Query 030182
Match_columns 181
No_of_seqs 111 out of 152
Neff 5.5
Searched_HMMs 13730
Date Mon Mar 25 15:46:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030182.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/030182hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1l5ja1 a.118.15.1 (A:1-160) A 34.5 22 0.0016 26.0 4.4 17 111-127 7-23 (160)
2 d2f6ma1 a.2.17.1 (A:322-385) V 29.1 46 0.0033 20.6 4.6 43 67-109 17-59 (64)
3 d1uptb_ a.193.1.1 (B:) Golgi a 21.5 34 0.0025 20.9 2.8 32 71-107 24-55 (58)
4 d1eexb_ c.51.3.1 (B:) Diol deh 11.7 47 0.0034 24.6 1.8 15 112-126 125-139 (178)
5 d1st6a3 a.24.9.1 (A:253-371) V 11.2 2E+02 0.015 19.4 5.1 25 139-163 63-87 (119)
6 d1iwpb_ c.51.3.1 (B:) Diol deh 10.4 55 0.004 24.3 1.8 15 112-126 127-141 (184)
7 d1b0ba_ a.1.1.2 (A:) Hemoglobi 5.9 3.5E+02 0.026 17.2 4.5 39 60-98 54-95 (142)
8 d1st6a4 a.24.9.1 (A:372-488) V 5.4 4.3E+02 0.031 17.6 5.2 22 142-163 57-78 (117)
9 d1fxkc_ a.2.5.1 (C:) Prefoldin 5.0 4.1E+02 0.03 16.8 6.3 23 67-89 93-115 (133)
10 d1oe8a1 a.45.1.1 (A:85-207) Cl 5.0 2.7E+02 0.019 17.4 3.2 23 87-109 100-122 (123)
No 1
>d1l5ja1 a.118.15.1 (A:1-160) Aconitase B, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=34.51 E-value=22 Score=26.01 Aligned_cols=17 Identities=29% Similarity=0.431 Sum_probs=13.7
Q ss_pred HhhHHHHHcCCCCCCCC
Q 030182 111 DENKARKAAGEEPLPEE 127 (181)
Q Consensus 111 ~EN~~R~~~ge~pLPee 127 (181)
.|=+.|.+.|-||+|-+
T Consensus 7 ~~i~eR~~~GlpPlPLd 23 (160)
T d1l5ja1 7 KHVAERAAEGIAPKPLD 23 (160)
T ss_dssp HHHHHHHHTTCCCCCCC
T ss_pred HHHHHHHHCCCCCCCCC
Confidence 45567889999999984
No 2
>d2f6ma1 a.2.17.1 (A:322-385) Vacuolar protein sorting-associated protein 23, VPS23 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=29.06 E-value=46 Score=20.63 Aligned_cols=43 Identities=23% Similarity=0.199 Sum_probs=30.1
Q ss_pred HHHHHHHHHHhHHHhHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 030182 67 LERNMEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQSWLQKR 109 (181)
Q Consensus 67 Lek~l~~l~~~vD~l~~Eq~k~~~yqR~l~rqq~~~~~~~~KR 109 (181)
+|..+..|-+.+..=.-+-.-|-+.-|.++|+|--.-..++|=
T Consensus 17 ieDaiy~L~~aL~~G~I~~d~ylK~vR~LaReQF~~RAl~~KI 59 (64)
T d2f6ma1 17 LTDTIEALSRMLHRGTIPLDTFVKQGRELARQQFLVRWHIQRI 59 (64)
T ss_dssp HHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555566666655555567789999999999987665555553
No 3
>d1uptb_ a.193.1.1 (B:) Golgi autoantigen, golgin-245 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.46 E-value=34 Score=20.90 Aligned_cols=32 Identities=28% Similarity=0.427 Sum_probs=22.1
Q ss_pred HHHHHHhHHHhHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 030182 71 MEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQSWLQ 107 (181)
Q Consensus 71 l~~l~~~vD~l~~Eq~k~~~yqR~l~rqq~~~~~~~~ 107 (181)
|--.+-.|=-+..+| -|+-+.|++++..+|++
T Consensus 24 laKVi~av~kF~~~Q-----~q~iL~kE~~r~~swl~ 55 (58)
T d1uptb_ 24 MAKVITTVLKFPDDQ-----TQKILEREDARLMSWLR 55 (58)
T ss_dssp HHHHHHHHTTCCHHH-----HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHH-----HHHHHHHHhcchhhHHh
Confidence 333444444455554 47889999999999986
No 4
>d1eexb_ c.51.3.1 (B:) Diol dehydratase, beta subunit {Klebsiella oxytoca [TaxId: 571]}
Probab=11.68 E-value=47 Score=24.57 Aligned_cols=15 Identities=47% Similarity=0.581 Sum_probs=12.6
Q ss_pred hhHHHHHcCCCCCCC
Q 030182 112 ENKARKAAGEEPLPE 126 (181)
Q Consensus 112 EN~~R~~~ge~pLPe 126 (181)
-||+|-++||.|.|-
T Consensus 125 ~NAARlvKG~~p~Pv 139 (178)
T d1eexb_ 125 KNAARYAKRESPQPV 139 (178)
T ss_dssp HHHHHHHTTCCCCCC
T ss_pred HHHHHHhccCCCCCc
Confidence 389999999988764
No 5
>d1st6a3 a.24.9.1 (A:253-371) Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=11.19 E-value=2e+02 Score=19.38 Aligned_cols=25 Identities=12% Similarity=0.117 Sum_probs=21.7
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHhh
Q 030182 139 EPPRLESFLIANRIANYCNQINGKA 163 (181)
Q Consensus 139 ePSRL~slL~s~Qi~~yc~~i~~f~ 163 (181)
+|-|-+-+=+...|+.+++++..++
T Consensus 63 ~~~r~~Il~~c~ei~~lt~qLadLr 87 (119)
T d1st6a3 63 GKERREILGTCKTLGQMTDQLADLR 87 (119)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHT
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHH
Confidence 5668788888999999999999997
No 6
>d1iwpb_ c.51.3.1 (B:) Diol dehydratase, beta subunit {Klebsiella pneumoniae [TaxId: 573]}
Probab=10.44 E-value=55 Score=24.31 Aligned_cols=15 Identities=47% Similarity=0.563 Sum_probs=12.6
Q ss_pred hhHHHHHcCCCCCCC
Q 030182 112 ENKARKAAGEEPLPE 126 (181)
Q Consensus 112 EN~~R~~~ge~pLPe 126 (181)
-||+|-++|+.|.|-
T Consensus 127 ~NAARlvKG~~p~Pv 141 (184)
T d1iwpb_ 127 KNAARYARKESPSPV 141 (184)
T ss_dssp HHHHHHHTTCCCCCC
T ss_pred HHHHHHhcCCCCCCc
Confidence 389999999988664
No 7
>d1b0ba_ a.1.1.2 (A:) Hemoglobin I {Clam (Lucina pectinata) [TaxId: 29163]}
Probab=5.94 E-value=3.5e+02 Score=17.21 Aligned_cols=39 Identities=3% Similarity=0.078 Sum_probs=26.6
Q ss_pred CCCCChhHHHHHHHHHHhHHHhHH---HHhHHHHHHHHHHHH
Q 030182 60 QLSSSPFLERNMEFLIECMDDLSV---EQQKFQFYYRSLTRQ 98 (181)
Q Consensus 60 ~ls~~~~Lek~l~~l~~~vD~l~~---Eq~k~~~yqR~l~rq 98 (181)
++-.++.+..|...++..+|.+-. +...+..+-+.+.+.
T Consensus 54 ~l~~~~~~~~H~~~v~~~l~~~v~~ldd~~~l~~~l~~lg~~ 95 (142)
T d1b0ba_ 54 TVKNTPEMAAQAQSFKGLVSNWVDNLDNAGALEGQCKTFAAN 95 (142)
T ss_dssp GCTTSHHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHH
T ss_pred HHhhChHHHHHHHHHHHHHHHHHHccCchhHHHHHHHHHHHh
Confidence 466788899998888888888744 344555555555544
No 8
>d1st6a4 a.24.9.1 (A:372-488) Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=5.41 E-value=4.3e+02 Score=17.57 Aligned_cols=22 Identities=9% Similarity=0.090 Sum_probs=19.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHhh
Q 030182 142 RLESFLIANRIANYCNQINGKA 163 (181)
Q Consensus 142 RL~slL~s~Qi~~yc~~i~~f~ 163 (181)
|-+-+=+...|+.+++++..++
T Consensus 57 r~~il~lc~ei~~lt~qLadLr 78 (117)
T d1st6a4 57 RDDILRSLGEISALTAKLSDLR 78 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 6777778899999999999997
No 9
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=4.97 E-value=4.1e+02 Score=16.84 Aligned_cols=23 Identities=4% Similarity=0.118 Sum_probs=10.1
Q ss_pred HHHHHHHHHHhHHHhHHHHhHHH
Q 030182 67 LERNMEFLIECMDDLSVEQQKFQ 89 (181)
Q Consensus 67 Lek~l~~l~~~vD~l~~Eq~k~~ 89 (181)
+++.++.+-..++.+..+..+..
T Consensus 93 l~~ri~~l~~~~~~l~~~~~~~~ 115 (133)
T d1fxkc_ 93 IKSQKNELESTLQKMGENLRAIT 115 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444444433333
No 10
>d1oe8a1 a.45.1.1 (A:85-207) Class alpha GST {Blood fluke (Schistosoma haematobium) [TaxId: 6185]}
Probab=4.95 E-value=2.7e+02 Score=17.36 Aligned_cols=23 Identities=13% Similarity=0.197 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 030182 87 KFQFYYRSLTRQQAQQQSWLQKR 109 (181)
Q Consensus 87 k~~~yqR~l~rqq~~~~~~~~KR 109 (181)
++..|...+.+..-++..|+++|
T Consensus 100 ~L~~~~~~v~~~~P~I~~yl~sR 122 (123)
T d1oe8a1 100 EIHKHRENLLASSPRLAKYLSDR 122 (123)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcChHHHHHHHcc
Confidence 44444444444567899999988
Done!