Query 030190
Match_columns 181
No_of_seqs 19 out of 21
Neff 2.0
Searched_HMMs 13730
Date Mon Mar 25 15:59:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030190.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/030190hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1xfia_ e.50.1.1 (A:) Hypothet 55.0 4.3 0.00032 33.5 3.5 39 59-101 43-81 (360)
2 d2c12a2 e.6.1.1 (A:2-260) Nitr 36.4 9.9 0.00072 27.7 2.6 32 119-154 56-89 (259)
3 d1tx4a_ a.116.1.1 (A:) p50 Rho 34.1 37 0.0027 23.4 5.4 60 103-177 5-74 (196)
4 d1w66a1 d.104.1.3 (A:1-216) Li 33.9 8.4 0.00061 29.2 1.9 15 128-142 82-96 (216)
5 d1c1da2 c.58.1.1 (A:1-148) Phe 33.8 36 0.0026 24.3 5.4 99 27-132 27-147 (148)
6 d2bpta1 a.118.1.1 (A:1-861) Im 33.2 59 0.0043 24.3 6.6 60 109-171 795-857 (861)
7 d1vg5a_ a.5.2.1 (A:) Rhomboid 32.9 19 0.0014 23.0 3.4 35 135-171 25-59 (73)
8 d1r5la2 c.13.1.1 (A:91-275) Al 30.8 14 0.001 25.2 2.5 65 66-134 96-161 (185)
9 d1y5ea1 c.57.1.1 (A:12-166) Mo 30.7 7.3 0.00053 26.7 0.9 13 150-162 128-140 (155)
10 d1mkza_ c.57.1.1 (A:) MoaB {Es 28.6 8.9 0.00065 27.0 1.1 13 150-162 133-145 (170)
11 d1t47a2 d.32.1.3 (A:179-377) 4 27.0 21 0.0015 26.2 3.0 31 121-152 79-113 (199)
12 d2p90a1 c.56.8.1 (A:6-274) Hyp 25.2 18 0.0013 26.8 2.4 39 126-168 166-219 (269)
13 d1uuya_ c.57.1.1 (A:) Plant CN 24.0 9.2 0.00067 27.0 0.4 16 149-164 133-148 (161)
14 d2iy1a1 d.3.1.7 (A:419-643) Se 23.9 14 0.00099 25.8 1.4 36 65-100 186-221 (225)
15 d1zfsa1 a.39.1.2 (A:1-93) Calc 23.7 78 0.0057 19.5 5.4 55 107-162 2-58 (93)
16 d2f7wa1 c.57.1.1 (A:2-174) Mog 23.4 14 0.001 25.7 1.3 16 150-165 130-145 (173)
17 d1omwa1 a.91.1.1 (A:29-185) G- 23.1 66 0.0048 21.8 5.0 50 104-160 26-76 (157)
18 d1l5ja3 c.83.1.1 (A:373-862) A 22.8 30 0.0022 28.4 3.5 48 79-136 75-122 (490)
19 d2g2ca1 c.57.1.1 (A:1-163) Put 22.8 13 0.00097 25.6 1.1 14 150-163 135-148 (163)
20 d1pfva1 a.27.1.1 (A:389-550) M 22.5 60 0.0044 21.9 4.6 56 97-177 73-128 (162)
21 d1gd6a_ d.2.1.2 (A:) Lysozyme 21.5 40 0.0029 23.5 3.5 29 140-168 6-34 (119)
22 d1sqia2 d.32.1.3 (A:157-366) 4 20.6 26 0.0019 25.9 2.5 32 121-153 97-132 (210)
23 d1o3ua_ a.24.16.3 (A:) Hypothe 20.5 69 0.005 21.2 4.5 56 107-171 66-125 (126)
No 1
>d1xfia_ e.50.1.1 (A:) Hypothetical protein At2g17340 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=55.00 E-value=4.3 Score=33.55 Aligned_cols=39 Identities=23% Similarity=0.210 Sum_probs=28.5
Q ss_pred cccccccccccccccccCCCCCCchhhHHHHHHHHHHHHHhhh
Q 030190 59 SFSASFRNHICRAAEYKFPDPIPEFADSETQKFRTHLLNKLAK 101 (181)
Q Consensus 59 ~~~~s~~~~vcRa~~y~~pdPiPEFAd~ETeKFR~hLlkKLSk 101 (181)
.|..+...|+-||+ -+|-.+=|..-.++|+.+.+.+|.+
T Consensus 43 ~f~~~i~~~~~~A~----s~~~~~da~~Ra~~f~~~y~~~L~~ 81 (360)
T d1xfia_ 43 VFANSIPSFKKRAE----SDITVPDAPARAEKFAERYAGILED 81 (360)
T ss_dssp HHHTTHHHHHHHHH----TCTTSTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh----hCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 35667778888874 3333333888999999999999884
No 2
>d2c12a2 e.6.1.1 (A:2-260) Nitroalkane oxidase {Fusarium oxysporum [TaxId: 5507]}
Probab=36.36 E-value=9.9 Score=27.69 Aligned_cols=32 Identities=16% Similarity=0.204 Sum_probs=23.0
Q ss_pred HHHHHhhhhcCCCceeecccchhHHHHhhh--CCCCCc
Q 030190 119 IFSTFLHSEYGGPGTLLVLPFIDMADTLNE--RGLPGG 154 (181)
Q Consensus 119 IFs~FLh~eYgGpGTLlV~PF~DM~~~l~E--~gLPGa 154 (181)
+++-++=.||||.|- .++++...++| ++-|+.
T Consensus 56 ~~~~~vPee~GG~g~----~~~~~~~~~eel~~~~~~~ 89 (259)
T d2c12a2 56 LIKAQVPIPLGGTME----SLVHESIILEELFAVEPAT 89 (259)
T ss_dssp TTGGGSBGGGTCCBC----CHHHHHHHHHHHHTTCCTT
T ss_pred CCCcCCChHHhhccc----hhhhhhhhhhhcccccccc
Confidence 344456689999983 67889988888 555554
No 3
>d1tx4a_ a.116.1.1 (A:) p50 RhoGAP domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.10 E-value=37 Score=23.36 Aligned_cols=60 Identities=17% Similarity=0.257 Sum_probs=40.8
Q ss_pred cccccchhhHHhhhHHHHHHHhhhhcCCCceeeccc--chhHHHHhhhCCC--------CCchHHHHHHHHHHHhhhhhh
Q 030190 103 DMFGDSLEDVVGICTEIFSTFLHSEYGGPGTLLVLP--FIDMADTLNERGL--------PGGPQAARAAVKWAQRHVDKD 172 (181)
Q Consensus 103 D~fGD~leeVV~VCteIFs~FLh~eYgGpGTLlV~P--F~DM~~~l~E~gL--------PGap~AARaai~WAq~~vDkD 172 (181)
..||-++++++.... .+.- .| +.++...|+++|+ ||..+..+.-..+-.+..+-|
T Consensus 5 ~~FG~~L~~l~~~~~-------------~~~~--vP~~l~~~~~~l~~~gl~~eGIFR~~g~~~~i~~l~~~~~~~~~~~ 69 (196)
T d1tx4a_ 5 QQFGVSLQHLQEKNP-------------EQEP--IPIVLRETVAYLQAHALTTEGIFRRSANTQVVREVQQKYNMGLPVD 69 (196)
T ss_dssp CCTTSCHHHHHHHST-------------TCCS--SCHHHHHHHHHHHHHCTTCTTTTTSCCCHHHHHHHHHHHHTTCCCC
T ss_pred CCcCCCHHHHHhhCC-------------CCCC--CChHHHHHHHHHHHcCCCCCCeeecCCcHHHHHHHHHHHhCCCCcc
Confidence 478888888654321 1111 24 4477788887876 888888888888777777777
Q ss_pred hhccc
Q 030190 173 WKEWT 177 (181)
Q Consensus 173 Wk~Wt 177 (181)
+.+|.
T Consensus 70 ~~~~~ 74 (196)
T d1tx4a_ 70 FDQYN 74 (196)
T ss_dssp GGGSS
T ss_pred ccccc
Confidence 77775
No 4
>d1w66a1 d.104.1.3 (A:1-216) Lipoyltransferase LipB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=33.88 E-value=8.4 Score=29.17 Aligned_cols=15 Identities=40% Similarity=0.922 Sum_probs=13.7
Q ss_pred cCCCceeecccchhH
Q 030190 128 YGGPGTLLVLPFIDM 142 (181)
Q Consensus 128 YgGpGTLlV~PF~DM 142 (181)
|=|||-|.+-|.+|+
T Consensus 82 yHGPGQlV~Ypil~l 96 (216)
T d1w66a1 82 WHGPGQLVGYPIIGL 96 (216)
T ss_dssp EECTTEEEEEEECBB
T ss_pred EecCCceeeEEEecc
Confidence 778999999999995
No 5
>d1c1da2 c.58.1.1 (A:1-148) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}
Probab=33.82 E-value=36 Score=24.32 Aligned_cols=99 Identities=17% Similarity=0.197 Sum_probs=51.8
Q ss_pred eeeeccCccccccceeeccCcchh-------hhc-------ccccccccccccccccccccccCCCCCCchhhHHHHHHH
Q 030190 27 LAFHRNSSVLLGGGIKLHDSSTIS-------KKA-------QLSPLSFSASFRNHICRAAEYKFPDPIPEFADSETQKFR 92 (181)
Q Consensus 27 l~f~~~ss~~~~~~~~~~~s~t~~-------~~~-------~~~~~~~~~s~~~~vcRa~~y~~pdPiPEFAd~ETeKFR 92 (181)
++-|++.=--..+|+|.|+..+.. +++ -|.-+||--. +. --..+.+..+-.+.|.+++-
T Consensus 27 iaIH~t~lGPa~GG~R~~~y~s~~~al~dvl~LA~~MT~K~Alaglp~GGg-Kg------~I~~dp~~~~~~~~e~~~l~ 99 (148)
T d1c1da2 27 IRLDSTQLGPAAGGTRAAQYSNLADALTDAGKLAGAMTLKMAVSNLPMGGG-KS------VIALPAPRHSIDPSTWARIL 99 (148)
T ss_dssp EEEEECSSSSEEEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHTTCSCEEE-EE------EEECSSCGGGCCHHHHHHHH
T ss_pred EEEeCCCCCCCcceEEEecCCCHHHHHHHHHHHHHHHHHHHHhhcCCCCCc-ce------EEecCCCcCCCCHHHHHHHH
Confidence 445555544556899999876631 222 3566676541 21 12244445555666666554
Q ss_pred HHHHHH---hhhhcccccchhhHHhhhHHHHHHH-----hhhhcCCCc
Q 030190 93 THLLNK---LAKKDMFGDSLEDVVGICTEIFSTF-----LHSEYGGPG 132 (181)
Q Consensus 93 ~hLlkK---LSkkD~fGD~leeVV~VCteIFs~F-----Lh~eYgGpG 132 (181)
.-+.+. |.-+++-+.++---......|..++ ..-++||.|
T Consensus 100 r~~~~~l~~l~G~yi~a~DvGt~~~dm~~i~~~t~~vtGk~~~~GGsG 147 (148)
T d1c1da2 100 RIHAENIDKLSGNYWTGPDVNTNSADMDTLNDTTEFVFGRSLERGGAG 147 (148)
T ss_dssp HHHHHHHHHTTTSEEEEECTTCCHHHHHHHHHHCSCBCCCCGGGTSCC
T ss_pred HHHHHHHHHhCCcEeecCCCCCCHHHHHHHHhhCCeeEecCcccCCCC
Confidence 444443 4336777777643333333344443 234556655
No 6
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=33.17 E-value=59 Score=24.27 Aligned_cols=60 Identities=8% Similarity=0.166 Sum_probs=35.7
Q ss_pred hhhHHhhhHHHHHHHhhhhcCCCc--eeecccch-hHHHHhhhCCCCCchHHHHHHHHHHHhhhhh
Q 030190 109 LEDVVGICTEIFSTFLHSEYGGPG--TLLVLPFI-DMADTLNERGLPGGPQAARAAVKWAQRHVDK 171 (181)
Q Consensus 109 leeVV~VCteIFs~FLh~eYgGpG--TLlV~PF~-DM~~~l~E~gLPGap~AARaai~WAq~~vDk 171 (181)
.++++..|..+.+++.+. ||..- .++-+|++ +++....+. .-.-+++|....||++-+.+
T Consensus 795 ~~~~~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~ 857 (861)
T d2bpta1 795 EDATSRAAVGLIGDIAAM-FPDGSIKQFYGQDWVIDYIKRTRSG--QLFSQATKDTARWAREQQKR 857 (861)
T ss_dssp SHHHHHHHHHHHHHHHHH-CTTSTTGGGTTCHHHHHHHHHHHHC--SSSCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH-CcchhHHHHHhhHHHHHHHHHHHhC--cchhHHHHHHHHHHHHHHHH
Confidence 355666666777887765 76421 12234554 344333332 33578899999999876654
No 7
>d1vg5a_ a.5.2.1 (A:) Rhomboid family protein At3g58460 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=32.90 E-value=19 Score=23.02 Aligned_cols=35 Identities=14% Similarity=0.078 Sum_probs=29.8
Q ss_pred ecccchhHHHHhhhCCCCCchHHHHHHHHHHHhhhhh
Q 030190 135 LVLPFIDMADTLNERGLPGGPQAARAAVKWAQRHVDK 171 (181)
Q Consensus 135 lV~PF~DM~~~l~E~gLPGap~AARaai~WAq~~vDk 171 (181)
.+.+.-+++..|.+-|++ -..||.||..+.++|++
T Consensus 25 ~~~~~ee~i~~L~~MGF~--~~~a~~AL~~~~~n~e~ 59 (73)
T d1vg5a_ 25 RVAASEEQIQKLVAMGFD--RTQVEVALAAADDDLTV 59 (73)
T ss_dssp CSCCCHHHHHHHHTTTCC--HHHHHHHHHHHTSCHHH
T ss_pred CcCcCHHHHHHHHHhCCC--HHHHHHHHHHhCCCHHH
Confidence 455677899999999995 67899999999999875
No 8
>d1r5la2 c.13.1.1 (A:91-275) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.81 E-value=14 Score=25.23 Aligned_cols=65 Identities=17% Similarity=0.267 Sum_probs=36.1
Q ss_pred ccccccccccCCCCCCchhhHHHHHHHHHHHHHhhhh-cccccchhhHHhhhHHHHHHHhhhhcCCCcee
Q 030190 66 NHICRAAEYKFPDPIPEFADSETQKFRTHLLNKLAKK-DMFGDSLEDVVGICTEIFSTFLHSEYGGPGTL 134 (181)
Q Consensus 66 ~~vcRa~~y~~pdPiPEFAd~ETeKFR~hLlkKLSkk-D~fGD~leeVV~VCteIFs~FLh~eYgGpGTL 134 (181)
.+++|-...+.. -.|-++..=-.-+|-=|-+|+.+| ..+|.+.++... ++..+.|-.||||-++-
T Consensus 96 ~yP~rl~~i~iv-n~P~~~~~~~~~vk~fl~~k~~~Ki~~~~~~~~~~~~---~~~~~~LP~~~GG~~~~ 161 (185)
T d1r5la2 96 SFPLKVRGIHLI-NEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLL---QHFPDILPLEYGGEEFS 161 (185)
T ss_dssp SSSSCEEEEEEE-SCCGGGHHHHHHHGGGSCHHHHTTEEECCSSCHHHHH---HHSTTTSCGGGTCSSCC
T ss_pred hCchhhheeEEE-cCCHHHHHHHHHHHHhccHHHHhheEEeccchHHHHh---hcCHHhCCHhcCCCCCC
Confidence 455554433333 345565543333333333444443 455777666553 46678899999976643
No 9
>d1y5ea1 c.57.1.1 (A:12-166) MoaB {Bacillus cereus [TaxId: 1396]}
Probab=30.66 E-value=7.3 Score=26.68 Aligned_cols=13 Identities=38% Similarity=0.698 Sum_probs=12.0
Q ss_pred CCCCchHHHHHHH
Q 030190 150 GLPGGPQAARAAV 162 (181)
Q Consensus 150 gLPGap~AARaai 162 (181)
+|||.|.||..++
T Consensus 128 ~LPGnP~aa~~~~ 140 (155)
T d1y5ea1 128 SMPGSSGAVRLAM 140 (155)
T ss_dssp EECSSHHHHHHHH
T ss_pred ECCCCHHHHHHHH
Confidence 6999999999887
No 10
>d1mkza_ c.57.1.1 (A:) MoaB {Escherichia coli [TaxId: 562]}
Probab=28.58 E-value=8.9 Score=27.02 Aligned_cols=13 Identities=38% Similarity=0.705 Sum_probs=11.9
Q ss_pred CCCCchHHHHHHH
Q 030190 150 GLPGGPQAARAAV 162 (181)
Q Consensus 150 gLPGap~AARaai 162 (181)
+|||.|.||+.++
T Consensus 133 ~LPGnP~aa~~~~ 145 (170)
T d1mkza_ 133 AMPGSTKACRTAW 145 (170)
T ss_dssp EECSSHHHHHHHH
T ss_pred ECCCCHHHHHHHH
Confidence 6999999999886
No 11
>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}
Probab=26.95 E-value=21 Score=26.25 Aligned_cols=31 Identities=26% Similarity=0.539 Sum_probs=26.3
Q ss_pred HHHhhhhcCCCce----eecccchhHHHHhhhCCCC
Q 030190 121 STFLHSEYGGPGT----LLVLPFIDMADTLNERGLP 152 (181)
Q Consensus 121 s~FLh~eYgGpGT----LlV~PF~DM~~~l~E~gLP 152 (181)
.+||.+ +||||- |.|.=....+.+|+++|++
T Consensus 79 ~~FL~~-~~g~GiQHIAl~tdDI~~av~~L~~~G~~ 113 (199)
T d1t47a2 79 DEYLEF-YGGAGVQHIALNTGDIVETVRTMRAAGVQ 113 (199)
T ss_dssp HHHHHH-HTSCEEEEEEEECSCHHHHHHHHHHTTCC
T ss_pred hhhhhh-cCCCcceEEEEEcCCHHHHHHHHHHcCCC
Confidence 578887 899994 8888889999999999874
No 12
>d2p90a1 c.56.8.1 (A:6-274) Hypothetical protein Cgl1923 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=25.24 E-value=18 Score=26.78 Aligned_cols=39 Identities=15% Similarity=0.240 Sum_probs=27.3
Q ss_pred hhcCCCceeecccchhHHHHhhhCCCCC---------------chHHHHHHHHHHHhh
Q 030190 126 SEYGGPGTLLVLPFIDMADTLNERGLPG---------------GPQAARAAVKWAQRH 168 (181)
Q Consensus 126 ~eYgGpGTLlV~PF~DM~~~l~E~gLPG---------------ap~AARaai~WAq~~ 168 (181)
.+|+|||-+.-- +...++++|+|+ .|+||.++|..-.+-
T Consensus 166 ~~~~~~~gi~g~----l~~~~~~~gi~~i~l~a~vp~y~~~~pdP~AA~~lL~~l~~~ 219 (269)
T d2p90a1 166 TRMTVPGSASLM----LEKLLKDKGKNVSGYTVHVPHYVSASPYPAATLKLLQSIADS 219 (269)
T ss_dssp CCEEECCCHHHH----HHHHHHHTTCCEEEEEEEEEGGGTTSCCHHHHHHHHHHHHHH
T ss_pred cccCccchhHHH----HHHHHHhcCCCeEEEEEEcCccccCCCCHHHHHHHHHHHHHH
Confidence 467777654321 566778888876 289999999987653
No 13
>d1uuya_ c.57.1.1 (A:) Plant CNX1 G domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=23.98 E-value=9.2 Score=27.03 Aligned_cols=16 Identities=25% Similarity=0.528 Sum_probs=13.2
Q ss_pred CCCCCchHHHHHHHHH
Q 030190 149 RGLPGGPQAARAAVKW 164 (181)
Q Consensus 149 ~gLPGap~AARaai~W 164 (181)
-+|||.|.|++.++..
T Consensus 133 f~LPG~P~a~~~~l~~ 148 (161)
T d1uuya_ 133 INMPGNPNAVAECMEA 148 (161)
T ss_dssp EEECSSTTHHHHHHHH
T ss_pred EECCCCHHHHHHHHHH
Confidence 3699999999988754
No 14
>d2iy1a1 d.3.1.7 (A:419-643) Sentrin-specific protease 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.90 E-value=14 Score=25.81 Aligned_cols=36 Identities=17% Similarity=0.275 Sum_probs=29.2
Q ss_pred cccccccccccCCCCCCchhhHHHHHHHHHHHHHhh
Q 030190 65 RNHICRAAEYKFPDPIPEFADSETQKFRTHLLNKLA 100 (181)
Q Consensus 65 ~~~vcRa~~y~~pdPiPEFAd~ETeKFR~hLlkKLS 100 (181)
+-++|.-+++...++.-+|.+.....||.+|...|=
T Consensus 186 Gvfvl~~~~~~~~~~~~~~~q~~~~~~R~~~~~~l~ 221 (225)
T d2iy1a1 186 GMFACKYADCITKDRPINFTQQHMPYFRKRMVWEIL 221 (225)
T ss_dssp HHHHHHHHHHHHTTCCCCCCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCcCHHHHHHHHHHHHHHHH
Confidence 346777778887776568999999999999998774
No 15
>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]}
Probab=23.74 E-value=78 Score=19.50 Aligned_cols=55 Identities=16% Similarity=0.128 Sum_probs=34.3
Q ss_pred cchhhHHhhhHHHHHHHhhhhcCCCceeecccchhHHHHhhhCC--CCCchHHHHHHH
Q 030190 107 DSLEDVVGICTEIFSTFLHSEYGGPGTLLVLPFIDMADTLNERG--LPGGPQAARAAV 162 (181)
Q Consensus 107 D~leeVV~VCteIFs~FLh~eYgGpGTLlV~PF~DM~~~l~E~g--LPGap~AARaai 162 (181)
-.+|+-...--++|..|.-++ |..|+|=.+=|-.++..+.... -|..+...+..+
T Consensus 2 s~lE~~i~~l~~~F~~y~d~d-g~~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~ 58 (93)
T d1zfsa1 2 SELETAMETLINVFHAHSGKE-GDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIM 58 (93)
T ss_dssp CHHHHHHHHHHHHHHHHGGGS-SCCSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHcccC-CCCCEecHHHHHHHHHHhcccccccCCCHHHHHHHH
Confidence 346666666677787775553 6689998877666665554433 345566655543
No 16
>d2f7wa1 c.57.1.1 (A:2-174) MogA {Shewanella oneidensis [TaxId: 70863]}
Probab=23.37 E-value=14 Score=25.74 Aligned_cols=16 Identities=31% Similarity=0.644 Sum_probs=13.5
Q ss_pred CCCCchHHHHHHHHHH
Q 030190 150 GLPGGPQAARAAVKWA 165 (181)
Q Consensus 150 gLPGap~AARaai~WA 165 (181)
+|||.|.|++.++..-
T Consensus 130 ~lPGsp~a~~~~l~~i 145 (173)
T d2f7wa1 130 NLPGKPKSIRECLDAV 145 (173)
T ss_dssp EECSSHHHHHHHHHHH
T ss_pred ECCCCHHHHHHHHHHH
Confidence 6899999999988654
No 17
>d1omwa1 a.91.1.1 (A:29-185) G-protein coupled receptor kinase 2, N-terminal domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=23.11 E-value=66 Score=21.76 Aligned_cols=50 Identities=12% Similarity=0.251 Sum_probs=29.0
Q ss_pred ccccchhhHHhhhHHHHHHHhhhhcCCCceeecccchhHHHHhhh-CCCCCchHHHHH
Q 030190 104 MFGDSLEDVVGICTEIFSTFLHSEYGGPGTLLVLPFIDMADTLNE-RGLPGGPQAARA 160 (181)
Q Consensus 104 ~fGD~leeVV~VCteIFs~FLh~eYgGpGTLlV~PF~DM~~~l~E-~gLPGap~AARa 160 (181)
.|.+-+..=+|. +.|.+||.+|+...+.. ++...++++ +.++..-+..+.
T Consensus 26 sf~~ll~~~iG~--~lFr~FL~~e~se~~~~-----l~Fw~a~e~yk~~~~~~~~~~~ 76 (157)
T d1omwa1 26 TFEKIFSQKLGY--LLFRDFCLKHLEEAKPL-----VEFYEEIKKYEKLETEEERLVC 76 (157)
T ss_dssp SHHHHHTSHHHH--HHHHHHHHHHCTTTHHH-----HHHHHHHHHHHTCCSHHHHHHH
T ss_pred CHHHHHcCHHHH--HHHHHHHHhhchhHHHH-----HHHHHHHHHHHhcCCHHHHHHH
Confidence 444444444444 48999999998855443 366666666 456554333333
No 18
>d1l5ja3 c.83.1.1 (A:373-862) Aconitase B, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=22.85 E-value=30 Score=28.45 Aligned_cols=48 Identities=19% Similarity=0.128 Sum_probs=30.2
Q ss_pred CCCchhhHHHHHHHHHHHHHhhhhcccccchhhHHhhhHHHHHHHhhhhcCCCceeec
Q 030190 79 PIPEFADSETQKFRTHLLNKLAKKDMFGDSLEDVVGICTEIFSTFLHSEYGGPGTLLV 136 (181)
Q Consensus 79 PiPEFAd~ETeKFR~hLlkKLSkkD~fGD~leeVV~VCteIFs~FLh~eYgGpGTLlV 136 (181)
|.+.....|.++|-....++ +-+.....--+||-|+. .||--||+++|
T Consensus 75 p~~~~~~a~~~~~~r~fa~~-----~gi~~~~~~~GI~Hqv~-----~e~~~PG~~iv 122 (490)
T d1l5ja3 75 AYPKPVDVNTHHTLPDFIMN-----RGGVSLRPGDGVIHSWL-----NRMLLPDTVGT 122 (490)
T ss_dssp SSCCHHHHHHHHHHHHHHHT-----TTCEECCTTSBCHHHHH-----GGGCCTTCEEE
T ss_pred CCCCHHHHHHHHHHHHHHHH-----cCCeeecCCCceeeeec-----ccccCCCCeEE
Confidence 55666777777765544443 11223333458999975 45888999885
No 19
>d2g2ca1 c.57.1.1 (A:1-163) Putative molybdenum cofactor biosynthesis protein DIP0503 {Corynebacterium diphtheriae [TaxId: 1717]}
Probab=22.77 E-value=13 Score=25.56 Aligned_cols=14 Identities=7% Similarity=0.093 Sum_probs=11.4
Q ss_pred CCCCchHHHHHHHH
Q 030190 150 GLPGGPQAARAAVK 163 (181)
Q Consensus 150 gLPGap~AARaai~ 163 (181)
+|||.|.+++..+.
T Consensus 135 ~LPG~P~~~~~~~~ 148 (163)
T d2g2ca1 135 NAPSSSGGITDTWA 148 (163)
T ss_dssp EECSSHHHHHHHHH
T ss_pred ECCCCHHHHHHHHH
Confidence 48999999987653
No 20
>d1pfva1 a.27.1.1 (A:389-550) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]}
Probab=22.52 E-value=60 Score=21.89 Aligned_cols=56 Identities=14% Similarity=0.287 Sum_probs=28.5
Q ss_pred HHhhhhcccccchhhHHhhhHHHHHHHhhhhcCCCceeecccchhHHHHhhhCCCCCchHHHHHHHHHHHhhhhhhhhcc
Q 030190 97 NKLAKKDMFGDSLEDVVGICTEIFSTFLHSEYGGPGTLLVLPFIDMADTLNERGLPGGPQAARAAVKWAQRHVDKDWKEW 176 (181)
Q Consensus 97 kKLSkkD~fGD~leeVV~VCteIFs~FLh~eYgGpGTLlV~PF~DM~~~l~E~gLPGap~AARaai~WAq~~vDkDWk~W 176 (181)
|||.|+|.=.+.+..++.+|.+++.... .|..||+ |..|.. .|.|=+++..|..+
T Consensus 73 Wkl~k~~~~~~~~~~vl~~~~~~lr~~~---------~lL~P~m--------------P~~s~k--i~~~L~~~~~~~~~ 127 (162)
T d1pfva1 73 WVVAKQEGRDADLQAICSMGINLFRVLM---------TYLKPVL--------------PKLTER--AEAFLNTELTWDGI 127 (162)
T ss_dssp HHHTTSTTCHHHHHHHHHHHHHHHHHHH---------HHTTTTC--------------HHHHHH--HHHHHTSCCCTGGG
T ss_pred hhhcccchhhhHHHHHHHHHHHHHHHHH---------HHHHHHh--------------HHHHHH--HHHHhCCCCCHHHh
Confidence 3444444333445566666666655432 3345554 444433 34555566667655
Q ss_pred c
Q 030190 177 T 177 (181)
Q Consensus 177 t 177 (181)
.
T Consensus 128 ~ 128 (162)
T d1pfva1 128 Q 128 (162)
T ss_dssp G
T ss_pred h
Confidence 4
No 21
>d1gd6a_ d.2.1.2 (A:) Lysozyme {Silkworm (Bombyx mori) [TaxId: 7091]}
Probab=21.51 E-value=40 Score=23.49 Aligned_cols=29 Identities=7% Similarity=0.084 Sum_probs=24.6
Q ss_pred hhHHHHhhhCCCCCchHHHHHHHHHHHhh
Q 030190 140 IDMADTLNERGLPGGPQAARAAVKWAQRH 168 (181)
Q Consensus 140 ~DM~~~l~E~gLPGap~AARaai~WAq~~ 168 (181)
.+++++|++.|+||..++.-..|...+-.
T Consensus 6 CeLa~~L~~~G~~~~~l~~WvCia~~ES~ 34 (119)
T d1gd6a_ 6 CGLVHELRKHGFEENLMRNWVCLVEHESS 34 (119)
T ss_dssp HHHHHHHHHTTCCGGGHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhcC
Confidence 47899999999999998888888887743
No 22
>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.62 E-value=26 Score=25.86 Aligned_cols=32 Identities=28% Similarity=0.443 Sum_probs=26.5
Q ss_pred HHHhhhhcCCCc----eeecccchhHHHHhhhCCCCC
Q 030190 121 STFLHSEYGGPG----TLLVLPFIDMADTLNERGLPG 153 (181)
Q Consensus 121 s~FLh~eYgGpG----TLlV~PF~DM~~~l~E~gLPG 153 (181)
.+||.. |+||| -|-|.=.....+.|+++|+.-
T Consensus 97 ~~fl~~-~~G~GiQHIAf~t~DI~~av~~L~~~Gv~f 132 (210)
T d1sqia2 97 QEYVDY-NGGAGVQHIALRTEDIITTIRHLRERGMEF 132 (210)
T ss_dssp HHHHHH-HTSSEEEEEEEEESCHHHHHHHHHHHTCCB
T ss_pred HHHHhh-cCCCCeeEEEEEcCCHHHHHHHHHHcCCCC
Confidence 678877 89999 478888889999999988653
No 23
>d1o3ua_ a.24.16.3 (A:) Hypothetical protein TM0613 {Thermotoga maritima [TaxId: 2336]}
Probab=20.55 E-value=69 Score=21.15 Aligned_cols=56 Identities=9% Similarity=0.181 Sum_probs=26.6
Q ss_pred cchhhHHhhhHHHHHHHhhhhcCC--Cceeecccch--hHHHHhhhCCCCCchHHHHHHHHHHHhhhhh
Q 030190 107 DSLEDVVGICTEIFSTFLHSEYGG--PGTLLVLPFI--DMADTLNERGLPGGPQAARAAVKWAQRHVDK 171 (181)
Q Consensus 107 D~leeVV~VCteIFs~FLh~eYgG--pGTLlV~PF~--DM~~~l~E~gLPGap~AARaai~WAq~~vDk 171 (181)
+..+++.+.+.++=.-++...|++ ||.++-+-|+ |...+ =..|+..|.|.++.+.+
T Consensus 66 ~~~~~~~~~~~~L~~~yi~~RYP~~~~~~~P~~~y~~~~Ae~a---------l~~a~~vl~~v~~~l~~ 125 (126)
T d1o3ua_ 66 EIPEELMDHALELDKACIPTRYPDALPSGSPRNRYSRIEAERL---------VNYAEKIIRFCEDLLSR 125 (126)
T ss_dssp CCCHHHHHHHHHHHSCC------CCSCTTHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHTT
T ss_pred cccHHHHHHHHHHHHhhhhccCCCcccCCCccccCCHHHHHHH---------HHHHHHHHHHHHHHHhc
Confidence 445666666655555566677764 2322222221 11112 24678888898888764
Done!