Query 030178
Match_columns 182
No_of_seqs 107 out of 1185
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 15:40:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030178.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030178hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1pyf_A IOLS protein; beta-alph 100.0 6.2E-45 2.1E-49 295.2 16.7 174 4-182 1-176 (312)
2 3v0s_A Perakine reductase; AKR 100.0 5.5E-45 1.9E-49 298.4 15.4 175 4-182 1-177 (337)
3 3n2t_A Putative oxidoreductase 100.0 6.7E-45 2.3E-49 299.1 15.3 173 4-182 19-197 (348)
4 1pz1_A GSP69, general stress p 100.0 2.6E-44 8.8E-49 294.0 15.8 174 4-182 1-176 (333)
5 1ynp_A Oxidoreductase, AKR11C1 100.0 2.5E-44 8.5E-49 292.4 15.0 169 2-181 19-189 (317)
6 3n6q_A YGHZ aldo-keto reductas 100.0 7.6E-44 2.6E-48 292.6 18.0 173 3-182 12-194 (346)
7 3erp_A Putative oxidoreductase 100.0 1E-43 3.5E-48 292.5 17.8 173 3-182 33-215 (353)
8 3eau_A Voltage-gated potassium 100.0 8.9E-44 3.1E-48 290.0 14.9 171 4-182 3-181 (327)
9 1ur3_M Hypothetical oxidoreduc 100.0 5E-43 1.7E-47 284.9 18.1 172 3-181 22-201 (319)
10 4exb_A Putative uncharacterize 100.0 2.5E-43 8.6E-48 283.5 14.5 170 3-180 29-209 (292)
11 3lut_A Voltage-gated potassium 100.0 3.6E-43 1.2E-47 290.6 15.1 171 3-182 37-215 (367)
12 3ln3_A Dihydrodiol dehydrogena 100.0 8.7E-42 3E-46 278.1 15.7 161 1-182 2-192 (324)
13 1vbj_A Prostaglandin F synthas 100.0 1.3E-41 4.4E-46 272.1 15.5 157 1-181 6-166 (281)
14 3up8_A Putative 2,5-diketo-D-g 100.0 1.4E-41 4.8E-46 273.9 14.5 155 3-182 23-181 (298)
15 4gie_A Prostaglandin F synthas 100.0 2.6E-41 8.8E-46 271.5 15.2 157 1-181 9-170 (290)
16 3o0k_A Aldo/keto reductase; ss 100.0 2.1E-41 7.1E-46 271.2 13.7 155 3-181 25-184 (283)
17 3f7j_A YVGN protein; aldo-keto 100.0 4.5E-41 1.6E-45 268.4 15.0 157 1-181 1-163 (276)
18 2wzm_A Aldo-keto reductase; ox 100.0 2.8E-41 9.5E-46 270.5 12.2 155 3-181 10-169 (283)
19 1mi3_A Xylose reductase, XR; a 100.0 8.5E-41 2.9E-45 272.1 15.1 158 1-182 1-192 (322)
20 1lqa_A TAS protein; TIM barrel 100.0 7.9E-41 2.7E-45 274.4 14.9 162 4-173 1-191 (346)
21 1hw6_A 2,5-diketo-D-gluconic a 100.0 2.3E-41 8E-46 270.3 11.3 155 3-181 2-161 (278)
22 1afs_A 3-alpha-HSD, 3-alpha-hy 100.0 6.9E-41 2.3E-45 272.7 14.0 161 1-182 1-191 (323)
23 1qwk_A Aldose reductase, aldo- 100.0 7E-41 2.4E-45 272.0 13.9 157 1-181 1-175 (317)
24 1zgd_A Chalcone reductase; pol 100.0 7.1E-41 2.4E-45 271.5 12.7 159 2-181 4-188 (312)
25 3o3r_A Aldo-keto reductase fam 100.0 2.2E-40 7.5E-45 269.0 15.1 155 4-182 2-185 (316)
26 3b3e_A YVGN protein; aldo-keto 100.0 2.1E-40 7.2E-45 268.3 14.9 155 3-181 39-197 (310)
27 3h7u_A Aldo-keto reductase; st 100.0 1.4E-40 5E-45 272.0 14.0 155 3-181 24-200 (335)
28 3buv_A 3-OXO-5-beta-steroid 4- 100.0 3.9E-40 1.3E-44 268.6 15.1 159 3-181 6-193 (326)
29 1s1p_A Aldo-keto reductase fam 100.0 5E-40 1.7E-44 268.4 15.0 159 3-182 4-191 (331)
30 4f40_A Prostaglandin F2-alpha 100.0 3.9E-40 1.3E-44 264.4 14.0 155 4-181 10-175 (288)
31 1us0_A Aldose reductase; oxido 100.0 9.2E-40 3.1E-44 265.3 15.6 155 4-182 2-185 (316)
32 1mzr_A 2,5-diketo-D-gluconate 100.0 5.1E-40 1.7E-44 264.5 13.4 154 2-181 23-181 (296)
33 3h7r_A Aldo-keto reductase; st 100.0 6.1E-40 2.1E-44 267.9 11.9 151 3-181 24-196 (331)
34 1vp5_A 2,5-diketo-D-gluconic a 100.0 2.7E-39 9.4E-44 260.5 13.5 152 5-181 15-174 (298)
35 3krb_A Aldose reductase; ssgci 100.0 4E-39 1.4E-43 263.4 12.7 159 1-182 9-199 (334)
36 4gac_A Alcohol dehydrogenase [ 100.0 2E-38 7E-43 257.9 14.7 154 4-181 2-183 (324)
37 1gve_A Aflatoxin B1 aldehyde r 100.0 1.4E-38 4.9E-43 259.3 13.7 154 15-181 4-165 (327)
38 2bp1_A Aflatoxin B1 aldehyde r 100.0 2E-38 6.9E-43 261.6 14.2 159 11-182 33-199 (360)
39 3b3d_A YTBE protein, putative 100.0 3.8E-38 1.3E-42 255.7 14.7 153 5-181 41-201 (314)
40 2bgs_A Aldose reductase; holoe 100.0 2.3E-38 7.7E-43 259.7 13.5 153 4-181 36-212 (344)
41 3cf4_A Acetyl-COA decarboxylas 77.3 0.64 2.2E-05 41.8 0.8 47 109-161 231-277 (807)
42 3iix_A Biotin synthetase, puta 72.5 9.5 0.00032 30.0 6.5 124 34-173 84-215 (348)
43 1vpq_A Hypothetical protein TM 72.0 20 0.00068 27.7 8.1 152 14-173 11-171 (273)
44 1olt_A Oxygen-independent copr 69.5 13 0.00044 30.8 6.9 60 100-165 217-292 (457)
45 4h3d_A 3-dehydroquinate dehydr 69.1 36 0.0012 25.9 12.9 98 15-124 18-120 (258)
46 3ktc_A Xylose isomerase; putat 67.7 18 0.00063 28.1 7.2 61 15-75 6-72 (333)
47 3ngj_A Deoxyribose-phosphate a 66.5 3.7 0.00013 31.3 2.7 29 35-63 155-183 (239)
48 2htm_A Thiazole biosynthesis p 66.5 43 0.0015 25.9 10.2 52 100-151 74-126 (268)
49 4h62_V Mediator of RNA polymer 66.1 1.2 4E-05 21.8 -0.1 18 158-175 4-21 (31)
50 1gk8_I Ribulose bisphosphate c 65.8 24 0.00082 24.5 6.5 96 21-127 12-111 (140)
51 3l23_A Sugar phosphate isomera 64.7 45 0.0015 25.5 8.9 52 18-75 14-70 (303)
52 2xvc_A ESCRT-III, SSO0910; cel 64.0 6.6 0.00022 23.0 2.8 20 133-152 37-56 (59)
53 2pfu_A Biopolymer transport EX 63.3 17 0.00058 22.9 5.3 49 110-163 45-93 (99)
54 2a4a_A Deoxyribose-phosphate a 62.0 45 0.0015 25.9 8.2 86 18-120 160-255 (281)
55 1wv2_A Thiazole moeity, thiazo 59.5 40 0.0014 26.0 7.4 74 100-178 84-160 (265)
56 1p1x_A Deoxyribose-phosphate a 59.0 58 0.002 24.9 8.9 86 18-121 138-229 (260)
57 3obe_A Sugar phosphate isomera 54.3 66 0.0022 24.6 8.2 36 18-58 22-57 (305)
58 3kws_A Putative sugar isomeras 53.9 57 0.0019 24.4 7.6 48 18-75 27-75 (287)
59 3vni_A Xylose isomerase domain 53.2 58 0.002 24.3 7.6 36 18-58 3-38 (294)
60 3dx5_A Uncharacterized protein 53.1 59 0.002 24.2 7.6 35 18-58 2-36 (286)
61 3ijw_A Aminoglycoside N3-acety 52.4 22 0.00076 27.5 5.0 47 106-152 17-69 (268)
62 3r12_A Deoxyribose-phosphate a 52.1 15 0.0005 28.4 3.9 38 18-63 162-199 (260)
63 3sma_A FRBF; N-acetyl transfer 51.4 37 0.0012 26.5 6.1 48 105-152 23-76 (286)
64 3ndo_A Deoxyribose-phosphate a 51.1 13 0.00046 28.0 3.5 27 35-61 144-170 (231)
65 3jx9_A Putative phosphoheptose 50.7 53 0.0018 23.4 6.5 87 37-162 25-112 (170)
66 2nyg_A YOKD protein; PFAM02522 48.0 30 0.001 26.8 5.1 46 106-151 15-66 (273)
67 1n7k_A Deoxyribose-phosphate a 47.5 33 0.0011 25.9 5.2 36 18-61 137-172 (234)
68 1vcv_A Probable deoxyribose-ph 47.4 64 0.0022 24.1 6.7 37 17-61 116-152 (226)
69 1lt8_A Betaine-homocysteine me 46.6 1E+02 0.0035 25.1 8.4 92 35-129 52-161 (406)
70 4eiv_A Deoxyribose-phosphate a 46.4 50 0.0017 25.9 6.1 52 16-74 152-207 (297)
71 3fst_A 5,10-methylenetetrahydr 46.1 85 0.0029 24.5 7.6 124 41-182 43-184 (304)
72 2r14_A Morphinone reductase; H 46.0 1.1E+02 0.0039 24.4 9.3 66 107-179 258-326 (377)
73 2jwk_A Protein TOLR; periplasm 43.8 23 0.00079 20.8 3.2 47 100-150 27-73 (74)
74 3oa3_A Aldolase; structural ge 43.6 64 0.0022 25.1 6.4 39 17-63 176-214 (288)
75 3qc0_A Sugar isomerase; TIM ba 43.2 55 0.0019 24.0 6.0 36 16-58 4-39 (275)
76 3mwd_B ATP-citrate synthase; A 42.8 62 0.0021 25.7 6.4 82 63-152 235-325 (334)
77 1v5x_A PRA isomerase, phosphor 42.6 26 0.00088 25.8 3.8 70 101-182 10-81 (203)
78 3ksm_A ABC-type sugar transpor 42.0 97 0.0033 22.5 7.8 74 102-180 15-90 (276)
79 3l9c_A 3-dehydroquinate dehydr 40.8 1.2E+02 0.004 23.1 9.1 51 100-152 106-177 (259)
80 3lmz_A Putative sugar isomeras 40.7 1E+02 0.0035 22.5 7.1 86 17-122 18-107 (257)
81 1nsj_A PRAI, phosphoribosyl an 39.6 24 0.00081 26.0 3.2 69 101-181 11-81 (205)
82 1r30_A Biotin synthase; SAM ra 39.3 49 0.0017 26.2 5.3 122 34-172 99-229 (369)
83 3l5a_A NADH/flavin oxidoreduct 39.1 1.4E+02 0.0048 24.3 8.2 95 78-179 240-344 (419)
84 2zvr_A Uncharacterized protein 38.8 51 0.0017 24.7 5.2 40 36-75 40-79 (290)
85 2xsa_A Ogoga, hyaluronoglucosa 38.8 61 0.0021 27.0 5.8 91 30-149 10-106 (447)
86 2zad_A Muconate cycloisomerase 38.8 1.4E+02 0.0047 23.3 10.4 124 35-180 139-264 (345)
87 2fkn_A Urocanate hydratase; ro 38.2 71 0.0024 27.1 6.1 123 41-181 112-260 (552)
88 1uwk_A Urocanate hydratase; hy 37.5 58 0.002 27.6 5.5 123 41-181 116-264 (557)
89 1mdl_A Mandelate racemase; iso 37.1 1.5E+02 0.0051 23.2 10.1 123 35-180 144-269 (359)
90 1vyr_A Pentaerythritol tetrani 36.9 1.6E+02 0.0054 23.4 10.2 61 108-179 255-321 (364)
91 3eeg_A 2-isopropylmalate synth 36.6 69 0.0024 25.2 5.7 103 32-146 146-254 (325)
92 3o1n_A 3-dehydroquinate dehydr 36.4 1.4E+02 0.0049 22.8 12.3 22 35-56 50-71 (276)
93 1x87_A Urocanase protein; stru 36.1 72 0.0025 27.0 5.8 120 44-181 114-259 (551)
94 3guv_A Site-specific recombina 35.6 42 0.0015 23.2 4.0 45 107-151 60-107 (167)
95 1ps9_A 2,4-dienoyl-COA reducta 34.4 2.2E+02 0.0076 24.4 10.3 132 38-179 142-308 (671)
96 2gax_A Hypothetical protein AT 34.2 76 0.0026 21.6 4.9 48 35-82 64-111 (135)
97 1ub3_A Aldolase protein; schif 33.3 56 0.0019 24.2 4.5 29 35-63 131-159 (220)
98 3gm8_A Glycoside hydrolase fam 32.8 2.7E+02 0.0091 24.9 10.9 90 30-127 300-392 (801)
99 1tzz_A Hypothetical protein L1 32.6 1.9E+02 0.0064 23.0 9.5 122 35-180 165-294 (392)
100 3fn9_A Putative beta-galactosi 32.4 2.5E+02 0.0087 24.5 11.5 103 13-127 294-396 (692)
101 2yva_A DNAA initiator-associat 32.3 63 0.0021 22.7 4.5 51 120-177 109-159 (196)
102 1vpy_A Protein (hypothetical p 32.0 1.7E+02 0.006 22.5 8.7 126 14-148 11-141 (289)
103 2o56_A Putative mandelate race 32.0 1.9E+02 0.0067 23.0 9.7 123 35-180 152-295 (407)
104 3apt_A Methylenetetrahydrofola 31.5 1.8E+02 0.0062 22.6 7.6 124 40-182 32-181 (310)
105 3p6l_A Sugar phosphate isomera 30.4 60 0.0021 23.9 4.3 33 18-58 11-43 (262)
106 2vvp_A Ribose-5-phosphate isom 29.7 83 0.0028 22.3 4.6 50 102-152 14-63 (162)
107 3g13_A Putative conjugative tr 28.4 28 0.00094 24.3 1.9 46 106-151 61-107 (169)
108 1ub3_A Aldolase protein; schif 28.2 1.8E+02 0.0061 21.4 9.1 101 32-147 14-114 (220)
109 3rmj_A 2-isopropylmalate synth 28.0 84 0.0029 25.2 5.0 79 30-122 150-234 (370)
110 2ph5_A Homospermidine synthase 27.8 30 0.001 29.1 2.3 22 37-58 94-115 (480)
111 2yr1_A 3-dehydroquinate dehydr 27.1 2E+02 0.0069 21.6 15.6 99 15-125 18-122 (257)
112 1bxb_A Xylose isomerase; xylos 26.2 1.2E+02 0.0041 24.1 5.6 20 38-57 34-53 (387)
113 2wqp_A Polysialic acid capsule 26.2 2.5E+02 0.0085 22.4 9.6 108 34-165 88-217 (349)
114 2rdx_A Mandelate racemase/muco 26.1 2.4E+02 0.0083 22.2 9.9 120 35-180 145-266 (379)
115 2b0l_A GTP-sensing transcripti 25.8 59 0.002 20.8 3.0 38 136-173 58-98 (102)
116 1x92_A APC5045, phosphoheptose 25.7 1.2E+02 0.0041 21.3 5.0 45 120-171 113-157 (199)
117 3aty_A Tcoye, prostaglandin F2 25.2 2.6E+02 0.009 22.3 11.0 132 34-180 163-335 (379)
118 1uas_A Alpha-galactosidase; TI 24.9 56 0.0019 25.9 3.4 38 14-54 6-48 (362)
119 1nzj_A Hypothetical protein YA 24.8 1.8E+02 0.006 22.6 6.2 57 103-170 54-110 (298)
120 1ydo_A HMG-COA lyase; TIM-barr 24.6 1.4E+02 0.0048 23.2 5.6 101 30-144 150-261 (307)
121 1mzh_A Deoxyribose-phosphate a 24.5 1.7E+02 0.0059 21.4 5.8 27 35-61 130-156 (225)
122 3gip_A N-acyl-D-glutamate deac 24.5 1.2E+02 0.0039 24.9 5.3 102 37-150 167-275 (480)
123 3eeg_A 2-isopropylmalate synth 24.4 2.5E+02 0.0087 21.9 7.8 26 33-58 24-49 (325)
124 4fnq_A Alpha-galactosidase AGA 24.4 99 0.0034 27.2 5.1 38 14-54 326-363 (729)
125 1xim_A D-xylose isomerase; iso 24.3 95 0.0032 24.8 4.7 20 38-57 34-53 (393)
126 1mli_A Muconolactone isomerase 24.1 66 0.0023 20.7 2.9 40 139-178 28-74 (96)
127 1r7l_A Phage protein; structur 24.1 32 0.0011 22.6 1.4 23 130-152 44-66 (110)
128 1ydn_A Hydroxymethylglutaryl-C 23.8 1E+02 0.0035 23.5 4.6 68 100-173 23-90 (295)
129 3aii_A Glutamyl-tRNA synthetas 23.8 1.9E+02 0.0064 24.8 6.5 56 103-170 145-200 (553)
130 3aal_A Probable endonuclease 4 23.6 86 0.0029 23.7 4.1 19 38-56 19-37 (303)
131 2i7g_A Monooxygenase, AGR_C_41 23.4 2.3E+02 0.0079 22.3 6.8 44 100-146 309-352 (376)
132 2q02_A Putative cytoplasmic pr 23.3 2.2E+02 0.0074 20.7 8.9 37 39-75 21-62 (272)
133 1li5_A Cysrs, cysteinyl-tRNA s 23.2 1.1E+02 0.0039 25.2 5.0 47 102-152 89-135 (461)
134 1o1x_A Ribose-5-phosphate isom 23.0 2E+02 0.0067 20.2 5.5 51 100-152 21-71 (155)
135 3gd6_A Muconate cycloisomerase 22.8 2.9E+02 0.0099 22.0 9.7 123 35-180 142-267 (391)
136 1t57_A Conserved protein MTH16 22.7 2.3E+02 0.0079 20.8 7.3 71 35-118 36-106 (206)
137 3i71_A Ethanolamine utilizatio 22.7 81 0.0028 18.4 2.8 21 133-153 30-50 (68)
138 1tv8_A MOAA, molybdenum cofact 22.5 2.6E+02 0.009 21.4 12.1 97 34-150 50-160 (340)
139 2ftp_A Hydroxymethylglutaryl-C 22.4 1.4E+02 0.0049 22.9 5.2 68 100-173 27-94 (302)
140 3hgj_A Chromate reductase; TIM 22.3 2.8E+02 0.0097 21.7 9.3 93 79-179 218-316 (349)
141 2cw6_A Hydroxymethylglutaryl-C 22.1 1.7E+02 0.006 22.3 5.7 101 30-145 149-261 (298)
142 2pgw_A Muconate cycloisomerase 22.0 2.9E+02 0.01 21.7 12.6 121 35-180 147-270 (384)
143 2cw6_A Hydroxymethylglutaryl-C 21.7 1.3E+02 0.0046 23.0 4.9 68 100-173 24-91 (298)
144 1ydo_A HMG-COA lyase; TIM-barr 21.6 1.4E+02 0.0048 23.1 5.0 68 100-173 25-92 (307)
145 1vcv_A Probable deoxyribose-ph 21.5 2.5E+02 0.0086 20.8 7.6 98 32-147 12-109 (226)
146 2eee_A Uncharacterized protein 21.4 67 0.0023 22.0 2.8 32 10-49 108-139 (149)
147 3pkz_A Recombinase SIN; small 21.4 62 0.0021 21.2 2.6 44 106-151 43-87 (124)
148 3ju3_A Probable 2-oxoacid ferr 20.9 1.8E+02 0.0062 18.9 6.1 57 6-75 6-64 (118)
149 3c8z_A Cysteinyl-tRNA syntheta 20.8 1.9E+02 0.0064 23.4 5.8 47 102-152 106-152 (414)
150 1p1x_A Deoxyribose-phosphate a 20.7 2.8E+02 0.0096 21.0 6.4 81 32-125 23-106 (260)
151 3s21_A 3-oxoacyl-[ACP] synthas 20.7 1.4E+02 0.0049 23.2 5.0 27 104-130 247-275 (345)
152 4ets_A Ferric uptake regulatio 20.5 60 0.0021 22.6 2.4 39 100-153 49-87 (162)
153 3il3_A 3-oxoacyl-[acyl-carrier 20.4 1.5E+02 0.0051 22.9 5.0 28 103-130 224-253 (323)
154 2gou_A Oxidoreductase, FMN-bin 20.4 3.2E+02 0.011 21.6 11.8 62 107-179 253-320 (365)
155 1q7z_A 5-methyltetrahydrofolat 20.4 4E+02 0.014 22.6 10.5 94 35-129 42-148 (566)
156 2g1p_A DNA adenine methylase; 20.2 90 0.0031 23.8 3.6 39 137-181 208-246 (278)
157 1szn_A Alpha-galactosidase; (b 20.0 72 0.0025 26.0 3.1 39 14-55 9-52 (417)
158 3ngj_A Deoxyribose-phosphate a 20.0 2.8E+02 0.0097 20.8 9.0 79 32-125 38-116 (239)
No 1
>1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1 PDB: 1pz0_A*
Probab=100.00 E-value=6.2e-45 Score=295.22 Aligned_cols=174 Identities=30% Similarity=0.416 Sum_probs=152.6
Q ss_pred ccceecCCCCcccCcceeccccCCCC--CCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhccCCCCCE
Q 030178 4 VRRMKLGSQGLEVSAQGLGCMGMSAL--YGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKGGFRERA 81 (182)
Q Consensus 4 m~~~~lg~~g~~vs~l~lGt~~~~~~--~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~~~r~~~ 81 (182)
|+|++||++|++||+||||||++|.. |+ ..+++++.++++.|+++|||+||||+.||+|.+|+.+|++|+..+|+++
T Consensus 1 M~~~~lg~tg~~vs~lglGt~~~g~~~~~~-~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~R~~~ 79 (312)
T 1pyf_A 1 MKKAKLGKSDLQVFPIGLGTNAVGGHNLYP-NLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFNREDV 79 (312)
T ss_dssp -CCEECTTSCCEECSBCEECTTSSCTTTCS-SCCHHHHHHHHHHHHHTTCCEEECCTTTTTTHHHHHHHHHHTTSCGGGC
T ss_pred CCeeecCCCCCcccCEeEeccccCCCCCCC-CCCHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHhhhcCCCeE
Confidence 89999999999999999999999754 43 2477889999999999999999999999999999999999988779999
Q ss_pred EEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCccccccceeecc
Q 030178 82 ELATKFGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSILYCGVV 161 (182)
Q Consensus 82 ~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~~iGvs 161 (182)
+|+||++.....+.+....+++.+++++++||++||+||||+|++|||++..+++++|++|++|+++|+||+ ||||
T Consensus 80 ~i~TK~g~~~~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~----iGvS 155 (312)
T 1pyf_A 80 VIATKAAHRKQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKKAGKIRS----IGVS 155 (312)
T ss_dssp EEEEEECEEEETTEEEECCCHHHHHHHHHHHHHHHTSSCBSEEEECSCCSSSCHHHHHHHHHHHHHTTSBSC----EEEE
T ss_pred EEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCHHHHHHHHHHHHHCCCcCE----EEec
Confidence 999997622111111134789999999999999999999999999999998899999999999999999996 9999
Q ss_pred chhHHHHHHHhcCCCeeeecC
Q 030178 162 ALVAKQMLLLFTNIDFFIYQL 182 (182)
Q Consensus 162 ~~~~~~~~~l~~~~~~~~~q~ 182 (182)
||++++++++++..+++.+|+
T Consensus 156 n~~~~~l~~~~~~~~~~~~Q~ 176 (312)
T 1pyf_A 156 NFSLEQLKEANKDGLVDVLQG 176 (312)
T ss_dssp SCCHHHHHHHTTTSCCCEEEE
T ss_pred CCCHHHHHHHHhhCCceEEec
Confidence 999999999998766766663
No 2
>3v0s_A Perakine reductase; AKR superfamily, oxidoreductase; HET: MLZ M3L MLY ATR; 1.77A {Rauvolfia serpentina} PDB: 3v0u_A 3v0t_A* 3uyi_A*
Probab=100.00 E-value=5.5e-45 Score=298.44 Aligned_cols=175 Identities=48% Similarity=0.703 Sum_probs=151.8
Q ss_pred ccceecCCCCcccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCCC-CcHHHHHHHhhccCCCCCEE
Q 030178 4 VRRMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGP-HTNEILLGKAFKGGFRERAE 82 (182)
Q Consensus 4 m~~~~lg~~g~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~-g~~e~~lG~~l~~~~r~~~~ 82 (182)
|+|++||++|++||+||||||++|..|+...+++++.++++.|+++|||+||||+.||+ |.+|+.+|++|+..+|++++
T Consensus 1 M~~~~lg~tg~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~G~sE~~lG~al~~~~R~~~~ 80 (337)
T 3v0s_A 1 MPRVKLGTQGLEVSKLGFGCMGLSGDYNDALPEEQGIAVIKEAFNCGITFFDTSDIYGENGSNEELLGKALKQLPREXIQ 80 (337)
T ss_dssp CCEEECSSSSCEEESSCEECGGGC-------CHHHHHHHHHHHHHTTCCEEECCTTSSSTTHHHHHHHHHHTTSCGGGCE
T ss_pred CCeeecCCCCceecCeeecccccCCCCCCCCCHHHHHHHHHHHHHcCCCEEEChhhhCCCCcHHHHHHHHHhhcCCcceE
Confidence 89999999999999999999999877776668899999999999999999999999997 68999999999987899999
Q ss_pred EEeccCCCcCC-CCCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCccccccceeecc
Q 030178 83 LATKFGIGIVD-GKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSILYCGVV 161 (182)
Q Consensus 83 i~tK~~~~~~~-~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~~iGvs 161 (182)
|+||++..... +......+++.+++++++||++||+||||+|++|||++..+++++|++|++|+++|+||+ ||||
T Consensus 81 i~TK~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~----iGvS 156 (337)
T 3v0s_A 81 VGTKFGIHEIGFSGVKAXGTPDYVRSCCEASLKRLDVDYIDLFYIHRIDTTVPIEITMGELXXLVEEGKIXY----VGLS 156 (337)
T ss_dssp EEEEECEEEEETTEEEECCCHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEE----EEEE
T ss_pred EEeeeccccCCCCcccCCCCHHHHHHHHHHHHHHhCCCCeeEEEecCCCCCCCHHHHHHHHHHHHHCCCeeE----Eecc
Confidence 99999875311 112234789999999999999999999999999999999999999999999999999996 9999
Q ss_pred chhHHHHHHHhcCCCeeeecC
Q 030178 162 ALVAKQMLLLFTNIDFFIYQL 182 (182)
Q Consensus 162 ~~~~~~~~~l~~~~~~~~~q~ 182 (182)
||++++++++....+++.+|+
T Consensus 157 n~~~~~l~~~~~~~~~~~~Q~ 177 (337)
T 3v0s_A 157 EASPDTIRRAHAVHPVTALQI 177 (337)
T ss_dssp SCCHHHHHHHHHHSCCCEEEE
T ss_pred CCCHHHHHHHhccCCceEEEe
Confidence 999999999987666666663
No 3
>3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR, AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans} SCOP: c.1.7.0
Probab=100.00 E-value=6.7e-45 Score=299.11 Aligned_cols=173 Identities=27% Similarity=0.379 Sum_probs=154.6
Q ss_pred ccceecCCCCcccCcceeccccCCCC-CCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhccCCCCCEE
Q 030178 4 VRRMKLGSQGLEVSAQGLGCMGMSAL-YGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKGGFRERAE 82 (182)
Q Consensus 4 m~~~~lg~~g~~vs~l~lGt~~~~~~-~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~~~r~~~~ 82 (182)
|+|++||++|++||+||||||++|.. |+. .+++++.++++.|+++|||+||||+.||+|.+|+.+|++|+. +|++++
T Consensus 19 M~~~~lg~tg~~vs~lglGt~~~g~~~~g~-~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~-~R~~v~ 96 (348)
T 3n2t_A 19 SDTIRIPGIDTPLSRVALGTWAIGGWMWGG-PDDDNGVRTIHAALDEGINLIDTAPVYGFGHSEEIVGRALAE-KPNKAH 96 (348)
T ss_dssp TSEECCTTCSSCEESEEEECTTSSCSSSCS-TTHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHH-SCCCCE
T ss_pred ceeeecCCCCCccCCEeEeCccccCCCCCC-CCHHHHHHHHHHHHHcCCCEEEChhhcCCChHHHHHHHHHhh-CCCeEE
Confidence 89999999999999999999999753 543 478899999999999999999999999999999999999998 899999
Q ss_pred EEeccCCCc--CCC---CCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCccccccce
Q 030178 83 LATKFGIGI--VDG---KYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSILY 157 (182)
Q Consensus 83 i~tK~~~~~--~~~---~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~~ 157 (182)
|+||++... ..+ ....+.+++.+++++++||++||+||||+|++|||++..+++++|++|++|+++|+||+
T Consensus 97 I~TK~g~~~~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~---- 172 (348)
T 3n2t_A 97 VATKLGLHWVGEDEKNMKVFRDSRPARIRKEVEDSLRRLRVETIDLEQIHWPDDKTPIDESARELQKLHQDGKIRA---- 172 (348)
T ss_dssp EEEEECEEEESSSTTTCEEEECCCHHHHHHHHHHHHHHHTCSSEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEE----
T ss_pred EEEeecCCCcCCCcccccccCCCCHHHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCHHHHHHHHHHHHHhCcceE----
Confidence 999996532 111 11234689999999999999999999999999999999999999999999999999996
Q ss_pred eeccchhHHHHHHHhcCCCeeeecC
Q 030178 158 CGVVALVAKQMLLLFTNIDFFIYQL 182 (182)
Q Consensus 158 iGvs~~~~~~~~~l~~~~~~~~~q~ 182 (182)
||||||++++++++++..+++.+|+
T Consensus 173 iGvSn~~~~~l~~~~~~~~~~~~Q~ 197 (348)
T 3n2t_A 173 LGVSNFSPEQMDIFREVAPLATIQP 197 (348)
T ss_dssp EEEESCCHHHHHHHHHHSCCCEEEC
T ss_pred EecCCCCHHHHHHHHHhCCccEEEe
Confidence 9999999999999998667777774
No 4
>1pz1_A GSP69, general stress protein 69; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; HET: NAP; 2.20A {Bacillus subtilis} SCOP: c.1.7.1
Probab=100.00 E-value=2.6e-44 Score=294.02 Aligned_cols=174 Identities=32% Similarity=0.399 Sum_probs=154.1
Q ss_pred ccceecCCCCcccCcceeccccCCCC-CCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhccC-CCCCE
Q 030178 4 VRRMKLGSQGLEVSAQGLGCMGMSAL-YGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKGG-FRERA 81 (182)
Q Consensus 4 m~~~~lg~~g~~vs~l~lGt~~~~~~-~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~~-~r~~~ 81 (182)
|+|++||++|++||+||||||++|.. || ..+++++.++++.|+++|||+||||+.||+|.+|+.+|++|+.. +|+++
T Consensus 1 M~~~~lg~tg~~vs~lglGt~~~g~~~~g-~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~R~~~ 79 (333)
T 1pz1_A 1 MEYTSIADTGIEASRIGLGTWAIGGTMWG-GTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEYMKRDQV 79 (333)
T ss_dssp CCEEECTTSSCEEESEEEECTGGGCTTTT-CCCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHHHTCGGGC
T ss_pred CCceecCCCCCcccCEeEechhhcCCcCC-CCCHHHHHHHHHHHHHcCCCeEECccccCCCchHHHHHHHHhcCCCcCeE
Confidence 89999999999999999999999764 55 34788899999999999999999999999999999999999873 79999
Q ss_pred EEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCccccccceeecc
Q 030178 82 ELATKFGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSILYCGVV 161 (182)
Q Consensus 82 ~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~~iGvs 161 (182)
+|+||++.....+++....+++.+++++++||++||+||||+|++|||++..+++++|++|++|+++|+||+ ||||
T Consensus 80 ~i~TK~~~~~~~~~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~----iGvS 155 (333)
T 1pz1_A 80 ILATKTALDWKNNQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDPLVPIEETAEVMKELYDAGKIRA----IGVS 155 (333)
T ss_dssp EEEEEECEEESSSCEEECCCHHHHHHHHHHHHHHTTSSCBSEEEECSCCTTSCHHHHHHHHHHHHHTTSBSC----EEEC
T ss_pred EEEEeeCccCCCCCCCCCCCHHHHHHHHHHHHHHhCCCceeEEEecCCCCCCCHHHHHHHHHHHHHCCcCCE----EEec
Confidence 999999722111111114689999999999999999999999999999998899999999999999999996 9999
Q ss_pred chhHHHHHHHhcCCCeeeecC
Q 030178 162 ALVAKQMLLLFTNIDFFIYQL 182 (182)
Q Consensus 162 ~~~~~~~~~l~~~~~~~~~q~ 182 (182)
||++++++++++..+++.+|+
T Consensus 156 n~~~~~l~~~~~~~~~~~~Q~ 176 (333)
T 1pz1_A 156 NFSIEQMDTFRAVAPLHTIQP 176 (333)
T ss_dssp SCCHHHHHHHHTTSCCCEECC
T ss_pred CCCHHHHHHHHhcCCcEEEec
Confidence 999999999998777777775
No 5
>1ynp_A Oxidoreductase, AKR11C1; aldo-keto reductase, NADPH; HET: SUC; 1.25A {Bacillus halodurans} PDB: 1ynq_A*
Probab=100.00 E-value=2.5e-44 Score=292.36 Aligned_cols=169 Identities=29% Similarity=0.496 Sum_probs=144.8
Q ss_pred CCccceecCCCCcccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhccCCCCCE
Q 030178 2 ATVRRMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKGGFRERA 81 (182)
Q Consensus 2 ~~m~~~~lg~~g~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~~~r~~~ 81 (182)
.+|+|++||++|++||+||||||++|. +.+++.++++.|+++|||+||||+.||+|.+|+.+|++|+. +|+++
T Consensus 19 ~~M~~r~lg~tg~~vs~lglGt~~~g~------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~-~R~~v 91 (317)
T 1ynp_A 19 SHMKKRQLGTSDLHVSELGFGCMSLGT------DETKARRIMDEVLELGINYLDTADLYNQGLNEQFVGKALKG-RRQDI 91 (317)
T ss_dssp -CCCEEECTTSSCEEESBCBCSCCCCS------CHHHHHHHHHHHHHTTCCEEECSCBTTBCCCHHHHHHHHTT-CGGGC
T ss_pred CCcceeecCCCCCcccCEeEcCcccCC------CHHHHHHHHHHHHHcCCCeEECccccCCCchHHHHHHHHhc-CCCeE
Confidence 469999999999999999999998753 45789999999999999999999999999999999999998 89999
Q ss_pred EEEeccCCCcCCC--CCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCccccccceee
Q 030178 82 ELATKFGIGIVDG--KYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSILYCG 159 (182)
Q Consensus 82 ~i~tK~~~~~~~~--~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~~iG 159 (182)
+|+||++.....+ .+....+++.+++++++||++||+||||+|++|||++..+++++|++|++|+++|+||+ ||
T Consensus 92 ~I~TK~~~~~~~~~~~~~~~~~~~~v~~~~e~SL~rL~~dyiDl~llH~p~~~~~~~e~~~al~~l~~~Gkir~----iG 167 (317)
T 1ynp_A 92 ILATKVGNRFEQGKEGWWWDPSKAYIKEAVKDSLRRLQTDYIDLYQLHGGTIDDPIDETIEAFEELKQEGVIRY----YG 167 (317)
T ss_dssp EEEEEC---------------CHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHHTSEEE----EE
T ss_pred EEEeeeCCCcCCCCccccCCCCHHHHHHHHHHHHHHHCCCcEeEEEecCCCCCCChHHHHHHHHHHHhCCceEE----EE
Confidence 9999998653221 12345789999999999999999999999999999998899999999999999999996 99
Q ss_pred ccchhHHHHHHHhcCCCeeeec
Q 030178 160 VVALVAKQMLLLFTNIDFFIYQ 181 (182)
Q Consensus 160 vs~~~~~~~~~l~~~~~~~~~q 181 (182)
||||+.++++++++..+++.+|
T Consensus 168 vSn~~~~~l~~~~~~~~~~~~Q 189 (317)
T 1ynp_A 168 ISSIRPNVIKEYLKRSNIVSIM 189 (317)
T ss_dssp EECCCHHHHHHHHHHSCCCEEE
T ss_pred ecCCCHHHHHHHHhcCCCEEEe
Confidence 9999999999998754455554
No 6
>3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A {Escherichia coli} SCOP: c.1.7.0 PDB: 4ast_A 4aub_A*
Probab=100.00 E-value=7.6e-44 Score=292.56 Aligned_cols=173 Identities=28% Similarity=0.461 Sum_probs=151.4
Q ss_pred CccceecCCCCcccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCCC--CcHHHHHHHhhcc--CC-
Q 030178 3 TVRRMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGP--HTNEILLGKAFKG--GF- 77 (182)
Q Consensus 3 ~m~~~~lg~~g~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~--g~~e~~lG~~l~~--~~- 77 (182)
.|+|++||++|++||.||||||+. +|...+++++.++++.|+++|||+||||+.||+ |.+|+.+|++|++ .+
T Consensus 12 ~M~~r~lg~tg~~vs~lglGt~~~---~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~al~~~~~~~ 88 (346)
T 3n6q_A 12 QMQYRYCGKSGLRLPALSLGLWHN---FGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFAAY 88 (346)
T ss_dssp SCCEEECTTSSCEEESEEEECSSS---CSTTSCHHHHHHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHHHHHHCTTT
T ss_pred CceeEecCCCCCeecCeeecCccc---cCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCCCcHHHHHHHHHHhhcccc
Confidence 499999999999999999999864 555567889999999999999999999999998 8999999999987 44
Q ss_pred CCCEEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCccccccce
Q 030178 78 RERAELATKFGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSILY 157 (182)
Q Consensus 78 r~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~~ 157 (182)
|++++|+||++....+++.....+++.+++++++||++||+||||+|++|||++..+++++|++|++|+++|+||+
T Consensus 89 R~~~~I~TK~g~~~~~~~~~~~~s~~~i~~~~e~SL~rL~~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~---- 164 (346)
T 3n6q_A 89 RDELIISTKAGYDMWPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSGKALY---- 164 (346)
T ss_dssp GGGCEEEEEECSCCSSSTTSSSSCHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEE----
T ss_pred cccEEEEEEecccCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEeEEEEeCCCCCCCHHHHHHHHHHHHHcCCeeE----
Confidence 9999999998764333322233489999999999999999999999999999999999999999999999999996
Q ss_pred eeccchhHHHHHHHhc-----CCCeeeecC
Q 030178 158 CGVVALVAKQMLLLFT-----NIDFFIYQL 182 (182)
Q Consensus 158 iGvs~~~~~~~~~l~~-----~~~~~~~q~ 182 (182)
||||||++++++++.+ ..+++.+|+
T Consensus 165 iGvSn~~~~~l~~~~~~~~~~~~~~~~~Q~ 194 (346)
T 3n6q_A 165 VGISSYSPERTQKMVELLREWKIPLLIHQP 194 (346)
T ss_dssp EEEESCCHHHHHHHHHHHHTTTCCCCEEEC
T ss_pred EEeCCCCHHHHHHHHHHHHHcCCCeEEEec
Confidence 9999999999987654 256666664
No 7
>3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp}
Probab=100.00 E-value=1e-43 Score=292.53 Aligned_cols=173 Identities=28% Similarity=0.455 Sum_probs=152.3
Q ss_pred CccceecCCCCcccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCCC--CcHHHHHHHhhcc-C--C
Q 030178 3 TVRRMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGP--HTNEILLGKAFKG-G--F 77 (182)
Q Consensus 3 ~m~~~~lg~~g~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~--g~~e~~lG~~l~~-~--~ 77 (182)
.|+|++||++|++||+||||||+. +|...+++++.++|+.|+++|||+||||+.||+ |.+|+.+|++|++ . .
T Consensus 33 ~M~~r~lg~tg~~vs~lglGt~~~---~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~al~~~~~~~ 109 (353)
T 3erp_A 33 TMEYRRCGRSGVKLPAISLGLWHN---FGDTTRVENSRALLQRAFDLGITHFDLANNYGPPPGSAECNFGRILQEDFLPW 109 (353)
T ss_dssp SCCEEECSSSSCEEESEEEECSSS---CSTTSCHHHHHHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHHHHHHTGGG
T ss_pred cceeeecCCCCCccCCeeecChhh---cCCCCCHHHHHHHHHHHHHcCCCEEEChhhhCCCCChHHHHHHHHHHhhccCC
Confidence 499999999999999999999943 455568899999999999999999999999998 8999999999986 3 3
Q ss_pred CCCEEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCccccccce
Q 030178 78 RERAELATKFGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSILY 157 (182)
Q Consensus 78 r~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~~ 157 (182)
|++++|+||++....+++.....+++.+++++++||++||+||||+|++|||++..+++++|++|++|+++|+||+
T Consensus 110 R~~v~I~TK~g~~~~~~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~aL~~l~~~Gkir~---- 185 (353)
T 3erp_A 110 RDELIISTKAGYTMWDGPYGDWGSRKYLIASLDQSLKRMGLEYVDIFYHHRPDPETPLKETMKALDHLVRHGKALY---- 185 (353)
T ss_dssp GGGCEEEEEESSCCSSSTTSSTTCHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEE----
T ss_pred CCeEEEEeeeccCCCCCcccCCCCHHHHHHHHHHHHHHhCCCeEeEEEecCCCCCCCHHHHHHHHHHHHHCCCccE----
Confidence 9999999999765333322233589999999999999999999999999999999999999999999999999996
Q ss_pred eeccchhHHHHHHHhc-----CCCeeeecC
Q 030178 158 CGVVALVAKQMLLLFT-----NIDFFIYQL 182 (182)
Q Consensus 158 iGvs~~~~~~~~~l~~-----~~~~~~~q~ 182 (182)
||||||++++++++++ ..+++.+|+
T Consensus 186 iGvSn~~~~~l~~~~~~~~~~~~~~~~~Q~ 215 (353)
T 3erp_A 186 VGISNYPADLARQAIDILEDLGTPCLIHQP 215 (353)
T ss_dssp EEEESCCHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred EEecCCCHHHHHHHHHHHHHcCCCeEEeec
Confidence 9999999999988875 257777774
No 8
>3eau_A Voltage-gated potassium channel subunit beta-2; kvbeta, cortisone, NADPH, cytoplasm, ION transport, ionic channel, NADP, phosphoprotein; HET: NDP PDN; 1.82A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2r9r_A* 2a79_A* 3lnm_A* 1exb_A* 3eb4_A* 3eb3_A* 1qrq_A* 1zsx_A*
Probab=100.00 E-value=8.9e-44 Score=290.02 Aligned_cols=171 Identities=24% Similarity=0.299 Sum_probs=150.5
Q ss_pred ccceecCCCCcccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhcc--CCCCCE
Q 030178 4 VRRMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKG--GFRERA 81 (182)
Q Consensus 4 m~~~~lg~~g~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~--~~r~~~ 81 (182)
|.|++||++|++||+||||||+. +|...+++++.++++.|+++|+|+||||+.||+|.+|+.+|++|++ .+|+++
T Consensus 3 m~yr~lG~tg~~vs~iglGt~~~---~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~~v 79 (327)
T 3eau_A 3 QFYRNLGKSGLRVSCLGLGTWVT---FGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSL 79 (327)
T ss_dssp CSEEESTTSSCEEESEEEECTTC---CCCCSCHHHHHHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHHTCCGGGC
T ss_pred chhcccCCCCCcccceeecCccc---cCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCChHHHHHHHHHhcCCccCeE
Confidence 89999999999999999999854 5556688999999999999999999999999999999999999997 479999
Q ss_pred EEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCccccccceeecc
Q 030178 82 ELATKFGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSILYCGVV 161 (182)
Q Consensus 82 ~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~~iGvs 161 (182)
+|+||+++... .......+++.+++++++||++||+||||+|++|||++..+++++|++|++|+++|+||+ ||||
T Consensus 80 ~I~TK~~~~~~-~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~----iGvS 154 (327)
T 3eau_A 80 VITTKIFWGGK-AETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMY----WGTS 154 (327)
T ss_dssp EEEEEESBCCS-SGGGBSSSHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEE----EEEE
T ss_pred EEEEeecCCCC-CCCCCCCCHHHHHHHHHHHHHHhCCCccceEEEeCCCCCCCHHHHHHHHHHHHHcCCeeE----Eeec
Confidence 99999864321 111234689999999999999999999999999999999999999999999999999996 9999
Q ss_pred chhHHHHHHHhcC------CCeeeecC
Q 030178 162 ALVAKQMLLLFTN------IDFFIYQL 182 (182)
Q Consensus 162 ~~~~~~~~~l~~~------~~~~~~q~ 182 (182)
||++++++++... .+++.+|+
T Consensus 155 n~~~~~l~~~~~~~~~~~~~~~~~~Q~ 181 (327)
T 3eau_A 155 RWSSMEIMEAYSVARQFNLIPPICEQA 181 (327)
T ss_dssp SCCHHHHHHHHHHHHHTTCCCCCEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCCceeecc
Confidence 9999999988642 45666663
No 9
>1ur3_M Hypothetical oxidoreductase YDHF; NADP binding, aldo-keto reductase; 2.57A {Escherichia coli} SCOP: c.1.7.1 PDB: 1og6_A*
Probab=100.00 E-value=5e-43 Score=284.89 Aligned_cols=172 Identities=27% Similarity=0.372 Sum_probs=151.3
Q ss_pred CccceecCCCCcccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhcc--CCCCC
Q 030178 3 TVRRMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKG--GFRER 80 (182)
Q Consensus 3 ~m~~~~lg~~g~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~--~~r~~ 80 (182)
+|+|++||+++++||+||||||++|. | ..+++++.++++.|+++|||+||||+.||+|.+|+.+|++|+. .+|++
T Consensus 22 ~M~~~~Lg~~~~~vs~lglGt~~~g~-~--~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~~ 98 (319)
T 1ur3_M 22 LVQRITIAPQGPEFSRFVMGYWRLMD-W--NMSARQLVSFIEEHLDLGVTTVDHADIYGGYQCEAAFGEALKLAPHLRER 98 (319)
T ss_dssp CCCEEECSTTCCEEESSEEECTTTTT-T--TCCHHHHHHHHHHHHHHTCCEEECCSSTTTTTHHHHHHHHHHHCGGGTTT
T ss_pred hCceEECCCCCcccccccEeccccCC-C--CCCHHHHHHHHHHHHHcCCCeEEcccccCCCcHHHHHHHHHHhCCCCCCe
Confidence 48999999999999999999999876 4 2467889999999999999999999999999999999999987 46999
Q ss_pred EEEEeccCCCcCCCC----CCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCccccccc
Q 030178 81 AELATKFGIGIVDGK----YGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSIL 156 (182)
Q Consensus 81 ~~i~tK~~~~~~~~~----~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~ 156 (182)
++|+||++......+ ...+.+++.+++++++||++||+||||+|++|||++..+.+++|++|++|+++|+||+
T Consensus 99 v~I~TK~~~~~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~--- 175 (319)
T 1ur3_M 99 MEIVSKCGIATTAREENVIGHYITDRDHIIKSAEQSLINLATDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRH--- 175 (319)
T ss_dssp CEEEEEECEECTTSTTCSSCEECCCHHHHHHHHHHHHHHHTCSCBSEEEECSCCTTCCHHHHHHHHHHHHHTTSBCC---
T ss_pred EEEEEeeccCCCCCcccccccCCCCHHHHHHHHHHHHHHhCCCCeeEEEecCCCCCCCHHHHHHHHHHHHHCCCccE---
Confidence 999999986421110 1124789999999999999999999999999999998899999999999999999997
Q ss_pred eeeccchhHHHHHHHhcCC--Ceeeec
Q 030178 157 YCGVVALVAKQMLLLFTNI--DFFIYQ 181 (182)
Q Consensus 157 ~iGvs~~~~~~~~~l~~~~--~~~~~q 181 (182)
||||||+.++++++.+.+ +++.+|
T Consensus 176 -iGvSn~~~~~l~~~~~~~~~~~~~~Q 201 (319)
T 1ur3_M 176 -FGVSNFTPAQFALLQSRLPFTLATNQ 201 (319)
T ss_dssp -EEEESCCHHHHHHHHTTCSSCCCCEE
T ss_pred -EEecCCCHHHHHHHHHhcCCCcEEEE
Confidence 999999999999998743 455555
No 10
>4exb_A Putative uncharacterized protein; aldo-keto reductase, NADP+ binding, oxidoreducta; 2.75A {Pseudomonas aeruginosa} PDB: 4exa_A
Probab=100.00 E-value=2.5e-43 Score=283.46 Aligned_cols=170 Identities=27% Similarity=0.321 Sum_probs=148.2
Q ss_pred CccceecCCCCcccCcceeccccCCCC--------CCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhc
Q 030178 3 TVRRMKLGSQGLEVSAQGLGCMGMSAL--------YGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFK 74 (182)
Q Consensus 3 ~m~~~~lg~~g~~vs~l~lGt~~~~~~--------~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~ 74 (182)
+|+|++||++|++||+||||||++|.. |+ ..+++++.++++.|+++|||+||||+.|| .+|+.+|++|+
T Consensus 29 ~m~~r~Lg~tg~~vs~lglGt~~~g~~~~~~~~~~~~-~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg--~sE~~lG~al~ 105 (292)
T 4exb_A 29 HDLHRPLGDTGLAVSPLGLGTVKFGRDQGVKYPSGFT-IPDDREAADLLALARDLGINLIDTAPAYG--RSEERLGPLLR 105 (292)
T ss_dssp TTCCEECTTSSCEECSEEEECSTTTCC---------C-CCCHHHHHHHHHHHHHTTCCEEECCTTST--THHHHHHHHHT
T ss_pred CceeeecCCCCCccCCEeEcccccCCCcccccccccC-CCCHHHHHHHHHHHHHcCCCEEEcCCccc--hHHHHHHHHhc
Confidence 589999999999999999999999752 33 34788999999999999999999999998 89999999999
Q ss_pred cCCCCCEEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecC--CCCCCHH-HHHHHHHHHhHcCcc
Q 030178 75 GGFRERAELATKFGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRI--DTQTPIE-VTVISLSLLPSFVKL 151 (182)
Q Consensus 75 ~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~--d~~~~~~-~~~~al~~l~~~G~i 151 (182)
. +|+++||+||++....++....+.+++.+++++++||++||+||||+|++||| ++..+.+ ++|++|++|+++|+|
T Consensus 106 ~-~R~~v~I~TK~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~d~~~~~~~e~~~al~~l~~~Gki 184 (292)
T 4exb_A 106 G-QREHWVIVSKVGEEFVDGQSVFDFSAAHTRRSVERSLKRLETDRIELVLVHSDGNDLDILENSEVYPTLAALKREGLI 184 (292)
T ss_dssp T-TGGGCEEEEEESBC--CCSCCBCCCHHHHHHHHHHHHHHTTSSCEEEEEEECCSCHHHHHHHSSHHHHHHHHHHTTSE
T ss_pred c-CCCcEEEEEeeccccCCCCccCCCCHHHHHHHHHHHHHHhCCCceeEEEEecCCCCccccchHHHHHHHHHHHHCCCc
Confidence 8 89999999999975433333456789999999999999999999999999999 5544555 899999999999999
Q ss_pred ccccceeeccchhHHHHHHHhcCCCeeee
Q 030178 152 KCSILYCGVVALVAKQMLLLFTNIDFFIY 180 (182)
Q Consensus 152 r~~~~~iGvs~~~~~~~~~l~~~~~~~~~ 180 (182)
|+ ||||||++++++++++.++++++
T Consensus 185 r~----iGvSn~~~~~l~~~~~~~~~~Q~ 209 (292)
T 4exb_A 185 GA----YGLSGKTVEGGLRALREGDCAMV 209 (292)
T ss_dssp EE----EEEECSSHHHHHHHHHHSSEEEE
T ss_pred eE----EEeCCCCHHHHHHHHHhhcEEee
Confidence 96 99999999999999876555444
No 11
>3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus}
Probab=100.00 E-value=3.6e-43 Score=290.61 Aligned_cols=171 Identities=24% Similarity=0.308 Sum_probs=149.7
Q ss_pred CccceecCCCCcccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhcc--CCCCC
Q 030178 3 TVRRMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKG--GFRER 80 (182)
Q Consensus 3 ~m~~~~lg~~g~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~--~~r~~ 80 (182)
.| |++||++|++||+||||||+. +|...+++++.++|+.|+++|||+||||+.||+|.+|+.+|++|+. .+|++
T Consensus 37 ~m-yr~lG~tg~~vs~iglGt~~~---~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~~ 112 (367)
T 3lut_A 37 QF-YRNLGKSGLRVSCLGLGTWVT---FGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSS 112 (367)
T ss_dssp CS-EEESTTSSCEEESEEEECTTC---CCCCSCHHHHHHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHHTCCGGG
T ss_pred hc-eeecCCCCCcccceeECCccc---cCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHHHhCCCCCce
Confidence 48 999999999999999999953 5556688999999999999999999999999999999999999997 47999
Q ss_pred EEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCccccccceeec
Q 030178 81 AELATKFGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSILYCGV 160 (182)
Q Consensus 81 ~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~~iGv 160 (182)
++|+||+++... .......+++.+++++++||++||+||||+|++|||++..+++++|++|++|+++|+||+ |||
T Consensus 113 v~I~TK~~~~~~-~~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~pd~~~~~~e~~~al~~l~~~Gkir~----iGv 187 (367)
T 3lut_A 113 LVITTKIFWGGK-AETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMY----WGT 187 (367)
T ss_dssp CEEEEEESBCCS-SGGGBSSCHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEE----EEE
T ss_pred EEEEeccccCCC-CccCCCCCHHHHHHHHHHHHHHhCCCccceEEecCCCCCCCHHHHHHHHHHHHHcCCeeE----EEe
Confidence 999999865321 111234689999999999999999999999999999999999999999999999999996 999
Q ss_pred cchhHHHHHHHhcC------CCeeeecC
Q 030178 161 VALVAKQMLLLFTN------IDFFIYQL 182 (182)
Q Consensus 161 s~~~~~~~~~l~~~------~~~~~~q~ 182 (182)
|||+++++++++.. .+++.+|+
T Consensus 188 Sn~~~~~l~~~~~~~~~~~~~~~~~~Q~ 215 (367)
T 3lut_A 188 SRWSSMEIMEAYSVARQFNLIPPICEQA 215 (367)
T ss_dssp ESCCHHHHHHHHHHHHHHTCCCCCEEEE
T ss_pred cCCCHHHHHHHHHHHHHcCCCCceeeec
Confidence 99999999888642 35555663
No 12
>3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A {Mus musculus} SCOP: c.1.7.1
Probab=100.00 E-value=8.7e-42 Score=278.05 Aligned_cols=161 Identities=23% Similarity=0.220 Sum_probs=142.3
Q ss_pred CC-CccceecCCCCcccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhcc----
Q 030178 1 MA-TVRRMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKG---- 75 (182)
Q Consensus 1 ~~-~m~~~~lg~~g~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~---- 75 (182)
|+ +|++++| ++|++||+||||||+++ ..+++++.++++.|+++|||+||||..|| +|+.+|++|++
T Consensus 2 m~~~m~~~~L-~tg~~v~~lglGt~~~~-----~~~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~ 72 (324)
T 3ln3_A 2 MSSXQHCVXL-NDGHLIPALGFGTYXPX-----EVPXSXSLEAACLALDVGYRHVDTAYAYQ---VEEEIGQAIQSXIXA 72 (324)
T ss_dssp ----CCEEEC-TTSCEEESSEEECCCCT-----TSCHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHT
T ss_pred CCcCCceEEC-CCCCCcCCeeecCCccc-----CCChHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHhhcc
Confidence 66 5999999 99999999999999863 24778899999999999999999999999 79999999986
Q ss_pred --CCCCCEEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCCC-------------------CCC
Q 030178 76 --GFRERAELATKFGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDT-------------------QTP 134 (182)
Q Consensus 76 --~~r~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~-------------------~~~ 134 (182)
.+|++++|+||++... .+++.+++++++||++||+||||+|++|||++ ..+
T Consensus 73 ~~~~R~~~~I~TK~~~~~--------~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~ 144 (324)
T 3ln3_A 73 GVVXREDLFVTTKLWCTC--------FRPELVXPALEXSLXXLQLDYVDLYIMHYPVPMXSGDNDFPVNEQGXSLLDTVD 144 (324)
T ss_dssp TSCCGGGCEEEEEECGGG--------CSHHHHHHHHHHHHHHHTCSCEEEEEESCSCCBCCSSCSSCBCTTCCBCBCCCC
T ss_pred CCcccceeEEEeeeCCcc--------CCHHHHHHHHHHHHHHhCCCcceEEEEecCccccccccccccccccccccccCC
Confidence 4799999999998653 68999999999999999999999999999975 346
Q ss_pred HHHHHHHHHHHhHcCccccccceeeccchhHHHHHHHhcCC--C--eeeecC
Q 030178 135 IEVTVISLSLLPSFVKLKCSILYCGVVALVAKQMLLLFTNI--D--FFIYQL 182 (182)
Q Consensus 135 ~~~~~~al~~l~~~G~ir~~~~~iGvs~~~~~~~~~l~~~~--~--~~~~q~ 182 (182)
++++|++|++|+++|+||+ ||||||++++++++++.. + .+.+|+
T Consensus 145 ~~e~~~al~~l~~~Gkir~----iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~ 192 (324)
T 3ln3_A 145 FCDTWERLEECXDAGLVXS----IGVSNFNHRQLERILNXPGLXYXPVCNQV 192 (324)
T ss_dssp HHHHHHHHHHHHHTTSEEE----EEEESCCHHHHHHHHTCTTCCCCCSEEEE
T ss_pred HHHHHHHHHHHHhcCCeeE----EEecCCcHHHHHHHHHhcCccCCceeeEe
Confidence 8999999999999999996 999999999999998753 3 445663
No 13
>1vbj_A Prostaglandin F synthase; TIM barrel, oxidoreductase; HET: NAP CIT; 2.10A {Trypanosoma brucei}
Probab=100.00 E-value=1.3e-41 Score=272.15 Aligned_cols=157 Identities=25% Similarity=0.282 Sum_probs=141.9
Q ss_pred CCCccceecCCCCcccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhcc--CCC
Q 030178 1 MATVRRMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKG--GFR 78 (182)
Q Consensus 1 ~~~m~~~~lg~~g~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~--~~r 78 (182)
|++|++++| ++|++||+||||||+++ +++++.++++.|+++|+|+||||..|| +|+.+|++|+. .+|
T Consensus 6 ~~~m~~~~l-~~g~~v~~lglGt~~~~-------~~~~~~~~v~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~R 74 (281)
T 1vbj_A 6 MALTQSLKL-SNGVMMPVLGFGMWKLQ-------DGNEAETATMWAIKSGYRHIDTAAIYK---NEESAGRAIASCGVPR 74 (281)
T ss_dssp TCCCCEEEC-TTSCEEESBCEECTTCC-------TTHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHSSSCG
T ss_pred CCCCceEEC-CCCCeecCeeEECCcCC-------CHHHHHHHHHHHHHcCCCEEECCcccC---CHHHHHHHHHhcCCCh
Confidence 678999999 89999999999999863 347899999999999999999999999 79999999986 579
Q ss_pred CCEEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCcccccccee
Q 030178 79 ERAELATKFGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSILYC 158 (182)
Q Consensus 79 ~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~~i 158 (182)
++++|+||++... .+++.+++++++||++||+||||+|++|||+ ..+.+++|++|++|+++|+||+ |
T Consensus 75 ~~~~i~TK~~~~~--------~~~~~v~~~~~~SL~rL~~dyiDl~~lH~p~-~~~~~~~~~al~~l~~~Gkir~----i 141 (281)
T 1vbj_A 75 EELFVTTKLWNSD--------QGYESTLSAFEKSIKKLGLEYVDLYLIHWPG-KDKFIDTWKAFEKLYADKKVRA----I 141 (281)
T ss_dssp GGCEEEEEECGGG--------CSHHHHHHHHHHHHHHHTCSCBSEEEESCCC-SSCHHHHHHHHHHHHHTTSBSC----E
T ss_pred hHEEEEeccCCCC--------CCHHHHHHHHHHHHHHhCCCcEEEEEEcCCC-CCCHHHHHHHHHHHHHCCCccE----E
Confidence 9999999998643 6799999999999999999999999999998 6778999999999999999997 9
Q ss_pred eccchhHHHHHHHhcCC--Ceeeec
Q 030178 159 GVVALVAKQMLLLFTNI--DFFIYQ 181 (182)
Q Consensus 159 Gvs~~~~~~~~~l~~~~--~~~~~q 181 (182)
|||||++++++++++.. +.+.+|
T Consensus 142 GvSn~~~~~l~~~~~~~~~~p~~~Q 166 (281)
T 1vbj_A 142 GVSNFHEHHIEELLKHCKVAPMVNQ 166 (281)
T ss_dssp EEESCCHHHHHHHHTSCSSCCSEEE
T ss_pred EeeCCCHHHHHHHHHhCCCCceeee
Confidence 99999999999999743 334555
No 14
>3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc, PSI-biology, structural genomics; 1.96A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.4e-41 Score=273.90 Aligned_cols=155 Identities=23% Similarity=0.312 Sum_probs=143.1
Q ss_pred CccceecCCCCcccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhcc--CCCCC
Q 030178 3 TVRRMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKG--GFRER 80 (182)
Q Consensus 3 ~m~~~~lg~~g~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~--~~r~~ 80 (182)
.|+|++|| |++||.||||||++ +.+++.++++.|+++|||+||||+.|| +|+.+|++|++ .+|++
T Consensus 23 ~m~~~~l~--g~~v~~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~R~~ 89 (298)
T 3up8_A 23 MMHAVSSN--GANIPALGFGTFRM--------SGAEVLRILPQALKLGFRHVDTAQIYG---NEAEVGEAIQKSGIPRAD 89 (298)
T ss_dssp SCCEECCT--TCCEESEEEECTTC--------CHHHHHHHHHHHHHHTCCEEECCTTTT---CHHHHHHHHHHHTCCGGG
T ss_pred cCceEEeC--CeecCCeeEECCcC--------CHHHHHHHHHHHHHcCCCEEECCCccc---CHHHHHHHHHHcCCChHH
Confidence 58999996 99999999999986 457899999999999999999999999 89999999997 57999
Q ss_pred EEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCccccccceeec
Q 030178 81 AELATKFGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSILYCGV 160 (182)
Q Consensus 81 ~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~~iGv 160 (182)
+||+||+++.. .+++.+++++++||++||+||||+|++|||++..+++++|++|++|+++|+||+ |||
T Consensus 90 v~I~TK~~~~~--------~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~e~~~al~~l~~~Gkir~----iGv 157 (298)
T 3up8_A 90 VFLTTKVWVDN--------YRHDAFIASVDESLRKLRTDHVDLLLLHWPGSDVPMAERIGALNEVRNAGKVRH----IGI 157 (298)
T ss_dssp CEEEEEECGGG--------CSHHHHHHHHHHHHHHHTSSCEEEEEESCSCCSSCHHHHHHHHHHHHHTTSEEE----EEE
T ss_pred EEEEeccCCCC--------CCHHHHHHHHHHHHHHhCCCcEEEEEEccCCCCCCHHHHHHHHHHHHHcCCccE----EEE
Confidence 99999998643 789999999999999999999999999999998899999999999999999996 999
Q ss_pred cchhHHHHHHHhcC--CCeeeecC
Q 030178 161 VALVAKQMLLLFTN--IDFFIYQL 182 (182)
Q Consensus 161 s~~~~~~~~~l~~~--~~~~~~q~ 182 (182)
|||++++++++++. .+++.+|+
T Consensus 158 Sn~~~~~l~~~~~~~~~~~~~~Q~ 181 (298)
T 3up8_A 158 SNFNTTQMEEAARLSDAPIATNQV 181 (298)
T ss_dssp ESCCHHHHHHHHHHCSSCEEEEEE
T ss_pred cCCCHHHHHHHHHhCCCCceEEEE
Confidence 99999999999874 46777774
No 15
>4gie_A Prostaglandin F synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: NAP; 1.25A {Trypanosoma cruzi} PDB: 4fzi_A*
Probab=100.00 E-value=2.6e-41 Score=271.53 Aligned_cols=157 Identities=25% Similarity=0.262 Sum_probs=141.4
Q ss_pred CC-CccceecCCCCcccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhcc--CC
Q 030178 1 MA-TVRRMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKG--GF 77 (182)
Q Consensus 1 ~~-~m~~~~lg~~g~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~--~~ 77 (182)
|+ .|+|++| |+|++||.||||||+++ +.+++.++++.|+++|||+||||+.|| +|+.+|++++. .+
T Consensus 9 m~~~~~~v~L-n~G~~ip~lGlGtw~~~-------d~~e~~~~v~~Al~~Gin~~DTA~~Yg---sE~~vG~~l~~~~~~ 77 (290)
T 4gie_A 9 MNCNYNCVTL-HNSVRMPQLGLGVWRAQ-------DGAETANAVRWAIEAGYRHIDTAYIYS---NERGVGQGIRESGVP 77 (290)
T ss_dssp CSSSSCEEEC-TTSCEEESBCEECTTCC-------TTHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHCCC
T ss_pred cCCCCCEEEc-CCCCCccceeEECCCCC-------CHHHHHHHHHHHHHcCCCEEecccccC---CHHHHHHHHHhcCCc
Confidence 66 5999999 99999999999999762 457899999999999999999999999 89999999987 67
Q ss_pred CCCEEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCccccccce
Q 030178 78 RERAELATKFGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSILY 157 (182)
Q Consensus 78 r~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~~ 157 (182)
|+++++.||.+... .+++.+++++++||++||+||||+|++|||+. .+.+|+|++|++|+++|+||+
T Consensus 78 r~~~~i~tk~~~~~--------~~~~~~~~~~e~SL~rL~~dyiDly~lH~p~~-~~~~e~~~al~~l~~~Gkir~---- 144 (290)
T 4gie_A 78 REEVWVTTKVWNSD--------QGYEKTLAAFERSRELLGLEYIDLYLIHWPGK-KKFVDTWKALEKLYEEKKVRA---- 144 (290)
T ss_dssp GGGSEEEEEECGGG--------CSHHHHHHHHHHHHHHHTCSCEEEEEECCCCS-SSHHHHHHHHHHHHHTTSEEE----
T ss_pred chhccccccccccC--------CChHHHHHHHHHHHHHhCCCceeeEEecCCCC-CcchHHHHHHHHHHHCCCcce----
Confidence 89999999998654 67899999999999999999999999999976 478899999999999999996
Q ss_pred eeccchhHHHHHHHhcCC--Ceeeec
Q 030178 158 CGVVALVAKQMLLLFTNI--DFFIYQ 181 (182)
Q Consensus 158 iGvs~~~~~~~~~l~~~~--~~~~~q 181 (182)
||||||+++++.++.+.. +.+++|
T Consensus 145 iGvSn~~~~~l~~~~~~~~~~~~~~q 170 (290)
T 4gie_A 145 IGVSNFEPHHLTELFKSCKIRPMVNQ 170 (290)
T ss_dssp EEEESCCHHHHHHHHTTCSSCCSEEE
T ss_pred eeecCCCHHHHHHHHHhccCCCceee
Confidence 999999999999998743 334444
No 16
>3o0k_A Aldo/keto reductase; ssgcid, ALS collaborative crystallography; 1.80A {Brucella melitensis biovar}
Probab=100.00 E-value=2.1e-41 Score=271.17 Aligned_cols=155 Identities=26% Similarity=0.322 Sum_probs=140.1
Q ss_pred CccceecCCCCcccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhcc--CCCCC
Q 030178 3 TVRRMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKG--GFRER 80 (182)
Q Consensus 3 ~m~~~~lg~~g~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~--~~r~~ 80 (182)
+|+|++| ++|++||+||||||++ +.+++.++++.|+++|||+||||+.|| +|+.+|++|++ .+|++
T Consensus 25 ~m~~~~L-~~g~~v~~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~R~~ 92 (283)
T 3o0k_A 25 TVPTVKL-NDGNHIPQLGYGVWQI--------SNDEAVSAVSEALKAGYRHIDTATIYG---NEEGVGKAINGSGIARAD 92 (283)
T ss_dssp CCCEEEC-TTSCEEESBCEECCSC--------CHHHHHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHTSSSCGGG
T ss_pred CCceEEC-CCCCEECCeeEECccC--------CHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHcCCCccc
Confidence 6999999 8999999999999986 568899999999999999999999999 69999999997 47999
Q ss_pred EEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCCCC-CCHHHHHHHHHHHhHcCccccccceee
Q 030178 81 AELATKFGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQ-TPIEVTVISLSLLPSFVKLKCSILYCG 159 (182)
Q Consensus 81 ~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~-~~~~~~~~al~~l~~~G~ir~~~~~iG 159 (182)
+||+||++... .+++.+++++++||++||+||||+|++|||++. .+++++|++|++|+++|+||+ ||
T Consensus 93 ~~i~TK~~~~~--------~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~~e~~~al~~l~~~Gkir~----iG 160 (283)
T 3o0k_A 93 IFLTTKLWNSD--------QGYESTLKAFDTSLKKLGTDYVDLYLIHWPMPSKDLFMETWRAFIKLKEEGRVKS----IG 160 (283)
T ss_dssp CEEEEEECGGG--------CSHHHHHHHHHHHHHHHTSSCEEEEEECCSCSCHHHHHHHHHHHHHHHHTTSEEE----EE
T ss_pred EEEEEccCCCC--------CCHHHHHHHHHHHHHHhCCCceeEEEECCCCCCcccHHHHHHHHHHHHHCCCcce----EE
Confidence 99999998753 678999999999999999999999999999887 467899999999999999996 99
Q ss_pred ccchhHHHHHHHhcC--CCeeeec
Q 030178 160 VVALVAKQMLLLFTN--IDFFIYQ 181 (182)
Q Consensus 160 vs~~~~~~~~~l~~~--~~~~~~q 181 (182)
||||++++++++++. ++.+.+|
T Consensus 161 vSn~~~~~l~~~~~~~~~~p~~~Q 184 (283)
T 3o0k_A 161 VSNFRTADLERLIKESGVTPVLNQ 184 (283)
T ss_dssp EESCCHHHHHHHHHHHSCCCSEEE
T ss_pred eccCcHHHHHHHHHhCCCCeEEEE
Confidence 999999999999863 3334455
No 17
>3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A*
Probab=100.00 E-value=4.5e-41 Score=268.37 Aligned_cols=157 Identities=27% Similarity=0.302 Sum_probs=141.0
Q ss_pred CC--CccceecCCCCcccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhcc--C
Q 030178 1 MA--TVRRMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKG--G 76 (182)
Q Consensus 1 ~~--~m~~~~lg~~g~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~--~ 76 (182)
|+ .|+|++|+ +|++||+||||||+++ +.+++.++++.|+++|+|+||||+.|| +|+.+|++|+. .
T Consensus 1 m~~~~m~~~~L~-~g~~v~~lglGt~~~~-------~~~~~~~~l~~Al~~G~~~~DTA~~Yg---~E~~lG~al~~~~~ 69 (276)
T 3f7j_A 1 MPTSLKDTVKLH-NGVEMPWFGLGVFKVE-------NGNEATESVKAAIKNGYRSIDTAAIYK---NEEGVGIGIKESGV 69 (276)
T ss_dssp CCSSTTCEEECT-TSCEEESBCEECTTCC-------TTHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHCS
T ss_pred CCcCCcceEECC-CCCEecceeecCCcCC-------CHHHHHHHHHHHHHcCCCEEECcCccc---CHHHHHHHHhhcCC
Confidence 55 59999995 8999999999999862 458899999999999999999999999 79999999996 5
Q ss_pred CCCCEEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCccccccc
Q 030178 77 FRERAELATKFGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSIL 156 (182)
Q Consensus 77 ~r~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~ 156 (182)
+|++++|+||++... .+++.+++++++||++||+||||+|++|||++.. ++++|++|++|+++|+||+
T Consensus 70 ~R~~~~i~TK~~~~~--------~~~~~v~~~~~~SL~rLg~dyiDl~~lH~p~~~~-~~~~~~~l~~l~~~Gkir~--- 137 (276)
T 3f7j_A 70 AREELFITSKVWNED--------QGYETTLAAFEKSLERLQLDYLDLYLIHWPGKDK-YKDTWRALEKLYKDGKIRA--- 137 (276)
T ss_dssp CGGGCEEEEEECGGG--------CSHHHHHHHHHHHHHHHTCSCEEEEEESCCCSSS-HHHHHHHHHHHHHTTSEEE---
T ss_pred CcccEEEEEeeCCCC--------CCHHHHHHHHHHHHHHhCCCeeEEEEEecCCCCc-HHHHHHHHHHHHHcCCccE---
Confidence 799999999998643 6799999999999999999999999999998765 8899999999999999996
Q ss_pred eeeccchhHHHHHHHhcC--CCeeeec
Q 030178 157 YCGVVALVAKQMLLLFTN--IDFFIYQ 181 (182)
Q Consensus 157 ~iGvs~~~~~~~~~l~~~--~~~~~~q 181 (182)
||||||++++++++++. ++.+.+|
T Consensus 138 -iGvSn~~~~~l~~~~~~~~~~~~~~Q 163 (276)
T 3f7j_A 138 -IGVSNFQVHHLEELLKDAEIKPMVNQ 163 (276)
T ss_dssp -EEEESCCHHHHHHHHHHCSSCCSEEE
T ss_pred -EEeccCCHHHHHHHHHhcCCCceeee
Confidence 99999999999999763 4444455
No 18
>2wzm_A Aldo-keto reductase; oxidoreductase; HET: NA7; 1.64A {Mycobacterium smegmatis} PDB: 2wzt_A
Probab=100.00 E-value=2.8e-41 Score=270.46 Aligned_cols=155 Identities=21% Similarity=0.268 Sum_probs=139.1
Q ss_pred CccceecCCCCcccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhcc--CCCCC
Q 030178 3 TVRRMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKG--GFRER 80 (182)
Q Consensus 3 ~m~~~~lg~~g~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~--~~r~~ 80 (182)
+|++++| ++|++||+||||||++ ..+++.++++.|+++|||+||||+.|| +|+.+|++|+. .+|++
T Consensus 10 ~m~~~~l-~~g~~v~~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~iDTA~~Yg---~E~~lG~al~~~~~~R~~ 77 (283)
T 2wzm_A 10 AIPTVTL-NDDNTLPVVGIGVGEL--------SDSEAERSVSAALEAGYRLIDTAAAYG---NEAAVGRAIAASGIPRDE 77 (283)
T ss_dssp CCCEEEC-TTSCEEESEEEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHTCCCGGG
T ss_pred CCceEEC-CCCCEEcceeEECCCC--------ChHHHHHHHHHHHHcCCCEEECCCccc---CHHHHHHHHHhcCCCccc
Confidence 6999999 9999999999999986 247899999999999999999999999 79999999986 57999
Q ss_pred EEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCCCC-CCHHHHHHHHHHHhHcCccccccceee
Q 030178 81 AELATKFGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQ-TPIEVTVISLSLLPSFVKLKCSILYCG 159 (182)
Q Consensus 81 ~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~-~~~~~~~~al~~l~~~G~ir~~~~~iG 159 (182)
++|+||++... .+++.+++++++||++||+||||+|++|||++. .+..++|++|++|+++|+||+ ||
T Consensus 78 v~i~TK~~~~~--------~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~e~~~al~~l~~~Gkir~----iG 145 (283)
T 2wzm_A 78 IYVTTKLATPD--------QGFTSSQAAARASLERLGLDYVDLYLIHWPGGDTSKYVDSWGGLMKVKEDGIARS----IG 145 (283)
T ss_dssp CEEEEEECGGG--------CSHHHHHHHHHHHHHHHTCSCEEEEEECCCTTCHHHHHHHHHHHHHHHHTTSEEE----EE
T ss_pred EEEEeccCCCC--------CCHHHHHHHHHHHHHHhCCCCEeEEEEcCCCCCCCCHHHHHHHHHHHHHcCCccE----EE
Confidence 99999997642 679999999999999999999999999999874 467899999999999999996 99
Q ss_pred ccchhHHHHHHHhcC--CCeeeec
Q 030178 160 VVALVAKQMLLLFTN--IDFFIYQ 181 (182)
Q Consensus 160 vs~~~~~~~~~l~~~--~~~~~~q 181 (182)
||||++++++++++. ++.+.+|
T Consensus 146 vSn~~~~~l~~~~~~~~~~p~~~Q 169 (283)
T 2wzm_A 146 VCNFGAEDLETIVSLTYFTPAVNQ 169 (283)
T ss_dssp EESCCHHHHHHHHHHHCCCCSEEE
T ss_pred EcCCCHHHHHHHHHhcCCCccccc
Confidence 999999999999873 3224445
No 19
>1mi3_A Xylose reductase, XR; aldo-keto reductase, beta-alpha barrel, dimer, oxidoreductase; HET: NAD; 1.80A {Candida tenuis} SCOP: c.1.7.1 PDB: 1jez_A* 1k8c_A* 1ye6_A* 1ye4_A* 1sm9_A* 1r38_A* 1z9a_A*
Probab=100.00 E-value=8.5e-41 Score=272.05 Aligned_cols=158 Identities=29% Similarity=0.384 Sum_probs=139.6
Q ss_pred CC-CccceecCCCCcccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhcc----
Q 030178 1 MA-TVRRMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKG---- 75 (182)
Q Consensus 1 ~~-~m~~~~lg~~g~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~---- 75 (182)
|+ .|++++| ++|++||+||||||+. +++++.++++.|+++|||+||||..|| +|+.+|++|+.
T Consensus 1 m~~~m~~~~L-~tg~~v~~lglGt~~~--------~~~~~~~~v~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~ 68 (322)
T 1mi3_A 1 MSASIPDIKL-SSGHLMPSIGFGCWKL--------ANATAGEQVYQAIKAGYRLFDGAEDYG---NEKEVGDGVKRAIDE 68 (322)
T ss_dssp ---CCCEEEC-TTSCEEESBCEECTTC--------CHHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHHHT
T ss_pred CCCCCceEEC-CCCCEECCeeeeCCcC--------CHHHHHHHHHHHHHcCCCEEEcccccc---CHHHHHHHHHHHhhc
Confidence 55 4999999 8999999999999974 678899999999999999999999999 79999999986
Q ss_pred --CCCCCEEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCCC----------------------
Q 030178 76 --GFRERAELATKFGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDT---------------------- 131 (182)
Q Consensus 76 --~~r~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~---------------------- 131 (182)
.+|++++|+||++... .+++.+++++++||++||+||||+|++|||+.
T Consensus 69 g~~~R~~~~i~TK~~~~~--------~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~d~~~~~~~~~ 140 (322)
T 1mi3_A 69 GLVKREEIFLTSKLWNNY--------HDPKNVETALNKTLADLKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGNNF 140 (322)
T ss_dssp TSCCGGGCEEEEEECGGG--------CSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCCCTTTCSSCTTCCSSTTCC
T ss_pred CCCChhhEEEEEeeCCCC--------CCHHHHHHHHHHHHHHhCCCCeeeEEEecCcccccCcccccccccccccccccc
Confidence 4899999999998643 67999999999999999999999999999952
Q ss_pred ---CCCHHHHHHHHHHHhHcCccccccceeeccchhHHHHHHHhcC--CCeeeecC
Q 030178 132 ---QTPIEVTVISLSLLPSFVKLKCSILYCGVVALVAKQMLLLFTN--IDFFIYQL 182 (182)
Q Consensus 132 ---~~~~~~~~~al~~l~~~G~ir~~~~~iGvs~~~~~~~~~l~~~--~~~~~~q~ 182 (182)
..+++++|++|++|+++|+||+ ||||||+.++++++++. .+++.+|+
T Consensus 141 ~~~~~~~~e~~~al~~l~~~Gkir~----iGvSn~~~~~l~~~~~~~~~~~~~~Q~ 192 (322)
T 1mi3_A 141 VYEDVPILETWKALEKLVAAGKIKS----IGVSNFPGALLLDLLRGATIKPAVLQV 192 (322)
T ss_dssp CBCCCCHHHHHHHHHHHHHTTSEEE----EEEESCCHHHHHHHHHHCSSCCCEEEE
T ss_pred cccCCCHHHHHHHHHHHHHcCCcCE----EEEcCCCHHHHHHHHHhCCCCceEeec
Confidence 2367899999999999999996 99999999999999873 34555663
No 20
>1lqa_A TAS protein; TIM barrel, structure 2 function project, S2F, structural GE oxidoreductase; HET: NDP; 1.60A {Escherichia coli} SCOP: c.1.7.1
Probab=100.00 E-value=7.9e-41 Score=274.39 Aligned_cols=162 Identities=27% Similarity=0.343 Sum_probs=140.1
Q ss_pred ccceecCCCCcccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCC-------CCcHHHHHHHhhcc-
Q 030178 4 VRRMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYG-------PHTNEILLGKAFKG- 75 (182)
Q Consensus 4 m~~~~lg~~g~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg-------~g~~e~~lG~~l~~- 75 (182)
|+|++||++|++||+||||||++|. ..+++++.++++.|+++|||+||||+.|| .|.+|+.+|++|+.
T Consensus 1 M~~~~lg~tg~~vs~lglGt~~~g~----~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~~~~~~G~sE~~lG~al~~~ 76 (346)
T 1lqa_A 1 MQYHRIPHSSLEVSTLGLGTMTFGE----QNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKH 76 (346)
T ss_dssp CCEEECTTSSCEEESEEEECTTBTT----TBCHHHHHHHHHHHHHTTCCEEECCTTCSSSCCTTTTTHHHHHHHHHHHHH
T ss_pred CCeeecCCCCCeecCeeEEccccCC----CCCHHHHHHHHHHHHHcCCCEEEChhhcCCCccCCCCCccHHHHHHHHhhc
Confidence 8999999999999999999998642 34678899999999999999999999996 67999999999987
Q ss_pred CCCCCEEEEeccCCCcCC-CCC---CCCCCHHHHHHHHHHHHHHhCCCccceEEeecC---------------CC--CCC
Q 030178 76 GFRERAELATKFGIGIVD-GKY---GYHGDPAYVRAACEASLKRLDVDCIDLYYQHRI---------------DT--QTP 134 (182)
Q Consensus 76 ~~r~~~~i~tK~~~~~~~-~~~---~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~---------------d~--~~~ 134 (182)
.+|++++|+||++..... ..+ ..+.+++.+++++++||++||+||||+|++||| |+ ..+
T Consensus 77 ~~R~~~~i~TK~~~~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~d~~~~~~ 156 (346)
T 1lqa_A 77 GSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVS 156 (346)
T ss_dssp CCGGGCEEEEEECCSCCTTCCCSSTTCCSSHHHHHHHHHHHHHHHTSSCEEEEEECSCSSCCSCTTCCSCCCCSSCCSSC
T ss_pred CCCceEEEEEeECCCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCceeEEEecCccccccccccccccccccccCCC
Confidence 479999999999753110 011 124789999999999999999999999999999 33 467
Q ss_pred HHHHHHHHHHHhHcCccccccceeeccchhHHHHHHHhc
Q 030178 135 IEVTVISLSLLPSFVKLKCSILYCGVVALVAKQMLLLFT 173 (182)
Q Consensus 135 ~~~~~~al~~l~~~G~ir~~~~~iGvs~~~~~~~~~l~~ 173 (182)
++++|++|++|+++|+||+ ||||||+.+++++++.
T Consensus 157 ~~e~~~al~~l~~~Gkir~----iGvSn~~~~~l~~~~~ 191 (346)
T 1lqa_A 157 LLDTLDALAEYQRAGKIRY----IGVSNETAFGVMRYLH 191 (346)
T ss_dssp HHHHHHHHHHHHHTTSEEE----EEEESCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCeEE----EEecCCCHHHHHHHHH
Confidence 8999999999999999996 9999999998876653
No 21
>1hw6_A 2,5-diketo-D-gluconic acid reductase; aldo-keto reductase, TIM barrel, oxidoreductase; 1.90A {Corynebacterium SP} SCOP: c.1.7.1 PDB: 1a80_A* 1m9h_A*
Probab=100.00 E-value=2.3e-41 Score=270.31 Aligned_cols=155 Identities=23% Similarity=0.257 Sum_probs=135.4
Q ss_pred CccceecCCCCcccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhcc--CCCCC
Q 030178 3 TVRRMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKG--GFRER 80 (182)
Q Consensus 3 ~m~~~~lg~~g~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~--~~r~~ 80 (182)
.|+|++| ++|++||+||||||+++ .+++.++++.|+++|+|+||||+.|| +|+.+|++|++ .+|++
T Consensus 2 ~M~~~~l-~~g~~v~~lglGt~~~~--------~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~R~~ 69 (278)
T 1hw6_A 2 TVPSIVL-NDGNSIPQLGYGVFKVP--------PADTQRAVEEALEVGYRHIDTAAIYG---NEEGVGAAIAASGIARDD 69 (278)
T ss_dssp CCCEEEC-TTSCEEESBCEECCSCC--------GGGHHHHHHHHHHHTCCEEECGGGTT---CCHHHHHHHHHHCCCGGG
T ss_pred CCceEEC-CCCCccCCeeEECCcCC--------hHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHcCCChhh
Confidence 3899999 99999999999999862 36789999999999999999999999 79999999986 57999
Q ss_pred EEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCCC-CCCHHHHHHHHHHHhHcCccccccceee
Q 030178 81 AELATKFGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDT-QTPIEVTVISLSLLPSFVKLKCSILYCG 159 (182)
Q Consensus 81 ~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~-~~~~~~~~~al~~l~~~G~ir~~~~~iG 159 (182)
++|+||++.. ..+++.+++++++||++||+||||+|++|||++ ..+.+++|++|++|+++|+||+ ||
T Consensus 70 ~~i~TK~~~~--------~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~~~~~~~e~~~al~~l~~~Gkir~----iG 137 (278)
T 1hw6_A 70 LFITTKLWND--------RHDGDEPAAAIAESLAKLALDQVDLYLVHWPTPAADNYVHAWEKMIELRAAGLTRS----IG 137 (278)
T ss_dssp CEEEEEECCC-------------CHHHHHHHHHHHHTCSCEEEEEECCCCTTCSSHHHHHHHHHHHHHTTSEEE----EE
T ss_pred EEEEEeeCCC--------CCCHHHHHHHHHHHHHHhCCCCEEEEEEcCCCCCCCCHHHHHHHHHHHHHcCCccE----EE
Confidence 9999999753 267889999999999999999999999999987 4678999999999999999996 99
Q ss_pred ccchhHHHHHHHhcC--CCeeeec
Q 030178 160 VVALVAKQMLLLFTN--IDFFIYQ 181 (182)
Q Consensus 160 vs~~~~~~~~~l~~~--~~~~~~q 181 (182)
||||++++++++++. ++.+.+|
T Consensus 138 vSn~~~~~l~~~~~~~~~~p~~~Q 161 (278)
T 1hw6_A 138 VSNHLVPHLERIVAATGVVPAVNQ 161 (278)
T ss_dssp EESCCHHHHHHHHHHHSCCCSEEE
T ss_pred ecCCCHHHHHHHHHhcCCCceeEE
Confidence 999999999999873 3224455
No 22
>1afs_A 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, NAD; HET: NAP TES; 2.50A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 1lwi_A*
Probab=100.00 E-value=6.9e-41 Score=272.71 Aligned_cols=161 Identities=22% Similarity=0.260 Sum_probs=141.7
Q ss_pred CC-CccceecCCCCcccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhcc----
Q 030178 1 MA-TVRRMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKG---- 75 (182)
Q Consensus 1 ~~-~m~~~~lg~~g~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~---- 75 (182)
|. +|++++| ++|++||+||||||++|. .+.+++.++++.|+++|||+||||..|| +|+.+|++|+.
T Consensus 1 m~~~~~~~~L-~tg~~v~~lglGt~~~g~-----~~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~ 71 (323)
T 1afs_A 1 MDSISLRVAL-NDGNFIPVLGFGTTVPEK-----VAKDEVIKATKIAIDNGFRHFDSAYLYE---VEEEVGQAIRSKIED 71 (323)
T ss_dssp CCGGGCEEEC-TTSCEEESSEEECCCCTT-----SCTTHHHHHHHHHHHTTCCEEECCTTTT---CHHHHHHHHHHHHHT
T ss_pred CCCCCceEEC-CCCCeECCeeEecccCCC-----CCHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHHHhc
Confidence 44 5999999 899999999999998642 3567899999999999999999999999 79999999986
Q ss_pred --CCCCCEEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCCC-------------------CCC
Q 030178 76 --GFRERAELATKFGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDT-------------------QTP 134 (182)
Q Consensus 76 --~~r~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~-------------------~~~ 134 (182)
.+|++++|+||++... .+++.+++++++||++||+||||+|++|||+. ..+
T Consensus 72 g~~~R~~~~I~TK~~~~~--------~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~d~~~~~~~~~~~ 143 (323)
T 1afs_A 72 GTVKREDIFYTSKLWSTF--------HRPELVRTCLEKTLKSTQLDYVDLYIIHFPMALQPGDIFFPRDEHGKLLFETVD 143 (323)
T ss_dssp TSCCGGGCEEEEEECGGG--------CSTTTHHHHHHHHHHHHCCSSEEEEEESCSCEECSSSSSSCBCTTCCBCEECCC
T ss_pred CCCChHHeEEEEecCCCc--------CCHHHHHHHHHHHHHHhCCCceeEEEecCcCcCCCCcccCcccccccccccCCC
Confidence 5799999999998643 56788999999999999999999999999942 236
Q ss_pred HHHHHHHHHHHhHcCccccccceeeccchhHHHHHHHhcCCCe----eeecC
Q 030178 135 IEVTVISLSLLPSFVKLKCSILYCGVVALVAKQMLLLFTNIDF----FIYQL 182 (182)
Q Consensus 135 ~~~~~~al~~l~~~G~ir~~~~~iGvs~~~~~~~~~l~~~~~~----~~~q~ 182 (182)
++++|++|++|+++|+||+ ||||||+.++++++++..++ +.+|+
T Consensus 144 ~~e~~~ale~l~~~Gkir~----iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~ 191 (323)
T 1afs_A 144 ICDTWEAMEKCKDAGLAKS----IGVSNFNCRQLERILNKPGLKYKPVCNQV 191 (323)
T ss_dssp HHHHHHHHHHHHHTTSEEE----EEEESCCHHHHHHHHTCTTCCSCCSEEEE
T ss_pred HHHHHHHHHHHHHcCCcCE----EEeeCCCHHHHHHHHHhcCcCCCCEEEee
Confidence 7899999999999999997 99999999999999985444 55663
No 23
>1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961; structural genomics, PSI, protein structure initiative; 1.60A {Caenorhabditis elegans} SCOP: c.1.7.1
Probab=100.00 E-value=7e-41 Score=272.01 Aligned_cols=157 Identities=25% Similarity=0.330 Sum_probs=138.0
Q ss_pred CCCc-cceecCCCCcccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhcc----
Q 030178 1 MATV-RRMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKG---- 75 (182)
Q Consensus 1 ~~~m-~~~~lg~~g~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~---- 75 (182)
|..| ++++| ++|++||+||||||++ +++++.++++.|+++|||+||||+.|| +|+.+|++|+.
T Consensus 1 ~~~~~~~~~l-~~g~~vs~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~vG~al~~~~~~ 68 (317)
T 1qwk_A 1 MSSATASIKL-SNGVEMPVIGLGTWQS--------SPAEVITAVKTAVKAGYRLIDTASVYQ---NEEAIGTAIKELLEE 68 (317)
T ss_dssp ----CCEEEC-TTSCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHH
T ss_pred CCCCcceEEC-CCCCEeCCeeEECCcC--------CHHHHHHHHHHHHHcCCCEEEcccccc---CHHHHHHHHHHHhhc
Confidence 6665 89999 7999999999999974 578899999999999999999999999 79999999986
Q ss_pred --CCCCCEEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCCC---------CCCHHHHHHHHHH
Q 030178 76 --GFRERAELATKFGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDT---------QTPIEVTVISLSL 144 (182)
Q Consensus 76 --~~r~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~---------~~~~~~~~~al~~ 144 (182)
.+|++++|+||++... .+++.+++++++||++||+||||+|++|||++ ..+++++|++|++
T Consensus 69 ~~~~R~~~~i~TK~~~~~--------~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~e~~~al~~ 140 (317)
T 1qwk_A 69 GVVKREELFITTKAWTHE--------LAPGKLEGGLRESLKKLQLEYVDLYLAHMPAAFNDDMSEHIASPVEDVWRQFDA 140 (317)
T ss_dssp TSCCGGGCEEEEEECTTT--------SSTTTHHHHHHHHHHHHTCSCBSEEEESCSCEECTTSCSEECCCHHHHHHHHHH
T ss_pred CCCChhheEEEeeeCCCc--------CCHHHHHHHHHHHHHHhCCCceeEEEEeccCccccccccccCCCHHHHHHHHHH
Confidence 4899999999998532 56788999999999999999999999999975 3478999999999
Q ss_pred HhHcCccccccceeeccchhHHHHHHHhcCC--Ceeeec
Q 030178 145 LPSFVKLKCSILYCGVVALVAKQMLLLFTNI--DFFIYQ 181 (182)
Q Consensus 145 l~~~G~ir~~~~~iGvs~~~~~~~~~l~~~~--~~~~~q 181 (182)
|+++|+||+ ||||||++++++++++.. +++.+|
T Consensus 141 l~~~Gkir~----iGvSn~~~~~l~~~~~~~~~~~~~~Q 175 (317)
T 1qwk_A 141 VYKAGLAKA----VGVSNWNNDQISRALALGLTPVHNSQ 175 (317)
T ss_dssp HHHTTSBSS----EEEESCCHHHHHHHHTTCSSCCCEEE
T ss_pred HHHcCCeeE----EEecCCCHHHHHHHHHhcCCccceec
Confidence 999999997 999999999999998743 345555
No 24
>1zgd_A Chalcone reductase; polyketide, deoxychalcone, isoflavonoid, biosynthesis, plant protein; HET: NAP; 1.70A {Medicago sativa}
Probab=100.00 E-value=7.1e-41 Score=271.47 Aligned_cols=159 Identities=24% Similarity=0.247 Sum_probs=138.9
Q ss_pred CCcccee-cCC-CCcccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhcc----
Q 030178 2 ATVRRMK-LGS-QGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKG---- 75 (182)
Q Consensus 2 ~~m~~~~-lg~-~g~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~---- 75 (182)
++|+|++ |++ +|++||+|||||+.++ .+++++.++++.|+++|||+||||..|| +|+.+|++|+.
T Consensus 4 ~~m~~~~~l~~~tg~~v~~lglGt~~~~------~~~~~~~~~v~~Al~~G~~~iDTA~~Yg---sE~~vG~al~~~~~~ 74 (312)
T 1zgd_A 4 VEIPTKVLTNTSSQLKMPVVGMGSAPDF------TCKKDTKDAIIEAIKQGYRHFDTAAAYG---SEQALGEALKEAIEL 74 (312)
T ss_dssp -CCCEEECTTSTTCCEEESBCBCCSCCT------TCCSCHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHT
T ss_pred CCCchhhhcCCCCCCCCCceeEcCcccC------CCHHHHHHHHHHHHHcCCCEEECccccC---CHHHHHHHHHHHHhc
Confidence 4799999 976 6999999999995432 1346789999999999999999999999 89999999986
Q ss_pred --CCCCCEEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCCC----------------CCCHHH
Q 030178 76 --GFRERAELATKFGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDT----------------QTPIEV 137 (182)
Q Consensus 76 --~~r~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~----------------~~~~~~ 137 (182)
.+|++++|+||++... .+++.+++++++||++||++|||+|++|||++ ..++++
T Consensus 75 g~~~R~~~~i~TK~~~~~--------~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~e 146 (312)
T 1zgd_A 75 GLVTRDDLFVTSKLWVTE--------NHPHLVIPALQKSLKTLQLDYLDLYLIHWPLSSQPGKFSFPIDVADLLPFDVKG 146 (312)
T ss_dssp TSCCGGGCEEEEEECGGG--------CSGGGHHHHHHHHHHHHTCSCBSEEEECCSCEECTTCCCSSEEGGGEECCCHHH
T ss_pred CCCcchheEEEeccCCCC--------CCHHHHHHHHHHHHHHhCCCceeEEEEeccCcccCccccccccccccccccHHH
Confidence 4799999999998643 67899999999999999999999999999964 246889
Q ss_pred HHHHHHHHhHcCccccccceeeccchhHHHHHHHhcCC--Ceeeec
Q 030178 138 TVISLSLLPSFVKLKCSILYCGVVALVAKQMLLLFTNI--DFFIYQ 181 (182)
Q Consensus 138 ~~~al~~l~~~G~ir~~~~~iGvs~~~~~~~~~l~~~~--~~~~~q 181 (182)
+|++|++|+++|+||+ ||||||+.++++++++.. +++.+|
T Consensus 147 ~~~ale~l~~~Gkir~----iGvSn~~~~~l~~~~~~~~~~p~~~Q 188 (312)
T 1zgd_A 147 VWESMEESLKLGLTKA----IGVSNFSVKKLENLLSVATVLPAVNQ 188 (312)
T ss_dssp HHHHHHHHHHTTSBSC----EEEESCCHHHHHHHHTTCSSCCSEEE
T ss_pred HHHHHHHHHHcCCCCE----EEEeCCCHHHHHHHHHhCCCCceEEe
Confidence 9999999999999997 999999999999999743 445555
No 25
>3o3r_A Aldo-keto reductase family 1, member B7; aldose reductase like protein, AKR1B14, oxidoreductase; HET: NAP; 1.86A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 3qkz_A*
Probab=100.00 E-value=2.2e-40 Score=268.98 Aligned_cols=155 Identities=21% Similarity=0.253 Sum_probs=138.8
Q ss_pred ccceecCCCCcccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhcc------CC
Q 030178 4 VRRMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKG------GF 77 (182)
Q Consensus 4 m~~~~lg~~g~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~------~~ 77 (182)
|++++| ++|++||.||||||+. +.+++.++++.|+++|||+||||..|| +|+.+|++|+. .+
T Consensus 2 ~~~~~l-~tg~~v~~lglGt~~~--------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~~~~~ 69 (316)
T 3o3r_A 2 TTFVKL-RTKAKMPLVGLGTWKS--------PPGQVKEAVKAAIDAGYRHFDCAYVYQ---NESEVGEAIQEKIKEKAVR 69 (316)
T ss_dssp CCEEEC-TTSCEEESBEEBCTTC--------CTTHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHHHTTSCC
T ss_pred CCeEEC-CCCCEeCCeeeECCcC--------CcHHHHHHHHHHHHcCCCEEEccCccC---CHHHHHHHHHHHHhhCCCC
Confidence 578899 8999999999999975 457799999999999999999999999 79999999986 58
Q ss_pred CCCEEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCC-------------------CCCCHHHH
Q 030178 78 RERAELATKFGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRID-------------------TQTPIEVT 138 (182)
Q Consensus 78 r~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d-------------------~~~~~~~~ 138 (182)
|+++||+||++... .+++.+++++++||++||+||||+|++|||+ +..+++++
T Consensus 70 R~~v~I~TK~~~~~--------~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 141 (316)
T 3o3r_A 70 REDLFIVSKLWSTF--------FEKSLMKEAFQKTLSDLKLDYLDLYLIHWPQGLQAGKEFLPKDSQGKVLMSKSTFLDA 141 (316)
T ss_dssp GGGCEEEEEECGGG--------CSHHHHHHHHHHHHHHHTCSCEEEEEESCSSCBCCSSCSSCBCTTSCBCBCSCCHHHH
T ss_pred hHHcEEEeeeCCCc--------CCHHHHHHHHHHHHHHcCCCeeeEEEEcCCccccCcccccccccccccccccccHHHH
Confidence 99999999998654 6799999999999999999999999999996 34678999
Q ss_pred HHHHHHHhHcCccccccceeeccchhHHHHHHHhcCC----CeeeecC
Q 030178 139 VISLSLLPSFVKLKCSILYCGVVALVAKQMLLLFTNI----DFFIYQL 182 (182)
Q Consensus 139 ~~al~~l~~~G~ir~~~~~iGvs~~~~~~~~~l~~~~----~~~~~q~ 182 (182)
|++|++|+++|+||+ ||||||+.++++++++.. +++.+|+
T Consensus 142 ~~al~~l~~~Gkir~----iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~ 185 (316)
T 3o3r_A 142 WEGMEELVDQGLVKA----LGVSNFNHFQIERLLNKPGLKHKPVTNQV 185 (316)
T ss_dssp HHHHHHHHHTTSEEE----EEEESCCHHHHHHHHTCTTCCSCCCEEEE
T ss_pred HHHHHHHHHcCCCcE----EEEecCCHHHHHHHHHhCCCCCCceEeec
Confidence 999999999999996 999999999999998743 2455663
No 26
>3b3e_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.80A {Bacillus subtilis} PDB: 3b3d_A
Probab=100.00 E-value=2.1e-40 Score=268.34 Aligned_cols=155 Identities=27% Similarity=0.296 Sum_probs=139.6
Q ss_pred CccceecCCCCcccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhcc--CCCCC
Q 030178 3 TVRRMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKG--GFRER 80 (182)
Q Consensus 3 ~m~~~~lg~~g~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~--~~r~~ 80 (182)
.|+|++|+ +|++||+||||||+++ +.+++.++++.|+++|||+||||+.|| +|+.+|++|+. .+|++
T Consensus 39 ~m~~~~L~-~g~~v~~lglGt~~~~-------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~R~~ 107 (310)
T 3b3e_A 39 LKDTVKLH-NGVEMPWFGLGVFKVE-------NGNEATESVKAAIKNGYRSIDTAAIYK---NEEGVGIGIKESGVAREE 107 (310)
T ss_dssp TTCEEECT-TSCEEESBCEECTTCC-------TTHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHSSSCGGG
T ss_pred ccceEECC-CCCeeCceeeeCCcCC-------CHHHHHHHHHHHHHcCCCEEECCCccC---CHHHHHHHHHhcCCCcce
Confidence 39999994 8999999999999862 458899999999999999999999999 79999999996 57999
Q ss_pred EEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCccccccceeec
Q 030178 81 AELATKFGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSILYCGV 160 (182)
Q Consensus 81 ~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~~iGv 160 (182)
++|+||++... .+++.+++++++||++||+||||+|++|||++.. ++++|++|++|+++|+||+ |||
T Consensus 108 v~I~TK~~~~~--------~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~-~~e~~~al~~l~~~Gkir~----iGv 174 (310)
T 3b3e_A 108 LFITSKVWNED--------QGYETTLAAFEKSLERLQLDYLDLYLIHWPGKDK-YKDTWRALEKLYKDGKIRA----IGV 174 (310)
T ss_dssp CEEEEEECGGG--------CSHHHHHHHHHHHHHHHTCSCEEEEEESCCCSSC-HHHHHHHHHHHHHTTSEEE----EEE
T ss_pred EEEEEeCCCCC--------CCHHHHHHHHHHHHHHhCCCeeEEEEeeCCCccc-HHHHHHHHHHHHHcCCcce----Eee
Confidence 99999998643 6799999999999999999999999999998765 8999999999999999996 999
Q ss_pred cchhHHHHHHHhcC--CCeeeec
Q 030178 161 VALVAKQMLLLFTN--IDFFIYQ 181 (182)
Q Consensus 161 s~~~~~~~~~l~~~--~~~~~~q 181 (182)
|||++++++++++. ++.+.+|
T Consensus 175 Sn~~~~~l~~~~~~~~~~p~~~Q 197 (310)
T 3b3e_A 175 SNFQVHHLEELLKDAEIKPMVNQ 197 (310)
T ss_dssp ESCCHHHHHHHHHHCSSCCSEEE
T ss_pred cCCCHHHHHHHHHhcCCCcceee
Confidence 99999999999763 4444555
No 27
>3h7u_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.25A {Arabidopsis thaliana}
Probab=100.00 E-value=1.4e-40 Score=272.02 Aligned_cols=155 Identities=25% Similarity=0.298 Sum_probs=139.0
Q ss_pred CccceecCCCCcccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhcc------C
Q 030178 3 TVRRMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKG------G 76 (182)
Q Consensus 3 ~m~~~~lg~~g~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~------~ 76 (182)
+|+|++| ++|++||+||||||+. +++++.++++.|+++|||+||||+.|| +|+.+|++|++ .
T Consensus 24 ~m~~~~L-~tg~~v~~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---sE~~lG~al~~~~~~g~~ 91 (335)
T 3h7u_A 24 AITFFKL-NTGAKFPSVGLGTWQA--------SPGLVGDAVAAAVKIGYRHIDCAQIYG---NEKEIGAVLKKLFEDRVV 91 (335)
T ss_dssp CCCEEEC-TTSCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHHHHHTTSC
T ss_pred CCceEEc-CCCCEecceeEeCCcC--------CHHHHHHHHHHHHHcCCCEEECCcccC---CHHHHHHHHHHHHhcCCC
Confidence 5999999 5999999999999974 568899999999999999999999999 89999999986 3
Q ss_pred CCCCEEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCCC--------------CCCHHHHHHHH
Q 030178 77 FRERAELATKFGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDT--------------QTPIEVTVISL 142 (182)
Q Consensus 77 ~r~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~--------------~~~~~~~~~al 142 (182)
+|+++||+||++... .+++.+++++++||++||++|||+|++|||++ ..+++++|++|
T Consensus 92 ~R~~v~I~TK~~~~~--------~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~e~~~aL 163 (335)
T 3h7u_A 92 KREDLFITSKLWCTD--------HDPQDVPEALNRTLKDLQLEYVDLYLIHWPARIKKGSVGIKPENLLPVDIPSTWKAM 163 (335)
T ss_dssp CGGGCEEEEEECGGG--------CSTTHHHHHHHHHHHHHTCSCBSEEEECSSCEECSSCSSCCGGGEECCCHHHHHHHH
T ss_pred CcceeEEEeeeCCCC--------CCHHHHHHHHHHHHHHcCCCceeEEEEcCCCccccccccccccccccCCHHHHHHHH
Confidence 799999999998643 67889999999999999999999999999964 24689999999
Q ss_pred HHHhHcCccccccceeeccchhHHHHHHHhcC--CCeeeec
Q 030178 143 SLLPSFVKLKCSILYCGVVALVAKQMLLLFTN--IDFFIYQ 181 (182)
Q Consensus 143 ~~l~~~G~ir~~~~~iGvs~~~~~~~~~l~~~--~~~~~~q 181 (182)
++|+++|+||+ ||||||++++++++++. .+++.+|
T Consensus 164 ~~l~~~Gkir~----iGvSn~~~~~l~~~~~~~~~~~~~~Q 200 (335)
T 3h7u_A 164 EALYDSGKARA----IGVSNFSTKKLADLLELARVPPAVNQ 200 (335)
T ss_dssp HHHHHTTSBSS----EEEESCCHHHHHHHHHHCSSCCSEEE
T ss_pred HHHHHcCCccE----EEecCCCHHHHHHHHHhCCCCeEEEe
Confidence 99999999997 99999999999999863 3445555
No 28
>3buv_A 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reductase, catalytic tetrad, hepes, NADP, bIle catabolism, disease mutation, lipid metabolism; HET: NAP EPE; 1.35A {Homo sapiens} PDB: 3bur_A* 3bv7_A* 3caq_A* 3cas_A* 3cav_A* 3g1r_A* 3cot_A* 3dop_A* 3cmf_A* 3uzx_A* 3uzw_A* 3uzy_A* 3uzz_A*
Probab=100.00 E-value=3.9e-40 Score=268.57 Aligned_cols=159 Identities=24% Similarity=0.288 Sum_probs=141.2
Q ss_pred CccceecCCCCcccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhcc------C
Q 030178 3 TVRRMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKG------G 76 (182)
Q Consensus 3 ~m~~~~lg~~g~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~------~ 76 (182)
.|++++| ++|++||.||||||++|. ..+++++.++++.|+++|||+||||..|| +|+.+|++|+. .
T Consensus 6 ~~~~~~L-~tg~~v~~lglGt~~~g~----~~~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~~ 77 (326)
T 3buv_A 6 ASHRIPL-SDGNSIPIIGLGTYSEPK----STPKGACATSVKVAIDTGYRHIDGAYIYQ---NEHEVGEAIREKIAEGKV 77 (326)
T ss_dssp SCCEEEC-TTSCEEESBCEECCCCGG----GCCTTHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSC
T ss_pred CCCeEEC-CCCCeeCCeeEcccCCCC----CCCHHHHHHHHHHHHHcCCCEEECccccC---CHHHHHHHHHHHHhcCCC
Confidence 5899999 899999999999998752 23667899999999999999999999999 79999999986 5
Q ss_pred CCCCEEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCCC-------------------CCCHHH
Q 030178 77 FRERAELATKFGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDT-------------------QTPIEV 137 (182)
Q Consensus 77 ~r~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~-------------------~~~~~~ 137 (182)
+|++++|+||++... .+++.+++++++||++||+||||+|++|||+. ..++++
T Consensus 78 ~R~~~~i~TK~~~~~--------~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e 149 (326)
T 3buv_A 78 RREDIFYCGKLWATN--------HVPEMVRPTLERTLRVLQLDYVDLYIIEVPMAFKPGDEIYPRDENGKWLYHKSNLCA 149 (326)
T ss_dssp CGGGCEEEEEECGGG--------CSHHHHHHHHHHHHHHHTCSCEEEEEESCSCCBCCSSCSSCBCTTCCBCBCCCCHHH
T ss_pred ChhHeEEEeeeCCCc--------CCHHHHHHHHHHHHHHhCCCceeEEEEccCCccCCccccCccccccccccccccHHH
Confidence 799999999998643 67999999999999999999999999999964 236789
Q ss_pred HHHHHHHHhHcCccccccceeeccchhHHHHHHHhcCCC----eeeec
Q 030178 138 TVISLSLLPSFVKLKCSILYCGVVALVAKQMLLLFTNID----FFIYQ 181 (182)
Q Consensus 138 ~~~al~~l~~~G~ir~~~~~iGvs~~~~~~~~~l~~~~~----~~~~q 181 (182)
+|++|++|+++|+||+ ||||||+.++++++++..+ .+.+|
T Consensus 150 ~~~ale~l~~~Gkir~----iGvSn~~~~~l~~~~~~~~~~~~p~~~Q 193 (326)
T 3buv_A 150 TWEAMEACKDAGLVKS----LGVSNFNRRQLELILNKPGLKHKPVSNQ 193 (326)
T ss_dssp HHHHHHHHHHTTSEEE----EEEESCCHHHHHHHHTCTTCCSCCCEEE
T ss_pred HHHHHHHHHHcCCccE----EEEeCCCHHHHHHHHHhCCCCCCCeeee
Confidence 9999999999999996 9999999999999997543 34555
No 29
>1s1p_A Aldo-keto reductase family 1 member C3; TIM-barrel, oxidoreductase; HET: NAP; 1.20A {Homo sapiens} SCOP: c.1.7.1 PDB: 1s1r_A* 1s2a_A* 1s2c_A* 3uwe_A* 3r58_A* 3r43_A* 3r7m_A* 3r6i_A* 3r8h_A* 3r94_A* 3r8g_A* 1zq5_A* 1ry8_A* 1xf0_A* 1ry0_A* 2f38_A* 2fgb_A* 4dbs_A* 4dbu_A* 3gug_A* ...
Probab=100.00 E-value=5e-40 Score=268.43 Aligned_cols=159 Identities=23% Similarity=0.321 Sum_probs=139.3
Q ss_pred CccceecCCCCcccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhcc------C
Q 030178 3 TVRRMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKG------G 76 (182)
Q Consensus 3 ~m~~~~lg~~g~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~------~ 76 (182)
++++++| ++|++||.||||||.++ ..+++++.++++.|+++|||+||||+.|| +|+.+|++|+. .
T Consensus 4 ~~~~~~L-~tg~~v~~lglGt~~~~-----~~~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~~~~ 74 (331)
T 1s1p_A 4 KQQCVKL-NDGHFMPVLGFGTYAPP-----EVPRSKALEVTKLAIEAGFRHIDSAHLYN---NEEQVGLAIRSKIADGSV 74 (331)
T ss_dssp --CEEEC-TTSCEEESEEEECCCCT-----TSCTTHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSC
T ss_pred CCCeEEC-CCCCEeCCeeEcCccCC-----CCCHHHHHHHHHHHHHcCCCEEEcccccc---CHHHHHHHHHHHHhcCCC
Confidence 4789999 89999999999999763 23567899999999999999999999999 79999999986 4
Q ss_pred CCCCEEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCCC-------------------CCCHHH
Q 030178 77 FRERAELATKFGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDT-------------------QTPIEV 137 (182)
Q Consensus 77 ~r~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~-------------------~~~~~~ 137 (182)
+|++++|+||++... .+++.+++++++||++||+||||+|++|||+. ..++++
T Consensus 75 ~R~~~~I~TK~~~~~--------~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~d~~g~~~~~~~~~~e 146 (331)
T 1s1p_A 75 KREDIFYTSKLWSTF--------HRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPGEELSPTDENGKVIFDIVDLCT 146 (331)
T ss_dssp CGGGCEEEEEECGGG--------CSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCSSCSSCBCTTSCBCBCCCCHHH
T ss_pred CchheEEEeccCCcc--------CCHHHHHHHHHHHHHHhCCCcEEEEEeccCcccCCCcccCCccccccccccccCHHH
Confidence 799999999998643 67999999999999999999999999999943 236789
Q ss_pred HHHHHHHHhHcCccccccceeeccchhHHHHHHHhcCCCe----eeecC
Q 030178 138 TVISLSLLPSFVKLKCSILYCGVVALVAKQMLLLFTNIDF----FIYQL 182 (182)
Q Consensus 138 ~~~al~~l~~~G~ir~~~~~iGvs~~~~~~~~~l~~~~~~----~~~q~ 182 (182)
+|++|++|+++|+||+ ||||||+.++++++++..++ +.+|+
T Consensus 147 ~~~ale~l~~~Gkir~----iGvSn~~~~~l~~~~~~~~~~~~p~v~Q~ 191 (331)
T 1s1p_A 147 TWEAMEKCKDAGLAKS----IGVSNFNRRQLEMILNKPGLKYKPVCNQV 191 (331)
T ss_dssp HHHHHHHHHHTTSEEE----EEEESCCHHHHHHHHTCTTCCCCCSEEEE
T ss_pred HHHHHHHHHHcCCccE----EEEeCCCHHHHHHHHHhcCccCCCceeee
Confidence 9999999999999997 99999999999999985443 55653
No 30
>4f40_A Prostaglandin F2-alpha synthase/D-arabinose dehyd; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CIT; 1.60A {Leishmania major} PDB: 4g5d_A*
Probab=100.00 E-value=3.9e-40 Score=264.45 Aligned_cols=155 Identities=24% Similarity=0.248 Sum_probs=139.0
Q ss_pred ccceecCCCCcccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhcc--CCCCCE
Q 030178 4 VRRMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKG--GFRERA 81 (182)
Q Consensus 4 m~~~~lg~~g~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~--~~r~~~ 81 (182)
+++.+| ++|++||+||||||+++. ++++.++++.|+++|+|+||||+.|| +|+.+|++|+. .+|+++
T Consensus 10 ~~~~~l-~~g~~v~~lglGt~~~~~-------~~~~~~~v~~Al~~G~~~~DTA~~Yg---~E~~vG~al~~~~~~R~~~ 78 (288)
T 4f40_A 10 KAMVTL-SNGVKMPQFGLGVWQSPA-------GEVTENAVKWALCAGYRHIDTAAIYK---NEESVGAGLRASGVPREDV 78 (288)
T ss_dssp TCEEEC-TTSCEEESBCEECTTCCT-------THHHHHHHHHHHHTTCCEEECCGGGT---CHHHHHHHHHHHTCCGGGC
T ss_pred CCeEEC-CCCCeecceeEECCcCCC-------cHHHHHHHHHHHHcCCCeEECccccc---CHHHHHHHHHhcCCChhhE
Confidence 578899 899999999999998742 37899999999999999999999999 89999999987 579999
Q ss_pred EEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCCCC-------CCHHHHHHHHHHHhHcCccccc
Q 030178 82 ELATKFGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQ-------TPIEVTVISLSLLPSFVKLKCS 154 (182)
Q Consensus 82 ~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~-------~~~~~~~~al~~l~~~G~ir~~ 154 (182)
||+||++... .+++.+++++++||++||+||||+|++|||++. .+.+++|++|++|+++|+||+
T Consensus 79 ~I~TK~~~~~--------~~~~~i~~~~~~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~e~~~al~~l~~~Gkir~- 149 (288)
T 4f40_A 79 FITTKLWNTE--------QGYESTLAAFEESRQKLGVDYIDLYLIHWPRGKDILSKEGKKYLDSWRAFEQLYKEKKVRA- 149 (288)
T ss_dssp EEEEEECGGG--------CSHHHHHHHHHHHHHHHTCSCEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHTTSEEE-
T ss_pred EEEEecCCCc--------CCHHHHHHHHHHHHHHhCCCcEEEEEEecCCCCcccccccccHHHHHHHHHHHHHcCCccE-
Confidence 9999998653 678999999999999999999999999999863 567899999999999999996
Q ss_pred cceeeccchhHHHHHHHhcC--CCeeeec
Q 030178 155 ILYCGVVALVAKQMLLLFTN--IDFFIYQ 181 (182)
Q Consensus 155 ~~~iGvs~~~~~~~~~l~~~--~~~~~~q 181 (182)
||||||+.++++++++. .+.+.+|
T Consensus 150 ---iGvSn~~~~~l~~~~~~~~~~~~~~Q 175 (288)
T 4f40_A 150 ---IGVSNFHIHHLEDVLAMCTVTPMVNQ 175 (288)
T ss_dssp ---EEEESCCHHHHHHHHTTCSSCCCEEE
T ss_pred ---EEeccCCHHHHHHHHHhCCCCCeEEe
Confidence 99999999999999873 3444455
No 31
>1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT; 0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A* 1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A* 2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A* 2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ...
Probab=100.00 E-value=9.2e-40 Score=265.31 Aligned_cols=155 Identities=24% Similarity=0.345 Sum_probs=138.5
Q ss_pred ccceecCCCCcccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhcc------CC
Q 030178 4 VRRMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKG------GF 77 (182)
Q Consensus 4 m~~~~lg~~g~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~------~~ 77 (182)
+++++| ++|++||+||||||+. +++++.++++.|+++|+|+||||..|| +|+.+|++|+. .+
T Consensus 2 ~~~~~l-~tg~~v~~lglGt~~~--------~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~~~ 69 (316)
T 1us0_A 2 ASRILL-NNGAKMPILGLGTWKS--------PPGQVTEAVKVAIDVGYRHIDCAHVYQ---NENEVGVAIQEKLREQVVK 69 (316)
T ss_dssp CSEEEC-TTSCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSSC
T ss_pred CceEEC-CCCCEECCEeEECCcC--------CHHHHHHHHHHHHHcCCCEEEcccccC---CHHHHHHHHHHHHhcCCCC
Confidence 358899 8999999999999974 678899999999999999999999999 79999999986 47
Q ss_pred CCCEEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCCC-------------------CCCHHHH
Q 030178 78 RERAELATKFGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDT-------------------QTPIEVT 138 (182)
Q Consensus 78 r~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~-------------------~~~~~~~ 138 (182)
|++++|+||++... .+++.+++++++||++||+||||+|++|||+. ..+++++
T Consensus 70 R~~~~I~TK~~~~~--------~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 141 (316)
T 1us0_A 70 REELFIVSKLWCTY--------HEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILDT 141 (316)
T ss_dssp GGGCEEEEEECGGG--------CSHHHHHHHHHHHHHHHTCSCBSEEEESSSCCBCCSSCSSCBCTTSCBCBCSCCHHHH
T ss_pred hhHeEEEEeeCCCc--------CCHHHHHHHHHHHHHHhCCCceeeEEEecCccccccccccccccccccccccccHHHH
Confidence 99999999998643 67999999999999999999999999999964 2367899
Q ss_pred HHHHHHHhHcCccccccceeeccchhHHHHHHHhcCCCe----eeecC
Q 030178 139 VISLSLLPSFVKLKCSILYCGVVALVAKQMLLLFTNIDF----FIYQL 182 (182)
Q Consensus 139 ~~al~~l~~~G~ir~~~~~iGvs~~~~~~~~~l~~~~~~----~~~q~ 182 (182)
|++|++|+++|+||+ ||||||+.++++++++..++ +.+|+
T Consensus 142 ~~ale~l~~~Gkir~----iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~ 185 (316)
T 1us0_A 142 WAAMEELVDEGLVKA----IGISNFNHLQVEMILNKPGLKYKPAVNQI 185 (316)
T ss_dssp HHHHHHHHHTTSBSC----EEEESCCHHHHHHHHTCTTCCSCCSEEEE
T ss_pred HHHHHHHHHCCCccE----EEEecCCHHHHHHHHHhCcccCCceeeeh
Confidence 999999999999997 99999999999999985444 55663
No 32
>1mzr_A 2,5-diketo-D-gluconate reductase A; alpha/beta-barrel, aldo-ketoreductase, NADPH dependant, BACT targets at IGS-CNRS, france, BIGS; 2.13A {Escherichia coli} SCOP: c.1.7.1
Probab=100.00 E-value=5.1e-40 Score=264.55 Aligned_cols=154 Identities=28% Similarity=0.280 Sum_probs=137.9
Q ss_pred CCccceecCCCCcccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhcc--CCCC
Q 030178 2 ATVRRMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKG--GFRE 79 (182)
Q Consensus 2 ~~m~~~~lg~~g~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~--~~r~ 79 (182)
.+|++++| ++|++||+||||||++ +.+++.++++.|+++|+|+||||+.|| +|+.+|++|++ .+|+
T Consensus 23 ~~~~~~~L-~tg~~vs~lglGt~~~--------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg---~E~~vG~al~~~~~~R~ 90 (296)
T 1mzr_A 23 ANPTVIKL-QDGNVMPQLGLGVWQA--------SNEEVITAIQKALEVGYRSIDTAAAYK---NEEGVGKALKNASVNRE 90 (296)
T ss_dssp CCCCEEEC-TTSCEEESBCEECCSC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHSCSCGG
T ss_pred CCCceEEC-CCCCeeCCEeEECCCC--------CHHHHHHHHHHHHHcCCCEEECCcccc---CHHHHHHHHHhcCCCcc
Confidence 37999999 7999999999999986 358899999999999999999999999 79999999986 5799
Q ss_pred CEEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCCC-CCCHHHHHHHHHHHhHcCcccccccee
Q 030178 80 RAELATKFGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDT-QTPIEVTVISLSLLPSFVKLKCSILYC 158 (182)
Q Consensus 80 ~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~-~~~~~~~~~al~~l~~~G~ir~~~~~i 158 (182)
+++|+||++... . +.+++++++||++||+||||+|++|||++ ..+.+++|++|++|+++|+||+ |
T Consensus 91 ~v~I~TK~~~~~--------~--~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~e~~~al~~l~~~Gkir~----i 156 (296)
T 1mzr_A 91 ELFITTKLWNDD--------H--KRPREALLDSLKKLQLDYIDLYLMHWPVPAIDHYVEAWKGMIELQKEGLIKS----I 156 (296)
T ss_dssp GCEEEEEECGGG--------T--TCHHHHHHHHHHHHTCSCEEEEEESCCCTTTCCHHHHHHHHHHHHHTTSEEE----E
T ss_pred cEEEEeccCCCc--------H--HHHHHHHHHHHHHhCCCcEEEEEEccCCCCcCCHHHHHHHHHHHHHCCCcCE----E
Confidence 999999998642 2 67999999999999999999999999987 4788999999999999999996 9
Q ss_pred eccchhHHHHHHHhc--CCCeeeec
Q 030178 159 GVVALVAKQMLLLFT--NIDFFIYQ 181 (182)
Q Consensus 159 Gvs~~~~~~~~~l~~--~~~~~~~q 181 (182)
|||||++++++++++ .++.+.+|
T Consensus 157 GvSn~~~~~l~~~~~~~~~~p~v~Q 181 (296)
T 1mzr_A 157 GVCNFQIHHLQRLIDETGVTPVINQ 181 (296)
T ss_dssp EEESCCHHHHHHHHHHHSCCCSEEE
T ss_pred EEeCCCHHHHHHHHHhcCCCceEEe
Confidence 999999999999986 34434455
No 33
>3h7r_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.40A {Arabidopsis thaliana}
Probab=100.00 E-value=6.1e-40 Score=267.91 Aligned_cols=151 Identities=27% Similarity=0.352 Sum_probs=135.0
Q ss_pred CccceecCCCCcccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhcc------C
Q 030178 3 TVRRMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKG------G 76 (182)
Q Consensus 3 ~m~~~~lg~~g~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~------~ 76 (182)
+|++++| ++|++||+||||||+ ++.++++.|+++|||+||||+.|| +|+.+|++|++ .
T Consensus 24 ~m~~~~L-~tg~~vs~lglGt~~------------~~~~~v~~Al~~Gi~~~DTA~~Yg---sE~~lG~al~~~~~~g~~ 87 (331)
T 3h7r_A 24 PIRFFEL-NTGAKLPCVGLGTYA------------MVATAIEQAIKIGYRHIDCASIYG---NEKEIGGVLKKLIGDGFV 87 (331)
T ss_dssp -CCEEEC-TTSCEEESBEEECTT------------CCHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHHHHHTTSS
T ss_pred CCcEEEC-CCCCEecCEeeccHH------------HHHHHHHHHHHcCCCEEECccccC---CHHHHHHHHHHHhhcCCC
Confidence 6999999 799999999999984 467999999999999999999999 89999999986 3
Q ss_pred CCCCEEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCCC--------------CCCHHHHHHHH
Q 030178 77 FRERAELATKFGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDT--------------QTPIEVTVISL 142 (182)
Q Consensus 77 ~r~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~--------------~~~~~~~~~al 142 (182)
+|+++||+||++... .+++.+++++++||++||+||||+|++|||++ ..+++++|++|
T Consensus 88 ~R~~v~I~TK~~~~~--------~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~e~~~aL 159 (331)
T 3h7r_A 88 KREELFITSKLWSND--------HLPEDVPKALEKTLQDLQIDYVDLYLIHWPASLKKESLMPTPEMLTKPDITSTWKAM 159 (331)
T ss_dssp CGGGCEEEEEECGGG--------CSTTHHHHHHHHHHHHHTCSCBSEEEECCSCEECTTCSSCCGGGEECCCHHHHHHHH
T ss_pred CchhEEEEEeeCCCC--------CCHHHHHHHHHHHHHHcCCCeeEEEEEecCcccccccccccccccccCCHHHHHHHH
Confidence 899999999998643 67889999999999999999999999999964 35689999999
Q ss_pred HHHhHcCccccccceeeccchhHHHHHHHhcC--CCeeeec
Q 030178 143 SLLPSFVKLKCSILYCGVVALVAKQMLLLFTN--IDFFIYQ 181 (182)
Q Consensus 143 ~~l~~~G~ir~~~~~iGvs~~~~~~~~~l~~~--~~~~~~q 181 (182)
++|+++|+||+ ||||||+.++++++++. .+++.+|
T Consensus 160 ~~l~~~Gkir~----iGvSn~~~~~l~~~~~~~~~~~~~~Q 196 (331)
T 3h7r_A 160 EALYDSGKARA----IGVSNFSSKKLTDLLNVARVTPAVNQ 196 (331)
T ss_dssp HHHHHTTSBSS----EEEESCCHHHHHHHHHHCSSCCSEEE
T ss_pred HHHHHcCCCcE----EEecCCCHHHHHHHHHhcCCCceeEE
Confidence 99999999997 99999999999999873 3445555
No 34
>1vp5_A 2,5-diketo-D-gluconic acid reductase; TM1009, structural genomics, joint center for structural genomics, PSI, protein structure initiative; HET: NAP; 2.40A {Thermotoga maritima} SCOP: c.1.7.1
Probab=100.00 E-value=2.7e-39 Score=260.51 Aligned_cols=152 Identities=23% Similarity=0.274 Sum_probs=135.3
Q ss_pred cceecCCCCcccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhcc------CCC
Q 030178 5 RRMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKG------GFR 78 (182)
Q Consensus 5 ~~~~lg~~g~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~------~~r 78 (182)
+.+.+|++|++||+||||||++ +.+++.++++.|++.|+|+||||+.|| +|+.+|++|+. .+|
T Consensus 15 ~~~~~~~tg~~v~~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~vG~al~~~~~~~~~~R 83 (298)
T 1vp5_A 15 VPKVTLNNGVEMPILGYGVFQI--------PPEKTEECVYEAIKVGYRLIDTAASYM---NEEGVGRAIKRAIDEGIVRR 83 (298)
T ss_dssp CCEEECTTSCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSCCG
T ss_pred CceEeCCCCCCccCeeEeCCcC--------ChHHHHHHHHHHHHcCCCEEECCCccc---CHHHHHHHHHHhhhccCCCh
Confidence 3456779999999999999976 347899999999999999999999999 79999999984 479
Q ss_pred CCEEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCcccccccee
Q 030178 79 ERAELATKFGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSILYC 158 (182)
Q Consensus 79 ~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~~i 158 (182)
++++|+||++... .+++.+++++++||++||+||||+|++|||++ +.+++|++|++|+++|+||+ |
T Consensus 84 ~~v~I~TK~~~~~--------~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~--~~~e~~~al~~l~~~Gkir~----i 149 (298)
T 1vp5_A 84 EELFVTTKLWVSD--------VGYESTKKAFEKSLKKLQLEYIDLYLIHQPFG--DVHCAWKAMEEMYKDGLVRA----I 149 (298)
T ss_dssp GGCEEEEEECGGG--------CSSHHHHHHHHHHHHHHTCSCEEEEEECSSCS--CHHHHHHHHHHHHHTTSEEE----E
T ss_pred hhEEEEeccCCCC--------CCHHHHHHHHHHHHHHHCCCcEEEEEecCCCC--CHHHHHHHHHHHHHcCCccE----E
Confidence 9999999997642 67899999999999999999999999999987 78999999999999999996 9
Q ss_pred eccchhHHHHHHHhcCCCe--eeec
Q 030178 159 GVVALVAKQMLLLFTNIDF--FIYQ 181 (182)
Q Consensus 159 Gvs~~~~~~~~~l~~~~~~--~~~q 181 (182)
|||||++++++++++...+ +.+|
T Consensus 150 GvSn~~~~~l~~~~~~~~~~p~v~Q 174 (298)
T 1vp5_A 150 GVSNFYPDRLMDLMVHHEIVPAVNQ 174 (298)
T ss_dssp EEESCCHHHHHHHHHHCSSCCSEEE
T ss_pred EecCCCHHHHHHHHHhCCCCceEEE
Confidence 9999999999999874333 4455
No 35
>3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, oxidoreductase, S genomics; HET: NAP; 1.75A {Giardia lamblia}
Probab=100.00 E-value=4e-39 Score=263.40 Aligned_cols=159 Identities=23% Similarity=0.309 Sum_probs=132.8
Q ss_pred CCCccceecC-CCCcccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhc-----
Q 030178 1 MATVRRMKLG-SQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFK----- 74 (182)
Q Consensus 1 ~~~m~~~~lg-~~g~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~----- 74 (182)
|.+++-..+| ++|.+||.||||||+. +++++.++++.|+++|||+||||+.|| +|+.+|++|+
T Consensus 9 ~~~~~~~~~~~~tg~~vp~lGlGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---sE~~vG~al~~~~~~ 77 (334)
T 3krb_A 9 MGTLEAQTQGPGSMQYPPRLGFGTWQA--------PPEAVQTAVETALMTGYRHIDCAYVYQ---NEEAIGRAFGKIFKD 77 (334)
T ss_dssp ------------CCSSCCSBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHHHHHC
T ss_pred ccceecCCcCCCCCCccCCeeeeCCCC--------CHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHHhhh
Confidence 3444444443 6799999999999974 678899999999999999999999999 8999999998
Q ss_pred ---cCCCCCEEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCCC--------------C-----
Q 030178 75 ---GGFRERAELATKFGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDT--------------Q----- 132 (182)
Q Consensus 75 ---~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~--------------~----- 132 (182)
..+|+++||+||++... .+++.+++++++||++||+||||+|++|||++ .
T Consensus 78 ~~~g~~R~~v~I~TK~~~~~--------~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~d~~g~~~~ 149 (334)
T 3krb_A 78 ASSGIKREDVWITSKLWNYN--------HRPELVREQCKKTMSDLQVDYLDLFLVHWPLAFVRNDVGDLFPKDAEGRAML 149 (334)
T ss_dssp TTSSCCGGGCEEEEEECGGG--------CSGGGHHHHHHHHHHHHTCSCEEEEEECCSCCBCCCTTCCSSCBCTTSCBCB
T ss_pred ccCCCChhhEEEEeeeCCCC--------CCHHHHHHHHHHHHHHcCCCceeEEEEccccccccccccccCcccccccccc
Confidence 45899999999998653 67899999999999999999999999999943 2
Q ss_pred --CCHHHHHHHHHHHhHcCccccccceeeccchhHHHHHHHhcCC--CeeeecC
Q 030178 133 --TPIEVTVISLSLLPSFVKLKCSILYCGVVALVAKQMLLLFTNI--DFFIYQL 182 (182)
Q Consensus 133 --~~~~~~~~al~~l~~~G~ir~~~~~iGvs~~~~~~~~~l~~~~--~~~~~q~ 182 (182)
.+++++|++|++|+++|+||+ ||||||++++++++++.. +++.+|+
T Consensus 150 ~~~~~~e~~~al~~l~~~Gkir~----iGvSn~~~~~l~~~~~~~~~~~~~~Q~ 199 (334)
T 3krb_A 150 EKVPLADTWRAMEQLVEEGLVKH----IGVSNYTVPLLADLLNYAKIKPLVNQI 199 (334)
T ss_dssp CCCCHHHHHHHHHHHHHHTSEEE----EEEESCCHHHHHHHHHHCSSCCSEEEE
T ss_pred cCCCHHHHHHHHHHHHHcCCccE----EEEecCCHHHHHHHHHhCCCceEEeee
Confidence 568899999999999999996 999999999999998733 4555663
No 36
>4gac_A Alcohol dehydrogenase [NADP(+)]; TIM barrel, aldheyde reductase AKR1A4, SMAR1, oxidoreductase; HET: FLC; 1.64A {Mus musculus} PDB: 2alr_A 3h4g_A* 3cv7_A* 3fx4_A* 1ae4_A* 1cwn_A* 1hqt_A*
Probab=100.00 E-value=2e-38 Score=257.95 Aligned_cols=154 Identities=25% Similarity=0.319 Sum_probs=136.9
Q ss_pred ccceecCCCCcccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhcc-------C
Q 030178 4 VRRMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKG-------G 76 (182)
Q Consensus 4 m~~~~lg~~g~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~-------~ 76 (182)
.+++.| |||++||.||||||+. +++++.++++.|+++|+|+||||+.|| +|+.+|++|++ .
T Consensus 2 ~~~v~L-ntG~~vp~iGlGtw~~--------~~~~a~~~i~~Al~~Gin~~DTA~~Yg---sE~~vG~al~~~~~~~~~~ 69 (324)
T 4gac_A 2 ASSVLL-HTGQKMPLIGLGTWKS--------EPGQVKAAIKHALSAGYRHIDCASVYG---NETEIGEALKESVGSGKAV 69 (324)
T ss_dssp CCEEEC-TTSCEEESBCEECTTC--------CHHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHBSTTSSB
T ss_pred CCeEEC-CCCCEeccceeECCCC--------CHHHHHHHHHHHHHcCCCEEECCcccC---CHHHHHHHHHhhhccccee
Confidence 467888 9999999999999975 678899999999999999999999999 89999999986 4
Q ss_pred CCCCEEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCCC-------------------CCCHHH
Q 030178 77 FRERAELATKFGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDT-------------------QTPIEV 137 (182)
Q Consensus 77 ~r~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~-------------------~~~~~~ 137 (182)
+|+++++.+|.+... .+++.+++++++||++||+||||+|++|||++ ..+++|
T Consensus 70 ~r~~~~~~~~~~~~~--------~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e 141 (324)
T 4gac_A 70 PREELFVTSKLWNTK--------HHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNADGTVRYDSTHYKE 141 (324)
T ss_dssp CGGGCEEEEEECGGG--------CSHHHHHHHHHHHHHHHTCSCBSEEEESCSSEECSSSCSSCBCTTSCBCEECCCHHH
T ss_pred cccccccccccCCCC--------CCHHHHHHHHHHHHHHhCCCccceeeeccCcccccccccccccccCccccCCCCHHH
Confidence 688899999987654 77899999999999999999999999999963 456899
Q ss_pred HHHHHHHHhHcCccccccceeeccchhHHHHHHHhcC--CCeeeec
Q 030178 138 TVISLSLLPSFVKLKCSILYCGVVALVAKQMLLLFTN--IDFFIYQ 181 (182)
Q Consensus 138 ~~~al~~l~~~G~ir~~~~~iGvs~~~~~~~~~l~~~--~~~~~~q 181 (182)
+|++|++|+++|+||+ ||||||++++++++... .+.+.+|
T Consensus 142 ~~~al~~l~~~Gkir~----iGvSn~~~~~l~~~~~~~~~~~~~~q 183 (324)
T 4gac_A 142 TWKALEVLVAKGLVKA----LGLSNFNSRQIDDVLSVASVRPAVLQ 183 (324)
T ss_dssp HHHHHHHHHHTTSBSC----EEEESCCHHHHHHHHHHCSSCCCEEE
T ss_pred HHHHHHHHHHCCCeeE----ecCCCCCHHHHHHHHHhCCCCcceee
Confidence 9999999999999996 99999999999998873 3334444
No 37
>1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A*
Probab=100.00 E-value=1.4e-38 Score=259.32 Aligned_cols=154 Identities=31% Similarity=0.302 Sum_probs=135.7
Q ss_pred ccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhcc--CCCCCEEEEeccCCCcC
Q 030178 15 EVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKG--GFRERAELATKFGIGIV 92 (182)
Q Consensus 15 ~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~--~~r~~~~i~tK~~~~~~ 92 (182)
.+|+||||||++|. ..+++++.++|+.|+++|||+||||+.||+|.+|+.+|++|+. ..|++++|+||+++..
T Consensus 4 ~~~~lglGt~~~g~----~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~r~~~~i~TK~~~~~- 78 (327)
T 1gve_A 4 ARPATVLGAMEMGR----RMDVTSSSASVRAFLQRGHTEIDTAFVYANGQSETILGDLGLGLGRSGCKVKIATKAAPMF- 78 (327)
T ss_dssp CCCEEEEECTTBTT----TBCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHTTSCCCTTSTTCCSEEEEEECSCT-
T ss_pred CCCCeEEcccccCC----CCCHHHHHHHHHHHHHcCCCEEEchhhcCCCchHHHHHHHHhhcCCCCCeEEEEEEECCCC-
Confidence 57899999999864 2477889999999999999999999999988999999999986 2477899999996431
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCccccccceeeccchhHHHHHHHh
Q 030178 93 DGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSILYCGVVALVAKQMLLLF 172 (182)
Q Consensus 93 ~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~~iGvs~~~~~~~~~l~ 172 (182)
....+++.+++++++||++||+||||+|++|||++..+++++|++|++|+++|+||+ ||||||+.+++++++
T Consensus 79 ----~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~----iGvSn~~~~~l~~~~ 150 (327)
T 1gve_A 79 ----GKTLKPADVRFQLETSLKRLQCPRVDLFYLHFPDHGTPIEETLQACHQLHQEGKFVE----LGLSNYVSWEVAEIC 150 (327)
T ss_dssp ----TCCSSHHHHHHHHHHHHHHTTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEE----EEEESCCHHHHHHHH
T ss_pred ----CCCCCHHHHHHHHHHHHHHHCCCeEeEEEecCCCCCCCHHHHHHHHHHHHhCCceeE----EEecCCCHHHHHHHH
Confidence 124789999999999999999999999999999999999999999999999999996 999999999998887
Q ss_pred cC------CCeeeec
Q 030178 173 TN------IDFFIYQ 181 (182)
Q Consensus 173 ~~------~~~~~~q 181 (182)
+. .+++.+|
T Consensus 151 ~~~~~~g~~~~~~~Q 165 (327)
T 1gve_A 151 TLCKKNGWIMPTVYQ 165 (327)
T ss_dssp HHHHHHTCCCEEEEE
T ss_pred HHHHHcCCCCeEEEe
Confidence 52 3456566
No 38
>2bp1_A Aflatoxin B1 aldehyde reductase member 2; oxidoreductase, aldo-keto reductase family 7, SSA reductase, barrel; HET: FLC NDP; 2.4A {Homo sapiens}
Probab=100.00 E-value=2e-38 Score=261.60 Aligned_cols=159 Identities=30% Similarity=0.270 Sum_probs=135.2
Q ss_pred CCCcccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhcc--CCCCCEEEEeccC
Q 030178 11 SQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKG--GFRERAELATKFG 88 (182)
Q Consensus 11 ~~g~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~--~~r~~~~i~tK~~ 88 (182)
..+..+|+||||||++|. ..+++++.++|+.|+++|||+||||+.||.|.+|+.+|++|++ ..|++++|+||++
T Consensus 33 ~~~~~ip~lglGt~~~g~----~~~~~~~~~~l~~Al~~Gin~~DTA~~Yg~G~sE~~lG~al~~~~~~r~~v~I~TK~~ 108 (360)
T 2bp1_A 33 RPPPPRVASVLGTMEMGR----RMDAPASAAAVRAFLERGHTELDTAFMYSDGQSETILGGLGLGLGGGDCRVKIATKAN 108 (360)
T ss_dssp -----CCEEEEECTTBTT----TBCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHTSCCCTTSTTCCCEEEEEEC
T ss_pred CCCCCCCCEEECchhhCC----CCCHHHHHHHHHHHHHcCCCEEECccccCCCChHHHHHHHHhhccCCCCeEEEEeeec
Confidence 346779999999999864 3477889999999999999999999999988999999999974 2356799999996
Q ss_pred CCcCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCccccccceeeccchhHHHH
Q 030178 89 IGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSILYCGVVALVAKQM 168 (182)
Q Consensus 89 ~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~~iGvs~~~~~~~ 168 (182)
+... ...+++.+++++++||++||+||||+|++|||++..+++++|++|++|+++|+||+ ||||||+.+++
T Consensus 109 ~~~~-----~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~aL~~l~~~Gkir~----iGvSn~~~~~l 179 (360)
T 2bp1_A 109 PWDG-----KSLKPDSVRSQLETSLKRLQCPQVDLFYLHAPDHGTPVEETLHACQRLHQEGKFVE----LGLSNYASWEV 179 (360)
T ss_dssp CCTT-----CCSSHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEE----EEEESCCHHHH
T ss_pred CCCC-----CCCCHHHHHHHHHHHHHHhCCCeEeEEEecCCCCCCCHHHHHHHHHHHHHCCCccE----EEEeCCCHHHH
Confidence 4311 24789999999999999999999999999999999999999999999999999996 99999999999
Q ss_pred HHHhcC------CCeeeecC
Q 030178 169 LLLFTN------IDFFIYQL 182 (182)
Q Consensus 169 ~~l~~~------~~~~~~q~ 182 (182)
+++++. .+++.+|+
T Consensus 180 ~~~~~~~~~~g~~~~~~~Q~ 199 (360)
T 2bp1_A 180 AEICTLCKSNGWILPTVYQG 199 (360)
T ss_dssp HHHHHHHHHHTCCCEEEEEE
T ss_pred HHHHHHHHHcCCCCceEEee
Confidence 888752 45666663
No 39
>3b3d_A YTBE protein, putative morphine dehydrogenase; aldo-keto reductase, oxidoreductase; 2.30A {Bacillus subtilis}
Probab=100.00 E-value=3.8e-38 Score=255.66 Aligned_cols=153 Identities=26% Similarity=0.299 Sum_probs=137.3
Q ss_pred cceecCCCCcccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhcc------CCC
Q 030178 5 RRMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKG------GFR 78 (182)
Q Consensus 5 ~~~~lg~~g~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~------~~r 78 (182)
.+.+| |+|++||.||||||+++ +.+++.++++.|+++|||+||||+.|| +|+.+|+++++ ++|
T Consensus 41 ~~~TL-n~G~~ip~lGlGt~~~~-------d~~e~~~~v~~Al~~Gi~~~DTA~~Yg---nE~~vG~~l~~~~~~~~i~r 109 (314)
T 3b3d_A 41 AKATL-HNGVEMPWFGLGVFQVE-------EGSELVNAVKTAIVHGYRSIDTAAIYG---NEAGVGEGIREGIEEAGISR 109 (314)
T ss_dssp CEEEC-TTSCEEESBCEECCSCC-------CSHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHHHTCCG
T ss_pred CcEEC-CCcCcccceeEECCCCC-------CHHHHHHHHHHHHHcCCCEEECccccC---ChHHHHHHHHHHHHHhCCCc
Confidence 57889 89999999999999862 457899999999999999999999999 89999999875 679
Q ss_pred CCEEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCcccccccee
Q 030178 79 ERAELATKFGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSILYC 158 (182)
Q Consensus 79 ~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~~i 158 (182)
+.+++.+|.+... .+++.+++++++||++||+||||+|++|||++ .+..++|++|++|+++|+||+ |
T Consensus 110 ~~~~i~~k~~~~~--------~~~~~~~~~~e~SL~rL~~dyiDL~~~H~~~~-~~~~e~~~al~~l~~~Gkir~----i 176 (314)
T 3b3d_A 110 EDLFITSKVWNAD--------LGYEETLAAFETSLSKLGLDYLDLYLIHWPVE-GKYKEAWRALETLYKEGRIKA----I 176 (314)
T ss_dssp GGCEEEEEECGGG--------CSHHHHHHHHHHHHHHHTCSCEEEEEESSCCT-TTHHHHHHHHHHHHHTTSEEE----E
T ss_pred ccccccccCcCCC--------CCHHHHHHHHHHHHHHhCCCcccccccccccc-cchhHHHHHHHHHHHCCCEeE----E
Confidence 9999999998654 78999999999999999999999999999986 467899999999999999996 9
Q ss_pred eccchhHHHHHHHhcCC--Ceeeec
Q 030178 159 GVVALVAKQMLLLFTNI--DFFIYQ 181 (182)
Q Consensus 159 Gvs~~~~~~~~~l~~~~--~~~~~q 181 (182)
|||||+.++++++.+.. +.+++|
T Consensus 177 GvSn~~~~~l~~~~~~~~i~~~~nq 201 (314)
T 3b3d_A 177 GVSNFQIHHLEDLMTAAEIKPMINQ 201 (314)
T ss_dssp EEESCCHHHHHHHTTTCSSCCSEEE
T ss_pred EecCCchHHHHHHHHhcCCCeEEEE
Confidence 99999999999998854 444555
No 40
>2bgs_A Aldose reductase; holoenzyme, aldo/keto reductase, oxidoreductase; HET: NDP; 1.64A {Hordeum vulgare} PDB: 2bgq_A* 2vdg_A*
Probab=100.00 E-value=2.3e-38 Score=259.73 Aligned_cols=153 Identities=28% Similarity=0.276 Sum_probs=135.5
Q ss_pred c-cceecCCCCcccCcceeccccCCCCCCCCCChHHHHHHHHHHHH-cCCCeeeccCCCCCCcHHHHHHHhhcc-----C
Q 030178 4 V-RRMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAIN-SGITFLDTSDIYGPHTNEILLGKAFKG-----G 76 (182)
Q Consensus 4 m-~~~~lg~~g~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~-~G~~~~Dta~~Yg~g~~e~~lG~~l~~-----~ 76 (182)
| ++++| ++|++||+||||||+. + +++.++++.|++ +|||+||||..|| +|+.+|++|+. .
T Consensus 36 m~~~~~L-~tg~~vp~lglGt~~~--------~-~~~~~~l~~Al~~~Gi~~iDTA~~Yg---~E~~vG~al~~~~~~g~ 102 (344)
T 2bgs_A 36 EQDHFVL-KSGHAMPAVGLGTWRA--------G-SDTAHSVRTAITEAGYRHVDTAAEYG---VEKEVGKGLKAAMEAGI 102 (344)
T ss_dssp -CCEEEC-TTSCEEESBCEECTTC--------G-GGHHHHHHHHHHTTCCCEEECCGGGT---CHHHHHHHHHHHHHTTC
T ss_pred CCceEEC-CCCCccCCeeEeCCCC--------c-HHHHHHHHHHHHhcCCCEEECCCccC---CHHHHHHHHHHhhhcCC
Confidence 6 48899 7999999999999863 4 678999999999 9999999999999 79999999986 5
Q ss_pred CCCCEEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCCC---------------CCCHHHHHHH
Q 030178 77 FRERAELATKFGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDT---------------QTPIEVTVIS 141 (182)
Q Consensus 77 ~r~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~---------------~~~~~~~~~a 141 (182)
+|++++|+||++... .+++.+++++++||++||+||||+|++|||+. ..+++++|++
T Consensus 103 ~R~~v~I~TK~~~~~--------~~~~~v~~ale~SL~rLg~dyIDl~llH~p~~~~~~~~~~~~~~~~~~~~~~e~~~a 174 (344)
T 2bgs_A 103 DRKDLFVTSKIWCTN--------LAPERVRPALENTLKDLQLDYIDLYHIHWPFRLKDGAHMPPEAGEVLEFDMEGVWKE 174 (344)
T ss_dssp CGGGCEEEEEECGGG--------CSHHHHHHHHHHHHHHHTCSCEEEEEESSSCEECTTCCSSCCTTCEECCCHHHHHHH
T ss_pred CcccEEEEeccCCCC--------CCHHHHHHHHHHHHHHhCCCcEEEEEEecCCccccccccccccccccCCCHHHHHHH
Confidence 899999999998643 67999999999999999999999999999963 2368899999
Q ss_pred HHHHhHcCccccccceeeccchhHHHHHHHhcC--CCeeeec
Q 030178 142 LSLLPSFVKLKCSILYCGVVALVAKQMLLLFTN--IDFFIYQ 181 (182)
Q Consensus 142 l~~l~~~G~ir~~~~~iGvs~~~~~~~~~l~~~--~~~~~~q 181 (182)
|++|+++|+||+ ||||||++++++++++. ++++.+|
T Consensus 175 Le~l~~~GkIr~----iGvSn~~~~~l~~~~~~~~i~p~v~Q 212 (344)
T 2bgs_A 175 MENLVKDGLVKD----IGVCNYTVTKLNRLLRSAKIPPAVCQ 212 (344)
T ss_dssp HHHHHHTTSEEE----EEEESCCHHHHHHHHHHCSSCCSEEE
T ss_pred HHHHHHcCCccE----EEEecCCHHHHHHHHHhcCCCceeee
Confidence 999999999997 99999999999999873 3345555
No 41
>3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=77.30 E-value=0.64 Score=41.80 Aligned_cols=47 Identities=11% Similarity=-0.010 Sum_probs=35.7
Q ss_pred HHHHHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCccccccceeecc
Q 030178 109 CEASLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSILYCGVV 161 (182)
Q Consensus 109 ~~~sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~~iGvs 161 (182)
++.+|..|+++|+|+ .+|..+.. ..++++++++++..+|+|+. +|++
T Consensus 231 ~e~sL~~L~~d~vdI-~I~Ghn~~-~~~~iLeaa~~a~~~g~I~~----iG~c 277 (807)
T 3cf4_A 231 VEIGMGTIDKSKPFL-CVIGHNVA-GVTYMMDYMEDNNLTDKMEI----AGLC 277 (807)
T ss_dssp EEESGGGSCTTSCEE-EEESSCCH-HHHHHHHHHHHTTCTTTSEE----EEES
T ss_pred eeccccccCCCCceE-EEECCcCc-cHHHHHHHHHHCCCCCCCcE----Eeec
Confidence 455678899999999 57654432 24678999999999999996 9554
No 42
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=72.45 E-value=9.5 Score=29.96 Aligned_cols=124 Identities=11% Similarity=0.023 Sum_probs=68.2
Q ss_pred CChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhccCCCCCEEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHH
Q 030178 34 KPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKGGFRERAELATKFGIGIVDGKYGYHGDPAYVRAACEASL 113 (182)
Q Consensus 34 ~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL 113 (182)
.+.++..+.++.+.+.|++.|-....-.+-..-+.+-+.++......+.|.+-.+. .+.+.+++ |
T Consensus 84 ls~eei~~~i~~~~~~g~~~i~~~gGe~p~~~~~~~~~li~~i~~~~~~i~~s~g~----------l~~e~l~~-----L 148 (348)
T 3iix_A 84 MTPEEIVERARLAVQFGAKTIVLQSGEDPYXMPDVISDIVKEIKKMGVAVTLSLGE----------WPREYYEK-----W 148 (348)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEESCCGGGTTHHHHHHHHHHHTTSCEEEEECCC----------CCHHHHHH-----H
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEeCCCCCccHHHHHHHHHHHHhcCceEEEecCC----------CCHHHHHH-----H
Confidence 46788999999999999987765422111111133444444422225555533221 33444433 3
Q ss_pred HHhCCCccceEEeecCC--------CCCCHHHHHHHHHHHhHcCccccccceeeccchhHHHHHHHhc
Q 030178 114 KRLDVDCIDLYYQHRID--------TQTPIEVTVISLSLLPSFVKLKCSILYCGVVALVAKQMLLLFT 173 (182)
Q Consensus 114 ~~Lg~~~lDl~~lh~~d--------~~~~~~~~~~al~~l~~~G~ir~~~~~iGvs~~~~~~~~~l~~ 173 (182)
...|++.+- +-++..+ +...+++..++++.+++.|.--....-+|+.+.+.+++.+++.
T Consensus 149 ~~ag~~~v~-i~let~~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~G~p~et~e~~~~~~~ 215 (348)
T 3iix_A 149 KEAGADRYL-LRHETANPVLHRKLRPDTSFENRLNCLLTLKELGYETGAGSMVGLPGQTIDDLVDDLL 215 (348)
T ss_dssp HHHTCCEEE-CCCBCSCHHHHHHHSTTSCHHHHHHHHHHHHHTTCEEEECBEESCTTCCHHHHHHHHH
T ss_pred HHhCCCEEe-eeeeeCCHHHHHHhCCCcCHHHHHHHHHHHHHhCCeeccceEEeCCCCCHHHHHHHHH
Confidence 344554443 2233321 2235788999999999999643323446665667776665443
No 43
>1vpq_A Hypothetical protein TM1631; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.1.32.1
Probab=72.03 E-value=20 Score=27.70 Aligned_cols=152 Identities=9% Similarity=-0.015 Sum_probs=83.1
Q ss_pred cccCcceeccccCCCCCCCCCChH-HHHHHHHHHHHc--CCCeeec-cCCCCCCcHHHHHHHhhccCCCCCEEEEeccCC
Q 030178 14 LEVSAQGLGCMGMSALYGPPKPEP-DMIALIRHAINS--GITFLDT-SDIYGPHTNEILLGKAFKGGFRERAELATKFGI 89 (182)
Q Consensus 14 ~~vs~l~lGt~~~~~~~~~~~~~~-~~~~~l~~a~~~--G~~~~Dt-a~~Yg~g~~e~~lG~~l~~~~r~~~~i~tK~~~ 89 (182)
-.+=.||.+.|+...+-|.--+.. ...+-|... .. -.+.+.. +..|... .++.+.++.++. .+++..+.|...
T Consensus 11 ~~~i~iG~sgW~~~~W~G~fYP~~~~~~~~L~~Y-a~~~~F~tVEiNsTFY~~p-~~~t~~~W~~~t-P~~F~F~vKa~r 87 (273)
T 1vpq_A 11 HHMVYVGTSGFSFEDWKGVVYPEHLKPSQFLKYY-WAVLGFRIVELNFTYYTQP-SWRSFVQMLRKT-PPDFYFTVKTPG 87 (273)
T ss_dssp -CEEEEEEBCSCCSTTBTTTBCTTCCGGGHHHHH-HHTSCCCEEEECCCSSSSS-CHHHHHHHHTTS-CTTCEEEEECCH
T ss_pred cceEEEECCCCCCCCcCcccCCCCCCchHHHHHH-hCCCCCCeEEECccccCCC-CHHHHHHHHHhC-CCCeEEEEEeCh
Confidence 445568888887755322111111 011334443 34 5777765 4467654 456688888774 467888989764
Q ss_pred CcCCCCCCCCCCHHHHHHHHHHHHHHh--CCCccceEEeecCCCCCCHHHHHHHHHHHhHc-Cccccccceeecc--chh
Q 030178 90 GIVDGKYGYHGDPAYVRAACEASLKRL--DVDCIDLYYQHRIDTQTPIEVTVISLSLLPSF-VKLKCSILYCGVV--ALV 164 (182)
Q Consensus 90 ~~~~~~~~~~~~~~~i~~~~~~sL~~L--g~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~-G~ir~~~~~iGvs--~~~ 164 (182)
...-.........+..-+.+-++++-| + +.+..+++..|.......+.++.|+.+.+. |.--+ +-+= +|-
T Consensus 88 ~iTh~~~~~~~~~~~~~~~F~~~~~pL~~~-~kLG~vL~Q~Ppsf~~~~~~~~~L~~l~~~l~~~~A----vE~Rh~sW~ 162 (273)
T 1vpq_A 88 SVTHVLWKEGKDPKEDMENFTRQIEPLIEE-QRLKMTLAQFPFSFKFSRKNVEYLEKLRESYPYELA----VEFRHYSWD 162 (273)
T ss_dssp HHHHTHHHHTCCSHHHHHHHHHHHHHHHHT-TCEEEEEEECCTTCCCCHHHHHHHHHHHHHCCSCEE----EECCBGGGC
T ss_pred hhcccccccccchHHHHHHHHHHHHhhccC-CCEEEEEEEcCCCCCCCHHHHHHHHHHHHHcCCCEE----EEccCchhc
Confidence 210000000000122233444567777 7 799999999997665555666667777655 64333 5553 343
Q ss_pred HHHHHHHhc
Q 030178 165 AKQMLLLFT 173 (182)
Q Consensus 165 ~~~~~~l~~ 173 (182)
.+++.++++
T Consensus 163 ~~~~~~lL~ 171 (273)
T 1vpq_A 163 REETYEFLR 171 (273)
T ss_dssp SHHHHHHHH
T ss_pred cHHHHHHHH
Confidence 346665555
No 44
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=69.47 E-value=13 Score=30.78 Aligned_cols=60 Identities=8% Similarity=0.001 Sum_probs=39.8
Q ss_pred CCHHHHHHHHHHHHHHhCCCccceEEee-cCCCC----------C-CHHH----HHHHHHHHhHcCccccccceeeccch
Q 030178 100 GDPAYVRAACEASLKRLDVDCIDLYYQH-RIDTQ----------T-PIEV----TVISLSLLPSFVKLKCSILYCGVVAL 163 (182)
Q Consensus 100 ~~~~~i~~~~~~sL~~Lg~~~lDl~~lh-~~d~~----------~-~~~~----~~~al~~l~~~G~ir~~~~~iGvs~~ 163 (182)
.+.+.+.+.++... .|+.+++.++.+. .|... . +.++ .-.+.+.|.+.|... +++|||
T Consensus 217 et~e~~~~tl~~~~-~l~~~~i~~y~l~~~p~t~~~~~~~~~~~lp~~~~~~~~~~~~~~~L~~~Gy~~-----yeis~f 290 (457)
T 1olt_A 217 QTPESFAFTLKRVA-ELNPDRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSGYQF-----IGMDHF 290 (457)
T ss_dssp CCHHHHHHHHHHHH-HHCCSEEEEEECCCCTTTSGGGGGSCGGGSCCHHHHHHHHHHHHHHHHHTTCEE-----EETTEE
T ss_pred CCHHHHHHHHHHHH-hcCcCEEEeecCcCCcCchhHhhccccCCCcCHHHHHHHHHHHHHHHHHCCCeE-----EEechh
Confidence 56888888887654 6899999988776 23210 1 1122 234567778889876 999998
Q ss_pred hH
Q 030178 164 VA 165 (182)
Q Consensus 164 ~~ 165 (182)
..
T Consensus 291 a~ 292 (457)
T 1olt_A 291 AR 292 (457)
T ss_dssp EC
T ss_pred cC
Confidence 63
No 45
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=69.06 E-value=36 Score=25.93 Aligned_cols=98 Identities=11% Similarity=0.020 Sum_probs=49.0
Q ss_pred ccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCC-CCCcHHHHHHHhhcc---CCCC-CEEEEeccCC
Q 030178 15 EVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIY-GPHTNEILLGKAFKG---GFRE-RAELATKFGI 89 (182)
Q Consensus 15 ~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Y-g~g~~e~~lG~~l~~---~~r~-~~~i~tK~~~ 89 (182)
-.|+||.-... .+.++..+-++.+.+.|...+.-=-.| ..-.+...+.+.++. ...+ .+.++.+-..
T Consensus 18 g~PkIcvpl~~--------~t~~e~l~~a~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~~~~lPiI~T~Rt~~ 89 (258)
T 4h3d_A 18 GRPKICVPIIG--------KNKKDIIKEAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYIHDIPLLFTFRSVV 89 (258)
T ss_dssp SSCEEEEEECC--------SSHHHHHHHHHHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCTTSCEEEECCCGG
T ss_pred CCCEEEEEeCC--------CCHHHHHHHHHHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHhcCCCCEEEEEechh
Confidence 46777776643 256777777788888898877533323 211233334444433 1222 3343333222
Q ss_pred CcCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceE
Q 030178 90 GIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLY 124 (182)
Q Consensus 90 ~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~ 124 (182)
.. + ....+.+.-.+-++...+.-.++|+|+=
T Consensus 90 EG--G--~~~~~~~~~~~ll~~~~~~~~~d~iDvE 120 (258)
T 4h3d_A 90 EG--G--EKLISRDYYTTLNKEISNTGLVDLIDVE 120 (258)
T ss_dssp GT--C--SCCCCHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred hC--C--CCCCCHHHHHHHHHHHHhcCCchhhHHh
Confidence 11 1 1224445444444444444447888854
No 46
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=67.66 E-value=18 Score=28.12 Aligned_cols=61 Identities=16% Similarity=0.194 Sum_probs=41.2
Q ss_pred ccCcceeccccCCCCCCCCC-----ChHHHHHHHHHHHHc-CCCeeeccCCCCCCcHHHHHHHhhcc
Q 030178 15 EVSAQGLGCMGMSALYGPPK-----PEPDMIALIRHAINS-GITFLDTSDIYGPHTNEILLGKAFKG 75 (182)
Q Consensus 15 ~vs~l~lGt~~~~~~~~~~~-----~~~~~~~~l~~a~~~-G~~~~Dta~~Yg~g~~e~~lG~~l~~ 75 (182)
.-|+.++|+|.++..+..-. ++....+.++.+-+. |++.++....+..+..-+.+.+++++
T Consensus 6 ~~~~~~~~~w~~~~~~~~f~~~g~~~~~~~~e~l~~aa~~~G~~~VEl~~~~~~~~~~~~l~~~l~~ 72 (333)
T 3ktc_A 6 NYPEFGAGLWHFANYIDRYAVDGYGPALSTIDQINAAKEVGELSYVDLPYPFTPGVTLSEVKDALKD 72 (333)
T ss_dssp CCCCEEEEGGGGSCCCCSSSTTCSSCCCCHHHHHHHHHHHSSEEEEEEEESCSTTCCHHHHHHHHHH
T ss_pred CCCcceeeeeeeecccccccCCCCCCCCCHHHHHHHHHHhCCCCEEEecCCCcchhHHHHHHHHHHH
Confidence 45788999999987544311 234567899999999 99999986444322233446677755
No 47
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=66.55 E-value=3.7 Score=31.32 Aligned_cols=29 Identities=17% Similarity=0.511 Sum_probs=25.8
Q ss_pred ChHHHHHHHHHHHHcCCCeeeccCCCCCC
Q 030178 35 PEPDMIALIRHAINSGITFLDTSDIYGPH 63 (182)
Q Consensus 35 ~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g 63 (182)
++++...+.+.|.++|..|+.|+..|++|
T Consensus 155 t~eei~~a~~ia~~aGADfVKTSTGf~~g 183 (239)
T 3ngj_A 155 TNEEKVEVCKRCVAAGAEYVKTSTGFGTH 183 (239)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECCCSSSSC
T ss_pred CHHHHHHHHHHHHHHCcCEEECCCCCCCC
Confidence 67889999999999999999999988744
No 48
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=66.54 E-value=43 Score=25.88 Aligned_cols=52 Identities=8% Similarity=-0.226 Sum_probs=38.1
Q ss_pred CCHHHHHHHHHHHHHHhCCCccceEEeecCCC-CCCHHHHHHHHHHHhHcCcc
Q 030178 100 GDPAYVRAACEASLKRLDVDCIDLYYQHRIDT-QTPIEVTVISLSLLPSFVKL 151 (182)
Q Consensus 100 ~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~-~~~~~~~~~al~~l~~~G~i 151 (182)
.+.+...+..+-..+.++++.+.|=.+..+.. ..++.+++++.++|+++|..
T Consensus 74 ~taeeAv~~a~lare~~gt~~iKlEvi~d~~~l~pD~~~tv~aa~~L~k~Gf~ 126 (268)
T 2htm_A 74 RTAEEAVRLARLGRLLTGERWVKLEVIPDPTYLLPDPLETLKAAERLIEEDFL 126 (268)
T ss_dssp CSHHHHHHHHHHHHHHHCCSEEBCCCCSCTTTTCCCHHHHHHHHHHHHHTTCE
T ss_pred CCHHHHHHHHHhhhHhcCcceeeeeeccCccccCcCHHHHHHHHHHHHHCCCE
Confidence 56777777777777889999877544433322 34578999999999999955
No 49
>4h62_V Mediator of RNA polymerase II transcription subun; mediator complex, nucleus; HET: MES; 3.00A {Saccharomyces cerevisiae}
Probab=66.12 E-value=1.2 Score=21.81 Aligned_cols=18 Identities=33% Similarity=0.373 Sum_probs=10.2
Q ss_pred eeccchhHHHHHHHhcCC
Q 030178 158 CGVVALVAKQMLLLFTNI 175 (182)
Q Consensus 158 iGvs~~~~~~~~~l~~~~ 175 (182)
-||..|+.+|+++++++|
T Consensus 4 sgvtrfdekqieelldnc 21 (31)
T 4h62_V 4 SGVTRFDEKQIEELLDNC 21 (31)
T ss_dssp ------CHHHHHHHHHHH
T ss_pred CccccccHHHHHHHHHHH
Confidence 488899999999998753
No 50
>1gk8_I Ribulose bisphosphate carboxylase small chain 1; lyase, rubisco, photosynthesis; HET: KCX CAP; 1.4A {Chlamydomonas reinhardtii} SCOP: d.73.1.1 PDB: 2v63_I* 2v67_I* 2v68_I* 2v69_I* 2v6a_I* 2vdh_I* 2vdi_I* 1uw9_C* 1uwa_C* 1ir2_I* 1uzd_C* 1uzh_C*
Probab=65.80 E-value=24 Score=24.49 Aligned_cols=96 Identities=17% Similarity=0.141 Sum_probs=64.9
Q ss_pred eccccCCCCCCCCCChHHHHHHHHHHHHcCCC----eeeccCCCCCCcHHHHHHHhhccCCCCCEEEEeccCCCcCCCCC
Q 030178 21 LGCMGMSALYGPPKPEPDMIALIRHAINSGIT----FLDTSDIYGPHTNEILLGKAFKGGFRERAELATKFGIGIVDGKY 96 (182)
Q Consensus 21 lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~----~~Dta~~Yg~g~~e~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~ 96 (182)
|||.++ =.+.++++..+-++.++++|.+ |-|....|-.+.+-.-+|..--.+++...+-+-|+....
T Consensus 12 ~etfSy----LP~lt~eqI~kQI~YlL~qGw~p~lEf~d~~~~~r~~~~~~~~~~~~~~yyd~~YW~mWkLPmFg----- 82 (140)
T 1gk8_I 12 FETFSY----LPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFG----- 82 (140)
T ss_dssp CSTTTT----SSCCCHHHHHHHHHHHHHTTCEEEEEEECGGGTSCBCGGGGGCSSCCTTCCBTSSCEEESCCCTT-----
T ss_pred eccccc----CCCCCHHHHHHHHHHHHHCCCEeeEEeccCCcceecccccccccccCCCcCcCCeeeeCCcCCcC-----
Confidence 566543 3466889999999999999986 345555564333322233222225678888888876543
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCccceEEee
Q 030178 97 GYHGDPAYVRAACEASLKRLDVDCIDLYYQH 127 (182)
Q Consensus 97 ~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh 127 (182)
..+.+.|...+++.++..--.||-|+=+.
T Consensus 83 --~td~~qVl~El~~C~k~~P~~YVRligfD 111 (140)
T 1gk8_I 83 --CRDPMQVLREIVACTKAFPDAYVRLVAFD 111 (140)
T ss_dssp --CCCHHHHHHHHHHHHHHCTTSEEEEEEEE
T ss_pred --CCCHHHHHHHHHHHHHHCCCCeEEEEEEe
Confidence 46799999999999998876777665443
No 51
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=64.68 E-value=45 Score=25.49 Aligned_cols=52 Identities=21% Similarity=0.204 Sum_probs=33.8
Q ss_pred cceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccC-----CCCCCcHHHHHHHhhcc
Q 030178 18 AQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSD-----IYGPHTNEILLGKAFKG 75 (182)
Q Consensus 18 ~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~-----~Yg~g~~e~~lG~~l~~ 75 (182)
++|+-++.+..... +....+.++.+-++|++.++... .|+ ..-+.+.+.+++
T Consensus 14 ~~g~~~~s~~~~~~----~~~~~~~l~~~a~~G~~~VEl~~~~~~~~~~--~~~~~~~~~l~~ 70 (303)
T 3l23_A 14 EIGLQIYSLSQELY----KGDVAANLRKVKDMGYSKLELAGYGKGAIGG--VPMMDFKKMAED 70 (303)
T ss_dssp CCEEEGGGGGGGGG----SSCHHHHHHHHHHTTCCEEEECCEETTEETT--EEHHHHHHHHHH
T ss_pred ceEEEEEEchhhhc----cCCHHHHHHHHHHcCCCEEEeccccCcccCC--CCHHHHHHHHHH
Confidence 57888887632111 11377899999999999999875 232 233446666655
No 52
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=63.99 E-value=6.6 Score=22.97 Aligned_cols=20 Identities=15% Similarity=-0.041 Sum_probs=17.9
Q ss_pred CCHHHHHHHHHHHhHcCccc
Q 030178 133 TPIEVTVISLSLLPSFVKLK 152 (182)
Q Consensus 133 ~~~~~~~~al~~l~~~G~ir 152 (182)
.+-++++++|++|.++|+|+
T Consensus 37 V~kdeV~~~LrrLe~KGLI~ 56 (59)
T 2xvc_A 37 VEKQEVVKLLEALKNKGLIA 56 (59)
T ss_dssp CCHHHHHHHHHHHHHTTSEE
T ss_pred CCHHHHHHHHHHHHHCCCee
Confidence 44678999999999999998
No 53
>2pfu_A Biopolymer transport EXBD protein; TONB system, proton motive force, periplasmic domain; NMR {Escherichia coli}
Probab=63.31 E-value=17 Score=22.87 Aligned_cols=49 Identities=22% Similarity=0.136 Sum_probs=33.4
Q ss_pred HHHHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCccccccceeeccch
Q 030178 110 EASLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSILYCGVVAL 163 (182)
Q Consensus 110 ~~sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~~iGvs~~ 163 (182)
...|+.+....-+.-.+=..|...++..+++.|..|++.|.-+ +|+..-
T Consensus 45 ~~~l~~~~~~~~~~~V~I~aD~~~~y~~vv~vmd~l~~aG~~~-----v~l~t~ 93 (99)
T 2pfu_A 45 ITALNALTEGKKDTTIFFRADKTVDYETLMKVMDTLHQAGYLK-----IGLVGE 93 (99)
T ss_dssp HHHHHHHSSSCCSSCEEEEECTTCCHHHHHHHHHHHHHTCCCC-----EECTTC
T ss_pred HHHHHHHHhcCCCceEEEEcCCCCCHHHHHHHHHHHHHcCCCe-----EEEEec
Confidence 3334444323334333345677888999999999999999988 888653
No 54
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=62.04 E-value=45 Score=25.92 Aligned_cols=86 Identities=17% Similarity=0.024 Sum_probs=49.3
Q ss_pred cceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCC-c---HHHHHHHhhccC----C--CCCEEEEecc
Q 030178 18 AQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPH-T---NEILLGKAFKGG----F--RERAELATKF 87 (182)
Q Consensus 18 ~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g-~---~e~~lG~~l~~~----~--r~~~~i~tK~ 87 (182)
++.+-+..+ .+++....+.+.|.++|..|+=|+..|+++ . .=+++-++++.. + ..++-|-.-.
T Consensus 160 KVIlEt~~L-------~d~e~i~~A~~ia~eaGADfVKTSTGf~~~gAT~edv~lm~~~v~~~~~~~~~tg~~vgVKaaG 232 (281)
T 2a4a_A 160 KVIIEVGEL-------KTEDLIIKTTLAVLNGNADFIKTSTGKVQINATPSSVEYIIKAIKEYIKNNPEKNNKIGLKVSG 232 (281)
T ss_dssp EEECCHHHH-------CSHHHHHHHHHHHHTTTCSEEECCCSCSSCCCCHHHHHHHHHHHHHHHHHCGGGTTCCEEEEES
T ss_pred EEEEecccC-------CcHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCHHHHHHHHHHHHHhhcccccCCCCceEEEeC
Confidence 556666654 133336799999999999999999988754 1 223345555321 0 1112111112
Q ss_pred CCCcCCCCCCCCCCHHHHHHHHHHHHHHhCCCc
Q 030178 88 GIGIVDGKYGYHGDPAYVRAACEASLKRLDVDC 120 (182)
Q Consensus 88 ~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~ 120 (182)
+. .+.++..+-++..-+.||-++
T Consensus 233 GI----------rt~e~al~~i~aga~~lG~~w 255 (281)
T 2a4a_A 233 GI----------SDLNTASHYILLARRFLSSLA 255 (281)
T ss_dssp SC----------CSHHHHHHHHHHHHHHTC---
T ss_pred CC----------CCHHHHHHHHHHhhhhccccc
Confidence 22 356777777777777777653
No 55
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=59.55 E-value=40 Score=25.96 Aligned_cols=74 Identities=9% Similarity=-0.178 Sum_probs=52.9
Q ss_pred CCHHHHHHHHHHHHH-HhCCCccceEEeecCCC-CCCHHHHHHHHHHHhHcCccccccceeeccchhHHHHHHHhc-CCC
Q 030178 100 GDPAYVRAACEASLK-RLDVDCIDLYYQHRIDT-QTPIEVTVISLSLLPSFVKLKCSILYCGVVALVAKQMLLLFT-NID 176 (182)
Q Consensus 100 ~~~~~i~~~~~~sL~-~Lg~~~lDl~~lh~~d~-~~~~~~~~~al~~l~~~G~ir~~~~~iGvs~~~~~~~~~l~~-~~~ 176 (182)
.+.+.-.+..+-..+ .++++.+-|..+..+.. ..++.+++++.++|+++|..- +=+++-++...+++.+ .++
T Consensus 84 ~ta~eAv~~a~lare~~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~V-----lpy~~dd~~~akrl~~~G~~ 158 (265)
T 1wv2_A 84 YDAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDV-----MVYTSDDPIIARQLAEIGCI 158 (265)
T ss_dssp CSHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEE-----EEEECSCHHHHHHHHHSCCS
T ss_pred CCHHHHHHHHHHHHHHcCCCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEE-----EEEeCCCHHHHHHHHHhCCC
Confidence 456666666677777 78888888777755433 245789999999999999875 6667777777766654 344
Q ss_pred ee
Q 030178 177 FF 178 (182)
Q Consensus 177 ~~ 178 (182)
++
T Consensus 159 aV 160 (265)
T 1wv2_A 159 AV 160 (265)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 56
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=59.00 E-value=58 Score=24.91 Aligned_cols=86 Identities=8% Similarity=0.015 Sum_probs=54.3
Q ss_pred cceeccccCCCCCCCCCChHH-HHHHHHHHHHcCCCeeeccCCCCCC-cHHH---HHHHhhccCC-CCCEEEEeccCCCc
Q 030178 18 AQGLGCMGMSALYGPPKPEPD-MIALIRHAINSGITFLDTSDIYGPH-TNEI---LLGKAFKGGF-RERAELATKFGIGI 91 (182)
Q Consensus 18 ~l~lGt~~~~~~~~~~~~~~~-~~~~l~~a~~~G~~~~Dta~~Yg~g-~~e~---~lG~~l~~~~-r~~~~i~tK~~~~~ 91 (182)
++.+-+..+ ++++ ...+.+.|.++|..|+=|+..|+++ ..-+ ++-+.++... ..++-|-.-.+.
T Consensus 138 KvIlEt~~L--------~d~e~i~~a~~ia~eaGADfVKTSTGf~~~gAt~e~v~lm~~~I~~~~~g~~v~VKaaGGI-- 207 (260)
T 1p1x_A 138 KVIIETGEL--------KDEALIRKASEISIKAGADFIKTSTGKVAVNATPESARIMMEVIRDMGVEKTVGFKPAGGV-- 207 (260)
T ss_dssp EEECCHHHH--------CSHHHHHHHHHHHHHTTCSEEECCCSCSSCCCCHHHHHHHHHHHHHHTCTTTCEEECBSSC--
T ss_pred EEEEecccC--------CcHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCHHHHHHHHHHHHHhcCCCCceEEEeCCC--
Confidence 445555544 3344 6799999999999999999999844 3323 5666665411 122211111222
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCCcc
Q 030178 92 VDGKYGYHGDPAYVRAACEASLKRLDVDCI 121 (182)
Q Consensus 92 ~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~l 121 (182)
.+.++..+-++..-+.||.+++
T Consensus 208 --------rt~~~al~~i~aga~~lG~~w~ 229 (260)
T 1p1x_A 208 --------RTAEDAQKYLAIADELFGADWA 229 (260)
T ss_dssp --------CSHHHHHHHHHHHHHHHCTTSC
T ss_pred --------CCHHHHHHHHHhhhhhcccccc
Confidence 3477888888888888887644
No 57
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=54.27 E-value=66 Score=24.59 Aligned_cols=36 Identities=19% Similarity=0.166 Sum_probs=26.5
Q ss_pred cceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccC
Q 030178 18 AQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSD 58 (182)
Q Consensus 18 ~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~ 58 (182)
++|+-++.+.... .....+.++.+-++|++.++...
T Consensus 22 ~~g~~~~s~~~~~-----~~~l~~~l~~aa~~G~~~VEl~~ 57 (305)
T 3obe_A 22 KMGLQTYSLGQEL-----LQDMPNGLNRLAKAGYTDLEIFG 57 (305)
T ss_dssp CCEEEGGGGTHHH-----HTTHHHHHHHHHHHTCCEEEECC
T ss_pred ceEEEEEEchhhh-----hcCHHHHHHHHHHcCCCEEEecc
Confidence 6788888762210 12477899999999999999775
No 58
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=53.87 E-value=57 Score=24.39 Aligned_cols=48 Identities=6% Similarity=-0.029 Sum_probs=32.1
Q ss_pred cceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCC-CCCCcHHHHHHHhhcc
Q 030178 18 AQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDI-YGPHTNEILLGKAFKG 75 (182)
Q Consensus 18 ~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~-Yg~g~~e~~lG~~l~~ 75 (182)
+||+-++.+. .....+.++.+-+.|++.++.... |. ..-+.+.+.+++
T Consensus 27 klg~~~~~~~--------~~~~~~~l~~~~~~G~~~vEl~~~~~~--~~~~~~~~~l~~ 75 (287)
T 3kws_A 27 KLSFQEGIAP--------GESLNEKLDFMEKLGVVGFEPGGGGLA--GRVNEIKQALNG 75 (287)
T ss_dssp EEEEETTSSC--------CSSHHHHHHHHHHTTCCEEECBSTTCG--GGHHHHHHHHTT
T ss_pred eEEEEecccC--------CCCHHHHHHHHHHcCCCEEEecCCchH--HHHHHHHHHHHH
Confidence 6777777652 124678899999999999997765 32 333446666644
No 59
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=53.21 E-value=58 Score=24.33 Aligned_cols=36 Identities=14% Similarity=0.182 Sum_probs=25.4
Q ss_pred cceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccC
Q 030178 18 AQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSD 58 (182)
Q Consensus 18 ~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~ 58 (182)
+||+-++.++..+.. ...+.++.+-+.|++.++...
T Consensus 3 kigi~~~~~~~~~~~-----~~~~~l~~~~~~G~~~vEl~~ 38 (294)
T 3vni_A 3 KHGIYYAYWEQEWEA-----DYKYYIEKVAKLGFDILEIAA 38 (294)
T ss_dssp CEEEEGGGGCSSSCC-----CHHHHHHHHHHHTCSEEEEES
T ss_pred eEEEehhhhcCCcCc-----CHHHHHHHHHHcCCCEEEecC
Confidence 467777665432221 377889999999999999774
No 60
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=53.12 E-value=59 Score=24.18 Aligned_cols=35 Identities=9% Similarity=0.113 Sum_probs=24.0
Q ss_pred cceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccC
Q 030178 18 AQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSD 58 (182)
Q Consensus 18 ~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~ 58 (182)
+||+.++.+... .....+.++.+-+.|++.++...
T Consensus 2 klg~~~~~~~~~------~~~~~~~l~~~~~~G~~~vEl~~ 36 (286)
T 3dx5_A 2 KYSLCTISFRHQ------LISFTDIVQFAYENGFEGIELWG 36 (286)
T ss_dssp EEEEEGGGGTTS------CCCHHHHHHHHHHTTCCEEEEEH
T ss_pred eEEEEeeeccCC------CCCHHHHHHHHHHhCCCEEEEcc
Confidence 467777765210 02266889999999999999743
No 61
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=52.35 E-value=22 Score=27.45 Aligned_cols=47 Identities=11% Similarity=-0.065 Sum_probs=35.1
Q ss_pred HHHHHHHHHHhCCCccceEEeecCCCCC-----CHHHHHHHHHHHhH-cCccc
Q 030178 106 RAACEASLKRLDVDCIDLYYQHRIDTQT-----PIEVTVISLSLLPS-FVKLK 152 (182)
Q Consensus 106 ~~~~~~sL~~Lg~~~lDl~~lh~~d~~~-----~~~~~~~al~~l~~-~G~ir 152 (182)
++.+.+.|++||+..=|.+++|.--... ....+++||.++.. +|-+-
T Consensus 17 ~~~l~~~L~~LGi~~Gd~llVHsSl~~lG~v~gg~~~vi~AL~~~vg~~GTLv 69 (268)
T 3ijw_A 17 IKTITNDLRKLGLKKGMTVIVHSSLSSIGWISGGAVAVVEALMEVITEEGTII 69 (268)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEEECTGGGCCBTTHHHHHHHHHHHHHCTTSEEE
T ss_pred HHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhCCCCeEE
Confidence 4566677789999999999999853321 14578899988876 78774
No 62
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=52.05 E-value=15 Score=28.36 Aligned_cols=38 Identities=18% Similarity=0.137 Sum_probs=31.0
Q ss_pred cceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCC
Q 030178 18 AQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPH 63 (182)
Q Consensus 18 ~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g 63 (182)
++.+-+..+ ++++...+.+.|.++|..|+=|+..|+++
T Consensus 162 KVIlEt~~L--------t~eei~~A~~ia~eaGADfVKTSTGf~~~ 199 (260)
T 3r12_A 162 KVIIETCYL--------DTEEKIAACVISKLAGAHFVKTSTGFGTG 199 (260)
T ss_dssp EEECCGGGC--------CHHHHHHHHHHHHHTTCSEEECCCSSSSC
T ss_pred EEEEeCCCC--------CHHHHHHHHHHHHHhCcCEEEcCCCCCCC
Confidence 566666543 66889999999999999999999988744
No 63
>3sma_A FRBF; N-acetyl transferase, acetyl COA binding, transferase; HET: ACO; 2.00A {Streptomyces rubellomurinus}
Probab=51.36 E-value=37 Score=26.51 Aligned_cols=48 Identities=17% Similarity=0.042 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHhCCCccceEEeecCCCCCC-----HHHHHHHHHHHh-HcCccc
Q 030178 105 VRAACEASLKRLDVDCIDLYYQHRIDTQTP-----IEVTVISLSLLP-SFVKLK 152 (182)
Q Consensus 105 i~~~~~~sL~~Lg~~~lDl~~lh~~d~~~~-----~~~~~~al~~l~-~~G~ir 152 (182)
-++.+.+.|++||+..=|.+++|.--.... ...+++||.++. ++|-+-
T Consensus 23 T~~~L~~~L~~LGI~~Gd~llVHsSL~~lG~v~Gga~~vi~AL~~~vg~~GTLv 76 (286)
T 3sma_A 23 TRDRLASDLAALGVRPGGVLLVHASLSALGWVCGGAQAVVLALQDAVGKEGTLV 76 (286)
T ss_dssp CHHHHHHHHHHHTCCTTCEEEEEECSTTSCEETTHHHHHHHHHHHHHCTTCEEE
T ss_pred CHHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhcCCCEEE
Confidence 356677788899999999999998644322 457889998887 478773
No 64
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=51.08 E-value=13 Score=28.04 Aligned_cols=27 Identities=30% Similarity=0.409 Sum_probs=25.0
Q ss_pred ChHHHHHHHHHHHHcCCCeeeccCCCC
Q 030178 35 PEPDMIALIRHAINSGITFLDTSDIYG 61 (182)
Q Consensus 35 ~~~~~~~~l~~a~~~G~~~~Dta~~Yg 61 (182)
++++...+.+.|.++|..|+=|+..|+
T Consensus 144 t~eei~~a~~ia~~aGADfVKTSTGf~ 170 (231)
T 3ndo_A 144 GEPLLADVCRVARDAGADFVKTSTGFH 170 (231)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECCCSCC
T ss_pred CHHHHHHHHHHHHHHCcCEEEcCCCCC
Confidence 678899999999999999999999886
No 65
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=50.65 E-value=53 Score=23.41 Aligned_cols=87 Identities=16% Similarity=0.082 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhccCCC-CCEEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHHH
Q 030178 37 PDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKGGFR-ERAELATKFGIGIVDGKYGYHGDPAYVRAACEASLKR 115 (182)
Q Consensus 37 ~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~~~r-~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~ 115 (182)
+++.+++..|+..|...+ .||.|+++-+.-+++....| ..+ .++. ..
T Consensus 25 ~~AA~llaqai~~~g~Iy----vfG~Ghs~~~~~e~~~~~e~l~~~---~~~~-------------------------~~ 72 (170)
T 3jx9_A 25 FDVVRLLAQALVGQGKVY----LDAYGEFEGLYPMLSDGPDQMKRV---TKIK-------------------------DH 72 (170)
T ss_dssp HHHHHHHHHHHHTTCCEE----EEECGGGGGGTHHHHTSTTCCTTE---EECC-------------------------TT
T ss_pred HHHHHHHHHHHhCCCEEE----EECCCcHHHHHHHHHcccCCccch---hhhh-------------------------hc
Confidence 557778888887776655 46766776666666644211 111 1110 01
Q ss_pred hCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCccccccceeeccc
Q 030178 116 LDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSILYCGVVA 162 (182)
Q Consensus 116 Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~~iGvs~ 162 (182)
-.++.-|.++++++.... ....+...+++++|.-- |+|+|
T Consensus 73 ~~i~~~D~vii~S~Sg~n--~~~ie~A~~ake~G~~v-----IaITs 112 (170)
T 3jx9_A 73 KTLHAVDRVLIFTPDTER--SDLLASLARYDAWHTPY-----SIITL 112 (170)
T ss_dssp CCCCTTCEEEEEESCSCC--HHHHHHHHHHHHHTCCE-----EEEES
T ss_pred CCCCCCCEEEEEeCCCCC--HHHHHHHHHHHHCCCcE-----EEEeC
Confidence 156788999999986543 46788999999999875 99988
No 66
>2nyg_A YOKD protein; PFAM02522, NYSGXRC, aminoglycoside 3-N- acetyltransferase, PSI-2, structural genomics, protein structure initiative; HET: COA; 2.60A {Bacillus subtilis} SCOP: c.140.1.2
Probab=48.04 E-value=30 Score=26.75 Aligned_cols=46 Identities=11% Similarity=-0.028 Sum_probs=34.3
Q ss_pred HHHHHHHHHHhCCCccceEEeecCCCC-----CCHHHHHHHHHHHhH-cCcc
Q 030178 106 RAACEASLKRLDVDCIDLYYQHRIDTQ-----TPIEVTVISLSLLPS-FVKL 151 (182)
Q Consensus 106 ~~~~~~sL~~Lg~~~lDl~~lh~~d~~-----~~~~~~~~al~~l~~-~G~i 151 (182)
++.+.+.|+.||+..=|.+++|.--.. -....+++||.+++. +|-+
T Consensus 15 ~~~L~~~L~~LGI~~Gd~llVHsSl~~lG~v~gg~~~vi~AL~~~vg~~GTL 66 (273)
T 2nyg_A 15 KQSITEDLKALGLKKGMTVLVHSSLSSIGWVNGGAVAVIQALIDVVTEEGTI 66 (273)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEEECSGGGCCBTTHHHHHHHHHHHHHTTTSEE
T ss_pred HHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhCCCCeE
Confidence 455667778999999999999985322 124578899988775 7766
No 67
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=47.48 E-value=33 Score=25.87 Aligned_cols=36 Identities=14% Similarity=0.017 Sum_probs=29.4
Q ss_pred cceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCC
Q 030178 18 AQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYG 61 (182)
Q Consensus 18 ~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg 61 (182)
++.+-+..+ ++++...+.+.+.++|..|+=|+..|+
T Consensus 137 KvIlEt~~L--------~~e~i~~a~ria~eaGADfVKTsTG~~ 172 (234)
T 1n7k_A 137 KVILEAPLW--------DDKTLSLLVDSSRRAGADIVKTSTGVY 172 (234)
T ss_dssp EEECCGGGS--------CHHHHHHHHHHHHHTTCSEEESCCSSS
T ss_pred EEEEeccCC--------CHHHHHHHHHHHHHhCCCEEEeCCCCC
Confidence 555666543 568899999999999999999999887
No 68
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=47.35 E-value=64 Score=24.11 Aligned_cols=37 Identities=11% Similarity=0.073 Sum_probs=30.3
Q ss_pred CcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCC
Q 030178 17 SAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYG 61 (182)
Q Consensus 17 s~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg 61 (182)
-++.+-+..+ ++++...+.+.+.++|..|+=|+..|+
T Consensus 116 lKvIlEt~~L--------t~eei~~a~~ia~eaGADfVKTSTGf~ 152 (226)
T 1vcv_A 116 VKVITEEPYL--------RDEERYTLYDIIAEAGAHFIKSSTGFA 152 (226)
T ss_dssp EEEECCGGGC--------CHHHHHHHHHHHHHHTCSEEECCCSCC
T ss_pred ceEEEeccCC--------CHHHHHHHHHHHHHcCCCEEEeCCCCC
Confidence 3455666544 568899999999999999999999887
No 69
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=46.65 E-value=1e+02 Score=25.13 Aligned_cols=92 Identities=12% Similarity=0.016 Sum_probs=57.0
Q ss_pred ChHHHHHHHHHHHHcCCCeeeccCCCCC-------Cc-------HHHHHHHhhcc----CCCCCEEEEeccCCCcCCCCC
Q 030178 35 PEPDMIALIRHAINSGITFLDTSDIYGP-------HT-------NEILLGKAFKG----GFRERAELATKFGIGIVDGKY 96 (182)
Q Consensus 35 ~~~~~~~~l~~a~~~G~~~~Dta~~Yg~-------g~-------~e~~lG~~l~~----~~r~~~~i~tK~~~~~~~~~~ 96 (182)
.++...++-+..+++|-+.+.|.....+ |. .+++...+.+- ......+|+.-+++...-
T Consensus 52 ~Pe~V~~iH~~Yl~AGAdII~TNTf~A~~~~l~~~G~~~~~~~~~~eln~~Av~LAreAa~~~~~~VAGsIGP~g~~--- 128 (406)
T 1lt8_A 52 HPEAVRQLHREFLRAGSNVMQTFTFYASEDKLENRGNYVLEKISGQEVNEAAADIARQVADEGDALVAGGVSQTPSY--- 128 (406)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSCTTCSSCC-------------CHHHHHHHHHHHHHHHTTTTCEEEEEECCCHHH---
T ss_pred CHHHHHHHHHHHHHhCccceeccccccCHHHHHhcCCccchhHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCCcccc---
Confidence 4577789999999999999998864331 11 12333333322 122347888888876420
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCccceEEeecC
Q 030178 97 GYHGDPAYVRAACEASLKRLDVDCIDLYYQHRI 129 (182)
Q Consensus 97 ~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~ 129 (182)
....+.+.+++....-++.|--..+|++++.-.
T Consensus 129 l~~~s~eel~~~~~eqi~~L~~~GvDlll~ETi 161 (406)
T 1lt8_A 129 LSAKSETEVKKVFLQQLEVFMKKNVDFLIAEYF 161 (406)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred cCCCCHHHHHHHHHHHHHHHhhCCCCEEEEccc
Confidence 023566777777777766664356888888753
No 70
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=46.41 E-value=50 Score=25.90 Aligned_cols=52 Identities=19% Similarity=0.151 Sum_probs=36.1
Q ss_pred cCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCCc----HHHHHHHhhc
Q 030178 16 VSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHT----NEILLGKAFK 74 (182)
Q Consensus 16 vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~----~e~~lG~~l~ 74 (182)
+-++.+-|..+ .+++...++.+.|+++|..|+-|+..++++. .=+++-++++
T Consensus 152 ~lKVIlEt~~L-------t~~e~i~~A~~ia~~AGADFVKTSTGf~~~gAT~edV~lM~~~v~ 207 (297)
T 4eiv_A 152 TLKVVLSGGEL-------QGGDIISRAAVAALEGGADFLQTSSGLGATHATMFTVHLISIALR 207 (297)
T ss_dssp EEEEECCSSCC-------CCHHHHHHHHHHHHHHTCSEEECCCSSSSCCCCHHHHHHHHHHHH
T ss_pred ceEEEEecccC-------CcHHHHHHHHHHHHHhCCCEEEcCCCCCCCCCCHHHHHHHHHHHH
Confidence 44666666654 1334467899999999999999999997542 2245656664
No 71
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=46.11 E-value=85 Score=24.52 Aligned_cols=124 Identities=16% Similarity=0.091 Sum_probs=63.4
Q ss_pred HHHHHHHHcCCCeeeccCCCCCCcHHHHHH--HhhccCCCCCEEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHHHhCC
Q 030178 41 ALIRHAINSGITFLDTSDIYGPHTNEILLG--KAFKGGFRERAELATKFGIGIVDGKYGYHGDPAYVRAACEASLKRLDV 118 (182)
Q Consensus 41 ~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG--~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~ 118 (182)
+.++.....+..+|+.+..-|....+..+. ..++. +..+-....+... +.++..++..+... ..+|+
T Consensus 43 ~~~~~l~~l~p~fvsVT~gagg~~r~~t~~~a~~i~~--~~g~~~v~Hltc~--------~~~~~~l~~~L~~~-~~~GI 111 (304)
T 3fst_A 43 NSIDRLSSLKPKFVSVTYGANSGERDRTHSIIKGIKD--RTGLEAAPHLTCI--------DATPDELRTIARDY-WNNGI 111 (304)
T ss_dssp HHHHHHHTTCCSEEEECCCTTSSCHHHHHHHHHHHHH--HHCCCEEEEEEST--------TSCHHHHHHHHHHH-HHTTC
T ss_pred HHHHHHhcCCCCEEEEeeCCCCcchhHHHHHHHHHHH--HhCCCeeEEeecC--------CCCHHHHHHHHHHH-HHCCC
Confidence 446666667899999885443333344333 33322 1122222333222 25677788777766 57886
Q ss_pred CccceEEeec-CCCC--CCHHHHHHHHHHHhHcCccccccceeeccchh--------H-HHHHHHhc----CCCeeeecC
Q 030178 119 DCIDLYYQHR-IDTQ--TPIEVTVISLSLLPSFVKLKCSILYCGVVALV--------A-KQMLLLFT----NIDFFIYQL 182 (182)
Q Consensus 119 ~~lDl~~lh~-~d~~--~~~~~~~~al~~l~~~G~ir~~~~~iGvs~~~--------~-~~~~~l~~----~~~~~~~q~ 182 (182)
..+ +.+.- |... .++..+.+-++.+++.+-+. ||+..+. . .++..+.+ ..+++.+|+
T Consensus 112 ~nI--LaLrGDpp~~~~~~~~~A~dLv~~ir~~~~f~-----IgvA~yPE~Hp~a~~~~~d~~~Lk~KvdAGAdf~iTQ~ 184 (304)
T 3fst_A 112 RHI--VALRGDLPPGSGKPEMYASDLVTLLKEVADFD-----ISVAAYPEVHPEAKSAQADLLNLKRKVDAGANRAITQF 184 (304)
T ss_dssp CEE--EEECCCCC------CCCHHHHHHHHHHHCCCE-----EEEEECTTCCTTCSCHHHHHHHHHHHHHHTCCEEEECC
T ss_pred CEE--EEecCCCCCCCCCCCCCHHHHHHHHHHcCCCe-----EEEEeCCCcCCCCCCHHHHHHHHHHHHHcCCCEEEeCc
Confidence 532 33321 1111 12233455555555555554 8998652 1 24444443 679999985
No 72
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=45.96 E-value=1.1e+02 Score=24.44 Aligned_cols=66 Identities=9% Similarity=-0.153 Sum_probs=36.2
Q ss_pred HHHHHHHHHhCCCccceEEeecCCCCCCHH-HHHHHHHHHhHcCccccccceeeccchhHHHHHHHhcC--CCeee
Q 030178 107 AACEASLKRLDVDCIDLYYQHRIDTQTPIE-VTVISLSLLPSFVKLKCSILYCGVVALVAKQMLLLFTN--IDFFI 179 (182)
Q Consensus 107 ~~~~~sL~~Lg~~~lDl~~lh~~d~~~~~~-~~~~al~~l~~~G~ir~~~~~iGvs~~~~~~~~~l~~~--~~~~~ 179 (182)
..+-+.|+..|++||++ |......... ..++.+.++++.=.+-- |+...++++..+++++. +|++.
T Consensus 258 ~~la~~le~~Gvd~i~v---~~~~~~~~~~~~~~~~~~~ik~~~~iPv----i~~Ggi~~~~a~~~l~~g~aD~V~ 326 (377)
T 2r14_A 258 FYLAGELDRRGLAYLHF---NEPDWIGGDITYPEGFREQMRQRFKGGL----IYCGNYDAGRAQARLDDNTADAVA 326 (377)
T ss_dssp HHHHHHHHHTTCSEEEE---ECCC------CCCTTHHHHHHHHCCSEE----EEESSCCHHHHHHHHHTTSCSEEE
T ss_pred HHHHHHHHHcCCCEEEE---eCCcccCCCCcchHHHHHHHHHHCCCCE----EEECCCCHHHHHHHHHCCCceEEe
Confidence 34567778889777765 4421110000 02344444544433432 66667778888888873 67764
No 73
>2jwk_A Protein TOLR; periplasmic domain, membrane, inner membrane, protein transport, transmembrane, transport, membrane protein; NMR {Haemophilus influenzae} PDB: 2jwl_A
Probab=43.77 E-value=23 Score=20.82 Aligned_cols=47 Identities=15% Similarity=0.111 Sum_probs=31.9
Q ss_pred CCHHHHHHHHHHHHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCc
Q 030178 100 GDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVK 150 (182)
Q Consensus 100 ~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ 150 (182)
.+.+.+...+.+.+.. + .+.-.+=..|...++..+++.|..|++.|.
T Consensus 27 v~~~~L~~~l~~~~~~-~---~~~~V~I~aD~~~~y~~vv~vmd~l~~aG~ 73 (74)
T 2jwk_A 27 LTEEMVTQLSRQEFDK-D---NNTLFLVGGAKEVPYEEVIKALNLLHLAGI 73 (74)
T ss_dssp ECHHHHHHHHHHHHHH-C---TTCCEEEEECTTSCHHHHHHHHHHHHHTTC
T ss_pred cCHHHHHHHHHHHHhh-C---CCceEEEEcCCCCCHHHHHHHHHHHHHcCC
Confidence 4566677766665543 1 233233356778889999999999999884
No 74
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=43.55 E-value=64 Score=25.14 Aligned_cols=39 Identities=15% Similarity=0.086 Sum_probs=30.2
Q ss_pred CcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCC
Q 030178 17 SAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPH 63 (182)
Q Consensus 17 s~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g 63 (182)
-++.+=+..+ ++++...+.+.|.++|..|+=|+..|+.+
T Consensus 176 lKVIlEt~~L--------t~eei~~A~~ia~eaGADfVKTSTGf~~~ 214 (288)
T 3oa3_A 176 LKVILETSQL--------TADEIIAGCVLSSLAGADYVKTSTGFNGP 214 (288)
T ss_dssp EEEECCGGGC--------CHHHHHHHHHHHHHTTCSEEECCCSSSSC
T ss_pred ceEEEECCCC--------CHHHHHHHHHHHHHcCCCEEEcCCCCCCC
Confidence 4555555433 56778889999999999999999888743
No 75
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=43.21 E-value=55 Score=24.05 Aligned_cols=36 Identities=11% Similarity=0.166 Sum_probs=25.2
Q ss_pred cCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccC
Q 030178 16 VSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSD 58 (182)
Q Consensus 16 vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~ 58 (182)
..++|+.++.+.. +....+.++.+-++|++.++...
T Consensus 4 ~~~lg~~~~~~~~-------~~~~~~~l~~~~~~G~~~vEl~~ 39 (275)
T 3qc0_A 4 VEGLSINLATIRE-------QCGFAEAVDICLKHGITAIAPWR 39 (275)
T ss_dssp CTTEEEEGGGGTT-------TCCHHHHHHHHHHTTCCEEECBH
T ss_pred cccceeeeeeccC-------CCCHHHHHHHHHHcCCCEEEecc
Confidence 4567777776511 12256788999999999999654
No 76
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=42.79 E-value=62 Score=25.69 Aligned_cols=82 Identities=15% Similarity=0.062 Sum_probs=48.0
Q ss_pred CcHHHHHHHhhccCCCCCEEEEeccCCCcCC---C-CCCCCCC----HHHHHHHHHHHHHHhCCCccceEEeecCCCCCC
Q 030178 63 HTNEILLGKAFKGGFRERAELATKFGIGIVD---G-KYGYHGD----PAYVRAACEASLKRLDVDCIDLYYQHRIDTQTP 134 (182)
Q Consensus 63 g~~e~~lG~~l~~~~r~~~~i~tK~~~~~~~---~-~~~~~~~----~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~~~ 134 (182)
|..|+.+-++++...+.+.+|.-|.+....+ . ...+..+ ...-.+..+..|++.|+-.+| .+ ..
T Consensus 235 g~~e~~~~~~~r~~~~~KPVV~~kaGrs~~~~g~~aa~sHtGalag~~~~~a~~~~aa~~~aGv~~v~-----~~---~e 306 (334)
T 3mwd_B 235 GTEEYKICRGIKEGRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVPR-----SF---DE 306 (334)
T ss_dssp SSHHHHHHHHHHTTSCCSCEEEEEECTTCC----------------CGGGSHHHHHHHHHHTTCBCCS-----SG---GG
T ss_pred ChHHHHHHHHHHhhcCCCCEEEEEcCCCcccccccccccchhhhccCCCccHHHHHHHHHHcCCeEcC-----CH---HH
Confidence 4566667788877667888889998876531 1 1111111 111123677888999974333 22 22
Q ss_pred HHH-HHHHHHHHhHcCccc
Q 030178 135 IEV-TVISLSLLPSFVKLK 152 (182)
Q Consensus 135 ~~~-~~~al~~l~~~G~ir 152 (182)
+-+ .-+.|++|+.+|.|.
T Consensus 307 l~~~~~~~~~~l~~~~~~~ 325 (334)
T 3mwd_B 307 LGEIIQSVYEDLVANGVIV 325 (334)
T ss_dssp HHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHCCcEe
Confidence 333 446688999999885
No 77
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=42.63 E-value=26 Score=25.76 Aligned_cols=70 Identities=11% Similarity=0.031 Sum_probs=40.3
Q ss_pred CHHHHHHHHHHHHHHhCCCccceEEeecCCC-CCCHHHHHHHHHHHhHcCccccccceeecc-chhHHHHHHHhcCCCee
Q 030178 101 DPAYVRAACEASLKRLDVDCIDLYYQHRIDT-QTPIEVTVISLSLLPSFVKLKCSILYCGVV-ALVAKQMLLLFTNIDFF 178 (182)
Q Consensus 101 ~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~-~~~~~~~~~al~~l~~~G~ir~~~~~iGvs-~~~~~~~~~l~~~~~~~ 178 (182)
++++++.+ .++|.||+-+.+. -+.+ ..+. +....|......+ ++. +||- |-+.+.+.++.+.+.+.
T Consensus 10 ~~eda~~a-----~~~GaD~iGfif~-~~SpR~V~~-~~a~~i~~~~~~~-~~~----VgVfvn~~~~~i~~~~~~~~ld 77 (203)
T 1v5x_A 10 RLEDALLA-----EALGAFALGFVLA-PGSRRRIAP-EAARAIGEALGPF-VVR----VGVFRDQPPEEVLRLMEEARLQ 77 (203)
T ss_dssp CHHHHHHH-----HHHTCSEEEEECC-TTCTTBCCH-HHHHHHHHHSCSS-SEE----EEEESSCCHHHHHHHHHHTTCS
T ss_pred cHHHHHHH-----HHcCCCEEEEEec-CCCCCcCCH-HHHHHHHHhCCCC-CCE----EEEEeCCCHHHHHHHHHhhCCC
Confidence 35555544 3679999998843 2222 2333 3444444333322 443 8886 67789998888765555
Q ss_pred eecC
Q 030178 179 IYQL 182 (182)
Q Consensus 179 ~~q~ 182 (182)
.+|+
T Consensus 78 ~vQL 81 (203)
T 1v5x_A 78 VAQL 81 (203)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5553
No 78
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=42.03 E-value=97 Score=22.45 Aligned_cols=74 Identities=14% Similarity=0.029 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCccccccceeecc-chhHHHHHHHhc-CCCeee
Q 030178 102 PAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSILYCGVV-ALVAKQMLLLFT-NIDFFI 179 (182)
Q Consensus 102 ~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~~iGvs-~~~~~~~~~l~~-~~~~~~ 179 (182)
...+.+.+++.+++.|.+ +.+..++...+.+...+.++.+...+.+..++. .+.. ......++.+.+ ..+++.
T Consensus 15 ~~~~~~gi~~~~~~~g~~----~~~~~~~~~~~~~~~~~~i~~l~~~~~vdgii~-~~~~~~~~~~~~~~~~~~~ipvV~ 89 (276)
T 3ksm_A 15 WRQVYLGAQKAADEAGVT----LLHRSTKDDGDIAGQIQILSYHLSQAPPDALIL-APNSAEDLTPSVAQYRARNIPVLV 89 (276)
T ss_dssp HHHHHHHHHHHHHHHTCE----EEECCCSSTTCHHHHHHHHHHHHHHSCCSEEEE-CCSSTTTTHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHHHcCCE----EEEECCCCCCCHHHHHHHHHHHHHhCCCCEEEE-eCCCHHHHHHHHHHHHHCCCcEEE
Confidence 567888999999999853 334444444566777788888887775554211 2322 345566666654 567765
Q ss_pred e
Q 030178 180 Y 180 (182)
Q Consensus 180 ~ 180 (182)
+
T Consensus 90 ~ 90 (276)
T 3ksm_A 90 V 90 (276)
T ss_dssp E
T ss_pred E
Confidence 4
No 79
>3l9c_A 3-dehydroquinate dehydratase; AROD, amino-acid biosynthesis, aromatic amino acid biosynthe schiff base, lyase; 1.60A {Streptococcus mutans}
Probab=40.83 E-value=1.2e+02 Score=23.10 Aligned_cols=51 Identities=18% Similarity=0.087 Sum_probs=32.5
Q ss_pred CCHHHHHHHHHHHHHHhCCCccceE-------------------EeecCCCCCCHHHHHHHHHHHhHcC--ccc
Q 030178 100 GDPAYVRAACEASLKRLDVDCIDLY-------------------YQHRIDTQTPIEVTVISLSLLPSFV--KLK 152 (182)
Q Consensus 100 ~~~~~i~~~~~~sL~~Lg~~~lDl~-------------------~lh~~d~~~~~~~~~~al~~l~~~G--~ir 152 (182)
.+.+.-.+-++..++.++++|+|+= ..|+.+.. |. +..+.++++.+.| .+|
T Consensus 106 ~~~~~y~~ll~~~~~~~~~dyIDVEl~~~~~~~~~l~~~~kiI~S~Hdf~~t-p~-el~~~~~~~~~~GaDIvK 177 (259)
T 3l9c_A 106 LSNEDYLAIIRDIAALYQPDYIDFEYFSYRDVLEEMYDFSNLILSYHNFEET-PE-NLMEVFSELTALAPRVVK 177 (259)
T ss_dssp CCHHHHHHHHHHHHHHHCCSEEEEEHHHHGGGGGGGTTCSSEEEEEEESSCC-CT-THHHHHHHHHHTCCSEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEECcCCHHHHHHHHhcCeEEEEeccCCCC-HH-HHHHHHHHHHHcCCCEEE
Confidence 4555566667777777899999963 33433222 22 5667777777777 556
No 80
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=40.74 E-value=1e+02 Score=22.54 Aligned_cols=86 Identities=13% Similarity=0.052 Sum_probs=47.1
Q ss_pred CcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCC-CCcHH---HHHHHhhccCCCCCEEEEeccCCCcC
Q 030178 17 SAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYG-PHTNE---ILLGKAFKGGFRERAELATKFGIGIV 92 (182)
Q Consensus 17 s~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg-~g~~e---~~lG~~l~~~~r~~~~i~tK~~~~~~ 92 (182)
-++|+-++.+.. ....+.++.+-+.|++.++....+- .+..+ +.+.+.+++ ..+.+++-.....
T Consensus 18 ~klg~~~~~~~~--------~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~---~gl~i~~~~~~~~- 85 (257)
T 3lmz_A 18 FHLGMAGYTFVN--------FDLDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAA---HKVTGYAVGPIYM- 85 (257)
T ss_dssp SEEEECGGGGTT--------SCHHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHH---TTCEEEEEEEEEE-
T ss_pred eEEEEEEEeecC--------CCHHHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHH---cCCeEEEEecccc-
Confidence 456777776521 2367889999999999999775421 11122 345555544 3333332211111
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccc
Q 030178 93 DGKYGYHGDPAYVRAACEASLKRLDVDCID 122 (182)
Q Consensus 93 ~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lD 122 (182)
...+.+++.++ .-..||..++=
T Consensus 86 -------~~~~~~~~~i~-~A~~lGa~~v~ 107 (257)
T 3lmz_A 86 -------KSEEEIDRAFD-YAKRVGVKLIV 107 (257)
T ss_dssp -------CSHHHHHHHHH-HHHHHTCSEEE
T ss_pred -------CCHHHHHHHHH-HHHHhCCCEEE
Confidence 23556666555 34678876554
No 81
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=39.61 E-value=24 Score=25.96 Aligned_cols=69 Identities=9% Similarity=-0.003 Sum_probs=39.3
Q ss_pred CHHHHHHHHHHHHHHhCCCccceEEeecCCC-CCCHHHHHHHHHHHhHcCccccccceeecc-chhHHHHHHHhcCCCee
Q 030178 101 DPAYVRAACEASLKRLDVDCIDLYYQHRIDT-QTPIEVTVISLSLLPSFVKLKCSILYCGVV-ALVAKQMLLLFTNIDFF 178 (182)
Q Consensus 101 ~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~-~~~~~~~~~al~~l~~~G~ir~~~~~iGvs-~~~~~~~~~l~~~~~~~ 178 (182)
++++++.+. .+|.||+-+.+. -+.+ ..+. +....|.+.... .+.. +||- |-+.+.+.++.+.+.+.
T Consensus 11 ~~eda~~a~-----~~GaD~iGfif~-~~SpR~V~~-~~a~~i~~~~~~-~~~~----VgVfvn~~~~~i~~~~~~~~ld 78 (205)
T 1nsj_A 11 NLEDALFSV-----ESGADAVGFVFY-PKSKRYISP-EDARRISVELPP-FVFR----VGVFVNEEPEKILDVASYVQLN 78 (205)
T ss_dssp SHHHHHHHH-----HHTCSEEEEECC-TTCTTBCCH-HHHHHHHHHSCS-SSEE----EEEESSCCHHHHHHHHHHHTCS
T ss_pred cHHHHHHHH-----HcCCCEEEEEec-CCCCCcCCH-HHHHHHHHhCCC-CCCE----EEEEeCCCHHHHHHHHHhhCCC
Confidence 355555543 679999998843 2222 2333 344444433332 3443 8885 77889988888754444
Q ss_pred eec
Q 030178 179 IYQ 181 (182)
Q Consensus 179 ~~q 181 (182)
.+|
T Consensus 79 ~vQ 81 (205)
T 1nsj_A 79 AVQ 81 (205)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 82
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=39.33 E-value=49 Score=26.20 Aligned_cols=122 Identities=15% Similarity=0.054 Sum_probs=62.2
Q ss_pred CChHHHHHHHHHHHHcCCCeeeccCC--CCCCcHHHHHHHhhccCCCCCEEEEeccCCCcCCCCCCCCCCHHHHHHHHHH
Q 030178 34 KPEPDMIALIRHAINSGITFLDTSDI--YGPHTNEILLGKAFKGGFRERAELATKFGIGIVDGKYGYHGDPAYVRAACEA 111 (182)
Q Consensus 34 ~~~~~~~~~l~~a~~~G~~~~Dta~~--Yg~g~~e~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~ 111 (182)
.+.++..+.++.+.+.|++.|--... ++....-+.+.+.++...+..+.+..-.+ ..+.+.+++
T Consensus 99 ~s~eei~~~~~~~~~~g~~~i~~~gg~~~p~~~~~~~l~~ll~~ik~~g~~i~~t~G----------~l~~e~l~~---- 164 (369)
T 1r30_A 99 MEVEQVLESARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAMGLEACMTLG----------TLSESQAQR---- 164 (369)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEECCSSCCTTTHHHHHHHHHHHHHTTSEEEEECS----------SCCHHHHHH----
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEEeCCCCCCcCCHHHHHHHHHHHHHcCCeEEEecC----------CCCHHHHHH----
Confidence 46788888888888899887654332 23222223344444442212333332111 133443333
Q ss_pred HHHHhCCCccceEEeec-------CCCCCCHHHHHHHHHHHhHcCccccccceeeccchhHHHHHHHh
Q 030178 112 SLKRLDVDCIDLYYQHR-------IDTQTPIEVTVISLSLLPSFVKLKCSILYCGVVALVAKQMLLLF 172 (182)
Q Consensus 112 sL~~Lg~~~lDl~~lh~-------~d~~~~~~~~~~al~~l~~~G~ir~~~~~iGvs~~~~~~~~~l~ 172 (182)
|...|++++.+= +.. ......+++.+++++.+++.|.--...+-+|+ +-+.+++.+.+
T Consensus 165 -L~~aGvd~v~i~-les~~e~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~I~Gl-~et~ed~~~~l 229 (369)
T 1r30_A 165 -LANAGLDYYNHN-LDTSPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGL-GETVKDRAGLL 229 (369)
T ss_dssp -HHHHCCCEEECC-CBSCHHHHHHHCCSSCHHHHHHHHHHHHHHHCEEECCEEECS-SCCHHHHHHHH
T ss_pred -HHHCCCCEEeec-CcCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeeeeeeEeeC-CCCHHHHHHHH
Confidence 445565544321 111 01123467889999999988763222334666 55655554444
No 83
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=39.07 E-value=1.4e+02 Score=24.34 Aligned_cols=95 Identities=5% Similarity=-0.140 Sum_probs=47.2
Q ss_pred CCCEEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHHH-hCCCccceEEeec-----CCCCCC---HHHHHHHHHHHhHc
Q 030178 78 RERAELATKFGIGIVDGKYGYHGDPAYVRAACEASLKR-LDVDCIDLYYQHR-----IDTQTP---IEVTVISLSLLPSF 148 (182)
Q Consensus 78 r~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~-Lg~~~lDl~~lh~-----~d~~~~---~~~~~~al~~l~~~ 148 (182)
.+++.|..|+.+....... ...+.+...+ +-+.|+. .|++||++-.-.. .....+ ..+..+.+.+...
T Consensus 240 ~~~f~v~vRis~~~~~~~~-~G~~~ed~~~-la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~- 316 (419)
T 3l5a_A 240 PDNFILGFRATPEETRGSD-LGYTIDEFNQ-LIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLA- 316 (419)
T ss_dssp CTTCEEEEEECSCEEETTE-EEECHHHHHH-HHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHT-
T ss_pred CCCeeEEEecccccccCCC-CCCCHHHHHH-HHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcC-
Confidence 4567888898764211100 0134555444 4455566 8888877643211 000001 1123334443332
Q ss_pred Cccccccceeeccc-hhHHHHHHHhcCCCeee
Q 030178 149 VKLKCSILYCGVVA-LVAKQMLLLFTNIDFFI 179 (182)
Q Consensus 149 G~ir~~~~~iGvs~-~~~~~~~~l~~~~~~~~ 179 (182)
|.+.- |++.. .+++.++++++.+|++.
T Consensus 317 ~~iPV----I~~GgI~t~e~Ae~~L~~aDlVa 344 (419)
T 3l5a_A 317 GRIPL----IASGGINSPESALDALQHADMVG 344 (419)
T ss_dssp TSSCE----EECSSCCSHHHHHHHGGGCSEEE
T ss_pred CCCeE----EEECCCCCHHHHHHHHHhCCcHH
Confidence 33442 66665 57888888876666654
No 84
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=38.78 E-value=51 Score=24.74 Aligned_cols=40 Identities=8% Similarity=-0.123 Sum_probs=26.4
Q ss_pred hHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhcc
Q 030178 36 EPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKG 75 (182)
Q Consensus 36 ~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~ 75 (182)
.....+.++.+-+.|++.++..........-+.+.+.+++
T Consensus 40 ~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~ 79 (290)
T 2zvr_A 40 KGDLRKGMELAKRVGYQAVEIAVRDPSIVDWNEVKILSEE 79 (290)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECSCGGGSCHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHhCCCEEEEcCCCcchhhHHHHHHHHHH
Confidence 4567889999999999999876542111222345666655
No 85
>2xsa_A Ogoga, hyaluronoglucosaminidase; O-GLCNACYLATION, O-GLCNACASE, glycosyl hydrolase, hydrolase; 2.00A {Oceanicola granulosus} PDB: 2xsb_A*
Probab=38.78 E-value=61 Score=26.96 Aligned_cols=91 Identities=12% Similarity=0.135 Sum_probs=52.5
Q ss_pred CCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhccCCCCCEEEEeccCCCcCCCCCCCCCCHHHHHHHH
Q 030178 30 YGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKGGFRERAELATKFGIGIVDGKYGYHGDPAYVRAAC 109 (182)
Q Consensus 30 ~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~ 109 (182)
||.+.+.++-.++++..-+.|.|++ .|+ |.++.+...||.-. ++.+.+ +.+
T Consensus 10 YG~PWS~e~R~~l~~f~g~~kmNtY----iYA---------------PKDDpyhr~~WRe~---------Yp~eel-~~l 60 (447)
T 2xsa_A 10 YGRDWRRDERATVMDWIAAAGMNTY----IYG---------------PKDDVHVRARWRVP---------YDAAGL-ARL 60 (447)
T ss_dssp SSSCCCHHHHHHHHHHHHHTTCCEE----EEC---------------CTTCTTTTTTTTSC---------CCHHHH-HHH
T ss_pred CCCCCCHHHHHHHHHHHHHcCCceE----EEc---------------cCCChHHHHhhccc---------CCHHHH-HHH
Confidence 6778889999999999999999988 466 33444433343211 223333 234
Q ss_pred HHHHHHhCCCccceEEeecCCCC------CCHHHHHHHHHHHhHcC
Q 030178 110 EASLKRLDVDCIDLYYQHRIDTQ------TPIEVTVISLSLLPSFV 149 (182)
Q Consensus 110 ~~sL~~Lg~~~lDl~~lh~~d~~------~~~~~~~~al~~l~~~G 149 (182)
++..+.-+-..+++++-=.|.-+ .++....+.++++.+.|
T Consensus 61 ~eLv~~a~~~~V~Fv~aisPG~di~~s~~~d~~~L~~K~~ql~~lG 106 (447)
T 2xsa_A 61 TELRDAAAARGMVFYVSLAPCLDVTYSDPQDRAALLARVDQLARAG 106 (447)
T ss_dssp HHHHHHHHTTTCEEEEEECCCSSCCTTCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHHHHhC
Confidence 44444444455665554445221 11234455666666666
No 86
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=38.76 E-value=1.4e+02 Score=23.30 Aligned_cols=124 Identities=6% Similarity=-0.003 Sum_probs=67.3
Q ss_pred ChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhccCCCCCEEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHH
Q 030178 35 PEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKGGFRERAELATKFGIGIVDGKYGYHGDPAYVRAACEASLK 114 (182)
Q Consensus 35 ~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~ 114 (182)
+.++..+..+.+.+.|++.|..--........+.+ +++|+. .+++-|..-.. ...+.+...+-+ +.|+
T Consensus 139 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~d~~~v-~avr~~-g~~~~l~vDan---------~~~~~~~a~~~~-~~l~ 206 (345)
T 2zad_A 139 TVENRVKEAKKIFEEGFRVIKIKVGENLKEDIEAV-EEIAKV-TRGAKYIVDAN---------MGYTQKEAVEFA-RAVY 206 (345)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHH-HHHHHH-STTCEEEEECT---------TCSCHHHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHcCcCEEEEeecCCHHHHHHHH-HHHHhh-CCCCeEEEECC---------CCCCHHHHHHHH-HHHH
Confidence 45667788888899999998753211111122333 555554 33443332211 124555555544 3377
Q ss_pred HhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCccccccceeeccchhHHHHHHHhc--CCCeeee
Q 030178 115 RLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSILYCGVVALVAKQMLLLFT--NIDFFIY 180 (182)
Q Consensus 115 ~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~~iGvs~~~~~~~~~l~~--~~~~~~~ 180 (182)
.++++ ..++..|-+. +.++.+.+++++-.+.- -.|=+-++.+.++++++ .++++++
T Consensus 207 ~~~i~---~~~iE~P~~~----~~~~~~~~l~~~~~ipi---a~dE~~~~~~~~~~~i~~~~~d~v~i 264 (345)
T 2zad_A 207 QKGID---IAVYEQPVRR----EDIEGLKFVRFHSPFPV---AADESARTKFDVMRLVKEEAVDYVNI 264 (345)
T ss_dssp HTTCC---CSEEECCSCT----TCHHHHHHHHHHSSSCE---EESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred hcCCC---eeeeeCCCCc----ccHHHHHHHHHhCCCCE---EEeCCcCCHHHHHHHHHhCCCCEEEE
Confidence 77765 1145565432 33666677766544431 24445667888888774 4677654
No 87
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=38.17 E-value=71 Score=27.06 Aligned_cols=123 Identities=15% Similarity=0.065 Sum_probs=80.2
Q ss_pred HHHHHHHHcCCCeee--ccCCCC--------CCcHHHHHHHhhcc---CCCCCEEEEeccCCCcCCCC----------CC
Q 030178 41 ALIRHAINSGITFLD--TSDIYG--------PHTNEILLGKAFKG---GFRERAELATKFGIGIVDGK----------YG 97 (182)
Q Consensus 41 ~~l~~a~~~G~~~~D--ta~~Yg--------~g~~e~~lG~~l~~---~~r~~~~i~tK~~~~~~~~~----------~~ 97 (182)
+-+...-+.|+..+- ||..|. .|.-|.++..+-+. ..+..+|+++=++--....+ -.
T Consensus 112 e~f~~l~~~Gl~mYGQMTAGsw~YIG~QGIvqGTyeT~~~~~rk~~gg~L~G~~~lTaGLGGMgGAQplA~~mag~v~i~ 191 (552)
T 2fkn_A 112 EHFHELEKKGLMMYGQMTAGSWIYIGSQGILQGTYETFAELARQHFGGSLKGTLTLTAGLGGMGGAQPLSVTMNEGVVIA 191 (552)
T ss_dssp HHHHHHHHTTCCCBCTTTTTTTCCCTTHHHHHHHHHHHHHHHHHHSSSCCTTCEEEEECCSTTTTHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHcccccccCccccceeeecCcceeecHHHHHHHHHHHhcCCCCCceEEEEecCCccchhhHHHHHHcCceEEE
Confidence 445667788988773 665554 24556655422222 35677888887763210000 00
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCccccccceeeccchhHHHHHHHhc---C
Q 030178 98 YHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSILYCGVVALVAKQMLLLFT---N 174 (182)
Q Consensus 98 ~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~~iGvs~~~~~~~~~l~~---~ 174 (182)
...+++.|+ +|+.+.|+|.+. .+++++++.+++.+++|...+ ||+-.--.+-++++++ .
T Consensus 192 ~Evd~~ri~-------~R~~~gyld~~~-------~~ldeal~~~~~a~~~~~~~S----Ig~~GNaadv~~~l~~~~i~ 253 (552)
T 2fkn_A 192 VEVDEKRID-------KRIETKYCDRKT-------ASIEEALAWAEEAKLAGKPLS----IALLGNAAEVHHTLLNRGVK 253 (552)
T ss_dssp EESCHHHHH-------HHHHTTSCSEEE-------SCHHHHHHHHHHHHHTTCCEE----EEEESCHHHHHHHHHTTTCC
T ss_pred EEECHHHHH-------HHHhCCcceeEc-------CCHHHHHHHHHHHHHcCCceE----EEEeccHHHHHHHHHHCCCC
Confidence 123444444 477778998632 458899999999999999998 9999888999999887 3
Q ss_pred CCeeeec
Q 030178 175 IDFFIYQ 181 (182)
Q Consensus 175 ~~~~~~q 181 (182)
.|+++=|
T Consensus 254 ~DlvtDQ 260 (552)
T 2fkn_A 254 IDIVTDQ 260 (552)
T ss_dssp CSEECCC
T ss_pred CCCCCCC
Confidence 5777655
No 88
>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} SCOP: e.51.1.1 PDB: 1w1u_A* 1uwl_A* 2v7g_A*
Probab=37.52 E-value=58 Score=27.60 Aligned_cols=123 Identities=12% Similarity=0.083 Sum_probs=79.8
Q ss_pred HHHHHHHHcCCCeee--ccCCCC--------CCcHHHHHHHhhcc---CCCCCEEEEeccCCCcCCCC----------CC
Q 030178 41 ALIRHAINSGITFLD--TSDIYG--------PHTNEILLGKAFKG---GFRERAELATKFGIGIVDGK----------YG 97 (182)
Q Consensus 41 ~~l~~a~~~G~~~~D--ta~~Yg--------~g~~e~~lG~~l~~---~~r~~~~i~tK~~~~~~~~~----------~~ 97 (182)
+-+...-+.|+..+- ||..|. .|.-|.++..+-+. ..+..+|+++=++--....+ -.
T Consensus 116 e~f~~l~~~Gl~mYGQMTAGsw~YIG~QGIvqGTyeT~~~~~rk~~gg~L~G~~~lTaGLGGMgGAQplA~~mag~v~i~ 195 (557)
T 1uwk_A 116 EHFNELDAKGLAMYGQMTAGSWIYIGSQGIVQGTYETFVEAGRQHYGGSLKGKWVLTAGLGGMGGAQPLAATLAGACSLN 195 (557)
T ss_dssp HHHHHHHHTTCCCBCTTTTTTTCCCTTHHHHHHHHHHHHHHHHHHTSSCCTTCEEEEECCSTTTTHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHcccccccCccccceeeecCcceeecHHHHHHHHHHHhcCCCCCceEEEEecCCccchhhHHHHHHcCceEEE
Confidence 445667788988773 665554 24556655422222 35677888887763210000 00
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCccccccceeeccchhHHHHHHHhc---C
Q 030178 98 YHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSILYCGVVALVAKQMLLLFT---N 174 (182)
Q Consensus 98 ~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~~iGvs~~~~~~~~~l~~---~ 174 (182)
...+++.|+ +|+.+.|+|.+ ..+++++++.+++.+++|...+ ||+-.--.+-++++++ .
T Consensus 196 ~Evd~~ri~-------~R~~~gyld~~-------~~~ldeal~~~~~a~~~~~~~S----Ig~~GNaadv~~~l~~~~i~ 257 (557)
T 1uwk_A 196 IESQQSRID-------FRLETRYVDEQ-------ATDLDDALVRIAKYTAEGKAIS----IALHGNAAEILPELVKRGVR 257 (557)
T ss_dssp EESCHHHHH-------HHHHTTSCCEE-------CSSHHHHHHHHHHHHHTTCCCE----EEEESCHHHHHHHHHHHTCC
T ss_pred EEECHHHHH-------HHHhCCCceeE-------cCCHHHHHHHHHHHHHcCCceE----EEEeccHHHHHHHHHHCCCC
Confidence 123444444 46777888852 2458899999999999999998 9999888888888887 3
Q ss_pred CCeeeec
Q 030178 175 IDFFIYQ 181 (182)
Q Consensus 175 ~~~~~~q 181 (182)
.|+++=|
T Consensus 258 ~DlvtDQ 264 (557)
T 1uwk_A 258 PDMVTDQ 264 (557)
T ss_dssp CSEECCC
T ss_pred CCCCCCC
Confidence 6777655
No 89
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=37.07 E-value=1.5e+02 Score=23.21 Aligned_cols=123 Identities=11% Similarity=0.044 Sum_probs=66.9
Q ss_pred ChHHHHHHHHHHHHcCCCeeeccCCCCC-CcHHHHHHHhhccCCCCCEEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHH
Q 030178 35 PEPDMIALIRHAINSGITFLDTSDIYGP-HTNEILLGKAFKGGFRERAELATKFGIGIVDGKYGYHGDPAYVRAACEASL 113 (182)
Q Consensus 35 ~~~~~~~~l~~a~~~G~~~~Dta~~Yg~-g~~e~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL 113 (182)
+.++..+..+.+.+.|++.|..--..++ ....+.+ +++++.-.+++-|..+... ..+.+...+-++. |
T Consensus 144 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v-~avr~a~g~~~~l~vDan~---------~~~~~~a~~~~~~-l 212 (359)
T 1mdl_A 144 GVKLATERAVTAAELGFRAVKTRIGYPALDQDLAVV-RSIRQAVGDDFGIMVDYNQ---------SLDVPAAIKRSQA-L 212 (359)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSHHHHHHHH-HHHHHHHCSSSEEEEECTT---------CSCHHHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHH-HHHHHHhCCCCEEEEECCC---------CCCHHHHHHHHHH-H
Confidence 4466777788888999999986321111 0122223 3344411224444444321 1455555554444 7
Q ss_pred HHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCccccccceeeccchhHHHHHHHhc--CCCeeee
Q 030178 114 KRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSILYCGVVALVAKQMLLLFT--NIDFFIY 180 (182)
Q Consensus 114 ~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~~iGvs~~~~~~~~~l~~--~~~~~~~ 180 (182)
+.++++++ ..|-+. +.++.+.++++.-.+.- ..+=+-++.+.++++++ .+|++.+
T Consensus 213 ~~~~i~~i-----E~P~~~----~~~~~~~~l~~~~~iPI---~~de~~~~~~~~~~~i~~~~~d~v~i 269 (359)
T 1mdl_A 213 QQEGVTWI-----EEPTLQ----HDYEGHQRIQSKLNVPV---QMGENWLGPEEMFKALSIGACRLAMP 269 (359)
T ss_dssp HHHTCSCE-----ECCSCT----TCHHHHHHHHHTCSSCE---EECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred HHhCCCeE-----ECCCCh----hhHHHHHHHHHhCCCCE---EeCCCCCCHHHHHHHHHcCCCCEEee
Confidence 77887655 344322 34777777777654542 23444567888888865 3666543
No 90
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=36.87 E-value=1.6e+02 Score=23.43 Aligned_cols=61 Identities=13% Similarity=0.022 Sum_probs=35.9
Q ss_pred HHHHHHHHhCCCccceEEeecCC----CCCCHHHHHHHHHHHhHcCccccccceeeccchhHHHHHHHhcC--CCeee
Q 030178 108 ACEASLKRLDVDCIDLYYQHRID----TQTPIEVTVISLSLLPSFVKLKCSILYCGVVALVAKQMLLLFTN--IDFFI 179 (182)
Q Consensus 108 ~~~~sL~~Lg~~~lDl~~lh~~d----~~~~~~~~~~al~~l~~~G~ir~~~~~iGvs~~~~~~~~~l~~~--~~~~~ 179 (182)
.+-+.|+..|++|+++ |... +..+ ++.+.++++.=.+-- ++...++++.++++++. +|++.
T Consensus 255 ~~a~~l~~~G~d~i~v---~~~~~~~~~~~~----~~~~~~v~~~~~iPv----i~~Ggit~~~a~~~l~~g~aD~V~ 321 (364)
T 1vyr_A 255 YLIEELAKRGIAYLHM---SETDLAGGKPYS----EAFRQKVRERFHGVI----IGAGAYTAEKAEDLIGKGLIDAVA 321 (364)
T ss_dssp HHHHHHHHTTCSEEEE---ECCBTTBCCCCC----HHHHHHHHHHCCSEE----EEESSCCHHHHHHHHHTTSCSEEE
T ss_pred HHHHHHHHhCCCEEEE---ecCcccCCCccc----HHHHHHHHHHCCCCE----EEECCcCHHHHHHHHHCCCccEEE
Confidence 3566678888777765 4321 1112 344455554433442 66666788888888873 67764
No 91
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=36.59 E-value=69 Score=25.20 Aligned_cols=103 Identities=13% Similarity=0.062 Sum_probs=59.4
Q ss_pred CCCChHHHHHHHHHHHHcCCCee---eccCCCCCCcHHHHHHHhhccCCC-CCEEEEeccCCCcCCCCCCCCCCHHHHHH
Q 030178 32 PPKPEPDMIALIRHAINSGITFL---DTSDIYGPHTNEILLGKAFKGGFR-ERAELATKFGIGIVDGKYGYHGDPAYVRA 107 (182)
Q Consensus 32 ~~~~~~~~~~~l~~a~~~G~~~~---Dta~~Yg~g~~e~~lG~~l~~~~r-~~~~i~tK~~~~~~~~~~~~~~~~~~i~~ 107 (182)
...+.+...++++.+.+.|...| ||...--|....+++....+..+. +++.|......... ........
T Consensus 146 ~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~i~~H~Hnd~G-------lA~AN~la 218 (325)
T 3eeg_A 146 GRADQAFLARMVEAVIEAGADVVNIPDTTGYMLPWQYGERIKYLMDNVSNIDKAILSAHCHNDLG-------LATANSLA 218 (325)
T ss_dssp GGSCHHHHHHHHHHHHHHTCSEEECCBSSSCCCHHHHHHHHHHHHHHCSCGGGSEEEECBCCTTS-------CHHHHHHH
T ss_pred ccchHHHHHHHHHHHHhcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCCCceEEEEEeCCCCC-------HHHHHHHH
Confidence 34578889999999999999877 555443333444555444333442 34667766665542 22233333
Q ss_pred HHHHHHHHhCCCccceEEeecC--CCCCCHHHHHHHHHHHh
Q 030178 108 ACEASLKRLDVDCIDLYYQHRI--DTQTPIEVTVISLSLLP 146 (182)
Q Consensus 108 ~~~~sL~~Lg~~~lDl~~lh~~--d~~~~~~~~~~al~~l~ 146 (182)
+++ .|++++|.-+.-.- .-..+.++.+.+|+...
T Consensus 219 A~~-----aGa~~vd~tv~GlGer~GN~~lE~vv~~L~~~~ 254 (325)
T 3eeg_A 219 ALQ-----NGARQVECTINGIGERAGNTALEEVVMAMECHK 254 (325)
T ss_dssp HHH-----HTCCEEEEBGGGCCSTTCCCBHHHHHHHHHHTH
T ss_pred HHH-----hCCCEEEEecccccccccchhHHHHHHHHHhhh
Confidence 332 37777775443321 12355778888777643
No 92
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=36.41 E-value=1.4e+02 Score=22.80 Aligned_cols=22 Identities=9% Similarity=-0.014 Sum_probs=16.4
Q ss_pred ChHHHHHHHHHHHHcCCCeeec
Q 030178 35 PEPDMIALIRHAINSGITFLDT 56 (182)
Q Consensus 35 ~~~~~~~~l~~a~~~G~~~~Dt 56 (182)
+.+++.+.++.+.+.|...+.-
T Consensus 50 ~~~e~~~~~~~~~~~gaD~VEl 71 (276)
T 3o1n_A 50 TITDVKSEALAYREADFDILEW 71 (276)
T ss_dssp SHHHHHHHHHHHTTSCCSEEEE
T ss_pred CHHHHHHHHHHHhhCCCCEEEE
Confidence 5677777777777789887753
No 93
>1x87_A Urocanase protein; structural genomics, protein STR initiative, MCSG, PSI, midwest center for structural genomi; HET: MSE NAD; 2.40A {Geobacillus stearothermophilus} SCOP: e.51.1.1
Probab=36.09 E-value=72 Score=27.02 Aligned_cols=120 Identities=17% Similarity=0.121 Sum_probs=67.1
Q ss_pred HHHHHcCCCee--eccCCCC--------CCcHHHHHHHhhcc---CCCCCEEEEeccCCCcCCCC----------CCCCC
Q 030178 44 RHAINSGITFL--DTSDIYG--------PHTNEILLGKAFKG---GFRERAELATKFGIGIVDGK----------YGYHG 100 (182)
Q Consensus 44 ~~a~~~G~~~~--Dta~~Yg--------~g~~e~~lG~~l~~---~~r~~~~i~tK~~~~~~~~~----------~~~~~ 100 (182)
...-+.|+..+ -||..|. .|.-|.++..+-+. ..+..+|+++=++--....+ -....
T Consensus 114 ~~l~~~Gl~mYGQMTAGsw~YIG~QGIvqGTyeT~~~~~rk~~gg~L~G~~~lTaGLGGMgGAQplA~~mag~v~i~~Ev 193 (551)
T 1x87_A 114 HELDKKGLIMYGQMTAGSWIYIGSQGIVQGTYETFAEVARQHFGGTLAGTITLTAGLGGMGGAQPLAVTMNGGVCLAIEV 193 (551)
T ss_dssp ----------------CCSCCCTTHHHHHHHHHHHHHHHHHHSTTCCTTCEEEEECCSTTGGGHHHHHHHTTCEEEEEES
T ss_pred HHHHHcccccccCccccceeeecCcceeecHHHHHHHHHHHhcCCCCCceEEEEecCCccchhhHHHHHHcCceEEEEEE
Confidence 33445566655 3554443 24455544422222 34677888877653210000 00123
Q ss_pred CHHHHHHHHHHHHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCccccccceeeccchhHHHHHHHhc---CCCe
Q 030178 101 DPAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSILYCGVVALVAKQMLLLFT---NIDF 177 (182)
Q Consensus 101 ~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~~iGvs~~~~~~~~~l~~---~~~~ 177 (182)
+++.|+ +|+.+.|+|.+. .+++++++.+++.+++|...+ ||+-.--.+-++++++ ..|+
T Consensus 194 d~~ri~-------~R~~~gyld~~~-------~~ldeal~~~~~a~~~~~~~S----Ig~~GNaadv~~~l~~~~i~~Dl 255 (551)
T 1x87_A 194 DPARIQ-------RRIDTNYLDTMT-------DSLDAALEMAKQAKEEKKALS----IGLVGNAAEVLPRLVETGFVPDV 255 (551)
T ss_dssp CHHHHH-------HHHHTTSCSEEE-------SCHHHHHHHHHHHHHTTCCEE----EEEESCHHHHHHHHHHTTCCCSE
T ss_pred CHHHHH-------HHHhCCCceeEc-------CCHHHHHHHHHHHHHcCCceE----EEEeccHHHHHHHHHHCCCCCCC
Confidence 444454 467778998632 458899999999999999998 9999888888888887 3577
Q ss_pred eeec
Q 030178 178 FIYQ 181 (182)
Q Consensus 178 ~~~q 181 (182)
++=|
T Consensus 256 vtDQ 259 (551)
T 1x87_A 256 LTDQ 259 (551)
T ss_dssp ECCC
T ss_pred CCCC
Confidence 7655
No 94
>3guv_A Site-specific recombinase, resolvase family prote; structural genomics, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae}
Probab=35.59 E-value=42 Score=23.23 Aligned_cols=45 Identities=2% Similarity=0.085 Sum_probs=31.7
Q ss_pred HHHHHHHHHhCCCc--cceEEeecCCCCCC-HHHHHHHHHHHhHcCcc
Q 030178 107 AACEASLKRLDVDC--IDLYYQHRIDTQTP-IEVTVISLSLLPSFVKL 151 (182)
Q Consensus 107 ~~~~~sL~~Lg~~~--lDl~~lh~~d~~~~-~~~~~~al~~l~~~G~i 151 (182)
..+.+.|+.+.... +|.+++...|.... ..+....++.|.+.|.-
T Consensus 60 p~l~~ll~~~~~g~~~~d~lvv~~ldRl~R~~~~~~~~~~~l~~~gv~ 107 (167)
T 3guv_A 60 IQFNRMMEDIKSGKDGVSFVLVFKLSRFARNAADVLSTLQIMQDYGVN 107 (167)
T ss_dssp HHHHHHHHHHHTCTTCCSEEEESCGGGTCSSHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHcCCCCccEEEEEeCchhcCCHHHHHHHHHHHHHCCCE
Confidence 34555555665444 89999998877644 56778888888888754
No 95
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=34.43 E-value=2.2e+02 Score=24.39 Aligned_cols=132 Identities=10% Similarity=0.021 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHcCCCeeec--cC-----------------CCCCCcHH---HHHHH---hhccCCCCCEEEEeccCCCcC
Q 030178 38 DMIALIRHAINSGITFLDT--SD-----------------IYGPHTNE---ILLGK---AFKGGFRERAELATKFGIGIV 92 (182)
Q Consensus 38 ~~~~~l~~a~~~G~~~~Dt--a~-----------------~Yg~g~~e---~~lG~---~l~~~~r~~~~i~tK~~~~~~ 92 (182)
+..+.-+.|.++|++.++. +. .|| |.-| +++-+ ++++.-..++.|..|+.+...
T Consensus 142 ~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yG-gs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~ 220 (671)
T 1ps9_A 142 NFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWG-GDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDL 220 (671)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTS-SSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECC
T ss_pred HHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCC-CcHHHHHHHHHHHHHHHHHHcCCCceEEEEECcccc
Confidence 4445566778899998875 22 233 1112 12222 222222345677777765321
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCCC-------CCCHHHHHHHHHHHhHcCccccccceeeccch-h
Q 030178 93 DGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDT-------QTPIEVTVISLSLLPSFVKLKCSILYCGVVAL-V 164 (182)
Q Consensus 93 ~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~-------~~~~~~~~~al~~l~~~G~ir~~~~~iGvs~~-~ 164 (182)
.. ...+.+... .+-+.|+..|++|+++-. .+.+. ..+....++.+.++++.=.+-- +++... +
T Consensus 221 ~~---~g~~~~~~~-~~a~~l~~~g~d~i~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~iPv----i~~Ggi~~ 291 (671)
T 1ps9_A 221 VE---DGGTFAETV-ELAQAIEAAGATIINTGI-GWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPL----VTTNRIND 291 (671)
T ss_dssp ST---TCCCHHHHH-HHHHHHHHHTCSEEEEEE-CBTTCSSCSSSTTSCTTTTHHHHHHHTTSCSSCE----EECSSCCS
T ss_pred CC---CCCCHHHHH-HHHHHHHhcCCCEEEcCC-CccccccccccccCCcchHHHHHHHHHHhcCceE----EEeCCCCC
Confidence 00 123455443 345667888988877521 11111 0111123456666666544543 666665 7
Q ss_pred HHHHHHHhcC--CCeee
Q 030178 165 AKQMLLLFTN--IDFFI 179 (182)
Q Consensus 165 ~~~~~~l~~~--~~~~~ 179 (182)
++.++++++. +|++.
T Consensus 292 ~~~a~~~l~~g~aD~V~ 308 (671)
T 1ps9_A 292 PQVADDILSRGDADMVS 308 (671)
T ss_dssp HHHHHHHHHTTSCSEEE
T ss_pred HHHHHHHHHcCCCCEEE
Confidence 8888888763 67664
No 96
>2gax_A Hypothetical protein ATU0240; MCSG, structural genomics, agrobacterium tumfaciens, hypothe protein, PSI; 1.80A {Agrobacterium tumefaciens str} SCOP: c.131.1.1
Probab=34.23 E-value=76 Score=21.61 Aligned_cols=48 Identities=8% Similarity=-0.011 Sum_probs=32.9
Q ss_pred ChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhccCCCCCEE
Q 030178 35 PEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKGGFRERAE 82 (182)
Q Consensus 35 ~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~~~r~~~~ 82 (182)
+.++..++.+.|.+.|+.+.+..+.--...+.....+++++.+.+++-
T Consensus 64 ~~~~L~~l~~~a~~~~l~~~~f~d~~~~~~~~~~~~~~~~~~~~~~l~ 111 (135)
T 2gax_A 64 DQEALRKIHQRSLERDITTSLYIEEMFATGHDAANRQVFSHFSPDTAK 111 (135)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEGGGGGCCCHHHHHHHHTTCCTTTCC
T ss_pred CHHHHHHHHHHHHHCCCcEEeccHHhhhCCCHHHHHHHHhcCCcccce
Confidence 458899999999999999877554222122555566777776666544
No 97
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=33.34 E-value=56 Score=24.24 Aligned_cols=29 Identities=34% Similarity=0.581 Sum_probs=25.3
Q ss_pred ChHHHHHHHHHHHHcCCCeeeccCCCCCC
Q 030178 35 PEPDMIALIRHAINSGITFLDTSDIYGPH 63 (182)
Q Consensus 35 ~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g 63 (182)
++++...+.+.|.++|..|+=|+..|++|
T Consensus 131 ~~e~i~~a~~ia~eaGADfVKTsTGf~~~ 159 (220)
T 1ub3_A 131 SPEEIARLAEAAIRGGADFLKTSTGFGPR 159 (220)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECCCSSSSC
T ss_pred CHHHHHHHHHHHHHhCCCEEEeCCCCCCC
Confidence 56889999999999999999999888744
No 98
>3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus}
Probab=32.79 E-value=2.7e+02 Score=24.86 Aligned_cols=90 Identities=9% Similarity=-0.070 Sum_probs=54.1
Q ss_pred CCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhccCCCCCEEEEeccCCCcC-CC-CCC-CCCCHHHHH
Q 030178 30 YGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKGGFRERAELATKFGIGIV-DG-KYG-YHGDPAYVR 106 (182)
Q Consensus 30 ~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~~~r~~~~i~tK~~~~~~-~~-~~~-~~~~~~~i~ 106 (182)
.|...+++...+-|+.+-++|+|.+=|+. |. .+++++-.+ .+-.+++..-...... +. ... ...-.+..+
T Consensus 300 ~G~a~~~~~~~~dl~~~K~~G~N~iR~~h-~p--~~~~~~dlc----De~GilV~~E~~~~w~~~~~~~~~~~~~~~~~~ 372 (801)
T 3gm8_A 300 VGAAVPDDLLHYRLKLLKDMGCNAIRTSH-NP--FSPAFYNLC----DTMGIMVLNEGLDGWNQPKAADDYGNYFDEWWQ 372 (801)
T ss_dssp GTTCCCHHHHHHHHHHHHHTTCCEEEETT-SC--CCHHHHHHH----HHHTCEEEEECCSSSSSCSSTTSGGGTHHHHHH
T ss_pred cCccCCHHHHHHHHHHHHHCCCcEEEecC-CC--CcHHHHHHH----HHCCCEEEECCchhhcCCCCcccccHHHHHHHH
Confidence 45567889999999999999999999986 43 366655444 3445555443321110 00 000 011245566
Q ss_pred HHHHHHHHHhCCCccceEEee
Q 030178 107 AACEASLKRLDVDCIDLYYQH 127 (182)
Q Consensus 107 ~~~~~sL~~Lg~~~lDl~~lh 127 (182)
+.+++..+++. .+.-+++..
T Consensus 373 ~~~~~mv~r~r-NHPSIi~Ws 392 (801)
T 3gm8_A 373 KDMTDFIKRDR-NHPSIIMWS 392 (801)
T ss_dssp HHHHHHHHHHT-TCTTEEEEE
T ss_pred HHHHHHHHhcC-CCCeEEEEE
Confidence 67888888886 566655543
No 99
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=32.57 E-value=1.9e+02 Score=23.02 Aligned_cols=122 Identities=11% Similarity=0.055 Sum_probs=64.6
Q ss_pred ChHHHHHHHHHHHHcCCCeeeccCCCCC-CcHHHHHHHhhcc-CCCCCEEEEeccCCCcCCCCCCCCCCHHHHHHHHHHH
Q 030178 35 PEPDMIALIRHAINSGITFLDTSDIYGP-HTNEILLGKAFKG-GFRERAELATKFGIGIVDGKYGYHGDPAYVRAACEAS 112 (182)
Q Consensus 35 ~~~~~~~~l~~a~~~G~~~~Dta~~Yg~-g~~e~~lG~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~s 112 (182)
+.++..+..+.+.+.|++.|..--.-++ ....+.+ +++++ .+ +++.|..... ...+.+...+-++.
T Consensus 165 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v-~avr~a~g-~~~~l~vDan---------~~~~~~~a~~~~~~- 232 (392)
T 1tzz_A 165 GLSMLRGEMRGYLDRGYNVVKMKIGGAPIEEDRMRI-EAVLEEIG-KDAQLAVDAN---------GRFNLETGIAYAKM- 232 (392)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECSSSCHHHHHHHH-HHHHHHHT-TTCEEEEECT---------TCCCHHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHH-HHHHHhcC-CCCeEEEECC---------CCCCHHHHHHHHHH-
Confidence 5577778888888999999874321111 1122323 34444 22 2333333321 11445555444433
Q ss_pred HHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCccccccceeeccchhHHHHHHHhc------CCCeeee
Q 030178 113 LKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSILYCGVVALVAKQMLLLFT------NIDFFIY 180 (182)
Q Consensus 113 L~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~~iGvs~~~~~~~~~l~~------~~~~~~~ 180 (182)
|+.++++ ++..|-+. +.++.+.+++++-.+.- -.|=+-++.+.++++++ .++++++
T Consensus 233 l~~~~i~-----~iEqP~~~----~d~~~~~~l~~~~~iPI---a~dE~~~~~~~~~~~i~~~~~~~~~d~v~i 294 (392)
T 1tzz_A 233 LRDYPLF-----WYEEVGDP----LDYALQAALAEFYPGPM---ATGENLFSHQDARNLLRYGGMRPDRDWLQF 294 (392)
T ss_dssp HTTSCCS-----EEECCSCT----TCHHHHHHHTTTCCSCE---EECTTCCSHHHHHHHHHHSCCCTTTCEECC
T ss_pred HHHcCCC-----eecCCCCh----hhHHHHHHHHhhCCCCE---EECCCCCCHHHHHHHHHcCCCccCCcEEEE
Confidence 5655554 44555332 34777777776654442 23444567888887766 4566543
No 100
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=32.36 E-value=2.5e+02 Score=24.47 Aligned_cols=103 Identities=9% Similarity=-0.040 Sum_probs=62.1
Q ss_pred CcccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhccCCCCCEEEEeccCCCcC
Q 030178 13 GLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKGGFRERAELATKFGIGIV 92 (182)
Q Consensus 13 g~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~~~r~~~~i~tK~~~~~~ 92 (182)
|.++-.-|..-...-...|...+++...+-|+.+-++|+|.+=|+. |. .+++++-.+ .+-.++|..-+.....
T Consensus 294 G~~i~l~G~n~h~~~~~~G~~~~~e~~~~dl~l~k~~G~N~iR~~h-~p--~~~~~~dlc----De~Gi~V~~E~~~~~~ 366 (692)
T 3fn9_A 294 GEKYSMYGVTRHQDWWGLGSALKNEHHDFDLAAIMDVGATTVRFAH-YQ--QSDYLYSRC----DTLGLIIWAEIPCVNR 366 (692)
T ss_dssp TEECCCEEEECCSCBTTTBTCCCHHHHHHHHHHHHHHTCCEEEETT-SC--CCHHHHHHH----HHHTCEEEEECCCBSC
T ss_pred CeeeeeeccccCCCcccccccccHHHHHHHHHHHHHCCCCEEEecC-CC--CcHHHHHHH----HHCCCEEEEcccccCC
Confidence 4555444444333212235567889999999999999999999985 54 356655444 3444555433322110
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEee
Q 030178 93 DGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQH 127 (182)
Q Consensus 93 ~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh 127 (182)
..... .+..++.+++..++.. .+.-+++..
T Consensus 367 ---~~~~~-~~~~~~~~~~~v~r~r-NHPSIi~Ws 396 (692)
T 3fn9_A 367 ---VTGYE-TENAQSQLRELIRQSF-NHPSIYVWG 396 (692)
T ss_dssp ---CCSSC-HHHHHHHHHHHHHHHT-TCTTEEEEE
T ss_pred ---CCCHH-HHHHHHHHHHHHHHhc-CCCcceEEE
Confidence 00112 6778888888888886 466655543
No 101
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=32.34 E-value=63 Score=22.71 Aligned_cols=51 Identities=8% Similarity=-0.065 Sum_probs=35.9
Q ss_pred ccceEEeecCCCCCCHHHHHHHHHHHhHcCccccccceeeccchhHHHHHHHhcCCCe
Q 030178 120 CIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSILYCGVVALVAKQMLLLFTNIDF 177 (182)
Q Consensus 120 ~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~~iGvs~~~~~~~~~l~~~~~~ 177 (182)
.=|++++=..... ..++.++++.+++.|.-- |++++.....+.++.+..|+
T Consensus 109 ~~DvvI~iS~SG~--t~~~i~~~~~ak~~g~~v-----I~IT~~~~s~la~~~~~ad~ 159 (196)
T 2yva_A 109 AGDVLLAISTRGN--SRDIVKAVEAAVTRDMTI-----VALTGYDGGELAGLLGPQDV 159 (196)
T ss_dssp TTCEEEEECSSSC--CHHHHHHHHHHHHTTCEE-----EEEECTTCHHHHTTCCTTSE
T ss_pred CCCEEEEEeCCCC--CHHHHHHHHHHHHCCCEE-----EEEeCCCCchhhhcccCCCE
Confidence 3566666554333 358899999999999754 99999887777776433444
No 102
>1vpy_A Protein (hypothetical protein EF0366); TIM alpha/beta barrel fold, structural genomics, joint cente structural genomics, JCSG; 2.52A {Enterococcus faecalis} SCOP: c.1.32.1 PDB: 1ztv_A
Probab=31.98 E-value=1.7e+02 Score=22.45 Aligned_cols=126 Identities=13% Similarity=0.051 Sum_probs=69.2
Q ss_pred cccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeec-cCCCCCCcHHHHHHHhhccCCCCCEEEEeccCCCcC
Q 030178 14 LEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDT-SDIYGPHTNEILLGKAFKGGFRERAELATKFGIGIV 92 (182)
Q Consensus 14 ~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dt-a~~Yg~g~~e~~lG~~l~~~~r~~~~i~tK~~~~~~ 92 (182)
-.+=.||++.|+...+++. ...+-|....+ -.+.+.. +..|... .++.+.++.++. .+++..+.|......
T Consensus 11 ~~~i~iG~sgWs~~~w~~~-----~~~~~L~~Ya~-~F~tVEiNsTFY~~p-~~~t~~~W~~~t-P~~F~F~vKa~r~iT 82 (289)
T 1vpy_A 11 HHMIRLGLTSFSEHDYLTG-----KKRSTLYEYAS-HLPLVEMDTAYYGIP-PKERVAEWVKAV-PENFRFVMKVYSGIS 82 (289)
T ss_dssp CCEEEEEESTTC---------------CCHHHHHH-HCSEEEECHHHHSCC-CHHHHHHHHHTS-CTTCEEEEECCTTTT
T ss_pred cceEEEecCCCCChhhcCC-----ChhhHHHHHHh-hCCEEEECccccCCC-CHHHHHHHHHhC-CCCcEEEEEechhee
Confidence 4555678888876443211 11222333333 3666654 3367654 456688888774 467888999864321
Q ss_pred CCCCC--CCCCHHHHHHHHHHHHHHh--CCCccceEEeecCCCCCCHHHHHHHHHHHhHc
Q 030178 93 DGKYG--YHGDPAYVRAACEASLKRL--DVDCIDLYYQHRIDTQTPIEVTVISLSLLPSF 148 (182)
Q Consensus 93 ~~~~~--~~~~~~~i~~~~~~sL~~L--g~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~ 148 (182)
-.... .....+.+-+.+.+.++-| + +.+..+++..|.......+.++.|..+.+.
T Consensus 83 H~~rl~~~~~~~~~~~~~F~~~~~pL~~~-~kLG~vL~Q~Ppsf~~~~~~~~~L~~~~~~ 141 (289)
T 1vpy_A 83 CQGEWQTYYASEEEMITAFLESMAPLIES-KKLFAFLVQFSGTFGCTKENVAYLQKIRHW 141 (289)
T ss_dssp TCSCGGGTCSSHHHHHHHHHHHTHHHHTT-TCEEEEEEECCTTCCSCHHHHHHHHHHHHH
T ss_pred cccccCCccchhHHHHHHHHHHHHhhccC-CCEEEEEEEcCCCCCCCHHHHHHHHHHHHh
Confidence 11000 0122234445666777777 5 789999999987655445566666666543
No 103
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=31.98 E-value=1.9e+02 Score=23.01 Aligned_cols=123 Identities=7% Similarity=0.036 Sum_probs=65.7
Q ss_pred ChHHHHHHHHHHHHcCCCeeeccCC----CCC------------Cc---HHHHHHHhhccCCCCCEEEEeccCCCcCCCC
Q 030178 35 PEPDMIALIRHAINSGITFLDTSDI----YGP------------HT---NEILLGKAFKGGFRERAELATKFGIGIVDGK 95 (182)
Q Consensus 35 ~~~~~~~~l~~a~~~G~~~~Dta~~----Yg~------------g~---~e~~lG~~l~~~~r~~~~i~tK~~~~~~~~~ 95 (182)
+.++..+..+.+.+.|++.|..-.. +|. .. ..+.+ +++|+.-.+++.|......
T Consensus 152 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~~~~~~~~~~~~~e~v-~avR~a~G~d~~l~vDan~------ 224 (407)
T 2o56_A 152 EPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQNLNGPLTDKILRLGYDRM-AAIRDAVGPDVDIIAEMHA------ 224 (407)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCSCCCSSCCHHHHHHHHHHH-HHHHHHHCTTSEEEEECTT------
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccCCcCccccCcccCCCchhHHHHHHHHH-HHHHHhcCCCCEEEEECCC------
Confidence 5677778888899999999875321 121 00 11222 2333311224444444321
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCccccccceeeccchhHHHHHHHhc--
Q 030178 96 YGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSILYCGVVALVAKQMLLLFT-- 173 (182)
Q Consensus 96 ~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~~iGvs~~~~~~~~~l~~-- 173 (182)
..+.+...+-++. |+.++++++ ..|-+. +.++.+.++++.-.+.- -.|=+-++.+.++++++
T Consensus 225 ---~~~~~~a~~~~~~-l~~~~i~~i-----E~P~~~----~~~~~~~~l~~~~~iPI---a~dE~~~~~~~~~~~i~~~ 288 (407)
T 2o56_A 225 ---FTDTTSAIQFGRM-IEELGIFYY-----EEPVMP----LNPAQMKQVADKVNIPL---AAGERIYWRWGYRPFLENG 288 (407)
T ss_dssp ---CSCHHHHHHHHHH-HGGGCCSCE-----ECSSCS----SSHHHHHHHHHHCCSCE---EECTTCCHHHHHHHHHHTT
T ss_pred ---CCCHHHHHHHHHH-HHhcCCCEE-----eCCCCh----hhHHHHHHHHHhCCCCE---EeCCCcCCHHHHHHHHHcC
Confidence 2456665555443 777776644 445332 23666666666544431 13444567888888875
Q ss_pred CCCeeee
Q 030178 174 NIDFFIY 180 (182)
Q Consensus 174 ~~~~~~~ 180 (182)
.+|++++
T Consensus 289 ~~d~v~i 295 (407)
T 2o56_A 289 SLSVIQP 295 (407)
T ss_dssp CCSEECC
T ss_pred CCCEEec
Confidence 3666543
No 104
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=31.53 E-value=1.8e+02 Score=22.55 Aligned_cols=124 Identities=11% Similarity=0.048 Sum_probs=61.7
Q ss_pred HHHHHHHHHcCCCeeeccCCCCCCcHHHHH--HHhhccCCCCCEEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHHHhC
Q 030178 40 IALIRHAINSGITFLDTSDIYGPHTNEILL--GKAFKGGFRERAELATKFGIGIVDGKYGYHGDPAYVRAACEASLKRLD 117 (182)
Q Consensus 40 ~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~l--G~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg 117 (182)
.+.++..-..+..+|+.++.-+....+..+ ...+++ ..+-....+... +.++..++..+.... .+|
T Consensus 32 ~~~~~~L~~~~pd~vsVT~~~~g~~r~~t~~~a~~i~~---~g~~~i~Hltc~--------~~~~~~l~~~L~~~~-~~G 99 (310)
T 3apt_A 32 FRTLEELKAFRPAFVSITYGAMGSTRERSVAWAQRIQS---LGLNPLAHLTVA--------GQSRKEVAEVLHRFV-ESG 99 (310)
T ss_dssp HHHHHHHGGGCCSEEEECCCSTTCSHHHHHHHHHHHHH---TTCCBCEEEECT--------TSCHHHHHHHHHHHH-HTT
T ss_pred HHHHHHHhcCCCCEEEEecCCCCCcchhHHHHHHHHHH---hCCCeEEEeecC--------CCCHHHHHHHHHHHH-HCC
Confidence 344444444578999988644422223333 333332 122222222222 256777777777644 778
Q ss_pred CCccceEEeec-CCCC-C---C----HHHHHHHHHHHhHc-Cc-cccccceeeccchh--------H-HHHHHHhc----
Q 030178 118 VDCIDLYYQHR-IDTQ-T---P----IEVTVISLSLLPSF-VK-LKCSILYCGVVALV--------A-KQMLLLFT---- 173 (182)
Q Consensus 118 ~~~lDl~~lh~-~d~~-~---~----~~~~~~al~~l~~~-G~-ir~~~~~iGvs~~~--------~-~~~~~l~~---- 173 (182)
++.+ +.+.- |... . + +..+.+-++.+++. |- +. ||+..+. . ..++.+.+
T Consensus 100 I~ni--LaLrGD~p~~~g~~~~~~~~f~~a~~Lv~~ir~~~g~~f~-----igvA~yPE~Hp~~~~~~~d~~~Lk~Kv~a 172 (310)
T 3apt_A 100 VENL--LALRGDPPRGERVFRPHPEGFRYAAELVALIRERYGDRVS-----VGGAAYPEGHPESESLEADLRHFKAKVEA 172 (310)
T ss_dssp CCEE--EEECCCCSTTCCSCCCCTTSCSSHHHHHHHHHHHHGGGSE-----EEEEECTTCCTTSSCHHHHHHHHHHHHHH
T ss_pred CCEE--EEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHhCCCCeE-----EEEEeCCCcCCCCCCHHHHHHHHHHHHHc
Confidence 6543 22221 1100 0 1 33455555555554 64 44 9998763 2 24444443
Q ss_pred CCCeeeecC
Q 030178 174 NIDFFIYQL 182 (182)
Q Consensus 174 ~~~~~~~q~ 182 (182)
..+|+.+|.
T Consensus 173 GAdf~iTQ~ 181 (310)
T 3apt_A 173 GLDFAITQL 181 (310)
T ss_dssp HCSEEEECC
T ss_pred CCCEEEecc
Confidence 478888885
No 105
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=30.36 E-value=60 Score=23.86 Aligned_cols=33 Identities=6% Similarity=0.211 Sum_probs=24.8
Q ss_pred cceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccC
Q 030178 18 AQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSD 58 (182)
Q Consensus 18 ~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~ 58 (182)
+||+-++.+.. ....+.++.+-+.|++.++...
T Consensus 11 klg~~~~~~~~--------~~~~~~l~~~~~~G~~~vEl~~ 43 (262)
T 3p6l_A 11 RLGMQSYSFHL--------FPLTEALDKTQELGLKYIEIYP 43 (262)
T ss_dssp EEEEEGGGGTT--------SCHHHHHHHHHHTTCCEEEECT
T ss_pred EEEEEecccCC--------CCHHHHHHHHHHcCCCEEeecC
Confidence 46777776621 2377889999999999999764
No 106
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=29.71 E-value=83 Score=22.29 Aligned_cols=50 Identities=14% Similarity=-0.037 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCccc
Q 030178 102 PAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLK 152 (182)
Q Consensus 102 ~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir 152 (182)
--.+++.+.+-|+..|.+.+|+=. +..++..++.+.-..+.+.+.+|...
T Consensus 14 G~~lK~~i~~~L~~~G~eV~D~G~-~~~~~~~dYpd~a~~va~~V~~g~~d 63 (162)
T 2vvp_A 14 GYELKQRIIEHLKQTGHEPIDCGA-LRYDADDDYPAFCIAAATRTVADPGS 63 (162)
T ss_dssp HHHHHHHHHHHHHHTTCEEEECSC-CSCCTTCCHHHHHHHHHHHHHHSTTC
T ss_pred hHHHHHHHHHHHHHCCCEEEEeCC-CCCCCCCChHHHHHHHHHHHHcCCCc
Confidence 456899999999999998888743 33333557888888888888888764
No 107
>3g13_A Putative conjugative transposon recombinase; resolvase, PSI-II, target 11223F, structural genomics, prote structure initiative; 2.00A {Clostridium difficile}
Probab=28.43 E-value=28 Score=24.27 Aligned_cols=46 Identities=13% Similarity=0.057 Sum_probs=33.7
Q ss_pred HHHHHHHHHHhCCCccceEEeecCCCCC-CHHHHHHHHHHHhHcCcc
Q 030178 106 RAACEASLKRLDVDCIDLYYQHRIDTQT-PIEVTVISLSLLPSFVKL 151 (182)
Q Consensus 106 ~~~~~~sL~~Lg~~~lDl~~lh~~d~~~-~~~~~~~al~~l~~~G~i 151 (182)
+..+.+.|+.+....+|.+++...|... ...+....++.|.+.|.-
T Consensus 61 Rp~l~~ll~~~~~g~id~vvv~~ldRl~R~~~~~~~~~~~l~~~gv~ 107 (169)
T 3g13_A 61 REDFQRMINDCMNGEIDMVFTKSISRFARNTLDTLKYVRMLKERNIA 107 (169)
T ss_dssp SHHHHHHHHHHHTTCCSEEEESCHHHHCSSHHHHHHHHHHHHTTTCE
T ss_pred CHHHHHHHHHHHcCCCcEEEEEeccccccChHHHHHHHHHHHHcCCE
Confidence 4556667777766778999999876643 366788888888888743
No 108
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=28.22 E-value=1.8e+02 Score=21.42 Aligned_cols=101 Identities=10% Similarity=0.069 Sum_probs=58.9
Q ss_pred CCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhccCCCCCEEEEeccCCCcCCCCCCCCCCHHHHHHHHHH
Q 030178 32 PPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKGGFRERAELATKFGIGIVDGKYGYHGDPAYVRAACEA 111 (182)
Q Consensus 32 ~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~ 111 (182)
...+.++..++++.|.+.|..-+-..+.|- +...+.++. .++-+++-.+.... ..+.+.....+++
T Consensus 14 p~~t~~~i~~l~~~a~~~~~~aVcv~p~~v-----~~~~~~l~~---~~v~v~~vigFP~G------~~~~~~k~~e~~~ 79 (220)
T 1ub3_A 14 PTATLEEVAKAAEEALEYGFYGLCIPPSYV-----AWVRARYPH---APFRLVTVVGFPLG------YQEKEVKALEAAL 79 (220)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEECCGGGH-----HHHHHHCTT---CSSEEEEEESTTTC------CSCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEECHHHH-----HHHHHHhCC---CCceEEEEecCCCC------CCchHHHHHHHHH
Confidence 345789999999999999988887665443 223344432 34667666654331 1334444555666
Q ss_pred HHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhH
Q 030178 112 SLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPS 147 (182)
Q Consensus 112 sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~ 147 (182)
.++ +|.+-+|+..--............+.+.++++
T Consensus 80 Ai~-~GAdevd~vinig~~~~g~~~~v~~ei~~v~~ 114 (220)
T 1ub3_A 80 ACA-RGADEVDMVLHLGRAKAGDLDYLEAEVRAVRE 114 (220)
T ss_dssp HHH-TTCSEEEEECCHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHH-cCCCEEEecccchhhhCCCHHHHHHHHHHHHH
Confidence 665 68888997652221111234445555555554
No 109
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=28.02 E-value=84 Score=25.24 Aligned_cols=79 Identities=13% Similarity=0.049 Sum_probs=0.0
Q ss_pred CCCCCChHHHHHHHHHHHHcCCCee---eccCCCCCCcHHHHHHHhhcc-CCCCCEEEEeccCCCcCCCCCCCCCCHHHH
Q 030178 30 YGPPKPEPDMIALIRHAINSGITFL---DTSDIYGPHTNEILLGKAFKG-GFRERAELATKFGIGIVDGKYGYHGDPAYV 105 (182)
Q Consensus 30 ~~~~~~~~~~~~~l~~a~~~G~~~~---Dta~~Yg~g~~e~~lG~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~~~~i 105 (182)
++...+.+...++++.+.++|...| ||...--|....+++....+. ..++++.|....+......
T Consensus 150 d~~r~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~~~l~~H~Hnd~GlA----------- 218 (370)
T 3rmj_A 150 DALRSEIDFLAEICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIAKTPNGGKVVWSAHCHNDLGLA----------- 218 (370)
T ss_dssp TGGGSCHHHHHHHHHHHHHHTCCEEEEECSSSCCCHHHHHHHHHHHHHHSTTGGGSEEEEECBCTTSCH-----------
T ss_pred CCCccCHHHHHHHHHHHHHcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCcCceEEEEEeCCCCChH-----------
Q ss_pred HHHHHHHHHHh--CCCccc
Q 030178 106 RAACEASLKRL--DVDCID 122 (182)
Q Consensus 106 ~~~~~~sL~~L--g~~~lD 122 (182)
+.++|..+ |.+++|
T Consensus 219 ---vAN~laAv~aGa~~vd 234 (370)
T 3rmj_A 219 ---VANSLAALKGGARQVE 234 (370)
T ss_dssp ---HHHHHHHHHTTCCEEE
T ss_pred ---HHHHHHHHHhCCCEEE
No 110
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=27.83 E-value=30 Score=29.07 Aligned_cols=22 Identities=18% Similarity=0.308 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHcCCCeeeccC
Q 030178 37 PDMIALIRHAINSGITFLDTSD 58 (182)
Q Consensus 37 ~~~~~~l~~a~~~G~~~~Dta~ 58 (182)
.+...+++.|+++|++++|||.
T Consensus 94 ~~~l~Im~acleaGv~YlDTa~ 115 (480)
T 2ph5_A 94 ISSLALIILCNQKGALYINAAT 115 (480)
T ss_dssp SCHHHHHHHHHHHTCEEEESSC
T ss_pred ccCHHHHHHHHHcCCCEEECCC
Confidence 3467999999999999999995
No 111
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=27.12 E-value=2e+02 Score=21.62 Aligned_cols=99 Identities=11% Similarity=0.024 Sum_probs=48.4
Q ss_pred ccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCeeeccCCC-CCCcHHHHHHHhh---cc-CCCCCEEEEeccCC
Q 030178 15 EVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFLDTSDIY-GPHTNEILLGKAF---KG-GFRERAELATKFGI 89 (182)
Q Consensus 15 ~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~Dta~~Y-g~g~~e~~lG~~l---~~-~~r~~~~i~tK~~~ 89 (182)
..|+||.-... .+.+++.+.++.+.+.|.+.+.-=-.| .+-.+...+.+.+ +. ...-.+.++.+-..
T Consensus 18 ~~p~Icv~l~~--------~~~~e~~~~~~~~~~~~~D~vElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~ 89 (257)
T 2yr1_A 18 TEPCICAPVVG--------EDDRKVLREAEEVCRKQPDLLEWRADFFRAIDDQERVLATANGLRNIAGEIPILFTIRSER 89 (257)
T ss_dssp SSCEEEEEECC--------SSHHHHHHHHHHHHHSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHSSSCCEEEECCCTT
T ss_pred CCcEEEEEecC--------CCHHHHHHHHHHHhhcCCCEEEEEeecccccCcHHHHHHHHHHHHHhccCCCEEEEEeecc
Confidence 44556655532 256777788888899999877532222 2111122233333 22 11223444433221
Q ss_pred CcCCCCCCCCCCHHHHHHHHHHHHHHhC-CCccceEE
Q 030178 90 GIVDGKYGYHGDPAYVRAACEASLKRLD-VDCIDLYY 125 (182)
Q Consensus 90 ~~~~~~~~~~~~~~~i~~~~~~sL~~Lg-~~~lDl~~ 125 (182)
. +...+..+.+.-.+-++..+ ++| ++|+|+=+
T Consensus 90 e---GG~~~~~~~~~~~~ll~~~~-~~g~~d~iDvEl 122 (257)
T 2yr1_A 90 E---GGQPIPLNEAEVRRLIEAIC-RSGAIDLVDYEL 122 (257)
T ss_dssp T---TCCCCSSCHHHHHHHHHHHH-HHTCCSEEEEEG
T ss_pred c---CCCCCCCCHHHHHHHHHHHH-HcCCCCEEEEEC
Confidence 1 11111345555555555554 456 89999644
No 112
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=26.24 E-value=1.2e+02 Score=24.08 Aligned_cols=20 Identities=10% Similarity=0.124 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHcCCCeeecc
Q 030178 38 DMIALIRHAINSGITFLDTS 57 (182)
Q Consensus 38 ~~~~~l~~a~~~G~~~~Dta 57 (182)
...+.++.+-+.|+..|+..
T Consensus 34 ~~~e~l~~aa~~G~~~vEl~ 53 (387)
T 1bxb_A 34 DPVYVVHKLAELGAYGVNLH 53 (387)
T ss_dssp CHHHHHHHHHHHTCSEEEEE
T ss_pred CHHHHHHHHHHhCCCEEEec
Confidence 46678888889999999976
No 113
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=26.21 E-value=2.5e+02 Score=22.39 Aligned_cols=108 Identities=19% Similarity=0.147 Sum_probs=62.3
Q ss_pred CChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHh-h----------------cc--CCCCCEEEEeccCCCcCCC
Q 030178 34 KPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKA-F----------------KG--GFRERAELATKFGIGIVDG 94 (182)
Q Consensus 34 ~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~-l----------------~~--~~r~~~~i~tK~~~~~~~~ 94 (182)
.+.+....+.+++-+.|+.+|-|.-.-. +-.++-+. . +. .....+.|+|=.
T Consensus 88 l~~e~~~~L~~~~~~~Gi~~~st~~d~~---svd~l~~~~v~~~KI~S~~~~n~~LL~~va~~gkPviLstGm------- 157 (349)
T 2wqp_A 88 LNEEDEIKLKEYVESKGMIFISTLFSRA---AALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILSTGM------- 157 (349)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECSHH---HHHHHHHHTCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTT-------
T ss_pred CCHHHHHHHHHHHHHhCCeEEEeeCCHH---HHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECCC-------
Confidence 3667788888888899999886553222 11222221 0 00 012223333222
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCCCC-CCHHH-HHHHHHHHhHcC-ccccccceeeccchhH
Q 030178 95 KYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQ-TPIEV-TVISLSLLPSFV-KLKCSILYCGVVALVA 165 (182)
Q Consensus 95 ~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~-~~~~~-~~~al~~l~~~G-~ir~~~~~iGvs~~~~ 165 (182)
.+.+.+..+++-.... |. ++.++|..... .+.++ -+.++..|++.= -+- ||.|+|+.
T Consensus 158 -----at~~Ei~~Ave~i~~~-G~---~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f~~lp-----Vg~sdHt~ 217 (349)
T 2wqp_A 158 -----NSIESIKKSVEIIREA-GV---PYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAI-----IGLSDHTL 217 (349)
T ss_dssp -----CCHHHHHHHHHHHHHH-TC---CEEEEECCCCSSCCGGGCCTHHHHHHHHHCTTSE-----EEEECCSS
T ss_pred -----CCHHHHHHHHHHHHHc-CC---CEEEEeccCCCCCChhhcCHHHHHHHHHHCCCCC-----EEeCCCCC
Confidence 3578899888876654 43 89999976432 23332 256677776663 344 89998873
No 114
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=26.13 E-value=2.4e+02 Score=22.22 Aligned_cols=120 Identities=5% Similarity=-0.105 Sum_probs=64.4
Q ss_pred ChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhccCCCCCEEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHH
Q 030178 35 PEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKGGFRERAELATKFGIGIVDGKYGYHGDPAYVRAACEASLK 114 (182)
Q Consensus 35 ~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~ 114 (182)
+.++..+..+.+.+.|++.|..--........+.+ +++++.-.+++-|..+... ..+.+...+-+ +.|+
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~e~v-~avr~a~g~d~~l~vDan~---------~~~~~~a~~~~-~~l~ 213 (379)
T 2rdx_A 145 SEAETRAELARHRAAGYRQFQIKVGADWQSDIDRI-RACLPLLEPGEKAMADANQ---------GWRVDNAIRLA-RATR 213 (379)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHH-HHHGGGSCTTCEEEEECTT---------CSCHHHHHHHH-HHTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccCCHHHHHHHH-HHHHHhcCCCCEEEEECCC---------CCCHHHHHHHH-HHHH
Confidence 45667788888999999999853211111122333 4455522234555544321 14454443322 2244
Q ss_pred HhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCccccccceeeccchhHHHHHHHhc--CCCeeee
Q 030178 115 RLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSILYCGVVALVAKQMLLLFT--NIDFFIY 180 (182)
Q Consensus 115 ~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~~iGvs~~~~~~~~~l~~--~~~~~~~ 180 (182)
.++ + ++..|-+ .++.+.++++.-.+.- ..+=+-++.+.++++++ .+|++.+
T Consensus 214 ~~~-----i-~iE~P~~------~~~~~~~l~~~~~iPI---~~de~i~~~~~~~~~i~~~~~d~v~i 266 (379)
T 2rdx_A 214 DLD-----Y-ILEQPCR------SYEECQQVRRVADQPM---KLDECVTGLHMAQRIVADRGAEICCL 266 (379)
T ss_dssp TSC-----C-EEECCSS------SHHHHHHHHTTCCSCE---EECTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred hCC-----e-EEeCCcC------CHHHHHHHHhhCCCCE---EEeCCcCCHHHHHHHHHcCCCCEEEE
Confidence 443 4 4555532 4777777777654442 13334567888888765 4677654
No 115
>2b0l_A GTP-sensing transcriptional pleiotropic repressor; CODY, DNA-binding, nucleotide-binding, transcript regulation, winged HTH motif.; 2.90A {Bacillus subtilis} SCOP: a.4.5.66
Probab=25.80 E-value=59 Score=20.80 Aligned_cols=38 Identities=21% Similarity=0.031 Sum_probs=25.2
Q ss_pred HHHHHHHHHHhHcCcccccc---ceeeccchhHHHHHHHhc
Q 030178 136 EVTVISLSLLPSFVKLKCSI---LYCGVVALVAKQMLLLFT 173 (182)
Q Consensus 136 ~~~~~al~~l~~~G~ir~~~---~~iGvs~~~~~~~~~l~~ 173 (182)
.-+.++|..|.++|+|...- .-+=|+..+.+.+.++++
T Consensus 58 ~tVr~al~~L~~~GlI~~~~gG~~G~~V~~~~~~~~~~~~~ 98 (102)
T 2b0l_A 58 SVIVNALRKLESAGVIESRSLGMKGTYIKVLNNKFLIELEN 98 (102)
T ss_dssp HHHHHHHHHHHHTTSEEEEECSSSCEEEEECCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEeCCCCcEEEecCCHHHHHHHHH
Confidence 35678999999999997410 001155677777777763
No 116
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=25.69 E-value=1.2e+02 Score=21.29 Aligned_cols=45 Identities=9% Similarity=-0.064 Sum_probs=33.6
Q ss_pred ccceEEeecCCCCCCHHHHHHHHHHHhHcCccccccceeeccchhHHHHHHH
Q 030178 120 CIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSILYCGVVALVAKQMLLL 171 (182)
Q Consensus 120 ~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~~iGvs~~~~~~~~~l 171 (182)
.=|++++=..... ..++.++++.+++.|.-- |++++.....+.+.
T Consensus 113 ~~DvvI~iS~SG~--t~~~i~~~~~ak~~g~~v-----I~IT~~~~s~La~~ 157 (199)
T 1x92_A 113 PGDVLLAISTSGN--SANVIQAIQAAHDREMLV-----VALTGRDGGGMASL 157 (199)
T ss_dssp TTCEEEEECSSSC--CHHHHHHHHHHHHTTCEE-----EEEECTTCHHHHHH
T ss_pred CCCEEEEEeCCCC--CHHHHHHHHHHHHCCCEE-----EEEECCCCCcHHhc
Confidence 4566665554333 347899999999999765 99999888888777
No 117
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=25.24 E-value=2.6e+02 Score=22.32 Aligned_cols=132 Identities=10% Similarity=-0.002 Sum_probs=66.6
Q ss_pred CChHHHH--------HHHHHHH-HcCCCeeec--------------------cCCCCCCcHH---HHHHH---hhcc-CC
Q 030178 34 KPEPDMI--------ALIRHAI-NSGITFLDT--------------------SDIYGPHTNE---ILLGK---AFKG-GF 77 (182)
Q Consensus 34 ~~~~~~~--------~~l~~a~-~~G~~~~Dt--------------------a~~Yg~g~~e---~~lG~---~l~~-~~ 77 (182)
.+.++.. +..+.|. ++|++.++. .+.||.-.-| +++-+ ++++ .+
T Consensus 163 lt~~eI~~~~i~~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg 242 (379)
T 3aty_A 163 LTDDEVRDGIIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVG 242 (379)
T ss_dssp CCHHHHHHTHHHHHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcC
Confidence 4556665 4456677 899998873 4456620212 12222 2233 23
Q ss_pred CCCEEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEEeecCC---CCCCHHHHHHHHHHHhHcCccccc
Q 030178 78 RERAELATKFGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYYQHRID---TQTPIEVTVISLSLLPSFVKLKCS 154 (182)
Q Consensus 78 r~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d---~~~~~~~~~~al~~l~~~G~ir~~ 154 (182)
.+ .|..|+.+...-.......+.+.. ..+-+.|+..|++++++ |... +..+. + +.++++.=.+-
T Consensus 243 ~~--~v~vRis~~~~~~~~~~~~~~~~~-~~la~~l~~~Gvd~i~v---~~~~~~~~~~~~----~-~~~ir~~~~iP-- 309 (379)
T 3aty_A 243 SD--RVGLRISPLNGVHGMIDSNPEALT-KHLCKKIEPLSLAYLHY---LRGDMVNQQIGD----V-VAWVRGSYSGV-- 309 (379)
T ss_dssp GG--GEEEEECTTCCGGGCCCSCHHHHH-HHHHHHHGGGCCSEEEE---ECSCTTSCCCCC----H-HHHHHTTCCSC--
T ss_pred CC--eEEEEECcccccccCCCCCCHHHH-HHHHHHHHHhCCCEEEE---cCCCcCCCCccH----H-HHHHHHHCCCc--
Confidence 33 377787653210000001223332 34556677888766665 4421 11121 3 44444443333
Q ss_pred cceeeccchhHHHHHHHhcC--CCeeee
Q 030178 155 ILYCGVVALVAKQMLLLFTN--IDFFIY 180 (182)
Q Consensus 155 ~~~iGvs~~~~~~~~~l~~~--~~~~~~ 180 (182)
.|+...++++..+++++. +|++.+
T Consensus 310 --vi~~G~it~~~a~~~l~~g~aD~V~i 335 (379)
T 3aty_A 310 --KISNLRYDFEEADQQIREGKVDAVAF 335 (379)
T ss_dssp --EEEESSCCHHHHHHHHHTTSCSEEEE
T ss_pred --EEEECCCCHHHHHHHHHcCCCeEEEe
Confidence 266666788888888873 677653
No 118
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=24.86 E-value=56 Score=25.94 Aligned_cols=38 Identities=8% Similarity=-0.005 Sum_probs=30.5
Q ss_pred cccCcceeccccCCCCCCCCCChHHHHHHHHHH-----HHcCCCee
Q 030178 14 LEVSAQGLGCMGMSALYGPPKPEPDMIALIRHA-----INSGITFL 54 (182)
Q Consensus 14 ~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a-----~~~G~~~~ 54 (182)
.+.|++|..+|-. +....+++...+.++.+ -++|+.+|
T Consensus 6 ~~~pp~gwnsW~~---~~~~~~e~~i~~~ad~~~~~gl~~~G~~~v 48 (362)
T 1uas_A 6 GRTPQMGWNSWNH---FYCGINEQIIRETADALVNTGLAKLGYQYV 48 (362)
T ss_dssp CSSCCEEEESHHH---HTTCCCHHHHHHHHHHHHHTSHHHHTCCEE
T ss_pred CCCCCEEEECHHH---HCCCCCHHHHHHHHHHHHHcCchhcCCcEE
Confidence 4678999999953 45567899999999999 67788876
No 119
>1nzj_A Hypothetical protein YADB; Zn cluster, glutamyl T-RNA synthetase, structural genomics, unknown function; 1.50A {Escherichia coli} SCOP: c.26.1.1 PDB: 2zlz_A* 4a91_A*
Probab=24.81 E-value=1.8e+02 Score=22.55 Aligned_cols=57 Identities=7% Similarity=-0.080 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCccccccceeeccchhHHHHHH
Q 030178 103 AYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSILYCGVVALVAKQMLL 170 (182)
Q Consensus 103 ~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~~iGvs~~~~~~~~~ 170 (182)
+...+++.+.|+.||+++-.-.... ...+....+++++|+++|++ | .|..+.+++++
T Consensus 54 ~~~~~~I~~dL~~LGl~~D~~~~~q----Ser~~~y~~~~~~L~~~G~a-----Y--~c~ct~~~l~~ 110 (298)
T 1nzj_A 54 PGAAETILRQLEHYGLHWDGDVLWQ----SQRHDAYREALAWLHEQGLS-----Y--YCTCTRARIQS 110 (298)
T ss_dssp TTHHHHHHHHHHHTTCCCSSCCEEG----GGCHHHHHHHHHHHHHTTCE-----E--EECCCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCCCCCeee----eCCHHHHHHHHHHHHHcCCc-----c--cCcCCHHHHHH
Confidence 3467888899999998644321111 12366778999999999999 3 35556666655
No 120
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=24.62 E-value=1.4e+02 Score=23.15 Aligned_cols=101 Identities=20% Similarity=0.109 Sum_probs=54.5
Q ss_pred CCCCCChHHHHHHHHHHHHcCCCee---eccCCCCCCcHHHHHHHhhccCCCCCEEEEeccCCCcCCCCCCCCCCHHHHH
Q 030178 30 YGPPKPEPDMIALIRHAINSGITFL---DTSDIYGPHTNEILLGKAFKGGFRERAELATKFGIGIVDGKYGYHGDPAYVR 106 (182)
Q Consensus 30 ~~~~~~~~~~~~~l~~a~~~G~~~~---Dta~~Yg~g~~e~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~i~ 106 (182)
+....+.+...++++.+.+.|...| ||...-.|....+++....+..| ++.|......... .......
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~--~~~l~~H~Hnd~G-------la~AN~l 220 (307)
T 1ydo_A 150 YEKDVPIEQVIRLSEALFEFGISELSLGDTIGAANPAQVETVLEALLARFP--ANQIALHFHDTRG-------TALANMV 220 (307)
T ss_dssp TTBCCCHHHHHHHHHHHHHHTCSCEEEECSSCCCCHHHHHHHHHHHHTTSC--GGGEEEECBGGGS-------CHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCcCHHHHHHHHHHHHHhCC--CCeEEEEECCCCc-------hHHHHHH
Confidence 4445678899999999999998766 55543333334454544433333 2334444433321 2222233
Q ss_pred HHHHHHHHHhCCCccceEEeec---C-----CCCCCHHHHHHHHHH
Q 030178 107 AACEASLKRLDVDCIDLYYQHR---I-----DTQTPIEVTVISLSL 144 (182)
Q Consensus 107 ~~~~~sL~~Lg~~~lDl~~lh~---~-----d~~~~~~~~~~al~~ 144 (182)
.+++ .|++++|.-+.-. | .-..+.++.+..|+.
T Consensus 221 aAv~-----aGa~~vd~tv~GlGecp~a~graGN~~~E~lv~~L~~ 261 (307)
T 1ydo_A 221 TALQ-----MGITVFDGSAGGLGGCPYAPGSSGNAATEDIVYMLEQ 261 (307)
T ss_dssp HHHH-----HTCCEEEEBGGGCCEETTEEEEECBCBHHHHHHHHHH
T ss_pred HHHH-----hCCCEEEEcccccCCCCCCCCCCCChhHHHHHHHHHh
Confidence 3332 3778888654411 1 123457777777765
No 121
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=24.52 E-value=1.7e+02 Score=21.37 Aligned_cols=27 Identities=22% Similarity=0.413 Sum_probs=23.0
Q ss_pred ChHHHHHHHHHHHHcCCCeeeccCCCC
Q 030178 35 PEPDMIALIRHAINSGITFLDTSDIYG 61 (182)
Q Consensus 35 ~~~~~~~~l~~a~~~G~~~~Dta~~Yg 61 (182)
+.++..++.+.+.++|..++.|+..+.
T Consensus 130 ~~~~~~~~a~~a~eaGad~I~tstg~~ 156 (225)
T 1mzh_A 130 NEEEIKKAVEICIEAGADFIKTSTGFA 156 (225)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECCCSCS
T ss_pred CHHHHHHHHHHHHHhCCCEEEECCCCC
Confidence 567789999999999999999887553
No 122
>3gip_A N-acyl-D-glutamate deacylase; amidohydrolase family, hydrolase; 1.50A {Bordetella bronchiseptica} PDB: 3giq_A*
Probab=24.49 E-value=1.2e+02 Score=24.87 Aligned_cols=102 Identities=14% Similarity=0.063 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHcCCCeeeccCCCCCCc---HHHHHHHhhccCCCCCEEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHH
Q 030178 37 PDMIALIRHAINSGITFLDTSDIYGPHT---NEILLGKAFKGGFRERAELATKFGIGIVDGKYGYHGDPAYVRAACEASL 113 (182)
Q Consensus 37 ~~~~~~l~~a~~~G~~~~Dta~~Yg~g~---~e~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL 113 (182)
++..++++.+++.|..-|-+...|.++. .++++.. ++...+.+..+++..-... ....+.+.+.++-.
T Consensus 167 ~~m~~l~~~~~~~Ga~g~~~~~~y~p~~~~~~~el~~~-~~~a~~~g~~v~~H~~~~~-------~~~~~a~~e~i~la- 237 (480)
T 3gip_A 167 QAMQDMLQAALEAGAVGFSTGLAYQPGAVAQAAELEGL-ARVAAERRRLHTSHIRNEA-------DGVEAAVEEVLAIG- 237 (480)
T ss_dssp HHHHHHHHHHHHHTCCEEEEETTSTTGGGCCHHHHHHH-HHHHHHTTCEEEEECSCSS-------TTHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHCCCcEEeecCccCCcccCCHHHHHHH-HHHHHHcCCEEEEEecCcc-------ccHHHHHHHHHHHH-
Confidence 4456677788899999998887786542 3443332 2332223344555443211 11133344433322
Q ss_pred HHhCCCccceEEeecCCC----CCCHHHHHHHHHHHhHcCc
Q 030178 114 KRLDVDCIDLYYQHRIDT----QTPIEVTVISLSLLPSFVK 150 (182)
Q Consensus 114 ~~Lg~~~lDl~~lh~~d~----~~~~~~~~~al~~l~~~G~ 150 (182)
+..| ..+...|--.. .....+.++.+++.+++|.
T Consensus 238 ~~~g---~~v~i~H~s~~~~~~~~~~~~~l~~i~~a~~~G~ 275 (480)
T 3gip_A 238 RGTG---CATVVSHHKCMMPQNWGRSRATLANIDRAREQGV 275 (480)
T ss_dssp HHHC---CEEEETTCCCCSGGGTTTHHHHHHHHHHHHHTTC
T ss_pred HHhC---CCEEEEEEeccCccchhhHHHHHHHHHHHHHcCC
Confidence 3334 33444454211 1125788999999999985
No 123
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=24.42 E-value=2.5e+02 Score=21.86 Aligned_cols=26 Identities=8% Similarity=0.120 Sum_probs=21.6
Q ss_pred CCChHHHHHHHHHHHHcCCCeeeccC
Q 030178 33 PKPEPDMIALIRHAINSGITFLDTSD 58 (182)
Q Consensus 33 ~~~~~~~~~~l~~a~~~G~~~~Dta~ 58 (182)
..+.++..++++...+.|+..|+...
T Consensus 24 ~~~~~~Kl~ia~~L~~~Gv~~IE~g~ 49 (325)
T 3eeg_A 24 QLNTEEKIIVAKALDELGVDVIEAGF 49 (325)
T ss_dssp -CCTTHHHHHHHHHHHHTCSEEEEEC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 34667888999999999999999874
No 124
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A*
Probab=24.42 E-value=99 Score=27.25 Aligned_cols=38 Identities=8% Similarity=-0.009 Sum_probs=31.2
Q ss_pred cccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCCCee
Q 030178 14 LEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGITFL 54 (182)
Q Consensus 14 ~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~~ 54 (182)
-+.+++++.+|-. +....+++...++++.|.+.|+.+|
T Consensus 326 ~~~rPv~~NsW~a---~~~d~~e~~i~~~ad~aa~lG~e~f 363 (729)
T 4fnq_A 326 DRERPILINNWEA---TYFDFNEEKLVNIAKTEAELGIELF 363 (729)
T ss_dssp TSCCCCEEECSTT---TTTCCCHHHHHHHHHHHHHHTCCEE
T ss_pred ccCceeEEccccc---ccccCCHHHHHHHHHHHHhcCccEE
Confidence 3556889999843 4556799999999999999999977
No 125
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=24.34 E-value=95 Score=24.75 Aligned_cols=20 Identities=10% Similarity=0.081 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHcCCCeeecc
Q 030178 38 DMIALIRHAINSGITFLDTS 57 (182)
Q Consensus 38 ~~~~~l~~a~~~G~~~~Dta 57 (182)
...+.++.+-+.|+..|+..
T Consensus 34 ~~~e~l~~aa~~G~~~VEl~ 53 (393)
T 1xim_A 34 DPVEAVHKLAEIGAYGITFH 53 (393)
T ss_dssp CHHHHHHHHHHHTCSEEECB
T ss_pred CHHHHHHHHHHhCCCEEEee
Confidence 46678888889999999976
No 126
>1mli_A Muconolactone isomerase; intramolecular oxidoreductase; 3.30A {Pseudomonas putida} SCOP: d.58.4.1
Probab=24.15 E-value=66 Score=20.73 Aligned_cols=40 Identities=8% Similarity=-0.032 Sum_probs=27.5
Q ss_pred HHHHHHHhHcCccccccceeec----cch---hHHHHHHHhcCCCee
Q 030178 139 VISLSLLPSFVKLKCSILYCGV----VAL---VAKQMLLLFTNIDFF 178 (182)
Q Consensus 139 ~~al~~l~~~G~ir~~~~~iGv----s~~---~~~~~~~l~~~~~~~ 178 (182)
.+.-.+|.++|+++.+|+-.|= |-| +.+++.+++..++++
T Consensus 28 ka~a~eLq~~G~~~~lWRv~G~y~nisIfdv~s~~eLh~iL~~LPLf 74 (96)
T 1mli_A 28 KELAQRLQREGTWRHLWRIAGHYANYSVFDVPSVEALHDTLMQLPLF 74 (96)
T ss_pred HHHHHHHHhCCeeEEEEEecCCccEEEEEEcCCHHHHHHHHHhCCCC
Confidence 4567789999999887766554 222 367788888765443
No 127
>1r7l_A Phage protein; structural genomics, two layers alpha-beta sandwich, PSI, protein structure initiative, midwest center for structural genomics; 2.00A {Bacillus cereus} SCOP: d.277.1.1
Probab=24.07 E-value=32 Score=22.58 Aligned_cols=23 Identities=22% Similarity=0.011 Sum_probs=19.8
Q ss_pred CCCCCHHHHHHHHHHHhHcCccc
Q 030178 130 DTQTPIEVTVISLSLLPSFVKLK 152 (182)
Q Consensus 130 d~~~~~~~~~~al~~l~~~G~ir 152 (182)
-+.+.+.++|..+|+|+++|++-
T Consensus 44 k~S~ni~~AW~VVEKlr~~~~~~ 66 (110)
T 1r7l_A 44 LYSQNIESAWQVVEKLEYDVKVT 66 (110)
T ss_dssp CTTTCHHHHHHHHHHSSSEEEEE
T ss_pred CCCccHHHHHHHHHHHHhhceEE
Confidence 35677999999999999999883
No 128
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=23.77 E-value=1e+02 Score=23.53 Aligned_cols=68 Identities=9% Similarity=-0.164 Sum_probs=34.2
Q ss_pred CCHHHHHHHHHHHHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCccccccceeeccchhHHHHHHHhc
Q 030178 100 GDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSILYCGVVALVAKQMLLLFT 173 (182)
Q Consensus 100 ~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~~iGvs~~~~~~~~~l~~ 173 (182)
.+.+.. ..+-+.|.++|+++|.+-....+.....+++.++.++.+.+...++- ..+. -+.+.++++.+
T Consensus 23 ~~~e~k-~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~~~~~v----~~l~-~n~~~i~~a~~ 90 (295)
T 1ydn_A 23 VPTADK-IALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRADGVRY----SVLV-PNMKGYEAAAA 90 (295)
T ss_dssp CCHHHH-HHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCSSSEE----EEEC-SSHHHHHHHHH
T ss_pred cCHHHH-HHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhCCCCEE----EEEe-CCHHHHHHHHH
Confidence 344443 33455567777777777654433211113355666666655534441 2333 34556655554
No 129
>3aii_A Glutamyl-tRNA synthetase; amino-acyl tRNA synthetase, ligase; 1.65A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=23.75 E-value=1.9e+02 Score=24.75 Aligned_cols=56 Identities=14% Similarity=-0.002 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCccccccceeeccchhHHHHHH
Q 030178 103 AYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSILYCGVVALVAKQMLL 170 (182)
Q Consensus 103 ~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~~iGvs~~~~~~~~~ 170 (182)
....+++.+.|+.||+++ |-.... ...+....+++++|+++|+. |. |..+.+++.+
T Consensus 145 ~e~~~~I~edL~wLGl~w-d~~~~q----Sdr~~~y~~~~~~Li~~G~A-----Y~--c~cs~eei~~ 200 (553)
T 3aii_A 145 PEAYDMIPADLEWLGVEW-DETVIQ----SDRMETYYEYTEKLIERGGA-----YV--CTCRPEEFRE 200 (553)
T ss_dssp TTHHHHHHHHHHHHTCCC-SEEEEG----GGGHHHHHHHHHHHHHTTSE-----EE--ECSCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCC-CCCccc----ccCHHHHHHHHHHHHHcCCc-----ee--CCCCHHHHHH
Confidence 346677888999999987 642211 23477888999999999998 43 4555555543
No 130
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=23.58 E-value=86 Score=23.68 Aligned_cols=19 Identities=16% Similarity=0.106 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHcCCCeeec
Q 030178 38 DMIALIRHAINSGITFLDT 56 (182)
Q Consensus 38 ~~~~~l~~a~~~G~~~~Dt 56 (182)
...+.++.+.+.|++.|+.
T Consensus 19 ~~~~~l~~~~~~G~~~vEl 37 (303)
T 3aal_A 19 MLLAASEEAASYGANTFMI 37 (303)
T ss_dssp THHHHHHHHHHTTCSEEEE
T ss_pred cHHHHHHHHHHcCCCEEEE
Confidence 4678899999999999987
No 131
>2i7g_A Monooxygenase, AGR_C_4197P; alpha-beta, TIM barrel, helix-bundle, structural genomics, P protein structure initiative; HET: MSE; 1.73A {Agrobacterium tumefaciens str}
Probab=23.35 E-value=2.3e+02 Score=22.31 Aligned_cols=44 Identities=14% Similarity=0.154 Sum_probs=27.8
Q ss_pred CCHHHHHHHHHHHHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHh
Q 030178 100 GDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLP 146 (182)
Q Consensus 100 ~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~ 146 (182)
.+++.|.+.+++..+.+|++. ++++.+....+.++..+.|+.+-
T Consensus 309 Gtpe~va~~l~~~~~~~G~d~---~~l~~~~~~~~~~~~~~~l~~~a 352 (376)
T 2i7g_A 309 GEPELVAEKIIKAHGVFKNDR---FLLQMAIGLMPHDQIMRGIELYG 352 (376)
T ss_dssp ESHHHHHHHHHHHHHHHCCSE---EEEECCCTTCCHHHHHHHHHHHH
T ss_pred eCHHHHHHHHHHHHHhcCCCe---EEEEeCCCCCCHHHHHHHHHHHH
Confidence 478888888888888888654 44454433345555555555543
No 132
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=23.32 E-value=2.2e+02 Score=20.66 Aligned_cols=37 Identities=8% Similarity=-0.047 Sum_probs=23.9
Q ss_pred HHHHHHHHHHcCCCeeeccCCCC-----CCcHHHHHHHhhcc
Q 030178 39 MIALIRHAINSGITFLDTSDIYG-----PHTNEILLGKAFKG 75 (182)
Q Consensus 39 ~~~~l~~a~~~G~~~~Dta~~Yg-----~g~~e~~lG~~l~~ 75 (182)
..+.++.+-+.|++.++....+. ++..-+.+.+.+++
T Consensus 21 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~ 62 (272)
T 2q02_A 21 IEAFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEK 62 (272)
T ss_dssp HHHHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHH
Confidence 56788888999999998764221 12233446666655
No 133
>1li5_A Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys; cysteine, E.coli, ligase; 2.30A {Escherichia coli} SCOP: a.27.1.1 c.26.1.1 PDB: 1li7_A 1u0b_B
Probab=23.23 E-value=1.1e+02 Score=25.20 Aligned_cols=47 Identities=11% Similarity=-0.060 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCccc
Q 030178 102 PAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLK 152 (182)
Q Consensus 102 ~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir 152 (182)
.+...+.+.+.+++||+.+.|.+ +-......++.+.+++|+++|.+-
T Consensus 89 ~~~~~~~f~~~~~~LgI~~~d~~----~r~t~~~~~~~~~i~~L~~~G~aY 135 (461)
T 1li5_A 89 VDRMIAEMHKDFDALNILRPDME----PRATHHIAEIIELTEQLIAKGHAY 135 (461)
T ss_dssp HHHHHHHHHHHHHHTTCCCCSBC----CBGGGCHHHHHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHHHHHHcCCCCCccc----ccccchHHHHHHHHHHHHHCCCEE
Confidence 45677889999999999877753 222234677888899999999873
No 134
>1o1x_A Ribose-5-phosphate isomerase RPIB; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=23.00 E-value=2e+02 Score=20.18 Aligned_cols=51 Identities=4% Similarity=-0.158 Sum_probs=39.3
Q ss_pred CCHHHHHHHHHHHHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCccc
Q 030178 100 GDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLK 152 (182)
Q Consensus 100 ~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir 152 (182)
..--.+++.+.+-|+..|.+.+|+=. +. +...++.+.-..+.+.+.+|...
T Consensus 21 haG~~lK~~i~~~L~~~G~eV~D~G~-~~-~~~~dYpd~a~~va~~V~~g~~d 71 (155)
T 1o1x_A 21 HAAFELKEKVKNYLLGKGIEVEDHGT-YS-EESVDYPDYAKKVVQSILSNEAD 71 (155)
T ss_dssp STTHHHHHHHHHHHHHTTCEEEECCC-CS-SSCCCHHHHHHHHHHHHHTTSCS
T ss_pred chHHHHHHHHHHHHHHCCCEEEEeCC-CC-CCCCChHHHHHHHHHHHHcCCCc
Confidence 34567999999999999999888743 22 33456888888888888888764
No 135
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=22.82 E-value=2.9e+02 Score=21.98 Aligned_cols=123 Identities=13% Similarity=0.059 Sum_probs=69.0
Q ss_pred ChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhccCCCCCEEEE-eccCCCcCCCCCCCCCCHHHHHHHHHHHH
Q 030178 35 PEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKGGFRERAELA-TKFGIGIVDGKYGYHGDPAYVRAACEASL 113 (182)
Q Consensus 35 ~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~~~r~~~~i~-tK~~~~~~~~~~~~~~~~~~i~~~~~~sL 113 (182)
+.++..+..+.+++.|++.|..--...+ ..+...=+++|+.-.+++-|. ..... ..+.+...+ +-+.|
T Consensus 142 ~~e~~~~~a~~~~~~G~~~~KiKvG~~~-~~d~~~v~avR~a~g~~~~l~~vDan~---------~~~~~~A~~-~~~~l 210 (391)
T 3gd6_A 142 EVESNLDVVRQKLEQGFDVFRLYVGKNL-DADEEFLSRVKEEFGSRVRIKSYDFSH---------LLNWKDAHR-AIKRL 210 (391)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECSSCH-HHHHHHHHHHHHHHGGGCEEEEEECTT---------CSCHHHHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeeCCCH-HHHHHHHHHHHHHcCCCCcEEEecCCC---------CcCHHHHHH-HHHHH
Confidence 4577788888899999999975432221 122222244444211233333 22211 134443332 23344
Q ss_pred HHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCccccccceeeccchhHHHHHHHhc--CCCeeee
Q 030178 114 KRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSILYCGVVALVAKQMLLLFT--NIDFFIY 180 (182)
Q Consensus 114 ~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~~iGvs~~~~~~~~~l~~--~~~~~~~ 180 (182)
+.+++ ++.++.-|-+.. .++.+.++++.-.+. ||=+-++.++++++++ .++++++
T Consensus 211 ~~~~i---~~~~iEqP~~~~----d~~~~~~l~~~~~iP-----IdE~~~~~~~~~~~~~~~~~d~v~~ 267 (391)
T 3gd6_A 211 TKYDL---GLEMIESPAPRN----DFDGLYQLRLKTDYP-----ISEHVWSFKQQQEMIKKDAIDIFNI 267 (391)
T ss_dssp TTCCS---SCCEEECCSCTT----CHHHHHHHHHHCSSC-----EEEECCCHHHHHHHHHHTCCSEEEE
T ss_pred HhcCC---CcceecCCCChh----hHHHHHHHHHHcCCC-----cCCCCCCHHHHHHHHHcCCCCEEEE
Confidence 44443 335666664432 367778887766665 6778888999988874 5677654
No 136
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=22.74 E-value=2.3e+02 Score=20.81 Aligned_cols=71 Identities=14% Similarity=0.068 Sum_probs=40.1
Q ss_pred ChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhccCCCCCEEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHH
Q 030178 35 PEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKGGFRERAELATKFGIGIVDGKYGYHGDPAYVRAACEASLK 114 (182)
Q Consensus 35 ~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~ 114 (182)
+++...-++++|-+.||+.+=.|+..| ..-..+-+.+ .+++++.|.-.-...++.+ .+.+..++.|+
T Consensus 36 T~~tl~la~era~e~~Ik~iVVASssG--~TA~k~~e~~----~~~lVvVTh~~GF~~pg~~-------e~~~e~~~~L~ 102 (206)
T 1t57_A 36 TERVLELVGERADQLGIRNFVVASVSG--ETALRLSEMV----EGNIVSVTHHAGFREKGQL-------ELEDEARDALL 102 (206)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEECSSS--HHHHHHHTTC----CSEEEEECCCTTSSSTTCC-------SSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEeCCC--HHHHHHHHHc----cCCEEEEeCcCCCCCCCCC-------cCCHHHHHHHH
Confidence 455566677777788999999888888 3222222233 2277777765433322221 22344455566
Q ss_pred HhCC
Q 030178 115 RLDV 118 (182)
Q Consensus 115 ~Lg~ 118 (182)
+.|+
T Consensus 103 ~~G~ 106 (206)
T 1t57_A 103 ERGV 106 (206)
T ss_dssp HHTC
T ss_pred hCCC
Confidence 6664
No 137
>3i71_A Ethanolamine utilization protein EUTK; helix-turn-helix, unknown function; HET: FLC; 2.10A {Escherichia coli}
Probab=22.73 E-value=81 Score=18.37 Aligned_cols=21 Identities=29% Similarity=0.147 Sum_probs=18.4
Q ss_pred CCHHHHHHHHHHHhHcCcccc
Q 030178 133 TPIEVTVISLSLLPSFVKLKC 153 (182)
Q Consensus 133 ~~~~~~~~al~~l~~~G~ir~ 153 (182)
.+++.+-.+|++|..+|..|.
T Consensus 30 w~Le~ar~aLeqLf~~G~LRK 50 (68)
T 3i71_A 30 WPLEKARNALEQLFSAGTLRK 50 (68)
T ss_dssp CCHHHHHHHHHHHHHTTSEEE
T ss_pred CcHHHHHHHHHHHHhcchhhh
Confidence 468889999999999999974
No 138
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=22.48 E-value=2.6e+02 Score=21.37 Aligned_cols=97 Identities=12% Similarity=0.096 Sum_probs=56.1
Q ss_pred CChHHHHHHHHHHHHcCCCeeeccCCCCC----CcHHHHHHHhhccCC-CCCEEEEeccCCCcCCCCCCCCCCHHHHHHH
Q 030178 34 KPEPDMIALIRHAINSGITFLDTSDIYGP----HTNEILLGKAFKGGF-RERAELATKFGIGIVDGKYGYHGDPAYVRAA 108 (182)
Q Consensus 34 ~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~----g~~e~~lG~~l~~~~-r~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~ 108 (182)
.+.++..++++.+.+.|++.|.-+. |. ..-.+++ +.+++.. ...+.|.|.... +.+
T Consensus 50 ls~e~i~~~i~~~~~~g~~~i~~tG--GEPll~~~l~~li-~~~~~~~~~~~i~i~TNG~l---------------l~~- 110 (340)
T 1tv8_A 50 LTFDEMARIAKVYAELGVKKIRITG--GEPLMRRDLDVLI-AKLNQIDGIEDIGLTTNGLL---------------LKK- 110 (340)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEES--SCGGGSTTHHHHH-HHHTTCTTCCEEEEEECSTT---------------HHH-
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeC--CCccchhhHHHHH-HHHHhCCCCCeEEEEeCccc---------------hHH-
Confidence 4678899999999999998887543 21 1122323 3333321 125666665431 122
Q ss_pred HHHHHHHhCCCccceEEeecCCC--------CC-CHHHHHHHHHHHhHcCc
Q 030178 109 CEASLKRLDVDCIDLYYQHRIDT--------QT-PIEVTVISLSLLPSFVK 150 (182)
Q Consensus 109 ~~~sL~~Lg~~~lDl~~lh~~d~--------~~-~~~~~~~al~~l~~~G~ 150 (182)
.-+.|...|++++. +.++..++ .. .+++++++++.+++.|.
T Consensus 111 ~~~~L~~~g~~~v~-iSld~~~~~~~~~i~~~~~~~~~v~~~i~~l~~~g~ 160 (340)
T 1tv8_A 111 HGQKLYDAGLRRIN-VSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGL 160 (340)
T ss_dssp HHHHHHHHTCCEEE-EECCCSSHHHHHHHHSSCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHCCCCEEE-EecCCCCHHHHHHhhCCCCCHHHHHHHHHHHHHCCC
Confidence 22345556665554 33444322 12 57889999999999986
No 139
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=22.44 E-value=1.4e+02 Score=22.90 Aligned_cols=68 Identities=9% Similarity=-0.035 Sum_probs=33.4
Q ss_pred CCHHHHHHHHHHHHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCccccccceeeccchhHHHHHHHhc
Q 030178 100 GDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSILYCGVVALVAKQMLLLFT 173 (182)
Q Consensus 100 ~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~~iGvs~~~~~~~~~l~~ 173 (182)
.+.+. +..+-+.|.++|+++|..-.+..|.....+.+.++.+..+.+...++ +.++. -+.+.++++.+
T Consensus 27 ~~~e~-k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~~~d~~~~~~~~~~~~~~~----~~~l~-~~~~~i~~a~~ 94 (302)
T 2ftp_A 27 IEVAD-KIRLVDDLSAAGLDYIEVGSFVSPKWVPQMAGSAEVFAGIRQRPGVT----YAALA-PNLKGFEAALE 94 (302)
T ss_dssp CCHHH-HHHHHHHHHHTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCTTSE----EEEEC-CSHHHHHHHHH
T ss_pred CCHHH-HHHHHHHHHHcCcCEEEECCCcCccccccccCHHHHHHHhhhcCCCE----EEEEe-CCHHHHHHHHh
Confidence 44444 33455566778888888776544421111223444445554443333 13333 35556655554
No 140
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=22.29 E-value=2.8e+02 Score=21.68 Aligned_cols=93 Identities=16% Similarity=0.031 Sum_probs=47.2
Q ss_pred CCEEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHHHHhCCCccceEE-eecCCCCC--CHHHHHHHHHHHhHcCcccccc
Q 030178 79 ERAELATKFGIGIVDGKYGYHGDPAYVRAACEASLKRLDVDCIDLYY-QHRIDTQT--PIEVTVISLSLLPSFVKLKCSI 155 (182)
Q Consensus 79 ~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL~~Lg~~~lDl~~-lh~~d~~~--~~~~~~~al~~l~~~G~ir~~~ 155 (182)
+++-|..|+.+..... ...+.+... .+-+.|+..|++|+++-. -..+.... .....++.+.++++.-.+--
T Consensus 218 ~d~pV~vRls~~~~~~---~g~~~~~~~-~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPV-- 291 (349)
T 3hgj_A 218 RELPLFVRVSATDWGE---GGWSLEDTL-AFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRT-- 291 (349)
T ss_dssp TTSCEEEEEESCCCST---TSCCHHHHH-HHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEE--
T ss_pred CCceEEEEeccccccC---CCCCHHHHH-HHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceE--
Confidence 3455777876542111 124455543 355667888987777642 01111100 11113445555555323332
Q ss_pred ceeeccc-hhHHHHHHHhcC--CCeee
Q 030178 156 LYCGVVA-LVAKQMLLLFTN--IDFFI 179 (182)
Q Consensus 156 ~~iGvs~-~~~~~~~~l~~~--~~~~~ 179 (182)
+++.. ++++.++++++. +|++.
T Consensus 292 --i~~Ggi~t~e~a~~~l~~G~aD~V~ 316 (349)
T 3hgj_A 292 --GAVGLITTPEQAETLLQAGSADLVL 316 (349)
T ss_dssp --EECSSCCCHHHHHHHHHTTSCSEEE
T ss_pred --EEECCCCCHHHHHHHHHCCCceEEE
Confidence 55555 468888887763 67764
No 141
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=22.12 E-value=1.7e+02 Score=22.30 Aligned_cols=101 Identities=17% Similarity=0.069 Sum_probs=55.4
Q ss_pred CCCCCChHHHHHHHHHHHHcCCCee---eccCCCCCCcHHHHHHHhhccCCCCCEEEEeccCCCcCCCCCCCCCCHHHHH
Q 030178 30 YGPPKPEPDMIALIRHAINSGITFL---DTSDIYGPHTNEILLGKAFKGGFRERAELATKFGIGIVDGKYGYHGDPAYVR 106 (182)
Q Consensus 30 ~~~~~~~~~~~~~l~~a~~~G~~~~---Dta~~Yg~g~~e~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~i~ 106 (182)
+....+.+...++++.+.+.|...| ||...-.|....+++....+..+ ++-|....+.... .......
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~--~~~i~~H~Hn~~G-------la~An~l 219 (298)
T 2cw6_A 149 YEGKISPAKVAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVP--LAALAVHCHDTYG-------QALANTL 219 (298)
T ss_dssp TTBSCCHHHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHSC--GGGEEEEEBCTTS-------CHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCC--CCeEEEEECCCCc-------hHHHHHH
Confidence 3344578889999999999998765 66654333344555544433343 2334444443321 2222222
Q ss_pred HHHHHHHHHhCCCccceEEeecC---------CCCCCHHHHHHHHHHH
Q 030178 107 AACEASLKRLDVDCIDLYYQHRI---------DTQTPIEVTVISLSLL 145 (182)
Q Consensus 107 ~~~~~sL~~Lg~~~lDl~~lh~~---------d~~~~~~~~~~al~~l 145 (182)
+++ ..|.+++|.- +.-. .-..+.++.+..|+.+
T Consensus 220 aA~-----~aGa~~vd~t-v~GlG~cp~a~g~aGN~~~E~lv~~l~~~ 261 (298)
T 2cw6_A 220 MAL-----QMGVSVVDSS-VAGLGGCPYAQGASGNLATEDLVYMLEGL 261 (298)
T ss_dssp HHH-----HTTCCEEEEB-TTSCCCCTTSCSSCCBCBHHHHHHHHHHH
T ss_pred HHH-----HhCCCEEEee-cccccCCCCCCCCcCChhHHHHHHHHHhc
Confidence 322 2478888863 3321 1234577888888753
No 142
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=22.01 E-value=2.9e+02 Score=21.74 Aligned_cols=121 Identities=11% Similarity=0.064 Sum_probs=67.1
Q ss_pred ChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhcc-CCCCCEEEEeccCCCcCCCCCCCCCCHHHHHHHHHHHH
Q 030178 35 PEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKG-GFRERAELATKFGIGIVDGKYGYHGDPAYVRAACEASL 113 (182)
Q Consensus 35 ~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~sL 113 (182)
+.++..+..+.+.+.|++.|..--........+.+ +++++ .+ ++-|..... ...+.+...+-+ +.|
T Consensus 147 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~e~v-~avr~a~g--d~~l~vD~n---------~~~~~~~a~~~~-~~l 213 (384)
T 2pgw_A 147 TAEELARDAAVGHAQGERVFYLKVGRGEKLDLEIT-AAVRGEIG--DARLRLDAN---------EGWSVHDAINMC-RKL 213 (384)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHH-HHHHTTST--TCEEEEECT---------TCCCHHHHHHHH-HHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcCCCHHHHHHHH-HHHHHHcC--CcEEEEecC---------CCCCHHHHHHHH-HHH
Confidence 55667788888999999999853211111122333 44555 44 554544432 124555554433 467
Q ss_pred HHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCccccccceeeccchhHHHHHHHhc--CCCeeee
Q 030178 114 KRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSILYCGVVALVAKQMLLLFT--NIDFFIY 180 (182)
Q Consensus 114 ~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~~iGvs~~~~~~~~~l~~--~~~~~~~ 180 (182)
+.++++++. .|-+. +.|+.+.++++.-.+.- ..+=+-++++.++++++ .+|++.+
T Consensus 214 ~~~~i~~iE-----qP~~~----~~~~~~~~l~~~~~iPI---~~de~i~~~~~~~~~i~~~~~d~v~i 270 (384)
T 2pgw_A 214 EKYDIEFIE-----QPTVS----WSIPAMAHVREKVGIPI---VADQAAFTLYDVYEICRQRAADMICI 270 (384)
T ss_dssp GGGCCSEEE-----CCSCT----TCHHHHHHHHHHCSSCE---EESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred HhcCCCEEe-----CCCCh----hhHHHHHHHHhhCCCCE---EEeCCcCCHHHHHHHHHcCCCCEEEE
Confidence 777766544 44322 23666666666544431 13334557888888775 4676654
No 143
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=21.72 E-value=1.3e+02 Score=22.97 Aligned_cols=68 Identities=9% Similarity=-0.080 Sum_probs=36.5
Q ss_pred CCHHHHHHHHHHHHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCccccccceeeccchhHHHHHHHhc
Q 030178 100 GDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSILYCGVVALVAKQMLLLFT 173 (182)
Q Consensus 100 ~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~~iGvs~~~~~~~~~l~~ 173 (182)
.+.+... .+-+.|.++|+++|.+-....|....-+.+.++.++.+.+...++ +.++. .+...++++.+
T Consensus 24 ~~~e~k~-~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~~~~~----~~~l~-~~~~~i~~a~~ 91 (298)
T 2cw6_A 24 VSTPVKI-KLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKFPGIN----YPVLT-PNLKGFEAAVA 91 (298)
T ss_dssp CCHHHHH-HHHHHHHHTTCSEECCEECCCTTTCGGGTTHHHHHHHSCCCTTCB----CCEEC-CSHHHHHHHHH
T ss_pred CCHHHHH-HHHHHHHHcCcCEEEECCCcCcccccccCCHHHHHHHHhhCCCCE----EEEEc-CCHHhHHHHHH
Confidence 4455544 566677889999999877655531111233444455554432333 13333 45666666654
No 144
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=21.59 E-value=1.4e+02 Score=23.13 Aligned_cols=68 Identities=7% Similarity=-0.023 Sum_probs=36.7
Q ss_pred CCHHHHHHHHHHHHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCccccccceeeccchhHHHHHHHhc
Q 030178 100 GDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKCSILYCGVVALVAKQMLLLFT 173 (182)
Q Consensus 100 ~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~~~~~iGvs~~~~~~~~~l~~ 173 (182)
.+.+. +..+-+.|.++|+++|++-.+.+|.....+.+.++.++.+.+..-++ +.+++ -+...++++.+
T Consensus 25 ~~~e~-k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~~~~~----~~~l~-~~~~~i~~a~~ 92 (307)
T 1ydo_A 25 IATED-KITWINQLSRTGLSYIEITSFVHPKWIPALRDAIDVAKGIDREKGVT----YAALV-PNQRGLENALE 92 (307)
T ss_dssp CCHHH-HHHHHHHHHTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCTTCE----EEEEC-CSHHHHHHHHH
T ss_pred CCHHH-HHHHHHHHHHcCCCEEEECCCcCcccccccCCHHHHHHHhhhcCCCe----EEEEe-CCHHhHHHHHh
Confidence 44444 44466677888998888877655532111234445555555444444 24444 24556665554
No 145
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=21.48 E-value=2.5e+02 Score=20.77 Aligned_cols=98 Identities=14% Similarity=0.025 Sum_probs=57.2
Q ss_pred CCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhccCCCCCEEEEeccCCCcCCCCCCCCCCHHHHHHHHHH
Q 030178 32 PPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKGGFRERAELATKFGIGIVDGKYGYHGDPAYVRAACEA 111 (182)
Q Consensus 32 ~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~ 111 (182)
...+.++..++++.|.+.|..-+-..+.|- +...+.|+ + +-|++-++.... ..+.+.....++.
T Consensus 12 p~~t~~~i~~l~~~A~~~~~~aVcv~p~~v-----~~a~~~l~----g-v~v~tvigFP~G------~~~~~~k~~E~~~ 75 (226)
T 1vcv_A 12 PYLTVDEAVAGARKAEELGVAAYCVNPIYA-----PVVRPLLR----K-VKLCVVADFPFG------ALPTASRIALVSR 75 (226)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEECGGGH-----HHHGGGCS----S-SEEEEEESTTTC------CSCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEECHHHH-----HHHHHHhC----C-CeEEEEeCCCCC------CCchHHHHHHHHH
Confidence 345789999999999999998888666543 22222332 2 667777765431 2334433344555
Q ss_pred HHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhH
Q 030178 112 SLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPS 147 (182)
Q Consensus 112 sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~ 147 (182)
-+.|.+-||+++--..-.........+.+.++++
T Consensus 76 --i~~GAdEID~Vinig~~~~g~~~~v~~ei~~v~~ 109 (226)
T 1vcv_A 76 --LAEVADEIDVVAPIGLVKSRRWAEVRRDLISVVG 109 (226)
T ss_dssp --HTTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHH
T ss_pred --HHCCCCEEEEecchhhhcCCCHHHHHHHHHHHHH
Confidence 4578999998763321112234444555555544
No 146
>2eee_A Uncharacterized protein C6ORF130; macro domain, A1PP domain, ADP-ribose binding, rossmann fold, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l8r_A*
Probab=21.40 E-value=67 Score=22.05 Aligned_cols=32 Identities=19% Similarity=0.299 Sum_probs=24.2
Q ss_pred CCCCcccCcceeccccCCCCCCCCCChHHHHHHHHHHHHc
Q 030178 10 GSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINS 49 (182)
Q Consensus 10 g~~g~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~ 49 (182)
+-.-+.+|+||-|...+ +.+++.+++..++..
T Consensus 108 ~~~sIa~P~IgtG~~G~--------~~~~v~~ii~~~~~~ 139 (149)
T 2eee_A 108 GVTDLSMPRIGCGLDRL--------QWENVSAMIEEVFEA 139 (149)
T ss_dssp TCCEEECCCCCCTTTTC--------CHHHHHHHHHHHHTT
T ss_pred CCCEEEeCCCCCCCCCC--------CHHHHHHHHHHHhcc
Confidence 33467899999888765 668888898888753
No 147
>3pkz_A Recombinase SIN; small serine recombinase, resolvase, DNA, recombination; 1.80A {Staphylococcus aureus}
Probab=21.38 E-value=62 Score=21.22 Aligned_cols=44 Identities=14% Similarity=0.170 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhCCCccceEEeecCCCCC-CHHHHHHHHHHHhHcCcc
Q 030178 106 RAACEASLKRLDVDCIDLYYQHRIDTQT-PIEVTVISLSLLPSFVKL 151 (182)
Q Consensus 106 ~~~~~~sL~~Lg~~~lDl~~lh~~d~~~-~~~~~~~al~~l~~~G~i 151 (182)
|..+.+.|+.+... |.+.++..|... ...+....++.|.+.|.-
T Consensus 43 Rp~l~~ll~~~~~g--d~lvv~~ldRl~R~~~~~~~~~~~l~~~gv~ 87 (124)
T 3pkz_A 43 RPILQKALNFVEMG--DRFIVESIDRLGRNYNEVIHTVNYLKDKEVQ 87 (124)
T ss_dssp CHHHHHHHHHCCTT--CEEEESSHHHHCSCHHHHHHHHHHHHHTTCE
T ss_pred CHHHHHHHHHHHCC--CEEEEeecccccCCHHHHHHHHHHHHHCCCE
Confidence 45666677777654 999999876643 356888888899888854
No 148
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, ALP; structural genomics, PSI-2, protein structu initiative; 1.90A {Thermoplasma acidophilum}
Probab=20.89 E-value=1.8e+02 Score=18.85 Aligned_cols=57 Identities=11% Similarity=0.173 Sum_probs=40.9
Q ss_pred ceecCCCCcccCcceeccccCCCCCCCCCChHHHHHHHHHHHHcCC--CeeeccCCCCCCcHHHHHHHhhcc
Q 030178 6 RMKLGSQGLEVSAQGLGCMGMSALYGPPKPEPDMIALIRHAINSGI--TFLDTSDIYGPHTNEILLGKAFKG 75 (182)
Q Consensus 6 ~~~lg~~g~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a~~~G~--~~~Dta~~Yg~g~~e~~lG~~l~~ 75 (182)
+...|..|-++-.+++|++. ..+.++++..-+.|+ .+++....+. -.++.+.+.+++
T Consensus 6 ~~~~g~~g~dv~iv~~Gs~~-----------~~a~eA~~~L~~~Gi~v~vi~~r~~~P--~d~~~l~~~~~~ 64 (118)
T 3ju3_A 6 AVLIGEKEADITFVTWGSQK-----------GPILDVIEDLKEEGISANLLYLKMFSP--FPTEFVKNVLSS 64 (118)
T ss_dssp EEEESCSSCSEEEEEEGGGH-----------HHHHHHHHHHHHTTCCEEEEEECSSCS--CCHHHHHHHHTT
T ss_pred eeeeCCCCCCEEEEEECccH-----------HHHHHHHHHHHHCCCceEEEEECeEec--CCHHHHHHHHcC
Confidence 34456678888889999863 446666777667786 4888888777 566677777755
No 149
>3c8z_A Cysteinyl-tRNA synthetase; cysteine ligase, rossmann fold, Cys-SA inhibitor, zinc binding, ATP-binding, aminoacyl-tRNA synthetase; HET: 5CA 1PE EPE; 1.60A {Mycobacterium smegmatis}
Probab=20.80 E-value=1.9e+02 Score=23.39 Aligned_cols=47 Identities=13% Similarity=-0.078 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCccc
Q 030178 102 PAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLK 152 (182)
Q Consensus 102 ~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir 152 (182)
.+...+.+++.+++||+...|.+.--. .....+.+.+++|+++|.+-
T Consensus 106 ~~~~~~~~~~~~~~Lgi~~~d~~~r~t----~~~~~~~~~~~~L~~kG~~Y 152 (414)
T 3c8z_A 106 GDRETQLFREDMAALRVLPPHDYVAAT----DAIAEVVEMVEKLLASGAAY 152 (414)
T ss_dssp HHHHHHHHHHHHHHTTCCCCSEEEEGG----GCHHHHHHHHHHHHHHTSEE
T ss_pred HHHHHHHHHHHHHHcCCCCCcceeccc----chHHHHHHHHHHHHHCCCEE
Confidence 456778899999999998678653322 24556778899999999983
No 150
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=20.72 E-value=2.8e+02 Score=21.02 Aligned_cols=81 Identities=16% Similarity=0.145 Sum_probs=51.1
Q ss_pred CCCChHHHHHHHHHHHHc--CCCeeeccCCCCCCcHHHHHHHhhccCCCC-CEEEEeccCCCcCCCCCCCCCCHHHHHHH
Q 030178 32 PPKPEPDMIALIRHAINS--GITFLDTSDIYGPHTNEILLGKAFKGGFRE-RAELATKFGIGIVDGKYGYHGDPAYVRAA 108 (182)
Q Consensus 32 ~~~~~~~~~~~l~~a~~~--G~~~~Dta~~Yg~g~~e~~lG~~l~~~~r~-~~~i~tK~~~~~~~~~~~~~~~~~~i~~~ 108 (182)
...+.++..++++.|.+. |..-+-..+.|- +...+.|+.. .. .+-|++-++.... ..+.+.....
T Consensus 23 p~~t~~~i~~lc~eA~~~~~~~~aVcV~p~~v-----~~a~~~L~~~-g~~~v~v~tVigFP~G------~~~~~~Kv~E 90 (260)
T 1p1x_A 23 DDDTDEKVIALCHQAKTPVGNTAAICIYPRFI-----PIARKTLKEQ-GTPEIRIATVTNFPHG------NDDIDIALAE 90 (260)
T ss_dssp TTCCHHHHHHHHHHTEETTEECSEEECCGGGH-----HHHHHHHHHT-TCTTSEEEEEESTTTC------CSCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhccCCceEEEECHHHH-----HHHHHHhhhc-CCCCceEEEEeCCCCC------CCcHHHHHHH
Confidence 345789999999999988 887777655443 2344455420 12 5777777765431 2334444444
Q ss_pred HHHHHHHhCCCccceEE
Q 030178 109 CEASLKRLDVDCIDLYY 125 (182)
Q Consensus 109 ~~~sL~~Lg~~~lDl~~ 125 (182)
++..++ .|.+-||+++
T Consensus 91 ~~~Av~-~GAdEIDmVi 106 (260)
T 1p1x_A 91 TRAAIA-YGADEVDVVF 106 (260)
T ss_dssp HHHHHH-HTCSEEEEEC
T ss_pred HHHHHH-cCCCEEEEec
Confidence 555555 5889999876
No 151
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=20.68 E-value=1.4e+02 Score=23.18 Aligned_cols=27 Identities=15% Similarity=0.215 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHhCCC--ccceEEeecCC
Q 030178 104 YVRAACEASLKRLDVD--CIDLYYQHRID 130 (182)
Q Consensus 104 ~i~~~~~~sL~~Lg~~--~lDl~~lh~~d 130 (182)
.+.+.+++.|++.|++ -+|.+.+|..+
T Consensus 247 ~~~~~i~~~l~~~gl~~~did~~v~Hq~~ 275 (345)
T 3s21_A 247 LAQKTFVAAKQVLGWAVEELDQFVIHQVS 275 (345)
T ss_dssp HHHHHHHHHHHHHCCCGGGCSEEEECCSC
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEeCCCC
Confidence 4556778889887764 58999999864
No 152
>4ets_A Ferric uptake regulation protein; metal binding protein, transcription factor; 2.10A {Campylobacter jejuni subsp}
Probab=20.53 E-value=60 Score=22.63 Aligned_cols=39 Identities=15% Similarity=0.116 Sum_probs=28.0
Q ss_pred CCHHHHHHHHHHHHHHhCCCccceEEeecCCCCCCHHHHHHHHHHHhHcCcccc
Q 030178 100 GDPAYVRAACEASLKRLDVDCIDLYYQHRIDTQTPIEVTVISLSLLPSFVKLKC 153 (182)
Q Consensus 100 ~~~~~i~~~~~~sL~~Lg~~~lDl~~lh~~d~~~~~~~~~~al~~l~~~G~ir~ 153 (182)
.+.+.|.+.+.+. .|.+..+..-++++|+.|.+.|+|+.
T Consensus 49 ~sA~eI~~~l~~~---------------~~~~~is~aTVYRtL~~L~e~Glv~~ 87 (162)
T 4ets_A 49 YTPESLYMEIKQA---------------EPDLNVGIATVYRTLNLLEEAEMVTS 87 (162)
T ss_dssp BCHHHHHHHHHHH---------------CGGGCCCHHHHHHHHHHHHHTTSEEE
T ss_pred CCHHHHHHHHHhh---------------cCCCCCCHHHHHHHHHHHHHCCCEEE
Confidence 5677777766533 01123457789999999999999987
No 153
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=20.41 E-value=1.5e+02 Score=22.92 Aligned_cols=28 Identities=14% Similarity=0.207 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHhCC--CccceEEeecCC
Q 030178 103 AYVRAACEASLKRLDV--DCIDLYYQHRID 130 (182)
Q Consensus 103 ~~i~~~~~~sL~~Lg~--~~lDl~~lh~~d 130 (182)
+.+.+.+++.|++.|+ +-+|.+.+|.++
T Consensus 224 ~~~~~~i~~~l~~~gl~~~did~~v~Hq~~ 253 (323)
T 3il3_A 224 RELSNVVEETLLANNLDKKDLDWLVPHQAN 253 (323)
T ss_dssp HHHHHHHHHHHHTTTCCTTTCCEEEECCSC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEcCCC
Confidence 3456678888887765 578999999874
No 154
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=20.39 E-value=3.2e+02 Score=21.58 Aligned_cols=62 Identities=16% Similarity=0.087 Sum_probs=35.4
Q ss_pred HHHHHHHHHhCCCccceEEeecCC----CCCCHHHHHHHHHHHhHcCccccccceeeccchhHHHHHHHhcC--CCeee
Q 030178 107 AACEASLKRLDVDCIDLYYQHRID----TQTPIEVTVISLSLLPSFVKLKCSILYCGVVALVAKQMLLLFTN--IDFFI 179 (182)
Q Consensus 107 ~~~~~sL~~Lg~~~lDl~~lh~~d----~~~~~~~~~~al~~l~~~G~ir~~~~~iGvs~~~~~~~~~l~~~--~~~~~ 179 (182)
..+-+.|+..|++|+++ |... +..+ ++.+.++++.=.+-- |++..++++..+++++. +|++.
T Consensus 253 ~~~a~~l~~~G~d~i~v---~~~~~~~~~~~~----~~~~~~i~~~~~iPv----i~~Ggi~~~~a~~~l~~g~aD~V~ 320 (365)
T 2gou_A 253 TAAAALLNKHRIVYLHI---AEVDWDDAPDTP----VSFKRALREAYQGVL----IYAGRYNAEKAEQAINDGLADMIG 320 (365)
T ss_dssp HHHHHHHHHTTCSEEEE---ECCBTTBCCCCC----HHHHHHHHHHCCSEE----EEESSCCHHHHHHHHHTTSCSEEE
T ss_pred HHHHHHHHHcCCCEEEE---eCCCcCCCCCcc----HHHHHHHHHHCCCcE----EEeCCCCHHHHHHHHHCCCcceeh
Confidence 34556677888777665 4321 1112 233444444333332 67777788888888873 67664
No 155
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=20.38 E-value=4e+02 Score=22.63 Aligned_cols=94 Identities=10% Similarity=-0.069 Sum_probs=59.1
Q ss_pred ChHHHHHHHHHHHHcCCCeeeccCCCCC-------C---cHHHHHHHhhcc---CCCCCEEEEeccCCCcCCCCCCCCCC
Q 030178 35 PEPDMIALIRHAINSGITFLDTSDIYGP-------H---TNEILLGKAFKG---GFRERAELATKFGIGIVDGKYGYHGD 101 (182)
Q Consensus 35 ~~~~~~~~l~~a~~~G~~~~Dta~~Yg~-------g---~~e~~lG~~l~~---~~r~~~~i~tK~~~~~~~~~~~~~~~ 101 (182)
.++...++=+..+++|-+.+.|.....+ | ..+++...+.+- ...++ +|+.-+++...--+.....+
T Consensus 42 ~Pe~V~~iH~~Yl~AGAdii~TnTf~a~~~~l~~~g~~~~~~el~~~av~lAr~a~~~~-~VAGsiGP~g~~~~~~~~~~ 120 (566)
T 1q7z_A 42 APDVVLKVHRSYIESGSDVILTNTFGATRMKLRKHGLEDKLDPIVRNAVRIARRAAGEK-LVFGDIGPTGELPYPLGSTL 120 (566)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECSCTTCSHHHHGGGTCGGGHHHHHHHHHHHHHHHHTTS-EEEEEECCCSCCBTTTSSBC
T ss_pred CHHHHHHHHHHHHHhhcceeecCcccCCHHHHHhcCchHHHHHHHHHHHHHHHHHHhCC-eEEEeCCCcccCCCCCCCCC
Confidence 4677888889999999999999874331 1 223333333322 11124 88888887653211123457
Q ss_pred HHHHHHHHHHHHHHhCCCccceEEeecC
Q 030178 102 PAYVRAACEASLKRLDVDCIDLYYQHRI 129 (182)
Q Consensus 102 ~~~i~~~~~~sL~~Lg~~~lDl~~lh~~ 129 (182)
.+.+++...+-.+.|--..+|++++.-.
T Consensus 121 ~~e~~~~~~~qi~~l~~~gvD~l~~ET~ 148 (566)
T 1q7z_A 121 FEEFYENFRETVEIMVEEGVDGIIFETF 148 (566)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEecc
Confidence 7888887777777774467888888753
No 156
>2g1p_A DNA adenine methylase; DAM methylation, GATC recognition, base flipping, bacterial factor, transferase-DNA complex; HET: DNA SAH; 1.89A {Escherichia coli} PDB: 2ore_D*
Probab=20.22 E-value=90 Score=23.84 Aligned_cols=39 Identities=3% Similarity=-0.204 Sum_probs=28.7
Q ss_pred HHHHHHHHHhHcCccccccceeeccchhHHHHHHHhcCCCeeeec
Q 030178 137 VTVISLSLLPSFVKLKCSILYCGVVALVAKQMLLLFTNIDFFIYQ 181 (182)
Q Consensus 137 ~~~~al~~l~~~G~ir~~~~~iGvs~~~~~~~~~l~~~~~~~~~q 181 (182)
+..+.|.++.++|- + +=+||.+...++++++++.+..++
T Consensus 208 ~L~~~l~~l~~~~~-~-----~~lS~~d~~~i~~ly~~~~i~~~~ 246 (278)
T 2g1p_A 208 HLAEIAEGLVERHI-P-----VLISNHDTMLTREWYQRAKLHVVK 246 (278)
T ss_dssp HHHHHHHHHHHTTC-C-----EEEEEECCHHHHHHTTTSEEEEEC
T ss_pred HHHHHHHHHHhcCC-e-----EEEEcCCCHHHHHHhcCCcEEEEE
Confidence 35666666665543 4 779999999999999888776654
No 157
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A*
Probab=20.03 E-value=72 Score=26.04 Aligned_cols=39 Identities=13% Similarity=0.278 Sum_probs=31.2
Q ss_pred cccCcceeccccCCCCCCCCCChHHHHHHHHHH-----HHcCCCeee
Q 030178 14 LEVSAQGLGCMGMSALYGPPKPEPDMIALIRHA-----INSGITFLD 55 (182)
Q Consensus 14 ~~vs~l~lGt~~~~~~~~~~~~~~~~~~~l~~a-----~~~G~~~~D 55 (182)
.+.|++|..+|-. +...++++...+.++.+ -++|+.+|-
T Consensus 9 ~~~ppmgwnsW~~---~~~~~~e~~i~~~ad~~~~~gl~~~G~~~~~ 52 (417)
T 1szn_A 9 GKVPSLGWNSWNA---YHCDIDESKFLSAAELIVSSGLLDAGYNYVN 52 (417)
T ss_dssp TTSCCEEEESHHH---HTTCCCHHHHHHHHHHHHHTTHHHHTCCEEE
T ss_pred CCCCCEEEEchHh---hCcCCCHHHHHHHHHHHHHcCchhhCCCEEE
Confidence 5678999999953 45567899999999999 778988764
No 158
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=20.02 E-value=2.8e+02 Score=20.77 Aligned_cols=79 Identities=10% Similarity=0.108 Sum_probs=50.7
Q ss_pred CCCChHHHHHHHHHHHHcCCCeeeccCCCCCCcHHHHHHHhhccCCCCCEEEEeccCCCcCCCCCCCCCCHHHHHHHHHH
Q 030178 32 PPKPEPDMIALIRHAINSGITFLDTSDIYGPHTNEILLGKAFKGGFRERAELATKFGIGIVDGKYGYHGDPAYVRAACEA 111 (182)
Q Consensus 32 ~~~~~~~~~~~l~~a~~~G~~~~Dta~~Yg~g~~e~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~~~~i~~~~~~ 111 (182)
...+.++..++++.|.+.|..-+-..+.|- +...+.|+ ..++-|++=++.... ..+.+.-....++
T Consensus 38 p~~t~~~i~~lc~eA~~~~~~aVcV~p~~v-----~~a~~~L~---~s~v~v~tVigFP~G------~~~~~~Kv~Ea~~ 103 (239)
T 3ngj_A 38 ADATEEQIRKLCSEAAEYKFASVCVNPTWV-----PLCAELLK---GTGVKVCTVIGFPLG------ATPSEVKAYETKV 103 (239)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEECGGGH-----HHHHHHHT---TSSCEEEEEESTTTC------CSCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEECHHHH-----HHHHHHhC---CCCCeEEEEeccCCC------CCchHHHHHHHHH
Confidence 345789999999999999998888766553 33445553 345666666664431 1233433445666
Q ss_pred HHHHhCCCccceEE
Q 030178 112 SLKRLDVDCIDLYY 125 (182)
Q Consensus 112 sL~~Lg~~~lDl~~ 125 (182)
.++. |.+-||+.+
T Consensus 104 Ai~~-GAdEIDmVi 116 (239)
T 3ngj_A 104 AVEQ-GAEEVDMVI 116 (239)
T ss_dssp HHHT-TCSEEEEEC
T ss_pred HHHc-CCCEEEEEe
Confidence 6665 888888753
Done!