BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>030207
METETQLEASQNDIPQQESKKLDAINDIPQQESKKLDARNDIPQQESKKLNFSNLTFRIW
PPAQRTRDAVIARLIETLTTPSVLSKRYGAMPTDEADFTARFIENDAFSVADAAASAEDD
GIEVLQVYSKEISKRMLEAVKSRSSAAASGISSGVDDTTSPAQPAGGPNEESVSSSVETE
G

High Scoring Gene Products

Symbol, full name Information P value
MAF1
MFP1 attachment factor 1
protein from Solanum lycopersicum 1.8e-23
WPP2
AT1G47200
protein from Arabidopsis thaliana 1.0e-22
WPP1
WPP domain protein 1
protein from Arabidopsis thaliana 6.3e-21
WPP3
AT5G27940
protein from Arabidopsis thaliana 7.1e-13
RANGAP1
AT3G63130
protein from Arabidopsis thaliana 2.0e-09
RANGAP2
AT5G19320
protein from Arabidopsis thaliana 1.8e-07

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  030207
        (181 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

UNIPROTKB|Q9M7N6 - symbol:MAF1 "MFP1 attachment factor 1"...   270  1.8e-23   1
TAIR|locus:2036736 - symbol:WPP2 "AT1G47200" species:3702...   263  1.0e-22   1
TAIR|locus:2167831 - symbol:WPP1 "WPP domain protein 1" s...   246  6.3e-21   1
TAIR|locus:2143749 - symbol:WPP3 "AT5G27940" species:3702...   170  7.1e-13   1
TAIR|locus:2099207 - symbol:RANGAP1 "AT3G63130" species:3...   147  2.0e-09   1
TAIR|locus:2150285 - symbol:RANGAP2 "AT5G19320" species:3...   129  1.8e-07   1


>UNIPROTKB|Q9M7N6 [details] [associations]
            symbol:MAF1 "MFP1 attachment factor 1" species:4081
            "Solanum lycopersicum" [GO:0005515 "protein binding" evidence=IPI]
            GO:GO:0005794 GO:GO:0005635 GO:GO:0016363 EMBL:AF118113
            RefSeq:NP_001234193.1 UniGene:Les.13671 IntAct:Q9M7N6
            EnsemblPlants:Solyc04g078380.1.1 GeneID:543586 InterPro:IPR025265
            Pfam:PF13943 Uniprot:Q9M7N6
        Length = 152

 Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
 Identities = 53/86 (61%), Positives = 61/86 (70%)

Query:    56 TFRIWPPAQRTRDAVIARLIETLTTPSVLSKRYGAMPTDEADFTARFIENXXXXXXXXXX 115
             +F IWPP QRTRDAVI RLIE+L+TPS+LSKRYG +P DEA  TAR IE           
Sbjct:    25 SFSIWPPTQRTRDAVINRLIESLSTPSILSKRYGTLPQDEASETARLIEEEAFAAAGSTA 84

Query:   116 XXXXXGIEVLQVYSKEISKRMLEAVK 141
                  GIE+LQVYSKEISKRM++ VK
Sbjct:    85 SDADDGIEILQVYSKEISKRMIDTVK 110


>TAIR|locus:2036736 [details] [associations]
            symbol:WPP2 "AT1G47200" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0005640 "nuclear outer membrane"
            evidence=IDA] [GO:0007067 "mitosis" evidence=RCA;IMP] [GO:0048527
            "lateral root development" evidence=RCA;IMP] [GO:0005886 "plasma
            membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
            [GO:0006913 "nucleocytoplasmic transport" evidence=RCA]
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886
            GO:GO:0005794 GO:GO:0007067 GO:GO:0048527 EMBL:AC083835
            GO:GO:0005640 EMBL:AC079677 InterPro:IPR025265 Pfam:PF13943
            HOGENOM:HOG000239842 ProtClustDB:CLSN2686648 EMBL:AY072148
            EMBL:AY096476 EMBL:AY085683 IPI:IPI00529353 PIR:F96512
            RefSeq:NP_564498.1 UniGene:At.17221 IntAct:Q9C500 STRING:Q9C500
            PaxDb:Q9C500 PRIDE:Q9C500 EnsemblPlants:AT1G47200.1 GeneID:841123
            KEGG:ath:AT1G47200 TAIR:At1g47200 eggNOG:NOG262975
            InParanoid:Q9C500 OMA:EVSKDDA PhylomeDB:Q9C500
            Genevestigator:Q9C500 Uniprot:Q9C500
        Length = 180

 Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
 Identities = 55/128 (42%), Positives = 78/128 (60%)

Query:    15 PQQESKK-LDAINDIPQQESKKLDARNDIPQQESKKLNFSNLTFRIWPPAQRTRDAVIAR 73
             P+ ES   + A+ D   QE+   D   D+ ++   +     ++ RIWPP Q+TRDAV+ R
Sbjct:    17 PESESSTTISAMTDPTSQEAASKDT--DLTKEAESEKKPGGISLRIWPPTQKTRDAVLNR 74

Query:    74 LIETLTTPSVLSKRYGAMPTDEADFTARFIENXXXXXXXXXXXXXXXGIEVLQVYSKEIS 133
             LIETL+T S+LSKRYG + +D+A   A+ IE                GI++L++YSKEIS
Sbjct:    75 LIETLSTESILSKRYGTLKSDDATTVAKLIEEEAYGVASNAVSSDDDGIKILELYSKEIS 134

Query:   134 KRMLEAVK 141
             KRMLE+VK
Sbjct:   135 KRMLESVK 142


>TAIR|locus:2167831 [details] [associations]
            symbol:WPP1 "WPP domain protein 1" species:3702
            "Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
            [GO:0005640 "nuclear outer membrane" evidence=IDA] [GO:0048527
            "lateral root development" evidence=RCA;IMP] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005829 "cytosol" evidence=RCA]
            [GO:0006913 "nucleocytoplasmic transport" evidence=RCA]
            GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0048527
            GO:GO:0005640 GO:GO:0016363 EMBL:AB008267 InterPro:IPR025265
            Pfam:PF13943 EMBL:BT025708 EMBL:AY088852 IPI:IPI00524927
            RefSeq:NP_199121.1 UniGene:At.30141 IntAct:Q9FMH6 STRING:Q9FMH6
            PaxDb:Q9FMH6 PRIDE:Q9FMH6 EnsemblPlants:AT5G43070.1 GeneID:834323
            KEGG:ath:AT5G43070 TAIR:At5g43070 eggNOG:NOG319401
            HOGENOM:HOG000239842 InParanoid:Q9FMH6 OMA:PSERTRD PhylomeDB:Q9FMH6
            ProtClustDB:CLSN2686648 Genevestigator:Q9FMH6 Uniprot:Q9FMH6
        Length = 155

 Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
 Identities = 51/101 (50%), Positives = 69/101 (68%)

Query:    42 IPQQESKKL-NFSNLTFRIWPPAQRTRDAVIARLIETLTTPSVLSKRYGAMPTDEADFTA 100
             +P  E++K  N   ++ RIWPP Q+TRDAVI RLIETL+T S+LSKR+G++ ++EA   A
Sbjct:    26 LPTTETEKNPNPVTISLRIWPPTQKTRDAVINRLIETLSTESILSKRFGSLESEEASSVA 85

Query:   101 RFIENXXXXXXXXXXXXXXXGIEVLQVYSKEISKRMLEAVK 141
             + IE+               GIE+L+ YSKEISKRMLE+VK
Sbjct:    86 KSIEDEAYAIASATVFGDDDGIEILKAYSKEISKRMLESVK 126


>TAIR|locus:2143749 [details] [associations]
            symbol:WPP3 "AT5G27940" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
            GenomeReviews:BA000015_GR InterPro:IPR025265 Pfam:PF13943
            EMBL:AC007399 HOGENOM:HOG000239842 EMBL:BT030603 EMBL:AK228812
            EMBL:AY085851 IPI:IPI00521488 RefSeq:NP_568504.1 UniGene:At.30777
            IntAct:Q0WQ91 PRIDE:Q0WQ91 EnsemblPlants:AT5G27940.1 GeneID:832861
            KEGG:ath:AT5G27940 TAIR:At5g27940 eggNOG:KOG0305 InParanoid:Q0WQ91
            OMA:YKYGTIK PhylomeDB:Q0WQ91 Genevestigator:Q0WQ91 Uniprot:Q0WQ91
        Length = 157

 Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
 Identities = 41/127 (32%), Positives = 69/127 (54%)

Query:    15 PQQESKKLDAINDIPQQESKKLDARNDIPQQESKKLNFSNLTFRIWPPAQRTRDAVIARL 74
             PQ ES+  D  + + +  S   DA +++ ++E        + F +WPP Q++RD V+  +
Sbjct:    17 PQLESRS-DETSCLQKHRS---DATSEVTKEEKS----GGILFSVWPPCQKSRDYVVNSM 68

Query:    75 IETLTTPSVLSKRYGAMPTDEADFTARFIENXXXXXXXXXXXXXXXGIEVLQVYSKEISK 134
             I+TL+T S+LS +YG +  +EA   A+ IE                GI+ L+VY  E S+
Sbjct:    69 IKTLSTDSILSYKYGTIKPEEASAVAKSIEEKAYDIASRFVSSD--GIKNLEVYGIETSE 126

Query:   135 RMLEAVK 141
             RM+E+ +
Sbjct:   127 RMIESAE 133


>TAIR|locus:2099207 [details] [associations]
            symbol:RANGAP1 "AT3G63130" species:3702 "Arabidopsis
            thaliana" [GO:0005098 "Ran GTPase activator activity" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISM] [GO:0000072 "M phase specific
            microtubule process" evidence=TAS] [GO:0005635 "nuclear envelope"
            evidence=IDA] [GO:0006606 "protein import into nucleus"
            evidence=RCA;TAS] [GO:0009507 "chloroplast" evidence=IDA]
            [GO:0009504 "cell plate" evidence=IDA] [GO:0005886 "plasma
            membrane" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0000910 "cytokinesis" evidence=IMP] [GO:0032153 "cell division
            site" evidence=IDA] [GO:0000280 "nuclear division" evidence=RCA]
            [GO:0000911 "cytokinesis by cell plate formation" evidence=RCA]
            [GO:0006346 "methylation-dependent chromatin silencing"
            evidence=RCA] [GO:0006406 "mRNA export from nucleus" evidence=RCA]
            [GO:0006913 "nucleocytoplasmic transport" evidence=RCA] [GO:0007000
            "nucleolus organization" evidence=RCA] [GO:0009407 "toxin catabolic
            process" evidence=RCA] [GO:0031048 "chromatin silencing by small
            RNA" evidence=RCA] [GO:0048527 "lateral root development"
            evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
            GO:GO:0005886 GO:GO:0009507 GO:GO:0005635 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0005819 GO:GO:0032153 GO:GO:0005096
            GO:GO:0043547 GO:GO:0031965 GO:GO:0000910 GO:GO:0006606
            GO:GO:0009524 GO:GO:0009504 EMBL:AL163816 UniGene:At.48804
            UniGene:At.5159 GO:GO:0000072 InterPro:IPR025265 Pfam:PF13943
            EMBL:AF214559 EMBL:AY034918 EMBL:AY150448 IPI:IPI00544809
            PIR:T48102 RefSeq:NP_001190166.1 RefSeq:NP_191872.1 HSSP:P41391
            ProteinModelPortal:Q9LE82 SMR:Q9LE82 DIP:DIP-46423N IntAct:Q9LE82
            STRING:Q9LE82 PaxDb:Q9LE82 PRIDE:Q9LE82 EnsemblPlants:AT3G63130.1
            EnsemblPlants:AT3G63130.2 GeneID:825488 KEGG:ath:AT3G63130
            TAIR:At3g63130 eggNOG:COG5238 HOGENOM:HOG000241563
            InParanoid:Q9LE82 KO:K14319 OMA:DFQPRTF PhylomeDB:Q9LE82
            ProtClustDB:CLSN2684304 Genevestigator:Q9LE82 Uniprot:Q9LE82
        Length = 535

 Score = 147 (56.8 bits), Expect = 2.0e-09, P = 2.0e-09
 Identities = 29/89 (32%), Positives = 51/89 (57%)

Query:    55 LTFRIWPPAQRTRDAVIARLIETLTTPSVLSKRYGAMPTDEADFTARFIENXXXXXXXXX 114
             L+ ++WPP++ TR  ++ R+ + +TTPS+ S++YG +  +EA+  A+ IE+         
Sbjct:    13 LSVKMWPPSKSTRLMLVERMTKNITTPSIFSRKYGLLSVEEAEQDAKRIEDLAFATANKH 72

Query:   115 XXXX--XXGIEVLQVYSKEISKRMLEAVK 141
                     G   + VY+KE SK ML+ +K
Sbjct:    73 FQNEPDGDGTSAVHVYAKESSKLMLDVIK 101


>TAIR|locus:2150285 [details] [associations]
            symbol:RANGAP2 "AT5G19320" species:3702 "Arabidopsis
            thaliana" [GO:0005098 "Ran GTPase activator activity" evidence=ISS]
            [GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0005635 "nuclear
            envelope" evidence=IDA] [GO:0006913 "nucleocytoplasmic transport"
            evidence=RCA;TAS] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
            [GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0009651 "response
            to salt stress" evidence=IEP] [GO:0009407 "toxin catabolic process"
            evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
            [GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0048527
            "lateral root development" evidence=RCA] GO:GO:0005783
            GO:GO:0005774 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507
            GO:GO:0005635 GO:GO:0005819 GO:GO:0005096 GO:GO:0043547
            GO:GO:0009651 GO:GO:0031965 GO:GO:0006913 EMBL:AF296837
            GO:GO:0009524 InterPro:IPR025265 Pfam:PF13943 HOGENOM:HOG000241563
            KO:K14319 ProtClustDB:CLSN2684304 EMBL:AF214560 IPI:IPI00541783
            PIR:T52068 RefSeq:NP_197433.1 UniGene:At.11887
            ProteinModelPortal:Q9M651 SMR:Q9M651 IntAct:Q9M651 STRING:Q9M651
            PaxDb:Q9M651 PRIDE:Q9M651 EnsemblPlants:AT5G19320.1 GeneID:832052
            KEGG:ath:AT5G19320 TAIR:At5g19320 eggNOG:NOG313064
            InParanoid:Q9M651 OMA:NTIGIEA PhylomeDB:Q9M651
            Genevestigator:Q9M651 Uniprot:Q9M651
        Length = 545

 Score = 129 (50.5 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 28/110 (25%), Positives = 54/110 (49%)

Query:    56 TFRIWPPAQRTRDAVIARLIETLTTPSVLSKRYGAMPTDEADFTARFIENXXXXXXXXXX 115
             + ++WPP+  TR A+I R+    ++ ++ +++YG++  D+A   A+ IE+          
Sbjct:    13 SIKLWPPSLPTRKALIERITNNFSSKTIFTEKYGSLTKDQATENAKRIEDIAFSTANQQF 72

Query:   116 XXXXXGI--EVLQVYSKEISKRMLEAVKXXXXXXXXXXXXXVDDTTSPAQ 163
                  G     +Q+Y+KE SK +LE +K              +D+ SP +
Sbjct:    73 EREPDGDGGSAVQLYAKECSKLILEVLKKGPVAKVAARELISEDSVSPRE 122


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.310   0.127   0.346    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      181       142   0.00091  102 3  11 23  0.39    32
                                                     30  0.47    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  515 (55 KB)
  Total size of DFA:  104 KB (2072 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.05u 0.18s 13.23t   Elapsed:  00:00:00
  Total cpu time:  13.05u 0.18s 13.23t   Elapsed:  00:00:00
  Start:  Fri May 10 13:30:28 2013   End:  Fri May 10 13:30:28 2013

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