Query 030202
Match_columns 181
No_of_seqs 134 out of 1022
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 16:16:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030202.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030202hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rt2_A Abscisic acid receptor 100.0 4.8E-30 1.6E-34 201.3 21.7 154 6-171 16-178 (183)
2 3jrs_A PYL1, putative uncharac 100.0 6.9E-29 2.4E-33 198.0 20.2 151 7-168 44-206 (208)
3 3k3k_A Abscisic acid receptor 100.0 1.9E-28 6.3E-33 195.8 20.0 153 7-171 40-202 (211)
4 2i9y_A Major latex protein-lik 100.0 1.4E-28 4.7E-33 190.2 16.3 155 4-171 3-165 (166)
5 3f08_A Uncharacterized protein 100.0 5.1E-28 1.7E-32 183.1 18.3 130 18-167 4-139 (146)
6 3kl1_A PYL2, putative uncharac 100.0 2.4E-27 8.3E-32 187.0 20.5 152 7-170 25-187 (190)
7 3oqu_A Abscisic acid receptor 100.0 3.6E-27 1.2E-31 187.6 21.6 144 14-170 50-201 (205)
8 3oji_A Abscisic acid receptor 100.0 2.3E-27 7.9E-32 186.2 20.1 151 6-166 19-186 (189)
9 3p51_A Uncharacterized protein 100.0 8.2E-28 2.8E-32 184.8 16.5 131 18-167 4-143 (160)
10 2flh_A Cytokinin-specific bind 99.9 1.3E-26 4.4E-31 177.3 17.1 139 19-171 6-153 (155)
11 2vjg_A Major allergen DAU C 1; 99.9 3.6E-26 1.2E-30 174.8 18.9 138 19-170 7-153 (154)
12 3rws_A MTN13 protein; zeatin, 99.9 4.7E-26 1.6E-30 176.4 18.8 139 18-171 11-160 (168)
13 4a8u_A Major pollen allergen B 99.9 7.4E-26 2.5E-30 173.8 18.6 140 19-171 6-154 (159)
14 1e09_A PRU AV 1; allergen, maj 99.9 5.5E-26 1.9E-30 174.3 17.7 140 19-171 6-154 (159)
15 1tw0_A Pathogenesis-related cl 99.9 1.9E-25 6.7E-30 171.0 19.7 140 19-171 6-153 (157)
16 3ie5_A Phenolic oxidative coup 99.9 1.6E-25 5.4E-30 173.0 18.3 140 19-171 13-160 (165)
17 3qrz_A Abscisic acid receptor 99.9 1.5E-28 5.2E-33 197.7 1.2 150 6-166 67-222 (223)
18 1icx_A Protein LLR18A, LLPR10. 99.9 1.3E-25 4.4E-30 171.6 16.2 141 19-171 6-152 (155)
19 2qim_A PR10.2B; trans-zeatin, 99.9 2.1E-25 7.1E-30 170.9 16.8 140 19-171 7-154 (158)
20 2vq5_A S-norcoclaurine synthas 99.9 3.8E-25 1.3E-29 175.7 14.6 137 20-171 33-179 (201)
21 2le1_A Uncharacterized protein 99.9 5.4E-25 1.9E-29 165.7 14.6 135 18-166 4-143 (151)
22 2wql_A Major allergen DAU C 1; 99.9 9E-24 3.1E-28 161.5 19.0 139 19-170 7-153 (154)
23 3tvq_A Multifunctional cyclase 99.8 5.1E-17 1.7E-21 125.5 18.3 140 18-171 5-151 (169)
24 3tl1_A WHIE ORF VI, polyketide 99.7 1.6E-16 5.4E-21 121.6 18.1 139 18-170 5-150 (159)
25 2d4r_A Hypothetical protein TT 99.7 4.7E-16 1.6E-20 113.2 16.2 137 18-170 4-144 (147)
26 3tfz_A Cyclase; helix-GRIP, BE 99.7 8.6E-16 2.9E-20 118.1 17.7 137 18-168 7-161 (172)
27 3ijt_A SMU.440, putative uncha 99.7 1.4E-15 4.7E-20 115.8 15.8 134 14-168 16-152 (155)
28 1vjh_A BET V I allergen family 99.7 3.5E-15 1.2E-19 109.4 16.0 107 19-171 8-120 (122)
29 1t17_A Conserved hypothetical 99.6 2.4E-14 8.1E-19 106.8 14.9 138 18-169 4-143 (148)
30 2pcs_A Conserved protein; stru 99.5 1.5E-13 5.1E-18 103.5 11.4 144 18-177 5-159 (162)
31 3ggn_A Uncharacterized protein 99.5 3.6E-12 1.2E-16 96.0 15.9 107 19-143 7-115 (155)
32 2ns9_A Hypothetical protein AP 99.4 1.2E-11 4E-16 92.1 17.7 136 19-171 16-157 (157)
33 3p9v_A Uncharacterized protein 99.3 6.9E-11 2.4E-15 89.7 14.3 139 18-170 9-151 (161)
34 2leq_A Uncharacterized protein 99.2 6.7E-10 2.3E-14 81.1 14.9 133 17-171 6-143 (146)
35 1z94_A Conserved hypothetical 99.2 8E-10 2.7E-14 81.0 15.0 135 19-169 6-142 (147)
36 2qpv_A Uncharacterized protein 99.1 1.4E-09 4.8E-14 82.7 13.7 121 17-165 28-154 (156)
37 3q64_A MLL3774 protein; struct 99.1 7.2E-09 2.5E-13 78.3 17.3 136 19-167 12-153 (162)
38 2lcg_A Uncharacterized protein 99.1 2.6E-09 8.9E-14 78.7 14.5 129 19-171 4-134 (142)
39 1xuv_A Hypothetical protein MM 99.1 4.8E-09 1.6E-13 80.4 16.5 146 16-176 22-173 (178)
40 2lak_A AHSA1-like protein RHE_ 99.1 5.4E-10 1.8E-14 84.1 10.0 128 17-171 10-141 (160)
41 1xn6_A Hypothetical protein BC 99.1 1.9E-09 6.4E-14 79.4 11.9 125 17-169 9-142 (143)
42 3rd6_A MLL3558 protein; struct 99.1 1.1E-08 3.7E-13 77.3 15.8 135 19-166 11-151 (161)
43 2il5_A Hypothetical protein; s 99.1 1.1E-08 3.8E-13 77.4 15.8 143 17-171 15-168 (171)
44 3q6a_A Uncharacterized protein 99.0 9.3E-09 3.2E-13 75.1 14.4 123 19-171 4-126 (135)
45 3q63_A MLL2253 protein; struct 99.0 1.2E-08 4.1E-13 76.3 14.8 133 19-176 12-147 (151)
46 2lgh_A Uncharacterized protein 99.0 1.2E-08 4.2E-13 75.6 14.6 128 19-170 4-134 (144)
47 1xn5_A BH1534 unknown conserve 99.0 6.4E-09 2.2E-13 77.1 12.8 124 18-169 7-138 (146)
48 2l8o_A Uncharacterized protein 99.0 1.2E-08 4.1E-13 75.7 14.0 128 19-170 5-135 (144)
49 3put_A Hypothetical conserved 99.0 3.3E-08 1.1E-12 75.1 16.4 138 19-176 12-158 (166)
50 2ldk_A Uncharacterized protein 99.0 3.5E-08 1.2E-12 74.8 15.9 141 17-172 13-162 (172)
51 1xfs_A NC_840354, conserved hy 99.0 2.4E-08 8.3E-13 76.2 15.0 138 17-171 11-167 (178)
52 2nn5_A Hypothetical protein EF 99.0 2.5E-08 8.5E-13 77.4 14.9 123 17-173 37-161 (184)
53 2lf2_A Uncharacterized protein 98.9 2E-08 6.8E-13 76.8 13.0 142 17-176 17-170 (175)
54 3eli_A AHSA1, AHA1 domain prot 98.9 4.1E-08 1.4E-12 73.1 14.0 133 19-169 5-144 (152)
55 2kew_A Uncharacterized protein 98.9 2.9E-09 1E-13 79.6 7.6 129 17-173 11-147 (152)
56 3pu2_A Uncharacterized protein 98.9 5.3E-08 1.8E-12 73.8 14.7 140 17-172 14-158 (164)
57 2l9p_A Uncharacterized protein 98.9 2.9E-08 1E-12 74.9 11.5 136 19-170 11-155 (164)
58 3uid_A Putative uncharacterize 98.8 6.8E-08 2.3E-12 73.6 12.6 139 18-171 15-162 (168)
59 2k5g_A Uncharacterized protein 98.7 2.5E-07 8.7E-12 71.8 11.7 130 17-170 20-162 (191)
60 1x53_A Activator of 90 kDa hea 98.7 2.2E-08 7.5E-13 74.0 5.2 125 18-172 13-139 (145)
61 3qsz_A STAR-related lipid tran 98.6 4.9E-06 1.7E-10 63.8 17.1 141 18-171 29-180 (189)
62 3ni8_A PFC0360W protein; heat 98.6 6.8E-07 2.3E-11 67.6 11.3 129 18-170 21-154 (158)
63 4fpw_A CALU16; structural geno 98.6 3.5E-07 1.2E-11 70.9 9.6 116 19-168 24-139 (181)
64 2luz_A CALU16; structural geno 98.5 4.2E-06 1.4E-10 65.4 13.2 116 20-169 36-151 (192)
65 1zxf_A CALC; SELF-sacrificing 98.4 2.6E-06 8.8E-11 63.8 10.8 129 19-168 7-148 (155)
66 3oh8_A Nucleoside-diphosphate 98.4 3.4E-06 1.2E-10 74.5 12.8 128 20-167 5-136 (516)
67 1ln1_A PC-TP, phosphatidylchol 98.0 0.00045 1.6E-08 53.6 16.5 140 19-171 55-210 (214)
68 1jss_A Stard4, cholesterol-reg 97.5 0.0096 3.3E-07 46.7 16.1 143 19-171 70-224 (224)
69 3p0l_A Steroidogenic acute reg 97.3 0.013 4.4E-07 45.8 15.2 141 19-169 58-213 (221)
70 2r55_A STAR-related lipid tran 97.2 0.035 1.2E-06 43.4 17.0 143 18-171 69-229 (231)
71 1em2_A MLN64 protein; beta bar 97.2 0.023 7.7E-07 44.5 15.1 142 19-170 69-225 (229)
72 2lio_A Uncharacterized protein 97.1 0.026 9E-07 41.4 13.9 117 20-169 8-127 (136)
73 2e3n_A Lipid-transfer protein 96.9 0.034 1.2E-06 44.2 13.8 36 21-56 78-113 (255)
74 2pso_A STAR-related lipid tran 96.5 0.052 1.8E-06 43.1 12.1 136 19-168 78-225 (237)
75 3fo5_A Thioesterase, adipose a 96.2 0.09 3.1E-06 42.5 12.3 112 19-140 91-216 (258)
76 2ffs_A Hypothetical protein PA 94.8 0.88 3E-05 34.1 16.7 126 27-171 20-152 (157)
77 2l5r_A Antimicrobial peptide a 49.5 21 0.00072 17.8 2.9 22 149-170 2-23 (26)
78 2iqi_A Hypothetical protein XC 29.1 1.7E+02 0.0057 21.3 9.5 53 117-169 124-178 (192)
79 1kmt_A RHO GDP-dissociation in 21.7 2.3E+02 0.0078 20.3 6.6 54 87-140 77-135 (141)
80 1doa_B RHO GDI 1, protein (GDP 20.4 3E+02 0.01 21.3 6.9 53 88-140 156-213 (219)
No 1
>3rt2_A Abscisic acid receptor PYL10; ABA-independent PP2C inhibitor, PP2CS, hydrolase inhibitor; 1.50A {Arabidopsis thaliana} PDB: 3r6p_A* 3qtj_A* 3uqh_A 3rt0_C
Probab=99.97 E-value=4.8e-30 Score=201.29 Aligned_cols=154 Identities=18% Similarity=0.263 Sum_probs=129.5
Q ss_pred CCCCCCCCCCeeeE-EEEEEeCCCHHHHHHHHhccCCcccccccceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcC
Q 030202 6 DHHGKQEQPKWQGR-ACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQ 84 (181)
Q Consensus 6 ~~~~~~~~~~w~~~-v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~ 84 (181)
.||+..-.|.=+.+ +..+| +||+++||++++||+++++|+|.|.+| .++|+++++|++|.+++. + | .+
T Consensus 16 ~~~~~~~~~~~~~~~v~~~I-~Apa~~VW~~v~df~~l~~w~P~V~s~-~~eG~~ggvGsvR~lt~~----~---G--~p 84 (183)
T 3rt2_A 16 KHHRHELVESQCSSTLVKHI-KAPLHLVWSIVRRFDEPQKYKPFISRC-VVQGKKLEVGSVREVDLK----S---G--LP 84 (183)
T ss_dssp HHSCCCCSTTEEEEEEEEEE-SSCHHHHHHHHTCTTCGGGTCTTEEEE-EESSSCCCTTCEEEEEEC----C---S--ST
T ss_pred HhhccCCCCCceEEEEEEEE-eCCHHHHHHHHhCcCchhhcCccceEE-EeeCCCCCCCcEEEEEeC----C---C--Cc
Confidence 36766665554544 46777 999999999999999999999999999 567877899999999972 2 3 22
Q ss_pred ccceEEEEEEEEecCCCeEEEEEeecccceeeEEEEEEEEEcC-C---ceEEEEEEEEeeCCCCCHHHH----HHHHHHH
Q 030202 85 SVNWTKQKLLAINAEEMTLTYSIVDGNVGFYGYVSTLTVAPKE-N---GCYIEWKYEVEPVKGWRLEDL----DCFISSG 156 (181)
Q Consensus 85 ~~~~~~Erl~~~D~~~~~~~y~v~~g~~p~~~~~~t~~v~p~~-~---gT~v~W~~~~~p~~~~~~~~~----~~~~~~g 156 (181)
...++|||+++|+++|+|+|+|++|++|+++|.++++|.|.+ + ||+|+|+++|+|.++...+.+ ..+|+.+
T Consensus 85 -~~~vkErL~~~D~~~~~~sY~Iieg~lp~~~y~ati~v~p~~~dG~~gt~V~Ws~~fd~~~g~~~e~~~~~~~~i~~~~ 163 (183)
T 3rt2_A 85 -ATKSTEVLEILDDNEHILGIRIVGGDHRLKNYSSTISLHSETIDGKTGTLAIESFVVDVPEGNTKEETCFFVEALIQCN 163 (183)
T ss_dssp -TCEEEEEEEEEETTTTEEEEEEEEESCSCTTCEEEEEEEEEEETTEEEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred -cceEEEEEEEEECCCCEEEEEEecCCcceeEEEEEEEEEEecCCCCCCEEEEEEEEEEcCCCCCHHHHHHHHHHHHHHH
Confidence 358999999999999999999999999999999999999975 4 599999999998777766554 5789999
Q ss_pred HHHHHHHHHHHHhhh
Q 030202 157 LQVMARRMKEALQAY 171 (181)
Q Consensus 157 l~~l~~~le~~~~~~ 171 (181)
|++|++.+|+.+.++
T Consensus 164 L~~L~~~~e~~~~~~ 178 (183)
T 3rt2_A 164 LNSLADVTERLQAES 178 (183)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhhc
Confidence 999999999977543
No 2
>3jrs_A PYL1, putative uncharacterized protein AT5G46790; plant hormone receptor, abscisic acid, hormone recepto; HET: A8S; 2.05A {Arabidopsis thaliana}
Probab=99.97 E-value=6.9e-29 Score=197.96 Aligned_cols=151 Identities=19% Similarity=0.228 Sum_probs=121.6
Q ss_pred CCCCCCCCC-eeeEEEEEEeCCCHHHHHHHHhccCCcccccccceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCc
Q 030202 7 HHGKQEQPK-WQGRACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQS 85 (181)
Q Consensus 7 ~~~~~~~~~-w~~~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~ 85 (181)
||+..-.|. =...+..+| +||+++||++++||+++++|.|.|.+|++.+|+++++|++|.+++. +| .+
T Consensus 44 ~~~h~~~~~~c~~~v~~~I-~ApadkVW~lv~Df~~l~~w~p~V~s~e~~eGd~g~vGsVR~lt~~----~G-----~p- 112 (208)
T 3jrs_A 44 FHTYQLGNGRCSSLLAQRI-HAPPETVWSVVRRFDRPQIYKHFIKSCNVSEDFEMRVGCTRDVNVI----SG-----LP- 112 (208)
T ss_dssp HSCCCCCTTEEEEEEEEEE-SSCHHHHHHHHTCTTCGGGTCTTEEEEECCTTCCCSTTCEEEEEEC----TT-----SS-
T ss_pred HhccCCCCCeEeEEEEEEE-eCCHHHHHHHHhCcCChhHccccceEEEEecCCCCCCCeEEEEEec----CC-----Cc-
Confidence 555544444 444556778 9999999999999999999999999999888877899999999972 22 12
Q ss_pred cceEEEEEEEEecCCCeEEEEEeecccceeeEEEEEEEEEcC--CceEEEEEEEEe-----eCCCCCHHHH----HHHHH
Q 030202 86 VNWTKQKLLAINAEEMTLTYSIVDGNVGFYGYVSTLTVAPKE--NGCYIEWKYEVE-----PVKGWRLEDL----DCFIS 154 (181)
Q Consensus 86 ~~~~~Erl~~~D~~~~~~~y~v~~g~~p~~~~~~t~~v~p~~--~gT~v~W~~~~~-----p~~~~~~~~~----~~~~~ 154 (181)
...++|||+++|+++++|+|+|++|++|+++|.++++|.|.+ ++|+|+|+.+|+ |..+...+.+ ..+|+
T Consensus 113 ~~~vkErL~~lDde~~~~sYsIieG~lpv~~Y~sti~V~p~~~g~~t~V~Wt~~fes~~~D~p~g~~~e~a~~~~~~vy~ 192 (208)
T 3jrs_A 113 ANTSRERLDLLDDDRRVTGFSITGGEHRLRNYKSVTTVHRFEKEEEEERIWTVVLESYVVDVPEGNSEEDTRLFADTVIR 192 (208)
T ss_dssp CCEEEEEEEEEETTTTEEEEEEEESSSSCTTCEEEEEEEEEEC-----CEEEEEEEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred cceEEEEEEEEeccCCEEEEEEeeCCcceeeEEEEEEEEEccCCCccEEEEEEEEEEccCCCCCCCCHHHHHHHHHHHHH
Confidence 348999999999999999999999999999999999999963 479999999997 3445555444 35899
Q ss_pred HHHHHHHHHHHHHH
Q 030202 155 SGLQVMARRMKEAL 168 (181)
Q Consensus 155 ~gl~~l~~~le~~~ 168 (181)
.||++|++.+|+.+
T Consensus 193 ~gL~~L~~~~e~~~ 206 (208)
T 3jrs_A 193 LNLQKLASITEAMN 206 (208)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhhc
Confidence 99999999999853
No 3
>3k3k_A Abscisic acid receptor PYR1; ABA receptor, plant hormone receptor, A sensor, drought tolerance, plant development; HET: A8S; 1.70A {Arabidopsis thaliana} PDB: 3njo_A* 3qn1_A* 3k90_A* 3zvu_A* 3jrq_B* 3kdj_A* 3nef_A* 3neg_A* 3nmn_A* 3kay_A*
Probab=99.96 E-value=1.9e-28 Score=195.77 Aligned_cols=153 Identities=19% Similarity=0.230 Sum_probs=124.6
Q ss_pred CCCCCCCCCeee-EEEEEEeCCCHHHHHHHHhccCCcccccccceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCc
Q 030202 7 HHGKQEQPKWQG-RACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQS 85 (181)
Q Consensus 7 ~~~~~~~~~w~~-~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~ 85 (181)
||+..-.|.=+. .+..+| +||+++||++++||++++.|.|.|.+|++.+|+++++|++|.+++. + | .+
T Consensus 40 ~~~h~~~~~~c~~~v~~~I-~ApadkVW~lv~dF~~l~~w~p~V~s~e~~eGd~g~vGsVR~lt~~----~---G--~p- 108 (211)
T 3k3k_A 40 FHTYQLDPGSCSSLHAQRI-HAPPELVWSIVRRFDKPQTYKHFIKSCSVEQNFEMRVGCTRDVIVI----S---G--LP- 108 (211)
T ss_dssp HSCCCCCTTEEEEEEEEEE-SSCHHHHHHHHTCTTCGGGTCSSEEEEECCTTCCCCTTCEEEEEES----S---S--SS-
T ss_pred HhccCCCCCeEeEEEEEEE-cCCHHHHHHHHhCcCChhHcCccceEEEEecCCCCCCCcEEEEEec----C---C--Cc-
Confidence 555544444444 446777 9999999999999999999999999999888877799999999972 2 3 22
Q ss_pred cceEEEEEEEEecCCCeEEEEEeecccceeeEEEEEEEEEcCCceEEEEEEEEee-----CCCC----CHHHHHHHHHHH
Q 030202 86 VNWTKQKLLAINAEEMTLTYSIVDGNVGFYGYVSTLTVAPKENGCYIEWKYEVEP-----VKGW----RLEDLDCFISSG 156 (181)
Q Consensus 86 ~~~~~Erl~~~D~~~~~~~y~v~~g~~p~~~~~~t~~v~p~~~gT~v~W~~~~~p-----~~~~----~~~~~~~~~~~g 156 (181)
...++|||+++|+++++|+|+|++|++|+++|.++++|.|.++|+ |+|+.+|+. ..+. ....+..+|+.+
T Consensus 109 ~~~vkErL~~lDd~~~~~sYsIieg~lpv~~Y~sti~V~p~~~gg-V~Wt~~fes~~~D~P~g~~~e~a~~~v~~iy~~g 187 (211)
T 3k3k_A 109 ANTSTERLDILDDERRVTGFSIIGGEHRLTNYKSVTTVHRFEKEN-RIWTVVLESYVVDMPEGNSEDDTRMFADTVVKLN 187 (211)
T ss_dssp CEEEEEEEEEEETTTTEEEEEEEEETTGGGTCEEEEEEEEEEETT-EEEEEEEEEEEEECCSSSSSSCCHHHHHHHHHHH
T ss_pred cceEEEEEEEEeccCCEEEEEEeecCcceeEEEEEEEEEECCCCC-EEEEEEEEEecCCCCCCCCHHHHHHHHHHHHHHH
Confidence 358999999999999999999999999999999999999998766 999999972 2232 223335689999
Q ss_pred HHHHHHHHHHHHhhh
Q 030202 157 LQVMARRMKEALQAY 171 (181)
Q Consensus 157 l~~l~~~le~~~~~~ 171 (181)
|++|++.+|+.+..+
T Consensus 188 L~~L~~~~e~~~~~~ 202 (211)
T 3k3k_A 188 LQKLATVAEAMARNS 202 (211)
T ss_dssp HHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhhhhc
Confidence 999999999975443
No 4
>2i9y_A Major latex protein-like protein 28 or MLP-like protein 28; AT1G70830, BET V1-like, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana}
Probab=99.96 E-value=1.4e-28 Score=190.20 Aligned_cols=155 Identities=18% Similarity=0.336 Sum_probs=124.6
Q ss_pred CCCCCCCCCCCCeeeEE--EEEEeCCCHHHHHHHH-hccCCcccccc-cceeEEEecCCCCCCceEEEEeeeecCCCCCC
Q 030202 4 NDDHHGKQEQPKWQGRA--CEELTGVKAEQIWAFL-EDFFGLDKWFP-TLTTCIPIQGISGQPGCVRFCAGFKTPVDNKD 79 (181)
Q Consensus 4 ~~~~~~~~~~~~w~~~v--~~~I~~Ap~e~VW~~l-~Df~~~~~w~P-~v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~ 79 (181)
...||-.++..+|.+++ +++| +|||++||+++ .||..+|+|+| .|.+|++++|+++++|++|.+++. .|
T Consensus 3 ~~~~~~~~~~~~~~~k~~~ev~i-~apa~kvw~~~~~d~~~lpk~~P~~i~s~~~~eGd~gg~Gsir~~~~~----~g-- 75 (166)
T 2i9y_A 3 HHHHHLETEASSLVGKLETDVEI-KASADKFHHMFAGKPHHVSKASPGNIQGCDLHEGDWGTVGSIVFWNYV----HD-- 75 (166)
T ss_dssp -------CCCSSSEEEEEEEEEE-SSCHHHHHGGGSSCSSCCCCSCSSCCSSCCCCSCCSCSTTCCCEEEEE----ET--
T ss_pred cccccccccccCCccEEEEEEEe-cCCHHHHHHHHhcccccccccccccceEEEEEcCCCCCCCeEEEEEEe----cC--
Confidence 35677888899999996 6677 99999999995 59999999999 889999888876889999999983 22
Q ss_pred CCCcCccceEEEEEEEEecCCCeEEEEEeeccc--ceeeEEEEEEEEEc--CCceEEEEEEEEeeCCCCCHHHHHHHHHH
Q 030202 80 DDHEQSVNWTKQKLLAINAEEMTLTYSIVDGNV--GFYGYVSTLTVAPK--ENGCYIEWKYEVEPVKGWRLEDLDCFISS 155 (181)
Q Consensus 80 G~~~~~~~~~~Erl~~~D~~~~~~~y~v~~g~~--p~~~~~~t~~v~p~--~~gT~v~W~~~~~p~~~~~~~~~~~~~~~ 155 (181)
| ....++|||+.+|+++++++|++++|++ +++.|.++++|.|. ++||+|+|+++|++..+..++. .. +..
T Consensus 76 g----~~~~~kErl~~iD~~~~~~~y~iieGd~~~~~~~~~~ti~v~p~~~g~gs~v~wt~~ye~~~~~~~~p-~~-~~~ 149 (166)
T 2i9y_A 76 G----EAKVAKERIEAVEPDKNLITFRVIEGDLMKEYKSFLLTIQVTPKPGGPGSIVHWHLEYEKISEEVAHP-ET-LLQ 149 (166)
T ss_dssp T----EEEEEEEEEEEEETTTTEEEEEECCTTGGGTEEEEEEEEEEEEEEETTEEEEEEEEEEEESSTTTCCT-HH-HHH
T ss_pred C----CceEEEEEEEEEeccCcEEEEEEEeCCCCCCeeEEEEEEEEEECCCCCCcEEEEEEEEEECCCCCCCH-HH-HHH
Confidence 3 1348999999999999999999999986 58999999999998 4589999999999875433322 12 446
Q ss_pred HHHHHHHHHHHHHhhh
Q 030202 156 GLQVMARRMKEALQAY 171 (181)
Q Consensus 156 gl~~l~~~le~~~~~~ 171 (181)
.+..|.+.|+++++++
T Consensus 150 ~~~~~~k~ie~~l~~~ 165 (166)
T 2i9y_A 150 FCVEVSKEIDEHLLAE 165 (166)
T ss_dssp HHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHhhC
Confidence 7889999999999875
No 5
>3f08_A Uncharacterized protein Q6HG14; NESG Q6HG14_bachk Q6HG14 BUR153, structural genomics, PSI-2; 2.20A {Bacillus thuringiensis serovar konkukiorganism_taxid} SCOP: d.129.3.8 PDB: 3cnw_A
Probab=99.96 E-value=5.1e-28 Score=183.08 Aligned_cols=130 Identities=28% Similarity=0.471 Sum_probs=110.9
Q ss_pred eEEEEEEeCCCHHHHHHHHhccCCcccccccceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCccceEEEEEEEEe
Q 030202 18 GRACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLAIN 97 (181)
Q Consensus 18 ~~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~~D 97 (181)
-..+++| +|||++||++++||+++++|+|.+.+|++.+| |++|.+++ . + | .+++|||+++|
T Consensus 4 v~~si~I-~Ap~~~VW~~l~d~~~~~~w~p~v~~~~~~~G-----G~vR~~~~---~-~---G------~~~~Erl~~~D 64 (146)
T 3f08_A 4 TTTSMEI-FGSTEQVWQLIGGFNSLPDWLPYIPSSKLTEG-----GRVRHLAN---P-D---G------ETIIERLEVFN 64 (146)
T ss_dssp EEEEEEE-SSCHHHHHHHHCSTTCHHHHCTTCCEEEEEGG-----GTEEEEEC---T-T---S------CEEEEEEEEEE
T ss_pred EEEEEEE-eCCHHHHHHHHhccccHHHhCCCeEEEEEeCC-----CeEEEEEe---C-C---C------CEEEEEEEEEe
Confidence 4578999 99999999999999999999999999998765 89999986 1 2 3 28999999999
Q ss_pred cCCCeEEEEEeecccceeeEEEEEEEEE-cC-CceEEEEEEEEeeCCCCCHHH----HHHHHHHHHHHHHHHHHHH
Q 030202 98 AEEMTLTYSIVDGNVGFYGYVSTLTVAP-KE-NGCYIEWKYEVEPVKGWRLED----LDCFISSGLQVMARRMKEA 167 (181)
Q Consensus 98 ~~~~~~~y~v~~g~~p~~~~~~t~~v~p-~~-~gT~v~W~~~~~p~~~~~~~~----~~~~~~~gl~~l~~~le~~ 167 (181)
+++++++|++++|++|+++|.++++|.| .+ +||+|+|+++|+|. +...+. +..+|+.||++|++.+|..
T Consensus 65 ~~~~~~~y~iv~g~~~~~~~~~~~~v~p~~~~~gt~v~w~~~~~p~-g~~~~~~~~~~~~~~~~~L~~Lk~~~e~~ 139 (146)
T 3f08_A 65 DKERYYTYSIMNAPFPVTNYLSTIQVKEGTESNTSLVEWSGTFTPV-AVSDEEAINLVHGIYSDGLKALQHAFLDL 139 (146)
T ss_dssp TTTTEEEEEEEECSSSEEEEEEEEEEEECSSTTCEEEEEEEEEEES-SSCHHHHHHHHHHHHHHHHHHHHHHTTC-
T ss_pred CCCCEEEEEEecCCCceeEEEEEEEEEEecCCCcEEEEEEEEEEeC-CCCHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999 34 57999999999994 444433 3578888888888887753
No 6
>3kl1_A PYL2, putative uncharacterized protein AT2G26040; abscisic acid receptor, crystal, high resolution, PP2C, HORM receptor; 1.55A {Arabidopsis thaliana} PDB: 3kdi_A* 3kdh_A 3nr4_A* 3ns2_A* 3nj0_A* 3nj1_A* 3nmh_A* 3kaz_A 3kb0_A* 3kb3_A* 3ujl_A* 3nmp_A* 3nmt_A* 3nmv_A*
Probab=99.96 E-value=2.4e-27 Score=186.95 Aligned_cols=152 Identities=18% Similarity=0.253 Sum_probs=125.6
Q ss_pred CCCCCCCCCeeeE-EEEEEeCCCHHHHHHHHhccCCcccccccceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCc
Q 030202 7 HHGKQEQPKWQGR-ACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQS 85 (181)
Q Consensus 7 ~~~~~~~~~w~~~-v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~ 85 (181)
||+..-.|.=+.+ +..+| +||+++||++++||++...|.|.|.+|++.+|+ +++|++|.+++. + | .+
T Consensus 25 ~~~h~~~~~~~~~~~~~~I-~Apa~~vW~lv~df~~~~~w~p~I~s~e~~eGd-g~vGsVR~~t~~----~---G--~p- 92 (190)
T 3kl1_A 25 YHQFEPDPTTCTSLITQRI-HAPASVVWPLIRRFDNPERYKHFVKRCRLISGD-GDVGSVREVTVI----S---G--LP- 92 (190)
T ss_dssp HSCCCCCTTEEEEEEEEEE-SSCHHHHHHHHHCTTCGGGTCSSEEEEEEEESS-SSTTCEEEEEEC----S---S--SS-
T ss_pred HhccCCCCCceeEEEEEEe-cCCHHHHHHHHhCCCChhHcccccCEEEEEcCC-CCCCeEEEEEec----C---C--Cc-
Confidence 5665555554444 46778 999999999999999988888999999998886 679999999972 2 3 12
Q ss_pred cceEEEEEEEEecCCCeEEEEEeecccceeeEEEEEEEEEc-----CC-ceEEEEEEEEeeCCCCCHHHH----HHHHHH
Q 030202 86 VNWTKQKLLAINAEEMTLTYSIVDGNVGFYGYVSTLTVAPK-----EN-GCYIEWKYEVEPVKGWRLEDL----DCFISS 155 (181)
Q Consensus 86 ~~~~~Erl~~~D~~~~~~~y~v~~g~~p~~~~~~t~~v~p~-----~~-gT~v~W~~~~~p~~~~~~~~~----~~~~~~ 155 (181)
...++|||+++|+++++|+|++++|++|++.|.+++++.+. ++ ||+|+|+++|+|..|...+.+ ..+|+.
T Consensus 93 ~~~vkErL~~iD~~~~~~sY~iieG~~~~~~Y~s~~~v~~~~~~~~~~~gt~V~Ws~~f~~p~g~~~e~~~~~~~~~~~~ 172 (190)
T 3kl1_A 93 ASTSTERLEFVDDDHRVLSFRVVGGEHRLKNYKSVTSVNEFLNQDSGKVYTVVLESYTVDIPEGNTEEDTKMFVDTVVKL 172 (190)
T ss_dssp CEEEEEEEEEEETTTTEEEEEEEEESSSCCSCEEEEEEEEEEC-CCCCEEEEEEEEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred cceEEEEEEEEeccCCEEEEEEEecCCccccEEEEEEEEecccccCCCCcEEEEEEEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 35899999999999999999999999999999999999984 44 699999999997777665444 578999
Q ss_pred HHHHHHHHHHHHHhh
Q 030202 156 GLQVMARRMKEALQA 170 (181)
Q Consensus 156 gl~~l~~~le~~~~~ 170 (181)
+|++|++.+|+.+..
T Consensus 173 gL~~L~~~~e~~~~~ 187 (190)
T 3kl1_A 173 NLQKLGVAATSAPMH 187 (190)
T ss_dssp HHHHHHHHHHHSCC-
T ss_pred HHHHHHHHHhccccc
Confidence 999999999986543
No 7
>3oqu_A Abscisic acid receptor PYL9; RCAR1, hormone receptor; HET: A8S; 2.68A {Arabidopsis thaliana}
Probab=99.96 E-value=3.6e-27 Score=187.57 Aligned_cols=144 Identities=18% Similarity=0.286 Sum_probs=122.9
Q ss_pred CCeeeEEEEEEeCCCHHHHHHHHhccCCcccccccceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCccceEEEEE
Q 030202 14 PKWQGRACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKL 93 (181)
Q Consensus 14 ~~w~~~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl 93 (181)
.+=...+..+| +|||++||++++||+++++|.|.|.+|++ +|+ +++|++|.+++. + | .+ ...++|||
T Consensus 50 ~k~~~~V~~~I-~ApadkVW~lV~Df~~l~kW~P~V~s~ev-eGd-g~vGsVR~vt~~----~---G--~p-~~~vkErL 116 (205)
T 3oqu_A 50 NQCTSALVKHI-KAPLHLVWSLVRRFDQPQKYKPFVSRCTV-IGD-PEIGSLREVNVK----S---G--LP-ATTSTERL 116 (205)
T ss_dssp TEEEEEEEEEE-SSCHHHHHHHHTCTTCGGGTCTTEEEEEC-CSS-CCTTCEEEEEEC----T---T--SS-CSEEEEEE
T ss_pred cEEEEEEeeEE-cCCHHHHHHHHhCcCChhHcCccceEEEe-eCC-CCCCcEEEEEEc----C---C--Cc-cceEEEEE
Confidence 44445555588 99999999999999999999999999974 664 689999999972 2 3 22 35899999
Q ss_pred EEEecCCCeEEEEEeecccceeeEEEEEEEEEcC-C---ceEEEEEEEEeeCCCCCHHHH----HHHHHHHHHHHHHHHH
Q 030202 94 LAINAEEMTLTYSIVDGNVGFYGYVSTLTVAPKE-N---GCYIEWKYEVEPVKGWRLEDL----DCFISSGLQVMARRMK 165 (181)
Q Consensus 94 ~~~D~~~~~~~y~v~~g~~p~~~~~~t~~v~p~~-~---gT~v~W~~~~~p~~~~~~~~~----~~~~~~gl~~l~~~le 165 (181)
+++|+++++|+|+|++|++|+++|.++++|.|.+ + +|.+.|++.++|+.+...+.+ ..+|+.+|+.|++..|
T Consensus 117 ~~lDde~~~~sYsIieG~lpv~~Y~ati~V~p~~~dG~~~T~v~ws~~~D~p~g~t~e~~~~~v~~v~~~gL~~L~~~~e 196 (205)
T 3oqu_A 117 ELLDDEEHILGIKIIGGDHRLKNYSSILTVHPEIIEGRAGTMVIESFVVDVPQGNTKDETCYFVEALIRCNLKSLADVSE 196 (205)
T ss_dssp EEEETTTTEEEEEEEEESSSCTTCEEEEEEEEECCCC-CEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCEEEEEEEecCcceeEEEEEEEEEEccCCCCceEEEEEEEeccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999987 3 489999999998878777654 5789999999999999
Q ss_pred HHHhh
Q 030202 166 EALQA 170 (181)
Q Consensus 166 ~~~~~ 170 (181)
+.+.+
T Consensus 197 ~~~~~ 201 (205)
T 3oqu_A 197 RLASQ 201 (205)
T ss_dssp HHHHH
T ss_pred Hhhhc
Confidence 97654
No 8
>3oji_A Abscisic acid receptor PYL3; crystal, PP2C, pyrabactin, HOR receptor; HET: PYV; 1.84A {Arabidopsis thaliana} PDB: 4ds8_A* 3klx_A* 4dsb_A* 4dsc_A*
Probab=99.96 E-value=2.3e-27 Score=186.16 Aligned_cols=151 Identities=21% Similarity=0.252 Sum_probs=123.1
Q ss_pred CCCCCCCCCCeeeEEEEEEeCCCHHHHHHHHhccCCcccccccceeEEEec-CCCC---CCceEEEEeeeecCCCCCCCC
Q 030202 6 DHHGKQEQPKWQGRACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQ-GISG---QPGCVRFCAGFKTPVDNKDDD 81 (181)
Q Consensus 6 ~~~~~~~~~~w~~~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~~~~~~~-G~~~---~vGsvR~~~~~~~~~~g~~G~ 81 (181)
.||+..-.|.=+.++....|+||+++||++++||++++.|.|+|.+|++.+ |+++ .+|++|.+++. . |
T Consensus 19 ~~~~~~~~~~~c~s~~~~~I~Ap~d~VWalVrdF~~p~~w~p~V~s~~~~e~Gdg~~~~~vGsVR~ltl~----~---G- 90 (189)
T 3oji_A 19 THHTFPRSPNTCTSLIAHRVDAPAHAIWRFVRDFANPNKYKHFIKSCTIRVNGNGIKEIKVGTIREVSVV----S---G- 90 (189)
T ss_dssp HHSCCCCC-CEEEEEEEEEESSCHHHHHHHHSCTTCGGGTCTTEEEEEECCC----CCCSTTCEEEEEEC----S---S-
T ss_pred HhcccCCCCCccceeEEEEEcCCHHHHHHHHhCCCChhhCccccceEEEEecCCCCccCCCCcEEEEEec----C---C-
Confidence 478887777777777444449999999999999999999999999999876 7543 29999999972 2 3
Q ss_pred CcCccceEEEEEEEEecCCCeEEEEEeecccceeeEEEEEEEEEc-----C----CceEEEEEEEEeeCCCCCHHHH---
Q 030202 82 HEQSVNWTKQKLLAINAEEMTLTYSIVDGNVGFYGYVSTLTVAPK-----E----NGCYIEWKYEVEPVKGWRLEDL--- 149 (181)
Q Consensus 82 ~~~~~~~~~Erl~~~D~~~~~~~y~v~~g~~p~~~~~~t~~v~p~-----~----~gT~v~W~~~~~p~~~~~~~~~--- 149 (181)
.+ ...++|||+.+|+++|+|+|+|++|++|+++|.++++|.|. | ++|++.|++.++|..+...+..
T Consensus 91 -~P-~~~i~ErL~~lDde~~~~sY~Iieg~~pv~nY~StitV~~~~~~~~G~~~~~~T~v~es~~~D~P~g~t~e~~~~~ 168 (189)
T 3oji_A 91 -LP-ASTSVEILEVLDEEKRILSFRVLGGEHRLNNYRSVTSVNEFVVLEKDKKKRVYSVVLESYIVDIPQGNTEEDTRMF 168 (189)
T ss_dssp -SS-BSEEEEEEEEEETTTTEEEEEEEECSBSSCSCEEEEEEEEEEEECTTSCEEEEEEEEEEEEEECCTTSCHHHHHHH
T ss_pred -Cc-CceEEEEEEEEeccCCEEEEEEEecCCccccEEEEEEEEeccccCCCccccCcEEEEEeEecCCCCCCCHHHHHHH
Confidence 22 34899999999999999999999999999999999999985 2 2599999999998777776655
Q ss_pred -HHHHHHHHHHHHHHHHH
Q 030202 150 -DCFISSGLQVMARRMKE 166 (181)
Q Consensus 150 -~~~~~~gl~~l~~~le~ 166 (181)
..+|+.+|++|++..|+
T Consensus 169 v~~v~~~gL~~L~~~~e~ 186 (189)
T 3oji_A 169 VDTVVKSNLQNLAVISTA 186 (189)
T ss_dssp HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhhc
Confidence 47799999999988774
No 9
>3p51_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 2.06A {Nitrosospira multiformis}
Probab=99.96 E-value=8.2e-28 Score=184.84 Aligned_cols=131 Identities=21% Similarity=0.353 Sum_probs=114.0
Q ss_pred eEEEEEEeCCCHHHHHHHHhccCCcccccccceeE-EEecCCC-CCCceEEEEeeeecCCCCCCCCCcCccceEEEEEEE
Q 030202 18 GRACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTC-IPIQGIS-GQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLA 95 (181)
Q Consensus 18 ~~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~~~-~~~~G~~-~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~ 95 (181)
-.++++| +|||++||++++||+++ +|+|.+.+| ++++|++ ++||++|.+ . | .++|||++
T Consensus 4 v~~si~I-~Ap~~~VW~~v~Df~~~-~w~P~v~~s~e~~eg~~~~~vGsvR~~-g---------g-------~v~Erl~~ 64 (160)
T 3p51_A 4 VYNSIVV-DAPVERVWSRIRNFHDF-SWAPSLIKSCKKVGGGGGYSVGARRLL-N---------G-------EFLDTLIA 64 (160)
T ss_dssp EEEEEEE-SSCHHHHHHHHCCTTCC-TTCTTTCCCEEEESSCCTTCTTCEEEE-T---------T-------TEEEEEEE
T ss_pred EEEEEEE-CCCHHHHHHHHhCcCCC-eEccCceEEEEEEecCCCCCCCCEEEE-C---------C-------EEEEEEEE
Confidence 3578999 99999999999999999 999999888 8777754 589999998 3 2 68999999
Q ss_pred EecCCCeEEEEEeecccc-----eeeEEEEEEEEEcC-C-ceEEEEEEEEeeCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 030202 96 INAEEMTLTYSIVDGNVG-----FYGYVSTLTVAPKE-N-GCYIEWKYEVEPVKGWRLEDLDCFISSGLQVMARRMKEA 167 (181)
Q Consensus 96 ~D~~~~~~~y~v~~g~~p-----~~~~~~t~~v~p~~-~-gT~v~W~~~~~p~~~~~~~~~~~~~~~gl~~l~~~le~~ 167 (181)
+|+++++|+|++++|++| +++|.++++|.|.+ + ||+|+|+++|+|..+.....+..+|+.+|++|++.+|+.
T Consensus 65 ~D~~~~~~sY~ii~g~l~~~~~~~~~y~~~~~v~p~~~~ggt~V~w~~~~~~~~~~~~~~~~~~~~~~L~~Lk~~~e~~ 143 (160)
T 3p51_A 65 YSEIERRIMYSMDEGPSPVSSGEIYNYVGNLHLLPVTIDDTTFVEWSGSWESASTEAVEYMNTVYRSLLADLAAEFTSE 143 (160)
T ss_dssp EETTTTEEEEEEEECSTTSSTTTEEEEEEEEEEEEETTTTEEEEEEEEEEEESCSHHHHHHHHHHHHHHHHHHHHSCTT
T ss_pred EcCCCcEEEEEEecCCCcccccceeEEEEEEEEEEecCCCCEEEEEEEEEEeCHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999998 99999999999985 4 699999999999754334445788999999999988753
No 10
>2flh_A Cytokinin-specific binding protein; zeatin, pathogenesis-related proteins, multiple- ligand binding, plant protein; HET: ZEA; 1.20A {Vigna radiata} PDB: 3c0v_A*
Probab=99.95 E-value=1.3e-26 Score=177.27 Aligned_cols=139 Identities=17% Similarity=0.301 Sum_probs=111.0
Q ss_pred EEEEEEeCCCHHHHHHH-HhccCCc-ccccccc-eeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCccceEEEEEEE
Q 030202 19 RACEELTGVKAEQIWAF-LEDFFGL-DKWFPTL-TTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLA 95 (181)
Q Consensus 19 ~v~~~I~~Ap~e~VW~~-l~Df~~~-~~w~P~v-~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~ 95 (181)
..+++| +|||++||++ ++||+++ |+|+|.+ .+|++++|+ +++|++|.+++. + | ... ..++|||+.
T Consensus 6 ~~e~~i-~a~a~kvw~~~v~d~~~l~pk~~P~~i~s~~~~eGd-gg~Gsvr~~~~~----~---g--~~~-~~~kErl~~ 73 (155)
T 2flh_A 6 NTQTEL-SVRLEALWAVLSKDFITVVPKVLPHIVKDVQLIEGD-GGVGTILIFNFL----P---E--VSP-SYQREEITE 73 (155)
T ss_dssp EEEEEE-SSCHHHHHHHHHTSCTTHHHHHCTTTEEEEEEEECS-SSTTCEEEEEEC----T---T--SSS-CEEEEEEEE
T ss_pred EEEEEe-cCCHHHHHHHHhcccccccchhccccceEEEEEcCC-CCCCeEEEEEee----C---C--CCC-cEEEEEEEE
Confidence 457889 9999999999 7999999 9999954 667877886 579999999972 2 2 111 489999999
Q ss_pred EecCCCeEEEEEeeccc---ceeeEEEEEEEEEcCC-ceEEEEEEEEeeCCCCCHHHHHHHHH--HHHHHHHHHHHHHHh
Q 030202 96 INAEEMTLTYSIVDGNV---GFYGYVSTLTVAPKEN-GCYIEWKYEVEPVKGWRLEDLDCFIS--SGLQVMARRMKEALQ 169 (181)
Q Consensus 96 ~D~~~~~~~y~v~~g~~---p~~~~~~t~~v~p~~~-gT~v~W~~~~~p~~~~~~~~~~~~~~--~gl~~l~~~le~~~~ 169 (181)
+|+++++++|++++|++ |+++|.++++|.|.++ ||+++|+++|++..+..+ .+ ..+. ..+..|.+.||+|++
T Consensus 74 iD~~~~~~~y~iieg~~l~~~~~~~~~~i~v~p~~~ggs~v~wt~~y~~~~~~~~-~~-~~~~~~~~~~~~~k~ie~yll 151 (155)
T 2flh_A 74 FDESSHEIGLQVIEGGYLSQGLSYYKTTFKLSEIEEDKTLVNVKISYDHDSDIEE-KV-TPTKTSQSTLMYLRRLERYLS 151 (155)
T ss_dssp EETTTTEEEEEEEEEGGGGTTCSEEEEEEEEEEEETTEEEEEEEEEEEC--------C-CHHHHHHHHHHHHHHHHHHHC
T ss_pred EeCCCCEEEEEEEeccccccCceEEEEEEEEEECCCCCEEEEEEEEEEECCCCcc-Ch-hHhhhHHHHHHHHHHHHHHHh
Confidence 99999999999999975 7999999999999875 699999999999865544 22 2355 778899999999998
Q ss_pred hh
Q 030202 170 AY 171 (181)
Q Consensus 170 ~~ 171 (181)
++
T Consensus 152 ~~ 153 (155)
T 2flh_A 152 NG 153 (155)
T ss_dssp --
T ss_pred hC
Confidence 75
No 11
>2vjg_A Major allergen DAU C 1; major carrot allergen, pathogenesis-related protein, plant defense; HET: P4C PG4 PGE; 2.70A {Daucus carota} PDB: 2wql_A* 2bk0_A
Probab=99.95 E-value=3.6e-26 Score=174.79 Aligned_cols=138 Identities=17% Similarity=0.165 Sum_probs=115.9
Q ss_pred EEEEEEeCCCHHHHHHH-HhccCCc-cccccc-ceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCccceEEEEEEE
Q 030202 19 RACEELTGVKAEQIWAF-LEDFFGL-DKWFPT-LTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLA 95 (181)
Q Consensus 19 ~v~~~I~~Ap~e~VW~~-l~Df~~~-~~w~P~-v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~ 95 (181)
..+++| +|||++||++ ++||+++ |+|+|. +.+|++ +|+ +++|++|.+++. .| | + .+.++|||..
T Consensus 7 ~~ei~i-~a~a~kvw~~~v~d~~~l~pk~~P~~v~s~e~-eGd-g~~Gsir~~~~~----~g--~---~-~~~~kErl~~ 73 (154)
T 2vjg_A 7 SLEITS-SVSAEKIFSGIVLDVDTVIPKAATGAYKSVEV-KGD-GGAGTVRIITLP----EG--S---P-ITTMTVRTDA 73 (154)
T ss_dssp EEEEEE-SSCHHHHHHHHTTTHHHHHHHHSTTTCSEEEE-ESS-SSTTCEEEEECC----TT--C---S-CCEEEEEEEE
T ss_pred EEEEEe-cCCHHHHHHhhhCCccccchhhccCceeEEEE-eCC-CCCceEEEEEec----CC--C---C-ceEEEEEEEE
Confidence 457889 9999999998 9999999 999995 778888 886 679999999972 33 2 2 3589999999
Q ss_pred EecCCCeEEEEEeeccc---ceeeEEEEEEEEEcCC-ceEEEEEEEEeeCCCCC--HHHHHHHHHHHHHHHHHHHHHHHh
Q 030202 96 INAEEMTLTYSIVDGNV---GFYGYVSTLTVAPKEN-GCYIEWKYEVEPVKGWR--LEDLDCFISSGLQVMARRMKEALQ 169 (181)
Q Consensus 96 ~D~~~~~~~y~v~~g~~---p~~~~~~t~~v~p~~~-gT~v~W~~~~~p~~~~~--~~~~~~~~~~gl~~l~~~le~~~~ 169 (181)
+|+++++++|++++|+. ++++|.++++|.|.++ ||+|+|+.+|++..+.. ++.+ ..+......|.+.+|+|++
T Consensus 74 iD~~~~~~~y~iiegd~l~~~~~~~~~ti~v~p~~~ggs~v~wt~~y~~~~~~~~~~~~~-~~~~~~~~~~~k~ie~yll 152 (154)
T 2vjg_A 74 VNKEALSYDSTVIDGDILLGFIESIETHMVVVPTADGGSITKTTAIFHTKGDAVVPEENI-KFADAQNTALFKAIEAYLI 152 (154)
T ss_dssp EETTTTEEEEEEEESGGGTTTEEEEEEEEEEEECTTSCEEEEEEEEEEESTTCCCCHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred EeccCCEEEEEEEecCCCccceEEEEEEEEEEECCCCcEEEEEEEEEEECCCCCCCHHHH-HHHHHHHHHHHHHHHHHHh
Confidence 99999999999999975 3899999999999865 69999999999987643 3443 3366777889999999987
Q ss_pred h
Q 030202 170 A 170 (181)
Q Consensus 170 ~ 170 (181)
+
T Consensus 153 a 153 (154)
T 2vjg_A 153 A 153 (154)
T ss_dssp H
T ss_pred c
Confidence 5
No 12
>3rws_A MTN13 protein; zeatin, cytokinin, hormone, lucerne, nodulin, NODU plant protein; HET: ZEA; 1.85A {Medicago truncatula}
Probab=99.95 E-value=4.7e-26 Score=176.42 Aligned_cols=139 Identities=19% Similarity=0.215 Sum_probs=117.4
Q ss_pred eEEEEEEeCCCHHHHHHHH-hccCC-ccccccc-ceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCccceEEEEEE
Q 030202 18 GRACEELTGVKAEQIWAFL-EDFFG-LDKWFPT-LTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKLL 94 (181)
Q Consensus 18 ~~v~~~I~~Ap~e~VW~~l-~Df~~-~~~w~P~-v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl~ 94 (181)
=..+++| +|||++||+++ +||++ +|+|+|. +.+|++++|+ +++|++|.+++. + + ...++|||+
T Consensus 11 ~~~ei~i-~apa~kvw~~~v~d~~~l~pk~~P~~v~s~e~~eGd-gg~Gsir~~t~~-----g--~-----~~~~kErl~ 76 (168)
T 3rws_A 11 SESEYVS-SLSAEKLYRGIVEDGNIIYPKALPRFIEKAETLEGD-GGPGTIKKLTFV-----G--D-----FGSTKQHID 76 (168)
T ss_dssp EEEEEEE-SSCHHHHHHHHHTSHHHHHHHHSTTTEEEEEEEESS-SSTTCEEEEEES-----S--S-----SCEEEEEEE
T ss_pred EEEEEEe-cCCHHHHHHHHhcCccccchhhCccccceEEEeeCC-CCCCeEEEEEEc-----C--C-----CeEEEEEEE
Confidence 3568889 99999999996 99999 4999995 7888888887 579999999972 2 1 238999999
Q ss_pred EEecCCCeEEEEEeeccc----ceeeEEEEEEEEEcCC-ceEEEEEEEEeeCCC-C--CHHHHHHHHHHHHHHHHHHHHH
Q 030202 95 AINAEEMTLTYSIVDGNV----GFYGYVSTLTVAPKEN-GCYIEWKYEVEPVKG-W--RLEDLDCFISSGLQVMARRMKE 166 (181)
Q Consensus 95 ~~D~~~~~~~y~v~~g~~----p~~~~~~t~~v~p~~~-gT~v~W~~~~~p~~~-~--~~~~~~~~~~~gl~~l~~~le~ 166 (181)
++|+++++++|++++|++ |++.|.++++|.|.++ ||+|+|+.+|++..+ . .++.+ ..+......|.+.+|+
T Consensus 77 ~iD~~~~~~sY~iiegd~l~~~p~~~y~~ti~v~p~~~ggs~v~wt~~y~~~~~d~~~~~e~~-k~~~~~~~~~~k~ie~ 155 (168)
T 3rws_A 77 MVDRENCAYTYSVYEGIALSDQPLEKIVFEFKLVPTPEEGCIVKSTTKYYTKGDDIELSKDYL-EAGIERFEGFTKAVES 155 (168)
T ss_dssp EEETTTTEEEEEECSSCCBTTBCEEEEEEEEEEEECTTSCEEEEEEEEEEECSSSCCCCHHHH-HHHHHHHHHHHHHHHH
T ss_pred EEcccCCEEEEEEEccCcccCcCceEEEEEEEEEECCCCceEEEEEEEEEECCCccCCCHHHH-HHHHHHHHHHHHHHHH
Confidence 999999999999999987 7999999999999876 699999999999876 3 23444 3467777899999999
Q ss_pred HHhhh
Q 030202 167 ALQAY 171 (181)
Q Consensus 167 ~~~~~ 171 (181)
|+++.
T Consensus 156 yllan 160 (168)
T 3rws_A 156 FLLAN 160 (168)
T ss_dssp HHHHC
T ss_pred HHHhC
Confidence 99864
No 13
>4a8u_A Major pollen allergen BET V 1-J; PR-10 protein; 1.16A {Betula pendula} PDB: 4a8v_A* 4a87_A* 4a81_A* 4a80_A* 4a83_A* 4a86_A* 4a85_A* 4a88_A 4a8g_A* 1b6f_A 1btv_A 1bv1_A 1fsk_A 4a84_A* 1llt_A 1fm4_A* 3k78_A 1qmr_A
Probab=99.94 E-value=7.4e-26 Score=173.85 Aligned_cols=140 Identities=14% Similarity=0.190 Sum_probs=117.0
Q ss_pred EEEEEEeCCCHHHHHHHH-hccCCc-cccccc-ceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCccceEEEEEEE
Q 030202 19 RACEELTGVKAEQIWAFL-EDFFGL-DKWFPT-LTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLA 95 (181)
Q Consensus 19 ~v~~~I~~Ap~e~VW~~l-~Df~~~-~~w~P~-v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~ 95 (181)
..+++| +|||++||+++ +||+++ |+|+|. +.+|++++|++ ++|++|.+++. .| | + ...++|||+.
T Consensus 6 ~~ei~i-~a~a~kvw~~~~~d~~~l~pk~~P~~i~s~e~~eGdg-g~Gsir~~~~~----~g--~---~-~~~~kErl~~ 73 (159)
T 4a8u_A 6 ETEATS-VIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNG-GPGTIKKISFP----EG--F---P-FKYVKDRVDE 73 (159)
T ss_dssp EEEEEE-SSCHHHHHHHHTTTHHHHHHHHCTTTCCEEEEEECSS-STTCEEEEECC----TT--S---S-CSEEEEEEEE
T ss_pred EEEEEe-cCCHHHHHHHHhcCccccchhhCchhccEEEEEcCCC-CCceEEEEEEe----cC--C---C-ccEEEEEEEE
Confidence 468889 99999999998 999995 999994 78888888864 69999999972 23 2 2 4589999999
Q ss_pred EecCCCeEEEEEeeccc---ceeeEEEEEEEEEcCC-ceEEEEEEEEeeCCCCC--HHHHHHHHHHHHHHHHHHHHHHHh
Q 030202 96 INAEEMTLTYSIVDGNV---GFYGYVSTLTVAPKEN-GCYIEWKYEVEPVKGWR--LEDLDCFISSGLQVMARRMKEALQ 169 (181)
Q Consensus 96 ~D~~~~~~~y~v~~g~~---p~~~~~~t~~v~p~~~-gT~v~W~~~~~p~~~~~--~~~~~~~~~~gl~~l~~~le~~~~ 169 (181)
+|+++++++|++++|++ ++++|.++++|.|.++ ||+|+|+.+|++..+.. ++.+ ..+...+..|.+.+|+|++
T Consensus 74 iD~~~~~~~y~iiegd~l~~~~~~y~~ti~v~p~~~ggs~v~wt~~y~~~~~~~~~~~~~-k~~~~~~~~~~k~ie~yll 152 (159)
T 4a8u_A 74 VDHTNFKYSYSVIEGGPVGDTLEKISNEIKIVATPNGGSILKINNKYHTKGDHEVKAEQI-KASKEMGETLLRAVESYLL 152 (159)
T ss_dssp EETTTTEEEEEEEEETTCBTTEEEEEEEEEEEECTTSCEEEEEEEEEEESSSCCC-CHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred EccccCEEEEEEeeCCCCccceEEEEEEEEEEECCCCceEEEEEEEEEECCCCcCCHHHH-HHHHHHHHHHHHHHHHHHh
Confidence 99999999999999975 3899999999999876 69999999999987643 3333 3356677899999999987
Q ss_pred hh
Q 030202 170 AY 171 (181)
Q Consensus 170 ~~ 171 (181)
+.
T Consensus 153 ~n 154 (159)
T 4a8u_A 153 AH 154 (159)
T ss_dssp HC
T ss_pred hC
Confidence 64
No 14
>1e09_A PRU AV 1; allergen, major cherry allergen, pathogenesis-related protein, heteronuclear structure; NMR {Prunus avium} SCOP: d.129.3.1 PDB: 1h2o_A 2lpx_A
Probab=99.94 E-value=5.5e-26 Score=174.28 Aligned_cols=140 Identities=12% Similarity=0.153 Sum_probs=118.6
Q ss_pred EEEEEEeCCCHHHHHHHHh-ccCCc-ccccc-cceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCccceEEEEEEE
Q 030202 19 RACEELTGVKAEQIWAFLE-DFFGL-DKWFP-TLTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLA 95 (181)
Q Consensus 19 ~v~~~I~~Ap~e~VW~~l~-Df~~~-~~w~P-~v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~ 95 (181)
..+++| +|||++||++++ ||+++ |+|+| .+.+|++++|++ ++|++|.+++. + | ....+++|||+.
T Consensus 6 ~~e~~i-~ap~~~vw~~~~~d~~~~~pk~~P~~i~s~~~~eGdg-g~Gsvr~~~~~----~---G---~~~~~~kErl~~ 73 (159)
T 1e09_A 6 ESEFTS-EIPPPRLFKAFVLDADNLVPKIAPQAIKHSEILEGDG-GPGTIKKITFG----E---G---SQYGYVKHKIDS 73 (159)
T ss_dssp EEEEEE-SSCHHHHHHHHTTTHHHHHHHHCTTTEEEEEEEESSS-STTCEEEEEEC----C---S---SSCEEEEEEEEE
T ss_pred EEEEEe-cCCHHHHHHHHhcCccccchhhChhhccEEEEEeCCC-CCceEEEEEec----C---C---CCceEEEEEEEE
Confidence 467889 999999999998 99864 99999 678899888854 89999999972 2 3 223589999999
Q ss_pred EecCCCeEEEEEeeccc---ceeeEEEEEEEEEcCC-ceEEEEEEEEeeCCCCC--HHHHHHHHHHHHHHHHHHHHHHHh
Q 030202 96 INAEEMTLTYSIVDGNV---GFYGYVSTLTVAPKEN-GCYIEWKYEVEPVKGWR--LEDLDCFISSGLQVMARRMKEALQ 169 (181)
Q Consensus 96 ~D~~~~~~~y~v~~g~~---p~~~~~~t~~v~p~~~-gT~v~W~~~~~p~~~~~--~~~~~~~~~~gl~~l~~~le~~~~ 169 (181)
+|+++++++|++++|++ ++++|.++++|.|.++ ||+++|+++|++..+.. ++.+ ......+..|.+.||++++
T Consensus 74 ~D~~~~~~~y~iieG~~~~~~~~~~~~~~~v~~~~~~gs~v~wt~~y~~~~~~~~~~~~~-~~~~~~~~~~~k~ie~yll 152 (159)
T 1e09_A 74 IDKENYSYSYTLIEGDALGDTLEKISYETKLVASPSGGSIIKSTSHYHTKGNVEIKEEHV-KAGKEKASNLFKLIETYLK 152 (159)
T ss_dssp EETTTTEEEEEECCCTTTGGGEEEEEEEEEECCCTTSSEEEEEEEEEEECSSCCCCHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred EcCCCCEEEEEEEecccCcccceEEEEEEEEEecCCCCEEEEEEEEEEECCCCCCCHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 99999999999999986 7999999999999875 79999999999976543 4443 3568889999999999987
Q ss_pred hh
Q 030202 170 AY 171 (181)
Q Consensus 170 ~~ 171 (181)
+.
T Consensus 153 ~~ 154 (159)
T 1e09_A 153 GH 154 (159)
T ss_dssp HC
T ss_pred hC
Confidence 64
No 15
>1tw0_A Pathogenesis-related class 10 protein SPE-16; seven antiparallel beta-sheet, plant protein; 2.20A {Pachyrhizus erosus} SCOP: d.129.3.1 PDB: 1txc_A*
Probab=99.94 E-value=1.9e-25 Score=170.95 Aligned_cols=140 Identities=14% Similarity=0.070 Sum_probs=118.4
Q ss_pred EEEEEEeCCCHHHHHHHHh-ccCCc-ccccccceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCccceEEEEEEEE
Q 030202 19 RACEELTGVKAEQIWAFLE-DFFGL-DKWFPTLTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLAI 96 (181)
Q Consensus 19 ~v~~~I~~Ap~e~VW~~l~-Df~~~-~~w~P~v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~~ 96 (181)
..+++| +|||++||++++ ||+++ |+|+|.+.+|++++|++ ++|++|.+++. + | .....++|||+.+
T Consensus 6 ~~e~~i-~a~a~kvw~~~~~d~~~~~pk~~~~i~s~~i~eG~g-~~Gsir~~~~~----~---G---~~~~~~kErl~~~ 73 (157)
T 1tw0_A 6 RDETSS-SVAPAKLYKALTKDSDTIAQKIDGPIQSIELVEGNG-GVGTIKKITAN----E---G---DKTSFVLQKVDAI 73 (157)
T ss_dssp EEEEEE-SSCHHHHHHHHHHTGGGGGGGSCSSEEEEEEEESSS-STTCEEEEEEE----E---T---TEEEEEEEEEEEE
T ss_pred EEEEEe-cCCHHHHHHHHhcCcchhhhhHHhhccEEEEEeCCC-CCCeEEEEEee----C---C---CccceEEEEEEEE
Confidence 467889 999999999998 99965 99999999999998864 89999999973 2 3 1234799999999
Q ss_pred ecCCCeEEEEEeeccc-c--eeeEEEEEEEEEcCC-ceEEEEEEEEeeCCCCC--HHHHHHHHHHHHHHHHHHHHHHHhh
Q 030202 97 NAEEMTLTYSIVDGNV-G--FYGYVSTLTVAPKEN-GCYIEWKYEVEPVKGWR--LEDLDCFISSGLQVMARRMKEALQA 170 (181)
Q Consensus 97 D~~~~~~~y~v~~g~~-p--~~~~~~t~~v~p~~~-gT~v~W~~~~~p~~~~~--~~~~~~~~~~gl~~l~~~le~~~~~ 170 (181)
|+++++++|++++|+. + +++|.++++|.|.++ ||+++|+++|++..+.. ++.+ ......+..|.+.||+++++
T Consensus 74 D~~~~~~~y~iieGd~~~~~~~~~~~~~~v~~~~~~gs~v~w~~~y~~~~~~~~~~~~~-~~~~~~~~~~~k~ie~yll~ 152 (157)
T 1tw0_A 74 DEANLGYDYSIVGGTGLPESLEKLSFETKVVAGSGGGSISKVTLKFHTKGDAPLSDAVR-DDALAKGAGFFKAIEGYVLA 152 (157)
T ss_dssp ETTTTEEEEEEEECTTSCTTEEEEEEEEEEEECSSSSEEEEEEEEEEESTTCCCCHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred eccCCEEEEEEEecCCCccceEEEEEEEEEEecCCCCEEEEEEEEEEECCCCCCCHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999975 4 899999999999875 79999999999986543 3333 34678899999999999876
Q ss_pred h
Q 030202 171 Y 171 (181)
Q Consensus 171 ~ 171 (181)
.
T Consensus 153 ~ 153 (157)
T 1tw0_A 153 N 153 (157)
T ss_dssp C
T ss_pred C
Confidence 5
No 16
>3ie5_A Phenolic oxidative coupling protein HYP-1; hypericin, ST JOHN'S WORT, depression, allergy, PR-10 protein, cytokinin, plant hormones; HET: PGE PG4 PE8 1PE; 1.69A {Hypericum perforatum} SCOP: d.129.3.0
Probab=99.94 E-value=1.6e-25 Score=173.01 Aligned_cols=140 Identities=17% Similarity=0.186 Sum_probs=116.1
Q ss_pred EEEEEEeCCCHHHHHHH-HhccCCc-cccccc-ceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCccceEEEEEEE
Q 030202 19 RACEELTGVKAEQIWAF-LEDFFGL-DKWFPT-LTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLA 95 (181)
Q Consensus 19 ~v~~~I~~Ap~e~VW~~-l~Df~~~-~~w~P~-v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~ 95 (181)
..+++| +|||++||++ ++||+++ |+|+|. +.+|++++|+ +++|++|.+++. .| | + .+.++|||++
T Consensus 13 ~~ev~i-~a~a~kvw~~~v~d~~~l~pk~~P~~v~s~e~~eGd-g~~Gsir~~~~~----~g--~---~-~~~~kErl~~ 80 (165)
T 3ie5_A 13 VKEEES-PIAPHRLFKALVLERHQVLVKAQPHVFKSGEIIEGD-GGVGTVTKITFV----DG--H---P-LTYMLHKFDE 80 (165)
T ss_dssp EEEEEE-SSCHHHHHHHHTTTHHHHHHHHCTTTEEEEEEEESS-SSTTCEEEEEEC----TT--S---S-CCEEEEEEEE
T ss_pred EEEEEe-cCCHHHHHHHhcCCccccchhhCCcccceEEEecCC-CCCCeEEEEEec----CC--C---C-CceEEEEEEE
Confidence 457888 9999999999 5899999 999995 7778877886 689999999972 33 3 2 3589999999
Q ss_pred EecCCCeEEEEEeeccc---ceeeEEEEEEEEEcCCceEEEEEEEEeeCCCC--CHHHHHHHHHHHHHHHHHHHHHHHhh
Q 030202 96 INAEEMTLTYSIVDGNV---GFYGYVSTLTVAPKENGCYIEWKYEVEPVKGW--RLEDLDCFISSGLQVMARRMKEALQA 170 (181)
Q Consensus 96 ~D~~~~~~~y~v~~g~~---p~~~~~~t~~v~p~~~gT~v~W~~~~~p~~~~--~~~~~~~~~~~gl~~l~~~le~~~~~ 170 (181)
+|+++++++|++++|++ +++.|.++++|.+.++||+++|+++|++..+. .++.+ ..+......|.+.+|+|+++
T Consensus 81 iD~~~~~~~Y~iieG~~l~~~~~~y~~~i~v~~~~ggs~vkwt~~y~~~~~~~~~~e~~-k~~~~~~~~~~K~ie~ylla 159 (165)
T 3ie5_A 81 IDAANFYCKYTLFEGDVLRDNIEKVVYEVKLEAVGGGSKGKITVTYHPKPGCTVNEEEV-KIGEKKAYEFYKQVEEYLAA 159 (165)
T ss_dssp EEGGGTEEEEEEEEEGGGTTTEEEEEEEEEEEEETTEEEEEEEEEEEECTTCCCCHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred EchhcCEEEEEEecCCCCccceEEEEEEEEEEeCCCceEEEEEEEEEECCCCCCCHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999974 49999999999954557999999999998764 34444 33566778899999999876
Q ss_pred h
Q 030202 171 Y 171 (181)
Q Consensus 171 ~ 171 (181)
.
T Consensus 160 n 160 (165)
T 3ie5_A 160 N 160 (165)
T ss_dssp C
T ss_pred C
Confidence 4
No 17
>3qrz_A Abscisic acid receptor PYL5; crystal, hormone receptor; 2.60A {Arabidopsis thaliana}
Probab=99.94 E-value=1.5e-28 Score=197.74 Aligned_cols=150 Identities=19% Similarity=0.282 Sum_probs=116.1
Q ss_pred CCCCCCC-CCCeeeEEEEEEeCCCHHHHHHHHhccCCcccccccceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcC
Q 030202 6 DHHGKQE-QPKWQGRACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQ 84 (181)
Q Consensus 6 ~~~~~~~-~~~w~~~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~ 84 (181)
.||+..- ..+....++.+| +|||++||++++||+++..|.|.|.+|++.+|+++++|++|.+++. + | .+
T Consensus 67 ~~~~h~~~~~~~~~~v~~~I-~ApadkVW~lv~Df~~pk~w~p~I~s~el~eGdg~gvGSVR~lt~~----~---G--~p 136 (223)
T 3qrz_A 67 MHHTHDVGPDQCCSSVVQMI-HAPPESVWALVRRFDNPKVYKNFIRQCRIVQGDGLHVGDLREVMVV----S---G--LP 136 (223)
T ss_dssp TTTSCCCCTTCEEECCCCCC-SSCHHHHHHHHHCCSSGGGTCSSCCCCCCCC---CCSSCCCCCCC------------CC
T ss_pred HhhccCCCCCeEEEEEEEEE-cCCHHHHHHHHhCCCChhHcchhcCEEEEEcCCCCCCCeEEEEEec----C---C--Cc
Confidence 3555443 566888888899 9999999999999999989999999999888877789999999872 2 3 12
Q ss_pred ccceEEEEEEEEecCCCeEEEEEeecccceeeEEEEEEEEEcCC-ceEEEEEEEEeeCCCCCHH----HHHHHHHHHHHH
Q 030202 85 SVNWTKQKLLAINAEEMTLTYSIVDGNVGFYGYVSTLTVAPKEN-GCYIEWKYEVEPVKGWRLE----DLDCFISSGLQV 159 (181)
Q Consensus 85 ~~~~~~Erl~~~D~~~~~~~y~v~~g~~p~~~~~~t~~v~p~~~-gT~v~W~~~~~p~~~~~~~----~~~~~~~~gl~~ 159 (181)
...++|||+++|+++++|+|+|++|++|++.|.++++|.|.++ ||+|+|++.|+|..+...+ .+..+|+.||++
T Consensus 137 -~~~vkErLe~iDde~~~~sYsIieG~~p~~~Y~stikV~p~~dGGT~V~Ws~~f~pp~g~~~e~a~~~v~~~y~~gL~~ 215 (223)
T 3qrz_A 137 -AVSSTERLEILDEERHVISFSVVGGDHRLKNYRSVTTLHASDDEGTVVVESYIVDVPPGNTEEETLSFVDTIVRCNLQS 215 (223)
T ss_dssp -CCCCCCCCSEEETTTTEEECCCTTCSSSCCCCCCEEEC--------CCEEEEEECSCSSSCSTTHHHHHHHHHHHHHHH
T ss_pred -cceEEEEEEEEeccCCEEEEEEEeCCCccccEEEEEEEEEcCCCCEEEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3479999999999999999999999999999999999999865 6999999999975554433 336789999999
Q ss_pred HHHHHHH
Q 030202 160 MARRMKE 166 (181)
Q Consensus 160 l~~~le~ 166 (181)
|++.+|+
T Consensus 216 Lk~~~E~ 222 (223)
T 3qrz_A 216 LARSTNR 222 (223)
T ss_dssp HHHTCC-
T ss_pred HHHHHcc
Confidence 9987764
No 18
>1icx_A Protein LLR18A, LLPR10.1A; 7-stranded beta sheet, C-terminal helix, allergen; 1.95A {Lupinus luteus} SCOP: d.129.3.1 PDB: 1ifv_A
Probab=99.94 E-value=1.3e-25 Score=171.57 Aligned_cols=141 Identities=15% Similarity=0.152 Sum_probs=117.4
Q ss_pred EEEEEEeCCCHHHHHHHHh-ccCCc-ccccccceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCccceEEEEEEEE
Q 030202 19 RACEELTGVKAEQIWAFLE-DFFGL-DKWFPTLTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLAI 96 (181)
Q Consensus 19 ~v~~~I~~Ap~e~VW~~l~-Df~~~-~~w~P~v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~~ 96 (181)
..+++| +|||++||++++ ||+++ |+|+|.+.+|++++|++ ++|++|.+++. + | .....++|||+.+
T Consensus 6 ~~e~~i-~a~a~kvw~~~~~d~~~~~pk~~~~i~s~~i~eG~g-~~Gsir~~~~~----~---G---~~~~~~kErl~~~ 73 (155)
T 1icx_A 6 ENEQSS-TVAPAKLYKALTKDSDEIVPKVIEPIQSVEIVEGNG-GPGTIKKIIAI----H---D---GHTSFVLHKLDAI 73 (155)
T ss_dssp EEEEEE-SSCHHHHHHHHTTTHHHHHHHHSTTEEEEEEEESSS-STTCEEEEEEE----S---S---SSEEEEEEEEEEE
T ss_pred EEEEEe-cCCHHHHHHHHhcCcchhcchhhhhccEEEEEecCC-CCCeEEEEEEe----c---C---CcceeEEEEEEEE
Confidence 467888 999999999999 99865 99999999999998864 89999999972 3 3 1235799999999
Q ss_pred ecCCCeEEEEEeeccc-c--eeeEEEEEEEEEcCC-ceEEEEEEEEeeCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 030202 97 NAEEMTLTYSIVDGNV-G--FYGYVSTLTVAPKEN-GCYIEWKYEVEPVKGWRLEDLDCFISSGLQVMARRMKEALQAY 171 (181)
Q Consensus 97 D~~~~~~~y~v~~g~~-p--~~~~~~t~~v~p~~~-gT~v~W~~~~~p~~~~~~~~~~~~~~~gl~~l~~~le~~~~~~ 171 (181)
|+++++++|++++|+. + +++|.++++|.|.++ ||+++|+++|++..+...+.....+...+..|.+.||+++++.
T Consensus 74 D~~~~~~~y~iieGd~~~~~~~~~~~~~~v~~~~~~gs~v~w~~~y~~~~~~~~~~~~~~~~~~~~~~~k~ie~yll~~ 152 (155)
T 1icx_A 74 DEANLTYNYSIIGGEGLDESLEKISYESKILPGPDGGSIGKINVKFHTKGDVLSETVRDQAKFKGLGLFKAIEGYVLAH 152 (155)
T ss_dssp EGGGTEEEEEEEEETTSCTTEEEEEEEEEEEECGGGCEEEEEEEEEEESSSSCCHHHHTTHHHHHHHHHHHHHHHHHHC
T ss_pred eccCCEEEEEEEecCCCccceEEEEEEEEEEecCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999974 4 899999999999875 7999999999998654222222345778889999999998764
No 19
>2qim_A PR10.2B; trans-zeatin, cytokinin, plant hormones, plant protein, PR-1 protein, pathogenesis-related protein, allergen; HET: ZEA; 1.35A {Lupinus luteus} PDB: 3e85_A* 1xdf_A* 2k7h_A
Probab=99.94 E-value=2.1e-25 Score=170.91 Aligned_cols=140 Identities=15% Similarity=0.123 Sum_probs=118.4
Q ss_pred EEEEEEeCCCHHHHHHHHh-ccCCc-ccccccceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCccceEEEEEEEE
Q 030202 19 RACEELTGVKAEQIWAFLE-DFFGL-DKWFPTLTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLAI 96 (181)
Q Consensus 19 ~v~~~I~~Ap~e~VW~~l~-Df~~~-~~w~P~v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~~ 96 (181)
..+++| +|||++||++++ ||+++ |+|+|.+.+|++++|++ ++|++|.+++. + | .....++|||+.+
T Consensus 7 ~~e~~i-~a~a~kvw~~~~~d~~~~~pk~~~~i~s~~i~eGdg-g~Gsir~~~~~----~---g---~~~~~~kErl~~~ 74 (158)
T 2qim_A 7 QDEYTS-TIAPAKLYKALVTDADIIIPKAVETIQSVEIVEGNG-GPGTIKKLTFI----E---G---GESKYVLHKIEAI 74 (158)
T ss_dssp EEEEEE-SSCHHHHHHHHTTTHHHHHHHHCTTEEEEEEEESSS-STTCEEEEEEE----E---T---TEEEEEEEEEEEE
T ss_pred EEEEEe-cCCHHHHHHHHhcCccchhhhHHhhCcEEEEEecCC-CCCeEEEEEEc----C---C---CcceeEEEEEEEE
Confidence 467888 999999999999 99976 99999999999988854 89999999973 2 3 1234799999999
Q ss_pred ecCCCeEEEEEeeccc-c--eeeEEEEEEEEEcCC-ceEEEEEEEEeeCCCCC--HHHHHHHHHHHHHHHHHHHHHHHhh
Q 030202 97 NAEEMTLTYSIVDGNV-G--FYGYVSTLTVAPKEN-GCYIEWKYEVEPVKGWR--LEDLDCFISSGLQVMARRMKEALQA 170 (181)
Q Consensus 97 D~~~~~~~y~v~~g~~-p--~~~~~~t~~v~p~~~-gT~v~W~~~~~p~~~~~--~~~~~~~~~~gl~~l~~~le~~~~~ 170 (181)
|+++++++|++++|+. + +++|.++++|.|.++ ||+++|+++|++..+.. ++.+ ......+..|.+.||+++++
T Consensus 75 D~~~~~~~y~iieG~~~~~~~~~~~~~~~v~~~~~~gs~v~wt~~y~~~~~~~~~~~~~-~~~~~~~~~~~k~ie~yll~ 153 (158)
T 2qim_A 75 DEANLGYNYSIVGGVGLPDTIEKISFETKLVEGANGGSIGKVTIKIETKGDAQPNEEEG-KAAKARGDAFFKAIESYLSA 153 (158)
T ss_dssp EGGGTEEEEEEEEESSCCCSEEEEEEEEEEEECSTTCEEEEEEEEEEESTTCCCCHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCEEEEEEEeccCCccceEEEEEEEEEEecCCCCEEEEEEEEEEECCCCCCCHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999974 4 899999999999875 79999999999986543 3333 34678899999999999976
Q ss_pred h
Q 030202 171 Y 171 (181)
Q Consensus 171 ~ 171 (181)
.
T Consensus 154 ~ 154 (158)
T 2qim_A 154 H 154 (158)
T ss_dssp C
T ss_pred C
Confidence 5
No 20
>2vq5_A S-norcoclaurine synthase; lyase, S- norcoclaurine biosynthesis, dopamine, hydroxybenzaldehyde; HET: MSE LDP HBA; 2.09A {Thalictrum flavum} PDB: 2vne_A*
Probab=99.93 E-value=3.8e-25 Score=175.67 Aligned_cols=137 Identities=19% Similarity=0.264 Sum_probs=113.9
Q ss_pred EEEEEeCCCHHHHHHH-Hh-ccCCc-cccccc-ceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCccceEEEEEEE
Q 030202 20 ACEELTGVKAEQIWAF-LE-DFFGL-DKWFPT-LTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLA 95 (181)
Q Consensus 20 v~~~I~~Ap~e~VW~~-l~-Df~~~-~~w~P~-v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~ 95 (181)
.+++| +|||++||++ ++ ||+++ |+|+|. +.+|+++ |+ |++|++|.+++. +| ....+++|||++
T Consensus 33 ~eveI-~apa~kvW~~~v~~df~~l~pk~~P~~i~s~e~~-Gd-Gg~GsIR~lt~~----~G------~~~~~vkErle~ 99 (201)
T 2vq5_A 33 HELEV-AASADDIWTVYSWPGLAKHLPDLLPGAFEKLEII-GD-GGVGTILDMTFV----PG------EFPHEYKEKFIL 99 (201)
T ss_dssp EEEEE-SSCHHHHHHHHTCGGGGGGHHHHSTTSCSEEEEE-SS-SSTTCEEEEECC----TT------CSSCEEEEEEEE
T ss_pred EEEEe-cCCHHHHHhhhhcCCcccchhhhCcccceEEEEe-cC-CCCCeEEEEEec----CC------CcccEEEEEEEE
Confidence 68889 9999999999 57 99999 999996 4677888 76 589999999972 33 223589999999
Q ss_pred EecCCCeEEEEEeeccc---ceeeEEEEEEEEEcCC-ceEEEEEEEEeeCCCC-C-HHHHHHHHHHHHHHHHHHHHHHHh
Q 030202 96 INAEEMTLTYSIVDGNV---GFYGYVSTLTVAPKEN-GCYIEWKYEVEPVKGW-R-LEDLDCFISSGLQVMARRMKEALQ 169 (181)
Q Consensus 96 ~D~~~~~~~y~v~~g~~---p~~~~~~t~~v~p~~~-gT~v~W~~~~~p~~~~-~-~~~~~~~~~~gl~~l~~~le~~~~ 169 (181)
+|+++++++|++++|+. ++++|.++++|.|.++ ||.++|+++|++..+. . ++.. .+...+..|.+.||++++
T Consensus 100 iDde~~~~sYsiieGd~l~~~~~~y~~tikv~p~~dggs~vkWt~~ye~~~~~~~~~e~~--~~~~~~~~~~KaiE~yLl 177 (201)
T 2vq5_A 100 VDNEHRLKKVQMIEGGYLDLGVTYYMDTIHVVPTGKDSCVIKSSTEYHVKPEFVKIVEPL--ITTGPLAAMADAISKLVL 177 (201)
T ss_dssp EETTTTEEEEEEEEEGGGGTTEEEEEEEEEEEEEETTEEEEEEEEEEEECGGGHHHHTTT--CCSHHHHHHHHHHHHHHH
T ss_pred EchhhCEEEEEEEecCccccceeEEEEEEEEEECCCCCeEEEEEEEEEECCCCCCCChhH--HHHHHHHHHHHHHHHHHH
Confidence 99999999999999973 7999999999999875 6999999999997644 1 1221 356778899999999997
Q ss_pred hh
Q 030202 170 AY 171 (181)
Q Consensus 170 ~~ 171 (181)
+.
T Consensus 178 an 179 (201)
T 2vq5_A 178 EH 179 (201)
T ss_dssp SC
T ss_pred hC
Confidence 75
No 21
>2le1_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative, unknown function; NMR {Thermobifida fusca}
Probab=99.93 E-value=5.4e-25 Score=165.65 Aligned_cols=135 Identities=19% Similarity=0.366 Sum_probs=111.1
Q ss_pred eEEEEEEeCCCHHHHHHHHhccCCcccccccceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCccceEEEEEEEEe
Q 030202 18 GRACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLAIN 97 (181)
Q Consensus 18 ~~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~~D 97 (181)
-..+++| +||+++||++++||.++++|+|.+.+|++.+|+++++|++|.+.+ + + | .+++|+|+.+|
T Consensus 4 v~~si~I-~ap~e~Vw~~l~d~~~~~~w~p~v~~~~~~~g~~~~~G~~r~~~~---~-~---G------~~~~e~i~~~d 69 (151)
T 2le1_A 4 LRRSVEV-AAPAADVWTLVGDFSAIHRWHPQVSAPTLRGASPHTPGAERVFGA---G-T---E------EELVERLVERD 69 (151)
T ss_dssp EEEEEEE-SSCHHHHHHHHTTSGGGGGTCTTCCCEEEESSCTTSTTCEEEESS---S-S---S------SCEEEEEEEEE
T ss_pred EEEEEEe-cCCHHHHHHHHhCcCcHHHhcCCceEEEEECCCCCCCCeEEEEEe---C-C---C------CEEEEEEEEEe
Confidence 3568899 999999999999999999999999999988776778999999875 1 2 3 17999999999
Q ss_pred cCCCeEEEEEeecccceeeEEEEEEEEEcC-CceEEEEEEEEee-CCCCCHHHH---HHHHHHHHHHHHHHHHH
Q 030202 98 AEEMTLTYSIVDGNVGFYGYVSTLTVAPKE-NGCYIEWKYEVEP-VKGWRLEDL---DCFISSGLQVMARRMKE 166 (181)
Q Consensus 98 ~~~~~~~y~v~~g~~p~~~~~~t~~v~p~~-~gT~v~W~~~~~p-~~~~~~~~~---~~~~~~gl~~l~~~le~ 166 (181)
+++++++|+++++++|++.|.++++|+|.+ +||+|+|+.+|+| ..+.....+ ...|+.+|++|++.+|+
T Consensus 70 ~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~gt~v~w~~~f~~~p~~~~~~~~~~~~~~~~~~L~~Lk~~~e~ 143 (151)
T 2le1_A 70 ESARRLVYTMPDPPFPITNHRAVLEVVPRDDRHCTVVWTAMFDCSPETARELESVIGDGVFAVGLNALAERYGR 143 (151)
T ss_dssp TTTTEEEEEEEECSSSEEEEEEEEEEEESSSSCEEEEEEEEEEECHHHHHHHHHHTTTTHHHHHHHHHHHHTTT
T ss_pred CCCCEEEEEEecCCCCceeEEEEEEEEECCCCcEEEEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 988999999999888899999999999964 5799999999997 222222222 45677778877776654
No 22
>2wql_A Major allergen DAU C 1; pathogenesis-related protein, plant defense; HET: P4C; 2.70A {Daucus carota} PDB: 2bk0_A
Probab=99.92 E-value=9e-24 Score=161.47 Aligned_cols=139 Identities=17% Similarity=0.180 Sum_probs=113.0
Q ss_pred EEEEEEeCCCHHHHHHH-HhccCCc-ccccccceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCccceEEEEEEEE
Q 030202 19 RACEELTGVKAEQIWAF-LEDFFGL-DKWFPTLTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLAI 96 (181)
Q Consensus 19 ~v~~~I~~Ap~e~VW~~-l~Df~~~-~~w~P~v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~~ 96 (181)
..++++ ++||+++|++ +.|++++ |+|+|.+.++..++|+ |++|++|.+++. .| | + ...++|||..+
T Consensus 7 ~~E~~~-~v~a~kl~ka~v~d~~~l~Pk~~P~~iks~~veGd-g~~Gsir~~t~~----~g--~---~-~~~~kErle~i 74 (154)
T 2wql_A 7 SLEITS-SVSAEKIFSGIVLDVDTVIPKAATGAYKSVEVKGD-GGAGTVRIITLP----EG--S---P-ITTMTVRTDAV 74 (154)
T ss_dssp EEEEEE-SSCHHHHHHHHTTTHHHHHHHHSTTTCSEEEEESS-SSTTCEEEEECC----TT--C---S-CCEEEEEEEEE
T ss_pred EEEEEe-cCCHHHHHHHHhhcccccchhhcccceeEEEEECC-CCCCeEEEEEEc----CC--C---C-ceEEEEEEEEE
Confidence 567888 9999999986 5899997 9999976666556775 579999999972 22 2 2 35899999999
Q ss_pred ecCCCeEEEEEeeccc---ceeeEEEEEEEEEcCC-ceEEEEEEEEeeCCCC--CHHHHHHHHHHHHHHHHHHHHHHHhh
Q 030202 97 NAEEMTLTYSIVDGNV---GFYGYVSTLTVAPKEN-GCYIEWKYEVEPVKGW--RLEDLDCFISSGLQVMARRMKEALQA 170 (181)
Q Consensus 97 D~~~~~~~y~v~~g~~---p~~~~~~t~~v~p~~~-gT~v~W~~~~~p~~~~--~~~~~~~~~~~gl~~l~~~le~~~~~ 170 (181)
|+++++++|++++|+. +++.|..+++|.|.++ ||.++|+.+|++..+. .++.+ ........+|.+.+|+||+|
T Consensus 75 D~~~~~~~y~iieGd~l~~~~~~~~~~ikv~p~~~ggsvvk~t~~Y~~~~~~~~~ee~~-~~~~~~~~~~~KaiEayLla 153 (154)
T 2wql_A 75 NKEALSYDSTVIDGDILLGFIESIETHMVVVPTADGGSITKTTAIFHTKGDAVVPEENI-KFADAQNTALFKAIEAYLIA 153 (154)
T ss_dssp ETTTTEEEEEEEESGGGTTTEEEEEEEEEEEECTTSCEEEEEEEEEEESTTCCCCHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred ehhhCEEEEEEEeccccccceEEEEEEEEEeeCCCCcEEEEEEEEEEECCCCCCCHHHH-HHHHHHHHhHHHHHHHHHhc
Confidence 9999999999999973 6999999999999987 5999999999987653 33333 33455567889999999875
No 23
>3tvq_A Multifunctional cyclase-dehydratase-3-O-methyl TR TCMN; tetracenomycin, aromatase, taxifolin, dihyroquercet helix-GRIP fold; HET: DQH; 1.67A {Streptomyces glaucescens} PDB: 2rer_A 2res_A 2rez_A
Probab=99.77 E-value=5.1e-17 Score=125.53 Aligned_cols=140 Identities=12% Similarity=0.180 Sum_probs=101.8
Q ss_pred eEEEEEEeCCCHHHHHHHHhccCCcccccccceeEEEecCCCCCCceEEEE-eeeecCCCCCCCCCcCccceEEEEEEEE
Q 030202 18 GRACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQGISGQPGCVRFC-AGFKTPVDNKDDDHEQSVNWTKQKLLAI 96 (181)
Q Consensus 18 ~~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~~~~~~~G~~~~vGsvR~~-~~~~~~~~g~~G~~~~~~~~~~Erl~~~ 96 (181)
-..++.| +||+++||+++.|+.+||+|+|.+..++++++++ +.+|.. .. .+..+ | . ...+..++. +
T Consensus 5 v~~si~I-~a~~~~v~~lv~Dv~~~p~w~p~~~~~~~~~~~~---~~~~~~l~~--~~~~~--G--~-~~~~ts~~~--~ 71 (169)
T 3tvq_A 5 TDNSIVV-NAPFELVWDVTNDIEAWPELFSEYAEAEILRQDG---DGFDFRLKT--RPDAN--G--R-VWEWVSHRV--P 71 (169)
T ss_dssp EEEEEEE-SSCHHHHHHHHTCGGGHHHHCTTEEEEEEEEEET---TEEEEEEEE--CCCTT--S--C-CCEEEEEEE--E
T ss_pred EEEEEEe-cCCHHHHHHHHHhhhHHHHHHhheeEEEEEecCC---CEEEEEEEE--EecCC--C--e-EEEEEEEEE--E
Confidence 4568889 9999999999999999999999999999876533 233332 11 01122 3 1 123444553 6
Q ss_pred ecCCCeEEEEEeecccceeeEEEEEEEEEcCCceEEEEEEEEeeCCC--CCH----HHHHHHHHHHHHHHHHHHHHHHhh
Q 030202 97 NAEEMTLTYSIVDGNVGFYGYVSTLTVAPKENGCYIEWKYEVEPVKG--WRL----EDLDCFISSGLQVMARRMKEALQA 170 (181)
Q Consensus 97 D~~~~~~~y~v~~g~~p~~~~~~t~~v~p~~~gT~v~W~~~~~p~~~--~~~----~~~~~~~~~gl~~l~~~le~~~~~ 170 (181)
|+..+++.|+.+... |++.|.++++|+|.++||+|+|..+|+..++ ... ..+...+..+|++|++.+|+...+
T Consensus 72 d~~~~~I~~~~l~~g-Pf~~~~g~W~f~p~~~gt~V~~~~df~~~~~~p~~~~~~~~av~~~~~~~L~~LK~~aE~~~~~ 150 (169)
T 3tvq_A 72 DKGSRTVRAHRVETG-PFAYMNLHWTYRAVAGGTEMRWVQEFDMKPGAPFDNAHMTAHLNTTTRANMERIKKIIEDRHRE 150 (169)
T ss_dssp EGGGTEEEEEESSCT-TEEEEEEEEEEEEETTEEEEEEEEEEEECTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcEEEEEEcCCC-ChhheeeEEEEEECCCCEEEEEEEEEEecCCCcccHHHHHHHHHhhHHHHHHHHHHHHhhhhhh
Confidence 787889999876544 8999999999999998899999988875422 222 233466888999999999987755
Q ss_pred h
Q 030202 171 Y 171 (181)
Q Consensus 171 ~ 171 (181)
+
T Consensus 151 ~ 151 (169)
T 3tvq_A 151 G 151 (169)
T ss_dssp H
T ss_pred c
Confidence 5
No 24
>3tl1_A WHIE ORF VI, polyketide cyclase; helix-GRIP fold, polyketide C9-C14 aromatase/cyclase, linear beta-ketone intermediate; HET: JRO; 1.80A {Streptomyces coelicolor} PDB: 3tvr_A 2kf2_A
Probab=99.75 E-value=1.6e-16 Score=121.59 Aligned_cols=139 Identities=10% Similarity=0.151 Sum_probs=100.5
Q ss_pred eEEEEEEeCCCHHHHHHHHhccCCcccccccceeEEEecCCCCCCceEEEE-eeeecCCCCCCCCCcCccceEEEEEEEE
Q 030202 18 GRACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQGISGQPGCVRFC-AGFKTPVDNKDDDHEQSVNWTKQKLLAI 96 (181)
Q Consensus 18 ~~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~~~~~~~G~~~~vGsvR~~-~~~~~~~~g~~G~~~~~~~~~~Erl~~~ 96 (181)
.+.++.| +|||++||+++.|+.+||+|+|.+..+++++.++ ..-..|.. .. ..+ | . ...+..++ .+
T Consensus 5 v~~si~I-~a~~~~V~~lV~Dve~yP~~~p~~~~~~vl~~~~-~~~~~rl~~~~----~~~--G--~-~~~~ts~~--~~ 71 (159)
T 3tl1_A 5 TDNEITI-AAPMELVWNMTNDIEKWPGLFSEYASVEVLGRDD-DKVTFRLTMHP----DAD--G--K-VWSWVSER--VA 71 (159)
T ss_dssp EEEEEEE-SSCHHHHHHHHTCGGGHHHHCSSEEEEEEEEECS-SEEEEEEEECC----CTT--S--C-CCEEEEEE--EE
T ss_pred eEEEEEe-cCCHHHHHHHHHhHHHhhhhhhCceEEEEEecCC-CEEEEEEEEEe----ccC--c--e-EEEEEEEE--EE
Confidence 4568889 9999999999999999999999999999876432 22244433 01 012 3 1 12233444 47
Q ss_pred ecCCCeEEEEEeecccceeeEEEEEEEEEcCCceEEEEEEEEeeCCC--CCH----HHHHHHHHHHHHHHHHHHHHHHhh
Q 030202 97 NAEEMTLTYSIVDGNVGFYGYVSTLTVAPKENGCYIEWKYEVEPVKG--WRL----EDLDCFISSGLQVMARRMKEALQA 170 (181)
Q Consensus 97 D~~~~~~~y~v~~g~~p~~~~~~t~~v~p~~~gT~v~W~~~~~p~~~--~~~----~~~~~~~~~gl~~l~~~le~~~~~ 170 (181)
|+.++++.|+.+... |++.+.++++|+|.++||+|+|..+|+...+ ... +.+...+...|++|++.+|+...+
T Consensus 72 d~~~~~I~~~~~~~g-Pf~~l~g~W~f~p~~~gt~V~~~~df~~~~~~p~~~~~~~~~~~~~~~~~L~~lK~~~E~~~~~ 150 (159)
T 3tl1_A 72 DPVTRTVRAQRVETG-PFQYMNIVWEYAETAEGTVMRWTQDFAMKPDAPVDDAWMTDNINRNSRTQMALIRDRIEQAAGE 150 (159)
T ss_dssp ETTTTEEEEEESSCT-TEEEEEEEEEEEEETTEEEEEEEEEEEECTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEEEccCC-ChhhccCEEEEEECCCCEEEEEEEEEEecCCCCCCHHHHHHHHHhhHHHHHHHHHHHHhhhhhh
Confidence 888889999987433 7899999999999988999999988875432 222 233456777889999988876543
No 25
>2d4r_A Hypothetical protein TTHA0849; start domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.40A {Thermus thermophilus} SCOP: d.129.3.6
Probab=99.72 E-value=4.7e-16 Score=113.24 Aligned_cols=137 Identities=11% Similarity=0.112 Sum_probs=95.1
Q ss_pred eEEEEEEeCCCHHHHHHHHhccCCcccccccceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCccceEEEEEEEEe
Q 030202 18 GRACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLAIN 97 (181)
Q Consensus 18 ~~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~~D 97 (181)
-..+++| +||+++||+++.|+.++++|+|.+.+++.+++.++ |....+... . + | .. .....+++..+
T Consensus 4 ~~~~~~i-~ap~~~V~~~l~d~~~~~~w~p~~~~~~~~~~~~~--g~~~~~~~~-~---~--g--~~--~~~~~~~~~~~ 70 (147)
T 2d4r_A 4 VRAERYI-PAPPERVYRLAKDLEGLKPYLKEVESLEVVAREGA--RTRSRWVAV-A---M--G--KK--VRWLEEEEWDD 70 (147)
T ss_dssp EEEEEEE-SSCHHHHHHHHHCHHHHGGGCTTEEEEEEEEEETT--EEEEEEEEE-E---T--T--EE--EEEEEEEEEET
T ss_pred EEEEEEe-CCCHHHHHHHHhChhhhhhhcccccEEEEEEeCCC--ccEEEEEEE-e---C--C--ce--EEEEEEEEEcC
Confidence 3568889 99999999999999999999999988877654322 433333321 1 1 2 11 13455565554
Q ss_pred cCCCeEEEEEeecccceeeEEEEEEEEEcCCceEEEEEEEEeeCCCC----CHHHHHHHHHHHHHHHHHHHHHHHhh
Q 030202 98 AEEMTLTYSIVDGNVGFYGYVSTLTVAPKENGCYIEWKYEVEPVKGW----RLEDLDCFISSGLQVMARRMKEALQA 170 (181)
Q Consensus 98 ~~~~~~~y~v~~g~~p~~~~~~t~~v~p~~~gT~v~W~~~~~p~~~~----~~~~~~~~~~~gl~~l~~~le~~~~~ 170 (181)
.++++.|++.+|++ ..+.++++|+|.++||+|+|++++++..+. ....+...++.+++.+.+.|++++++
T Consensus 71 -~~~~i~~~~~~g~~--~~~~~~~~~~~~~~gT~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lk~~~e~ 144 (147)
T 2d4r_A 71 -ENLRNRFFSPEGDF--DRYEGTWVFLPEGEGTRVVLTLTYELTIPIFGGLLRKLVQKLMQENVESLLKGLEERVLA 144 (147)
T ss_dssp -TTTEEEEEEEEESC--SEEEEEEEEEECSSSEEEEEEEEEECCCTTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCcEEEEEeccCCh--hheEEEEEEEECCCCcEEEEEEEEecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 47899999987754 667889999999889999999999975322 12223345566666666666666654
No 26
>3tfz_A Cyclase; helix-GRIP, BET V1-like superfamily, biosynthetic protein; HET: CXS; 2.39A {Streptomyces SP}
Probab=99.71 E-value=8.6e-16 Score=118.10 Aligned_cols=137 Identities=12% Similarity=0.123 Sum_probs=94.8
Q ss_pred eEEEEEEeCCCHHHHHHHHhccCCcccccccceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCccceEEEEEEEEe
Q 030202 18 GRACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLAIN 97 (181)
Q Consensus 18 ~~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~~D 97 (181)
-..+++| +||+++||+++.|+++||+|+|.+.+++++++.++.. ..|.... .+ | . ......++ .+|
T Consensus 7 v~~si~I-~ap~~~V~~~v~D~~~~p~~~P~~~~~~v~~~~~~~~-~~~~~~~-----~~--G--~--~~~~~s~~-~~~ 72 (172)
T 3tfz_A 7 VEHTVTV-AAPADLVWEVLADVLGYADIFPPTEKVEILEEGQGYQ-VVRLHVD-----VA--G--E--INTWTSRR-DLD 72 (172)
T ss_dssp EEEEEEE-SSCHHHHHHHHHCGGGHHHHCSSEEEEEEEEEETTEE-EEEEEEE-----ET--T--E--EEEEEEEE-EEE
T ss_pred EEEEEEe-CCCHHHHHHHHHhHHHHHhhCcccceEEEEecCCCEE-EEEEEEe-----cC--C--E--EEEEEEEE-EEe
Confidence 3568889 9999999999999999999999999998876533221 2333321 12 3 1 11223333 367
Q ss_pred cCCCeEEEEEeecccceeeEEEEEEEEEcC-CceEEEEEEEEeeCCCC---------C-H---HHH----HHHHHHHHHH
Q 030202 98 AEEMTLTYSIVDGNVGFYGYVSTLTVAPKE-NGCYIEWKYEVEPVKGW---------R-L---EDL----DCFISSGLQV 159 (181)
Q Consensus 98 ~~~~~~~y~v~~g~~p~~~~~~t~~v~p~~-~gT~v~W~~~~~p~~~~---------~-~---~~~----~~~~~~gl~~ 159 (181)
+..+++.|+.++++.|++.+.++++|.|.+ ++|+|+|+.+|+..... . + ..+ ..-++..|+.
T Consensus 73 ~~~~~i~~~~~~~~gpf~~~~g~w~f~~~~~~~t~V~~~~~~~~~~~~l~~~lg~~~~~~~~~~~~~~~l~~~~~~~L~~ 152 (172)
T 3tfz_A 73 PARRVIAYRQLETAPIVGHMSGEWRAFTLDAERTQLVLTHDFVTRAAGDDGLVAGKLTPDEAREMLEAVVERNSVADLNA 152 (172)
T ss_dssp TTTTEEEEEEEECCTTEEEEEEEEEEEEEETTEEEEEEEEEEEECCCCTTSSBTTTBCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEeeCCCChhhcEEEEEEEECCCCcEEEEEEEEEEEcChhHHHhhccccCchhhHHHHHHHHhcccHHHHHH
Confidence 777899999997666889999999999986 57999999998854321 0 1 112 2334556777
Q ss_pred HHHHHHHHH
Q 030202 160 MARRMKEAL 168 (181)
Q Consensus 160 l~~~le~~~ 168 (181)
|++.+|++.
T Consensus 153 lk~~aE~~~ 161 (172)
T 3tfz_A 153 VLGEAERRV 161 (172)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777777654
No 27
>3ijt_A SMU.440, putative uncharacterized protein; hypothetical protein, unknown function; 2.38A {Streptococcus mutans} SCOP: d.129.3.9 PDB: 2b79_A
Probab=99.69 E-value=1.4e-15 Score=115.82 Aligned_cols=134 Identities=10% Similarity=0.016 Sum_probs=95.6
Q ss_pred CCeeeEEEEEEeCCCHHHHHHHHhccCCcccccccceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCccceEEEEE
Q 030202 14 PKWQGRACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKL 93 (181)
Q Consensus 14 ~~w~~~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl 93 (181)
.-|+=+.+++| +|||++||+++.||.++++|.|.+.++.. +|+ -.+|+.+.+.. .+ | ..+.++|
T Consensus 16 ~~~~i~~si~I-~Appe~VW~~ltD~~~~~~W~p~v~~~~~-~G~-~~~G~~~~~~~-----~~--~------~~~~~~v 79 (155)
T 3ijt_A 16 GSMKFSFELAV-NTKKEDAWTYYSQVNQWFVWEGDLEQISL-EGE-FTTGQKGKMKM-----ED--M------PELAFTL 79 (155)
T ss_dssp CCEEEEEEEEE-SSCHHHHHHHHHCGGGGGGTSTTEEEEEE-SSS-SSTTCEEEEEE-----TT--S------CCEEEEE
T ss_pred CcEEEEEEEEE-cCCHHHHHHHHhCcccccccchhhEeeec-cCC-CCCCCEEEEEe-----CC--C------CcEEEEE
Confidence 36778889999 99999999999999999999999887764 553 47898877764 22 2 1688899
Q ss_pred EEEecCCCeEEEEEeecccceeeEEEEEEEEEcC-CceEEEEEEEEeeCCCCCHHH--HHHHHHHHHHHHHHHHHHHH
Q 030202 94 LAINAEEMTLTYSIVDGNVGFYGYVSTLTVAPKE-NGCYIEWKYEVEPVKGWRLED--LDCFISSGLQVMARRMKEAL 168 (181)
Q Consensus 94 ~~~D~~~~~~~y~v~~g~~p~~~~~~t~~v~p~~-~gT~v~W~~~~~p~~~~~~~~--~~~~~~~gl~~l~~~le~~~ 168 (181)
+++++ +++|+|+.. +|+..+..+++|+|.+ ++|+|+|+.+|.... ..+.. +...+..+++...++|++++
T Consensus 80 ~~~~p-~~~~~~~~~---~p~~~~~~~h~l~p~~~ggTrvt~~~~~~G~~-~~~~~~~~~~~i~~~~~~~l~~LK~~a 152 (155)
T 3ijt_A 80 VEVRE-NQCFSDLTA---TPFGNVLFEHEILENPDGTISLRHSVSLTDSD-TTEEALAFLKQIFADVPESVGKLKQIL 152 (155)
T ss_dssp CCCBT-TTEEEEEEE---ETTEEEEEEEEEEECTTSCEEEEEEEEESCCS-CCHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred EEEeC-CcEEEEEEe---cCCeEEEEEEEEEEcCCCcEEEEEEEEEECCC-cchhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99998 568999743 4445667788999975 579999999996321 11212 22334444444444444444
No 28
>1vjh_A BET V I allergen family; structural genomics, center for eukaryotic structural genomics, protein structure initiative, CESG, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.129.3.1 PDB: 2q3q_A
Probab=99.67 E-value=3.5e-15 Score=109.44 Aligned_cols=107 Identities=13% Similarity=0.238 Sum_probs=86.1
Q ss_pred EEEEEEeCCCHHHHHHHHhccCCcccccccceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCccceEEEEEEEEec
Q 030202 19 RACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLAINA 98 (181)
Q Consensus 19 ~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~~D~ 98 (181)
..+++| ++||+++|+++.+++.+| |.+ + + . . ||.++|+
T Consensus 8 ~~e~~i-~~~a~k~w~~~~~~~~~p-~g~--------------~-------G---------~-------~---~ie~iD~ 45 (122)
T 1vjh_A 8 SVKFDV-KCPADKFFSAFVEDTNRP-FEK--------------N-------G---------K-------T---EIEAVDL 45 (122)
T ss_dssp EEEEEE-SSCHHHHHHHHHHHTTSC-SST--------------T-------C---------E-------E---EEEEEET
T ss_pred EEEEEe-cCCHHHHHHHHhhcccCC-ccC--------------C-------C---------c-------c---EEEEEec
Confidence 357888 999999999999986666 311 1 1 1 2 8899999
Q ss_pred CCCeEEEEEeecccc--eeeEEEEEEEEEc--CCceEEEEEEEEeeCCCC--CHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 030202 99 EEMTLTYSIVDGNVG--FYGYVSTLTVAPK--ENGCYIEWKYEVEPVKGW--RLEDLDCFISSGLQVMARRMKEALQAY 171 (181)
Q Consensus 99 ~~~~~~y~v~~g~~p--~~~~~~t~~v~p~--~~gT~v~W~~~~~p~~~~--~~~~~~~~~~~gl~~l~~~le~~~~~~ 171 (181)
++++++|++++|+++ ++.|..+++|.|. ++||.++|+.+|+...+. .++.+ ...+..|.+.+|+|+++.
T Consensus 46 ~~~~~~y~iieGd~~~~~~~~~~~~~v~~~~~~~gs~vkwt~~ye~~~~~~~~p~~~----~~~~~~~~k~ie~yll~~ 120 (122)
T 1vjh_A 46 VKKTMTIQMSGSEIQKYFKTLKGSIAVTPIGVGDGSHVVWTFHFEKVHKDIDDPHSI----IDESVKYFKKLDEAILNF 120 (122)
T ss_dssp TTTEEEEEEECTTGGGTEEEEEEEEEEEECSSSSCEEEEEEEEEEESSTTSCCSHHH----HHHHHHHHHHHHHHHHHC
T ss_pred ccCEEEEEEEEccccccEEEEEEEEEEEEecCCCCeEEEEEEEEEECCCCCCCHHHH----HHHHHHHHHHHHHHHhhC
Confidence 999999999999874 8999999999998 568999999999976543 33333 456678999999999874
No 29
>1t17_A Conserved hypothetical protein; beta-alpha-beta-BETA-beta-BETA-beta-BETA-helix, structural G protein structure initiative, PSI, NESG; NMR {Caulobacter crescentus} SCOP: d.129.3.6
Probab=99.61 E-value=2.4e-14 Score=106.82 Aligned_cols=138 Identities=12% Similarity=0.058 Sum_probs=96.2
Q ss_pred eEEEEEEeCCCHHHHHHHHhccCCcccccccceeEEEecCCC-CC-CceEEEEeeeecCCCCCCCCCcCccceEEEEEEE
Q 030202 18 GRACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQGIS-GQ-PGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLA 95 (181)
Q Consensus 18 ~~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~~~~~~~G~~-~~-vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~ 95 (181)
-+.+++| +||+++||+++.|+.++|+|+|.+.++++++..+ ++ -+....+... .+ | . ......+++
T Consensus 4 ~~~s~~i-~ap~~~v~~~v~D~~~~p~~~p~~~~~~v~~~~~~~g~~~~~~~~~~~----~~--~--~--~~~~~~~v~- 71 (148)
T 1t17_A 4 HVVTKVL-PYTPDQLFELVGDVDAYPKFVPWITGMRTWNGRVDGAVSTVDAEAQVG----FS--F--L--REKFATRVR- 71 (148)
T ss_dssp EEEEEEE-SSCTHHHHHHHTTTTCCSSCCSSCCCCCEEEEEEETTEEEEEEEEECS----TT--S--S--CCEEEEEEE-
T ss_pred EEEEEEe-cCCHHHHHHHHHHHhhHHhhCCCcCeeEEEEecCCCCCceEEEEEEEE----ec--c--e--eEEEEEEEE-
Confidence 3568889 9999999999999999999999999888765221 11 1222222221 11 2 1 124555666
Q ss_pred EecCCCeEEEEEeecccceeeEEEEEEEEEcCCceEEEEEEEEeeCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Q 030202 96 INAEEMTLTYSIVDGNVGFYGYVSTLTVAPKENGCYIEWKYEVEPVKGWRLEDLDCFISSGLQVMARRMKEALQ 169 (181)
Q Consensus 96 ~D~~~~~~~y~v~~g~~p~~~~~~t~~v~p~~~gT~v~W~~~~~p~~~~~~~~~~~~~~~gl~~l~~~le~~~~ 169 (181)
+++.++++.++.++|+ ++.+.+.++|+|.++||+|++..+|++..+.....+..++...++.|.+.+++++.
T Consensus 72 ~~~~~~~i~~~~~~G~--f~~~~g~w~f~~~~~gt~v~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~f~~r~~ 143 (148)
T 1t17_A 72 RDKDARSIDVSLLYGP--FKRLNNGWRFMPEGDATRVEFVIEFAFKSALLDAMLAANVDRAAGKLIACFEARAQ 143 (148)
T ss_dssp EETTTCEEEEEESSTT--SSCEEEEEEEEEETTEEEEEEEEEECCSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EcCCCcEEEEEECCCC--hhccEEEEEEEECCCCeEEEEEEEEEECcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5776669999999874 67789999999998889999999999763221222345567777777777777664
No 30
>2pcs_A Conserved protein; structural genomics, unknown function, ligand binding, PSI-2 structure initiative; HET: UNL; 2.40A {Geobacillus kaustophilus} SCOP: d.129.3.10
Probab=99.51 E-value=1.5e-13 Score=103.54 Aligned_cols=144 Identities=15% Similarity=0.068 Sum_probs=89.5
Q ss_pred eEEEEEEeCCCHHHHHHHHhccCCcccccccceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCccceE--EEEEEE
Q 030202 18 GRACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWT--KQKLLA 95 (181)
Q Consensus 18 ~~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~--~Erl~~ 95 (181)
=..+++| +||+++||+++.|+.++++|+|.+.+++...++. ....+.. + .+ + . ...+ +-++++
T Consensus 5 i~~~~~i-~ap~e~Vw~~l~D~e~~~~w~p~~~~~~~~~~~~----~~~~~~~---~-~g--~--~--~~~~~~~~~~~~ 69 (162)
T 2pcs_A 5 GNGSIEL-KGTVEEVWSKLMDPSILSKCIMGCKSLELIGEDK----YKADLQI---G-IA--A--V--KGKYDAIIEVTD 69 (162)
T ss_dssp EEEEEEE-ESCHHHHHHHHTCHHHHHHHSTTEEEEEEEETTE----EEEEEEE---C-CG--G--G--CEEEEEEEEEEE
T ss_pred EeeEEEe-cCCHHHHHHHhcCHHHHHhhCCCceEeEEeCCCe----EEEEEEE---E-ee--e--E--EEEEEEEEEEEe
Confidence 3567889 9999999999999999999999987777654321 1112221 0 11 1 0 0123 346677
Q ss_pred EecCCCeEEEEEee-cccceeeEEEEEEEEEc-CCceEEEEEEEEeeCCC---CCH----HHHHHHHHHHHHHHHHHHHH
Q 030202 96 INAEEMTLTYSIVD-GNVGFYGYVSTLTVAPK-ENGCYIEWKYEVEPVKG---WRL----EDLDCFISSGLQVMARRMKE 166 (181)
Q Consensus 96 ~D~~~~~~~y~v~~-g~~p~~~~~~t~~v~p~-~~gT~v~W~~~~~p~~~---~~~----~~~~~~~~~gl~~l~~~le~ 166 (181)
+++ ++++.++... +..+.....++++|+|. ++||+|+|+.++++... ... ...+.++...+++|++.+|+
T Consensus 70 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~gT~v~~~~~~~~~g~l~~~~~~l~~~~~~~~~~~~~~~lk~~~e~ 148 (162)
T 2pcs_A 70 IKP-PYHYKLLVNGEGGPGFVNAEGVIDLTPINDECTQLTYTYSAEVGGKVAAIGQRMLGGVAKLLISDFFKKIQKEIAK 148 (162)
T ss_dssp EET-TTEEEEEEEEEETTEEEEEEEEEEEEESSSSEEEEEEEEEEEEESGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCC-CcEEEEEEEecCCCccEEEEEEEEEEecCCCcEEEEEEEEEEECCCHHHhhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 787 4677776652 22344557889999994 45799999988885321 111 12245677778888888888
Q ss_pred HHhhhhhhccc
Q 030202 167 ALQAYEVIMHY 177 (181)
Q Consensus 167 ~~~~~~~~~~~ 177 (181)
....|+++-|.
T Consensus 149 ~~~~~~~~~~~ 159 (162)
T 2pcs_A 149 SKQEASEGHHH 159 (162)
T ss_dssp C-------CEE
T ss_pred cCccccccccc
Confidence 77777777663
No 31
>3ggn_A Uncharacterized protein DR_A0006; structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 2.00A {Deinococcus radiodurans R1} PDB: 2kcz_A
Probab=99.46 E-value=3.6e-12 Score=96.05 Aligned_cols=107 Identities=18% Similarity=0.226 Sum_probs=76.8
Q ss_pred EEEEEEeCCCHHHHHHHHhccCCcccccccceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCccceEEEEEEEEec
Q 030202 19 RACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLAINA 98 (181)
Q Consensus 19 ~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~~D~ 98 (181)
..+++| +||+++||+++.|+.++|+|+|.+.+++.+++ |..+...- .+ . | .. .....-+++.+++
T Consensus 7 ~~s~~I-~ap~e~V~~~~~D~e~~p~w~p~~~~v~~~~~-----~~~~~~~~--~~-~---G--~~-~~~~~~~v~e~~p 71 (155)
T 3ggn_A 7 RDAVTI-GKPAEQLYAVWRDLPGLPLLMTHLRSVEVLDD-----KRSRWTVE--AP-A---P--LG-TVSWEAELTADEP 71 (155)
T ss_dssp EEEEEE-SSCHHHHHHHHHCGGGHHHHSTTCCEEEECSS-----SEEEEEEE--CC-T---T--TC-EEEEEEEEEEEET
T ss_pred EEEEEE-cCCHHHHHHHHhCHHHhHHHhhhceEEEEecC-----CeeEEEEE--ec-C---C--cc-eEEEEEEEEEecC
Confidence 568889 99999999999999999999999998887654 22333221 11 1 2 01 1145677787776
Q ss_pred CCCeEEEEEeecccceeeEEEEEEEEEc-CC-ceEEEEEEEEeeCCC
Q 030202 99 EEMTLTYSIVDGNVGFYGYVSTLTVAPK-EN-GCYIEWKYEVEPVKG 143 (181)
Q Consensus 99 ~~~~~~y~v~~g~~p~~~~~~t~~v~p~-~~-gT~v~W~~~~~p~~~ 143 (181)
++++.|+..+|+. ..+.++++|.+. ++ ||+|+++++|+|..+
T Consensus 72 -~~~i~~~~~~g~~--~~~~g~~~F~~~~~~~gT~V~~~~~~~~~~~ 115 (155)
T 3ggn_A 72 -GKRIAWRSLPGAR--IENSGEVLFRPAPGARGTEVVVRLTYRPPGG 115 (155)
T ss_dssp -TTEEEEEECTTCS--SCEEEEEEEEECSSSSCEEEEEEEEEC----
T ss_pred -CCEEEEEECCCCC--cceEEEEEEEECCCCCceEEEEEEEEECCCc
Confidence 6899999988853 346778899998 44 799999999997643
No 32
>2ns9_A Hypothetical protein APE2225; uncharacterized conserved protein, structural genomics, PSI, structure initiative; 1.80A {Aeropyrum pernix} SCOP: d.129.3.10
Probab=99.45 E-value=1.2e-11 Score=92.06 Aligned_cols=136 Identities=13% Similarity=0.154 Sum_probs=86.2
Q ss_pred EEEEEEeCCCHHHHHHHHhccCCcccccccceeEEEecCCCCCCceEEE-EeeeecCCCCCCCCCcCccceEEEEEEEEe
Q 030202 19 RACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQGISGQPGCVRF-CAGFKTPVDNKDDDHEQSVNWTKQKLLAIN 97 (181)
Q Consensus 19 ~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~~~~~~~G~~~~vGsvR~-~~~~~~~~~g~~G~~~~~~~~~~Erl~~~D 97 (181)
..+++| +||+++||+++.|+.++++|+|.+.+.+ ..|+ ..+. +... .+ + ....-..+-++++++
T Consensus 16 ~~~~~i-~ap~e~Vw~~l~D~~~~~~w~p~~~~~~-~~~~-----~~~~~~~~~----~g--~--~~~~~~~~~~~~~~~ 80 (157)
T 2ns9_A 16 EGSFEV-SKTPEEVFEFLTDPKRFSRAFPGFKSVE-VEDG-----SFTIELRLS----LG--P--LRGDARVRASFEDLE 80 (157)
T ss_dssp EEEEEE-SSCHHHHHHHHTCHHHHGGGSTTEEEEE-EETT-----EEEEEEEEE----SS--S--SEEEEEEEEEEEEEE
T ss_pred eeEEEE-cCCHHHHHHHHcCHHHHHhhCCCceEEE-ECCC-----EEEEEEEEE----Ec--c--eeEEEEEEEEEEecC
Confidence 456788 9999999999999999999999987666 4331 1222 1210 11 1 000002233555777
Q ss_pred cCCCeEEEEEee-cc-cceeeEEEEEEEEEcCCceEEEEEEEEeeC---CCCCHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 030202 98 AEEMTLTYSIVD-GN-VGFYGYVSTLTVAPKENGCYIEWKYEVEPV---KGWRLEDLDCFISSGLQVMARRMKEALQAY 171 (181)
Q Consensus 98 ~~~~~~~y~v~~-g~-~p~~~~~~t~~v~p~~~gT~v~W~~~~~p~---~~~~~~~~~~~~~~gl~~l~~~le~~~~~~ 171 (181)
+ ++++.|+... +. .++. +..+++|+|.++||+|+|+.+++.. .......+....+..++.+.++|++.+++|
T Consensus 81 ~-~~~i~~~~~~~~~~~~~~-~~~~~~l~~~~~gT~v~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~lk~~~e~~ 157 (157)
T 2ns9_A 81 K-PSKATVKGSGRGAGSTLD-FTLRFAVEPSGGGSRVSWVFEGNVGGLAASMGGRVLDSLARRMINDVISGVKRELGEA 157 (157)
T ss_dssp T-TTEEEEEEEEECSSEEEE-EEEEEEEEEETTEEEEEEEEEEEEEEGGGGSCHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred C-CcEEEEEEEecCCCccEE-EEEEEEEEeCCCcEEEEEEEEEEECcCHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 6 5688886442 22 2344 6789999999888999999887642 222333345556666677777777766543
No 33
>3p9v_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.78A {Marinobacter aquaeolei}
Probab=99.30 E-value=6.9e-11 Score=89.72 Aligned_cols=139 Identities=12% Similarity=0.124 Sum_probs=89.2
Q ss_pred eEEEEEEeCCCHHHHHHHHhccCCcccccccceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCccceEEEEEEEEe
Q 030202 18 GRACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLAIN 97 (181)
Q Consensus 18 ~~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~~D 97 (181)
-+.+++| +||+++||+++.|+++|+.|.|........ ++ |..|...- ... .| + .........++ .++
T Consensus 9 v~~s~~I-~ap~e~v~~lv~Dve~w~~~yp~~~p~~~~-~~----~~~~~~~a-~l~-vg--~--~~~~~~~~s~~-~~~ 75 (161)
T 3p9v_A 9 LNRDLEI-PASYDEVFDLLADVPKSASHFPKVDKLVDL-GN----NAYRWEME-KVG-VD--K--HAIQSVYACTY-HAD 75 (161)
T ss_dssp EEEEEEE-SSCHHHHHHHHTCHHHHHTTSTTEEEEEEE-ET----TEEEEEEC-CBS-SG--G--GCBCCEEEEEE-EEE
T ss_pred EEEEEEE-cCCHHHHHHHHhChhhhHhhCCCeEEEEEc-CC----CceEEEEE-EEe-ee--e--EEEEEEEEEEE-EEc
Confidence 3567888 999999999999999955555543322222 21 22222210 001 12 1 10001233333 356
Q ss_pred cCCCeEEEEEeecccceeeEEEEEEEEEcCCc-eEEEEEEEEeeC---CCCCHHHHHHHHHHHHHHHHHHHHHHHhh
Q 030202 98 AEEMTLTYSIVDGNVGFYGYVSTLTVAPKENG-CYIEWKYEVEPV---KGWRLEDLDCFISSGLQVMARRMKEALQA 170 (181)
Q Consensus 98 ~~~~~~~y~v~~g~~p~~~~~~t~~v~p~~~g-T~v~W~~~~~p~---~~~~~~~~~~~~~~gl~~l~~~le~~~~~ 170 (181)
++++++.|+.++|++ .+...++++|+|.++| |+|+|.++|++. .+.....+..+++..++.|.+.+++++.+
T Consensus 76 ~~~~~I~~~~~~g~~-~~~l~g~w~f~p~~~g~t~V~~~~~~e~~~pl~~ll~~~~~~~~~~~~~~~v~af~~ra~~ 151 (161)
T 3p9v_A 76 KEAGKITWSPIKGEG-NGVVSGSWTLSAKGDNATAVKFQTSAELTVPLPSLLKLAISPVIKHEFNSLVDTYMANLKK 151 (161)
T ss_dssp TTTTEEEEEECTTST-TEEEEEEEEEEESSSSCEEEEEEEEEEEEECSCGGGHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEEEecCcc-ceeEEEEEEEEECCCCeEEEEEEEEEEEcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 667899999997754 2667889999999887 999999999864 44434445677888888888888887654
No 34
>2leq_A Uncharacterized protein; start domains, structural genomics, PSI-biology, protein STR initiative; NMR {Cytophaga hutchinsonii}
Probab=99.21 E-value=6.7e-10 Score=81.11 Aligned_cols=133 Identities=15% Similarity=0.121 Sum_probs=85.2
Q ss_pred eeEEEEEEeCCCHHHHHHHHhccCCcccccccceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCccceEEEEEEEE
Q 030202 17 QGRACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLAI 96 (181)
Q Consensus 17 ~~~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~~ 96 (181)
.=..+++| +||+++||+++.|+..+++|++.. .+. ++ -.+|....+.. + .+ | . ...+..+++++
T Consensus 6 ~i~~~~~i-~ap~e~Vw~~ltd~~~~~~W~~~~-~~~---~~-~~~G~~~~~~~---~-~~--g--~--~~~~~~~v~~~ 69 (146)
T 2leq_A 6 IAQVKTVI-NAPIEKVWEALVNPEIIKEYMFGT-TVV---SD-WKEGSQIVWKG---E-WK--G--K--AYEDKGTILQF 69 (146)
T ss_dssp EEEEEEEE-CSCHHHHHHHHSCTTHHHHHSSSC-EEE---CC-CSTTCEEEEEE---E-ET--T--E--EEEEEEEEEEE
T ss_pred eEEEEEEE-CCCHHHHHHHHcCHHHhceeEcCC-cce---ec-cCCCCEEEEEe---c-CC--C--c--eecccEEEEEE
Confidence 34678899 999999999999999999996322 121 11 12443333332 1 12 2 1 11467889999
Q ss_pred ecCCCeEEEEEeeccc-----ceeeEEEEEEEEEcCCceEEEEEEEEeeCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 030202 97 NAEEMTLTYSIVDGNV-----GFYGYVSTLTVAPKENGCYIEWKYEVEPVKGWRLEDLDCFISSGLQVMARRMKEALQAY 171 (181)
Q Consensus 97 D~~~~~~~y~v~~g~~-----p~~~~~~t~~v~p~~~gT~v~W~~~~~p~~~~~~~~~~~~~~~gl~~l~~~le~~~~~~ 171 (181)
++ ++++.|+...... +......+++|+|.++||+|+++.+..+.. .....+..+.+.+...|+++++++
T Consensus 70 ~p-~~~l~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~gT~l~~~~~~~~~~-----~~~~~~~~gw~~~l~~Lk~~le~~ 143 (146)
T 2leq_A 70 NE-RSILQYSHFSPLTGKPDLPENYHVVTITLTALKKGVEVELTQDNNETE-----KEQKHSEDNWNTMLEGLKKFLENK 143 (146)
T ss_dssp ET-TTEEEEECBCGGGCCCSCGGGSCEEEEEEEECSSCEEEEEEEEEESSH-----HHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred cC-CCEEEEEEccCccCCCCCCCCceEEEEEEEEcCCCeEEEEEEecCCch-----hhHhhHHhhHHHHHHHHHHHHhcc
Confidence 98 6788888653211 122467889999998899999997654421 233445666666666666666543
No 35
>1z94_A Conserved hypothetical protein; NESG, CV1439, structural genomics, PSI structure initiative; 2.10A {Chromobacterium violaceum} SCOP: d.129.3.5
Probab=99.20 E-value=8e-10 Score=81.01 Aligned_cols=135 Identities=17% Similarity=0.208 Sum_probs=83.5
Q ss_pred EEEEEEeCCCHHHHHHHHhccCCcccccccc-eeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCccceEEEEEEEEe
Q 030202 19 RACEELTGVKAEQIWAFLEDFFGLDKWFPTL-TTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLAIN 97 (181)
Q Consensus 19 ~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v-~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~~D 97 (181)
.++++| +||+++||+++.|...+++|++.- ..+...+.+ -.+|....+.....+ + | . ...+.-++++++
T Consensus 6 ~~~~~i-~ap~e~Vw~altd~~~~~~W~~~~~~~~~~~~~~-~~~Gg~~~~~~~~~~-~---g--~--~~~~~~~v~~~~ 75 (147)
T 1z94_A 6 RLHRVL-SAPPERVYRAFLDPLALAKWLPPEGFVCKVLEHD-ARVGGAYKMEFLAFA-S---G--Q--KHAFGGRYLELV 75 (147)
T ss_dssp EEEEEE-SSCHHHHHHHTTCHHHHHHHSSCTTEEEEEEEEC-CSTTCEEEEEEEETT-T---C--C--EEEEEEEEEEEE
T ss_pred EEEEEe-CCCHHHHHHHhCCHHHHhhccCCCCEeeeEEEEc-cCCCcEEEEEEEECC-C---C--C--EEEEEEEEEEEc
Confidence 567889 999999999999999999999732 122222221 234543333221011 1 2 1 125678899999
Q ss_pred cCCCeEEEEEeecccce-eeEEEEEEEEEcCCceEEEEEEEEeeCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Q 030202 98 AEEMTLTYSIVDGNVGF-YGYVSTLTVAPKENGCYIEWKYEVEPVKGWRLEDLDCFISSGLQVMARRMKEALQ 169 (181)
Q Consensus 98 ~~~~~~~y~v~~g~~p~-~~~~~t~~v~p~~~gT~v~W~~~~~p~~~~~~~~~~~~~~~gl~~l~~~le~~~~ 169 (181)
+ ++++.|+...+..+. .....+++|+|.++||+|+++..+.|.. ...+. ...|.+.+..+|++++.
T Consensus 76 p-~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~gT~l~~~~~~~~~~-~~~~~----~~~gw~~~L~~L~~~le 142 (147)
T 1z94_A 76 P-GERIRYTDRFDDAGLPGDMITTITLAPLSCGADLSIVQEGIPDA-IPPEN----CYLGWQQSLKQLAALVE 142 (147)
T ss_dssp T-TTEEEEEEEESCCC---CEEEEEEEEEETTEEEEEEEEECCCTT-SCHHH----HHHHHHHHHHHHHHHHS
T ss_pred C-CCEEEEEEEEeCCCCCCcEEEEEEEEecCCCEEEEEEEEcCCch-hhHHH----HHHHHHHHHHHHHHHHH
Confidence 8 678999876542211 1457889999998899999998876532 22333 34444455555555543
No 36
>2qpv_A Uncharacterized protein ATU1531; structural genomics, PSI protein structure initiative, midwest center for structural genomics; 2.35A {Agrobacterium tumefaciens str} SCOP: d.129.3.8
Probab=99.13 E-value=1.4e-09 Score=82.67 Aligned_cols=121 Identities=12% Similarity=0.141 Sum_probs=76.9
Q ss_pred eeEEEEEEeCCCHHHHHHHHhccCCcccccccceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCccceEEEEEEEE
Q 030202 17 QGRACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLAI 96 (181)
Q Consensus 17 ~~~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~~ 96 (181)
..+.+++| ++|+++||++++|+.++|+|.|++.++ +...+ +-+.... .| - | .++ +.+
T Consensus 28 ~~~~si~I-~ap~eeVy~~~~D~e~lP~W~~~l~~~-~~~~~-----~~w~a~~--~p-~---G-------~v~---v~~ 84 (156)
T 2qpv_A 28 SRIIHLSV-EKPWAEVYDFAANPGNMPRWAAGLAGG-LEADG-----EDWIAKG--GP-L---G-------EVR---VNF 84 (156)
T ss_dssp EEEEEEEE-SSCHHHHHHHHHCGGGGGGTCGGGTTC-CEEET-----TEEEEEC--SS-S---C-------EEE---EEE
T ss_pred ceEEEEEE-cCCHHHHHHHHHChhhHHHHHHhhhhh-cccCC-----CcEEEec--cC-C---C-------cEE---EEE
Confidence 34789999 999999999999999999999999875 22211 1222220 12 1 2 222 333
Q ss_pred ecCC-C--eEEEEEeecccceeeEEEEEEEEEcCCceEEEEEEEEeeCCCCCHHHHHH---HHHHHHHHHHHHHH
Q 030202 97 NAEE-M--TLTYSIVDGNVGFYGYVSTLTVAPKENGCYIEWKYEVEPVKGWRLEDLDC---FISSGLQVMARRMK 165 (181)
Q Consensus 97 D~~~-~--~~~y~v~~g~~p~~~~~~t~~v~p~~~gT~v~W~~~~~p~~~~~~~~~~~---~~~~gl~~l~~~le 165 (181)
++.+ . ...|....+.. . ..+.++|.|.++||+|+|++. .+. +.....|+. .++..|++|++.||
T Consensus 85 ~~~~~~gv~d~~~~l~~g~--~-~~~~~rv~p~g~GTeV~~tl~-~~p-g~~~~~~~~~~~~v~~dL~~LK~l~E 154 (156)
T 2qpv_A 85 APHNEFGVIDHVVTLPDGL--K-VYNALRVTPNGSGTEVSFTLL-RLE-GMTDEDFEQDASAITADLEMLKSLLE 154 (156)
T ss_dssp CCCCSSCBCCEEEECTTSC--E-EEEEEEEEEETTEEEEEEEEE-CCT-TCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCceEEEEEEecCCCc--E-EEEEEEEEeCCCCEEEEEEEe-cCC-CCChhhhhhhHHHHHHHHHHHHHHHh
Confidence 3322 1 22444433211 1 234689999988999999984 443 345666643 67888888888777
No 37
>3q64_A MLL3774 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.50A {Mesorhizobium loti}
Probab=99.12 E-value=7.2e-09 Score=78.31 Aligned_cols=136 Identities=10% Similarity=0.020 Sum_probs=82.8
Q ss_pred EEEEEEeCCCHHHHHHHHhccCCcccccccce--eEEEecCCCCCCc-eEEEEeeeecCCCCCCCCCcCccceEEEEEEE
Q 030202 19 RACEELTGVKAEQIWAFLEDFFGLDKWFPTLT--TCIPIQGISGQPG-CVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLA 95 (181)
Q Consensus 19 ~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~--~~~~~~G~~~~vG-svR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~ 95 (181)
.++++| +||+++||+++.|...+.+|++... .+...+.+ -.+| ..+.... .| + | . ...+.-++++
T Consensus 12 ~~~r~i-~Ap~e~Vw~altdp~~~~~W~~~~~g~~~~~~~~d-~~~Gg~~~~~~~--~~-~---G--~--~~~~~g~v~e 79 (162)
T 3q64_A 12 IIERLY-PAPPSKVFFALGNADAKRRWFTDPDNPMPGRFEMD-FRVGGKEVNAGG--PK-D---G--P--IHVYTATYQD 79 (162)
T ss_dssp EEEEEE-SSCHHHHHHHHHCHHHHHHHSSCTTSCCGGGCEEC-CSTTCEEEEEEC--CT-T---S--C--CEEEEEEEEE
T ss_pred EEEEEe-CCCHHHHHHHHCCHHHHhhcCCCCCCccceEEEEC-CccCCEEEEEEE--CC-C---C--C--EEEEEEEEEE
Confidence 467788 9999999999999999999995321 11111111 1234 4444321 11 2 3 1 1257888999
Q ss_pred EecCCCeEEEEEee--cccceeeEEEEEEEEEcCCceEEEEEEEEeeCC-CCCHHHHHHHHHHHHHHHHHHHHHH
Q 030202 96 INAEEMTLTYSIVD--GNVGFYGYVSTLTVAPKENGCYIEWKYEVEPVK-GWRLEDLDCFISSGLQVMARRMKEA 167 (181)
Q Consensus 96 ~D~~~~~~~y~v~~--g~~p~~~~~~t~~v~p~~~gT~v~W~~~~~p~~-~~~~~~~~~~~~~gl~~l~~~le~~ 167 (181)
+++ ++++.|+... ...|......+++|+|.++||+|+++...-+.. ....+....-....|+.|++.|+..
T Consensus 80 ~~p-~~rl~~~~~~~~~~~~~~~s~v~~~l~~~~~gT~lt~~~~~~~~~~~~~~~~~~~GW~~~L~~L~~~le~~ 153 (162)
T 3q64_A 80 IVP-DQRIVYSYDMLFGETRISVSLATIQLFAEGEGTRLVLTEQGAFLDGHDTPSTREHGTGVLLDLLDAFLDKT 153 (162)
T ss_dssp EET-TTEEEEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEETTSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EcC-CCEEEEEEEecCCCCCCCceEEEEEEEEcCCCEEEEEEEEecCccchhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 998 6788777652 122344567899999999899999998764322 1233333333444455555555444
No 38
>2lcg_A Uncharacterized protein; start domain, structural genomics, northeast structural GENO consortium, NESG, unknown function, AHSA1; NMR {Ralstonia metallidurans}
Probab=99.12 E-value=2.6e-09 Score=78.74 Aligned_cols=129 Identities=9% Similarity=0.076 Sum_probs=82.1
Q ss_pred EEEEEEeCCCHHHHHHHHhccCCcccc-ccc-ceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCccceEEEEEEEE
Q 030202 19 RACEELTGVKAEQIWAFLEDFFGLDKW-FPT-LTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLAI 96 (181)
Q Consensus 19 ~v~~~I~~Ap~e~VW~~l~Df~~~~~w-~P~-v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~~ 96 (181)
.++++| +||+++||+++.|...+++| ++. -..+...+++ -.+|....+... .+ + | .....+.-+++++
T Consensus 4 ~~~~~i-~ap~e~Vw~altd~~~~~~W~~~~~~~~~~~~~~d-~~~Gg~~~~~~~-~~-~---g---~~~~~~~~~v~~~ 73 (142)
T 2lcg_A 4 TVETTV-AAPVGKVWRAYTTPEDIKQWNAASDDWHTTAATVD-LREGGAFSSRME-AK-D---G---SMGFDFAGTYTKV 73 (142)
T ss_dssp EEEEEE-SSCHHHHHHHTTCHHHHHHHCCSSTTEEEEEEEEC-CSTTCEEEEEEE-ET-T---S---SCEEEEEEEEEEE
T ss_pred EEEEEe-CCCHHHHHHHhCCHHHHhcCCCCCCCccceeeEEc-cccCCEEEEEEE-cC-C---C---CceeeeEEEEEEE
Confidence 467889 99999999999999999999 652 1222222222 234543333321 11 2 2 1011477889999
Q ss_pred ecCCCeEEEEEeecccceeeEEEEEEEEEcCCceEEEEEEEEeeCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 030202 97 NAEEMTLTYSIVDGNVGFYGYVSTLTVAPKENGCYIEWKYEVEPVKGWRLEDLDCFISSGLQVMARRMKEALQAY 171 (181)
Q Consensus 97 D~~~~~~~y~v~~g~~p~~~~~~t~~v~p~~~gT~v~W~~~~~p~~~~~~~~~~~~~~~gl~~l~~~le~~~~~~ 171 (181)
++ ++++.|+.. + ...+++|+|.++||+|+++.+..+ ....+. ...|.+.+..+|++++..+
T Consensus 74 ~p-~~~l~~~~~-g------~~~~~~l~~~~~gT~l~~~~~~~~--~~~~~~----~~~Gw~~~L~~L~~~le~~ 134 (142)
T 2lcg_A 74 VE-NKRIEYAFG-D------RTAKVEFLEAPQGVTVRVSFVAET--EYPVEQ----QQQGWQAILNNFKRHVESH 134 (142)
T ss_dssp ET-TTEEEEEET-T------EEEEEEEEEETTEEEEEEEEECCS--SSCHHH----HHHHHHHHHHHHHHHHHHS
T ss_pred cC-CCEEEEEcC-C------CEEEEEEEEcCCCEEEEEEEecCC--HHHHHH----HHHHHHHHHHHHHHHHHHH
Confidence 98 679999862 2 577899999988999999977632 223333 3555555556666666554
No 39
>1xuv_A Hypothetical protein MM0500; alpha-beta protein, northeast structural genomics consortium, NESG, structural genomics; 2.10A {Methanosarcina mazei GO1} SCOP: d.129.3.5
Probab=99.12 E-value=4.8e-09 Score=80.40 Aligned_cols=146 Identities=9% Similarity=0.011 Sum_probs=89.6
Q ss_pred eeeEEEEEEeCCCHHHHHHHHhccCCccccccc-ceeEEEecCCCCCCc-eEEEEeeeecCCCCCCCCCcCccceEEEEE
Q 030202 16 WQGRACEELTGVKAEQIWAFLEDFFGLDKWFPT-LTTCIPIQGISGQPG-CVRFCAGFKTPVDNKDDDHEQSVNWTKQKL 93 (181)
Q Consensus 16 w~~~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~-v~~~~~~~G~~~~vG-svR~~~~~~~~~~g~~G~~~~~~~~~~Erl 93 (181)
-.=.++++| +||+++||+++.|...+.+|++. -..+...+.+ -.+| ..+.... .| + | . ...+.-++
T Consensus 22 ~~i~~~r~i-~Ap~e~Vw~altdpe~~~~W~~~~~~~~~~~~~d-~~~Gg~~~~~~~--~~-~---G---~-~~~~~~~v 89 (178)
T 1xuv_A 22 QEIIITREF-DAPRELVFKAFTDPDLYTQWIGPRGFTTALKIFE-PKNGGSWQYIQK--DP-E---G---N-EYAFHGVN 89 (178)
T ss_dssp SEEEEEEEE-SSCHHHHHHHHHCHHHHTTTCSSTTCEEEEEEEC-CSTTCEEEEEEE--CT-T---S---C-EEEEEEEE
T ss_pred cEEEEEEEE-CCCHHHHHHHhCCHHHHHhCCCCCCccceEEEEe-cccCCEEEEEEE--CC-C---C---C-EEEEEEEE
Confidence 345678889 99999999999999999999752 1122222221 1244 3333321 12 2 3 1 12467889
Q ss_pred EEEecCCCeEEEEEeecccc--eeeEEEEEEEEEcC-CceEEEEEEEEeeCCCCCHHHHH-HHHHHHHHHHHHHHHHHHh
Q 030202 94 LAINAEEMTLTYSIVDGNVG--FYGYVSTLTVAPKE-NGCYIEWKYEVEPVKGWRLEDLD-CFISSGLQVMARRMKEALQ 169 (181)
Q Consensus 94 ~~~D~~~~~~~y~v~~g~~p--~~~~~~t~~v~p~~-~gT~v~W~~~~~p~~~~~~~~~~-~~~~~gl~~l~~~le~~~~ 169 (181)
+++++ +++|.|+......| -.....+++|+|.+ ++|+|+++..+.+.. ..+.+. ..+..|.+.+..+|++++.
T Consensus 90 ~e~~p-~~rl~~~~~~~~~~~~~~~~~v~~~l~~~~~ggT~lt~~~~~~~~~--~~~~~~~~~~~~Gw~~~L~~Lk~~le 166 (178)
T 1xuv_A 90 HDVTE-PERIISTFEFEGLPEKGHVILDTARFEALPGDRTKLTSHSVFQTIE--DRDGMLQSGMEEGINDSYERLDELLE 166 (178)
T ss_dssp EEEET-TTEEEEEEEETTSSSSCCCEEEEEEEEEETTTEEEEEEEEECSSHH--HHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred EEEeC-CCEEEEEEEecCCCCCCCcEEEEEEEEEcCCCCEEEEEEEEeCCHH--HHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 99998 67888887643222 12467899999998 589999998864310 111111 1134666666677777766
Q ss_pred hhhhhcc
Q 030202 170 AYEVIMH 176 (181)
Q Consensus 170 ~~~~~~~ 176 (181)
...+.-|
T Consensus 167 ~~~~~~~ 173 (178)
T 1xuv_A 167 KMKKLEH 173 (178)
T ss_dssp HHHHHHC
T ss_pred hcccchh
Confidence 6554433
No 40
>2lak_A AHSA1-like protein RHE_CH02687; NESG, structural genomics, northeast structural genomics CON PSI-biology, structure genomics, unknown function; NMR {Rhizobium etli}
Probab=99.10 E-value=5.4e-10 Score=84.06 Aligned_cols=128 Identities=15% Similarity=0.152 Sum_probs=83.2
Q ss_pred eeEEEEEEeCCCHHHHHHHHhccCCcccccccceeEEEecCCCCCCc-eEEEEeeeecCCCCCCCCCcCccceEEEEEEE
Q 030202 17 QGRACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQGISGQPG-CVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLA 95 (181)
Q Consensus 17 ~~~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~~~~~~~G~~~~vG-svR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~ 95 (181)
.=..+++| +||+++||+++.|...+++|++....... .+| ..+ +.. .| + . .+..++++
T Consensus 10 ~i~~~~~i-~Ap~e~Vw~altdp~~~~~W~~~~~~~~~------~~Gg~~~-~~~-----~g--~---~---~~~~~v~e 68 (160)
T 2lak_A 10 VVRREAHL-AAPPAAVFALMTDPEKILRWMGTEAEVEP------EPGGLYL-VNV-----TG--A---R---FARGSFRE 68 (160)
T ss_dssp EEEEEEEE-SSCHHHHHHHHHCHHHHHHTSCSSEEESC------STTCCEE-ECS-----ST--T---C---CSSCCEEE
T ss_pred eEEEEEEe-CCCHHHHHHHhcChHHHhhhCCCcceeec------cCCCEEE-EEE-----eC--C---c---eEEEEEEE
Confidence 45678889 99999999999999999999986433222 123 333 322 12 1 0 24456888
Q ss_pred EecCCCeEEEEEeecc---cceeeEEEEEEEEEcCCceEEEEEEEEeeCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 030202 96 INAEEMTLTYSIVDGN---VGFYGYVSTLTVAPKENGCYIEWKYEVEPVKGWRLEDLDCFISSGLQVMARRMKEALQAY 171 (181)
Q Consensus 96 ~D~~~~~~~y~v~~g~---~p~~~~~~t~~v~p~~~gT~v~W~~~~~p~~~~~~~~~~~~~~~gl~~l~~~le~~~~~~ 171 (181)
+++ ++++.|+...+. .+-.....+++|+|.++||+|+|+..--+. .+ ....+..|.+.+..+|++++.++
T Consensus 69 ~~p-~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~gT~l~~~~~~~~~----~~-~~~~~~~gw~~~L~~Lk~~le~~ 141 (160)
T 2lak_A 69 VVP-VHRLAYSFGWDGSEVVPPGSSLVEIDLIEQGGGTLLRLTHSGLPS----AE-QCAGHEEGWAHYLGRLTEVAAGR 141 (160)
T ss_dssp EET-TTEEEECCCCCSSSCCCTTSCEEEEEEEECSSSEEEEEEEECCCS----HH-HHHHHHHHHHHHHHHHHHHHHCS
T ss_pred EcC-CCEEEEEEEecCCCCCCCCcEEEEEEEEECCCCEEEEEEEeCCCC----HH-HHHHHHHHHHHHHHHHHHHHhcC
Confidence 987 678888765432 122346789999999889999998762221 11 22334556666666666666554
No 41
>1xn6_A Hypothetical protein BC4709; structural genomics, protein structure initiative, PSI, NESG target protein BCR68, alpha + beta; NMR {Bacillus cereus} SCOP: d.129.3.5
Probab=99.07 E-value=1.9e-09 Score=79.42 Aligned_cols=125 Identities=13% Similarity=0.132 Sum_probs=83.8
Q ss_pred eeEEEEEEeCCCHHHHHHHHhccCCcccccccceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCccceEEEEEEEE
Q 030202 17 QGRACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLAI 96 (181)
Q Consensus 17 ~~~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~~ 96 (181)
.=..+++| +||+++||+++.|...+++|+|.+ . + ...+|....+.. | . | .+.-+++++
T Consensus 9 ~i~~~~~i-~ap~e~Vw~~ltd~~~~~~W~~~~---~---~-~~~~G~~~~~~~---~-~---g-------~~~~~v~e~ 66 (143)
T 1xn6_A 9 DIKQTIVF-NASIQKVWSVVSTAEGIASWFMPN---D---F-VLEVGHEFHVQS---P-F---G-------PSPCKVLEI 66 (143)
T ss_dssp CEEEEEEE-SSCHHHHHHTTSCSHHHHTTSCCB---C---C-CCCTTCEECBCC---T-T---C-------CCCEEEEEE
T ss_pred EEEEEEEE-cCCHHHHHHHHhCHhHHHHhcCCC---C---c-CcCCCCEEEEEE---c-C---C-------CceEEEEEE
Confidence 34678889 999999999999999999999862 1 2 123455433332 2 2 3 246789999
Q ss_pred ecCCCeEEEEEeecccceeeEEEEEEEEEcCC-ceEEEEEEEEeeCC--C-----CCHHHHHHHHHHHHHHHH-HHHHHH
Q 030202 97 NAEEMTLTYSIVDGNVGFYGYVSTLTVAPKEN-GCYIEWKYEVEPVK--G-----WRLEDLDCFISSGLQVMA-RRMKEA 167 (181)
Q Consensus 97 D~~~~~~~y~v~~g~~p~~~~~~t~~v~p~~~-gT~v~W~~~~~p~~--~-----~~~~~~~~~~~~gl~~l~-~~le~~ 167 (181)
++ +++++|+...+ ....+++|+|.++ +|+|+++...-+.. + .........+..|.+.+. ..|+++
T Consensus 67 ~p-~~~l~~~~~~~-----~~~~~~~l~~~~~g~T~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gw~~~l~~~L~~~ 140 (143)
T 1xn6_A 67 DE-PNHLSFSWDTD-----GWVVSFDLKDLGDNKTEFTLIHGGWKHPDEILPKANAKSSIIRDRMSGGWVAIVNEKLKKV 140 (143)
T ss_dssp ET-TTEEEEEETTT-----TEEEEEEEEEEETTEEEEEEEEECCCSTTCBCTTTCSBHHHHHHHHHHHHHHHHTTHHHHH
T ss_pred eC-CCEEEEEEeCC-----CEEEEEEEEECCCCcEEEEEEEEccCccccccccccchhhHHHHHHHHhHHHHHHHHHHHH
Confidence 98 67899986543 3567899999988 79999987744321 1 112233344566666666 666665
Q ss_pred Hh
Q 030202 168 LQ 169 (181)
Q Consensus 168 ~~ 169 (181)
++
T Consensus 141 le 142 (143)
T 1xn6_A 141 VE 142 (143)
T ss_dssp HH
T ss_pred hc
Confidence 53
No 42
>3rd6_A MLL3558 protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 2.80A {Mesorhizobium loti}
Probab=99.06 E-value=1.1e-08 Score=77.26 Aligned_cols=135 Identities=9% Similarity=0.027 Sum_probs=80.2
Q ss_pred EEEEEEeCCCHHHHHHHHhccCCcccccccc--eeEEEecCCCCCCc-eEEEEeeeecCCCCCCCCCcCccceEEEEEEE
Q 030202 19 RACEELTGVKAEQIWAFLEDFFGLDKWFPTL--TTCIPIQGISGQPG-CVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLA 95 (181)
Q Consensus 19 ~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v--~~~~~~~G~~~~vG-svR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~ 95 (181)
.++++| +||+++||+++.|...+.+|++.. ..+...+.+ -.+| ..+.... .| + | . . ..+.-++++
T Consensus 11 ~~~r~i-~Ap~e~Vw~altdp~~~~~W~~~~~~~~~~~~~~d-~~~Gg~~~~~~~--~~-~---G--~-~-~~~~g~v~e 78 (161)
T 3rd6_A 11 TIERTY-PQSPDRVFHAFADKATVRRWRVDGDGFTVAEFSFD-FRVGGGEVSRFS--YG-G---G--P-E-VRLDAQFQD 78 (161)
T ss_dssp EEEEEE-SSCHHHHHHHHHCHHHHHHHTCCCCC---CEEEEC-CSTTCEEEEEEC--ST-T---S--C-C-EEEEEEEEE
T ss_pred EEEEEE-CCCHHHHHHHhcCHHHHhhccCCCCCceeeEEEEc-cCcCCEEEEEEE--CC-C---C--C-E-EEEEEEEEE
Confidence 457788 999999999999999999999532 111111221 2344 3443321 12 2 3 1 1 157788999
Q ss_pred EecCCCeEEEEEee--cccceeeEEEEEEEEEcCCceEEEEEEEEeeCC-CCCHHHHHHHHHHHHHHHHHHHHH
Q 030202 96 INAEEMTLTYSIVD--GNVGFYGYVSTLTVAPKENGCYIEWKYEVEPVK-GWRLEDLDCFISSGLQVMARRMKE 166 (181)
Q Consensus 96 ~D~~~~~~~y~v~~--g~~p~~~~~~t~~v~p~~~gT~v~W~~~~~p~~-~~~~~~~~~~~~~gl~~l~~~le~ 166 (181)
+++ ++++.|+... ...|......+++|+|.++||+|+++...-+.. ....+....-....|+.|++.|+.
T Consensus 79 ~~p-~~rl~~~~~~~~~~~~~~~s~v~~~l~~~~~gT~lt~~~~~~~~~~~~~~~~~~~GW~~~L~~L~~~le~ 151 (161)
T 3rd6_A 79 IVP-DQRIVFSYRMAIGPQPMSASLTTVELTPSGDGTRLTYTEQGAFFDGVDSAKGREEGTRGLLEALAAELQK 151 (161)
T ss_dssp EET-TTEEEEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEETTCCCHHHHHHHHHHHHHHHHHHC--
T ss_pred EcC-CCEEEEEEEecCCCCCCCceEEEEEEEECCCCEEEEEEEEecCcchhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 998 5778777652 122344567899999998899999998764322 123333333344444444444443
No 43
>2il5_A Hypothetical protein; structural genomics, APC23650, PSI-2, structure initiative; 2.30A {Staphylococcus aureus subsp} SCOP: d.129.3.5
Probab=99.05 E-value=1.1e-08 Score=77.40 Aligned_cols=143 Identities=13% Similarity=0.093 Sum_probs=88.3
Q ss_pred eeEEEEEEeCCCHHHHHHHHhccCCccccccc-ceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCccceEEEEEEE
Q 030202 17 QGRACEELTGVKAEQIWAFLEDFFGLDKWFPT-LTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLA 95 (181)
Q Consensus 17 ~~~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~-v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~ 95 (181)
.=.++++| +||+++||+++.|...+.+|++. -..+...+++ -.+|..-.+... .| + | . .....-++++
T Consensus 15 ~i~~~~~i-~ap~e~Vw~altdp~~~~~W~~p~~~~~~~~~~d-~~~Gg~~~~~~~-~~-~---G---~-~~~~~~~v~e 83 (171)
T 2il5_A 15 EVEIEKLY-KFSPELVYEAWTKKDLLKQWFMTSARTNKEIEAD-VKEGGKYRIVDQ-QR-N---G---K-VNVIEGIYES 83 (171)
T ss_dssp EEEEEEEE-SSCHHHHHHHTTCHHHHTTTSSSCTTTEEEEEEC-CSTTCEEEEEEE-CG-G---G---C-EEEEEEEEEE
T ss_pred eEEEEEEe-CCCHHHHHHHHCCHHHHHhccCCCCccceEEEec-ccCCCEEEEEEE-CC-C---C---C-EEEEEEEEEE
Confidence 44668889 99999999999999999999852 1122222222 124433222221 11 2 3 1 1146788999
Q ss_pred EecCCCeEEEEEeecccceeeEEEEEEEEEcCC-ceEEEEEEEEeeCCC--CCH-------HHHHHHHHHHHHHHHHHHH
Q 030202 96 INAEEMTLTYSIVDGNVGFYGYVSTLTVAPKEN-GCYIEWKYEVEPVKG--WRL-------EDLDCFISSGLQVMARRMK 165 (181)
Q Consensus 96 ~D~~~~~~~y~v~~g~~p~~~~~~t~~v~p~~~-gT~v~W~~~~~p~~~--~~~-------~~~~~~~~~gl~~l~~~le 165 (181)
+++ ++++.|+......|-.....+++|+|.++ +|+|+++....+..+ ... .........|.+.+..+|+
T Consensus 84 ~~p-~~rl~~~~~~~~~~~~~~~~~~~l~~~~~g~T~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gw~~~L~~L~ 162 (171)
T 2il5_A 84 LVM-DEYVKMTIGMPGLSETQDVIEVEFFERETGGTQMLFYYRSLVEKERRFTNLEYKQKKKEYHDAMVHGFELMFDKMY 162 (171)
T ss_dssp EET-TTEEEEEESCC--CCCCEEEEEEEEECSSSSEEEEEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EcC-CCEEEEEEEecCCCCCcEEEEEEEEECCCCCEEEEEEEEeccCcccccccchhccchhHHHHHHHHHHHHHHHHHH
Confidence 997 67999987654333234678999999988 899999986444311 111 2233445666777777777
Q ss_pred HHHhhh
Q 030202 166 EALQAY 171 (181)
Q Consensus 166 ~~~~~~ 171 (181)
+++.++
T Consensus 163 ~~le~~ 168 (171)
T 2il5_A 163 HVIETS 168 (171)
T ss_dssp HHHHTT
T ss_pred HHHhhc
Confidence 776543
No 44
>3q6a_A Uncharacterized protein; structural genomics, PSI-biology; 1.80A {Staphylococcus saprophyticus subsp}
Probab=99.04 E-value=9.3e-09 Score=75.09 Aligned_cols=123 Identities=9% Similarity=-0.017 Sum_probs=81.5
Q ss_pred EEEEEEeCCCHHHHHHHHhccCCcccccccceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCccceEEEEEEEEec
Q 030202 19 RACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLAINA 98 (181)
Q Consensus 19 ~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~~D~ 98 (181)
..+++| +||+++||+++.|...+++|++. .+ +++ -.+|..-.+... . .+ ....-++++++|
T Consensus 4 ~~~~~i-~ap~e~Vw~altd~~~~~~W~~~--~~---~~~-~~~Gg~~~~~~~--~-~~---------~~~~~~v~~~~p 64 (135)
T 3q6a_A 4 ITKMQV-DVPRETVFEAFVDPEKIGGFWFS--SS---SER-WEQGKTITLRYE--E-YD---------AELNINIERVED 64 (135)
T ss_dssp EEEEEE-SSCHHHHHHHHHCTTTGGGTSSS--EE---SSC-CCTTCEEEEECG--G-GT---------C-CEEEEEEEET
T ss_pred EEEEEe-CCCHHHHHHHHcCHHHhcccCCC--CC---ccc-ccCCCEEEEEEc--C-cC---------ceEEEEEEEEcC
Confidence 468889 99999999999999999999863 22 222 234543333321 0 01 034557888988
Q ss_pred CCCeEEEEEeecccceeeEEEEEEEEEcCCceEEEEEEEEeeCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 030202 99 EEMTLTYSIVDGNVGFYGYVSTLTVAPKENGCYIEWKYEVEPVKGWRLEDLDCFISSGLQVMARRMKEALQAY 171 (181)
Q Consensus 99 ~~~~~~y~v~~g~~p~~~~~~t~~v~p~~~gT~v~W~~~~~p~~~~~~~~~~~~~~~gl~~l~~~le~~~~~~ 171 (181)
++++.|+... + ..+++|+|.++||+|+++...-+.. ..+. ......|.+.+...|+++++.+
T Consensus 65 -~~~l~~~~~~------g-~~~~~l~~~~~gT~l~~~~~~~~~~--~~~~-~~~~~~GW~~~l~~L~~~le~g 126 (135)
T 3q6a_A 65 -NQLIAFTWGA------H-PITIQFEESEAGTVVTTTEKDFDTQ--DVKQ-LLGQKEGWVYMLSCLKVYLEHG 126 (135)
T ss_dssp -TTEEEEEETT------E-EEEEEEEEETTEEEEEEEECCCCSS--CHHH-HHHHHHHHHHHHHHHHHHHHHS
T ss_pred -CCEEEEEEcC------C-eEEEEEEECCCCEEEEEEEcCCCcc--hHHH-HhhchhCHHHHHHHHHHHHhcC
Confidence 6789888653 1 7789999988889999886643322 2222 2346667777777777777654
No 45
>3q63_A MLL2253 protein; structural genomics, PSI-biology, protein structure initiati alpha-beta protein, unknown, structure genomics; 2.00A {Mesorhizobium loti}
Probab=99.03 E-value=1.2e-08 Score=76.26 Aligned_cols=133 Identities=14% Similarity=0.106 Sum_probs=85.8
Q ss_pred EEEEEEeCCCHHHHHHHHhccCCcccccccceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCccceEEEEEEEEec
Q 030202 19 RACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLAINA 98 (181)
Q Consensus 19 ~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~~D~ 98 (181)
.++++| +||+++||+++.|...+.+|++. +. . .-.+|..-.+.. + .| + .+.-++++++|
T Consensus 12 ~~~~~i-~Ap~e~Vw~altdp~~~~~W~~~---~~---~-~~~~Gg~~~~~~---~-~g--~-------~~~g~v~e~~p 70 (151)
T 3q63_A 12 VVERQI-SHPPEKLWRALTQPHLIEEWLMK---ND---F-KPAVGHRFNISA---D-WG--G-------VLDCEVLAVEP 70 (151)
T ss_dssp EEEEEE-SSCHHHHHHHHHCHHHHHHHSCE---EC---C-CSSTTCEEEEEC---T-TS--C-------EEEEEEEEEET
T ss_pred EEEEEe-CCCHHHHHHHHcCHHHHHhhcCc---CC---C-ccCCCCEEEEEC---C-CC--C-------EEEEEEEEEeC
Confidence 567889 99999999999999999999983 21 1 123453333322 1 22 2 57788999998
Q ss_pred CCCeEEEEEeecc---cceeeEEEEEEEEEcCCceEEEEEEEEeeCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhc
Q 030202 99 EEMTLTYSIVDGN---VGFYGYVSTLTVAPKENGCYIEWKYEVEPVKGWRLEDLDCFISSGLQVMARRMKEALQAYEVIM 175 (181)
Q Consensus 99 ~~~~~~y~v~~g~---~p~~~~~~t~~v~p~~~gT~v~W~~~~~p~~~~~~~~~~~~~~~gl~~l~~~le~~~~~~~~~~ 175 (181)
++++.|+..... .+-.....+++|+|.++||+|+++...-+.. ..+. ......|...+...|++++..+|---
T Consensus 71 -~~~l~~~~~~~~~~~~~~~~s~v~~~l~~~~~gT~l~l~~~g~~~~--~~~~-~~~~~~GW~~~L~~L~~~le~~~~~~ 146 (151)
T 3q63_A 71 -NKTLSYTWNLAHQDPAFDLRSVVTFTLTPTPTGTHLRMEQSGFRPD--QRRA-YGGAKMGWPQFFEKLEQLLDRTDLEH 146 (151)
T ss_dssp -TTEEEEECBBCCSSTTTCBCCEEEEEEEECSSSEEEEEEEECCCTT--CHHH-HHHHHHHHHHHHHHHHHHHC------
T ss_pred -CCEEEEEEecCCCCCCCCCCeEEEEEEEEcCCCEEEEEEEeCCCcc--hHHH-HHhhhhCHHHHHHHHHHHHhccCccc
Confidence 678888866431 1122346789999998899999987643321 2222 23457777888888888888887544
Q ss_pred c
Q 030202 176 H 176 (181)
Q Consensus 176 ~ 176 (181)
|
T Consensus 147 ~ 147 (151)
T 3q63_A 147 H 147 (151)
T ss_dssp -
T ss_pred c
Confidence 3
No 46
>2lgh_A Uncharacterized protein; AHSA1, start domain, COG3832, PF08327, HSP90, heat shock, ST genomics, PSI-biology; NMR {Aeromonas hydrophila subsp}
Probab=99.02 E-value=1.2e-08 Score=75.57 Aligned_cols=128 Identities=13% Similarity=0.132 Sum_probs=79.6
Q ss_pred EEEEEEeCCCHHHHHHHHhccCCcccc-ccc-ceeEEEecCCCCCCc-eEEEEeeeecCCCCCCCCCcCccceEEEEEEE
Q 030202 19 RACEELTGVKAEQIWAFLEDFFGLDKW-FPT-LTTCIPIQGISGQPG-CVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLA 95 (181)
Q Consensus 19 ~v~~~I~~Ap~e~VW~~l~Df~~~~~w-~P~-v~~~~~~~G~~~~vG-svR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~ 95 (181)
.++++| +||+++||+++.|...+.+| ++. -..+...+.+ -.+| ..+..-. .| + | .....+.-++++
T Consensus 4 ~~~~~i-~Ap~e~Vw~altdp~~~~~W~~~p~~~~~~~~~~d-~~~Gg~~~~~~~--~~-~---G---~~~~~~~g~v~e 72 (144)
T 2lgh_A 4 SIEAHI-EQEIEAVWWAWNDPDCIARWNAASSDWHTTGSRVD-LVVGGRFCHHMA--AK-D---G---SAGFDFTGTFTR 72 (144)
T ss_dssp EEEEEE-SSCHHHHHHHHHCHHHHTTSSSCSTTEEEEEEEEC-CSTTCEEEEEEE--ET-T---S---SCEEEEEEEEEE
T ss_pred EEEEEe-CCCHHHHHHHhCCHHHHhccCCCCCCcccceEEEC-CCCCCEEEEEEE--CC-C---C---CceEEeEEEEEE
Confidence 467889 99999999999999999999 752 1122222221 1233 4444321 12 2 3 101146778999
Q ss_pred EecCCCeEEEEEeecccceeeEEEEEEEEEcCCceEEEEEEEEeeCCCCCHHHHHHHHHHHHHHHHHHHHHHHhh
Q 030202 96 INAEEMTLTYSIVDGNVGFYGYVSTLTVAPKENGCYIEWKYEVEPVKGWRLEDLDCFISSGLQVMARRMKEALQA 170 (181)
Q Consensus 96 ~D~~~~~~~y~v~~g~~p~~~~~~t~~v~p~~~gT~v~W~~~~~p~~~~~~~~~~~~~~~gl~~l~~~le~~~~~ 170 (181)
++| ++++.|+.. + ....+++|+|.++||+|+.+..+.+ ....+. ...|.+.+..+|++++..
T Consensus 73 ~~p-~~~l~~~~~-~-----~~~~~~~l~~~~~gT~l~~~~~~~~--~~~~~~----~~~Gw~~~L~~L~~~le~ 134 (144)
T 2lgh_A 73 VEA-PTRLSFVMD-D-----GREVDVQFASEPGGTWVQETFDAET--SHTPAQ----QQAGWQGILDNFKRYVEA 134 (144)
T ss_dssp EET-TTEEEEEET-T-----CCEEEEEEEEETTEEEEEEEEECCT--TSCHHH----HHHHHHHHHHHHHHHHHH
T ss_pred EeC-CCEEEEEec-C-----CcEEEEEEEEcCCCEEEEEEEECCC--HHHHHH----HHHHHHHHHHHHHHHHhh
Confidence 998 679999853 2 2567899999988999998877632 122322 345555555566555543
No 47
>1xn5_A BH1534 unknown conserved protein; structural genomics, protein structure initiative, PSI, BACI halodurans protein BH1534, alpha + beta; NMR {Bacillus halodurans} SCOP: d.129.3.5
Probab=99.02 E-value=6.4e-09 Score=77.13 Aligned_cols=124 Identities=13% Similarity=0.168 Sum_probs=83.8
Q ss_pred eEEEEEEeCCCHHHHHHHHhccCCcccccccceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCccceEEEEEEEEe
Q 030202 18 GRACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLAIN 97 (181)
Q Consensus 18 ~~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~~D 97 (181)
=..+++| +||+++||+++.|...+++|++.. +++ ..+|..-.+.. | . | .+.-++++++
T Consensus 7 i~~~~~i-~Ap~e~Vw~altd~~~~~~W~~~~------~~~-~~~Gg~~~~~~---~-~---g-------~~~~~v~e~~ 64 (146)
T 1xn5_A 7 IKKEVRF-NAPIEKVWEAVSTSEGLAFWFMEN------DLK-AETGHHFHLQS---P-F---G-------PSPCQVTDVE 64 (146)
T ss_dssp EEEEEEE-SSCHHHHHHHTTSHHHHHTTSCCB------CCC-SCTTCEEEEEC---S-S---C-------EEEEEEEEEE
T ss_pred EEEEEEE-cCCHHHHHHHHhChhHHHHhcCCC------CCC-ccCCCEEEEEe---c-C---C-------ceEEEEEEEe
Confidence 4678899 999999999999999999999852 111 23454433332 2 1 3 4688899999
Q ss_pred cCCCeEEEEEeecccceeeEEEEEEEEEcCCceEEEEEEEEeeCCC-------CCHHHHHHHHHHHHHHHH-HHHHHHHh
Q 030202 98 AEEMTLTYSIVDGNVGFYGYVSTLTVAPKENGCYIEWKYEVEPVKG-------WRLEDLDCFISSGLQVMA-RRMKEALQ 169 (181)
Q Consensus 98 ~~~~~~~y~v~~g~~p~~~~~~t~~v~p~~~gT~v~W~~~~~p~~~-------~~~~~~~~~~~~gl~~l~-~~le~~~~ 169 (181)
+ ++++.|+... .....+++|+|.++||+|+++...-+... .........+..|...+. .+|++++.
T Consensus 65 p-~~~l~~~~~~-----~~~~~~~~l~~~~~gT~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~GW~~~l~~~L~~~l~ 138 (146)
T 1xn5_A 65 R-PIKLSFTWDT-----DGWSVTFHLKEEENGTIFTIVHSGWKQGDTKVEKAGAESAVVHERMDRGWHDLVNERLRQIVE 138 (146)
T ss_dssp T-TTEEEEEETT-----TTEEEEEEEEECSSSEEEEEEEECCCSTTCBCSSSSSBHHHHHHHHHHHHHHHTTTTTHHHHC
T ss_pred C-CcEEEEEEeC-----CCEEEEEEEEEcCCCEEEEEEEEEecCCCcccccccchhHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 8 6789888653 12467899999988999999876433211 112233444666666666 67776664
No 48
>2l8o_A Uncharacterized protein; mixed alpha-beta protein, PSI-biology, structural genomics, structure initiative; NMR {Cytophaga hutchinsonii}
Probab=99.01 E-value=1.2e-08 Score=75.65 Aligned_cols=128 Identities=13% Similarity=0.076 Sum_probs=81.3
Q ss_pred EEEEEEeCCCHHHHHHHHhccCCcccc-ccc-ceeEEEecCCCCCCc-eEEEEeeeecCCCCCCCCCcCccceEEEEEEE
Q 030202 19 RACEELTGVKAEQIWAFLEDFFGLDKW-FPT-LTTCIPIQGISGQPG-CVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLA 95 (181)
Q Consensus 19 ~v~~~I~~Ap~e~VW~~l~Df~~~~~w-~P~-v~~~~~~~G~~~~vG-svR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~ 95 (181)
.++++| +||+++||+++.|...+.+| ++. -..+...+.+ -.+| ..+..-. .| + | .....+.-++++
T Consensus 5 ~~~~~i-~Ap~e~Vw~altdpe~~~~W~~~p~~~~~~~~~~d-~~~Gg~~~~~~~--~~-~---G---~~~~~~~g~v~e 73 (144)
T 2l8o_A 5 TVEVTV-YAAIEKVWKYWNEPAHIMKWCQASPEWHVPAAQND-LKAGGTFTTTMA--AK-D---G---SMSFDFGGVYDQ 73 (144)
T ss_dssp EEEEEE-CSCHHHHHHHHHCHHHHHHHSTTCTTCEEEEEECC-CSTTCEEEEEEE--CT-T---S---SCEEEEEEEEEE
T ss_pred EEEEEE-CCCHHHHHHHHCCHHHHhhccCCCCCcccceeEEc-cCCCCEEEEEEE--CC-C---C---CceeeeeEEEEE
Confidence 467889 99999999999999999999 752 2223222222 1234 4444321 12 2 3 100146778999
Q ss_pred EecCCCeEEEEEeecccceeeEEEEEEEEEcCCceEEEEEEEEeeCCCCCHHHHHHHHHHHHHHHHHHHHHHHhh
Q 030202 96 INAEEMTLTYSIVDGNVGFYGYVSTLTVAPKENGCYIEWKYEVEPVKGWRLEDLDCFISSGLQVMARRMKEALQA 170 (181)
Q Consensus 96 ~D~~~~~~~y~v~~g~~p~~~~~~t~~v~p~~~gT~v~W~~~~~p~~~~~~~~~~~~~~~gl~~l~~~le~~~~~ 170 (181)
+++ +++|.|+.. + ....+++|+|.++||+|+.+..+ +. ....+. ...|...+..+|++++..
T Consensus 74 ~~p-~~~l~~~~~-g-----~~~v~~~l~~~~~gT~l~~~~~~-~~-~~~~~~----~~~Gw~~~L~~L~~~le~ 135 (144)
T 2l8o_A 74 VKT-NDLIEYTIG-D-----GRKVRIVFTHTGDTTNIVESFDP-EE-TNPREL----QQSGWQAILNSFKSYTEN 135 (144)
T ss_dssp EET-TTEEEEEET-T-----CCEEEEEEEECSSSEEEEEEECC-CS-SSCHHH----HHHHHHHHHHHHHHHHGG
T ss_pred EeC-CCEEEEEeC-C-----CeEEEEEEEEcCCCEEEEEEEeC-CC-HHHHHH----HHHHHHHHHHHHHHHHHh
Confidence 998 679999853 2 25778999998889999998766 22 122322 455555666666666544
No 49
>3put_A Hypothetical conserved protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.83A {Rhizobium etli cfn 42} PDB: 3otl_A*
Probab=99.00 E-value=3.3e-08 Score=75.11 Aligned_cols=138 Identities=12% Similarity=0.095 Sum_probs=84.3
Q ss_pred EEEEEEeCCCHHHHHHHHhccCCcccccc-c----ceeEEEecCCCCCCc-eEEEEeeeecCCCCCCCCCcCccceEEEE
Q 030202 19 RACEELTGVKAEQIWAFLEDFFGLDKWFP-T----LTTCIPIQGISGQPG-CVRFCAGFKTPVDNKDDDHEQSVNWTKQK 92 (181)
Q Consensus 19 ~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P-~----v~~~~~~~G~~~~vG-svR~~~~~~~~~~g~~G~~~~~~~~~~Er 92 (181)
.++++| +||+++||+++.|-..+.+|++ . +..+.. + -.+| ..+.... .| + | . . ..+.-+
T Consensus 12 ~~~r~i-~Ap~e~Vw~a~Tdpe~l~~W~~~~~~~~~~~~~~-d---~~~GG~~~~~~~--~~-~---G--~-~-~~~~g~ 76 (166)
T 3put_A 12 VIERRL-TAPVARVFRAWSTPESKRQWFACHGEWVPLEYAL-D---FRPGGTERNYTA--DT-D---G--L-L-HAYDAR 76 (166)
T ss_dssp EEEEEE-SSCHHHHHHHHHCHHHHHHHHTCC---CCSEEEE-C---CSTTCEEEEEEE--CT-T---S--C-E-EEEEEE
T ss_pred EEEEEE-CCCHHHHHHHhCCHHHHHhcCCCCCCceeeEEEe-C---cccCCEEEEEEE--CC-C---C--C-E-EEEEEE
Confidence 457788 9999999999999999999984 2 112222 2 1233 4444321 12 2 3 1 1 147788
Q ss_pred EEEEecCCCeEEEEEee--cccceeeEEEEEEEEEcCCceEEEEEEEEeeCC-CCCHHHHHHHHHHHHHHHHHHHHHHHh
Q 030202 93 LLAINAEEMTLTYSIVD--GNVGFYGYVSTLTVAPKENGCYIEWKYEVEPVK-GWRLEDLDCFISSGLQVMARRMKEALQ 169 (181)
Q Consensus 93 l~~~D~~~~~~~y~v~~--g~~p~~~~~~t~~v~p~~~gT~v~W~~~~~p~~-~~~~~~~~~~~~~gl~~l~~~le~~~~ 169 (181)
++++++ ++++.|+... ...|......+++|++.++||+|+.+...-+.. ....+. ...|...+...|++++.
T Consensus 77 v~ev~p-~~rlv~t~~~~~~~~~~~~s~vt~~l~~~~~gT~ltl~~~~~~~~~~~~~~~----~~~GW~~~L~~L~~~le 151 (166)
T 3put_A 77 YIDIVP-DTRIIYAYEMKLGQTRISASLVTVAFDVEPSGTRMVFTEQVVFLDGYGDNGA----RLQGTEIGLDNLELFLV 151 (166)
T ss_dssp EEEEET-TTEEEEEEEEEETTEEEEEEEEEEEEEECSSSEEEEEEEEEEEETTCCCTTH----HHHHHHHHHHHHHHHHH
T ss_pred EEEEcC-CcEEEEEEEecCCCCCCCceEEEEEEEECCCCEEEEEEEEecCccchhhHHH----HHHHHHHHHHHHHHHHh
Confidence 999998 5777776542 123444567889999998899999987765322 112222 44555555566666666
Q ss_pred hhhhhcc
Q 030202 170 AYEVIMH 176 (181)
Q Consensus 170 ~~~~~~~ 176 (181)
.+..-+|
T Consensus 152 ~~~~~~~ 158 (166)
T 3put_A 152 RETSPIH 158 (166)
T ss_dssp HHC----
T ss_pred cCCCcce
Confidence 5544444
No 50
>2ldk_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Arthrobacter aurescens}
Probab=98.98 E-value=3.5e-08 Score=74.84 Aligned_cols=141 Identities=14% Similarity=0.164 Sum_probs=88.0
Q ss_pred eeEEEEEEeCCCHHHHHHHHhccCCccccccc-ceeEEEecCCCCCCc-eEEEEeeeecCCCCCCCCCcCccceEEEEEE
Q 030202 17 QGRACEELTGVKAEQIWAFLEDFFGLDKWFPT-LTTCIPIQGISGQPG-CVRFCAGFKTPVDNKDDDHEQSVNWTKQKLL 94 (181)
Q Consensus 17 ~~~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~-v~~~~~~~G~~~~vG-svR~~~~~~~~~~g~~G~~~~~~~~~~Erl~ 94 (181)
.=.++++| +||+++||+++.|...+.+|++. -..+...+++ -.+| ..+.... .| + | . .....-+++
T Consensus 13 ~i~~~~~i-~Ap~e~Vw~altdp~~~~~W~~p~~~~~~~~~~d-~~~Gg~~~~~~~--~~-~---g--~--~~~~~~~v~ 80 (172)
T 2ldk_A 13 SFSIVAEF-DADVKRVWAIWEDPRQLERWWGPPTWPATFETHE-FTVGGKAAYYMT--GP-D---G--T--KARGWWQFT 80 (172)
T ss_dssp EEEEEEEE-SSCHHHHHHHHHCHHHHHTTSSCTTSCEEEEEEC-CSTTCEEEEEEE--CT-T---S--C--EEEEEEEEE
T ss_pred eEEEEEEe-CCCHHHHHHHhCCHHHHHhccCCCCcccceEEEe-ecCCCEEEEEEE--CC-C---C--C--EEeeEEEEE
Confidence 34678889 99999999999999999889752 1112222221 2344 3343321 12 2 3 1 114678899
Q ss_pred EEecCCCeEEEEEeecc---cc---eeeEEEEEEEEEcCCceEEEEEEEEeeCCCCCHHHH-HHHHHHHHHHHHHHHHHH
Q 030202 95 AINAEEMTLTYSIVDGN---VG---FYGYVSTLTVAPKENGCYIEWKYEVEPVKGWRLEDL-DCFISSGLQVMARRMKEA 167 (181)
Q Consensus 95 ~~D~~~~~~~y~v~~g~---~p---~~~~~~t~~v~p~~~gT~v~W~~~~~p~~~~~~~~~-~~~~~~gl~~l~~~le~~ 167 (181)
++++ ++++.|+....+ .| +.....+++|+|.++||+|+++..+.+.. ..+.+ ...+..|.+.+..+|+++
T Consensus 81 e~~p-~~rl~~~~~~~~~~g~p~~~~~~~~v~~~l~~~~~gT~lt~~~~~~~~~--~~~~~~~~~~~~Gw~~~L~~L~~~ 157 (172)
T 2ldk_A 81 TIEA-PDHLEFDDGFADEHGAPVDELGVTHATVKLEPLENRTRMTIISTFESEE--QMQKMAEMGMEEGMREAIEQIDAV 157 (172)
T ss_dssp EECS-SSEEEEEEEEBCSSCCBCTTTCEEEEEEEEEEETTEEEEEEEEEESCHH--HHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEcC-CCEEEEEEeecCCCCCccCCCccEEEEEEEEEcCCCEEEEEEEEcCCHH--HHHHHHHhhHHHHHHHHHHHHHHH
Confidence 9988 678888765321 12 12467889999998899999998874321 11111 112467777777788887
Q ss_pred Hhhhh
Q 030202 168 LQAYE 172 (181)
Q Consensus 168 ~~~~~ 172 (181)
+.++.
T Consensus 158 le~~~ 162 (172)
T 2ldk_A 158 LSEPA 162 (172)
T ss_dssp HTCCS
T ss_pred HHHhH
Confidence 76553
No 51
>1xfs_A NC_840354, conserved hypothetical protein; structural genomics, protein structure initiative, NESG, ALP protein, PSI; 1.70A {Nitrosomonas europaea} SCOP: d.129.3.5
Probab=98.98 E-value=2.4e-08 Score=76.24 Aligned_cols=138 Identities=14% Similarity=0.094 Sum_probs=84.1
Q ss_pred eeEEEEEEeCCCHHHHHHHHhccCCccccccc-ceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCccceEEEEEEE
Q 030202 17 QGRACEELTGVKAEQIWAFLEDFFGLDKWFPT-LTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLA 95 (181)
Q Consensus 17 ~~~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~-v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~ 95 (181)
.=.++++| +||+++||+++.|...+.+|++. -..+...+++ -.+|..-.+.+. .| + | . ...+.-++++
T Consensus 11 ~i~~~r~i-~Ap~e~Vw~altdp~~~~~W~~p~~~~~~~~~~d-~~~Gg~~~~~~~-~~-~---G---~-~~~~~~~v~e 79 (178)
T 1xfs_A 11 DLMLKREL-AVPVNLVWRGLTEPELLKKWFVPKPWSISDCRVD-LRPGGEFYTVMQ-DP-E---G---N-KFPNSGCFLE 79 (178)
T ss_dssp EEEEEEEE-SSCHHHHHHHHHCHHHHTTTSSCTTCEEEEEEEC-CSTTCEEEEEEE-CT-T---C---C-EEEEEEEEEE
T ss_pred eEEEEEEe-cCCHHHHHHHhCCHHHHhhCCCCCCeeeeEEEEe-eECCcEEEEEEE-CC-C---C---C-EEEEEEEEEE
Confidence 34667889 99999999999999999999753 1122222222 234533333221 12 2 3 1 1156778999
Q ss_pred EecCCCeEEEEEeecc--ccee------------eEEEEEEEEEcCCceEEEEEEEEeeCCCCCHHHHHHH----HHHHH
Q 030202 96 INAEEMTLTYSIVDGN--VGFY------------GYVSTLTVAPKENGCYIEWKYEVEPVKGWRLEDLDCF----ISSGL 157 (181)
Q Consensus 96 ~D~~~~~~~y~v~~g~--~p~~------------~~~~t~~v~p~~~gT~v~W~~~~~p~~~~~~~~~~~~----~~~gl 157 (181)
+++ +++|.|+..... .|.. ....+++|+|.++||+|+++..+.+ .+..... +..|.
T Consensus 80 ~~p-~~rl~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~l~~~~~gT~l~~~~~~~~-----~~~~~~~~~~~~~~Gw 153 (178)
T 1xfs_A 80 VTD-EKRLIWTSALVKNYRPAVPATTSDKECAHIVMTAVIELQPTSSGTRYTACAMHNT-----PGQRKLHEEMGFHEGW 153 (178)
T ss_dssp EET-TTEEEEESSEEGGGEECCC-----------CCEEEEEEEECSSSEEEEEEEECSS-----HHHHHHHHTTTHHHHH
T ss_pred EeC-CCEEEEEEEEcCCCCccccccccccccccccEEEEEEEEECCCCEEEEEEEEcCC-----HHHHHHHHhhhHHHHH
Confidence 998 678888765221 1211 3578899999988999999988642 1112111 24566
Q ss_pred HHHHHHHHHHHhhh
Q 030202 158 QVMARRMKEALQAY 171 (181)
Q Consensus 158 ~~l~~~le~~~~~~ 171 (181)
+.+..+|++++.+.
T Consensus 154 ~~~l~~L~~~le~~ 167 (178)
T 1xfs_A 154 GTTITQLEELLKQE 167 (178)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh
Confidence 66666666666544
No 52
>2nn5_A Hypothetical protein EF_2215; structural genomics, APC29336, PSI-2, structure initiative; HET: MSE; 1.45A {Enterococcus faecalis} SCOP: d.129.3.5
Probab=98.97 E-value=2.5e-08 Score=77.39 Aligned_cols=123 Identities=13% Similarity=0.161 Sum_probs=81.9
Q ss_pred eeEEEEEEeCCCHHHHHHHHhccCCcccccccceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCccceEEEEEEEE
Q 030202 17 QGRACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLAI 96 (181)
Q Consensus 17 ~~~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~~ 96 (181)
.=.++++| +||+++||+++.|...+++|+|.........| |..+.... + ....-+++++
T Consensus 37 ~i~~~~~i-~Ap~e~VW~altdp~~l~~W~~~~~~~d~~~G-----g~~~~~~~------~---------~~~~~~v~e~ 95 (184)
T 2nn5_A 37 YFGTERAI-SASPQTIWRYLTETDKLKQWFPELEIGELGVN-----GFWRFILP------D---------FEETMPFTDY 95 (184)
T ss_dssp EEEEEEEE-SSCHHHHHHHHHCHHHHHHHCTTEEEEECSTT-----CEEEEEET------T---------EEEEEEEEEE
T ss_pred EEEEEEEe-CCCHHHHHHHHcCHHHHHHhCCCccccccCCC-----CEEEEEEe------C---------CCceEEEEEe
Confidence 44568889 99999999999999999999985433222112 34443321 1 1355688999
Q ss_pred ecCCCeEEEEEeecccceeeEEEEEEEEE-cCCceEEEEEEEEee-CCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 030202 97 NAEEMTLTYSIVDGNVGFYGYVSTLTVAP-KENGCYIEWKYEVEP-VKGWRLEDLDCFISSGLQVMARRMKEALQAYEV 173 (181)
Q Consensus 97 D~~~~~~~y~v~~g~~p~~~~~~t~~v~p-~~~gT~v~W~~~~~p-~~~~~~~~~~~~~~~gl~~l~~~le~~~~~~~~ 173 (181)
++ ++++.|+.. + ...+++|+| .++||+|+++..|.. ... ..+ ....|.+.+..+|++++..+..
T Consensus 96 ~p-~~rl~~~~~-~------~~v~~~l~~~~~~gT~l~~~~~~~~g~~~-~~~----~~~~GW~~~L~~Lk~~le~g~~ 161 (184)
T 2nn5_A 96 AE-EKYLGVTWD-T------GIIYFDLKEQAPHQTLLVFSESLPENFTT-PRH----KDIAGWSIVLNRLKQVVETPDA 161 (184)
T ss_dssp ET-TTEEEEEET-T------EEEEEEEEEEETTEEEEEEEEEECTTCSS-CHH----HHHHHHHHHHHHHHHHHHCTTC
T ss_pred cC-CCEEEEEEc-C------eEEEEEEEECCCCCEEEEEEEeccCCccc-hhh----HHHHHHHHHHHHHHHHHhcCCC
Confidence 88 578888753 1 467899999 788899999954432 111 122 2456666777777777766543
No 53
>2lf2_A Uncharacterized protein; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics consortium; NMR {Cytophaga hutchinsonii}
Probab=98.93 E-value=2e-08 Score=76.79 Aligned_cols=142 Identities=12% Similarity=0.100 Sum_probs=89.2
Q ss_pred eeEEEEEEeCCCHHHHHHHHhccCCcccccc-cceeEEEecCCCCCCc-eEEEEeeeecCCCCCCCCCcCccceEEEEEE
Q 030202 17 QGRACEELTGVKAEQIWAFLEDFFGLDKWFP-TLTTCIPIQGISGQPG-CVRFCAGFKTPVDNKDDDHEQSVNWTKQKLL 94 (181)
Q Consensus 17 ~~~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P-~v~~~~~~~G~~~~vG-svR~~~~~~~~~~g~~G~~~~~~~~~~Erl~ 94 (181)
.=.++++| +||+++||+++.|...+.+|++ .-..+...+++ -.+| ..|.... .| + | . ...+.-+++
T Consensus 17 ~i~~~~~i-~Ap~e~Vw~a~tdpe~~~~W~~p~~~~~~~~~~d-~~~Gg~~~~~~~--~~-~---G--~--~~~~~g~v~ 84 (175)
T 2lf2_A 17 TITIKREF-AAVRAIVWEAFTRAEILDQWWAPKPWKAKTKSMD-FKEGGTWLYAMV--GP-N---G--E--EHWSICEYA 84 (175)
T ss_dssp EEEEEEEE-SSCHHHHHHHHTCHHHHHHSSSSSSSEEEEEEEC-CSTTCEEEEEEE--CS-S---S--C--EEEEEEEEC
T ss_pred eEEEEEEE-cCCHHHHHHHhCCHHHHhhCcCCCCccceEEEEe-ccCCCEEEEEEE--CC-C---C--C--EEEeEEEEE
Confidence 45678889 9999999999999999999974 21122222222 1244 4444321 12 2 3 1 114678899
Q ss_pred EEecCCCeEEEEEeecc---cc---eeeEEEEEEEEEcCCceEEEEEEEEeeCCCCCHHHHHH----HHHHHHHHHHHHH
Q 030202 95 AINAEEMTLTYSIVDGN---VG---FYGYVSTLTVAPKENGCYIEWKYEVEPVKGWRLEDLDC----FISSGLQVMARRM 164 (181)
Q Consensus 95 ~~D~~~~~~~y~v~~g~---~p---~~~~~~t~~v~p~~~gT~v~W~~~~~p~~~~~~~~~~~----~~~~gl~~l~~~l 164 (181)
++++ +++|.|+....+ .| +.....+++|+|.++||+|+.+..+.+ .+.... .+..|...+..+|
T Consensus 85 e~~p-~~rl~~t~~~~~~~g~p~~~~~~~~v~~~l~~~~~gT~l~~~~~~~~-----~~~~~~~~~~~~~~Gw~~~L~~L 158 (175)
T 2lf2_A 85 IIKP-IERFTGKDGFTDASGKLNTEMPRSNWDMRFIDKGEITEVQYHISYDD-----VAQLEATIQMGFKEGITMAMENL 158 (175)
T ss_dssp CCCS-SSEEEEEEEEESSTTCCCTTSCCEEEEEEEEEETTEEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEcC-CCEEEEEEEecCCCCCcCCCCCcEEEEEEEEECCCCEEEEEEEecCC-----HHHHHHHHHHhHHHHHHHHHHHH
Confidence 9988 678877764321 12 224678999999988999999877532 222211 2466777777788
Q ss_pred HHHHhhhhhhcc
Q 030202 165 KEALQAYEVIMH 176 (181)
Q Consensus 165 e~~~~~~~~~~~ 176 (181)
++++......-|
T Consensus 159 ~~~le~~~~~~~ 170 (175)
T 2lf2_A 159 DELLVSGKKLEH 170 (175)
T ss_dssp HHHHHHHHSCCC
T ss_pred HHHHHhCchhhh
Confidence 887776655443
No 54
>3eli_A AHSA1, AHA1 domain protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi} SCOP: d.129.3.5
Probab=98.92 E-value=4.1e-08 Score=73.10 Aligned_cols=133 Identities=11% Similarity=-0.006 Sum_probs=80.3
Q ss_pred EEEEEEeCCCHHHHHHHHhccCCccccccc-ceeEE--EecCCCCCCc-eEEEEeeeecCCCCCCCCCcCccceEEEEEE
Q 030202 19 RACEELTGVKAEQIWAFLEDFFGLDKWFPT-LTTCI--PIQGISGQPG-CVRFCAGFKTPVDNKDDDHEQSVNWTKQKLL 94 (181)
Q Consensus 19 ~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~-v~~~~--~~~G~~~~vG-svR~~~~~~~~~~g~~G~~~~~~~~~~Erl~ 94 (181)
.++++| +||+++||+++.|...+.+|++. -..+. ..+. +-.+| ..+.... .| + | . ...+.-+++
T Consensus 5 ~~~r~i-~Ap~e~Vw~altdp~~~~~W~~~~~~~~~~~~~~~-d~~~Gg~~~~~~~--~~-~---G--~--~~~~~g~v~ 72 (152)
T 3eli_A 5 RLEREF-AVAPEALFAWVSDGAKLLQWWGPEGLHVPADQHDL-DFTRLGPWFSVMV--NG-E---G--Q--RYKVSGQVT 72 (152)
T ss_dssp EEEEEE-SSCHHHHHHHTTCHHHHHHHCSSTTCBCCTTSBCC-CCSSSEEEEEEEE--CT-T---C--C--EEEEEEEEE
T ss_pred EEEEEE-CCCHHHHHHHHcCHHHHhhccCCCCcccccceeEE-cccCCcEEEEEEE--CC-C---C--C--EEEEEEEEE
Confidence 467889 99999999999999999999862 11111 1112 12344 4443321 12 2 3 1 115778899
Q ss_pred EEecCCCeEEEEEeeccc---ceeeEEEEEEEEEcCCceEEEEEEEEeeCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Q 030202 95 AINAEEMTLTYSIVDGNV---GFYGYVSTLTVAPKENGCYIEWKYEVEPVKGWRLEDLDCFISSGLQVMARRMKEALQ 169 (181)
Q Consensus 95 ~~D~~~~~~~y~v~~g~~---p~~~~~~t~~v~p~~~gT~v~W~~~~~p~~~~~~~~~~~~~~~gl~~l~~~le~~~~ 169 (181)
++++ ++++.|+...... +......+++|+|.++||+|+.+-.--+ ..+. ......|-..+...|+++++
T Consensus 73 e~~p-~~~l~~~~~~~~~~~~~~~~~~v~~~l~~~~~gT~l~l~~~~~~----~~~~-~~~~~~GW~~~L~~L~~~l~ 144 (152)
T 3eli_A 73 HVKP-PQSVGFTWGWHDDDDRRGAESHVMFIVEPCAKGARLILDHRELG----DDEM-SLRHEEGWTSSLRKLAAELA 144 (152)
T ss_dssp EEET-TTEEEEEEEEECTTSCEEEEEEEEEECCBC--CEEEEEEEESCS----CHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred EEcC-CCEEEEEEeecCCCCCCCCcEEEEEEEEECCCCEEEEEEEccCC----CHHH-HHHHHHHHHHHHHHHHHHHh
Confidence 9998 6788877653222 1234677889999888899998644211 1222 33456666666667766653
No 55
>2kew_A Uncharacterized protein YNDB; start domain, resonance assignments, lipid binding, structural genomics, unknown FU PSI-2; NMR {Bacillus subtilis subsp} PDB: 2kte_A
Probab=98.91 E-value=2.9e-09 Score=79.60 Aligned_cols=129 Identities=16% Similarity=0.149 Sum_probs=87.1
Q ss_pred eeEEEEEEeCCCHHHHHHHHhccCCcccccccceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCccceEEEEEEEE
Q 030202 17 QGRACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLAI 96 (181)
Q Consensus 17 ~~~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~~ 96 (181)
.=..+++| +||+++||+++.|...+++|++.+ +++ -.+|....+.. | . | .+.-+++++
T Consensus 11 ~i~~~~~i-~Ap~e~Vw~altd~~~~~~W~~~~------~~~-~~~Gg~~~~~~---~-~---g-------~~~~~v~e~ 68 (152)
T 2kew_A 11 DITKSITL-EAPIQKVWETVSTSEGIAKWFMPN------DFQ-LKEGQEFHLQS---P-F---G-------PSPCKVLAV 68 (152)
T ss_dssp CEEEEEEE-CSCHHHHHHHSSSSHHHHHHHCSC------CCC-SCSSCCBCSSS---S-C---C-------SCCBEEEEE
T ss_pred EEEEEEEE-CCCHHHHHHHHhCHHHHHHhcCCC------CCC-CCCCCEEEEEe---c-C---C-------ceEEEEEEE
Confidence 45678889 999999999999999999998862 111 12444222221 2 1 2 245578899
Q ss_pred ecCCCeEEEEEeecccceeeEEEEEEEEEcCCceEEEEEEEEeeCC--CC-----CHHHHHHHHHHHHHHHH-HHHHHHH
Q 030202 97 NAEEMTLTYSIVDGNVGFYGYVSTLTVAPKENGCYIEWKYEVEPVK--GW-----RLEDLDCFISSGLQVMA-RRMKEAL 168 (181)
Q Consensus 97 D~~~~~~~y~v~~g~~p~~~~~~t~~v~p~~~gT~v~W~~~~~p~~--~~-----~~~~~~~~~~~gl~~l~-~~le~~~ 168 (181)
++ ++++.|+...+ ....+++|+|.++||+|+++..--+.. +. ...........|.+.+. ..|++++
T Consensus 69 ~p-~~~l~~~~~~~-----~~~~~~~l~~~~~gT~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GW~~~l~~~L~~~l 142 (152)
T 2kew_A 69 QA-PTELSFEWDTE-----GWVVTFQLEDLGEKTGFTLIHSGWKEPNQVIGKANEKSSVVRGKMDGGWTGIVNERLRKAV 142 (152)
T ss_dssp ET-TTEEEEECTTS-----CCEEEEEEECCSSCEEEEEEECCSSCCSBCSSSSSSBHHHHHHHHHHHHHHHTTTHHHHHH
T ss_pred eC-CcEEEEEEccC-----CEEEEEEEEECCCCEEEEEEEEeccCcccccccccchhHHHHHHHHHhHHHHHHHHHHHHH
Confidence 88 67899875543 346789999988899999876532211 11 12333455777888888 8888888
Q ss_pred hhhhh
Q 030202 169 QAYEV 173 (181)
Q Consensus 169 ~~~~~ 173 (181)
..++-
T Consensus 143 e~g~~ 147 (152)
T 2kew_A 143 EELEH 147 (152)
T ss_dssp TCSCS
T ss_pred hcccc
Confidence 77654
No 56
>3pu2_A Uncharacterized protein; SRPBCC superfamily, PSI-biology, NESG, RHR263, structural GE protein structure initiative; HET: MSE; 2.61A {Rhodobacter sphaeroides}
Probab=98.91 E-value=5.3e-08 Score=73.78 Aligned_cols=140 Identities=16% Similarity=0.146 Sum_probs=86.2
Q ss_pred eeEEEEEEeCCCHHHHHHHHhccCCccccccc-ceeEEEecCCCCCCc-eEEEEeeeecCCCCCCCCCcCccceEEEEEE
Q 030202 17 QGRACEELTGVKAEQIWAFLEDFFGLDKWFPT-LTTCIPIQGISGQPG-CVRFCAGFKTPVDNKDDDHEQSVNWTKQKLL 94 (181)
Q Consensus 17 ~~~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~-v~~~~~~~G~~~~vG-svR~~~~~~~~~~g~~G~~~~~~~~~~Erl~ 94 (181)
.=.++++| +||+++||+++.|...+.+|++. -..+...+++ -.+| ..+.... .| + | . . ..+.-+++
T Consensus 14 ~i~~~~~i-~Ap~e~Vw~altdp~~~~~W~~~~~~~~~~~~~d-~~~Gg~~~~~~~--~~-~---G--~-~-~~~~g~v~ 81 (164)
T 3pu2_A 14 RLEFRRHF-AATPEQLWAALTSPALLPAWLFARGWPMTECVFE-PHKGGLIRQVWT--GP-E---G--R-T-RGLTGRVI 81 (164)
T ss_dssp EEEEEEEE-SSCHHHHHHHHHCTTTGGGTSCBTTBCEEEEEEC-CSTTCEEEEEEE--CG-G---G--C-E-EEEEEEEE
T ss_pred eEEEEEEE-CCCHHHHHHHhcCHHHHhhEeCCCCeeeEEEEEe-ccCCCEEEEEEE--CC-C---C--C-E-EEEEEEEE
Confidence 34568889 99999999999999999999962 1112222222 2344 4444321 11 2 2 1 1 15678899
Q ss_pred EEecCCCeEEEEEeecc--cceeeEEEEEEEEEcCCceEEEEEEEEeeCCCCCHHHH-HHHHHHHHHHHHHHHHHHHhhh
Q 030202 95 AINAEEMTLTYSIVDGN--VGFYGYVSTLTVAPKENGCYIEWKYEVEPVKGWRLEDL-DCFISSGLQVMARRMKEALQAY 171 (181)
Q Consensus 95 ~~D~~~~~~~y~v~~g~--~p~~~~~~t~~v~p~~~gT~v~W~~~~~p~~~~~~~~~-~~~~~~gl~~l~~~le~~~~~~ 171 (181)
+++| ++++.|+..-.. .| .....+++|+|.++||+|+++..|... ...+.. ...+..|...+..+|++++.+-
T Consensus 82 e~~p-~~rl~~t~~~~~~~~~-~~s~vt~~l~~~~~gT~l~l~~~~~~~--~~~~~~~~~~~~~GW~~~L~~L~~~l~~~ 157 (164)
T 3pu2_A 82 LAEP-PHRLIHSELYDEDWTG-GETLVTLQLLPVEGGTELAMAVDYATP--EARDAVAASAMATEMEEAYRHLDVMLAAL 157 (164)
T ss_dssp EEET-TTEEEEEEBCC---CC-SCEEEEEEEEEETTEEEEEEEEECSST--THHHHHHTSTHHHHHHHHHHHHHHHHHHC
T ss_pred EEcC-CCEEEEEEeccCCCCC-CCEEEEEEEEEcCCCEEEEEEEEeCCH--HHHHHHHHhhHHHHHHHHHHHHHHHHHHh
Confidence 9998 678888764211 22 135778999999889999999885421 112211 1224566667777777776554
Q ss_pred h
Q 030202 172 E 172 (181)
Q Consensus 172 ~ 172 (181)
+
T Consensus 158 ~ 158 (164)
T 3pu2_A 158 E 158 (164)
T ss_dssp -
T ss_pred h
Confidence 3
No 57
>2l9p_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Staphylococcus epidermidis}
Probab=98.86 E-value=2.9e-08 Score=74.91 Aligned_cols=136 Identities=10% Similarity=0.093 Sum_probs=84.4
Q ss_pred EEEEEEeCCCHHHHHHHHhccCCccccccc-ceeEEEecCCCCCCc-eEEEEeeeecCCCCCCCCCcCccceEEEEEEEE
Q 030202 19 RACEELTGVKAEQIWAFLEDFFGLDKWFPT-LTTCIPIQGISGQPG-CVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLAI 96 (181)
Q Consensus 19 ~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~-v~~~~~~~G~~~~vG-svR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~~ 96 (181)
.++++| +||+++||+++.|...+.+|++. -..+...+++ -.+| ..+..-. .| + | .. .+.-+++++
T Consensus 11 ~~~~~i-~Ap~e~Vw~a~tdpe~~~~W~~p~~~~~~~~~~d-~~~Gg~~~~~~~--~~-~---G---~~--~~~g~v~e~ 77 (164)
T 2l9p_A 11 IFTRTF-SAPINKVFDAYTKRELFEQWFHPQDASVTVYDFN-ATKGGSAFYAIQ--AP-Q---M---IS--YTIAEYLQV 77 (164)
T ss_dssp EECCEE-SSCHHHHHHHHHCHHHHTTTCCCTTCEEEEEECC-CSTTEEEEEEEE--ET-T---E---EE--EEEEEESCC
T ss_pred EEEEEe-CCCHHHHHHHhCCHHHHHhccCCCCceeeEEEEe-ccCCCEEEEEEE--CC-C---C---CE--EEEEEEEEE
Confidence 567788 99999999999999999999752 1122222332 2345 3444321 12 2 3 11 267889999
Q ss_pred ecCCCeEEEEEeecc---cc---eeeEEEEEEEEEcCCceEEEEEEEEeeCCCCCHHHHHH-HHHHHHHHHHHHHHHHHh
Q 030202 97 NAEEMTLTYSIVDGN---VG---FYGYVSTLTVAPKENGCYIEWKYEVEPVKGWRLEDLDC-FISSGLQVMARRMKEALQ 169 (181)
Q Consensus 97 D~~~~~~~y~v~~g~---~p---~~~~~~t~~v~p~~~gT~v~W~~~~~p~~~~~~~~~~~-~~~~gl~~l~~~le~~~~ 169 (181)
++ +++|.|+....+ .| ......+++|++.++||+|+.+..+.+. ...+.+.. .+..|...+..+|++++.
T Consensus 78 ~p-~~rl~~t~~~~~~~g~p~~~~~~~~v~~~l~~~~~gT~l~~~~~~~~~--~~~~~~~~~~~~~Gw~~~L~~L~~~le 154 (164)
T 2l9p_A 78 DA-PYYIEYLDYFATSKGEKDTSMPGMHITLNFEEVKGKTTVTSTSTFPTE--SAAQQAIDMGVETGMNSTLNQLEKLLN 154 (164)
T ss_dssp BT-TTEEEEEEEEEBTTBSCCSSSCCEEEEEEECCCSSSEEEEEEEECSST--THHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred cC-CCEEEEEEEecCCCCCccCCCCceEEEEEEEECCCCEEEEEEEEcCCH--HHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 88 678887765321 11 2246778999998889999999876432 12222211 256666777777777765
Q ss_pred h
Q 030202 170 A 170 (181)
Q Consensus 170 ~ 170 (181)
+
T Consensus 155 ~ 155 (164)
T 2l9p_A 155 Q 155 (164)
T ss_dssp S
T ss_pred H
Confidence 4
No 58
>3uid_A Putative uncharacterized protein; SRPBCC superfamily, beta sandwich, function, structural genomics, TB structural genomics conso TBSGC; 1.57A {Mycobacterium smegmatis} SCOP: d.129.3.0
Probab=98.83 E-value=6.8e-08 Score=73.64 Aligned_cols=139 Identities=14% Similarity=0.108 Sum_probs=85.0
Q ss_pred eEEEEEEeCCCHHHHHHHHhccCCcccccc-cceeEEEecCCCCCC-ceEEEEeeeecCCCCCCCCCcCccceEEEEEEE
Q 030202 18 GRACEELTGVKAEQIWAFLEDFFGLDKWFP-TLTTCIPIQGISGQP-GCVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLA 95 (181)
Q Consensus 18 ~~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P-~v~~~~~~~G~~~~v-GsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~ 95 (181)
=.++++| +||+++||+++.|-..+.+|++ .-..+...+.+ -.+ |..+..-. .| + | . . ..+.-++++
T Consensus 15 i~~~r~i-~Ap~e~Vw~a~Tdpe~l~~W~~p~~~~~~~~~~d-~r~GG~~~~~~~--~~-~---G--~-~-~~~~g~~~e 82 (168)
T 3uid_A 15 LTITAEF-AAPVTRIWQIYADPRQLEKVWGPPSHPATVVDHD-LRPGGRVTYFMT--GP-D---G--E-K-YAGYWEITA 82 (168)
T ss_dssp EEEEEEE-SSCHHHHHHHHHSHHHHHHHHCCTTSCCEEEEEC-CSTTCEEEEEEE--CT-T---S--C-E-EEEEEEEEE
T ss_pred EEEEEEE-cCCHHHHHHHhCCHHHHhhEeCCCCeeeeEEEEc-ccCCcEEEEEEE--CC-C---C--C-E-EeeEEEEEE
Confidence 3568889 9999999999999999999974 21122222221 123 34554421 12 2 3 1 1 147788999
Q ss_pred EecCCCeEEEEEeec---ccc---eeeEEEEEEEEEcCCceEEEEEEEEeeCCCCCHHHHHH-HHHHHHHHHHHHHHHHH
Q 030202 96 INAEEMTLTYSIVDG---NVG---FYGYVSTLTVAPKENGCYIEWKYEVEPVKGWRLEDLDC-FISSGLQVMARRMKEAL 168 (181)
Q Consensus 96 ~D~~~~~~~y~v~~g---~~p---~~~~~~t~~v~p~~~gT~v~W~~~~~p~~~~~~~~~~~-~~~~gl~~l~~~le~~~ 168 (181)
+++ ++++.|+-... ..| ......+++|++.++||+|+.+..|... ...+.+.. .+..|...+..+|++++
T Consensus 83 v~p-~~rlv~t~~~~~~~g~p~~~~~~s~vt~~l~~~~~gT~lt~~~~~~~~--~~~~~~~~~g~~~GW~~~L~~L~~~l 159 (168)
T 3uid_A 83 VDE-PHSFSFLDGFADEDFNPNTDLPVSTNVYTFTEHDGGTRATYVGTYASA--EALQQVLDMGVIEGASSAINQIDALL 159 (168)
T ss_dssp EET-TTEEEEEEEEECTTSCBCSSCCCEEEEEEEEEETTEEEEEEEEECSCH--HHHHHHHHTTHHHHHHHHHHHHHHHT
T ss_pred EeC-CcEEEEEEeeccCCCCcCCCCCcEEEEEEEEECCCCEEEEEEEecCCH--HHHHHHHHhcHHHHHHHHHHHHHHHH
Confidence 998 56777765321 112 1245789999999889999998654321 11111111 25677777888888877
Q ss_pred hhh
Q 030202 169 QAY 171 (181)
Q Consensus 169 ~~~ 171 (181)
.+-
T Consensus 160 ~~~ 162 (168)
T 3uid_A 160 TAT 162 (168)
T ss_dssp CSC
T ss_pred Hhh
Confidence 553
No 59
>2k5g_A Uncharacterized protein; structural genomiccs, protein structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} SCOP: d.129.3.5
Probab=98.67 E-value=2.5e-07 Score=71.83 Aligned_cols=130 Identities=13% Similarity=0.048 Sum_probs=80.6
Q ss_pred eeEEEEEEeCCCHHHHHHHHhccCCcccccccceeEEEecCCCCCCceEEEEeeeecCC-------C-----CCCCCCcC
Q 030202 17 QGRACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQGISGQPGCVRFCAGFKTPV-------D-----NKDDDHEQ 84 (181)
Q Consensus 17 ~~~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~~~~~~~G~~~~vGsvR~~~~~~~~~-------~-----g~~G~~~~ 84 (181)
.=.++++| +||+++||+++.|...+.+|++.. . . .-.+|..-.+.+. .+. . | +
T Consensus 20 ~i~~~~~i-~Ap~e~Vw~altdpe~~~~W~~~~---~---~-d~~~Gg~~~~~~~-~~~~~~~~~p~~~~~~g--~---- 84 (191)
T 2k5g_A 20 SIRFERLL-PGPIERVWAWLADADKRARWLAGG---E---L-PRQPGQTFELHFN-HAALTAETAPARYAQYD--R---- 84 (191)
T ss_dssp SEEEEEEE-SSSSHHHHHHHHCHHHHTTTSCCC---C---C-CSSTTCEEEEEEC-GGGSCCSSCCSSCSGGG--S----
T ss_pred eEEEEEEe-CCCHHHHHHHHcCHHHHhhcCCCC---C---C-CccCCCEEEEEEc-CCccccccCcccccccC--C----
Confidence 34678889 999999999999999999999863 1 1 1234433333321 110 0 0 0
Q ss_pred ccceEEEEEEEEecCCCeEEEEEeecccceeeEEEEEEEEEcCCceEEEEEEE-EeeCCCCCHHHHHHHHHHHHHHHHHH
Q 030202 85 SVNWTKQKLLAINAEEMTLTYSIVDGNVGFYGYVSTLTVAPKENGCYIEWKYE-VEPVKGWRLEDLDCFISSGLQVMARR 163 (181)
Q Consensus 85 ~~~~~~Erl~~~D~~~~~~~y~v~~g~~p~~~~~~t~~v~p~~~gT~v~W~~~-~~p~~~~~~~~~~~~~~~gl~~l~~~ 163 (181)
...+.-+++++++ ++++.|+......+ .....+++|++.++||+|+.+.. +.. .+ ....+..|.+.+..+
T Consensus 85 -~~~~~g~v~e~~p-p~rl~~~~~~~~~~-~~~~v~~~l~~~~~gT~l~~~~~~~~~-----~~-~~~~~~~GW~~~L~~ 155 (191)
T 2k5g_A 85 -PIVARHTLLRCEP-PRVLALTWGGGAGE-APSEVLFELSEAGEQVRLVLTHTRLAD-----RA-AMLDVAGGWHAHLAV 155 (191)
T ss_dssp -CEEEEEEEEEEET-TTEEEEECCCCSSS-SCCEEEEEEEECSSSEEEEEEEECCCS-----HH-HHHHHTTTTTTHHHH
T ss_pred -CceeEEEEEEecC-CCEEEEEeecCCCC-CCEEEEEEEEEcCCCEEEEEEEecCCC-----HH-HHHHHHHhHHHHHHH
Confidence 0146788999998 67898876544322 23467899999988999998876 431 11 122344444445555
Q ss_pred HHHHHhh
Q 030202 164 MKEALQA 170 (181)
Q Consensus 164 le~~~~~ 170 (181)
|++++..
T Consensus 156 L~~~le~ 162 (191)
T 2k5g_A 156 LAGKLAG 162 (191)
T ss_dssp HHHHHHT
T ss_pred HHHHHCC
Confidence 5555543
No 60
>1x53_A Activator of 90 kDa heat shock protein ATPase homolog 1; AHA1, HSP90,DUF704, C-terminal domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.129.3.5
Probab=98.67 E-value=2.2e-08 Score=74.03 Aligned_cols=125 Identities=11% Similarity=-0.042 Sum_probs=79.6
Q ss_pred eEEEEEEeCCCHHHHHHHHhccCCcccccccceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCccceEEEEEEEEe
Q 030202 18 GRACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLAIN 97 (181)
Q Consensus 18 ~~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~~D 97 (181)
=.++++| +||+++||+++.|-..+.+|++.....+. .+|.. +.+. + | .+.=++++++
T Consensus 13 i~~~~~i-~ap~e~Vw~altdp~~~~~W~~~~~~~d~------~~Gg~--~~~~----~---G-------~~~g~v~e~~ 69 (145)
T 1x53_A 13 ITLKETF-LTSPEELYRVFTTQELVQAFTHAPATLEA------DRGGK--FHMV----D---G-------NVSGEFTDLV 69 (145)
T ss_dssp EEEEEEE-SSCHHHHHHHTTCHHHHHHHSCSCCBCCC------STTCC--CBBT----T---T-------TEECCEEEEE
T ss_pred EEEEEEE-CCCHHHHHHHhCCHHHHHHhcCCCceEEC------CCCCE--EEEE----C---C-------eeEEEEEEEe
Confidence 3567888 99999999999999999999864322221 12321 1210 1 2 1444678888
Q ss_pred cCCCeEEEEEeecccce-eeEEEEEEEEEcCCceEEEEEEEEeeCCCCCHHHHHHHHHHHHHH-HHHHHHHHHhhhh
Q 030202 98 AEEMTLTYSIVDGNVGF-YGYVSTLTVAPKENGCYIEWKYEVEPVKGWRLEDLDCFISSGLQV-MARRMKEALQAYE 172 (181)
Q Consensus 98 ~~~~~~~y~v~~g~~p~-~~~~~t~~v~p~~~gT~v~W~~~~~p~~~~~~~~~~~~~~~gl~~-l~~~le~~~~~~~ 172 (181)
+ ++++.|+-.....|. .....+++|.+.+++|+|+.+...-|.. . ......|.+. +...|++++..+-
T Consensus 70 p-~~~l~~~~~~~~~~~~~~~~v~~~l~~~~~gT~l~~~~~~~~~~-----~-~~~~~~Gw~~~~l~~L~~~le~g~ 139 (145)
T 1x53_A 70 P-EKHIVMKWRFKSWPEGHFATITLTFIDKNGETELCMEGRGIPAP-----E-EERTRQGWQRYYFEGIKQTFGYGA 139 (145)
T ss_dssp T-TTEEEEEEEETTSCTTCCEEEEEECCBCSSCEEEEEEEEEEEHH-----H-HHHHHHTTHHHHHHHHHHHTCCCC
T ss_pred C-CCEEEEEEecCCCCCCCcEEEEEEEEECCCCEEEEEEEECCCHH-----H-HHHHHhchhHHHHHHHHHHHhcCc
Confidence 7 678887655433221 1246788898887889999985544421 1 2446667776 6777777776553
No 61
>3qsz_A STAR-related lipid transfer protein; structural genomics, PSI-biology; 2.39A {Xanthomonas axonopodis PV}
Probab=98.60 E-value=4.9e-06 Score=63.84 Aligned_cols=141 Identities=13% Similarity=0.160 Sum_probs=83.9
Q ss_pred eEEEEEEeCCCHHHHHHHHhccCCcccccccceeEEEecCCCCCCceEEEEeee-ecCCCCCCCCCcCccceEEEEEEEE
Q 030202 18 GRACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQGISGQPGCVRFCAGF-KTPVDNKDDDHEQSVNWTKQKLLAI 96 (181)
Q Consensus 18 ~~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~~~~~~~G~~~~vGsvR~~~~~-~~~~~g~~G~~~~~~~~~~Erl~~~ 96 (181)
=+++.+| ++|++++++++.|.+..++|.|.+..+.+++. .+.. .+-..... ..|..+ ...+.-+-...
T Consensus 29 ~k~~~~v-~~s~~~v~~~l~D~~~~~~W~~~~~~~~vle~-~~~~-~i~y~~~~~p~p~~~--------RD~v~~~~~~~ 97 (189)
T 3qsz_A 29 FRGEVRL-KAAADDVVKVLRDANAFRQWMPDVAASELLKA-TDTE-QYHYLDNSAPWPVSN--------RDGVYHFTYEK 97 (189)
T ss_dssp EEEEEEE-SSCHHHHHHHHHCGGGGGGTSTTEEEEEEEEE-CSSE-EEEEEEECCSSSCCC--------EEEEEEEEEEE
T ss_pred EEEEEEE-ECCHHHHHHHHHhHHHhhhHHHhcCEEEEEee-cCCc-eEEEEEeecCCCcCC--------cceEEEEEEEE
Confidence 3456778 99999999999999999999999999988764 2221 22222221 011111 11333333333
Q ss_pred ecCC-CeEEEEEeeccc-------ceeeEEEEEEEEEcCC-ceEEEEEEEEeeCCCCCHHHH-HHHHHHHHHHHHHHHHH
Q 030202 97 NAEE-MTLTYSIVDGNV-------GFYGYVSTLTVAPKEN-GCYIEWKYEVEPVKGWRLEDL-DCFISSGLQVMARRMKE 166 (181)
Q Consensus 97 D~~~-~~~~y~v~~g~~-------p~~~~~~t~~v~p~~~-gT~v~W~~~~~p~~~~~~~~~-~~~~~~gl~~l~~~le~ 166 (181)
++++ ..+.++...... ....+.+.+.++| ++ +|+|+|...++|. |..+.-+ ..++..++-.+.+.|++
T Consensus 98 ~~~g~~~i~~~~~~~~~P~~~~~VR~~~~~~~~~i~p-~~~~t~vt~~~~~dp~-G~iP~~lvn~~~~~~~~~~l~~L~k 175 (189)
T 3qsz_A 98 AGDGAITVRVEAVPDYLPLRKGKVRIPRAKGQWTLVP-DADGVDVTYQMHASPG-GSIPSWLANQTVVETPFGTLKALRS 175 (189)
T ss_dssp CTTSCEEEEEEECTTSSCCCTTSEECCCEEEEEEEEE-CSSSEEEEEEEEECSC-SSSCHHHHHHTTTHHHHHHHHHHHH
T ss_pred CCCCeEEEEEEcCCCccCCCCCeEEeeEeeEEEEEEE-CCCeEEEEEEEEeCCC-CCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4332 223343321111 1457788999999 76 5999999999997 4444444 33345555555566666
Q ss_pred HHhhh
Q 030202 167 ALQAY 171 (181)
Q Consensus 167 ~~~~~ 171 (181)
+++.+
T Consensus 176 ~~~~~ 180 (189)
T 3qsz_A 176 HLRQA 180 (189)
T ss_dssp HHTC-
T ss_pred Hhhhc
Confidence 65554
No 62
>3ni8_A PFC0360W protein; heat shock, malaria, ATPase, structural genomics consortium, unknown function; 2.50A {Plasmodium falciparum}
Probab=98.58 E-value=6.8e-07 Score=67.58 Aligned_cols=129 Identities=11% Similarity=0.009 Sum_probs=78.1
Q ss_pred eEEEEEEeCCCHHHHHHHHhccCCcccccccceeEEEecCCCCCCc-eEEEEeeeecCCCCCCCCCcCccceEEEEEEEE
Q 030202 18 GRACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQGISGQPG-CVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLAI 96 (181)
Q Consensus 18 ~~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~~~~~~~G~~~~vG-svR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~~ 96 (181)
=.++++| +||+++||+++.|-..+.+|++. ..+.. +- .+| ..+.. . | .+.=+++++
T Consensus 21 i~~~r~~-~ap~e~Vw~A~Tdpe~l~~W~~g-~~~~~-d~---~~GG~~~~~-------~---G-------~~~g~v~ev 77 (158)
T 3ni8_A 21 FEITEEY-YVPPEVLFNAFTDAYTLTRLSRG-SLAEV-DL---KVGGKFSLF-------S---G-------SILGEFTEI 77 (158)
T ss_dssp EEEEEEE-SSCHHHHHHHHHCHHHHHHHTTT-SCCEE-CC---STTCEEEET-------T---T-------TEEEEEEEE
T ss_pred EEEEEEE-CCCHHHHHHHhcCHHHHHhhcCC-CccEE-Ec---cCCCEEEEe-------c---C-------CEEEEEEEE
Confidence 3567788 99999999999999999999973 12222 21 233 33322 1 2 345678889
Q ss_pred ecCCCeEEEEEeecccc-eeeEEEEEEEEEc-CCceEEEEEEEEeeCCC-CCHHHHHHHHHHHHHH-HHHHHHHHHhh
Q 030202 97 NAEEMTLTYSIVDGNVG-FYGYVSTLTVAPK-ENGCYIEWKYEVEPVKG-WRLEDLDCFISSGLQV-MARRMKEALQA 170 (181)
Q Consensus 97 D~~~~~~~y~v~~g~~p-~~~~~~t~~v~p~-~~gT~v~W~~~~~p~~~-~~~~~~~~~~~~gl~~-l~~~le~~~~~ 170 (181)
+| ++++.|+-...+.+ -.....+++|++. +++|+|+.+..--|... ...+........|-+. +...|++++..
T Consensus 78 ~p-~~rlv~tw~~~~~~~~~~s~vt~~l~~~~~~~T~ltl~~~g~~~~~~~~~~~~~~~~~~GW~~~~L~~Lk~~Le~ 154 (158)
T 3ni8_A 78 TK-PHKIVEKWKFRDWNECDYSTVTVEFISVKENHTKLKLTHNNIPASNKYNEGGVLERCKNGWTQNFLHNIEVILGY 154 (158)
T ss_dssp ET-TTEEEEEEEETTSCSSCCEEEEEEEEEEETTEEEEEEEEECCCSSCTTCCCCHHHHHHHHHHHTHHHHHHHTSCC
T ss_pred eC-CcEEEEEEEecCCCCCCcEEEEEEEEecCCCCEEEEEEEEccCchhhhccchhHHHHHhChhHHHHHHHHHHhCc
Confidence 88 56777654322211 1124678999995 67899998866444321 1111122335666666 57777776643
No 63
>4fpw_A CALU16; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 2.50A {Micromonospora echinospora} PDB: 2luz_A
Probab=98.57 E-value=3.5e-07 Score=70.88 Aligned_cols=116 Identities=15% Similarity=0.197 Sum_probs=75.7
Q ss_pred EEEEEEeCCCHHHHHHHHhccCCcccccccceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCccceEEEEEEEEec
Q 030202 19 RACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLAINA 98 (181)
Q Consensus 19 ~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~~D~ 98 (181)
.++++| +||+++||+++.|-..+.+|++.. +. +-.+|..-.+.+ + ..-+++++++
T Consensus 24 ~~~r~i-~Appe~Vw~alTdpe~l~~W~~p~------~~-d~~~Gg~~~~~~---~--------------~~g~v~e~~p 78 (181)
T 4fpw_A 24 IIRQRY-DAPVDEVWSACTDPNRINRWFIEP------KG-DLREGGNFALQG---N--------------ASGDILRCEP 78 (181)
T ss_dssp EEEEEE-SSCHHHHHHHHHCHHHHHHHSCCE------ES-CCSTTCEEEESS---S--------------CEEECCEEET
T ss_pred EEEEEE-CCCHHHHHHHHcChHHHhhccCCC------cc-CCCCCCEEEEEe---c--------------CCEEEEEEcC
Confidence 567888 999999999999999999998642 11 123443322221 0 1235788887
Q ss_pred CCCeEEEEEeecccceeeEEEEEEEEEcCCceEEEEEEEEeeCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 030202 99 EEMTLTYSIVDGNVGFYGYVSTLTVAPKENGCYIEWKYEVEPVKGWRLEDLDCFISSGLQVMARRMKEAL 168 (181)
Q Consensus 99 ~~~~~~y~v~~g~~p~~~~~~t~~v~p~~~gT~v~W~~~~~p~~~~~~~~~~~~~~~gl~~l~~~le~~~ 168 (181)
+++|.|+...++.+ ....+++|+|.++||+|+.+....+. +.. ..+..|...+...|++++
T Consensus 79 -p~rl~~tw~~~~~~--~s~vt~~l~~~~~gT~Ltl~~~~~~~-----e~~-~~~~~GW~~~L~~L~~~L 139 (181)
T 4fpw_A 79 -PRRLTISWVYEGKP--DSEVELRLSEEGDGTLLELEHATTSE-----QML-VEVGVGWEMALDFLGMFI 139 (181)
T ss_dssp -TTEEEEEEBCTTSC--CEEEEEEEEEETTEEEEEEEEEESCH-----HHH-HHHHHHHHHHHHHHHHHC
T ss_pred -CcEEEEEEEcCCCC--cEEEEEEEEECCCcEEEEEEEEcCCH-----HHH-HHHHHhHHHHHHHHHHHh
Confidence 67888887644333 34678999998888999998766431 222 334555555555555554
No 64
>2luz_A CALU16; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Micromonospora echinospora}
Probab=98.45 E-value=4.2e-06 Score=65.44 Aligned_cols=116 Identities=14% Similarity=0.165 Sum_probs=73.9
Q ss_pred EEEEEeCCCHHHHHHHHhccCCcccccccceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCccceEEEEEEEEecC
Q 030202 20 ACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLAINAE 99 (181)
Q Consensus 20 v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~~D~~ 99 (181)
++.++ +||+++||+++.|-..+.+|++.+ +. + -.+|..-.+.+ ...-+++++++
T Consensus 36 i~R~f-~Ap~e~VW~AlTdpe~l~~W~~~~---~~-d---~r~GG~~~~~~-----------------~~~g~v~ev~p- 89 (192)
T 2luz_A 36 IRQRY-DAPVDEVWSACTDPNRINRWFIEP---KG-D---LREGGNFALQG-----------------NASGDILRCEP- 89 (192)
T ss_dssp EEEEE-SSCHHHHHHHHHCHHHHTTTSCCE---EE-C---CSTTSEEEETT-----------------SEEEEEEEEET-
T ss_pred EEEEe-CCCHHHHHHHHcCHHHHheeeCCC---cc-c---CccCcEEEeec-----------------cccceEEEEec-
Confidence 56778 999999999999999999999642 21 1 12333222221 13346888988
Q ss_pred CCeEEEEEeecccceeeEEEEEEEEEcCCceEEEEEEEEeeCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Q 030202 100 EMTLTYSIVDGNVGFYGYVSTLTVAPKENGCYIEWKYEVEPVKGWRLEDLDCFISSGLQVMARRMKEALQ 169 (181)
Q Consensus 100 ~~~~~y~v~~g~~p~~~~~~t~~v~p~~~gT~v~W~~~~~p~~~~~~~~~~~~~~~gl~~l~~~le~~~~ 169 (181)
+++|.|+-.....+ ....+++|+|.++||+++.+-...+ .+.. ..+..|-+.+...|+++|.
T Consensus 90 p~rL~~tw~~~~~~--~~~vt~~L~~~g~gT~Ltl~h~~~~-----~~~~-~~~~~GW~~~Ld~L~~~L~ 151 (192)
T 2luz_A 90 PRRLTISWVYEGKP--DSEVELRLSEEGDGTLLELEHATTS-----EQML-VEVGVGWEMALDFLGMFIR 151 (192)
T ss_dssp TTEEEEEEEESSSC--EEEEEEEEEEETTEEEEEEEEEESC-----HHHH-HHHHHHHHHHHHHHHHHHT
T ss_pred CeeEEEEEeecCCC--CceEEEEEEEcCCcEEEEEEEECCC-----HHHH-HHHhccHHHHHHHHHHHhC
Confidence 67888875433222 2356899999999999988765433 2222 2244555555666666653
No 65
>1zxf_A CALC; SELF-sacrificing resistance protein, structural genomics, PSI, protein structure initiative; NMR {Micromonospora echinospora} SCOP: d.129.3.5 PDB: 2gkc_A* 2gkd_A 2l65_A*
Probab=98.42 E-value=2.6e-06 Score=63.82 Aligned_cols=129 Identities=11% Similarity=0.100 Sum_probs=71.8
Q ss_pred EEEEEEeCCCHHHHHHHHhccCCcccccc-cc------eeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCccceEEE
Q 030202 19 RACEELTGVKAEQIWAFLEDFFGLDKWFP-TL------TTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQ 91 (181)
Q Consensus 19 ~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P-~v------~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~E 91 (181)
.++++| +||+++||+++.| .+.+|++ .. ..+... ..| |.. .... | + | . . ...=
T Consensus 7 ~~~r~~-~Ap~e~Vw~A~Td--~l~~W~~p~~~~~~~~~~~~~d--r~G--G~~-~~~~---~-~---G--~-~--~~~g 66 (155)
T 1zxf_A 7 RHSVTV-KADRKTAFKTFLE--GFPEWWPNNFRTTKVGAPLGVD--KKG--GRW-YEID---E-Q---G--E-E--HTFG 66 (155)
T ss_dssp EEEEEE-SSHHHHHHHHHTT--CSSSSSSGGGSTTTTCSSCEEE--TTT--TEE-ECCC---T-T---T--S-C--CCCE
T ss_pred EEEEEE-eCCHHHHHHHHHh--hHHhhcCCCccccCCCceEEEE--CCC--CEE-EEEC---C-C---C--C-e--EeEE
Confidence 467888 9999999999998 4888884 31 123332 222 233 2221 2 2 3 1 1 1124
Q ss_pred EEEEEecCCCeEEEEEeecc----cceeeEEEEEEEEEcCCc-eEEEEEEEEeeCCCC-CHHHHHHHHHHHHHHHHHHHH
Q 030202 92 KLLAINAEEMTLTYSIVDGN----VGFYGYVSTLTVAPKENG-CYIEWKYEVEPVKGW-RLEDLDCFISSGLQVMARRMK 165 (181)
Q Consensus 92 rl~~~D~~~~~~~y~v~~g~----~p~~~~~~t~~v~p~~~g-T~v~W~~~~~p~~~~-~~~~~~~~~~~gl~~l~~~le 165 (181)
++++++| +++|+|+-.... .|-.....+++|++.++| |+++.+-..-+..+. ....+...+..|...+...|+
T Consensus 67 ~v~ev~p-p~rl~~tw~~~~~~~~~~~~~s~vt~~l~~~~~g~T~ltl~~~~~~~~~~~~~~~~~~~~~~GW~~~l~~L~ 145 (155)
T 1zxf_A 67 LIRKVDE-PDTLVIGWRLNGFGRIDPDNSSEFTVTFVADGQKKTRVDVEHTHFDRMGTKHAKRVRNGMDKGWPTILQSFQ 145 (155)
T ss_dssp EEEEEET-TTEEEEECCCSSSSSCCCSSCCCEEEEEEEETTTEEEEEEEECSSTTSCHHHHHHHHHHHTTTHHHHHHHHH
T ss_pred EEEEECC-CCEEEEEEecCCCCCCCCCCcEEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHhhHHHHHHHHH
Confidence 6888988 678888743221 121234668999999887 999877553221111 112223233345555555555
Q ss_pred HHH
Q 030202 166 EAL 168 (181)
Q Consensus 166 ~~~ 168 (181)
+++
T Consensus 146 ~~l 148 (155)
T 1zxf_A 146 DKI 148 (155)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 66
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=98.40 E-value=3.4e-06 Score=74.46 Aligned_cols=128 Identities=10% Similarity=0.051 Sum_probs=91.4
Q ss_pred EEEEEeCCCHHHHHHHHhccCCcccccccceeEEEecC-CCCCCceEEEEeeeecCCCCCCCCCcCccceEEEEE--EEE
Q 030202 20 ACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQG-ISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKL--LAI 96 (181)
Q Consensus 20 v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~~~~~~~G-~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl--~~~ 96 (181)
.+..| +||+++||+.+++.+++++|.|.....+++.+ ++-.+|++- +.+ | + | . ...-++ +++
T Consensus 5 ~~~~i-~~p~~~v~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~~-~~~---~--~--~--~----~w~~~~~~t~~ 69 (516)
T 3oh8_A 5 TSHFI-PFPREMVWDWHTRKGAVARLTPPFIPLNPITQAERLADGTTI-FSL---P--A--G--L----KWVARHDLSGF 69 (516)
T ss_dssp EEEEE-SSCHHHHHHHHHSTTHHHHHSCTTSSCEECSCCSCSSSCEEE-EEC---S--T--T--C----EEEEEECGGGC
T ss_pred EEEEc-cCCHHHHHHHhcCcchHHHhCCCCCceEEecCCCCCcCCeEE-Eec---C--C--C--c----EEEEEEccccc
Confidence 46778 99999999999999999999997777776642 233577655 553 3 2 2 1 445567 888
Q ss_pred ecCCCeEEEEEeecccc-eeeEEEEEEEEEcCCceEEEEEEEEeeCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 030202 97 NAEEMTLTYSIVDGNVG-FYGYVSTLTVAPKENGCYIEWKYEVEPVKGWRLEDLDCFISSGLQVMARRMKEA 167 (181)
Q Consensus 97 D~~~~~~~y~v~~g~~p-~~~~~~t~~v~p~~~gT~v~W~~~~~p~~~~~~~~~~~~~~~gl~~l~~~le~~ 167 (181)
++ .+.|..+...|+++ +..+..+..|.+.++||+++.+++|... ...+..++..--..+.+.++..
T Consensus 70 ~~-~~~F~d~~~~gp~~~~~~w~h~h~f~~~~~gt~~~d~~~~~~p----~~~L~~~f~~R~~~l~~~l~~~ 136 (516)
T 3oh8_A 70 LN-GSRFTDVCLTAPVKALANWRHVHNFVDQDGGTLITDSVSTRLP----ASTLTGMFAYRQTQLIEDLKFL 136 (516)
T ss_dssp BT-TTEEEEECCSCSSGGGSSCEEEEEEEEETTEEEEEEEEECSSC----GGGTHHHHHHHHHHHHHHHHHH
T ss_pred cC-CCeEEEEeccCcccceeeeEEEEEEEEcCCCcEEEEEEEeeCc----HHHHHHHHHHHHHHHHHHHHHh
Confidence 87 68999999988755 6778888899999889999999999844 2233333333334444444443
No 67
>1ln1_A PC-TP, phosphatidylcholine transfer protein; start domain, lipid binding protein; HET: DLP; 2.40A {Homo sapiens} SCOP: d.129.3.2 PDB: 1ln2_A* 1ln3_A*
Probab=98.03 E-value=0.00045 Score=53.56 Aligned_cols=140 Identities=15% Similarity=0.146 Sum_probs=85.4
Q ss_pred EEEEEEeC-CCHHHHHHHHhccCCcccccccceeEEEecCCCCCCceEEEEeee-ecCCCCCCCCCcCccceEEEE-EEE
Q 030202 19 RACEELTG-VKAEQIWAFLEDFFGLDKWFPTLTTCIPIQGISGQPGCVRFCAGF-KTPVDNKDDDHEQSVNWTKQK-LLA 95 (181)
Q Consensus 19 ~v~~~I~~-Ap~e~VW~~l~Df~~~~~w~P~v~~~~~~~G~~~~vGsvR~~~~~-~~~~~g~~G~~~~~~~~~~Er-l~~ 95 (181)
+++.+| + +|+++|++++.|....++|.|.+..+++++- ++ ..+-..... ..|... ...+..+ ...
T Consensus 55 k~~~~i-~~~~~~~v~~~l~d~~~r~~Wd~~~~~~~vle~-~~--~~i~~~~~~~p~p~~~--------RD~v~~~~~~~ 122 (214)
T 1ln1_A 55 KVFGVL-EDCSPTLLADIYMDSDYRKQWDQYVKELYEQEC-NG--ETVVYWEVKYPFPMSN--------RDYVYLRQRRD 122 (214)
T ss_dssp EEEEEE-TTSCHHHHHHHHHCHHHHHHHCTTEEEEEEEEE-TT--EEEEEEEECCCTTSCC--------EEEEEEEEEEE
T ss_pred EEEEEE-CCCCHHHHHHHHcCHHHHHHHHHHHhhEEEecc-CC--CEEEEEEEEcCCCCCC--------ceEEEEEEEEe
Confidence 566777 6 9999999999999888999999999887753 22 233333321 112110 0123222 223
Q ss_pred EecCCCeE---EEEEeecc-cc-------eeeEEEEEEEEEcCC-ceEEEEEEEEeeCCCCCHHHH-HHHHHHHHHHHHH
Q 030202 96 INAEEMTL---TYSIVDGN-VG-------FYGYVSTLTVAPKEN-GCYIEWKYEVEPVKGWRLEDL-DCFISSGLQVMAR 162 (181)
Q Consensus 96 ~D~~~~~~---~y~v~~g~-~p-------~~~~~~t~~v~p~~~-gT~v~W~~~~~p~~~~~~~~~-~~~~~~gl~~l~~ 162 (181)
+++.+..+ ...-++.+ .| ...+.+.+.++|.++ +|+|++...++|. |..+.-+ ..+...++..+.+
T Consensus 123 ~~~~g~~~~~i~~~Sv~~p~~P~~~~~VR~~~~~~~~~i~p~~~~~t~v~~~~~~Dp~-G~iP~~l~n~~~~~~~~~~l~ 201 (214)
T 1ln1_A 123 LDMEGRKIHVILARSTSMPQLGERSGVIRVKQYKQSLAIESDGKKGSKVFMYYFDNPG-GQIPSWLINWAAKNGVPNFLK 201 (214)
T ss_dssp ECSTTCCEEEEEEEECCBTTBCCCTTSEEECCEEEEEEEEECSSSSEEEEEEEEECCS-SCCCHHHHHHHHHTHHHHHHH
T ss_pred cccCCCeEEEEEEecccCCCCCCCCCcEEEEEEEEEEEEecCCCCceEEEEEEEECCC-CcccHHHHHHHHHHHhHHHHH
Confidence 44333222 12222211 12 446788899999875 5999999999998 4455444 3446666666777
Q ss_pred HHHHHHhhh
Q 030202 163 RMKEALQAY 171 (181)
Q Consensus 163 ~le~~~~~~ 171 (181)
.|++++..+
T Consensus 202 ~l~k~~~~y 210 (214)
T 1ln1_A 202 DMARACQNY 210 (214)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHhc
Confidence 777776543
No 68
>1jss_A Stard4, cholesterol-regulated start protein 4; start domain, structural genomics, PSI, protein structure initiative; 2.20A {Mus musculus} SCOP: d.129.3.2
Probab=97.47 E-value=0.0096 Score=46.68 Aligned_cols=143 Identities=8% Similarity=-0.003 Sum_probs=80.7
Q ss_pred EEEEEEeCCCHHHHHHHHhccCCcccccccceeEEEecCCCCCCceEEEEeeeecC--CCCCCCCCcCccceEEEEEEEE
Q 030202 19 RACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQGISGQPGCVRFCAGFKTP--VDNKDDDHEQSVNWTKQKLLAI 96 (181)
Q Consensus 19 ~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~~~~~~~G~~~~vGsvR~~~~~~~~--~~g~~G~~~~~~~~~~Erl~~~ 96 (181)
++..+| ++|+++|++++.|...-++|.+.+..+.+++--++.---++...-...+ ..+ ...+.-|-..-
T Consensus 70 k~~~~v-~~~~~~v~~~l~d~~~r~~Wd~~~~~~~vle~id~~~~I~y~~~~~~~~~~v~~--------RDfv~~r~~~~ 140 (224)
T 1jss_A 70 KAQGVM-DDVVNNVIDHIRPGPWRLDWDRLMTSLDVLEHFEENCCVMRYTTAGQLLNIISP--------REFVDFSYTVG 140 (224)
T ss_dssp EEEEEE-SSCHHHHHHHHSSSTTHHHHCSSEEEEEEEEECSTTEEEEEEEECCBTTTTBCC--------EEEEEEEEEEE
T ss_pred EEEEEE-eCCHHHHHHHHhCcccccccccceeeEEEEEEcCCCeEEEEEEcccccCCCCCC--------CeEEEEEEEEE
Confidence 567778 9999999999999777799999999988875222111112222211000 111 11333332223
Q ss_pred ecCCCeEEEEEeeccc------ceeeEEEEEEEEEcCC---ceEEEEEEEEeeCCCCCHHHHH-HHHHHHHHHHHHHHHH
Q 030202 97 NAEEMTLTYSIVDGNV------GFYGYVSTLTVAPKEN---GCYIEWKYEVEPVKGWRLEDLD-CFISSGLQVMARRMKE 166 (181)
Q Consensus 97 D~~~~~~~y~v~~g~~------p~~~~~~t~~v~p~~~---gT~v~W~~~~~p~~~~~~~~~~-~~~~~gl~~l~~~le~ 166 (181)
++....+...-++.+. ....+.+.+.+.|.++ +|+|+|.+..+|. |..+..+. .++..++-...+.|.+
T Consensus 141 ~~~~~vi~~~Sv~hp~~~~g~VR~~~~~~g~~i~p~~~~~~~t~vt~~~~~Dp~-G~iP~~lvn~~~~~~~~~~~~~Lr~ 219 (224)
T 1jss_A 141 YEEGLLSCGVSVEWSETRPEFVRGYNHPCGWFCVPLKDSPSQSLLTGYIQTDLR-GMIPQSAVDTAMASTLANFYSDLRK 219 (224)
T ss_dssp ETTEEEEEEEECCCCCCCTTSEECEECSEEEEEEEETTEEEEEEEEEEECEECC-SCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCeEEEEEeeeecCCCCCCCEEEEecccEEEEEEcCCCCCceEEEEEEEeCCC-CCccHHHHHHHHHHhHHHHHHHHHH
Confidence 3333222222222211 2234556788999753 5999999999997 44454443 3455566666667776
Q ss_pred HHhhh
Q 030202 167 ALQAY 171 (181)
Q Consensus 167 ~~~~~ 171 (181)
++.+|
T Consensus 220 ~~~~~ 224 (224)
T 1jss_A 220 GLRKA 224 (224)
T ss_dssp HTC--
T ss_pred HHhhC
Confidence 65443
No 69
>3p0l_A Steroidogenic acute regulatory protein, mitochond; structural genomics consortium, SGC, start domain, cholester transport, cholesterol; 3.40A {Homo sapiens}
Probab=97.33 E-value=0.013 Score=45.75 Aligned_cols=141 Identities=13% Similarity=0.155 Sum_probs=78.4
Q ss_pred EEEEEEeCCCHHHHHHHH-hccCCcccccccceeEEEecCCCCCCceEEEEeee--ecCCCCCCCCCcCccceEEEEEEE
Q 030202 19 RACEELTGVKAEQIWAFL-EDFFGLDKWFPTLTTCIPIQGISGQPGCVRFCAGF--KTPVDNKDDDHEQSVNWTKQKLLA 95 (181)
Q Consensus 19 ~v~~~I~~Ap~e~VW~~l-~Df~~~~~w~P~v~~~~~~~G~~~~vGsvR~~~~~--~~~~~g~~G~~~~~~~~~~Erl~~ 95 (181)
++..+| ++|+++|+++| .|....++|.+.+..+++++--++..--++..... ..|..+ ...+.-|...
T Consensus 58 k~~~~v-~~~~~~v~~~l~~d~~~r~~Wd~~~~~~~vle~~~~~t~I~y~~~~~~~~~~v~~--------RDfv~~r~~~ 128 (221)
T 3p0l_A 58 RLEVVV-DQPMERLYEELVERMEAMGEWNPNVKEIKVLQKIGKDTFITHELAAEAAGNLVGP--------RDFVSVRCAK 128 (221)
T ss_dssp EEEEEE-SSCHHHHHHHHTTTGGGTTTSCTTCSEEEEEEECSSSEEEEEEEECC---CCSCC--------EEEEEEEEEE
T ss_pred EEEEEE-cCCHHHHHHHHHhccchhhhcCcchheEEEEEecCCCeEEEEEeeccccCCccCC--------ceEEEEEEEE
Confidence 556778 99999999987 68888999999999998765222111112222110 012111 1133333333
Q ss_pred EecCCCeEEEEEeecc-cc-------eeeEEEEEEEEEcCC---ceEEEEEEEEeeCCCCCHHHHH-HHHHHHHHHHHHH
Q 030202 96 INAEEMTLTYSIVDGN-VG-------FYGYVSTLTVAPKEN---GCYIEWKYEVEPVKGWRLEDLD-CFISSGLQVMARR 163 (181)
Q Consensus 96 ~D~~~~~~~y~v~~g~-~p-------~~~~~~t~~v~p~~~---gT~v~W~~~~~p~~~~~~~~~~-~~~~~gl~~l~~~ 163 (181)
.++....+...-++.+ .| ...+.+-+.+.|.++ +|+|+|....+|. |..+.-+. ..+..++-...+.
T Consensus 129 ~~~~~~vi~~~Sv~~~~~P~~~g~VR~~~~~~g~~i~p~~~~~~~t~vt~~~~~Dp~-G~iP~~lvn~~~~~~~~~~~~~ 207 (221)
T 3p0l_A 129 RRGSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKTKLTWLLSIDLK-GWLPKSIINQVLSQTQVDFANH 207 (221)
T ss_dssp ECSSCEEECCEECCCTTSCCCTTSEECEECSCEEEEEEETTEEEEEEEEEEECEECC-SSCCHHHHHHHHHHHHHHHHHH
T ss_pred EcCCeEEEEEEeccCCCCCCCCCeEEEeccceEEEEEECCCCCCcEEEEEEEEecCC-CCCCHHHHHHHHHHHHHHHHHH
Confidence 3332222222222222 12 224456788899874 4999999999997 44555553 3334455555556
Q ss_pred HHHHHh
Q 030202 164 MKEALQ 169 (181)
Q Consensus 164 le~~~~ 169 (181)
|++++.
T Consensus 208 Lr~~~~ 213 (221)
T 3p0l_A 208 LRKRLE 213 (221)
T ss_dssp HHHHTC
T ss_pred HHHHHh
Confidence 666554
No 70
>2r55_A STAR-related lipid transfer protein 5; alpha and beta protein, cholesterol binding, structural GENO structural genomics consortium, SGC; 2.50A {Homo sapiens}
Probab=97.25 E-value=0.035 Score=43.38 Aligned_cols=143 Identities=13% Similarity=0.125 Sum_probs=80.7
Q ss_pred eEEEEEEeCCCHHHHHHHH--hccCCcccccccceeEEEecCCCCCCceE-EEEeeeec--CCCCCCCCCcCccceEEEE
Q 030202 18 GRACEELTGVKAEQIWAFL--EDFFGLDKWFPTLTTCIPIQGISGQPGCV-RFCAGFKT--PVDNKDDDHEQSVNWTKQK 92 (181)
Q Consensus 18 ~~v~~~I~~Ap~e~VW~~l--~Df~~~~~w~P~v~~~~~~~G~~~~vGsv-R~~~~~~~--~~~g~~G~~~~~~~~~~Er 92 (181)
=+++.+| ++|+++|++++ .|.....+|.+.+..+.+++--++. ..+ +.+..... |... ...+.-|
T Consensus 69 ~k~~~~v-~~~~~~v~~~l~~~d~~~r~~Wd~~~~~~~vle~i~~~-~~i~~~~~~~~~~~~v~~--------RDfv~~r 138 (231)
T 2r55_A 69 YRGEGIV-YGTLEEVWDCVKPAVGGLRVKWDENVTGFEIIQSITDT-LCVSRTSTPSAAMKLISP--------RDFVDLV 138 (231)
T ss_dssp EEEEEEE-SSCHHHHHHHHCC--CCSHHHHCTTCSEEEEEEECSSS-EEEEEEECCCBTTTTBCC--------EEEEEEE
T ss_pred EEEEEEE-CCCHHHHHHHHHhhCcchhhhhccccceeEEEEEcCCC-EEEEEEEeccccCCccCC--------CeEEEEE
Confidence 3567778 99999999999 8889889999999888876522211 222 22221000 1111 1133333
Q ss_pred EEEEecCC-CeEEEEEeecc-cc-------eeeEEEEEEEEEcC--C-ceEEEEEEEEeeCCCCCHHHH-HHHHHHHHHH
Q 030202 93 LLAINAEE-MTLTYSIVDGN-VG-------FYGYVSTLTVAPKE--N-GCYIEWKYEVEPVKGWRLEDL-DCFISSGLQV 159 (181)
Q Consensus 93 l~~~D~~~-~~~~y~v~~g~-~p-------~~~~~~t~~v~p~~--~-gT~v~W~~~~~p~~~~~~~~~-~~~~~~gl~~ 159 (181)
-...++.+ ..+...-++.+ .| ...+.+-+.+.|.+ + +|+|+|....+|.+ ..+..+ ..++..++-.
T Consensus 139 ~~~~~~~g~~vi~~~Sv~~~~~P~~~~~VR~~~~~~g~~i~p~~~~~~~t~vt~~~~~Dp~G-~iP~~lvn~~~~~~~~~ 217 (231)
T 2r55_A 139 LVKRYEDGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTFFHTDLSG-YLPQNVVDSFFPRSMTR 217 (231)
T ss_dssp EEEECTTSCEEEEEEECCCTTSCCCTTCEEEEECSEEEEEEECC--CCCEEEEEEECEECCS-SCCHHHHHHHHHHHHHH
T ss_pred EEEEcCCCEEEEEEEeccCCCCCCCCCCEEEEEEeeEEEEEEeCCCCCcEEEEEEEEeCCCC-CccHHHHHHHHhHhHHH
Confidence 33333332 22223323322 12 22344567788864 3 59999999999974 444444 3445556666
Q ss_pred HHHHHHHHHhhh
Q 030202 160 MARRMKEALQAY 171 (181)
Q Consensus 160 l~~~le~~~~~~ 171 (181)
..+.|++++.++
T Consensus 218 ~~~~Lr~~~~~~ 229 (231)
T 2r55_A 218 FYANLQKAVKQF 229 (231)
T ss_dssp HHHHHHHHHHGG
T ss_pred HHHHHHHHHHHh
Confidence 777777777655
No 71
>1em2_A MLN64 protein; beta barrel, lipid binding protein; HET: TAR; 2.20A {Homo sapiens} SCOP: d.129.3.2
Probab=97.17 E-value=0.023 Score=44.51 Aligned_cols=142 Identities=10% Similarity=0.033 Sum_probs=79.9
Q ss_pred EEEEEEeCCCHHHHH-HHHhccCCcccccccceeEEEecCCCCCCceEEEEeee--ecCCCCCCCCCcCccceEEEEEEE
Q 030202 19 RACEELTGVKAEQIW-AFLEDFFGLDKWFPTLTTCIPIQGISGQPGCVRFCAGF--KTPVDNKDDDHEQSVNWTKQKLLA 95 (181)
Q Consensus 19 ~v~~~I~~Ap~e~VW-~~l~Df~~~~~w~P~v~~~~~~~G~~~~vGsvR~~~~~--~~~~~g~~G~~~~~~~~~~Erl~~ 95 (181)
++..+| ++|+++|+ .++.|....++|.+.+..+.+++--+..---++.+... +.|... ...+.-|-..
T Consensus 69 k~~~~v-~~~~~~v~~~~~~d~~~r~~Wd~~~~~~~vle~~~~~t~I~~~~~~p~~~~~~~~--------RDfv~~r~~~ 139 (229)
T 1em2_A 69 ILKTFL-PCPAELVYQEVILQPERMVLWNKTVTACQILQRVEDNTLISYDVSAGAAGGVVSP--------RDFVNVRRIE 139 (229)
T ss_dssp EEEEEE-SSCHHHHHHHTTTCHHHHTTTCTTEEEEEEEEEETTTEEEEEEEECCBTTTTBCC--------EEEEEEEEEE
T ss_pred EEEEEe-cCCHHHHHHHHHhCccchhhcccccceEEEEEecCCCeEEEEEEecCcCCCCcCC--------CeeEEEEEEE
Confidence 566778 99999999 78889998899999999988765211111112222210 011111 1133333333
Q ss_pred EecCCCeEEEEEeecc-cc-------eeeEEEEEEEEEcC--C-ceEEEEEEEEeeCCCCCHHHH-HHHHHHHHHHHHHH
Q 030202 96 INAEEMTLTYSIVDGN-VG-------FYGYVSTLTVAPKE--N-GCYIEWKYEVEPVKGWRLEDL-DCFISSGLQVMARR 163 (181)
Q Consensus 96 ~D~~~~~~~y~v~~g~-~p-------~~~~~~t~~v~p~~--~-gT~v~W~~~~~p~~~~~~~~~-~~~~~~gl~~l~~~ 163 (181)
.++....+...-++.+ .| ...+.+.+.+.|.+ + +|.|+|....+|.+ ..+..+ ..++..++-.+.+.
T Consensus 140 ~~~~~~vi~~~Sv~~~~~P~~~~~VR~~~~~~g~~i~p~~~~~~~t~vt~~~~~Dp~G-~iP~~l~n~~~~~~~~~~~~~ 218 (229)
T 1em2_A 140 RRRDRYLSSGIATSHSAKPPTHKYVRGENGPGGMIVLKSASNPRVCTFVWILNTDLKG-RLPRYLIHQSLAATMFEFAFH 218 (229)
T ss_dssp ECSSEEEEEEEECCCTTSCCCTTSEECEECSEEEEEEECSSCTTCEEEEEEECEECCS-SSCHHHHHHHHHHHHHHHHHH
T ss_pred EcCCEEEEEEecccCCCCCCCCCCEeeeecccEEEEEecCCCCCcEEEEEEEEECCCC-CCCHHHHHHHHHHHHHHHHHH
Confidence 3333333322223222 12 22445678888864 3 49999999999974 444444 34455555556666
Q ss_pred HHHHHhh
Q 030202 164 MKEALQA 170 (181)
Q Consensus 164 le~~~~~ 170 (181)
|.+++.+
T Consensus 219 Lr~~~~~ 225 (229)
T 1em2_A 219 LRQRISE 225 (229)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666544
No 72
>2lio_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Bacteroides fragilis}
Probab=97.11 E-value=0.026 Score=41.37 Aligned_cols=117 Identities=13% Similarity=0.223 Sum_probs=71.2
Q ss_pred EEEEEeCCCH-HHHHHHHhccCCcccccccceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCccceEEEEEEEEec
Q 030202 20 ACEELTGVKA-EQIWAFLEDFFGLDKWFPTLTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLAINA 98 (181)
Q Consensus 20 v~~~I~~Ap~-e~VW~~l~Df~~~~~w~P~v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~~D~ 98 (181)
.++.| +||+ ++||++|++-.++.+|+..- +. ..|. ..++ .. ++. | ...-+|+++++
T Consensus 8 ~e~~i-~A~~~~~VW~~IStPegL~~Wfad~--v~-~~g~-----~~~F-~w-----~~~-~-------~~~~~v~~~~~ 64 (136)
T 2lio_A 8 LEYLL-NATSKNILWSAISTPTGLEDWFADK--VV-SDDK-----TVTF-CW-----GKT-E-------QRQAGIVAIRA 64 (136)
T ss_dssp EEEEE-CTTSCTHHHHGGGSHHHHTTTSSSE--EE-EETT-----EEEE-ES-----SSS-S-------EEEEEEEEEET
T ss_pred EEEEe-cCChHHHHHHHhCChhhhhcccCCC--Cc-ccCc-----eEEE-Ee-----CCC-C-------cEeEEEEEEcC
Confidence 56778 9999 99999999999999999742 11 2231 1222 22 110 2 56888999998
Q ss_pred CCCeEEEEEeecccceeeEEEEEEEEEcC--CceEEEEEEEEeeCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Q 030202 99 EEMTLTYSIVDGNVGFYGYVSTLTVAPKE--NGCYIEWKYEVEPVKGWRLEDLDCFISSGLQVMARRMKEALQ 169 (181)
Q Consensus 99 ~~~~~~y~v~~g~~p~~~~~~t~~v~p~~--~gT~v~W~~~~~p~~~~~~~~~~~~~~~gl~~l~~~le~~~~ 169 (181)
+++++|+=.... -.++..++++...+ +++.++-+ .|... ..... ...|=+.+..+|.+++.
T Consensus 65 -~~~i~FrW~~~~--~~~~~~e~~l~~~~~t~~~~L~vt-dFa~~-----~~~e~-~~~gW~~~l~~Lk~~lg 127 (136)
T 2lio_A 65 -YSFIRFHWLDDE--NERDYFEIKMSYNELTGDYVLEIT-DFSEA-----DEADD-LKELWDSQVSKLRRTCG 127 (136)
T ss_dssp -TTEEEEEESSSS--SSSCEEEEEEEECTTTSCEEEEEE-EEECH-----HHHHH-HHHHHHHHHHHHHHHTS
T ss_pred -CCEEEEEccCCC--CCceEEEEEEEecCCCCcEEEEEe-cCCCc-----cchhH-HHhhHHHHHHHHHHHhh
Confidence 678888865432 12245577887766 57877666 44421 12323 34444444456665553
No 73
>2e3n_A Lipid-transfer protein CERT; ceramide transfer, lipid transport; HET: 6CM; 1.40A {Homo sapiens} PDB: 2e3m_A* 2e3o_A* 2e3p_A* 2e3q_A* 2e3r_A* 2e3s_A 2z9y_A* 3h3q_A* 3h3r_A* 3h3s_A* 3h3t_A* 2z9z_A*
Probab=96.86 E-value=0.034 Score=44.22 Aligned_cols=36 Identities=11% Similarity=0.281 Sum_probs=31.2
Q ss_pred EEEEeCCCHHHHHHHHhccCCcccccccceeEEEec
Q 030202 21 CEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQ 56 (181)
Q Consensus 21 ~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~~~~~~~ 56 (181)
..+|.+++++.|++++.|++..++|.+.+..+++++
T Consensus 78 ~~~~~~~~~~~v~~~l~d~~~r~~Wd~~~~~~~vle 113 (255)
T 2e3n_A 78 THAVKGVTGHEVCNYFWNVDVRNDWETTIENFHVVE 113 (255)
T ss_dssp EEEEETCCHHHHHHHHHCGGGHHHHCCSEEEEEEEE
T ss_pred EEEEcCCCHHHHHHHHhCcchHhhhhhhcceeEEEE
Confidence 455536999999999999999999999999988775
No 74
>2pso_A STAR-related lipid transfer protein 13; alpha and beta protein, lipid binding, helix swapping, struc genomics, structural genomics consortium, SGC; 2.80A {Homo sapiens} SCOP: d.129.3.2
Probab=96.46 E-value=0.052 Score=43.06 Aligned_cols=136 Identities=10% Similarity=0.086 Sum_probs=74.1
Q ss_pred EEEEEEeCCCHHHHHH-HHhccCCcccccccceeEEEecCCCCCCceE-EEEeeeecCCCCCCCCCcCccceEEEEEEEE
Q 030202 19 RACEELTGVKAEQIWA-FLEDFFGLDKWFPTLTTCIPIQGISGQPGCV-RFCAGFKTPVDNKDDDHEQSVNWTKQKLLAI 96 (181)
Q Consensus 19 ~v~~~I~~Ap~e~VW~-~l~Df~~~~~w~P~v~~~~~~~G~~~~vGsv-R~~~~~~~~~~g~~G~~~~~~~~~~Erl~~~ 96 (181)
+++.+| ++++++++. ++.| .++|.+.+..+++++--+... .+ +...-...|... ...+.-|-...
T Consensus 78 K~~~~v-~~~~~~v~~~ll~d---r~~Wd~~~~~~~vle~id~~~-~I~y~~~~~p~p~~~--------RDfv~~r~~r~ 144 (237)
T 2pso_A 78 KASVEV-EAPPSVVLNRVLRE---RHLWDEDFVQWKVVETLDRQT-EIYQYVLNSMAPHPS--------RDFVVLRTWKT 144 (237)
T ss_dssp EEEEEE-SSCHHHHHHHHHHC---GGGTCTTBCCCEEEEEEETTE-EEEEEEECCSSSCCC--------EEEEEEEEEES
T ss_pred EEEEEE-cCChHHHHHHHHhh---hhhHHhhhceEEEEEEcCCCc-EEEEEEecCCCCcCC--------eEEEEEEEEEE
Confidence 567788 999999875 6677 689999998887765211111 12 222111112111 11333333222
Q ss_pred --ecCCCeEEEEEeecc-cc------eeeEEEEEEEEEcCC-ceEEEEEEEEeeCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 030202 97 --NAEEMTLTYSIVDGN-VG------FYGYVSTLTVAPKEN-GCYIEWKYEVEPVKGWRLEDLDCFISSGLQVMARRMKE 166 (181)
Q Consensus 97 --D~~~~~~~y~v~~g~-~p------~~~~~~t~~v~p~~~-gT~v~W~~~~~p~~~~~~~~~~~~~~~gl~~l~~~le~ 166 (181)
++....+..+-++.+ .| ...+.+.+.+.|.++ +|+|+|....+|. |..+.-+...+...+-...+.|.+
T Consensus 145 ~~~~g~~vi~~~Sv~h~~~P~~g~VR~~~~~~g~~i~P~~~~~t~vt~~~~~Dp~-G~iP~~ln~~~~~~~~~~l~~LR~ 223 (237)
T 2pso_A 145 DLPKGMCTLVSLSVEHEEAQLLGGVRAVVMDSQYLIEPCGSGKSRLTHICRIDLK-GHSPEWYSKGFGHLCAAEVARIRN 223 (237)
T ss_dssp CCGGGCEEEEEEECCCTTCCCCSSEECCEEEEEEEEEECSTTCEEEEEEEEECCS-SSCTTTTTTHHHHHHHHHHHHHHH
T ss_pred ECCCCEEEEEEEcccCCCCCCCCcEEEEEeccEEEEEECCCCCEEEEEEEEeCCC-CCchHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444432 12 335677888999875 5999999999997 444443433333333334444444
Q ss_pred HH
Q 030202 167 AL 168 (181)
Q Consensus 167 ~~ 168 (181)
++
T Consensus 224 ~~ 225 (237)
T 2pso_A 224 SF 225 (237)
T ss_dssp TT
T ss_pred HH
Confidence 43
No 75
>3fo5_A Thioesterase, adipose associated, isoform BFIT2; orthogonal bundle, consortium, lipid transport; HET: 1PE TCE; 2.00A {Homo sapiens}
Probab=96.21 E-value=0.09 Score=42.50 Aligned_cols=112 Identities=10% Similarity=0.052 Sum_probs=67.2
Q ss_pred EEEEEEeCCCHHHHHHHHhccCCcccccccceeEEEec--CCCCCCceEEEEeeeecCCCCCCCCCcCccceEEEEEEEE
Q 030202 19 RACEELTGVKAEQIWAFLEDFFGLDKWFPTLTTCIPIQ--GISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLAI 96 (181)
Q Consensus 19 ~v~~~I~~Ap~e~VW~~l~Df~~~~~w~P~v~~~~~~~--G~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~~ 96 (181)
+++.+| ++|++.||++|.|....++|.+.+..+.+++ +++ .. +..+.. |..+ +. .+..-.+.-|-...
T Consensus 91 k~~~~v-~~~~~~v~~~L~D~~~R~~WD~~~~~~~vle~id~~-~i--vY~~~~---p~~~--~~-v~~RDFV~lr~~r~ 160 (258)
T 3fo5_A 91 HMEMVV-HVDAAQAFLLLSDLRQRPEWDKHYRSVELVQQVDED-DA--IYHVTS---PALG--GH-TKPQDFVILASRRK 160 (258)
T ss_dssp EEEEEE-SSCHHHHHHHHHCGGGGGGTCTTCCEEEEEEEEETT-EE--EEEEEE---CCCT--TC-SSCEEEEEEEEEEC
T ss_pred EEEEEE-eCCHHHHHHHHhCchhHhHhhhhccEEEEEEEcCCC-eE--EEEEec---CCcc--CC-CCCCEEEEEEEEEe
Confidence 577788 9999999999999999999999999998764 222 22 333322 1110 00 01111333333221
Q ss_pred -ecCC--CeEEEEEeecc-cc-------eeeEEEEEEEEEcCC-ceEEEEEEEEee
Q 030202 97 -NAEE--MTLTYSIVDGN-VG-------FYGYVSTLTVAPKEN-GCYIEWKYEVEP 140 (181)
Q Consensus 97 -D~~~--~~~~y~v~~g~-~p-------~~~~~~t~~v~p~~~-gT~v~W~~~~~p 140 (181)
.+.+ ..+...-+..+ .| ...+.+-+.+.|.++ +|+|+|....+|
T Consensus 161 ~~~~G~~yvi~~~SV~hp~~Pp~~g~VR~~~~~sg~~I~P~~~~~t~VtY~~q~dp 216 (258)
T 3fo5_A 161 PCDNGDPYVIALRSVTLPTHRETPEYRRGETLCSGFCLWREGDQLTKVSYYNQATP 216 (258)
T ss_dssp CSSTTCCEEEEEEEEECTTSCCCTTSEECCCSSEEEEEEEEETTEEEEEEEESCCG
T ss_pred ccCCCCEEEEEEEeccCCCCCCCCCCEEEEEcCcEEEEEECCCCCEEEEEEEeeCC
Confidence 2222 33443333322 22 235667889999886 499999988888
No 76
>2ffs_A Hypothetical protein PA1206; 7-stranded beta sheet, C-terminal helix, structural genomics protein structure initiative; HET: MSE; 2.50A {Pseudomonas aeruginosa} SCOP: d.129.3.7
Probab=94.84 E-value=0.88 Score=34.05 Aligned_cols=126 Identities=12% Similarity=-0.013 Sum_probs=76.6
Q ss_pred CCHHHHHHHH-hccCCcccccccceeEEEecCCCCCCceEEEEeeeecCCCCCCCCCcCccceEEEEEEEEecCCCeEEE
Q 030202 27 VKAEQIWAFL-EDFFGLDKWFPTLTTCIPIQGISGQPGCVRFCAGFKTPVDNKDDDHEQSVNWTKQKLLAINAEEMTLTY 105 (181)
Q Consensus 27 Ap~e~VW~~l-~Df~~~~~w~P~v~~~~~~~G~~~~vGsvR~~~~~~~~~~g~~G~~~~~~~~~~Erl~~~D~~~~~~~y 105 (181)
...+++|+-| .-..+-..+.|++.+|++++..++ .-.|.+.+ + + ..++|+++.+ + ..++.|
T Consensus 20 LTr~QlW~GL~~kar~p~~Fvp~i~~c~Vlse~~~--~~~R~l~f------g--~------~~i~e~vtl~-~-~~~v~f 81 (157)
T 2ffs_A 20 LDRLQLWEGLVCRAREPQYFVVGLERFEILVDDGD--RLHRRLYL------P--G------LVVEDEVVLK-A-PDSAHY 81 (157)
T ss_dssp CCHHHHHHHHHHHHHCGGGTCTTCCEEEEEEECSS--EEEEEEEE------T--T------EEEEEEEEEE-T-TTEEEE
T ss_pred cCHHHHHHHHHHHhcChhhcccccCeEEEEecCCC--eEEEEEEE------C--C------CccceEEEEc-C-CcEEEE
Confidence 3468999854 456666778999999999864322 46788887 2 2 1688888765 3 578999
Q ss_pred EEeecccceeeEEEEEEEEEcCCc-eEEEEEEEEeeCC-----CCCHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 030202 106 SIVDGNVGFYGYVSTLTVAPKENG-CYIEWKYEVEPVK-----GWRLEDLDCFISSGLQVMARRMKEALQAY 171 (181)
Q Consensus 106 ~v~~g~~p~~~~~~t~~v~p~~~g-T~v~W~~~~~p~~-----~~~~~~~~~~~~~gl~~l~~~le~~~~~~ 171 (181)
.+....-+ .+..-++.+....+| =.+++.++..... ....+..+..|+.+....-+.+.+.+..+
T Consensus 82 ~~~~t~~~-~gs~ltn~Iee~~~g~L~lrF~ye~~~p~~s~e~~~~~~~~~~ay~~ad~~Tv~~iRel~~~g 152 (157)
T 2ffs_A 82 SIKPSAEV-AGGSLDMTIEEPEPGSLFVRFAYCTRYLQPLGDELPYDAFVKQAYIAMDVETIATIRDRFGAS 152 (157)
T ss_dssp EECCCSSS-BEEEEEEEEEEEETTEEEEEEEEEEECSCC--CCCCCBHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred EcccccCC-CCceEEEEEeeCCCCcEEEEEEEEccCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 88762111 122334555543345 4455555544221 11223346778888777777777776544
No 77
>2l5r_A Antimicrobial peptide alyteserin-1C; alpha helix, antimicrobial protein; NMR {Alytes obstetricans}
Probab=49.51 E-value=21 Score=17.78 Aligned_cols=22 Identities=14% Similarity=0.333 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh
Q 030202 149 LDCFISSGLQVMARRMKEALQA 170 (181)
Q Consensus 149 ~~~~~~~gl~~l~~~le~~~~~ 170 (181)
++.+|++||..|.+.+.+++.+
T Consensus 2 lkeifkaglgslvkgiaahvas 23 (26)
T 2l5r_A 2 LKEIFKAGLGSLVKGIAAHVAS 23 (26)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHhHHHHHHHHHHHHhh
Confidence 4677899999999988887643
No 78
>2iqi_A Hypothetical protein XCC0632; structural genomics, PSI-2, protein structure initiative; 2.70A {Xanthomonas campestris PV} SCOP: c.51.6.2
Probab=29.14 E-value=1.7e+02 Score=21.34 Aligned_cols=53 Identities=6% Similarity=0.031 Sum_probs=37.0
Q ss_pred EEEEEEEEEcCCceEE-EEEEEEe-eCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Q 030202 117 YVSTLTVAPKENGCYI-EWKYEVE-PVKGWRLEDLDCFISSGLQVMARRMKEALQ 169 (181)
Q Consensus 117 ~~~t~~v~p~~~gT~v-~W~~~~~-p~~~~~~~~~~~~~~~gl~~l~~~le~~~~ 169 (181)
....++|....++..+ .-.|++. |..+.....+...+..+++.+++.|.+.+.
T Consensus 124 v~~~~~L~~~~~~~~~~~~~f~~~~p~~~~~~~a~V~A~~~a~~~la~~Ia~w~~ 178 (192)
T 2iqi_A 124 IELNAKLLHSSDQRVVASRTFTVARPSSSTDTAAVAAAFEQALTQVTTELVGWTL 178 (192)
T ss_dssp EEEEEEEEETTTTEEEEEEEEEEEEECSSSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEeCCCCeEEEEEEEEEEeECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556677665566555 6667766 666667788888888888888888776543
No 79
>1kmt_A RHO GDP-dissociation inhibitor 1; immunoglobulin fold, beta sandwich motif, isoprenyl-binding, protein binding; 1.30A {Homo sapiens} SCOP: b.1.18.8 PDB: 2jhu_A 2jhv_A 2jhw_A 1ft3_A 1ft0_A 1qvy_A 2jhz_A 2bxw_A 2jhx_A 2jhy_A 1rho_A 1fso_A 2ji0_A 2jhs_A* 2jht_A 1ajw_A 1gdf_A
Probab=21.67 E-value=2.3e+02 Score=20.33 Aligned_cols=54 Identities=7% Similarity=0.112 Sum_probs=35.6
Q ss_pred ceEEEEEEEEecCCCeEEEEEeeccc--c---eeeEEEEEEEEEcCCceEEEEEEEEee
Q 030202 87 NWTKQKLLAINAEEMTLTYSIVDGNV--G---FYGYVSTLTVAPKENGCYIEWKYEVEP 140 (181)
Q Consensus 87 ~~~~Erl~~~D~~~~~~~y~v~~g~~--p---~~~~~~t~~v~p~~~gT~v~W~~~~~p 140 (181)
...++-|-.|.|....+.|...+... + --.|.+..++...++.|.++|...|+-
T Consensus 77 dk~~~mlGsy~P~~e~y~~~~~~eeaPsG~laRG~Y~a~s~F~DDD~~~hl~~~w~feI 135 (141)
T 1kmt_A 77 DKTDYMVGSYGPRAAAYEFLTPVEEAPKGMLARGSYSIKSRFTDDDKTDHLSWEWNLTI 135 (141)
T ss_dssp EEEEEEEEEECCCSSCEEEECCCEECCCSTTTCEEEEEEEEEECTTCCCSEEEEEEEEE
T ss_pred CcceEeeeccCCCCCcceecCCCccCCceeEEeeeeeeeEEEEcCCCcEEEEEEEeEEE
Confidence 35667788888866667776654322 2 237888888887655677777666654
No 80
>1doa_B RHO GDI 1, protein (GDP-dissociation inhibitor 1); GTP-binding protein, CDC42, cell cycle; HET: GDP GER; 2.60A {Bos taurus} SCOP: b.1.18.8 PDB: 1hh4_D* 1cc0_E*
Probab=20.39 E-value=3e+02 Score=21.28 Aligned_cols=53 Identities=8% Similarity=0.082 Sum_probs=34.7
Q ss_pred eEEEEEEEEecCCCeEEEEEeeccc--c--e-eeEEEEEEEEEcCCceEEEEEEEEee
Q 030202 88 WTKQKLLAINAEEMTLTYSIVDGNV--G--F-YGYVSTLTVAPKENGCYIEWKYEVEP 140 (181)
Q Consensus 88 ~~~Erl~~~D~~~~~~~y~v~~g~~--p--~-~~~~~t~~v~p~~~gT~v~W~~~~~p 140 (181)
..++-|-.|-|....+.|...+... + . -.|.+..+|+..++.|.++|.+.|+-
T Consensus 156 k~~~MlGSY~P~~e~y~~~~p~EeAPSGmLARG~Y~akSkF~DDD~~~hL~~eWsfeI 213 (219)
T 1doa_B 156 KTDYMVGSYGPRAEEYEFLTPMEEAPKGMLARGSYNIKSRFTDDDRTDHLSWEWNLTI 213 (219)
T ss_dssp EEEEEEEEECCCSSCEEEECCCEECCCTTSCCSEEEEEEEEECTTCCCCEEEEEEEEE
T ss_pred CcceeeeccCCCCCcccccCCCccCCccceeeeeeeeeEEEEeCCCceEEEEEEEEEE
Confidence 4556677787766667776554322 2 2 27888888886555588777766664
Done!