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR--------RNFAFVQFETQEEATKALESTDRSKLVDRVISVEYALK 79 (182)
Q Consensus 8 ~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i~--------~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a~~ 79 (182)
.+|||+|| |+.+++++|+++|++||+|..|.|. +|||||+|.++++|+.|++.|||..|.|+.|.|++|..
T Consensus 2 ~rlfV~nl-p~~~te~~l~~~F~~~G~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~l~g~~l~V~~A~~ 80 (85)
T d2u2fa_ 2 HKLFIGGL-PNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASV 80 (85)
T ss_dssp CCEEEETC-CSSCCSHHHHHHHTSSSCEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSCCCSSSCCEEEECCC
T ss_pred CEEEEECC-CCCCCHHHHHHHHHhcCccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 47999999 8999999999999999999999882 68999999999999999999999999999999999976
Q ss_pred CC
Q 030175 80 DD 81 (182)
Q Consensus 80 ~~ 81 (182)
..
T Consensus 81 ~~ 82 (85)
T d2u2fa_ 81 GA 82 (85)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 34
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.83 E-value=3.4e-21 Score=130.14 Aligned_cols=78 Identities=23% Similarity=0.406 Sum_probs=71.3
Q ss_pred CCCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE---eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEeecC
Q 030175 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI---RRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYALKD 80 (182)
Q Consensus 4 ~~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i---~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a~~~ 80 (182)
..+.++|||+|| |.++++++|+++|.+||.|..+.. .++||||+|.+.++|++||+.|||..|.|+.|.|+|+.++
T Consensus 13 ~~~~~~l~V~nL-~~~~te~~l~~~F~~~g~v~~~~~~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~gr~i~V~~a~~k 91 (96)
T d1fjca_ 13 VRAARTLLAKNL-SFNITEDELKEVFEDALEIRLVSQDGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTGEK 91 (96)
T ss_dssp TTGGGEEEEESC-CSSCCHHHHHHHHCSEEEECCEEETTEEEEEEEEEESSHHHHHHHHHHTTEEEETTEEEEEEECSSS
T ss_pred CCCCCEEEEeCC-CCCCCHHHHHHHHHhcccceeeeecCccccEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEEeCCC
Confidence 345789999999 889999999999999999887766 5899999999999999999999999999999999999876
Q ss_pred CC
Q 030175 81 DS 82 (182)
Q Consensus 81 ~~ 82 (182)
..
T Consensus 92 ~~ 93 (96)
T d1fjca_ 92 GG 93 (96)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 35
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=7.1e-21 Score=126.46 Aligned_cols=75 Identities=28% Similarity=0.394 Sum_probs=68.8
Q ss_pred CCCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE----eCCEEEEEeCCHHHHHHHHHhcCCCcc-CCcEEEEEEee
Q 030175 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI----RRNFAFVQFETQEEATKALESTDRSKL-VDRVISVEYAL 78 (182)
Q Consensus 4 ~~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i----~~g~afV~f~~~~~a~~Ai~~l~g~~~-~g~~l~V~~a~ 78 (182)
.+|+++|||+|| |..+++++|+++|++||.|..+.+ .++||||+|++.++|++|+..|||..| .|+.|+|+|++
T Consensus 7 ~pPs~tL~V~NL-p~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~afV~f~~~~~A~~A~~~l~~~~i~~g~~l~v~~sk 85 (88)
T d2adca2 7 FPPSATLHLSNI-PPSVSEEDLKVLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSK 85 (88)
T ss_dssp CCSCSEEEEECC-CTTCCHHHHHHHHHTTSCCEEEEEECSSSTTCEEEEESSHHHHHHHHHHHTTCBSSSSCBCEEEECS
T ss_pred CCCCCEEEEECC-CCCCCHHHHHHHhhccCCEEEEEEeeecccceeEEEECCHHHHHHHHHhccCCEecCCCEEEEEeCC
Confidence 467899999999 899999999999999999988766 378999999999999999999999988 58999999997
Q ss_pred c
Q 030175 79 K 79 (182)
Q Consensus 79 ~ 79 (182)
.
T Consensus 86 ~ 86 (88)
T d2adca2 86 S 86 (88)
T ss_dssp S
T ss_pred C
Confidence 5
No 36
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.83 E-value=6.2e-21 Score=126.38 Aligned_cols=75 Identities=29% Similarity=0.462 Sum_probs=70.0
Q ss_pred CCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEEe--CCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEeecCC
Q 030175 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR--RNFAFVQFETQEEATKALESTDRSKLVDRVISVEYALKDD 81 (182)
Q Consensus 6 ~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i~--~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a~~~~ 81 (182)
..++|||+|| |..+++++|+++|++||+|..|.|. ++||||+|.+.++|++||+.|||..|.|+.|+|+||....
T Consensus 7 ~~~~l~V~nL-p~~~~~~~l~~~F~~~G~i~~i~~~~~k~~afV~f~~~~~A~~A~~~l~g~~i~g~~l~V~~A~~~~ 83 (86)
T d2cpja1 7 QRSRLFVGNL-PPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSA 83 (86)
T ss_dssp CTTEEEEESC-CTTCCHHHHHHHTSTTCCCSEEEEETTTTEEEEECSSSHHHHHHHHHHTTCCBTTBCCEEEESSCCS
T ss_pred CCCEEEEECC-CCCCCHHHHHHHHHHhCCceEeeeecccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCcC
Confidence 4568999999 8899999999999999999999984 7999999999999999999999999999999999997653
No 37
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.83 E-value=8.8e-21 Score=125.27 Aligned_cols=73 Identities=26% Similarity=0.466 Sum_probs=66.9
Q ss_pred CCCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--------eCCEEEEEeCCHHHHHHHHHhcCCCccCC--cEEE
Q 030175 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTDRSKLVD--RVIS 73 (182)
Q Consensus 4 ~~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g--~~l~ 73 (182)
...+++|||+|| |..+++++|+++|++||+|..|.| ++|||||+|.+.++|++||+.|||..+.| ++|.
T Consensus 3 ~~~~t~lfV~nl-p~~~te~~l~~~F~~~G~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~~~l~ 81 (85)
T d1b7fa2 3 SIKDTNLYVTNL-PRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLS 81 (85)
T ss_dssp TTTTCEEEEESC-CTTCCHHHHHHHHTSSSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCE
T ss_pred CCCCCEEEEeCC-CCCCCHHHHHHHHHhhCCEeeeeeecccccccCceeEEEEECCHHHHHHHHHHHCCCEeCCCCeEEE
Confidence 456778999999 899999999999999999999988 36799999999999999999999999976 7899
Q ss_pred EEEe
Q 030175 74 VEYA 77 (182)
Q Consensus 74 V~~a 77 (182)
|+||
T Consensus 82 V~~A 85 (85)
T d1b7fa2 82 VRLA 85 (85)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9987
No 38
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=1.8e-20 Score=128.10 Aligned_cols=76 Identities=20% Similarity=0.402 Sum_probs=68.1
Q ss_pred CCCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEE
Q 030175 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTDRSKLVDRVISVE 75 (182)
Q Consensus 4 ~~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~ 75 (182)
+...++|||+|| |+.+++++|+++|++||+|..|.| .+|||||+|.+.++|++||+.+|+ .|.|+.|.|+
T Consensus 7 d~~~~~lfV~nL-p~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~-~l~Gr~l~V~ 84 (103)
T d2cqda1 7 DTTFTKIFVGGL-PYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNP-IIDGRKANVN 84 (103)
T ss_dssp SCSSSEEEEECC-CSSCCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSC-EETTEECEEE
T ss_pred CCCCcEEEEeCC-CCcCcHHHHHHHHhhcccccceeccccccccccCCeEEEEECCHHHHHHHHHHCCC-cCCCEEEEEE
Confidence 334567999999 899999999999999999999998 378999999999999999998875 7999999999
Q ss_pred EeecCC
Q 030175 76 YALKDD 81 (182)
Q Consensus 76 ~a~~~~ 81 (182)
+|....
T Consensus 85 ~a~~~~ 90 (103)
T d2cqda1 85 LAYLGA 90 (103)
T ss_dssp ESTTTC
T ss_pred EcCCCC
Confidence 997653
No 39
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=2.5e-21 Score=126.63 Aligned_cols=74 Identities=20% Similarity=0.404 Sum_probs=66.8
Q ss_pred CEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--eCCEEEEEeCCHHHHHHHHHhcCCC-ccCCcEEEEEEeecCCC
Q 030175 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--RRNFAFVQFETQEEATKALESTDRS-KLVDRVISVEYALKDDS 82 (182)
Q Consensus 8 ~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--~~g~afV~f~~~~~a~~Ai~~l~g~-~~~g~~l~V~~a~~~~~ 82 (182)
.+|||+|| |.++++++|+++|++||.|..+.+ .+|||||+|.+.++|++||+.|||. .|.|+.|.|+||.++..
T Consensus 2 n~l~V~nL-p~~~te~~L~~~F~~~G~i~~~~~~~~rg~aFV~f~~~~~A~~Ai~~lng~~~~~G~~i~V~~a~~k~~ 78 (80)
T d2cqha1 2 NKLYIGNL-SPAVTADDLRQLFGDRKLPLAGQVLLKSGYAFVDYPDQNWAIRAIETLSGKVELHGKIMEVDYSVSKKL 78 (80)
T ss_dssp CCEEEECC-CTTCCHHHHHHHHHHTTCCCSSCEEEETTEEEECCSCHHHHHHHHHHHTTTCEETTEECEEEECCCCCC
T ss_pred CEEEEECC-CCCCCHHHHHHHHHHhCcEEEeEEecccceEEEEECCHHHHHHHHHHhCCCeEECCEEEEEEEcCCcCc
Confidence 46999999 899999999999999998866544 6899999999999999999999995 69999999999987654
No 40
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=4.7e-21 Score=130.30 Aligned_cols=79 Identities=19% Similarity=0.207 Sum_probs=70.1
Q ss_pred CCCCCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE----------------eCCEEEEEeCCHHHHHHHHHhcCCC
Q 030175 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI----------------RRNFAFVQFETQEEATKALESTDRS 65 (182)
Q Consensus 2 ~~~~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i----------------~~g~afV~f~~~~~a~~Ai~~l~g~ 65 (182)
.+.....+|||+|| |..+++++|+++|.+||+|..+.+ .++||||+|.+.++|++||+.|||.
T Consensus 3 ~~~~~~~~i~V~nL-p~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~ 81 (101)
T d2cpea1 3 DEDSDNSAIYVQGL-NDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGK 81 (101)
T ss_dssp CCCCCCCEEEEECC-CTTCCHHHHHHHHTTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTC
T ss_pred CCCCCCCEEEEECC-CCcCCHHHHHHHHHHCceEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCCC
Confidence 45667889999999 899999999999999998854332 2589999999999999999999999
Q ss_pred ccCCcEEEEEEeecCC
Q 030175 66 KLVDRVISVEYALKDD 81 (182)
Q Consensus 66 ~~~g~~l~V~~a~~~~ 81 (182)
.|.|+.|+|++|+++.
T Consensus 82 ~~~gr~i~V~~a~~~~ 97 (101)
T d2cpea1 82 DFQGSKLKVSLARKKP 97 (101)
T ss_dssp EETTEECEEECSSCCC
T ss_pred EECCEEEEEEEcCCCC
Confidence 9999999999998754
No 41
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.83 E-value=1.5e-20 Score=127.04 Aligned_cols=79 Identities=30% Similarity=0.492 Sum_probs=70.8
Q ss_pred CCCCCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--------eCCEEEEEeCCHHHHHHHHHhcC------CCcc
Q 030175 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTD------RSKL 67 (182)
Q Consensus 2 ~~~~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--------~~g~afV~f~~~~~a~~Ai~~l~------g~~~ 67 (182)
++..++++|||+|| |+++++++|+++|.+||+|..+.+ .+|||||+|.+.++|++||+.|| |..|
T Consensus 3 ~~~~~~~tlfV~nL-p~~~te~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~ 81 (98)
T d1x4ha1 3 SDVTEGKTVFIRNL-SFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKL 81 (98)
T ss_dssp CCCCCCCCEEEESC-CTTCCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEES
T ss_pred cCCCCCCEEEEcCC-CCcCCHHHHHHHHhccccceeeeeccccccccccceEEEEEcCHHHHHHHHHHcccccccCCcEE
Confidence 45667889999999 899999999999999999998887 37899999999999999999886 5678
Q ss_pred CCcEEEEEEeecCC
Q 030175 68 VDRVISVEYALKDD 81 (182)
Q Consensus 68 ~g~~l~V~~a~~~~ 81 (182)
.|+.|.|++|.++.
T Consensus 82 ~gr~l~v~~a~~k~ 95 (98)
T d1x4ha1 82 DGRQLKVDLAVTRD 95 (98)
T ss_dssp SSCEEEEECCCCCC
T ss_pred CCEEEEEEECCCCC
Confidence 99999999998653
No 42
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=7.7e-21 Score=125.61 Aligned_cols=71 Identities=25% Similarity=0.557 Sum_probs=65.1
Q ss_pred CCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--------eCCEEEEEeCCHHHHHHHHHhcCCCccCC--cEEEEE
Q 030175 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTDRSKLVD--RVISVE 75 (182)
Q Consensus 6 ~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g--~~l~V~ 75 (182)
.+++|||+|| |..+++++|+++|++||+|..|.| .+|||||+|.+.++|++||+.|||..|.| .+|.|.
T Consensus 5 k~~~lfV~nL-p~~~te~~L~~~F~~~G~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G~~~~i~V~ 83 (85)
T d1fxla2 5 RDANLYVSGL-PKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVK 83 (85)
T ss_dssp TTCEEEEESC-CTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEE
T ss_pred CCCEEEEeCC-CCCCCHHHHHHHHHHhCCccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCCCCEEEEEE
Confidence 4678999999 889999999999999999999988 36799999999999999999999999987 559998
Q ss_pred Ee
Q 030175 76 YA 77 (182)
Q Consensus 76 ~a 77 (182)
||
T Consensus 84 ~A 85 (85)
T d1fxla2 84 FA 85 (85)
T ss_dssp EC
T ss_pred eC
Confidence 86
No 43
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.83 E-value=1.8e-20 Score=126.81 Aligned_cols=78 Identities=23% Similarity=0.388 Sum_probs=70.7
Q ss_pred CCCCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--eCCEEEEEeCCHHHHHHHHHhcCCCccCC--cEEEEEEee
Q 030175 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--RRNFAFVQFETQEEATKALESTDRSKLVD--RVISVEYAL 78 (182)
Q Consensus 3 ~~~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--~~g~afV~f~~~~~a~~Ai~~l~g~~~~g--~~l~V~~a~ 78 (182)
...|+++|||+|| |.++++++|+++|++||+|..|.| .++||||+|.+.++|++|++.||+..|.| ..|+|+||+
T Consensus 13 ~~~Ps~tl~V~nL-p~~~t~~~l~~~f~~~G~i~~~~~~~~~~~afV~f~~~~~A~~A~~~l~~~~i~g~~~~l~v~~ak 91 (97)
T d1whya_ 13 KANPTTRLWVGGL-GPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAK 91 (97)
T ss_dssp CCCCCSCEEEECC-CSSCCHHHHHHHHHTTSCEEEEEECSSSCCEEEEESSHHHHHHHHHHHTTCBCSSSSCBCEEEECC
T ss_pred CCCCCCEEEEcCC-CCCCCHHHHHHHHHhhcccceEeeeccccEEEeccCCHHHHHHHHHHhCCCEeCCCceEEEEEeCC
Confidence 3467899999999 889999999999999999999998 46899999999999999999999999976 589999998
Q ss_pred cCC
Q 030175 79 KDD 81 (182)
Q Consensus 79 ~~~ 81 (182)
..+
T Consensus 92 ~~~ 94 (97)
T d1whya_ 92 SGP 94 (97)
T ss_dssp CCC
T ss_pred CCC
Confidence 644
No 44
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=2.5e-20 Score=127.45 Aligned_cols=76 Identities=28% Similarity=0.450 Sum_probs=66.4
Q ss_pred CCCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE---------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEE
Q 030175 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI---------RRNFAFVQFETQEEATKALESTDRSKLVDRVISV 74 (182)
Q Consensus 4 ~~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i---------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V 74 (182)
..+..+|||+|| |+.+++++|+++|++|| |+.+.| .+|||||+|.+.++|++|+ .||++.|.|+.|.|
T Consensus 12 ~~p~~~v~V~nL-p~~~te~~l~~~f~~~g-~~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~-~~~~~~~~gr~l~V 88 (104)
T d1wi8a_ 12 KSPPYTAFLGNL-PYDVTEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSAL-SLNEESLGNKRIRV 88 (104)
T ss_dssp SSSCEEEEEESC-CSSCCHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHH-GGGTCEETTEECEE
T ss_pred CCCCCEEEEeCC-CCcCCHHHHHHHHHHhc-cccceeeeeeccCCCcceeeeEEECCHHHHHHHH-HcCCCEECCEEEEE
Confidence 346789999999 89999999999999999 666655 3689999999999998777 49999999999999
Q ss_pred EEeecCCC
Q 030175 75 EYALKDDS 82 (182)
Q Consensus 75 ~~a~~~~~ 82 (182)
++|.++..
T Consensus 89 ~~a~~~~~ 96 (104)
T d1wi8a_ 89 DVADQAQD 96 (104)
T ss_dssp EECCCCCC
T ss_pred EECCCCCC
Confidence 99987643
No 45
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=8.4e-21 Score=126.21 Aligned_cols=75 Identities=23% Similarity=0.335 Sum_probs=68.4
Q ss_pred CCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE---eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEeecCC
Q 030175 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI---RRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYALKDD 81 (182)
Q Consensus 5 ~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i---~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a~~~~ 81 (182)
..+.+|||+|| |+.+++++|+++|++||+|..|.+ .++||||+|.+.++|++||. ++++|+|+.|.|.+|+++.
T Consensus 3 ~~s~~lfV~nL-p~~~te~~L~~~F~~~G~v~~v~~~~~~~gfafV~f~~~~~a~~a~~--~~~~i~g~~l~v~~a~~k~ 79 (88)
T d1wf0a_ 3 SGSSGVFVGRC-TGDMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSLCG--EDLIIKGISVHISNAEPKH 79 (88)
T ss_dssp SCCCEEEEESC-CSSSCHHHHHHHSTTTSCCCEEECCSSCCSCCEEECSCHHHHHHTTT--CEEEETTEEEEEECCCCCC
T ss_pred CCCCEEEEeCC-CCCCCHHHHHHHHHHcCCceEEEEeeccCceEEEEECCHHHHHHHHh--CCCEECCEEeEEEeCCCCC
Confidence 46789999999 899999999999999999999988 47999999999999999985 7889999999999997654
Q ss_pred C
Q 030175 82 S 82 (182)
Q Consensus 82 ~ 82 (182)
.
T Consensus 80 ~ 80 (88)
T d1wf0a_ 80 N 80 (88)
T ss_dssp C
T ss_pred C
Confidence 3
No 46
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=7.7e-21 Score=124.93 Aligned_cols=72 Identities=29% Similarity=0.579 Sum_probs=65.4
Q ss_pred EEEccCCCCCCCHHHHHHhhccCCceEEE-EE--------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEeecC
Q 030175 10 LFVINFDPIRTRERDIKRHFEPYGNVLHV-RI--------RRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYALKD 80 (182)
Q Consensus 10 l~V~nL~p~~~~e~~L~~~F~~~G~i~~~-~i--------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a~~~ 80 (182)
|||+|| |.++++++|+++|++||.|..+ .| .+|||||+|.+.++|+.||+.|||..|.|+.|.|++|.++
T Consensus 1 lfV~nL-p~~~te~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~~gr~l~v~~a~~k 79 (83)
T d1x5ta1 1 IFIGNL-DPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKK 79 (83)
T ss_dssp EEEECC-CTTCCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEETTEECEEEESCCC
T ss_pred CEEcCC-CCcCcHHHHHHHHHHhCceeeeEEEEeeccccccCceEEEEECCHHHHHHHHHhCCCcEECCEEEEEEEecCC
Confidence 899999 8999999999999999998654 44 3689999999999999999999999999999999999876
Q ss_pred CC
Q 030175 81 DS 82 (182)
Q Consensus 81 ~~ 82 (182)
..
T Consensus 80 ~~ 81 (83)
T d1x5ta1 80 DS 81 (83)
T ss_dssp CC
T ss_pred Cc
Confidence 43
No 47
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.82 E-value=9.1e-21 Score=125.52 Aligned_cols=73 Identities=30% Similarity=0.477 Sum_probs=65.8
Q ss_pred CCCEEEEccCCCCCCC-HHHHHHhhccCCceEEEEE---------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEE
Q 030175 6 PTKTLFVINFDPIRTR-ERDIKRHFEPYGNVLHVRI---------RRNFAFVQFETQEEATKALESTDRSKLVDRVISVE 75 (182)
Q Consensus 6 ~~~~l~V~nL~p~~~~-e~~L~~~F~~~G~i~~~~i---------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~ 75 (182)
+.++|||+|| |..++ +++|+++|++||.|..|.| .+|||||+|.+.++|++||+ ||+..|.|+.|.|+
T Consensus 3 e~~~l~V~nL-p~~~t~ed~l~~~F~~~G~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al~-~n~~~~~gr~l~V~ 80 (86)
T d2ghpa3 3 EGREIMIRNL-STELLDENLLRESFEGFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQ-MNRSLLGNREISVS 80 (86)
T ss_dssp TTTEEEEEEE-CTTTCCHHHHHHHHGGGSCEEEEECCSCCC---CCCEEEEEEESSHHHHHHHGG-GTTEEETTEEEEEE
T ss_pred CCCEEEEECC-CCCcccHHHHHHHHHhhhhccceeeecccCCccccceeeeEEECCHHHHHHHHh-cCCCEECCEEEEEE
Confidence 4689999999 77765 6679999999999999987 26799999999999999996 99999999999999
Q ss_pred EeecC
Q 030175 76 YALKD 80 (182)
Q Consensus 76 ~a~~~ 80 (182)
+|+++
T Consensus 81 ~a~~k 85 (86)
T d2ghpa3 81 LADKK 85 (86)
T ss_dssp ECCCC
T ss_pred EcCCC
Confidence 99865
No 48
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=2e-20 Score=125.11 Aligned_cols=75 Identities=28% Similarity=0.533 Sum_probs=68.6
Q ss_pred CCCEEEEccCCCCCCCHHHHH----HhhccCCceEEEEE-----eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEE
Q 030175 6 PTKTLFVINFDPIRTRERDIK----RHFEPYGNVLHVRI-----RRNFAFVQFETQEEATKALESTDRSKLVDRVISVEY 76 (182)
Q Consensus 6 ~~~~l~V~nL~p~~~~e~~L~----~~F~~~G~i~~~~i-----~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~ 76 (182)
|+++|||+|| |..+++++|+ ++|++||+|..|.+ .+|||||+|.+.++|++|++.|||..|.|+.|.|.|
T Consensus 2 P~~tl~V~nL-p~~~t~~dl~~~l~~~f~~~G~i~~i~~~~~~~~~g~afV~F~~~~~A~~A~~~~~~~~~~g~~l~v~~ 80 (91)
T d1nu4a_ 2 PNHTIYINNL-NEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQY 80 (91)
T ss_dssp CCSEEEEESC-CTTSCHHHHHHHHHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHHHHTTCEETTEECEEEE
T ss_pred CCCEEEEeCC-CCCCCHHHHHHHHHHHhcccccccceEEeeeccCCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEE
Confidence 6899999999 8899998886 46899999999988 379999999999999999999999999999999999
Q ss_pred eecCC
Q 030175 77 ALKDD 81 (182)
Q Consensus 77 a~~~~ 81 (182)
|+.+.
T Consensus 81 ak~~~ 85 (91)
T d1nu4a_ 81 AKTDS 85 (91)
T ss_dssp CSSCC
T ss_pred eCCCc
Confidence 98653
No 49
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=1.9e-20 Score=128.08 Aligned_cols=74 Identities=22% Similarity=0.454 Sum_probs=68.2
Q ss_pred CCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEee
Q 030175 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYAL 78 (182)
Q Consensus 7 ~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a~ 78 (182)
.++|||+|| |+.+++++|+++|.+||+|..+.| .+|||||+|.+.++|++||+ +++..|.|+.|.|.+|.
T Consensus 20 ~~~lfVgnL-p~~~te~~L~~~F~~~G~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al~-~~~~~l~G~~i~V~~a~ 97 (103)
T d1x4ba1 20 FRKLFIGGL-SFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGRVVEPKRAV 97 (103)
T ss_dssp HTEEEEECC-TTCCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHT-SCSEEETTEEEEEECCS
T ss_pred CCEEEEeCC-CCcCCHHHHHHHHHhhCcccceeecccccCCCccCeEEEEECCHHHHHHHHH-hCCCeECCEEEEEEECc
Confidence 468999999 899999999999999999999998 37899999999999999996 79999999999999998
Q ss_pred cCCC
Q 030175 79 KDDS 82 (182)
Q Consensus 79 ~~~~ 82 (182)
++..
T Consensus 98 ~ke~ 101 (103)
T d1x4ba1 98 AREE 101 (103)
T ss_dssp SCCC
T ss_pred ccCC
Confidence 7653
No 50
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=1.9e-20 Score=123.48 Aligned_cols=74 Identities=26% Similarity=0.512 Sum_probs=67.6
Q ss_pred CCCCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEE
Q 030175 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTDRSKLVDRVISV 74 (182)
Q Consensus 3 ~~~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V 74 (182)
++...++|||+|| |+++++++|+++|++||+|..|.| ++|||||+|.+.++|++||+ ++++.|.|+.|.|
T Consensus 2 epe~~~~lfV~nl-p~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~-~~~~~i~Gr~i~V 79 (84)
T d1l3ka1 2 EPEQLRKLFIGGL-SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEP 79 (84)
T ss_dssp CCGGGGEEEEESC-CTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEE
T ss_pred CCCCCcEEEEECC-CCCCCHHHHHHHHHhhccccceeecccccCCCcccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEE
Confidence 3455679999999 899999999999999999999988 47899999999999999997 6999999999999
Q ss_pred EEee
Q 030175 75 EYAL 78 (182)
Q Consensus 75 ~~a~ 78 (182)
..|.
T Consensus 80 ~~A~ 83 (84)
T d1l3ka1 80 KRAV 83 (84)
T ss_dssp EECC
T ss_pred Eeee
Confidence 9875
No 51
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=4.5e-21 Score=130.69 Aligned_cols=78 Identities=27% Similarity=0.428 Sum_probs=70.7
Q ss_pred CCCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEE
Q 030175 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTDRSKLVDRVISVE 75 (182)
Q Consensus 4 ~~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~ 75 (182)
..|+++|||+|| |..+++++|.++|++||.|..+.| .++||||+|.+.++|+.||+.|||..|.|+.|.|+
T Consensus 15 ~~ps~tl~V~nL-p~~~t~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~~fV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~ 93 (102)
T d2cpxa1 15 GEPNKVLYLKNL-SPRVTERDLVSLFARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGYKLYGKILVIE 93 (102)
T ss_dssp CSCCSEEEEECC-CTTCCHHHHHHHTHHHHHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTCBCSSCBCEEE
T ss_pred CCCCCEEEEeCC-CCCCCHHHHHHHHhhccceeeEEeecccccccccccceEEeccHHHHHHHHHHhCCCEECCEEEEEE
Confidence 356889999999 889999999999999998877655 36899999999999999999999999999999999
Q ss_pred EeecCCC
Q 030175 76 YALKDDS 82 (182)
Q Consensus 76 ~a~~~~~ 82 (182)
||+++..
T Consensus 94 ~ak~k~~ 100 (102)
T d2cpxa1 94 FGKNKKQ 100 (102)
T ss_dssp ECCCCSC
T ss_pred eCCCccc
Confidence 9987654
No 52
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=2.6e-20 Score=124.35 Aligned_cols=76 Identities=26% Similarity=0.488 Sum_probs=68.2
Q ss_pred CCCCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEE
Q 030175 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTDRSKLVDRVISV 74 (182)
Q Consensus 3 ~~~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V 74 (182)
....+.+|||+|| |+++++++|+++|++||+|..|.| .+|||||+|.+.++|++||+.+ ..|+|+.|.|
T Consensus 4 ~~~~~~~lfV~nL-p~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~~~--~~l~Gr~i~v 80 (90)
T d2cqga1 4 AVQKTSDLIVLGL-PWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQR--HMIDGRWCDC 80 (90)
T ss_dssp CCCCCCCEEEESC-CSSCCHHHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHSC--EEETTEEEEE
T ss_pred CCcCCCeEEEECC-CCCCCHHHHHHHHHhhcccceeeeccCCCCcccCCEEEEEECCHHHHHHHHhcC--CccCCEEeEE
Confidence 3557889999999 899999999999999999999988 3689999999999999999854 4799999999
Q ss_pred EEeecCC
Q 030175 75 EYALKDD 81 (182)
Q Consensus 75 ~~a~~~~ 81 (182)
.+|.++.
T Consensus 81 ~~a~~k~ 87 (90)
T d2cqga1 81 KLPNSKQ 87 (90)
T ss_dssp ECCCTTC
T ss_pred EeCCCCC
Confidence 9998754
No 53
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=1.1e-20 Score=129.36 Aligned_cols=73 Identities=25% Similarity=0.506 Sum_probs=68.0
Q ss_pred CCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEee
Q 030175 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYAL 78 (182)
Q Consensus 7 ~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a~ 78 (182)
.++|||+|| |..+++++|+++|++||+|..|.| .+|||||+|.+.++|++||+.|||..|.|+.|.|++|.
T Consensus 8 ~rtl~V~nL-p~~~te~~l~~~f~~~G~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~~g~~i~V~~a~ 86 (104)
T d1p1ta_ 8 LRSVFVGNI-PYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAA 86 (104)
T ss_dssp HSCEEEESC-CTTSCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCSSSCBEEEETT
T ss_pred CCEEEEECC-CCcCCHHHHHHhhhccccccccccccccceeccCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECC
Confidence 468999999 889999999999999999999987 35799999999999999999999999999999999987
Q ss_pred cC
Q 030175 79 KD 80 (182)
Q Consensus 79 ~~ 80 (182)
++
T Consensus 87 ~~ 88 (104)
T d1p1ta_ 87 SE 88 (104)
T ss_dssp CT
T ss_pred CC
Confidence 54
No 54
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=8.2e-21 Score=130.89 Aligned_cols=80 Identities=20% Similarity=0.276 Sum_probs=72.2
Q ss_pred CCCCCCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE----eCCEEEEEeCCHHHHHHHHHhcCCCcc--CCcEEEE
Q 030175 1 MANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI----RRNFAFVQFETQEEATKALESTDRSKL--VDRVISV 74 (182)
Q Consensus 1 s~~~~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i----~~g~afV~f~~~~~a~~Ai~~l~g~~~--~g~~l~V 74 (182)
|+.+.+..+|||+|| ++.+|+++|+++|++||.|..|.| .+|||||+|.+.++|+.||+.|||..| .+..|.|
T Consensus 1 ~~~~s~~~~v~V~NL-~~~vte~~L~~~F~~~G~i~~~~i~~~~~~g~aFV~f~~~e~A~~Ai~~ln~~~l~~~~~~l~v 79 (108)
T d2adba1 1 MAGQSPVLRIIVENL-FYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRI 79 (108)
T ss_dssp SCCCCCEEEEESCSC-CSTTHHHHHHHHHTTTSCEEEEEEEEETTEEEEEEEESCHHHHHHHHHHHHSCCSSTTCCCCEE
T ss_pred CCCCCCeEEEEEeCc-CCCCCHHHHHHHHccCCcEEEEEEEeeCCCCeEEEEECCHHHHHHHHHHHCCCEeccCCcEEEE
Confidence 667888999999999 899999999999999999999988 368999999999999999999999998 4678888
Q ss_pred EEeecCC
Q 030175 75 EYALKDD 81 (182)
Q Consensus 75 ~~a~~~~ 81 (182)
.+++.+.
T Consensus 80 ~~s~~~~ 86 (108)
T d2adba1 80 DFSKLTS 86 (108)
T ss_dssp EECSSCS
T ss_pred EecCCcc
Confidence 8887644
No 55
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=6.3e-20 Score=121.83 Aligned_cols=79 Identities=20% Similarity=0.375 Sum_probs=71.7
Q ss_pred CCCCCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEEe--CCEEEEEeCCHHHHHHHHHhc--CCCccCCcEEEEEEe
Q 030175 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR--RNFAFVQFETQEEATKALEST--DRSKLVDRVISVEYA 77 (182)
Q Consensus 2 ~~~~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i~--~g~afV~f~~~~~a~~Ai~~l--~g~~~~g~~l~V~~a 77 (182)
.+.+|+++|||+|| |..+++++|+++|++||.|..+.+. ++||||+|.+.++|+.|++.| ++..|.|+.|.|.|+
T Consensus 3 ~~~~Ps~~l~V~nL-p~~~t~~~L~~~f~~~G~i~~v~~~~~~~~afV~f~~~e~A~~a~~~~~~~~~~~~g~~l~v~~s 81 (88)
T d2cq1a1 3 MDGAPSRVLHIRKL-PGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYS 81 (88)
T ss_dssp CCSSCCSEEEEESC-CTTCCHHHHHHTTTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHHHHHSCCEETTEECEEEEC
T ss_pred CCCCCCCEEEEeCC-CCCCCHHHHHHHHhcccccccccccccceEEEEEeCCHHHHHHHHHHHccCCCccCCCEEEEEEC
Confidence 36789999999999 8899999999999999999999984 799999999999999999865 567899999999999
Q ss_pred ecCC
Q 030175 78 LKDD 81 (182)
Q Consensus 78 ~~~~ 81 (182)
+.+.
T Consensus 82 k~~~ 85 (88)
T d2cq1a1 82 NHKE 85 (88)
T ss_dssp SCSS
T ss_pred CCCC
Confidence 7654
No 56
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.81 E-value=1.5e-19 Score=123.72 Aligned_cols=81 Identities=16% Similarity=0.212 Sum_probs=72.0
Q ss_pred CCCCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--eCCEEEEEeCCHHHHHHHHHhc--CCCccCCcEEEEEEee
Q 030175 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--RRNFAFVQFETQEEATKALEST--DRSKLVDRVISVEYAL 78 (182)
Q Consensus 3 ~~~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--~~g~afV~f~~~~~a~~Ai~~l--~g~~~~g~~l~V~~a~ 78 (182)
..+++.+|||+|| |..+++++|.++|.+||.|..|.| .+++|||+|++.++|+.||..| ++..+.|+.|.|+|++
T Consensus 11 ~~~ps~~l~v~nl-p~~~te~~l~~~F~~fG~I~~~~~~~~k~~AfV~f~~~e~A~~ai~~~~~~~~~~~g~~l~v~~s~ 89 (104)
T d1wexa_ 11 KVSVSPVVHVRGL-CESVVEADLVEALEKFGTICYVMMMPFKRQALVEFENIDSAKECVTFAADVPVYIAGQQAFFNYST 89 (104)
T ss_dssp CCCCCSEEEEESC-CSSCCHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHHHHHSCCBSSSSBCEEEECS
T ss_pred cCCCCCEEEEeCC-CCCCCHHHHHHhhhhcccceEEEEEecceeEEEEeCCHHHHHHHHHHHcCCCcEEeeEEEEEEEcC
Confidence 4568999999999 889999999999999999999998 4799999999999999999987 4567889999999998
Q ss_pred cCCCCC
Q 030175 79 KDDSER 84 (182)
Q Consensus 79 ~~~~~~ 84 (182)
.+....
T Consensus 90 ~~~~~~ 95 (104)
T d1wexa_ 90 SKRITR 95 (104)
T ss_dssp SSSCCC
T ss_pred CCccCC
Confidence 765443
No 57
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=8.4e-20 Score=118.72 Aligned_cols=69 Identities=28% Similarity=0.458 Sum_probs=64.0
Q ss_pred CCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEe
Q 030175 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77 (182)
Q Consensus 7 ~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a 77 (182)
.++|||+|| |+.+++++|+++|++||.|..+.+ .+|||||+|.+.++|++|++ |||..|.|+.|+|+.|
T Consensus 2 ~r~lfV~nL-p~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al~-~~~~~l~Gr~i~V~~A 78 (79)
T d1l3ka2 2 VKKIFVGGI-KEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVRKA 78 (79)
T ss_dssp CSEEEEECC-TTTCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-CSCCEETTEECEEEEC
T ss_pred CCEEEECCC-CCcCCHHHHHHHHHHhccccccccccCCCCcccccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEEC
Confidence 468999999 899999999999999999999888 36899999999999999996 8999999999999876
No 58
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.80 E-value=1.6e-20 Score=121.92 Aligned_cols=68 Identities=25% Similarity=0.444 Sum_probs=64.0
Q ss_pred CEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEe
Q 030175 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77 (182)
Q Consensus 8 ~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a 77 (182)
++|||+|| |+.+++++|+++|++||+|..+.| ++|||||+|.+.++|++||+ ++++.|+|+.|.|.+|
T Consensus 1 cklfV~nL-p~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~-~~~~~i~Gr~i~V~~A 76 (77)
T d1uawa_ 1 CKMFIGGL-SWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA-QSRHELDSKTIDPKVA 76 (77)
T ss_dssp CCEEEESC-CSSCCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHH-TTTCCCSSCCCEEEEC
T ss_pred CEEEEeCC-CCcCCHHHHHHHHHHhCCcceeeeecccCCCCccceEEEEECCHHHHHHHHH-cCCCEECCeEEEEEEC
Confidence 57999999 899999999999999999999888 47899999999999999997 7999999999999987
No 59
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.80 E-value=1.3e-19 Score=116.93 Aligned_cols=69 Identities=20% Similarity=0.353 Sum_probs=63.1
Q ss_pred EEEccCCCCCCCHHHHHHhhccCCceEEEEE--eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEeecC
Q 030175 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRI--RRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYALKD 80 (182)
Q Consensus 10 l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a~~~ 80 (182)
|||+|| |.++++++|+++|++|| +..+.+ .+|||||+|.+.++|++|++.|||..|.|+.|.|++++..
T Consensus 1 i~V~nL-p~~~t~~~l~~~F~~~g-~~~~~~~~~~g~afv~f~~~~~A~~Ai~~ln~~~~~g~~l~V~~a~~d 71 (75)
T d1wi6a1 1 ILIRGL-PGDVTNQEVHDLLSDYE-LKYCFVDKYKGTAFVTLLNGEQAEAAINTFHQSRLRERELSVQLQPTD 71 (75)
T ss_dssp EEEECC-CTTCCHHHHHHHTTTSC-EEEEEEETTTTEEEEEESSHHHHHHHHHHHTTEESSSCEEEEEECCST
T ss_pred CEEeCC-CCcCCHHHHHHHHhccc-ccceeecccceeEEEEECCHHHHHHHHHHhCCccCCCCEEEEEEeCCC
Confidence 799999 89999999999999999 444444 6899999999999999999999999999999999999654
No 60
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=5.4e-20 Score=118.71 Aligned_cols=67 Identities=28% Similarity=0.546 Sum_probs=62.0
Q ss_pred EEEEccCCCCCCCHHHHHHhhccCCceEEEEE--------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEe
Q 030175 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77 (182)
Q Consensus 9 ~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a 77 (182)
+|||+|| |+++++++|.++|++||+|..|.| .+|||||+|.+.++|++||+ +++..|+|+.|.|..|
T Consensus 1 klfV~nl-~~~~te~~l~~~F~~~G~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~-~~~~~l~Gr~i~V~rA 75 (75)
T d1hd0a_ 1 KMFIGGL-SWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD-QKEHKLNGKVIDPKRA 75 (75)
T ss_dssp CEEEECC-CTTCCHHHHHHHHHTTSCEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHH-TCCCCBTTBCCEECCC
T ss_pred CEEEeCC-CCcCCHHHHHHHHHhhccccccccccCCCCCCcCceEEEEECCHHHHHHHHh-cCCCEECCCEEEeeEC
Confidence 4999999 899999999999999999999998 37999999999999999997 7999999999998643
No 61
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.80 E-value=4.4e-20 Score=118.83 Aligned_cols=67 Identities=27% Similarity=0.505 Sum_probs=62.8
Q ss_pred EEEEccCCCCCCCHHHHHHhhccCCceEEEEE--------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEe
Q 030175 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77 (182)
Q Consensus 9 ~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a 77 (182)
+|||+|| |.++++++|+++|++||.|..+.+ .++||||+|.+.++|++||+ |||+.|+|+.|+|++|
T Consensus 1 rlfV~nL-p~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~-~~~~~l~gr~i~V~~A 75 (75)
T d2msta_ 1 KIFVGGL-SVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE-IHFHEINNKMVECKKA 75 (75)
T ss_dssp CEEEECC-CSSCCHHHHHHHHHTTSCCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHH-CSSCCBTTBCCEEEEC
T ss_pred CEEEeCC-CCCCCHHHHHHHHHHhCCcceeeeeeeccccccCceeEEEECCHHHHHHHHh-cCCCEECCeEEEEEEC
Confidence 4999999 899999999999999999999887 37899999999999999997 9999999999999886
No 62
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.80 E-value=7.2e-21 Score=127.38 Aligned_cols=74 Identities=23% Similarity=0.293 Sum_probs=66.9
Q ss_pred CCCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE-------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEE
Q 030175 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKALESTDRSKLVDRVISVEY 76 (182)
Q Consensus 4 ~~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i-------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~ 76 (182)
+....+|||+|| |+.+++++|+++|++||.|..+.| .+|||||+|.+.++|++||+ |||..|.|+.|.|++
T Consensus 10 ~~~~~~ifV~nL-~~~~te~~l~~~F~~~G~i~~~~v~~~~~g~~kg~afv~F~~~e~a~~Al~-~~g~~~~g~~i~V~~ 87 (91)
T d1fjeb1 10 STTPFNLFIGNL-NPNKSVAELKVAISELFAKNDLAVVDVRTGTNRKFGYVDFESAEDLEKALE-LTGLKVFGNEIKLEK 87 (91)
T ss_dssp CSSSEEEEEECC-CTTSCHHHHHHHHHHHHHHHTCCCCEEEEETTTTEEEEEESSHHHHHHHHH-GGGEEETTEEEEEEC
T ss_pred CCCCcEEEEeCc-cCcchHHHHHHHHhcCCcEEEeeeeecCCCCccEEeEEeeCCHHHHHHHHh-cCCcEECCEEEEEEe
Confidence 345568999999 899999999999999998877666 47999999999999999996 999999999999999
Q ss_pred eec
Q 030175 77 ALK 79 (182)
Q Consensus 77 a~~ 79 (182)
|+.
T Consensus 88 ak~ 90 (91)
T d1fjeb1 88 PKG 90 (91)
T ss_dssp CCC
T ss_pred cCC
Confidence 975
No 63
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=4.8e-20 Score=125.62 Aligned_cols=71 Identities=27% Similarity=0.461 Sum_probs=66.4
Q ss_pred CCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEee
Q 030175 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYAL 78 (182)
Q Consensus 7 ~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a~ 78 (182)
.++|||+|| |+++++++|+++|+.||+|..|.| .+|||||+|.+.++|++||+ |||..|.|+.|.|.+++
T Consensus 18 ~~tifV~nL-~~~~te~~l~~~F~~~G~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~~-l~g~~~~G~~l~V~~a~ 95 (101)
T d2cq4a1 18 ARTVFCMQL-AARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIG-LTGQRLLGVPIIVQASQ 95 (101)
T ss_dssp HTEEEEESC-CTTCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHH-HTTEEETTEEEEEEEHH
T ss_pred CCEEEEECC-CCCCCHHHHHHHHcCCCeEEEEEeeecCCCccccceEEEEECCHHHHHHHHH-HCCCEECCEEEEEEECC
Confidence 468999999 899999999999999999999998 37899999999999999995 99999999999999986
Q ss_pred c
Q 030175 79 K 79 (182)
Q Consensus 79 ~ 79 (182)
+
T Consensus 96 ~ 96 (101)
T d2cq4a1 96 A 96 (101)
T ss_dssp H
T ss_pred C
Confidence 4
No 64
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=2.9e-20 Score=126.59 Aligned_cols=74 Identities=18% Similarity=0.384 Sum_probs=66.9
Q ss_pred CCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE-------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEe
Q 030175 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77 (182)
Q Consensus 5 ~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i-------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a 77 (182)
...++|||+|| |.++++++|+++|++||+|..+.+ .+|||||+|.+.++|++||+.|||..|.|++|.|.++
T Consensus 16 ~~~~~lfV~nL-p~~~te~~L~~~F~~~G~i~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~i~gr~~~v~~~ 94 (101)
T d1x5oa1 16 QDPTNLYISNL-PLSMDEQELENMLKPFGQVISTRILRDSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPT 94 (101)
T ss_dssp CCTTEEEEESC-CTTCCHHHHHHTTTTTSCEEEEEEEECSSSCEEEEEEEEESCHHHHHHHHHHHBTCCCCCCTTSCCCS
T ss_pred CCCCEEEEeCC-CCCCCHHHHHHHHhhcccccceeeecccccccccceeEEeCCHHHHHHHHHHhCCCEECCcCCccCCC
Confidence 45679999999 889999999999999999998877 3679999999999999999999999999999888766
Q ss_pred ec
Q 030175 78 LK 79 (182)
Q Consensus 78 ~~ 79 (182)
++
T Consensus 95 ~P 96 (101)
T d1x5oa1 95 EP 96 (101)
T ss_dssp SC
T ss_pred CC
Confidence 53
No 65
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=6.3e-20 Score=118.45 Aligned_cols=67 Identities=25% Similarity=0.447 Sum_probs=62.1
Q ss_pred EEEEccCCCCCCCHHHHHHhhccCCceEEEEE--------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEe
Q 030175 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77 (182)
Q Consensus 9 ~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a 77 (182)
+|||+|| |+.+++++|+++|++||+|..|.| ++|||||+|.+.++|++||+ +++.+|.|+.|.|.+|
T Consensus 1 klfVgnL-p~~~te~~l~~~F~~~G~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al~-~~~~~i~g~~i~vk~A 75 (75)
T d1x0fa1 1 KIFVGGL-SPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME-KKYHNVGLSKCEIKVA 75 (75)
T ss_dssp EEEEESC-CSSCCHHHHHHHHHHHSCEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHTT-CSSCCBTTBCCEEECC
T ss_pred CEEEcCC-CCCCCHHHHHHHHHHhCCcccccccccccccccccEEEEEECCHHHHHHHHh-hCCCEECCEEeEEEEC
Confidence 5999999 899999999999999999999998 37899999999999999997 5888999999999875
No 66
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=3.9e-19 Score=121.14 Aligned_cols=76 Identities=24% Similarity=0.375 Sum_probs=66.4
Q ss_pred CCCCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE-------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEE
Q 030175 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKALESTDRSKLVDRVISVE 75 (182)
Q Consensus 3 ~~~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i-------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~ 75 (182)
......+|||.|| |+++|+++|+++|..||.+ .|.+ .+|||||+|.+.++|++||+ ||++.|.|+.|+|.
T Consensus 11 ~~~~~~~v~v~nL-p~~~te~dl~~~F~~~~~~-~v~~~~~~~g~~~G~afVeF~~~~~a~~Al~-~~~~~i~gR~I~V~ 87 (102)
T d1weza_ 11 QSTTGHCVHMRGL-PYRATENDIYNFFSPLNPM-RVHIEIGPDGRVTGEADVEFATHEDAVAAMA-KDKANMQHRYVELF 87 (102)
T ss_dssp CCSSSCEEEEESC-CTTCCHHHHHHSSCSCCCS-EEEEEESSSSCEEEEEEEECSSSHHHHHHHT-TSSCCSSSSCCEEE
T ss_pred cCCCCCEEEEeCC-CCcCCHHHHHHHHhccCcc-eeeeEEecCCcceEEEEEEECCHHHHHHHHH-cCCCEECCEEEEEE
Confidence 3456779999999 9999999999999999854 4444 37899999999999999986 89999999999999
Q ss_pred EeecCC
Q 030175 76 YALKDD 81 (182)
Q Consensus 76 ~a~~~~ 81 (182)
++....
T Consensus 88 ~s~~~~ 93 (102)
T d1weza_ 88 LNSTAG 93 (102)
T ss_dssp EECCCC
T ss_pred EcCCCC
Confidence 998654
No 67
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=9.5e-19 Score=119.55 Aligned_cols=78 Identities=22% Similarity=0.267 Sum_probs=68.6
Q ss_pred CCCCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEE
Q 030175 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTDRSKLVDRVISV 74 (182)
Q Consensus 3 ~~~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V 74 (182)
+.....+|||+|| |+.++|++|+++|..+|.|..+.+ .+|||||+|.+.++|++||+ ||+..|.|+.|.|
T Consensus 11 ~~~~~~~v~v~nL-P~~~te~dI~~~F~~~g~v~~~v~~~~~~~~~~kG~afV~F~~~e~a~~a~~-~~~~~i~gR~i~V 88 (104)
T d1wg5a_ 11 DTANDGFVRLRGL-PFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALK-KHKERIGHRYIEI 88 (104)
T ss_dssp SCSCCCEEEEESC-CTTCCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHT-TTTCCSSSSCCEE
T ss_pred CCCCCcEEEEeCC-CCCCCHHHHHHHHHhcCCceEEEEEEeCCCCCcceEEEEEeCCHHHHHHHHh-hCCCEEcceEEEE
Confidence 4456678999999 999999999999999998876544 47999999999999999996 8999999999999
Q ss_pred EEeecCCC
Q 030175 75 EYALKDDS 82 (182)
Q Consensus 75 ~~a~~~~~ 82 (182)
.++.+...
T Consensus 89 ~~~~~~~~ 96 (104)
T d1wg5a_ 89 FKSSRAEV 96 (104)
T ss_dssp EEECTTTS
T ss_pred EECCHHHh
Confidence 99987643
No 68
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=3.5e-19 Score=117.51 Aligned_cols=71 Identities=25% Similarity=0.431 Sum_probs=65.8
Q ss_pred CCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE-------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEee
Q 030175 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYAL 78 (182)
Q Consensus 6 ~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i-------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a~ 78 (182)
..++|||+|| |..+++++|.++|++||+|..|.| .+|||||+|.+.++|++||+ +++..|.|+.|.|+++.
T Consensus 5 ~~rtvfV~nl-p~~~te~~l~~~F~~~G~v~~v~l~~~~~~~~kG~afV~f~~~e~a~~al~-~~~~~~~g~~l~v~~~~ 82 (85)
T d1zh5a2 5 KNRSVYIKGF-PTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVE-TPGQKYKETDLLILFKD 82 (85)
T ss_dssp HTTEEEEECC-CTTCCHHHHHHHHTTSCCEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHT-CCCCEETTEECEEEEGG
T ss_pred CcCEEEEECC-CCCCCHHHHHHHHHHhcccccceeeeeccCCcceEEEEEEcCHHHHHHHHH-HCCCEECCEEEEEEEcC
Confidence 4679999999 899999999999999999999988 36899999999999999996 79999999999999864
No 69
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.78 E-value=3.2e-19 Score=115.05 Aligned_cols=68 Identities=22% Similarity=0.355 Sum_probs=63.2
Q ss_pred CEEEEccCCCCCCCHHHHHHhhccCCceEEEEE------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEe
Q 030175 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI------RRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77 (182)
Q Consensus 8 ~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a 77 (182)
++|||+|| |+.+++++|+++|.+||.|..|.| ..+||||+|.+.++|++||. ||+..|+|+.|.|+.+
T Consensus 1 Ttv~V~nl-p~~~t~~~l~~~F~~~G~I~~v~~~~~~~~~~~~afV~F~~~~~a~~Al~-~~~~~i~g~~i~V~~~ 74 (75)
T d2ghpa2 1 TTVLVKNL-PKSYNQNKVYKYFKHCGPIIHVDVADSLKKNFRFARIEFARYDGALAAIT-KTHKVVGQNEIIVSHL 74 (75)
T ss_dssp CEEEEEEE-CTTCCHHHHHHHHGGGSCEEEEEEEECTTSSSEEEEEEESSHHHHHHHHT-TTTCEETTEECEEEEC
T ss_pred CEEEEECC-CCCCCHHHHHHHHhcCCceEEEEEEeeccccceEEEEEEcchHHhHHHHH-hcCcEECCEEEEEEEC
Confidence 48999999 899999999999999999999998 25799999999999999995 8999999999999875
No 70
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.78 E-value=2.6e-19 Score=121.47 Aligned_cols=77 Identities=21% Similarity=0.365 Sum_probs=68.9
Q ss_pred CCCCCEEEEccCCCCC-CCHHHHHHhhccCCceEEEEE--eCCEEEEEeCCHHHHHHHHH--hcCCCccCCcEEEEEEee
Q 030175 4 QRPTKTLFVINFDPIR-TRERDIKRHFEPYGNVLHVRI--RRNFAFVQFETQEEATKALE--STDRSKLVDRVISVEYAL 78 (182)
Q Consensus 4 ~~~~~~l~V~nL~p~~-~~e~~L~~~F~~~G~i~~~~i--~~g~afV~f~~~~~a~~Ai~--~l~g~~~~g~~l~V~~a~ 78 (182)
..++++|||+|| |.. +++++|.++|++||.|..|.| .++||||+|.+.++|+.||+ .+++..|.|+.|.|.+|+
T Consensus 15 ~~~~~~l~v~nL-p~~~~te~~l~~~F~~fG~V~~v~~~~~k~~afV~f~~~~~A~~Ai~~~~~~~~~~~gr~l~V~~s~ 93 (99)
T d1x4fa1 15 QELGRVIHLSNL-PHSGYSDSAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDAMAMVDHCLKKALWFQGRCVKVDLSE 93 (99)
T ss_dssp SCCCCEEEEESC-CCSSCCSHHHHTTTTTTSCCSEEEEETTTTEEEEECSSHHHHHHHHHHHHHSCCCSSSSCCEEEEEC
T ss_pred CCCCCEEEEeCC-cCCccCHHHHHhhhccccceeEEEEeecCCcEEEEecchHHHHHHHHHHhcCCceECCEEEEEEEcC
Confidence 346789999999 764 899999999999999999998 48999999999999999997 578889999999999997
Q ss_pred cCC
Q 030175 79 KDD 81 (182)
Q Consensus 79 ~~~ 81 (182)
...
T Consensus 94 ~~~ 96 (99)
T d1x4fa1 94 KYK 96 (99)
T ss_dssp SCS
T ss_pred Ccc
Confidence 543
No 71
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=2.8e-19 Score=120.50 Aligned_cols=75 Identities=25% Similarity=0.366 Sum_probs=66.2
Q ss_pred CCEEEEccCCCCCCCHHHHHHhhccCCc-eEEEEE---------eCCEEEEEeCCHHHHHHHHHhcCC--CccCCcEEEE
Q 030175 7 TKTLFVINFDPIRTRERDIKRHFEPYGN-VLHVRI---------RRNFAFVQFETQEEATKALESTDR--SKLVDRVISV 74 (182)
Q Consensus 7 ~~~l~V~nL~p~~~~e~~L~~~F~~~G~-i~~~~i---------~~g~afV~f~~~~~a~~Ai~~l~g--~~~~g~~l~V 74 (182)
+++|||+|| |..+++++|+++|++||+ |..+.| .+|||||+|.+.++|+.||+.|++ ..+.|+.|.|
T Consensus 1 n~rLyV~nL-p~~~te~~l~~~f~~~g~~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~~g~~i~V 79 (96)
T d2disa1 1 NCRLFIGGI-PKMKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAV 79 (96)
T ss_dssp SEEEEEECC-CTTSCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBTTBCCEE
T ss_pred CCEEEEcCC-CCcCCHHHHHHHHHHhCCcceEEEEeeeccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeEECCEEEEE
Confidence 468999999 899999999999999996 888888 257999999999999999999975 4557999999
Q ss_pred EEeecCCC
Q 030175 75 EYALKDDS 82 (182)
Q Consensus 75 ~~a~~~~~ 82 (182)
+||+++..
T Consensus 80 ~~A~p~~~ 87 (96)
T d2disa1 80 DWAEPEID 87 (96)
T ss_dssp EESCSSCS
T ss_pred EEcCCCCC
Confidence 99987553
No 72
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.78 E-value=2.1e-19 Score=119.59 Aligned_cols=70 Identities=19% Similarity=0.387 Sum_probs=63.4
Q ss_pred CCCCEEEEccCCCCCCCHHHH---HHhhccCCceEEEEEe-----------CCEEEEEeCCHHHHHHHHHhcCCCccCCc
Q 030175 5 RPTKTLFVINFDPIRTRERDI---KRHFEPYGNVLHVRIR-----------RNFAFVQFETQEEATKALESTDRSKLVDR 70 (182)
Q Consensus 5 ~~~~~l~V~nL~p~~~~e~~L---~~~F~~~G~i~~~~i~-----------~g~afV~f~~~~~a~~Ai~~l~g~~~~g~ 70 (182)
...++|||+|| |+.+++++| .++|++||+|..|.|. .|||||+|++.++|++||+.|||..|.|+
T Consensus 6 iq~n~vyV~nL-p~~~t~~~l~~~~e~F~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~~~gr 84 (89)
T d2cpia1 6 VQKNLVFVVGL-SQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGR 84 (89)
T ss_dssp CCSSCEEEEEE-CTTTCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTE
T ss_pred EecCEEEEECC-CCccCHHHHHHHHHHhcccCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCCEECCE
Confidence 34568999999 889999999 6789999999999983 37999999999999999999999999999
Q ss_pred EEEEE
Q 030175 71 VISVE 75 (182)
Q Consensus 71 ~l~V~ 75 (182)
.|+|.
T Consensus 85 ~lkvS 89 (89)
T d2cpia1 85 TLKAS 89 (89)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 99984
No 73
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.77 E-value=5.9e-19 Score=117.43 Aligned_cols=77 Identities=18% Similarity=0.318 Sum_probs=69.1
Q ss_pred CCCCCCEEEEccCCCCC-CCHHHHHHhhccCCceEEEEE--eCCEEEEEeCCHHHHHHHHHhc--CCCccCCcEEEEEEe
Q 030175 3 NQRPTKTLFVINFDPIR-TRERDIKRHFEPYGNVLHVRI--RRNFAFVQFETQEEATKALEST--DRSKLVDRVISVEYA 77 (182)
Q Consensus 3 ~~~~~~~l~V~nL~p~~-~~e~~L~~~F~~~G~i~~~~i--~~g~afV~f~~~~~a~~Ai~~l--~g~~~~g~~l~V~~a 77 (182)
..+++.+|||+|| |.. +|++||.++|++||+|..|.| .+++|||+|++.++|+.|++.| ++..+.|++|.|.||
T Consensus 4 ~~~~sr~v~v~nl-~~~~~t~~eL~~lF~~fG~I~~i~i~~~k~~afV~f~~~~~A~~A~~~l~~~~~~~~gr~l~V~~s 82 (89)
T d1x4da1 4 RVETRRVVHIMDF-QRGKNLRYQLLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLS 82 (89)
T ss_dssp CCCCCCEEEEESC-CCSSSHHHHHHTTTGGGSCEEEEEECSSSSCEEEEESSHHHHHHHHHHHHHSCCEETTEECEEEEE
T ss_pred CCCCCcEEEEECC-CCCcCCHHHHHHHHHhhCCeEEEEeeccceEEEEEEcchhhHHHHHHHHhhCCCccCCceEEEEEC
Confidence 4578899999999 665 789999999999999999999 4689999999999999999966 678899999999999
Q ss_pred ecC
Q 030175 78 LKD 80 (182)
Q Consensus 78 ~~~ 80 (182)
+..
T Consensus 83 ~~~ 85 (89)
T d1x4da1 83 QKY 85 (89)
T ss_dssp CCC
T ss_pred CCc
Confidence 754
No 74
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.77 E-value=2e-19 Score=118.78 Aligned_cols=73 Identities=22% Similarity=0.278 Sum_probs=64.9
Q ss_pred CCCCCEEEEccCCCCCCCHHHHHHhhccCCceEE-EEE-------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEE
Q 030175 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLH-VRI-------RRNFAFVQFETQEEATKALESTDRSKLVDRVISVE 75 (182)
Q Consensus 4 ~~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~-~~i-------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~ 75 (182)
.+...+|||+|| |+.+++++|+++|..||.|.. +.+ .+|||||+|.+.++|++||+.||+..|.|+.|+|+
T Consensus 6 ~p~~~~l~v~nL-p~~~~~~di~~~F~~~~~~~~~~~~~~~~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~l~gr~i~v~ 84 (86)
T d2cqpa1 6 KPGPTIIKVQNM-PFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKLV 84 (86)
T ss_dssp CCSSEEEEEESC-CTTCCHHHHHHHTTTSCCCTTTCEEEECSSSCEEEEEEEEESCHHHHHHHHHHTTTCEETTEECEEE
T ss_pred CCCCCEEEEECC-CCCCCHHHHHHHHhhcccceeEEEEEeCCCCCcceEEEEEEcCcHHHHHHHHHcCCCEECCEEEEEE
Confidence 445667999999 899999999999999998754 333 47899999999999999999999999999999998
Q ss_pred Ee
Q 030175 76 YA 77 (182)
Q Consensus 76 ~a 77 (182)
++
T Consensus 85 l~ 86 (86)
T d2cqpa1 85 LG 86 (86)
T ss_dssp ES
T ss_pred EC
Confidence 85
No 75
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.75 E-value=1.9e-18 Score=118.15 Aligned_cols=77 Identities=9% Similarity=0.081 Sum_probs=67.5
Q ss_pred CCCCEEEEccCCCCCC-C----HHHHHHhhccCCceEEEEEe--CCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEe
Q 030175 5 RPTKTLFVINFDPIRT-R----ERDIKRHFEPYGNVLHVRIR--RNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77 (182)
Q Consensus 5 ~~~~~l~V~nL~p~~~-~----e~~L~~~F~~~G~i~~~~i~--~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a 77 (182)
..+.+|||+||+ ..+ + +++|+++|++||.|+.+.+. ++||||+|.+.++|++||+.|||..|.|+.|+|.||
T Consensus 3 ~~~~~L~v~nl~-~~v~~~d~~k~~l~~lF~~~G~i~~~~~~k~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~v~~a 81 (104)
T d1weya_ 3 SGSSGLIACVAN-DDVFSESETRAKFESLFRTYDKDTTFQYFKSFKRVRINFSNPLSAADARLRLHKTEFLGKEMKLYFA 81 (104)
T ss_dssp SCCCEEEEECCC-GGGGSTTTHHHHHHHHHHTTCSSCEEEEETTTTEEEEECSSTTHHHHHHHTSTTSEETTEECEEECC
T ss_pred CCCceEEEEeCC-chhcCcHHHHHHHHHHhcccccceEEEEecCCCEEEEEECCHHHHHHHHHHhcccccCCCEeEEeec
Confidence 467899999995 443 3 36799999999999999984 679999999999999999999999999999999999
Q ss_pred ecCCC
Q 030175 78 LKDDS 82 (182)
Q Consensus 78 ~~~~~ 82 (182)
+....
T Consensus 82 ~~~~~ 86 (104)
T d1weya_ 82 QTLHI 86 (104)
T ss_dssp CCSSC
T ss_pred ccCCC
Confidence 86644
No 76
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=4e-19 Score=113.48 Aligned_cols=63 Identities=21% Similarity=0.497 Sum_probs=58.8
Q ss_pred EEEccCCCCCCCHHHHHHhhccCCceEEEEE--------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEE
Q 030175 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTDRSKLVDRVIS 73 (182)
Q Consensus 10 l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~ 73 (182)
|||+|| |..+++++|.++|++||.|..+.+ .+|||||+|.+.++|++||+.|||..|.|+.|+
T Consensus 1 lyV~nL-p~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~Gr~~k 71 (72)
T d1x4ea1 1 LYIRGL-QPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMAK 71 (72)
T ss_dssp EEEESC-CTTCCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCCEESCC
T ss_pred CEEeCC-CCcCCHHHHHHHHhhhccccccccccccccccccceeEEEECCHHHHHHHHHHhCCCEECCEECc
Confidence 899999 899999999999999999999887 378999999999999999999999999998653
No 77
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=3e-18 Score=116.75 Aligned_cols=73 Identities=22% Similarity=0.243 Sum_probs=64.9
Q ss_pred CCCCEEEEccCCCCCCCHHHHHHhhccCCceEE-EEE-------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEE
Q 030175 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLH-VRI-------RRNFAFVQFETQEEATKALESTDRSKLVDRVISVEY 76 (182)
Q Consensus 5 ~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~-~~i-------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~ 76 (182)
....+|||+|| |+.+++++|.++|..||.|.. +.+ .+|||||+|.+.++|++||+ ||+..|.|+.|.|.+
T Consensus 6 ~~~~~v~v~nL-p~~~t~~~l~~~F~~~g~i~~~~~~~~~~~g~~~G~afV~F~s~~~a~~Al~-~n~~~i~gr~i~V~~ 83 (103)
T d2cpya1 6 SAKVCAHITNI-PFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSER-LHRKKLNGREAFVHV 83 (103)
T ss_dssp SCCCEEEEESC-CTTSCHHHHHHHTTTSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHGG-GCSEEETTEEEEEEE
T ss_pred CCceEEEEeCC-CCCCCHHHHhhhhcccceEEEEEEEEeCCCCCcCccEEEEECCHHHHHHHHh-cCCCeECCcEEEEEE
Confidence 34568999999 999999999999999998865 344 48999999999999999996 899999999999999
Q ss_pred eec
Q 030175 77 ALK 79 (182)
Q Consensus 77 a~~ 79 (182)
+..
T Consensus 84 ~~~ 86 (103)
T d2cpya1 84 VTL 86 (103)
T ss_dssp ECH
T ss_pred CCH
Confidence 864
No 78
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=7.1e-18 Score=116.65 Aligned_cols=74 Identities=16% Similarity=0.260 Sum_probs=64.7
Q ss_pred CCCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEE
Q 030175 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTDRSKLVDRVISVE 75 (182)
Q Consensus 4 ~~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~ 75 (182)
.....+|||+|| |+.+++++|.++|+.||.|..+.+ .+|||||+|.+.++|++||+ ||+..|+|+.|.|.
T Consensus 15 ~~~~~~i~v~nL-p~~~t~~di~~~F~~~g~~~~~~~~~~~~~g~~~G~afVeF~~~e~a~~al~-~~~~~i~gR~i~V~ 92 (112)
T d1wela1 15 HEAGFCVYLKGL-PFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC-RHKQYMGNRFIQVH 92 (112)
T ss_dssp CCCCCEEEEECC-CTTCCHHHHHHHSCSSCBCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHHT-SCSBCSTTSCBEEE
T ss_pred CCCCeEEEEecC-CCcCcHHHHhhHHhhccccccceeeecCcccceeeEEEEEECCHHHHHHHHH-cCCCcCCCEEEEEE
Confidence 445779999999 999999999999999998754322 47899999999999999996 89999999999999
Q ss_pred Eeec
Q 030175 76 YALK 79 (182)
Q Consensus 76 ~a~~ 79 (182)
.+..
T Consensus 93 ~~~~ 96 (112)
T d1wela1 93 PITK 96 (112)
T ss_dssp EECH
T ss_pred EcCh
Confidence 8754
No 79
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=4.7e-17 Score=110.53 Aligned_cols=64 Identities=19% Similarity=0.304 Sum_probs=58.5
Q ss_pred CCCCCCEEEEcc--CCCCCCCHHHHHHhhccCCceEEEEE--eCCEEEEEeCCHHHHHHHHHhcCCCcc
Q 030175 3 NQRPTKTLFVIN--FDPIRTRERDIKRHFEPYGNVLHVRI--RRNFAFVQFETQEEATKALESTDRSKL 67 (182)
Q Consensus 3 ~~~~~~~l~V~n--L~p~~~~e~~L~~~F~~~G~i~~~~i--~~g~afV~f~~~~~a~~Ai~~l~g~~~ 67 (182)
...|+.+|||+| | +..+|+++|+++|++||.|..|.+ .++||||+|.+.++|++|++.|||..|
T Consensus 14 ~~~pt~~l~V~ng~L-~~~vte~~L~~~F~~~G~i~~i~~~~~k~~aFV~f~~~e~A~~A~~~lng~~i 81 (101)
T d2cq2a1 14 VSYATQSLVVANGGL-GNGVSRNQLLPVLEKCGLVDALLMPPNKPYSFARYRTTEESKRAYVTLNGKEV 81 (101)
T ss_dssp CSSCCSEEEEETCTG-GGTCCHHHHHHHHHHHSCEEEEECCTTCSCEEEEESSHHHHHHHHHHTTTCEE
T ss_pred CCCCCceEEEECCCC-CCCCCHHHHHHHHHhhCcccEEeeccCccEEEEEECCHHHHHHHHHHhCCCCC
Confidence 456788999955 9 889999999999999999999988 478999999999999999999999887
No 80
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=3.6e-19 Score=118.56 Aligned_cols=68 Identities=22% Similarity=0.387 Sum_probs=60.4
Q ss_pred CEEEEccCCCCCCCHHHHHHhhccCCceEEEEE-------------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEE
Q 030175 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI-------------RRNFAFVQFETQEEATKALESTDRSKLVDRVISV 74 (182)
Q Consensus 8 ~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i-------------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V 74 (182)
++|||+|| |+.+++++|+++|++||.|..+.+ .+|||||+|.+.++|++|++ |||..|.|+.|+|
T Consensus 2 RrlyVgNL-p~~~te~~l~~~F~~~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~a~~-l~g~~~~Gr~l~V 79 (90)
T d1u2fa_ 2 RRLYVGNI-PFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMA-FDGIIFQGQSLKI 79 (90)
T ss_dssp CEEEECSC-CTTCCTTHHHHHHHHHHTTTTSCCSSSCSEEECCEETTTTEEEEEESSCTTTTTGGG-GSSCCSSSSCCCC
T ss_pred CEEEEcCC-CCccchHHHHHHHHhhCcEEEEEEeccceeeecccCCCceEEEEEeCCHHHHHHHHh-hCCcEECCEEEEE
Confidence 68999999 899999999999999997755443 37899999999999999985 9999999999999
Q ss_pred EEe
Q 030175 75 EYA 77 (182)
Q Consensus 75 ~~a 77 (182)
..+
T Consensus 80 ~r~ 82 (90)
T d1u2fa_ 80 RRP 82 (90)
T ss_dssp BCT
T ss_pred CCC
Confidence 643
No 81
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=2.3e-16 Score=109.11 Aligned_cols=74 Identities=15% Similarity=0.175 Sum_probs=63.8
Q ss_pred CCCC-EEEEccCCCCCCCHHHHHHhhccCCceEEEEEe--CCEEEEEeCCH-HHHHHHHHhcCCCccCCcEEEEEEeec
Q 030175 5 RPTK-TLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR--RNFAFVQFETQ-EEATKALESTDRSKLVDRVISVEYALK 79 (182)
Q Consensus 5 ~~~~-~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i~--~g~afV~f~~~-~~a~~Ai~~l~g~~~~g~~l~V~~a~~ 79 (182)
+.++ .+||||| +..+|+++|+++|++||+|..|.|+ ++||||.|.+. ++|..|+..||+..|.+..+.|.++..
T Consensus 8 ~~g~~~~fvgnL-~~~~tee~Lk~~F~~fG~V~~v~i~~~kg~gfV~F~~~~~~A~~a~~~~~~~~l~~~~~~v~~~~~ 85 (113)
T d1owxa_ 8 KIGCLLKFSGDL-DDQTCREDLHILFSNHGEIKWIDFVRGAKEGIILFKEKAKEALGKAKDANNGNLQLRNKEVTWEVL 85 (113)
T ss_dssp CCCCEEEEEESC-CSSCCHHHHHHHTCSSCCEEEEECCTTCSEEEEEESSCHHHHHHHHHHTTTSCBCTTSSSEEEEEC
T ss_pred CCCCeEEEECCC-CCCCCHHHHHHHHHhcCChheEEEecCCceEEEEecCcHHHHHHHHHHhcCCceecCceEEEEeec
Confidence 3344 4599999 8899999999999999999999995 78999999985 789999999999988877777777654
No 82
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.64 E-value=2.7e-16 Score=116.57 Aligned_cols=75 Identities=27% Similarity=0.438 Sum_probs=68.0
Q ss_pred CCCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEE
Q 030175 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTDRSKLVDRVISVE 75 (182)
Q Consensus 4 ~~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~ 75 (182)
.....+|||+|| |..+++++|.++|..||.|..+.| .+|||||+|.+.++|++||+ +++..|.|+.|.|.
T Consensus 94 ~~~~~~i~V~~l-p~~~te~~L~~~f~~~G~v~~~~i~~~~~~~~~~g~~fV~f~~~e~A~~Al~-~~~~~~~G~~i~V~ 171 (183)
T d1u1qa_ 94 HLTVKKIFVGGI-KEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVR 171 (183)
T ss_dssp TCCCSEEEEECC-CTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHT-SSCEEETTEEEEEE
T ss_pred ccccceeEEccC-CCcCCHHHHhhhhccCCceeeeeeecccccCccceeEEEEECCHHHHHHHHH-hCCCeECCEEEEEE
Confidence 456789999999 899999999999999999999987 35799999999999999997 78899999999999
Q ss_pred EeecC
Q 030175 76 YALKD 80 (182)
Q Consensus 76 ~a~~~ 80 (182)
+|.++
T Consensus 172 ~A~~k 176 (183)
T d1u1qa_ 172 KALSK 176 (183)
T ss_dssp ECCCH
T ss_pred ecCCc
Confidence 98754
No 83
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=7.5e-17 Score=110.04 Aligned_cols=67 Identities=19% Similarity=0.200 Sum_probs=60.3
Q ss_pred EEEccCCCCCCCHHHHHHhhccCCceEEEEE-------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEe
Q 030175 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77 (182)
Q Consensus 10 l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i-------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a 77 (182)
|+|.++ +.+++|++|+++|++||+|..|.| .+|||||+|.+.++|++||+.|||..|+|+.|.|+++
T Consensus 30 ~~v~~~-~~~~~ed~l~e~f~k~G~I~~v~I~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lng~~~~gr~i~v~~s 103 (104)
T d1jmta_ 30 VEMQEH-YDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELS 103 (104)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHTCCEEEEEECCSSSSSSEEEEEEEESCHHHHHHHHHHHTTCEETTEECCEEEC
T ss_pred HHhhhh-hhhhhHHHHHHHhccCCCEEEEEeecCCCCCEeeEEEEEEechhHHHHHHHHHCCCEECCEEEEEEEC
Confidence 556666 566788899999999999999998 3699999999999999999999999999999999985
No 84
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=1.3e-14 Score=97.81 Aligned_cols=80 Identities=18% Similarity=0.259 Sum_probs=67.0
Q ss_pred CCCCCCCEEEEccCC-CCCC---------CHHHHHHhhccCCceEEEEE----eCCEEEEEeCCHHHHHHHHHhcCCCcc
Q 030175 2 ANQRPTKTLFVINFD-PIRT---------RERDIKRHFEPYGNVLHVRI----RRNFAFVQFETQEEATKALESTDRSKL 67 (182)
Q Consensus 2 ~~~~~~~~l~V~nL~-p~~~---------~e~~L~~~F~~~G~i~~~~i----~~g~afV~f~~~~~a~~Ai~~l~g~~~ 67 (182)
+.....++|+|.||- |.++ .+++|++.|++||.|..|.+ .+|||||+|.+.++|++|+..|||..|
T Consensus 3 ~~~~~~r~v~l~nmf~~~~~~~~~~~~~~i~edv~~~~~~~G~V~~v~~~~~~~~G~~fV~f~~~e~A~~A~~~lng~~~ 82 (99)
T d2dita1 3 SRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWF 82 (99)
T ss_dssp CCCCSCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTSCCSEEEEETTCTTCEEEEECSCHHHHHHHHHHSTTCEE
T ss_pred CCCCCccEEEEccCCCHHHhhcchHHHHHHHHHHHHHhcCcccEEEEeccCCCCccEEEEEECCHHHHHHHHHHhCCcEE
Confidence 345678999999971 2211 12678899999999999988 378999999999999999999999999
Q ss_pred CCcEEEEEEeecCC
Q 030175 68 VDRVISVEYALKDD 81 (182)
Q Consensus 68 ~g~~l~V~~a~~~~ 81 (182)
+|+.|.|+++.++.
T Consensus 83 ~gr~i~v~~~~g~~ 96 (99)
T d2dita1 83 GGRQITAQAWDGTT 96 (99)
T ss_dssp TTEECEEEECCSCC
T ss_pred CCEEEEEEEeCCcC
Confidence 99999999987543
No 85
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.55 E-value=3.2e-15 Score=97.32 Aligned_cols=69 Identities=23% Similarity=0.423 Sum_probs=58.6
Q ss_pred CCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--eCCEEEEEeCCHHHHHHHHHhcCCCccCCcE-EEEEEee
Q 030175 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--RRNFAFVQFETQEEATKALESTDRSKLVDRV-ISVEYAL 78 (182)
Q Consensus 7 ~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~-l~V~~a~ 78 (182)
.+.|+|+|| |.+++++.| .+|++||+|..+.+ .++||||+|.+.++|++||+ |||..|.|.. |.|..+.
T Consensus 4 ~~wV~V~G~-p~~~~~~il-~~F~~~G~I~~~~~~~~~~~~fV~f~~~~~A~~Al~-~nG~~~~g~~~vgV~~~~ 75 (81)
T d1wwha1 4 DTWVTVFGF-PQASASYIL-LQFAQYGNILKHVMSNTGNWMHIRYQSKLQARKALS-KDGRIFGESIMIGVKPCI 75 (81)
T ss_dssp GGEEEEECC-CGGGHHHHH-HHHHTTSCEEEEEECSSSSEEEEEESSHHHHHHHHT-TTTCEETTTEECEEEECC
T ss_pred ccEEEEECC-ChHHHHHHH-HHHHhhhhhheEEecCCCCEEEEEEcccHHHHHHHh-cCCCeECCcEEEEEEeCC
Confidence 568999999 777776544 67999999999998 47999999999999999996 8999999985 4576654
No 86
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.47 E-value=1.1e-13 Score=94.01 Aligned_cols=75 Identities=25% Similarity=0.417 Sum_probs=64.0
Q ss_pred CCCCEEEEccCC-CCCC--------CHHHHHHhhccCCceEEEEEe----------CCEEEEEeCCHHHHHHHHHhcCCC
Q 030175 5 RPTKTLFVINFD-PIRT--------RERDIKRHFEPYGNVLHVRIR----------RNFAFVQFETQEEATKALESTDRS 65 (182)
Q Consensus 5 ~~~~~l~V~nL~-p~~~--------~e~~L~~~F~~~G~i~~~~i~----------~g~afV~f~~~~~a~~Ai~~l~g~ 65 (182)
+|+++|+|.||- +..+ ..++|++.|++||.|..|.|+ .|++||+|.+.++|++|++.|||.
T Consensus 2 ~Ps~vl~l~N~~~~~~l~~~~~~~~i~edi~~e~~k~G~v~~v~I~~~~~~~~~~~~g~vfV~f~~~e~A~~A~~~l~Gr 81 (104)
T d1o0pa_ 2 HPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGR 81 (104)
T ss_dssp CCCSEEEEESSCCTTTTTSHHHHHHHHHHHHHHHTTTSCEEEEECCCCTTSSSCTTCCEEEEEESCHHHHHHHHHHHSSC
T ss_pred CCCcEEEEeCCCCHHHcCCchhHHHHHHHHHHHhcccCceEEEEEeecCCCCccCCceEEEEEECCHHHHHHHHHHHCCC
Confidence 578999999982 2222 135789999999999999983 379999999999999999999999
Q ss_pred ccCCcEEEEEEeec
Q 030175 66 KLVDRVISVEYALK 79 (182)
Q Consensus 66 ~~~g~~l~V~~a~~ 79 (182)
.|+|+.|.|.++..
T Consensus 82 ~f~gR~v~v~f~~~ 95 (104)
T d1o0pa_ 82 KFANRVVVTKYCDP 95 (104)
T ss_dssp CSSSSCCEEEEECH
T ss_pred EECCeEEEEEEcCH
Confidence 99999999999863
No 87
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.47 E-value=3.9e-14 Score=104.62 Aligned_cols=75 Identities=25% Similarity=0.500 Sum_probs=64.1
Q ss_pred CCCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--------eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEE
Q 030175 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTDRSKLVDRVISVE 75 (182)
Q Consensus 4 ~~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--------~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~ 75 (182)
++..++|||+|| |+.+++++|.++|++||+|..+.| .+|||||+|.+.++|++|+. +++..+.+..+.+.
T Consensus 3 p~~~r~lfV~nL-p~~~te~~L~~~F~~~G~v~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~-~~~~~~~~~~~~~~ 80 (183)
T d1u1qa_ 3 PEQLRKLFIGGL-SFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPK 80 (183)
T ss_dssp CHHHHEEEEESC-CTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEE
T ss_pred CCCCCEEEEECC-CCCCCHHHHHHHHHHcCCEEEEEeeecccCCCccCceecccCCHHHHHHHHH-hcCCcccccchhhh
Confidence 344579999999 889999999999999999999987 36899999999999999998 56777788888777
Q ss_pred EeecC
Q 030175 76 YALKD 80 (182)
Q Consensus 76 ~a~~~ 80 (182)
.....
T Consensus 81 ~~~~~ 85 (183)
T d1u1qa_ 81 RAVSR 85 (183)
T ss_dssp ECCCT
T ss_pred hhhhc
Confidence 66543
No 88
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.27 E-value=5.4e-07 Score=57.94 Aligned_cols=71 Identities=20% Similarity=0.285 Sum_probs=57.5
Q ss_pred CCCCCEEEEccCCCCCC------C---HHHHHHhhccCCceEEEEEeCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEE
Q 030175 4 QRPTKTLFVINFDPIRT------R---ERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISV 74 (182)
Q Consensus 4 ~~~~~~l~V~nL~p~~~------~---e~~L~~~F~~~G~i~~~~i~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V 74 (182)
-+|.-+|.|.=+ .... . ..+|.+.|..||+|.-|.+..+-..|+|.+-+.|-+|++ |+|.+++|+.|+|
T Consensus 12 GPpDgTIvV~i~-~~s~e~~~~FDe~l~~~Llq~l~~~GeViLvRFv~d~mwVTF~dG~SAL~al~-l~g~~v~G~~l~I 89 (95)
T d1ufwa_ 12 GPLDATVVVNLQ-SPTLEEKNEFPEDLRTELMQTLGSYGTIVLVRINQGQMLVTFADSHSALSVLD-VDGMKVKGRAVKI 89 (95)
T ss_dssp CCTTCEEEEEES-SCCHHHHHSCCHHHHHHHHHHHHHHSCCSEEEEETTEEEEECSCSHHHHHHHH-GGGSEETTEEEEE
T ss_pred CCCCcEEEEEec-cCCccccccCCHHHHHHHHHHHhhCCeEEEEEEeCCeEEEEECCcHHHHHHhc-cCCeEEcceEEEE
Confidence 356667777433 1111 1 246889999999999999999999999999999999997 8999999999998
Q ss_pred EE
Q 030175 75 EY 76 (182)
Q Consensus 75 ~~ 76 (182)
..
T Consensus 90 t~ 91 (95)
T d1ufwa_ 90 SG 91 (95)
T ss_dssp EC
T ss_pred ec
Confidence 65
No 89
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.02 E-value=7.7e-06 Score=49.94 Aligned_cols=56 Identities=29% Similarity=0.318 Sum_probs=50.2
Q ss_pred HHHHHhhccCCceEEEEEe-----CCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEee
Q 030175 23 RDIKRHFEPYGNVLHVRIR-----RNFAFVQFETQEEATKALESTDRSKLVDRVISVEYAL 78 (182)
Q Consensus 23 ~~L~~~F~~~G~i~~~~i~-----~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a~ 78 (182)
+.|..+|.+++.|..+.|. .-.|-|...+.++|+.|+..||-.+|+++.|.|.++.
T Consensus 11 q~L~~~f~~h~~V~sv~l~~~~dg~~~A~V~v~~~q~A~~~v~~LhR~KiG~KRI~Vs~~~ 71 (73)
T d2dgxa1 11 QLLQEAFARHGKVKSVELSPHTDYQLKAVVQMENLQDAIGAVNSLHRYKIGSKKILVSLAT 71 (73)
T ss_dssp HHHHHHHHHHSCEEEEEECSCCSTTCCEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred HHHHHHHHhheeEEEEEEEeccCCcEEEEEEcCCHHHHHHHHHHHHHHhcCCeEEEEEEec
Confidence 4577889999999999982 3479999999999999999999999999999999975
No 90
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.74 E-value=9e-05 Score=47.70 Aligned_cols=70 Identities=17% Similarity=0.268 Sum_probs=57.1
Q ss_pred CEEEEccCCCCCCCHHHHHHhhccCCceEEEEEe----------CCEEEEEeCCHHHHHHHHHhcCCCccCC---c--EE
Q 030175 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR----------RNFAFVQFETQEEATKALESTDRSKLVD---R--VI 72 (182)
Q Consensus 8 ~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i~----------~g~afV~f~~~~~a~~Ai~~l~g~~~~g---~--~l 72 (182)
++|.|..| |.++||+++.+.+...|++...... -.-|+|.|.+.+++....+.++|+.|.+ . .-
T Consensus 2 tKvVvRrL-PP~Lte~~F~~~l~~~~~~d~~~f~~Gk~s~~~~~~SRAYi~F~~~~~v~~F~~~f~g~~F~D~~g~~~~a 80 (91)
T d1uw4a_ 2 SKVVIRRL-PPTLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFLDNKGQEYPA 80 (91)
T ss_dssp CEEEEEEE-CTTCCHHHHHHHHCSCCCEEEEEEEESCCSSTTCCCEEEEEEESSSHHHHHHHHHHTTCEEECTTCCEEEC
T ss_pred ceEEEecC-CCCCCHHHHHHHhCCcCceEEEEEeCCCcCCCCCcceEEEEEeCCHHHHHHHHHHcCCcEEEcCCCCEeee
Confidence 57999999 7799999999999999888776652 2369999999999999999999998832 2 34
Q ss_pred EEEEee
Q 030175 73 SVEYAL 78 (182)
Q Consensus 73 ~V~~a~ 78 (182)
.|++|.
T Consensus 81 ~VE~AP 86 (91)
T d1uw4a_ 81 IVEFAP 86 (91)
T ss_dssp EEEECS
T ss_pred EEEEcC
Confidence 566664
No 91
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.19 E-value=0.00079 Score=43.45 Aligned_cols=58 Identities=21% Similarity=0.394 Sum_probs=50.1
Q ss_pred CCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEEeCCEEEEEeCCHHHHHHHHHhcC
Q 030175 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTD 63 (182)
Q Consensus 5 ~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i~~g~afV~f~~~~~a~~Ai~~l~ 63 (182)
+.-..||.-.+ |......||.++|+.||.|.-..|..--|||...+.++|+.+++.+.
T Consensus 13 p~RdHVf~~tF-P~~Wk~~dI~~lFSpfG~V~VswIddTSa~V~L~~~e~~~~v~~~~~ 70 (100)
T d1whva_ 13 PKRDHVLHVTF-PKEWKTSDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVQIAVNTSK 70 (100)
T ss_dssp CCCCSEEEEEC-CTTCCHHHHHHHHTTTCSCCCEEEETTEEEEECSCHHHHHHHHHHHH
T ss_pred CCcceeEEEeC-CcccchhHHHHHhcCCCceEEEEecCceEEEEecCHHHHHHHHHHhc
Confidence 34456888899 88999999999999999988888888899999999999999887554
No 92
>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}
Probab=84.83 E-value=1.7 Score=25.14 Aligned_cols=60 Identities=8% Similarity=0.125 Sum_probs=44.3
Q ss_pred CCCCCCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--eCCEEEEEeC----CHHHHHHHHHhc
Q 030175 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--RRNFAFVQFE----TQEEATKALEST 62 (182)
Q Consensus 2 ~~~~~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--~~g~afV~f~----~~~~a~~Ai~~l 62 (182)
......-+|.|.|+ ....-...|++.|.+.-.|..+.+ ..+-+.|.|. +.++..++|+.+
T Consensus 2 ~s~~~~~~l~V~Gm-~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~d~~~~~~~~i~~~i~~~ 67 (72)
T d1p6ta1 2 LSEQKEIAMQVSGM-TCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKL 67 (72)
T ss_dssp CCCCEEEEEEEESC-CSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHH
T ss_pred CCCceEEEEEECCe-ecHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHHh
Confidence 34455667889999 445556789999999888888776 5788999985 356667777654
No 93
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]}
Probab=80.17 E-value=1.6 Score=28.06 Aligned_cols=39 Identities=23% Similarity=0.413 Sum_probs=29.2
Q ss_pred HHHHHhhccCCceEEEEE--eCCEEEEEeCCHHHHHHHHHhcCC
Q 030175 23 RDIKRHFEPYGNVLHVRI--RRNFAFVQFETQEEATKALESTDR 64 (182)
Q Consensus 23 ~~L~~~F~~~G~i~~~~i--~~g~afV~f~~~~~a~~Ai~~l~g 64 (182)
.+|.+.+..+|. +.| .-..+|+.|++.++|++|++.|..
T Consensus 60 ~~~~~~L~~~g~---~~MSGSGstvF~~f~~~~~a~~~~~~l~~ 100 (120)
T d1oj4a2 60 DAVLSWLLEYAP---SRLTGTGACVFAEFDTESEARQVLEQAPE 100 (120)
T ss_dssp HHHHHHHTTTSC---EEECTTSSCEEEEESSHHHHHHHHHHSCG
T ss_pred HHHHHHHhhccc---ceecCCCCEEEEEeCCHHHHHHHHHHcCc
Confidence 345666777775 345 244889999999999999998854
No 94
>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.35 E-value=3.2 Score=24.35 Aligned_cols=55 Identities=15% Similarity=0.260 Sum_probs=41.2
Q ss_pred CCEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--eCCEEEEEeC----CHHHHHHHHHhc
Q 030175 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--RRNFAFVQFE----TQEEATKALEST 62 (182)
Q Consensus 7 ~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--~~g~afV~f~----~~~~a~~Ai~~l 62 (182)
.-+|.|.|+ ....-...|+..|.+.-.|..+.+ ..+-+.|+|. +.++..++|+.+
T Consensus 9 ~~~l~V~gm-~C~~C~~~ie~~l~~~~gv~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~ 69 (79)
T d1kvja_ 9 SVTISVEGM-TCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDM 69 (79)
T ss_dssp EEEEEEESC-CSTHHHHHHHHHHHTTTTCSEEEEETTTTEEEEEECTTTCCHHHHHHHHHHH
T ss_pred EEEEEECCe-ecHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHHhc
Confidence 347888999 455556789999999877777765 6788999985 567777777764
No 95
>d1ueka2 d.58.26.5 (A:149-268) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Thermus thermophilus [TaxId: 274]}
Probab=74.52 E-value=2.7 Score=26.69 Aligned_cols=42 Identities=17% Similarity=0.158 Sum_probs=31.2
Q ss_pred HHHHHhhccCCceEEEEE--eCCEEEEEeCCHHHHHHHHHhcCCC
Q 030175 23 RDIKRHFEPYGNVLHVRI--RRNFAFVQFETQEEATKALESTDRS 65 (182)
Q Consensus 23 ~~L~~~F~~~G~i~~~~i--~~g~afV~f~~~~~a~~Ai~~l~g~ 65 (182)
.+|++.+..+|.+. +.| .-..+|..|.+.++|++|.+.|...
T Consensus 66 ~~~~~~l~~~g~~~-~~mSGSGst~F~l~~~~~~a~~~~~~l~~~ 109 (120)
T d1ueka2 66 KEVRGRMRALGLRG-VLMSGSGSAFFGLAEGPDHARRAAEALRAW 109 (120)
T ss_dssp HHHHHHHHHTTCEE-EEECTTSSCEEEECSSHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhhhhh-eeecCCCCeEEEEeCCHHHHHHHHHHHHHh
Confidence 45666677777533 455 3457999999999999999988654
No 96
>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=72.04 E-value=3.6 Score=23.65 Aligned_cols=53 Identities=17% Similarity=0.216 Sum_probs=39.6
Q ss_pred EEEEccCCCCCCCHHHHHHhhccCCceEEEEE--eCCEEEEEeC---CHHHHHHHHHhc
Q 030175 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--RRNFAFVQFE---TQEEATKALEST 62 (182)
Q Consensus 9 ~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--~~g~afV~f~---~~~~a~~Ai~~l 62 (182)
+|-|.|+ ....-...|+..+.+...|..+.+ ..+-+.|+|. +.++..++|+.+
T Consensus 5 ~l~V~GM-~C~~C~~~Ie~~l~~~~gV~~v~V~~~~~~~~v~~~~~~~~~~i~~~i~~~ 62 (72)
T d2ggpb1 5 ILAVHGM-TCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDC 62 (72)
T ss_dssp EEECTTC-CSSTTTHHHHHHHTTSTTEEEEEECTTTCEEEEEECSSCCHHHHHHHHHHT
T ss_pred EEEECCc-ccHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCHHHHHHHHHHh
Confidence 5778888 455566789999999888888777 5788999987 445666666653
No 97
>d2f06a2 d.58.18.11 (A:1-70) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=68.18 E-value=8.4 Score=22.13 Aligned_cols=54 Identities=19% Similarity=0.262 Sum_probs=37.9
Q ss_pred EEEEccCCCCCCCHHHHHHhhccCC-ceEEEEE--eCCEEE--EEeCCHHHHHHHHHhcCCCc
Q 030175 9 TLFVINFDPIRTRERDIKRHFEPYG-NVLHVRI--RRNFAF--VQFETQEEATKALESTDRSK 66 (182)
Q Consensus 9 ~l~V~nL~p~~~~e~~L~~~F~~~G-~i~~~~i--~~g~af--V~f~~~~~a~~Ai~~l~g~~ 66 (182)
.|||.|- | -.-.+|-.+|.+.| .|..+.+ ...+++ +...+++.|.+.|+. +|..
T Consensus 7 sV~~eNk-p--G~L~~v~~~~~~~~inI~sl~v~~t~~~~i~Riiv~~~e~a~~~L~~-~g~~ 65 (70)
T d2f06a2 7 SIFLENK-S--GRLTEVTEVLAKENINLSALCIAENADFGILRGIVSDPDKAYKALKD-NHFA 65 (70)
T ss_dssp EEEECSS-S--SHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEESCHHHHHHHHHH-TTCC
T ss_pred EEEEeCC-C--cHHHHHHHHHHHCCCCEEEEEEeecCCCCEEEEEECChHHHHHHHHH-CCCE
Confidence 5788887 5 34678899999988 7777766 233333 456788888888875 5554
No 98
>d1sc6a3 d.58.18.1 (A:327-410) Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain {Escherichia coli [TaxId: 562]}
Probab=66.49 E-value=8.8 Score=22.63 Aligned_cols=58 Identities=16% Similarity=0.275 Sum_probs=36.0
Q ss_pred CCCEEEEccCCCCCCCHHHHHHhhccCC-ceEEEEEe----CCEEEEEeCC-H---HHHHHHHHhcCC
Q 030175 6 PTKTLFVINFDPIRTRERDIKRHFEPYG-NVLHVRIR----RNFAFVQFET-Q---EEATKALESTDR 64 (182)
Q Consensus 6 ~~~~l~V~nL~p~~~~e~~L~~~F~~~G-~i~~~~i~----~g~afV~f~~-~---~~a~~Ai~~l~g 64 (182)
....|.|-|-|. .--...+-.+|.+.| +|..+.+. .+++++.++. . +++.++|.++.+
T Consensus 10 ~~~rl~i~~~d~-PGvla~I~~~l~~~~iNI~~~~~~~~~~~~~a~~~i~~D~~~~~~v~~~i~~l~~ 76 (84)
T d1sc6a3 10 GGRRLMHIHENR-PGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDIEADEDVAEKALQAMKAIPG 76 (84)
T ss_dssp SSEEEEEEEESC-TTHHHHHHHHHHHTTCEEEEEEEEECSSEEEEEEEEECCHHHHHHHHHHHHTSTT
T ss_pred CCeEEEEEeCCc-CCHHHHHHHHHHHcCCCHHHhccccCCCCcEEEEEEECCCCCHHHHHHHHHCCCC
Confidence 445777766642 234678889999887 78777662 3678877753 2 334444555444
No 99
>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]}
Probab=64.13 E-value=9.6 Score=21.37 Aligned_cols=57 Identities=18% Similarity=0.214 Sum_probs=41.4
Q ss_pred CEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--eCCEEEEEeC----CHHHHHHHHHhcCCCc
Q 030175 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--RRNFAFVQFE----TQEEATKALESTDRSK 66 (182)
Q Consensus 8 ~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--~~g~afV~f~----~~~~a~~Ai~~l~g~~ 66 (182)
.+|.|.|+ ....-...|+..|.+.-.|..+.+ ..+-+.|+|. +.++..++|+.+ |..
T Consensus 4 ~tl~V~Gm-~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~-Gy~ 66 (69)
T d2qifa1 4 KTLQVEGM-SCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQ-GYD 66 (69)
T ss_dssp EEEEEECC-CSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHT-TCE
T ss_pred EEEEECCc-cCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHHHh-CCc
Confidence 46888888 444445779999998877887776 5788999985 456677777764 443
No 100
>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=61.67 E-value=9.4 Score=21.73 Aligned_cols=54 Identities=13% Similarity=0.170 Sum_probs=38.5
Q ss_pred CEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--eCCEEEEEeCCH--HHHHHHHHhc
Q 030175 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--RRNFAFVQFETQ--EEATKALEST 62 (182)
Q Consensus 8 ~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--~~g~afV~f~~~--~~a~~Ai~~l 62 (182)
.++.|.|| ....-...|++.|.+.-.|..+.+ ..+.+.|+|... ++..++|..+
T Consensus 5 ~~~~V~Gm-~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~i~~~i~~~ 62 (73)
T d1mwza_ 5 YSWKVSGM-DCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKA 62 (73)
T ss_dssp EEEECTTC-CSHHHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHH
T ss_pred EEEEECCc-CCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCHHHHHHHHHHc
Confidence 45778888 344446789999999888888777 578899998643 4555666654
No 101
>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}
Probab=60.46 E-value=13 Score=21.49 Aligned_cols=52 Identities=8% Similarity=0.174 Sum_probs=39.3
Q ss_pred EEEEccCCCCCCCHHHHHHhhccCCceEEEEE--eCCEEEEEeC----CHHHHHHHHHh
Q 030175 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--RRNFAFVQFE----TQEEATKALES 61 (182)
Q Consensus 9 ~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--~~g~afV~f~----~~~~a~~Ai~~ 61 (182)
.+.|.|| ....-...|+..|...-.|..+.+ ..+-+.|+|. +.++..++|+.
T Consensus 5 ~~~V~Gm-~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~~ 62 (79)
T d1p6ta2 5 EFDIEGM-TCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDK 62 (79)
T ss_dssp EEEESSC-CSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHH
T ss_pred EEEECCc-ccHHHHHHHHHHHhcCCCcEEEEEEeCCCEEEEEECCCCCCHHHHHHHHHH
Confidence 5778898 455667889999999877877666 6888999985 44666666665
No 102
>d2f06a1 d.58.18.11 (A:71-141) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=58.41 E-value=13 Score=21.12 Aligned_cols=54 Identities=15% Similarity=0.159 Sum_probs=35.5
Q ss_pred EEEccCCCCCCCHHHHHHhhccCC-ceEEEEE--eCCEEEE--EeCCHHHHHHHHHhcCCCcc
Q 030175 10 LFVINFDPIRTRERDIKRHFEPYG-NVLHVRI--RRNFAFV--QFETQEEATKALESTDRSKL 67 (182)
Q Consensus 10 l~V~nL~p~~~~e~~L~~~F~~~G-~i~~~~i--~~g~afV--~f~~~~~a~~Ai~~l~g~~~ 67 (182)
|+|.|- | -.-..+..+|.+.| .|..+.+ ..++|++ .+++.+.|.++|+. +|..+
T Consensus 4 V~v~d~-p--G~L~~v~~~L~~~~InI~~~y~~~~~~~~~~vl~vdd~~~a~~~L~~-~G~~v 62 (71)
T d2f06a1 4 ISCPNV-P--GALAKVLGFLSAEGVFIEYMYSFANNNVANVVIRPSNMDKCIEVLKE-KKVDL 62 (71)
T ss_dssp EEEESS-T--THHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEESCHHHHHHHHHH-TTCEE
T ss_pred EEecCC-c--cHHHHHHHHHHHCCCCEEEEEEEcCCCcEEEEEEECCHHHHHHHHHH-CCCEE
Confidence 555555 3 24566888888887 6766554 4566654 45688888888875 66544
No 103
>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=57.64 E-value=8.6 Score=21.78 Aligned_cols=54 Identities=13% Similarity=0.193 Sum_probs=39.2
Q ss_pred CEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--eCCEEEEEeC----CHHHHHHHHHhc
Q 030175 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--RRNFAFVQFE----TQEEATKALEST 62 (182)
Q Consensus 8 ~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--~~g~afV~f~----~~~~a~~Ai~~l 62 (182)
.+|.|.|+ ....-...|+..|.+.-.|..+.+ ..+-+.|+|. +.++..++|+.+
T Consensus 5 ~~l~V~GM-~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~ 64 (72)
T d2aw0a_ 5 TVINIDGM-TCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDM 64 (72)
T ss_dssp EEEEEECC-CSHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHH
T ss_pred EEEEECCc-ccHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHhh
Confidence 46778888 444456778999988876776655 6889999984 556667777754
No 104
>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]}
Probab=53.75 E-value=15 Score=20.39 Aligned_cols=53 Identities=17% Similarity=0.269 Sum_probs=39.5
Q ss_pred CEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--eCCEEEEEeC----CHHHHHHHHHh
Q 030175 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--RRNFAFVQFE----TQEEATKALES 61 (182)
Q Consensus 8 ~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--~~g~afV~f~----~~~~a~~Ai~~ 61 (182)
..+.|.|+ ....-...|+..|.+.-.|..+.+ ..+.+-|+|. +.++..++|+.
T Consensus 2 ~el~V~GM-~C~~C~~~Ie~~l~~~~GV~~v~V~~~~~~v~v~~d~~~~~~~~i~~~i~~ 60 (68)
T d1cpza_ 2 QEFSVKGM-SCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINE 60 (68)
T ss_dssp CEEEESCC-CSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHT
T ss_pred cEEEECCe-EcHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHh
Confidence 45788888 455556789999999877887776 5788999985 44556666664
No 105
>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]}
Probab=53.07 E-value=16 Score=20.52 Aligned_cols=52 Identities=23% Similarity=0.240 Sum_probs=38.5
Q ss_pred EEEEccCCCCCCCHHHHHHhhccCCceEEEEE--eCCEEEEEeCC----HHHHHHHHHh
Q 030175 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--RRNFAFVQFET----QEEATKALES 61 (182)
Q Consensus 9 ~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--~~g~afV~f~~----~~~a~~Ai~~ 61 (182)
+|.|.|+ ....-...|+..|...-.|..+.+ ..+-+.|+|.. .++..++|+.
T Consensus 6 ~l~V~Gm-~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~~ 63 (72)
T d1osda_ 6 TLSVPGM-TCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATAD 63 (72)
T ss_dssp EEECTTC-CSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHH
T ss_pred EEEECCc-ccHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHh
Confidence 4667888 455556789999999887887776 57888888853 5666677765
No 106
>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]}
Probab=52.77 E-value=14 Score=20.39 Aligned_cols=52 Identities=12% Similarity=0.115 Sum_probs=35.1
Q ss_pred EEEEccCCCCCCCHHHHHHhhccCCceEEEEE--eCCEEEEEeC-CHHHHHHHHHh
Q 030175 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--RRNFAFVQFE-TQEEATKALES 61 (182)
Q Consensus 9 ~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--~~g~afV~f~-~~~~a~~Ai~~ 61 (182)
+|.|.|+ ....-...|+..+.+...|..+.+ ..+.+.|++. +.++..+||+.
T Consensus 4 ~l~V~gM-~C~~C~~~Ie~~l~~~~gv~~v~v~~~~~~v~v~~~~~~~~i~~~i~~ 58 (64)
T d1sb6a_ 4 QLTVPTI-ACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIAS 58 (64)
T ss_dssp EEECTTT-TSSSCTHHHHHHHHHHCTTCEEEEETTTTEEEEESSSCHHHHHHHHHH
T ss_pred EEEECCc-cchhHHHHHHHHHhcCCCeeEEEccCCCCEEEEccCCCHHHHHHHHHH
Confidence 5778888 455556778888887766777666 5677777765 44555566654
No 107
>d2qmwa2 d.58.18.3 (A:185-264) Prephenate dehydratase C-terminal domain {Staphylococcus aureus [TaxId: 1280]}
Probab=52.57 E-value=13 Score=21.72 Aligned_cols=46 Identities=13% Similarity=0.205 Sum_probs=29.6
Q ss_pred CCHHHHHHhhccCC-ceEEEEE-e-----CCEE-EEEeC--CHHHHHHHHHhcCCC
Q 030175 20 TRERDIKRHFEPYG-NVLHVRI-R-----RNFA-FVQFE--TQEEATKALESTDRS 65 (182)
Q Consensus 20 ~~e~~L~~~F~~~G-~i~~~~i-~-----~g~a-fV~f~--~~~~a~~Ai~~l~g~ 65 (182)
-.-.++..+|+++| +++.|.- + ..|. ||+|+ ..+..++|++.|...
T Consensus 14 GaL~~vL~~F~~~~INLt~IeSRP~~~~~~~Y~F~id~~g~~~~~~~~~l~~L~~~ 69 (80)
T d2qmwa2 14 GLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQADSAITTDIKKVIAILETL 69 (80)
T ss_dssp THHHHHHHHHHTTTCCEEEEEEEECSSSTTCEEEEEEESCCSCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHCCCCEEEEEeeecCCCCceEEEEEEEecCCcHHHHHHHHHHHHh
Confidence 34578889999998 5666643 1 2355 48884 335567787776543
No 108
>d1sfea2 c.55.7.1 (A:12-92) Ada DNA repair protein {Escherichia coli [TaxId: 562]}
Probab=49.62 E-value=12 Score=21.60 Aligned_cols=21 Identities=14% Similarity=0.232 Sum_probs=15.4
Q ss_pred cCCceEEEEEeCCEEEEEeCC
Q 030175 31 PYGNVLHVRIRRNFAFVQFET 51 (182)
Q Consensus 31 ~~G~i~~~~i~~g~afV~f~~ 51 (182)
.+|.|.-+.-.+|.|+|.|.+
T Consensus 11 plG~llvaat~~Glc~i~F~d 31 (81)
T d1sfea2 11 ELGRCLVAESERGICAILLGD 31 (81)
T ss_dssp TTEEEEEEECSSSEEEEEEES
T ss_pred CceeEEEEEcCCcEEEEEEec
Confidence 466655555579999999965
No 109
>d1qyra_ c.66.1.24 (A:) High level kasugamycin resistance protein KsgA {Escherichia coli [TaxId: 562]}
Probab=47.03 E-value=8.5 Score=27.82 Aligned_cols=45 Identities=9% Similarity=0.050 Sum_probs=30.0
Q ss_pred CCEEEEccCCCCCCCHHHHHHhhccCCceEEEEEeCCEEEEEeCCHHHHHHHHH
Q 030175 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALE 60 (182)
Q Consensus 7 ~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i~~g~afV~f~~~~~a~~Ai~ 60 (182)
....+|||| |++++..-|..++.....+..+. -+-..|-|++.+.
T Consensus 90 ~~~~vvgNl-PY~Iss~Il~~l~~~~~~~~~~~--------~m~QkEvA~Ri~A 134 (252)
T d1qyra_ 90 QPLRVFGNL-PYNISTPLMFHLFSYTDAIADMH--------FMLQKEVVNRLVA 134 (252)
T ss_dssp SCEEEEEEC-CTTTHHHHHHHHHTTGGGEEEEE--------EEEEHHHHHHHHC
T ss_pred CCeEEEecc-hHHHHHHHHHHhcccccceehhh--------hhhhHHHHHHhcc
Confidence 346788999 99999998888776554444432 2334666666554
No 110
>d1clia2 d.139.1.1 (A:171-345) Aminoimidazole ribonucleotide synthetase (PurM) C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=46.53 E-value=0.98 Score=31.46 Aligned_cols=42 Identities=19% Similarity=0.241 Sum_probs=31.7
Q ss_pred HHHHhhccCCceEEEEE----eCCEEEEEeCCHHHHHHHHHhcCCC
Q 030175 24 DIKRHFEPYGNVLHVRI----RRNFAFVQFETQEEATKALESTDRS 65 (182)
Q Consensus 24 ~L~~~F~~~G~i~~~~i----~~g~afV~f~~~~~a~~Ai~~l~g~ 65 (182)
.|.+++++.|.|..-.| +.|.+||.+-+.++|+++++.|+..
T Consensus 108 ~iF~~i~~~g~vs~~EM~~tFNmGIGmvliV~~~~~~~v~~~l~~~ 153 (175)
T d1clia2 108 EVFNWLQTAGNVEHHEMYRTFNCGVGMIIALPAPEVDKALALLNAN 153 (175)
T ss_dssp HHHHHHHHHHTCCHHHHHHHCCTTEEEEEEECGGGHHHHHHHHHTT
T ss_pred hHHHHHHHhCCccHhhHhheecCcceEEEEECHHHHHHHHHHHHHc
Confidence 56666667776665544 6899999999999999988877654
No 111
>d2cyya2 d.58.4.2 (A:65-150) Putative transcriptional regulator PH1519 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=44.82 E-value=25 Score=20.20 Aligned_cols=44 Identities=11% Similarity=0.215 Sum_probs=36.8
Q ss_pred CCHHHHHHhhccCCceEEEEEeCC----EEEEEeCCHHHHHHHHHhcC
Q 030175 20 TRERDIKRHFEPYGNVLHVRIRRN----FAFVQFETQEEATKALESTD 63 (182)
Q Consensus 20 ~~e~~L~~~F~~~G~i~~~~i~~g----~afV~f~~~~~a~~Ai~~l~ 63 (182)
-..+++.+.+.++-+|..|....| ++.|.+.+.++.++.+..|.
T Consensus 14 ~~~~~v~~~l~~~peV~~~~~~tG~~D~~~~v~~~~~~~l~~~~~~l~ 61 (86)
T d2cyya2 14 GKYSEVASNLAKYPEIVEVYETTGDYDMVVKIRTKNSEELNNFLDLIG 61 (86)
T ss_dssp TCHHHHHHHHHTCTTEEEEEECSSSSSEEEEEEESSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCeEEEEEEcCCCCEEEEEEECCHHHHHHHHHHHh
Confidence 357788999999999999988655 68899999999998887654
No 112
>d2cfxa2 d.58.4.2 (A:64-140) Transcriptional regulator LrpC {Bacillus subtilis [TaxId: 1423]}
Probab=44.40 E-value=24 Score=19.93 Aligned_cols=46 Identities=11% Similarity=0.044 Sum_probs=38.5
Q ss_pred CCHHHHHHhhccCCceEEEEEeCC----EEEEEeCCHHHHHHHHHhcCCC
Q 030175 20 TRERDIKRHFEPYGNVLHVRIRRN----FAFVQFETQEEATKALESTDRS 65 (182)
Q Consensus 20 ~~e~~L~~~F~~~G~i~~~~i~~g----~afV~f~~~~~a~~Ai~~l~g~ 65 (182)
...+++.+.+.++-+|.+|....| +..|.+.+.++.+..|..|.+.
T Consensus 13 ~~~~~~~~~i~~~peV~e~~~vtG~~D~il~v~~~d~~~l~~~i~~l~~v 62 (77)
T d2cfxa2 13 ADYERFKSYIQTLPNIEFCYRIAGAACYMLKINAESLEAVEDFINKTSPY 62 (77)
T ss_dssp GCHHHHHHHHHTCTTEEEEEEEESSSSEEEEEEESSHHHHHHHHHHHTTT
T ss_pred CCHHHHHHHHhcCchheEEEEEcCCCCEEEEEEECCHHHHHHHHhhCCCc
Confidence 357889999999999999988544 5778999999999999888764
No 113
>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.30 E-value=33 Score=19.81 Aligned_cols=53 Identities=15% Similarity=0.231 Sum_probs=38.9
Q ss_pred CEEEEccCCCCCCCHHHHHHhhccCCceEEEEE--eCCEEEEEeC----CHHHHHHHHHh
Q 030175 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--RRNFAFVQFE----TQEEATKALES 61 (182)
Q Consensus 8 ~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--~~g~afV~f~----~~~~a~~Ai~~ 61 (182)
-+|.|.++ ....-...|+..|...-.|..+.+ ..+-+-|.|. +.+...++|+.
T Consensus 11 v~l~V~GM-tC~~C~~~Ie~~l~~~~GV~~v~vn~~~~~v~v~~~~~~~~~~~i~~~I~~ 69 (84)
T d1q8la_ 11 LKMKVEGM-TCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEA 69 (84)
T ss_dssp EEEEECCT-TTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHH
T ss_pred EEEEECCe-EcHHHHHHHHHHHhcCCCceEEEEECCCCEEceeecccccCHHHHHHHHHH
Confidence 35778888 455666789999998877888877 5677888777 34566677765
No 114
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]}
Probab=36.72 E-value=38 Score=24.94 Aligned_cols=46 Identities=17% Similarity=0.205 Sum_probs=32.9
Q ss_pred CCCCCCCHHHHHHhhccCCceEEEEEeCCEEEEEeCCHHHHHHHHH
Q 030175 15 FDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALE 60 (182)
Q Consensus 15 L~p~~~~e~~L~~~F~~~G~i~~~~i~~g~afV~f~~~~~a~~Ai~ 60 (182)
|||+.++--...+-+.++|+|..+.+.-+..++.....+++..+++
T Consensus 5 ~~~~~~~~~~~~~~lR~~GPv~~~~~~g~~~~~vvt~~~~v~~vl~ 50 (403)
T d1gwia_ 5 LDPFVTDLDGESARLRAAGPLAAVELPGGVPVWAVTHHAEAKALLT 50 (403)
T ss_dssp CCTTCSCHHHHHHHHHHTCSEEEEEETTTEEEEEECSHHHHHHHHT
T ss_pred CCCCccCchHHHHHHHhcCCEEEEEeCCCceEEEeCCHHHHHHHhc
Confidence 4565555443334447789999998877777777788999888875
No 115
>d1yuba_ c.66.1.24 (A:) rRNA adenine dimethylase {Streptococcus pneumoniae, Ermam [TaxId: 1313]}
Probab=36.62 E-value=19 Score=25.64 Aligned_cols=25 Identities=20% Similarity=0.118 Sum_probs=20.3
Q ss_pred CCEEEEccCCCCCCCHHHHHHhhccC
Q 030175 7 TKTLFVINFDPIRTRERDIKRHFEPY 32 (182)
Q Consensus 7 ~~~l~V~nL~p~~~~e~~L~~~F~~~ 32 (182)
...++|+|| |++++..-|..++...
T Consensus 93 ~~~~vv~NL-PY~Ist~il~~~l~~~ 117 (245)
T d1yuba_ 93 QRYKIVGNI-PYHLSTQIIKKVVFES 117 (245)
T ss_dssp SEEEEEEEC-CSSSCHHHHHHHHHHC
T ss_pred eeeeEeeee-ehhhhHHHHHHHhhhc
Confidence 345689999 9999999998887553
No 116
>d1m6ya1 a.60.13.1 (A:115-215) Putative methyltransferase TM0872, insert domain {Thermotoga maritima [TaxId: 2336]}
Probab=36.44 E-value=6.8 Score=24.31 Aligned_cols=18 Identities=22% Similarity=0.329 Sum_probs=15.2
Q ss_pred CCCHHHHHHhhccCCceE
Q 030175 19 RTRERDIKRHFEPYGNVL 36 (182)
Q Consensus 19 ~~~e~~L~~~F~~~G~i~ 36 (182)
..++++|..+|..||+..
T Consensus 30 ~~~~~~L~~Il~~yGee~ 47 (101)
T d1m6ya1 30 ELPEEELARIIFEYGEEK 47 (101)
T ss_dssp HSCHHHHHHHHHHTTCCT
T ss_pred hhhHHHHHHHHHHhccch
Confidence 357899999999999764
No 117
>d1zq9a1 c.66.1.24 (A:36-313) Probable dimethyladenosine transferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.29 E-value=10 Score=27.84 Aligned_cols=30 Identities=13% Similarity=0.012 Sum_probs=21.9
Q ss_pred CCCEEEEccCCCCCCCHHHHHHhhccCCceE
Q 030175 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVL 36 (182)
Q Consensus 6 ~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~ 36 (182)
+.....|+|| |++++..-|..++...-.+.
T Consensus 85 ~~~~~vV~NL-PY~Iss~il~~~~~~~~~~~ 114 (278)
T d1zq9a1 85 PFFDTCVANL-PYQISSPFVFKLLLHRPFFR 114 (278)
T ss_dssp CCCSEEEEEC-CGGGHHHHHHHHHHCSSCCS
T ss_pred hhhhhhhcch-HHHHHHHHHHHHHhhCCccc
Confidence 3445789999 99999888888776543333
No 118
>d1q4ra_ d.58.4.4 (A:) Hypothetical protein AT3G17210.1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=34.90 E-value=41 Score=19.96 Aligned_cols=47 Identities=11% Similarity=0.200 Sum_probs=28.3
Q ss_pred EEEccCCCCCCCHHHHHHhhcc-------CCceEEEEE---------eCCE--E-EEEeCCHHHHHH
Q 030175 10 LFVINFDPIRTRERDIKRHFEP-------YGNVLHVRI---------RRNF--A-FVQFETQEEATK 57 (182)
Q Consensus 10 l~V~nL~p~~~~e~~L~~~F~~-------~G~i~~~~i---------~~g~--a-fV~f~~~~~a~~ 57 (182)
|.+-.| ...++++++.+++.. ...|..+.+ ..+| | +++|++.++.+.
T Consensus 5 iVlfk~-k~~~~~~~~~~~~~~l~~L~~~ip~i~~~~~G~~~~~~~~~~~y~~~l~~~F~s~e~l~~ 70 (103)
T d1q4ra_ 5 VLLASF-KDGVSPEKIEELIKGYANLVNLIEPMKAFHWGKDVSIENLHQGYTHIFESTFESKEAVAE 70 (103)
T ss_dssp EEEEEE-CTTCCHHHHHHHHHHHHTHHHHCTTCCEEEEEECCCSSSCSTTCCEEEEEEESCHHHHHH
T ss_pred EEEEEE-CCCCCHHHHHHHHHHHHHhhhhCceeEEEEeccccCCcccCCCccEEEEEEECCHHHHHH
Confidence 344466 457787765555443 445666665 1344 5 468999887665
No 119
>d1gtda_ d.284.1.1 (A:) PurS subunit of FGAM synthetase {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=34.40 E-value=18 Score=21.38 Aligned_cols=58 Identities=14% Similarity=0.112 Sum_probs=32.2
Q ss_pred EEEEccCCCCCCCH--HHHHHhhccCC-ceEEEEEeCCEEE-EEeCCHHHHHHHHHhcCCCcc
Q 030175 9 TLFVINFDPIRTRE--RDIKRHFEPYG-NVLHVRIRRNFAF-VQFETQEEATKALESTDRSKL 67 (182)
Q Consensus 9 ~l~V~nL~p~~~~e--~~L~~~F~~~G-~i~~~~i~~g~af-V~f~~~~~a~~Ai~~l~g~~~ 67 (182)
.|+|..- |.-++. +.+++.+...| +|..+.+.+-|-| ++-.+.+.|...++.|....|
T Consensus 5 ~V~V~lK-~gVlDPqG~ai~~aL~~lG~~v~~Vr~gK~~~l~i~~~~~e~a~~~v~~~c~~lL 66 (82)
T d1gtda_ 5 EVRIRLK-KGMLNPEAATIERALALLGYEVEDTDTTDVITFTMDEDSLEAVEREVEDMCQRLL 66 (82)
T ss_dssp EEEEEEC-TTSCCHHHHHHHHHHHHHTCCCEEEEEEEEEEEEECCSCHHHHHHHHHHHHHHTT
T ss_pred EEEEEEC-CCCcCcHHHHHHHHHHHcCCCcceEEEEEEEEEEEcCCCHHHHHHHHHHHHHHHc
Confidence 4666544 322222 34444444433 5888888766654 556688877766655544333
No 120
>d1m1ha2 d.58.42.1 (A:5-50,A:132-186) N-utilization substance G protein NusG, N-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=34.14 E-value=37 Score=20.66 Aligned_cols=43 Identities=16% Similarity=0.235 Sum_probs=31.1
Q ss_pred HHHHHhhccCC---ceEEEEEe-----CCEEEEEeCCHHHHHHHHHhcCCC
Q 030175 23 RDIKRHFEPYG---NVLHVRIR-----RNFAFVQFETQEEATKALESTDRS 65 (182)
Q Consensus 23 ~~L~~~F~~~G---~i~~~~i~-----~g~afV~f~~~~~a~~Ai~~l~g~ 65 (182)
+.|+......| .|..+.++ .||.||.+.-.+++..+|....|.
T Consensus 24 ~~l~~~~~~~~l~~~i~~v~VP~~klfPGYvfV~~~~~~~~~~~Ir~t~gV 74 (101)
T d1m1ha2 24 ENLLKVLELEGLKDLVDEVIVPANKIFPGYILIKAHMNDKLLMAIEKTPHV 74 (101)
T ss_dssp HHHHHHHHHTTCGGGEEEEECSSCSSSTTEEEEEECCCHHHHHHHHTSTTE
T ss_pred HHHHHHHHHcCchhhhHHHhccchhcCCCEEEEEEEeCchHHHHHhcCCCE
Confidence 34554444443 46666653 799999999888888899888875
No 121
>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}
Probab=33.98 E-value=7.7 Score=17.36 Aligned_cols=23 Identities=17% Similarity=0.348 Sum_probs=16.6
Q ss_pred eCCEEEEEeCCHHHHHHHHHhcC
Q 030175 41 RRNFAFVQFETQEEATKALESTD 63 (182)
Q Consensus 41 ~~g~afV~f~~~~~a~~Ai~~l~ 63 (182)
+..+||-+|...+...+-++.++
T Consensus 3 pcp~cfkeftrkdnm~ahvkiih 25 (26)
T d2drpa2 3 PCPFCFKEFTRKDNMTAHVKIIH 25 (26)
T ss_dssp ECTTTCCEESCHHHHHHHHHHHT
T ss_pred CCchhhHHhccccCceEEEEEec
Confidence 34678999998888777666543
No 122
>d1ygya3 d.58.18.1 (A:452-529) Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=33.90 E-value=39 Score=19.26 Aligned_cols=58 Identities=12% Similarity=0.125 Sum_probs=37.6
Q ss_pred CCCEEEEccCCCCCCCHHHHHHhhccCC-ceEEEEE----eCCEEEEEeC----CHHHHHHHHHhcCC
Q 030175 6 PTKTLFVINFDPIRTRERDIKRHFEPYG-NVLHVRI----RRNFAFVQFE----TQEEATKALESTDR 64 (182)
Q Consensus 6 ~~~~l~V~nL~p~~~~e~~L~~~F~~~G-~i~~~~i----~~g~afV~f~----~~~~a~~Ai~~l~g 64 (182)
++..|+|-+.|. .---..|-.+|...| +|..+.+ ..+.|++.+. -.+++.++|+++.+
T Consensus 2 eG~~L~i~~~D~-PGvi~~I~~~l~~~~iNI~~m~~~~~~~g~~a~~vi~vD~~~~~~vl~~I~~~~~ 68 (78)
T d1ygya3 2 QGINLIIHYVDR-PGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLDQDVPDDVRTAIAAAVD 68 (78)
T ss_dssp CSEEEEEEESCC-TTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEESSCCCHHHHHHHHHHHT
T ss_pred CceEEEEEeCCc-CCHHHHHHHHHHhcCcChhhheeeecCCCCeEEEEEEcCCCccHHHHHHHHcCCC
Confidence 456788877753 334578889999988 7888776 2455544433 23566667766665
No 123
>d2okqa1 d.58.4.18 (A:1-117) Hypothetical protein YbaA {Shigella flexneri [TaxId: 623]}
Probab=33.64 E-value=39 Score=21.33 Aligned_cols=37 Identities=16% Similarity=0.330 Sum_probs=26.1
Q ss_pred HHHHhhccCCceEEEEE-----e------------------CCEEEEEeCCHHHHHHHHH
Q 030175 24 DIKRHFEPYGNVLHVRI-----R------------------RNFAFVQFETQEEATKALE 60 (182)
Q Consensus 24 ~L~~~F~~~G~i~~~~i-----~------------------~g~afV~f~~~~~a~~Ai~ 60 (182)
...++|..||.+..+.- + --|++|+|.+.+..+++.+
T Consensus 25 ~a~~v~~e~GAl~~vEcwgdDvp~gk~t~F~~av~ak~~EtVvFSwi~wpska~RD~~~~ 84 (117)
T d2okqa1 25 KAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKAEENEEVVFSWIEYPSKEVRDAANQ 84 (117)
T ss_dssp HHHHHHHHTTCSEEEEEEEEECCCCSSCCHHHHTTCCTTEEEEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHhCCeeeeeeecccCCCCcccCHHHHhcCCCCCEEEEEEEEeCCHHHHHHHHH
Confidence 45678999996554432 1 1289999999988877754
No 124
>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=33.34 E-value=37 Score=18.94 Aligned_cols=52 Identities=12% Similarity=0.129 Sum_probs=36.5
Q ss_pred EEEEccCCCCCCCHHHHHHhhccCCceEEEEE--eCCEEEEEeC-CHHHHHHHHHhc
Q 030175 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--RRNFAFVQFE-TQEEATKALEST 62 (182)
Q Consensus 9 ~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i--~~g~afV~f~-~~~~a~~Ai~~l 62 (182)
++-| ++ ....=...|++.+.+...|..+.+ ..+-+.|+.. +.++..++|+.+
T Consensus 9 ~f~V-~M-~C~~C~~~Iek~l~~~~gV~~v~vdl~~~~v~V~~~~~~~~i~~~I~~~ 63 (72)
T d1qupa2 9 TYAI-PM-HCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNC 63 (72)
T ss_dssp EEEC-CC-CSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHT
T ss_pred EEEE-cc-CCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEeeCCHHHHHHHHHHh
Confidence 3444 46 334446789999999988888776 5677888774 667777788764
No 125
>d1vq3a_ d.284.1.1 (A:) PurS subunit of FGAM synthetase {Thermotoga maritima [TaxId: 2336]}
Probab=33.31 E-value=37 Score=20.00 Aligned_cols=60 Identities=18% Similarity=0.194 Sum_probs=35.9
Q ss_pred EEEEccCCCCCCCH--HHHHHhhccCC--ceEEEEEeCCEEE-EEeCCHHHHHHHHHhcCCCccCC
Q 030175 9 TLFVINFDPIRTRE--RDIKRHFEPYG--NVLHVRIRRNFAF-VQFETQEEATKALESTDRSKLVD 69 (182)
Q Consensus 9 ~l~V~nL~p~~~~e--~~L~~~F~~~G--~i~~~~i~~g~af-V~f~~~~~a~~Ai~~l~g~~~~g 69 (182)
+|+|+.- |.-.+. +.+.+.+...| .|..+.+.+-|-| |+-.+.+.|.+.++.|....|.+
T Consensus 11 ~V~V~~K-~gVlDPqG~av~~aL~~lG~~~v~~vr~gK~~~~~i~~~d~e~a~~~v~~~c~~lLaN 75 (86)
T d1vq3a_ 11 AIDVQYR-SNVRDPRGETIERVLREEKGLPVKKLRLGKSIHLEVEAENKEKAYEIVKKACEELLVN 75 (86)
T ss_dssp EEEEEEC-TTSCCHHHHHHHHHHHHTTCCCEEEEEEEEEEEEEEECSSHHHHHHHHHHHHHHTTSC
T ss_pred EEEEEEC-CCCcCcHHHHHHHHHHHcCCCCcceeEEEEEEEEEEccCCHHHHHHHHHHHHHHHcCC
Confidence 5677654 432222 45666666555 6888888766655 34457777777666665544444
No 126
>d2gu3a1 d.17.1.6 (A:99-161) Uncharacterized protein YpmB {Bacillus subtilis [TaxId: 1423]}
Probab=32.33 E-value=25 Score=19.71 Aligned_cols=21 Identities=14% Similarity=0.194 Sum_probs=14.4
Q ss_pred CCHHHHHHhhccCC---ceEEEEE
Q 030175 20 TRERDIKRHFEPYG---NVLHVRI 40 (182)
Q Consensus 20 ~~e~~L~~~F~~~G---~i~~~~i 40 (182)
+++++.+++|.+-. +|..+.|
T Consensus 2 ISe~~a~~~v~~e~~~~ki~~v~L 25 (63)
T d2gu3a1 2 ISEDKAAKIIKDEGLVSKQKEVHL 25 (63)
T ss_dssp CCHHHHHHHHHHTTCCSEEEEEEE
T ss_pred CCHHHHHHHHHhhcCcceeeEEee
Confidence 67888888887644 4556665
No 127
>d1i4wa_ c.66.1.24 (A:) Transcription factor sc-mtTFB {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=32.11 E-value=14 Score=27.49 Aligned_cols=21 Identities=24% Similarity=0.080 Sum_probs=16.9
Q ss_pred EEEEccCCCCCCCHHHHHHhhc
Q 030175 9 TLFVINFDPIRTRERDIKRHFE 30 (182)
Q Consensus 9 ~l~V~nL~p~~~~e~~L~~~F~ 30 (182)
.++|+|| |++++..-|.+++.
T Consensus 129 ~~vvaNL-Py~iss~il~~~l~ 149 (322)
T d1i4wa_ 129 FLTVANV-TGEGSEGLIMQWLS 149 (322)
T ss_dssp EEEEEEC-CSTTHHHHHHHHHH
T ss_pred eEEEEeC-CchhhHHHHHHHHH
Confidence 4688999 99999887776654
No 128
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]}
Probab=30.72 E-value=57 Score=23.59 Aligned_cols=45 Identities=13% Similarity=0.121 Sum_probs=33.6
Q ss_pred CCCCCCCHHHHHHhhccCCceEEEEEeCCEEEEEeCCHHHHHHHHH
Q 030175 15 FDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALE 60 (182)
Q Consensus 15 L~p~~~~e~~L~~~F~~~G~i~~~~i~~g~afV~f~~~~~a~~Ai~ 60 (182)
|||...+-..+.+.+.+||+|..+.+. |.-+|...+.+.+++++.
T Consensus 4 ~dp~~~d~~~~~~~lr~~Gpv~~~~~~-g~~~vvv~~~~~v~~vl~ 48 (401)
T d1odoa_ 4 LDPTGADHHTEHRTLREGGPATWVDVL-GVQAWSVSDPVLLKQLLT 48 (401)
T ss_dssp CCTTCTTHHHHHHHHHTTCSEEEEEET-TEEEEEECCHHHHHHHTT
T ss_pred cCCCCCChHHHHHHHHhhCCEEEEecC-CceEEEECCHHHHHHHhc
Confidence 456556667777888899999998763 445667888999888763
No 129
>d1g6pa_ b.40.4.5 (A:) Major cold shock protein {Thermotoga maritima [TaxId: 2336]}
Probab=30.50 E-value=13 Score=20.93 Aligned_cols=48 Identities=13% Similarity=0.243 Sum_probs=25.6
Q ss_pred CceEEEEEeCCEEEEEeCCHHHHHHHHHhcC--C-Ccc-CCcEEEEEEeecC
Q 030175 33 GNVLHVRIRRNFAFVQFETQEEATKALESTD--R-SKL-VDRVISVEYALKD 80 (182)
Q Consensus 33 G~i~~~~i~~g~afV~f~~~~~a~~Ai~~l~--g-~~~-~g~~l~V~~a~~~ 80 (182)
|.|+...-.+||+||+-++-+++--=+..|+ + ..| .|..|.+++....
T Consensus 3 G~Vk~f~~~kGfGFI~~~~g~diFvH~s~l~~~g~~~l~~G~~V~f~~~~~~ 54 (66)
T d1g6pa_ 3 GKVKWFDSKKGYGFITKDEGGDVFVHWSAIEMEGFKTLKEGQVVEFEIQEGK 54 (66)
T ss_dssp EEEEEEETTTTEEEEEETTSCBCBBCSSSSCCSSCCCCCSSSEEEEEEECSS
T ss_pred EEEEEEeCCCCeeEEEecCCceEEEEhHHhcccCCCcCCCCCEEEEEEEECC
Confidence 4555555579999999765432110011122 2 122 4777777765543
No 130
>d1wg8a1 a.60.13.1 (A:109-206) Putative methyltransferase TM0872, insert domain {Thermus thermophilus [TaxId: 274]}
Probab=30.42 E-value=5.1 Score=24.84 Aligned_cols=19 Identities=16% Similarity=0.202 Sum_probs=15.8
Q ss_pred CCCHHHHHHhhccCCceEE
Q 030175 19 RTRERDIKRHFEPYGNVLH 37 (182)
Q Consensus 19 ~~~e~~L~~~F~~~G~i~~ 37 (182)
..++++|..+|..||++..
T Consensus 28 ~~~~~eL~~if~~yGee~~ 46 (98)
T d1wg8a1 28 RLPLEALARLLRELGEEPQ 46 (98)
T ss_dssp HSCHHHHHHHHHHHHCCTT
T ss_pred HhhHHHHHHHHHHHhhhHH
Confidence 3578999999999998754
No 131
>d2nptb1 d.15.2.2 (B:42-123) Mitogen-activated protein kinase kinase kinase 2, MEKK 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.34 E-value=38 Score=19.85 Aligned_cols=48 Identities=23% Similarity=0.396 Sum_probs=37.4
Q ss_pred CCCCCHHHHHHhh-ccCCceEEEEEeCCEEEEEeCCHHHHHHHHHhcCC
Q 030175 17 PIRTRERDIKRHF-EPYGNVLHVRIRRNFAFVQFETQEEATKALESTDR 64 (182)
Q Consensus 17 p~~~~e~~L~~~F-~~~G~i~~~~i~~g~afV~f~~~~~a~~Ai~~l~g 64 (182)
+-.+.-++|..-. ..||.-..+...+.--.|-..+.++.++||+.|+.
T Consensus 19 ~RPv~~~dl~~kv~~afGq~ldl~y~n~EL~IPl~~Q~DLDkAvellDr 67 (82)
T d2nptb1 19 PRPVKLEDLRSKAKIAFGQSMDLHYTNNELVIPLTTQDDLDKAVELLDR 67 (82)
T ss_dssp CSSCCHHHHHHHHHHHHTSCEEEEEEETTEEEECCCHHHHHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHHhCCeeeEEEecCeEEEecccHHHHHHHHHHHcc
Confidence 4456777765544 46888888877778888999999999999998754
No 132
>d2c60a1 d.15.2.2 (A:43-122) Mitogen-activated protein kinase kinase kinase 3, MEKK 3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.73 E-value=49 Score=19.22 Aligned_cols=49 Identities=20% Similarity=0.333 Sum_probs=37.3
Q ss_pred CCCCCHHHHHHhh-ccCCceEEEEEeCCEEEEEeCCHHHHHHHHHhcCCC
Q 030175 17 PIRTRERDIKRHF-EPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRS 65 (182)
Q Consensus 17 p~~~~e~~L~~~F-~~~G~i~~~~i~~g~afV~f~~~~~a~~Ai~~l~g~ 65 (182)
+-.+.-++|..-. ..||.-..+...+.--.|-..+.++.++||+.|+..
T Consensus 19 ~RPv~~~dl~~kv~~afGq~ldl~y~n~El~IPl~~Q~DLDkAvellDrs 68 (80)
T d2c60a1 19 SRPVKYEDVEHKVTTVFGQPLDLHYMNNELSILLKNQDDLDKAIDILDRS 68 (80)
T ss_dssp CSSCCHHHHHHHHHHHHSSCCEEEEECSSCEEECCSHHHHHHHHHHHHHC
T ss_pred CCCccHHHHHHHHHHHhCCeeeeEEecCeEEEecccHHHHHHHHHHHccC
Confidence 4456677765544 468888888777788889999999999999987543
No 133
>d1t15a2 c.15.1.3 (A:1758-1859) Breast cancer associated protein, BRCA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.46 E-value=24 Score=20.51 Aligned_cols=28 Identities=7% Similarity=0.113 Sum_probs=21.8
Q ss_pred CCCEEEEcc-CCCCCCCHHHHHHhhccCCce
Q 030175 6 PTKTLFVIN-FDPIRTRERDIKRHFEPYGNV 35 (182)
Q Consensus 6 ~~~~l~V~n-L~p~~~~e~~L~~~F~~~G~i 35 (182)
.+.+|||.+ + + ..+.++|+.+...+|..
T Consensus 5 ~g~~i~~~g~~-~-~~~~~~L~~li~~~GG~ 33 (102)
T d1t15a2 5 RGLEICCYGPF-T-NMPTDQLEWMVQLCGAS 33 (102)
T ss_dssp TTCEEEECSCC-S-SSCHHHHHHHHHHTTCE
T ss_pred CCcEEEEeCCC-C-CcCHHHHHHHHHHhCCE
Confidence 456788876 5 3 57899999999999853
No 134
>d1c9oa_ b.40.4.5 (A:) Major cold shock protein {Bacillus caldolyticus [TaxId: 1394]}
Probab=29.07 E-value=14 Score=20.73 Aligned_cols=48 Identities=15% Similarity=0.269 Sum_probs=25.9
Q ss_pred CceEEEEEeCCEEEEEeCCHHHHHHHHHhcCC---Ccc-CCcEEEEEEeecC
Q 030175 33 GNVLHVRIRRNFAFVQFETQEEATKALESTDR---SKL-VDRVISVEYALKD 80 (182)
Q Consensus 33 G~i~~~~i~~g~afV~f~~~~~a~~Ai~~l~g---~~~-~g~~l~V~~a~~~ 80 (182)
|.|+...-.+||+||+-++-+++---+..|.. ..| .|..|.+.+....
T Consensus 4 G~Vk~fn~~kGfGFI~~d~g~DiF~H~s~l~~~~~~~L~~G~~V~f~~~~~~ 55 (66)
T d1c9oa_ 4 GKVKWFNNEKGYGFIEVEGGSDVFVHFTAIQGEGFKTLEEGQEVSFEIVQGN 55 (66)
T ss_dssp EEEEEEETTTTEEEEEETTEEEEEEEGGGBCSSSCCCCCTTCEEEEEEEEET
T ss_pred eEEEEEECCCCEEEEEecCCceEEEEehhcccccCCcCCCCCEEEEEEEECC
Confidence 55655555799999987643322111122222 233 4777777766543
No 135
>d2od0a1 d.198.5.2 (A:3-105) Hypothetical protein VP1028 {Vibrio parahaemolyticus [TaxId: 670]}
Probab=28.04 E-value=20 Score=21.88 Aligned_cols=18 Identities=22% Similarity=0.447 Sum_probs=14.6
Q ss_pred HHHHHhhccCCceEEEEE
Q 030175 23 RDIKRHFEPYGNVLHVRI 40 (182)
Q Consensus 23 ~~L~~~F~~~G~i~~~~i 40 (182)
+++.++|+..|.|+.-.|
T Consensus 5 ~~~l~ll~~lG~I~~k~M 22 (103)
T d2od0a1 5 KDSMKLFEALGTIKSRSM 22 (103)
T ss_dssp HHHHHHHGGGSCCEEEEE
T ss_pred HHHHHHHhccCCeeEeec
Confidence 556779999999988776
No 136
>d1qama_ c.66.1.24 (A:) rRNA adenine dimethylase {Bacillus subtilis, Ermc' [TaxId: 1423]}
Probab=27.37 E-value=18 Score=25.53 Aligned_cols=23 Identities=13% Similarity=0.037 Sum_probs=18.9
Q ss_pred CEEEEccCCCCCCCHHHHHHhhcc
Q 030175 8 KTLFVINFDPIRTRERDIKRHFEP 31 (182)
Q Consensus 8 ~~l~V~nL~p~~~~e~~L~~~F~~ 31 (182)
...+|+|| |++++..-|..++..
T Consensus 86 ~~~vv~NL-PYnIss~il~~ll~~ 108 (235)
T d1qama_ 86 SYKIFGNI-PYNISTDIIRKIVFD 108 (235)
T ss_dssp CCEEEEEC-CGGGHHHHHHHHHHS
T ss_pred cceeeeee-hhhhhHHHHHHHHhh
Confidence 34679999 999999999888743
No 137
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]}
Probab=26.38 E-value=20 Score=26.98 Aligned_cols=49 Identities=10% Similarity=0.093 Sum_probs=32.5
Q ss_pred EEEEccCCCCCCC---HHHHHHhhccCCceEEEEEeCCEEEEEeCCHHHHHHHH
Q 030175 9 TLFVINFDPIRTR---ERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKAL 59 (182)
Q Consensus 9 ~l~V~nL~p~~~~---e~~L~~~F~~~G~i~~~~i~~g~afV~f~~~~~a~~Ai 59 (182)
.=+|||| +.-.. .+.+.++.++||.|..+.+. +-=+|...+.+.+..++
T Consensus 9 ~p~lG~l-~~l~~~~~~~~~~~~~~kyG~if~~~~~-~~~~vvl~~~~~i~~v~ 60 (453)
T d2ij2a1 9 FGELKNL-PLLNTDKPVQALMKIADELGEIFKFEAP-GRVTRYLSSQRLIKEAC 60 (453)
T ss_dssp CGGGTTG-GGGCSSCHHHHHHHHHHHHCSEEEEEET-TEEEEEECCHHHHHHHT
T ss_pred cchhhCH-HHhCCCCHHHHHHHHHHHhCCEEEEEeC-CceEEEECCHHHHHHHH
Confidence 3457888 43211 35678888999999888774 33445567777776665
No 138
>d2od6a1 d.58.4.22 (A:1-109) Hypothetical protein GOS_2359375 {environmental samples}
Probab=26.33 E-value=67 Score=19.64 Aligned_cols=40 Identities=3% Similarity=-0.025 Sum_probs=26.4
Q ss_pred HHHHHhhccCCceEEEEE----eC----CEEEEEeCCHHHHHHHHHhc
Q 030175 23 RDIKRHFEPYGNVLHVRI----RR----NFAFVQFETQEEATKALEST 62 (182)
Q Consensus 23 ~~L~~~F~~~G~i~~~~i----~~----g~afV~f~~~~~a~~Ai~~l 62 (182)
+++.+.|.+.|-+..+.. .. -..+.+|.+.++.++|.+.+
T Consensus 32 ~~~~~~Lk~~Gl~r~~~~~iwNk~~~fr~~~i~EYkd~~Afk~Cq~i~ 79 (109)
T d2od6a1 32 PVWVKEMKSRGLLKFSMNRVWNKGEVFRVVMTYEYKDRASFEANIAYL 79 (109)
T ss_dssp HHHHHHHHTTTEEEEEEEEECSSSSCEEEEEEEEESSHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCceEEEEEEeCCCCcEEEEEEEEECCHHHHHHHHHHH
Confidence 345566777886554432 22 24567999999988887765
No 139
>d1jjcb4 d.58.13.1 (B:682-785) Phenylalanyl-tRNA synthetase {Thermus thermophilus [TaxId: 274]}
Probab=26.15 E-value=53 Score=19.77 Aligned_cols=24 Identities=8% Similarity=0.113 Sum_probs=17.2
Q ss_pred CCCCCHHHHHHhhccCC--ceEEEEE
Q 030175 17 PIRTRERDIKRHFEPYG--NVLHVRI 40 (182)
Q Consensus 17 p~~~~e~~L~~~F~~~G--~i~~~~i 40 (182)
+..++.++|.+++.+.+ .+..|.+
T Consensus 21 ~~~~~~~~i~~~i~~~~~~~l~~v~l 46 (104)
T d1jjcb4 21 PAPTPYGEVEALVREAAGPYLESLAL 46 (104)
T ss_dssp ESSSCHHHHHHHHHHHHCTTEEEEEE
T ss_pred CCCCCHHHHHHHHHHhcccccccceE
Confidence 45788899988887654 4666665
No 140
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.99 E-value=27 Score=25.86 Aligned_cols=55 Identities=15% Similarity=0.115 Sum_probs=31.6
Q ss_pred EEEEccCCCCCCCHH----HHHHhhccCCceEEEEEeCCEEEEEeCCHHHHHHHHHhcCCCcc
Q 030175 9 TLFVINFDPIRTRER----DIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKL 67 (182)
Q Consensus 9 ~l~V~nL~p~~~~e~----~L~~~F~~~G~i~~~~i~~g~afV~f~~~~~a~~Ai~~l~g~~~ 67 (182)
.=+|||+ . .+... .|.++..+||.|..+.|. +.-+|...+.+.++.++.. ++..+
T Consensus 11 ~P~lG~~-~-~l~~~~~~~~~~~~~~kyG~i~~~~~g-~~~~vvv~dpe~i~~il~~-~~~~f 69 (467)
T d1r9oa_ 11 LPVIGNI-L-QIGIKDISKSLTNLSKVYGPVFTLYFG-LKPIVVLHGYEAVKEALID-LGEEF 69 (467)
T ss_dssp CC------C-CBCHHHHHHHHHHHHHHHCSEEEEESS-SCEEEEECSHHHHHHHHTT-TTTTT
T ss_pred CCccccH-H-HhCCcCHHHHHHHHHHHhCCEEEEEEC-CeeEEEECCHHHHHHHHHh-CCccc
Confidence 3468888 4 34333 456777889999887763 2345567788998888753 44444
No 141
>d1xs5a_ c.94.1.1 (A:) Putative lipoprotein (NlpA family) {Treponema pallidum [TaxId: 160]}
Probab=25.82 E-value=49 Score=22.56 Aligned_cols=45 Identities=16% Similarity=0.113 Sum_probs=26.0
Q ss_pred CCEEEEccCCCCCCCH--HHHHHhhccCCceEEEEEeCCEEEEEeCCHHHHHHHHH
Q 030175 7 TKTLFVINFDPIRTRE--RDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALE 60 (182)
Q Consensus 7 ~~~l~V~nL~p~~~~e--~~L~~~F~~~G~i~~~~i~~g~afV~f~~~~~a~~Ai~ 60 (182)
..+|-||-+ +....+ +.++++|.++| ..|. +|.|.+-.++..||.
T Consensus 2 ~~ti~ig~~-~~~~~~~l~~~k~~~k~~G--i~Ve------~v~f~~g~~~~~Al~ 48 (240)
T d1xs5a_ 2 DETVGVGVL-SEPHARLLEIAKEEVKKQH--IELR------IVEFTNYVALNEAVM 48 (240)
T ss_dssp CEEEEEEEC-STTHHHHHHHHHHHHHTTT--EEEE------EEECSCHHHHHHHHH
T ss_pred CceEEEEec-CCCcHHHHHHHHHHHHHcC--CEEE------EEEeCChhhHHHHHH
Confidence 457888888 542222 34578888888 2222 345555555555543
No 142
>d1mjca_ b.40.4.5 (A:) Major cold shock protein {Escherichia coli [TaxId: 562]}
Probab=25.60 E-value=18 Score=20.50 Aligned_cols=47 Identities=11% Similarity=0.151 Sum_probs=23.1
Q ss_pred CceEEEEEeCCEEEEEeCCH-HHHHHHHHhcCC---Cc-cCCcEEEEEEeec
Q 030175 33 GNVLHVRIRRNFAFVQFETQ-EEATKALESTDR---SK-LVDRVISVEYALK 79 (182)
Q Consensus 33 G~i~~~~i~~g~afV~f~~~-~~a~~Ai~~l~g---~~-~~g~~l~V~~a~~ 79 (182)
|.|+...-.+||+||+-++- +++---+..|.. .. ..|..|..++...
T Consensus 6 G~Vk~f~~~kGfGFI~~d~g~~diFvH~s~l~~~~~~~L~~G~~V~f~~~~~ 57 (69)
T d1mjca_ 6 GIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESG 57 (69)
T ss_dssp EEEEEEETTTTEEEEEETTSCCCEEEEGGGBCCTTTCCCCTTCEEEEEEECC
T ss_pred EEEEEEeCCCCEEEEEEcCCCccEEEEhHHhcccCCCcCCCCCEEEEEEEeC
Confidence 34444444689999987653 222111122222 22 2467666665543
No 143
>d1vqos1 d.12.1.1 (S:1-81) Ribosomal protein L23 {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=25.24 E-value=20 Score=21.14 Aligned_cols=49 Identities=16% Similarity=0.242 Sum_probs=32.0
Q ss_pred EEEccCCCCCCCHHHHHHhhcc-CC-ceEEEEE---e--CCEEEEEeCCHHHHHHHH
Q 030175 10 LFVINFDPIRTRERDIKRHFEP-YG-NVLHVRI---R--RNFAFVQFETQEEATKAL 59 (182)
Q Consensus 10 l~V~nL~p~~~~e~~L~~~F~~-~G-~i~~~~i---~--~g~afV~f~~~~~a~~Ai 59 (182)
.|+-.+ ...++..+|++.+++ |+ .|..|.. + ..-|||.+.....|++..
T Consensus 23 ~y~F~V-~~~A~K~~IK~AVe~lf~VkV~~Vnt~~~~~~~KkA~V~L~~~~~a~dia 78 (81)
T d1vqos1 23 KLQFAV-DDRASKGEVADAVEEQYDVTVEQVNTQNTMDGEKKAVVRLSEDDDAQEVA 78 (81)
T ss_dssp EEEEEE-CTTCCHHHHHHHHHHHHCCCEEEEEEEECTTSSEEEEEEECTTSCHHHHH
T ss_pred EEEEEE-cCcCCHHHHHHHHHHHcCCceeEEEEeEcCCCcEEEEEEeCCCCcHHHHH
Confidence 344445 347899998888875 55 4555544 1 246999998777766554
No 144
>d1h95a_ b.40.4.5 (A:) Y-box protein 1 cold shock domain (YB1-CSD) {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.30 E-value=15 Score=21.43 Aligned_cols=19 Identities=21% Similarity=0.538 Sum_probs=12.9
Q ss_pred CceEEEEEeCCEEEEEeCC
Q 030175 33 GNVLHVRIRRNFAFVQFET 51 (182)
Q Consensus 33 G~i~~~~i~~g~afV~f~~ 51 (182)
|.|+...-.+||+||+-.+
T Consensus 11 G~VKwfn~~KGfGFI~~dd 29 (79)
T d1h95a_ 11 GTVKWFNVRNGYGFINRND 29 (79)
T ss_dssp EEEEEEETTTTEEEEEEGG
T ss_pred EEEEEEcCCCCeEEEEECC
Confidence 4555444469999998654
No 145
>d1f00i3 d.169.1.3 (I:842-939) Intimin {Escherichia coli [TaxId: 562]}
Probab=24.30 E-value=13 Score=22.81 Aligned_cols=19 Identities=16% Similarity=0.581 Sum_probs=15.2
Q ss_pred ccCCCCCCCHHHHHHhhccCCc
Q 030175 13 INFDPIRTRERDIKRHFEPYGN 34 (182)
Q Consensus 13 ~nL~p~~~~e~~L~~~F~~~G~ 34 (182)
|.| | .+..+|+++|.++|.
T Consensus 24 g~L-p--sSq~eL~~vy~~WGa 42 (98)
T d1f00i3 24 GKL-P--SSQNELENVFKAWGA 42 (98)
T ss_dssp CBC-C--SSHHHHHHHHHHHCC
T ss_pred CCC-C--ccHHHHHHHHhcccc
Confidence 347 5 578999999999885
No 146
>d2ix0a2 b.40.4.5 (A:4-82) Exoribonuclease 2, RNB {Escherichia coli [TaxId: 562]}
Probab=24.04 E-value=15 Score=21.51 Aligned_cols=36 Identities=11% Similarity=0.150 Sum_probs=19.1
Q ss_pred eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEe
Q 030175 41 RRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77 (182)
Q Consensus 41 ~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a 77 (182)
.+|||||..++.++.--.-..|+ ..++|-.+.|.+.
T Consensus 27 ~~G~GFv~~d~~~DifI~~~~~~-~A~~GD~V~v~i~ 62 (79)
T d2ix0a2 27 EKGFGFLEVDAQKSYFIPPPQMK-KVMHGDRIIAVIH 62 (79)
T ss_dssp C--CEEEEEETTEEEEECHHHHT-TCCTTCEEEEEEE
T ss_pred CCCcEEEEECCCCcEEECHHHHc-CCCCCCEEEEEEE
Confidence 58999999876433222222222 3446666777764
No 147
>d1wf6a_ c.15.1.5 (A:) DNA topoisomerase II binding protein 1, TopBP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.97 E-value=18 Score=22.81 Aligned_cols=36 Identities=11% Similarity=0.281 Sum_probs=26.1
Q ss_pred CCCEEEEccCCCCCCCHHHHHHhhccCCceEEEEEeCC
Q 030175 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN 43 (182)
Q Consensus 6 ~~~~l~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i~~g 43 (182)
.+++|||.++ . ....++|..++..+|....-.+...
T Consensus 42 ~G~~i~isGf-~-~~~~~~l~~~i~~~GG~~~~~~~~~ 77 (132)
T d1wf6a_ 42 DGCRIYLCGF-S-GRKLDKLRRLINSGGGVRFNQLNED 77 (132)
T ss_dssp TTCEEEEESC-C-SHHHHHHHHHHHHTTCEEESSCCSS
T ss_pred CCeEEEEeeC-C-CHHHHHHHHHHHHcCCEEecccCCC
Confidence 4789999999 4 4567889999999986554344333
No 148
>d2f1la2 b.43.3.4 (A:7-95) 16S rRNA processing protein RimM, N-terminal domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=22.75 E-value=29 Score=20.05 Aligned_cols=25 Identities=4% Similarity=0.019 Sum_probs=19.1
Q ss_pred eCCEEEEEeCCHHHHHHHHHhcCCCc
Q 030175 41 RRNFAFVQFETQEEATKALESTDRSK 66 (182)
Q Consensus 41 ~~g~afV~f~~~~~a~~Ai~~l~g~~ 66 (182)
.....+|.|+..++.++|.+ |.|..
T Consensus 55 ~~~~~~vk~~~i~~r~~Ae~-l~g~~ 79 (89)
T d2f1la2 55 HGKVLAAKLKGLDDREEART-FTGYE 79 (89)
T ss_dssp ETTEEEEEETTCCSHHHHHT-TTTCE
T ss_pred cccEEEEEEcCCCCHHHHHH-hCCCE
Confidence 46778899999888888864 55554
No 149
>d1r6ja_ b.36.1.1 (A:) Syntenin 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.90 E-value=45 Score=19.11 Aligned_cols=20 Identities=15% Similarity=0.341 Sum_probs=9.5
Q ss_pred CCCHHHHHHhhccCCceEEE
Q 030175 19 RTRERDIKRHFEPYGNVLHV 38 (182)
Q Consensus 19 ~~~e~~L~~~F~~~G~i~~~ 38 (182)
+++.+++.+++.+.+....+
T Consensus 57 ~~t~~~~~~ll~~~~~~v~l 76 (82)
T d1r6ja_ 57 GLKDSQIADILSTSGTVVTI 76 (82)
T ss_dssp TCCHHHHHHHHHHSCSEEEE
T ss_pred eCCHHHHHHHHHcCCCEEEE
Confidence 44455555555555443333
No 150
>d1l6ja1 a.20.1.2 (A:29-105) Gelatinase B (MMP-9) {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.56 E-value=16 Score=21.25 Aligned_cols=54 Identities=13% Similarity=0.074 Sum_probs=27.1
Q ss_pred EEEccCCCCCCCH-HHHHHhhccCCceEEEEEeCCEEEEEeCCHHHHHHHHHhcCCCccCC
Q 030175 10 LFVINFDPIRTRE-RDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69 (182)
Q Consensus 10 l~V~nL~p~~~~e-~~L~~~F~~~G~i~~~~i~~g~afV~f~~~~~a~~Ai~~l~g~~~~g 69 (182)
+|.+-+ -.++++ +..+.++.+||-+....... .-...++|.+.++.+.|..+.|
T Consensus 2 ~fpg~~-~~~~~d~~~a~~yL~~fGYl~~~~~~~-----~~~~~~~AIk~fQ~f~gL~vTG 56 (77)
T d1l6ja1 2 LFPGDL-RTNLTDRQLAEEYLYRYGYTRVAEMRG-----ESKSLGPALLLLQKQLSLPETG 56 (77)
T ss_dssp CCTTCC-CCCCCHHHHHHHHHHHTTCC----------------CHHHHHHHHHHHTCCCCS
T ss_pred cCCccc-ccccchHHHHHHHHHHcCCCCCCCccc-----chHHHHHHHHHHHHHcCCCCCC
Confidence 344555 334555 44678899999765433210 0122356666666666666555
No 151
>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}
Probab=21.24 E-value=79 Score=21.73 Aligned_cols=49 Identities=12% Similarity=0.016 Sum_probs=35.4
Q ss_pred EEccCCCCCCCHHHHHHhhccCCceEEEEE-------eCCEEEEEeCCHHHHHHHHH
Q 030175 11 FVINFDPIRTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKALE 60 (182)
Q Consensus 11 ~V~nL~p~~~~e~~L~~~F~~~G~i~~~~i-------~~g~afV~f~~~~~a~~Ai~ 60 (182)
||+|. ....+--.|-..|...|.-+.+.. +.+.-++.+.+.++...++.
T Consensus 25 ~ItN~-SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~p~~~~~~~~~t~~~m~~~~~ 80 (223)
T d1u7za_ 25 YISDH-SSGKMGFAIAAAAARRGANVTLVSGPVSLPTPPFVKRVDVMTALEMEAAVN 80 (223)
T ss_dssp EEEEC-CCSHHHHHHHHHHHHTTCEEEEEECSCCCCCCTTEEEEECCSHHHHHHHHH
T ss_pred eeccC-CcHHHHHHHHHHHHHcCCchhhhhcccccCcccccccceehhhHHHHHHHH
Confidence 56777 556666788888888884333322 46788999999988887774
No 152
>d3ceda1 d.58.18.13 (A:247-341) Methionine import ATP-binding protein MetN2 {Staphylococcus aureus [TaxId: 1280]}
Probab=20.77 E-value=50 Score=19.51 Aligned_cols=45 Identities=18% Similarity=0.186 Sum_probs=28.7
Q ss_pred CCHHHHHHhhccCC---ceEEEEE------eCCEEEEEeC--CHHHHHHHHHhcCC
Q 030175 20 TRERDIKRHFEPYG---NVLHVRI------RRNFAFVQFE--TQEEATKALESTDR 64 (182)
Q Consensus 20 ~~e~~L~~~F~~~G---~i~~~~i------~~g~afV~f~--~~~~a~~Ai~~l~g 64 (182)
+.+--|-++..+|+ .|....| .-|.-+|++. +.+..++|+..|..
T Consensus 29 a~~Pvis~l~r~~~v~vnIL~g~I~~i~~~~~G~Liv~l~G~~~~~i~~ai~~L~~ 84 (95)
T d3ceda1 29 TTEPIVSSLSTAYDIKINILEANIKNTKNGTVGFLVLHIPYISSVDFGKFEKELIE 84 (95)
T ss_dssp CHHHHHHHHHHHHTCCCEEEEEEEEEETTEEEEEEEEEESCCCHHHHHHHHHHHHH
T ss_pred cCchHHHHHHHHhCCceEEEEEEeEEeCCeeEEEEEEEEecCCHHHHHHHHHHHHH
Confidence 45656677777777 3444444 1366789996 45667888876654
No 153
>d2cg4a2 d.58.4.2 (A:67-152) Regulatory protein AsnC {Escherichia coli [TaxId: 562]}
Probab=20.57 E-value=74 Score=18.05 Aligned_cols=41 Identities=12% Similarity=0.075 Sum_probs=33.9
Q ss_pred CCHHHHHHhhccCCceEEEEEeCC----EEEEEeCCHHHHHHHHH
Q 030175 20 TRERDIKRHFEPYGNVLHVRIRRN----FAFVQFETQEEATKALE 60 (182)
Q Consensus 20 ~~e~~L~~~F~~~G~i~~~~i~~g----~afV~f~~~~~a~~Ai~ 60 (182)
...+++.+.+...-+|..|....| ++.|.+.+.++.+..+.
T Consensus 14 ~~~~~~~~~l~~~peV~~~~~vtG~~D~i~~v~~~d~~~l~~~i~ 58 (86)
T d2cg4a2 14 KDYPSALAKLESLDEVTEAYYTTGHYSIFIKVMCRSIDALQHVLI 58 (86)
T ss_dssp GGHHHHHHHHHTCTTEEEEEEESSSCSEEEEEEESCHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCEEEEEEecCCceEEEEEEECCHHHHHHHHH
Confidence 456788888999999999988655 67889999999988763
No 154
>d2fiua1 d.58.4.16 (A:1-95) Hypothetical protein Atu0297 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=20.54 E-value=43 Score=19.79 Aligned_cols=17 Identities=12% Similarity=0.280 Sum_probs=14.6
Q ss_pred EEEEEeCCHHHHHHHHH
Q 030175 44 FAFVQFETQEEATKALE 60 (182)
Q Consensus 44 ~afV~f~~~~~a~~Ai~ 60 (182)
.++|+|.+.++|.++..
T Consensus 54 ~viieFps~e~A~~~~~ 70 (95)
T d2fiua1 54 NVVIEFPSVQHAIDCYN 70 (95)
T ss_dssp EEEEEESSHHHHHHHHH
T ss_pred EEEEEcCCHHHHHHHHC
Confidence 67899999999998764
No 155
>d1qeza_ b.40.5.1 (A:) Inorganic pyrophosphatase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=20.45 E-value=33 Score=22.98 Aligned_cols=37 Identities=16% Similarity=0.285 Sum_probs=25.3
Q ss_pred HHHHHHhhccCCceEEEEEeCCEEEEEeCCHHHHHHHHHh
Q 030175 22 ERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61 (182)
Q Consensus 22 e~~L~~~F~~~G~i~~~~i~~g~afV~f~~~~~a~~Ai~~ 61 (182)
.++|+.+|..|-.+.. .+-+.+..|.+.++|.+.|+.
T Consensus 127 l~~I~~fF~~YK~le~---~K~v~v~g~~~~~~A~~~I~~ 163 (170)
T d1qeza_ 127 KNKIVHFFEHYKELEP---GKYVKISGWGSATEAKNRIQL 163 (170)
T ss_dssp HHHHHHHHHHTTTTST---TCCEEEEEEECHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccCC---CCeEEEccccCHHHHHHHHHH
Confidence 4678889998853321 123456678899999887764
No 156
>d1j5ya2 d.94.2.1 (A:68-174) Putative transcriptional regulator TM1602, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=20.44 E-value=92 Score=19.08 Aligned_cols=46 Identities=11% Similarity=0.160 Sum_probs=34.8
Q ss_pred CCCHHHHHHhhccCCceEEEEE-eCC----EEEEEeCCHHHHHHHHHhcCC
Q 030175 19 RTRERDIKRHFEPYGNVLHVRI-RRN----FAFVQFETQEEATKALESTDR 64 (182)
Q Consensus 19 ~~~e~~L~~~F~~~G~i~~~~i-~~g----~afV~f~~~~~a~~Ai~~l~g 64 (182)
.-++++|..+...-|.|.+|.+ ..- -|-+...+..+++..++.|..
T Consensus 15 e~~~~EL~~IVd~Gg~V~DV~VeHpvYGei~~~L~I~sr~Dv~~F~~~l~~ 65 (107)
T d1j5ya2 15 EEIKEELLCVVRNGGRIVDVIVEHPVYGEIRGIIDVSSEEEVLKFVNLMEM 65 (107)
T ss_dssp GGHHHHHHHHHHTTCEEEEEEEEETTTEEEEEEEEECSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEEEEEecCCCceEEEEEecCCHHHHHHHHHHHhc
Confidence 4567888888877778999888 232 366778899999998887753
No 157
>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}
Probab=20.42 E-value=13 Score=18.03 Aligned_cols=13 Identities=23% Similarity=0.606 Sum_probs=9.3
Q ss_pred CHHHHHHhhccCC
Q 030175 21 RERDIKRHFEPYG 33 (182)
Q Consensus 21 ~e~~L~~~F~~~G 33 (182)
++++|++.|.-|-
T Consensus 1 seeel~eAF~~FD 13 (33)
T d2hf5a1 1 SEEEIREAFRVFD 13 (33)
T ss_dssp CHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHhC
Confidence 4678888887763
No 158
>d2bkfa1 d.15.2.2 (A:1-85) Next to BRCA1 gene 1 protein, NBR1 (KIAA0049) {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.18 E-value=47 Score=19.64 Aligned_cols=58 Identities=17% Similarity=0.125 Sum_probs=34.7
Q ss_pred CCCCCHHHHHHhhccCCceEEEEE---eCCEEEEEeCCHHHHHHHHHhcCCCccCCcEEEEEEe
Q 030175 17 PIRTRERDIKRHFEPYGNVLHVRI---RRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77 (182)
Q Consensus 17 p~~~~e~~L~~~F~~~G~i~~~~i---~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l~V~~a 77 (182)
|..+++++|...+...-.+..+.| -..--.|...+.++.+.|++... -.|..|++.+.
T Consensus 23 ~~~~~~~~L~~~i~~rf~l~~~~lkY~Ddd~e~v~l~~d~dl~E~~~~a~---~~~~~irl~v~ 83 (85)
T d2bkfa1 23 PENTTWADIEAMVKVSFDLNTIQIKYLDEENEEVSINSQGEYEEALKMAV---KQGNQLQMQVH 83 (85)
T ss_dssp GGGCCHHHHHHHHHHHHTCSSEEEEEECTTSCEEEECSHHHHHHHHHHHH---HTTTEEEEEEE
T ss_pred CCCCcHHHHHHHHHHhcCcccceEEEEcCCCCEEEEecHHHHHHHHHHHh---cCCCEEEEEEe
Confidence 567889888877764222333333 12334566778888888887422 24566666553
Done!