Query 030194
Match_columns 181
No_of_seqs 14 out of 16
Neff 2.3
Searched_HMMs 13730
Date Mon Mar 25 16:05:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030194.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/030194hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1mj4a_ d.120.1.1 (A:) Sulfite 28.5 7.1 0.00052 24.9 0.5 19 25-43 24-42 (80)
2 d1soxa2 d.120.1.1 (A:3-93) Sul 25.3 9 0.00065 25.0 0.6 18 26-43 25-42 (91)
3 d1kcvh2 b.1.1.2 (H:117-217) Im 23.4 41 0.003 21.4 3.6 35 37-73 3-39 (101)
4 d1wlga_ b.152.1.1 (A:) Flagell 22.8 77 0.0056 23.5 5.7 43 32-79 218-261 (293)
5 d1cyoa_ d.120.1.1 (A:) Cytochr 22.3 11 0.00083 24.5 0.6 17 26-42 26-42 (88)
6 d1f7da_ b.85.4.1 (A:) Deoxyuri 20.7 36 0.0026 23.0 3.1 35 12-48 2-38 (118)
7 d1lqva_ d.19.1.1 (A:) Endothel 20.4 12 0.00089 27.5 0.5 44 12-60 96-142 (172)
8 d2hnga1 d.33.1.2 (A:5-128) Hyp 20.3 44 0.0032 24.2 3.6 49 25-82 46-96 (124)
9 d1tola2 d.212.1.1 (A:125-216) 19.7 13 0.00097 24.3 0.5 21 8-28 32-52 (92)
10 d2puza1 b.92.1.10 (A:17-79,A:3 19.0 16 0.0012 24.2 0.8 33 12-46 54-86 (103)
No 1
>d1mj4a_ d.120.1.1 (A:) Sulfite oxidase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.54 E-value=7.1 Score=24.94 Aligned_cols=19 Identities=11% Similarity=0.106 Sum_probs=16.2
Q ss_pred CCCceeeeeeeccCCCCce
Q 030194 25 SSGKAYDIVSNDFQEPDEM 43 (181)
Q Consensus 25 SsGk~YdlvSfaaQ~pDat 43 (181)
-.|++|||-.|...-|.-.
T Consensus 24 i~g~VYDvT~f~~~HPGG~ 42 (80)
T d1mj4a_ 24 LGSEVFDVTEFVDLHPGGP 42 (80)
T ss_dssp ETTEEEECTTTGGGSTTCH
T ss_pred ECCEEEeeeeeHhhcCChh
Confidence 3688999999999999863
No 2
>d1soxa2 d.120.1.1 (A:3-93) Sulfite oxidase, N-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=25.31 E-value=9 Score=25.05 Aligned_cols=18 Identities=11% Similarity=0.126 Sum_probs=16.0
Q ss_pred CCceeeeeeeccCCCCce
Q 030194 26 SGKAYDIVSNDFQEPDEM 43 (181)
Q Consensus 26 sGk~YdlvSfaaQ~pDat 43 (181)
.|++|||-.|..+-|.-.
T Consensus 25 ~g~VYDvT~f~~~HPGG~ 42 (91)
T d1soxa2 25 GTDVFDVTDFVELHPGGP 42 (91)
T ss_dssp TTEEEECTTTTTTSTTCH
T ss_pred CCEEEeccceecccCCcH
Confidence 689999999999999863
No 3
>d1kcvh2 b.1.1.2 (H:117-217) Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.41 E-value=41 Score=21.36 Aligned_cols=35 Identities=20% Similarity=0.332 Sum_probs=22.7
Q ss_pred cCCCCceEEecCCCCCcccceeeeeEEeee--cCCchhh
Q 030194 37 FQEPDEMVFLNYPSEPKIVGKISRRVSLVH--YPEPKEV 73 (181)
Q Consensus 37 aQ~pDatVfl~S~se~kivGKISRRVslV~--YPeP~El 73 (181)
.+.|...+|.|+.++. .-|++ .-||||. ||+.=.+
T Consensus 3 ~~aP~V~~l~p~~~~~-~~~~~-tl~Cl~~gf~P~~i~v 39 (101)
T d1kcvh2 3 TTAPSVFPLVPGSATA-AASAV-TLGCLVKGYFPEPVTV 39 (101)
T ss_dssp CBCCEEEEECCCSCCT-TCSEE-EEEEEEEEEBSSCCEE
T ss_pred cCCCEEEeECCCcccc-CCCeE-EEEEEEEEEeCCCCEE
Confidence 4668677777875443 33444 6889988 7765444
No 4
>d1wlga_ b.152.1.1 (A:) Flagellar hook protein flgE {Salmonella typhimurium [TaxId: 90371]}
Probab=22.83 E-value=77 Score=23.45 Aligned_cols=43 Identities=16% Similarity=0.340 Sum_probs=27.4
Q ss_pred eeeeccCCCCceEEec-CCCCCcccceeeeeEEeeecCCchhhhccCCc
Q 030194 32 IVSNDFQEPDEMVFLN-YPSEPKIVGKISRRVSLVHYPEPKEVEELNPD 79 (181)
Q Consensus 32 lvSfaaQ~pDatVfl~-S~se~kivGKISRRVslV~YPeP~Elek~~~~ 79 (181)
|.+|.- +.|-+|+.- +--+.+.+|+ |+|++|+.|+-|++..-.
T Consensus 218 l~~~~i-~~dG~i~~~ysNG~~~~lgq----iala~F~Np~gL~~~g~n 261 (293)
T d1wlga_ 218 LVSYQI-NNDGTVVGNYSNEQEQVLGQ----IVLANFANNEGLASQGDN 261 (293)
T ss_dssp EEEEEE-CTTCEEEEEETTSCEEEEEE----ECEEECSCGGGSEECSTT
T ss_pred eeeeee-cCCeEEEEEEcCCcEEEEEE----EEEEEecChHHhhhccCC
Confidence 344433 445555444 3345555564 799999999999996644
No 5
>d1cyoa_ d.120.1.1 (A:) Cytochrome b5 {Cow (Bos taurus) [TaxId: 9913]}
Probab=22.33 E-value=11 Score=24.51 Aligned_cols=17 Identities=24% Similarity=0.247 Sum_probs=15.1
Q ss_pred CCceeeeeeeccCCCCc
Q 030194 26 SGKAYDIVSNDFQEPDE 42 (181)
Q Consensus 26 sGk~YdlvSfaaQ~pDa 42 (181)
.|++|||-.|....|.-
T Consensus 26 ~g~VYDvT~f~~~HPGG 42 (88)
T d1cyoa_ 26 HYKVYDLTKFLEEHPGG 42 (88)
T ss_dssp TTEEEECTTTTTTCTTC
T ss_pred CCEEEecchhhcccCCc
Confidence 58999999999999874
No 6
>d1f7da_ b.85.4.1 (A:) Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) {Feline immunodeficiency virus [TaxId: 11673]}
Probab=20.74 E-value=36 Score=23.03 Aligned_cols=35 Identities=23% Similarity=0.446 Sum_probs=22.6
Q ss_pred EecCCCccccccCCCCceeeeeeeccC--CCCceEEecC
Q 030194 12 ELRGNGRLGSFEDSSGKAYDIVSNDFQ--EPDEMVFLNY 48 (181)
Q Consensus 12 ~l~~DG~lgsfe~SsGk~YdlvSfaaQ--~pDatVfl~S 48 (181)
-|+.||.|-.-+++.| |||.+...- .|..+++||.
T Consensus 2 ~~~~~~ilP~r~~dAG--~Dl~~~~~~~I~P~~~~~i~t 38 (118)
T d1f7da_ 2 IIEGDGILDKRSEDAG--YDLLAAKEIHLLPGEVKVIPT 38 (118)
T ss_dssp CEESSSBCCCCTTCSS--EEEECSSCEEECTTCEEEEEC
T ss_pred eEcCCccCCCCCCccC--EEEEcCCCEEECCCCEEEEEC
Confidence 3678888888777666 999775321 2455555554
No 7
>d1lqva_ d.19.1.1 (A:) Endothelial protein C receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.37 E-value=12 Score=27.47 Aligned_cols=44 Identities=20% Similarity=0.206 Sum_probs=29.1
Q ss_pred EecCCCcc-cccc--CCCCceeeeeeeccCCCCceEEecCCCCCcccceeee
Q 030194 12 ELRGNGRL-GSFE--DSSGKAYDIVSNDFQEPDEMVFLNYPSEPKIVGKISR 60 (181)
Q Consensus 12 ~l~~DG~l-gsfe--~SsGk~YdlvSfaaQ~pDatVfl~S~se~kivGKISR 60 (181)
+|+.||.+ .+|. .=+|. |+++| ++|-...+|.+.+...+-.|.+
T Consensus 96 El~~dG~~~~gf~q~aydG~--Dflsf---d~~~~sW~a~~~~~~~~a~~~~ 142 (172)
T d1lqva_ 96 ELPPEGSRAHVFFEVAVNGS--SFVSF---RPERALWQADTQVTSGVVTFTL 142 (172)
T ss_dssp EECSSCCCCEEEEEEEETTE--EEEEE---ETTTTEEEESCCCCCHHHHHHH
T ss_pred eECCCCCeeeeEEEEEECCE--EEEEE---eCCCCeEEeCCccccHHHHHHH
Confidence 68888875 4665 33343 45555 7888999998777655555554
No 8
>d2hnga1 d.33.1.2 (A:5-128) Hypothetical protein SP1558 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=20.27 E-value=44 Score=24.22 Aligned_cols=49 Identities=16% Similarity=0.192 Sum_probs=34.3
Q ss_pred CCCceeeeeeeccCCCCceEEecCCCCCcccceeeeeEEeeec--CCchhhhccCCcccc
Q 030194 25 SSGKAYDIVSNDFQEPDEMVFLNYPSEPKIVGKISRRVSLVHY--PEPKEVEELNPDKIR 82 (181)
Q Consensus 25 SsGk~YdlvSfaaQ~pDatVfl~S~se~kivGKISRRVslV~Y--PeP~Elek~~~~~~~ 82 (181)
..|+.|+++-+ |+=-..+-.|-|.||+-|=|.-| -||.||++-..+.|.
T Consensus 46 ~~g~~~~v~l~---------F~vv~~~F~iSG~IsQivqi~d~~~g~~sdl~q~e~~~Ls 96 (124)
T d2hnga1 46 NQVTSLIVILS---------FMIVFDKFVISGTISQVNHIDGRIVNEPSELNQEEVETLA 96 (124)
T ss_dssp TTEEEEEEEEE---------EEEECSSEEEEEEEEEEEEEETCCCSSGGGSCHHHHHHHH
T ss_pred hcCcEEEEEEE---------EEEeccceEEEeeEeeeeeecccccCCcccCCHHHHHHHH
Confidence 46888888733 22224467788999999999653 699999875555543
No 9
>d1tola2 d.212.1.1 (A:125-216) TolA {Escherichia coli [TaxId: 562]}
Probab=19.68 E-value=13 Score=24.27 Aligned_cols=21 Identities=24% Similarity=0.412 Sum_probs=17.4
Q ss_pred eeEEEecCCCccccccCCCCc
Q 030194 8 ELSLELRGNGRLGSFEDSSGK 28 (181)
Q Consensus 8 elsl~l~~DG~lgsfe~SsGk 28 (181)
+|.|+|+.||.+-+++-+||-
T Consensus 32 ~v~i~l~~~G~v~~v~~sSG~ 52 (92)
T d1tola2 32 TLRIKLAPDGMLLDIKPEGGD 52 (92)
T ss_dssp EEEEEECTTSCEEEEEEEEEC
T ss_pred EEEEEEeCCccEEEeEecCCC
Confidence 578899999999888777764
No 10
>d2puza1 b.92.1.10 (A:17-79,A:381-420) Imidazolonepropionase {Agrobacterium tumefaciens [TaxId: 358]}
Probab=19.01 E-value=16 Score=24.22 Aligned_cols=33 Identities=30% Similarity=0.485 Sum_probs=26.9
Q ss_pred EecCCCccccccCCCCceeeeeeeccCCCCceEEe
Q 030194 12 ELRGNGRLGSFEDSSGKAYDIVSNDFQEPDEMVFL 46 (181)
Q Consensus 12 ~l~~DG~lgsfe~SsGk~YdlvSfaaQ~pDatVfl 46 (181)
.++-+|+|+++| -||.=|||-+..++|++-++-
T Consensus 54 viDl~Grlv~i~--~Gk~AD~~i~~~~~~~~l~Y~ 86 (103)
T d2puza1 54 TTDCGGRWITLE--AGKSADFAIWDIERPAELVYR 86 (103)
T ss_dssp EEECTTCEEECC--TTSBCCEEEECCSSTTHHHHC
T ss_pred hcCCCCCEEEee--ccceeeEEEEcCCCHHHHHHh
Confidence 468889999976 699999999999988865443
Done!