BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030190
(181 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P11720|TRPI_PSEAE HTH-type transcriptional regulator TrpI OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=trpI PE=4 SV=2
Length = 295
Score = 34.3 bits (77), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 102 KDMFGDSLEDVVGICTEIFSTFLHSEY--GGPGTLLVLPFIDMADTLNERGLP 152
+D GD+ E + G+C E+ + + G PG+LL FI D LN R LP
Sbjct: 70 RDACGDAFERLRGVCAELRRQTAEAPFVLGVPGSLLARWFIPRLDQLN-RALP 121
>sp|Q6TL19|GUC2G_MOUSE Guanylate cyclase 2G OS=Mus musculus GN=Gucy2g PE=1 SV=1
Length = 1100
Score = 33.5 bits (75), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 39/93 (41%), Gaps = 15/93 (16%)
Query: 1 MACYCNRSLISSKLDPCSPFSSSSLRLAFHRNSS----VLLGGGIKLHDSSTISKKAQLS 56
M YC L ++ S SSSL L H + S +L GG L TIS K +
Sbjct: 1014 MPRYC---LFGDTVNMASRMESSSLPLRIHVSQSTAGALLAAGGYHLQKRGTISVKGKGE 1070
Query: 57 PLSFSASFRNHICRAAEYKFPDPIPEFADSETQ 89
+F ++ FP P+PEF + E +
Sbjct: 1071 QTTFWLKGKD--------GFPVPLPEFTEEEAK 1095
>sp|Q6ZTY8|CL063_HUMAN Putative uncharacterized protein C12orf63 OS=Homo sapiens
GN=C12orf63 PE=2 SV=2
Length = 1197
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 8/115 (6%)
Query: 36 LLGGGIKLHDSSTISKKAQLSPLSFSASFRNHICRAAEYKFPD----PIPEFADSETQKF 91
L+ I+ + S Q++PL A R + R ++K PD P + +K
Sbjct: 188 LVSLAIQFNTVSHERYTEQVTPLLVYAQ-RQLLLRIQKFKGPDITQQPCARYEAEYGEKI 246
Query: 92 RTHLLNKLAKKDMFGDSLEDVVGICTEIFSTFLHSEYGGPGTLLVLPFIDMADTL 146
N + K+ S + CT++ + SEY L+ +P +D+ DTL
Sbjct: 247 TCR--NFIGKQLKINSSTIEATSNCTDLLKMLISSEYSRAKALVCVP-VDVTDTL 298
>sp|A1UR20|RIMM_BARBK Ribosome maturation factor RimM OS=Bartonella bacilliformis (strain
ATCC 35685 / KC583) GN=rimM PE=3 SV=1
Length = 191
Score = 32.3 bits (72), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 43/109 (39%), Gaps = 10/109 (9%)
Query: 1 MACYCNRSLISSKLDPCSPFSSSSLRLAFHRNSSVLLG--------GGIKLHDSSTISKK 52
+ Y R + LD + + L + N++ LLG G L + IS K
Sbjct: 84 VQLYIERDQFADDLDTDEFYQIDLIGLRVYDNTNQLLGEVSGFFNFGAGDLLEVRLISHK 143
Query: 53 AQLSPLSFSASFRNHICRAAEYKFPDPIPEFADSETQKFRTHLLNKLAK 101
+L P FS + IC A+ + DP+ S+ F LN L K
Sbjct: 144 TELIP--FSKAAVPEICVASGFLVVDPVAAGLFSDPHSFNDLALNDLEK 190
>sp|Q92628|K0232_HUMAN Uncharacterized protein KIAA0232 OS=Homo sapiens GN=KIAA0232 PE=1
SV=5
Length = 1395
Score = 31.6 bits (70), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 13/90 (14%)
Query: 70 RAAEYK-----FPDPIPEF--ADSETQKFRTHLLNKLAKKDMFGDSLED----VVGICTE 118
+ EYK + +PI E+ S K T N+ D+ +++E+ V G+C
Sbjct: 392 KDTEYKEEPLWYTEPIAEYFVPLSRKSKLETTYRNRQDTSDLTSEAVEELSESVHGLC-- 449
Query: 119 IFSTFLHSEYGGPGTLLVLPFIDMADTLNE 148
I + LH Y GT + F++M +NE
Sbjct: 450 ISNNNLHKTYLAAGTFIDGHFVEMPAVINE 479
>sp|P53111|ARI1_YEAST NADPH-dependent aldehyde reductase ARI1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ARI1 PE=1 SV=1
Length = 347
Score = 31.6 bits (70), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 104 MFGDSLEDVVGICTEIFSTFLHSEYGGPGTLLVLPFIDMADT 145
MF DSL+ + + I S +HS+ GG PFID+ D
Sbjct: 208 MFADSLKHGINTSSGIVSELIHSKVGGEFYNYCGPFIDVRDV 249
>sp|O74369|CSS1_SCHPO Inositol phosphosphingolipids phospholipase C
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=css1 PE=1 SV=2
Length = 424
Score = 31.6 bits (70), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 15/85 (17%)
Query: 88 TQKFRTHLLN----KLAKKDMFGDSLEDVVGI-----------CTEIFSTFLHSEYGGPG 132
K+RT L KLAK D L++V I C ++S F HS G G
Sbjct: 22 VSKYRTERLKAVGEKLAKCDYDIVLLQEVWSIYDFQEIRNLVSCNLVYSRFFHSAAMGAG 81
Query: 133 TLLVLPFIDMADTLNERGLPGGPQA 157
+ F + ++N+ L G PQA
Sbjct: 82 LAMFSKFPIIESSMNKYPLNGRPQA 106
>sp|Q9VLA1|B3G2S_DROME Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase S
OS=Drosophila melanogaster GN=GlcAT-S PE=1 SV=2
Length = 409
Score = 30.8 bits (68), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 116 CTEIFSTFLHSEYGGPGTLLVLPFIDMADTLNERGLPGGPQAARAAVKWAQRHVDKDWKE 175
C + T L+ +G P T +V P + NE+ P G RAA++W ++H +
Sbjct: 173 CNDYMDTLLY-RFGMPFTHMVSPMP--SKFRNEKPAPRGVANRRAALQWIRQHNLTNGIL 229
Query: 176 WTGDSD 181
+ GD D
Sbjct: 230 YFGDDD 235
>sp|O97758|ZO1_CANFA Tight junction protein ZO-1 OS=Canis familiaris GN=TJP1 PE=1 SV=1
Length = 1769
Score = 30.4 bits (67), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 8/95 (8%)
Query: 16 PCSPFSSSSLRLAFHRNSSVLLGGGIKLH-DSSTISKK----AQLSPLSFSASFRNHICR 70
P P +SSSL L H + G I L +S +SK +Q P +F R +
Sbjct: 1437 PSQPGTSSSLALHTHAKGAHGEGNSISLDFQNSLVSKPDPPPSQNKPATFRPPNREDTVQ 1496
Query: 71 AAEY---KFPDPIPEFADSETQKFRTHLLNKLAKK 102
+ Y FPD P +TQK T N+ K
Sbjct: 1497 STFYPQKSFPDKAPVNGAEQTQKTVTPAYNRFTPK 1531
>sp|Q27031|HSP70_THEPA Heat shock 70 kDa protein OS=Theileria parva GN=TP02_0148 PE=2 SV=2
Length = 647
Score = 30.0 bits (66), Expect = 8.8, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 97 NKLAKKDMFGDSLEDVVGICTEIFSTFLHSEYGGPG 132
N+LA+ D F D L+ V G+C + T L+ G PG
Sbjct: 585 NQLAEHDEFEDKLKHVEGVCNPLV-TKLYQSGGAPG 619
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,017,983
Number of Sequences: 539616
Number of extensions: 2788812
Number of successful extensions: 5775
Number of sequences better than 100.0: 13
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 5773
Number of HSP's gapped (non-prelim): 14
length of query: 181
length of database: 191,569,459
effective HSP length: 110
effective length of query: 71
effective length of database: 132,211,699
effective search space: 9387030629
effective search space used: 9387030629
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)