Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>030190
MACYCNRSLISSKLDPCSPFSSSSLRLAFHRNSSVLLGGGIKLHDSSTISKKAQLSPLSF
SASFRNHICRAAEYKFPDPIPEFADSETQKFRTHLLNKLAKKDMFGDSLEDVVGICTEIF
STFLHSEYGGPGTLLVLPFIDMADTLNERGLPGGPQAARAAVKWAQRHVDKDWKEWTGDS
D

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  030190
        (181 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006116 - symbol:PRIN2 "AT1G10522" species:3...   533  2.4e-51   1


>TAIR|locus:505006116 [details] [associations]
            symbol:PRIN2 "AT1G10522" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009642
            "response to light intensity" evidence=IMP] [GO:0010468 "regulation
            of gene expression" evidence=IMP] [GO:0042646 "plastid nucleoid"
            evidence=IDA] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC007067
            GO:GO:0010468 GO:GO:0009642 GO:GO:0042646 UniGene:At.42176
            UniGene:At.42177 EMBL:AY086634 EMBL:BT030627 IPI:IPI00526585
            RefSeq:NP_001077502.1 RefSeq:NP_563872.1 STRING:Q9XIK0 PaxDb:Q9XIK0
            PRIDE:Q9XIK0 EnsemblPlants:AT1G10522.1 EnsemblPlants:AT1G10522.2
            GeneID:837593 KEGG:ath:AT1G10522 TAIR:At1g10522 eggNOG:NOG307738
            HOGENOM:HOG000215006 InParanoid:Q9XIK0 OMA:FVCRRAK PhylomeDB:Q9XIK0
            ProtClustDB:CLSN2687759 Genevestigator:Q9XIK0 Uniprot:Q9XIK0
        Length = 179

 Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
 Identities = 107/175 (61%), Positives = 131/175 (74%)

Query:     6 NRSLISSKLDPCSPFSSSSLRLAFHRNSS-VLLGGGIKLHDSSTISKKAQLSPLSFSA-S 63
             + +L SS+L   +  SS S R A    SS   +   IK         + ++   S S+ S
Sbjct:     5 HEALFSSRLLQVN--SSFSFRCALPIISSPAAVSCAIKSTQFFKQRCRTKVRDFSLSSLS 62

Query:    64 FRNHICRAAEYKFPDPIPEFADSETQKFRTHLLNKLAKKDMFGDSLEDVVGICTEIFSTF 123
              R  +CRAAEYKFPDPIPEFA++ET+KFR H+LNKL+K+D+F DS++++VG+CTEIF TF
Sbjct:    63 RRGFVCRAAEYKFPDPIPEFAEAETEKFRDHMLNKLSKRDLFEDSVDEIVGVCTEIFETF 122

Query:   124 LHSEYGGPGTLLVLPFIDMADTLNERGLPGGPQAARAAVKWAQRHVDKDWKEWTG 178
             L SEYGGPGTLLV+PFIDMADTLNER LPGGPQAARAA+KWAQ HVDKDWKEWTG
Sbjct:   123 LRSEYGGPGTLLVIPFIDMADTLNERELPGGPQAARAAIKWAQDHVDKDWKEWTG 177


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.134   0.414    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      181       181   0.00095  109 3  11 22  0.42    32
                                                     31  0.40    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  604 (64 KB)
  Total size of DFA:  173 KB (2100 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.33u 0.14s 17.47t   Elapsed:  00:00:01
  Total cpu time:  17.33u 0.14s 17.47t   Elapsed:  00:00:01
  Start:  Fri May 10 12:30:49 2013   End:  Fri May 10 12:30:50 2013

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