BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>030202
MADNDDHHGKQEQPKWQGRACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQGISG
QPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLAINAEEMTLTYSIVDGNVGFYGYVST
LTVAPKENGCYIEWKYEVEPVKGWRLEDLDCFISSGLQVMARRMKEALQAYEVIMHYSSS
S

High Scoring Gene Products

Symbol, full name Information P value
AT2G25770 protein from Arabidopsis thaliana 1.3e-31
AT4G32870 protein from Arabidopsis thaliana 1.3e-27
MLP423
MLP-like protein 423
protein from Arabidopsis thaliana 0.00023

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  030202
        (181 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2043575 - symbol:AT2G25770 "AT2G25770" species...   347  1.3e-31   1
TAIR|locus:2134123 - symbol:AT4G32870 "AT4G32870" species...   309  1.3e-27   1
TAIR|locus:2199932 - symbol:MLP423 "MLP-like protein 423"...   102  0.00023   1


>TAIR|locus:2043575 [details] [associations]
            symbol:AT2G25770 "AT2G25770" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002685 GenomeReviews:CT485783_GR
            Gene3D:3.30.530.20 InterPro:IPR023393 EMBL:AC005395
            InterPro:IPR019587 Pfam:PF10604 EMBL:BT015068 EMBL:BT020343
            IPI:IPI00531225 PIR:E84652 RefSeq:NP_001031416.1 RefSeq:NP_180148.1
            UniGene:At.38976 ProteinModelPortal:O82320 SMR:O82320 PaxDb:O82320
            PRIDE:O82320 DNASU:817119 EnsemblPlants:AT2G25770.1
            EnsemblPlants:AT2G25770.2 GeneID:817119 KEGG:ath:AT2G25770
            TAIR:At2g25770 eggNOG:NOG263839 HOGENOM:HOG000237617
            InParanoid:O82320 OMA:DGCVIEW PhylomeDB:O82320
            ProtClustDB:CLSN2683277 Genevestigator:O82320 Uniprot:O82320
        Length = 167

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 67/166 (40%), Positives = 97/166 (58%)

Query:    10 KQEQP-KWQGRACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQGISGQPGCVRFC 68
             K   P KW  +    LT  K ++IW    DFF L KW PTL TC  + G +G+ GC+RFC
Sbjct:     3 KASSPEKWLAKVSVTLTKAKPDEIWPLFTDFFNLHKWLPTLATCHGVHGNNGEQGCIRFC 62

Query:    69 AGFKTPVDNKDDDHEQSVNWTKQKLLAINAEEMTLTYSIVDGNVGFYGYVSTLTVAPK-E 127
             +GF    +  D     +  W+K+KL+A+N  E  + Y IV+ N GF  YVST+ + P+ E
Sbjct:    63 SGFSIGSNGVDS----AARWSKEKLVAVNPVERVMRYEIVESNTGFESYVSTVKILPRGE 118

Query:   128 NGCYIEWKYEVEPVKGWRLEDLDCFISSGLQVMARRMKE-ALQAYE 172
             +GC IEW + V+PV+G  LE+L       L+++ + M+E AL+  E
Sbjct:   119 DGCVIEWSFTVDPVRGLSLENLVKKYEKALEIITKNMEEDALRRRE 164


>TAIR|locus:2134123 [details] [associations]
            symbol:AT4G32870 "AT4G32870" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002687 GenomeReviews:CT486007_GR
            Gene3D:3.30.530.20 InterPro:IPR023393 EMBL:AL161582
            InterPro:IPR019587 Pfam:PF10604 HOGENOM:HOG000237617 EMBL:BT010918
            EMBL:BT010958 EMBL:AK229022 IPI:IPI00530890 PIR:T10694
            RefSeq:NP_195013.1 UniGene:At.31629 ProteinModelPortal:Q9M073
            SMR:Q9M073 STRING:Q9M073 PaxDb:Q9M073 PRIDE:Q9M073 DNASU:829423
            EnsemblPlants:AT4G32870.1 GeneID:829423 KEGG:ath:AT4G32870
            TAIR:At4g32870 eggNOG:NOG298175 InParanoid:Q9M073 OMA:RIEWSFV
            PhylomeDB:Q9M073 ProtClustDB:CLSN2915854 ArrayExpress:Q9M073
            Genevestigator:Q9M073 Uniprot:Q9M073
        Length = 157

 Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
 Identities = 57/154 (37%), Positives = 91/154 (59%)

Query:    15 KWQGRACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQGISGQPGCVRFCAGFKTP 74
             KW+G+   ++ GV AE++W+   DF  + +WFP++ TC  +QG  G PG +R+C+  KT 
Sbjct:     9 KWEGKKVAQVNGVTAEKVWSVFSDFCNVQEWFPSVDTCYRVQGTDGVPGLIRYCSTTKTK 68

Query:    75 VDNKDDDHEQSVNWTKQKLLAINAEEMTLTYSIVDGNVGFYGYVSTLTVAP---KENGCY 131
                     E+   W K+KL+ I+     L+Y I++ NVGF  YV+T+ V P   ++    
Sbjct:    69 --------EEGSRWAKEKLVKIDPIGRCLSYEILENNVGFRSYVATVQVTPVDGEDQVSR 120

Query:   132 IEWKYEVEPVKGWRLEDLDCFISSGLQVMARRMK 165
             IEW +  +PV GW+ EDL+ ++   LQ MA +M+
Sbjct:   121 IEWSFVADPVDGWKKEDLESYVDFCLQHMANKME 154


>TAIR|locus:2199932 [details] [associations]
            symbol:MLP423 "MLP-like protein 423" species:3702
            "Arabidopsis thaliana" [GO:0006952 "defense response" evidence=IEA]
            [GO:0009507 "chloroplast" evidence=ISM] [GO:0016020 "membrane"
            evidence=IDA] [GO:0016556 "mRNA modification" evidence=RCA]
            InterPro:IPR000916 Pfam:PF00407 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0006952 GO:GO:0016020 GO:GO:0009607
            Gene3D:3.30.530.20 InterPro:IPR023393 EMBL:AC002423
            HOGENOM:HOG000239987 InterPro:IPR024948 SMART:SM01037 EMBL:AJ306136
            EMBL:AY052277 EMBL:AY061912 EMBL:AY088360 IPI:IPI00542532
            RefSeq:NP_001185075.1 RefSeq:NP_173813.1 UniGene:At.25399
            UniGene:At.51746 UniGene:At.74164 ProteinModelPortal:Q93VR4
            SMR:Q93VR4 STRING:Q93VR4 PaxDb:Q93VR4 PRIDE:Q93VR4 ProMEX:Q93VR4
            EnsemblPlants:AT1G24020.1 EnsemblPlants:AT1G24020.2 GeneID:839014
            KEGG:ath:AT1G24020 TAIR:At1g24020 eggNOG:NOG277848
            InParanoid:Q93VR4 OMA:TYGEGSP PhylomeDB:Q93VR4
            ProtClustDB:CLSN2682365 Genevestigator:Q93VR4 GermOnline:AT1G24020
            InterPro:IPR024949 PRINTS:PR00634 Uniprot:Q93VR4
        Length = 155

 Score = 102 (41.0 bits), Expect = 0.00023, P = 0.00023
 Identities = 33/116 (28%), Positives = 55/116 (47%)

Query:    29 AEQIWAFLEDFFGL-DKWFPT-LTTCIPIQGISGQPGCVRFCA-GFKTPVDNKDDDHEQS 85
             AE+ W  L D   L  K FP    T   + G    PG +R    G  +P+          
Sbjct:    17 AEKFWVALGDGINLFPKAFPNDYKTIQVLAGDGNAPGSIRLITYGEGSPL---------- 66

Query:    86 VNWTKQKLLAINAEEMTLTYSIVDGNV-GFYG-YVSTLTVAPKENGCYIEWKYEVE 139
             V  + +++ A++ E  +++YSI+ G +  +Y  +  T+TV PK+ G  ++W  E E
Sbjct:    67 VKISAERIEAVDLENKSMSYSIIGGEMLEYYKTFKGTITVIPKDGGSLLKWSGEFE 122


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.135   0.434    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      181       181   0.00095  109 3  11 22  0.44    32
                                                     31  0.40    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  615 (65 KB)
  Total size of DFA:  199 KB (2111 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.32u 0.15s 16.47t   Elapsed:  00:00:01
  Total cpu time:  16.32u 0.15s 16.47t   Elapsed:  00:00:01
  Start:  Fri May 10 13:10:43 2013   End:  Fri May 10 13:10:44 2013

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