BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030209
(181 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|357509159|ref|XP_003624868.1| Proteasome subunit beta type [Medicago truncatula]
gi|355499883|gb|AES81086.1| Proteasome subunit beta type [Medicago truncatula]
Length = 204
Score = 259 bits (661), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 130/178 (73%), Positives = 145/178 (81%), Gaps = 6/178 (3%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHD+LFIGLSGLATDS
Sbjct: 1 MSIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIGLSGLATDS 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKPETFASLVS++ YEKRFGPYFCQPVIAGL D+DKPFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSSMQYEKRFGPYFCQPVIAGLGDDDKPFI 120
Query: 121 CTMDSIGAKYVGSLQKILLLLELLESLFMVPVRQCSSLIWNPMSCLKLYLKLCYHLLT 178
CTMD+IGAK + + ++ ESL+ C S+ M +L+ + LL+
Sbjct: 121 CTMDAIGAKELA--KDFVVAGTASESLYGA----CESMFKPDMEAEELFETISQALLS 172
>gi|388491594|gb|AFK33863.1| unknown [Medicago truncatula]
Length = 206
Score = 259 bits (661), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 130/178 (73%), Positives = 145/178 (81%), Gaps = 6/178 (3%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHD+LFIGLSGLATDS
Sbjct: 1 MSIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIGLSGLATDS 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKPETFASLVS++ YEKRFGPYFCQPVIAGL D+DKPFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSSMQYEKRFGPYFCQPVIAGLGDDDKPFI 120
Query: 121 CTMDSIGAKYVGSLQKILLLLELLESLFMVPVRQCSSLIWNPMSCLKLYLKLCYHLLT 178
CTMD+IGAK + + ++ ESL+ C S+ M +L+ + LL+
Sbjct: 121 CTMDAIGAKELA--KDFVVAGTASESLYGA----CESMFKPDMEAEELFETISQALLS 172
>gi|388513745|gb|AFK44934.1| unknown [Medicago truncatula]
Length = 204
Score = 258 bits (659), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 129/178 (72%), Positives = 145/178 (81%), Gaps = 6/178 (3%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHD+LFIGLSGLATDS
Sbjct: 1 MSIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIGLSGLATDS 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDM+PETFASLVS++ YEKRFGPYFCQPVIAGL D+DKPFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMRPETFASLVSSMQYEKRFGPYFCQPVIAGLGDDDKPFI 120
Query: 121 CTMDSIGAKYVGSLQKILLLLELLESLFMVPVRQCSSLIWNPMSCLKLYLKLCYHLLT 178
CTMD+IGAK + + ++ ESL+ C S+ M +L+ + LL+
Sbjct: 121 CTMDAIGAKELA--KDFVVAGTASESLYGA----CESMFKPDMEAEELFETISQALLS 172
>gi|255558626|ref|XP_002520338.1| proteasome subunit beta type, putative [Ricinus communis]
gi|223540557|gb|EEF42124.1| proteasome subunit beta type, putative [Ricinus communis]
Length = 204
Score = 258 bits (658), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 122/129 (94%), Positives = 126/129 (97%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSAL+AMVGKNCFAIASDRRLGVQLQTIATDFQRI KIHDRLF+GLSGLATD+
Sbjct: 1 MSIFEYNGSALIAMVGKNCFAIASDRRLGVQLQTIATDFQRIYKIHDRLFLGLSGLATDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDM PETFASLVSALLYEKRFGPYFCQPVIAGLSDE+KPFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMNPETFASLVSALLYEKRFGPYFCQPVIAGLSDENKPFI 120
Query: 121 CTMDSIGAK 129
CTMDSIGAK
Sbjct: 121 CTMDSIGAK 129
>gi|388521659|gb|AFK48891.1| unknown [Lotus japonicus]
Length = 204
Score = 257 bits (657), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 121/129 (93%), Positives = 126/129 (97%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSALVAMVGKNCFA+ASDRRLGVQLQTIATDFQRISKIHD+LFIGLSGLATD+
Sbjct: 1 MSIFEYNGSALVAMVGKNCFAVASDRRLGVQLQTIATDFQRISKIHDKLFIGLSGLATDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKPETFASLVS++LYEKRFGPYFCQPVIAGL DEDKPFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSSILYEKRFGPYFCQPVIAGLGDEDKPFI 120
Query: 121 CTMDSIGAK 129
CTMD IGAK
Sbjct: 121 CTMDCIGAK 129
>gi|351723417|ref|NP_001237278.1| uncharacterized protein LOC100306084 [Glycine max]
gi|255627485|gb|ACU14087.1| unknown [Glycine max]
Length = 204
Score = 256 bits (655), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 129/178 (72%), Positives = 146/178 (82%), Gaps = 6/178 (3%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHD+LFIGLSGLATD+
Sbjct: 1 MSIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIGLSGLATDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRL+FRHKLYQLREERDMKP+TFASLVSA+LYEKRFGPYFCQPVIAGL D+DKPFI
Sbjct: 61 QTLYQRLLFRHKLYQLREERDMKPQTFASLVSAILYEKRFGPYFCQPVIAGLGDDDKPFI 120
Query: 121 CTMDSIGAKYVGSLQKILLLLELLESLFMVPVRQCSSLIWNPMSCLKLYLKLCYHLLT 178
CTMD+IGAK + + ++ ESL+ C S+ M +L+ + LL+
Sbjct: 121 CTMDAIGAKELA--KDFVVAGTASESLYGA----CESMFKPDMEPEELFETISQALLS 172
>gi|18395025|ref|NP_564149.1| proteasome subunit beta type-3-A [Arabidopsis thaliana]
gi|288558823|sp|Q9XI05.2|PSB3A_ARATH RecName: Full=Proteasome subunit beta type-3-A; AltName: Full=20S
proteasome beta subunit C-1; AltName: Full=Proteasome
component T
gi|17473525|gb|AAL38246.1| proteasome subunit [Arabidopsis thaliana]
gi|21387087|gb|AAM47947.1| proteasome subunit [Arabidopsis thaliana]
gi|110740894|dbj|BAE98543.1| 20S proteasome beta subunit PBC2 like protein [Arabidopsis
thaliana]
gi|332192025|gb|AEE30146.1| proteasome subunit beta type-3-A [Arabidopsis thaliana]
Length = 204
Score = 256 bits (654), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 121/129 (93%), Positives = 125/129 (96%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDR+FIGLSGLATD
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRVFIGLSGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKPETFASLVSA+LYEKRFGPY CQPVIAGL D+DKPFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYLCQPVIAGLGDDDKPFI 120
Query: 121 CTMDSIGAK 129
CTMDSIGAK
Sbjct: 121 CTMDSIGAK 129
>gi|351721818|ref|NP_001237990.1| uncharacterized protein LOC100499664 [Glycine max]
gi|255625639|gb|ACU13164.1| unknown [Glycine max]
Length = 204
Score = 255 bits (652), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 121/129 (93%), Positives = 125/129 (96%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHD+LFI LSGLATD+
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIALSGLATDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL DEDKPFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDEDKPFI 120
Query: 121 CTMDSIGAK 129
CTMD +GAK
Sbjct: 121 CTMDCLGAK 129
>gi|449464176|ref|XP_004149805.1| PREDICTED: proteasome subunit beta type-3-A-like [Cucumis sativus]
Length = 204
Score = 254 bits (650), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 119/129 (92%), Positives = 126/129 (97%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDFQ+I +IHD+LF+GLSGL TD+
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKPETFASLVSA+LYEKRFGPYFCQPVIAGLSDEDKPFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYFCQPVIAGLSDEDKPFI 120
Query: 121 CTMDSIGAK 129
CTMDSIGAK
Sbjct: 121 CTMDSIGAK 129
>gi|217075224|gb|ACJ85972.1| unknown [Medicago truncatula]
Length = 204
Score = 254 bits (650), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 129/178 (72%), Positives = 144/178 (80%), Gaps = 6/178 (3%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHD+LFIGLSGLATDS
Sbjct: 1 MSIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIGLSGLATDS 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREE DMKPETFASLVS++ YEKRFGPYFCQPVIAGL D+DKPFI
Sbjct: 61 QTLYQRLVFRHKLYQLREECDMKPETFASLVSSMQYEKRFGPYFCQPVIAGLGDDDKPFI 120
Query: 121 CTMDSIGAKYVGSLQKILLLLELLESLFMVPVRQCSSLIWNPMSCLKLYLKLCYHLLT 178
CTMD+IGAK + + ++ ESL+ C S+ M +L+ + LL+
Sbjct: 121 CTMDAIGAKELA--KDFVVAGTASESLYGA----CESMFKPDMEAEELFETISQALLS 172
>gi|297845150|ref|XP_002890456.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|5263324|gb|AAD41426.1|AC007727_15 Identical to gb|Y13173 Arabidopsis thaliana mRNA for proteasome
subunit. EST gb|T76747 comes from this gene [Arabidopsis
thaliana]
gi|12744997|gb|AAK06878.1|AF344327_1 putative 20S proteasome beta subunit PBC2 [Arabidopsis thaliana]
gi|297336298|gb|EFH66715.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 204
Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 120/129 (93%), Positives = 124/129 (96%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
M I EYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDR+FIGLSGLATD
Sbjct: 1 MQIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRVFIGLSGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKPETFASLVSA+LYEKRFGPY CQPVIAGL D+DKPFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYLCQPVIAGLGDDDKPFI 120
Query: 121 CTMDSIGAK 129
CTMDSIGAK
Sbjct: 121 CTMDSIGAK 129
>gi|225459609|ref|XP_002285871.1| PREDICTED: proteasome subunit beta type-3-A isoform 1 [Vitis
vinifera]
gi|302141789|emb|CBI18992.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 254 bits (648), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 118/129 (91%), Positives = 125/129 (96%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSAL+AMVGKNCFAIASDRR GVQLQT+ATDFQ+I +IHDR+F+GLSGLATD+
Sbjct: 1 MSIFEYNGSALIAMVGKNCFAIASDRRFGVQLQTVATDFQKIYRIHDRVFLGLSGLATDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL DEDKPFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDEDKPFI 120
Query: 121 CTMDSIGAK 129
CTMDSIGAK
Sbjct: 121 CTMDSIGAK 129
>gi|388491852|gb|AFK33992.1| unknown [Lotus japonicus]
Length = 204
Score = 253 bits (645), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 119/129 (92%), Positives = 124/129 (96%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQT+ATDFQRI K+HD+LFI LSGLATD+
Sbjct: 1 MSIFEYNGSAIVAMVGKNCFAIASDRRLGVQLQTVATDFQRIFKVHDKLFIALSGLATDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL DEDKPFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDEDKPFI 120
Query: 121 CTMDSIGAK 129
CTMD IGAK
Sbjct: 121 CTMDCIGAK 129
>gi|21553663|gb|AAM62756.1| putative 20S proteasome beta subunit PBC2 [Arabidopsis thaliana]
Length = 204
Score = 252 bits (644), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 120/129 (93%), Positives = 124/129 (96%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYN SA+VAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDR+FIGLSGLATD
Sbjct: 1 MSIFEYNVSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRVFIGLSGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKPETFASLVSA+LYEKRFGPY CQPVIAGL D+DKPFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYLCQPVIAGLGDDDKPFI 120
Query: 121 CTMDSIGAK 129
CTMDSIGAK
Sbjct: 121 CTMDSIGAK 129
>gi|18411547|ref|NP_565156.1| proteasome subunit beta type-3-B [Arabidopsis thaliana]
gi|79321410|ref|NP_001031294.1| proteasome subunit beta type-3-B [Arabidopsis thaliana]
gi|17380184|sp|O81153.1|PSB3B_ARATH RecName: Full=Proteasome subunit beta type-3-B; AltName: Full=20S
proteasome beta subunit C-2
gi|14326552|gb|AAK60320.1|AF385730_1 At1g77440/T5M16_3 [Arabidopsis thaliana]
gi|3421109|gb|AAC32069.1| 20S proteasome beta subunit PBC2 [Arabidopsis thaliana]
gi|19548049|gb|AAL87388.1| At1g77440/T5M16_3 [Arabidopsis thaliana]
gi|332197856|gb|AEE35977.1| proteasome subunit beta type-3-B [Arabidopsis thaliana]
gi|332197857|gb|AEE35978.1| proteasome subunit beta type-3-B [Arabidopsis thaliana]
Length = 204
Score = 252 bits (643), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 119/129 (92%), Positives = 124/129 (96%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHD LFIGLSGLATD
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKPETFASLVSA+LYEKRFGP+ CQPVIAGL D++KPFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFI 120
Query: 121 CTMDSIGAK 129
CTMDSIGAK
Sbjct: 121 CTMDSIGAK 129
>gi|297839603|ref|XP_002887683.1| hypothetical protein ARALYDRAFT_895633 [Arabidopsis lyrata subsp.
lyrata]
gi|297333524|gb|EFH63942.1| hypothetical protein ARALYDRAFT_895633 [Arabidopsis lyrata subsp.
lyrata]
Length = 204
Score = 252 bits (643), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 119/129 (92%), Positives = 124/129 (96%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHD LFIGLSGLATD
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKPETFASLVSA+LYEKRFGP+ CQPVIAGL D++KPFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFI 120
Query: 121 CTMDSIGAK 129
CTMDSIGAK
Sbjct: 121 CTMDSIGAK 129
>gi|242096488|ref|XP_002438734.1| hypothetical protein SORBIDRAFT_10g025190 [Sorghum bicolor]
gi|241916957|gb|EER90101.1| hypothetical protein SORBIDRAFT_10g025190 [Sorghum bicolor]
Length = 204
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 118/129 (91%), Positives = 124/129 (96%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDFQR+ KIHD+L+IGLSGLATD+
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRVFKIHDKLYIGLSGLATDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL D+D PFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDDDVPFI 120
Query: 121 CTMDSIGAK 129
CTMD IGAK
Sbjct: 121 CTMDCIGAK 129
>gi|14594927|emb|CAC43324.1| putative beta 3 proteasome subunit [Nicotiana tabacum]
Length = 178
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 119/129 (92%), Positives = 123/129 (95%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRI +IHD++FIGLSGL TD
Sbjct: 1 MSIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRIFRIHDKVFIGLSGLGTDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL D+DKPFI
Sbjct: 61 LTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDDDKPFI 120
Query: 121 CTMDSIGAK 129
CTMDSIGAK
Sbjct: 121 CTMDSIGAK 129
>gi|357475641|ref|XP_003608106.1| Proteasome subunit beta type [Medicago truncatula]
gi|355509161|gb|AES90303.1| Proteasome subunit beta type [Medicago truncatula]
gi|388497742|gb|AFK36937.1| unknown [Medicago truncatula]
Length = 204
Score = 249 bits (637), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 125/178 (70%), Positives = 144/178 (80%), Gaps = 6/178 (3%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
M+I ++NGSA+VAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHD+L+IGLSGLATDS
Sbjct: 1 MTIFKHNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLYIGLSGLATDS 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREE DMKPETFASLVSA+ YEKRFGPYFCQPVIAGL D+DKPFI
Sbjct: 61 QTLYQRLVFRHKLYQLREELDMKPETFASLVSAMQYEKRFGPYFCQPVIAGLGDDDKPFI 120
Query: 121 CTMDSIGAKYVGSLQKILLLLELLESLFMVPVRQCSSLIWNPMSCLKLYLKLCYHLLT 178
CTMD+IGAK + + ++ ESL+ C S+ M +L+ + LL+
Sbjct: 121 CTMDAIGAKELA--KDFVVAGTASESLYGA----CESMFKPDMEAEELFETISQALLS 172
>gi|242064246|ref|XP_002453412.1| hypothetical protein SORBIDRAFT_04g005590 [Sorghum bicolor]
gi|241933243|gb|EES06388.1| hypothetical protein SORBIDRAFT_04g005590 [Sorghum bicolor]
Length = 204
Score = 249 bits (636), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 117/129 (90%), Positives = 124/129 (96%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDFQR+ KIHD+L+IGLSGLATD+
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRVFKIHDKLYIGLSGLATDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL D ++PFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDNNEPFI 120
Query: 121 CTMDSIGAK 129
CTMD IGAK
Sbjct: 121 CTMDCIGAK 129
>gi|224084924|ref|XP_002307450.1| predicted protein [Populus trichocarpa]
gi|222856899|gb|EEE94446.1| predicted protein [Populus trichocarpa]
Length = 204
Score = 248 bits (634), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 115/129 (89%), Positives = 123/129 (95%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGV LQT+ATDFQRI KIHD++F+GLSGL TD+
Sbjct: 1 MSIFEYNGSAIVAMVGKNCFAIASDRRLGVNLQTVATDFQRIYKIHDKVFVGLSGLGTDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKPETFASLVSA+LYEKRFGPYFCQPVIAGL D+DKPFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYFCQPVIAGLGDDDKPFI 120
Query: 121 CTMDSIGAK 129
CTMD IGAK
Sbjct: 121 CTMDFIGAK 129
>gi|17380183|sp|O65084.1|PSB3_PICMA RecName: Full=Proteasome subunit beta type-3; AltName: Full=20S
proteasome alpha subunit C; AltName: Full=20S proteasome
subunit beta-3
gi|2982322|gb|AAC32146.1| probable proteasome subunit [Picea mariana]
gi|116784298|gb|ABK23292.1| unknown [Picea sitchensis]
Length = 204
Score = 248 bits (633), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 125/178 (70%), Positives = 142/178 (79%), Gaps = 6/178 (3%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRI KIHD+L++GLSGLATD
Sbjct: 1 MSIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRIFKIHDKLYVGLSGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQR FRHKLYQLREER+M+PETFASLVSALLYEKRFGPYFCQPVIAGL ++DKPFI
Sbjct: 61 QTLYQRFAFRHKLYQLREERNMRPETFASLVSALLYEKRFGPYFCQPVIAGLGEDDKPFI 120
Query: 121 CTMDSIGAKYVGSLQKILLLLELLESLFMVPVRQCSSLIWNPMSCLKLYLKLCYHLLT 178
CTMDSIGAK + + ++ ESL+ C S+ M +L+ + LL+
Sbjct: 121 CTMDSIGAKELA--KDFVVAGTAAESLYGA----CESMYKPDMEPEELFETISQALLS 172
>gi|413935900|gb|AFW70451.1| proteasome subunit beta type [Zea mays]
Length = 305
Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 115/129 (89%), Positives = 123/129 (95%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDF+R+ K+HD+L+IGLSGLATD+
Sbjct: 102 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFRRVFKVHDKLYIGLSGLATDA 161
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQL EERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL D D+PFI
Sbjct: 162 QTLYQRLVFRHKLYQLMEERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDNDEPFI 221
Query: 121 CTMDSIGAK 129
CTMD IGAK
Sbjct: 222 CTMDCIGAK 230
>gi|224063046|ref|XP_002300970.1| predicted protein [Populus trichocarpa]
gi|118487526|gb|ABK95590.1| unknown [Populus trichocarpa]
gi|222842696|gb|EEE80243.1| predicted protein [Populus trichocarpa]
Length = 204
Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 114/129 (88%), Positives = 123/129 (95%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGV LQT+ATDFQRI KIHD+LF+GLSGL TD+
Sbjct: 1 MSIFEYNGSAIVAMVGKNCFAIASDRRLGVNLQTVATDFQRIYKIHDKLFVGLSGLGTDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHK+YQLREERDMKPETFA+LVSA+LYEKRFGPYFCQPVIAGL D+DKPFI
Sbjct: 61 QTLYQRLVFRHKMYQLREERDMKPETFANLVSAVLYEKRFGPYFCQPVIAGLDDDDKPFI 120
Query: 121 CTMDSIGAK 129
CTMD IGAK
Sbjct: 121 CTMDFIGAK 129
>gi|49388033|dbj|BAD25149.1| Proteasome subunit beta type 3 [Oryza sativa Japonica Group]
gi|215768995|dbj|BAH01224.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 204
Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 115/129 (89%), Positives = 123/129 (95%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQT+ATDFQR+ KIHD+L+IGLSGLATD+
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKP+ FASLVSALLYEKRFGPYFCQPVIAGL D D+PFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPQAFASLVSALLYEKRFGPYFCQPVIAGLGDNDEPFI 120
Query: 121 CTMDSIGAK 129
CTMD IGAK
Sbjct: 121 CTMDCIGAK 129
>gi|413943569|gb|AFW76218.1| hypothetical protein ZEAMMB73_756098 [Zea mays]
Length = 204
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 116/129 (89%), Positives = 124/129 (96%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDFQR+ KIHD+L+IGLSGLATD+
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRVFKIHDKLYIGLSGLATDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL D++ PFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDDNVPFI 120
Query: 121 CTMDSIGAK 129
CTMD +GAK
Sbjct: 121 CTMDCLGAK 129
>gi|413954658|gb|AFW87307.1| proteasome subunit beta type [Zea mays]
Length = 204
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 115/129 (89%), Positives = 124/129 (96%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDFQR+ K+HD+L+IGLSGLATD+
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRVFKVHDKLYIGLSGLATDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL D++ PFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDDNVPFI 120
Query: 121 CTMDSIGAK 129
CTMD +GAK
Sbjct: 121 CTMDCLGAK 129
>gi|226505280|ref|NP_001141963.1| uncharacterized protein LOC100274112 [Zea mays]
gi|194706600|gb|ACF87384.1| unknown [Zea mays]
Length = 204
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 115/129 (89%), Positives = 124/129 (96%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDFQR+ K+HD+L+IGLSGLATD+
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRVFKVHDKLYIGLSGLATDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL D++ PFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDDNVPFI 120
Query: 121 CTMDSIGAK 129
CTMD +GAK
Sbjct: 121 CTMDCLGAK 129
>gi|357138383|ref|XP_003570772.1| PREDICTED: proteasome subunit beta type-3-like [Brachypodium
distachyon]
Length = 204
Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 113/129 (87%), Positives = 124/129 (96%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQT+ATDFQR+ K+H++L+IGLSGLATD+
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKVHEKLYIGLSGLATDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVF+HKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQP+IAGL D D+PFI
Sbjct: 61 QTLYQRLVFKHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPIIAGLGDNDQPFI 120
Query: 121 CTMDSIGAK 129
CTMD IGAK
Sbjct: 121 CTMDCIGAK 129
>gi|226504734|ref|NP_001140276.1| uncharacterized protein LOC100272320 [Zea mays]
gi|194698808|gb|ACF83488.1| unknown [Zea mays]
Length = 204
Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 115/129 (89%), Positives = 123/129 (95%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDF+R+ K+HD+L+IGLSGLATD+
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFRRVFKVHDKLYIGLSGLATDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQL EERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL D D+PFI
Sbjct: 61 QTLYQRLVFRHKLYQLMEERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDNDEPFI 120
Query: 121 CTMDSIGAK 129
CTMD IGAK
Sbjct: 121 CTMDCIGAK 129
>gi|115469154|ref|NP_001058176.1| Os06g0643100 [Oryza sativa Japonica Group]
gi|17380214|sp|Q9LST7.1|PSB3_ORYSJ RecName: Full=Proteasome subunit beta type-3; AltName: Full=20S
proteasome alpha subunit C; AltName: Full=20S proteasome
subunit beta-3
gi|8671506|dbj|BAA96836.1| beta 3 subunit of 20S proteasome [Oryza sativa Japonica Group]
gi|51535468|dbj|BAD37365.1| 20S proteasome subunit beta type 3 [Oryza sativa Japonica Group]
gi|113596216|dbj|BAF20090.1| Os06g0643100 [Oryza sativa Japonica Group]
gi|218198634|gb|EEC81061.1| hypothetical protein OsI_23870 [Oryza sativa Indica Group]
gi|222635966|gb|EEE66098.1| hypothetical protein OsJ_22127 [Oryza sativa Japonica Group]
Length = 204
Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 114/129 (88%), Positives = 125/129 (96%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQT+ATDFQR+ KIHD+L+IGLSGLATD+
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKP+TFASLVSALLYEKRFGPYFCQPVIAGL ++++PFI
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPQTFASLVSALLYEKRFGPYFCQPVIAGLGEDNEPFI 120
Query: 121 CTMDSIGAK 129
CTMD IGAK
Sbjct: 121 CTMDCIGAK 129
>gi|356515898|ref|XP_003526634.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta
type-3-A-like [Glycine max]
Length = 204
Score = 245 bits (626), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 115/129 (89%), Positives = 122/129 (94%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSALVAMVGKNCFAIASDRRLGVQ QT ATDFQRISKIHD+LFIGL GLATD+
Sbjct: 1 MSIFEYNGSALVAMVGKNCFAIASDRRLGVQPQTTATDFQRISKIHDKLFIGLXGLATDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRL+F HKLYQLREERDMKP+TFASLVSA+LYE RFGPYFCQPVIAGL D+DKPFI
Sbjct: 61 QTLYQRLLFGHKLYQLREERDMKPQTFASLVSAILYENRFGPYFCQPVIAGLGDDDKPFI 120
Query: 121 CTMDSIGAK 129
CTMD+IGAK
Sbjct: 121 CTMDAIGAK 129
>gi|125538349|gb|EAY84744.1| hypothetical protein OsI_06114 [Oryza sativa Indica Group]
gi|125581051|gb|EAZ21982.1| hypothetical protein OsJ_05637 [Oryza sativa Japonica Group]
Length = 213
Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 113/129 (87%), Positives = 122/129 (94%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
+ I EYNGSA+VAMVGKNCFAIASDRRLGVQLQT+ATDFQR+ KIHD+L+IGLSGLATD+
Sbjct: 10 LQIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDA 69
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVFRHKLYQLREERDMKP+ FASLVSALLYEKRFGPYFCQPVIAGL D D+PFI
Sbjct: 70 QTLYQRLVFRHKLYQLREERDMKPQAFASLVSALLYEKRFGPYFCQPVIAGLGDNDEPFI 129
Query: 121 CTMDSIGAK 129
CTMD IGAK
Sbjct: 130 CTMDCIGAK 138
>gi|326488821|dbj|BAJ98022.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326512002|dbj|BAJ95982.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 204
Score = 243 bits (619), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 112/129 (86%), Positives = 123/129 (95%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQT+ATDFQR+ KIH +L+IGLSGLA+D+
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHGKLYIGLSGLASDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVF+HKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQP+IAGL + D+PFI
Sbjct: 61 QTLYQRLVFKHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPIIAGLGENDQPFI 120
Query: 121 CTMDSIGAK 129
CTMD IGAK
Sbjct: 121 CTMDCIGAK 129
>gi|357123202|ref|XP_003563301.1| PREDICTED: proteasome subunit beta type-3-like [Brachypodium
distachyon]
Length = 204
Score = 242 bits (617), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 111/129 (86%), Positives = 124/129 (96%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQT+ATDFQR+ KIH +L++GLSGLATD+
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHGKLYLGLSGLATDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVF+HKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQP+IAGL ++++PFI
Sbjct: 61 QTLYQRLVFKHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPIIAGLGEDNEPFI 120
Query: 121 CTMDSIGAK 129
CTMD IGAK
Sbjct: 121 CTMDCIGAK 129
>gi|326509597|dbj|BAJ87014.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 204
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 110/129 (85%), Positives = 123/129 (95%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQT+ATDFQR+ KIH +L+IGLSGLA+D+
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHGKLYIGLSGLASDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRLVF+HKLYQLREERDMKPETFASLVS++LYEKRFGPYFCQP+IAGL +D+PFI
Sbjct: 61 QTLYQRLVFKHKLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFI 120
Query: 121 CTMDSIGAK 129
CTMD IGAK
Sbjct: 121 CTMDCIGAK 129
>gi|346469773|gb|AEO34731.1| hypothetical protein [Amblyomma maculatum]
Length = 204
Score = 238 bits (608), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 111/129 (86%), Positives = 122/129 (94%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGV LQTIATDF+RI +IHD+L++GLSGLATD+
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVNLQTIATDFKRIFRIHDKLYVGLSGLATDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
TLYQRLVFRHKLYQLREERDMKPETFAS+VSA+LYEKRFGPYFCQPVIAGL ++D PFI
Sbjct: 61 LTLYQRLVFRHKLYQLREERDMKPETFASVVSAILYEKRFGPYFCQPVIAGLGEDDVPFI 120
Query: 121 CTMDSIGAK 129
CTMD IGAK
Sbjct: 121 CTMDCIGAK 129
>gi|12323391|gb|AAG51672.1|AC010704_16 putative 20S proteasome beta subunit PBC2; 7006-8626 [Arabidopsis
thaliana]
Length = 191
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/116 (93%), Positives = 112/116 (96%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHD LFIGLSGLATD QTLYQRLVFRHKL
Sbjct: 1 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDVQTLYQRLVFRHKL 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAK 129
YQLREERDMKPETFASLVSA+LYEKRFGP+ CQPVIAGL D++KPFICTMDSIGAK
Sbjct: 61 YQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFICTMDSIGAK 116
>gi|168036644|ref|XP_001770816.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677875|gb|EDQ64340.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 204
Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 106/129 (82%), Positives = 118/129 (91%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSIT YNGSAL+AMVGKNCFAIASDRRLGV QTIA DFQRI KIHD+L+IGLSGLATD
Sbjct: 1 MSITSYNGSALIAMVGKNCFAIASDRRLGVNFQTIACDFQRIFKIHDKLYIGLSGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QT++QRL FRHKLYQLREER+M+PETFASLVSA+LYEKRFGPYFC+P+IAGL+D+ PFI
Sbjct: 61 QTMHQRLQFRHKLYQLREERNMRPETFASLVSAILYEKRFGPYFCEPIIAGLNDDGTPFI 120
Query: 121 CTMDSIGAK 129
CT D IGAK
Sbjct: 121 CTTDLIGAK 129
>gi|168037918|ref|XP_001771449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677176|gb|EDQ63649.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 204
Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/129 (81%), Positives = 117/129 (90%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSIT YNGSAL+AMVGK+CFAIASDRRLGV QTIA DFQRI KIHD L+IGLSGLATD
Sbjct: 1 MSITSYNGSALIAMVGKDCFAIASDRRLGVNFQTIACDFQRIFKIHDHLYIGLSGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QT++QRL FRHKLYQLREER+M+PETFASLVSA+LYEKRFGPYFC+P+IAGL+D+ PFI
Sbjct: 61 QTMHQRLNFRHKLYQLREERNMRPETFASLVSAMLYEKRFGPYFCEPIIAGLNDDGTPFI 120
Query: 121 CTMDSIGAK 129
CT D IGAK
Sbjct: 121 CTTDLIGAK 129
>gi|330318776|gb|AEC11048.1| 20S proteasome beta subunit pbc2 [Camellia sinensis]
Length = 187
Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 112/161 (69%), Positives = 128/161 (79%), Gaps = 6/161 (3%)
Query: 18 NCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLR 77
NCFAIASDRRLGVQLQTIATDFQRI KIHD+L IGL+GLATDSQT+YQRLVFRHKLYQLR
Sbjct: 1 NCFAIASDRRLGVQLQTIATDFQRIYKIHDKLSIGLAGLATDSQTMYQRLVFRHKLYQLR 60
Query: 78 EERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKYVGSLQKI 137
EERDMKP+TFASLVSALLYEKRFGPYFCQPVIAGL D+DKPFICTMDSIGAK + +
Sbjct: 61 EERDMKPQTFASLVSALLYEKRFGPYFCQPVIAGLGDDDKPFICTMDSIGAKELA--KDF 118
Query: 138 LLLLELLESLFMVPVRQCSSLIWNPMSCLKLYLKLCYHLLT 178
++ ESL+ C ++ M +L+ + LL+
Sbjct: 119 VVAGTASESLYGA----CEAMFKPDMEAEELFETISQALLS 155
>gi|302764110|ref|XP_002965476.1| hypothetical protein SELMODRAFT_266913 [Selaginella moellendorffii]
gi|302823097|ref|XP_002993203.1| hypothetical protein SELMODRAFT_272317 [Selaginella moellendorffii]
gi|300138973|gb|EFJ05723.1| hypothetical protein SELMODRAFT_272317 [Selaginella moellendorffii]
gi|300166290|gb|EFJ32896.1| hypothetical protein SELMODRAFT_266913 [Selaginella moellendorffii]
Length = 204
Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 99/128 (77%), Positives = 115/128 (89%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNGSALVAMVGK+CFAIASDRRLGV QTIATDFQRI KIHD+L++GL+GLA+D
Sbjct: 1 MSIFTYNGSALVAMVGKDCFAIASDRRLGVNFQTIATDFQRIFKIHDKLYVGLAGLASDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQRL +RH L+QL+EERDM+PETF++ VSA LYEKRFGPYF QP+IAGL ++KP+I
Sbjct: 61 QTLYQRLKYRHNLFQLQEERDMRPETFSNFVSATLYEKRFGPYFVQPLIAGLGADNKPYI 120
Query: 121 CTMDSIGA 128
CTMDSIGA
Sbjct: 121 CTMDSIGA 128
>gi|307109788|gb|EFN58025.1| hypothetical protein CHLNCDRAFT_48590 [Chlorella variabilis]
Length = 204
Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 95/162 (58%), Positives = 119/162 (73%), Gaps = 7/162 (4%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAM GK C AI SD R GVQLQT+ATD++++ KIHD+LFIGL+GL TD+
Sbjct: 1 MSIFEYNGSAIVAMAGKECVAIGSDLRFGVQLQTLATDYKKVYKIHDQLFIGLAGLGTDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
+TL QR F+H LY+LREERD+KP F LVSA LYE+RFGPYFCQPVIAGL + P++
Sbjct: 61 ETLSQRFAFKHNLYKLREERDIKPSAFGQLVSATLYERRFGPYFCQPVIAGLEPDGSPYL 120
Query: 121 CTMDSIGAKYVGSLQKILLLLELLESLFMVPVRQCSSLIWNP 162
C MDSIGA+ + + ++ +SL + C SL W P
Sbjct: 121 CGMDSIGAQE--TAKDFMVAGTATDSLLGI----CESL-WRP 155
>gi|413943570|gb|AFW76219.1| hypothetical protein ZEAMMB73_756098 [Zea mays]
Length = 99
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/99 (92%), Positives = 97/99 (97%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDFQR+ KIHD+L+IGLSGLATD+
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRVFKIHDKLYIGLSGLATDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKR 99
QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKR
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKR 99
>gi|384248553|gb|EIE22037.1| N-terminal nucleophile aminohydrolase [Coccomyxa subellipsoidea
C-169]
Length = 205
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 86/129 (66%), Positives = 108/129 (83%), Gaps = 1/129 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG+A+VAM GK C AI SD R GVQ QT+ATD++++ KIHD+LFIGL+GL TD+
Sbjct: 1 MSIFEYNGAAIVAMAGKECVAIGSDLRFGVQFQTLATDYKKVYKIHDKLFIGLAGLGTDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPF 119
QT++Q+L FRH LY+LREER++KP TF LVS++LYEKRFGPYF PVIAGL D+ + P+
Sbjct: 61 QTMHQKLKFRHNLYKLREERNIKPSTFGELVSSMLYEKRFGPYFVSPVIAGLEDKTNVPY 120
Query: 120 ICTMDSIGA 128
IC MD+IGA
Sbjct: 121 ICGMDTIGA 129
>gi|225459611|ref|XP_002285872.1| PREDICTED: proteasome subunit beta type-3-A isoform 2 [Vitis
vinifera]
Length = 174
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 89/99 (89%), Positives = 96/99 (96%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSAL+AMVGKNCFAIASDRR GVQLQT+ATDFQ+I +IHDR+F+GLSGLATD+
Sbjct: 1 MSIFEYNGSALIAMVGKNCFAIASDRRFGVQLQTVATDFQKIYRIHDRVFLGLSGLATDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKR 99
QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKR
Sbjct: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKR 99
>gi|413935899|gb|AFW70450.1| hypothetical protein ZEAMMB73_290009 [Zea mays]
Length = 200
Score = 188 bits (478), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 89/99 (89%), Positives = 96/99 (96%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDF+R+ K+HD+L+IGLSGLATD+
Sbjct: 102 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFRRVFKVHDKLYIGLSGLATDA 161
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKR 99
QTLYQRLVFRHKLYQL EERDMKPETFASLVSALLYEKR
Sbjct: 162 QTLYQRLVFRHKLYQLMEERDMKPETFASLVSALLYEKR 200
>gi|397628563|gb|EJK68962.1| hypothetical protein THAOC_09830 [Thalassiosira oceanica]
Length = 204
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 83/129 (64%), Positives = 105/129 (81%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG+A++AM GK+C AIASD RLG+ QT+A DF+++ K++DRL +GL+GLATD
Sbjct: 1 MSILEYNGAAIIAMAGKDCVAIASDNRLGISYQTVAMDFKKVFKMNDRLMVGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTL Q L FR LY+LREER+M PE F +L+S +LYEKRFGPYFC+PVIAGL + KPF+
Sbjct: 61 QTLDQLLRFRMNLYELREEREMTPEVFTNLMSNMLYEKRFGPYFCEPVIAGLDPKGKPFL 120
Query: 121 CTMDSIGAK 129
TMD IGA+
Sbjct: 121 GTMDLIGAQ 129
>gi|159476310|ref|XP_001696254.1| hypothetical protein CHLREDRAFT_187099 [Chlamydomonas reinhardtii]
gi|158282479|gb|EDP08231.1| predicted protein [Chlamydomonas reinhardtii]
Length = 204
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/162 (53%), Positives = 114/162 (70%), Gaps = 7/162 (4%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG+A+VAM GK C AI SD R GVQLQT+ D ++ KIHD+L++GLSGL TD+
Sbjct: 1 MSIFSYNGAAIVAMAGKECVAIGSDLRFGVQLQTMTCDTPKVYKIHDKLYLGLSGLQTDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
TL+Q+L FRH LY+LREERDMKP TF ++S LYE+RFGPYF PV+AGL + P++
Sbjct: 61 TTLHQKLQFRHNLYKLREERDMKPSTFGHMLSNALYERRFGPYFAAPVVAGLEPDGTPYL 120
Query: 121 CTMDSIGAKYVGSLQKILLLLELLESLFMVPVRQCSSLIWNP 162
C MD+IGA + S + ++ ESL+ + C S+ W P
Sbjct: 121 CGMDTIGA--IESAKDFMITGTSPESLYGM----CESM-WRP 155
>gi|290993280|ref|XP_002679261.1| predicted protein [Naegleria gruberi]
gi|284092877|gb|EFC46517.1| predicted protein [Naegleria gruberi]
Length = 205
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 82/129 (63%), Positives = 104/129 (80%), Gaps = 1/129 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG+ +VAM GKNC AIA+D R G++ QT+ TD Q+I KIHD+LFIGL+GLATD
Sbjct: 1 MSILEYNGAGIVAMTGKNCVAIAADTRYGIRQQTVGTDMQKIFKIHDKLFIGLNGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPF 119
QT+ ++L FR +Y L+EERD+KP +FA+L+S +LYEKRFGP+F +PVIAGL E+KPF
Sbjct: 61 QTVNEKLKFRMNMYNLKEERDIKPSSFANLMSNILYEKRFGPWFIEPVIAGLEGPENKPF 120
Query: 120 ICTMDSIGA 128
IC D IGA
Sbjct: 121 ICAQDLIGA 129
>gi|302829446|ref|XP_002946290.1| hypothetical protein VOLCADRAFT_78969 [Volvox carteri f.
nagariensis]
gi|300269105|gb|EFJ53285.1| hypothetical protein VOLCADRAFT_78969 [Volvox carteri f.
nagariensis]
Length = 204
Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 87/162 (53%), Positives = 115/162 (70%), Gaps = 7/162 (4%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNGSA+VAM GK C AI SD R GVQ QTI+ D ++ KIHD+L++GLSGL TD+
Sbjct: 1 MSIFSYNGSAIVAMAGKECVAIGSDLRFGVQYQTISCDTPKVFKIHDKLYLGLSGLLTDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTL+Q+L+FRH LY+LREERDMKP TF ++S LYE+RFGPYF PV+AGL + P++
Sbjct: 61 QTLHQKLLFRHNLYKLREERDMKPSTFGHMLSNALYERRFGPYFAAPVVAGLEPDGTPYL 120
Query: 121 CTMDSIGAKYVGSLQKILLLLELLESLFMVPVRQCSSLIWNP 162
MD+IGA + + + ++ ESL+ + C S+ W P
Sbjct: 121 SGMDTIGA--IETAKDFMIGGTSPESLYGM----CESM-WRP 155
>gi|281209309|gb|EFA83482.1| p21-activated protein kinase [Polysphondylium pallidum PN500]
Length = 1404
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 77/128 (60%), Positives = 99/128 (77%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG A++ M GK+C AIA+D R G+Q T++T+ ++ +I D+ FIG+SGL TD+
Sbjct: 1 MSIMEYNGGAVIVMTGKDCVAIATDLRFGIQHTTVSTNNPKVYRISDKCFIGISGLVTDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLYQ+LVFRH LY+L+EERDM P+ +LVS +LYEKRFGPYF +PVI GL +KPFI
Sbjct: 61 QTLYQKLVFRHNLYKLKEERDMSPQVLTNLVSNMLYEKRFGPYFTEPVICGLDSNNKPFI 120
Query: 121 CTMDSIGA 128
MD IGA
Sbjct: 121 SGMDLIGA 128
>gi|328875472|gb|EGG23836.1| proteasome subunit beta type 3 [Dictyostelium fasciculatum]
Length = 201
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 75/123 (60%), Positives = 97/123 (78%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
YNG A++ M GKNC AIA+D R G+Q QT++ + ++ +I+D+ FIG+SGL TD+QTLYQ
Sbjct: 3 YNGGAVIVMTGKNCVAIATDLRFGIQHQTVSNNHPKVYRINDKCFIGISGLVTDAQTLYQ 62
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+LVFRH LY+LREERDM P+ ++LV +LYEKRFGPYF +PVI GL +DKPFI MD
Sbjct: 63 KLVFRHNLYKLREERDMTPQVLSNLVGNMLYEKRFGPYFTEPVICGLDTQDKPFISGMDL 122
Query: 126 IGA 128
IGA
Sbjct: 123 IGA 125
>gi|428162279|gb|EKX31444.1| proteasome subunit beta type 3 [Guillardia theta CCMP2712]
Length = 208
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 80/128 (62%), Positives = 99/128 (77%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSITEYNG ++ M GKNC AIA D+R G Q QT+ATD ++ K+HD+LFIGL+GLATD
Sbjct: 1 MSITEYNGGCVIGMAGKNCVAIACDKRYGAQYQTLATDKTKVYKMHDQLFIGLAGLATDQ 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QT Y+RL FR +Y LREER +KP +F +VS LLYEKRFGPYF +PVIAGL E+KP++
Sbjct: 61 QTFYERLKFRLAMYSLREERLIKPASFGKMVSTLLYEKRFGPYFIEPVIAGLDKENKPYL 120
Query: 121 CTMDSIGA 128
+ D IGA
Sbjct: 121 FSSDFIGA 128
>gi|224014869|ref|XP_002297096.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968215|gb|EED86564.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 204
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 75/128 (58%), Positives = 104/128 (81%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG+A++AM GK+C IASD R+G+ QT++ DF++I +++++LF+GL+GLA+D
Sbjct: 1 MSILEYNGAAIIAMSGKDCVGIASDNRMGISYQTVSMDFKKIFQMNEKLFVGLAGLASDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTL Q L FR LY+LREER+M P+ F +L+S +LYEKRFGPYF +PV+AGL + DKP++
Sbjct: 61 QTLDQLLRFRMNLYELREEREMTPKVFTNLLSNMLYEKRFGPYFAEPVVAGLDENDKPYL 120
Query: 121 CTMDSIGA 128
TMD IGA
Sbjct: 121 ATMDLIGA 128
>gi|66825821|ref|XP_646265.1| proteasome subunit beta type 3 [Dictyostelium discoideum AX4]
gi|74858609|sp|Q55D66.1|PSB3_DICDI RecName: Full=Proteasome subunit beta type-3
gi|60474299|gb|EAL72236.1| proteasome subunit beta type 3 [Dictyostelium discoideum AX4]
Length = 205
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 79/129 (61%), Positives = 99/129 (76%), Gaps = 1/129 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A + MVGKNC AIASD R G+Q QTI+ DF ++ +I+D+ F+G+SGL TD+
Sbjct: 1 MSIMAYNGGACIVMVGKNCVAIASDLRFGIQQQTISNDFPKVYRINDKCFVGISGLVTDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDK-PF 119
QTLYQ+LVFRH LY+LREERDM P ++L++ +LYEKRFGPYF +P+I GL D PF
Sbjct: 61 QTLYQKLVFRHNLYKLREERDMSPRVVSNLLTNMLYEKRFGPYFTEPLICGLEGPDNTPF 120
Query: 120 ICTMDSIGA 128
I MD IGA
Sbjct: 121 ISGMDLIGA 129
>gi|156389516|ref|XP_001635037.1| predicted protein [Nematostella vectensis]
gi|156222126|gb|EDO42974.1| predicted protein [Nematostella vectensis]
Length = 205
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 81/128 (63%), Positives = 105/128 (82%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG+A++AMVGKNC AIA+DRRLG+Q QT++ DFQ+I ++ ++LF+GL GLATD
Sbjct: 1 MSIMEYNGAAIIAMVGKNCVAIAADRRLGIQAQTVSCDFQKIFQMGEKLFVGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPF 119
QT+ RL FR LY+LRE R +KP+TF S+VS LLYE+RFGPYF +PVIAGL + ++PF
Sbjct: 61 QTISSRLKFRLNLYELREGRPIKPKTFLSMVSNLLYERRFGPYFVEPVIAGLDPKTNEPF 120
Query: 120 ICTMDSIG 127
I +MD IG
Sbjct: 121 ISSMDLIG 128
>gi|167522269|ref|XP_001745472.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775821|gb|EDQ89443.1| predicted protein [Monosiga brevicollis MX1]
Length = 211
Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 76/126 (60%), Positives = 100/126 (79%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
SI EYNGSA+VAM GK C AIA+DRRLG Q QT+ATDFQ++ ++ LF+GL GLATD Q
Sbjct: 9 SIMEYNGSAMVAMTGKGCIAIAADRRLGAQAQTVATDFQKLFQMGPTLFVGLPGLATDVQ 68
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
T QRL F+ KLY+LREERD++P+ +L+S++LYEKRFGPYF +P+IAGL + +P++
Sbjct: 69 TFSQRLTFKLKLYKLREERDIEPKALTNLISSMLYEKRFGPYFIEPLIAGLDKDGQPYVA 128
Query: 122 TMDSIG 127
+ D IG
Sbjct: 129 STDVIG 134
>gi|47028283|gb|AAT09074.1| proteasome beta subunit [Bigelowiella natans]
Length = 204
Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 80/128 (62%), Positives = 101/128 (78%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI +YNGSA+VAMVGK+C AIASD R G+Q QTIA D +++ ++ D+LFIGLSGL TD
Sbjct: 1 MSILQYNGSAIVAMVGKDCVAIASDMRYGIQQQTIACDMKKVFQMGDKLFIGLSGLLTDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTL Q+ F+ K+Y LRE R M+P+ F+SLVS+ LYEKRFGPYF +PV+AGL ++ PFI
Sbjct: 61 QTLKQKFDFKLKMYSLRENRPMRPKVFSSLVSSTLYEKRFGPYFVEPVVAGLDAKEGPFI 120
Query: 121 CTMDSIGA 128
MD IGA
Sbjct: 121 AAMDLIGA 128
>gi|255083731|ref|XP_002508440.1| predicted protein [Micromonas sp. RCC299]
gi|226523717|gb|ACO69698.1| predicted protein [Micromonas sp. RCC299]
Length = 207
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/161 (54%), Positives = 110/161 (68%), Gaps = 9/161 (5%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGV-QLQTIATDFQRISKIHDRLFIGLSGLATD 59
MSI YNG+A++AM GK C AIASD R G+ Q QT A D ++I KIHD L++GLSGLATD
Sbjct: 1 MSIMSYNGAAIIAMCGKECVAIASDLRFGINQQQTTAVDMKKIYKIHDHLYVGLSGLATD 60
Query: 60 SQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED--K 117
TL QR FRH +Y+LRE R M+PETFA+LVS +LYEKRFGPY+ +P++AGL + K
Sbjct: 61 QATLAQRFKFRHNMYELRESRKMRPETFANLVSTMLYEKRFGPYYAEPIVAGLDATNGYK 120
Query: 118 PFICTMDSIGAKYVGSLQKILLLLELLESLFMVPVRQCSSL 158
PFI MD IGA + ++ ESLF V C S+
Sbjct: 121 PFITGMDLIGA--MAPTDNFVVCGNNEESLFGV----CESM 155
>gi|298711226|emb|CBJ32446.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 204
Score = 169 bits (429), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 77/131 (58%), Positives = 102/131 (77%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG+A++AM GKNC I SD RLG Q QT+ATDF++I K+ D+L +GL GLATD
Sbjct: 1 MSILEYNGAAILAMTGKNCVGICSDSRLGNQAQTVATDFEKIFKMGDKLMVGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
T+ + L FR LY+LREER++KPETF++L+S +LY+KRFGPYF +P++AGL +++ PFI
Sbjct: 61 ITMKELLTFRLNLYRLREEREIKPETFSALMSHILYQKRFGPYFVEPIVAGLKEDNTPFI 120
Query: 121 CTMDSIGAKYV 131
D IGA V
Sbjct: 121 SAFDLIGAPVV 131
>gi|338710899|ref|XP_001501618.2| PREDICTED: proteasome subunit beta type-3-like [Equus caballus]
Length = 205
Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 101/132 (76%), Gaps = 1/132 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+T S+V+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPQTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKYV 131
IC++D IG V
Sbjct: 121 ICSLDLIGCPMV 132
>gi|330801313|ref|XP_003288673.1| proteasome subunit beta type 3 [Dictyostelium purpureum]
gi|325081295|gb|EGC34816.1| proteasome subunit beta type 3 [Dictyostelium purpureum]
Length = 205
Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 99/130 (76%), Gaps = 1/130 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A + M GKNC AIASD R G+Q QTI+ D+ ++ +++D+ FIG+SGL TD+
Sbjct: 1 MSIMAYNGGACIVMTGKNCVAIASDLRFGIQQQTISNDYPKVYRVNDKCFIGISGLVTDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDK-PF 119
QTL+Q++VFRH LY+LREERDM P+ +L++ +LYEKRFGPYF +P+I GL D P+
Sbjct: 61 QTLHQKIVFRHNLYKLREERDMSPKVVTNLIANMLYEKRFGPYFTEPLICGLEGPDNTPY 120
Query: 120 ICTMDSIGAK 129
I MD IGA+
Sbjct: 121 ISGMDLIGAQ 130
>gi|387017850|gb|AFJ51043.1| Proteasome subunit beta type-3-like [Crotalus adamanteus]
Length = 205
Score = 169 bits (428), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 80/128 (62%), Positives = 101/128 (78%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q +ATDFQ+I + DRLFIGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVATDFQKIFPMGDRLFIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+T S+VS LLYE+RFGPY+ +PVIAGL+ +PF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPQTLMSMVSNLLYERRFGPYYTEPVIAGLNPVTYEPF 120
Query: 120 ICTMDSIG 127
IC++D IG
Sbjct: 121 ICSLDLIG 128
>gi|326426453|gb|EGD72023.1| proteasome subunit beta type-3 [Salpingoeca sp. ATCC 50818]
Length = 204
Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 74/127 (58%), Positives = 101/127 (79%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA+VAM GK C AIA+DRRLG Q QT++TDFQ++ ++ +LF+GL GL TD+
Sbjct: 1 MSIMEYNGSAVVAMTGKECVAIAADRRLGAQAQTVSTDFQKVFQMGPKLFVGLPGLGTDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
T+ QRL FR +Y LREERD++P+T +LVS+ LYE+RFGPYF +PV+AGL +++P++
Sbjct: 61 ITVSQRLKFRLNMYTLREERDIEPKTMINLVSSFLYERRFGPYFVEPVVAGLDSKNQPYV 120
Query: 121 CTMDSIG 127
+ D IG
Sbjct: 121 ASTDLIG 127
>gi|328770084|gb|EGF80126.1| hypothetical protein BATDEDRAFT_88542 [Batrachochytrium
dendrobatidis JAM81]
Length = 204
Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 73/127 (57%), Positives = 98/127 (77%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNGSA++AM GKNC AIA+DRR GVQ T+ TDFQ+I I D+ ++GL+GLATD
Sbjct: 1 MSIMEYNGSAIIAMAGKNCVAIAADRRFGVQALTLGTDFQKIFPITDKTYLGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
TL R ++ +Y L EER++ P+TF+ +VS+ YEKRFGPYF +P++AGL ++ PFI
Sbjct: 61 TTLKDRFRYKVNMYHLEEEREISPKTFSHMVSSTQYEKRFGPYFVEPIVAGLEKDNTPFI 120
Query: 121 CTMDSIG 127
C+MD+IG
Sbjct: 121 CSMDTIG 127
>gi|308321183|gb|ADO27744.1| proteasome subunit beta type-3 [Ictalurus furcatus]
Length = 205
Score = 168 bits (426), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/128 (61%), Positives = 101/128 (78%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GK+C AIASDRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMRGKDCVAIASDRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ +PVIAGL + +PF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 120 ICTMDSIG 127
IC++D IG
Sbjct: 121 ICSLDQIG 128
>gi|410917408|ref|XP_003972178.1| PREDICTED: proteasome subunit beta type-3-like [Takifugu rubripes]
Length = 205
Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/128 (61%), Positives = 101/128 (78%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMRGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ +PVIAGL + +PF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 120 ICTMDSIG 127
IC++D IG
Sbjct: 121 ICSLDLIG 128
>gi|426348535|ref|XP_004041889.1| PREDICTED: proteasome subunit beta type-3 [Gorilla gorilla gorilla]
Length = 205
Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 100/132 (75%), Gaps = 1/132 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPHTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKYV 131
IC++D IG V
Sbjct: 121 ICSLDLIGCPMV 132
>gi|344285957|ref|XP_003414726.1| PREDICTED: proteasome subunit beta type-3-like [Loxodonta africana]
Length = 205
Score = 168 bits (425), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 81/132 (61%), Positives = 100/132 (75%), Gaps = 1/132 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIASDRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIASDRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKYV 131
IC++D IG V
Sbjct: 121 ICSLDLIGCPMV 132
>gi|291225400|ref|XP_002732675.1| PREDICTED: proteasome beta 3 subunit-like [Saccoglossus
kowalevskii]
Length = 205
Score = 168 bits (425), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 101/132 (76%), Gaps = 1/132 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNGSA+VAM GK+C AIA+DRR G+Q QT++ DFQ+I ++ RL++GL GLATD
Sbjct: 1 MSIMSYNGSAVVAMKGKDCVAIAADRRFGIQAQTVSMDFQKIFEMGPRLYLGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-DEDKPF 119
QT+ RL FR LY LRE R +KP+TF S+VS LLYE+RFGPYF +P+IAGL D +PF
Sbjct: 61 QTVSNRLKFRLNLYTLRENRKIKPKTFMSMVSNLLYERRFGPYFVEPIIAGLEPDTYEPF 120
Query: 120 ICTMDSIGAKYV 131
IC++D IG V
Sbjct: 121 ICSLDLIGCPMV 132
>gi|297701417|ref|XP_002827712.1| PREDICTED: proteasome subunit beta type-3 isoform 1 [Pongo abelii]
Length = 218
Score = 168 bits (425), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 81/132 (61%), Positives = 100/132 (75%), Gaps = 1/132 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP T SLV+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSLVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKYV 131
IC++D IG V
Sbjct: 121 ICSLDLIGCPMV 132
>gi|118102948|ref|XP_418119.2| PREDICTED: proteasome subunit beta type-3 [Gallus gallus]
Length = 205
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/128 (61%), Positives = 100/128 (78%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIASDRR G+Q Q + TDFQ+I + +RL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMRGKNCVAIASDRRFGIQAQMVTTDFQKIFPMGERLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPF 119
QT+ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ +PVIAGL +PF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPQTFMSMVSNLLYERRFGPYYTEPVIAGLDPITHEPF 120
Query: 120 ICTMDSIG 127
IC++D IG
Sbjct: 121 ICSLDLIG 128
>gi|62858119|ref|NP_001016503.1| proteasome beta 3 subunit [Xenopus (Silurana) tropicalis]
gi|163916422|gb|AAI57195.1| proteasome (prosome, macropain) subunit, beta type 3 [Xenopus
(Silurana) tropicalis]
Length = 205
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/128 (61%), Positives = 101/128 (78%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GK+C AIA+DRR GVQ Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAIMAMRGKDCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+TF S+V+ LLYE+RFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVANLLYERRFGPYYIEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIG 127
IC++D IG
Sbjct: 121 ICSLDLIG 128
>gi|432957515|ref|XP_004085833.1| PREDICTED: proteasome subunit beta type-3-like [Oryzias latipes]
Length = 205
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 102/132 (77%), Gaps = 1/132 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + +RL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMRGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGERLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ +PVIAGL + +PF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKSFEPF 120
Query: 120 ICTMDSIGAKYV 131
IC++D IG V
Sbjct: 121 ICSLDLIGCPMV 132
>gi|318102146|ref|NP_001188163.1| proteasome subunit beta type-3 [Ictalurus punctatus]
gi|308323613|gb|ADO28942.1| proteasome subunit beta type-3 [Ictalurus punctatus]
Length = 205
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/128 (61%), Positives = 101/128 (78%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GK+C AIASDRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMRGKDCVAIASDRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ +PVIAGL + +PF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 120 ICTMDSIG 127
IC++D IG
Sbjct: 121 ICSLDLIG 128
>gi|390346277|ref|XP_780413.3| PREDICTED: proteasome subunit beta type-3-like [Strongylocentrotus
purpuratus]
Length = 205
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/128 (63%), Positives = 98/128 (76%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNGSA+VAM+GK+C IASDRR GVQ QT++ + Q+I + RL++GLSGLATD
Sbjct: 1 MSIMSYNGSAVVAMIGKDCVGIASDRRFGVQAQTVSMNAQKIFTMGPRLYLGLSGLATDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
T+ RL FR LY LRE RD+KPETF S+VS LLYE+RFGPYF +PVIAGL + KPF
Sbjct: 61 TTVSNRLKFRLNLYTLRENRDVKPETFMSMVSNLLYERRFGPYFIEPVIAGLDPKTYKPF 120
Query: 120 ICTMDSIG 127
IC +D IG
Sbjct: 121 ICNLDLIG 128
>gi|225706352|gb|ACO09022.1| Proteasome subunit beta type 3 [Osmerus mordax]
Length = 205
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 101/132 (76%), Gaps = 1/132 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GK C A+A+DRR GVQ Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMRGKQCVAVAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+TF S+VS LLYEKRFGPY+ +PVIAGL + +PF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYEKRFGPYYIEPVIAGLDPKTFEPF 120
Query: 120 ICTMDSIGAKYV 131
IC++D IG V
Sbjct: 121 ICSLDLIGCPMV 132
>gi|54696308|gb|AAV38526.1| proteasome (prosome, macropain) subunit, beta type, 3 [synthetic
construct]
gi|60812279|gb|AAX36205.1| proteasome subunit beta type 3 [synthetic construct]
Length = 206
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 100/132 (75%), Gaps = 1/132 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKYV 131
IC++D IG V
Sbjct: 121 ICSLDLIGCPMV 132
>gi|197632283|gb|ACH70865.1| proteasome (prosome, macropain) subunit, beta type 3 [Salmo salar]
gi|209735862|gb|ACI68800.1| Proteasome subunit beta type-3 [Salmo salar]
Length = 205
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 101/132 (76%), Gaps = 1/132 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GK C AIA+DRR GVQ Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ +PVIAGL + +PF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 120 ICTMDSIGAKYV 131
IC++D IG V
Sbjct: 121 ICSLDLIGCPMV 132
>gi|185133100|ref|NP_001117722.1| proteasome subunit beta type-3 [Oncorhynchus mykiss]
gi|6093786|sp|O73817.1|PSB3_ONCMY RecName: Full=Proteasome subunit beta type-3; AltName:
Full=Proteasome chain 13; AltName: Full=Proteasome
component C10-II; AltName: Full=Proteasome theta chain
gi|3063687|gb|AAC14141.1| proteasome subunit C10-11 [Oncorhynchus mykiss]
gi|225705904|gb|ACO08798.1| Proteasome subunit beta type 3 [Oncorhynchus mykiss]
Length = 205
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 101/132 (76%), Gaps = 1/132 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GK C AIA+DRR GVQ Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ +PVIAGL + +PF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 120 ICTMDSIGAKYV 131
IC++D IG V
Sbjct: 121 ICSLDLIGCPMV 132
>gi|77736139|ref|NP_001029768.1| proteasome subunit beta type-3 [Bos taurus]
gi|426237857|ref|XP_004012874.1| PREDICTED: proteasome subunit beta type-3 [Ovis aries]
gi|108935878|sp|P33672.3|PSB3_BOVIN RecName: Full=Proteasome subunit beta type-3; AltName:
Full=Proteasome chain 13; AltName: Full=Proteasome
component C10-II; AltName: Full=Proteasome theta chain
gi|74354224|gb|AAI02555.1| Proteasome (prosome, macropain) subunit, beta type, 3 [Bos taurus]
gi|154426162|gb|AAI51436.1| Proteasome (prosome, macropain) subunit, beta type, 3 [Bos taurus]
gi|296476492|tpg|DAA18607.1| TPA: proteasome subunit beta type-3 [Bos taurus]
Length = 205
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 100/132 (75%), Gaps = 1/132 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKYV 131
IC++D IG V
Sbjct: 121 ICSLDLIGCPMV 132
>gi|383873358|ref|NP_001244746.1| proteasome subunit beta type-3 [Macaca mulatta]
gi|332258335|ref|XP_003278254.1| PREDICTED: proteasome subunit beta type-3 isoform 1 [Nomascus
leucogenys]
gi|402899980|ref|XP_003912961.1| PREDICTED: proteasome subunit beta type-3 [Papio anubis]
gi|403279415|ref|XP_003931246.1| PREDICTED: proteasome subunit beta type-3 [Saimiri boliviensis
boliviensis]
gi|355754088|gb|EHH58053.1| Proteasome subunit beta type-3 [Macaca fascicularis]
gi|380788351|gb|AFE66051.1| proteasome subunit beta type-3 [Macaca mulatta]
gi|383414525|gb|AFH30476.1| proteasome subunit beta type-3 [Macaca mulatta]
gi|384948330|gb|AFI37770.1| proteasome subunit beta type-3 [Macaca mulatta]
Length = 205
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 100/132 (75%), Gaps = 1/132 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKYV 131
IC++D IG V
Sbjct: 121 ICSLDLIGCPMV 132
>gi|209733400|gb|ACI67569.1| Proteasome subunit beta type-3 [Salmo salar]
Length = 205
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 101/132 (76%), Gaps = 1/132 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GK C AIA+DRR GVQ Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ +PVIAGL + +PF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 120 ICTMDSIGAKYV 131
IC++D IG V
Sbjct: 121 ICSLDLIGCPMV 132
>gi|356461018|ref|NP_001239086.1| proteasome subunit beta type-3 [Canis lupus familiaris]
gi|354474809|ref|XP_003499622.1| PREDICTED: proteasome subunit beta type-3-like [Cricetulus griseus]
Length = 205
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 100/132 (75%), Gaps = 1/132 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKYV 131
IC++D IG V
Sbjct: 121 ICSLDLIGCPMV 132
>gi|22538465|ref|NP_002786.2| proteasome subunit beta type-3 [Homo sapiens]
gi|397477037|ref|XP_003809892.1| PREDICTED: proteasome subunit beta type-3 [Pan paniscus]
gi|20532411|sp|P49720.2|PSB3_HUMAN RecName: Full=Proteasome subunit beta type-3; AltName:
Full=Proteasome chain 13; AltName: Full=Proteasome
component C10-II; AltName: Full=Proteasome theta chain
gi|15278174|gb|AAH13008.1| Proteasome (prosome, macropain) subunit, beta type, 3 [Homo
sapiens]
gi|119580935|gb|EAW60531.1| proteasome (prosome, macropain) subunit, beta type, 3 [Homo
sapiens]
gi|261860656|dbj|BAI46850.1| proteasome (prosome, macropain) subunit, beta type, 3 [synthetic
construct]
gi|410256642|gb|JAA16288.1| proteasome (prosome, macropain) subunit, beta type, 3 [Pan
troglodytes]
Length = 205
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 100/132 (75%), Gaps = 1/132 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKYV 131
IC++D IG V
Sbjct: 121 ICSLDLIGCPMV 132
>gi|410980899|ref|XP_003996811.1| PREDICTED: proteasome subunit beta type-3 [Felis catus]
Length = 205
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 100/132 (75%), Gaps = 1/132 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKYV 131
IC++D IG V
Sbjct: 121 ICSLDLIGCPMV 132
>gi|6755202|ref|NP_036101.1| proteasome subunit beta type-3 [Mus musculus]
gi|9910831|sp|Q9R1P1.1|PSB3_MOUSE RecName: Full=Proteasome subunit beta type-3; AltName:
Full=Proteasome chain 13; AltName: Full=Proteasome
component C10-II; AltName: Full=Proteasome theta chain
gi|378792311|pdb|3UNB|I Chain I, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792325|pdb|3UNB|W Chain W, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792339|pdb|3UNB|KK Chain k, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792353|pdb|3UNB|YY Chain y, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792367|pdb|3UNE|I Chain I, Mouse Constitutive 20s Proteasome
gi|378792381|pdb|3UNE|W Chain W, Mouse Constitutive 20s Proteasome
gi|378792395|pdb|3UNE|KK Chain k, Mouse Constitutive 20s Proteasome
gi|378792409|pdb|3UNE|YY Chain y, Mouse Constitutive 20s Proteasome
gi|378792423|pdb|3UNF|I Chain I, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792437|pdb|3UNF|W Chain W, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792451|pdb|3UNH|I Chain I, Mouse 20s Immunoproteasome
gi|378792465|pdb|3UNH|W Chain W, Mouse 20s Immunoproteasome
gi|5757661|gb|AAD50537.1|AF060092_1 proteasome subunit C10-II [Mus musculus]
gi|12832232|dbj|BAB22017.1| unnamed protein product [Mus musculus]
gi|12845973|dbj|BAB26979.1| unnamed protein product [Mus musculus]
gi|15928628|gb|AAH14783.1| Proteasome (prosome, macropain) subunit, beta type 3 [Mus musculus]
gi|68085773|gb|AAH98233.1| Proteasome (prosome, macropain) subunit, beta type 3 [Mus musculus]
gi|74139857|dbj|BAE31772.1| unnamed protein product [Mus musculus]
gi|148684145|gb|EDL16092.1| mCG13231, isoform CRA_b [Mus musculus]
gi|444713978|gb|ELW54866.1| Proteasome subunit beta type-3 [Tupaia chinensis]
Length = 205
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 100/132 (75%), Gaps = 1/132 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKYV 131
IC++D IG V
Sbjct: 121 ICSLDLIGCPMV 132
>gi|291405921|ref|XP_002719377.1| PREDICTED: proteasome beta 3 subunit [Oryctolagus cuniculus]
Length = 205
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 100/132 (75%), Gaps = 1/132 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTYKPF 120
Query: 120 ICTMDSIGAKYV 131
IC++D IG V
Sbjct: 121 ICSLDLIGCPMV 132
>gi|326934090|ref|XP_003213128.1| PREDICTED: proteasome subunit beta type-3-like [Meleagris
gallopavo]
Length = 205
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/128 (61%), Positives = 100/128 (78%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q I TDFQ+I + +RL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMRGKNCVAIAADRRFGIQAQMITTDFQKIFPMGERLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPF 119
QT+ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ +PVIAGL +PF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPQTFMSMVSNLLYERRFGPYYTEPVIAGLDPITHEPF 120
Query: 120 ICTMDSIG 127
IC++D IG
Sbjct: 121 ICSLDLIG 128
>gi|355714019|gb|AES04862.1| proteasome subunit beta type 3 [Mustela putorius furo]
Length = 180
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 100/132 (75%), Gaps = 1/132 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKYV 131
IC++D IG V
Sbjct: 121 ICSLDLIGCPMV 132
>gi|209737458|gb|ACI69598.1| Proteasome subunit beta type-3 [Salmo salar]
gi|303661230|gb|ADM16027.1| Proteasome subunit beta type-3 [Salmo salar]
Length = 205
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 101/132 (76%), Gaps = 1/132 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GK C AIA+DRR GVQ Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ +PVIAGL + +PF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 120 ICTMDSIGAKYV 131
IC++D IG V
Sbjct: 121 ICSLDLIGCPMV 132
>gi|21465651|pdb|1IRU|J Chain J, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
gi|21465665|pdb|1IRU|X Chain X, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
gi|565647|dbj|BAA05645.1| proteasome subunit HsC10-II [Homo sapiens]
gi|1091575|prf||2021261C proteasome:SUBUNIT=HsC10-II
Length = 205
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 100/132 (75%), Gaps = 1/132 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQLVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKYV 131
IC++D IG V
Sbjct: 121 ICSLDLIGCPMV 132
>gi|145341760|ref|XP_001415971.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576194|gb|ABO94263.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 206
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/151 (52%), Positives = 108/151 (71%), Gaps = 3/151 (1%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGV-QLQTIATDFQRISKIHDRLFIGLSGLATD 59
MSI YNG+A++AM GK+C AIASD RLG+ Q QT A D+ ++ KIHDRL++GL+GL D
Sbjct: 1 MSIMSYNGAAVIAMTGKDCVAIASDLRLGINQNQTAAVDYSKLHKIHDRLYLGLTGLIAD 60
Query: 60 SQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPF 119
TL Q+L F+H +Y+LRE R M P+ F ++VSA LYEKRF PY+ +PV+AGL + KP+
Sbjct: 61 QLTLAQKLKFKHDMYELRENRVMSPKVFGAVVSATLYEKRFSPYYTEPVVAGLDADGKPY 120
Query: 120 ICTMDSIGAKYVGSLQKILLLLELLESLFMV 150
I +MD IGA S ++ + +ESLF V
Sbjct: 121 ITSMDLIGAD--ASTDDFVVAGDNVESLFGV 149
>gi|8394082|ref|NP_058981.1| proteasome subunit beta type-3 [Rattus norvegicus]
gi|730380|sp|P40112.1|PSB3_RAT RecName: Full=Proteasome subunit beta type-3; AltName:
Full=Proteasome chain 13; AltName: Full=Proteasome
component C10-II; AltName: Full=Proteasome theta chain
gi|458731|dbj|BAA04824.1| proteasome subunit RC10-II [Rattus sp.]
gi|54261675|gb|AAH84723.1| Proteasome (prosome, macropain) subunit, beta type 3 [Rattus
norvegicus]
gi|149054057|gb|EDM05874.1| rCG33987, isoform CRA_a [Rattus norvegicus]
Length = 205
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 100/132 (75%), Gaps = 1/132 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MS+ YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSVMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKYV 131
IC++D IG V
Sbjct: 121 ICSLDLIGCPMV 132
>gi|56541012|gb|AAH87457.1| Unknown (protein for MGC:99279) [Xenopus laevis]
Length = 205
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/128 (60%), Positives = 101/128 (78%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GK+C AIA+DRR GVQ Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAIMAMKGKDCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+TF S+V+ LLYE+RFGPY+ +PVIAGL + +PF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVANLLYERRFGPYYIEPVIAGLDPKTFQPF 120
Query: 120 ICTMDSIG 127
IC++D IG
Sbjct: 121 ICSLDLIG 128
>gi|260809319|ref|XP_002599453.1| hypothetical protein BRAFLDRAFT_281217 [Branchiostoma floridae]
gi|229284732|gb|EEN55465.1| hypothetical protein BRAFLDRAFT_281217 [Branchiostoma floridae]
Length = 205
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 78/128 (60%), Positives = 101/128 (78%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG+A++AMVGK+C AIA+DRR GVQ QT++ DFQ+I ++ DRLF+GL GLATD
Sbjct: 1 MSIMSYNGAAIIAMVGKDCVAIAADRRFGVQAQTVSMDFQKIFQMGDRLFLGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ R+ FR LY+LRE R +KP+TF S+VS LLYE+RFGPYF +PV+AGL + +PF
Sbjct: 61 QTVSNRMKFRLNLYELREARQVKPKTFLSMVSNLLYERRFGPYFVEPVVAGLDPKTFEPF 120
Query: 120 ICTMDSIG 127
I + D IG
Sbjct: 121 IASCDLIG 128
>gi|395532536|ref|XP_003768326.1| PREDICTED: proteasome subunit beta type-3 [Sarcophilus harrisii]
Length = 205
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 100/132 (75%), Gaps = 1/132 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + +PF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPNTLMSMVANLLYEKRFGPYYTEPVIAGLHPKTFEPF 120
Query: 120 ICTMDSIGAKYV 131
IC++D IG V
Sbjct: 121 ICSLDLIGCPMV 132
>gi|37779068|gb|AAP20194.1| proteasome subunit [Pagrus major]
Length = 140
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 77/132 (58%), Positives = 102/132 (77%), Gaps = 1/132 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC A+A+DRR G+Q Q + TDFQ++ + +RL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMRGKNCVAVAADRRFGIQAQMVTTDFQKVFPMGERLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ +PVIAGL + +PF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 120 ICTMDSIGAKYV 131
IC++D IG V
Sbjct: 121 ICSLDLIGCPMV 132
>gi|225703360|gb|ACO07526.1| Proteasome subunit beta type 3 [Oncorhynchus mykiss]
Length = 205
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 100/132 (75%), Gaps = 1/132 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GK C AIA+DRR GVQ Q + TDFQ+I + DRL IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKQCVAIAADRRFGVQAQVVTTDFQKIFPMGDRLHIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ +PVIAGL + +PF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 120 ICTMDSIGAKYV 131
IC++D IG V
Sbjct: 121 ICSLDLIGCPMV 132
>gi|325179973|emb|CCA14375.1| proteasome subunit beta type3 putative [Albugo laibachii Nc14]
Length = 204
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 70/129 (54%), Positives = 105/129 (81%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNGSA++AM GK+C IA D RLG+Q QTI+T+FQ++ ++ D++F+GL+GLATD
Sbjct: 1 MSILSYNGSAIIAMAGKDCVGIACDTRLGLQAQTISTNFQKVFRVSDKIFLGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QT+ Q L F+ +Y++ EERD+KPET +S +SA++Y+KRFGP+F +PVIAGL+ +++PF+
Sbjct: 61 QTVSQLLKFKVNMYKMNEERDLKPETLSSYLSAMMYKKRFGPWFIEPVIAGLTADNQPFL 120
Query: 121 CTMDSIGAK 129
+MD +G +
Sbjct: 121 SSMDCLGCE 129
>gi|222136592|ref|NP_001138374.1| proteasome subunit beta type-3 [Sus scrofa]
Length = 205
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 100/132 (75%), Gaps = 1/132 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP T S+V+ LLYE+RFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYERRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKYV 131
IC++D IG V
Sbjct: 121 ICSLDLIGCPMV 132
>gi|312378864|gb|EFR25317.1| hypothetical protein AND_09469 [Anopheles darlingi]
Length = 205
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 77/128 (60%), Positives = 97/128 (75%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG +VAM GKNC AIA+D R GVQ QTIATDF+++ +I+ +++GL GL TD
Sbjct: 1 MSILAYNGGCVVAMKGKNCVAIATDHRFGVQAQTIATDFEKVFEINPHMYLGLVGLQTDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
T+YQRL+FR LY++RE R M PE FA+++S LYEKRFGPYF +PVIAGL + +PF
Sbjct: 61 LTVYQRLIFRKNLYEVRENRQMTPERFAAMLSNFLYEKRFGPYFIEPVIAGLDPKTYEPF 120
Query: 120 ICTMDSIG 127
IC MD IG
Sbjct: 121 ICNMDLIG 128
>gi|327275596|ref|XP_003222559.1| PREDICTED: proteasome subunit beta type-3-like [Anolis
carolinensis]
Length = 205
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 78/128 (60%), Positives = 99/128 (77%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRLFIGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLFIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPF 119
QT+ QRL FR LY+L+E R +KP+T S+VS LLYE+RFGPY+ +PVIAGL +PF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPQTLMSMVSNLLYERRFGPYYTEPVIAGLDPITYEPF 120
Query: 120 ICTMDSIG 127
+C++D IG
Sbjct: 121 VCSLDLIG 128
>gi|225705836|gb|ACO08764.1| Proteasome subunit beta type 3 [Oncorhynchus mykiss]
Length = 205
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 101/132 (76%), Gaps = 1/132 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM G+ C AIA+DRR GVQ Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGQQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ +PVIAGL + +PF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 120 ICTMDSIGAKYV 131
IC++D IG V
Sbjct: 121 ICSLDLIGCPMV 132
>gi|387914628|gb|AFK10923.1| proteasome (prosome, macropain) subunit, beta type, 3
[Callorhinchus milii]
Length = 205
Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 78/128 (60%), Positives = 100/128 (78%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MS YNG+A++AM GKNC AIASDRR G+Q Q + TDFQ+I + +RL+IGL+GLATD
Sbjct: 1 MSHMSYNGAAIMAMKGKNCVAIASDRRFGIQAQLVTTDFQKIYPMGERLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ PVIAGL + +PF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYVDPVIAGLHPKTFEPF 120
Query: 120 ICTMDSIG 127
IC++D IG
Sbjct: 121 ICSLDVIG 128
>gi|440904222|gb|ELR54761.1| Proteasome subunit beta type-3, partial [Bos grunniens mutus]
Length = 205
Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 79/131 (60%), Positives = 99/131 (75%), Gaps = 1/131 (0%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
SI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD Q
Sbjct: 2 SIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQ 61
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFI 120
T+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPFI
Sbjct: 62 TVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFI 121
Query: 121 CTMDSIGAKYV 131
C++D IG V
Sbjct: 122 CSLDLIGCPMV 132
>gi|392877590|gb|AFM87627.1| proteasome (prosome, macropain) subunit, beta type, 3
[Callorhinchus milii]
Length = 205
Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 78/128 (60%), Positives = 100/128 (78%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MS YNG+A++AM GKNC AIASDRR G+Q Q + TDFQ+I + +RL+IGL+GLATD
Sbjct: 1 MSHMSYNGAAIMAMKGKNCVAIASDRRFGIQAQLVTTDFQKIYPMGERLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ PVIAGL + +PF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYVDPVIAGLHPKTFEPF 120
Query: 120 ICTMDSIG 127
IC++D IG
Sbjct: 121 ICSLDVIG 128
>gi|392883970|gb|AFM90817.1| proteasome (prosome, macropain) subunit, beta type, 3
[Callorhinchus milii]
Length = 205
Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 78/128 (60%), Positives = 100/128 (78%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MS YNG+A++AM GKNC AIASDRR G+Q Q + TDFQ+I + +RL+IGL+GLATD
Sbjct: 1 MSHMSYNGAAIMAMKGKNCVAIASDRRFGIQAQLVTTDFQKIYPMGERLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ PVIAGL + +PF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYVDPVIAGLHPKTFEPF 120
Query: 120 ICTMDSIG 127
IC++D IG
Sbjct: 121 ICSLDVIG 128
>gi|355568453|gb|EHH24734.1| Proteasome subunit beta type-3, partial [Macaca mulatta]
Length = 204
Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 79/131 (60%), Positives = 99/131 (75%), Gaps = 1/131 (0%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
SI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD Q
Sbjct: 1 SIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQ 60
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFI 120
T+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPFI
Sbjct: 61 TVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFI 120
Query: 121 CTMDSIGAKYV 131
C++D IG V
Sbjct: 121 CSLDLIGCPMV 131
>gi|58395630|ref|XP_321394.2| AGAP001697-PA [Anopheles gambiae str. PEST]
gi|347966404|ref|XP_003435908.1| AGAP001697-PB [Anopheles gambiae str. PEST]
gi|55233656|gb|EAA00889.2| AGAP001697-PA [Anopheles gambiae str. PEST]
gi|333470074|gb|EGK97505.1| AGAP001697-PB [Anopheles gambiae str. PEST]
Length = 205
Score = 165 bits (417), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 77/128 (60%), Positives = 97/128 (75%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG +VAM GKNC AIA+D R GVQ QTIATDF+++ +I+ +++GL GL TD
Sbjct: 1 MSILAYNGGCVVAMKGKNCVAIATDHRFGVQAQTIATDFEKVFEINPHMYLGLVGLQTDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
T+YQRL+FR LY++RE R M PE FA+++S LYEKRFGPYF +PVIAGL + +PF
Sbjct: 61 LTVYQRLLFRKNLYEVRENRQMTPERFAAMLSNFLYEKRFGPYFIEPVIAGLDPKTYEPF 120
Query: 120 ICTMDSIG 127
IC MD IG
Sbjct: 121 ICNMDLIG 128
>gi|431890707|gb|ELK01586.1| Proteasome subunit beta type-3 [Pteropus alecto]
Length = 234
Score = 165 bits (417), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 79/131 (60%), Positives = 99/131 (75%), Gaps = 1/131 (0%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
SI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD Q
Sbjct: 31 SIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQ 90
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFI 120
T+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPFI
Sbjct: 91 TVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFI 150
Query: 121 CTMDSIGAKYV 131
C++D IG V
Sbjct: 151 CSLDLIGCPMV 161
>gi|148229244|ref|NP_001088741.1| proteasome (prosome, macropain) subunit, beta type, 3 [Xenopus
laevis]
gi|56270462|gb|AAH87395.1| LOC496005 protein [Xenopus laevis]
Length = 205
Score = 165 bits (417), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 77/128 (60%), Positives = 101/128 (78%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GK+C AIA+DRR GVQ Q + TDFQ+I + +RL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAIMAMKGKDCVAIAADRRFGVQAQMVTTDFQKIFPMGERLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+TF S+V+ LLYE+RFGPY+ +PVIAGL + +PF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPKTFMSMVANLLYERRFGPYYIEPVIAGLDPKTFQPF 120
Query: 120 ICTMDSIG 127
IC++D IG
Sbjct: 121 ICSLDLIG 128
>gi|47223967|emb|CAG06144.1| unnamed protein product [Tetraodon nigroviridis]
Length = 230
Score = 165 bits (417), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 77/127 (60%), Positives = 100/127 (78%), Gaps = 1/127 (0%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
SI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + +RL+IGL+GLATD Q
Sbjct: 2 SIMSYNGGAVMAMRGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGERLYIGLAGLATDVQ 61
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFI 120
T+ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ +PVIAGL + +PFI
Sbjct: 62 TVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPFI 121
Query: 121 CTMDSIG 127
C++D IG
Sbjct: 122 CSLDLIG 128
>gi|417397057|gb|JAA45562.1| Putative proteasome subunit beta type-3 [Desmodus rotundus]
Length = 205
Score = 165 bits (417), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 100/132 (75%), Gaps = 1/132 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GK+C AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKDCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRLNLYELKEGRPIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKYV 131
IC++D IG V
Sbjct: 121 ICSLDLIGCPMV 132
>gi|157112534|ref|XP_001651824.1| proteasome subunit beta type [Aedes aegypti]
gi|108878045|gb|EAT42270.1| AAEL006174-PA [Aedes aegypti]
Length = 205
Score = 165 bits (417), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 76/128 (59%), Positives = 99/128 (77%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG +VAM GKNC AIA+D R GVQ QTIATDF+++ +I+ +++GL GL TD
Sbjct: 1 MSILAYNGGCVVAMKGKNCVAIATDHRFGVQAQTIATDFEKVFEINPHMYLGLVGLQTDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
T++QRL+FR LY++RE R+M PE FA+++S LYEKRFGPYF +PVIAGL+ + +PF
Sbjct: 61 LTVHQRLLFRKNLYEVRENREMTPERFAAMLSNFLYEKRFGPYFIEPVIAGLNPKTFEPF 120
Query: 120 ICTMDSIG 127
IC MD IG
Sbjct: 121 ICNMDLIG 128
>gi|323454510|gb|EGB10380.1| hypothetical protein AURANDRAFT_71184 [Aureococcus anophagefferens]
Length = 535
Score = 165 bits (417), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 77/127 (60%), Positives = 97/127 (76%), Gaps = 4/127 (3%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG+A+V M GKNC AIASD R G+ QT++ DFQ++ K DRLF+GL+GLATD QTL
Sbjct: 194 HNGAAIVCMAGKNCVAIASDTRFGLSQQTVSCDFQKVFKQSDRLFVGLAGLATDVQTLRN 253
Query: 66 RLVFRHK----LYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
L F+ + LY+LREER MKPE FA+L+S +LYEKRFGPYF +PV+AGL D+ PF+C
Sbjct: 254 TLKFKREPALALYELREERVMKPEAFAALLSHMLYEKRFGPYFVEPVVAGLKDDGSPFLC 313
Query: 122 TMDSIGA 128
MD IGA
Sbjct: 314 GMDLIGA 320
>gi|193788711|ref|NP_001123295.1| proteasome subunit beta type-3 [Danio rerio]
gi|29124577|gb|AAH49010.1| Psmb3 protein [Danio rerio]
Length = 205
Score = 165 bits (417), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 100/132 (75%), Gaps = 1/132 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GK C AIASDRR G+Q Q + TDFQ+I + +RL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMRGKECVAIASDRRFGIQAQLVTTDFQKIFPMGERLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP TF S+VS LLYE+RFGPY+ +PVIAGL + +PF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPRTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 120 ICTMDSIGAKYV 131
IC++D IG V
Sbjct: 121 ICSLDLIGCPMV 132
>gi|94468582|gb|ABF18140.1| 20S proteasome regulatory subunit beta type PSMB3/PUP3 [Aedes
aegypti]
Length = 205
Score = 164 bits (416), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 76/128 (59%), Positives = 99/128 (77%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG +VAM GKNC AIA+D R GVQ QTIATDF+++ +I+ +++GL GL TD
Sbjct: 1 MSILAYNGGCVVAMKGKNCVAIATDHRFGVQAQTIATDFEKVFEINPHMYLGLVGLQTDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
T++QRL+FR LY++RE R+M PE FA+++S LYEKRFGPYF +PVIAGL+ + +PF
Sbjct: 61 LTVHQRLLFRKNLYEVRENREMTPERFAAMLSNFLYEKRFGPYFIEPVIAGLNPKTFEPF 120
Query: 120 ICTMDSIG 127
IC MD IG
Sbjct: 121 ICNMDLIG 128
>gi|443717932|gb|ELU08769.1| hypothetical protein CAPTEDRAFT_228896 [Capitella teleta]
Length = 205
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/128 (61%), Positives = 98/128 (76%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNGSA+VAM GK+C AIA+DRR G+Q QT+A DFQ+I + L++GL GLATD
Sbjct: 1 MSILSYNGSAIVAMAGKDCVAIAADRRFGIQGQTVALDFQKIYEYGPNLYMGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPF 119
QT+ QRL FR +Y+LRE R MKP+T S+VS LLYE+RFGPYF +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFRVNMYELRENRKMKPQTMLSVVSNLLYERRFGPYFVEPVIAGLDPKTSKPF 120
Query: 120 ICTMDSIG 127
I ++D IG
Sbjct: 121 IASLDLIG 128
>gi|301110580|ref|XP_002904370.1| proteasome subunit beta type-3, putative [Phytophthora infestans
T30-4]
gi|262096496|gb|EEY54548.1| proteasome subunit beta type-3, putative [Phytophthora infestans
T30-4]
Length = 204
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 68/127 (53%), Positives = 103/127 (81%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG+A++AM GK+C IA D RLG+Q QT+A DFQ++ ++ D+ F+GL+GLATD
Sbjct: 1 MSILSYNGAAIIAMAGKDCVGIACDTRLGMQAQTVAMDFQKVFRVTDKTFLGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
Q++ Q L F+ +Y++ EERD+KP+T ++L+S ++YEKRFGP+F +PVIAGL++++KPF+
Sbjct: 61 QSVSQLLKFKINMYKMNEERDIKPKTLSALLSNMMYEKRFGPWFVEPVIAGLTEDNKPFL 120
Query: 121 CTMDSIG 127
+MD +G
Sbjct: 121 SSMDCLG 127
>gi|348521013|ref|XP_003448021.1| PREDICTED: proteasome subunit beta type-3-like [Oreochromis
niloticus]
Length = 202
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/127 (60%), Positives = 99/127 (77%), Gaps = 1/127 (0%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD QT+ Q
Sbjct: 3 YNGGAVMAMRGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQ 62
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMD 124
RL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ +PVIAGL + +PFIC++D
Sbjct: 63 RLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPFICSLD 122
Query: 125 SIGAKYV 131
IG V
Sbjct: 123 LIGCPMV 129
>gi|281344355|gb|EFB19939.1| hypothetical protein PANDA_004975 [Ailuropoda melanoleuca]
Length = 190
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/131 (59%), Positives = 99/131 (75%), Gaps = 1/131 (0%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
SI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD Q
Sbjct: 2 SIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQ 61
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFI 120
T+ QRL FR LY+L+E R +KP T S+V+ LLYE+RFGPY+ +PVIAGL + KPFI
Sbjct: 62 TVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYERRFGPYYTEPVIAGLDPKTFKPFI 121
Query: 121 CTMDSIGAKYV 131
C++D IG V
Sbjct: 122 CSLDLIGCPMV 132
>gi|156539935|ref|XP_001599218.1| PREDICTED: proteasome subunit beta type-3-like isoform 1 [Nasonia
vitripennis]
Length = 205
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 75/128 (58%), Positives = 99/128 (77%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q QTI+ +FQ+I ++ L++GL GLATDS
Sbjct: 1 MSILAYNGGAIIAMKGKNCVAIAADRRFGIQAQTISCNFQKIYEMGPHLYLGLPGLATDS 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ +RL FR LY+L+E R + P+TF S++S LLYE+RFGPYF +P++AGL E +PF
Sbjct: 61 QTVMERLRFRLNLYELKESRTIHPKTFGSMISNLLYERRFGPYFVEPIVAGLDPETFEPF 120
Query: 120 ICTMDSIG 127
IC MD IG
Sbjct: 121 ICNMDLIG 128
>gi|170030525|ref|XP_001843139.1| proteasome subunit beta type 3 [Culex quinquefasciatus]
gi|167867380|gb|EDS30763.1| proteasome subunit beta type 3 [Culex quinquefasciatus]
Length = 205
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/128 (60%), Positives = 97/128 (75%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG +VAM GKNC AIA+D R GVQ QTIATDF++I +I+ +++GL GL TD
Sbjct: 1 MSILAYNGGCVVAMKGKNCVAIATDHRFGVQAQTIATDFEKIFEINPHMYLGLVGLQTDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
T++QRL+FR LY++RE R M PE FA+++S LYEKRFGPYF +PVIAGL + +PF
Sbjct: 61 LTVHQRLLFRKNLYEVRENRQMTPERFAAMLSNFLYEKRFGPYFIEPVIAGLDPKSYEPF 120
Query: 120 ICTMDSIG 127
IC MD IG
Sbjct: 121 ICNMDLIG 128
>gi|384501018|gb|EIE91509.1| hypothetical protein RO3G_16220 [Rhizopus delemar RA 99-880]
Length = 204
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 72/127 (56%), Positives = 98/127 (77%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI +YNG ++VAMVGK+C AIA+D+RLG Q T++T+FQ+I K ++ IGL GLATD
Sbjct: 1 MSIMQYNGGSVVAMVGKDCVAIAADKRLGAQFMTVSTEFQKIFKATEKTLIGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
TL R F+ +Y++REER+++P+ A +VS+ LYE+RFGPYF +PVIAGL +KPFI
Sbjct: 61 ITLADRFRFKTNMYKMREEREIEPKALAHMVSSTLYERRFGPYFVEPVIAGLDKHNKPFI 120
Query: 121 CTMDSIG 127
C+MD IG
Sbjct: 121 CSMDLIG 127
>gi|348667371|gb|EGZ07196.1| hypothetical protein PHYSODRAFT_288866 [Phytophthora sojae]
Length = 204
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 67/127 (52%), Positives = 104/127 (81%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG+A++AM GK+C IA D RLG+Q QT+A DFQ++ ++ D+ F+GL+GLATD
Sbjct: 1 MSILSYNGAAIIAMAGKDCVGIACDTRLGMQAQTVAMDFQKVFRVTDKTFLGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
Q++ Q L F+ +Y++ EER++KP+T ++L+S+++YEKRFGP+F +PVIAGL++++KPF+
Sbjct: 61 QSVSQLLKFKLNMYKMNEEREIKPKTLSALLSSMMYEKRFGPWFVEPVIAGLTEDNKPFL 120
Query: 121 CTMDSIG 127
+MD +G
Sbjct: 121 SSMDCLG 127
>gi|198423327|ref|XP_002125759.1| PREDICTED: similar to LOC496005 protein [Ciona intestinalis]
Length = 205
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/128 (62%), Positives = 98/128 (76%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A+VAM GKNC AIASD R G+Q QT+ DF++I + +RL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVVAMKGKNCVAIASDLRFGIQAQTVGMDFEKIFPMSERLYIGLTGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDK-PF 119
QT+ QRL F+ KLY+LRE R + P+TF S+VS LLYEKRFGPYF +PVIAGL + K PF
Sbjct: 61 QTVSQRLQFQLKLYELRENRQISPKTFLSVVSNLLYEKRFGPYFIEPVIAGLDPKTKEPF 120
Query: 120 ICTMDSIG 127
I + D IG
Sbjct: 121 IASCDLIG 128
>gi|351706755|gb|EHB09674.1| Proteasome subunit beta type-3 [Heterocephalus glaber]
Length = 217
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 77/131 (58%), Positives = 99/131 (75%), Gaps = 1/131 (0%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
SI YNG A++AM GKNC AIA+D+R G+Q Q + TDFQ+I + DRL+IGL+GLATD Q
Sbjct: 14 SIMSYNGGAVMAMKGKNCVAIAADKRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQ 73
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFI 120
T+ QRL FR LY+L+E R +KP T S+V+ LLYE+RFGPY+ +PVIAGL + KPFI
Sbjct: 74 TVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYERRFGPYYTEPVIAGLDPKTFKPFI 133
Query: 121 CTMDSIGAKYV 131
C++D IG V
Sbjct: 134 CSLDLIGCPMV 144
>gi|149054060|gb|EDM05877.1| rCG33987, isoform CRA_d [Rattus norvegicus]
Length = 202
Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 77/127 (60%), Positives = 97/127 (76%), Gaps = 1/127 (0%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD QT+ Q
Sbjct: 3 YNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQ 62
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMD 124
RL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPFIC++D
Sbjct: 63 RLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLD 122
Query: 125 SIGAKYV 131
IG V
Sbjct: 123 LIGCPMV 129
>gi|383854573|ref|XP_003702795.1| PREDICTED: proteasome subunit beta type-3-like [Megachile
rotundata]
Length = 205
Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 76/128 (59%), Positives = 98/128 (76%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
M I +YNG A++AM GKNC AIA+DRR G+Q QTI DFQ+I ++ L++ L GLATD+
Sbjct: 1 MGILDYNGGAIIAMRGKNCVAIAADRRFGIQAQTITCDFQKIFEMGPHLYMSLPGLATDT 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ +RL FR LY+L+E R + P+TFAS+VS LLYE+RFGPYF QP+IAGLS +P+
Sbjct: 61 QTVMERLRFRLNLYELKENRKIHPKTFASMVSNLLYERRFGPYFVQPIIAGLSPVTFEPY 120
Query: 120 ICTMDSIG 127
IC MD IG
Sbjct: 121 ICNMDVIG 128
>gi|328864212|gb|AEB53189.1| proteasome subunit beta type 3 [Holothuria glaberrima]
Length = 202
Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 110/158 (69%), Gaps = 8/158 (5%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
YNGSA+VAM GK+C AIASDRR G+Q QT++ + Q+I ++ RL+IGLSGLATD QT+
Sbjct: 3 YNGSAIVAMRGKDCVAIASDRRFGIQAQTVSMECQKIFEMAPRLYIGLSGLATDVQTVSN 62
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMD 124
RL FR LY LRE RD+KP+TF S+V+ LLYE+RFGPYF +PVIAGL + +PFIC +D
Sbjct: 63 RLKFRLNLYTLRENRDIKPKTFMSMVANLLYERRFGPYFTEPVIAGLDPKTFEPFICNLD 122
Query: 125 SIGAKYVGSLQKILLLLELLESLFMVPVRQCSSLIWNP 162
IG + + ++ E L+ + C SL W P
Sbjct: 123 LIGCPMI--TEDFVVAGTCTEQLYGM----CESL-WKP 153
>gi|219126883|ref|XP_002183677.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404914|gb|EEC44859.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 204
Score = 161 bits (408), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 76/128 (59%), Positives = 102/128 (79%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG+A++AM GK+C IA+DRRLGVQLQT+ATDF ++ + + ++GL+GLATD
Sbjct: 1 MSILEYNGAAMIAMAGKDCVGIAADRRLGVQLQTVATDFNKVFAMGPKSYVGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTL L FR LY+L+EER+M P T + L+S LLYEKRFGPYF +P++AGL++++KPF+
Sbjct: 61 QTLKNILEFRKNLYELKEEREMSPATLSHLLSTLLYEKRFGPYFVEPIVAGLNEKNKPFL 120
Query: 121 CTMDSIGA 128
MD IGA
Sbjct: 121 SAMDLIGA 128
>gi|19075485|ref|NP_587985.1| 20S proteasome component beta 3, Pup3 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|17380272|sp|Q9Y7T8.1|PSB3_SCHPO RecName: Full=Probable proteasome subunit beta type-3
gi|4539605|emb|CAB40016.1| 20S proteasome component beta 3, Pup3 (predicted)
[Schizosaccharomyces pombe]
Length = 204
Score = 161 bits (408), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 73/127 (57%), Positives = 98/127 (77%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG + VAM GKNC AIASD RLGVQ ++ +F ++ + D+ ++GL+GLATD
Sbjct: 1 MSIMEYNGGSCVAMAGKNCVAIASDLRLGVQSISLTNNFPKVFAMGDKTYLGLTGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTLY+ ++ LY+ REER ++P+TFA+LVS+ LYEKRFGPYF PV+AG+S+++ PFI
Sbjct: 61 QTLYELFRYKVNLYKFREERQIQPKTFANLVSSTLYEKRFGPYFSFPVVAGVSNDNTPFI 120
Query: 121 CTMDSIG 127
C DSIG
Sbjct: 121 CGFDSIG 127
>gi|114052162|ref|NP_001040460.1| proteasome beta 3 subunit [Bombyx mori]
gi|95102980|gb|ABF51431.1| proteasome beta 3 subunit [Bombyx mori]
Length = 205
Score = 161 bits (408), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 71/128 (55%), Positives = 102/128 (79%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A+VAM G++C AIA+D+R G+Q QT++T+F ++ ++ L++GL GLATD+
Sbjct: 1 MSILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDT 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT++QRL FR LY+L+E R M+P+TF++++S LLYE+RFGPYF +PVIAGL D +P+
Sbjct: 61 QTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPY 120
Query: 120 ICTMDSIG 127
+C MD IG
Sbjct: 121 VCNMDLIG 128
>gi|301762874|ref|XP_002916854.1| PREDICTED: proteasome subunit beta type-3-like [Ailuropoda
melanoleuca]
Length = 202
Score = 161 bits (408), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 76/127 (59%), Positives = 97/127 (76%), Gaps = 1/127 (0%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD QT+ Q
Sbjct: 3 YNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQ 62
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMD 124
RL FR LY+L+E R +KP T S+V+ LLYE+RFGPY+ +PVIAGL + KPFIC++D
Sbjct: 63 RLKFRLNLYELKEGRQIKPYTLMSMVANLLYERRFGPYYTEPVIAGLDPKTFKPFICSLD 122
Query: 125 SIGAKYV 131
IG V
Sbjct: 123 LIGCPMV 129
>gi|332375660|gb|AEE62971.1| unknown [Dendroctonus ponderosae]
Length = 205
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 72/128 (56%), Positives = 98/128 (76%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM G+NC AIA+DRR GVQ QT+AT+F++I ++ L++GL GLATD+
Sbjct: 1 MSILTYNGGAMLAMKGENCVAIAADRRFGVQAQTLATNFEKIFEMGSHLYVGLPGLATDT 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ ++L FR +Y+L+E R M P F+++VS LLYE RFGPYF +PV+AGL + +PF
Sbjct: 61 QTVMEKLRFRKNIYELKENRAMSPRVFSAMVSHLLYENRFGPYFVEPVVAGLEPKTFEPF 120
Query: 120 ICTMDSIG 127
IC MD IG
Sbjct: 121 ICNMDLIG 128
>gi|307175918|gb|EFN65731.1| Proteasome subunit beta type-3 [Camponotus floridanus]
Length = 286
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/129 (58%), Positives = 97/129 (75%), Gaps = 1/129 (0%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
SI YNG A++AM GKNC AIA+DRR G+Q QTI DFQ+I ++ LFI L GLATD+Q
Sbjct: 83 SILAYNGGAVIAMKGKNCVAIAADRRFGIQAQTIMCDFQKIFEMEPHLFISLPGLATDTQ 142
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFI 120
T+ +RL FR LY+L+E R + P+TF ++VS LLYEKRFGPYF +P+IAGL +PFI
Sbjct: 143 TVMERLRFRLNLYELKENRKIHPKTFTAMVSNLLYEKRFGPYFVEPIIAGLDPVTFEPFI 202
Query: 121 CTMDSIGAK 129
C MD IG++
Sbjct: 203 CNMDLIGSR 211
>gi|126308249|ref|XP_001371633.1| PREDICTED: proteasome subunit beta type-3-like [Monodelphis
domestica]
Length = 202
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/127 (59%), Positives = 97/127 (76%), Gaps = 1/127 (0%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD QT+ Q
Sbjct: 3 YNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQ 62
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMD 124
RL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + +PFIC++D
Sbjct: 63 RLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLHPKTFEPFICSLD 122
Query: 125 SIGAKYV 131
IG V
Sbjct: 123 LIGCPMV 129
>gi|340724396|ref|XP_003400568.1| PREDICTED: proteasome subunit beta type-3-like [Bombus terrestris]
Length = 205
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/128 (59%), Positives = 98/128 (76%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q QTI DFQ+I ++ L++ L GLATD+
Sbjct: 1 MSILAYNGGAIIAMKGKNCVAIAADRRFGIQAQTITCDFQKIFEMGSHLYLSLPGLATDT 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ ++L FR LY+L+E R + P+TFAS+VS LLYE+RFGPYF +PVIAGLS +PF
Sbjct: 61 QTVMEKLRFRLNLYELKENRKIHPKTFASMVSNLLYERRFGPYFVEPVIAGLSPVTYEPF 120
Query: 120 ICTMDSIG 127
IC +D IG
Sbjct: 121 ICNVDLIG 128
>gi|383127955|gb|AFG44635.1| hypothetical protein CL406Contig2_01, partial [Pinus taeda]
Length = 86
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/86 (86%), Positives = 81/86 (94%)
Query: 30 VQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFAS 89
VQLQTIATDFQRI KIHD+L++GLSGLATD QTLYQR FRHKLYQLREER+M+PETFAS
Sbjct: 1 VQLQTIATDFQRIFKIHDKLYVGLSGLATDVQTLYQRFAFRHKLYQLREERNMRPETFAS 60
Query: 90 LVSALLYEKRFGPYFCQPVIAGLSDE 115
LVSALLYEKRFGPYFCQPVIAGL ++
Sbjct: 61 LVSALLYEKRFGPYFCQPVIAGLGED 86
>gi|322800746|gb|EFZ21650.1| hypothetical protein SINV_15015 [Solenopsis invicta]
Length = 218
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/130 (56%), Positives = 98/130 (75%), Gaps = 1/130 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q QTI DFQ+I ++ L++ L GLATD+
Sbjct: 14 MSILAYNGGAVIAMKGKNCVAIAADRRFGIQAQTIMCDFQKIYEMGPHLYVSLPGLATDT 73
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ +RL FR LY+L+E R + P+TF +++S LLYEKRFGPYF +P++AGL +PF
Sbjct: 74 QTVMERLRFRLNLYELKENRKIHPKTFTAMISNLLYEKRFGPYFVEPIVAGLDPVTFEPF 133
Query: 120 ICTMDSIGAK 129
IC MD IG++
Sbjct: 134 ICNMDLIGSR 143
>gi|380022329|ref|XP_003695002.1| PREDICTED: proteasome subunit beta type-3-like [Apis florea]
Length = 205
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/128 (57%), Positives = 97/128 (75%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q QTI DFQ+I ++ L++ L GLATD+
Sbjct: 1 MSILAYNGGAIIAMKGKNCVAIAADRRFGIQAQTITCDFQKIFEMGSHLYLSLPGLATDT 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ ++L FR LY+L+E R + P+ FAS+VS LLYE+RFGPYF +P+IAGL+ +PF
Sbjct: 61 QTVMEKLRFRLNLYELKENRKIHPKAFASMVSNLLYERRFGPYFVEPIIAGLNPNTYEPF 120
Query: 120 ICTMDSIG 127
IC MD IG
Sbjct: 121 ICNMDLIG 128
>gi|328785087|ref|XP_624958.3| PREDICTED: proteasome subunit beta type-3-like [Apis mellifera]
Length = 205
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/128 (57%), Positives = 97/128 (75%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q QTI DFQ+I ++ L++ L GLATD+
Sbjct: 1 MSILAYNGGAIIAMKGKNCVAIAADRRFGIQAQTITCDFQKIFEMGSHLYLSLPGLATDT 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ ++L FR LY+L+E R + P+ FAS+VS LLYE+RFGPYF +P+IAGL+ +PF
Sbjct: 61 QTVMEKLRFRLNLYELKENRKIHPKAFASMVSNLLYERRFGPYFVEPIIAGLNPNTYEPF 120
Query: 120 ICTMDSIG 127
IC MD IG
Sbjct: 121 ICNMDLIG 128
>gi|393233198|gb|EJD40772.1| 20S proteasome subunit beta 3 [Auricularia delicata TFB-10046 SS5]
Length = 207
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 98/130 (75%), Gaps = 3/130 (2%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG +++AMVGKNC AIASD RLG Q T+AT+F+++ + DR+++GL GLATD
Sbjct: 1 MSIMEYNGGSVIAMVGKNCVAIASDLRLGNQALTVATNFEKVFPVTDRIYLGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE---DK 117
TL +R +R +Y ++EER+++PETFA LVS+ LYE+RFGPYF +PVIAGL+ K
Sbjct: 61 ATLRERFRYRVNMYTIKEEREIEPETFAHLVSSTLYERRFGPYFIEPVIAGLTSPARGSK 120
Query: 118 PFICTMDSIG 127
PFI D IG
Sbjct: 121 PFIAATDLIG 130
>gi|350397681|ref|XP_003484954.1| PREDICTED: proteasome subunit beta type-3-like [Bombus impatiens]
Length = 205
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/128 (58%), Positives = 98/128 (76%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q QTI DFQ+I ++ L++ L GLATD+
Sbjct: 1 MSILAYNGGAIIAMKGKNCVAIAADRRFGIQAQTITCDFQKIFEMGSHLYLSLPGLATDT 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ ++L FR LY+L+E R + P+TFAS+VS LLYE+RFGPYF +PVIAGLS +PF
Sbjct: 61 QTVMEKLRFRLNLYELKENRKIHPKTFASMVSNLLYERRFGPYFVEPVIAGLSPVTYEPF 120
Query: 120 ICTMDSIG 127
+C +D IG
Sbjct: 121 VCNVDLIG 128
>gi|225705338|gb|ACO08515.1| Proteasome subunit beta type 3 [Oncorhynchus mykiss]
Length = 205
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 99/132 (75%), Gaps = 1/132 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GK C AIA+DRR GVQ Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ +PVIAGL + +PF
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPF 120
Query: 120 ICTMDSIGAKYV 131
I ++ IG V
Sbjct: 121 IRSLGLIGCPMV 132
>gi|332017819|gb|EGI58480.1| Proteasome subunit beta type-3 [Acromyrmex echinatior]
Length = 238
Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 71/132 (53%), Positives = 98/132 (74%), Gaps = 1/132 (0%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
SI YNG A++AM GKNC AIA+DRR G+Q QTI DFQ+I ++ L++ L GLATD+Q
Sbjct: 35 SILAYNGGAVIAMKGKNCVAIAADRRFGIQAQTITCDFQKIYEMGPHLYVSLPGLATDTQ 94
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFI 120
T+ +RL FR LY+L+E R + P+TF +++S LLYE+RFGPYF +P++AGL +PFI
Sbjct: 95 TVMERLRFRLNLYELKENRKIHPKTFTAMISNLLYERRFGPYFVEPIVAGLDPVTFEPFI 154
Query: 121 CTMDSIGAKYVG 132
C MD IG++ +
Sbjct: 155 CNMDLIGSRNIA 166
>gi|348562309|ref|XP_003466953.1| PREDICTED: proteasome subunit beta type-3-like [Cavia porcellus]
Length = 202
Score = 159 bits (401), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 74/127 (58%), Positives = 97/127 (76%), Gaps = 1/127 (0%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
YNG A++AM GKNC AIA+D+R G+Q Q + TDFQ+I + DRL+IGL+GLATD QT+ Q
Sbjct: 3 YNGGAVMAMKGKNCVAIAADKRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQ 62
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMD 124
RL FR LY+L+E R +KP T S+V+ LLYE+RFGPY+ +PVIAGL + +PFIC++D
Sbjct: 63 RLKFRLNLYELKEGRQIKPYTLMSMVANLLYERRFGPYYTEPVIAGLDPKTFQPFICSLD 122
Query: 125 SIGAKYV 131
IG V
Sbjct: 123 LIGCPMV 129
>gi|303287020|ref|XP_003062799.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455435|gb|EEH52738.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 206
Score = 158 bits (400), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 80/152 (52%), Positives = 103/152 (67%), Gaps = 4/152 (2%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGV-QLQTIATDFQRISKIHDRLFIGLSGLATD 59
+SI YNG+A++AM GKNC AIASD R G+ Q QT A D ++I +IH L++GLSG +
Sbjct: 1 VSIMSYNGAAIIAMCGKNCVAIASDLRFGINQQQTTAVDMKKIYEIHPHLYVGLSGASES 60
Query: 60 SQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KP 118
+ Y R FRH LY+LRE RDM+PETFA++VSA+LYEKRFGPY+ +PV+AGL +P
Sbjct: 61 HWSPYDRFAFRHNLYKLREGRDMRPETFANVVSAMLYEKRFGPYYAEPVVAGLDPVTFEP 120
Query: 119 FICTMDSIGAKYVGSLQKILLLLELLESLFMV 150
FI MD IGA ++ ESLF V
Sbjct: 121 FITGMDLIGA--AAPTDNFVVCGNNEESLFGV 150
>gi|452824977|gb|EME31976.1| proteasome beta subunit [Galdieria sulphuraria]
Length = 206
Score = 158 bits (399), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 71/127 (55%), Positives = 95/127 (74%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
SI YNG ++AM G NC AIA+DRR GVQ TI TD RI KI+DRL +GL+GL TD
Sbjct: 4 SILTYNGGCVLAMAGDNCVAIAADRRFGVQQTTIGTDTTRIFKINDRLMLGLTGLRTDVT 63
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
TLY R V R LY+LREER++KP +FA++V++ LY +RF PYF +PV+AGL+++ +P++C
Sbjct: 64 TLYNRFVQRLNLYRLREEREIKPASFANMVASTLYSRRFSPYFVEPVVAGLTEKGEPYLC 123
Query: 122 TMDSIGA 128
D +GA
Sbjct: 124 AQDLLGA 130
>gi|321456221|gb|EFX67334.1| hypothetical protein DAPPUDRAFT_231791 [Daphnia pulex]
Length = 205
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/128 (60%), Positives = 96/128 (75%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG ++AM GK C AIASDRR GVQ T+A DFQRI ++ L+IGL GLATD+
Sbjct: 1 MSILSYNGGCVLAMKGKGCVAIASDRRFGVQTSTLAMDFQRIFEMGPHLYIGLPGLATDT 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
T+++RL FR LY+LRE R +KP+TF+++VS LLYE+RFGPYF +PVIAGL +PF
Sbjct: 61 LTVHERLRFRLNLYELRESRKIKPQTFSAMVSNLLYERRFGPYFVEPVIAGLDPVTWEPF 120
Query: 120 ICTMDSIG 127
I MD IG
Sbjct: 121 ISAMDLIG 128
>gi|242018983|ref|XP_002429948.1| proteasome subunit beta type, putative [Pediculus humanus corporis]
gi|212514994|gb|EEB17210.1| proteasome subunit beta type, putative [Pediculus humanus corporis]
Length = 190
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/123 (58%), Positives = 95/123 (77%), Gaps = 1/123 (0%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG A+VA+ GKNC AIASDRR GV QTI+ +FQ+I ++ L++GL GLATD+QT+YQ
Sbjct: 6 HNGGAVVAVTGKNCVAIASDRRFGVGAQTISCNFQKIFEMGPHLYVGLPGLATDTQTVYQ 65
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTMD 124
RL FR LY+L+E R + P+TF+ ++S LLYE+RFGPYF +PV+AGL KPF+C MD
Sbjct: 66 RLRFRLNLYELKEGRKIAPKTFSHMMSNLLYERRFGPYFVEPVVAGLDPTTGKPFVCNMD 125
Query: 125 SIG 127
IG
Sbjct: 126 LIG 128
>gi|346469345|gb|AEO34517.1| hypothetical protein [Amblyomma maculatum]
Length = 205
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/128 (58%), Positives = 96/128 (75%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG ++AM GK+C AIA+DRRLG + TIA DFQRI ++ +L+ GL GLATD+
Sbjct: 1 MSIMSYNGGVVLAMKGKDCVAIAADRRLGARGHTIALDFQRIFEMGPKLYCGLPGLATDT 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPF 119
QT+ QRL FR LY+LRE R + P+T S++S LLYE+RFGPYF QPV+AGL ++P+
Sbjct: 61 QTVAQRLKFRINLYELREGRKITPKTLGSVISNLLYERRFGPYFVQPVVAGLDPVTNEPY 120
Query: 120 ICTMDSIG 127
IC MD IG
Sbjct: 121 ICVMDLIG 128
>gi|148677981|gb|EDL09928.1| mCG1283 [Mus musculus]
Length = 205
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMPYNGGAVMAMKGKNCVAIAADRCFGIQAQMVTTDFQKIFALGDRLYIGLAGLATDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL FR LY L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + K F
Sbjct: 61 QTVAQRLKFRLNLYMLKEGRHIKPFTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKLF 120
Query: 120 ICTMDSIGAKYV 131
IC++D IG V
Sbjct: 121 ICSLDLIGCPMV 132
>gi|196476700|gb|ACG76215.1| proteasome beta 3 subunit [Amblyomma americanum]
Length = 182
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/128 (58%), Positives = 96/128 (75%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG ++AM GK+C AIA+DRRLG + TIA DFQRI ++ +L+ GL GLATD+
Sbjct: 1 MSIMSYNGGVVLAMKGKDCVAIAADRRLGARGHTIALDFQRIFEMGPKLYCGLPGLATDT 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPF 119
QT+ QRL FR LY+LRE R + P+T S++S LLYE+RFGPYF QPV+AGL ++P+
Sbjct: 61 QTVAQRLKFRINLYELREGRKITPKTLGSVISNLLYERRFGPYFVQPVVAGLDPVSNEPY 120
Query: 120 ICTMDSIG 127
IC MD IG
Sbjct: 121 ICGMDLIG 128
>gi|344232930|gb|EGV64803.1| proteasome-domain-containing protein [Candida tenuis ATCC 10573]
gi|344232931|gb|EGV64804.1| hypothetical protein CANTEDRAFT_113576 [Candida tenuis ATCC 10573]
Length = 205
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/121 (58%), Positives = 94/121 (77%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG + VAMVGK+C AIA D RLG Q +A +F++I I+D++ +GL+GLATD TL +
Sbjct: 8 NGGSAVAMVGKDCVAIACDLRLGSQSLGLANNFEKIFTINDKVMLGLTGLATDVTTLNEV 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
F++ LY+LREER ++P+TFA+LVS+ LYEKRFGPYFC PV+AGL+ E+KPFIC D I
Sbjct: 68 FRFKNNLYELREERKIEPQTFANLVSSTLYEKRFGPYFCGPVVAGLNKENKPFICGFDLI 127
Query: 127 G 127
G
Sbjct: 128 G 128
>gi|353239440|emb|CCA71352.1| probable PUP3-20S proteasome subunit beta3 [Piriformospora indica
DSM 11827]
Length = 205
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/128 (57%), Positives = 97/128 (75%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG ++VAM GK+C AIASD RLG Q TIAT+F+++ + +R+ +G++GLATD
Sbjct: 1 MSIMEYNGGSVVAMAGKDCVAIASDLRLGNQALTIATNFEKVFPVTERIMLGMAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-DEDKPF 119
TL R FR +Y ++EER+++PETFA LVS+ LYE+RFGPYF +PVIAGL +KPF
Sbjct: 61 LTLRDRFRFRVNMYTIKEEREIEPETFAHLVSSTLYERRFGPYFIEPVIAGLGKGTNKPF 120
Query: 120 ICTMDSIG 127
I + D IG
Sbjct: 121 IASTDVIG 128
>gi|289742193|gb|ADD19844.1| 20S proteasome regulatory subunit beta type PSMB3/PUP3 [Glossina
morsitans morsitans]
Length = 205
Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 73/128 (57%), Positives = 95/128 (74%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG +VAM GK+C AI +DRR GVQ QTI+TDF ++ +++ R+F+GL GL TD
Sbjct: 1 MSILTYNGGCVVAMRGKDCVAIGTDRRFGVQAQTISTDFDKVFQMNPRMFLGLVGLQTDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
T+ RL FR LY+ RE R+M+PE FA+++S+ LYE RFGP+F +PVIAGL E +PF
Sbjct: 61 LTVKDRLHFRKSLYETRENREMQPERFAAMLSSFLYEHRFGPFFIEPVIAGLDPETMEPF 120
Query: 120 ICTMDSIG 127
IC MD IG
Sbjct: 121 ICNMDLIG 128
>gi|440804462|gb|ELR25339.1| 20S proteasome subunit beta 3, putative [Acanthamoeba castellanii
str. Neff]
Length = 192
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 70/116 (60%), Positives = 89/116 (76%), Gaps = 1/116 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
M GKNC AIA D+R G+Q QT+A + ++ +++ + F+GLSGL +D+QTL+ R FRH L
Sbjct: 1 MTGKNCVAIACDKRFGIQHQTLAFNMPKVKQLNSKTFVGLSGLVSDAQTLFNRFQFRHNL 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGA 128
Y+LRE R+M PETFA+LVS +LYEKRFGPYF +PVI GLS D KPFI MD IGA
Sbjct: 61 YKLRENREMDPETFANLVSTMLYEKRFGPYFVEPVICGLSGPDNKPFIAAMDLIGA 116
>gi|196002749|ref|XP_002111242.1| hypothetical protein TRIADDRAFT_50102 [Trichoplax adhaerens]
gi|190587193|gb|EDV27246.1| hypothetical protein TRIADDRAFT_50102 [Trichoplax adhaerens]
Length = 191
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 72/114 (63%), Positives = 86/114 (75%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
M GKNC AIA+DRR G+Q QTI +FQRI + D L+IG SGLATD T+ +L FR +
Sbjct: 1 MTGKNCVAIAADRRFGIQAQTIGHEFQRIYGMSDHLYIGFSGLATDVTTVSNKLKFRLNM 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
Y LRE R+MKPETF SLVS+LLYEKRFGPYF +PVIAGL KPF+ ++D IG
Sbjct: 61 YMLRENREMKPETFMSLVSSLLYEKRFGPYFVEPVIAGLDKNAKPFVGSLDLIG 114
>gi|256070135|ref|XP_002571401.1| proteasome subunit beta 3 (T01 family) [Schistosoma mansoni]
gi|350646867|emb|CCD58588.1| proteasome subunit beta 3 (T01 family) [Schistosoma mansoni]
Length = 205
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 70/128 (54%), Positives = 97/128 (75%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI +NGSA++AM GK+C AIA D R GV LQTI+TDF ++ + RL++G GLATD+
Sbjct: 1 MSILAHNGSAVIAMSGKDCAAIACDLRFGVNLQTISTDFTKVYPLGPRLYVGFPGLATDN 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPF 119
QT++QRL FR +Y+LRE + +KP+T +++S LLYE+RFGPYF +PVIAG+ +KP+
Sbjct: 61 QTVFQRLQFRKNMYELRENKTIKPQTITTMLSNLLYERRFGPYFVEPVIAGIDHTTNKPY 120
Query: 120 ICTMDSIG 127
+ MD IG
Sbjct: 121 VACMDLIG 128
>gi|256070137|ref|XP_002571402.1| proteasome subunit beta 3 (T01 family) [Schistosoma mansoni]
gi|350646868|emb|CCD58589.1| proteasome subunit beta 3 (T01 family) [Schistosoma mansoni]
Length = 194
Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 70/128 (54%), Positives = 97/128 (75%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI +NGSA++AM GK+C AIA D R GV LQTI+TDF ++ + RL++G GLATD+
Sbjct: 1 MSILAHNGSAVIAMSGKDCAAIACDLRFGVNLQTISTDFTKVYPLGPRLYVGFPGLATDN 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPF 119
QT++QRL FR +Y+LRE + +KP+T +++S LLYE+RFGPYF +PVIAG+ +KP+
Sbjct: 61 QTVFQRLQFRKNMYELRENKTIKPQTITTMLSNLLYERRFGPYFVEPVIAGIDHTTNKPY 120
Query: 120 ICTMDSIG 127
+ MD IG
Sbjct: 121 VACMDLIG 128
>gi|170085607|ref|XP_001874027.1| 20S proteasome subunit beta 3 [Laccaria bicolor S238N-H82]
gi|164651579|gb|EDR15819.1| 20S proteasome subunit beta 3 [Laccaria bicolor S238N-H82]
Length = 208
Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 96/131 (73%), Gaps = 4/131 (3%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG ++VAMVGK+C AIASD RLG Q I+++FQ+I I DR+++GL GLATD
Sbjct: 1 MSIMEYNGGSVVAMVGKDCVAIASDLRLGNQALGISSNFQKIFPITDRIYLGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED---- 116
TL +R FR +Y ++EER+++PETFA LVS+ LYE RFGPYF +PV+AGLS
Sbjct: 61 TTLRERFRFRVNMYTIKEEREIEPETFAHLVSSTLYEHRFGPYFVEPVMAGLSKTPSGGV 120
Query: 117 KPFICTMDSIG 127
KPFI D IG
Sbjct: 121 KPFIAATDLIG 131
>gi|194744578|ref|XP_001954770.1| GF18436 [Drosophila ananassae]
gi|190627807|gb|EDV43331.1| GF18436 [Drosophila ananassae]
Length = 205
Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 72/128 (56%), Positives = 94/128 (73%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG +VAM GK+C AIA+D R GVQ QTI+TDF+++ I R+F+GL+GL TD
Sbjct: 1 MSILAYNGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVFHIAPRMFLGLTGLQTDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
T+ RL+FR LY+ RE R+M P+ F++++S+ LYE RFGPYF +PV+AGL KPF
Sbjct: 61 LTVRDRLMFRKNLYETRENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPHTLKPF 120
Query: 120 ICTMDSIG 127
IC MD IG
Sbjct: 121 ICNMDLIG 128
>gi|269972971|emb|CBE67030.1| CG11981-PA [Drosophila atripex]
gi|269973424|emb|CBE66639.1| CG11981-PA [Drosophila ananassae]
gi|269973426|emb|CBE66640.1| CG11981-PA [Drosophila ananassae]
gi|269973428|emb|CBE66641.1| CG11981-PA [Drosophila ananassae]
gi|269973430|emb|CBE66642.1| CG11981-PA [Drosophila ananassae]
gi|269973432|emb|CBE66643.1| CG11981-PA [Drosophila ananassae]
gi|269973434|emb|CBE66644.1| CG11981-PA [Drosophila ananassae]
gi|269973436|emb|CBE66645.1| CG11981-PA [Drosophila ananassae]
gi|269973438|emb|CBE66646.1| CG11981-PA [Drosophila ananassae]
gi|269973440|emb|CBE66647.1| CG11981-PA [Drosophila ananassae]
gi|269973442|emb|CBE66648.1| CG11981-PA [Drosophila ananassae]
gi|269973444|emb|CBE66649.1| CG11981-PA [Drosophila ananassae]
gi|269973446|emb|CBE66650.1| CG11981-PA [Drosophila ananassae]
Length = 205
Score = 155 bits (391), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 72/128 (56%), Positives = 94/128 (73%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG +VAM GK+C AIA+D R GVQ QTI+TDF+++ I R+F+GL+GL TD
Sbjct: 1 MSILAYNGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVFHIAPRMFLGLTGLQTDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
T+ RL+FR LY+ RE R+M P+ F++++S+ LYE RFGPYF +PV+AGL KPF
Sbjct: 61 LTVRDRLMFRKNLYETRENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPHTLKPF 120
Query: 120 ICTMDSIG 127
IC MD IG
Sbjct: 121 ICNMDLIG 128
>gi|125778116|ref|XP_001359838.1| GA11308 [Drosophila pseudoobscura pseudoobscura]
gi|195157484|ref|XP_002019626.1| GL12496 [Drosophila persimilis]
gi|54639588|gb|EAL28990.1| GA11308 [Drosophila pseudoobscura pseudoobscura]
gi|194116217|gb|EDW38260.1| GL12496 [Drosophila persimilis]
Length = 205
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 71/128 (55%), Positives = 95/128 (74%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG +VAM GK+C AIA+D R GVQ QTI+TDF+++ I R+F+GL+GL TD
Sbjct: 1 MSILAYNGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVFHIAPRMFLGLTGLQTDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
T+ RL+FR LY+ RE R+M P+ F++++S+ LYE RFGPYF +PV+AGL + KPF
Sbjct: 61 LTVRDRLMFRKNLYETRENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPKTLKPF 120
Query: 120 ICTMDSIG 127
+C MD IG
Sbjct: 121 VCNMDLIG 128
>gi|71003984|ref|XP_756658.1| hypothetical protein UM00511.1 [Ustilago maydis 521]
gi|46095730|gb|EAK80963.1| hypothetical protein UM00511.1 [Ustilago maydis 521]
Length = 189
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 96/127 (75%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG ++VA GKNC IASD RLG Q T+A +F ++ ++ ++ ++GL GLA+D
Sbjct: 1 MSIMEYNGGSVVAAKGKNCVVIASDLRLGQQAMTVACNFDKVFRVTEKTYVGLPGLASDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
TL +R +R +Y+++EERD++PE FA+LVS+ LYE+RFGPYF +PVIAG++ +D+PFI
Sbjct: 61 ATLKERFRYRVNMYKMKEERDIEPEIFANLVSSTLYERRFGPYFIEPVIAGINSKDEPFI 120
Query: 121 CTMDSIG 127
D +G
Sbjct: 121 AASDVVG 127
>gi|427787219|gb|JAA59061.1| Putative 20s proteasome regulatory subunit beta type psmb3/pup3
[Rhipicephalus pulchellus]
Length = 205
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/128 (57%), Positives = 95/128 (74%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG +VAM GK C AIA+DRRLG + TIA DF+RI ++ +L+ GL GLATD+
Sbjct: 1 MSIMSYNGGVVVAMKGKECVAIAADRRLGARGHTIALDFERIFEMGPKLYCGLPGLATDT 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPF 119
QT+ QRL FR LY+LRE R + P+T S++S LLYE+RFGPYF QP++AGL ++P+
Sbjct: 61 QTVAQRLKFRINLYELREGRLITPKTLGSVISNLLYERRFGPYFVQPIVAGLDPVTNEPY 120
Query: 120 ICTMDSIG 127
IC MD IG
Sbjct: 121 ICVMDLIG 128
>gi|56755093|gb|AAW25726.1| SJCHGC01130 protein [Schistosoma japonicum]
Length = 184
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 69/128 (53%), Positives = 95/128 (74%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI +NGSA++ M GK+C AIA D R GV LQTI+TDF ++ + RL++G GLATD+
Sbjct: 1 MSILAHNGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVYSLGPRLYVGFPGLATDN 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPF 119
QT++QRL FR +Y+LRE R +KP+T +++S LLYE+RFGPYF +PV+AG+ KP+
Sbjct: 61 QTVFQRLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPY 120
Query: 120 ICTMDSIG 127
+ MD IG
Sbjct: 121 VACMDLIG 128
>gi|56755285|gb|AAW25822.1| unknown [Schistosoma japonicum]
Length = 190
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 69/128 (53%), Positives = 95/128 (74%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI +NGSA++ M GK+C AIA D R GV LQTI+TDF ++ + RL++G GLATD+
Sbjct: 1 MSILAHNGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVYSLGPRLYVGFPGLATDN 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPF 119
QT++QRL FR +Y+LRE R +KP+T +++S LLYE+RFGPYF +PV+AG+ KP+
Sbjct: 61 QTVFQRLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPY 120
Query: 120 ICTMDSIG 127
+ MD IG
Sbjct: 121 VACMDLIG 128
>gi|226478588|emb|CAX72789.1| proteasome (prosome, macropain) subunit, beta type 3 [Schistosoma
japonicum]
gi|226478710|emb|CAX72850.1| proteasome (prosome, macropain) subunit, beta type 3 [Schistosoma
japonicum]
gi|257206170|emb|CAX82736.1| proteasome (prosome, macropain) subunit, beta type 3 [Schistosoma
japonicum]
Length = 205
Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 69/128 (53%), Positives = 95/128 (74%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI +NGSA++ M GK+C AIA D R GV LQTI+TDF ++ + RL++G GLATD+
Sbjct: 1 MSILAHNGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVYSLGPRLYVGFPGLATDN 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPF 119
QT++QRL FR +Y+LRE R +KP+T +++S LLYE+RFGPYF +PV+AG+ KP+
Sbjct: 61 QTVFQRLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPY 120
Query: 120 ICTMDSIG 127
+ MD IG
Sbjct: 121 VACMDLIG 128
>gi|270008657|gb|EFA05105.1| hypothetical protein TcasGA2_TC015205 [Tribolium castaneum]
Length = 205
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 68/128 (53%), Positives = 96/128 (75%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A+VAM G C +IASD+R G+Q QTIAT+FQ+I ++ L++GL GLATD+
Sbjct: 1 MSILAYNGGAMVAMKGDKCVSIASDKRFGIQAQTIATNFQKIFEMGPHLYVGLPGLATDT 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ ++L FR LY+L+E R M P+ F++++S +LYE RFGP+F +P++AGL +P+
Sbjct: 61 QTVMEKLRFRKNLYELKENRPMSPKVFSAMLSNMLYENRFGPFFVEPIVAGLDPGTYEPY 120
Query: 120 ICTMDSIG 127
IC MD IG
Sbjct: 121 ICNMDLIG 128
>gi|29841419|gb|AAP06451.1| similar to NM_011971 proteasome (prosome, macropain) subunit, beta
type 3 in Mus musculus [Schistosoma japonicum]
Length = 209
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 69/128 (53%), Positives = 95/128 (74%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI +NGSA++ M GK+C AIA D R GV LQTI+TDF ++ + RL++G GLATD+
Sbjct: 1 MSILAHNGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVYSLGPRLYVGFPGLATDN 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPF 119
QT++QRL FR +Y+LRE R +KP+T +++S LLYE+RFGPYF +PV+AG+ KP+
Sbjct: 61 QTVFQRLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPY 120
Query: 120 ICTMDSIG 127
+ MD IG
Sbjct: 121 VACMDLIG 128
>gi|195444118|ref|XP_002069722.1| GK11424 [Drosophila willistoni]
gi|194165807|gb|EDW80708.1| GK11424 [Drosophila willistoni]
Length = 205
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/128 (55%), Positives = 94/128 (73%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG +VAM GK C AIA+D R GVQ QTI+TDF+++ I R+F+GL+GL TD
Sbjct: 1 MSILSYNGGCVVAMRGKECVAIATDHRFGVQAQTISTDFKKVFHIAPRMFLGLTGLQTDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
T+ RL+FR LY+ RE R+M P+ F++++S+ LYE RFGPYF +PV+AGL + +PF
Sbjct: 61 LTVRDRLMFRKNLYETRENREMAPKPFSAMLSSFLYEHRFGPYFVEPVVAGLHPKTLEPF 120
Query: 120 ICTMDSIG 127
IC MD IG
Sbjct: 121 ICNMDLIG 128
>gi|195395370|ref|XP_002056309.1| GJ10880 [Drosophila virilis]
gi|194143018|gb|EDW59421.1| GJ10880 [Drosophila virilis]
Length = 205
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 70/128 (54%), Positives = 95/128 (74%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG +VAM GK+C AIA+D R GVQ QTI+TDF+++ I R+F+GL+GL TD
Sbjct: 1 MSILAYNGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVFHIAPRMFLGLTGLQTDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
T+ RL+FR +Y+ +E R+M P+ F++++S+ LYE RFGPYF +PV+AGL + KPF
Sbjct: 61 LTVRDRLMFRKNIYETKENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPKTMKPF 120
Query: 120 ICTMDSIG 127
IC MD IG
Sbjct: 121 ICNMDLIG 128
>gi|195038067|ref|XP_001990482.1| GH18224 [Drosophila grimshawi]
gi|193894678|gb|EDV93544.1| GH18224 [Drosophila grimshawi]
Length = 205
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 70/128 (54%), Positives = 95/128 (74%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG +VAM GK+C AIA+D R GVQ QTI+TDF+++ I R+F+GL+GL TD
Sbjct: 1 MSILAYNGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVFHIAPRMFLGLTGLQTDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
T+ RL+FR +Y+ +E R+M P+ F++++S+ LYE RFGPYF +PV+AGL + KPF
Sbjct: 61 LTVRDRLMFRKNIYETKENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPKTMKPF 120
Query: 120 ICTMDSIG 127
IC MD IG
Sbjct: 121 ICNMDLIG 128
>gi|225710324|gb|ACO11008.1| Proteasome subunit beta type-3 [Caligus rogercresseyi]
Length = 205
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/132 (53%), Positives = 98/132 (74%), Gaps = 1/132 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MS+ NGSA+VAM GK+C AIASD R G L TI TDF + ++ L++GL+GLATD
Sbjct: 1 MSVFTINGSAVVAMKGKDCVAIASDLRFGSNLHTIMTDFPKTFEMGPGLYVGLAGLATDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-DEDKPF 119
QT++Q+L FR K+++LRE R M+P+TF+ ++S+LLYE+RFGP+F P++AG E+KPF
Sbjct: 61 QTVHQKLTFRKKMFELREGRQMRPKTFSEMLSSLLYERRFGPFFVNPIVAGYDYVENKPF 120
Query: 120 ICTMDSIGAKYV 131
I MD IGA +
Sbjct: 121 ISGMDLIGASTI 132
>gi|195111548|ref|XP_002000340.1| GI10178 [Drosophila mojavensis]
gi|193916934|gb|EDW15801.1| GI10178 [Drosophila mojavensis]
Length = 205
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 70/128 (54%), Positives = 95/128 (74%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG +VAM GK+C AIA+D R GVQ QTI+TDF+++ I R+F+GL+GL TD
Sbjct: 1 MSILAYNGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVFHIAPRMFLGLTGLQTDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
T+ RL+FR +Y+ +E R+M P+ F++++S+ LYE RFGPYF +PV+AGL + KPF
Sbjct: 61 LTVRDRLMFRKNIYETKENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPKTMKPF 120
Query: 120 ICTMDSIG 127
IC MD IG
Sbjct: 121 ICNMDLIG 128
>gi|225710512|gb|ACO11102.1| Proteasome subunit beta type-3 [Caligus rogercresseyi]
Length = 205
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/132 (53%), Positives = 98/132 (74%), Gaps = 1/132 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MS+ NGSA+VAM GK+C AIASD R G L TI TDF + ++ L++GL+GLATD
Sbjct: 1 MSVFTINGSAVVAMKGKDCVAIASDLRFGSNLHTIMTDFPKTFEMGPGLYVGLAGLATDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-DEDKPF 119
QT++Q+L FR K+++LRE R M+P+TF+ ++S+LLYE+RFGP+F P++AG E+KPF
Sbjct: 61 QTVHQKLTFRKKMFELREGRQMRPKTFSEMLSSLLYERRFGPFFVNPIVAGYDYVENKPF 120
Query: 120 ICTMDSIGAKYV 131
I MD IGA +
Sbjct: 121 ISGMDLIGASTI 132
>gi|27450761|gb|AAO14683.1|AF508264_1 beta 3 subunit of 20S proteasome [Pyrocystis lunula]
Length = 214
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/180 (46%), Positives = 114/180 (63%), Gaps = 9/180 (5%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGV-QLQTIATDFQRISKIHDRLFIGLSGLATDS 60
+ +YNGSA+VAM G C IASD R GV QLQT+ Q+ ++ D+ F+G++GLATD
Sbjct: 3 GLMDYNGSAIVAMAGDGCVGIASDTRYGVRQLQTVGCQRQKTFQLTDQTFVGIAGLATDV 62
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QT+ Q L FR KL+ LREER M+P+T +L+S++LYEKRFGPYF +PV+AGL + PF+
Sbjct: 63 QTMAQLLDFRIKLFSLREERTMQPQTVGNLISSILYEKRFGPYFTEPVVAGLDKDHNPFL 122
Query: 121 CTMDSIGAKYVGSLQKILLLLELLESLFMVPVRQCSSLIWNP-MSCLKLYLKLCYHLLTV 179
C D IGA + Q ++ E LF V C S W P M+ +L+ L LL+
Sbjct: 123 CAFDFIGA--MSKAQDFVVSGTSSEQLFGV----CESF-WRPKMNKDELFETLAQCLLSA 175
>gi|392577300|gb|EIW70429.1| hypothetical protein TREMEDRAFT_68051 [Tremella mesenterica DSM
1558]
Length = 210
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/133 (54%), Positives = 97/133 (72%), Gaps = 6/133 (4%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG ++VAM+GK+C AIASD RLG Q +A +F ++ ++D+L+ GL GLATD
Sbjct: 1 MSIMEYNGGSVVAMIGKDCVAIASDLRLGQQSVGVAMNFDKVFPVNDKLYYGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD------ 114
TL ++L FR +Y+++EER++ P+TF LVS+ LYEKRFGPYF +PV+AGL
Sbjct: 61 YTLREQLRFRVNMYRMKEEREITPKTFTHLVSSTLYEKRFGPYFIEPVVAGLPSPTELDP 120
Query: 115 EDKPFICTMDSIG 127
KPFI TMD+IG
Sbjct: 121 HPKPFISTMDTIG 133
>gi|148679117|gb|EDL11064.1| mCG13639 [Mus musculus]
Length = 205
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/163 (49%), Positives = 106/163 (65%), Gaps = 8/163 (4%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM KNC AIA+DRR G+Q Q + TDFQ+I + DRL++GL+GLA D
Sbjct: 1 MSIMSYNGGAVMAMKEKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYVGLAGLAIDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ QRL F LY+L+E +KP T S+V+ LLYEK FGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQRLKFLLNLYELKEGWQIKPYTLMSMVANLLYEKWFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKYVGSLQKILLLLELLESLFMVPVRQCSSLIWNP 162
IC++D IG V ++ E ++ R C SL W P
Sbjct: 121 ICSLDLIGCPMV--TDDFVVSGTCSEPMY----RMCESL-WEP 156
>gi|403374952|gb|EJY87444.1| Proteasome subunit beta type-3 [Oxytricha trifallax]
Length = 208
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/133 (56%), Positives = 96/133 (72%), Gaps = 4/133 (3%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI +YNG+++VAM GKNC AIA+D RL QL T+ T FQR+ K+ D+ +G+SGL TD
Sbjct: 1 MSIFDYNGNSMVAMSGKNCVAIATDTRLSTQLMTVDTSFQRVFKVTDQCLMGVSGLGTDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL---SD-ED 116
QT + F+ +Y+L+E R+MK ETF+ LV+ LYEKRFGPYF PV+AGL SD E
Sbjct: 61 QTFNSLMKFKLNMYRLKEGREMKSETFSKLVATSLYEKRFGPYFVSPVVAGLDKISDTEY 120
Query: 117 KPFICTMDSIGAK 129
KP ICT DSIG +
Sbjct: 121 KPVICTYDSIGYR 133
>gi|89272044|emb|CAJ83196.1| proteasome (prosome macropain) subunit beta type 3 [Xenopus
(Silurana) tropicalis]
Length = 194
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/117 (61%), Positives = 93/117 (79%), Gaps = 1/117 (0%)
Query: 12 VAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRH 71
+AM GK+C AIA+DRR GVQ Q + TDFQ+I + DRL+IGL+GLATD QT+ QRL FR
Sbjct: 1 MAMRGKDCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQRLKFRL 60
Query: 72 KLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIG 127
LY+L+E R +KP+TF S+V+ LLYE+RFGPY+ +PVIAGL + KPFIC++D IG
Sbjct: 61 NLYELKEGRQIKPKTFMSMVANLLYERRFGPYYIEPVIAGLDPKTFKPFICSLDLIG 117
>gi|390595223|gb|EIN04629.1| 20S proteasome subunit beta 3 [Punctularia strigosozonata HHB-11173
SS5]
Length = 224
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 88/113 (77%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI E NG ++VAMVGK+C AIASD RLG Q Q +A +FQ++ I DR+++GL GLATD
Sbjct: 1 MSIMETNGGSVVAMVGKDCVAIASDLRLGNQAQGLAANFQKVFSITDRIYLGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS 113
TLY+R FR +Y ++EER++ PETFA LVS+ LYE RFGPYF +PVIAG+S
Sbjct: 61 TTLYERFRFRTNMYTIKEEREISPETFAHLVSSTLYEHRFGPYFIEPVIAGIS 113
>gi|344249174|gb|EGW05278.1| Proteasome subunit beta type-3 [Cricetulus griseus]
Length = 194
Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/121 (60%), Positives = 92/121 (76%), Gaps = 1/121 (0%)
Query: 12 VAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRH 71
+AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD QT+ QRL FR
Sbjct: 1 MAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQRLKFRL 60
Query: 72 KLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKY 130
LY+L+E R +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPFIC++D IG
Sbjct: 61 NLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDLIGCPM 120
Query: 131 V 131
V
Sbjct: 121 V 121
>gi|213409155|ref|XP_002175348.1| 20S proteasome component beta 3 [Schizosaccharomyces japonicus
yFS275]
gi|212003395|gb|EEB09055.1| 20S proteasome component beta 3 [Schizosaccharomyces japonicus
yFS275]
Length = 204
Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 69/127 (54%), Positives = 96/127 (75%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG + +AMVGK C AIASD RLG Q ++ +F +I + ++ ++GL+GLATD
Sbjct: 1 MSIMEYNGGSCIAMVGKECVAIASDLRLGAQSVSLTNNFPKIFSMTEKTYLGLTGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTL++ ++ +Y+LREER ++P+TFA+LVS+ LYEKRF PYF P++AGLS ++PFI
Sbjct: 61 QTLHELFRYKINMYKLREERQIEPKTFANLVSSTLYEKRFAPYFTFPIVAGLSKTNEPFI 120
Query: 121 CTMDSIG 127
C DSIG
Sbjct: 121 CGFDSIG 127
>gi|402225130|gb|EJU05191.1| 20S proteasome subunit beta 3 [Dacryopinax sp. DJM-731 SS1]
Length = 205
Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 72/128 (56%), Positives = 95/128 (74%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG ++VAM GKNC AIASD RLG Q T+AT+F+++ + D L+ GL+GLATD
Sbjct: 1 MSIMEYNGGSVVAMKGKNCVAIASDLRLGNQAMTVATNFEKVFPVTDSLYCGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPF 119
TL +R +R +Y ++EER ++P TFA LVS+ LYE+RFGPYF +PVIAG+S + +PF
Sbjct: 61 ITLRERFRYRVNMYTIKEERQIEPATFAQLVSSTLYERRFGPYFVEPVIAGISKKTGEPF 120
Query: 120 ICTMDSIG 127
I D IG
Sbjct: 121 IAAADLIG 128
>gi|392597640|gb|EIW86962.1| 20S proteasome subunit beta 3 [Coniophora puteana RWD-64-598 SS2]
Length = 208
Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 71/131 (54%), Positives = 96/131 (73%), Gaps = 4/131 (3%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG +++AMVGK+C AIASD RLG Q I+++FQ++ + DR+++GL+GL TD
Sbjct: 1 MSIMEYNGGSVIAMVGKDCVAIASDLRLGNQALGISSNFQKVFPVTDRIYVGLAGLGTDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED---- 116
TL +R +R +Y ++EER+++PETFA LVS+ LYE RFGPYF +PV+AGLS
Sbjct: 61 ITLRERFRYRVNMYTIKEEREIEPETFAHLVSSTLYEHRFGPYFIEPVVAGLSKTPSGGL 120
Query: 117 KPFICTMDSIG 127
KPFI D IG
Sbjct: 121 KPFIAATDLIG 131
>gi|323508047|emb|CBQ67918.1| probable PUP3-20S proteasome subunit beta3 [Sporisorium reilianum
SRZ2]
Length = 204
Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 95/127 (74%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG ++VA GKNC IASD RLG Q T+A +F ++ ++ ++ ++GL GLA+D
Sbjct: 1 MSIMEYNGGSVVAAKGKNCVVIASDLRLGQQAMTVACNFDKVFRVTEKTYVGLPGLASDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
TL +R +R +Y+++EERD++PE FA LVS+ LYE+RFGPYF +PVIAG++ +++PFI
Sbjct: 61 ATLKERFRYRVNMYKMKEERDIEPEIFAHLVSSTLYERRFGPYFIEPVIAGINSKNEPFI 120
Query: 121 CTMDSIG 127
D +G
Sbjct: 121 AASDVVG 127
>gi|91084563|ref|XP_973600.1| PREDICTED: similar to proteasome beta 3 subunit [Tribolium
castaneum]
Length = 210
Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 67/127 (52%), Positives = 95/127 (74%), Gaps = 1/127 (0%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
SI YNG A+VAM G C +IASD+R G+Q QTIAT+FQ+I ++ L++GL GLATD+Q
Sbjct: 7 SILAYNGGAMVAMKGDKCVSIASDKRFGIQAQTIATNFQKIFEMGPHLYVGLPGLATDTQ 66
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFI 120
T+ ++L FR LY+L+E R M P+ F++++S +LYE RFGP+F +P++AGL +P+I
Sbjct: 67 TVMEKLRFRKNLYELKENRPMSPKVFSAMLSNMLYENRFGPFFVEPIVAGLDPGTYEPYI 126
Query: 121 CTMDSIG 127
C MD IG
Sbjct: 127 CNMDLIG 133
>gi|226478644|emb|CAX72817.1| proteasome (prosome, macropain) subunit, beta type 3 [Schistosoma
japonicum]
Length = 205
Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 68/128 (53%), Positives = 94/128 (73%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI +NGSA++ M GK+C AIA D R GV LQTI+TDF ++ + RL++G GLATD+
Sbjct: 1 MSILAHNGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVYSLGPRLYVGFPGLATDN 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPF 119
Q ++QRL FR +Y+LRE R +KP+T +++S LLYE+RFGPYF +PV+AG+ KP+
Sbjct: 61 QIVFQRLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPY 120
Query: 120 ICTMDSIG 127
+ MD IG
Sbjct: 121 VACMDLIG 128
>gi|21355629|ref|NP_649858.1| proteasome beta3 subunit [Drosophila melanogaster]
gi|194903499|ref|XP_001980880.1| GG17403 [Drosophila erecta]
gi|195330532|ref|XP_002031957.1| GM26292 [Drosophila sechellia]
gi|195499293|ref|XP_002096887.1| GE24806 [Drosophila yakuba]
gi|195572401|ref|XP_002104184.1| GD20828 [Drosophila simulans]
gi|17380236|sp|Q9XYN7.1|PSB3_DROME RecName: Full=Proteasome subunit beta type-3; AltName: Full=20S
proteasome subunit beta-3
gi|4559288|gb|AAD22968.1|AF116898_1 20S proteasome beta3 subunit [Drosophila melanogaster]
gi|7299121|gb|AAF54320.1| proteasome beta3 subunit [Drosophila melanogaster]
gi|20151995|gb|AAM11357.1| LD16402p [Drosophila melanogaster]
gi|116806244|emb|CAL26545.1| CG11981 [Drosophila melanogaster]
gi|116806246|emb|CAL26546.1| CG11981 [Drosophila melanogaster]
gi|116806248|emb|CAL26547.1| CG11981 [Drosophila melanogaster]
gi|116806250|emb|CAL26548.1| CG11981 [Drosophila melanogaster]
gi|116806252|emb|CAL26549.1| CG11981 [Drosophila melanogaster]
gi|116806254|emb|CAL26550.1| CG11981 [Drosophila melanogaster]
gi|116806256|emb|CAL26551.1| CG11981 [Drosophila melanogaster]
gi|116806258|emb|CAL26552.1| CG11981 [Drosophila melanogaster]
gi|116806260|emb|CAL26553.1| CG11981 [Drosophila simulans]
gi|190652583|gb|EDV49838.1| GG17403 [Drosophila erecta]
gi|194120900|gb|EDW42943.1| GM26292 [Drosophila sechellia]
gi|194182988|gb|EDW96599.1| GE24806 [Drosophila yakuba]
gi|194200111|gb|EDX13687.1| GD20828 [Drosophila simulans]
gi|220942808|gb|ACL83947.1| Prosbeta3-PA [synthetic construct]
gi|223967619|emb|CAR93540.1| CG11981-PA [Drosophila melanogaster]
gi|223967621|emb|CAR93541.1| CG11981-PA [Drosophila melanogaster]
gi|223967623|emb|CAR93542.1| CG11981-PA [Drosophila melanogaster]
gi|223967625|emb|CAR93543.1| CG11981-PA [Drosophila melanogaster]
gi|223967627|emb|CAR93544.1| CG11981-PA [Drosophila melanogaster]
gi|223967629|emb|CAR93545.1| CG11981-PA [Drosophila melanogaster]
gi|223967631|emb|CAR93546.1| CG11981-PA [Drosophila melanogaster]
gi|223967633|emb|CAR93547.1| CG11981-PA [Drosophila melanogaster]
gi|223967635|emb|CAR93548.1| CG11981-PA [Drosophila melanogaster]
gi|223967637|emb|CAR93549.1| CG11981-PA [Drosophila melanogaster]
gi|223967639|emb|CAR93550.1| CG11981-PA [Drosophila melanogaster]
Length = 205
Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 70/128 (54%), Positives = 95/128 (74%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG +VAM GK+C AIA+D R G+Q QTI+TDF+++ I R+F+GL+GL TD
Sbjct: 1 MSILAYNGGCVVAMRGKDCVAIATDHRFGIQAQTISTDFKKVFHIGPRMFLGLTGLQTDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
T+ RL+FR LY+ RE R+M P+ F++++S+ LYE RFGPYF +PV+AGL + +PF
Sbjct: 61 LTVRDRLMFRKNLYETRENREMCPKPFSAMMSSFLYEHRFGPYFIEPVVAGLDPKTMEPF 120
Query: 120 ICTMDSIG 127
IC MD IG
Sbjct: 121 ICNMDLIG 128
>gi|388852079|emb|CCF54255.1| probable PUP3-20S proteasome subunit beta3 [Ustilago hordei]
Length = 204
Score = 152 bits (383), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 95/127 (74%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG ++VA GKNC IASD RLG Q T+A +F ++ ++ ++ +IGL GLA+D
Sbjct: 1 MSIMEYNGGSVVAAKGKNCVVIASDLRLGQQAMTVACNFDKVFRVTEKTYIGLPGLASDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
TL ++ +R +Y+++EERD++PE FA LVS+ LYE+RFGPYF +PVIAG++ +++PFI
Sbjct: 61 TTLREKFRYRVNMYKMKEERDIEPEVFAQLVSSTLYERRFGPYFIEPVIAGINSKNEPFI 120
Query: 121 CTMDSIG 127
D +G
Sbjct: 121 AASDVVG 127
>gi|336376544|gb|EGO04879.1| hypothetical protein SERLA73DRAFT_173986 [Serpula lacrymans var.
lacrymans S7.3]
gi|336389555|gb|EGO30698.1| hypothetical protein SERLADRAFT_454981 [Serpula lacrymans var.
lacrymans S7.9]
Length = 208
Score = 152 bits (383), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 71/131 (54%), Positives = 95/131 (72%), Gaps = 4/131 (3%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG +++AMVGK+C AIASD RLG Q +I+++FQ++ + DR+++GL GL TD
Sbjct: 1 MSIMEYNGGSVIAMVGKDCVAIASDLRLGNQALSISSNFQKVFPVTDRIYVGLPGLGTDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED---- 116
TL +R +R +Y ++EER+++PETFA LVS+ LYE RFGPYF +PVIAGLS
Sbjct: 61 TTLRERFRYRINMYTIKEEREIEPETFAHLVSSTLYEHRFGPYFIEPVIAGLSKTPSGGV 120
Query: 117 KPFICTMDSIG 127
KP I D IG
Sbjct: 121 KPLIAAADLIG 131
>gi|308799609|ref|XP_003074585.1| proteasome beta subunit (ISS) [Ostreococcus tauri]
gi|116000756|emb|CAL50436.1| proteasome beta subunit (ISS) [Ostreococcus tauri]
Length = 203
Score = 151 bits (382), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 75/140 (53%), Positives = 100/140 (71%), Gaps = 3/140 (2%)
Query: 12 VAMVGKNCFAIASDRRLGV-QLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFR 70
VAMVGK+C AIASD RLG+ Q QT A D+ ++ KIHD+L++GL+GL D TL Q+L F+
Sbjct: 10 VAMVGKDCVAIASDLRLGINQNQTTAVDYSKLHKIHDKLWLGLTGLIADQLTLAQKLRFK 69
Query: 71 HKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKY 130
H +Y+LRE R M P+ FAS+VS LYEKRF PY+ +PV+AGL + KP+I +MD IGA
Sbjct: 70 HDMYELRENRVMSPKVFASVVSTTLYEKRFQPYYTEPVVAGLDKDGKPYITSMDLIGAD- 128
Query: 131 VGSLQKILLLLELLESLFMV 150
S ++ + +ESLF V
Sbjct: 129 -ASADDFVVAGDNVESLFGV 147
>gi|443927308|gb|ELU45815.1| 20S proteasome subunit beta 3 [Rhizoctonia solani AG-1 IA]
Length = 415
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/129 (55%), Positives = 96/129 (74%), Gaps = 2/129 (1%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI + NG +++AM GKNC AIASD RLG Q T+A +F++I + DRL++GL GLATD
Sbjct: 1 MSIMQLNGGSVIAMAGKNCVAIASDLRLGNQALTVACNFEKIFPVTDRLYVGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS--DEDKP 118
TL +RL FR +Y ++EER+++P+ FA LVS+ LYE+RFGP+F +PVIAGL+ + KP
Sbjct: 61 LTLRERLRFRVNMYTMKEEREIQPKAFAHLVSSTLYERRFGPFFIEPVIAGLTPGPDPKP 120
Query: 119 FICTMDSIG 127
FI D IG
Sbjct: 121 FIAATDLIG 129
>gi|302683915|ref|XP_003031638.1| hypothetical protein SCHCODRAFT_15691 [Schizophyllum commune H4-8]
gi|300105331|gb|EFI96735.1| hypothetical protein SCHCODRAFT_15691 [Schizophyllum commune H4-8]
Length = 208
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 107/166 (64%), Gaps = 11/166 (6%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG +++AMVGK+C AIASD RLG Q Q I+T F++I + DR ++GL+GLA+D
Sbjct: 1 MSIMEYNGGSVIAMVGKDCVAIASDLRLGNQAQGISTHFEKIFPVTDRTYVGLAGLASDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL----SDED 116
TL ++ FR +Y ++EER+++PETFA L S+ LYE RFGPYF +PVIAG+ S
Sbjct: 61 LTLREKFRFRVNMYTIKEEREIQPETFAHLASSTLYEHRFGPYFIEPVIAGMQKTPSGGY 120
Query: 117 KPFICTMDSIGAKYVGSLQKILLLLELLESLFMVPVRQCSSLIWNP 162
KPFI D IG + + +L E LF V + +W P
Sbjct: 121 KPFIAAADLIGC--LNFAKDFVLAGTASEKLFGV-----AESLWEP 159
>gi|225719470|gb|ACO15581.1| Proteasome subunit beta type-3 [Caligus clemensi]
Length = 205
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/132 (53%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MS+ NGSA+VAM GK+C IASD R G TI TDF + ++ L++GL+GLATD
Sbjct: 1 MSVFSINGSAVVAMKGKDCVGIASDLRFGSDRHTIMTDFPKTFEMGAGLYVGLAGLATDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-DEDKPF 119
QT++Q+L FR K+++LRE R M+P+TF+ ++S+LLYE+RFGP+F PV+AG E+KPF
Sbjct: 61 QTVHQKLNFRKKMFELREGRQMRPKTFSEMLSSLLYERRFGPFFVNPVVAGWDFVENKPF 120
Query: 120 ICTMDSIGAKYV 131
I +MD IGA V
Sbjct: 121 ISSMDLIGAMTV 132
>gi|442750507|gb|JAA67413.1| Putative 20s proteasome regulatory subunit beta type psmb3/pup3
[Ixodes ricinus]
Length = 205
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/128 (57%), Positives = 96/128 (75%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG ++AM GK C AIA+DRRLG + TIA DFQRI ++ +L+ GLSGLATD
Sbjct: 1 MSIMSYNGGVVIAMKGKECIAIAADRRLGARGHTIALDFQRIFEMGPKLYCGLSGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPF 119
QT+ QRL FR +Y+LRE R +KP+TF+S+VS +LYE+RFGPYF + +IAGL ++P+
Sbjct: 61 QTVAQRLKFRINMYELREGRRIKPKTFSSVVSNILYERRFGPYFTEALIAGLDPITNEPY 120
Query: 120 ICTMDSIG 127
I + D IG
Sbjct: 121 IASTDLIG 128
>gi|242217207|ref|XP_002474405.1| predicted protein [Postia placenta Mad-698-R]
gi|220726447|gb|EED80396.1| predicted protein [Postia placenta Mad-698-R]
Length = 208
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/131 (54%), Positives = 97/131 (74%), Gaps = 4/131 (3%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG +++AMVGK+C AIASD RLG Q IA+DF++I + DR+++GL GLATD
Sbjct: 1 MSIMEYNGGSVIAMVGKDCVAIASDLRLGNQALGIASDFEKIFPMTDRVYLGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL----SDED 116
TL ++ +R +Y ++EER+++PETFA LVS+ LYE+RFGPYF +PV+AGL +
Sbjct: 61 TTLREQFRYRLNMYTIKEEREIEPETFAHLVSSTLYERRFGPYFIEPVMAGLQRLPNGGY 120
Query: 117 KPFICTMDSIG 127
KPFI D IG
Sbjct: 121 KPFIAATDLIG 131
>gi|389742559|gb|EIM83745.1| 20S proteasome subunit beta 3 [Stereum hirsutum FP-91666 SS1]
Length = 213
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/136 (53%), Positives = 98/136 (72%), Gaps = 9/136 (6%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI +YNG ++VAMVGK+C AIASD RLG Q T+AT+F+++ + DR+++GL GLATD
Sbjct: 1 MSIMQYNGGSVVAMVGKDCVAIASDLRLGNQALTVATNFEKVFPVTDRIYLGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL------SD 114
TL +R FR +Y ++E R+++P TFA LVS+ LYE RFGPYF +PVIAGL +D
Sbjct: 61 TTLRERFRFRVNMYTIKESREIQPSTFAHLVSSTLYEHRFGPYFIEPVIAGLERLPTSTD 120
Query: 115 ED---KPFICTMDSIG 127
E+ +PFI D IG
Sbjct: 121 EEPKFEPFIAATDLIG 136
>gi|412992168|emb|CCO19881.1| predicted protein [Bathycoccus prasinos]
Length = 209
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/139 (55%), Positives = 94/139 (67%), Gaps = 3/139 (2%)
Query: 13 AMVGKNCFAIASDRRLGV-QLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRH 71
AM G C AIASD RLG+ Q QT A DFQ+I +IH RLF+ +SGLA+D TL F+H
Sbjct: 17 AMCGHECVAIASDNRLGINQQQTTAIDFQKIFQIHPRLFLAMSGLASDMHTLKATFEFKH 76
Query: 72 KLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKYV 131
KLY+LRE R M+P+TFAS+VS LYEKRFGPY+ +PVIAGL KP+I MD IGA
Sbjct: 77 KLYELRENRVMEPKTFASVVSTTLYEKRFGPYYVEPVIAGLDKASKPYITGMDLIGA--A 134
Query: 132 GSLQKILLLLELLESLFMV 150
+ ++ ESLF V
Sbjct: 135 APTENFVVAGNNSESLFGV 153
>gi|409083718|gb|EKM84075.1| hypothetical protein AGABI1DRAFT_110664 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426201222|gb|EKV51145.1| 20S proteasome subunit beta 3 [Agaricus bisporus var. bisporus H97]
Length = 208
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/131 (53%), Positives = 93/131 (70%), Gaps = 4/131 (3%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG +++AM GK+C AIASD RLG Q+ +I+++FQR+ + DR++IGL GLATD
Sbjct: 1 MSIMEYNGGSVIAMAGKDCVAIASDLRLGNQMLSISSNFQRVFPVTDRIYIGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED---- 116
TL +R R +Y ++EER+++PE F LVS+ LYE RFGPYF PV+AG+S
Sbjct: 61 TTLRERFRLRVNMYTIKEEREIEPEAFTHLVSSTLYEHRFGPYFISPVVAGISKTPTGGI 120
Query: 117 KPFICTMDSIG 127
KPFI D IG
Sbjct: 121 KPFIAATDLIG 131
>gi|313228966|emb|CBY18118.1| unnamed protein product [Oikopleura dioica]
Length = 203
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 66/124 (53%), Positives = 90/124 (72%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+YNG ++V M G NC IASD R G QL TI+TDF +I KI D++FIGLSGLATD QT+
Sbjct: 4 QYNGGSIVGMSGDNCVCIASDNRYGQQLHTISTDFPKIFKITDKIFIGLSGLATDIQTVL 63
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
++ ++ +Y+LRE R M P+ F ++VS LLYE+RFGP+F +PVI L+D+ +C MD
Sbjct: 64 NKIKYKVNMYELRENRKMSPKCFKTMVSNLLYERRFGPFFAEPVIVALNDDGTTMLCGMD 123
Query: 125 SIGA 128
+GA
Sbjct: 124 CLGA 127
>gi|392562504|gb|EIW55684.1| N-terminal nucleophile aminohydrolase [Trametes versicolor
FP-101664 SS1]
Length = 208
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/131 (55%), Positives = 95/131 (72%), Gaps = 4/131 (3%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG +++AMVGK C AIASD RLG Q I+++FQ+I + DR+++GL GLATD
Sbjct: 1 MSIMEYNGGSVIAMVGKECVAIASDLRLGNQALGISSNFQKIFPMSDRIYLGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL----SDED 116
TL + +R +Y ++EER+++PETFA LVS+ LYEKRFGPYF +PV+AGL S
Sbjct: 61 TTLKEVFRYRVNMYTIKEEREIEPETFAHLVSSTLYEKRFGPYFIEPVMAGLEKTPSGAY 120
Query: 117 KPFICTMDSIG 127
KPFI D IG
Sbjct: 121 KPFIAATDLIG 131
>gi|300120261|emb|CBK19815.2| unnamed protein product [Blastocystis hominis]
Length = 205
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 67/127 (52%), Positives = 89/127 (70%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
I YNG+A++AM GKNC AIASD RLG Q QT+ +FQ+I K+ D++FIG +GL +D+Q
Sbjct: 3 DIMSYNGAAVIAMKGKNCVAIASDLRLGAQFQTVDCNFQKIYKMTDQIFIGFNGLQSDAQ 62
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
T Q L + Y+LRE RD+ PE F SLV Y+ R+GPYF +PVIAGL +P++
Sbjct: 63 TFAQLLTYEVNSYKLRENRDISPEAFGSLVRTKQYQHRWGPYFVEPVIAGLDKNGEPYVN 122
Query: 122 TMDSIGA 128
MD+IGA
Sbjct: 123 AMDTIGA 129
>gi|391339684|ref|XP_003744177.1| PREDICTED: proteasome subunit beta type-3-like [Metaseiulus
occidentalis]
Length = 205
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 68/129 (52%), Positives = 97/129 (75%), Gaps = 1/129 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG ++AM G C AIA+DRRLGV+ +T++ DF+R+ ++ RLF+GL GLATD+
Sbjct: 1 MSILAYNGGIVIAMKGDGCVAIATDRRLGVEGRTVSIDFERVFEMGPRLFVGLPGLATDT 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPF 119
T+ Q+L F LY+L+E R M P+TFA+L+S LYEKRFGPYF +PV+AG+ + ++P+
Sbjct: 61 ITVSQKLRFDMNLYELQENRQMTPKTFATLLSGTLYEKRFGPYFIEPVVAGMDPKTNEPY 120
Query: 120 ICTMDSIGA 128
+ MD IG+
Sbjct: 121 VACMDLIGS 129
>gi|340506918|gb|EGR32962.1| hypothetical protein IMG5_065490 [Ichthyophthirius multifiliis]
Length = 220
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 69/138 (50%), Positives = 92/138 (66%), Gaps = 15/138 (10%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTL- 63
EYNG A++ M G C AI+ DRRLG Q QT+A +FQ++ KI D + +GL+GLATD QTL
Sbjct: 6 EYNGGAMIGMKGNGCVAISCDRRLGAQFQTVACNFQKVFKIQDNILLGLTGLATDVQTLQ 65
Query: 64 --------------YQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVI 109
++++ F+ LY+LRE RDMK ETF +L+SA LYEKR+GPYF QP++
Sbjct: 66 IKKNIQILNQFLKSHRQMEFKVNLYRLRENRDMKVETFINLISAALYEKRWGPYFVQPIV 125
Query: 110 AGLSDEDKPFICTMDSIG 127
GL D P + + DSIG
Sbjct: 126 IGLEDGKTPMVASYDSIG 143
>gi|406701627|gb|EKD04743.1| proteasome subunit beta type 3 [Trichosporon asahii var. asahii CBS
8904]
Length = 210
Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 68/133 (51%), Positives = 97/133 (72%), Gaps = 6/133 (4%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG ++VAMVGK+C AIA D RLG Q +A +F+++ ++D L+ GL GLATD
Sbjct: 1 MSIMEYNGGSVVAMVGKDCVAIAGDLRLGQQATGVAMNFEKVFPVNDTLYFGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS------D 114
TL +++ FR +Y+++EER++ P TF +L+S+ LYEKRFGPYF +PV+AG++
Sbjct: 61 FTLKEQMRFRVNMYRMKEEREITPVTFTNLLSSTLYEKRFGPYFIEPVVAGIAPATEANP 120
Query: 115 EDKPFICTMDSIG 127
+PFI TMD+IG
Sbjct: 121 NPQPFISTMDTIG 133
>gi|17535357|ref|NP_494913.1| Protein PBS-3 [Caenorhabditis elegans]
gi|17380195|sp|Q23237.1|PSB3_CAEEL RecName: Full=Proteasome subunit beta type-3; Short=Proteasome
subunit beta 3
gi|351050990|emb|CCD73694.1| Protein PBS-3 [Caenorhabditis elegans]
Length = 204
Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 94/127 (74%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI Y G +VAM G C IASD R+G Q+ TIATD +++ K+ D++++GL+G +D+
Sbjct: 1 MSIMSYTGGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
+T+ ++++FR LY+LRE R++KP+ + ++S L Y+ RFG YF +P++AGL D +KP+I
Sbjct: 61 RTVLEKIMFRKNLYELRENRNIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKPYI 120
Query: 121 CTMDSIG 127
C MD+IG
Sbjct: 121 CCMDTIG 127
>gi|164660346|ref|XP_001731296.1| hypothetical protein MGL_1479 [Malassezia globosa CBS 7966]
gi|159105196|gb|EDP44082.1| hypothetical protein MGL_1479 [Malassezia globosa CBS 7966]
Length = 201
Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 93/123 (75%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
EYNG +++AM GKNC AIASD RLG Q ++T F ++ ++ DR ++GL GLATD TL
Sbjct: 2 EYNGGSVIAMTGKNCVAIASDLRLGNQALLLSTQFDKVFRMTDRTYVGLPGLATDVATLR 61
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
++ +R +Y+++E+RD++PETFA L+S+ LYE+RFGPYF +PV+AG++ ++PFI D
Sbjct: 62 EKFRYRLNMYRMKEDRDIEPETFAKLMSSTLYERRFGPYFIEPVVAGMNSNNEPFIAASD 121
Query: 125 SIG 127
IG
Sbjct: 122 LIG 124
>gi|409043787|gb|EKM53269.1| hypothetical protein PHACADRAFT_259498 [Phanerochaete carnosa
HHB-10118-sp]
Length = 208
Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 96/131 (73%), Gaps = 4/131 (3%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI ++NG +++AMVGK+C AIASD RLGVQ +I +DF++I + DRLF+GL GLATD
Sbjct: 1 MSIMQHNGGSVIAMVGKDCVAIASDLRLGVQSLSITSDFEKIFPVTDRLFVGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED---- 116
TL ++ +R +Y ++EER+++P+TFA LVS+ LYE+RFGPYF +PV+AG+
Sbjct: 61 TTLREQFRYRVNMYTIKEEREIEPQTFAQLVSSTLYERRFGPYFIEPVMAGMQKTPAGGY 120
Query: 117 KPFICTMDSIG 127
PFI D IG
Sbjct: 121 APFIAATDLIG 131
>gi|299756258|ref|XP_002912180.1| proteasome subunit beta type 3 [Coprinopsis cinerea okayama7#130]
gi|298411595|gb|EFI28686.1| proteasome subunit beta type 3 [Coprinopsis cinerea okayama7#130]
Length = 205
Score = 148 bits (374), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 68/127 (53%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
++NG +++AM+GK+C AIASD RLG Q IA+DFQR+ + DR+++GL GLATD TL+
Sbjct: 2 DHNGGSVIAMLGKDCVAIASDLRLGNQALGIASDFQRVFPMTDRIYLGLPGLATDVATLH 61
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED----KPFI 120
+R FR +Y ++E R+++PE FA LVS+ LYE+RFGPYFC+PV+AG+S KPFI
Sbjct: 62 ERFRFRVNMYTIKEGREIEPEVFAHLVSSTLYERRFGPYFCEPVMAGISKTPTGKIKPFI 121
Query: 121 CTMDSIG 127
D IG
Sbjct: 122 AATDLIG 128
>gi|449545308|gb|EMD36279.1| 20S proteasome subunit beta 3 [Ceriporiopsis subvermispora B]
Length = 208
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/131 (54%), Positives = 97/131 (74%), Gaps = 4/131 (3%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI + NG +++AMVGK+C AIASD RLG Q I++ F++I + DR+++GL GLATD
Sbjct: 1 MSIMQMNGGSVIAMVGKDCVAIASDLRLGNQSLGISSKFEKIFPMTDRVYVGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL----SDED 116
TL+Q+ +R +Y ++EER+++PETFA LVS+ LYEKRFGPYF +PVIAGL S +
Sbjct: 61 TTLHQQFRYRLNMYTIKEEREIEPETFAHLVSSTLYEKRFGPYFIEPVIAGLQKTPSGDL 120
Query: 117 KPFICTMDSIG 127
KP+I D IG
Sbjct: 121 KPYIAATDLIG 131
>gi|82802844|gb|ABB92466.1| rcPSMB3 [Gorilla gorilla]
Length = 204
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/132 (55%), Positives = 93/132 (70%), Gaps = 1/132 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DR G+Q Q + TDFQ I + L+IGL+GLATD
Sbjct: 1 MSIMSYNGGAIMAMKGKNCVAIAADRHFGIQAQMVTTDFQEIFPMGGWLYIGLAGLATDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ Q L FR LY+L+E + +KP TF S+V+ LYEK FGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQCLKFRLNLYELKEGQQIKPYTFTSMVANPLYEKHFGPYYTEPVIAGLDLKTFKPF 120
Query: 120 ICTMDSIGAKYV 131
C++D IG V
Sbjct: 121 SCSLDLIGCPMV 132
>gi|341897730|gb|EGT53665.1| hypothetical protein CAEBREN_01834 [Caenorhabditis brenneri]
Length = 204
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 93/127 (73%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI Y G +VAM G C IASD R+G Q+ TIATD +++ K+ D++++GL+G +D+
Sbjct: 1 MSIMSYTGGTIVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
+T+ ++++FR LY+LRE R +KP+ + ++S L Y+ RFG YF +P++AGL D +KP+I
Sbjct: 61 RTVLEKIMFRKNLYELRENRRIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKPYI 120
Query: 121 CTMDSIG 127
C MD+IG
Sbjct: 121 CCMDTIG 127
>gi|308493735|ref|XP_003109057.1| CRE-PBS-3 protein [Caenorhabditis remanei]
gi|308247614|gb|EFO91566.1| CRE-PBS-3 protein [Caenorhabditis remanei]
Length = 204
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 93/127 (73%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI Y G +VAM G C IASD R+G Q+ TIATD +++ K+ D++++GL+G +D+
Sbjct: 1 MSIMSYTGGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
+T+ ++++FR LY+LRE R +KP+ + ++S L Y+ RFG YF +P++AGL D +KP+I
Sbjct: 61 RTVLEKIMFRKNLYELRENRRIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDSNKPYI 120
Query: 121 CTMDSIG 127
C MD+IG
Sbjct: 121 CCMDTIG 127
>gi|268530996|ref|XP_002630624.1| C. briggsae CBR-PBS-3 protein [Caenorhabditis briggsae]
Length = 204
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 93/127 (73%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI Y G +VAM G C IASD R+G Q+ TIATD +++ K+ D++++GL+G +D+
Sbjct: 1 MSIMSYTGGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
+T+ ++++FR LY+LRE R +KP+ + ++S L Y+ RFG YF +P++AGL D +KP+I
Sbjct: 61 RTVLEKIMFRKNLYELRENRRIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKPYI 120
Query: 121 CTMDSIG 127
C MD+IG
Sbjct: 121 CCMDTIG 127
>gi|331245973|ref|XP_003335621.1| proteasome component PUP3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309314611|gb|EFP91202.1| proteasome component PUP3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 204
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/129 (53%), Positives = 98/129 (75%), Gaps = 4/129 (3%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI E NG ++VAMVGK C AIA D RLG Q T+A +F+++ ++ D++FIGL GLATD+
Sbjct: 1 MSIMELNGGSVVAMVGKGCVAIACDLRLGNQALTVACNFEKVFQVTDKMFIGLPGLATDT 60
Query: 61 QTLYQRLVFRHK--LYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKP 118
TL + VFRH+ +Y+++EER ++P+T A L+S+ LY+KRFGPYF +PV+AGL +++P
Sbjct: 61 FTL--KNVFRHRVNMYKMKEERVIEPQTMAHLISSTLYQKRFGPYFVEPVVAGLDSKNEP 118
Query: 119 FICTMDSIG 127
FI D IG
Sbjct: 119 FIAATDLIG 127
>gi|341885035|gb|EGT40970.1| hypothetical protein CAEBREN_25310 [Caenorhabditis brenneri]
Length = 223
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 104/153 (67%), Gaps = 7/153 (4%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI Y G +VAM G C IASD R+G Q+ TIATD +++ K+ D++++GL+G +D+
Sbjct: 1 MSIMSYTGGTIVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
+T+ ++++FR LY+LRE R +KP+ + ++S L Y+ RFG YF +P++AGL D +KP+I
Sbjct: 61 RTVLEKIMFRKNLYELRENRRIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKPYI 120
Query: 121 CTMDSIGA-------KYVGSLQKILLLLELLES 146
C MD+IG VG+ Q+ LL + +ES
Sbjct: 121 CCMDTIGCVSAPRDFVAVGTGQEYLLGVCEMES 153
>gi|34859236|ref|XP_215842.2| PREDICTED: proteasome subunit beta type-3-like [Rattus norvegicus]
gi|109470850|ref|XP_001081206.1| PREDICTED: proteasome subunit beta type-3-like [Rattus norvegicus]
Length = 205
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/132 (54%), Positives = 92/132 (69%), Gaps = 1/132 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A+ A GKNC AIA+DR +Q Q + TDFQ+I + RL+I L+GL TD
Sbjct: 1 MSIMSYNGGAITATKGKNCVAIAADRHFRIQAQMVTTDFQKIFPMGYRLYIDLAGLGTDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ Q L FR LY+L+E + +KP T S+V+ LLYEKRFGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQHLKFRLNLYELKEGQQIKPYTLLSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120
Query: 120 ICTMDSIGAKYV 131
IC++D IG V
Sbjct: 121 ICSLDLIGCSMV 132
>gi|345497131|ref|XP_003427914.1| PREDICTED: proteasome subunit beta type-3-like isoform 2 [Nasonia
vitripennis]
Length = 192
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/115 (58%), Positives = 89/115 (77%), Gaps = 1/115 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
M GKNC AIA+DRR G+Q QTI+ +FQ+I ++ L++GL GLATDSQT+ +RL FR L
Sbjct: 1 MKGKNCVAIAADRRFGIQAQTISCNFQKIYEMGPHLYLGLPGLATDSQTVMERLRFRLNL 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIG 127
Y+L+E R + P+TF S++S LLYE+RFGPYF +P++AGL E +PFIC MD IG
Sbjct: 61 YELKESRTIHPKTFGSMISNLLYERRFGPYFVEPIVAGLDPETFEPFICNMDLIG 115
>gi|241957591|ref|XP_002421515.1| macropain subunit, putative; multicatalytic endopeptidase complex
subunit, putative; proteasome component, putative
[Candida dubliniensis CD36]
gi|223644859|emb|CAX40854.1| macropain subunit, putative [Candida dubliniensis CD36]
Length = 206
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/122 (55%), Positives = 92/122 (75%), Gaps = 1/122 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAM+GK+C AIASD RLG Q ++ +F++I + D+ F+GL+GLATD TL +
Sbjct: 8 NGGAAVAMIGKDCIAIASDLRLGQQSLGVSNNFEKIFSVGDKTFLGLTGLATDVITLKEL 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
F+ LY+LREER+++P T A+LVS+ LYE+RFGP+F P++AGLS +D KPFIC DS
Sbjct: 68 FRFKTNLYKLREERNIEPSTLANLVSSSLYERRFGPWFVSPIVAGLSSKDNKPFICGFDS 127
Query: 126 IG 127
IG
Sbjct: 128 IG 129
>gi|449690724|ref|XP_002160822.2| PREDICTED: proteasome subunit beta type-3-like, partial [Hydra
magnipapillata]
Length = 196
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/128 (54%), Positives = 95/128 (74%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MS+ NGSALVAM GKNC AIA+DRR GVQ QTIA DF++ ++ D+LF+GLSGLATD
Sbjct: 1 MSVMSINGSALVAMKGKNCVAIAADRRYGVQFQTIACDFEKTFQMGDKLFLGLSGLATDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPF 119
QT+ F+ LY+LRE R + P+ F +++S +LY +RFGPYF +P+IAGL + ++P+
Sbjct: 61 QTVNCFFFFKTNLYELRENRKISPKVFMTIMSNILYGRRFGPYFVEPLIAGLHPKTNEPY 120
Query: 120 ICTMDSIG 127
I + D IG
Sbjct: 121 IASCDLIG 128
>gi|344299526|gb|EGW29879.1| hypothetical protein SPAPADRAFT_63501 [Spathaspora passalidarum
NRRL Y-27907]
Length = 206
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/122 (56%), Positives = 90/122 (73%), Gaps = 1/122 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG + VAMVGK+C AIASD RLG Q ++ +F++I D+ F+GL+GLATD TL +
Sbjct: 8 NGGSAVAMVGKDCIAIASDLRLGNQSLGVSNNFEKIFGFGDKCFLGLTGLATDVLTLKET 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
F+ LY+LREER ++PET A+LVS+ LYE+RFGPYF P++AGL +D KPFIC DS
Sbjct: 68 FRFKTNLYKLREERSIEPETLANLVSSTLYERRFGPYFVSPIVAGLGHKDNKPFICGFDS 127
Query: 126 IG 127
IG
Sbjct: 128 IG 129
>gi|82802842|gb|ABB92465.1| rcPSMB3 [Pan troglodytes]
Length = 204
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/132 (55%), Positives = 93/132 (70%), Gaps = 1/132 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DR +Q Q + TDFQ I + L+IGL+GLATD
Sbjct: 1 MSIMSYNGGAIMAMKGKNCVAIAADRHFRIQAQMVTTDFQEIFPMGGWLYIGLAGLATDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
QT+ Q L FR LY+L+E + +KP TF S+V+ LLYEK FGPY+ +PVIAGL + KPF
Sbjct: 61 QTVAQCLKFRLNLYELKEGQQIKPYTFTSMVANLLYEKHFGPYYTEPVIAGLDLKTFKPF 120
Query: 120 ICTMDSIGAKYV 131
C++D IG V
Sbjct: 121 RCSLDLIGCPMV 132
>gi|294929626|ref|XP_002779296.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
gi|239888359|gb|EER11091.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
Length = 444
Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 67/129 (51%), Positives = 94/129 (72%), Gaps = 1/129 (0%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGV-QLQTIATDFQRISKIHDRLFIGLSGLATDS 60
+I EYNG +++AM G+ C IA DRR GV QLQT++ + Q++ + R +G GLATDS
Sbjct: 241 NIMEYNGGSVIAMKGEGCVGIACDRRYGVNQLQTVSANMQKVYPMTSRCLVGFQGLATDS 300
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTL Q L FR KLY+L+E+R+M + + L++ +LYEKRFGPYFC+PVIAGL ++ +PFI
Sbjct: 301 QTLSQLLKFRLKLYKLKEDREMPCDVVSHLMATMLYEKRFGPYFCEPVIAGLKNDGEPFI 360
Query: 121 CTMDSIGAK 129
+ D IG +
Sbjct: 361 SSFDLIGTE 369
>gi|448107066|ref|XP_004200900.1| Piso0_003510 [Millerozyma farinosa CBS 7064]
gi|448110074|ref|XP_004201531.1| Piso0_003510 [Millerozyma farinosa CBS 7064]
gi|359382322|emb|CCE81159.1| Piso0_003510 [Millerozyma farinosa CBS 7064]
gi|359383087|emb|CCE80394.1| Piso0_003510 [Millerozyma farinosa CBS 7064]
Length = 206
Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 69/122 (56%), Positives = 91/122 (74%), Gaps = 1/122 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG + VAMVGK+C AIASD RLG Q ++ +F++I + D+ F+GL+GLATD TL +
Sbjct: 8 NGGSAVAMVGKDCVAIASDLRLGNQSLGLSNNFEKIFQFGDKTFLGLTGLATDVITLSEV 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDK-PFICTMDS 125
F+H LY+LREERD++P+T A+LVS+ LYEKRFGPYF P++AGL + PFIC DS
Sbjct: 68 FRFKHNLYKLREERDIEPKTLANLVSSTLYEKRFGPYFVSPLVAGLDPKSNVPFICGFDS 127
Query: 126 IG 127
IG
Sbjct: 128 IG 129
>gi|321249095|ref|XP_003191339.1| proteasome subunit beta type 3 [Cryptococcus gattii WM276]
gi|317457806|gb|ADV19552.1| Proteasome subunit beta type 3, putative [Cryptococcus gattii
WM276]
Length = 210
Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 69/133 (51%), Positives = 96/133 (72%), Gaps = 6/133 (4%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MS+ E NG ++VAM+GK+C AIASD RLG Q IA +F ++ I+D+L+ GL GLATD
Sbjct: 1 MSVMELNGGSVVAMIGKDCVAIASDLRLGNQQVGIAANFDKVFPINDKLYCGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS------D 114
TL + L FR +Y+++EER++ P+TF L+S+ LYEKRFGP+F +PV+AGL+
Sbjct: 61 YTLREHLRFRVNMYRMKEEREITPKTFTHLLSSTLYEKRFGPFFLEPVVAGLTTPTPLEP 120
Query: 115 EDKPFICTMDSIG 127
KP+I TMD+IG
Sbjct: 121 HPKPYISTMDTIG 133
>gi|294879946|ref|XP_002768837.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
gi|239871775|gb|EER01555.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
Length = 444
Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 67/129 (51%), Positives = 94/129 (72%), Gaps = 1/129 (0%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGV-QLQTIATDFQRISKIHDRLFIGLSGLATDS 60
+I EYNG +++AM G+ C IA DRR GV QLQT++ + Q++ + R +G GLATDS
Sbjct: 241 NIMEYNGGSVIAMKGEGCVGIACDRRYGVNQLQTVSANMQKVYPMTSRCLVGFQGLATDS 300
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTL Q L FR KLY+L+E+R+M + + L++ +LYEKRFGPYFC+PVIAGL ++ +PFI
Sbjct: 301 QTLSQLLKFRLKLYKLKEDREMPCDVVSHLMATMLYEKRFGPYFCEPVIAGLKNDGEPFI 360
Query: 121 CTMDSIGAK 129
+ D IG +
Sbjct: 361 SSFDLIGTE 369
>gi|237830643|ref|XP_002364619.1| proteasome subunit beta type 3, putative [Toxoplasma gondii ME49]
gi|211962283|gb|EEA97478.1| proteasome subunit beta type 3, putative [Toxoplasma gondii ME49]
gi|221487700|gb|EEE25932.1| proteasome subunit beta type, putative [Toxoplasma gondii GT1]
gi|221507494|gb|EEE33098.1| proteasome subunit beta type, putative [Toxoplasma gondii VEG]
Length = 205
Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 70/126 (55%), Positives = 94/126 (74%), Gaps = 3/126 (2%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGV-QLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
YNGSA+VAM GK+C IASD RLGV Q T++ DFQ++ K+++ F+GL+GLATD QT++
Sbjct: 4 YNGSAVVAMAGKDCVGIASDTRLGVNQFGTVSADFQKVFKMNNHTFVGLAGLATDVQTVH 63
Query: 65 QRLVFRHKLYQLREE-RDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPFICT 122
+ LVFR LYQLREE +M PE +++VS++LY +RF PYF PV+AGL E +PF+
Sbjct: 64 KELVFRSNLYQLREEVTEMPPEIMSNVVSSMLYGRRFAPYFVSPVVAGLHPETHQPFLSA 123
Query: 123 MDSIGA 128
D IGA
Sbjct: 124 FDYIGA 129
>gi|225713992|gb|ACO12842.1| Proteasome subunit beta type-3 [Lepeophtheirus salmonis]
gi|290463059|gb|ADD24577.1| Proteasome subunit beta type-3 [Lepeophtheirus salmonis]
Length = 205
Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 67/129 (51%), Positives = 95/129 (73%), Gaps = 1/129 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MS+ NGSA++AM G +C +IASD R G+ T+ TDF + ++ LF+GL+GLATD
Sbjct: 1 MSVFTINGSAVLAMKGNDCVSIASDLRFGINRHTVMTDFPKTFEMGPGLFVGLAGLATDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-DEDKPF 119
QT+ Q+L FR K+++LRE R M+P TF++++S LLYE+RFGP+F P++AG E+KPF
Sbjct: 61 QTVQQKLNFRMKMFELREGRKMRPNTFSTMLSHLLYERRFGPFFVNPIVAGYDYVENKPF 120
Query: 120 ICTMDSIGA 128
I +MD IGA
Sbjct: 121 ISSMDLIGA 129
>gi|68488966|ref|XP_711676.1| hypothetical protein CaO19.1336 [Candida albicans SC5314]
gi|77023006|ref|XP_888947.1| hypothetical protein CaO19_1336 [Candida albicans SC5314]
gi|46432996|gb|EAK92454.1| hypothetical protein CaO19.1336 [Candida albicans SC5314]
gi|76573760|dbj|BAE44844.1| hypothetical protein [Candida albicans]
gi|238883475|gb|EEQ47113.1| proteasome component PUP3 [Candida albicans WO-1]
Length = 206
Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 92/122 (75%), Gaps = 1/122 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAM+GK+C AIASD RLG Q ++ +F++I + D+ F+GL+GLATD +L +
Sbjct: 8 NGGAAVAMIGKDCIAIASDLRLGQQSLGVSNNFEKIFSVGDKTFLGLTGLATDVISLKEL 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
F+ LY+LREER+++P T A+LVS+ LYE+RFGP+F P++AGLS +D KPFIC DS
Sbjct: 68 FRFKTNLYKLREERNIEPSTLANLVSSSLYERRFGPWFVSPIVAGLSSKDNKPFICGFDS 127
Query: 126 IG 127
IG
Sbjct: 128 IG 129
>gi|118376326|ref|XP_001021345.1| Proteasome A-type and B-type family protein [Tetrahymena
thermophila]
gi|89303112|gb|EAS01100.1| Proteasome A-type and B-type family protein [Tetrahymena
thermophila SB210]
Length = 209
Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 92/126 (73%), Gaps = 4/126 (3%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
YNG +++AM G+ C AI +DRRLG Q QT+AT+FQ++ +I D + +GL+GLATD QT ++
Sbjct: 7 YNGGSMLAMKGEQCVAIGADRRLGAQFQTVATNFQKVFRIQDNILLGLTGLATDVQTFHR 66
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-DEDK---PFIC 121
+ ++ LY+LRE +DMK TF +L+SA LYEKR+GPYF P++AGL DE K P
Sbjct: 67 LIQYKVNLYRLRENKDMKVNTFVNLISATLYEKRWGPYFVSPIVAGLEYDEVKGVIPITA 126
Query: 122 TMDSIG 127
T DSIG
Sbjct: 127 TYDSIG 132
>gi|405117743|gb|AFR92518.1| proteasome subunit beta type 3 [Cryptococcus neoformans var. grubii
H99]
Length = 210
Score = 145 bits (365), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 68/133 (51%), Positives = 95/133 (71%), Gaps = 6/133 (4%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MS+ E NG ++VAM+GK+C AIASD RLG Q IA +F ++ ++D+L+ GL GLATD
Sbjct: 1 MSVMELNGGSVVAMIGKDCVAIASDLRLGNQQVGIAANFDKVFPVNDKLYCGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAG------LSD 114
TL + L FR +Y+++EER++ P+TF L+S+ LYEKRFGP+F +PV+AG L
Sbjct: 61 YTLREHLRFRVNMYRMKEEREITPKTFTHLLSSTLYEKRFGPFFLEPVVAGLPTPTSLEP 120
Query: 115 EDKPFICTMDSIG 127
KP+I TMD+IG
Sbjct: 121 HPKPYISTMDTIG 133
>gi|340369178|ref|XP_003383125.1| PREDICTED: proteasome subunit beta type-3-like [Amphimedon
queenslandica]
Length = 206
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/124 (57%), Positives = 89/124 (71%), Gaps = 1/124 (0%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
EYNGSA+V M+G C AIA+DRRLG+Q QTIAT F +I +++ L+IG GLATD+ T+
Sbjct: 6 EYNGSAVVGMIGSGCVAIAADRRLGIQGQTIATTFDKIYPMNESLYIGFYGLATDALTVS 65
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDK-PFICTM 123
RL ++ LYQLRE R +KP+ F + S LLY KRFG YF +PVIAGL K P+I TM
Sbjct: 66 SRLKYQLNLYQLRENRQIKPKAFMHMTSNLLYSKRFGYYFVEPVIAGLDPVTKDPYIATM 125
Query: 124 DSIG 127
D IG
Sbjct: 126 DLIG 129
>gi|320164183|gb|EFW41082.1| proteasome subunit beta type-3 [Capsaspora owczarzaki ATCC 30864]
Length = 192
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/115 (58%), Positives = 86/115 (74%), Gaps = 1/115 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
M GK C AIA+DRR G+Q QT++TDFQ+ K+ DRLFIGL+GLATD QT+ +L FR +
Sbjct: 1 MKGKGCVAIAADRRFGIQAQTVSTDFQKTFKMGDRLFIGLAGLATDVQTVASKLQFRVNM 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTMDSIG 127
Y LREER + PETF ++V+ +LYEKRFGP+F +PVIAGL +PF+ D IG
Sbjct: 61 YHLREERSVAPETFMNIVANVLYEKRFGPFFIEPVIAGLDPVSGEPFVAATDLIG 115
>gi|294948700|ref|XP_002785851.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
gi|239899959|gb|EER17647.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
Length = 202
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 92/126 (73%), Gaps = 1/126 (0%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGV-QLQTIATDFQRISKIHDRLFIGLSGLATDSQTL 63
EYNG +++AM G+ C IA DRR GV QLQT++ + Q++ + R +G GLATDSQTL
Sbjct: 2 EYNGGSVIAMKGEGCVGIACDRRYGVNQLQTVSANMQKVYPMTSRCLVGFQGLATDSQTL 61
Query: 64 YQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTM 123
Q L FR KLY+L+E+R+M + + L++ +LYEKRFGPYFC+PVIAGL ++ +PFI +
Sbjct: 62 SQLLKFRLKLYKLKEDREMPCDVVSHLMATMLYEKRFGPYFCEPVIAGLKNDGEPFISSF 121
Query: 124 DSIGAK 129
D IG +
Sbjct: 122 DLIGTE 127
>gi|134106685|ref|XP_777884.1| hypothetical protein CNBA3530 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260584|gb|EAL23237.1| hypothetical protein CNBA3530 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 216
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/133 (51%), Positives = 95/133 (71%), Gaps = 6/133 (4%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MS+ E NG ++VAM+GK+C AIASD RLG Q IA +F ++ I+D+L+ GL GLATD
Sbjct: 1 MSVMELNGGSVVAMIGKDCVAIASDLRLGNQQVGIAANFDKVFPINDKLYCGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAG------LSD 114
TL + L FR +Y+++EER++ P+TF L+S+ LYEKRFGP+F +PV+AG L
Sbjct: 61 YTLREHLRFRVNMYRMKEEREITPKTFTHLLSSTLYEKRFGPFFLEPVVAGLPTPTSLEP 120
Query: 115 EDKPFICTMDSIG 127
+P+I TMD+IG
Sbjct: 121 HPRPYISTMDTIG 133
>gi|350536231|ref|NP_001232468.1| putative proteasome subunit beta type 3 [Taeniopygia guttata]
gi|197128389|gb|ACH44887.1| putative proteasome subunit beta type 3 [Taeniopygia guttata]
gi|197128390|gb|ACH44888.1| putative proteasome subunit beta type 3 [Taeniopygia guttata]
Length = 205
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/163 (51%), Positives = 111/163 (68%), Gaps = 8/163 (4%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM G+ C AIA+DRR G+Q QT++TD QRI + RL +GL+GLATD
Sbjct: 1 MSILAYNGGAVLAMRGRGCVAIAADRRFGIQAQTVSTDCQRIFPMGQRLLLGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
Q++ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ +PVIAGL +PF
Sbjct: 61 QSVAQRLKFRLNLYELKEGRQIKPQTFMSMVSNLLYERRFGPYYAEPVIAGLDPVSLEPF 120
Query: 120 ICTMDSIGAKYVGSLQKILLLLELLESLFMVPVRQCSSLIWNP 162
IC++D IG V Q +L E ++ + C SL W P
Sbjct: 121 ICSLDLIGCPMV--TQDFVLSGTCSEQMYGM----CESL-WEP 156
>gi|395331331|gb|EJF63712.1| N-terminal nucleophile aminohydrolase [Dichomitus squalens LYAD-421
SS1]
Length = 208
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/131 (51%), Positives = 95/131 (72%), Gaps = 4/131 (3%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG +++AMVGK+C AIASD RLG Q I+++FQ+I + +R+F+GL GLATD
Sbjct: 1 MSIMEYNGGSVIAMVGKDCVAIASDLRLGNQALGISSNFQKIFPMTNRIFLGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED---- 116
TL + +R ++ ++EER+++PETFA LVS+ LYE+RFGP+F +PV+AGL
Sbjct: 61 TTLKETFRYRVNMFTIKEEREIEPETFAHLVSSTLYERRFGPWFIEPVMAGLQKTHDGSY 120
Query: 117 KPFICTMDSIG 127
KP+I D IG
Sbjct: 121 KPYIAATDLIG 131
>gi|58258585|ref|XP_566705.1| proteasome subunit beta type 3 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222842|gb|AAW40886.1| proteasome subunit beta type 3, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 210
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/133 (51%), Positives = 95/133 (71%), Gaps = 6/133 (4%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MS+ E NG ++VAM+GK+C AIASD RLG Q IA +F ++ I+D+L+ GL GLATD
Sbjct: 1 MSVMELNGGSVVAMIGKDCVAIASDLRLGNQQVGIAANFDKVFPINDKLYCGLPGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAG------LSD 114
TL + L FR +Y+++EER++ P+TF L+S+ LYEKRFGP+F +PV+AG L
Sbjct: 61 YTLREHLRFRVNMYRMKEEREITPKTFTHLLSSTLYEKRFGPFFLEPVVAGLPTPTSLEP 120
Query: 115 EDKPFICTMDSIG 127
+P+I TMD+IG
Sbjct: 121 HPRPYISTMDTIG 133
>gi|328862302|gb|EGG11403.1| 20S proteasome subunit [Melampsora larici-populina 98AG31]
Length = 201
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 93/123 (75%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG +++AMVGK+C AIA D RLG Q T+A +F+++ + D+++IGL GLA+D+ TL
Sbjct: 2 ELNGGSVIAMVGKDCVAIACDLRLGNQALTVACNFEKVFPVTDKVYIGLPGLASDTVTLR 61
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
Q+ R +Y+++EER ++PET A LVS+ LY+KRFGPYF +PVIAGL+ +++PFI D
Sbjct: 62 QQFRHRVNMYKMKEERTIEPETMAHLVSSTLYQKRFGPYFVEPVIAGLNSKNEPFIAATD 121
Query: 125 SIG 127
IG
Sbjct: 122 LIG 124
>gi|401881470|gb|EJT45770.1| proteasome subunit beta type 3 [Trichosporon asahii var. asahii CBS
2479]
Length = 207
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/129 (50%), Positives = 94/129 (72%), Gaps = 6/129 (4%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
EYNG ++VAMVGK+C AIA D RLG Q +A +F+++ ++D L+ GL GLATD TL
Sbjct: 2 EYNGGSVVAMVGKDCVAIAGDLRLGQQATGVAMNFEKVFPVNDTLYFGLPGLATDVFTLK 61
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS------DEDKP 118
+++ FR +Y+++EER++ P TF +L+S+ LYEKRFGPYF +PV+AG++ +P
Sbjct: 62 EQMRFRVNMYRMKEEREITPVTFTNLLSSTLYEKRFGPYFIEPVVAGIAPATEANPNPQP 121
Query: 119 FICTMDSIG 127
FI TMD+IG
Sbjct: 122 FISTMDTIG 130
>gi|449016282|dbj|BAM79684.1| 20S core proteasome subunit beta 3 [Cyanidioschyzon merolae strain
10D]
Length = 207
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 88/122 (72%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
YNG A+ A G C AIA+DRR G T+A D R+ ++HDRL +GL+GLATD TL +
Sbjct: 9 YNGGAVFAATGNQCVAIAADRRFGQAQLTLACDANRLFRVHDRLVLGLTGLATDCLTLAE 68
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
R+ R LY+L E+R+ KP T ++LVSALLYE+RF PYF +PVI GLS ++KP+ C+MD
Sbjct: 69 RVRMRTNLYRLGEKREPKPATISALVSALLYERRFAPYFVEPVIVGLSGDNKPYCCSMDL 128
Query: 126 IG 127
+G
Sbjct: 129 LG 130
>gi|393222969|gb|EJD08453.1| 20S proteasome subunit beta 3 [Fomitiporia mediterranea MF3/22]
Length = 205
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+YNG ++VAMVGK+C AIASD RLG+Q T+A + +++ + DR+++GL+GLATD TL
Sbjct: 2 QYNGGSVVAMVGKDCVAIASDLRLGMQALTVACNHEKVFPVTDRIYLGLAGLATDVATLR 61
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL----SDEDKPFI 120
+R +R +Y ++EERD+ PETFA LVS+ LYEKRFG YF +PVIAG+ + + +P+I
Sbjct: 62 ERFRYRVNMYTIKEERDISPETFARLVSSTLYEKRFGNYFVEPVIAGMGTAPNGKAQPYI 121
Query: 121 CTMDSIG 127
D IG
Sbjct: 122 AAADVIG 128
>gi|68489003|ref|XP_711658.1| hypothetical protein CaO19.8916 [Candida albicans SC5314]
gi|46432977|gb|EAK92436.1| hypothetical protein CaO19.8916 [Candida albicans SC5314]
Length = 206
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 90/122 (73%), Gaps = 1/122 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAM+GK C AI SD RLG Q ++ +F++I + D+ F+GL+GLATD +L +
Sbjct: 8 NGGAAVAMIGKGCIAIGSDLRLGQQSLGVSNNFEKIFSVGDKTFLGLTGLATDVISLKEL 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
F+ LY+LREER+++P T A+LVS+ LYE+RFGP+F P++AGLS +D KPFIC DS
Sbjct: 68 FRFKTNLYKLREERNIEPSTLANLVSSSLYERRFGPWFVSPIVAGLSSKDNKPFICGFDS 127
Query: 126 IG 127
IG
Sbjct: 128 IG 129
>gi|240849169|ref|NP_001155482.1| proteasome beta 3 subunit-like [Acyrthosiphon pisum]
gi|239792821|dbj|BAH72708.1| ACYPI002587 [Acyrthosiphon pisum]
Length = 205
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 93/128 (72%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI +YNG AL+ M GK+C AIA+D+R G+Q QT++ DF ++ +I+ F+G GLATD
Sbjct: 1 MSIMDYNGGALIGMKGKDCVAIATDKRFGIQAQTVSLDFTKVFQINPHTFMGFPGLATDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
T+Y++++FR +LY+L+E R + P+ ASLVS LLYE RF P+F +P+I L + +P+
Sbjct: 61 FTVYEKIMFRKRLYELKENRKISPKALASLVSNLLYENRFSPFFVEPMIVALDEVTLEPY 120
Query: 120 ICTMDSIG 127
+C MD IG
Sbjct: 121 MCDMDLIG 128
>gi|307195647|gb|EFN77489.1| Proteasome subunit beta type-3 [Harpegnathos saltator]
Length = 192
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 63/121 (52%), Positives = 89/121 (73%), Gaps = 1/121 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
M GKNC AIA+DRR G+Q QTI DFQ+I ++ L++ L GLA+D+QT+ +RL FR L
Sbjct: 1 MKGKNCVAIAADRRFGIQAQTIMCDFQKIYEMGSHLYVSLPGLASDTQTVMERLRFRLNL 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTMDSIGAKYVG 132
Y+L+E R + P+TF +++S LLYE+RFGPYF +P++AGL +PFIC MD IG++ +
Sbjct: 61 YELKENRKIHPKTFTAMISNLLYERRFGPYFVEPIVAGLDPVTSEPFICNMDLIGSRNIA 120
Query: 133 S 133
Sbjct: 121 E 121
>gi|393911865|gb|EFO27070.2| proteasome subunit beta type-3 [Loa loa]
Length = 205
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 92/128 (71%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI Y+G ++AM G +C IASD RLG Q+ TIAT+ +++ K+ ++++IGL G +D+
Sbjct: 1 MSIMSYSGGTILAMAGNDCVCIASDLRLGEQMTTIATNMKKVHKLGEKVYIGLGGFHSDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-DEDKPF 119
+T+ ++ FR LY+LRE R +KPE A +VS LLY+ RFG YF +P+IAGL +KP+
Sbjct: 61 KTVLDKITFRKNLYELRENRKIKPEVAAVMVSNLLYQHRFGGYFTEPLIAGLDPTTNKPY 120
Query: 120 ICTMDSIG 127
IC MD+IG
Sbjct: 121 ICAMDTIG 128
>gi|402589044|gb|EJW82976.1| proteasome subunit beta type [Wuchereria bancrofti]
Length = 205
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 92/128 (71%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI Y+G ++AM G +C IASD RLG Q+ TIAT+ +++ K+ ++++IGL G +D+
Sbjct: 1 MSIMSYSGGTILAMAGNDCVCIASDLRLGEQMTTIATNMKKVHKLGEKVYIGLGGFNSDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-DEDKPF 119
+T+ ++ FR LY+LRE R +KPE A +VS LLY+ RFG YF +P+IAGL +KP+
Sbjct: 61 KTVLDKITFRKNLYELRENRKIKPEVTAVMVSNLLYQHRFGGYFTEPLIAGLDPTTNKPY 120
Query: 120 ICTMDSIG 127
IC MD+IG
Sbjct: 121 ICAMDTIG 128
>gi|354548652|emb|CCE45389.1| hypothetical protein CPAR2_704030 [Candida parapsilosis]
Length = 206
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 91/122 (74%), Gaps = 1/122 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAM+GK+C AIASD RLG Q ++ +F++I + D+ ++ L+GLATD TL++
Sbjct: 8 NGGAAVAMIGKDCVAIASDLRLGSQSLGVSNNFEKIFEFGDKTYMALTGLATDVITLHEL 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
F+ LY+LREER ++P T A+LVS+ LYE+RFGP+F P++AGLS +D KPFIC DS
Sbjct: 68 FKFKTNLYKLREERSIEPSTLANLVSSSLYERRFGPWFVGPIVAGLSSKDNKPFICGFDS 127
Query: 126 IG 127
IG
Sbjct: 128 IG 129
>gi|225712652|gb|ACO12172.1| Proteasome subunit beta type-3 [Lepeophtheirus salmonis]
Length = 205
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/129 (51%), Positives = 94/129 (72%), Gaps = 1/129 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MS+ NGSA++AM G +C +IASD R G+ T+ TDF + ++ LF+GL+GLATD
Sbjct: 1 MSVFTINGSAVLAMKGNDCVSIASDLRFGINRHTVMTDFPKTLEMGPGLFVGLAGLATDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-DEDKPF 119
QT+ Q+L FR K+++LRE R M+P TF++++S LLYE+RFGP+F ++AG E+KPF
Sbjct: 61 QTVQQKLNFRMKMFELREGRKMRPNTFSTMLSHLLYERRFGPFFVNSIVAGYDYVENKPF 120
Query: 120 ICTMDSIGA 128
I +MD IGA
Sbjct: 121 ISSMDLIGA 129
>gi|170583083|ref|XP_001896421.1| proteasome subunit beta type 3 [Brugia malayi]
gi|158596348|gb|EDP34705.1| proteasome subunit beta type 3, putative [Brugia malayi]
Length = 205
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 92/128 (71%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI Y+G ++AM G +C IASD RLG Q+ TIAT+ +++ K+ ++++IGL G +D+
Sbjct: 1 MSIMSYSGGTILAMAGNDCVCIASDLRLGEQMTTIATNMKKVHKLGEKVYIGLGGFHSDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-DEDKPF 119
+T+ ++ FR LY+LRE R +KPE A +VS LLY+ RFG YF +P+IAGL +KP+
Sbjct: 61 KTVLDKITFRKNLYELRENRKIKPEVAAVMVSNLLYQHRFGGYFTEPLIAGLDPTTNKPY 120
Query: 120 ICTMDSIG 127
IC MD+IG
Sbjct: 121 ICAMDTIG 128
>gi|123449540|ref|XP_001313488.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
gi|121895373|gb|EAY00559.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
Length = 206
Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 68/128 (53%), Positives = 95/128 (74%), Gaps = 1/128 (0%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
I+ YNGS ++AM G +C AIASDRRLGV + T++ DF+RI +I+DR+++GL+GLATD
Sbjct: 3 DISTYNGSCVLAMAGDHCVAIASDRRLGVNMLTVSKDFKRIFQINDRIYLGLAGLATDVL 62
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPFI 120
T+ ++L F L +LREER + P+ F +LV + LYEKRF P+F PVIAGL E ++P++
Sbjct: 63 TVREQLRFDVNLLELREERPIDPKKFMNLVKSTLYEKRFSPFFVTPVIAGLLPETNEPYL 122
Query: 121 CTMDSIGA 128
DSIGA
Sbjct: 123 AASDSIGA 130
>gi|328715258|ref|XP_001950836.2| PREDICTED: proteasome subunit beta type-3-like [Acyrthosiphon
pisum]
Length = 205
Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 62/128 (48%), Positives = 93/128 (72%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI +YNG AL+ M GK+C AIA+D+R G+Q QT++ DF ++ +I+ ++G GLATD
Sbjct: 1 MSIMDYNGGALIGMKGKDCVAIATDKRFGIQAQTVSLDFTKVFQINPHTYMGFPGLATDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
T+Y++++FR +LY+L+E R + P+ ASLVS LLYE RF P+F +P+I L + +P+
Sbjct: 61 FTVYEKIMFRKRLYELKENRKISPKALASLVSNLLYENRFSPFFVEPMIVALDEVTLEPY 120
Query: 120 ICTMDSIG 127
+C MD IG
Sbjct: 121 MCDMDLIG 128
>gi|239788580|dbj|BAH70963.1| ACYPI007526 [Acyrthosiphon pisum]
Length = 205
Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 62/128 (48%), Positives = 93/128 (72%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI +YNG AL+ M GK+C AIA+D+R G+Q QT++ DF ++ +I+ ++G GLATD
Sbjct: 1 MSIMDYNGGALIGMKGKDCVAIATDKRFGIQAQTVSLDFTKVFQINPHTYMGFPGLATDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
T+Y++++FR +LY+L+E R + P+ ASLVS LLYE RF P+F +P+I L + +P+
Sbjct: 61 FTVYEKIMFRKRLYELKENRKISPKALASLVSNLLYENRFSPFFVEPMIVALDEVTLEPY 120
Query: 120 ICTMDSIG 127
+C MD IG
Sbjct: 121 MCDMDLIG 128
>gi|50419453|ref|XP_458253.1| DEHA2C13222p [Debaryomyces hansenii CBS767]
gi|49653919|emb|CAG86329.1| DEHA2C13222p [Debaryomyces hansenii CBS767]
Length = 206
Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 91/122 (74%), Gaps = 1/122 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG + VAMVGK+C AIA D RLG Q ++ +F++I ++ D+ F+GL+GLATD TL +
Sbjct: 8 NGGSAVAMVGKDCIAIACDLRLGNQSLGLSNNFEKIFQLGDKTFLGLTGLATDVITLSET 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
F++ LY+LREER+++P T A+LVS+ LYEKRFGPYF P++AGL S +KPFIC D
Sbjct: 68 FRFKNNLYKLREEREIEPTTLANLVSSTLYEKRFGPYFVGPIVAGLDSKTNKPFICGFDL 127
Query: 126 IG 127
IG
Sbjct: 128 IG 129
>gi|190348459|gb|EDK40915.2| hypothetical protein PGUG_05013 [Meyerozyma guilliermondii ATCC
6260]
Length = 205
Score = 141 bits (356), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 87/121 (71%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGK+C AIA D RLG Q +A +F+++ ++ F+GL+GLATD TL +
Sbjct: 8 NGGAAVAMVGKDCIAIACDTRLGSQSLGLANNFEKVFQMGKTTFLGLTGLATDVITLRED 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
++ LY+LREER+M+P+T A+LVS LYE+RFGPYF P++AGL +PFIC DSI
Sbjct: 68 FRLKNNLYKLREEREMEPKTLANLVSTSLYERRFGPYFVSPIVAGLGKGGQPFICGFDSI 127
Query: 127 G 127
G
Sbjct: 128 G 128
>gi|340923906|gb|EGS18809.1| hypothetical protein CTHT_0054190 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 206
Score = 141 bits (356), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 76/157 (48%), Positives = 102/157 (64%), Gaps = 8/157 (5%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGKNC AIA D RLG+Q T++ +F +I + D +F+GL+GLATD QT+
Sbjct: 8 NGGACVAMVGKNCVAIACDLRLGLQALTVSNNFPKIFQYGDHVFLGLTGLATDVQTVADI 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPFICTMDS 125
++ LY+LREER + P TFA+LVS+ LYE+RFGP+F PV+AGL + +PFIC DS
Sbjct: 68 FRYKVNLYRLREERHIAPRTFANLVSSSLYERRFGPWFVSPVVAGLDPKTGEPFICGFDS 127
Query: 126 IGAKYVGSLQKILLLLELLESLFMVPVRQCSSLIWNP 162
IG + + ++ E LF + C SL W P
Sbjct: 128 IGC--IDFAKDFIVSGTATEQLFGM----CESL-WEP 157
>gi|145514243|ref|XP_001443032.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410393|emb|CAK75635.1| unnamed protein product [Paramecium tetraurelia]
Length = 204
Score = 141 bits (356), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 65/128 (50%), Positives = 87/128 (67%), Gaps = 1/128 (0%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
I EYNG ++V M GKNC A+A DRR G Q+ TI T++Q++ KI D + + LSGL +D
Sbjct: 3 GIFEYNGGSIVGMKGKNCIAMACDRRFGQQMSTITTNYQKVFKIQDNILLALSGLNSDIH 62
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
T Y + LY L+E R MKP TFA+LV++ LYE+RFGP+F P++AGL + KP +
Sbjct: 63 TFYALMEKEINLYNLKENRKMKPTTFANLVASALYERRFGPFFVTPIVAGL-ENGKPILA 121
Query: 122 TMDSIGAK 129
T DSIG K
Sbjct: 122 TYDSIGCK 129
>gi|145514570|ref|XP_001443190.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410568|emb|CAK75793.1| unnamed protein product [Paramecium tetraurelia]
Length = 204
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/128 (50%), Positives = 87/128 (67%), Gaps = 1/128 (0%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
I EYNG ++V M GKNC A+A DRR G Q+ TI T++Q++ KI D + + LSGL +D
Sbjct: 3 GIFEYNGGSIVGMKGKNCIAMACDRRFGQQMSTITTNYQKVFKIQDNILLALSGLNSDIH 62
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
T Y + LY L+E R MKP TFA+LV++ LYE+RFGP+F P++AGL + KP +
Sbjct: 63 TFYALMEKEINLYNLKENRKMKPSTFANLVASSLYERRFGPFFVTPIVAGL-ENGKPILA 121
Query: 122 TMDSIGAK 129
T DSIG K
Sbjct: 122 TYDSIGCK 129
>gi|197128391|gb|ACH44889.1| putative proteasome subunit beta type 3 [Taeniopygia guttata]
Length = 205
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/163 (50%), Positives = 110/163 (67%), Gaps = 8/163 (4%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI NG A++AM G+ C AIA+DRR G+Q QT++TD QRI + RL +GL+GLATD
Sbjct: 1 MSILACNGGAVLAMRGRGCVAIAADRRFGIQAQTVSTDCQRIFPMGQRLLLGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
Q++ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ +PVIAGL +PF
Sbjct: 61 QSVAQRLKFRLNLYELKEGRQIKPQTFMSMVSNLLYERRFGPYYAEPVIAGLDPVSLEPF 120
Query: 120 ICTMDSIGAKYVGSLQKILLLLELLESLFMVPVRQCSSLIWNP 162
IC++D IG V Q +L E ++ + C SL W P
Sbjct: 121 ICSLDLIGCPMV--TQDFVLSGTCSEQMYGM----CESL-WEP 156
>gi|254570058|ref|XP_002492139.1| Beta 3 subunit of the 20S proteasome involved in
ubiquitin-dependent catabolism [Komagataella pastoris
GS115]
gi|238031936|emb|CAY69859.1| Beta 3 subunit of the 20S proteasome involved in
ubiquitin-dependent catabolism [Komagataella pastoris
GS115]
gi|328351376|emb|CCA37775.1| 20S proteasome subunit beta 3 [Komagataella pastoris CBS 7435]
Length = 205
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 91/122 (74%), Gaps = 2/122 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG + VAMVGK+C AIA D RLG Q +A +F+++ + +F+GL+GLATD TL +
Sbjct: 8 NGGSAVAMVGKDCVAIACDLRLGNQSLGVANNFEKVFQFG-HVFLGLTGLATDVITLNET 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
F+ LY++REERD++PETFA+LVS LYEKRFGPYF P++AG+ S ++PFIC+ DS
Sbjct: 67 FRFKTNLYKMREERDIEPETFANLVSTSLYEKRFGPYFVGPIVAGINSKTNQPFICSFDS 126
Query: 126 IG 127
IG
Sbjct: 127 IG 128
>gi|50556674|ref|XP_505745.1| YALI0F22341p [Yarrowia lipolytica]
gi|49651615|emb|CAG78556.1| YALI0F22341p [Yarrowia lipolytica CLIB122]
Length = 206
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/126 (54%), Positives = 93/126 (73%), Gaps = 5/126 (3%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG + VAMVGK+C AIA D R+G Q ++ DF+++ D +++GL+GLATD QTL+
Sbjct: 6 EINGGSCVAMVGKDCVAIACDLRMGSQGLGVSNDFEKVFNYGDNVYLGLTGLATDVQTLH 65
Query: 65 QRLVFRHK--LYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFIC 121
+ VFR K LY++ EER ++PETFA+LVS+ LYEKRFGPYF P++AG+ S +KPFIC
Sbjct: 66 E--VFREKTNLYKMAEERQIEPETFANLVSSTLYEKRFGPYFVGPIVAGINSKTEKPFIC 123
Query: 122 TMDSIG 127
D IG
Sbjct: 124 GFDLIG 129
>gi|324524031|gb|ADY48349.1| Proteasome subunit beta type-3 [Ascaris suum]
Length = 205
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 91/128 (71%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG ++AM G C IA+D RLG Q+ TIAT+ +++ K+ DR++IGL G +D+
Sbjct: 1 MSIMSYNGGTILAMAGNECVCIATDLRLGEQMTTIATNVKKVHKLGDRVYIGLGGFYSDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPF 119
+T+ +++FR LY+LRE R +KPE A+++S LLY+ RFG Y +P++AGL +K +
Sbjct: 61 KTVLDKILFRKNLYELRENRKIKPEVAATMISNLLYQHRFGGYLTEPLVAGLDPVTNKAY 120
Query: 120 ICTMDSIG 127
IC MD+IG
Sbjct: 121 ICGMDTIG 128
>gi|448536903|ref|XP_003871223.1| Pup3 beta 3 subunit of the 20S proteasome [Candida orthopsilosis Co
90-125]
gi|380355579|emb|CCG25098.1| Pup3 beta 3 subunit of the 20S proteasome [Candida orthopsilosis]
Length = 245
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 90/122 (73%), Gaps = 1/122 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAM+GK+C AIASD RLG Q ++ +F+++ + D+ ++ L+GLATD TL +
Sbjct: 47 NGGAAVAMIGKDCVAIASDLRLGSQSLGVSNNFEKVFEFGDKTYMALTGLATDVITLREL 106
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
F+ LY+LREER ++P T A+LVS+ LYE+RFGP+F P++AGLS +D KPFIC DS
Sbjct: 107 FKFKTNLYKLREERSIEPSTLANLVSSSLYERRFGPWFVGPIVAGLSSKDNKPFICGFDS 166
Query: 126 IG 127
IG
Sbjct: 167 IG 168
>gi|126138200|ref|XP_001385623.1| hypothetical protein PICST_62487 [Scheffersomyces stipitis CBS
6054]
gi|126092901|gb|ABN67594.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 206
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 89/122 (72%), Gaps = 1/122 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG + VAMVGK+C AIA D RLG Q +A +F++I + D+ F+GL+GLA+D TL +
Sbjct: 8 NGGSAVAMVGKDCIAIACDLRLGNQSLGLANNFEKIFQFGDKTFLGLTGLASDVTTLSEV 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
F++ LY+LREER ++P+T A+LVS+ LYEKRFGPYF P++AGL S KPFIC D
Sbjct: 68 FRFKNNLYKLREERQIEPKTLANLVSSTLYEKRFGPYFIGPIVAGLDSKTSKPFICGFDL 127
Query: 126 IG 127
IG
Sbjct: 128 IG 129
>gi|390463598|ref|XP_003733064.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-3
[Callithrix jacchus]
Length = 116
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 66/113 (58%), Positives = 84/113 (74%), Gaps = 1/113 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGP-YFCQPVIAGL 112
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGP Q ++ G+
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPTTLSQSLLGGI 113
>gi|82802840|gb|ABB92464.1| rcPSMB3 [Homo sapiens]
Length = 204
Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 69/128 (53%), Positives = 89/128 (69%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKN AIA+DR G+Q Q + TDFQ I + L+IGL+GLATD
Sbjct: 1 MSIMSYNGGAIMAMKGKNRVAIAADRHFGIQAQMVTTDFQEIFPMGGWLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
Q + Q L F+ LY+L+E + +KP TF S+V+ LYEK FGPY+ PVIAGL + KPF
Sbjct: 61 QRVAQCLKFQLNLYELKEGQQIKPYTFTSMVANFLYEKHFGPYYTDPVIAGLDLKTFKPF 120
Query: 120 ICTMDSIG 127
C++D IG
Sbjct: 121 SCSLDLIG 128
>gi|119590978|gb|EAW70572.1| hCG1644450 [Homo sapiens]
Length = 205
Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 69/128 (53%), Positives = 89/128 (69%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKN AIA+DR G+Q Q + TDFQ I + L+IGL+GLATD
Sbjct: 1 MSIMSYNGGAIMAMKGKNRVAIAADRHFGIQAQMVTTDFQEIFPMGGWLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
Q + Q L F+ LY+L+E + +KP TF S+V+ LYEK FGPY+ PVIAGL + KPF
Sbjct: 61 QRVAQCLKFQLNLYELKEGQQIKPYTFTSMVANFLYEKHFGPYYTDPVIAGLDLKTFKPF 120
Query: 120 ICTMDSIG 127
C++D IG
Sbjct: 121 SCSLDLIG 128
>gi|294889351|ref|XP_002772769.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
gi|239877319|gb|EER04585.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
50983]
Length = 129
Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 87/117 (74%), Gaps = 1/117 (0%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGV-QLQTIATDFQRISKIHDRLFIGLSGLATDSQTL 63
EYNG +++AM G+ C IA DRR GV QLQT++ + Q++ + R +G GLATDSQTL
Sbjct: 2 EYNGGSVIAMKGEGCVGIACDRRYGVNQLQTVSANMQKVYPMTSRCLVGFQGLATDSQTL 61
Query: 64 YQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
Q L FR KLY+L+E+R+M + + L++ +LYEKRFGPYFC+PVIAGL ++ +PFI
Sbjct: 62 SQLLKFRLKLYKLKEDREMPCDVVSHLMATMLYEKRFGPYFCEPVIAGLKNDGEPFI 118
>gi|146414175|ref|XP_001483058.1| hypothetical protein PGUG_05013 [Meyerozyma guilliermondii ATCC
6260]
Length = 205
Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 64/121 (52%), Positives = 86/121 (71%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGK+C AIA D RLG Q +A +F+++ ++ F+GL+GLATD TL +
Sbjct: 8 NGGAAVAMVGKDCIAIACDTRLGSQSLGLANNFEKVFQMGKTTFLGLTGLATDVITLRED 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
++ LY+LREER+M+P+T A+LVS LYE+RFGPYF P++AGL +PFIC D I
Sbjct: 68 FRLKNNLYKLREEREMEPKTLANLVSTSLYERRFGPYFVSPIVAGLGKGGQPFICGFDLI 127
Query: 127 G 127
G
Sbjct: 128 G 128
>gi|453082236|gb|EMF10284.1| N-terminal nucleophile aminohydrolase [Mycosphaerella populorum
SO2202]
Length = 206
Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 87/122 (71%), Gaps = 1/122 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGK+C AIA D RLG+Q T++ +F +I ++GL+GLATD T+ +
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFPFGSSTYLGLTGLATDVSTVSEL 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
++ +Y+LREERD+ P TFA+LVS+ LYEKRFGP+F PV+AGL S KPFIC DS
Sbjct: 68 FRYKVNMYRLREERDISPRTFANLVSSSLYEKRFGPWFISPVVAGLDSKTGKPFICGFDS 127
Query: 126 IG 127
IG
Sbjct: 128 IG 129
>gi|296425517|ref|XP_002842287.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638550|emb|CAZ86478.1| unnamed protein product [Tuber melanosporum]
Length = 593
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 91/122 (74%), Gaps = 2/122 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A+VAMVGK+C AIA D RLG+Q T++ DF +I D +++GL+GLATD ++ +
Sbjct: 396 NGGAVVAMVGKDCVAIACDLRLGMQALTVSNDFPKIFNYGD-VYLGLTGLATDVTSVSEL 454
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
++ +Y+LREERD++P+T A+LVS+ LYEKRFGPYF PVIAG++ KPFIC DS
Sbjct: 455 FRYKVNMYRLREERDIEPQTMANLVSSSLYEKRFGPYFVSPVIAGINQHSGKPFICGFDS 514
Query: 126 IG 127
IG
Sbjct: 515 IG 516
>gi|320590790|gb|EFX03233.1| proteasome component [Grosmannia clavigera kw1407]
Length = 206
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 88/122 (72%), Gaps = 1/122 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGK+C AIA D RLG+Q T++ +F ++ + D +F+GL+GLATD T+
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKVFQYGDNVFLGLTGLATDVNTVSDL 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPFICTMDS 125
++ LY+LREER + P TFA+LVS+ LYE+RFGP+F PV+AGL + +PFIC DS
Sbjct: 68 FRYKVNLYRLREERHIAPRTFANLVSSSLYERRFGPFFVSPVVAGLEPKTGQPFICGFDS 127
Query: 126 IG 127
IG
Sbjct: 128 IG 129
>gi|327304369|ref|XP_003236876.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
gi|326459874|gb|EGD85327.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
Length = 214
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/124 (53%), Positives = 89/124 (71%), Gaps = 1/124 (0%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG A VAMVGK+C AIA D RLG+Q T++ +F +I ++GL+GLATD T+
Sbjct: 14 DINGGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFNYAPSTYLGLTGLATDVNTVS 73
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTM 123
Q L ++ LY+LREER++ P+T A+LVS+ LYEKRFGP+F PV+AG++ KPFIC
Sbjct: 74 QLLRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINHTTGKPFICGF 133
Query: 124 DSIG 127
DSIG
Sbjct: 134 DSIG 137
>gi|255950036|ref|XP_002565785.1| Pc22g18820 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592802|emb|CAP99170.1| Pc22g18820 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 206
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/124 (54%), Positives = 87/124 (70%), Gaps = 1/124 (0%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG A VAMVGK+C AIA D RLG+Q TI+ +F +I ++GL+GLATD T+
Sbjct: 6 DINGGACVAMVGKDCVAIACDLRLGMQSLTISNNFPKIFNYAPSTYLGLTGLATDVNTVS 65
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-DEDKPFICTM 123
++ +Y+LREERD+ P+T A+LVS+ LYEKRFGPYF PVIAG++ KPFIC
Sbjct: 66 DLFRYKVNMYRLREERDIAPQTLANLVSSSLYEKRFGPYFVSPVIAGINPTTGKPFICGF 125
Query: 124 DSIG 127
DSIG
Sbjct: 126 DSIG 129
>gi|326472712|gb|EGD96721.1| proteasome subunit beta type-3 [Trichophyton tonsurans CBS 112818]
gi|326482041|gb|EGE06051.1| proteasome component PUP3 [Trichophyton equinum CBS 127.97]
Length = 206
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/124 (53%), Positives = 89/124 (71%), Gaps = 1/124 (0%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG A VAMVGK+C AIA D RLG+Q T++ +F +I ++GL+GLATD T+
Sbjct: 6 DINGGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFNYAPSTYLGLTGLATDVNTVS 65
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTM 123
Q L ++ LY+LREER++ P+T A+LVS+ LYEKRFGP+F PV+AG++ KPFIC
Sbjct: 66 QLLRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINHTTGKPFICGF 125
Query: 124 DSIG 127
DSIG
Sbjct: 126 DSIG 129
>gi|388583046|gb|EIM23349.1| N-terminal nucleophile aminohydrolase [Wallemia sebi CBS 633.66]
Length = 205
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 89/128 (69%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG ++VAM GK C AIA D RLG + ++A +F+++ I +LF+GL GLA+D
Sbjct: 1 MSIMEYNGGSVVAMRGKKCVAIAGDLRLGNRNMSLAANFEKVFPITQKLFVGLPGLASDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-DEDKPF 119
TL FR +Y+L+E R+++P TFA LVS+ LYE+R+ PYF +PV+AGL + +PF
Sbjct: 61 LTLRDTFRFRTNMYKLKEGREIEPNTFAHLVSSTLYERRWSPYFVEPVVAGLDPNNGEPF 120
Query: 120 ICTMDSIG 127
I D IG
Sbjct: 121 IAATDLIG 128
>gi|121706806|ref|XP_001271634.1| proteasome component Pup3, putative [Aspergillus clavatus NRRL 1]
gi|119399782|gb|EAW10208.1| proteasome component Pup3, putative [Aspergillus clavatus NRRL 1]
Length = 206
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 66/124 (53%), Positives = 87/124 (70%), Gaps = 1/124 (0%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG A VAMVGK+C AIA D RLG+Q T++ +F +I F+GL+GLATD T+
Sbjct: 6 DINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYGPSTFLGLTGLATDVNTVS 65
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTM 123
F+ +Y+LREER++ P+T A+LVS+ LYE+RFGP+F PVIAG+ S KPFIC
Sbjct: 66 DLFRFKVNMYRLREERNIAPQTLANLVSSSLYERRFGPFFVSPVIAGVNSTTGKPFICGF 125
Query: 124 DSIG 127
DSIG
Sbjct: 126 DSIG 129
>gi|425781832|gb|EKV19776.1| hypothetical protein PDIG_01170 [Penicillium digitatum PHI26]
gi|425782962|gb|EKV20840.1| hypothetical protein PDIP_12490 [Penicillium digitatum Pd1]
Length = 206
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 66/124 (53%), Positives = 87/124 (70%), Gaps = 1/124 (0%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG A VAMVGK+C AIA D RLG+Q TI+ +F +I ++GL+GLATD T+
Sbjct: 6 DINGGACVAMVGKDCVAIACDLRLGMQALTISNNFPKIFNYAPSTYLGLTGLATDVNTVS 65
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTM 123
++ +Y+LREERD+ P+T A+LVS+ LYEKRFGPYF PV+AG++ KPFIC
Sbjct: 66 DLFRYKVNMYRLREERDIAPQTLANLVSSSLYEKRFGPYFVSPVLAGINPTTGKPFICGF 125
Query: 124 DSIG 127
DSIG
Sbjct: 126 DSIG 129
>gi|295672716|ref|XP_002796904.1| proteasome component PUP3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282276|gb|EEH37842.1| proteasome component PUP3 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 206
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 90/127 (70%), Gaps = 1/127 (0%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
S+ + NG A VAM+GK+C AIA D RLG+Q T++ +F +I ++GL+GLATD
Sbjct: 3 SVFDINGGACVAMIGKDCVAIACDLRLGLQALTVSNNFPKIFNYAPSTYLGLTGLATDVS 62
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFI 120
T+ L F+ +Y+LREER + P+T A+LVS+ LYEKRFGPYF PV+AG+++ +PFI
Sbjct: 63 TVSDVLRFKVNMYRLREERQISPQTLANLVSSSLYEKRFGPYFVSPVLAGINNTTGEPFI 122
Query: 121 CTMDSIG 127
C DSIG
Sbjct: 123 CGFDSIG 129
>gi|452837699|gb|EME39641.1| hypothetical protein DOTSEDRAFT_75329 [Dothistroma septosporum
NZE10]
Length = 206
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 89/122 (72%), Gaps = 1/122 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGK+C AIA D RLG+Q T++ +F ++ L++GL+GLATD ++ +
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKVFNYGPSLYLGLTGLATDVSSVSEL 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTMDS 125
++ +Y+LREERD+ P+TFA+LVS+ LYE+RFGP+F PV+AG++ KPFIC DS
Sbjct: 68 FRYKVNMYRLREERDIAPQTFANLVSSSLYERRFGPWFISPVVAGINHTTGKPFICGFDS 127
Query: 126 IG 127
IG
Sbjct: 128 IG 129
>gi|145256886|ref|XP_001401548.1| proteasome component PUP3 [Aspergillus niger CBS 513.88]
gi|134058458|emb|CAL00667.1| unnamed protein product [Aspergillus niger]
gi|358366039|dbj|GAA82660.1| proteasome component Pup3 [Aspergillus kawachii IFO 4308]
Length = 206
Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 66/124 (53%), Positives = 87/124 (70%), Gaps = 1/124 (0%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG A VAMVGK+C AIA D RLG+Q T++ +F +I F+GL+GLATD T+
Sbjct: 6 DINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYGPSTFLGLTGLATDVSTVS 65
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTM 123
++ +Y+LREER++ P+T A+LVS+ LYEKRFGP+F PVIAG+ S KPFIC
Sbjct: 66 DLFRYKVNMYRLREERNIAPQTLANLVSSSLYEKRFGPFFVSPVIAGINSTTGKPFICGF 125
Query: 124 DSIG 127
DSIG
Sbjct: 126 DSIG 129
>gi|195389042|ref|XP_002053187.1| GJ23747 [Drosophila virilis]
gi|194151273|gb|EDW66707.1| GJ23747 [Drosophila virilis]
Length = 208
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 61/127 (48%), Positives = 86/127 (67%), Gaps = 1/127 (0%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
YNG ++AM GK+C IA+DRR G+Q T D Q++ + RL++GL+GL TD T+Y
Sbjct: 9 YNGGCVIAMQGKDCIGIATDRRFGLQSHTAGEDCQKVFHLSPRLYLGLTGLQTDIMTVYN 68
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMD 124
RL++R +Y++ E R++ P+ L+S LLYE RFGP+F +PVIAGL E +P+IC MD
Sbjct: 69 RLLYRKNVYEINEGREVSPKVLTELLSHLLYEHRFGPFFVEPVIAGLDPETLEPYICCMD 128
Query: 125 SIGAKYV 131
IG V
Sbjct: 129 LIGCANV 135
>gi|389626557|ref|XP_003710932.1| proteasome component PUP3 [Magnaporthe oryzae 70-15]
gi|351650461|gb|EHA58320.1| proteasome component PUP3 [Magnaporthe oryzae 70-15]
Length = 206
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 86/122 (70%), Gaps = 1/122 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGK+C AIA D RLG+Q T++ +F +I +F+GL+GLATD T+
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFSYSSSVFLGLTGLATDVATVSDL 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPFICTMDS 125
++ +Y+LREER++ P TFA+LVS+ LYE+RFGPYF PV+AGL + PFIC DS
Sbjct: 68 FRYKVNMYRLREERNIAPRTFANLVSSSLYERRFGPYFVSPVVAGLEPKTGAPFICGFDS 127
Query: 126 IG 127
IG
Sbjct: 128 IG 129
>gi|83769195|dbj|BAE59332.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 203
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 64/126 (50%), Positives = 89/126 (70%), Gaps = 1/126 (0%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
++ +NG A VAMVGK+C AIA D RLG+Q T++ +F +I F+GL+GLATD T
Sbjct: 1 MSAHNGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYSPSTFLGLTGLATDVST 60
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFIC 121
+ ++ +Y+LREER++ P+T A+LVS+ LYE+RFGP+F PV+AG+ S KPFIC
Sbjct: 61 VSDLFRYKVNMYRLREERNIAPQTLANLVSSSLYERRFGPFFVSPVVAGINSTTGKPFIC 120
Query: 122 TMDSIG 127
DSIG
Sbjct: 121 GFDSIG 126
>gi|310793894|gb|EFQ29355.1| proteasome A-type and B-type [Glomerella graminicola M1.001]
Length = 205
Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 89/122 (72%), Gaps = 2/122 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGK+C AIA D RLG+Q T++ +F +I + D +F+GL+GLATD T+
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD-VFLGLTGLATDVTTVGDL 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPFICTMDS 125
++ +Y+LREER++ P TFA+LVS+ LYE+RFGPYF PV+AGL + KPFIC DS
Sbjct: 67 FRYKVNMYRLREERNIAPTTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDS 126
Query: 126 IG 127
IG
Sbjct: 127 IG 128
>gi|302925511|ref|XP_003054110.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735051|gb|EEU48397.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 205
Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 88/122 (72%), Gaps = 2/122 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGK+C AIA D RLG+Q T++ +F +I + D +F+GL+GLATD T+
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD-VFLGLTGLATDVNTVSDL 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPFICTMDS 125
++ +Y+LREER + P TFA+LVS+ LYE+RFGPYF PV+AGL + KPFIC DS
Sbjct: 67 FRYKTNMYRLREERAIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDS 126
Query: 126 IG 127
IG
Sbjct: 127 IG 128
>gi|380481881|emb|CCF41580.1| proteasome component PUP3 [Colletotrichum higginsianum]
Length = 205
Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 102/157 (64%), Gaps = 9/157 (5%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGK+C AIA D RLG+Q T++ +F +I + D +F+GL+GLATD T+
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD-VFLGLTGLATDVTTVGDL 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPFICTMDS 125
++ +Y+LREER++ P TFA+LVS+ LYE+RFGPYF PV+AGL + KPFIC DS
Sbjct: 67 FRYKVNMYRLREERNIAPTTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDS 126
Query: 126 IGAKYVGSLQKILLLLELLESLFMVPVRQCSSLIWNP 162
IG + + ++ E LF + C SL W P
Sbjct: 127 IGC--IDFAKDFIVSGTASEQLFGM----CESL-WEP 156
>gi|189205423|ref|XP_001939046.1| proteasome subunit beta type-3 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187975139|gb|EDU41765.1| proteasome subunit beta type-3 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 205
Score = 135 bits (340), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 89/122 (72%), Gaps = 2/122 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGK+C AIA D RLG+Q T++ +F +I + D +F+GL+GLATD T+
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFQYGD-VFLGLTGLATDVSTVSDL 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTMDS 125
++ +Y+LREER++ P+T A+LVS+ LYEKRFGPYF PVIAG++ KPFIC DS
Sbjct: 67 FRYKVNMYRLREERNISPQTMANLVSSSLYEKRFGPYFISPVIAGINQTSGKPFICGFDS 126
Query: 126 IG 127
IG
Sbjct: 127 IG 128
>gi|345567463|gb|EGX50395.1| hypothetical protein AOL_s00076g159 [Arthrobotrys oligospora ATCC
24927]
Length = 205
Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 89/122 (72%), Gaps = 2/122 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A +AM GK+C AIA D RLG Q T++ +F +I D +F+GL+GLATD QT++
Sbjct: 8 NGGACLAMAGKDCVAIACDLRLGQQALTLSNNFPKIFNYGD-VFLGLTGLATDVQTMHSL 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPFICTMDS 125
++ LY+LREER+++PET A+LVS+ LYE+RFGPYF PV+AG++ KPFIC DS
Sbjct: 67 FRYKVNLYRLREEREIEPETMANLVSSSLYERRFGPYFVSPVVAGINQRTGKPFICGFDS 126
Query: 126 IG 127
IG
Sbjct: 127 IG 128
>gi|402077481|gb|EJT72830.1| proteasome component PUP3 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 205
Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 89/122 (72%), Gaps = 2/122 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGK+C AIA D RLG+Q T++ +F +I + D +F+GL+GLATD T+
Sbjct: 8 NGGAAVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFQYGD-VFLGLTGLATDVSTVSDL 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPFICTMDS 125
++ +Y+LREER++ P TFA+LVS+ LYE+RFGPYF PV+AGL + +PFIC DS
Sbjct: 67 FRYKVNMYRLREERNIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTSQPFICGFDS 126
Query: 126 IG 127
IG
Sbjct: 127 IG 128
>gi|358391261|gb|EHK40665.1| beta subunit Pup3 of the 20S proteasome [Trichoderma atroviride IMI
206040]
Length = 205
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 68/122 (55%), Positives = 88/122 (72%), Gaps = 2/122 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGK+C AIA D RLG+Q TI+ +F +I + D +F+GL+GLATD T+
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGLQALTISNNFPKIFQYGD-VFLGLTGLATDVSTVSDL 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPFICTMDS 125
++ +Y+LREER + P TFA+LVS+ LYE+RFGPYF PV+AGL + KPFIC DS
Sbjct: 67 FRYKVNMYRLREERAIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDS 126
Query: 126 IG 127
IG
Sbjct: 127 IG 128
>gi|171696000|ref|XP_001912924.1| hypothetical protein [Podospora anserina S mat+]
gi|170948242|emb|CAP60406.1| unnamed protein product [Podospora anserina S mat+]
Length = 203
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 101/157 (64%), Gaps = 8/157 (5%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
+G A VAMVGK+C AIA D RLG+Q T++ +F +I + D +F+GL+GLATD T+
Sbjct: 5 DGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGDNVFLGLTGLATDVATVSDL 64
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPFICTMDS 125
++ +Y+LREER + P TFA+LVS+ LYE+RFGP+F PV+AGL + +PFIC DS
Sbjct: 65 FRYKVNMYRLREERQIAPRTFANLVSSSLYERRFGPWFVSPVVAGLDPKTGQPFICGFDS 124
Query: 126 IGAKYVGSLQKILLLLELLESLFMVPVRQCSSLIWNP 162
IG + + ++ E LF + C SL W P
Sbjct: 125 IGC--IDFAKDFIVSGTATEQLFGM----CESL-WEP 154
>gi|358378900|gb|EHK16581.1| hypothetical protein TRIVIDRAFT_183933 [Trichoderma virens Gv29-8]
Length = 205
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 68/122 (55%), Positives = 88/122 (72%), Gaps = 2/122 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGK+C AIA D RLG+Q TI+ +F +I + D +F+GL+GLATD T+
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGLQALTISNNFPKIFQYGD-VFLGLTGLATDVSTVSDL 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPFICTMDS 125
++ +Y+LREER + P TFA+LVS+ LYE+RFGPYF PV+AGL + KPFIC DS
Sbjct: 67 FRYKVNMYRLREERAIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDS 126
Query: 126 IG 127
IG
Sbjct: 127 IG 128
>gi|346978239|gb|EGY21691.1| proteasome component PUP3 [Verticillium dahliae VdLs.17]
Length = 222
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 89/122 (72%), Gaps = 2/122 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
+G A VAMVGK+C AIA D RLG+Q T++ +F +I + D +F+GL+GLATD T+
Sbjct: 36 DGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD-VFLGLTGLATDVTTVGDL 94
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPFICTMDS 125
++ +Y+LREER++ P TFA+LVS+ LYE+RFGPYF PV+AGL + KPFIC DS
Sbjct: 95 FRYKSNMYRLREERNIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDS 154
Query: 126 IG 127
IG
Sbjct: 155 IG 156
>gi|358057136|dbj|GAA97043.1| hypothetical protein E5Q_03718 [Mixia osmundae IAM 14324]
Length = 204
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 101/162 (62%), Gaps = 7/162 (4%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MS E NG +++AM+GK+C AIA D RLG Q T+A + ++I I ++GL GLA+D+
Sbjct: 1 MSAMEINGGSVIAMLGKDCVAIACDLRLGNQALTVACNQEKIFSITPTTYLGLPGLASDT 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
T+Y++L R +Y +RE+R + P TF LVS+ LYE+RFGPYF +P+IAGL + PF+
Sbjct: 61 LTVYEKLRHRTNMYAMREDRLITPTTFTHLVSSTLYERRFGPYFIEPIIAGLEADGTPFV 120
Query: 121 CTMDSIGAKYVGSLQKILLLLELLESLFMVPVRQCSSLIWNP 162
T D IG + + + ++ E L+ + S +W P
Sbjct: 121 ATTDLIGC--INAAKDFVVAGTASEKLYGM-----SEALWEP 155
>gi|315045460|ref|XP_003172105.1| proteasome component PUP3 [Arthroderma gypseum CBS 118893]
gi|311342491|gb|EFR01694.1| proteasome component PUP3 [Arthroderma gypseum CBS 118893]
Length = 212
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 88/122 (72%), Gaps = 1/122 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
+G A VAMVGK+C AIA D RLG+Q T++ +F +I ++GL+GLATD T+ Q
Sbjct: 14 DGGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFNYAPSTYLGLTGLATDVNTVSQL 73
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTMDS 125
L ++ LY+LREER++ P+T A+LVS+ LYEKRFGP+F PV+AG++ KPFIC DS
Sbjct: 74 LRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINHTTGKPFICGFDS 133
Query: 126 IG 127
IG
Sbjct: 134 IG 135
>gi|398394287|ref|XP_003850602.1| proteasome core particle subunit beta 3 [Zymoseptoria tritici
IPO323]
gi|339470481|gb|EGP85578.1| hypothetical protein MYCGRDRAFT_105064 [Zymoseptoria tritici
IPO323]
Length = 206
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 88/122 (72%), Gaps = 1/122 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGK+C AIA D RLG+Q T++ +F +I +++GL+GLATD ++ +
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFSYGSSVYLGLTGLATDVSSVSEL 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTMDS 125
++ +Y+LREERD+ P+TF++LVS+ LYE+RFGP+F PV+AG+ KPFIC DS
Sbjct: 68 FRYKVNMYRLREERDISPKTFSNLVSSSLYERRFGPWFVSPVVAGIDGTSGKPFICGFDS 127
Query: 126 IG 127
IG
Sbjct: 128 IG 129
>gi|302662910|ref|XP_003023105.1| hypothetical protein TRV_02795 [Trichophyton verrucosum HKI 0517]
gi|291187083|gb|EFE42487.1| hypothetical protein TRV_02795 [Trichophyton verrucosum HKI 0517]
Length = 212
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 88/122 (72%), Gaps = 1/122 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
+G A VAMVGK+C AIA D RLG+Q T++ +F +I ++GL+GLATD T+ Q
Sbjct: 14 DGGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFNYAPSTYLGLTGLATDVNTVSQL 73
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTMDS 125
L ++ LY+LREER++ P+T A+LVS+ LYEKRFGP+F PV+AG++ KPFIC DS
Sbjct: 74 LRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINHTTGKPFICGFDS 133
Query: 126 IG 127
IG
Sbjct: 134 IG 135
>gi|302501602|ref|XP_003012793.1| hypothetical protein ARB_01044 [Arthroderma benhamiae CBS 112371]
gi|291176353|gb|EFE32153.1| hypothetical protein ARB_01044 [Arthroderma benhamiae CBS 112371]
Length = 212
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 88/122 (72%), Gaps = 1/122 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
+G A VAMVGK+C AIA D RLG+Q T++ +F +I ++GL+GLATD T+ Q
Sbjct: 14 DGGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFNYAPSTYLGLTGLATDVNTVSQL 73
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTMDS 125
L ++ LY+LREER++ P+T A+LVS+ LYEKRFGP+F PV+AG++ KPFIC DS
Sbjct: 74 LRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINHTTGKPFICGFDS 133
Query: 126 IG 127
IG
Sbjct: 134 IG 135
>gi|238491746|ref|XP_002377110.1| proteasome component Pup3, putative [Aspergillus flavus NRRL3357]
gi|317146166|ref|XP_001821334.2| proteasome component PUP3 [Aspergillus oryzae RIB40]
gi|220697523|gb|EED53864.1| proteasome component Pup3, putative [Aspergillus flavus NRRL3357]
gi|391869220|gb|EIT78422.1| 20S proteasome, regulatory subunit beta type PSMB3/PUP3
[Aspergillus oryzae 3.042]
Length = 206
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/124 (51%), Positives = 87/124 (70%), Gaps = 1/124 (0%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG A VAMVGK+C AIA D RLG+Q T++ +F +I F+GL+GLATD T+
Sbjct: 6 DINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYSPSTFLGLTGLATDVSTVS 65
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTM 123
++ +Y+LREER++ P+T A+LVS+ LYE+RFGP+F PV+AG+ S KPFIC
Sbjct: 66 DLFRYKVNMYRLREERNIAPQTLANLVSSSLYERRFGPFFVSPVVAGINSTTGKPFICGF 125
Query: 124 DSIG 127
DSIG
Sbjct: 126 DSIG 129
>gi|451848501|gb|EMD61806.1| hypothetical protein COCSADRAFT_38618 [Cochliobolus sativus ND90Pr]
Length = 205
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 89/122 (72%), Gaps = 2/122 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGK+C AIA D RLG+Q T++ +F +I + D +F+GL+GLATD T+
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFQYGD-VFLGLTGLATDVSTVSDL 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTMDS 125
++ +Y+LREER++ P+T A+LVS+ LYE+RFGPYF PVIAG++ KPFIC DS
Sbjct: 67 FRYKVNMYRLREERNISPQTMANLVSSSLYERRFGPYFISPVIAGINQTSGKPFICGFDS 126
Query: 126 IG 127
IG
Sbjct: 127 IG 128
>gi|255731824|ref|XP_002550836.1| proteasome component PUP3 [Candida tropicalis MYA-3404]
gi|240131845|gb|EER31404.1| proteasome component PUP3 [Candida tropicalis MYA-3404]
Length = 206
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 88/122 (72%), Gaps = 1/122 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAM+GK C AIASD RLG Q ++ +F++I +I + ++GL+GLA+D TL +
Sbjct: 8 NGGAAVAMIGKECIAIASDLRLGQQSLGVSNNFEKIFEISPKTYLGLTGLASDVLTLKEL 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
F+ LY+LRE+ ++P T A+L+S+ LYE+RFGP+F P++AGL S +KPFIC DS
Sbjct: 68 FRFKTNLYKLREDHSIEPSTLANLISSSLYERRFGPWFVSPIVAGLDSKTNKPFICGFDS 127
Query: 126 IG 127
IG
Sbjct: 128 IG 129
>gi|296805183|ref|XP_002843416.1| proteasome component PUP3 [Arthroderma otae CBS 113480]
gi|238844718|gb|EEQ34380.1| proteasome component PUP3 [Arthroderma otae CBS 113480]
Length = 223
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 88/122 (72%), Gaps = 1/122 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
+G A VAMVGK+C AIA D RLG+Q T++ +F +I ++GL+GLATD T+ Q
Sbjct: 25 DGGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFNYAPSTYLGLTGLATDVNTVSQL 84
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTMDS 125
L ++ LY+LREER++ P+T A+LVS+ LYEKRFGP+F PV+AG++ KPF+C DS
Sbjct: 85 LRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINHTTGKPFVCGFDS 144
Query: 126 IG 127
IG
Sbjct: 145 IG 146
>gi|449295365|gb|EMC91387.1| hypothetical protein BAUCODRAFT_39558 [Baudoinia compniacensis UAMH
10762]
Length = 206
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 86/122 (70%), Gaps = 1/122 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAM GKNC AIA D RLG+Q T++ +F +I + F+GL+GLATD T+ +
Sbjct: 8 NGGACVAMRGKNCVAIACDLRLGLQSLTVSNNFPKIFQYSPTAFLGLTGLATDVSTVSEL 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
++ +Y+LREERD+ P+TFA LVS+ LYE+RFGP+F PV+AG+ + PFIC DS
Sbjct: 68 FRYKVNMYRLREERDIAPKTFAQLVSSSLYERRFGPWFVSPVVAGIDGKSGAPFICGFDS 127
Query: 126 IG 127
IG
Sbjct: 128 IG 129
>gi|260946487|ref|XP_002617541.1| proteasome component PUP3 [Clavispora lusitaniae ATCC 42720]
gi|238849395|gb|EEQ38859.1| proteasome component PUP3 [Clavispora lusitaniae ATCC 42720]
Length = 192
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/115 (55%), Positives = 83/115 (72%), Gaps = 1/115 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK C AIA D RLG Q +A +F++I + D+ F+GL+GLATD TL + +H L
Sbjct: 1 MVGKECIAIACDLRLGNQSLGVANNFEKIFQFGDKTFLGLTGLATDVLTLKEDFRLKHNL 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDSIG 127
Y+LREER+++P T A+LVS+ LYEKRFGPYF P++AGL S +KPFIC D IG
Sbjct: 61 YKLREEREIEPRTLANLVSSSLYEKRFGPYFVGPIVAGLESKTNKPFICGFDLIG 115
>gi|407921624|gb|EKG14765.1| Proteasome subunit alpha/beta [Macrophomina phaseolina MS6]
Length = 205
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 88/122 (72%), Gaps = 2/122 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGK+C AIA D RLG+Q T++ +F +I D +++GL+GLATD T+
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFSYGD-VYLGLTGLATDVSTVADL 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTMDS 125
++ +Y+LREER++ P+T A+LVS+ LYE+RFGPYF PVIAG++ KPFIC DS
Sbjct: 67 FRYKVNMYRLREERNISPQTMANLVSSSLYERRFGPYFVSPVIAGINQTTGKPFICGFDS 126
Query: 126 IG 127
IG
Sbjct: 127 IG 128
>gi|335345796|gb|AEH41478.1| proteasome component Pup3 [Endocarpon pusillum]
Length = 206
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/124 (51%), Positives = 87/124 (70%), Gaps = 1/124 (0%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG A VAMVGK C AIA D RLG+Q T++ +F +I + ++GL+GLATD T+
Sbjct: 6 DINGGACVAMVGKGCVAIACDLRLGLQSLTVSNNFPKIFQYAPSCYLGLTGLATDVSTVS 65
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTM 123
+R +Y+LREER++ P+T A+LVS+ LYE+RFGPYF PV+AG++ KPFIC
Sbjct: 66 DLFRYRVNMYRLREERNISPQTLANLVSSSLYERRFGPYFVSPVLAGINHTTGKPFICGF 125
Query: 124 DSIG 127
DSIG
Sbjct: 126 DSIG 129
>gi|156036470|ref|XP_001586346.1| hypothetical protein SS1G_12924 [Sclerotinia sclerotiorum 1980]
gi|154698329|gb|EDN98067.1| hypothetical protein SS1G_12924 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 206
Score = 132 bits (332), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 86/122 (70%), Gaps = 1/122 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGK+C AIA D RLG+Q T++ +F +I +++GL+GLATD T+
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFSYGPSVYLGLTGLATDVSTVSDL 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPFICTMDS 125
++ +Y+LREER++ P T A+LVS+ LYE+RFGP+F PVIAGL + KPFIC DS
Sbjct: 68 FRYKVNMYRLREERNISPTTMANLVSSSLYERRFGPFFVSPVIAGLDQKTGKPFICGFDS 127
Query: 126 IG 127
IG
Sbjct: 128 IG 129
>gi|451992642|gb|EMD85122.1| hypothetical protein COCHEDRAFT_1149474 [Cochliobolus
heterostrophus C5]
Length = 205
Score = 132 bits (332), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 89/122 (72%), Gaps = 2/122 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
+G A VAMVGK+C AIA D RLG+Q T++ +F +I + D +F+GL+GLATD T+
Sbjct: 8 DGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFQYGD-VFLGLTGLATDVSTVSDL 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTMDS 125
++ +Y+LREER++ P+T A+LVS+ LYE+RFGPYF PVIAG++ KPFIC DS
Sbjct: 67 FRYKVNMYRLREERNISPQTMANLVSSSLYERRFGPYFISPVIAGINQTSGKPFICGFDS 126
Query: 126 IG 127
IG
Sbjct: 127 IG 128
>gi|406868327|gb|EKD21364.1| proteasome subunit beta type-3 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 212
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 87/122 (71%), Gaps = 2/122 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGK+C AIA D RLG+Q T++ +F +I D +++GL+GLATD T+
Sbjct: 15 NGGACVAMVGKDCVAIACDLRLGLQSLTVSNNFPKIFSYGD-VYLGLTGLATDVSTVSDL 73
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
++ +Y+LREER++ P T A+LVS+ LYEKRFGPYF PV+AG+ + KPFIC DS
Sbjct: 74 FRYKVNMYRLREERNISPSTMANLVSSSLYEKRFGPYFVSPVVAGIDQKSGKPFICGFDS 133
Query: 126 IG 127
IG
Sbjct: 134 IG 135
>gi|212537589|ref|XP_002148950.1| proteasome component Pup3, putative [Talaromyces marneffei ATCC
18224]
gi|210068692|gb|EEA22783.1| proteasome component Pup3, putative [Talaromyces marneffei ATCC
18224]
Length = 171
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 63/124 (50%), Positives = 86/124 (69%), Gaps = 1/124 (0%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG A VAMVGK+C AIA D RLG+Q T++ +F +I ++G++GLATD T+
Sbjct: 6 DINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYAPSTYLGITGLATDVTTVS 65
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTM 123
++ +Y+LREER + P+T A+LVS+ LYE+RFGPYF PVIAG++ KPFIC
Sbjct: 66 DLFRYKVNMYRLREERHISPQTLANLVSSSLYERRFGPYFVSPVIAGINHTTGKPFICGF 125
Query: 124 DSIG 127
DSIG
Sbjct: 126 DSIG 129
>gi|347826593|emb|CCD42290.1| similar to proteasome subunit beta type-3 [Botryotinia fuckeliana]
Length = 212
Score = 132 bits (331), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 86/122 (70%), Gaps = 1/122 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGK+C AIA D RLG+Q T++ +F +I +++GL+GLATD T+
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFSYGPSVYLGLTGLATDVSTVSDL 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPFICTMDS 125
++ +Y+LREER++ P T A+LVS+ LYE+RFGP+F PV+AGL + KPFIC DS
Sbjct: 68 FRYKVNMYRLREERNISPTTMANLVSSSLYERRFGPFFVSPVVAGLDQKTGKPFICGFDS 127
Query: 126 IG 127
IG
Sbjct: 128 IG 129
>gi|242808757|ref|XP_002485230.1| proteasome component Pup3, putative [Talaromyces stipitatus ATCC
10500]
gi|218715855|gb|EED15277.1| proteasome component Pup3, putative [Talaromyces stipitatus ATCC
10500]
Length = 206
Score = 132 bits (331), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 64/124 (51%), Positives = 86/124 (69%), Gaps = 1/124 (0%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG A VAMVGK+C AIA D RLG+Q T++ +F +I ++GL+GLATD T+
Sbjct: 6 DINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYAPSTYLGLTGLATDVTTVS 65
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTM 123
++ +Y+LREER + P+T A+LVS+ LYE+RFGPYF PVIAG++ KPFIC
Sbjct: 66 DLFRYKVNMYRLREERHISPQTLANLVSSSLYERRFGPYFVSPVIAGINHTTGKPFICGF 125
Query: 124 DSIG 127
DSIG
Sbjct: 126 DSIG 129
>gi|71650132|ref|XP_813770.1| proteasome beta 3 subunit [Trypanosoma cruzi strain CL Brener]
gi|71653810|ref|XP_815536.1| proteasome beta 3 subunit [Trypanosoma cruzi strain CL Brener]
gi|70878686|gb|EAN91919.1| proteasome beta 3 subunit, putative [Trypanosoma cruzi]
gi|70880598|gb|EAN93685.1| proteasome beta 3 subunit, putative [Trypanosoma cruzi]
Length = 205
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 93/129 (72%), Gaps = 1/129 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI Y+G + +AM G CF I SD RLG QL+TI+ + ++ I++ + +GL+GL TD
Sbjct: 1 MSILTYSGGSCLAMAGDGCFVIVSDNRLGEQLKTISMEVPKLHVINESIVLGLTGLRTDQ 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPF 119
QT +++ FR++LY+LREER++ + FA+L+S++LYE RFGP+F +PVIA + + + +
Sbjct: 61 QTFSEKVRFRNELYKLREEREIGGKAFAALISSMLYEARFGPWFVEPVIASIDKKTGEVY 120
Query: 120 ICTMDSIGA 128
+C MD IGA
Sbjct: 121 LCAMDLIGA 129
>gi|17380264|sp|Q9NDA1.1|PSB3_TRYBB RecName: Full=Proteasome subunit beta type-3; AltName: Full=20S
proteasome subunit beta-3
gi|9622232|gb|AAF89685.1|AF169653_1 20S proteasome beta 3 subunit [Trypanosoma brucei]
gi|261334718|emb|CBH17712.1| proteasome beta 3 subunit, putative [Trypanosoma brucei gambiense
DAL972]
Length = 205
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 91/129 (70%), Gaps = 1/129 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI Y+G + +AM GK CF + SD RLG QL+TI+ + ++ I+D + +GL+GL TD
Sbjct: 1 MSILTYSGGSCLAMAGKECFVVISDNRLGEQLKTISMEVPKLHVINDGIVMGLTGLRTDQ 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPF 119
QT Q++ FR ++Y+LREERD+ + FA+LVS++LYE RFGP+F +PVI + + + +
Sbjct: 61 QTFAQKVNFRTEMYKLREERDINGKAFAALVSSMLYEARFGPWFVEPVIGTIDRKTGEVY 120
Query: 120 ICTMDSIGA 128
+C D IGA
Sbjct: 121 LCATDLIGA 129
>gi|119175342|ref|XP_001239915.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|303314835|ref|XP_003067426.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240107094|gb|EER25281.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|320037775|gb|EFW19712.1| proteasome component PUP3 [Coccidioides posadasii str. Silveira]
gi|392870109|gb|EAS27268.2| proteasome component PUP3 [Coccidioides immitis RS]
Length = 206
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/124 (51%), Positives = 87/124 (70%), Gaps = 1/124 (0%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG A VAMVGK+C AIA D RLG+Q T++ +F +I ++GL+GLATD ++
Sbjct: 6 DINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYAPSTYLGLTGLATDVASVS 65
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTM 123
L ++ LY+LREER + P+T A+LVS+ LYEKRFGP+F PV+AG++ KPFIC
Sbjct: 66 DLLRYKVNLYRLREERQIAPQTLANLVSSSLYEKRFGPWFVSPVLAGINHTTGKPFICGF 125
Query: 124 DSIG 127
DSIG
Sbjct: 126 DSIG 129
>gi|407859760|gb|EKG07148.1| proteasome beta 3 subunit, putative [Trypanosoma cruzi]
Length = 205
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 92/129 (71%), Gaps = 1/129 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI Y+G + +AM G CF I SD RLG QL+TI+ + ++ I++ + +GL+GL TD
Sbjct: 1 MSILTYSGGSCLAMAGDGCFVIVSDNRLGEQLKTISMEVPKLHVINESIVLGLTGLRTDQ 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPF 119
QT +++ FR++LY+LREER++ + FA+LVS++LYE RFGP+F +PVIA + + +
Sbjct: 61 QTFSEKVRFRNELYKLREEREIGGKAFAALVSSMLYEARFGPWFVEPVIASIDKRTGEVY 120
Query: 120 ICTMDSIGA 128
+C MD IGA
Sbjct: 121 LCAMDLIGA 129
>gi|406603265|emb|CCH45193.1| Proteasome component [Wickerhamomyces ciferrii]
Length = 210
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/121 (52%), Positives = 89/121 (73%), Gaps = 2/121 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G ++VAMVGK+C AIASD RLG Q ++ F+++ + +++GL+GLATD+ TL +
Sbjct: 14 GGSVVAMVGKDCVAIASDLRLGNQSLGLSNKFEKVYN-YGHVYLGLTGLATDAITLSEVF 72
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTMDSI 126
++ LY+LREER ++PE+FA+LVS+ LYEKRFGPYF PV+AG++ KPFIC D I
Sbjct: 73 RYKTNLYKLREERQIEPESFANLVSSTLYEKRFGPYFIGPVVAGINSITSKPFICGFDLI 132
Query: 127 G 127
G
Sbjct: 133 G 133
>gi|401424718|ref|XP_003876844.1| putative proteasome beta 3 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322493088|emb|CBZ28372.1| putative proteasome beta 3 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 205
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI Y+G +++AM GK CF I SD+RLG QL+TI+T+ ++ ++D + GL+GL TD
Sbjct: 1 MSIMSYSGGSVMAMAGKECFVIISDKRLGEQLKTISTEVPKLHVVNDSIVYGLTGLRTDQ 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPF 119
QT ++ FR +Y+LREER++ + F+S+++++LYE RFGP+F +PVI + K +
Sbjct: 61 QTFVNKVQFRTDMYKLREERNITGKAFSSMITSMLYEARFGPWFVEPVIGSIDKSTGKVY 120
Query: 120 ICTMDSIGA 128
+C D IGA
Sbjct: 121 LCATDLIGA 129
>gi|212537585|ref|XP_002148948.1| proteasome component Pup3, putative [Talaromyces marneffei ATCC
18224]
gi|210068690|gb|EEA22781.1| proteasome component Pup3, putative [Talaromyces marneffei ATCC
18224]
Length = 206
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/124 (50%), Positives = 86/124 (69%), Gaps = 1/124 (0%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG A VAMVGK+C AIA D RLG+Q T++ +F +I ++G++GLATD T+
Sbjct: 6 DINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYAPSTYLGITGLATDVTTVS 65
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTM 123
++ +Y+LREER + P+T A+LVS+ LYE+RFGPYF PVIAG++ KPFIC
Sbjct: 66 DLFRYKVNMYRLREERHISPQTLANLVSSSLYERRFGPYFVSPVIAGINHTTGKPFICGF 125
Query: 124 DSIG 127
DSIG
Sbjct: 126 DSIG 129
>gi|146091504|ref|XP_001470046.1| putative proteasome beta 3 subunit [Leishmania infantum JPCM5]
gi|398017851|ref|XP_003862112.1| proteasome beta 3 subunit, putative [Leishmania donovani]
gi|134084840|emb|CAM69238.1| putative proteasome beta 3 subunit [Leishmania infantum JPCM5]
gi|322500341|emb|CBZ35418.1| proteasome beta 3 subunit, putative [Leishmania donovani]
Length = 205
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI Y+G +++AM GK CF I SD+RLG QL+TI+T+ ++ ++D + GL+GL TD
Sbjct: 1 MSIMSYSGGSVMAMAGKECFVIISDKRLGEQLKTISTEVPKLHVVNDSIVYGLTGLRTDQ 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPF 119
QT ++ FR +Y+LREERD+ + FA++++++LYE RFGP+F +PVI + + +
Sbjct: 61 QTFANKVQFRTDMYKLREERDITGKAFAAMITSMLYEARFGPWFVEPVIGSIDKSTGEVY 120
Query: 120 ICTMDSIGA 128
+C D IGA
Sbjct: 121 LCATDLIGA 129
>gi|71755781|ref|XP_828805.1| proteasome subunit beta 3 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70834191|gb|EAN79693.1| proteasome beta 3 subunit, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 205
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 91/129 (70%), Gaps = 1/129 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI Y+G + +AM GK CF + SD RLG QL+TI+ + ++ I+D + +GL+GL TD
Sbjct: 1 MSILTYSGGSCLAMAGKECFVVISDNRLGEQLKTISMEVPKLYVINDGIVMGLTGLRTDQ 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPF 119
QT Q++ FR ++Y+LREERD+ + FA+LVS++LYE RFGP+F +PVI + + + +
Sbjct: 61 QTFAQKVNFRTEMYKLREERDINGKAFAALVSSMLYEARFGPWFVEPVIGTIDRKTGEVY 120
Query: 120 ICTMDSIGA 128
+C D IGA
Sbjct: 121 LCATDLIGA 129
>gi|407424924|gb|EKF39197.1| proteasome beta 3 subunit, putative [Trypanosoma cruzi marinkellei]
Length = 205
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI Y+G + +AM G CF I SD RLG QL+TI+ + ++ I+D + +GL+GL TD
Sbjct: 1 MSILTYSGGSCLAMAGDGCFVIVSDNRLGEQLKTISMEVPKLHVINDNIVLGLTGLRTDQ 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPF 119
QT +++ FR +LY+LREER++ + FA+L+S++LYE RFGP+F +PVI + + +
Sbjct: 61 QTFSEKVHFRTELYKLREEREIGGKAFAALISSMLYEARFGPWFVEPVIGSIDKRTGEVY 120
Query: 120 ICTMDSIGA 128
+C MD IGA
Sbjct: 121 LCAMDLIGA 129
>gi|297790070|ref|XP_002862946.1| hypothetical protein ARALYDRAFT_920955 [Arabidopsis lyrata subsp.
lyrata]
gi|297308728|gb|EFH39205.1| hypothetical protein ARALYDRAFT_920955 [Arabidopsis lyrata subsp.
lyrata]
Length = 116
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/141 (53%), Positives = 82/141 (58%), Gaps = 40/141 (28%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
+ I EYN SA+ AM GKNCFAIASD+R GVQLQTI
Sbjct: 6 IQIFEYNESAVDAMEGKNCFAIASDQRHGVQLQTI------------------------- 40
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
LREERD+KPETFASLVSA+LYEKRFGPY CQ VIA L D++KPF
Sbjct: 41 ---------------LREERDIKPETFASLVSAILYEKRFGPYLCQLVIAELRDDNKPFT 85
Query: 121 CTMDSIGAKYVGSLQKILLLL 141
CTMDSI AKY L LLL
Sbjct: 86 CTMDSIAAKYAHFLYLPSLLL 106
>gi|440636325|gb|ELR06244.1| proteasome component PUP3 [Geomyces destructans 20631-21]
Length = 205
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 87/122 (71%), Gaps = 2/122 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAMVGK+C AIA D RLG+Q T++ +F ++ D +++GL+GLATD T+
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGLQSLTVSNNFPKVFNYGD-VYLGLTGLATDVATVSDL 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDK-PFICTMDS 125
++ +Y+LREER++ P TFA+LVS+ LYEKRFGP+F PV+AGL + PFIC DS
Sbjct: 67 FRYKVNMYRLREERNIAPSTFANLVSSSLYEKRFGPFFVSPVVAGLDPKTGIPFICGFDS 126
Query: 126 IG 127
IG
Sbjct: 127 IG 128
>gi|312067975|ref|XP_003136996.1| proteasome subunit beta type 3 [Loa loa]
Length = 192
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 83/115 (72%), Gaps = 1/115 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
M G +C IASD RLG Q+ TIAT+ +++ K+ ++++IGL G +D++T+ ++ FR L
Sbjct: 1 MAGNDCVCIASDLRLGEQMTTIATNMKKVHKLGEKVYIGLGGFHSDAKTVLDKITFRKNL 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-DEDKPFICTMDSIG 127
Y+LRE R +KPE A +VS LLY+ RFG YF +P+IAGL +KP+IC MD+IG
Sbjct: 61 YELRENRKIKPEVAAVMVSNLLYQHRFGGYFTEPLIAGLDPTTNKPYICAMDTIG 115
>gi|390369126|ref|XP_001197881.2| PREDICTED: proteasome subunit beta type-3-like
[Strongylocentrotus purpuratus]
Length = 99
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/99 (62%), Positives = 76/99 (76%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNGSA+VAM+GK+C IASDRR GVQ QT++ + Q+I + RL++GLSGLATD
Sbjct: 1 MSIMSYNGSAVVAMIGKDCVGIASDRRFGVQAQTVSMNAQKIFTMGPRLYLGLSGLATDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKR 99
T+ RL FR LY LRE RD+KPETF S+VS LLYE+R
Sbjct: 61 TTVSNRLKFRLNLYTLRENRDVKPETFMSMVSNLLYERR 99
>gi|46108708|ref|XP_381412.1| hypothetical protein FG01236.1 [Gibberella zeae PH-1]
gi|408398859|gb|EKJ77985.1| hypothetical protein FPSE_01773 [Fusarium pseudograminearum CS3096]
Length = 191
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/115 (55%), Positives = 84/115 (73%), Gaps = 2/115 (1%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ DF +I + D +F+GL+GLATD T+ ++ +
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNDFPKIFQYGD-VFLGLTGLATDVNTVSDLFRYKVNM 59
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPFICTMDSIG 127
Y+LREERD+ P TFA+LVS+ LYE+RFGPYF PV+AGL + KPFIC DSIG
Sbjct: 60 YRLREERDIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDSIG 114
>gi|148684144|gb|EDL16091.1| mCG13231, isoform CRA_a [Mus musculus]
Length = 112
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/99 (61%), Positives = 76/99 (76%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKR 99
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKR
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKR 99
>gi|157871480|ref|XP_001684289.1| putative proteasome beta 3 subunit [Leishmania major strain
Friedlin]
gi|68127358|emb|CAJ04676.1| putative proteasome beta 3 subunit [Leishmania major strain
Friedlin]
Length = 205
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI Y+G +++AM GK CF I SD+RLG QL+TI+T+ ++ +++ + GL+GL TD
Sbjct: 1 MSIMSYSGGSVMAMAGKECFVIISDKRLGEQLKTISTEVPKLHVVNNSIVYGLTGLRTDQ 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPF 119
QT ++ FR +Y+LREERD+ + FA++++++LYE RFGP+F +PVI + + +
Sbjct: 61 QTFANKVQFRTDMYKLREERDITGKAFAAMITSMLYEARFGPWFVEPVIGSIDKSTGEVY 120
Query: 120 ICTMDSIGA 128
+C D IGA
Sbjct: 121 LCATDLIGA 129
>gi|149054058|gb|EDM05875.1| rCG33987, isoform CRA_b [Rattus norvegicus]
Length = 112
Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 60/99 (60%), Positives = 76/99 (76%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MS+ YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSVMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKR 99
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKR
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKR 99
>gi|410051479|ref|XP_511441.4| PREDICTED: proteasome subunit beta type-3 [Pan troglodytes]
Length = 168
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/99 (61%), Positives = 76/99 (76%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKR 99
QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKR
Sbjct: 61 QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKR 99
>gi|385301682|gb|EIF45855.1| proteasome component pup3 [Dekkera bruxellensis AWRI1499]
Length = 206
Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 92/125 (73%), Gaps = 2/125 (1%)
Query: 4 TEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTL 63
+ YNG + VAMVGK+C AIASD RLG Q ++ DF++I + +F+GL+GLATD ++
Sbjct: 6 STYNGGSAVAMVGKDCVAIASDLRLGQQSLGLSNDFEKIFH-YGHVFLGLTGLATDVMSV 64
Query: 64 YQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICT 122
++ L + LY+++E+R+++P +FA+L+S+ LY++RFGP+F P++AGL S KPFIC
Sbjct: 65 HEDLRKKTNLYKMKEQREIEPXSFANLISSSLYKRRFGPWFVGPIVAGLNSHSGKPFICG 124
Query: 123 MDSIG 127
D IG
Sbjct: 125 FDYIG 129
>gi|343471879|emb|CCD15804.1| unnamed protein product [Trypanosoma congolense IL3000]
gi|343474036|emb|CCD14226.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 205
Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI Y+G + +AM GK CF I SD RLG L+TI+ D ++ I+D + +GL+GL TD
Sbjct: 1 MSILTYSGGSCLAMAGKECFVIISDNRLGEGLKTISMDVPKLHVINDGIVMGLTGLRTDQ 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPF 119
QT Q++ FR ++Y+LREER++ + FA+LV+++LYE RFGP+F +PVI + + + +
Sbjct: 61 QTFAQKVRFRTEMYKLREEREINGKAFAALVASMLYEARFGPWFVEPVIGTIDRKTGEVY 120
Query: 120 ICTMDSIGA 128
+C D IGA
Sbjct: 121 LCATDLIGA 129
>gi|367018856|ref|XP_003658713.1| hypothetical protein MYCTH_2055659 [Myceliophthora thermophila ATCC
42464]
gi|347005980|gb|AEO53468.1| hypothetical protein MYCTH_2055659 [Myceliophthora thermophila ATCC
42464]
Length = 192
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 81/115 (70%), Gaps = 1/115 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I + D +F+GL+GLATD T+ ++ +
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGDHVFLGLTGLATDVSTVADLFRYKVNM 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPFICTMDSIG 127
Y+LREER + P TFA+LVS LYE+RFGPYF PV+AGL + PFIC DSIG
Sbjct: 61 YRLREERHIAPRTFANLVSTTLYERRFGPYFVNPVVAGLEPKTGAPFICGFDSIG 115
>gi|403223804|dbj|BAM41934.1| proteasome subunit beta type [Theileria orientalis strain Shintoku]
Length = 206
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 85/128 (66%), Gaps = 1/128 (0%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQ-TIATDFQRISKIHDRLFIGLSGLATDS 60
IT YNG A+VAM+G+ C AIA D+RLG Q T+ ++F + K+ D F SGLATD
Sbjct: 3 DITYYNGGAVVAMMGEGCVAIACDKRLGFNQQITVGSNFPKAFKVTDNCFFAASGLATDI 62
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
QTL ++F+ +YQ+R E+ M +T +++V +LY KRFGP+F VIAGL +++P+I
Sbjct: 63 QTLKDEIMFKVNMYQMRGEKQMNVKTLSNMVGTMLYSKRFGPWFVDSVIAGLDSKNEPYI 122
Query: 121 CTMDSIGA 128
D +GA
Sbjct: 123 TCFDLVGA 130
>gi|154340181|ref|XP_001566047.1| putative proteasome beta 3 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063366|emb|CAM39542.1| putative proteasome beta 3 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 205
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 88/129 (68%), Gaps = 1/129 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI Y+G +++AM GK CF I SD+RLG QL+TI+ + ++ ++D + GL+GL TD
Sbjct: 1 MSIMSYSGGSVMAMAGKECFVIISDKRLGEQLKTISMEVPKLHIVNDSVVYGLTGLRTDQ 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPF 119
QT ++ FR +Y+LREERD+ + FA+++ ++LYE RFGP+F +PVI + + +
Sbjct: 61 QTFANKVEFRINMYKLREERDITGKAFAAMIESMLYEARFGPWFVEPVIGSIDKTTGEVY 120
Query: 120 ICTMDSIGA 128
+C D IGA
Sbjct: 121 LCATDLIGA 129
>gi|346320946|gb|EGX90546.1| proteasome component PUP3 [Cordyceps militaris CM01]
gi|400595217|gb|EJP63024.1| proteasome component PUP3 [Beauveria bassiana ARSEF 2860]
Length = 191
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/115 (54%), Positives = 84/115 (73%), Gaps = 2/115 (1%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I + D +F+GL+GLATD T+ ++ +
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD-VFLGLTGLATDVSTVSDLFRYKVNM 59
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPFICTMDSIG 127
Y+LREERD+ P TFA+LVS+ LYE+RFGPYF PV+AGL + KPFIC DSIG
Sbjct: 60 YRLREERDIAPRTFANLVSSSLYERRFGPYFISPVVAGLDPKTGKPFICGFDSIG 114
>gi|340058923|emb|CCC53294.1| putative proteasome beta 3 subunit [Trypanosoma vivax Y486]
Length = 205
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI Y+G + +AM GK CF + SD RLG QL+TI+T+ ++ I+D + +GL+GL TD
Sbjct: 1 MSIMAYSGGSCLAMAGKECFVVISDNRLGEQLKTISTEVPKLHVINDSIVLGLTGLRTDQ 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPF 119
QT Q++ FR ++Y+L EER++ + FA+LV ++LYE RFGP+F +PVI + + + +
Sbjct: 61 QTFAQKVHFRTEMYKLCEEREINGKAFAALVMSMLYEARFGPWFVEPVIGSIDRKTGEVY 120
Query: 120 ICTMDSIGA 128
+C D IGA
Sbjct: 121 LCATDLIGA 129
>gi|367011527|ref|XP_003680264.1| hypothetical protein TDEL_0C01640 [Torulaspora delbrueckii]
gi|359747923|emb|CCE91053.1| hypothetical protein TDEL_0C01640 [Torulaspora delbrueckii]
Length = 205
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 85/122 (69%), Gaps = 2/122 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VAM GK+C AIASD RLG Q ++ F++I + +F+G++GLATD TL +
Sbjct: 8 NGGIVVAMAGKDCVAIASDLRLGSQSLGVSNKFEKIFH-YGHVFLGITGLATDVTTLSET 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
++ LY+LRE+R ++PETF LVS+ LYE+RFGPYF PV+AG+ S +KPFI D
Sbjct: 67 FRYKTNLYKLREDRPIEPETFTQLVSSTLYERRFGPYFVGPVVAGINSKTEKPFIAGFDL 126
Query: 126 IG 127
IG
Sbjct: 127 IG 128
>gi|71029220|ref|XP_764253.1| proteasome subunit beta type 3 [Theileria parva strain Muguga]
gi|68351207|gb|EAN31970.1| proteasome subunit beta type 3, putative [Theileria parva]
Length = 206
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 89/127 (70%), Gaps = 1/127 (0%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQ-TIATDFQRISKIHDRLFIGLSGLATDSQ 61
IT YNG A+VAM+G+ C AIA D+RLG+ Q T++++F + K+ + F SGLATD Q
Sbjct: 4 ITSYNGGAVVAMMGEGCVAIACDKRLGLNQQVTVSSNFPKAFKVTESCFFAASGLATDVQ 63
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
TL + ++F+ +Y+LR +++M +T +++V A+LY +RFGP+F VIAGL ++ P+I
Sbjct: 64 TLKEEIMFKVNMYKLRGDKEMSVKTLSNMVGAMLYSRRFGPWFVDSVIAGLDNDSSPYIT 123
Query: 122 TMDSIGA 128
D +GA
Sbjct: 124 CFDLVGA 130
>gi|452980318|gb|EME80079.1| hypothetical protein MYCFIDRAFT_189753 [Pseudocercospora fijiensis
CIRAD86]
Length = 192
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 83/115 (72%), Gaps = 1/115 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I F+GL+GLATD T+ + ++ +
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFNYSQSTFLGLTGLATDVSTVSELFRYKVNM 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTMDSIG 127
Y+LREER++ P+TFA+LVS+ LYE+RFGP+F PV+AG++ KPFIC DSIG
Sbjct: 61 YRLREEREISPQTFANLVSSSLYERRFGPWFVSPVVAGINQTTGKPFICGFDSIG 115
>gi|302411392|ref|XP_003003529.1| proteasome component PUP3 [Verticillium albo-atrum VaMs.102]
gi|261357434|gb|EEY19862.1| proteasome component PUP3 [Verticillium albo-atrum VaMs.102]
Length = 191
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 97/150 (64%), Gaps = 9/150 (6%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I + D +F+GL+GLATD T+ ++ +
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD-VFLGLTGLATDVTTVGDLFRYKSNM 59
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPFICTMDSIGAKYVG 132
Y+LREER++ P TFA+LVS+ LYE+RFGPYF PV+AGL + KPFIC DSIG +
Sbjct: 60 YRLREERNIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDSIGC--ID 117
Query: 133 SLQKILLLLELLESLFMVPVRQCSSLIWNP 162
+ ++ E LF + C SL W P
Sbjct: 118 FAKDFIVSGTASEQLFGM----CESL-WEP 142
>gi|336261120|ref|XP_003345351.1| hypothetical protein SMAC_04582 [Sordaria macrospora k-hell]
gi|380090602|emb|CCC11597.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 191
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/150 (46%), Positives = 98/150 (65%), Gaps = 9/150 (6%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I + D +F+GL+GLATD T+ ++ +
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD-VFLGLTGLATDVSTVSDLFRYKVNM 59
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPFICTMDSIGAKYVG 132
Y+LREER++ P+TFA+LVS+ LYE+RFGPYF PV+AGL + +PFIC DSIG +
Sbjct: 60 YRLREERNIAPKTFANLVSSSLYERRFGPYFVSPVVAGLDPKTSEPFICGFDSIGC--ID 117
Query: 133 SLQKILLLLELLESLFMVPVRQCSSLIWNP 162
+ ++ E LF + C SL W P
Sbjct: 118 FAKDFIVSGTATEQLFGM----CESL-WEP 142
>gi|169602118|ref|XP_001794481.1| hypothetical protein SNOG_03937 [Phaeosphaeria nodorum SN15]
gi|160706087|gb|EAT89142.2| hypothetical protein SNOG_03937 [Phaeosphaeria nodorum SN15]
Length = 195
Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/115 (54%), Positives = 84/115 (73%), Gaps = 2/115 (1%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q TI+ +F +I + D +F+GL+GLATD T+ ++ +
Sbjct: 1 MVGKDCVAIACDLRLGMQALTISNNFPKIFQYGD-VFLGLTGLATDVATVSDLFRYKVNM 59
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTMDSIG 127
Y+LREER++ P+T A+LVS+ LYEKRFGPYF PVIAG++ KPFIC DSIG
Sbjct: 60 YRLREERNISPQTMANLVSSSLYEKRFGPYFVSPVIAGINQTTGKPFICGFDSIG 114
>gi|440463429|gb|ELQ33009.1| proteasome component PUP3 [Magnaporthe oryzae Y34]
gi|440481325|gb|ELQ61924.1| proteasome component PUP3 [Magnaporthe oryzae P131]
Length = 192
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 81/115 (70%), Gaps = 1/115 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I +F+GL+GLATD T+ ++ +
Sbjct: 1 MVGKDCVAIACDLRLGMQALTVSNNFPKIFSYSSSVFLGLTGLATDVATVSDLFRYKVNM 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPFICTMDSIG 127
Y+LREER++ P TFA+LVS+ LYE+RFGPYF PV+AGL + PFIC DSIG
Sbjct: 61 YRLREERNIAPRTFANLVSSSLYERRFGPYFVSPVVAGLEPKTGAPFICGFDSIG 115
>gi|342890397|gb|EGU89215.1| hypothetical protein FOXB_00168 [Fusarium oxysporum Fo5176]
Length = 191
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 62/115 (53%), Positives = 83/115 (72%), Gaps = 2/115 (1%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I + D +F+GL+GLATD T+ ++ +
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD-VFLGLTGLATDVNTVSDLFRYKVNM 59
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPFICTMDSIG 127
Y+LREER + P TFA+LVS+ LYE+RFGPYF PV+AGL + KPFIC DSIG
Sbjct: 60 YRLREERSIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDSIG 114
>gi|297791977|ref|XP_002863873.1| hypothetical protein ARALYDRAFT_917696 [Arabidopsis lyrata subsp.
lyrata]
gi|297309708|gb|EFH40132.1| hypothetical protein ARALYDRAFT_917696 [Arabidopsis lyrata subsp.
lyrata]
Length = 94
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/129 (53%), Positives = 77/129 (59%), Gaps = 40/129 (31%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
+ I EYN SA+ AM GKNCFAIASD+R GVQLQTI
Sbjct: 6 IQIFEYNESAVDAMEGKNCFAIASDQRHGVQLQTI------------------------- 40
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
LREERD+KPETFASLVSA+LYEKRFGPY CQ VIA L +++KPF
Sbjct: 41 ---------------LREERDIKPETFASLVSAILYEKRFGPYLCQLVIAELGEDNKPFT 85
Query: 121 CTMDSIGAK 129
CTMDSI AK
Sbjct: 86 CTMDSIAAK 94
>gi|149235806|ref|XP_001523781.1| proteasome component PUP3 [Lodderomyces elongisporus NRRL YB-4239]
gi|146452760|gb|EDK47016.1| proteasome component PUP3 [Lodderomyces elongisporus NRRL YB-4239]
Length = 212
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 84/128 (65%), Gaps = 7/128 (5%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG A VAM+GK+C AIASD RLG Q + F++ + F+ L+GLATD T+ +
Sbjct: 8 NGGAAVAMIGKDCIAIASDLRLGSQSLGVLNHFEKTFQFLPHTFMALTGLATDVTTVLEL 67
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-------SDEDKPF 119
F+ LY+LREE ++P T A+LVS+LLYE+RFGP+F P++AGL + E KPF
Sbjct: 68 FKFKTNLYKLREEHYIEPLTLANLVSSLLYERRFGPWFVSPIVAGLEKVKGSKNGEVKPF 127
Query: 120 ICTMDSIG 127
IC DSIG
Sbjct: 128 ICGFDSIG 135
>gi|429858056|gb|ELA32890.1| proteasome component pup3 [Colletotrichum gloeosporioides Nara gc5]
Length = 191
Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 97/150 (64%), Gaps = 9/150 (6%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I + D +F+GL+GLATD T+ ++ +
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD-VFLGLTGLATDVTTVGDLFRYKVNM 59
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPFICTMDSIGAKYVG 132
Y+LREER++ P TFA+LVS+ LYE+RFGPYF PV+AGL + KPFIC DSIG +
Sbjct: 60 YRLREERNIAPTTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDSIGC--ID 117
Query: 133 SLQKILLLLELLESLFMVPVRQCSSLIWNP 162
+ ++ E LF + C SL W P
Sbjct: 118 FAKDFIVSGTASEQLFGM----CESL-WEP 142
>gi|330925823|ref|XP_003301210.1| hypothetical protein PTT_12656 [Pyrenophora teres f. teres 0-1]
gi|311324271|gb|EFQ90697.1| hypothetical protein PTT_12656 [Pyrenophora teres f. teres 0-1]
Length = 191
Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/115 (53%), Positives = 84/115 (73%), Gaps = 2/115 (1%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I + D +F+GL+GLATD T+ ++ +
Sbjct: 1 MVGKDCVAIACDLRLGMQALTVSNNFPKIFQYGD-VFLGLTGLATDVSTVSDLFRYKVNM 59
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTMDSIG 127
Y+LREER++ P+T A+LVS+ LYEKRFGPYF PVIAG++ KPFIC DSIG
Sbjct: 60 YRLREERNISPQTMANLVSSSLYEKRFGPYFISPVIAGINQTSGKPFICGFDSIG 114
>gi|116181896|ref|XP_001220797.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88185873|gb|EAQ93341.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 192
Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 94/150 (62%), Gaps = 8/150 (5%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F ++ + + +F+GL+GLATD T+ ++ +
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKVFQYGENVFLGLTGLATDVSTVSDLFRYKVNM 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-DEDKPFICTMDSIGAKYVG 132
Y+LREER + P TFA+LVS+ LYE+RFGPYF PV+AGL PFIC DSIG +
Sbjct: 61 YRLREERHIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPTTGAPFICGFDSIGC--ID 118
Query: 133 SLQKILLLLELLESLFMVPVRQCSSLIWNP 162
+ ++ E LF + C SL W P
Sbjct: 119 FAKDFIVSGTATEQLFGM----CESL-WEP 143
>gi|367052597|ref|XP_003656677.1| hypothetical protein THITE_2147182 [Thielavia terrestris NRRL 8126]
gi|347003942|gb|AEO70341.1| hypothetical protein THITE_2147182 [Thielavia terrestris NRRL 8126]
Length = 192
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%), Gaps = 1/115 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
M GK+C AIA D RLG+Q T++ +F +I + D +F+GL+GLATD T+ ++ L
Sbjct: 1 MAGKDCVAIACDLRLGLQALTVSNNFPKIFQYGDHVFLGLTGLATDVATVADLFRYKVNL 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPFICTMDSIG 127
Y+LREER + P TFA+LVS+ LYE+RFGP+F PV+AGL + +PFIC DSIG
Sbjct: 61 YRLREERHIAPRTFANLVSSSLYERRFGPFFVSPVVAGLDPKTGQPFICGFDSIG 115
>gi|365981473|ref|XP_003667570.1| hypothetical protein NDAI_0A01690 [Naumovozyma dairenensis CBS 421]
gi|343766336|emb|CCD22327.1| hypothetical protein NDAI_0A01690 [Naumovozyma dairenensis CBS 421]
Length = 205
Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 84/122 (68%), Gaps = 2/122 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VAM GK+C AIA D RLG Q ++ +F++I + +F+G++GLATD TL +
Sbjct: 8 NGGIVVAMAGKDCVAIACDLRLGSQSLGVSNNFEKIFH-YGHVFLGITGLATDVTTLSET 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
++ LY+L+E+R ++PETF LVS+ LYEKRFGPYF PV+AG+ S KPFI D
Sbjct: 67 FRYKSNLYELKEDRAIEPETFTQLVSSTLYEKRFGPYFVGPVVAGINSKSGKPFIAGFDL 126
Query: 126 IG 127
IG
Sbjct: 127 IG 128
>gi|410084182|ref|XP_003959668.1| hypothetical protein KAFR_0K01790 [Kazachstania africana CBS 2517]
gi|372466260|emb|CCF60533.1| hypothetical protein KAFR_0K01790 [Kazachstania africana CBS 2517]
Length = 205
Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 85/122 (69%), Gaps = 2/122 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VAM GK+C AIA D RLG Q ++ +F++I ++ +F G++GLATD TL +
Sbjct: 8 NGGIVVAMAGKDCVAIACDLRLGSQSLGVSNNFEKIFN-YEHVFFGITGLATDVTTLNEV 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
++ LY+L+E+R ++PETFA LVS+ LYE+RFGPYF PV+AG+ S KPFI D
Sbjct: 67 FRYKTNLYKLKEDRAIEPETFAQLVSSTLYERRFGPYFVGPVVAGINSKSGKPFIAGFDL 126
Query: 126 IG 127
IG
Sbjct: 127 IG 128
>gi|367001775|ref|XP_003685622.1| hypothetical protein TPHA_0E00940 [Tetrapisispora phaffii CBS 4417]
gi|357523921|emb|CCE63188.1| hypothetical protein TPHA_0E00940 [Tetrapisispora phaffii CBS 4417]
Length = 205
Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 83/122 (68%), Gaps = 2/122 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VAM GK+C AIA D RLG Q ++ +F++I + +F G++GLATD TL +
Sbjct: 8 NGGIVVAMAGKDCVAIACDLRLGSQSLGVSNNFEKIFN-YGHVFFGITGLATDVTTLNEV 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
++ LY+L+EER ++PETF LVS+ LYEKRFGPYF PV+AG+ S KPFI D
Sbjct: 67 FRYKTNLYKLKEERPIEPETFTQLVSSTLYEKRFGPYFVGPVVAGINSKSGKPFIAGFDL 126
Query: 126 IG 127
IG
Sbjct: 127 IG 128
>gi|322701542|gb|EFY93291.1| proteasome component PUP3 [Metarhizium acridum CQMa 102]
Length = 191
Score = 125 bits (314), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 62/115 (53%), Positives = 83/115 (72%), Gaps = 2/115 (1%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I + D +F+GL+GLATD T+ ++ +
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD-VFLGLTGLATDVSTVADLFRYKVNM 59
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPFICTMDSIG 127
Y+LREER + P TFA+LVS+ LYE+RFGPYF PV+AGL + KPFIC DSIG
Sbjct: 60 YRLREERAIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDSIG 114
>gi|225680862|gb|EEH19146.1| proteasome subunit beta type-3 [Paracoccidioides brasiliensis Pb03]
gi|226292563|gb|EEH47983.1| proteasome component PUP3 [Paracoccidioides brasiliensis Pb18]
Length = 192
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%), Gaps = 1/115 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I ++GL+GLATD T+ L F+ +
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFNYAPSTYLGLTGLATDVSTVSDVLRFKVNM 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTMDSIG 127
Y+LREER + P+T A+LVS+ LYEKRFGPYF PV+AG+++ +PFIC DSIG
Sbjct: 61 YRLREERQISPQTLANLVSSSLYEKRFGPYFVSPVLAGINNTTGEPFICGFDSIG 115
>gi|164427141|ref|XP_964481.2| proteasome component PUP3 [Neurospora crassa OR74A]
gi|157071624|gb|EAA35245.2| proteasome component PUP3 [Neurospora crassa OR74A]
Length = 191
Score = 125 bits (313), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 84/115 (73%), Gaps = 2/115 (1%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I + D +F+GL+GLATD T+ ++ +
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD-VFLGLTGLATDVSTVSDLFRYKVNM 59
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPFICTMDSIG 127
Y+LREER++ P TFA+LVS+ LYE+RFGPYF PV+AGL + +PFIC DSIG
Sbjct: 60 YRLREERNIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGEPFICGFDSIG 114
>gi|84997075|ref|XP_953259.1| proteasome beta 3 subunit [Theileria annulata strain Ankara]
gi|65304255|emb|CAI76634.1| proteasome beta 3 subunit, putative [Theileria annulata]
Length = 220
Score = 125 bits (313), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 87/127 (68%), Gaps = 1/127 (0%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQ-TIATDFQRISKIHDRLFIGLSGLATDSQ 61
IT YNG ALVAM+G+ C AIA D+RLG+ Q T++++F + K+ + F SGLATD Q
Sbjct: 18 ITSYNGGALVAMMGEGCVAIACDKRLGLNQQVTVSSNFPKAFKVTESCFFAASGLATDVQ 77
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
TL ++F+ +Y+LR +++M +T +++V ++LY +RFGP+F VIAGL + P+I
Sbjct: 78 TLKDEIMFKVNMYKLRGDKEMSVKTLSNMVGSMLYSRRFGPWFVDSVIAGLDTDSSPYIT 137
Query: 122 TMDSIGA 128
D +GA
Sbjct: 138 CFDLVGA 144
>gi|146323725|ref|XP_752084.2| proteasome component Pup3 [Aspergillus fumigatus Af293]
gi|129557567|gb|EAL90046.2| proteasome component Pup3, putative [Aspergillus fumigatus Af293]
gi|159125002|gb|EDP50119.1| proteasome component Pup3, putative [Aspergillus fumigatus A1163]
Length = 192
Score = 125 bits (313), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 82/115 (71%), Gaps = 1/115 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I ++GL+GLATD T+ L ++ +
Sbjct: 1 MVGKDCVAIACDLRLGMQALTVSNNFPKIFNYGPSTYLGLTGLATDVNTVSDLLRYKVNM 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDSIG 127
Y+LREER++ P+T A+LVS+ LYE+RFGP+F PVIAG+ S KPFIC DSIG
Sbjct: 61 YRLREERNIAPQTLANLVSSSLYERRFGPFFVSPVIAGVNSTTGKPFICGFDSIG 115
>gi|50309707|ref|XP_454865.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644000|emb|CAG99952.1| KLLA0E20197p [Kluyveromyces lactis]
Length = 205
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 82/122 (67%), Gaps = 2/122 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VAM GK+C AI D RLG Q +A +F++I + +F+GL+GLATD TL +
Sbjct: 8 NGGIVVAMTGKDCVAIGCDLRLGSQSLGVANNFEKIFH-YGHVFLGLTGLATDVLTLSES 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
++ LY+LRE+R ++PETF LVS LYEKRFGPYF PV+AG+ S KPFI D
Sbjct: 67 FRYKTNLYKLREDRPIEPETFTQLVSTSLYEKRFGPYFVGPVVAGINSKSGKPFIAGFDL 126
Query: 126 IG 127
IG
Sbjct: 127 IG 128
>gi|320580955|gb|EFW95177.1| Beta 3 subunit of the 20S proteasome [Ogataea parapolymorpha DL-1]
Length = 191
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 85/115 (73%), Gaps = 2/115 (1%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG Q +A +F++I ++ +F+GL+GLATD T+Y+ + L
Sbjct: 1 MVGKDCVAIACDLRLGNQSLGVANNFEKIFQLG-HVFLGLTGLATDVTTVYENFRMKTNL 59
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDSIG 127
Y++REER+++PE+FA+LVS+ LYE+RFGP+F P++AG+ S KPFIC D IG
Sbjct: 60 YKMREEREIEPESFANLVSSSLYERRFGPWFVGPLVAGINSKTGKPFICGFDFIG 114
>gi|322705678|gb|EFY97262.1| proteasome component PUP3 [Metarhizium anisopliae ARSEF 23]
Length = 191
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/115 (53%), Positives = 83/115 (72%), Gaps = 2/115 (1%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I + D +F+GL+GLATD T+ ++ +
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD-VFLGLTGLATDVGTVADLFRYKVNM 59
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPFICTMDSIG 127
Y+LREER + P TFA+LVS+ LYE+RFGPYF PV+AGL + KPFIC DSIG
Sbjct: 60 YRLREERAIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDSIG 114
>gi|365761090|gb|EHN02766.1| Pup3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401841875|gb|EJT44194.1| PUP3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 205
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 83/122 (68%), Gaps = 2/122 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VAM GK+C AIA D RLG Q ++ F++I + +F+G++GLATD TL +
Sbjct: 8 NGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFH-YGHVFLGITGLATDVTTLNEM 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
++ LY+LREER ++PETF LVS+ LYE+RFGPYF PV+AG+ S KPFI D
Sbjct: 67 FRYKTNLYKLREERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGFDL 126
Query: 126 IG 127
IG
Sbjct: 127 IG 128
>gi|378725424|gb|EHY51883.1| proteasome component PUP3 [Exophiala dermatitidis NIH/UT8656]
Length = 192
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 83/115 (72%), Gaps = 1/115 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I +++GL+GLATD QT+ ++ +
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFTYGPSVYLGLTGLATDVQTVSDTFRYKVNM 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTMDSIG 127
Y+LREER++ P+T A+LVS+ LYE+RFGP+F PV+AG++ KPFIC DSIG
Sbjct: 61 YRLREERNISPQTLANLVSSSLYERRFGPWFVSPVLAGINHTTGKPFICGFDSIG 115
>gi|115398103|ref|XP_001214643.1| proteasome component PUP3 [Aspergillus terreus NIH2624]
gi|114192834|gb|EAU34534.1| proteasome component PUP3 [Aspergillus terreus NIH2624]
Length = 192
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 82/115 (71%), Gaps = 1/115 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I F+GL+GLATD T+ L ++ +
Sbjct: 1 MVGKDCVAIACDLRLGMQALTVSNNFPKIFNYGPSTFLGLTGLATDVSTVSDLLRYKVNM 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-DEDKPFICTMDSIG 127
Y+LREER++ P+T A+LVS+ LYE+RFGP+F PV+AG++ KPFIC DSIG
Sbjct: 61 YRLREERNIAPQTLANLVSSSLYERRFGPFFVSPVVAGINYTTGKPFICGFDSIG 115
>gi|261201474|ref|XP_002627137.1| 20S proteasome peptidase [Ajellomyces dermatitidis SLH14081]
gi|239592196|gb|EEQ74777.1| 20S proteasome peptidase [Ajellomyces dermatitidis SLH14081]
gi|239611645|gb|EEQ88632.1| proteasome component Pup3 [Ajellomyces dermatitidis ER-3]
gi|327348342|gb|EGE77199.1| proteasome subunit beta type [Ajellomyces dermatitidis ATCC 18188]
Length = 192
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 80/115 (69%), Gaps = 1/115 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I ++GL+GLATD T+ L F+ +
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFNYAPSTYLGLTGLATDVSTVSDVLRFKVNM 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTMDSIG 127
Y+LREER + P+T A+L S+ LYEKRFGPYF PV+AG+ + KPFIC DSIG
Sbjct: 61 YRLREERHISPKTLANLTSSTLYEKRFGPYFVSPVLAGIDNTTGKPFICGFDSIG 115
>gi|254578212|ref|XP_002495092.1| ZYRO0B03146p [Zygosaccharomyces rouxii]
gi|238937982|emb|CAR26159.1| ZYRO0B03146p [Zygosaccharomyces rouxii]
Length = 205
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 84/122 (68%), Gaps = 2/122 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG VAM GK+C AIA D RLG+Q ++ +F++I K + +F+GL+GLATD TL +
Sbjct: 8 NGGVCVAMTGKDCVAIACDLRLGMQSLGVSNNFEKIFK-YGHVFLGLTGLATDVTTLSET 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
++ LY L+E+R ++PETF LVS+ LYE+RFGP+F P++AG+ S KPFI D
Sbjct: 67 FRYKTNLYNLKEDRPIEPETFTQLVSSSLYERRFGPFFVGPIVAGINSKTGKPFIAGFDM 126
Query: 126 IG 127
IG
Sbjct: 127 IG 128
>gi|366989209|ref|XP_003674372.1| hypothetical protein NCAS_0A14350 [Naumovozyma castellii CBS 4309]
gi|342300235|emb|CCC67993.1| hypothetical protein NCAS_0A14350 [Naumovozyma castellii CBS 4309]
Length = 205
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 85/122 (69%), Gaps = 2/122 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VAM GK+C AIA D RLG Q ++ +F++I + +F+GL+GLATD TL +
Sbjct: 8 NGGIVVAMTGKDCVAIACDLRLGSQSLGVSNNFEKIFH-YGHVFLGLTGLATDVTTLSET 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPFICTMDS 125
++ LY+L+E+R ++P+TF LVS LYEKRFGPYF PV+AG++ + +KPFI D
Sbjct: 67 FRYKTNLYKLKEDRPIEPDTFIQLVSTTLYEKRFGPYFVGPVVAGINSQTEKPFIAGFDL 126
Query: 126 IG 127
IG
Sbjct: 127 IG 128
>gi|159110825|ref|XP_001705654.1| Proteasome subunit beta type 3 [Giardia lamblia ATCC 50803]
gi|157433742|gb|EDO77980.1| Proteasome subunit beta type 3 [Giardia lamblia ATCC 50803]
Length = 207
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 87/127 (68%), Gaps = 1/127 (0%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIA-TDFQRISKIHDRLFIGLSGLATDS 60
+I EYNGSAL+ + GK+C A+A+D+RLG QT+ + +RI ++ +GL+GL TD
Sbjct: 3 NIWEYNGSALIGIKGKDCVALAADKRLGCSYQTLTIGNEERIFRLSQSCLLGLAGLQTDV 62
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
T Y+++ + LY L+E+R+++P A ++S+ LY+ RFGPYF P+IAG + KP++
Sbjct: 63 LTTYRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEADGKPYL 122
Query: 121 CTMDSIG 127
MD+IG
Sbjct: 123 GAMDTIG 129
>gi|240281173|gb|EER44676.1| proteasome component PUP3 [Ajellomyces capsulatus H143]
Length = 140
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 80/115 (69%), Gaps = 1/115 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ F +I ++GL+GLATD ++ L ++ +
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNSFPKIFNYAPSTYLGLTGLATDVSSVSDLLRYKVNM 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDSIG 127
Y+LREER + P+T A+L+S+ LYEKRFGPYF PV+AG+ S KPFIC DSIG
Sbjct: 61 YRLREERQISPQTLANLISSSLYEKRFGPYFVSPVLAGINSTTGKPFICGFDSIG 115
>gi|340520586|gb|EGR50822.1| 20S proteasome, beta subunit [Trichoderma reesei QM6a]
Length = 191
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/115 (53%), Positives = 82/115 (71%), Gaps = 2/115 (1%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q TI+ +F +I + D +F+GL+GLATD T+ ++ +
Sbjct: 1 MVGKDCVAIACDLRLGLQALTISNNFPKIFQYGD-VFLGLTGLATDVSTVSDLFRYKVNM 59
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPFICTMDSIG 127
Y+LREER + P TFA+LVS+ LYE+RFGPYF PV+AGL + PFIC DSIG
Sbjct: 60 YRLREERAIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGAPFICGFDSIG 114
>gi|119501054|ref|XP_001267284.1| proteasome component Pup3, putative [Neosartorya fischeri NRRL 181]
gi|119415449|gb|EAW25387.1| proteasome component Pup3, putative [Neosartorya fischeri NRRL 181]
Length = 192
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 81/115 (70%), Gaps = 1/115 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I ++GL+GLATD T+ ++ +
Sbjct: 1 MVGKDCVAIACDLRLGMQALTVSNNFPKIFNYGPSTYLGLTGLATDVNTVSDLFRYKVNM 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDSIG 127
Y+LREER++ P+T A+LVS+ LYE+RFGP+F PVIAG+ S KPFIC DSIG
Sbjct: 61 YRLREERNIAPQTLANLVSSSLYERRFGPFFVSPVIAGVNSTTGKPFICGFDSIG 115
>gi|392299798|gb|EIW10890.1| Pup3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 205
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 83/122 (68%), Gaps = 2/122 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VAM GK+C AIA D RLG Q ++ F++I + +F+G++GLATD TL +
Sbjct: 8 NGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFH-YGHVFLGITGLATDVTTLNEM 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
++ LY+L+EER ++PETF LVS+ LYE+RFGPYF PV+AG+ S KPFI D
Sbjct: 67 FRYKTNLYKLKEERTIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGFDL 126
Query: 126 IG 127
IG
Sbjct: 127 IG 128
>gi|207345904|gb|EDZ72572.1| YER094Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 187
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 83/122 (68%), Gaps = 2/122 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VAM GK+C AIA D RLG Q ++ F++I + +F+G++GLATD TL +
Sbjct: 8 NGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFH-YGHVFLGITGLATDVTTLNEM 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
++ LY+L+EER ++PETF LVS+ LYE+RFGPYF PV+AG+ S KPFI D
Sbjct: 67 FRYKTNLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGFDL 126
Query: 126 IG 127
IG
Sbjct: 127 IG 128
>gi|50290063|ref|XP_447463.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526773|emb|CAG60400.1| unnamed protein product [Candida glabrata]
Length = 205
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 83/122 (68%), Gaps = 2/122 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VAM GK+C AIA D RLG Q ++ +F+++ + +F G++GLATD TL +
Sbjct: 8 NGGIVVAMAGKDCVAIACDLRLGNQSLGVSNNFEKVFN-YGHVFFGITGLATDVTTLNEL 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
++ LY+LRE+R ++PETF LVS+ LYE+RFGPYF PV+AG+ S KPFI D
Sbjct: 67 FRYKTNLYKLREDRPIEPETFTQLVSSTLYERRFGPYFVGPVVAGINSKSGKPFIAGFDL 126
Query: 126 IG 127
IG
Sbjct: 127 IG 128
>gi|398364611|ref|NP_011020.3| proteasome core particle subunit beta 3 [Saccharomyces cerevisiae
S288c]
gi|141337|sp|P25451.1|PSB3_YEAST RecName: Full=Proteasome subunit beta type-3; AltName:
Full=Macropain subunit PUP3; AltName:
Full=Multicatalytic endopeptidase complex subunit PUP3;
AltName: Full=Proteasome component PUP3
gi|11514000|pdb|1G0U|I Chain I, A Gated Channel Into The Proteasome Core Particle
gi|11514014|pdb|1G0U|W Chain W, A Gated Channel Into The Proteasome Core Particle
gi|14488814|pdb|1FNT|J Chain J, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|14488828|pdb|1FNT|X Chain X, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|75765708|pdb|1Z7Q|J Chain J, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|75765722|pdb|1Z7Q|X Chain X, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|178847468|pdb|2ZCY|I Chain I, Yeast 20s Proteasome:syringolin A-Complex
gi|178847482|pdb|2ZCY|W Chain W, Yeast 20s Proteasome:syringolin A-Complex
gi|178847510|pdb|3BDM|I Chain I, Yeast 20s Proteasome:glidobactin A-Complex
gi|178847524|pdb|3BDM|W Chain W, Yeast 20s Proteasome:glidobactin A-Complex
gi|323462944|pdb|3NZJ|I Chain I, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462958|pdb|3NZJ|W Chain W, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462972|pdb|3NZW|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323462986|pdb|3NZW|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323463000|pdb|3NZX|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|323463014|pdb|3NZX|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|333361180|pdb|3MG6|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361194|pdb|3MG6|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361208|pdb|3MG7|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361222|pdb|3MG7|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361236|pdb|3MG8|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|333361250|pdb|3MG8|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|378792249|pdb|3UN4|I Chain I, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792263|pdb|3UN4|W Chain W, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792283|pdb|3UN8|I Chain I, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|378792297|pdb|3UN8|W Chain W, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|403071956|pdb|4B4T|3 Chain 3, Near-Atomic Resolution Structural Model Of The Yeast 26s
Proteasome
gi|403072200|pdb|4G4S|J Chain J, Structure Of Proteasome-Pba1-Pba2 Complex
gi|444302347|pdb|4INR|I Chain I, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302361|pdb|4INR|W Chain W, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302375|pdb|4INT|I Chain I, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302389|pdb|4INT|W Chain W, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302403|pdb|4INU|I Chain I, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
gi|444302417|pdb|4INU|W Chain W, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
gi|172337|gb|AAA34946.1| ORF1 [Saccharomyces cerevisiae]
gi|603332|gb|AAB64649.1| Pup3p [Saccharomyces cerevisiae]
gi|151944812|gb|EDN63071.1| 20S proteasome subunit beta3_sc [Saccharomyces cerevisiae YJM789]
gi|190405659|gb|EDV08926.1| proteasome component PUP3 [Saccharomyces cerevisiae RM11-1a]
gi|256271461|gb|EEU06515.1| Pup3p [Saccharomyces cerevisiae JAY291]
gi|259146019|emb|CAY79279.1| Pup3p [Saccharomyces cerevisiae EC1118]
gi|285811728|tpg|DAA07756.1| TPA: proteasome core particle subunit beta 3 [Saccharomyces
cerevisiae S288c]
gi|323305263|gb|EGA59010.1| Pup3p [Saccharomyces cerevisiae FostersB]
gi|323333773|gb|EGA75164.1| Pup3p [Saccharomyces cerevisiae AWRI796]
gi|323337981|gb|EGA79220.1| Pup3p [Saccharomyces cerevisiae Vin13]
gi|323355291|gb|EGA87116.1| Pup3p [Saccharomyces cerevisiae VL3]
gi|349577761|dbj|GAA22929.1| K7_Pup3p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365766114|gb|EHN07615.1| Pup3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 205
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 83/122 (68%), Gaps = 2/122 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VAM GK+C AIA D RLG Q ++ F++I + +F+G++GLATD TL +
Sbjct: 8 NGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFH-YGHVFLGITGLATDVTTLNEM 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
++ LY+L+EER ++PETF LVS+ LYE+RFGPYF PV+AG+ S KPFI D
Sbjct: 67 FRYKTNLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGFDL 126
Query: 126 IG 127
IG
Sbjct: 127 IG 128
>gi|154279074|ref|XP_001540350.1| proteasome component PUP3 [Ajellomyces capsulatus NAm1]
gi|150412293|gb|EDN07680.1| proteasome component PUP3 [Ajellomyces capsulatus NAm1]
gi|225562334|gb|EEH10613.1| proteasome component PUP3 [Ajellomyces capsulatus G186AR]
Length = 192
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 81/115 (70%), Gaps = 1/115 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I ++GL+GLATD ++ L ++ +
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFNYAPSTYLGLTGLATDVSSVSDLLRYKVNM 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDSIG 127
Y+LREER + P+T A+L+S+ LYEKRFGPYF PV+AG+ S KPFIC DSIG
Sbjct: 61 YRLREERQISPQTLANLISSSLYEKRFGPYFVSPVLAGINSTTGKPFICGFDSIG 115
>gi|156849065|ref|XP_001647413.1| hypothetical protein Kpol_1018p88 [Vanderwaltozyma polyspora DSM
70294]
gi|156118099|gb|EDO19555.1| hypothetical protein Kpol_1018p88 [Vanderwaltozyma polyspora DSM
70294]
Length = 205
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 84/122 (68%), Gaps = 2/122 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VAM GK+C AIA D RLG Q ++ +F++I + +F+G++GLATD TL +
Sbjct: 8 NGGIVVAMTGKDCVAIACDLRLGNQSLGVSNNFEKIFH-YGHVFLGITGLATDVLTLSEE 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
++ LY+LRE+R ++PETF LVS+ LYE+RFGPYF PV+AG+ S KPFI D
Sbjct: 67 FRYKTNLYKLREDRLIEPETFTQLVSSTLYERRFGPYFVGPVVAGINSKSGKPFIAGFDL 126
Query: 126 IG 127
IG
Sbjct: 127 IG 128
>gi|3114278|pdb|1RYP|J Chain J, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|3114292|pdb|1RYP|X Chain X, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|11513421|pdb|1G65|I Chain I, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|11513435|pdb|1G65|W Chain W, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|20150385|pdb|1JD2|I Chain I, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|20150392|pdb|1JD2|P Chain P, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|93279376|pdb|2F16|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|93279390|pdb|2F16|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|99032210|pdb|2FAK|I Chain I, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|99032224|pdb|2FAK|W Chain W, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|112490851|pdb|2GPL|I Chain I, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|112490865|pdb|2GPL|W Chain W, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|190016375|pdb|3D29|I Chain I, Proteasome Inhibition By Fellutamide B
gi|190016389|pdb|3D29|W Chain W, Proteasome Inhibition By Fellutamide B
gi|197725329|pdb|3E47|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|197725343|pdb|3E47|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|211939220|pdb|3DY3|I Chain I, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939234|pdb|3DY3|W Chain W, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939248|pdb|3DY4|I Chain I, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|211939262|pdb|3DY4|W Chain W, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|238828245|pdb|3GPJ|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|238828259|pdb|3GPJ|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|258588329|pdb|3GPT|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588343|pdb|3GPT|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588357|pdb|3GPW|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588371|pdb|3GPW|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588551|pdb|3HYE|I Chain I, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|258588565|pdb|3HYE|W Chain W, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|298508231|pdb|1VSY|J Chain J, Proteasome Activator Complex
gi|298508245|pdb|1VSY|X Chain X, Proteasome Activator Complex
gi|298508447|pdb|3L5Q|N Chain N, Proteasome Activator Complex
gi|298508461|pdb|3L5Q|Z Chain Z, Proteasome Activator Complex
gi|330689389|pdb|3MG4|I Chain I, Structure Of Yeast 20s Proteasome With Compound 1
gi|330689403|pdb|3MG4|W Chain W, Structure Of Yeast 20s Proteasome With Compound 1
gi|333361152|pdb|3MG0|I Chain I, Structure Of Yeast 20s Proteasome With Bortezomib
gi|333361166|pdb|3MG0|W Chain W, Structure Of Yeast 20s Proteasome With Bortezomib
gi|335892349|pdb|3OKJ|I Chain I, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|335892363|pdb|3OKJ|W Chain W, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|340780427|pdb|3OEU|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780441|pdb|3OEU|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780455|pdb|3OEV|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|340780469|pdb|3OEV|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|350610680|pdb|3TDD|I Chain I, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|350610694|pdb|3TDD|W Chain W, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|359545854|pdb|3SHJ|I Chain I, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|359545868|pdb|3SHJ|W Chain W, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|390980824|pdb|3SDI|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980838|pdb|3SDI|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980852|pdb|3SDK|I Chain I, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|390980866|pdb|3SDK|W Chain W, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|402550740|pdb|4GK7|I Chain I, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|402550754|pdb|4GK7|W Chain W, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|409973868|pdb|4FZC|I Chain I, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973882|pdb|4FZC|W Chain W, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973896|pdb|4FZG|I Chain I, 20s Yeast Proteasome In Complex With Glidobactin
gi|409973910|pdb|4FZG|W Chain W, 20s Yeast Proteasome In Complex With Glidobactin
Length = 204
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 83/122 (68%), Gaps = 2/122 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VAM GK+C AIA D RLG Q ++ F++I + +F+G++GLATD TL +
Sbjct: 7 NGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFH-YGHVFLGITGLATDVTTLNEM 65
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
++ LY+L+EER ++PETF LVS+ LYE+RFGPYF PV+AG+ S KPFI D
Sbjct: 66 FRYKTNLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGFDL 125
Query: 126 IG 127
IG
Sbjct: 126 IG 127
>gi|255712483|ref|XP_002552524.1| KLTH0C06886p [Lachancea thermotolerans]
gi|238933903|emb|CAR22086.1| KLTH0C06886p [Lachancea thermotolerans CBS 6340]
Length = 205
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 84/122 (68%), Gaps = 2/122 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VAM GK+C AIA D RLG Q +A +F++I + +F+GL+GLATD TL +
Sbjct: 8 NGGIVVAMTGKDCVAIACDLRLGSQSLGVANNFEKIFH-YGHVFLGLTGLATDVTTLSET 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
++ +Y+L+E+R ++PETF LVS+ LYEKRFGPYF PV+AG+ S KP+I D
Sbjct: 67 FRYKTNMYKLKEDRFIEPETFTQLVSSTLYEKRFGPYFTGPVVAGINSRTGKPYISGFDL 126
Query: 126 IG 127
IG
Sbjct: 127 IG 128
>gi|253744760|gb|EET00912.1| Proteasome subunit beta type 3 [Giardia intestinalis ATCC 50581]
Length = 207
Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 86/127 (67%), Gaps = 1/127 (0%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIA-TDFQRISKIHDRLFIGLSGLATDS 60
+I EYNGSAL+ + GK+C A+A+D+RLG QT+ +RI ++ +GL+GL TD
Sbjct: 3 NIWEYNGSALIGIKGKDCVALAADKRLGCSYQTLTIGKEERIFRLSQSCLLGLAGLQTDV 62
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
T Y+++ + LY L+E+R+++P A ++S+ LY+ RFGPYF P+IAG + KP++
Sbjct: 63 LTTYRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEADGKPYL 122
Query: 121 CTMDSIG 127
MD+IG
Sbjct: 123 GAMDTIG 129
>gi|308160496|gb|EFO62983.1| Proteasome subunit beta type 3 [Giardia lamblia P15]
Length = 207
Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 86/127 (67%), Gaps = 1/127 (0%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIA-TDFQRISKIHDRLFIGLSGLATDS 60
+I EYNGSAL+ + GK+C A+A+D+RLG QT+ +RI ++ +GL+GL TD
Sbjct: 3 NIWEYNGSALIGIKGKDCVALAADKRLGCSYQTLTIGKEERIFRLSQSCLLGLAGLQTDV 62
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
T Y+++ + LY L+E+R+++P A ++S+ LY+ RFGPYF P+IAG + KP++
Sbjct: 63 LTTYRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEADGKPYL 122
Query: 121 CTMDSIG 127
MD+IG
Sbjct: 123 GAMDTIG 129
>gi|325092329|gb|EGC45639.1| proteasome component [Ajellomyces capsulatus H88]
Length = 192
Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 80/115 (69%), Gaps = 1/115 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ F +I ++GL+GLATD ++ L ++ +
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNSFPKIFNYAPSTYLGLTGLATDVSSVSDLLRYKVNM 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDSIG 127
Y+LREER + P+T A+L+S+ LYEKRFGPYF PV+AG+ S KPFIC DSIG
Sbjct: 61 YRLREERQISPQTLANLISSSLYEKRFGPYFVSPVLAGINSTTGKPFICGFDSIG 115
>gi|154308476|ref|XP_001553574.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
Length = 198
Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 81/115 (70%), Gaps = 1/115 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I +++GL+GLATD T+ ++ +
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFSYGPSVYLGLTGLATDVSTVSDLFRYKVNM 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPFICTMDSIG 127
Y+LREER++ P T A+LVS+ LYE+RFGP+F PV+AGL + KPFIC DSIG
Sbjct: 61 YRLREERNISPTTMANLVSSSLYERRFGPFFVSPVVAGLDQKTGKPFICGFDSIG 115
>gi|66358224|ref|XP_626290.1| possible proteasome component [Cryptosporidium parvum Iowa II]
gi|46228012|gb|EAK88932.1| possible proteasome component [Cryptosporidium parvum Iowa II]
Length = 204
Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 82/127 (64%), Gaps = 1/127 (0%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQ-LQTIATDFQRISKIHDRLFIGLSGLATDS 60
SI YNG A++AM GK C A A+D RLG +TI+TDF ++ + + +G SGLATD
Sbjct: 1 SIMTYNGGAILAMKGKECVAFATDMRLGSNGYRTISTDFDKVIRPSSKTLMGFSGLATDI 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
TL + F+ LY LREER++ + + + +++LY KRF PYF +P++AGL + + PFI
Sbjct: 61 HTLTNLIKFKTNLYHLREEREIGVKALSHMTASILYSKRFSPYFVEPIVAGLDNNNVPFI 120
Query: 121 CTMDSIG 127
D IG
Sbjct: 121 AGYDLIG 127
>gi|444323175|ref|XP_004182228.1| hypothetical protein TBLA_0I00480 [Tetrapisispora blattae CBS 6284]
gi|387515275|emb|CCH62709.1| hypothetical protein TBLA_0I00480 [Tetrapisispora blattae CBS 6284]
Length = 205
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 82/122 (67%), Gaps = 2/122 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VAM GK+C AIA D RLG Q ++ +F++I + +F G++GLATD TL +
Sbjct: 8 NGGVVVAMTGKDCVAIACDLRLGSQSLGVSNNFEKIFH-YGHVFFGITGLATDVTTLNEL 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
++ +Y+L+E R ++PETF +LVS+ LY KRFGPYF PV+AGL S KP+I D
Sbjct: 67 FRYKTNMYKLKENRSIEPETFTNLVSSTLYSKRFGPYFVGPVVAGLNSKTGKPYIAGFDL 126
Query: 126 IG 127
IG
Sbjct: 127 IG 128
>gi|258566702|ref|XP_002584095.1| proteasome component PUP3 [Uncinocarpus reesii 1704]
gi|237905541|gb|EEP79942.1| proteasome component PUP3 [Uncinocarpus reesii 1704]
Length = 192
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 81/115 (70%), Gaps = 1/115 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I ++GL+GLATD ++ + ++ L
Sbjct: 1 MVGKDCVAIACDLRLGMQALTVSNNFPKIFNYAPSTYLGLTGLATDVSSVSDLMRYKVNL 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTMDSIG 127
Y+LREER + P+T A+LVS+ LYEKRFGP+F PV+AG++ KPFIC DSIG
Sbjct: 61 YRLREERQISPQTLANLVSSSLYEKRFGPWFVSPVLAGINHTTGKPFICGFDSIG 115
>gi|17380218|sp|Q9N9W8.1|PSB3_GIALA RecName: Full=Proteasome subunit beta type-3
gi|9367751|emb|CAB97490.1| 20S proteasome subunit [Giardia intestinalis]
Length = 207
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 86/127 (67%), Gaps = 1/127 (0%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIA-TDFQRISKIHDRLFIGLSGLATDS 60
+I EYNGSAL+ + G +C A+A+D+RLG QT+ + +RI ++ +GL+GL TD
Sbjct: 3 NIWEYNGSALIGIKGXDCVALAADKRLGCSYQTLTIGNEERIFRLSQSCLLGLAGLQTDV 62
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
T Y+++ + LY L+E+R+++P A ++S+ LY+ RFGPYF P+IAG + KP++
Sbjct: 63 LTTYRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEADGKPYL 122
Query: 121 CTMDSIG 127
MD+IG
Sbjct: 123 GAMDTIG 129
>gi|401626020|gb|EJS43988.1| pup3p [Saccharomyces arboricola H-6]
Length = 205
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 82/122 (67%), Gaps = 2/122 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VAM GK+C AIA D RLG Q ++ F++I + +F G++GLA+D TL +
Sbjct: 8 NGGVVVAMAGKDCVAIACDLRLGSQSLGVSNKFEKIFH-YGHVFFGVTGLASDVTTLNEM 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
++ LY+LRE+R ++PETF LVS+ LYE+RFGPYF PV+AG+ S KPFI D
Sbjct: 67 FRYKTNLYKLREDRAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGFDL 126
Query: 126 IG 127
IG
Sbjct: 127 IG 128
>gi|212537587|ref|XP_002148949.1| proteasome component Pup3, putative [Talaromyces marneffei ATCC
18224]
gi|210068691|gb|EEA22782.1| proteasome component Pup3, putative [Talaromyces marneffei ATCC
18224]
Length = 192
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 80/115 (69%), Gaps = 1/115 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I ++G++GLATD T+ ++ +
Sbjct: 1 MVGKDCVAIACDLRLGMQALTVSNNFPKIFNYAPSTYLGITGLATDVTTVSDLFRYKVNM 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTMDSIG 127
Y+LREER + P+T A+LVS+ LYE+RFGPYF PVIAG++ KPFIC DSIG
Sbjct: 61 YRLREERHISPQTLANLVSSSLYERRFGPYFVSPVIAGINHTTGKPFICGFDSIG 115
>gi|156095029|ref|XP_001613550.1| 20S proteasome subunit beta-3 [Plasmodium vivax Sal-1]
gi|148802424|gb|EDL43823.1| 20S proteasome subunit beta-3, putative [Plasmodium vivax]
Length = 218
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 88/141 (62%), Gaps = 13/141 (9%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQ-LQTIATDFQRISKIHDRLFIGLSGLATDS 60
SI YNG ++ M G C AIA D RLG T++T+F +I K++D +++GLSGLATD
Sbjct: 3 SIFNYNGGCVLGMSGAQCVAIACDLRLGANNFTTVSTNFTKIFKMNDYVYVGLSGLATDI 62
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAG------LSD 114
QTLY+ L +R LY++R+E M + FA+++S++LY RF PYF P++ G L D
Sbjct: 63 QTLYELLRYRVNLYEIRQETPMDIDCFANMLSSILYANRFSPYFVNPIVVGFRVQHTLDD 122
Query: 115 EDK------PFICTMDSIGAK 129
E K P++ D IGAK
Sbjct: 123 EGKKVCSFEPYLTAYDLIGAK 143
>gi|302306791|ref|NP_983166.2| ABR217Cp [Ashbya gossypii ATCC 10895]
gi|299788687|gb|AAS50990.2| ABR217Cp [Ashbya gossypii ATCC 10895]
gi|374106369|gb|AEY95279.1| FABR217Cp [Ashbya gossypii FDAG1]
Length = 205
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 83/122 (68%), Gaps = 2/122 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VAM GK+C AIA D RLG Q ++ F++I +F+GL+GLATD TLY+
Sbjct: 8 NGGIVVAMTGKDCVAIACDLRLGSQSLGVSNRFEKIFNFG-HVFLGLTGLATDVTTLYET 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
++ +Y+++E+R ++P TF+ LVS+ LYE+RFGPYF PV+AG+ S KP+I D
Sbjct: 67 FRYKTNMYKMQEDRPIEPNTFSQLVSSTLYERRFGPYFVGPVVAGIHSKTKKPYIAGFDL 126
Query: 126 IG 127
IG
Sbjct: 127 IG 128
>gi|403214964|emb|CCK69464.1| hypothetical protein KNAG_0C03600 [Kazachstania naganishii CBS
8797]
Length = 205
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 82/122 (67%), Gaps = 2/122 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG VAM GK+C AIA D RLG Q ++ +F++I + +F+G++GLATD TL
Sbjct: 8 NGGICVAMAGKDCVAIACDLRLGSQSLGVSNNFEKIFH-YGHVFMGMTGLATDVLTLSDV 66
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
++ LY+LRE+R ++PETF LVS+ LYE+RFGPYF PV+AG+ S KPFI D
Sbjct: 67 FRYKTNLYKLREDRMIEPETFTQLVSSTLYERRFGPYFVGPVVAGINSKTGKPFIAGFDL 126
Query: 126 IG 127
IG
Sbjct: 127 IG 128
>gi|67606993|ref|XP_666789.1| proteasome component [Cryptosporidium hominis TU502]
gi|54657844|gb|EAL36555.1| proteasome component [Cryptosporidium hominis]
Length = 202
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 79/123 (64%), Gaps = 1/123 (0%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQ-LQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
YNG A++AM GK C A A+D RLG +TI TDF ++ + + +G SGLATD TL
Sbjct: 3 YNGGAILAMKGKECVAFATDMRLGSNGYRTIGTDFDKVIRPSSKTLMGFSGLATDIHTLT 62
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ F+ LY LREER++ + + + +++LY KRF PYF +P++AGL + + PFI D
Sbjct: 63 NLIKFKTNLYHLREEREIGVKALSHMTASILYSKRFSPYFVEPIVAGLDNNNVPFIAGYD 122
Query: 125 SIG 127
IG
Sbjct: 123 LIG 125
>gi|156088863|ref|XP_001611838.1| proteasome A-type and B-type family protein [Babesia bovis]
gi|154799092|gb|EDO08270.1| proteasome A-type and B-type family protein [Babesia bovis]
Length = 205
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 82/127 (64%), Gaps = 2/127 (1%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQ-TIATDFQRISKIHDRLFIGLSGLATDSQ 61
I YNG A+VAMVG C AIA D+RLG+ Q TI+++F + K+ D + GLATD Q
Sbjct: 4 IESYNGGAVVAMVGNGCVAIACDKRLGMNGQHTISSNFPKAFKVTDTAYFAACGLATDIQ 63
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
T+ + F+ +Y LR E++M +T A +V +LLY +RFGP+F V+AGL D+D P I
Sbjct: 64 TMKSEIEFKTNMYALRCEKNMGVKTLAHMVGSLLYSRRFGPWFVSSVVAGL-DKDTPHIY 122
Query: 122 TMDSIGA 128
D IGA
Sbjct: 123 CFDLIGA 129
>gi|67528502|ref|XP_662053.1| hypothetical protein AN4449.2 [Aspergillus nidulans FGSC A4]
gi|40741024|gb|EAA60214.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
gi|259482734|tpe|CBF77496.1| TPA: proteasome component Pup3, putative (AFU_orthologue;
AFUA_4G07420) [Aspergillus nidulans FGSC A4]
Length = 192
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 79/115 (68%), Gaps = 1/115 (0%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
MVGK+C AIA D RLG+Q T++ +F +I ++GL+GLATD T+ + +
Sbjct: 1 MVGKDCVAIACDLRLGMQALTVSNNFPKIFNYAPGTYLGLTGLATDVSTVSDLFRLKVNM 60
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTMDSIG 127
Y+LREER + P+T A+LVS+ LYE+RFG YF PVIAG+++ KPFIC DSIG
Sbjct: 61 YRLREERHIAPQTLANLVSSTLYERRFGAYFVSPVIAGINNTTGKPFICGFDSIG 115
>gi|384483641|gb|EIE75821.1| hypothetical protein RO3G_00525 [Rhizopus delemar RA 99-880]
Length = 172
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 74/123 (60%), Gaps = 26/123 (21%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+YNG ++VAMVGK+C AIA+D+RLG Q T++TDFQ+I K D+ FIGL GLATD TL
Sbjct: 2 QYNGGSVVAMVGKDCVAIAADKRLGAQFMTVSTDFQKIFKATDKTFIGLPGLATDVLTLA 61
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
R F+ + FGPYF +PV+AGL ++KPFIC MD
Sbjct: 62 DRFRFKTNI--------------------------FGPYFVEPVVAGLGKDNKPFICAMD 95
Query: 125 SIG 127
IG
Sbjct: 96 LIG 98
>gi|198472849|ref|XP_002133126.1| GA28829 [Drosophila pseudoobscura pseudoobscura]
gi|198139188|gb|EDY70528.1| GA28829 [Drosophila pseudoobscura pseudoobscura]
Length = 204
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 82/125 (65%), Gaps = 4/125 (3%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQL---QTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
G ++AM GK C AIA+D RLG Q IA DF+++ K+ R+F+GL+G D T++
Sbjct: 4 GGCVLAMQGKECVAIATDHRLGCGSNPGQRIAGDFKKVFKVGPRMFLGLTGFLADVNTVW 63
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTM 123
RL +R LY+++E +M PE F +++S LLYE RFGPY Q V+A L +P+IC++
Sbjct: 64 DRLQYRQNLYEIKESCEMTPEAFTTMLSNLLYEHRFGPYHVQAVVAALDPLALRPYICSV 123
Query: 124 DSIGA 128
D IGA
Sbjct: 124 DLIGA 128
>gi|429329532|gb|AFZ81291.1| proteasome subunit beta type 3, putative [Babesia equi]
Length = 217
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 83/138 (60%), Gaps = 12/138 (8%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQ-TIATDFQRISKIHDRLFIGLSGLATDSQ 61
I+ YNG A+VAMVG C AIA D+RLG+ Q TI T+F + ++ D+ F SGLATD Q
Sbjct: 4 ISSYNGGAVVAMVGDQCVAIACDKRLGMNQQITIGTNFPKAFRVTDKSFFAASGLATDVQ 63
Query: 62 TLY-----------QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIA 110
T+Y + + FR +Y+ E M +++VS +LY +RF P+F + V+A
Sbjct: 64 TMYVNHPCTPCCRKEEIEFRVNMYEASSESKMSINKLSNMVSTMLYSRRFSPWFVEAVVA 123
Query: 111 GLSDEDKPFICTMDSIGA 128
GL ++KPFI D IGA
Sbjct: 124 GLDAQNKPFISCFDLIGA 141
>gi|399218578|emb|CCF75465.1| unnamed protein product [Babesia microti strain RI]
Length = 192
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Query: 14 MVGKNCFAIASDRRLGV-QLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHK 72
M G C +I SD RLGV + TI DF ++ KI+++ F G SGLATD Q++ + L F+ K
Sbjct: 1 MCGHECVSIGSDLRLGVNRFTTIGNDFPKVFKINNKCFFGSSGLATDIQSILKELKFKIK 60
Query: 73 LYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGA 128
+++L +ERD+ ++ +V+ +LY +RFGP+F P++AGL D+++PFI + D IGA
Sbjct: 61 IFELEQERDIGIQSLGHVVANMLYSRRFGPWFISPIVAGLDDKNRPFISSYDLIGA 116
>gi|363752627|ref|XP_003646530.1| hypothetical protein Ecym_4692 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890165|gb|AET39713.1| hypothetical protein Ecym_4692 [Eremothecium cymbalariae
DBVPG#7215]
Length = 191
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 78/115 (67%), Gaps = 2/115 (1%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
M GK+C AIA D RLG Q ++ F++I + +F+GL+GLATD TLY+ ++ L
Sbjct: 1 MTGKDCVAIACDLRLGSQSLGVSNRFEKIFN-YGHVFVGLTGLATDVTTLYETFRYKTNL 59
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTMDSIG 127
Y+LRE+R ++P TF+ LVS+ LYEKRFGPYF PV+AG+ KP+I D IG
Sbjct: 60 YKLREDRPIEPSTFSHLVSSTLYEKRFGPYFVGPVVAGIDTISQKPYIAGFDLIG 114
>gi|195161717|ref|XP_002021708.1| GL26359 [Drosophila persimilis]
gi|194103508|gb|EDW25551.1| GL26359 [Drosophila persimilis]
Length = 204
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 81/125 (64%), Gaps = 4/125 (3%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQL---QTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
G ++AM G C AIA+D RLG Q IA DF+++ K+ R+F+GL+G D T++
Sbjct: 4 GGCVLAMQGNECVAIATDHRLGCGSNPGQRIAGDFKKVFKVGPRMFLGLTGFLADVNTVW 63
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTM 123
RL +R LY+++E +M PE F +++S LLYE RFGPY Q V+A L +P+IC++
Sbjct: 64 DRLQYRQNLYEIKESCEMTPEAFTTMLSNLLYEHRFGPYHVQAVVAALDPLALRPYICSV 123
Query: 124 DSIGA 128
D IGA
Sbjct: 124 DLIGA 128
>gi|378754521|gb|EHY64552.1| hypothetical protein NERG_02362 [Nematocida sp. 1 ERTm2]
Length = 204
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 82/127 (64%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EY G + +AMVGK+ I +D+R G T+ ++F R+ KI DR+ + L+G D
Sbjct: 1 MSIQEYYGGSSLAMVGKDAIVITADKRFGNNASTLHSNFTRLYKITDRIILSLTGFVPDC 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
Q LY+ L +++L ++R+++P+ F+SL+S +LY KRF P+ P+IAG E+ P +
Sbjct: 61 QVLYKTLRKHVTMFKLSQQREIEPKEFSSLLSYILYSKRFSPFLISPLIAGFDRENNPHV 120
Query: 121 CTMDSIG 127
TMD IG
Sbjct: 121 YTMDLIG 127
>gi|323309416|gb|EGA62633.1| Pup3p [Saccharomyces cerevisiae FostersO]
Length = 191
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 78/115 (67%), Gaps = 2/115 (1%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
M GK+C AIA D RLG Q ++ F++I + +F+G++GLATD TL + ++ L
Sbjct: 1 MTGKDCVAIACDLRLGSQSLGVSNKFEKIFH-YGHVFLGITGLATDVTTLNEMFRYKTNL 59
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDSIG 127
Y+L+EER ++PETF LVS+ LYE+RFGPYF PV+AG+ S KPFI D IG
Sbjct: 60 YKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGFDLIG 114
>gi|167393450|ref|XP_001740580.1| proteasome subunit beta type-3 [Entamoeba dispar SAW760]
gi|165895272|gb|EDR23004.1| proteasome subunit beta type-3, putative [Entamoeba dispar SAW760]
Length = 205
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 80/127 (62%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
IT Y+G A+V M GK C AIA+D R G++ Q + +F ++ +++ G +GL +D Q
Sbjct: 4 DITYYSGGAVVGMAGKGCVAIAADNRYGLKYQFASANFHKVFQVNKYCLFGGAGLFSDVQ 63
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
T+ +++ + LY+LRE D+ PE + + +LY+KRF PY+ P+IAG+ D ++C
Sbjct: 64 TMAEKVKYHANLYRLREGHDIGPEQLLNSTAHMLYKKRFQPYYMSPIIAGIDDNGNSYVC 123
Query: 122 TMDSIGA 128
+ D IG+
Sbjct: 124 SYDYIGS 130
>gi|387593397|gb|EIJ88421.1| hypothetical protein NEQG_01111 [Nematocida parisii ERTm3]
gi|387597054|gb|EIJ94674.1| hypothetical protein NEPG_00197 [Nematocida parisii ERTm1]
Length = 204
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 80/127 (62%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI +Y G + +AMVGK+ I +D+R G T+ ++F R+ K+ DRL + L+G D
Sbjct: 1 MSIQQYYGGSSLAMVGKDAIVITADKRFGNNASTLHSNFTRLYKMTDRLILSLTGFVPDC 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
Q LY+ L +++L E+R+++P+ FA L+S +LY KRF P+ P+I G E+ P +
Sbjct: 61 QILYKTLRKHVNMFKLNEQREIEPKEFACLLSYILYSKRFSPFLISPLIVGFDRENNPHV 120
Query: 121 CTMDSIG 127
TMD IG
Sbjct: 121 YTMDLIG 127
>gi|67481017|ref|XP_655858.1| proteasome beta subunit [Entamoeba histolytica HM-1:IMSS]
gi|56473029|gb|EAL50477.1| proteasome beta subunit, putative [Entamoeba histolytica HM-1:IMSS]
gi|407034951|gb|EKE37462.1| proteasome subunit beta type 3, putative [Entamoeba nuttalli P19]
gi|449704564|gb|EMD44784.1| proteasome beta subunit, putative [Entamoeba histolytica KU27]
Length = 205
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 80/127 (62%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
I+ Y+G A+V M GK C AIA+D R G++ Q + +F ++ +++ G +GL +D Q
Sbjct: 4 DISYYSGGAVVGMAGKGCVAIAADNRYGLKYQFASANFHKVFQVNKYCLFGGAGLFSDVQ 63
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
T+ +++ + LY+LRE D+ PE + + +LY+KRF PY+ P+IAG+ D ++C
Sbjct: 64 TMAEKVKYHANLYRLREGHDIGPEQLLNSTAHMLYKKRFQPYYMSPIIAGIDDNGNSYVC 123
Query: 122 TMDSIGA 128
+ D IG+
Sbjct: 124 SYDYIGS 130
>gi|443896401|dbj|GAC73745.1| 20S proteasome, regulatory subunit beta type PSMB3/PUP3
[Pseudozyma antarctica T-34]
Length = 99
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 74/99 (74%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG ++VA GKNC IASD RLG Q T+A +F ++ ++ ++ +IGL GLA+D
Sbjct: 1 MSIMEYNGGSVVAAKGKNCVVIASDLRLGQQAMTVACNFDKVFRVTEKTYIGLPGLASDV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKR 99
TL +R +R +Y+++EER+++PE FA+LVS+ LYE+R
Sbjct: 61 STLRERFRYRVNMYKMKEEREIEPEIFANLVSSTLYERR 99
>gi|68069127|ref|XP_676474.1| beta3 proteasome subunit [Plasmodium berghei strain ANKA]
gi|56496189|emb|CAH97578.1| beta3 proteasome subunit, putative [Plasmodium berghei]
Length = 204
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 81/129 (62%), Gaps = 13/129 (10%)
Query: 14 MVGKNCFAIASDRRLGVQ-LQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHK 72
M G C AIA D RLG T++T+F +I KI+D +++GLSGLATD Q+LY+ L +R
Sbjct: 1 MTGSQCVAIACDLRLGSNSFTTVSTNFTKIFKINDHIYVGLSGLATDIQSLYELLRYRVN 60
Query: 73 LYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-----DED-------KPFI 120
LYQ+R+E DM + F++++S +LY RF PYF P++ G DE+ +P++
Sbjct: 61 LYQIRQETDMNIDCFSNMLSNILYSNRFSPYFVNPIVVGFKVNTHIDENGNKTNVYEPYL 120
Query: 121 CTMDSIGAK 129
D IGAK
Sbjct: 121 NAYDLIGAK 129
>gi|389612013|dbj|BAM19540.1| proteasome beta3 subunit [Papilio xuthus]
Length = 96
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 73/92 (79%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MS YNG A+VAM G++C AIA+D+R G+Q QTI+T+F ++ ++ L++GL GLATD+
Sbjct: 1 MSXLAYNGGAVVAMKGQDCVAIATDKRFGIQAQTISTNFPKVYQMGPTLYVGLPGLATDT 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVS 92
QT++QRL FR LY+L+E R M+P+TF++++S
Sbjct: 61 QTVFQRLKFRMNLYELKENRVMRPKTFSAMLS 92
>gi|430813166|emb|CCJ29467.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 179
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 81/115 (70%), Gaps = 3/115 (2%)
Query: 14 MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL 73
M+GK+C AIASD RLG + DF +I + +++++GLSGLATD TL R + L
Sbjct: 1 MLGKDCVAIASDLRLGKGGLMVTNDFSKIIPVTEKIYMGLSGLATDIVTLLIR--YNVNL 58
Query: 74 YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDSIG 127
Y+L+EER ++P+T A+L+S +LY+KRF YF P++AGL S +PFIC +D+IG
Sbjct: 59 YKLQEERVIEPKTLANLLSTVLYKKRFATYFVMPILAGLDSKTGRPFICGLDNIG 113
>gi|82704967|ref|XP_726772.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23482323|gb|EAA18337.1| 7006-8626 [Plasmodium yoelii yoelii]
Length = 204
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 81/129 (62%), Gaps = 13/129 (10%)
Query: 14 MVGKNCFAIASDRRLGVQ-LQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHK 72
M G C AIA D RLG T++T+F +I KI+D +++GLSGLATD Q+LY+ L +R
Sbjct: 1 MSGSQCVAIACDLRLGSNSFTTVSTNFTKIFKINDHIYVGLSGLATDIQSLYELLRYRVN 60
Query: 73 LYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-----DED-------KPFI 120
LYQ+R+E DM + F++++S +LY RF PYF P++ G DE+ +P++
Sbjct: 61 LYQIRQETDMNIDCFSNMLSNILYSNRFSPYFVNPIVVGFKVNTHIDENGNKINVYEPYL 120
Query: 121 CTMDSIGAK 129
D IGAK
Sbjct: 121 NAYDLIGAK 129
>gi|300707553|ref|XP_002995980.1| hypothetical protein NCER_101004 [Nosema ceranae BRL01]
gi|239605230|gb|EEQ82309.1| hypothetical protein NCER_101004 [Nosema ceranae BRL01]
Length = 205
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 85/126 (67%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
I EY G +++AM+GK+ +I +D+RLG ++ +F ++ +++RLF G +GL +D++
Sbjct: 4 IAEYYGGSILAMIGKSSVSIVTDKRLGAGPISVGKNFTKVYTLNNRLFFGFTGLVSDAEI 63
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
LY+++ + L+ +RDM+P ++L+S +LY+KR PY+ ++ G++ ++KP+ +
Sbjct: 64 LYKKIRKNYNLFVQDNKRDMEPSELSNLISFILYQKRLQPYYVSTIVCGITSDNKPYASS 123
Query: 123 MDSIGA 128
MD IGA
Sbjct: 124 MDCIGA 129
>gi|124505797|ref|XP_001351012.1| beta3 proteasome subunit, putative [Plasmodium falciparum 3D7]
gi|23510655|emb|CAD49040.1| beta3 proteasome subunit, putative [Plasmodium falciparum 3D7]
Length = 204
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 82/129 (63%), Gaps = 13/129 (10%)
Query: 14 MVGKNCFAIASDRRLGVQ-LQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHK 72
M G NC AIA D RLG T++T F +I K+++ +++GLSGLATD QTLY+ L +R
Sbjct: 1 MSGSNCVAIACDLRLGANTFTTVSTKFSKIFKMNNNVYVGLSGLATDIQTLYEILRYRVN 60
Query: 73 LYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-----DED-------KPFI 120
LY++R++ +M E FA+++S++LY RF PYF P++ G DE+ +P++
Sbjct: 61 LYEVRQDAEMDVECFANMLSSILYSNRFSPYFVNPIVVGFKLKHYVDEEGEKKVNYEPYL 120
Query: 121 CTMDSIGAK 129
D IGAK
Sbjct: 121 TAYDLIGAK 129
>gi|70944654|ref|XP_742236.1| beta3 proteasome subunit [Plasmodium chabaudi chabaudi]
gi|56521097|emb|CAH75996.1| beta3 proteasome subunit, putative [Plasmodium chabaudi chabaudi]
Length = 204
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 81/129 (62%), Gaps = 13/129 (10%)
Query: 14 MVGKNCFAIASDRRLGVQ-LQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHK 72
M G C AIA D RLG T++T+F +I KI+D +++GLSGLATD Q+LY+ L +R
Sbjct: 1 MSGSQCVAIACDLRLGSNSFTTVSTNFTKIFKINDHIYVGLSGLATDIQSLYELLRYRVN 60
Query: 73 LYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-----DED-------KPFI 120
LYQ+R+E +M + F++++S +LY RF PYF P++ G DE+ +P++
Sbjct: 61 LYQIRQETEMNIDCFSNMLSNILYSNRFSPYFVNPIVVGFKVTTQVDENGNKTNVYEPYL 120
Query: 121 CTMDSIGAK 129
D IGAK
Sbjct: 121 NAYDLIGAK 129
>gi|209878806|ref|XP_002140844.1| proteasome subunit beta type 3 [Cryptosporidium muris RN66]
gi|209556450|gb|EEA06495.1| proteasome subunit beta type 3, putative [Cryptosporidium muris
RN66]
Length = 194
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 74/117 (63%), Gaps = 1/117 (0%)
Query: 12 VAMVGKNCFAIASDRRLGV-QLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFR 70
+AM GKNC AIA+D R+G Q TI+T F ++ + IG SGLATD T+ + F
Sbjct: 1 MAMKGKNCIAIATDMRMGFNQFSTISTSFNKVINPSSKTLIGFSGLATDIHTVSSTIKFH 60
Query: 71 HKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
LY+LREER++ + + + ++LLY KRF PY +P++AGL ++P++ D IG
Sbjct: 61 TNLYKLREEREIDAKALSHMTASLLYSKRFSPYLVEPIVAGLDKNNEPYLAGYDLIG 117
>gi|405971643|gb|EKC36468.1| Proteasome subunit beta type-3 [Crassostrea gigas]
Length = 161
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 66/85 (77%), Gaps = 1/85 (1%)
Query: 48 RLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQP 107
RL+IGL GLATD QT++QRL FR LY+LRE R +KP+TF S+VS LLYE+RFGPYF +P
Sbjct: 4 RLYIGLPGLATDVQTVHQRLQFRLNLYELRENRRIKPKTFLSMVSNLLYERRFGPYFVEP 63
Query: 108 VIAGLSDED-KPFICTMDSIGAKYV 131
VIAGL + +PFI +MD IG V
Sbjct: 64 VIAGLDPKTFEPFIASMDLIGCPMV 88
>gi|389581871|dbj|GAB64592.1| 20S proteasome subunit beta-3 [Plasmodium cynomolgi strain B]
Length = 204
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 81/129 (62%), Gaps = 13/129 (10%)
Query: 14 MVGKNCFAIASDRRLGVQ-LQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHK 72
M G C AIA D RLG TI+T+F +I K++D +++GLSGLATD QTLY+ L +R
Sbjct: 1 MSGAQCVAIACDLRLGANNFTTISTNFTKIFKMNDYVYVGLSGLATDIQTLYELLRYRVN 60
Query: 73 LYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAG------LSDEDK------PFI 120
LY++R+E M + FA+++S++LY RF PYF P++ G + DE K P++
Sbjct: 61 LYEIRQESPMDIDCFANMLSSILYANRFSPYFVNPIVVGFRVKHTIDDEGKKISTFEPYL 120
Query: 121 CTMDSIGAK 129
D IGAK
Sbjct: 121 TAYDLIGAK 129
>gi|70937358|ref|XP_739497.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56516540|emb|CAH84497.1| hypothetical protein PC301073.00.0 [Plasmodium chabaudi chabaudi]
Length = 128
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 80/128 (62%), Gaps = 13/128 (10%)
Query: 14 MVGKNCFAIASDRRLGVQ-LQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHK 72
M G C AIA D RLG T++T+F +I KI+D +++GLSGLATD Q+LY+ L +R
Sbjct: 1 MSGSQCVAIACDLRLGSNSFTTVSTNFTKIFKINDHIYVGLSGLATDIQSLYELLRYRVN 60
Query: 73 LYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-----DED-------KPFI 120
LYQ+R+E +M + F++++S +LY RF PYF P++ G DE+ +P++
Sbjct: 61 LYQIRQETEMNIDCFSNMLSNILYSNRFSPYFVNPIVVGFKVTTQVDENGNKTNVYEPYL 120
Query: 121 CTMDSIGA 128
D IGA
Sbjct: 121 NAYDLIGA 128
>gi|19073955|ref|NP_584561.1| 26S PROTEASOME BETA SUBUNIT, theta chain [Encephalitozoon cuniculi
GB-M1]
gi|19068597|emb|CAD25065.1| 26S PROTEASOME BETA SUBUNIT, theta chain [Encephalitozoon cuniculi
GB-M1]
gi|449329321|gb|AGE95594.1| 26S proteasome beta subunit, theta chain [Encephalitozoon cuniculi]
Length = 205
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 82/129 (63%), Gaps = 1/129 (0%)
Query: 1 MSITE-YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATD 59
MS TE + G +++AM AI D+RLG+ T++ DF RI +I RL++GL D
Sbjct: 1 MSDTETFYGGSILAMASSKGVAIMCDKRLGMSSITVSKDFTRIHRIGPRLYVGLPAFVPD 60
Query: 60 SQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPF 119
+Q L +++ + L++L +R+M+PE +S++S LLY KR PY P++AGL+ + KP+
Sbjct: 61 TQVLLRKIRKNYNLFRLEHQREMEPEELSSMISFLLYSKRETPYITAPIVAGLTSDGKPY 120
Query: 120 ICTMDSIGA 128
I MD IG+
Sbjct: 121 ISGMDCIGS 129
>gi|221052302|ref|XP_002257727.1| beta3 proteasome subunit [Plasmodium knowlesi strain H]
gi|193807558|emb|CAQ38063.1| beta3 proteasome subunit, putative [Plasmodium knowlesi strain H]
Length = 204
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 80/129 (62%), Gaps = 13/129 (10%)
Query: 14 MVGKNCFAIASDRRLGVQ-LQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHK 72
M G C AIA D RLG TI+T+F ++ K++D +++GLSGLATD QTLY+ L +R
Sbjct: 1 MSGAQCVAIACDLRLGANNFTTISTNFTKVFKMNDYVYVGLSGLATDIQTLYELLRYRVN 60
Query: 73 LYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAG------LSDEDK------PFI 120
LY++R+E M + FA+++S++LY RF PYF P++ G DE K P++
Sbjct: 61 LYEIRQETPMDIDCFANMLSSILYANRFSPYFVNPIVVGFRVKHTFDDEGKKIRTFEPYL 120
Query: 121 CTMDSIGAK 129
D IGAK
Sbjct: 121 TAYDLIGAK 129
>gi|160331191|ref|XP_001712303.1| prsB3 [Hemiselmis andersenii]
gi|159765750|gb|ABW97978.1| prsB3 [Hemiselmis andersenii]
Length = 201
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 82/125 (65%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+YNG +++ M GKNCFAIASD R G+ T +I KIH++LF+G+ GL D T+
Sbjct: 2 DYNGGSIIIMGGKNCFAIASDLRFGLDNFTKGQKTPKIFKIHEKLFLGMIGLFGDISTIR 61
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
Q L ++ +Y L++ ++P F++++S LLY RF P+ + V+AGL ++++ FI + D
Sbjct: 62 QILEYKTSIYLLKKSERIQPLGFSNILSNLLYHHRFAPFLVETVLAGLDEKNRLFIESKD 121
Query: 125 SIGAK 129
+GAK
Sbjct: 122 ILGAK 126
>gi|344243208|gb|EGV99311.1| Proteasome subunit beta type-3 [Cricetulus griseus]
Length = 95
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 67/95 (70%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
M I YNG A++A+ GKNC AIA DRR G+Q Q + TDFQ+I I DRL+IGL+ LAT
Sbjct: 1 MYIMSYNGGAVMALKGKNCVAIAVDRRFGIQAQMVTTDFQKIFPIGDRLYIGLAVLATYV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALL 95
QT+ QRL F LY+L+E R +KP T S+V+ LL
Sbjct: 61 QTVAQRLKFLLNLYELKEGRQIKPYTLTSMVANLL 95
>gi|440492147|gb|ELQ74741.1| 20S proteasome, regulatory subunit beta type PSMB3/PUP3
[Trachipleistophora hominis]
Length = 205
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 79/126 (62%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
I+ + G +++A+ GK+ I SD+RLG T++T R+ K+ D++++G++ D Q
Sbjct: 3 DISTFYGGSVLALTGKHSAIIVSDKRLGNNSITVSTQHDRVYKMSDKVYVGMTLFVPDVQ 62
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
L ++L L+++ E R + P+ F+SL+S LY RF P F PV+AG+ DKP+IC
Sbjct: 63 MLVRKLRMEVNLFEIEENRRIDPDEFSSLLSYTLYSHRFSPRFVDPVVAGIDAHDKPYIC 122
Query: 122 TMDSIG 127
+MD +G
Sbjct: 123 SMDLLG 128
>gi|299116535|emb|CBN74723.1| proteasome beta subunit [Ectocarpus siliculosus]
Length = 220
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 77/125 (61%), Gaps = 1/125 (0%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG + +AM GK C A+A DRR G++ Q ++T+ +R+ K++ +L G +GL TD T+
Sbjct: 20 ELNGGSCLAMAGKGCVALAVDRRFGLEGQLVSTEAKRVLKVNGQLLCGFTGLWTDVLTVM 79
Query: 65 QRLVFRHKLYQLRE-ERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTM 123
Q L L L E +R + P A L+S LLY +R P+F +P++AGL +P++C
Sbjct: 80 QDLSSEVALKSLAEADRPIAPAALAGLLSTLLYSRRGSPWFVEPIVAGLDPRGRPYLCGQ 139
Query: 124 DSIGA 128
D +GA
Sbjct: 140 DILGA 144
>gi|56752759|gb|AAW24591.1| SJCHGC02212 protein [Schistosoma japonicum]
Length = 179
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 75/128 (58%), Gaps = 27/128 (21%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI +NGSA++ M + + RL++G GLATD+
Sbjct: 1 MSILAHNGSAVIGM--------------------------SVYSLGPRLYVGFPGLATDN 34
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPF 119
QT++QRL FR +Y+LRE R +KP+T +++S LLYE+RFGPYF +PV+AG+ KP+
Sbjct: 35 QTVFQRLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPY 94
Query: 120 ICTMDSIG 127
+ MD IG
Sbjct: 95 VACMDLIG 102
>gi|440290998|gb|ELP84297.1| proteasome subunit beta type-3, putative [Entamoeba invadens IP1]
Length = 265
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 76/127 (59%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
SI Y+G + M GKNC A+A+D R G++ Q +++F ++ ++++ +G G+ D Q
Sbjct: 4 SIDNYSGGIAIGMCGKNCVALAADNRYGLRYQFASSNFHKVFQLNEHCLVGGCGVYADVQ 63
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
T+++++ + LY+LRE R + P + + LL+ KRF PY+ P+I G D K +
Sbjct: 64 TVFEQIKYDANLYKLREGRPIGPSQLVNATAHLLFSKRFNPYYMSPIIIGFDDNGKTYCS 123
Query: 122 TMDSIGA 128
+ D IGA
Sbjct: 124 SYDYIGA 130
>gi|429962770|gb|ELA42314.1| hypothetical protein VICG_00714 [Vittaforma corneae ATCC 50505]
Length = 205
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 87/151 (57%), Gaps = 5/151 (3%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
+ + G +++AM G C +I SD RLG T + F+R+ KI DR+ +GL D+Q
Sbjct: 4 VGSFYGGSILAMAGDGCVSIVSDYRLGNGPITTSKSFRRVFKITDRIVLGLPFFIPDAQY 63
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
L +++ L++L E RD++P+ A+L SA+LY R P + VIAG+ E+KP++C
Sbjct: 64 LLKKIEKHVSLFKLMEGRDIEPKECANLASAILYSHRRSPLYTTSVIAGIDSENKPYVCD 123
Query: 123 MDSIGAK-----YVGSLQKILLLLELLESLF 148
MDS+G K +V L+ L E+L+
Sbjct: 124 MDSLGCKTEPGNFVAEGTASTNLIGLCEALY 154
>gi|402467005|gb|EJW02389.1| hypothetical protein EDEG_03183 [Edhazardia aedis USNM 41457]
Length = 204
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 77/127 (60%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI+ + G +++A+ +N A +D RLG T + +F +I KI +LF+GL D+
Sbjct: 1 MSISTHYGGSVLAVKSRNSIAFLTDLRLGQGNFTTSMNFPKIHKITSKLFVGLPQFIPDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
Q L ++++ H L+ L E R M+PE ++VS +LY +RF P F PVIAG + +P++
Sbjct: 61 QFLLKKIIKNHNLFVLNENRPMEPEELTNMVSYILYSRRFTPLFTSPVIAGFNKFGEPYV 120
Query: 121 CTMDSIG 127
MD IG
Sbjct: 121 SGMDQIG 127
>gi|429964899|gb|ELA46897.1| hypothetical protein VCUG_01595 [Vavraia culicis 'floridensis']
Length = 205
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 81/125 (64%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
I+++ G +++A+ GK+ I SD+RLG T++ R+ K+ DR+++G++ D Q
Sbjct: 4 ISKFYGGSVLALTGKDSAIIVSDKRLGNNSITVSMQHDRVYKMSDRVYVGMALFVPDIQM 63
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
L ++L L+++ E R ++P+ F SL+S+ LY RF P + P++AG+ +++P+IC+
Sbjct: 64 LVRKLSKEVNLFEIGENRRIEPDEFCSLLSSTLYSNRFSPSYVDPIVAGIDVQNRPYICS 123
Query: 123 MDSIG 127
MD +G
Sbjct: 124 MDLLG 128
>gi|401825340|ref|XP_003886765.1| proteasome beta type-3 subunit [Encephalitozoon hellem ATCC 50504]
gi|392997921|gb|AFM97784.1| proteasome beta type-3 subunit [Encephalitozoon hellem ATCC 50504]
Length = 206
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 85/126 (67%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
I + G +++AM +N AI SDRRLG+ T++ +F RI KI RL++GL D+Q
Sbjct: 5 IETFYGGSVLAMASENAVAIMSDRRLGMGPITVSKEFTRIHKIGPRLYVGLPVFIPDTQV 64
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
L +++ + L++L E+R+M+PE +S++S LLY KR PY P++AGL+ + KP++ +
Sbjct: 65 LLKKIRKNYNLFRLEEQREMEPEELSSMISFLLYSKRTSPYITSPIVAGLTSDGKPYVSS 124
Query: 123 MDSIGA 128
MDSIG+
Sbjct: 125 MDSIGS 130
>gi|351723049|ref|NP_001237521.1| uncharacterized protein LOC100527027 [Glycine max]
gi|255631394|gb|ACU16064.1| unknown [Glycine max]
Length = 123
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/48 (95%), Positives = 46/48 (95%)
Query: 82 MKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAK 129
MKPETFASLVSALLYEKRFGPYFCQPVIAGL DEDKPFICTMD IGAK
Sbjct: 1 MKPETFASLVSALLYEKRFGPYFCQPVIAGLGDEDKPFICTMDCIGAK 48
>gi|396080880|gb|AFN82500.1| 20S proteasome subunit [Encephalitozoon romaleae SJ-2008]
Length = 206
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 94/151 (62%), Gaps = 5/151 (3%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
I + G +++AM +N AI SD+RLG+ T++ DF RI ++ RL++GLS D+Q
Sbjct: 5 IETFYGGSILAMASENAVAIMSDKRLGMGPITVSKDFVRIHRMGPRLYVGLSTFVPDTQV 64
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
L +R+ + L++L E+R+M+PE ++++S LLY KR PY P++AGLS + +P+I
Sbjct: 65 LLRRIRKNYNLFKLEEQREMEPEELSNMISFLLYSKRTSPYITAPIVAGLSSDGRPYISG 124
Query: 123 MDSIGA-----KYVGSLQKILLLLELLESLF 148
MD IG+ +V + L+ + E+L+
Sbjct: 125 MDCIGSITSPKDFVATGTAAKNLMGICEALY 155
>gi|195111614|ref|XP_002000373.1| GI22558 [Drosophila mojavensis]
gi|193916967|gb|EDW15834.1| GI22558 [Drosophila mojavensis]
Length = 203
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 77/122 (63%), Gaps = 2/122 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++AM GK+C AI++DRR + T +F++I + RL+IGL+GL TD T+ QR
Sbjct: 6 NG-CVIAMRGKDCVAISTDRRFCLPSYTAGEEFEKIFNLAPRLYIGLTGLQTDILTVQQR 64
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFICTMDS 125
LV R Y++ + P+ L+S +LYE RF P++ +P+IAG+ +P++ +MD
Sbjct: 65 LVHRRHAYEVNTGSLITPKILTELLSQMLYEHRFAPFYVEPIIAGMDPYTLEPYVSSMDL 124
Query: 126 IG 127
+G
Sbjct: 125 LG 126
>gi|349802615|gb|AEQ16780.1| putative proteasome beta 3 subunit [Pipa carvalhoi]
Length = 163
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GK+C AIA+DRR GVQ Q + TDFQ+I + DRL+IGL+GLA D
Sbjct: 1 MSIMSYNGGAVMAMRGKDCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLA-DV 59
Query: 61 QTLYQRLVFRHKLYQLR 77
QT+ QRL FR LY+L+
Sbjct: 60 QTVSQRLKFRLNLYELK 76
>gi|241614198|ref|XP_002406585.1| 20S proteasome, regulatory subunit beta, putative [Ixodes
scapularis]
gi|215500837|gb|EEC10331.1| 20S proteasome, regulatory subunit beta, putative [Ixodes
scapularis]
Length = 140
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 48 RLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQP 107
+L+ GLSGLATD QT+ QRL FR +Y+LRE R +KP+TF+S+VS +LYE+RFGPYF +
Sbjct: 4 KLYCGLSGLATDVQTVAQRLKFRINMYELREGRRIKPKTFSSVVSNILYERRFGPYFTEA 63
Query: 108 VIAGLSD-EDKPFICTMDSIG 127
+IAGL ++P+I + D IG
Sbjct: 64 LIAGLDPITNEPYIASTDLIG 84
>gi|269859513|ref|XP_002649481.1| 20S proteasome subunit [Enterocytozoon bieneusi H348]
gi|220067032|gb|EED44500.1| 20S proteasome subunit [Enterocytozoon bieneusi H348]
Length = 206
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 75/131 (57%), Gaps = 1/131 (0%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
I+ Y G +L+ M GKN I D+RLG+ T+ T+ I +I+ + FIGLSG D Q
Sbjct: 4 DISTYYGGSLLGMCGKNSVIIVGDKRLGMGNFTVNTERTSIHQINSKCFIGLSGFLPDCQ 63
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKR-FGPYFCQPVIAGLSDEDKPFI 120
L + KL++L E R ++ + +LVS +LY R GP + QP+I GL DKP+
Sbjct: 64 KLISIITNHIKLFELNENRIIEIDEVKNLVSYVLYSYRTTGPLYLQPIIVGLDRNDKPYA 123
Query: 121 CTMDSIGAKYV 131
+MD +G + +
Sbjct: 124 ISMDCLGCETI 134
>gi|303388305|ref|XP_003072387.1| 20S proteasome subunit [Encephalitozoon intestinalis ATCC 50506]
gi|303301527|gb|ADM11027.1| 20S proteasome subunit [Encephalitozoon intestinalis ATCC 50506]
Length = 206
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 79/126 (62%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
I + G +++A+ AI +D+RLG+ T++ DF RI KI RL++GL D+Q
Sbjct: 5 IETFYGGSILAIASDEAVAIMNDKRLGMSSITVSKDFTRIHKIGPRLYVGLPVFVPDTQV 64
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
L + + + L++L E+R+M+PE S++S LLY KR PY P++AGL + KP+I
Sbjct: 65 LLRSIRKNYNLFKLEEQREMEPEELTSMISFLLYSKREAPYITSPIVAGLRSDGKPYISG 124
Query: 123 MDSIGA 128
MDSIG+
Sbjct: 125 MDSIGS 130
>gi|395827082|ref|XP_003786737.1| PREDICTED: proteasome subunit beta type-3 [Otolemur garnettii]
Length = 133
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 72/124 (58%), Gaps = 9/124 (7%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDV 60
Query: 61 QTLYQRLVFRHKLY------QLREERDMKPET-FASLVSALLYEKRFGPYFCQPVIAGLS 113
QT+ Q R+ L LR D PE F ++ A+L VI +
Sbjct: 61 QTVGQNKPNRNILQAVGLKIHLRVGED--PEHLFETISQAMLNAVDRDAVSGMGVIVHII 118
Query: 114 DEDK 117
++DK
Sbjct: 119 EKDK 122
>gi|162605862|ref|XP_001713446.1| 26S proteasome SU [Guillardia theta]
gi|13794378|gb|AAK39755.1|AF083031_112 26S proteasome SU [Guillardia theta]
Length = 200
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 83/155 (53%), Gaps = 7/155 (4%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G +VA++GK+ IASD G Q+I K+H+ + IG+ GL D + L
Sbjct: 5 GGCVVAILGKDSLCIASDSENGSVSYLTEFKTQKIFKLHEDIIIGIVGLLGDIYGFKEIL 64
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+ + +E++ M+P SL+S LLY+KRF PY + ++AG ++ KPF+ T+D IG
Sbjct: 65 EYEISIVTKKEQKKMEPIEILSLISTLLYKKRFNPYLLEILVAGFTENGKPFLGTVDCIG 124
Query: 128 AKYVGSLQKILLLLELLESLFMVPVRQCSSLIWNP 162
A + + + L E++F P+ Q +W P
Sbjct: 125 A--ISYISNYACIGNLCENIF--PLIQ---FLWRP 152
>gi|397607048|gb|EJK59530.1| hypothetical protein THAOC_20230, partial [Thalassiosira
oceanica]
Length = 61
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 51/61 (83%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI EYNG+A++AM GK+C AIASD RLG+ QT+A DF+++ K++DRL +GL+GLATD
Sbjct: 1 MSILEYNGAAIIAMAGKDCVAIASDNRLGISYQTVAMDFKKVFKMNDRLMVGLAGLATDV 60
Query: 61 Q 61
Q
Sbjct: 61 Q 61
>gi|357616094|gb|EHJ70006.1| hypothetical protein KGM_20821 [Danaus plexippus]
Length = 437
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 56/70 (80%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
S+ YNG A+VAM G++C AIA+D+R G+Q QT++T+F ++ ++ LF+GL GLATD+Q
Sbjct: 357 SVETYNGGAVVAMKGQDCVAIATDKRYGIQAQTVSTNFPKVYQMGPTLFVGLPGLATDTQ 416
Query: 62 TLYQRLVFRH 71
T++QRL FR+
Sbjct: 417 TVFQRLKFRY 426
>gi|330039045|ref|XP_003239771.1| 26S proteasome SU [Cryptomonas paramecium]
gi|327206696|gb|AEA38873.1| 26S proteasome SU [Cryptomonas paramecium]
Length = 201
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 72/129 (55%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
Y G +VAM GK C A+A D R G + T RI KI+ ++ IG++GL D ++
Sbjct: 2 NYTGGCVVAMGGKKCIALACDLRFGNEYFTCGCATPRIFKINKKVIIGMTGLFGDISSVK 61
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
Q L ++ L+ + ++ +++S LLY+KRF P F + ++ GL +E +P I +MD
Sbjct: 62 QDLEYKMSLHSFEKNLSVQFFNICNILSNLLYQKRFCPLFLENIVCGLDEEFEPTITSMD 121
Query: 125 SIGAKYVGS 133
+G+ S
Sbjct: 122 ILGSSVFSS 130
>gi|361126076|gb|EHK98092.1| putative proteasome component PUP3 [Glarea lozoyensis 74030]
Length = 135
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query: 20 FAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREE 79
F+I D RLG+Q T++ +F +I D +++GL+GLATD T+ ++ +Y+LREE
Sbjct: 5 FSITCDLRLGLQALTVSNNFPKIFSYGD-VYLGLTGLATDVSTVSDLFRYKVNMYRLREE 63
Query: 80 RDMKPETFASLVSALLYEKRFGPYF 104
R++ P T A+LVS+ LYEKRFGPYF
Sbjct: 64 RNISPSTMANLVSSSLYEKRFGPYF 88
>gi|345318445|ref|XP_001517317.2| PREDICTED: proteasome subunit beta type-3-like [Ornithorhynchus
anatinus]
Length = 106
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 48/62 (77%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD QT +
Sbjct: 3 YNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTEPE 62
Query: 66 RL 67
L
Sbjct: 63 HL 64
>gi|225453909|ref|XP_002279266.1| PREDICTED: proteasome subunit beta type-1 [Vitis vinifera]
gi|296089152|emb|CBI38855.3| unnamed protein product [Vitis vinifera]
Length = 223
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 66/124 (53%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG + VA+ G + IA+D R+ + D+ +I K+ D+ + SG D + L
Sbjct: 12 DNNGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKICKLADKCVMASSGFQADVRALQ 71
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L RH +YQ + + M A L+S LY KRF PY+ V+ GL +E K + T D
Sbjct: 72 KHLAARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVFTYD 131
Query: 125 SIGA 128
++G+
Sbjct: 132 AVGS 135
>gi|116780814|gb|ABK21828.1| unknown [Picea sitchensis]
gi|116783100|gb|ABK22793.1| unknown [Picea sitchensis]
gi|224284319|gb|ACN39895.1| unknown [Picea sitchensis]
gi|224285431|gb|ACN40438.1| unknown [Picea sitchensis]
Length = 229
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 5/148 (3%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG +A+ G N IA+D R+ + D+ +I + D+ + SG D + L
Sbjct: 18 DNNGGTCIAIAGSNYCVIAADTRMSTGYSILTRDYSKICNLADKCVMASSGFQADVKALQ 77
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L RH +YQ + + M A L+S LY KRF PY+ V+ GL +E K + T D
Sbjct: 78 KNLSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVFTYD 137
Query: 125 SIGAKYVGSLQKILLLLELLESLFMVPV 152
+ VGS +++ + M+PV
Sbjct: 138 A-----VGSYERVGYGAQGTGGTLMMPV 160
>gi|79315846|ref|NP_001030905.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
gi|332646592|gb|AEE80113.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
Length = 223
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 66/124 (53%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG VA+ G + IA+D R+ ++ D+ +I K+ DR + SG D + L
Sbjct: 12 DNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQADVKALQ 71
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L RH +YQ + + M A L+S LY KRF PY+ V+ GL +E K + T D
Sbjct: 72 KVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEGKGCVFTYD 131
Query: 125 SIGA 128
++G+
Sbjct: 132 AVGS 135
>gi|2511568|emb|CAA73616.1| multicatalytic endopeptidase [Arabidopsis thaliana]
gi|3421107|gb|AAC32068.1| 20S proteasome beta subunit PBC1 [Arabidopsis thaliana]
Length = 70
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/42 (90%), Positives = 40/42 (95%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRI 42
MSI EYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDFQ +
Sbjct: 1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQNL 42
>gi|366984552|gb|AEX09185.1| proteasome subunit beta type 1 [Gossypium hirsutum]
Length = 223
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG + VA+ G + IA+D R+ + ++ +I K+ D+ + SG D + L
Sbjct: 12 DNNGGSCVAIAGADYCVIAADTRMSTGYNILTREYSKICKLADKCVMASSGFQADVRALQ 71
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
++L RH +YQ + + M A L+S LY KRF PY+ V+ GL +E K + T D
Sbjct: 72 KQLAARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVLTYD 131
Query: 125 SIGA 128
++G+
Sbjct: 132 AVGS 135
>gi|257205830|emb|CAX82566.1| 20S proteasome subunit beta 3 [Schistosoma japonicum]
Length = 98
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 48/64 (75%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI +NGSA++ M GK+C AIA D R GV LQTI+TDF ++ + RL++G GLATD+
Sbjct: 1 MSILAHNGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVYSLGPRLYVGFPGLATDN 60
Query: 61 QTLY 64
QT+Y
Sbjct: 61 QTVY 64
>gi|449432245|ref|XP_004133910.1| PREDICTED: proteasome subunit beta type-1-like [Cucumis sativus]
Length = 223
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 65/124 (52%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG + VA+ G + IA+D RL + D+ +I K+ D+ + SG D + L
Sbjct: 12 DNNGGSCVAIAGADYCVIAADTRLSTGYNILTRDYSKICKLADKAVLASSGFQADVKALQ 71
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L RH +YQ + + M A L+S LY KRF PY+ V+ GL E K + T D
Sbjct: 72 KALSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYD 131
Query: 125 SIGA 128
++G+
Sbjct: 132 AVGS 135
>gi|15232965|ref|NP_191641.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
gi|334186160|ref|NP_001190146.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
gi|297820934|ref|XP_002878350.1| hypothetical protein ARALYDRAFT_907612 [Arabidopsis lyrata subsp.
lyrata]
gi|12643281|sp|P42742.2|PSB1_ARATH RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S
proteasome beta subunit F-1; AltName: Full=Proteasome
component 5; AltName: Full=Proteasome subunit beta
type-6; AltName: Full=TAS-F22/FAFP98; AltName:
Full=TAS-G39.20
gi|577531|emb|CAA56201.1| proteasome subunit [Arabidopsis thaliana]
gi|3421120|gb|AAC32073.1| 20S proteasome beta subunit PBF1 [Arabidopsis thaliana]
gi|7329692|emb|CAB82686.1| proteasome component C5 [Arabidopsis thaliana]
gi|17065428|gb|AAL32868.1| proteasome component C5 [Arabidopsis thaliana]
gi|20148485|gb|AAM10133.1| proteasome component C5 [Arabidopsis thaliana]
gi|21554745|gb|AAM63678.1| proteasome component C5 [Arabidopsis thaliana]
gi|297324188|gb|EFH54609.1| hypothetical protein ARALYDRAFT_907612 [Arabidopsis lyrata subsp.
lyrata]
gi|332646591|gb|AEE80112.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
gi|332646593|gb|AEE80114.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
Length = 223
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 66/124 (53%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG VA+ G + IA+D R+ ++ D+ +I K+ DR + SG D + L
Sbjct: 12 DNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQADVKALQ 71
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L RH +YQ + + M A L+S LY KRF PY+ V+ GL +E K + T D
Sbjct: 72 KVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEGKGCVFTYD 131
Query: 125 SIGA 128
++G+
Sbjct: 132 AVGS 135
>gi|600387|emb|CAA47753.1| proteosome subunit [Arabidopsis thaliana]
Length = 230
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 66/124 (53%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG VA+ G + IA+D R+ ++ D+ +I K+ DR + SG D + L
Sbjct: 19 DNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQADVKALQ 78
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L RH +YQ + + M A L+S LY KRF PY+ V+ GL +E K + T D
Sbjct: 79 KVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEGKGCVFTYD 138
Query: 125 SIGA 128
++G+
Sbjct: 139 AVGS 142
>gi|168046657|ref|XP_001775789.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672796|gb|EDQ59328.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 229
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 10/163 (6%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG VA+ G + IA+D R+ + D+ +I +I ++ + SG D ++L
Sbjct: 18 DNNGGTCVAIAGADYCVIAADTRMSTGFSILTRDYSKIHQITEKCVLASSGFQADVRSLQ 77
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L RH++YQ + + M A L+S LY KRF PY+ V+ GL +E K + T D
Sbjct: 78 KNLDARHQIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDNEGKGCVYTYD 137
Query: 125 SIG----AKYVGSLQKILLLLELLE------SLFMVPVRQCSS 157
++G + Y L++ +L+ S ++P R+ S+
Sbjct: 138 AVGSYERSGYSSQGSGQTLIMPVLDNQLKSASPLVLPPRESST 180
>gi|168019760|ref|XP_001762412.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686490|gb|EDQ72879.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 237
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 66/124 (53%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG VA+ G + IA+D R+ + D+ +I I ++ + SG D ++L
Sbjct: 26 DNNGGTCVAIAGADYCVIAADTRMSTGFSILTRDYSKIHHITEKCVLASSGFQADVRSLQ 85
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L RH++YQ + + M A L+S LY KRF PY+ V+ GL +E K + T D
Sbjct: 86 KNLDARHQIYQHQHSKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYD 145
Query: 125 SIGA 128
++G+
Sbjct: 146 AVGS 149
>gi|414886159|tpg|DAA62173.1| TPA: hypothetical protein ZEAMMB73_205941 [Zea mays]
Length = 234
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 64/126 (50%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
+ E NG VA+ G + +A+D RL V + D +I + D+ + SG D +
Sbjct: 8 VYENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKA 67
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
L++ L R LYQ + + M A L+S LY KRF PY+ V+ GL E K + T
Sbjct: 68 LHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFT 127
Query: 123 MDSIGA 128
D++G+
Sbjct: 128 YDAVGS 133
>gi|351734454|ref|NP_001238324.1| uncharacterized protein LOC100306148 [Glycine max]
gi|255627685|gb|ACU14187.1| unknown [Glycine max]
Length = 223
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG + VA+ G + IA+D R+ + D+ +IS++ ++ + SG D + L
Sbjct: 12 DNNGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKISRLAEKCVMASSGFQADVKALQ 71
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L RH +YQ + + M A L+S LY KRF PY+ V+ GL +E K + T D
Sbjct: 72 KVLSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDNEGKGCVFTYD 131
Query: 125 SIGA 128
++G+
Sbjct: 132 AVGS 135
>gi|396478743|ref|XP_003840606.1| hypothetical protein LEMA_P102580.1 [Leptosphaeria maculans JN3]
gi|312217178|emb|CBX97127.1| hypothetical protein LEMA_P102580.1 [Leptosphaeria maculans JN3]
Length = 133
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 45/56 (80%), Gaps = 1/56 (1%)
Query: 73 LYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFICTMDSIG 127
+Y+LREER++ P+T A+LVS+ LYEKRFGPYF PVIAG++ KPFIC DSIG
Sbjct: 1 MYRLREERNISPQTMANLVSSSLYEKRFGPYFISPVIAGINQTSGKPFICGFDSIG 56
>gi|255640620|gb|ACU20595.1| unknown [Glycine max]
Length = 207
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG + VA+ G + IA+D R+ + D+ +IS++ ++ + SG D + L
Sbjct: 12 DNNGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKISQLAEKCVMASSGFQADVKALQ 71
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L RH +YQ + + M A L+S LY KRF PY+ V+ GL +E K + T D
Sbjct: 72 KVLSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDNEGKGCVFTYD 131
Query: 125 SIGA 128
++G+
Sbjct: 132 AVGS 135
>gi|356526807|ref|XP_003532008.1| PREDICTED: proteasome subunit beta type-1-like [Glycine max]
Length = 223
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG + VA+ G + IA+D R+ + D+ +IS++ ++ + SG D + L
Sbjct: 12 DNNGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKISQLAEKCVMASSGFQADVKALQ 71
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L RH +YQ + + M A L+S LY KRF PY+ V+ GL +E K + T D
Sbjct: 72 KVLSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDNEGKGCVFTYD 131
Query: 125 SIGA 128
++G+
Sbjct: 132 AVGS 135
>gi|242049776|ref|XP_002462632.1| hypothetical protein SORBIDRAFT_02g029260 [Sorghum bicolor]
gi|241926009|gb|EER99153.1| hypothetical protein SORBIDRAFT_02g029260 [Sorghum bicolor]
Length = 221
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 72/150 (48%), Gaps = 5/150 (3%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
+ E NG VA+ G + +A+D RL V + D +I + D+ + SG D +
Sbjct: 8 VYENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKA 67
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
L++ L R LYQ + + M A L+S LY KRF PY+ V+ GL E K + T
Sbjct: 68 LHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFT 127
Query: 123 MDSIGAKYVGSLQKILLLLELLESLFMVPV 152
D+ VGS ++ + S M+PV
Sbjct: 128 YDA-----VGSYERTGYSAQGTGSTLMMPV 152
>gi|115480019|ref|NP_001063603.1| Os09g0505600 [Oryza sativa Japonica Group]
gi|17380182|sp|O64464.1|PSB1_ORYSJ RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S
proteasome alpha subunit F; AltName: Full=20S proteasome
subunit beta-6
gi|3138799|dbj|BAA28276.1| beta 6 subunit of 20S proteasome [Oryza sativa Japonica Group]
gi|113631836|dbj|BAF25517.1| Os09g0505600 [Oryza sativa Japonica Group]
gi|125606253|gb|EAZ45289.1| hypothetical protein OsJ_29931 [Oryza sativa Japonica Group]
gi|215686333|dbj|BAG87594.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215736983|dbj|BAG95912.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 221
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 65/126 (51%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
+ E NG VA+ G + +A+D RL V + D +I ++ D+ + SG D +
Sbjct: 8 VYENNGGTCVAIAGADYCVVAADTRLSVGYNILTRDHSKICELADKCALASSGFQGDIKA 67
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
L++ L R LYQ + + M A L+S LY KRF PY+ V+ GL E K + T
Sbjct: 68 LHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFT 127
Query: 123 MDSIGA 128
D++G+
Sbjct: 128 YDAVGS 133
>gi|224033845|gb|ACN35998.1| unknown [Zea mays]
Length = 221
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 64/126 (50%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
+ E NG VA+ G + +A+D RL V + D +I + D+ + SG D +
Sbjct: 8 VYENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKA 67
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
L++ L R LYQ + + M A L+S LY KRF PY+ V+ GL E K + T
Sbjct: 68 LHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKECVFT 127
Query: 123 MDSIGA 128
D++G+
Sbjct: 128 YDAVGS 133
>gi|14594933|emb|CAC43327.1| putative beta6 proteasome subunit [Nicotiana tabacum]
Length = 192
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 64/124 (51%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG VA+ G + IA+D R+ + D+ +I K+ D+ + SG D + L
Sbjct: 4 DNNGGTCVAVAGADYCVIAADTRMSSGYNILTRDYSKIIKLADKCVLASSGFQADVKALQ 63
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L RH +YQ + + M L+S LY KRF PY+ V+ GL +E K + T D
Sbjct: 64 KVLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVFTYD 123
Query: 125 SIGA 128
++G+
Sbjct: 124 AVGS 127
>gi|414886158|tpg|DAA62172.1| TPA: proteasome subunit beta type [Zea mays]
Length = 221
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 64/126 (50%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
+ E NG VA+ G + +A+D RL V + D +I + D+ + SG D +
Sbjct: 8 VYENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKA 67
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
L++ L R LYQ + + M A L+S LY KRF PY+ V+ GL E K + T
Sbjct: 68 LHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFT 127
Query: 123 MDSIGA 128
D++G+
Sbjct: 128 YDAVGS 133
>gi|346467893|gb|AEO33791.1| hypothetical protein [Amblyomma maculatum]
Length = 221
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 65/124 (52%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG VA+ G + +A+D R+ V + D+ +I ++ D+ + SG D + L
Sbjct: 10 ENNGGTCVAIAGLDYCVVAADTRMSVGYSILTRDYSKICQLADKSILASSGFQGDIKALQ 69
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L +H +YQ + + M L+S LY KR PY+ V+AGL +E K + T D
Sbjct: 70 KNLAAKHLIYQHQHNKQMSCPAMGQLLSNTLYYKRXXPYYAFNVLAGLDNEGKGCVFTYD 129
Query: 125 SIGA 128
++G+
Sbjct: 130 AVGS 133
>gi|17380185|sp|O82531.1|PSB1_PETHY RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S
proteasome alpha subunit F; AltName: Full=20S proteasome
subunit beta-6
gi|3608485|gb|AAC35983.1| proteasome beta subunit [Petunia x hybrida]
Length = 223
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 63/124 (50%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG VA+ G + IA+D R+ + D+ +I K+ D+ + SG D + L
Sbjct: 12 DNNGGTCVAVAGADYCVIAADTRMSTGYNILTRDYSKIIKLADKCVMASSGFQADVRALQ 71
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L RH +YQ + + M L+S LY KRF PY+ V+ GL E K + T D
Sbjct: 72 KVLASRHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDSEGKGCVFTYD 131
Query: 125 SIGA 128
++G+
Sbjct: 132 AVGS 135
>gi|357454307|ref|XP_003597434.1| Proteasome subunit beta type [Medicago truncatula]
gi|355486482|gb|AES67685.1| Proteasome subunit beta type [Medicago truncatula]
Length = 231
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 64/124 (51%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG + VA+ G + IA+D R+ + D+ +IS + ++ + SG D + L
Sbjct: 20 DNNGGSCVAIAGSDYCVIAADTRMSTGYNILTRDYSKISHLAEKCVMASSGFQADVKALQ 79
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L RH YQ + + M A L+S LY KRF PY+ V+ GL E K + T D
Sbjct: 80 KVLSARHLTYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDSEGKGCVFTYD 139
Query: 125 SIGA 128
++G+
Sbjct: 140 AVGS 143
>gi|195611928|gb|ACG27794.1| proteasome subunit beta type 1 [Zea mays]
Length = 221
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 63/126 (50%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
+ E NG VA+ G + +A+D RL V + D +I + D+ + SG D +
Sbjct: 8 VYENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKA 67
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
L + L R LYQ + + M A L+S LY KRF PY+ V+ GL E K + T
Sbjct: 68 LQKNLAARELLYQXQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFT 127
Query: 123 MDSIGA 128
D++G+
Sbjct: 128 YDAVGS 133
>gi|388496148|gb|AFK36140.1| unknown [Medicago truncatula]
Length = 237
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 64/124 (51%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG + VA+ G + IA+D R+ + D+ +IS + ++ + SG D + L
Sbjct: 12 DNNGGSCVAIAGSDYCVIAADTRMSTGYNILTRDYSKISHLAEKCVMASSGFQADVKALQ 71
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L RH YQ + + M A L+S LY KRF PY+ V+ GL E K + T D
Sbjct: 72 KVLSARHLTYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDSEGKGCVFTYD 131
Query: 125 SIGA 128
++G+
Sbjct: 132 AVGS 135
>gi|168010847|ref|XP_001758115.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690571|gb|EDQ76937.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 51
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/51 (74%), Positives = 41/51 (80%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGL 53
IT YNGSAL+AMV KNC AIASDRRLGV QTIA DF RI KI+D L+I L
Sbjct: 1 ITSYNGSALIAMVEKNCLAIASDRRLGVNFQTIACDFLRIFKIYDNLYISL 51
>gi|118488258|gb|ABK95948.1| unknown [Populus trichocarpa]
Length = 223
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 65/124 (52%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
++NG VA+ G + +A+D R+ + D+ +I K+ D+ + SG D + L
Sbjct: 12 DFNGGTCVAIAGADYCVVAADTRMSTGYNILTRDYSKICKLADKCLMASSGFQADVKALQ 71
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L +H +YQ + + M A L+S LY KRF PY+ V+ G +E K + T D
Sbjct: 72 KVLGAKHLIYQHQHNKQMSCPAMARLLSNTLYYKRFFPYYTFNVLVGFDEEGKGCVYTYD 131
Query: 125 SIGA 128
++G+
Sbjct: 132 AVGS 135
>gi|357492211|ref|XP_003616394.1| Proteasome subunit beta type [Medicago truncatula]
gi|355517729|gb|AES99352.1| Proteasome subunit beta type [Medicago truncatula]
Length = 223
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 64/124 (51%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG + VA+ G + IA+D R+ + D+ +IS + ++ + SG D + L
Sbjct: 12 DNNGGSCVAIAGSDYCVIAADTRMSTGYNILTRDYSKISHLAEKCVMASSGFQADVKALQ 71
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L RH YQ + + M A L+S LY KRF PY+ V+ GL E K + T D
Sbjct: 72 KVLSARHLTYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDSEGKGCVFTYD 131
Query: 125 SIGA 128
++G+
Sbjct: 132 AVGS 135
>gi|224130004|ref|XP_002320726.1| predicted protein [Populus trichocarpa]
gi|222861499|gb|EEE99041.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 65/124 (52%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
++NG VA+ G + +A+D R+ + D+ +I K+ D+ + SG D + L
Sbjct: 12 DFNGGTCVAIAGADYCVVAADTRMSTGYNILTRDYSKICKLADKCLMASSGFQADVKALQ 71
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L +H +YQ + + M A L+S LY KRF PY+ V+ G +E K + T D
Sbjct: 72 KVLGAKHLIYQHQHNKQMSCPAMARLLSNTLYYKRFFPYYTFNVLVGFDEEGKGCVYTYD 131
Query: 125 SIGA 128
++G+
Sbjct: 132 AVGS 135
>gi|19115641|ref|NP_594729.1| 20S proteasome component beta 6 [Schizosaccharomyces pombe 972h-]
gi|17380232|sp|Q9UQY2.1|PSB6_SCHPO RecName: Full=Probable proteasome subunit beta type-6
gi|5734483|emb|CAB52716.1| 20S proteasome component beta 6 [Schizosaccharomyces pombe]
gi|6681370|dbj|BAA88692.1| catalytic subunit (C5) of proteasome [Schizosaccharomyces pombe]
Length = 225
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQ 65
NG VA+ G +A D R V I T FQ R+ ++ D L IG SG D+ L +
Sbjct: 12 NGGTTVAIAGDGFAILAGDTR-SVNGYNINTRFQPRVHEVGDDLVIGASGFEADALALVK 70
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
R+ R LY ER M ++ A +V LLY KRF PY+ +AG+ E K I + D
Sbjct: 71 RIQQRIDLYHDNHERKMSAQSCACMVRTLLYGKRFFPYYVYTTVAGIDKEGKGEIYSFDP 130
Query: 126 IGA 128
+G+
Sbjct: 131 VGS 133
>gi|226531171|ref|NP_001152701.1| proteasome subunit beta type 1 [Zea mays]
gi|194701432|gb|ACF84800.1| unknown [Zea mays]
gi|195605546|gb|ACG24603.1| proteasome subunit beta type 1 [Zea mays]
gi|195659171|gb|ACG49053.1| proteasome subunit beta type 1 [Zea mays]
gi|223974469|gb|ACN31422.1| unknown [Zea mays]
gi|414589908|tpg|DAA40479.1| TPA: proteasome subunit beta type [Zea mays]
Length = 221
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 63/126 (50%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
+ E NG VA+ G + +A+D RL V + D +I + D+ + SG D +
Sbjct: 8 VYENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKA 67
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
L + L R LYQ + + M A L+S LY KRF PY+ V+ GL E K + T
Sbjct: 68 LQKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFT 127
Query: 123 MDSIGA 128
D++G+
Sbjct: 128 YDAVGS 133
>gi|224067752|ref|XP_002302536.1| predicted protein [Populus trichocarpa]
gi|118484887|gb|ABK94310.1| unknown [Populus trichocarpa]
gi|222844262|gb|EEE81809.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 65/124 (52%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
++NG VA+ G + +A+D R+ + D+ +I K+ D+ + SG D + L
Sbjct: 12 DFNGGTCVAIAGADYCVVAADTRMSTGYNILTRDYSKIYKLADKCLMASSGFQADVRALQ 71
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L +H +YQ + + M A L+S LY KRF PY+ V+ G +E K + T D
Sbjct: 72 KVLGAKHLIYQHQHNKQMSCPAMARLLSNTLYYKRFFPYYTFNVLVGFDEEGKGCVYTYD 131
Query: 125 SIGA 128
++G+
Sbjct: 132 AVGS 135
>gi|388505884|gb|AFK41008.1| unknown [Lotus japonicus]
Length = 223
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 66/124 (53%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG + VA+ G + IA+D R+ + ++ +IS++ ++ + SG D + L
Sbjct: 12 DNNGGSCVAIAGADYCVIAADTRMSTGYNILTREYSKISQLAEKSVMASSGFQADVKALQ 71
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L RH +YQ + + M A L+S LY KRF PY+ V+ GL E K + T D
Sbjct: 72 KVLSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDSEGKGCVFTYD 131
Query: 125 SIGA 128
++G+
Sbjct: 132 AVGS 135
>gi|149731672|ref|XP_001503282.1| PREDICTED: proteasome subunit beta type-3-like [Equus caballus]
Length = 168
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
Query: 35 IATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSAL 94
+ TD Q+I + + L I L+GLAT+ QT Q L F+ L +L E +KP T S+++ L
Sbjct: 2 LTTDLQKIFPMGEWLDISLTGLATNFQTTAQHLKFQLNLCELNEGSQIKPYTLMSVMANL 61
Query: 95 LYEKRFGPYFCQPVIAGLSDED-KPFICTMDSIGAKYV 131
LY+K+FGP + +PVIA L + PF+C++D I V
Sbjct: 62 LYKKQFGPCYTEPVIAWLDLKTFTPFLCSLDLISCPVV 99
>gi|145350076|ref|XP_001419449.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579680|gb|ABO97742.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 227
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 70/124 (56%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG ++A+ G+N ASD R+ + +++++ ++ + + +G D+QTL
Sbjct: 16 DNNGGTVLAVAGENYVICASDTRMSTGYSILTRNYEKVDQMSPKTLMASAGFMADAQTLK 75
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L R K Y+ + ++ + +FA ++S LY +RF PY+ ++AGL E K + T D
Sbjct: 76 KTLKARCKQYEFQNKKPIGCVSFAQMLSNTLYYRRFFPYYAFNIVAGLDAEGKGAVFTYD 135
Query: 125 SIGA 128
++G+
Sbjct: 136 AVGS 139
>gi|156084624|ref|XP_001609795.1| proteasome A-type and B-type family protein [Babesia bovis]
gi|154797047|gb|EDO06227.1| proteasome A-type and B-type family protein [Babesia bovis]
Length = 217
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VA V NC IA+D RL + + ++ K+ IG SG+ D L+
Sbjct: 13 NGGTVVAAVWNNCAVIAADTRLSIGYAIHTRNVSKLKKLTQTCVIGTSGMQADMHALHSA 72
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L + +LY+ + R+ A L+S +LY +RF PY+ ++ G+ + + C D+I
Sbjct: 73 LERQIELYRFKHHREPGISVIAQLLSTILYSRRFFPYYTFNILCGVDENGRGITCGFDAI 132
Query: 127 G 127
G
Sbjct: 133 G 133
>gi|339243107|ref|XP_003377479.1| proteasome subunit beta type-3 [Trichinella spiralis]
gi|316973717|gb|EFV57276.1| proteasome subunit beta type-3 [Trichinella spiralis]
Length = 139
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-DEDKPFICTMDS 125
+++R +Y LRE RD+ PE F+ ++S LLYE RF PYFC+PV+AG+ +P++ MD
Sbjct: 1 MLYRTSIYNLRENRDVTPEVFSQMLSNLLYENRFSPYFCEPVVAGIDWKTSEPYVANMDL 60
Query: 126 IG 127
IG
Sbjct: 61 IG 62
>gi|238585089|ref|XP_002390764.1| hypothetical protein MPER_09910 [Moniliophthora perniciosa FA553]
gi|215454558|gb|EEB91694.1| hypothetical protein MPER_09910 [Moniliophthora perniciosa FA553]
Length = 145
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 50/68 (73%), Gaps = 6/68 (8%)
Query: 66 RLVFRHK--LYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED----KPF 119
R +FR++ +Y ++EER+++PETFA LVS+ LYE+RFGP+F +PV+AG+S KPF
Sbjct: 1 RKLFRYRVNMYTIKEEREIEPETFAHLVSSTLYERRFGPFFIEPVMAGMSKTPSGGLKPF 60
Query: 120 ICTMDSIG 127
I D IG
Sbjct: 61 IAATDLIG 68
>gi|344235158|gb|EGV91261.1| Proteasome subunit beta type-3 [Cricetulus griseus]
Length = 52
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/52 (63%), Positives = 42/52 (80%)
Query: 12 VAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTL 63
+AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD QT+
Sbjct: 1 MAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTV 52
>gi|115477445|ref|NP_001062318.1| Os08g0529100 [Oryza sativa Japonica Group]
gi|42407968|dbj|BAD09106.1| putative proteasome subunit beta type 1 [Oryza sativa Japonica
Group]
gi|113624287|dbj|BAF24232.1| Os08g0529100 [Oryza sativa Japonica Group]
gi|215678609|dbj|BAG92264.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640910|gb|EEE69042.1| hypothetical protein OsJ_28037 [Oryza sativa Japonica Group]
Length = 219
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 4/153 (2%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
+ E NG VA+ G + +A+D RL V ++ D +I+ + D+ + SG D +
Sbjct: 6 VYENNGGTCVAVAGADYCVVAADTRLSVGYSILSRDSSKIAHLADKCVLASSGFQGDVKA 65
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
L + L + LY+ + M A L+S LY KRF PY+ V+ GL E K + T
Sbjct: 66 LQRNLTAKELLYEHNHNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFT 125
Query: 123 MDSIGA----KYVGSLQKILLLLELLESLFMVP 151
D++G+ Y L++ +L++ P
Sbjct: 126 YDAVGSYERTGYSAQGTGAALMMPVLDNQLKSP 158
>gi|348561415|ref|XP_003466508.1| PREDICTED: proteasome subunit beta type-1-like [Cavia porcellus]
Length = 241
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ DR IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDRTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGA 128
+G+
Sbjct: 155 VGS 157
>gi|255541320|ref|XP_002511724.1| proteasome subunit beta type, putative [Ricinus communis]
gi|223548904|gb|EEF50393.1| proteasome subunit beta type, putative [Ricinus communis]
Length = 223
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 64/124 (51%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG + VA+ G + IA+D R+ + D+ +I ++ ++ + SG D Q L
Sbjct: 12 DNNGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKICQLAEKSVMASSGFQADVQALQ 71
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L +H +YQ + + M L+S LY KRF PY+ V+ GL E K + T D
Sbjct: 72 KHLKAKHLIYQHQHNKQMSCPAMGQLLSNTLYFKRFFPYYAFNVLGGLDSEGKGCVYTYD 131
Query: 125 SIGA 128
++G+
Sbjct: 132 AVGS 135
>gi|242082111|ref|XP_002445824.1| hypothetical protein SORBIDRAFT_07g026360 [Sorghum bicolor]
gi|241942174|gb|EES15319.1| hypothetical protein SORBIDRAFT_07g026360 [Sorghum bicolor]
Length = 219
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 5/148 (3%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG VA+ G + +A+D RL V ++ D +I+++ D+ + SG D + L
Sbjct: 8 ENNGGTCVAVAGADYCVVAADTRLSVGYSILSRDHSKIAQLADKCVLASSGFQGDIKALQ 67
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L + +Y+ + M A L+S LY KRF PY+ V+AGL + K + T D
Sbjct: 68 KALTAKELIYEHNNNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLAGLDTQGKGCVFTYD 127
Query: 125 SIGAKYVGSLQKILLLLELLESLFMVPV 152
+ VGS ++ + S M+PV
Sbjct: 128 A-----VGSYERTGYSAQGTGSALMMPV 150
>gi|291414594|ref|XP_002723544.1| PREDICTED: proteasome beta 1 subunit [Oryctolagus cuniculus]
Length = 241
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ DR IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDRTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGA 128
+G+
Sbjct: 155 VGS 157
>gi|255076203|ref|XP_002501776.1| predicted protein [Micromonas sp. RCC299]
gi|226517040|gb|ACO63034.1| predicted protein [Micromonas sp. RCC299]
Length = 229
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 69/124 (55%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG ++A+ G++ A+D R+ + D+++I ++ D+ + +G D+ TL
Sbjct: 18 DNNGGTVLAVAGEDYVVCAADTRMSTGYNILTRDYKKIDQMSDKCVLASAGFMADAVTLK 77
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L R Y+ + ++ M +FA ++S LY +RF PY+ ++AGL E K + T D
Sbjct: 78 KTLKARCTTYEFQNDKPMGCVSFAQMLSNTLYYRRFFPYYTFNIVAGLDAEGKGAVFTYD 137
Query: 125 SIGA 128
++G+
Sbjct: 138 AVGS 141
>gi|417397679|gb|JAA45873.1| Putative 20s proteasome regulatory subunit beta type psmb1/pre7
[Desmodus rotundus]
Length = 240
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 66/123 (53%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D+ IG SG D TL +
Sbjct: 34 FNGGTILAIAGEDFSIVASDTRLSEGFSIHSRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 93
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 94 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 153
Query: 126 IGA 128
+G+
Sbjct: 154 VGS 156
>gi|218201500|gb|EEC83927.1| hypothetical protein OsI_30000 [Oryza sativa Indica Group]
Length = 219
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 4/151 (2%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG VA+ G + +A+D RL V ++ D +I+ + D+ + SG D + L
Sbjct: 8 ENNGGTCVAVAGADYCVVAADTRLSVGYSILSRDSSKIAHLADKCVLASSGFQGDVKALQ 67
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L + LY+ + M A L+S LY KRF PY+ V+ GL E K + T D
Sbjct: 68 RNLAAKELLYEHNHNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYD 127
Query: 125 SIGA----KYVGSLQKILLLLELLESLFMVP 151
++G+ Y L++ +L++ P
Sbjct: 128 AVGSYERTGYSAQGTGAALMMPVLDNQLKSP 158
>gi|308807300|ref|XP_003080961.1| PSB1_PETHY Proteasome subunit beta type 1 (ISS) [Ostreococcus
tauri]
gi|116059422|emb|CAL55129.1| PSB1_PETHY Proteasome subunit beta type 1 (ISS) [Ostreococcus
tauri]
Length = 233
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 68/124 (54%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG ++A+ G++ A D R+ + F++I K+ + + +G A D+ TL
Sbjct: 22 DNNGGTVLAVAGESYVICAGDTRMSSGYNILTRKFEKIDKMSGKTLMASAGFAADAVTLK 81
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L R K Y+ + +R++ FA ++S LY +RF PY+ ++AGL E K + T D
Sbjct: 82 KTLKARCKQYEFQNKREIGCVAFAQMLSNTLYYRRFFPYYAFNIVAGLDAEGKGAVFTYD 141
Query: 125 SIGA 128
++G+
Sbjct: 142 AVGS 145
>gi|62087736|dbj|BAD92315.1| proteasome beta 1 subunit variant [Homo sapiens]
Length = 196
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 40 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 99
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 100 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 159
Query: 126 IGA 128
+G+
Sbjct: 160 VGS 162
>gi|296088721|emb|CBI38171.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
S+ NG + VA+ G + I S R+ + + D+ +I K+ D+ + SG D +
Sbjct: 97 SLYNNNGGSCVAIAGADYCVITSGTRMSIGYNILTCDYSKICKLADKCVMASSGFQADVR 156
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
L + L R +YQ + + M A L+S LY KRF PY+ V+ GL +E K ++
Sbjct: 157 ALQKHLAARQLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGWV 215
>gi|21465654|pdb|1IRU|M Chain M, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
gi|21465668|pdb|1IRU|1 Chain 1, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
Length = 213
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 7 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 66
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 67 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 126
Query: 126 IGA 128
+G+
Sbjct: 127 VGS 129
>gi|12653473|gb|AAH00508.1| Proteasome (prosome, macropain) subunit, beta type, 1 [Homo
sapiens]
gi|157928354|gb|ABW03473.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
construct]
gi|157928990|gb|ABW03780.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
construct]
Length = 241
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGA 128
+G+
Sbjct: 155 VGS 157
>gi|332264007|ref|XP_003281040.1| PREDICTED: proteasome subunit beta type-1 [Nomascus leucogenys]
Length = 241
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFAIVASDTRLSEGFSVHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGA 128
+G+
Sbjct: 155 VGS 157
>gi|4506193|ref|NP_002784.1| proteasome subunit beta type-1 [Homo sapiens]
gi|114610308|ref|XP_001140101.1| PREDICTED: proteasome subunit beta type-1 isoform 4 [Pan
troglodytes]
gi|332825501|ref|XP_003311646.1| PREDICTED: proteasome subunit beta type-1 [Pan troglodytes]
gi|397502108|ref|XP_003821710.1| PREDICTED: proteasome subunit beta type-1 isoform 1 [Pan paniscus]
gi|397502110|ref|XP_003821711.1| PREDICTED: proteasome subunit beta type-1 isoform 2 [Pan paniscus]
gi|397502112|ref|XP_003821712.1| PREDICTED: proteasome subunit beta type-1 isoform 3 [Pan paniscus]
gi|130853|sp|P20618.2|PSB1_HUMAN RecName: Full=Proteasome subunit beta type-1; AltName:
Full=Macropain subunit C5; AltName: Full=Multicatalytic
endopeptidase complex subunit C5; AltName:
Full=Proteasome component C5; AltName: Full=Proteasome
gamma chain; Flags: Precursor
gi|220026|dbj|BAA00658.1| proteasome subunit C5 [Homo sapiens]
gi|18088777|gb|AAH20807.1| Proteasome (prosome, macropain) subunit, beta type, 1 [Homo
sapiens]
gi|54696306|gb|AAV38525.1| proteasome (prosome, macropain) subunit, beta type, 1 [Homo
sapiens]
gi|61357229|gb|AAX41355.1| proteasome subunit beta type 1 [synthetic construct]
gi|197692325|dbj|BAG70126.1| proteasome beta 1 subunit [Homo sapiens]
gi|197692585|dbj|BAG70256.1| proteasome beta 1 subunit [Homo sapiens]
gi|261860708|dbj|BAI46876.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
construct]
gi|410210668|gb|JAA02553.1| proteasome (prosome, macropain) subunit, beta type, 1 [Pan
troglodytes]
gi|410259166|gb|JAA17549.1| proteasome (prosome, macropain) subunit, beta type, 1 [Pan
troglodytes]
gi|410301642|gb|JAA29421.1| proteasome (prosome, macropain) subunit, beta type, 1 [Pan
troglodytes]
gi|410335833|gb|JAA36863.1| proteasome (prosome, macropain) subunit, beta type, 1 [Pan
troglodytes]
Length = 241
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGA 128
+G+
Sbjct: 155 VGS 157
>gi|226533094|ref|NP_001147213.1| proteasome subunit beta type 1 [Zea mays]
gi|195608582|gb|ACG26121.1| proteasome subunit beta type 1 [Zea mays]
Length = 219
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 5/148 (3%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG +A+ G + +A+D RL + ++ D +IS++ D+ + SG D + L
Sbjct: 8 ENNGGTCLAVAGADYCVVAADTRLSIGYSILSRDHSKISQLSDKCVLASSGFQGDIKALQ 67
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L + +Y+ + M A L+S LY KRF PY+ V+AGL + K + T D
Sbjct: 68 KALAAKELIYEHNNNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLAGLDTQGKGCVFTYD 127
Query: 125 SIGAKYVGSLQKILLLLELLESLFMVPV 152
+ VGS ++ + S M+PV
Sbjct: 128 A-----VGSYERTGYSAQGTGSALMMPV 150
>gi|54696302|gb|AAV38523.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
construct]
gi|54696304|gb|AAV38524.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
construct]
gi|61367228|gb|AAX42969.1| proteasome subunit beta type 1 [synthetic construct]
gi|61367236|gb|AAX42970.1| proteasome subunit beta type 1 [synthetic construct]
Length = 242
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGA 128
+G+
Sbjct: 155 VGS 157
>gi|301779700|ref|XP_002925260.1| PREDICTED: proteasome subunit beta type-1-like [Ailuropoda
melanoleuca]
gi|281351745|gb|EFB27329.1| hypothetical protein PANDA_014727 [Ailuropoda melanoleuca]
Length = 241
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFSIVASDTRLSEGYSVHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGA 128
+G+
Sbjct: 155 VGS 157
>gi|303278464|ref|XP_003058525.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459685|gb|EEH56980.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 220
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 69/124 (55%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG ++A+ G++ A+D R+ + D+++I K+ ++ + +G D+ TL
Sbjct: 9 DNNGGTVLAVAGEDYVVCAADTRMSTGYSVLTRDYKKIEKMTEKCVMASAGFMADAVTLK 68
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L R Y+ + ++M +FA ++S LY +RF PY+ ++AGL E K + T D
Sbjct: 69 KTLKARCVSYEFQNNKEMGCVSFAQMLSNTLYYRRFFPYYTFNIVAGLDKEGKGAVFTYD 128
Query: 125 SIGA 128
++G+
Sbjct: 129 AVGS 132
>gi|414869634|tpg|DAA48191.1| TPA: proteasome subunit beta type [Zea mays]
Length = 219
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 5/148 (3%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG +A+ G + +A+D RL + ++ D +IS++ D+ + SG D + L
Sbjct: 8 ENNGGTCLAVAGADYCVVAADTRLSIGYSILSRDHSKISQLSDKCVLASSGFQGDIKALQ 67
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L + +Y+ + M A L+S LY KRF PY+ V+AGL + K + T D
Sbjct: 68 KALAAKELIYEHNNNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLAGLDTQGKGCVFTYD 127
Query: 125 SIGAKYVGSLQKILLLLELLESLFMVPV 152
+ VGS ++ + S M+PV
Sbjct: 128 A-----VGSYERTGYSAQGTGSALMMPV 150
>gi|340374856|ref|XP_003385953.1| PREDICTED: proteasome subunit beta type-1-B-like [Amphimedon
queenslandica]
Length = 223
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 68/123 (55%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ IASD RL Q + DF + ++ D + +G G D TL +
Sbjct: 17 WNGGTVLAVSGEDFSVIASDTRLSEGFQIYSRDFPKTYQLGDNVVLGSCGFQGDVTTLNK 76
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ + K+Y ++ M E+ A L+S +LY +RF PY+ ++AGL + K + + D
Sbjct: 77 VIEAQLKIYDHIYQKKMSCESLAQLLSTILYTRRFFPYYTYNILAGLDSKGKGCVFSFDP 136
Query: 126 IGA 128
IG+
Sbjct: 137 IGS 139
>gi|84370111|ref|NP_001033628.1| proteasome subunit beta type-1 precursor [Bos taurus]
gi|108860905|sp|Q2TBX6.1|PSB1_BOVIN RecName: Full=Proteasome subunit beta type-1; Flags: Precursor
gi|83638719|gb|AAI09495.1| Proteasome (prosome, macropain) subunit, beta type, 1 [Bos taurus]
Length = 241
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGA 128
+G+
Sbjct: 155 VGS 157
>gi|432114954|gb|ELK36597.1| Proteasome subunit beta type-1 [Myotis davidii]
Length = 240
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 34 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 93
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 94 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 153
Query: 126 IGA 128
+G+
Sbjct: 154 VGS 156
>gi|386781057|ref|NP_001247565.1| proteasome subunit beta type-1 [Macaca mulatta]
gi|355562210|gb|EHH18842.1| hypothetical protein EGK_15528 [Macaca mulatta]
gi|355749047|gb|EHH53530.1| hypothetical protein EGM_14190 [Macaca fascicularis]
gi|380788877|gb|AFE66314.1| proteasome subunit beta type-1 [Macaca mulatta]
Length = 241
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGA 128
+G+
Sbjct: 155 VGS 157
>gi|296483812|tpg|DAA25927.1| TPA: proteasome beta 1 subunit precursor [Bos taurus]
Length = 241
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGA 128
+G+
Sbjct: 155 VGS 157
>gi|226372486|gb|ACO51868.1| Proteasome subunit beta type-1-A [Rana catesbeiana]
Length = 240
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 66/123 (53%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + + + K+ D+ IG SG D TL +
Sbjct: 34 FNGGTVLALAGEDFALVASDTRLSEDYSIHSRNTPKCYKLTDKTVIGCSGFHGDCLTLTK 93
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 94 IIEARLKMYKHSNNKTMTSNAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 153
Query: 126 IGA 128
+G+
Sbjct: 154 VGS 156
>gi|426235057|ref|XP_004011507.1| PREDICTED: proteasome subunit beta type-1 [Ovis aries]
Length = 241
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGA 128
+G+
Sbjct: 155 VGS 157
>gi|384944338|gb|AFI35774.1| proteasome subunit beta type-1 precursor [Macaca mulatta]
Length = 241
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGA 128
+G+
Sbjct: 155 VGS 157
>gi|402868791|ref|XP_003898471.1| PREDICTED: proteasome subunit beta type-1 [Papio anubis]
Length = 241
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGA 128
+G+
Sbjct: 155 VGS 157
>gi|378792314|pdb|3UNB|L Chain L, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792328|pdb|3UNB|Z Chain Z, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792342|pdb|3UNB|NN Chain n, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792356|pdb|3UNB|2 Chain 2, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792370|pdb|3UNE|L Chain L, Mouse Constitutive 20s Proteasome
gi|378792384|pdb|3UNE|Z Chain Z, Mouse Constitutive 20s Proteasome
gi|378792398|pdb|3UNE|NN Chain n, Mouse Constitutive 20s Proteasome
gi|378792412|pdb|3UNE|2 Chain 2, Mouse Constitutive 20s Proteasome
gi|378792426|pdb|3UNF|L Chain L, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792440|pdb|3UNF|Z Chain Z, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792454|pdb|3UNH|L Chain L, Mouse 20s Immunoproteasome
gi|378792468|pdb|3UNH|Z Chain Z, Mouse 20s Immunoproteasome
Length = 213
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 7 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 66
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 67 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 126
Query: 126 IGA 128
+G+
Sbjct: 127 VGS 129
>gi|297678538|ref|XP_002817127.1| PREDICTED: proteasome subunit beta type-1-like [Pongo abelii]
gi|297679681|ref|XP_002817653.1| PREDICTED: proteasome subunit beta type-1 isoform 1 [Pongo abelii]
Length = 241
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGA 128
+G+
Sbjct: 155 VGS 157
>gi|442749997|gb|JAA67158.1| Putative 20s proteasome regulatory subunit beta type psmb1/pre7
[Ixodes ricinus]
Length = 232
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 69/144 (47%), Gaps = 4/144 (2%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++VA+ G++ IASD RL D ++ K+ D+ +G G D T +
Sbjct: 27 NGGSIVAIAGEDFVVIASDSRLSAGYHIYTRDQSKLFKLSDKCILGSGGCWCDILTFTRF 86
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R K+Y + M A L+ +LY KRF PY+ ++AGL +E K I + D +
Sbjct: 87 LEARMKMYLHEHHKPMSTPAVAQLIVTMLYHKRFFPYYISNILAGLDEEGKGCIYSYDPV 146
Query: 127 G----AKYVGSLQKILLLLELLES 146
G +Y LL LL+S
Sbjct: 147 GHCERVQYRSGGSGSALLQPLLDS 170
>gi|1165123|emb|CAA56702.1| component C5 of proteasome [Mus musculus]
Length = 225
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 19 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 78
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 79 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 138
Query: 126 IGA 128
+G+
Sbjct: 139 VGS 141
>gi|403305890|ref|XP_003943482.1| PREDICTED: proteasome subunit beta type-1 [Saimiri boliviensis
boliviensis]
Length = 241
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGA 128
+G+
Sbjct: 155 VGS 157
>gi|296199648|ref|XP_002747247.1| PREDICTED: proteasome subunit beta type-1-like [Callithrix jacchus]
Length = 241
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGA 128
+G+
Sbjct: 155 VGS 157
>gi|7242197|ref|NP_035315.1| proteasome subunit beta type-1 precursor [Mus musculus]
gi|2499837|sp|O09061.1|PSB1_MOUSE RecName: Full=Proteasome subunit beta type-1; AltName:
Full=Macropain subunit C5; AltName: Full=Multicatalytic
endopeptidase complex subunit C5; AltName:
Full=Proteasome component C5; AltName: Full=Proteasome
gamma chain; Flags: Precursor
gi|1165122|emb|CAA56701.1| component C5 of proteasome [Mus musculus]
gi|1698584|gb|AAB37251.1| proteasome beta-subunit C5 [Mus musculus]
gi|17390820|gb|AAH18351.1| Proteasome (prosome, macropain) subunit, beta type 1 [Mus musculus]
gi|26346380|dbj|BAC36841.1| unnamed protein product [Mus musculus]
gi|39754751|gb|AAR30867.1| proteasome beta-subunit C5 [Mus musculus]
gi|74198429|dbj|BAE39698.1| unnamed protein product [Mus musculus]
gi|74205097|dbj|BAE21005.1| unnamed protein product [Mus musculus]
gi|148688516|gb|EDL20463.1| proteasome (prosome, macropain) subunit, beta type 1 [Mus musculus]
Length = 240
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 34 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 93
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 94 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 153
Query: 126 IGA 128
+G+
Sbjct: 154 VGS 156
>gi|354486298|ref|XP_003505318.1| PREDICTED: proteasome subunit beta type-1-like [Cricetulus griseus]
Length = 240
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 34 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 93
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 94 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 153
Query: 126 IGA 128
+G+
Sbjct: 154 VGS 156
>gi|440894478|gb|ELR46920.1| Proteasome subunit beta type-1, partial [Bos grunniens mutus]
Length = 241
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAVAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGA 128
+G+
Sbjct: 155 VGS 157
>gi|357159246|ref|XP_003578386.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1-like
[Brachypodium distachyon]
Length = 221
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 63/126 (50%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
+ E NG VA+ G + +A+D RL V + D +I ++ + I SG D +
Sbjct: 8 VYENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICELXRKCVIASSGFQGDIKA 67
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
L + L R LYQ + + M A L+S LY KRF PY+ V+ GL E K + +
Sbjct: 68 LQKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVYS 127
Query: 123 MDSIGA 128
D++G+
Sbjct: 128 YDAVGS 133
>gi|346986249|ref|NP_001231282.1| proteasome subunit beta type-1 [Sus scrofa]
Length = 241
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGA 128
+G+
Sbjct: 155 VGS 157
>gi|73974057|ref|XP_532275.2| PREDICTED: proteasome subunit beta type-1 [Canis lupus familiaris]
Length = 241
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGA 128
+G+
Sbjct: 155 VGS 157
>gi|395535314|ref|XP_003769673.1| PREDICTED: proteasome subunit beta type-1 [Sarcophilus harrisii]
Length = 244
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 38 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 97
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 98 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 157
Query: 126 IGA 128
+G+
Sbjct: 158 VGS 160
>gi|213401303|ref|XP_002171424.1| proteasome component C5 [Schizosaccharomyces japonicus yFS275]
gi|211999471|gb|EEB05131.1| proteasome component C5 [Schizosaccharomyces japonicus yFS275]
Length = 193
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 67/123 (54%), Gaps = 2/123 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQ 65
NG +V + G++ IA D R V I T F R+ ++ D+L +G +G D+ TL +
Sbjct: 12 NGGTIVGIAGEDFSIIAGDTR-NVNGYNINTRFSPRVHEVGDKLILGATGFEADALTLVK 70
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
R+ R LY +R M P + + +V +LY KRF PY+ ++AGL ++ + + D
Sbjct: 71 RIRQRIDLYHDNHKRIMSPSSCSRMVQTMLYGKRFFPYYVYTLVAGLDEKGVGALYSFDP 130
Query: 126 IGA 128
+G+
Sbjct: 131 VGS 133
>gi|126311312|ref|XP_001381658.1| PREDICTED: proteasome subunit beta type-1-like [Monodelphis
domestica]
Length = 244
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 38 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 97
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 98 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 157
Query: 126 IGA 128
+G+
Sbjct: 158 VGS 160
>gi|219119376|ref|XP_002180450.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407923|gb|EEC47858.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 227
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 72/150 (48%), Gaps = 28/150 (18%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +L+AM GK+C A+A DRR G + + + L +G +G+ D Q+L Q
Sbjct: 2 NGGSLLAMAGKDCVALAVDRRFGSGPALVNVGPRSVLAPSSLLLVGFTGMEGDVQSLKQE 61
Query: 67 LVFR-HKLYQ-------LREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL------ 112
L + + YQ +R + P + SL S +LY ++ PYF +P++ GL
Sbjct: 62 LAAQVARKYQRGMGISGTENQRFISPRSMTSLTSHVLYNRKRAPYFVEPLVIGLEPCVSE 121
Query: 113 -------SDED-------KPFICTMDSIGA 128
SD +P++C++D IGA
Sbjct: 122 KKMSPISSDATVNSTTAYRPYLCSLDMIGA 151
>gi|323455458|gb|EGB11326.1| hypothetical protein AURANDRAFT_52492 [Aureococcus anophagefferens]
Length = 229
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 6/132 (4%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
Y+G +++AM GK A+ D+RLG + + R+ + R + L GL D QTL +
Sbjct: 23 YHGGSVLAMAGKKSVALVLDKRLGQGNALVGDEACRVLECGPRAVLALRGLQGDVQTLLE 82
Query: 66 RLVFRHKLYQLREERDM--KPETFASLVSALLYEKRFG----PYFCQPVIAGLSDEDKPF 119
+ + +L +L E +P+ ++LVS +LY R Y +PVI GL + P+
Sbjct: 83 DVDAKLRLRRLEEGPSAASEPKAVSALVSVMLYGGRLSGGAPGYAVEPVICGLGADGAPY 142
Query: 120 ICTMDSIGAKYV 131
+C D +GA+ V
Sbjct: 143 LCAQDGLGARMV 154
>gi|224006550|ref|XP_002292235.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971877|gb|EED90210.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 184
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 66/128 (51%), Gaps = 8/128 (6%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIA---TDFQRISKIHDRLFIGLSGLATDSQT 62
+NG +++AM G+N AIA D R G+ +QTIA TD S + R+ + L +
Sbjct: 1 FNGGSILAMSGRNSVAIAIDARFGLGMQTIATMNTDNDDASDGNPRIVL----LPNSNTL 56
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSD-EDKPFIC 121
L ++ + E M P LVS LLY +R PY+ +PV+ GL + P++
Sbjct: 57 LAWTGLYGDGISFAEEMNKMSPRAITMLVSHLLYRRRSAPYYVEPVVVGLENVRVPPYLV 116
Query: 122 TMDSIGAK 129
T D +GA+
Sbjct: 117 TTDMLGAQ 124
>gi|431904620|gb|ELK10002.1| Proteasome subunit beta type-1 [Pteropus alecto]
Length = 241
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGA 128
+G+
Sbjct: 155 VGS 157
>gi|395839143|ref|XP_003792460.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1
[Otolemur garnettii]
Length = 343
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 137 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 196
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 197 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 256
Query: 126 IGA 128
+G+
Sbjct: 257 VGS 259
>gi|37231712|gb|AAH58455.1| Proteasome (prosome, macropain) subunit, beta type 1 [Rattus
norvegicus]
gi|149047099|gb|EDL99819.1| proteasome (prosome, macropain) subunit, beta type 1, isoform CRA_a
[Rattus norvegicus]
Length = 240
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 34 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 93
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 94 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 153
Query: 126 IGA 128
+G+
Sbjct: 154 VGS 156
>gi|357605013|gb|EHJ64427.1| proteasome subunit beta 1 [Danaus plexippus]
Length = 232
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 64/121 (52%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++VA+ G + I +D RL + +++ K+ DR +G +G D+ TL +
Sbjct: 27 NGGSVVAIAGDDYAVIGADTRLSTGFSIYTREQKKLFKLSDRTVLGATGCWCDTLTLTRL 86
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R ++Y+ + M A ++S +LY KRF PY+ V+AGL E K + + D I
Sbjct: 87 LQARMQMYEHEHNKAMSTPAVAQMLSTMLYYKRFFPYYISNVLAGLDAEGKGCVYSYDPI 146
Query: 127 G 127
G
Sbjct: 147 G 147
>gi|383853088|ref|XP_003702056.1| PREDICTED: proteasome subunit beta type-1-like [Megachile
rotundata]
Length = 236
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 74/144 (51%), Gaps = 4/144 (2%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +++A+ G + IA+D RL V + Q++ + + +G SG D+ TL +
Sbjct: 31 NGGSVIALAGDDFCVIAADTRLSVGFSIYTREQQKLFPLSSKTVLGCSGCWCDTLTLTRF 90
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R ++Y+ +++M A ++S +LY +RF PY+ +I GL D+ + + D I
Sbjct: 91 LSARMQMYEHEHQKEMATPAVAQMLSTMLYYRRFFPYYISNIIGGLDDKGHGCVYSYDPI 150
Query: 127 G----AKYVGSLQKILLLLELLES 146
G AKY LL LL++
Sbjct: 151 GHCEAAKYRAGGSAGALLQPLLDN 174
>gi|149744029|ref|XP_001499422.1| PREDICTED: proteasome subunit beta type-1-like [Equus caballus]
Length = 241
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTILAIAGEDFSIVASDTRLSEGYSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGA 128
+G+
Sbjct: 155 VGS 157
>gi|62897947|dbj|BAD96913.1| proteasome beta 1 subunit variant [Homo sapiens]
Length = 241
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + ++ D+ IG SG D TL +
Sbjct: 35 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYRLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGA 128
+G+
Sbjct: 155 VGS 157
>gi|195037993|ref|XP_001990445.1| GH19348 [Drosophila grimshawi]
gi|193894641|gb|EDV93507.1| GH19348 [Drosophila grimshawi]
Length = 200
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 7/124 (5%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+Y +++AM GK+C AIA V+ I + + K+ RL++GL+G D Y
Sbjct: 6 DYCNGSIIAMHGKDCVAIA------VKGGNINDSNKNLYKLGARLYLGLTGRLADILMAY 59
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLS-DEDKPFICTM 123
+ L+ R +++L + R++ P+ ++S LLY R P+ + VI G+ D +P IC++
Sbjct: 60 KHLILRKNIFELEKNRELLPKELTLILSQLLYAHRLVPFQIEAVIVGMDPDTLEPHICSL 119
Query: 124 DSIG 127
IG
Sbjct: 120 GMIG 123
>gi|327262119|ref|XP_003215873.1| PREDICTED: proteasome subunit beta type-1-like [Anolis
carolinensis]
Length = 239
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D IG SG D TL +
Sbjct: 33 FNGGTILAIAGEDFSIVASDTRLSEDYAVHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTK 92
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 93 IIEARLKMYKHSNNKIMSAGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 152
Query: 126 IGA 128
+G+
Sbjct: 153 VGS 155
>gi|414886160|tpg|DAA62174.1| TPA: hypothetical protein ZEAMMB73_205941 [Zea mays]
Length = 152
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 57/115 (49%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
+ E NG VA+ G + +A+D RL V + D +I + D+ + SG D +
Sbjct: 8 VYENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKA 67
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDK 117
L++ L R LYQ + + M A L+S LY KRF PY+ V+ GL E K
Sbjct: 68 LHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGK 122
>gi|16758370|ref|NP_446042.1| proteasome subunit beta type-1 precursor [Rattus norvegicus]
gi|130854|sp|P18421.3|PSB1_RAT RecName: Full=Proteasome subunit beta type-1; AltName:
Full=Macropain subunit C5; AltName: Full=Multicatalytic
endopeptidase complex subunit C5; AltName:
Full=Proteasome component C5; AltName: Full=Proteasome
gamma chain; Flags: Precursor
gi|56998|emb|CAA36987.1| proteasome subunit RC5 [Rattus norvegicus]
Length = 240
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 34 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 93
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 94 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIEGLDEEGKGAVYSFDP 153
Query: 126 IGA 128
+G+
Sbjct: 154 VGS 156
>gi|197129773|gb|ACH46271.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
Length = 238
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 66/123 (53%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ +R IG +G D TL +
Sbjct: 32 FNGGTVLAIAGEDFCIVASDTRLSEGYSIHSRDSPKCYKLTERTVIGCTGFHGDCLTLTK 91
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 92 IIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 151
Query: 126 IGA 128
+G+
Sbjct: 152 VGS 154
>gi|307107838|gb|EFN56080.1| hypothetical protein CHLNCDRAFT_22624 [Chlorella variabilis]
Length = 239
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 64/122 (52%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VA+ G + +A+ R+ + + +I +++ + I +G+ D +TL++
Sbjct: 30 NGGTVVAVAGDDYCVVAASTRMSTGYSILTRNKSKILQLNPKCVIASAGMQADQETLHKV 89
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L RH YQ + M A L+S LY KRF PY+ + AGL DE + + T D+I
Sbjct: 90 LHSRHVTYQFNHRKPMACPAMAQLLSNTLYYKRFFPYYTFNLCAGLDDEGRGAVYTYDAI 149
Query: 127 GA 128
G+
Sbjct: 150 GS 151
>gi|387017846|gb|AFJ51041.1| Proteasome subunit beta type-1-like [Crotalus adamanteus]
Length = 239
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + + + K+ D IG SG D TL +
Sbjct: 33 FNGGTILAIAGEDFVVVASDTRLSEDYAIHSRNSPKCYKLTDTTVIGCSGFHGDCLTLTK 92
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
L R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 93 ILEARLKMYKHSNNKIMSSGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 152
Query: 126 IGA 128
+G+
Sbjct: 153 VGS 155
>gi|91092850|ref|XP_968855.1| PREDICTED: similar to proteasome beta subunit [Tribolium castaneum]
gi|270003046|gb|EEZ99493.1| hypothetical protein TcasGA2_TC000069 [Tribolium castaneum]
Length = 235
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 62/121 (51%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++VA+ G + I +D RL D ++ ++ D +G SG D+ TL +
Sbjct: 30 NGGSVVAIAGDDFVVIGADTRLSAGFSIYTRDQNKLFRLSDTTVLGCSGCWCDTLTLTRI 89
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R ++YQ + M A ++S +LY KRF PY+ ++ GL +E K I + D I
Sbjct: 90 LSARMQMYQQEHNKTMATPACAQMLSTMLYYKRFFPYYISNILVGLDNEGKGCIYSYDPI 149
Query: 127 G 127
G
Sbjct: 150 G 150
>gi|350539311|ref|NP_001232140.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129774|gb|ACH46272.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129776|gb|ACH46274.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129778|gb|ACH46276.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129780|gb|ACH46278.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129781|gb|ACH46279.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129782|gb|ACH46280.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129783|gb|ACH46281.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
Length = 238
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 66/123 (53%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ +R IG +G D TL +
Sbjct: 32 FNGGTVLAIAGEDFCIVASDTRLSEGYSIHSRDSPKCYKLTERTVIGCTGFHGDCLTLTK 91
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 92 IIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 151
Query: 126 IGA 128
+G+
Sbjct: 152 VGS 154
>gi|410960369|ref|XP_003986764.1| PREDICTED: proteasome subunit beta type-1 [Felis catus]
Length = 241
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + ++ D+ IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFSIVASDTRLSEGYSIHTRDSPKCYRLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 95 IIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 154
Query: 126 IGA 128
+G+
Sbjct: 155 VGS 157
>gi|66512107|ref|XP_395163.2| PREDICTED: proteasome subunit beta type-1 [Apis mellifera]
Length = 236
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 4/144 (2%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +++A+ G N IA+D RL + Q++ + + +G SG D+ TL +
Sbjct: 31 NGGSVIALAGDNFCVIAADTRLSTGFSIYTREQQKLFPLSSKTVLGCSGCWCDTLTLTRI 90
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R ++Y+ +++M A ++S +LY KRF PY+ ++ GL + K + + D I
Sbjct: 91 LSARMQMYEHEHQKEMPTPAVAQMLSTMLYYKRFFPYYVSNILGGLDENGKGCVYSYDPI 150
Query: 127 G----AKYVGSLQKILLLLELLES 146
G KY LL LL++
Sbjct: 151 GHCEITKYRAGGSAGALLQPLLDN 174
>gi|253747271|gb|EET02070.1| Proteasome subunit beta type 1 [Giardia intestinalis ATCC 50581]
Length = 220
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 65/122 (53%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++A+ G + IA D RL ++ + +++ + D++ SG+ D Q L +
Sbjct: 20 NGGTIIAIAGPDFAIIAGDTRLSEGYNILSRNVRKVFPVTDKIVYAASGMHADVQRLIKH 79
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
+ Y L+ +R+M E F L+SA++Y +R P++ ++AG+ E K + + D I
Sbjct: 80 MKIESTDYHLKTQREMAIEQFTRLLSAMMYYRRSFPWYTSSIVAGIDSEGKGAVYSYDVI 139
Query: 127 GA 128
G+
Sbjct: 140 GS 141
>gi|197129784|gb|ACH46282.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
Length = 238
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 66/123 (53%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ +R IG +G D TL +
Sbjct: 32 FNGGTVLAIAGEDFCIVASDTRLSEGYSIHSRDSPKCYKLTERTVIGCTGFHGDCLTLTK 91
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 92 IIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 151
Query: 126 IGA 128
+G+
Sbjct: 152 VGS 154
>gi|449278062|gb|EMC86029.1| Proteasome subunit beta type-1 [Columba livia]
Length = 237
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ +R IG SG D TL +
Sbjct: 31 FNGGTVLAIAGEDFSLVASDTRLSEGYAIHCRDSPKCYKLTERTVIGCSGFHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 91 IIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 150
Query: 126 IGA 128
+G+
Sbjct: 151 VGS 153
>gi|351714661|gb|EHB17580.1| Proteasome subunit beta type-1 [Heterocephalus glaber]
Length = 240
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + + K+ D+ IG SG D TL +
Sbjct: 34 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRNSPKCYKLTDKTVIGCSGFHGDCLTLTK 93
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 94 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 153
Query: 126 IGA 128
+G+
Sbjct: 154 VGS 156
>gi|211939905|gb|ACJ13433.1| proteasome subunit beta 1 [Helicoverpa armigera]
Length = 232
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 64/121 (52%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++VA+ G + I +D RL + +++ K+ D+ +G +G D+ TL +
Sbjct: 27 NGGSIVAIAGDDFAVIGADTRLSTGFSIYTREQKKLFKLSDKTVLGATGCWCDTLTLTRL 86
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R ++Y+ + M A ++S +LY KRF PY+ V+AGL + K + + D I
Sbjct: 87 LSARMQMYEHEHNKSMSTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDADGKGCVYSYDPI 146
Query: 127 G 127
G
Sbjct: 147 G 147
>gi|359473811|ref|XP_002264176.2| PREDICTED: proteasome subunit beta type-1-like [Vitis vinifera]
Length = 149
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
S+ NG + VA+ G + I S R+ + + D+ +I K+ D+ + SG D +
Sbjct: 9 SLYNNNGGSCVAIAGADYCVITSGTRMSIGYNILTCDYSKICKLADKCVMASSGFQADVR 68
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
L + L R +YQ + + M A L+S LY KRF PY+ V+ GL +E K +
Sbjct: 69 ALQKHLAARQLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGWRW 128
Query: 122 TMD 124
D
Sbjct: 129 RFD 131
>gi|17380207|sp|Q9IB84.1|PSB1A_CARAU RecName: Full=Proteasome subunit beta type-1-A; AltName: Full=20S
proteasome beta-6 subunit A; Short=B6-A
gi|7768839|dbj|BAA95591.1| 20S proteasome beta 6 subunit [Carassius auratus]
Length = 238
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 80/162 (49%), Gaps = 13/162 (8%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D IG SG D TL +
Sbjct: 32 FNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTK 91
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E + + + D
Sbjct: 92 IIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSFDP 151
Query: 126 IGA------KYVGSLQKIL-------LLLELLESLFMVPVRQ 154
+G+ K GS +L + + +E++ VP+ Q
Sbjct: 152 VGSYQRDTYKAGGSASAMLQPLLDNQIGFKNMENVEQVPLSQ 193
>gi|332019508|gb|EGI59987.1| Proteasome subunit beta type-1 [Acromyrmex echinatior]
Length = 237
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 64/121 (52%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++VA+ G + IA+D RL + ++ + D +G SG D+ TL +
Sbjct: 32 NGGSVVALAGDDFCVIAADTRLSTGFTIHTRNQDKLFPLSDTTILGCSGCWCDTTTLTRL 91
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R ++Y+ +++M A ++S +LY KRF PY+ ++AGL + K I + D I
Sbjct: 92 LSARMQMYKHEHQKEMSTPATAQMLSIMLYHKRFFPYYVSNILAGLDENGKGCIYSYDPI 151
Query: 127 G 127
G
Sbjct: 152 G 152
>gi|17380206|sp|Q9IB83.1|PSB1B_CARAU RecName: Full=Proteasome subunit beta type-1-B; AltName: Full=20S
proteasome beta-6 subunit B; Short=B6-B
gi|7768841|dbj|BAA95592.1| 20S proteasome beta 6 subunit [Carassius auratus]
Length = 237
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 80/162 (49%), Gaps = 13/162 (8%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D IG SG D TL +
Sbjct: 31 FNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E + + + D
Sbjct: 91 IIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSFDP 150
Query: 126 IGA------KYVGSLQKIL-------LLLELLESLFMVPVRQ 154
+G+ K GS +L + + +E++ VP+ Q
Sbjct: 151 VGSYQRDTYKAGGSASAMLQPLLDNQIGFKNMENVEQVPLSQ 192
>gi|148227103|ref|NP_001080435.1| proteasome beta 1 subunit [Xenopus laevis]
gi|27694605|gb|AAH43739.1| Psmb1-prov protein [Xenopus laevis]
gi|114107802|gb|AAI23122.1| Psmb1 protein [Xenopus laevis]
Length = 239
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G + +ASD RL + + + K+ D+ IG +G D TL +
Sbjct: 33 FNGGTVLALAGDDFALVASDTRLSEGYSIHSRNTPKCYKLTDKTVIGCTGFHADCLTLTK 92
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 93 IIEARLKMYKHSNNKTMTSGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 152
Query: 126 IGA 128
+G+
Sbjct: 153 VGS 155
>gi|357148563|ref|XP_003574814.1| PREDICTED: proteasome subunit beta type-1-like [Brachypodium
distachyon]
Length = 219
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 4/151 (2%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG VA+ G + +A+D RL V ++ +I+ + D+ + SG D + L
Sbjct: 8 ENNGGTCVAVAGADYCVVAADTRLSVGYSILSRAHSKIAHLADKCVLASSGFQGDIKALQ 67
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L + +Y+ + M A L+S LY KRF PY+ V+ GL E K + T D
Sbjct: 68 KNLTAKELVYEHNHNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYD 127
Query: 125 SIGA----KYVGSLQKILLLLELLESLFMVP 151
++G+ Y L++ +L++ P
Sbjct: 128 AVGSYERTGYSAQGTGATLMMPVLDNQLKSP 158
>gi|389584151|dbj|GAB66884.1| proteasome subunit beta type 1 [Plasmodium cynomolgi strain B]
Length = 241
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 67/122 (54%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + GK+ +A+D RL + +ISK+ D+ IG SG+ +D +TL+
Sbjct: 37 NGGTVIGVTGKDYVILAADTRLSLSYSIYTRHCPKISKLTDKCIIGSSGMQSDIKTLHSL 96
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L + +L+ L A L+ +LY +RF PY+ ++AG+S+E+K + D+I
Sbjct: 97 LKKKIELFVLEHAHYPDIHVIARLLCVILYSRRFFPYYTFNLLAGVSNENKGVLYNYDAI 156
Query: 127 GA 128
G+
Sbjct: 157 GS 158
>gi|348534148|ref|XP_003454565.1| PREDICTED: proteasome subunit beta type-1-A-like [Oreochromis
niloticus]
Length = 237
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D +G SG D TL +
Sbjct: 31 FNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVLGCSGFHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 91 IIDARLKMYKHSNNKTMTSGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 150
Query: 126 IGA 128
+G+
Sbjct: 151 VGS 153
>gi|384253987|gb|EIE27461.1| N-terminal nucleophile aminohydrolase [Coccomyxa subellipsoidea
C-169]
Length = 249
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 63/124 (50%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG VA+ G + +AS RL ++ D + K+ D+L I G D++TL+
Sbjct: 38 DNNGGTCVAVAGNDYCIVASSTRLSTGFSILSRDVSMVLKLSDKLMILSPGFQADAKTLH 97
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L R+ YQ R M A L+ LY KRF PY+ + AGL +E K + + D
Sbjct: 98 KVLQQRYIRYQFDHGRPMSVAACAQLLGNTLYYKRFFPYYTFNICAGLDEEGKGAVYSYD 157
Query: 125 SIGA 128
+IG+
Sbjct: 158 AIGS 161
>gi|209734840|gb|ACI68289.1| Proteasome subunit beta type-1-A [Salmo salar]
Length = 237
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D IG SG D TL +
Sbjct: 31 FNGGTVLAVAGEDFAVVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 91 IIDARLKMYKHSNNKCMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAVYSFDP 150
Query: 126 IGA 128
+G+
Sbjct: 151 VGS 153
>gi|47217169|emb|CAG11005.1| unnamed protein product [Tetraodon nigroviridis]
Length = 237
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 64/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G + +ASD RL + D + K+ D IG SG D TL +
Sbjct: 31 FNGGTVLAVAGDDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 91 IIDARLKMYKHSNNKTMSSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAVYSFDP 150
Query: 126 IGA 128
+G+
Sbjct: 151 VGS 153
>gi|326915585|ref|XP_003204095.1| PREDICTED: proteasome subunit beta type-1-like [Meleagris
gallopavo]
Length = 237
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ + IG SG D TL +
Sbjct: 31 FNGGTVLAIAGEDFCIVASDTRLSEGYAIHSRDSPKCYKLTEHTVIGCSGFHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 91 IIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 150
Query: 126 IGA 128
+G+
Sbjct: 151 VGS 153
>gi|225703280|gb|ACO07486.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
Length = 237
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D IG SG D TL +
Sbjct: 31 FNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTE 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 91 IIDARLKMYKHSNNKCMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAVYSFDP 150
Query: 126 IGA 128
+G+
Sbjct: 151 VGS 153
>gi|225716016|gb|ACO13854.1| Proteasome subunit beta type-1-A [Esox lucius]
Length = 237
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D IG SG D TL +
Sbjct: 31 FNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E + + + D
Sbjct: 91 IIDARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSFDP 150
Query: 126 IGA 128
+G+
Sbjct: 151 VGS 153
>gi|335955152|gb|AEH76582.1| proteasome subunit beta type [Epinephelus bruneus]
Length = 225
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D IG SG D TL +
Sbjct: 19 FNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTK 78
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 79 IIDARLKMYKHSNNKTMTCGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAVYSFDP 138
Query: 126 IGA 128
+G+
Sbjct: 139 VGS 141
>gi|389609037|dbj|BAM18130.1| proteasome 26kD subunit [Papilio xuthus]
Length = 232
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 65/121 (53%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++VA+ G++ I +D RL + +++ K+ +R +G +G D+ TL +
Sbjct: 27 NGGSVVAIAGEDYAVIGADTRLSTGFSIYTREQKKLFKLSERTVLGATGCWCDTLTLTRL 86
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R ++Y+ + M A ++S +LY KRF PY+ ++AGL + K I + D I
Sbjct: 87 LQARMQMYEHEHNKAMTTPAVAQMLSTMLYYKRFFPYYVSNILAGLDADGKGCIYSYDPI 146
Query: 127 G 127
G
Sbjct: 147 G 147
>gi|380018248|ref|XP_003693045.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1-like
[Apis florea]
Length = 237
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ G +++A+ G N IA+D RL + Q++ + + +G SG D+ TL
Sbjct: 30 DNGGKSVIALAGDNFCVIAADTRLSTGFSIYTREQQKLXPLSSKTVLGCSGCWCDTLTLT 89
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L R ++Y+ +++M A ++S +LY KRF PY+ ++ GL + K + + D
Sbjct: 90 RILSARMQMYEHEHQKEMPTPAVAQMLSTMLYYKRFFPYYVSNILGGLDENGKGCVYSYD 149
Query: 125 SIG----AKYVGSLQKILLLLELLES 146
IG KY LL LL++
Sbjct: 150 PIGHCEITKYRAGGSAGALLQPLLDN 175
>gi|225704042|gb|ACO07867.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
Length = 237
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D IG SG D TL +
Sbjct: 31 FNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 91 IIDARLKMYKHSNNKCMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAVYSFDP 150
Query: 126 IGA 128
+G+
Sbjct: 151 VGS 153
>gi|45360639|ref|NP_988993.1| proteasome beta 1 subunit [Xenopus (Silurana) tropicalis]
gi|38174388|gb|AAH61284.1| proteasome (prosome, macropain) subunit, beta type, 1 [Xenopus
(Silurana) tropicalis]
gi|89272031|emb|CAJ83174.1| proteasome (prosome macropain) subunit beta type 1 [Xenopus
(Silurana) tropicalis]
Length = 239
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 64/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G + +ASD RL + + + K+ D IG +G D TL +
Sbjct: 33 FNGGTVLALAGDDFALVASDTRLSEGYSIHSRNTPKCYKLTDNTVIGCTGFHADCLTLTK 92
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 93 IIEARLKMYKHSNNKTMTSGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 152
Query: 126 IGA 128
+G+
Sbjct: 153 VGS 155
>gi|151301141|ref|NP_001093092.1| proteasome beta subunit [Bombyx mori]
gi|95102764|gb|ABF51323.1| proteasome beta subunit [Bombyx mori]
Length = 232
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 63/121 (52%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++VA+ G + I +D RL D +++ K+ + +G +G D+ TL +
Sbjct: 27 NGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDTLTLTRL 86
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R ++Y+ + M A ++S +LY KRF PY+ V+AGL + K + + D I
Sbjct: 87 LQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCVYSYDPI 146
Query: 127 G 127
G
Sbjct: 147 G 147
>gi|344306709|ref|XP_003422027.1| PREDICTED: hypothetical protein LOC100675710 [Loxodonta africana]
Length = 560
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 63/120 (52%)
Query: 9 SALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLV 68
S ++A+ G++ +ASD RL D + K+ D+ IG SG D TL + +
Sbjct: 357 STVLAIAGEDFSIVASDTRLSEGFSVHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIE 416
Query: 69 FRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGA 128
R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D +G+
Sbjct: 417 ARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGS 476
>gi|225705074|gb|ACO08383.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
Length = 237
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D IG SG D TL +
Sbjct: 31 FNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 91 IIDARLKMYKHSNNKCMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAVYSFDP 150
Query: 126 IGA 128
+G+
Sbjct: 151 VGS 153
>gi|209732446|gb|ACI67092.1| Proteasome subunit beta type-1-A [Salmo salar]
Length = 237
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ + IG SG D TL +
Sbjct: 31 FNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTNTTVIGCSGFHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 91 IIDARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAVYSFDP 150
Query: 126 IGA 128
+G+
Sbjct: 151 VGS 153
>gi|410912074|ref|XP_003969515.1| PREDICTED: proteasome subunit beta type-1-B-like [Takifugu
rubripes]
Length = 237
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 79/162 (48%), Gaps = 13/162 (8%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G + +ASD RL + D + K+ D +G SG D TL +
Sbjct: 31 FNGGTVLAVAGDDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVLGCSGFHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 91 IIDARLKMYKHSNNKTMSSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAVYSFDP 150
Query: 126 IGA------KYVGSLQKIL-------LLLELLESLFMVPVRQ 154
+G+ K GS +L + + +E++ VP+ Q
Sbjct: 151 VGSYQRDTYKAGGSASAMLQPLLDNQIGFKNMENVQQVPLSQ 192
>gi|229367074|gb|ACQ58517.1| Proteasome subunit beta type-1-A [Anoplopoma fimbria]
Length = 237
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 64/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D IG SG D TL +
Sbjct: 31 FNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL + K + + D
Sbjct: 91 IIDARLKMYKHSNNKTMTSNAIAAMLSTILYGRRFFPYYVYNIIGGLDEHGKGAVYSFDP 150
Query: 126 IGA 128
+G+
Sbjct: 151 VGS 153
>gi|229367266|gb|ACQ58613.1| Proteasome subunit beta type-1-A [Anoplopoma fimbria]
Length = 237
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 64/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D IG SG D TL +
Sbjct: 31 FNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL + K + + D
Sbjct: 91 IIDARLKMYKHSNNKTMTSNAIAAMLSTILYGRRFFPYYVYNIIGGLDEHGKGAVYSFDP 150
Query: 126 IGA 128
+G+
Sbjct: 151 VGS 153
>gi|198468365|ref|XP_002134014.1| GA27033 [Drosophila pseudoobscura pseudoobscura]
gi|198146380|gb|EDY72641.1| GA27033 [Drosophila pseudoobscura pseudoobscura]
Length = 198
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 6/127 (4%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
SI G ++VAM G C AIA+D + + D+ + ++H +++ LSG D
Sbjct: 3 SIASILGGSVVAMAGNECVAIATDHIILHDGEKYDYDYGNLFQVHPYIYVALSGCEQDII 62
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPFI 120
+ R++ R ++ ++ PE +A +S L E R PY + V+AGL+ E +PFI
Sbjct: 63 RVRNRMLLRQNMFG-----NVTPEIYAKNLSNYLKEPRLKPYQIESVVAGLNTETVEPFI 117
Query: 121 CTMDSIG 127
C ++ G
Sbjct: 118 CGVNGSG 124
>gi|389611001|dbj|BAM19111.1| proteasome 26kD subunit [Papilio polytes]
Length = 232
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 64/121 (52%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++VA+ G + I +D RL + +++ K+ +R +G +G D+ TL +
Sbjct: 27 NGGSVVAIAGDDYAVIGADTRLSTGFSIYTREQKKLFKLSERTVLGATGCWCDTLTLTRL 86
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R ++Y+ + M A ++S +LY KRF PY+ ++AGL + K I + D I
Sbjct: 87 LQARMQMYEHEHNKAMTTPAVAQMLSTMLYYKRFFPYYVSNILAGLDADGKGCIYSYDPI 146
Query: 127 G 127
G
Sbjct: 147 G 147
>gi|56118302|ref|NP_001007906.1| proteasome subunit beta type-1 [Gallus gallus]
gi|38680347|gb|AAR26544.1| proteasome subunit beta-type [Gallus gallus]
Length = 237
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 66/123 (53%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + ++ ++ IG SG D TL +
Sbjct: 31 FNGGTVLAIAGEDFCIVASDTRLSEGYAIHSRDSPKCYRLTEQTVIGCSGFHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 91 IIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 150
Query: 126 IGA 128
+G+
Sbjct: 151 VGS 153
>gi|340716619|ref|XP_003396794.1| PREDICTED: proteasome subunit beta type-1-like [Bombus terrestris]
Length = 236
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 4/144 (2%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +++A+ G + IA+D RL + Q++ + + +G SG D+ TL +
Sbjct: 31 NGGSVIALAGDDFCVIAADTRLSTGFSIYTREQQKLFPLSSKTILGCSGCWCDTLTLTRL 90
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R ++Y+ +++M A ++S +LY KRF PY+ ++ GL ++ K + + D I
Sbjct: 91 LSARMQMYEHEHQKEMPTLAVAQMLSTMLYYKRFFPYYVSNILGGLDEDGKGCVYSYDPI 150
Query: 127 G----AKYVGSLQKILLLLELLES 146
G KY LL LL++
Sbjct: 151 GHCEVTKYRAGGSAGALLQPLLDN 174
>gi|126460611|ref|YP_001056889.1| proteasome endopeptidase complex protein [Pyrobaculum calidifontis
JCM 11548]
gi|302595828|sp|A3MXQ6.1|PSB2_PYRCJ RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|126250332|gb|ABO09423.1| Proteasome endopeptidase complex [Pyrobaculum calidifontis JCM
11548]
Length = 203
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 67/121 (55%), Gaps = 1/121 (0%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + K +A+++R+ T++T +++ ++DRL I +G+ D QTL + L
Sbjct: 8 GATAVGIKTKEGVVLAAEKRVSYGFYTLSTAGKKVFIVNDRLAIASAGIIADMQTLAKIL 67
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
K Y+L +R A L+S +++ +RF P+F + ++ G+ DE P + MD +G
Sbjct: 68 KLNAKAYELEMKRKPSVHAMAKLLSVVMFSRRFMPFFAEVLVGGIDDEG-PHLIVMDPLG 126
Query: 128 A 128
+
Sbjct: 127 S 127
>gi|51468069|ref|NP_001003889.1| proteasome subunit beta type-1 [Danio rerio]
gi|49619079|gb|AAT68124.1| proteasome beta-subunit C5 [Danio rerio]
gi|55715844|gb|AAH85580.1| Proteasome (prosome, macropain) subunit, beta type, 1 [Danio rerio]
gi|182891728|gb|AAI65077.1| Psmb1 protein [Danio rerio]
Length = 237
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 80/162 (49%), Gaps = 13/162 (8%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D +G SG D TL +
Sbjct: 31 FNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVLGCSGFHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E + + + D
Sbjct: 91 IIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSFDP 150
Query: 126 IGA------KYVGSLQKIL-------LLLELLESLFMVPVRQ 154
+G+ K GS +L + + +E++ VP+ Q
Sbjct: 151 VGSYQRDTYKAGGSASAMLQPLLDNQIGFKNMENVEHVPLTQ 192
>gi|350396993|ref|XP_003484732.1| PREDICTED: proteasome subunit beta type-1-like [Bombus impatiens]
Length = 236
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 4/144 (2%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +++A+ G + IA+D RL + Q++ + + +G SG D+ TL +
Sbjct: 31 NGGSVIALAGDDFCVIAADTRLSTGFSIYTREQQKLFPLSSKTILGCSGCWCDTLTLTRL 90
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R ++Y+ +++M A ++S +LY KRF PY+ ++ GL ++ K + + D I
Sbjct: 91 LSARMQMYEHEHQKEMPTLAVAQMLSTMLYYKRFFPYYVSNILGGLDEDGKGCVYSYDPI 150
Query: 127 G----AKYVGSLQKILLLLELLES 146
G KY LL LL++
Sbjct: 151 GHCEVTKYRAGGSAGALLQPLLDN 174
>gi|18314179|ref|NP_560846.1| proteasome subunit beta [Pyrobaculum aerophilum str. IM2]
gi|74561745|sp|Q8ZST5.1|PSB2_PYRAE RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|18161769|gb|AAL65028.1| proteasome, beta subunit [Pyrobaculum aerophilum str. IM2]
Length = 203
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 69/121 (57%), Gaps = 1/121 (0%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + K+ +A+++R+ T+++ +++ I D+L I +G+ D QTL + L
Sbjct: 8 GATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGKKVFVIDDKLAIASAGIIADMQTLAKIL 67
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
K Y+L +R + A L+S +++ +RF P+F + ++ G+ DE+ P + MD +G
Sbjct: 68 KLNAKAYELEMKRKPSTHSMARLLSVIMFSRRFMPFFAEVLVGGI-DEEGPHLIVMDPLG 126
Query: 128 A 128
+
Sbjct: 127 S 127
>gi|225707182|gb|ACO09437.1| Proteasome subunit beta type 1-A [Osmerus mordax]
Length = 237
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D IG SG D TL +
Sbjct: 31 FNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCPTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL ++ + + + D
Sbjct: 91 IIDARLKMYKHSNNKTMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEQGRGAVYSFDP 150
Query: 126 IGA 128
+G+
Sbjct: 151 VGS 153
>gi|349805257|gb|AEQ18101.1| putative proteasome beta 1 subunit [Hymenochirus curtipes]
Length = 205
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 64/121 (52%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G ++A+ G++ +ASD RL + + + K+ D+ IG SG D TL + +
Sbjct: 1 GGTVLALAGEDFAIVASDTRLSEGYSIHSRNTPKCYKLTDKTVIGCSGFHADCLTLTKII 60
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D +G
Sbjct: 61 EARLKMYKHSNNKTMTSGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVG 120
Query: 128 A 128
+
Sbjct: 121 S 121
>gi|72537676|gb|AAZ73764.1| 20S proteasome beta subunit [Cirrhinus molitorella]
Length = 237
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D +G SG D TL +
Sbjct: 31 FNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVLGCSGFHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E + + + D
Sbjct: 91 IIDARLKMYKHSNNKTMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSFDP 150
Query: 126 IGA 128
+G+
Sbjct: 151 VGS 153
>gi|307170452|gb|EFN62722.1| Proteasome subunit beta type-1 [Camponotus floridanus]
Length = 236
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 64/121 (52%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++VA+ G + IA+D RL + ++ + + +G SG D+ TL +
Sbjct: 31 NGGSVVALAGDDFCVIAADTRLSTGFSIYTREQDKLFPLSNTTILGCSGCWCDTLTLTRL 90
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R ++Y+ +++M A ++S +LY KRF PY+ ++AGL + K I + D I
Sbjct: 91 LSARMQMYKHEHQKEMTTPAAAQMLSIMLYHKRFFPYYVSNILAGLDENGKGCIYSYDPI 150
Query: 127 G 127
G
Sbjct: 151 G 151
>gi|322796740|gb|EFZ19173.1| hypothetical protein SINV_12036 [Solenopsis invicta]
Length = 237
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 64/121 (52%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++VA+ G + IA+D RL + ++ + + +G SG D+ TL +
Sbjct: 32 NGGSVVALAGDDFCVIAADTRLSTGFSIYTREQDKLFSLSNTTILGCSGCWCDTLTLTRL 91
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R ++Y+ +++M A ++S +LY KRF PY+ ++AGL + K I + D I
Sbjct: 92 LSARMQMYKHEHQKEMSTPAAAQMLSIMLYHKRFFPYYVSNILAGLDENGKGCIYSYDPI 151
Query: 127 G 127
G
Sbjct: 152 G 152
>gi|195165827|ref|XP_002023740.1| GL19755 [Drosophila persimilis]
gi|194105874|gb|EDW27917.1| GL19755 [Drosophila persimilis]
Length = 198
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 66/127 (51%), Gaps = 6/127 (4%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
S+ G ++VAM G C AIA+D + + D+ + ++H +++ LSG D
Sbjct: 3 SVASILGGSVVAMAGNECVAIATDHIILHDGENYDFDYGNLFQVHPYIYVALSGCEQDII 62
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFI 120
+ R++ R ++ ++ PE +A +S L E R PY + V+AGL +D +PFI
Sbjct: 63 RVRNRMLLRQNMFG-----NVTPEIYAKNLSNYLKEPRLKPYQVESVVAGLNTDTVEPFI 117
Query: 121 CTMDSIG 127
C ++ G
Sbjct: 118 CGVNGSG 124
>gi|225705308|gb|ACO08500.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
Length = 236
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 67/130 (51%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ + IG SG D TL +
Sbjct: 30 FNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTNTTVIGCSGFHGDCLTLTK 89
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+ +S +LY +RF PY+ +I GL +E K + + D
Sbjct: 90 IIDARLKMYKHSNNKSMTSGAIAATLSTILYGRRFFPYYVYNIIGGLDEEGKGAVYSFDP 149
Query: 126 IGAKYVGSLQ 135
+G+ G+ +
Sbjct: 150 VGSYQRGTYK 159
>gi|432852541|ref|XP_004067299.1| PREDICTED: proteasome subunit beta type-1-B-like [Oryzias latipes]
Length = 237
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D +G SG D TL +
Sbjct: 31 FNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVLGCSGFHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL ++ K + + D
Sbjct: 91 IIDARLKMYKHSNNKTMTSGAIAAMLSTILYSRRFFPYYVYNIIGGLDEQGKGAVYSFDP 150
Query: 126 IGA 128
+G+
Sbjct: 151 VGS 153
>gi|391338616|ref|XP_003743654.1| PREDICTED: proteasome subunit beta type-1-like [Metaseiulus
occidentalis]
Length = 233
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
N LV + G++ I SD RL + + D ++ K+ DR +G SG D +L +
Sbjct: 28 NAGTLVGIAGEDFAVIGSDLRLSLGFSIFSRDQSKLFKLTDRAVLGSSGCWADCVSLNKF 87
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R K Y + M + A S +LY +RF PYF ++AG+ ++ K I + D +
Sbjct: 88 LEIRLKTYGFEHNQPMSTKAIAQCCSTMLYSRRFFPYFAWNILAGIDEDGKGAIYSYDPV 147
Query: 127 G 127
G
Sbjct: 148 G 148
>gi|302774737|ref|XP_002970785.1| hypothetical protein SELMODRAFT_94273 [Selaginella moellendorffii]
gi|302818938|ref|XP_002991141.1| hypothetical protein SELMODRAFT_132999 [Selaginella moellendorffii]
gi|300141072|gb|EFJ07787.1| hypothetical protein SELMODRAFT_132999 [Selaginella moellendorffii]
gi|300161496|gb|EFJ28111.1| hypothetical protein SELMODRAFT_94273 [Selaginella moellendorffii]
Length = 226
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 72/158 (45%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG VA+ G + +A+D RL + + ++ K+ D + SG D +TL
Sbjct: 15 ENNGGTCVAIAGSDYCIVAADTRLSLGYSILTRGHSKLFKLSDTAVMASSGFQADVRTLQ 74
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L R K Y + + M A L+S LY KRF PY+ V+ GL E K + T D
Sbjct: 75 KNLEARQKGYYHQHGKPMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDTEGKGCVYTYD 134
Query: 125 SIGAKYVGSLQKILLLLELLESLFMVPVRQCSSLIWNP 162
++G+ EL+ + ++ S L++ P
Sbjct: 135 AVGSYERTGYSTQGSGAELIMPILDNQLKSASPLLYPP 172
>gi|296004560|ref|XP_002808699.1| proteasome subunit beta type 1, putative [Plasmodium falciparum
3D7]
gi|225631686|emb|CAX63970.1| proteasome subunit beta type 1, putative [Plasmodium falciparum
3D7]
Length = 240
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 69/123 (56%), Gaps = 2/123 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDF-QRISKIHDRLFIGLSGLATDSQTLYQ 65
NG ++ + GK+ +A+D RL + +I T F +ISK+ D+ IG SG+ +D +TL+
Sbjct: 36 NGGTVIGLTGKDYVILAADTRLSLSY-SIYTRFCPKISKLTDKCIIGSSGMQSDIKTLHS 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
L + +L+ L A L+ +LY +RF PY+ ++AG+ + +K + DS
Sbjct: 95 LLQKKIQLFVLEHSHYPDIHVIARLLCVILYSRRFFPYYAFNILAGVDENNKGVLYNYDS 154
Query: 126 IGA 128
+G+
Sbjct: 155 VGS 157
>gi|321473024|gb|EFX83992.1| hypothetical protein DAPPUDRAFT_230628 [Daphnia pulex]
Length = 230
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 64/121 (52%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VA+ G++ IASD RL ++ + ++ K+ ++ +G+SG D T +
Sbjct: 25 NGGTIVAVAGEDFAIIASDTRLIQGYSILSREQTKLFKLSEQTVLGVSGCWCDVLTFTRT 84
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R K+Y + M A LVS +LY KRF PY+ ++AGL + K + + D +
Sbjct: 85 LEARMKMYLHEHLKPMSTPAVAQLVSTMLYHKRFFPYYVSNIVAGLDQDGKGTLYSYDPV 144
Query: 127 G 127
G
Sbjct: 145 G 145
>gi|156365620|ref|XP_001626742.1| predicted protein [Nematostella vectensis]
gi|156213630|gb|EDO34642.1| predicted protein [Nematostella vectensis]
Length = 229
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 64/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ IASD RL Q D ++ K+ +G SG D TL +
Sbjct: 23 FNGGTVLAISGEDFAVIASDTRLSQGFQIHTRDSPKVYKLTGSTVLGCSGFHGDCLTLTK 82
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R ++Y+ + M A ++S +LY +RF PY+ ++AGL E K + + D
Sbjct: 83 HISARLQMYEHDHGKAMSCTAIAQMLSTMLYYRRFFPYYTYNILAGLDSEGKGCVFSFDP 142
Query: 126 IGA 128
+G+
Sbjct: 143 VGS 145
>gi|225703310|gb|ACO07501.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
Length = 237
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 64/122 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D IG SG D TL +
Sbjct: 31 FNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGSHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 91 IIDARLKMYKHSNNKCMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAVYSFDP 150
Query: 126 IG 127
+G
Sbjct: 151 VG 152
>gi|156095478|ref|XP_001613774.1| proteasome subunit beta type 1 [Plasmodium vivax Sal-1]
gi|148802648|gb|EDL44047.1| proteasome subunit beta type 1, putative [Plasmodium vivax]
Length = 241
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 66/122 (54%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + GK+ +A+D RL + +ISK+ D+ IG SG+ +D +TL+
Sbjct: 37 NGGTVIGVTGKDYVILAADTRLSLSYSIYTRHCPKISKLTDKCIIGSSGMQSDIKTLHSL 96
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L + +L+ L A L+ +LY +RF PY+ ++AG+S++ K + D+I
Sbjct: 97 LKKKIELFVLEHAHYPDIHVIARLLCVILYSRRFFPYYTFNLLAGVSNDSKGVLYNYDAI 156
Query: 127 GA 128
G+
Sbjct: 157 GS 158
>gi|255513744|gb|EET90009.1| Proteasome endopeptidase complex [Candidatus Micrarchaeum
acidiphilum ARMAN-2]
Length = 210
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 70/121 (57%), Gaps = 1/121 (0%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V +V + IA+D R + +T+ +++ KI + L + ++GL D+Q L + L
Sbjct: 12 GTTTVGLVCTDGVVIAADSRATMDTFIASTEARKVWKIDENLGMTIAGLVGDAQELIRIL 71
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
++++Y++ E + M P + A+L+S +L E + P++ Q ++ G+ D K ++ +D+ G
Sbjct: 72 KIQNEIYKMNERKQMSPRSAATLLSIILQENKMMPFYVQLIVGGVED-GKGYVYNLDAAG 130
Query: 128 A 128
Sbjct: 131 G 131
>gi|302810458|ref|XP_002986920.1| hypothetical protein SELMODRAFT_124882 [Selaginella moellendorffii]
gi|300145325|gb|EFJ12002.1| hypothetical protein SELMODRAFT_124882 [Selaginella moellendorffii]
Length = 226
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 72/158 (45%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG VA+ G + +A+D RL + + ++ K+ D + SG D +TL
Sbjct: 15 ENNGGTCVAIAGSDYCIVAADTRLSLGYSILTRGHSKLFKLSDTAVMASSGFQADVRTLQ 74
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L R K Y + + M A L+S LY KRF PY+ V+ GL E K + T D
Sbjct: 75 KNLEARQKGYYHQHGKPMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDTEGKGCVYTYD 134
Query: 125 SIGAKYVGSLQKILLLLELLESLFMVPVRQCSSLIWNP 162
++G+ EL+ + ++ S L++ P
Sbjct: 135 AVGSYERTGYSTQGSGAELIMPILDNQLKSASPLLYPP 172
>gi|149549948|ref|XP_001513174.1| PREDICTED: proteasome subunit beta type-1-like, partial
[Ornithorhynchus anatinus]
Length = 261
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 64/118 (54%)
Query: 11 LVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFR 70
++A+ G++ +ASD RL + D + K+ DR IG SG D TL + + R
Sbjct: 2 VLAIAGEDFSIVASDTRLSEGYSIHSRDNPKCYKLTDRTVIGCSGFHGDCLTLTKIIEAR 61
Query: 71 HKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGA 128
K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + +++ IG+
Sbjct: 62 LKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSLNPIGS 119
>gi|119567806|gb|EAW47421.1| proteasome (prosome, macropain) subunit, beta type, 1, isoform
CRA_b [Homo sapiens]
Length = 166
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE 115
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 144
>gi|225714644|gb|ACO13168.1| Proteasome subunit beta type-1 precursor [Lepeophtheirus salmonis]
Length = 238
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 57/121 (47%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG + + GK+ IASD RL ++ D ++ + +G SG D T +
Sbjct: 33 NGGTTIGIAGKDFVVIASDTRLCNSYDILSRDVPKVFDLGGNSVLGASGCWCDVLTFVRV 92
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
R K Y ++M A ++S LY KRF PY+ V+AGL DE + I T D +
Sbjct: 93 AESRIKNYNYTHGKEMSTSALAQMLSITLYRKRFFPYYIHNVLAGLDDEGRGAIFTYDPV 152
Query: 127 G 127
G
Sbjct: 153 G 153
>gi|119567805|gb|EAW47420.1| proteasome (prosome, macropain) subunit, beta type, 1, isoform
CRA_a [Homo sapiens]
Length = 219
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 62/118 (52%)
Query: 11 LVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFR 70
++A+ G++ +ASD RL D + K+ D+ IG SG D TL + + R
Sbjct: 18 ILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEAR 77
Query: 71 HKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGA 128
K+Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D +G+
Sbjct: 78 LKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGS 135
>gi|70954344|ref|XP_746223.1| proteasome subunit beta type 1 [Plasmodium chabaudi chabaudi]
gi|56526764|emb|CAH76320.1| proteasome subunit beta type 1, putative [Plasmodium chabaudi
chabaudi]
Length = 252
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 10/134 (7%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTL--- 63
NG ++ + GK+ +A D RL + + +ISKI D+ IG SG+ +D +TL
Sbjct: 38 NGGTVIGLTGKDYVILAGDTRLSLSYSIYTRNCPKISKITDKCIIGSSGMQSDIKTLHSL 97
Query: 64 ----YQRLVFRHK---LYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED 116
Y + + +HK L+ L A L+ LY +RF PY+ ++AG+ +
Sbjct: 98 LQVCYSKKLRKHKKIQLFYLEHSHYPSVHVIAKLLCVTLYSRRFFPYYTFNILAGIDENG 157
Query: 117 KPFICTMDSIGAKY 130
K + + D+IG+ Y
Sbjct: 158 KGVLYSYDAIGSYY 171
>gi|290562593|gb|ADD38692.1| Proteasome subunit beta type-1 [Lepeophtheirus salmonis]
Length = 238
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 57/121 (47%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG + + GK+ IASD RL ++ D ++ + +G SG D T +
Sbjct: 33 NGGTTIGIAGKDFVVIASDTRLCNSYDILSRDVPKVFDLGGNSVLGASGCWCDVLTFIRV 92
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
R K Y ++M A ++S LY KRF PY+ V+AGL DE + I T D +
Sbjct: 93 AESRIKNYNYTHGKEMSTSALAQMLSITLYRKRFFPYYIHNVLAGLDDEGRGAIFTYDPV 152
Query: 127 G 127
G
Sbjct: 153 G 153
>gi|197129777|gb|ACH46275.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
Length = 149
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 60/112 (53%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ +R IG +G D TL +
Sbjct: 32 FNGGTVLAIAGEDFCIVASDTRLSEGYSIHSRDSPKCYKLTERTVIGCTGFHGDCLTLTK 91
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDK 117
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K
Sbjct: 92 IIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGK 143
>gi|194750661|ref|XP_001957648.1| GF10515 [Drosophila ananassae]
gi|190624930|gb|EDV40454.1| GF10515 [Drosophila ananassae]
Length = 235
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 64/123 (52%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG ++VA+ G + IA+D RL + D ++ K+ D+ +G +G D+ +L
Sbjct: 26 ESNGGSIVAIAGDDFVVIAADTRLSSGYNIHSRDQSKLFKLSDQTVLGSTGCWADTLSLT 85
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
L R + Y+ R M + A ++S +Y +RF PY+ ++AG+ + K + + D
Sbjct: 86 GLLKVRMQGYEHTHLRTMATDAVAQMLSITMYNRRFFPYYVSNILAGIDKDGKGVVYSYD 145
Query: 125 SIG 127
IG
Sbjct: 146 PIG 148
>gi|443688987|gb|ELT91509.1| hypothetical protein CAPTEDRAFT_172055 [Capitella teleta]
Length = 229
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG +++A+ G + +ASD RL + + + K+ D+ + +G D T +
Sbjct: 23 FNGGSIMAIAGDDFAVVASDTRLSEGFSIHSRNAPKTYKLTDKTVLASAGFHGDVLTEIK 82
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
L R K+Y+ + M + A++++ +LY KRF PY+ +I GL +E K + + D
Sbjct: 83 VLEARLKMYEHEHGKKMSSQAIAAMLATILYHKRFFPYYVYNIIGGLDEEGKGCVYSYDP 142
Query: 126 IGA 128
+G+
Sbjct: 143 VGS 145
>gi|119567807|gb|EAW47422.1| proteasome (prosome, macropain) subunit, beta type, 1, isoform
CRA_c [Homo sapiens]
Length = 147
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE 115
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 144
>gi|307214019|gb|EFN89226.1| Proteasome subunit beta type-1 [Harpegnathos saltator]
Length = 236
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 68/128 (53%), Gaps = 14/128 (10%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLF-------IGLSGLATD 59
NG ++VA+ G + +A+D RL +T F ++ D+LF +G SG D
Sbjct: 31 NGGSVVALAGDDFCVVAADTRL-------STGFSIYTRQQDKLFPLSKTTILGCSGCWCD 83
Query: 60 SQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPF 119
+ TL + L R ++Y+ +++M A ++S +LY KRF PY+ ++AGL + K
Sbjct: 84 TLTLTRLLSARMQMYKHEHQKEMSTPATAQMLSTMLYYKRFFPYYVSNILAGLDENGKGC 143
Query: 120 ICTMDSIG 127
I + D IG
Sbjct: 144 IYSYDPIG 151
>gi|221056989|ref|XP_002259632.1| Proteasome subunit beta type [Plasmodium knowlesi strain H]
gi|193809704|emb|CAQ40406.1| Proteasome subunit beta type, putative [Plasmodium knowlesi strain
H]
Length = 241
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 67/122 (54%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + GK+ +A+D RL + +ISK+ D+ IG SG+ +D +TL+
Sbjct: 37 NGGTVIGVTGKDYVILAADTRLSLSYSIYTRYCPKISKLTDKCIIGSSGMQSDIKTLHSL 96
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L + +L+ L A L+ +LY +RF PY+ ++AG+S+++K + D+I
Sbjct: 97 LKKKIELFVLEHGHYPDIHVIARLLCVILYSRRFFPYYTFNLLAGVSNDNKGVLYNYDAI 156
Query: 127 GA 128
G+
Sbjct: 157 GS 158
>gi|452821727|gb|EME28754.1| 20S proteasome subunit beta 6 [Galdieria sulphuraria]
Length = 232
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 72/124 (58%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG +VA+ G++ +++ RLG+ + R S +++R+ + +G+ D+ TL+
Sbjct: 23 QNNGGTVVAIGGEDYCIVSATTRLGLGFAIPTRNVCRYSILNNRVVLATAGMFADTATLH 82
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ + R K+Y+ ++++ + A L+S LY +RF PY+ V+ GL ++ + F+ D
Sbjct: 83 KVIKARVKIYEEQQDKPFGLHSAAQLLSNTLYYRRFFPYYTFNVLGGLDEDGQGFVYGFD 142
Query: 125 SIGA 128
+IG+
Sbjct: 143 AIGS 146
>gi|229366584|gb|ACQ58272.1| Proteasome subunit beta type-1-A [Anoplopoma fimbria]
Length = 237
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 13/162 (8%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D IG SG D TL +
Sbjct: 31 FNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTK 90
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+Y+ + M A+++S +LY + F PY+ +I GL + K + + D
Sbjct: 91 IIDARLKMYKHSNNKTMTSNAIAAMLSTILYGRGFFPYYVYNIIGGLDEHGKGAVYSFDP 150
Query: 126 IGA------KYVGSLQKIL-------LLLELLESLFMVPVRQ 154
+G+ K GS +L + + +E + VP+ Q
Sbjct: 151 VGSYQRDTYKAGGSASAVLQPLLDNQIGFKNMEGVQHVPLTQ 192
>gi|308159821|gb|EFO62339.1| Proteasome subunit beta type 1 [Giardia lamblia P15]
Length = 214
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 65/122 (53%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++A+ G + IA D RL ++ + +++ + D++ SG+ D Q L +
Sbjct: 14 NGGTIIAIAGPDFAIIAGDTRLSEGYNILSRNVRKVFPVTDKIVYAASGMHADVQRLIKH 73
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
+ Y L+ ++++ E F L+SA++Y +R P++ ++AG+ E K + + D I
Sbjct: 74 MKIESTEYYLKTQKEIAIEQFIRLLSAMMYYRRSFPWYTSSIVAGIDSEGKGAVYSYDVI 133
Query: 127 GA 128
G+
Sbjct: 134 GS 135
>gi|405957660|gb|EKC23857.1| Proteasome subunit beta type-1 [Crassostrea gigas]
Length = 229
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +A+ G++ + SD RL D + K+ +G G D TL +
Sbjct: 24 NGGTCLAIAGEDFVVVGSDTRLSQGFSIFTRDLPKTYKLTTSTVLGACGFHGDVLTLTKV 83
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R K+++ + M A+++S +LY +RF PY+ +IAGL +E K + + D +
Sbjct: 84 LNARLKMFEHEHHKKMTTSEIAAMLSTMLYHRRFFPYYVYNLIAGLDEEGKGVVYSFDPV 143
Query: 127 GA 128
G+
Sbjct: 144 GS 145
>gi|195998844|ref|XP_002109290.1| hypothetical protein TRIADDRAFT_20878 [Trichoplax adhaerens]
gi|190587414|gb|EDV27456.1| hypothetical protein TRIADDRAFT_20878 [Trichoplax adhaerens]
Length = 235
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +V + G N +A D RL + D +I K+ ++ F+G G D TL +
Sbjct: 30 NGGTIVGVAGDNFAILAGDTRLSEGFMIHSRDTSKIYKLTEKTFLGTCGFQGDVLTLTRL 89
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R +Y+ + M + ++S +LY +RF PY+ ++AG+ + K I + D++
Sbjct: 90 LNARLTMYEFEHRKKMSSTAISQMLSTVLYYRRFFPYYTFNILAGIDTDGKGCIYSYDAV 149
Query: 127 G 127
G
Sbjct: 150 G 150
>gi|298711428|emb|CBJ32569.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 251
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 76/154 (49%), Gaps = 4/154 (2%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
++NG +A+ G + +A+D R+ ++ D ++ ++ + I +G TD TL+
Sbjct: 45 DFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLW 104
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L +Y E++M A +++ LY +RF PY+ V+ GL ++ K + + D
Sbjct: 105 KELDVSMTMYDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYD 164
Query: 125 SIGA----KYVGSLQKILLLLELLESLFMVPVRQ 154
+IG+ Y S ++ LL++L R+
Sbjct: 165 AIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRK 198
>gi|414886157|tpg|DAA62171.1| TPA: hypothetical protein ZEAMMB73_205941 [Zea mays]
Length = 228
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 6/126 (4%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
+ E NG VA+ G + +A+D RL V + D +I + D+ + SG D +
Sbjct: 8 VYENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKA 67
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
L++ L R LYQ + + M A L+S LY KRF PY+ V+ K + T
Sbjct: 68 LHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLG------KGCVFT 121
Query: 123 MDSIGA 128
D++G+
Sbjct: 122 YDAVGS 127
>gi|302814429|ref|XP_002988898.1| hypothetical protein SELMODRAFT_235631 [Selaginella moellendorffii]
gi|300143235|gb|EFJ09927.1| hypothetical protein SELMODRAFT_235631 [Selaginella moellendorffii]
Length = 226
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 72/158 (45%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG VA+ G + +A+D RL + + ++ K+ D + SG D +TL
Sbjct: 15 ENNGGTCVAIAGLDYCIVAADTRLSLGYSILTRGHSKLFKLSDTAVMASSGFQADVRTLQ 74
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L R K Y + + M A L+S LY KRF PY+ V+ GL E K + T D
Sbjct: 75 KNLEARQKGYYHQHGKPMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDTEGKGCVYTYD 134
Query: 125 SIGAKYVGSLQKILLLLELLESLFMVPVRQCSSLIWNP 162
++G+ EL+ + ++ S L++ P
Sbjct: 135 AVGSYERTGYSTQGSGAELIMPILDNQLKSASPLLYPP 172
>gi|345560620|gb|EGX43745.1| hypothetical protein AOL_s00215g481 [Arthrobotrys oligospora ATCC
24927]
Length = 266
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 67/130 (51%), Gaps = 5/130 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + GK+ IA D R +++ I L +G+ G++ D + L ++
Sbjct: 33 NGGCILGIAGKDYVIIAGDTRSSEGYSINTRTARKVYDIGSGLILGVVGMSADGEELVRK 92
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
+ + Y+ ++ + A ++S +LY+KRF PY+CQP++ GL +E I + D
Sbjct: 93 VARKIDDYKRNHDKHITVAAAAVMLSRILYQKRFFPYYCQPLLGGLDEEGVGAIYSYD-- 150
Query: 127 GAKYVGSLQK 136
YVGS ++
Sbjct: 151 ---YVGSFER 157
>gi|388851426|emb|CCF54828.1| probable PRE7-20S proteasome subunit(beta6) [Ustilago hordei]
Length = 291
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 69/126 (54%), Gaps = 4/126 (3%)
Query: 5 EYNGSALVAMVGKNCFAIASDRR--LGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
+ NG ++ A+ G + IASD R G +QT ++ +++D+ + +G A D++
Sbjct: 34 DSNGGSIAAVCGTDFCVIASDTRQSTGYNIQTRYK--PKVFRLNDKATLATNGFAADAEA 91
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
L R+ R ++Y+ R M + A ++S +LY KRF PY+ ++ GL +E K + +
Sbjct: 92 LVSRVRQRLEMYRHAHGRSMPLHSIARMISTILYGKRFFPYYVYNILGGLDEEGKGAVYS 151
Query: 123 MDSIGA 128
D +G+
Sbjct: 152 FDPVGS 157
>gi|159118134|ref|XP_001709286.1| Proteasome subunit beta type 1 [Giardia lamblia ATCC 50803]
gi|157437402|gb|EDO81612.1| Proteasome subunit beta type 1 [Giardia lamblia ATCC 50803]
Length = 254
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 65/122 (53%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++A+ G + IA D RL ++ + +++ + D++ SG+ D Q L +
Sbjct: 54 NGGTIIAIAGPDFAMIAGDTRLSEGYNILSRNVRKVFPVTDKIVYAASGMHADVQRLLKH 113
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
+ Y L+ ++++ E F L+SA++Y +R P++ ++AG+ E + + + D I
Sbjct: 114 MKIESTEYYLKTQKEIAIEQFIRLLSAMMYYRRSFPWYTSSIVAGIDSEGRGAVYSYDVI 173
Query: 127 GA 128
G+
Sbjct: 174 GS 175
>gi|197129775|gb|ACH46273.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
Length = 238
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 65/123 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ +R IG +G D TL +
Sbjct: 32 FNGGTVLAIAGEDFCIVASDTRLSEGYSIHSRDSPKCYKLTERTVIGCTGFHGDCLTLTK 91
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ ++Y+ + M A+++S +LY +RF PY+ +I GL +E K + + D
Sbjct: 92 IIEAGGEMYKHSNFKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 151
Query: 126 IGA 128
+G+
Sbjct: 152 VGS 154
>gi|260799786|ref|XP_002594865.1| hypothetical protein BRAFLDRAFT_124448 [Branchiostoma floridae]
gi|229280102|gb|EEN50876.1| hypothetical protein BRAFLDRAFT_124448 [Branchiostoma floridae]
Length = 235
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 66/123 (53%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +A D RL ++ D + K+ D +G G D TL +
Sbjct: 29 WNGGTVLAIAGEDYAVLACDARLSEYFSILSRDSPKRYKLTDMTVLGCCGFHGDVLTLTK 88
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
L R K Y+ + M ++ A+++S +LY +RF PY+ ++AGL +E K + + D
Sbjct: 89 MLDARLKNYKHEHNKTMSCKSIAAMLSTVLYYRRFFPYYTYNILAGLDEEGKGCVYSFDP 148
Query: 126 IGA 128
IG+
Sbjct: 149 IGS 151
>gi|328766922|gb|EGF76974.1| hypothetical protein BATDEDRAFT_92136 [Batrachochytrium
dendrobatidis JAM81]
Length = 231
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 6/124 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIH---DRLFIGLSGLATDSQTL 63
NG +A+ G + IA D R Q + + + + K+H + + G+ DSQTL
Sbjct: 26 NGGTTLAIAGDDFCVIAGDTR---QSEGYSINTRYAPKVHEMRNGTVLATGGMFADSQTL 82
Query: 64 YQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTM 123
+R+ R + YQ + +++M A ++S +LY KRF PYF + GL + K + T
Sbjct: 83 MKRIQQRLEWYQFQHDKNMSAPAMAQMLSTILYYKRFFPYFSWCSVGGLDEHGKGCVYTY 142
Query: 124 DSIG 127
D +G
Sbjct: 143 DPVG 146
>gi|156547425|ref|XP_001605493.1| PREDICTED: proteasome subunit beta type-1-like isoform 1 [Nasonia
vitripennis]
gi|345484470|ref|XP_003425047.1| PREDICTED: proteasome subunit beta type-1-like isoform 2 [Nasonia
vitripennis]
Length = 236
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 69/144 (47%), Gaps = 4/144 (2%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++VA+ G + IA+D RL Q++ + + +G SG D TL +
Sbjct: 31 NGGSVVALAGDDFSLIAADSRLSAGFSIYTRKQQKLFTLSETSVLGCSGCWCDILTLTRV 90
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
+ R ++Y+ + M A ++S +LY KRF PY+ ++AGL +E K I D +
Sbjct: 91 MAARMQMYKHEHHKTMSTPAAAQMLSTMLYYKRFFPYYINNILAGLDEEGKGVIYRYDPV 150
Query: 127 G----AKYVGSLQKILLLLELLES 146
G YV LL LL++
Sbjct: 151 GHCEKNTYVAGGSAGALLQPLLDN 174
>gi|346472379|gb|AEO36034.1| hypothetical protein [Amblyomma maculatum]
Length = 232
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++VA+ G++ IASD RL + ++ K+ ++ +G +G D T +
Sbjct: 27 NGGSIVAIAGEDFAVIASDSRLSTGYSIYTREQSKLFKLSNQCVLGSTGCWCDILTFTRF 86
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R K+Y R M A LV +LY KRF PY+ ++AGL ++ K I D +
Sbjct: 87 LEARMKMYLHEHHRLMSTPAVAQLVVTMLYNKRFFPYYISNILAGLDEDGKGCIYCYDPV 146
Query: 127 G 127
G
Sbjct: 147 G 147
>gi|429329412|gb|AFZ81171.1| proteasome subunit beta type 1, putative [Babesia equi]
Length = 218
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VA KN IA+D RL + + ++ K+ D +G SG+ D L+
Sbjct: 14 NGGTVVAATWKNYAVIAADTRLSIGYAIHTRNVSKMIKLTDTCILGTSGMQADMLALHSA 73
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
+ + +LY+ + A L+S +LY +RF PY+ ++ G+ + +C+ D+I
Sbjct: 74 MERQVELYRFTHHKTPSFGAIAQLLSTILYSRRFFPYYTFNILCGIDENGNGVVCSYDAI 133
Query: 127 G 127
G
Sbjct: 134 G 134
>gi|426355245|ref|XP_004045039.1| PREDICTED: proteasome subunit beta type-1 [Gorilla gorilla gorilla]
Length = 245
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 107 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 166
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE 115
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E
Sbjct: 167 IIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEE 216
>gi|146186065|ref|XP_001032955.2| Proteasome A-type and B-type family protein [Tetrahymena
thermophila]
gi|146143157|gb|EAR85292.2| Proteasome A-type and B-type family protein [Tetrahymena
thermophila SB210]
Length = 247
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 68/135 (50%), Gaps = 3/135 (2%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+N + A+ + +A D+R+ ++ D +++++ D +F+ SG+ D L +
Sbjct: 41 FNAGTVCAIAHGDFVIVAGDKRISQGYSIVSRDISKLARLTDNVFLATSGMYADFAALSK 100
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+L R +Y+ + ASL+S LY KRF PY+ ++AG D+ + + D+
Sbjct: 101 QLSARLHMYKYNNGKQANMRAIASLLSRTLYYKRFFPYYTFNLLAGFDDKGEGLVINYDA 160
Query: 126 IGAKYVGSLQKILLL 140
+G+ G +K +L
Sbjct: 161 VGS---GDFKKYAVL 172
>gi|84996531|ref|XP_952987.1| proteasome subunit [Theileria annulata strain Ankara]
gi|65303983|emb|CAI76362.1| proteasome subunit, putative [Theileria annulata]
Length = 199
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 6/146 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQ 65
NG ++A N IA+D RL Q I T F ++ K+ D+ +G SG+ D L
Sbjct: 14 NGGTVIAATWNNYAVIAADTRLS-QRYLIHTRFSTKLFKLTDKCILGTSGMQADMLALQS 72
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
L + +LY+ R+ A L+S +LY +RF PY+ ++ G+ ++ K +C D+
Sbjct: 73 VLERQIELYRFTHNREPTFNAIAQLLSTVLYGRRFFPYYTFNILCGIDEQGKGVVCGYDA 132
Query: 126 IG----AKYVGSLQKILLLLELLESL 147
+G KY L++ +L++L
Sbjct: 133 VGNYNYEKYTAQGTSSSLVISVLDNL 158
>gi|444732722|gb|ELW72997.1| Glutamate decarboxylase 2 [Tupaia chinensis]
Length = 312
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 60/132 (45%), Gaps = 50/132 (37%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MSI YNG A++AM GK+ AIA+DRR G+Q+Q + TDFQ+I + DR L+GLA
Sbjct: 1 MSIMSYNGGAIMAMKGKSYVAIAADRRFGIQVQMVTTDFQKIFPMGDR----LNGLA--- 53
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED-KPF 119
Y+ + VIAGL + KPF
Sbjct: 54 ------------------------------------------YYTETVIAGLDPKTFKPF 71
Query: 120 ICTMDSIGAKYV 131
IC +D IG V
Sbjct: 72 ICCLDLIGCPMV 83
>gi|443895548|dbj|GAC72894.1| 20S proteasome, regulatory subunit beta type PSMB1/PRE7 [Pseudozyma
antarctica T-34]
Length = 292
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 69/126 (54%), Gaps = 4/126 (3%)
Query: 5 EYNGSALVAMVGKNCFAIASDRR--LGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
+ NG ++ A+ G + IASD R G +QT ++ +++D+ + +G A D++
Sbjct: 33 DSNGGSIAAVCGSDFCVIASDTRQSTGYNIQTRYK--PKVFRLNDKATLATNGFAADAEA 90
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
L R+ R ++Y+ R M + A ++S +LY KRF PY+ ++ GL ++ K + +
Sbjct: 91 LVSRIRQRLEMYRHAHGRSMPLHSIARMISTMLYGKRFFPYYVYNILGGLDEQGKGAVYS 150
Query: 123 MDSIGA 128
D +G+
Sbjct: 151 FDPVGS 156
>gi|195375426|ref|XP_002046502.1| GJ12457 [Drosophila virilis]
gi|194153660|gb|EDW68844.1| GJ12457 [Drosophila virilis]
Length = 235
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 66/123 (53%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG ++VA+ G++ IA+D RL + D ++ K+ + +G +G D+ +L
Sbjct: 26 ESNGGSIVAIAGEDFVVIAADTRLSSGYSIHSRDQSKLFKMSPKTVLGSTGCWCDTLSLT 85
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ R ++Y+ + M + A ++S ++Y +RF PY+ ++AGL + K + + D
Sbjct: 86 GLVKVRMQMYEHTHMKTMSTDAVAQMLSIVMYNRRFFPYYVSNILAGLDKDGKGAVYSYD 145
Query: 125 SIG 127
IG
Sbjct: 146 PIG 148
>gi|195016569|ref|XP_001984439.1| GH16458 [Drosophila grimshawi]
gi|193897921|gb|EDV96787.1| GH16458 [Drosophila grimshawi]
Length = 235
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 65/123 (52%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG ++VA+ G++ IA+D RL + D ++ K+ +G +G D+ +L
Sbjct: 26 ESNGGSIVAIAGEDFVVIAADTRLSSGYSIHSRDQSKLFKLSPHTVLGSTGCWCDTLSLT 85
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ R ++Y+ + M + A ++S ++Y +RF PY+ ++AGL + K + + D
Sbjct: 86 GLMKVRMQMYEHTHMKTMTTDAVAQMLSIVMYNRRFFPYYVSNILAGLDKDGKGVVYSYD 145
Query: 125 SIG 127
IG
Sbjct: 146 PIG 148
>gi|449673686|ref|XP_002167313.2| PREDICTED: proteasome subunit beta type-3-like, partial [Hydra
magnipapillata]
Length = 142
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 69 FRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE-DKPFICTMDSIG 127
FR LY+LRE R + P+ F +++S +LY +RFGPYF +P+IAGL + ++P+I + D IG
Sbjct: 6 FRTNLYELRENRKISPKVFMTIMSNILYGRRFGPYFVEPLIAGLHPKTNEPYIASCDLIG 65
>gi|71028614|ref|XP_763950.1| proteasome beat subunit [Theileria parva strain Muguga]
gi|68350904|gb|EAN31667.1| proteasome beat subunit, putative [Theileria parva]
Length = 218
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 6/147 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQ 65
NG ++A N IA+D RL Q I T F ++ K+ D+ +G SG+ D L
Sbjct: 14 NGGTVIAATWNNYAVIAADTRLS-QRYLIHTRFSTKLFKLTDKCILGTSGMQADMLALQS 72
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
L + +LY+ R+ A L+S +LY +RF PY+ ++ G+ ++ K +C D+
Sbjct: 73 VLERQIELYRYTHNREPTFNAIAQLLSTVLYGRRFFPYYTFNILCGIDEQGKGVVCGYDA 132
Query: 126 IG----AKYVGSLQKILLLLELLESLF 148
+G KY L++ +L++L
Sbjct: 133 VGNYNYEKYTAQGTSSSLVISVLDNLL 159
>gi|388581296|gb|EIM21605.1| 20S proteasome subunit [Wallemia sebi CBS 633.66]
Length = 255
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 73/146 (50%), Gaps = 8/146 (5%)
Query: 1 MSITEY--NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLAT 58
MS Y NG ++A+ GK+ +A D R + ++ +++++ I +G A
Sbjct: 1 MSFNPYTQNGGTVLAIAGKDFCVVAGDTRQSEGFSIQSRYETKVWRLNEKATIAANGFAA 60
Query: 59 DSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKP 118
D + L +R+ +R + Y+ ++M ++ A +V +LY KRF P++ +I G+ DE
Sbjct: 61 DCKQLVKRVKWRLETYKYAHNKEMPLKSIARMVQTMLYGKRFFPFYSYVIIGGIDDEGTG 120
Query: 119 FICTMDSIGA------KYVGSLQKIL 138
+ D +G+ + G+ Q +L
Sbjct: 121 AVYGFDPVGSYERETCRAAGAAQSLL 146
>gi|194872539|ref|XP_001973034.1| GG15866 [Drosophila erecta]
gi|190654817|gb|EDV52060.1| GG15866 [Drosophila erecta]
Length = 235
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 63/123 (51%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG ++VA+ G + IA+D RL + ++ K+ + +G +G D+ +L
Sbjct: 26 ESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSHQTVLGSTGCWADTLSLT 85
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ R + Y+ R M E A ++S +Y +RF PY+ ++AG+ +E K + + D
Sbjct: 86 GSMKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEGKGVVYSYD 145
Query: 125 SIG 127
IG
Sbjct: 146 PIG 148
>gi|10121721|gb|AAG13340.1|AF266220_1 proteasome subunit beta type 1 [Gillichthys mirabilis]
Length = 181
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 59/112 (52%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D IG SG D TL +
Sbjct: 19 FNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTK 78
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDK 117
+ R K+Y+ + M A+++S +LY +RF PY+ +I GL +E K
Sbjct: 79 IIDARLKMYKHSNNKMMTCGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGK 130
>gi|71018283|ref|XP_759372.1| hypothetical protein UM03225.1 [Ustilago maydis 521]
gi|46099097|gb|EAK84330.1| hypothetical protein UM03225.1 [Ustilago maydis 521]
Length = 356
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Query: 5 EYNGSALVAMVGKNCFAIASDRR--LGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
+ NG ++ A+ G + IASD R G +QT ++ +++D+ + +G A D++
Sbjct: 101 DSNGGSIAAVCGTDFCVIASDTRQSTGYNIQTRYK--PKVFRLNDKATLATNGFAADAEA 158
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
L + R ++Y+ R M + A ++S +LY KRF PY+ ++ GL +E K + +
Sbjct: 159 LVSHVRQRLEMYRHAHGRSMPLHSIARMISTILYGKRFFPYYVYNILGGLDEEGKGAVYS 218
Query: 123 MDSIGA 128
D +G+
Sbjct: 219 FDPVGS 224
>gi|356519025|ref|XP_003528175.1| PREDICTED: uncharacterized protein LOC100798029 [Glycine max]
Length = 853
Score = 65.9 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/31 (87%), Positives = 28/31 (90%)
Query: 99 RFGPYFCQPVIAGLSDEDKPFICTMDSIGAK 129
RFGPYFCQPVIAGL DEDKPFI TMD +GAK
Sbjct: 729 RFGPYFCQPVIAGLGDEDKPFIYTMDCLGAK 759
>gi|449020004|dbj|BAM83406.1| 20S core proteasome subunit beta 6 [Cyanidioschyzon merolae strain
10D]
Length = 244
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 70/123 (56%), Gaps = 1/123 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++A+ G++ +A+D RL V + +F +I ++ D+ + +G+ D Q L++
Sbjct: 34 NGGTVLALAGRDYAIVAADTRLSVGFSIPSRNFTKIVQLTDQAVLASAGMGADRQYLHKI 93
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGL-SDEDKPFICTMDS 125
L R ++Y+ + +++M A L+S LY +RF P + V+ G+ ++ + F+ D+
Sbjct: 94 LRSRLEIYRYQHQKEMSLGAIAQLLSNTLYSRRFFPIYAFNVLGGIDANTGEGFVFGYDA 153
Query: 126 IGA 128
IG+
Sbjct: 154 IGS 156
>gi|392868|gb|AAC46465.1| proteasome subunit [Drosophila melanogaster]
Length = 235
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 63/123 (51%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG ++VA+ G + IA+D RL + ++ K+ + +G +G D+ +L
Sbjct: 26 ESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADTLSLT 85
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ R + Y+ R M E A ++S +Y +RF PY+ ++AG+ +E K + + D
Sbjct: 86 GSIKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEGKGVVYSYD 145
Query: 125 SIG 127
IG
Sbjct: 146 PIG 148
>gi|289742321|gb|ADD19908.1| 20S proteasome regulatory subunit beta type PSMB1/PRE7 [Glossina
morsitans morsitans]
Length = 236
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 63/123 (51%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG ++VA+ G + IA+D RL + ++ ++ +G +G D+ L
Sbjct: 26 ESNGGSIVAIAGNDFAVIAADSRLSSGYTIHTRNENKLFQLSSNAVLGSTGCWCDTLALT 85
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ R ++Y+ + M + A ++S L+Y +RF PY+ V+AGL+ E K + + D
Sbjct: 86 ALVKARMQMYEHTHSKTMSTDATAQMLSILMYNRRFFPYYVSNVLAGLNSEGKGVVYSYD 145
Query: 125 SIG 127
IG
Sbjct: 146 PIG 148
>gi|157119738|ref|XP_001659482.1| proteasome subunit beta type [Aedes aegypti]
gi|108875198|gb|EAT39423.1| AAEL008770-PA [Aedes aegypti]
Length = 231
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 63/123 (51%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG ++VA+ G + I +D RL ++ ++ DR + +G D+ L
Sbjct: 24 ESNGGSVVAIAGDDFAVIGADTRLSSGYSIHTRTQNKLFRMSDRTVLASTGCWCDTLALT 83
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ R ++Y+ + +++M A ++S L+Y +RF PY+ V+AGL + K I + D
Sbjct: 84 SLVKVRMQMYKDQHQKNMTTPAVAQMLSILMYNRRFFPYYVSNVLAGLDADGKGVIYSYD 143
Query: 125 SIG 127
IG
Sbjct: 144 PIG 146
>gi|195495065|ref|XP_002095108.1| GE22205 [Drosophila yakuba]
gi|194181209|gb|EDW94820.1| GE22205 [Drosophila yakuba]
Length = 235
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 63/123 (51%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG ++VA+ G + IA+D RL + ++ K+ + +G +G D+ +L
Sbjct: 26 ESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSTGCWADTLSLT 85
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ R + Y+ R M E A ++S +Y +RF PY+ ++AG+ +E K + + D
Sbjct: 86 GSMKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEGKGVVYSYD 145
Query: 125 SIG 127
IG
Sbjct: 146 PIG 148
>gi|223993685|ref|XP_002286526.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977841|gb|EED96167.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 280
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 64/124 (51%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E+NG +A+ G + +A+D RL + ++ + ++ + ++ +G +G TD L
Sbjct: 74 EFNGGTTLAISGPDYAVVAADTRLSSGYEILSRNVSKLHPLTEKCVLGSAGCKTDVDQLR 133
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
L + K+Y + M + A ++ LY KRF PY+ V+AG+ E K + + D
Sbjct: 134 SVLDIKMKVYAHNHRKAMATPSVAQMLGNTLYMKRFFPYYSFNVLAGIDSEGKGAVYSYD 193
Query: 125 SIGA 128
+IG+
Sbjct: 194 AIGS 197
>gi|195328187|ref|XP_002030798.1| GM24382 [Drosophila sechellia]
gi|195590871|ref|XP_002085168.1| GD12455 [Drosophila simulans]
gi|194119741|gb|EDW41784.1| GM24382 [Drosophila sechellia]
gi|194197177|gb|EDX10753.1| GD12455 [Drosophila simulans]
Length = 235
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 63/123 (51%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG ++VA+ G + IA+D RL + ++ K+ + +G +G D+ +L
Sbjct: 26 ESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSTGCWADTLSLT 85
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ R + Y+ R M E A ++S +Y +RF PY+ ++AG+ +E K + + D
Sbjct: 86 GSMKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEGKGVVYSYD 145
Query: 125 SIG 127
IG
Sbjct: 146 PIG 148
>gi|352682834|ref|YP_004893358.1| proteasome subunit beta [Thermoproteus tenax Kra 1]
gi|350275633|emb|CCC82280.1| proteasome, beta subunit [Thermoproteus tenax Kra 1]
Length = 204
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 71/125 (56%), Gaps = 2/125 (1%)
Query: 5 EYN-GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTL 63
EYN G+ V + K+ +A+++R+ ++++ +++ ++DR+ I +G+ D QTL
Sbjct: 4 EYNVGATAVGIRAKDGVVLAAEKRITYGFYSLSSSGKKVFIVNDRMAIASAGVIADMQTL 63
Query: 64 YQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTM 123
+ L K+Y+L +R A L+S +++ +R+ P+ + ++ G DE+ P + +
Sbjct: 64 AKILRVNAKMYELDAKRKPSVAAMAKLLSIIMFNRRWMPFIAEVLVGGY-DEEGPHVFVL 122
Query: 124 DSIGA 128
D +G+
Sbjct: 123 DPVGS 127
>gi|302348749|ref|YP_003816387.1| proteasome beta subunit [Acidilobus saccharovorans 345-15]
gi|302329161|gb|ADL19356.1| Proteasome beta subunit [Acidilobus saccharovorans 345-15]
Length = 207
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 67/128 (52%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
MS E V + K+ +A+D+R+ ++ + +++ I++R I +SGL D
Sbjct: 1 MSAYEIEQGTAVGVKAKDGVVLATDKRMAYGSFVMSRNAKKVFLINNRAAIAMSGLYADV 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
+ + L K Y+L EER M + L+S +LY + P+ + ++ G+ + +P I
Sbjct: 61 GAILRYLTAESKYYELTEERTMSLYAISKLLSGILYSYKMLPFIIEALVGGIDRDGQPKI 120
Query: 121 CTMDSIGA 128
T+DS+G+
Sbjct: 121 YTLDSLGS 128
>gi|397610458|gb|EJK60845.1| hypothetical protein THAOC_18741 [Thalassiosira oceanica]
Length = 283
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 6/143 (4%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E+NG +A+ G + +A+D RL + ++ + ++ + R +G +G TD L
Sbjct: 77 EFNGGTTLAISGPDYAVVAADTRLSSGYEILSRNVSKLHPLTGRCVLGSAGCKTDVDQLR 136
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
L + K+Y + M + A ++ LY KRF PY+ V+AG+ E K + + D
Sbjct: 137 SVLDIKMKVYAHNHRKPMATPSVAQMLGNTLYYKRFFPYYSFNVLAGIDSEGKGAVYSYD 196
Query: 125 SIGA------KYVGSLQKILLLL 141
+IG+ GS Q L+ L
Sbjct: 197 AIGSFERTPFSASGSGQSFLIPL 219
>gi|17737605|ref|NP_524115.1| proteasome 26kD subunit [Drosophila melanogaster]
gi|12643277|sp|P40304.2|PSB1_DROME RecName: Full=Proteasome subunit beta type-1; AltName:
Full=Proteasome 26 kDa subunit; Flags: Precursor
gi|7294080|gb|AAF49435.1| proteasome 26kD subunit [Drosophila melanogaster]
gi|15291705|gb|AAK93121.1| LD24159p [Drosophila melanogaster]
gi|220947536|gb|ACL86311.1| Pros26-PA [synthetic construct]
Length = 235
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 63/123 (51%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG ++VA+ G + IA+D RL + ++ K+ + +G +G D+ +L
Sbjct: 26 ESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADTLSLT 85
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ R + Y+ R M E A ++S +Y +RF PY+ ++AG+ +E K + + D
Sbjct: 86 GSIKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEGKGVVYSYD 145
Query: 125 SIG 127
IG
Sbjct: 146 PIG 148
>gi|198424168|ref|XP_002121356.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 229
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 67/142 (47%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G + +ASD RL D + ++ + SG DS TL +
Sbjct: 24 FNGGNILAVAGGDFAVVASDTRLSQGFMIHTRDHPKAVQLTANTVLAQSGFEGDSLTLKK 83
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R +Y+ + A+++S +LY KRF PY+ ++AGL +E K + + D
Sbjct: 84 HVQMRIGMYEHNHGKTPSTSAIAAMISKMLYYKRFFPYYVYNIVAGLDNEGKGCVYSYDP 143
Query: 126 IGAKYVGSLQKILLLLELLESL 147
+G+ + ELL+ L
Sbjct: 144 VGSYEREQYRAAGAANELLQPL 165
>gi|254574222|ref|XP_002494220.1| Beta 6 subunit of the 20S proteasome [Komagataella pastoris GS115]
gi|238034019|emb|CAY72041.1| Beta 6 subunit of the 20S proteasome [Komagataella pastoris GS115]
gi|328353959|emb|CCA40356.1| 20S proteasome subunit beta 6 [Komagataella pastoris CBS 7435]
Length = 243
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + G++ +A D R + ++ + D L I +G A D L +R
Sbjct: 30 NGGTVLGIAGEDFAILAGDTRHTTGYSINSRYEPKVFSVGDELLITANGFAADGDALVKR 89
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
+ K Y ++++ ++ A + LLY KRF PY+ +IAGL +E K + + D +
Sbjct: 90 FRNQLKWYHFDHKKNLTIKSAARFIQHLLYGKRFFPYYVHTIIAGLDEEGKGAVYSFDPV 149
Query: 127 GA 128
G+
Sbjct: 150 GS 151
>gi|238606166|ref|XP_002396644.1| hypothetical protein MPER_03076 [Moniliophthora perniciosa FA553]
gi|215469594|gb|EEB97574.1| hypothetical protein MPER_03076 [Moniliophthora perniciosa FA553]
Length = 59
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTL 63
EYNG +++AMVGK+C AIA D RLG Q I+++FQ+I + DR+++GL ATD TL
Sbjct: 2 EYNGGSVIAMVGKDCVAIACDLRLGNQALGISSNFQKIFPVSDRIYLGLPA-ATDVTTL 59
>gi|388507486|gb|AFK41809.1| unknown [Medicago truncatula]
Length = 158
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 56/113 (49%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG + VA+ G + IA+D R+ + D+ +IS + ++ + SG D + L
Sbjct: 12 DNNGGSCVAIAGSDYCVIAADTRMSTGYNILTRDYSKISHLAEKCVMAPSGFQADVKALQ 71
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDK 117
+ L RH YQ + + M A L+S LY KRF PY+ L+ +++
Sbjct: 72 KVLSARHLTYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSSMCWVALTVKER 124
>gi|158293754|ref|XP_315096.4| AGAP004991-PA [Anopheles gambiae str. PEST]
gi|157016597|gb|EAA10482.4| AGAP004991-PA [Anopheles gambiae str. PEST]
Length = 231
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 64/123 (52%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG ++VA+ G++ I +D RL ++ ++ D+ + +G D+ L
Sbjct: 24 ESNGGSVVAIAGEDFAVIGADTRLSSGYSIHTRTQNKLFRLSDKTVLASTGCWCDTLALT 83
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ R ++Y+ + +++M A ++S L+Y +RF PY+ V+AGL + K + + D
Sbjct: 84 SLVKVRMQMYKDQHQKNMSTPAVAQMLSILMYNRRFFPYYVSNVLAGLDQDGKGVVYSYD 143
Query: 125 SIG 127
IG
Sbjct: 144 PIG 146
>gi|313231365|emb|CBY08480.1| unnamed protein product [Oikopleura dioica]
Length = 242
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 62/123 (50%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
++G +A+ G + +ASD RLG + R S + D IG G D++ L Q
Sbjct: 36 WHGGTCLAIAGDDFVLMASDTRLGEHGGIYTRELNRNSPVTDHCAIGQCGFQGDARVLLQ 95
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ + ++Y+ + A+++S +LY KRF PY+ ++AGL + K + + D
Sbjct: 96 NVKAKIRIYEHQHMEQPTAPAIAAMLSTMLYYKRFFPYYVYNIVAGLDGDGKGSVFSYDP 155
Query: 126 IGA 128
+G+
Sbjct: 156 VGS 158
>gi|147919477|ref|YP_686783.1| 20S proteasome, beta subunit [Methanocella arvoryzae MRE50]
gi|121685330|sp|Q0W2D6.1|PSB_UNCMA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|110622179|emb|CAJ37457.1| 20S proteasome, beta subunit [Methanocella arvoryzae MRE50]
Length = 208
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
M +Y G+ + ++ +A++RR + + D Q+I +I D + ++G D
Sbjct: 2 MEDKQYKGTTTIGIICDQGVVLATERRATMGNFIASRDAQKIYRITDNAAMTIAGSVGDG 61
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
Q L + L KL++LR M + L+S +L E R+ PY+ Q +I GL D+ P I
Sbjct: 62 QRLARILQVEAKLFELRRHGSMSINALSMLLSNILAEMRYAPYYVQVLIGGL-DKAGPKI 120
Query: 121 CTMDSIGAK 129
++D +G +
Sbjct: 121 YSLDPLGGR 129
>gi|343426757|emb|CBQ70285.1| probable PRE7-20S proteasome subunit(beta6) [Sporisorium reilianum
SRZ2]
Length = 291
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Query: 5 EYNGSALVAMVGKNCFAIASDRR--LGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
+ NG ++ A+ G + IASD R G +QT ++ +++D+ + +G A D++
Sbjct: 36 DSNGGSIAAVCGTDFCVIASDTRQSTGYNIQTRYK--PKVFRLNDKATLATNGFAADAEA 93
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
L + R ++Y+ R M + A ++S +LY KRF PY+ ++ GL +E K + +
Sbjct: 94 LVSHVQQRLEMYRHAHGRSMPLHSIARMLSTILYGKRFFPYYVYNILGGLDEEGKGAVYS 153
Query: 123 MDSIGA 128
D +G+
Sbjct: 154 FDPVGS 159
>gi|330791448|ref|XP_003283805.1| hypothetical protein DICPUDRAFT_45058 [Dictyostelium purpureum]
gi|325086304|gb|EGC39696.1| hypothetical protein DICPUDRAFT_45058 [Dictyostelium purpureum]
Length = 236
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 76/147 (51%), Gaps = 9/147 (6%)
Query: 7 NGSALVAMVGKNCFAIASDRRL---GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTL 63
NG ++A+ GK+ IA D R+ G +QT + ++ ++ ++ + SG+ D+ L
Sbjct: 29 NGGTVMAVAGKDYCVIAGDTRMSDGGYGIQT--RHYTKVFQLTNKCVLATSGMQADTIAL 86
Query: 64 YQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTM 123
+RL + YQ + M A +S LY KRF PY+ ++AG+ ++ + +I T
Sbjct: 87 QKRLKLMLETYQKEHGKPMSTPAIAQFLSNTLYYKRFFPYYTFNLVAGVDEKGEGWIWTY 146
Query: 124 DSIGA----KYVGSLQKILLLLELLES 146
D++G+ KY L++ LL++
Sbjct: 147 DAVGSHERVKYSSQGSGNQLVIPLLDN 173
>gi|427787323|gb|JAA59113.1| Putative 20s proteasome regulatory subunit beta type psmb1/pre7
[Rhipicephalus pulchellus]
Length = 232
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++VA+ G + IASD RL + ++ K+ ++ +G +G D T +
Sbjct: 27 NGGSIVAVAGDDFAVIASDSRLSSGYHIHTREQSKLFKLSNQCVLGSTGCWCDILTFTRF 86
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R K+Y + M A L+ +LY KRF PY+ ++AGL +E K I D +
Sbjct: 87 LEARMKMYLHEHHKLMSTPAVAQLIVTMLYNKRFFPYYISNILAGLDEEGKGCIYCYDPV 146
Query: 127 G 127
G
Sbjct: 147 G 147
>gi|383320533|ref|YP_005381374.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanocella conradii HZ254]
gi|379321903|gb|AFD00856.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanocella conradii HZ254]
Length = 207
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 67/129 (51%), Gaps = 1/129 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
M +Y G+ V ++ N A++RR + + D Q+I K+ D + + ++G D
Sbjct: 1 MDDKQYKGTTTVGIICNNGVVFATERRATMGTFIASRDAQKIYKLTDNIAMTIAGSVGDG 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
Q L + L KL++LR M + L+S +L E ++ P++ Q +I G+ D+ P I
Sbjct: 61 QRLARILQVEAKLFELRRHGPMSINALSMLLSNILAETKYMPFYVQVLIGGV-DKSGPRI 119
Query: 121 CTMDSIGAK 129
++D +G +
Sbjct: 120 YSLDPLGGR 128
>gi|290986448|ref|XP_002675936.1| predicted protein [Naegleria gruberi]
gi|284089535|gb|EFC43192.1| predicted protein [Naegleria gruberi]
Length = 223
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 69/126 (54%), Gaps = 4/126 (3%)
Query: 5 EYNGSALVAMVGKNCFAIASDRR--LGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
E NG +A+ G + +A+D R LG +QT + ++ K+ D+ I +G+ +D+ T
Sbjct: 16 EDNGGTTLAIPGPDYVIVAADTRMSLGYSIQTRKS--TKLCKLTDKCVIASAGMQSDAAT 73
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
L++ L R Y+ + + M ++S +LY +RF PY+ ++AGL + K + +
Sbjct: 74 LHKVLKMRLVEYEHQHGKPMSVVAVGQMLSNMLYNRRFFPYYTFNLVAGLDTDGKGIVFS 133
Query: 123 MDSIGA 128
D+IG+
Sbjct: 134 YDAIGS 139
>gi|399219027|emb|CCF75914.1| unnamed protein product [Babesia microti strain RI]
Length = 214
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 65/121 (53%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++A + + +D RL V + +++++ DR+ IG +G+ D+ L+++
Sbjct: 10 NGGTVIAAAKDDFAVLVADTRLSVGYSIHSRRVSKVTRLTDRIIIGTAGMNADTIALHKQ 69
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L + +YQ + + + L+S +LY KRF PY+ ++ G+ + + ++ T D+I
Sbjct: 70 LEAQVTIYQNKHHENPDIHCISQLLSVILYGKRFFPYYTFNLLVGIDMKGQAYVFTYDAI 129
Query: 127 G 127
G
Sbjct: 130 G 130
>gi|353238864|emb|CCA70796.1| probable PRE7-20S proteasome subunit(beta6) [Piriformospora indica
DSM 11827]
Length = 250
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
NG ++A+ G++ IA D R G +QT ++ ++ D+ + ++G A D
Sbjct: 14 NGGTILAIAGQDFTVIAGDTRQSEGYNIQTRYA--PKVFRLTDKAVLAVNGFAADGNMFV 71
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
Q++ R + YQ ++M A L+ +LY KRF PY+ ++ G+ D+ + + D
Sbjct: 72 QKVQQRLEWYQHAHNKEMPLRAIARLIQTMLYAKRFFPYYVYNILGGIEDDGSGAVYSFD 131
Query: 125 SIGA 128
+G+
Sbjct: 132 PVGS 135
>gi|300120426|emb|CBK19980.2| unnamed protein product [Blastocystis hominis]
Length = 322
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 62/122 (50%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG + A+ GK+ IA+D RL + ++ + R+ + +G +G TD TL +
Sbjct: 2 NGGTVAAIAGKDYVIIAADTRLTQGYEILSRNVSRLHPLTSVCVLGNAGCWTDMTTLLRT 61
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L + K Y+ ++ A+L+S LY +RF P + V+ GL + + I + D+I
Sbjct: 62 LEYDIKEYKYNHREEISTSAVAALLSNTLYNRRFFPIYAFNVLCGLDENGQGVIYSYDAI 121
Query: 127 GA 128
G+
Sbjct: 122 GS 123
>gi|300120472|emb|CBK20026.2| unnamed protein product [Blastocystis hominis]
Length = 322
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 62/122 (50%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG + A+ GK+ IA+D RL + ++ + R+ + +G +G TD TL +
Sbjct: 2 NGGTVAAIAGKDYVIIAADTRLTQGYEILSRNVSRLHPLTSVCVLGNAGCWTDMTTLLRT 61
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L + K Y+ ++ A+L+S LY +RF P + V+ GL + + I + D+I
Sbjct: 62 LEYDIKEYKYNHREEISTSAVAALLSNTLYNRRFFPIYAFNVLCGLDENGQGVIYSYDAI 121
Query: 127 GA 128
G+
Sbjct: 122 GS 123
>gi|171185380|ref|YP_001794299.1| proteasome endopeptidase complex protein [Pyrobaculum neutrophilum
V24Sta]
gi|302595731|sp|B1YDJ0.1|PSB2_THENV RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|170934592|gb|ACB39853.1| Proteasome endopeptidase complex [Pyrobaculum neutrophilum V24Sta]
Length = 203
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 69/121 (57%), Gaps = 1/121 (0%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + K+ +A+++R+ T++T +++ ++D+L I +G+ D Q L + L
Sbjct: 8 GATAVGIRAKDGVVLAAEKRVSYGFYTLSTAGKKVFIVNDKLAIASAGIIADMQALAKIL 67
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+ Y+L ++ + A L+S +++ +RF P++ + ++ G+ DE+ P + MD +G
Sbjct: 68 KLNARSYELEVKKKPTVKAMAKLLSVVMFSRRFMPFYAEVLVGGV-DEEGPHLIVMDPLG 126
Query: 128 A 128
+
Sbjct: 127 S 127
>gi|390364342|ref|XP_001187732.2| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1-like
[Strongylocentrotus purpuratus]
Length = 229
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 8/125 (6%)
Query: 6 YNGSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTL 63
+NG ++AM G + IASD RL G + T R S + RL + + +D +L
Sbjct: 27 FNGGTIMAMAGDDYAIIASDTRLSEGFSIHT------RDSPKNYRLXVISIHICSDWPSL 80
Query: 64 YQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTM 123
+ L R K+Y+ + M A+++S +LY +RF PY+ ++AGL +E K + +
Sbjct: 81 TKVLTARLKMYEHEHHKKMSTTAIAAMLSTILYYRRFFPYYTYNILAGLDEEGKGCVYSF 140
Query: 124 DSIGA 128
D +G+
Sbjct: 141 DPVGS 145
>gi|164657003|ref|XP_001729628.1| hypothetical protein MGL_3172 [Malassezia globosa CBS 7966]
gi|159103521|gb|EDP42414.1| hypothetical protein MGL_3172 [Malassezia globosa CBS 7966]
Length = 257
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 4/124 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
NG +++A+ G + IA D R G +QT ++ ++ D+ + +G A D++ L
Sbjct: 13 NGGSIMAIHGDDYCVIAGDTRQSEGYNIQTRYK--PKVFRLTDKATLATNGFAADAEALV 70
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
R+ R ++YQ R M A ++S +LY KRF PY+ ++ G+ +E + + D
Sbjct: 71 ARVKTRLEMYQHTHGRSMPLHAIARMLSTILYSKRFFPYYVYNILGGIDEEGRGAVYGYD 130
Query: 125 SIGA 128
+G+
Sbjct: 131 PVGS 134
>gi|126644014|ref|XP_001388169.1| proteasome subunit beta type 1 [Cryptosporidium parvum Iowa II]
gi|126117246|gb|EAZ51346.1| proteasome subunit beta type 1, putative [Cryptosporidium parvum
Iowa II]
Length = 246
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 63/122 (51%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG + VA+ G + IA+D RL + + + ++ ++ + SG+ D L +
Sbjct: 43 NGGSCVAVAGDDFVVIAADTRLSKMYRIASRSVSKTCQLTNKCILACSGMLADINALRKT 102
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L+ + KLY+ + A L+S +LY KRF PY+ +++GL ++ K + D++
Sbjct: 103 LLAKVKLYEFEHNKTPSINAIAQLLSCILYSKRFFPYYSFCLLSGLDEQGKGVVYGYDAV 162
Query: 127 GA 128
G+
Sbjct: 163 GS 164
>gi|412993855|emb|CCO14366.1| predicted protein [Bathycoccus prasinos]
Length = 243
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 63/124 (50%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG ++A+ G++ A+D R+ + + ++ ++ + + +G D+ TL
Sbjct: 32 DNNGGTVMAVAGEDYVICAADTRMSTGYSIMTRQYTKVDEMSPKTLMASAGFMADAATLK 91
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L R YQ + + FA ++S LY +RF PY+ ++AGL E K + T D
Sbjct: 92 KLLKGRCDQYQFANNKPIGCVAFAQMLSNTLYMRRFFPYYAFNIVAGLDAEGKGAVFTYD 151
Query: 125 SIGA 128
++G+
Sbjct: 152 AVGS 155
>gi|195135135|ref|XP_002011990.1| GI16713 [Drosophila mojavensis]
gi|193918254|gb|EDW17121.1| GI16713 [Drosophila mojavensis]
Length = 235
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 65/123 (52%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG ++VA+ G + IA+D RL + D ++ ++ + +G +G D+ +L
Sbjct: 26 ESNGGSIVAIAGDDFVVIAADTRLSSGYSIHSRDQSKLFEMSPKTVLGSTGCWCDTLSLT 85
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ R ++Y+ + M + A ++S ++Y +RF PY+ ++AGL + K + + D
Sbjct: 86 GLVKVRMQMYEHTHLKTMTTDAVAQMLSIVMYNRRFFPYYVSNILAGLDKDGKGAVYSYD 145
Query: 125 SIG 127
IG
Sbjct: 146 PIG 148
>gi|242023933|ref|XP_002432385.1| proteasome subunit beta type, putative [Pediculus humanus corporis]
gi|212517808|gb|EEB19647.1| proteasome subunit beta type, putative [Pediculus humanus corporis]
Length = 219
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++VA+ G++ I SD RL + ++ K+ D +G SG D+ L +
Sbjct: 14 NGGSIVAIAGEDFAVIGSDTRLSSNYSIFTRNQSKLFKLSDTTVLGCSGCWCDTLQLTKV 73
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
+ + ++Y + M + ++S LLY KRF PY V+AGL D+ K + + D I
Sbjct: 74 VRAQMQMYFHDNNKVMVTPAVSQMLSTLLYYKRFMPYLVYNVLAGLDDQGKGCVYSYDPI 133
Query: 127 G 127
G
Sbjct: 134 G 134
>gi|336121951|ref|YP_004576726.1| proteasome endopeptidase complex subunit beta [Methanothermococcus
okinawensis IH1]
gi|334856472|gb|AEH06948.1| proteasome endopeptidase complex, beta subunit [Methanothermococcus
okinawensis IH1]
Length = 220
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 66/121 (54%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ + MV K+ +A+D+R + + +++ KI D + + ++G D+Q+L + +
Sbjct: 13 GTTTIGMVCKDGVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQSLVRMI 72
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
K+Y++R +M P + A+L+S +L+ R P+ Q +I G + P + ++D +G
Sbjct: 73 SAETKIYKMRTGNNMPPHSCATLLSNILHGNRHFPFLTQLIIGGYDNLHGPKLFSLDPVG 132
Query: 128 A 128
Sbjct: 133 G 133
>gi|403216524|emb|CCK71021.1| hypothetical protein KNAG_0F03590 [Kazachstania naganishii CBS
8797]
Length = 248
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + G++ +A D R + ++ + D + I +G A DS L +R
Sbjct: 36 NGGTILGIAGEDFAVLAGDTRHTTDYSINSRSESKVFDVGDGIVISANGFAADSTALVKR 95
Query: 67 LVFRHKLYQLRE-ERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
K Y E E+ + A + LLY KRF PY+ +IAGL +E K + + D
Sbjct: 96 FRNSLKWYHFNENEKRLSLSAAARNIQHLLYGKRFFPYYVHTIIAGLDEEGKGAVYSFDP 155
Query: 126 IGA 128
+G+
Sbjct: 156 VGS 158
>gi|119719309|ref|YP_919804.1| proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
gi|302595733|sp|A1RX71.1|PSB2_THEPD RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|119524429|gb|ABL77801.1| Proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
Length = 204
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Query: 18 NCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLR 77
+ +A+++R+ L ++ +++ +I D++ + +GL D QTL + + +LY+L
Sbjct: 15 DGVVLAAEKRVSYGLYLMSKSGKKVYRILDKMGMASAGLMADMQTLARIVEAEMRLYELD 74
Query: 78 EERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGA 128
K T A L+S +LYE+R PY+ + V+ GL DE+ + ++D IGA
Sbjct: 75 SNISPKVWTVAKLLSYILYERRLFPYYAEIVVGGL-DEEGSHLYSLDPIGA 124
>gi|440796014|gb|ELR17123.1| proteasome subunit protein, putative [Acanthamoeba castellanii str.
Neff]
Length = 236
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 73/144 (50%), Gaps = 4/144 (2%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +A+ GK+ +A+D RL + + +++ K+ D+ I +G+ D L++
Sbjct: 30 NGGTTLALHGKDFCVVAADTRLSTGYSIHSREARKVLKLTDKCVIATAGMQADQLALHKL 89
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R + Y+ + + M A +++ +LY KRF P++ V+ G+ D + + D++
Sbjct: 90 LQTRLQWYEHQHRKPMSTPAIAQMLATILYSKRFFPFYTFNVLGGVDDNGVGCVYSYDAV 149
Query: 127 GA----KYVGSLQKILLLLELLES 146
G+ KY S L+ LL++
Sbjct: 150 GSFERVKYSSSGTGNQLVQPLLDN 173
>gi|384485678|gb|EIE77858.1| hypothetical protein RO3G_02562 [Rhizopus delemar RA 99-880]
Length = 232
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 61/122 (50%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG VA+ GK+ +A+D R + + K+ + I ++G D TL +
Sbjct: 26 NGGTSVAIAGKDFCIVAADTRQSTGYNINSRFAPKAYKLSETSVIAMNGFHADGLTLKKV 85
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R K Y+ ++DM A ++S LY+KRF PY+ V+ G+ +E K + D+I
Sbjct: 86 LDQRLKWYKFSHDKDMSCTALAQMLSITLYQKRFFPYYSFCVLGGVDEEGKGAVYCYDAI 145
Query: 127 GA 128
G+
Sbjct: 146 GS 147
>gi|406602407|emb|CCH46023.1| Proteasome subunit beta type-1-A [Wickerhamomyces ciferrii]
Length = 242
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 55/122 (45%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + G++ +A D R V + ++ D + + +G + D L R
Sbjct: 29 NGGTILGIAGEDFSVLAGDTRHTVGYSINSRYEPKVFDAGDNIVVSANGFSADGNALVSR 88
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
K Y + + + A + +LY KRF PY+ +IAGL DE K + + D +
Sbjct: 89 FKNHLKWYHFNNNKKISLSSAARFIQHMLYGKRFFPYYVHTIIAGLDDEGKGAVYSFDPV 148
Query: 127 GA 128
G+
Sbjct: 149 GS 150
>gi|385303180|gb|EIF47271.1| proteasome component c5 [Dekkera bruxellensis AWRI1499]
Length = 243
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + G++ +A D R V + ++ + D L + +G + D L +
Sbjct: 30 NGGTILGIAGEDFAVLAGDTRQTVGYSIDSRYEPKVHNVGDNLLLSANGFSADGVQLVKV 89
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
+ K Y +DM ++ A L+ LLY KR PY+ ++AGL E K I + D +
Sbjct: 90 FQNQLKWYHFDNNKDMSVDSAARLIQHLLYGKRMFPYYVSTILAGLDKEGKGAIYSFDPV 149
Query: 127 GA 128
G+
Sbjct: 150 GS 151
>gi|384497220|gb|EIE87711.1| hypothetical protein RO3G_12422 [Rhizopus delemar RA 99-880]
Length = 232
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 61/122 (50%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG VA+ GK+ +A+D R + + K+ + I ++G D TL +
Sbjct: 26 NGGTSVAIAGKDFCIVAADTRQSTGYNINSRFSPKAYKLSETSVIAMNGFHADGLTLKKV 85
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R K Y+ ++DM A ++S LY+KRF PY+ V+ G+ +E K + D+I
Sbjct: 86 LDQRLKWYKFSHDKDMSCTALAQMLSITLYQKRFFPYYSFCVLGGVDEEGKGAVYCYDAI 145
Query: 127 GA 128
G+
Sbjct: 146 GS 147
>gi|323445273|gb|EGB01969.1| hypothetical protein AURANDRAFT_9896 [Aureococcus anophagefferens]
Length = 150
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 62/124 (50%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
++NG +A+ G + +A+D R+ + ++ ++ + +G TD L
Sbjct: 5 DFNGGTTLAISGADFAVVAADTRMSTGYSIMTRKMSKLHQLGPNTVLAAAGCQTDVVCLV 64
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
L R K+Y+ + ++M + A ++ LY KRF PY+ V+AG+ E K + + D
Sbjct: 65 DVLKTRQKMYKHQTGKNMTTTSIAQMLGNTLYYKRFFPYYAFNVLAGVDKEGKGCVYSYD 124
Query: 125 SIGA 128
+IG+
Sbjct: 125 AIGS 128
>gi|195441689|ref|XP_002068635.1| GK20318 [Drosophila willistoni]
gi|194164720|gb|EDW79621.1| GK20318 [Drosophila willistoni]
Length = 233
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 64/123 (52%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG ++VA+ G++ IA+D RL ++ K+ + +G +G +D+ +L
Sbjct: 24 ESNGGSIVAIAGEDFAVIAADTRLSSGYNIHTRTQNKLFKLSENSVLGSTGCWSDTLSLT 83
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
L R ++Y+ + M + A ++S +Y +RF PY+ ++AG+ + K + + D
Sbjct: 84 GLLKVRMQMYEHTHLKVMSTDALAQMLSITMYNRRFFPYYVSNILAGVDKDGKGVVYSYD 143
Query: 125 SIG 127
IG
Sbjct: 144 PIG 146
>gi|321260412|ref|XP_003194926.1| 20S proteasome beta-type subunit; Pre7p [Cryptococcus gattii WM276]
gi|317461398|gb|ADV23139.1| 20S proteasome beta-type subunit, putative; Pre7p [Cryptococcus
gattii WM276]
Length = 272
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 66/124 (53%), Gaps = 4/124 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
NG +++A+ GK+ IA D R G +QT +++ ++ D++ + +G A D
Sbjct: 30 NGGSILAIAGKDFSIIAGDTRQSEGYSIQTRYA--RKVWQLTDKVVLATNGFAADGNNFV 87
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+R+ R + Y+ + M ++ A ++ +LY KRF PY+ ++ G+ ++ + + D
Sbjct: 88 KRVKQRLEWYEHAHNKPMSLKSIARMIQTMLYGKRFFPYYVYNILGGIEEDGSGAVYSFD 147
Query: 125 SIGA 128
+G+
Sbjct: 148 PVGS 151
>gi|405121415|gb|AFR96184.1| proteasome subunit [Cryptococcus neoformans var. grubii H99]
Length = 272
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 66/124 (53%), Gaps = 4/124 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
NG +++A+ GK+ IA D R G +QT +++ ++ D++ + +G A D
Sbjct: 30 NGGSILAIAGKDFSIIAGDTRQSEGYSIQTRYA--RKVWQLTDKVVLATNGFAADGNNFV 87
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+R+ R + Y+ + M ++ A ++ +LY KRF PY+ ++ G+ ++ + + D
Sbjct: 88 KRVKQRLEWYEHAHNKSMGLKSIARMIQTMLYGKRFFPYYVYNILGGIEEDGSGAVYSFD 147
Query: 125 SIGA 128
+G+
Sbjct: 148 PVGS 151
>gi|170035625|ref|XP_001845669.1| proteasome subunit beta type 1 [Culex quinquefasciatus]
gi|167877642|gb|EDS41025.1| proteasome subunit beta type 1 [Culex quinquefasciatus]
Length = 231
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 63/123 (51%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG ++VA+ G + I +D RL ++ ++ + + +G D+ L
Sbjct: 24 ESNGGSVVAIAGDDFAVIGADTRLSSGYSIHTRTQNKLFRLSEGTVLASTGCWCDTLALT 83
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ R ++Y+ + +++M A ++S L+Y +RF PY+ V+AGL +E + + + D
Sbjct: 84 SLVKVRMQMYKDQHQKNMTTPAVAQMLSILMYNRRFFPYYVSNVLAGLDEEGRGVVYSYD 143
Query: 125 SIG 127
IG
Sbjct: 144 PIG 146
>gi|221117643|ref|XP_002165958.1| PREDICTED: proteasome subunit beta type-1-A-like [Hydra
magnipapillata]
Length = 226
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G +L+A+ G++ IASD RL + + + ++ D +G G D TL + +
Sbjct: 22 GGSLLAIAGEDFAVIASDTRLSEGFLIHSRNIPKTYQLTDTTILGSCGFHGDVLTLTKNI 81
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
R +Y+ + M + A ++S LY KRF PY+ +IAGL + K I + D +G
Sbjct: 82 KTRLVMYEHEHFKTMSCSSIAQMLSTTLYYKRFFPYYTYNIIAGLDSDGKGAIYSFDPVG 141
Query: 128 A 128
+
Sbjct: 142 S 142
>gi|377834609|ref|XP_003689507.1| PREDICTED: proteasome subunit beta type-1-like [Mus musculus]
Length = 276
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D+ IG SG D TL +
Sbjct: 34 FNGGPVLAIAGEDFSIVASDTRLSEEFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 93
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+ + M+ A+++S + +RF PY+ +I GL +E K + + D
Sbjct: 94 IIETRLKM-----NKAMRTGAVAAMLSTIPCSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 148
Query: 126 IGA 128
+G+
Sbjct: 149 VGS 151
>gi|261402297|ref|YP_003246521.1| proteasome endopeptidase complex subunit beta [Methanocaldococcus
vulcanius M7]
gi|302595760|sp|C9REN7.1|PSB_METVM RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|261369290|gb|ACX72039.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
vulcanius M7]
Length = 223
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 65/121 (53%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V ++ + +A+D+R + + +++ KI D + + ++G D+Q + + L
Sbjct: 6 GTTTVGLICDDAVILATDKRASMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRAL 65
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+ +LY++R +++ P A+L+S +L+ R P+ Q +I G D P + ++D +G
Sbjct: 66 IAEARLYKMRTGKNISPRACATLLSNILHSSRMFPFLTQIIIGGYDLTDGPKLFSLDPLG 125
Query: 128 A 128
Sbjct: 126 G 126
>gi|327311727|ref|YP_004338624.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
gi|326948206|gb|AEA13312.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
Length = 204
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 68/125 (54%), Gaps = 2/125 (1%)
Query: 5 EYN-GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTL 63
EY G+ V + K+ +A+++R+ ++++ +++ ++DR+ + +G+ D QT+
Sbjct: 4 EYGIGATAVGIKAKDGVVLAAEKRITYGFYSLSSSGKKVYVVNDRMALASAGVIADMQTI 63
Query: 64 YQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTM 123
+ L K+Y+L R A L+S +++ +R P+ + ++ G DE+ P I +
Sbjct: 64 AKILRVNAKMYELESRRKPSIAAMAKLLSVIMFNRRIMPFIAEVLVGGY-DEEGPHIFVL 122
Query: 124 DSIGA 128
D +G+
Sbjct: 123 DPVGS 127
>gi|390365759|ref|XP_001177076.2| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1-like
[Strongylocentrotus purpuratus]
Length = 201
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%)
Query: 12 VAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRH 71
+AM G + IASD RL D + ++ D +G +G D TL + L R
Sbjct: 1 MAMAGDDYAIIASDTRLSEGFSIHTRDSPKNYQLTDGTVLGCAGFHGDVLTLTKVLTARL 60
Query: 72 KLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGA 128
K+ + + M A+++S +LY +RF PY+ ++AGL +E K + + D +G+
Sbjct: 61 KMXEHEHHKKMFTSAIAAMLSTILYYRRFFPYYTYNILAGLDEEGKGCVYSFDPVGS 117
>gi|302309124|ref|NP_986343.2| AGL324Wp [Ashbya gossypii ATCC 10895]
gi|299788212|gb|AAS54167.2| AGL324Wp [Ashbya gossypii ATCC 10895]
gi|374109588|gb|AEY98493.1| FAGL324Wp [Ashbya gossypii FDAG1]
Length = 243
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + G++ +A D R + + ++ D + I +G A D L +R
Sbjct: 30 NGGTILGIAGEDFAVLAGDTRHTTGYSINSREEPKVFDCGDNILISANGFAADGDALVKR 89
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
K Y+ + M ++ A + LLY KR PY+ +IAGL +E K + + D +
Sbjct: 90 FKNSMKWYRFDHNKKMTIKSAARSIQHLLYGKRMFPYYVHTIIAGLDEEGKGAVYSYDPV 149
Query: 127 GA 128
G+
Sbjct: 150 GS 151
>gi|209881526|ref|XP_002142201.1| proteasome subunit beta type 1 [Cryptosporidium muris RN66]
gi|209557807|gb|EEA07852.1| proteasome subunit beta type 1, putative [Cryptosporidium muris
RN66]
Length = 245
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 4/144 (2%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG + +A+ G + I SD RL + + R+ +I + + SG+ D L +
Sbjct: 41 NGGSCIALAGSDFAVIVSDTRLSQGYRIASRSVTRVFEITAKCVLSCSGMFADITALQKL 100
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
+ R K+Y+ ++ A L+S +LY KRF PY+C IAGL + D++
Sbjct: 101 IRARVKIYEFEHKKSPSIGAVAQLLSTVLYSKRFFPYYCYCAIAGLDEYGNGVAYGYDAV 160
Query: 127 GA----KYVGSLQKILLLLELLES 146
G+ KY + L+ +L++
Sbjct: 161 GSFQSGKYFANGTGSHLISSILDN 184
>gi|68065946|ref|XP_674957.1| proteasome subunit beta type 1 [Plasmodium berghei strain ANKA]
gi|56493858|emb|CAI00630.1| proteasome subunit beta type 1, putative [Plasmodium berghei]
Length = 267
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 25/149 (16%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + G N +A D RL + + +ISKI D+ IG SG+ +D +TL+
Sbjct: 38 NGGTVIGLTGNNYVILAGDTRLSLSYSIYTRNCPKISKITDKCIIGSSGMQSDIKTLHSL 97
Query: 67 L------------------VFRHKLYQLRE-----ERDMKP--ETFASLVSALLYEKRFG 101
L +F K+ Q + E P A L+ LY +RF
Sbjct: 98 LQVLLKIFLLYNYYCCNLIIFFSKILQKKIQLFYLEHSHYPSIHVIAKLLCVTLYSRRFF 157
Query: 102 PYFCQPVIAGLSDEDKPFICTMDSIGAKY 130
PY+ ++AG+ + K + + D+IG+ Y
Sbjct: 158 PYYTFNILAGIDENGKGVLYSYDAIGSYY 186
>gi|58268196|ref|XP_571254.1| hypothetical protein CNF01080 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134113318|ref|XP_774684.1| hypothetical protein CNBF3630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257328|gb|EAL20037.1| hypothetical protein CNBF3630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227489|gb|AAW43947.1| hypothetical protein CNF01080 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 272
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 66/124 (53%), Gaps = 4/124 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
NG +++A+ GK+ IA D R G +QT +++ ++ D++ + +G A D
Sbjct: 30 NGGSILAIAGKDFSIIAGDTRQSEGYSIQTRYA--RKVWQLTDKVVLATNGFAADGNNFV 87
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+R+ R + Y+ + M ++ A ++ +LY KRF PY+ ++ G+ ++ + + D
Sbjct: 88 KRVKQRLEWYEHAHNKAMGLKSIARMIQTMLYGKRFFPYYVYNILGGIEEDGSGAVYSFD 147
Query: 125 SIGA 128
+G+
Sbjct: 148 PVGS 151
>gi|309271453|ref|XP_003085312.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Mus musculus]
Length = 730
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL + D + K+ D+ IG SG D TL +
Sbjct: 34 FNGGPVLAIAGEDFSIVASDTRLSEEFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 93
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ R K+ + M+ A+++S + +RF PY+ +I GL +E K + + D
Sbjct: 94 IIETRLKM-----NKAMRTGAVAAMLSTIPCSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 148
Query: 126 IGA 128
+G+
Sbjct: 149 VGS 151
>gi|374326224|ref|YP_005084424.1| proteasome subunit beta [Pyrobaculum sp. 1860]
gi|356641493|gb|AET32172.1| proteasome, beta subunit [Pyrobaculum sp. 1860]
Length = 203
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 65/121 (53%), Gaps = 1/121 (0%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + +A+++R+ T+++ +++ + D+L I +G+ D Q L + L
Sbjct: 8 GATAVGIKTAGGVVLAAEKRVSYGFYTLSSSGKKVFVVDDKLAIASAGIIADMQALAKIL 67
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
K Y+L ++ A L+S +++ +RF P+F + ++ G+ DE+ P + MD +G
Sbjct: 68 KLNAKSYELEMKKKPSVHAMAKLLSVVMFSRRFMPFFAEVLVGGV-DEEGPHLIVMDPLG 126
Query: 128 A 128
+
Sbjct: 127 S 127
>gi|242247122|ref|NP_001156136.1| proteasome subunit beta type-like [Acyrthosiphon pisum]
gi|239799300|dbj|BAH70578.1| ACYPI003417 [Acyrthosiphon pisum]
Length = 222
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 62/121 (51%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++VA+ GK+ +ASD RL ++ ++ D+ +G +G D+ +L
Sbjct: 21 NGGSIVAISGKDFAIVASDTRLSEGYMIYTRKQSKLFQLSDKSVLGCTGCWCDTLSLTNI 80
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
+ + K Y M+P + A L+S LLY +RF PY+ V+AGL + + + D +
Sbjct: 81 IQSQLKSYLYDHNTIMQPNSIAQLLSTLLYSRRFFPYYVYNVLAGLDINGEGCLYSYDPV 140
Query: 127 G 127
G
Sbjct: 141 G 141
>gi|403224082|dbj|BAM42212.1| proteasome subunit [Theileria orientalis strain Shintoku]
Length = 220
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 4/146 (2%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++A KN IA+D RL ++ ++ K+ D+ +G SG+ D L
Sbjct: 16 NGGTVIAATWKNYAVIAADTRLSLRYLIHTRYSTKLLKLTDKCILGTSGMQADMLALQSV 75
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
+ + ++Y+ ++ A L+S +LY +RF PY+ ++ GL + C D++
Sbjct: 76 IERQIEMYRFTHHKEPTFGAIAQLLSTVLYGRRFFPYYTFNILCGLDENGNGVTCNYDAV 135
Query: 127 G----AKYVGSLQKILLLLELLESLF 148
G KY L++ +L++L
Sbjct: 136 GNYNYEKYAAQGTSSSLVVPILDNLL 161
>gi|330038504|ref|XP_003239615.1| 26S proteasome SU B6 [Cryptomonas paramecium]
gi|327206539|gb|AEA38717.1| 26S proteasome SU B6 [Cryptomonas paramecium]
Length = 245
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 68/123 (55%), Gaps = 2/123 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQ 65
N ++++ +N + SD R + +I T FQ RI KI +++ + +G+ D+ +
Sbjct: 40 NSGTIISIANQNYCVVVSDTRY-LNGFSIPTRFQTRIFKISEKIILASAGMFADAFFFQK 98
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ K Y+ ++ + E+ A +S+LLY KRF PY+ V++GL + DK + + DS
Sbjct: 99 KTKTSIKDYEYGIKKAISVESCAFYISSLLYSKRFFPYYVFNVLSGLDENDKGSVYSFDS 158
Query: 126 IGA 128
+G+
Sbjct: 159 VGS 161
>gi|72391616|ref|XP_846102.1| proteasome beta 6 subunit [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175642|gb|AAX69774.1| proteasome beta 6 subunit [Trypanosoma brucei]
gi|70802638|gb|AAZ12543.1| proteasome beta 6 subunit [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 258
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 6/126 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQL-QTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
NG + A+ G N + +D RL +D ++ K+ DR+F+ SG+ D L Q
Sbjct: 51 NGGTIAAIAGSNYVVLGADTRLNGDFCIHTRSDTSKLFKLTDRIFLASSGMQADRLQLQQ 110
Query: 66 RLVFRHKLYQLREERDMKPET--FASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC-T 122
L +R + YQ + P T A L S +LY++RF PY+ +I G+ DE +C +
Sbjct: 111 MLKYRIQWYQYNNGGKV-PSTKAIAKLTSTMLYQRRFFPYYTFNMIVGI-DEKGAGVCYS 168
Query: 123 MDSIGA 128
D +G+
Sbjct: 169 YDPVGS 174
>gi|350525853|ref|YP_002582771.2| proteasome subunit beta [Thermococcus sp. AM4]
gi|345650672|gb|EEB74119.2| Proteasome subunit beta [Thermococcus sp. AM4]
Length = 194
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 75/146 (51%), Gaps = 6/146 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ V +V ++ +A+DRR + + + ++ ++ D L I +GL D +L +
Sbjct: 2 KGTTTVGVVCRDGVVLAADRRATLGNMVTSKEVTKVFQVDDHLAIAGAGLVGDILSLVRL 61
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L KLY+ R R+M + A+LVS +L+ R+ PYF +I G + +P + ++D+
Sbjct: 62 LRAEAKLYRARVGREMSVKAMATLVSNVLHGSRYLPYFAWFLIGGY--DVRPRLYSIDAA 119
Query: 127 GA----KYVGSLQKILLLLELLESLF 148
G +++ + + L LLE F
Sbjct: 120 GGVTEERFIAAGSGMEFALALLEENF 145
>gi|46397057|sp|Q9U794.1|PSB1_TRYBB RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S
proteasome subunit beta-6
gi|6224687|gb|AAF05905.1|AF148124_1 20S proteasome beta 6 subunit [Trypanosoma brucei brucei]
gi|261329654|emb|CBH12636.1| 20S proteasome beta 6 subunit, putative [Trypanosoma brucei
gambiense DAL972]
Length = 258
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 6/126 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQL-QTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
NG + A+ G N + +D RL +D ++ K+ DR+F+ SG+ D L Q
Sbjct: 51 NGGTIAAIAGSNYVVLGADTRLNGDFCIHTRSDTSKLFKLTDRIFLASSGMQADRLQLQQ 110
Query: 66 RLVFRHKLYQLREERDMKPET--FASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC-T 122
L +R + YQ + P T A L S +LY++RF PY+ +I G+ DE +C +
Sbjct: 111 MLKYRIQWYQYNNGGKV-PSTKAIAKLTSTMLYQRRFFPYYTFNMIVGI-DEKGAGVCYS 168
Query: 123 MDSIGA 128
D +G+
Sbjct: 169 YDPVGS 174
>gi|210075667|ref|XP_502489.2| YALI0D06523p [Yarrowia lipolytica]
gi|199425772|emb|CAG80677.2| YALI0D06523p [Yarrowia lipolytica CLIB122]
Length = 248
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQ 65
NG ++ + G + +A D R +I + +Q ++ + D + + +G + D L +
Sbjct: 43 NGGTVLGIAGDDFALLAGDTR-NTTGYSINSRYQPKVFDVGDNILVTANGFSADGDALIE 101
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ +LY + + +K ++ A + +LY KRF PY+ +IAGL +E K + + D
Sbjct: 102 NIKQHVELYHYQNNKPLKVQSCARAIQHMLYNKRFFPYYVHTIIAGLDEEGKGAVYSYDP 161
Query: 126 IGA 128
+G+
Sbjct: 162 VGS 164
>gi|444321340|ref|XP_004181326.1| hypothetical protein TBLA_0F02680 [Tetrapisispora blattae CBS 6284]
gi|387514370|emb|CCH61807.1| hypothetical protein TBLA_0F02680 [Tetrapisispora blattae CBS 6284]
Length = 241
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 63/124 (50%), Gaps = 3/124 (2%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQ 65
NG ++ + G++ +A D R + +I + F+ ++ D + I +G A D + L Q
Sbjct: 27 NGGTILGIAGEDFAVLAGDTR-NITDYSINSRFEPKVFDCGDNIVISANGFAADGEALVQ 85
Query: 66 RLVFRHKLYQL-REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
R K Y ++ + ++ A + LLY KRF PY+ +IAGL +E K + + D
Sbjct: 86 RFKNSIKWYHFDHNDKKLTMKSAARNIQHLLYGKRFFPYYVHTIIAGLDEEGKGAVYSFD 145
Query: 125 SIGA 128
+G+
Sbjct: 146 PVGS 149
>gi|320163476|gb|EFW40375.1| proteasome subunit beta type-1 [Capsaspora owczarzaki ATCC 30864]
Length = 238
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 59/122 (48%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VA+ G+N +ASD RL + + + D+ + G D TL +
Sbjct: 32 NGGTVVAVAGENFAVVASDTRLSEYYGIHTRNCPKTFVLSDKTVLASCGFHGDVLTLTKN 91
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
+ R + Y+ + E+ M A ++S LY +RF P++ VI GL + K + + D +
Sbjct: 92 IFTRLRKYEHQHEKTMATHAIAQMLSNTLYYRRFFPFYTYNVIGGLDESGKGAVYSYDPV 151
Query: 127 GA 128
G+
Sbjct: 152 GS 153
>gi|296109858|ref|YP_003616807.1| proteasome endopeptidase complex, beta subunit [methanocaldococcus
infernus ME]
gi|295434672|gb|ADG13843.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
infernus ME]
Length = 205
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 66/124 (53%), Gaps = 1/124 (0%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E G+ + ++ K+ +A+D+R + + ++I KI D L + ++G D+Q+L
Sbjct: 2 EMKGTTTIGLICKDAVILAADKRASLGNLIADKNAKKIYKIDDNLALTIAGSVGDAQSLV 61
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L KLY++R + M P +L+S +L+ R+ P+ Q ++ G DE + ++D
Sbjct: 62 RYLTAEAKLYRMRTGKLMSPLACTTLLSNILHSSRYFPFLVQMIVGGF-DEKGFKLYSLD 120
Query: 125 SIGA 128
+G
Sbjct: 121 PLGG 124
>gi|42600873|gb|AAS21213.1| proteasome subunit beta type 3 [Sus scrofa]
Length = 41
Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/41 (60%), Positives = 31/41 (75%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQR 41
MSI YNG A++AM GKNC AIA+DRR G+Q Q + TD Q+
Sbjct: 1 MSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDLQK 41
>gi|428182497|gb|EKX51358.1| 20S proteasome subunit beta type 1 [Guillardia theta CCMP2712]
Length = 230
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 72/145 (49%), Gaps = 4/145 (2%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +A+ G + IA+D RL + ++ + +++++ + I SG D TL +
Sbjct: 25 NGGTCLALAGADFCIIAADSRLSLGYSILSRNTPKVAQLTTKTCIASSGCNADMVTLQKY 84
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L F+ ++Y + ++M A +++ LY +RF PY+ ++ GL + + + D+I
Sbjct: 85 LKFKIQMYLHQHGKEMSTPAVAQMLATTLYHRRFFPYYTFNIVGGLDQNGEGCVFSYDAI 144
Query: 127 GA----KYVGSLQKILLLLELLESL 147
G KY S L+ L++L
Sbjct: 145 GCFERLKYTVSGSGHALIEPFLDNL 169
>gi|301108459|ref|XP_002903311.1| proteasome subunit beta, putative [Phytophthora infestans T30-4]
gi|262097683|gb|EEY55735.1| proteasome subunit beta, putative [Phytophthora infestans T30-4]
Length = 247
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
++NG ++A+ G++ +A D RL ++ D ++ ++ +G G D L
Sbjct: 41 DFNGGTVLAIAGEDFVVVAGDTRLSTGYSILSRDESKLHELTPTTVLGCPGSHNDIIQLR 100
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
L R ++YQ E M + L+ LY +RF PY+ ++ G+ + K + T D
Sbjct: 101 GVLSIRAQMYQHDNETSMTSSAMSQLLMNTLYSRRFFPYYAFCILCGIDENGKGVVYTYD 160
Query: 125 SIGA 128
+IG+
Sbjct: 161 AIGS 164
>gi|397575659|gb|EJK49816.1| hypothetical protein THAOC_31273 [Thalassiosira oceanica]
Length = 362
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 16/125 (12%)
Query: 4 TEYNGSALVAMVGKNCFAIASDRRLGVQLQTI----ATDFQRISKIH---DRLFIGLSGL 56
T++NG +++AM G N AIA D R G+ QT+ +D IH + +GL
Sbjct: 84 TKFNGGSVLAMAGSNSVAIAVDTRFGLGFQTVHSLGDSDEGNPRIIHLPNSNTLMAWTGL 143
Query: 57 ATDSQTLYQRLV------FRHKL---YQLREERDMKPETFASLVSALLYEKRFGPYFCQP 107
D + + L FR++ + + R P++ A L+S LLY++R PY+ +P
Sbjct: 144 YGDGLSFSEELNMIMGRQFRNEQILSFPNTKRRITGPKSIAMLMSHLLYQRRNAPYYVEP 203
Query: 108 VIAGL 112
V+ GL
Sbjct: 204 VVVGL 208
>gi|328868192|gb|EGG16572.1| proteasome subunit beta type 1 [Dictyostelium fasciculatum]
Length = 236
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 65/125 (52%), Gaps = 5/125 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRL---GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTL 63
NG ++A+ G N +A D R+ G +QT + ++ K+ D+ I SG+ D+ L
Sbjct: 29 NGGTVLAVAGSNYCIVAGDTRMSDGGYGIQT--RHYTKVFKLTDKCVIATSGMQADTIAL 86
Query: 64 YQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTM 123
+RL + + Y+ + M A +S LY KRF P++ ++AG+ ++ + T
Sbjct: 87 RKRLDTQLRQYERDHGKSMSTPAIAQFLSNTLYHKRFFPFYTFNLVAGVDEDGIGCVWTY 146
Query: 124 DSIGA 128
D++G+
Sbjct: 147 DAVGS 151
>gi|409040369|gb|EKM49857.1| hypothetical protein PHACADRAFT_265596 [Phanerochaete carnosa
HHB-10118-sp]
Length = 252
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
NG ++A+ G + +A D R G +QT ++ K+ DR + ++G A D
Sbjct: 20 NGGTILAIAGADFSVVAGDTRQSEGYSIQTRYA--PKVHKLTDRAVLAVNGFAADGNMFV 77
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+++ R + Y+ +DM A L+ +LY +RF PY+ ++ G+ ++ I + D
Sbjct: 78 KKVKQRLEWYRHAHAKDMPLRAIARLIQTMLYGQRFFPYYVYNILGGIEEDGTGAIYSFD 137
Query: 125 SIGA 128
+G+
Sbjct: 138 PVGS 141
>gi|299743502|ref|XP_001835816.2| proteasome subunit [Coprinopsis cinerea okayama7#130]
gi|298405683|gb|EAU85881.2| proteasome subunit [Coprinopsis cinerea okayama7#130]
Length = 253
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
NG ++A+ G + IA D R G +QT ++ K+ D+ + ++G A D
Sbjct: 20 NGGTILAVAGADFTVIAGDTRQSEGYNIQTRYAP--KVFKLTDKAVLAVNGFAADGNMFV 77
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+++ R + Y+ +DM + A L+ +LY +RF PY+ ++ G+ ++ + + D
Sbjct: 78 KKVKQRLEWYRHAHAKDMPIRSIARLIQTMLYARRFFPYYVYNILGGIEEDGTGAVYSFD 137
Query: 125 SIGA 128
+G+
Sbjct: 138 PVGS 141
>gi|379005617|ref|YP_005261289.1| proteasome endopeptidase complex, archaeal, beta subunit
[Pyrobaculum oguniense TE7]
gi|375161070|gb|AFA40682.1| proteasome endopeptidase complex, archaeal, beta subunit
[Pyrobaculum oguniense TE7]
Length = 203
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 67/121 (55%), Gaps = 1/121 (0%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + K+ +A+++R+ T+++ +++ I D+L I +G+ D Q+L + +
Sbjct: 8 GATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGKKVFVIDDKLAIASAGIIADMQSLARIV 67
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
K Y+L + + A L+S +++ +R+ P+F + ++ G+ DE+ + MD +G
Sbjct: 68 KINAKAYELETRKKPTVRSMAKLLSVIMFSRRYMPFFAEVLVGGV-DEEGNHLIVMDPLG 126
Query: 128 A 128
+
Sbjct: 127 S 127
>gi|145592407|ref|YP_001154409.1| proteasome endopeptidase complex protein [Pyrobaculum arsenaticum
DSM 13514]
gi|302595720|sp|A4WMZ0.1|PSB2_PYRAR RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|145284175|gb|ABP51757.1| Proteasome endopeptidase complex [Pyrobaculum arsenaticum DSM
13514]
Length = 203
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 67/121 (55%), Gaps = 1/121 (0%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + K+ +A+++R+ T+++ +++ I D+L I +G+ D Q+L + +
Sbjct: 8 GATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGRKVFVIDDKLAIASAGIIADMQSLARIV 67
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
K Y+L + + A L+S +++ +R+ P+F + ++ G+ DE+ + MD +G
Sbjct: 68 KINAKAYELETRKKPTVRSMAKLLSVIMFSRRYMPFFAEVLVGGV-DEEGSHLIVMDPLG 126
Query: 128 A 128
+
Sbjct: 127 S 127
>gi|11498092|ref|NP_069317.1| proteasome subunit beta [Archaeoglobus fulgidus DSM 4304]
gi|17380266|sp|Q9P996.1|PSB_ARCFU RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|2650155|gb|AAB90757.1| proteasome, subunit beta (psmB) [Archaeoglobus fulgidus DSM 4304]
Length = 213
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Query: 1 MSITE---YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLA 57
MS+ E Y G+ V +V K+ +A+++R + + ++I +I DR+ + +G
Sbjct: 1 MSMIEEKIYKGTTTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSV 60
Query: 58 TDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDK 117
D+Q L + + LY++R ER A+L S LL R+ PY Q +I G+ E K
Sbjct: 61 GDAQFLARIIKIEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGK 120
Query: 118 PFICTMDSIGA 128
I ++D IG
Sbjct: 121 S-IYSIDPIGG 130
>gi|50308397|ref|XP_454200.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643335|emb|CAG99287.1| KLLA0E05633p [Kluyveromyces lactis]
Length = 240
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 56/122 (45%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + G++ +A D R + ++ + D + I +G A D + L +R
Sbjct: 27 NGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFECEDNILISANGFAADGEALVKR 86
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
Y + + ++ A + LLY KR PY+ +IAGL +E K + + D +
Sbjct: 87 FKNSQMWYHFNHNKKLTIKSAARNIQHLLYGKRMFPYYVHTIIAGLDEEGKGAVYSFDPV 146
Query: 127 GA 128
G+
Sbjct: 147 GS 148
>gi|294940012|ref|XP_002782634.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
gi|239894486|gb|EER14429.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
Length = 241
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 61/122 (50%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +A+ G + +++D R+ + +I+K+ +R I SG+ D TL++
Sbjct: 36 NGGTCIAVPGADYCVVSTDNRVSKGYSIATRNGSKITKLTERCVITTSGMLADQITLHKV 95
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R Y R+ A ++S +LY KRF PY+ +IAG+ + K + D+I
Sbjct: 96 LKNRVARYVHEHRREPTVGAVAQMLSNILYYKRFFPYYTFNMIAGIDENGKGKVYGYDAI 155
Query: 127 GA 128
G+
Sbjct: 156 GS 157
>gi|111226971|ref|XP_001134620.1| proteasome subunit beta type 1 [Dictyostelium discoideum AX4]
gi|74926737|sp|Q86A21.1|PSB1_DICDI RecName: Full=Proteasome subunit beta type-1
gi|90971293|gb|EAS66954.1| proteasome subunit beta type 1 [Dictyostelium discoideum AX4]
Length = 236
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 75/147 (51%), Gaps = 9/147 (6%)
Query: 7 NGSALVAMVGKNCFAIASDRRL---GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTL 63
NG ++A+ GK+ IA D R+ G +QT + +I ++ + + SG+ D+ L
Sbjct: 29 NGGTVLAVAGKDYCVIAGDTRMSDGGYGIQT--RKYTKIFQLTKKCVLATSGMQADTIAL 86
Query: 64 YQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTM 123
+RL + ++ + M A +S LY KRF PY+ ++AG+ ++ + +I T
Sbjct: 87 QKRLKSMLESFEKEHGKPMSTPAIAQFLSNTLYYKRFFPYYTFNLVAGVDEQGEGWIWTY 146
Query: 124 DSIGA----KYVGSLQKILLLLELLES 146
D++G+ KY L++ LL++
Sbjct: 147 DAVGSHERVKYSSQGSGNQLVIPLLDN 173
>gi|240103778|ref|YP_002960087.1| peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
gammatolerans EJ3]
gi|302595756|sp|C5A7L1.1|PSB1_THEGJ RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|239911332|gb|ACS34223.1| Peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
gammatolerans EJ3]
Length = 201
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 76/151 (50%), Gaps = 6/151 (3%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
S + G+ V +V ++ +A+DRR + + + ++ +I D L I +GL D
Sbjct: 4 SPSAMKGTTTVGVVCRDGVVLAADRRATLGNMVTSKEVTKVFQIDDHLAIAGAGLVGDIL 63
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
+L + L KLY+ + R+M + A+LVS +L+ R PYF +I G + KP +
Sbjct: 64 SLVRLLRAEAKLYRAKVGREMSVKALATLVSNVLHGSRHLPYFAWFLIGGY--DVKPRLY 121
Query: 122 TMDSIGA----KYVGSLQKILLLLELLESLF 148
++D+ G +++ + + L LLE F
Sbjct: 122 SIDAAGGVTEERFIAAGSGMEFALALLEENF 152
>gi|294955484|ref|XP_002788528.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
gi|239904069|gb|EER20324.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
Length = 241
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 61/122 (50%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +A+ G + +++D R+ + +I+K+ +R I SG+ D TL++
Sbjct: 36 NGGTCIAVPGADYCVVSTDNRVSKGYSIATRNGSKITKLTERCVITTSGMLADQITLHKV 95
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R Y R+ A ++S +LY KRF PY+ +IAG+ + K + D+I
Sbjct: 96 LKNRVARYVHEHRREPTVGAVAQMLSNILYYKRFFPYYTFNMIAGIDENGKGKVYGYDAI 155
Query: 127 GA 128
G+
Sbjct: 156 GS 157
>gi|402077428|gb|EJT72777.1| proteasome component C5 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 264
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDR--------LFIGLSGLAT 58
NG + +A+ G + +A D R+ + ++ +I L + + G A
Sbjct: 40 NGGSTLAIAGADFAIMAGDTRMASGYSINTRFYPKVFRIGGTTSDQKDATLVLSVVGFAA 99
Query: 59 DSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKP 118
D + L +RL K+Y+ R + M + A +S +LY+KRF PY+ ++AGL +E K
Sbjct: 100 DGEALKERLDAICKMYRYRHGKPMSAKACAKRLSTILYQKRFFPYYTHAILAGLDEEGKG 159
Query: 119 FICTMDSIGA 128
+ + D +G+
Sbjct: 160 AVYSYDPVGS 169
>gi|403374976|gb|EJY87456.1| Proteasome subunit beta type [Oxytricha trifallax]
Length = 255
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 65/122 (53%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
N VA+ G++ +ASD R+ ++ ++ R +++ D+ I G+ D +TL++
Sbjct: 51 NQGTTVAIAGEDFVLVASDTRISQGFNILSREYSRTTRLTDQCVITSGGMVADIETLHKL 110
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L+ + K YQ + ++ E+ A L+ LY +RF P++ ++ G+ + + D+I
Sbjct: 111 LISKVKTYQRQFKKTPTVESLAQLLGNTLYGRRFMPFYAFNLLCGIDVNGQGTVYGYDAI 170
Query: 127 GA 128
G+
Sbjct: 171 GS 172
>gi|336369489|gb|EGN97830.1| hypothetical protein SERLA73DRAFT_182590 [Serpula lacrymans var.
lacrymans S7.3]
gi|336382272|gb|EGO23422.1| hypothetical protein SERLADRAFT_469320 [Serpula lacrymans var.
lacrymans S7.9]
Length = 253
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
NG ++A+ G + IA D R G +QT ++ ++ DR + ++G A D
Sbjct: 21 NGGTILAIAGADFSVIAGDTRQSEGYSIQTRYA--PKVFRLTDRAVLAVNGFAADGNMFV 78
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+++ R + Y+ +DM A L+ +LY +RF PY+ ++ G+ ++ + + D
Sbjct: 79 KKVKQRLEWYRHAHSKDMPLRAIARLIQTMLYARRFFPYYVYNILGGIEEDGTGAVYSFD 138
Query: 125 SIGA 128
+G+
Sbjct: 139 PVGS 142
>gi|392592203|gb|EIW81530.1| 20S proteasome subunit [Coniophora puteana RWD-64-598 SS2]
Length = 257
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
NG ++A+ G + IA D R G +QT ++ ++ DR + ++G A D
Sbjct: 25 NGGTILAIAGADFSVIAGDTRQSEGYNIQTRYA--PKVFRLTDRAVLAVNGFAADGNMFV 82
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+++ R + Y+ +DM A L+ +LY +RF PY+ ++ G+ ++ + + D
Sbjct: 83 KKVKQRLEWYRHAHGKDMPLRAIARLIQTMLYARRFFPYYVYNILGGIEEDGTGAVYSFD 142
Query: 125 SIGA 128
+G+
Sbjct: 143 PVGS 146
>gi|284161559|ref|YP_003400182.1| Proteasome endopeptidase complex [Archaeoglobus profundus DSM 5631]
gi|302595818|sp|D2RGT4.1|PSB_ARCPA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|284011556|gb|ADB57509.1| Proteasome endopeptidase complex [Archaeoglobus profundus DSM 5631]
Length = 215
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 74/132 (56%), Gaps = 5/132 (3%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
Y G+ V +V K+ +A+++R + + ++I +I DR+ + +G D+Q L +
Sbjct: 10 YKGTTTVGLVCKDGVVLATEKRATMGNFIASRRAKKIYRIADRVAMTTAGAVGDAQFLAR 69
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ KLY++R+E + A+L+S +L R+ PYF Q ++ G+ D+ P I ++D
Sbjct: 70 LISVEIKLYEIRKEEKPTVKAIATLLSNILNSVRWFPYFVQLLVGGV-DKRGPSIYSIDL 128
Query: 126 IGAKYVGSLQKI 137
+G G++++I
Sbjct: 129 LG----GAIEEI 136
>gi|402222920|gb|EJU02985.1| N-terminal nucleophile aminohydrolase [Dacryopinax sp. DJM-731 SS1]
Length = 259
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
NG ++A+ GK+ IA D R G +QT ++ K+ DR + ++G D T
Sbjct: 25 NGGTILAIAGKDFSVIAGDTRQTEGYSIQTRYA--PKVFKLTDRAVLAVNGFQADCSTFV 82
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+++ R + Y+ + M + A ++ +LY KRF PY+ ++ G+ ++ + + D
Sbjct: 83 KKVKQRIEWYRHAHSKQMPLKAIARMIQGMLYGKRFFPYYTYNILGGIEEDGTGAVYSFD 142
Query: 125 SIGA 128
+G+
Sbjct: 143 PVGS 146
>gi|17223778|gb|AAL18244.1| proteasomal subunit beta type III [Mus musculus]
Length = 48
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/41 (60%), Positives = 33/41 (80%)
Query: 23 ASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTL 63
A+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD QT+
Sbjct: 8 AADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTV 48
>gi|367020378|ref|XP_003659474.1| hypothetical protein MYCTH_2296573 [Myceliophthora thermophila ATCC
42464]
gi|347006741|gb|AEO54229.1| hypothetical protein MYCTH_2296573 [Myceliophthora thermophila ATCC
42464]
Length = 265
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 22/137 (16%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLF---------------I 51
NG + +A+ G + +A D RL ++ + S+ H +LF +
Sbjct: 41 NGGSTLAIAGADFTVMAGDTRL-------SSGYSINSRQHPKLFKIGGTTADQKDATIVL 93
Query: 52 GLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAG 111
+ G A D + L +RL K+Y+ R + M + A +S +LY+KRF PY+ ++ G
Sbjct: 94 SVVGFAADGEALKERLDAICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYYTHAILGG 153
Query: 112 LSDEDKPFICTMDSIGA 128
L +E K + + D +G+
Sbjct: 154 LDEEGKGAVYSYDPVGS 170
>gi|408404298|ref|YP_006862281.1| proteasome subunit beta [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408364894|gb|AFU58624.1| proteasome, subunit beta [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 201
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ +V + N +A+++R+ + + ++ + D + +G+ D Q L +++
Sbjct: 8 GATVVGISYNNGVILAAEKRVSFGNFVVNKNIKKTFSVTDHVGAACAGMVADMQVLVRQV 67
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
K+ +L RD+ P + A L+S +++E+R+ P Q ++ G++ KP I T+D +G
Sbjct: 68 EALAKIRKLETRRDVAPNSIAKLMSVIMFERRYFPLLTQVIVGGIN--TKPEIYTLDPLG 125
Query: 128 A 128
+
Sbjct: 126 S 126
>gi|401415060|ref|XP_003872026.1| putative 20S proteasome beta 6 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488248|emb|CBZ23493.1| putative 20S proteasome beta 6 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 247
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 7/151 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRL-GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
NG A+ GK +A D RL G D +I ++ ++ +G+ D L Q
Sbjct: 40 NGGTTAAIAGKGFVILAGDTRLNGDYCLHCRHDQSKIFQLTPYTYMASNGMQADRVQLQQ 99
Query: 66 RLVFRHKLYQLREERDMKP-ETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
L +R K YQ + P + A L+S +LY +RF PY+ +I GL +E + D
Sbjct: 100 MLKYRVKWYQYNNGGKVPPTKAIAQLMSTMLYHRRFFPYYTFNMIVGLDEEGNGVCYSYD 159
Query: 125 SIGAKYVGSLQKILLLLELLESLFMVPVRQC 155
+ VGS + L + F+ PV C
Sbjct: 160 A-----VGSTEPFLYGTRGSAASFLEPVLDC 185
>gi|254586379|ref|XP_002498757.1| ZYRO0G17842p [Zygosaccharomyces rouxii]
gi|238941651|emb|CAR29824.1| ZYRO0G17842p [Zygosaccharomyces rouxii]
Length = 244
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + G++ +A D R + ++ D + I +G A D + L +R
Sbjct: 30 NGGTVLGIAGEDFAVLAGDTRHTTDYSINSRYESKVFDCGDNIVITANGYAADGEALVKR 89
Query: 67 LVFRHKLYQL-REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
K Y ++ + + A + LLY KRF PY+ Q +IAGL +E K + + D
Sbjct: 90 FKNSVKWYHFDHNDKKLSLNSAARNIQHLLYGKRFFPYYVQTIIAGLDEEGKGAVYSFDP 149
Query: 126 IGA 128
+G+
Sbjct: 150 VGS 152
>gi|237838257|ref|XP_002368426.1| proteasome subunit beta type 1, putative [Toxoplasma gondii ME49]
gi|211966090|gb|EEB01286.1| proteasome subunit beta type 1, putative [Toxoplasma gondii ME49]
Length = 359
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
Query: 7 NGSALVAMVGKNCFAIA-SDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
NG +V + G++ FA+A D RL + +I+K+ D++ + SG+ D TL+
Sbjct: 155 NGGTVVCVAGED-FAVAVGDTRLSTGFSIYSRRQSKITKLTDKVVLATSGMEADKTTLHN 213
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
L R + Y + A L+S +LY +RF P++ V+ G+ + K + D+
Sbjct: 214 LLKIRIEQYTHQHRHPPSLNAIAQLLSTVLYSRRFFPFYTFNVLCGIDENGKGAVYGYDA 273
Query: 126 IGA 128
IG+
Sbjct: 274 IGS 276
>gi|50287473|ref|XP_446166.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525473|emb|CAG59090.1| unnamed protein product [Candida glabrata]
Length = 242
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + G++ +A D R + ++ D + + +G A D + L +R
Sbjct: 28 NGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFDCGDNIIMSANGFAADGEALVKR 87
Query: 67 LVFRHKLYQL-REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
K Y ++ + + A + LLY KRF PY+ +IAGL DE K + + D
Sbjct: 88 FKNSIKWYHFDHNDKKLSISSAARNIQHLLYGKRFFPYYVHTIIAGLDDEGKGAVYSFDP 147
Query: 126 IGA 128
+G+
Sbjct: 148 VGS 150
>gi|399574445|ref|ZP_10768204.1| proteasome endopeptidase complex subunit beta [Halogranum salarium
B-1]
gi|399240277|gb|EJN61202.1| proteasome endopeptidase complex subunit beta [Halogranum salarium
B-1]
Length = 241
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 64/122 (52%), Gaps = 5/122 (4%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + +A+D R + + D Q++ +IH + ++G + +Q+L + L
Sbjct: 47 GTTTVGLKTSEGVVLATDMRASMGYMVSSKDVQKVEQIHPTAALTIAGSVSAAQSLIRSL 106
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYF-CQPVIAGLSDEDKPFICTMDSI 126
LY+ R +DM + A+L++ L R G +F QP++ G+ DE+ P + +MD++
Sbjct: 107 KAETSLYETRRGQDMSMQALATLLANFL---RSGAFFVVQPILGGV-DEEGPHVYSMDAL 162
Query: 127 GA 128
G
Sbjct: 163 GG 164
>gi|238578402|ref|XP_002388706.1| hypothetical protein MPER_12245 [Moniliophthora perniciosa FA553]
gi|215450229|gb|EEB89636.1| hypothetical protein MPER_12245 [Moniliophthora perniciosa FA553]
Length = 165
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
NG ++A+ G N IA D R G +QT ++ ++ D+ + ++G A D
Sbjct: 21 NGGTILAIGGANFSVIAGDTRQSEGYSIQTRYAP--KVFRLTDKAVLAVNGFAADGNMFV 78
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+++ R + Y+ +DM A L+ +LY +RF PY+ ++ G+ ++ + + D
Sbjct: 79 KKVRQRLEWYRHAHAKDMPLRAIARLIQTMLYARRFFPYYVYNILGGIEEDGSGAVYSFD 138
Query: 125 SIGA 128
+G+
Sbjct: 139 PVGS 142
>gi|121543861|gb|ABM55595.1| putative proteasome subunit, beta type, 1 [Maconellicoccus
hirsutus]
Length = 229
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 58/121 (47%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++VA+ G + IASD RL +I K+ + +G +D T +
Sbjct: 24 NGGSIVAVGGDDFVIIASDTRLSTGYSIYTRHQSKIFKLSKISALACAGCWSDVLTFTRL 83
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
+ R ++Y ++M A ++S ++Y KRF PY+ ++ GL + +I + D I
Sbjct: 84 INARMQMYLHEHNKEMSTPALAQMLSTMMYHKRFFPYYVSNILGGLEKDGSGWIYSYDPI 143
Query: 127 G 127
G
Sbjct: 144 G 144
>gi|20094664|ref|NP_614511.1| protease subunit of the proteasome [Methanopyrus kandleri AV19]
gi|74559570|sp|Q8TW10.1|PSB_METKA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|19887825|gb|AAM02441.1| Protease subunit of the proteasome [Methanopyrus kandleri AV19]
Length = 210
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 62/123 (50%), Gaps = 3/123 (2%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V ++ +A+DRR + ++I +IHD + + +G D+Q + +
Sbjct: 10 GTTTVGILADKGVVLAADRRAVMGNLIAGKQVKKIFRIHDYIGVTTAGSVADAQKIVDLM 69
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYE--KRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+LY+LR R + A+++S +L+ K F PY Q ++ G +D+D P + +D
Sbjct: 70 RAEARLYELRHNRMISARALANMISHVLHSSLKAFRPYLVQLIVGGFNDDD-PALYNLDP 128
Query: 126 IGA 128
G+
Sbjct: 129 SGS 131
>gi|119872266|ref|YP_930273.1| proteasome endopeptidase complex protein [Pyrobaculum islandicum
DSM 4184]
gi|302595707|sp|A1RSJ8.1|PSB1_PYRIL RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|119673674|gb|ABL87930.1| Proteasome endopeptidase complex [Pyrobaculum islandicum DSM 4184]
Length = 203
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + K+ +A+++R+ T+++ +++ I+D+L I +G+ D QTL + L
Sbjct: 8 GATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGKKVFIINDKLAIASAGIIADMQTLARIL 67
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
Y+L + A L+S +++ +R P++ + ++ G+ DE+ P + MD +G
Sbjct: 68 KLNVMSYELEVRKKPTVRAMAKLLSIIMFSRRLLPFYAEVLVGGV-DEEGPHLIVMDPLG 126
Query: 128 A 128
+
Sbjct: 127 S 127
>gi|222431909|gb|ACM50881.1| 20S proteasome beta subunit F1 [Ulva fasciata]
Length = 241
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG +VA+ G + IA RL ++ + + ++ + SG D TL
Sbjct: 30 DNNGGTVVAVAGSDYCIIAGSTRLSTGFSVLSREHSSLHQLSRMCVLASSGFEGDRATLT 89
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+RL R +YQ +R + E A +S LY KRF P++ ++AGL + + + D
Sbjct: 90 KRLKSRAVMYQHSHKRPIGCEAMAQALSNELYGKRFFPFYTFNILAGLDADGTGAVYSYD 149
Query: 125 SIGA 128
++G+
Sbjct: 150 AVGS 153
>gi|162606130|ref|XP_001713580.1| 26S proteasome SU B6 [Guillardia theta]
gi|13794500|gb|AAK39875.1|AF165818_83 26S proteasome SU B6 [Guillardia theta]
Length = 239
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG ++A+ G +ASD R+ + + RI KI + +G SG+ +D L+
Sbjct: 34 QNNGGLVLAITGNKFCVMASDTRISMGYSIPSRLNLRILKISNLCLLGSSGMISDINILH 93
Query: 65 QRLVFRHKLYQLR--EERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
Q+L R+++++L+ ++ L S+LLY +RF P++ ++ G+++ K T
Sbjct: 94 QKL--RNEIFRLKYLNNTELNLNGIVYLTSSLLYSRRFFPFYTFNILTGINELGKASNYT 151
Query: 123 MDSIGA 128
D+IG+
Sbjct: 152 YDAIGS 157
>gi|348674011|gb|EGZ13830.1| hypothetical protein PHYSODRAFT_286698 [Phytophthora sojae]
Length = 247
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
++NG ++A+ G++ +A D RL ++ + ++ ++ +G G D L
Sbjct: 41 DFNGGTVLAIAGEDFVVVAGDTRLSTGYSVLSREESKLHQLTPTSVLGCPGSHNDIIQLR 100
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
L R ++YQ E M A L+ LY +RF PY+ ++ G+ + K + T D
Sbjct: 101 GVLSIRAQMYQHDNETAMSSSAMAQLLMNTLYSRRFFPYYAFCILCGIDENGKGAVYTYD 160
Query: 125 SIGA 128
+IG+
Sbjct: 161 AIGS 164
>gi|395325433|gb|EJF57855.1| proteasome subunit [Dichomitus squalens LYAD-421 SS1]
Length = 252
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
NG ++A+ G + IA D R G +QT ++ ++ DR + ++G A D
Sbjct: 20 NGGTILAIAGADFTVIAGDTRQSEGYSIQTRYA--PKVFRLTDRAVLAVNGFAADGNMFV 77
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+++ R + Y+ +DM A L+ +LY +RF PY+ ++ G+ ++ + + D
Sbjct: 78 KKVKQRLEWYRHAHAKDMPLHAIARLIQTMLYAQRFFPYYVYNILGGIEEDGSGAVYSFD 137
Query: 125 SIGA 128
+G+
Sbjct: 138 PVGS 141
>gi|390960707|ref|YP_006424541.1| proteasome subunit beta 1 [Thermococcus sp. CL1]
gi|390519015|gb|AFL94747.1| proteasome subunit beta 1 [Thermococcus sp. CL1]
Length = 203
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V +V K+ +A+DRR + ++ + ++ I D L + +G D +L + L
Sbjct: 7 GTTTVGIVCKDGVVLAADRRASLGNMVLSENVTKVFWIDDHLALAGAGSVGDILSLVRLL 66
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
KLY+ R ++M + A+L S +L+ RF PYF +IAG ++KP + ++D G
Sbjct: 67 RAEAKLYRARVGKEMSVKALATLTSNVLHGNRFMPYFGWFLIAG--HDEKPGLYSIDMAG 124
Query: 128 A 128
Sbjct: 125 G 125
>gi|294942317|ref|XP_002783482.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
gi|239895942|gb|EER15278.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
Length = 242
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +A+ G + +++D R+ + +I+K+ +R I SG+ D TL++
Sbjct: 37 NGGTCIAVPGADYCVVSTDNRVSKGYSIATRNGSKITKLTERCVITTSGMLADQITLHKV 96
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R Y R+ A ++S +LY KRF PY+ +IAG+ + + + D+I
Sbjct: 97 LKNRVARYVHEHRREPTIGAVAQMLSNILYYKRFFPYYTFNMIAGIDENGQGKVYGYDAI 156
Query: 127 GA 128
G+
Sbjct: 157 GS 158
>gi|221484304|gb|EEE22600.1| proteasome subunit beta type, putative [Toxoplasma gondii GT1]
Length = 359
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
Query: 7 NGSALVAMVGKNCFAIA-SDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
NG +V + G++ FA+A D RL + +I+K+ D++ + SG+ D TL+
Sbjct: 155 NGGTVVCVAGED-FAVAVGDTRLSTGFSIYSRRQSKITKLTDKVVLATSGMEADKTTLHN 213
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
L R + Y + A L+S +LY +RF P++ V+ G+ + K + D+
Sbjct: 214 LLKIRIEQYTHQHRHPPSLNAIAQLLSTVLYSRRFFPFYTFNVLCGIDENGKGAVYGYDA 273
Query: 126 IGA 128
IG+
Sbjct: 274 IGS 276
>gi|401402253|ref|XP_003881203.1| hypothetical protein NCLIV_042370 [Neospora caninum Liverpool]
gi|325115615|emb|CBZ51170.1| hypothetical protein NCLIV_042370 [Neospora caninum Liverpool]
Length = 246
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 66/124 (53%), Gaps = 4/124 (3%)
Query: 7 NGSALVAMVGKNCFAIA-SDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLY 64
NG +V + G++ FA+A D RL +I + FQ +I+K+ D++ + SG+ D TL+
Sbjct: 42 NGGTVVCVAGED-FAVAVGDTRLSTGF-SIYSRFQSKITKLTDKVVLATSGMQADKTTLH 99
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
L R + Y + A L+S +LY +RF P++ V+ G+ + K + D
Sbjct: 100 NLLQIRIEQYTHQHRHPPSLNAIAQLLSTMLYSRRFFPFYTFNVLCGIDENGKGAVYGYD 159
Query: 125 SIGA 128
+IG+
Sbjct: 160 AIGS 163
>gi|221505718|gb|EEE31363.1| proteasome subunit beta type, putative [Toxoplasma gondii VEG]
Length = 361
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
Query: 7 NGSALVAMVGKNCFAIA-SDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
NG +V + G++ FA+A D RL + +I+K+ D++ + SG+ D TL+
Sbjct: 157 NGGTVVCVAGED-FAVAVGDTRLSTGFSIYSRRQSKITKLTDKVVLATSGMEADKTTLHN 215
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
L R + Y + A L+S +LY +RF P++ V+ G+ + K + D+
Sbjct: 216 LLKIRIEQYTHQHRHPPSLNAIAQLLSTVLYSRRFFPFYTFNVLCGIDENGKGAVYGYDA 275
Query: 126 IGA 128
IG+
Sbjct: 276 IGS 278
>gi|392559294|gb|EIW52479.1| proteasome subunit [Trametes versicolor FP-101664 SS1]
Length = 252
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
NG ++A+ G + IA D R G +QT ++ ++ DR + ++G A D
Sbjct: 20 NGGTILAIAGADFTVIAGDTRQSEGYSIQTRYA--PKVFRLTDRAVLAVNGFAADGNMFV 77
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+++ R + Y+ +DM A L+ +LY +RF PY+ ++ G+ ++ + + D
Sbjct: 78 KKVKQRLEWYRHAHAKDMPLRAIARLIQTMLYAQRFFPYYVYNILGGIEEDGSGAVYSFD 137
Query: 125 SIGA 128
+G+
Sbjct: 138 PVGS 141
>gi|449548524|gb|EMD39490.1| hypothetical protein CERSUDRAFT_80861 [Ceriporiopsis subvermispora
B]
Length = 252
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
NG ++A+ G + IA D R G +QT ++ ++ DR + ++G A D
Sbjct: 20 NGGTILAIAGADFTVIAGDTRQSEGYSIQTRYA--PKVFRLTDRAVLAVNGFAADGNMFV 77
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+++ R + Y+ +DM A L+ +LY +RF PY+ ++ G+ ++ + + D
Sbjct: 78 KKVKQRLEWYRHAHAKDMPLRAIARLIQTMLYAQRFFPYYVYNILGGIEEDGSGAVYSFD 137
Query: 125 SIGA 128
+G+
Sbjct: 138 PVGS 141
>gi|146070767|ref|XP_001463096.1| putative 20S proteasome beta 6 subunit [Leishmania infantum JPCM5]
gi|134067179|emb|CAM65445.1| putative 20S proteasome beta 6 subunit [Leishmania infantum JPCM5]
Length = 247
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 7/151 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRL-GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
NG A+ GK+ +A D RL G D +I ++ ++ +G+ D L Q
Sbjct: 40 NGGTTAAIAGKDFVILAGDTRLNGDYCLHSRHDQSKIFQLTPYTYMASNGMQADRLQLQQ 99
Query: 66 RLVFRHKLYQLREERDMKP-ETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
L +R K YQ + P + A L+S LLY +RF PY+ ++ GL +E + D
Sbjct: 100 MLKYRVKWYQYNNGGRVPPTKAIAQLMSTLLYHRRFFPYYTFNMVVGLDEEGHGVCYSYD 159
Query: 125 SIGAKYVGSLQKILLLLELLESLFMVPVRQC 155
+ VGS + L + F+ PV C
Sbjct: 160 A-----VGSTEPFLYGTRGSAASFLEPVLDC 185
>gi|145483595|ref|XP_001427820.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145552816|ref|XP_001462083.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394903|emb|CAK60422.1| unnamed protein product [Paramecium tetraurelia]
gi|124429921|emb|CAK94710.1| unnamed protein product [Paramecium tetraurelia]
Length = 239
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
Query: 6 YNGSALVAMVG-KNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
++ S V VG +A D RL ++ D ++S++ D+ + +G D L
Sbjct: 33 HDNSGTVLAVGIPGAVIVAGDTRLSNGYNILSRDATKLSQLTDKCVLATAGQYADFIALR 92
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L R +LY+ + E ET A L+S LY +RF PY+ ++AGL + + + D
Sbjct: 93 KFLQQRLQLYEFQNEVQASTETVAHLLSRELYSRRFFPYYTFNLLAGLDENNHGVVYGYD 152
Query: 125 SIGA 128
+IG+
Sbjct: 153 AIGS 156
>gi|157864139|ref|XP_001680783.1| putative 20S proteasome beta 6 subunit [Leishmania major strain
Friedlin]
gi|68124075|emb|CAJ02057.1| putative 20S proteasome beta 6 subunit [Leishmania major strain
Friedlin]
Length = 247
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 7/151 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRL-GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
NG A+ GK+ +A D RL G D +I ++ ++ +G+ D L Q
Sbjct: 40 NGGTTAAIAGKDFVILAGDTRLNGDYCLHSRHDQSKIFQLTPYTYMASNGMQADRLQLQQ 99
Query: 66 RLVFRHKLYQLREERDMKP-ETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
L +R K YQ + P + A L+S +LY +RF PY+ ++ GL +E + D
Sbjct: 100 MLKYRVKWYQYNNGGKVPPTKAIAQLMSTMLYHRRFFPYYTFNMVVGLDEEGHGVCYSYD 159
Query: 125 SIGAKYVGSLQKILLLLELLESLFMVPVRQC 155
+ VGS + L + F+ PV C
Sbjct: 160 A-----VGSTEPFLYGTRGSAASFLEPVLDC 185
>gi|344229599|gb|EGV61484.1| N-terminal nucleophile aminohydrolase [Candida tenuis ATCC 10573]
Length = 242
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 3/124 (2%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQ 65
NG ++ + GK+ +A D R V+ +I + ++ +I + D + + +G A D + L
Sbjct: 28 NGGTVLGIAGKDFAVLAGDTRH-VEGYSINSRYEPKIFNVGDDIVMTANGFAADGKALIN 86
Query: 66 RLVFRHKLYQL-REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ K Y+ ++ ++ A + LLY KRF PY+ +IAGL DE K + + D
Sbjct: 87 SFKTQLKWYKFDHNDKRFSIQSAARYIRHLLYGKRFFPYYVSTLIAGLDDEGKGCVYSFD 146
Query: 125 SIGA 128
+G+
Sbjct: 147 PVGS 150
>gi|261201302|ref|XP_002627051.1| proteasome component C5 [Ajellomyces dermatitidis SLH14081]
gi|239592110|gb|EEQ74691.1| proteasome component C5 [Ajellomyces dermatitidis SLH14081]
gi|239611727|gb|EEQ88714.1| proteasome component C5 [Ajellomyces dermatitidis ER-3]
gi|327348257|gb|EGE77114.1| proteasome component C5 [Ajellomyces dermatitidis ATCC 18188]
Length = 266
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 7 NGSALVAMVGKNCFAIASDRRL--GVQLQT--------IATDFQRISKIHDRLFIGLSGL 56
NG + + + GK+ +A D R G + T I D + H L + + G
Sbjct: 40 NGGSTLGIAGKDYAILAGDTRSVSGYNINTRYAPKLFKIGEDNEGGEGAH--LVLSVVGF 97
Query: 57 ATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED 116
A D + L +RL K+Y+ R + M + A ++ +LY KRF PY+ ++AG+ +E
Sbjct: 98 AADGRALKERLDAIVKMYKYRHGKPMSVKACAQRLATILYSKRFFPYYVHAILAGIDEEG 157
Query: 117 KPFICTMDSIGA 128
K + + D +G+
Sbjct: 158 KGALYSYDPVGS 169
>gi|367043468|ref|XP_003652114.1| hypothetical protein THITE_2113189 [Thielavia terrestris NRRL 8126]
gi|346999376|gb|AEO65778.1| hypothetical protein THITE_2113189 [Thielavia terrestris NRRL 8126]
Length = 265
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 22/137 (16%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLF-IGLS----------- 54
NG + +A+ G + +A D RL + + S+ H +LF IG S
Sbjct: 41 NGGSTLAIAGADFTIMAGDTRL-------TSGYSINSRFHPKLFKIGGSTADQKDATLVL 93
Query: 55 ---GLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAG 111
G A D + L +RL K+Y+ R + M + A +S +LY+KRF PY+ ++ G
Sbjct: 94 SVVGFAADGEALKERLDAICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYYVHAILGG 153
Query: 112 LSDEDKPFICTMDSIGA 128
L ++ K + + D +G+
Sbjct: 154 LDEDGKGAVYSYDPVGS 170
>gi|410075834|ref|XP_003955499.1| hypothetical protein KAFR_0B00650 [Kazachstania africana CBS 2517]
gi|372462082|emb|CCF56364.1| hypothetical protein KAFR_0B00650 [Kazachstania africana CBS 2517]
Length = 241
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + G++ +A D R + ++ D + I +G A D + L +R
Sbjct: 27 NGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFDCGDNIVISANGFAADGEALVKR 86
Query: 67 LVFRHKLYQL-REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
K Y ++ + ++ A + LLY KRF PY+ +IAGL +E K + + D
Sbjct: 87 FKNSIKWYHFDHNDKKLSIKSAARNIQHLLYGKRFFPYYVHTIIAGLDEEGKGAVYSFDP 146
Query: 126 IGA 128
+G+
Sbjct: 147 VGS 149
>gi|409078890|gb|EKM79252.1| hypothetical protein AGABI1DRAFT_113835 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 256
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
NG ++A+ G + IA D R G +QT ++ ++ D+ + ++G A D
Sbjct: 23 NGGTILAIAGADFSVIAGDTRQSEGYSIQTRYA--PKVFRLTDKAVLAVNGFAADGNMFV 80
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+++ R + Y+ +DM A L+ +LY +RF PY+ ++ G+ ++ + + D
Sbjct: 81 KKVRQRLEWYRHAHAKDMPIRAIARLIQTMLYSRRFFPYYVYNILGGIEEDGTGAVYSFD 140
Query: 125 SIGA 128
+G+
Sbjct: 141 PVGS 144
>gi|336464627|gb|EGO52867.1| proteasome component C5 [Neurospora tetrasperma FGSC 2508]
Length = 265
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 22/137 (16%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLF---------------I 51
NG + +A+ G + +A D RL + + S+ H +LF +
Sbjct: 41 NGGSTLAIAGADFTIMAGDTRL-------TSGYSINSRYHPKLFKIGGTTADQKDATIVL 93
Query: 52 GLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAG 111
+ G A D + L +RL K+Y+ R + M + A +S +LY+KRF PY+ ++ G
Sbjct: 94 SVVGFAADGEALKERLDAICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYYVYAILGG 153
Query: 112 LSDEDKPFICTMDSIGA 128
L +E K I + D +G+
Sbjct: 154 LDEEGKGAIYSYDPVGS 170
>gi|225711612|gb|ACO11652.1| Proteasome subunit beta type-1 precursor [Caligus rogercresseyi]
Length = 238
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG V + G + IASD RL ++ + +I ++ +G G D T +
Sbjct: 33 NGGTTVGIAGSDFVVIASDTRLASSYDILSRNVPKIFELGSGCVLGSCGCWCDVLTFIRV 92
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
+ K Y +++ A ++S LY +RF PY+ V+AGL ++ + I T D +
Sbjct: 93 AESKLKDYHYTHGKELNTPALAQMLSNTLYRRRFFPYYIHNVLAGLDEKGQGVIYTYDPV 152
Query: 127 G 127
G
Sbjct: 153 G 153
>gi|448530967|ref|ZP_21620801.1| 20S proteasome A and B subunits [Halorubrum hochstenium ATCC
700873]
gi|445707407|gb|ELZ59261.1| 20S proteasome A and B subunits [Halorubrum hochstenium ATCC
700873]
Length = 243
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + ++ +A+D R + + D Q++ +IH R + ++G + +Q L L
Sbjct: 49 GTTTVGIKAEDGVVMATDMRASLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLISTL 108
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
LY+ R +DM E ++L LL F Y QP++ G+ DE I ++D++G
Sbjct: 109 RAETSLYEARRGKDMSMEALSTLTGNLLRSGAF--YIVQPILGGVDDE-GAHIYSIDALG 165
Query: 128 A 128
Sbjct: 166 G 166
>gi|448435232|ref|ZP_21586709.1| 20S proteasome A and B subunits [Halorubrum tebenquichense DSM
14210]
gi|445684056|gb|ELZ36442.1| 20S proteasome A and B subunits [Halorubrum tebenquichense DSM
14210]
Length = 243
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + ++ +A+D R + + D Q++ +IH R + ++G + +Q L L
Sbjct: 49 GTTTVGIKAEDGVVMATDMRASLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLISTL 108
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
LY+ R +DM E ++L LL F Y QP++ G+ DE I ++D++G
Sbjct: 109 RAETSLYEARRGKDMSMEALSTLTGNLLRSGAF--YIVQPILGGVDDE-GAHIYSIDALG 165
Query: 128 A 128
Sbjct: 166 G 166
>gi|429217521|ref|YP_007175511.1| proteasome endopeptidase complex subunit beta [Caldisphaera
lagunensis DSM 15908]
gi|429134050|gb|AFZ71062.1| proteasome endopeptidase complex, archaeal, beta subunit
[Caldisphaera lagunensis DSM 15908]
Length = 210
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 64/127 (50%), Gaps = 2/127 (1%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
S+ ++G+ V + KN +A+D+R + ++I KI D + ++GL D+Q
Sbjct: 9 SLKAFHGTTTVGFITKNAVILAADKRATAGTLIASRTVKKIVKITDYAAMTIAGLVADAQ 68
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
L + +LY+ +R + + A+L++ +L+ ++ PY Q ++ G E P +
Sbjct: 69 MLADAIREEARLYETMNKRKLTVKGMATLLANVLFSTKYYPYLVQLIVGGYDTE--PRLY 126
Query: 122 TMDSIGA 128
+D G+
Sbjct: 127 NLDYFGS 133
>gi|170089877|ref|XP_001876161.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
gi|164649421|gb|EDR13663.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
Length = 249
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
NG ++A+ G + IA D R G +QT ++ ++ D+ + ++G A D
Sbjct: 16 NGGTILAIAGADFSVIAGDTRQSEGYSIQTRYA--PKVFRLTDKAVLAVNGFAADGNMFV 73
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+++ R + Y+ +DM A L+ +LY +RF PY+ ++ G+ ++ + + D
Sbjct: 74 KKVRQRLEWYRHAHSKDMPIRAIARLIQTMLYARRFFPYYVYNILGGIEEDGTGAVYSFD 133
Query: 125 SIGA 128
+G+
Sbjct: 134 PVGS 137
>gi|426195798|gb|EKV45727.1| 20S proteasome subunit [Agaricus bisporus var. bisporus H97]
Length = 256
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
NG ++A+ G + IA D R G +QT ++ ++ D+ + ++G A D
Sbjct: 23 NGGTILAIAGADFSVIAGDTRQSEGYSIQTRYA--PKVFRLTDKAVLAVNGFAADGNMFV 80
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+++ R + Y+ +DM A L+ +LY +RF PY+ ++ G+ ++ + + D
Sbjct: 81 KKVRQRLEWYRHAHAKDMPIRAIARLIQTMLYSRRFFPYYVYNILGGIEEDGTGAVYSFD 140
Query: 125 SIGA 128
+G+
Sbjct: 141 PVGS 144
>gi|340344597|ref|ZP_08667729.1| Proteasome endopeptidase complex [Candidatus Nitrosoarchaeum
koreensis MY1]
gi|339519738|gb|EGP93461.1| Proteasome endopeptidase complex [Candidatus Nitrosoarchaeum
koreensis MY1]
Length = 197
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 63/121 (52%), Gaps = 2/121 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + +AS++R+ ++ ++ I ++ +GL D Q L ++
Sbjct: 7 GATAVGITFNGGIVLASEKRIAFGNFLVSKSSKKTFSITSKVGAACAGLVADMQILTLQI 66
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
K+ ++ +RD+ P T A ++S ++YE+R+ P Q ++ G+ DKP + T+D +G
Sbjct: 67 AALAKIRKMELKRDVPPNTVAKMMSNMMYERRYFPLLTQVIVGGVV--DKPILYTLDPLG 124
Query: 128 A 128
+
Sbjct: 125 S 125
>gi|389745045|gb|EIM86227.1| proteasome subunit [Stereum hirsutum FP-91666 SS1]
Length = 258
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Query: 7 NGSALVAMVGKNCFAIASDRR----LGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
NG ++A+ G + IASD R +Q + FQ + DR + ++G A D
Sbjct: 26 NGGTILAIAGADFTVIASDTRQTEGFSIQTRYAPKAFQ----LTDRAVLAVNGFAADGNM 81
Query: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
+++ R + Y+ +DM A L+ +LY +RF PY+ ++ G+ ++ + +
Sbjct: 82 FVKQVKQRLEWYRHAHAKDMPLRAIARLIQTMLYGRRFFPYYVYNILGGIEEDGTGAVYS 141
Query: 123 MDSIGA 128
D +G+
Sbjct: 142 FDPVGS 147
>gi|432331212|ref|YP_007249355.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanoregula formicicum SMSP]
gi|432137921|gb|AGB02848.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanoregula formicicum SMSP]
Length = 213
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ + +V + +A+++R + L + +++ ++ DR+ + +G D+Q L + L
Sbjct: 11 GTTTIGIVFADGVILATEKRATMGLMIASKKAKKVYQVADRIGMTTAGGVGDAQQLARIL 70
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
LYQ+R R + A+L+S L + R+ PY+ Q ++ G+ DE P + ++D++G
Sbjct: 71 NVECNLYQIRRSRPITVGATATLLSNYLNQNRYFPYYVQLLVGGV-DEKGPSVYSVDAMG 129
Query: 128 A 128
Sbjct: 130 G 130
>gi|387592573|gb|EIJ87597.1| hypothetical protein NEQG_02144 [Nematocida parisii ERTm3]
gi|387595200|gb|EIJ92825.1| hypothetical protein NEPG_02224 [Nematocida parisii ERTm1]
Length = 242
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 58/122 (47%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
N ++++G + +ASD R + + R + +G DS+ +Y
Sbjct: 35 NSGTSLSIIGADFCVVASDTRHSAPYNINTRHATKSFCLDGRFILSTTGFYADSRFVYTE 94
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L ++ YQ + + M E A+L+ LLY+ RF P F + G ++E+KP I + D +
Sbjct: 95 LAYQIDKYQFKYNKKMGIEQAAALLHVLLYKHRFFPKFTYCCLVGFNEEEKPKIFSYDPV 154
Query: 127 GA 128
G+
Sbjct: 155 GS 156
>gi|167044620|gb|ABZ09292.1| putative Proteasome A-type and B-type [uncultured marine
crenarchaeote HF4000_APKG7F19]
Length = 199
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + AS+RR+ ++ ++ I ++ +GL D Q L ++
Sbjct: 8 GATAVGITYDEGVVFASERRIAYGNFVVSKTTKKTFVITPQVGAACAGLVADMQILSLQI 67
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
K+ ++ +R++ P T A ++S ++YE+RF P Q ++ GL DKP I T+D +G
Sbjct: 68 SALAKIRKMEIKREVPPNTIAKMMSNMMYERRFFPLLTQVIVGGLV--DKPVIYTLDPLG 125
Query: 128 A 128
+
Sbjct: 126 S 126
>gi|393229883|gb|EJD37498.1| proteasome subunit [Auricularia delicata TFB-10046 SS5]
Length = 242
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
NG ++A+ G + +A D R G +QT ++ ++ D+ + ++G A D
Sbjct: 12 NGGTILAVAGADFAVVAGDTRQTEGYSIQTRYA--PKVFRLTDKAVLAVNGFAADGNMFV 69
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+++ R + Y+ +DM ++ A ++ +LY KRF PY+ ++ G+ ++ + + D
Sbjct: 70 KKVKQRLEWYRHAHSKDMPLQSIARMIQTMLYAKRFFPYYVYNILGGIDEQGVGAVYSFD 129
Query: 125 SIGA 128
+G+
Sbjct: 130 PVGS 133
>gi|367011887|ref|XP_003680444.1| hypothetical protein TDEL_0C03440 [Torulaspora delbrueckii]
gi|359748103|emb|CCE91233.1| hypothetical protein TDEL_0C03440 [Torulaspora delbrueckii]
Length = 241
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + G++ +A D R + ++ D + + +G A D + L +R
Sbjct: 27 NGGTILGIAGEDFAVLAGDTRHTTDYSINSRHESKVFDCGDNIVMSANGFAADGEALVKR 86
Query: 67 LVFRHKLYQL-REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
K Y ++ + + A + LLY KRF PY+ +IAGL +E K + + D
Sbjct: 87 FKNSVKWYHFDHNDKKLSLSSAARNIQHLLYGKRFFPYYVHTIIAGLDEEGKGAVYSFDP 146
Query: 126 IGA 128
+G+
Sbjct: 147 VGS 149
>gi|429216737|ref|YP_007174727.1| proteasome endopeptidase complex subunit beta [Caldisphaera
lagunensis DSM 15908]
gi|429133266|gb|AFZ70278.1| proteasome endopeptidase complex, archaeal, beta subunit
[Caldisphaera lagunensis DSM 15908]
Length = 207
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 67/128 (52%), Gaps = 1/128 (0%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
M+I+ G+AL + K+ +A+D+R+ ++ + +++ ++DR+ I L+GL D
Sbjct: 1 MAISYEQGTAL-GIKAKDGVVLATDKRMSYGSFIMSRNAKKVYLLNDRVGIALTGLYADV 59
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
L + + Y+ E M + L S +LY + P+ + +I GL + KP I
Sbjct: 60 SGLVRIMNAEISYYETTNETTMSLYAISKLFSNILYSYKMLPFLIESIIGGLDRDGKPKI 119
Query: 121 CTMDSIGA 128
T+D++G+
Sbjct: 120 YTLDALGS 127
>gi|329764912|ref|ZP_08256501.1| proteasome endopeptidase complex [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|393795409|ref|ZP_10378773.1| proteasome endopeptidase complex protein [Candidatus
Nitrosoarchaeum limnia BG20]
gi|329138581|gb|EGG42828.1| proteasome endopeptidase complex [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 195
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + ++ +AS++R+ ++ ++ I ++ +GL D Q L ++
Sbjct: 5 GATAVGITFQDGIVLASEKRIAFGNFLVSKTTKKTFPITPKVGATCAGLVADMQILTLQI 64
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
K+ ++ +RD+ P T A ++S ++YE+R+ P Q ++ G+ DKP + T+D +G
Sbjct: 65 AALAKIRKMELKRDVPPNTIAKMMSNMMYERRYFPLLTQVIVGGII--DKPILFTLDPLG 122
Query: 128 A 128
+
Sbjct: 123 S 123
>gi|121709884|ref|XP_001272558.1| proteasome component Prs3, putative [Aspergillus clavatus NRRL 1]
gi|119400708|gb|EAW11132.1| proteasome component Prs3, putative [Aspergillus clavatus NRRL 1]
Length = 261
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHD--------RLFIGLSGLAT 58
NG + + + G + +A D R + ++ KI R+ + + G A
Sbjct: 37 NGGSTLGITGSDFAILAGDTRSVAGYNINSRYVPKVFKIGGDAETGEGARILLSVVGFAA 96
Query: 59 DSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKP 118
D Q L +RL K+Y+ + + M A +S +LY+KRF PY+ ++AGL +E K
Sbjct: 97 DGQALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVHAILAGLDEEGKG 156
Query: 119 FICTMDSIGA 128
+ + D +G+
Sbjct: 157 ALYSYDPVGS 166
>gi|198463833|ref|XP_002135596.1| GA28639 [Drosophila pseudoobscura pseudoobscura]
gi|198151431|gb|EDY74223.1| GA28639 [Drosophila pseudoobscura pseudoobscura]
Length = 216
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 61/123 (49%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG ++A+ GK+ I D RL ++ ++ + ++ + +G D+ +L
Sbjct: 11 ENNGGTVLAIAGKDFVVIGGDTRLSSGCAILSRTQTKLCPLSKQMVVAATGCGCDAVSLT 70
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
L + + Y+ + + M E+ A ++S + Y++R PY P++ G+ + + + + D
Sbjct: 71 NLLKVKQQGYENQHHKVMSIESMAQMLSVVQYQRRHLPYNVSPILGGIDQDGQGAVFSYD 130
Query: 125 SIG 127
IG
Sbjct: 131 CIG 133
>gi|398010249|ref|XP_003858322.1| proteasome beta 6 subunit, putative [Leishmania donovani]
gi|322496529|emb|CBZ31598.1| proteasome beta 6 subunit, putative [Leishmania donovani]
Length = 247
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 7/151 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRL-GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
NG A+ GK+ +A D RL G D +I ++ ++ +G+ D L Q
Sbjct: 40 NGGTTAAIAGKDFVILAGDTRLNGDYCLHSRHDQSKIFQLTPYTYMASNGMQADRLQLQQ 99
Query: 66 RLVFRHKLYQLREERDMKP-ETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
L +R K YQ + P + A L+S +LY +RF PY+ ++ GL +E + D
Sbjct: 100 MLKYRVKWYQYNNGGRVPPTKAIAQLMSTMLYHRRFFPYYTFNMVVGLDEEGHGVCYSYD 159
Query: 125 SIGAKYVGSLQKILLLLELLESLFMVPVRQC 155
+ VGS + L + F+ PV C
Sbjct: 160 A-----VGSTEPFLYGTRGSAASFLEPVLDC 185
>gi|392572662|gb|EIW65807.1| hypothetical protein TREMEDRAFT_46043 [Tremella mesenterica DSM
1558]
Length = 270
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
NG ++A+ G + IA D R G +QT +++ ++ D + +G A D +
Sbjct: 29 NGGTILAIAGADFSVIAGDTRQSEGYSIQTRYA--RKVFQLTDNAVLATNGFAADGKNFV 86
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+RL + YQ + M + A L+ +LY +RF PY+ ++ G+ ++ + + D
Sbjct: 87 RRLKQSLEWYQHNHHKQMGLKAIARLIQTMLYGRRFFPYYVYNILGGIEEDGSGAVYSFD 146
Query: 125 SIGA 128
+G+
Sbjct: 147 PVGS 150
>gi|170291074|ref|YP_001737890.1| proteasome endopeptidase complex protein [Candidatus Korarchaeum
cryptofilum OPF8]
gi|302595814|sp|B1L6X8.1|PSB2_KORCO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|170175154|gb|ACB08207.1| Proteasome endopeptidase complex [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 198
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Query: 22 IASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERD 81
+A+DRR+ ++ +++ I++R+ + +GL D Q L L + +Y+L E+
Sbjct: 17 LAADRRVSYNGFILSKSARKVFLINERVGVSTAGLPGDFQELVDVLKYNITMYELENEKA 76
Query: 82 MKPETFASLVSALLYEKRF-GPYFCQPVIAGLSDEDKPFICTMDSIGA 128
P A L+S LLY+ RF G Y+ + V+ G+ D P I +D G
Sbjct: 77 ATPTNVAKLLSILLYQGRFSGIYYAELVVGGI-DNSGPKIFVLDPAGG 123
>gi|218884589|ref|YP_002428971.1| Proteasome subunit [Desulfurococcus kamchatkensis 1221n]
gi|390939081|ref|YP_006402819.1| proteasome endopeptidase complex subunit beta [Desulfurococcus
fermentans DSM 16532]
gi|302595704|sp|B8D673.1|PSB1_DESK1 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|218766205|gb|ACL11604.1| Proteasome subunit [Desulfurococcus kamchatkensis 1221n]
gi|390192188|gb|AFL67244.1| proteasome endopeptidase complex, beta subunit [Desulfurococcus
fermentans DSM 16532]
Length = 202
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 22 IASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERD 81
+AS++RL ++ + ++I I + + +G +GL D L + L K Y+L+ R+
Sbjct: 21 LASEKRLTYDGFVLSRNARKIHMITNHIGVGFAGLMGDVNFLVKVLRLEAKNYELQHGRE 80
Query: 82 MKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGA----KYV 131
+K + A L+S +LY + P + V+ G DE+ P + +D +G+ KYV
Sbjct: 81 IKTRSLAKLLSVILYSYKLAPMLTEVVVGGY-DEEGPSLYILDPVGSVIEEKYV 133
>gi|119467908|ref|XP_001257760.1| proteasome component Prs3, putative [Neosartorya fischeri NRRL 181]
gi|119405912|gb|EAW15863.1| proteasome component Prs3, putative [Neosartorya fischeri NRRL 181]
Length = 261
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 12/132 (9%)
Query: 7 NGSALVAMVGKNCFAIASDRR--LGVQLQT--------IATDFQRISKIHDRLFIGLSGL 56
NG + + + G + +A D R G + + I D + H + + + G
Sbjct: 37 NGGSTLGITGSDFAILAGDTRSVAGYNINSRYVPKVFKIGGDAETGEGAH--ILLSVVGF 94
Query: 57 ATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED 116
A D Q L +RL K+Y+ + + M A +S +LY+KRF PY+ ++AGL +E
Sbjct: 95 AADGQALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVHAILAGLDEEG 154
Query: 117 KPFICTMDSIGA 128
K + + D +G+
Sbjct: 155 KGALYSYDPVGS 166
>gi|366989313|ref|XP_003674424.1| hypothetical protein NCAS_0A14880 [Naumovozyma castellii CBS 4309]
gi|342300287|emb|CCC68046.1| hypothetical protein NCAS_0A14880 [Naumovozyma castellii CBS 4309]
Length = 241
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + G++ +A D R + ++ D + I +G A D + L +R
Sbjct: 27 NGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFDCGDNIVISANGFAADGEALVKR 86
Query: 67 LVFRHKLYQL-REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
K Y ++ + + A + LLY KRF PY+ +IAGL +E K + + D
Sbjct: 87 FKNSLKWYHFDHNDKKLAMSSAARNIQHLLYGKRFFPYYVHTIIAGLDEEGKGAVYSFDP 146
Query: 126 IGA 128
+G+
Sbjct: 147 VGS 149
>gi|164422783|ref|XP_963776.2| proteasome component C5 [Neurospora crassa OR74A]
gi|157069819|gb|EAA34540.2| proteasome component C5 [Neurospora crassa OR74A]
Length = 265
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 22/137 (16%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLF---------------I 51
NG + +A+ G + +A D RL + + S+ H +LF +
Sbjct: 41 NGGSTLAIAGADFTIMAGDTRL-------TSGYSINSRYHPKLFKIGGTTADQKDATIVL 93
Query: 52 GLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAG 111
+ G A D + L +RL K+Y+ R + M + A +S +LY+KRF PY+ ++ G
Sbjct: 94 SVVGFAADGEALKERLDAICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYYVYAILGG 153
Query: 112 LSDEDKPFICTMDSIGA 128
L +E K + + D +G+
Sbjct: 154 LDEEGKGAVYSYDPVGS 170
>gi|324507472|gb|ADY43167.1| Proteasome subunit beta type-1 [Ascaris suum]
Length = 253
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 62/123 (50%), Gaps = 1/123 (0%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLG-VQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ G + A+ G N IASD R+ ++ + D ++I +++ + + SG D L
Sbjct: 44 FEGGSTAALAGDNFAIIASDTRMSQFEINILTRDAEKIHVLNNSIILACSGFYGDVLQLK 103
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L R Y+ DM + A L++ LY +RF PY+ ++AG+ ++ K + + D
Sbjct: 104 RLLEARLHKYRFDYRGDMTVDLCAELLARNLYYRRFFPYYTGSILAGIDEDGKGAVFSYD 163
Query: 125 SIG 127
IG
Sbjct: 164 PIG 166
>gi|350296725|gb|EGZ77702.1| proteasome component C5 [Neurospora tetrasperma FGSC 2509]
Length = 265
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 22/137 (16%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLF-IGLS----------- 54
NG + +A+ G + +A D RL + + S+ H +LF IG +
Sbjct: 41 NGGSTLAIAGADFTIMAGDTRL-------TSGYSINSRYHPKLFKIGGTTADQKDATIVL 93
Query: 55 ---GLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAG 111
G A D + L +RL K+Y+ R + M + A +S +LY+KRF PY+ ++ G
Sbjct: 94 SVVGFAADGEALKERLDAICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYYVYAILGG 153
Query: 112 LSDEDKPFICTMDSIGA 128
L +E K + + D +G+
Sbjct: 154 LDEEGKGAVYSYDPVGS 170
>gi|255714573|ref|XP_002553568.1| KLTH0E01826p [Lachancea thermotolerans]
gi|238934950|emb|CAR23131.1| KLTH0E01826p [Lachancea thermotolerans CBS 6340]
Length = 242
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 1/123 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + G++ +A D R + ++ D + I +G A D L +R
Sbjct: 28 NGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFDCGDNILISANGFAADGNALVKR 87
Query: 67 LVFRHKLYQL-REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
K Y ++ + + A + LLY KRF PY+ +IAGL +E K + + D
Sbjct: 88 FQNSLKWYHFDHNDKKLSMRSAARNIQHLLYGKRFFPYYVHTIIAGLDEEGKGAVYSFDP 147
Query: 126 IGA 128
+G+
Sbjct: 148 VGS 150
>gi|171680321|ref|XP_001905106.1| hypothetical protein [Podospora anserina S mat+]
gi|170939787|emb|CAP65013.1| unnamed protein product [Podospora anserina S mat+]
Length = 264
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 22/137 (16%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLF---------------I 51
NG + +A+ G + +A D RL + + S+ H ++F +
Sbjct: 40 NGGSTLAIAGADFTIMAGDTRL-------TSGYSINSRFHPKVFKIGGTTSDQSDATLVL 92
Query: 52 GLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAG 111
+ G A D + L +RL K+Y+ R + M + A +S +LY+KRF PY+ ++ G
Sbjct: 93 SVVGFAADGEALKERLDAICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYYAYAILGG 152
Query: 112 LSDEDKPFICTMDSIGA 128
L +E K + + D +G+
Sbjct: 153 LDEEGKGAVYSYDPVGS 169
>gi|212223310|ref|YP_002306546.1| proteasome subunit beta [Thermococcus onnurineus NA1]
gi|302595732|sp|B6YSW2.1|PSB1_THEON RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|212008267|gb|ACJ15649.1| proteasome, beta subunit [Thermococcus onnurineus NA1]
Length = 203
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ V +V K+ +A+DRR + ++ + ++ +I D L + +G D +L +
Sbjct: 6 KGTTTVGIVCKDGVVLAADRRASLGNMVLSKEVTKVFQIDDHLALAGAGSVGDILSLVRL 65
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L KLY+ + R++ + A+L S +L+ RF PYF +IAG ++KP + ++D
Sbjct: 66 LRAEVKLYRAKVGREISVKALATLTSNILHGSRFMPYFGWFLIAGY--DEKPALYSLDMA 123
Query: 127 GA 128
G
Sbjct: 124 GG 125
>gi|440636579|gb|ELR06498.1| 20S proteasome subunit beta 6 [Geomyces destructans 20631-21]
Length = 266
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 10/131 (7%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDR--------LFIGLSGLA 57
NG + +A+ G N +A D R I T ++ ++ KI L + + G A
Sbjct: 42 NGGSTLAIAGDNFAILAGDTR-STSGYNINTRYEPKVFKIGGSGSTQRDATLILSVVGFA 100
Query: 58 TDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDK 117
D+ L +RL KLY+ + + M + A +S +LY+KRF PY+ ++ GL +E K
Sbjct: 101 ADANALKERLDTVVKLYRYQHGKAMTVKAAAQRLSIILYQKRFFPYYAHAILGGLDEEGK 160
Query: 118 PFICTMDSIGA 128
+ + D +G+
Sbjct: 161 GAVYSYDPVGS 171
>gi|448488453|ref|ZP_21607289.1| 20S proteasome A and B subunits [Halorubrum californiensis DSM
19288]
gi|445696143|gb|ELZ48236.1| 20S proteasome A and B subunits [Halorubrum californiensis DSM
19288]
Length = 243
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + + +A+D R + + D Q++ +IH R + ++G + +Q L L
Sbjct: 49 GTTTVGIKADDGVVMATDMRASLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLISTL 108
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
LY+ R +DM E ++L LL F Y QP++ G+ DE I ++D++G
Sbjct: 109 RAETSLYEARRGKDMSMEALSTLTGNLLRSGAF--YIVQPILGGVDDE-GAHIYSIDALG 165
Query: 128 A 128
Sbjct: 166 G 166
>gi|288931294|ref|YP_003435354.1| proteasome endopeptidase complex subunit beta [Ferroglobus placidus
DSM 10642]
gi|302595823|sp|D3RX66.1|PSB_FERPA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|288893542|gb|ADC65079.1| proteasome endopeptidase complex, beta subunit [Ferroglobus
placidus DSM 10642]
Length = 210
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 71/132 (53%), Gaps = 5/132 (3%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+ G+ V +V K+ +A+++R + + ++I KI DR+ + +G D+Q L +
Sbjct: 7 FKGTTTVGLVCKDGVVLATEKRATMGNFIASRRAKKIYKITDRIAMTTAGSVGDAQFLAR 66
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ LY +R+E + + A+LVS LL R+ PY Q +I G+ D+ I ++D
Sbjct: 67 LIKVETNLYTIRKEEEPTVKAVATLVSNLLNSVRYFPYLVQLLIGGV-DKTGAKIYSIDP 125
Query: 126 IGAKYVGSLQKI 137
IG G++++I
Sbjct: 126 IG----GAIEEI 133
>gi|156847580|ref|XP_001646674.1| hypothetical protein Kpol_1028p92 [Vanderwaltozyma polyspora DSM
70294]
gi|156117353|gb|EDO18816.1| hypothetical protein Kpol_1028p92 [Vanderwaltozyma polyspora DSM
70294]
Length = 242
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + G++ +A D R + ++ D + I +G A D + L +R
Sbjct: 28 NGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFDCGDNIVISANGFAADGEALVKR 87
Query: 67 LVFRHKLYQL-REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
K Y ++ + + A + LLY KRF PY+ +IAGL +E K + + D
Sbjct: 88 FKNSIKWYHFDNNDKTLSLSSAARNIQHLLYGKRFFPYYVHTIIAGLDEEGKGAVYSFDP 147
Query: 126 IGA 128
+G+
Sbjct: 148 VGS 150
>gi|448503545|ref|ZP_21613174.1| 20S proteasome A and B subunits [Halorubrum coriense DSM 10284]
gi|445691746|gb|ELZ43929.1| 20S proteasome A and B subunits [Halorubrum coriense DSM 10284]
Length = 243
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 5/122 (4%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + ++ +A+D R + + D Q++ +IH R + ++G + +Q L L
Sbjct: 49 GTTTVGIKAEDGVVMATDMRASLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLISTL 108
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYF-CQPVIAGLSDEDKPFICTMDSI 126
LY+ R +DM E ++L LL R G +F QP++ G+ DE I ++D++
Sbjct: 109 RAETSLYEARRSKDMSMEALSTLTGNLL---RSGAFFVVQPILGGVDDE-GAHIYSIDAL 164
Query: 127 GA 128
G
Sbjct: 165 GG 166
>gi|83314992|ref|XP_730601.1| proteasome subunit beta type 1 [Plasmodium yoelii yoelii 17XNL]
gi|23490372|gb|EAA22166.1| proteasome subunit beta type 1-related [Plasmodium yoelii yoelii]
Length = 214
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 53/93 (56%)
Query: 41 RISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRF 100
+ISKI D+ IG SG+ +D +TL+ L + +L+ L A L+ LY +RF
Sbjct: 44 KISKITDKCIIGSSGMQSDIKTLHSLLQKKIQLFYLEHSHYPSIHVIAKLLCVTLYSRRF 103
Query: 101 GPYFCQPVIAGLSDEDKPFICTMDSIGAKYVGS 133
PY+ ++AG+ ++ K + + D+IG+ Y+ +
Sbjct: 104 FPYYTFNILAGIDEDGKGVLYSYDAIGSYYMST 136
>gi|225719776|gb|ACO15734.1| Proteasome subunit beta type-1 precursor [Caligus clemensi]
Length = 271
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRL-GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
NG + + G + IASD RL ++ + ++ ++ ++ +G G D T +
Sbjct: 65 NGGTTIGIAGPDFAVIASDTRLTSGGYDILSRNVPKVFQLSEKSVLGSCGCWCDVLTFVR 124
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ + K Y +D+ A L+S LY++RF PY+ V+AGL + + I T D
Sbjct: 125 VMESKMKNYSYTHGKDLGTPALAQLISNSLYQRRFLPYYIHNVLAGLDENGQGCIYTYDP 184
Query: 126 IG 127
+G
Sbjct: 185 VG 186
>gi|327401050|ref|YP_004341889.1| proteasome endopeptidase complex subunit beta [Archaeoglobus
veneficus SNP6]
gi|327316558|gb|AEA47174.1| proteasome endopeptidase complex, beta subunit [Archaeoglobus
veneficus SNP6]
Length = 214
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+ G+ V ++ K+ +A+++R + + ++I ++ DR+ + +G D+Q L +
Sbjct: 9 FKGTTTVGLICKDGIVLATEKRATIGNYIASRRAKKIYQVADRVAMTTAGSVGDAQFLAR 68
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ LY+ R+E + A+++S LL R+ PYF Q +I G+ D+ P + ++D
Sbjct: 69 LVKVEASLYETRKEEKPTVKAIATMLSNLLNSSRYFPYFVQLLIGGV-DKRGPSMFSIDP 127
Query: 126 IGA 128
IG
Sbjct: 128 IGG 130
>gi|282165069|ref|YP_003357454.1| proteasome subunit beta [Methanocella paludicola SANAE]
gi|302595754|sp|D1Z199.1|PSB_METPS RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|282157383|dbj|BAI62471.1| proteasome subunit beta [Methanocella paludicola SANAE]
Length = 205
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 66/129 (51%), Gaps = 3/129 (2%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
M +Y G+ V ++ N +A++RR + + D Q+I ++ D + + ++G D
Sbjct: 1 MDDKQYKGTTTVGIICNNGLVLATERRATMGNLIASRDAQKIYQLTDNIAMTIAGSVGDG 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
Q L + L KL++LR M + L+S LL+E R ++ Q ++ G+ D+ P +
Sbjct: 61 QRLARMLQAESKLFELRRHGPMSINALSMLLSNLLWEYRI--FYIQVLVGGV-DKSGPKL 117
Query: 121 CTMDSIGAK 129
++D G +
Sbjct: 118 FSLDPAGGR 126
>gi|125977126|ref|XP_001352596.1| GA17955 [Drosophila pseudoobscura pseudoobscura]
gi|195168113|ref|XP_002024876.1| GL17976 [Drosophila persimilis]
gi|54641344|gb|EAL30094.1| GA17955 [Drosophila pseudoobscura pseudoobscura]
gi|194108306|gb|EDW30349.1| GL17976 [Drosophila persimilis]
Length = 235
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 62/123 (50%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG ++VA+ G++ IA+D RL ++ + ++ + +G D+ +L
Sbjct: 26 ESNGGSIVAIAGEDFVVIAADTRLSSGYNIHTRKQSKLFPLSNQTVLASTGCWCDTLSLT 85
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ R + Y+ + M + A ++S ++Y +RF PY+ ++AG+ + K + + D
Sbjct: 86 GLMKLRMQNYEHTHLKTMTTDAVAQMLSIIMYNRRFFPYYVSNILAGIDKDGKGVVFSYD 145
Query: 125 SIG 127
IG
Sbjct: 146 PIG 148
>gi|448472548|ref|ZP_21601172.1| 20S proteasome A and B subunits [Halorubrum aidingense JCM 13560]
gi|445819852|gb|EMA69686.1| 20S proteasome A and B subunits [Halorubrum aidingense JCM 13560]
Length = 243
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 63/122 (51%), Gaps = 5/122 (4%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + ++ +A+D R + + D Q++ +IH R + ++G + +Q L L
Sbjct: 49 GTTTVGIRTEDGVVMATDMRASLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLISTL 108
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYF-CQPVIAGLSDEDKPFICTMDSI 126
LY+ R +DM E ++L LL R G +F QP++ G+ D+D I ++D++
Sbjct: 109 KAETSLYETRRGKDMSMEALSTLTGNLL---RTGAFFIVQPILGGV-DDDGAHIYSIDAL 164
Query: 127 GA 128
G
Sbjct: 165 GG 166
>gi|409096228|ref|ZP_11216252.1| proteasome subunit beta [Thermococcus zilligii AN1]
Length = 201
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 2/121 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + K+ +A+D + + + ++I I DR+ I +G D Q L + L
Sbjct: 8 GTTTVGIKVKDGVVLAADTQASLDHMVETLNIRKILPITDRIAITTAGSVGDVQALARML 67
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+ YQ R MK A+L+S +L E ++ PY Q +I G DE P + ++D++G
Sbjct: 68 EAEARYYQFTWGRPMKTRAMANLLSNILNENKWFPYMVQILIGGYVDE--PELASLDALG 125
Query: 128 A 128
Sbjct: 126 G 126
>gi|367001675|ref|XP_003685572.1| hypothetical protein TPHA_0E00420 [Tetrapisispora phaffii CBS 4417]
gi|357523871|emb|CCE63138.1| hypothetical protein TPHA_0E00420 [Tetrapisispora phaffii CBS 4417]
Length = 241
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + G++ +A D R + ++ D + I +G A D + L +R
Sbjct: 27 NGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFDCGDDIIISANGFAADGEALVKR 86
Query: 67 LVFRHKLYQL-REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
K Y ++ + + A + LLY KRF PY+ +IAGL +E K + + D
Sbjct: 87 FKNSIKWYHFDNNDKKLALSSAARNIQHLLYGKRFFPYYVHTIIAGLDEEGKGAVYSFDP 146
Query: 126 IGA 128
+G+
Sbjct: 147 VGS 149
>gi|323448836|gb|EGB04730.1| hypothetical protein AURANDRAFT_32152 [Aureococcus anophagefferens]
Length = 219
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 6/138 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +L A G + +A+D +L + +T F+R S + + +G SG D +L
Sbjct: 18 NGGSLAAASGHDFTLLAADSQLVHGMTIASTVFERTSALGNLAALGTSGCVADCDSLSHD 77
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L + Y E M+ A + S ++Y +R PY+ ++ GL +C DS
Sbjct: 78 LRMEAERYFWGAEMSMEASVAAQVCSQMMYARRAFPYYASLLLCGLDRFGTGRVCVFDSF 137
Query: 127 GA------KYVGSLQKIL 138
G+ VGS Q +L
Sbjct: 138 GSITEGQMVAVGSAQGVL 155
>gi|119567808|gb|EAW47423.1| proteasome (prosome, macropain) subunit, beta type, 1, isoform
CRA_d [Homo sapiens]
Length = 205
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 6/112 (5%)
Query: 23 ASDRRLGVQLQTIATDFQ-RISKI-----HDRLFIGLSGLATDSQTLYQRLVFRHKLYQL 76
A+ R LG++ A Q R S D+ IG SG D TL + + R K+Y+
Sbjct: 10 AAGRDLGMEPHRAAGPLQLRFSPYVFNGGTDKTVIGCSGFHGDCLTLTKIIEARLKMYKH 69
Query: 77 REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGA 128
+ M A+++S +LY +RF PY+ +I GL +E K + + D +G+
Sbjct: 70 SNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGS 121
>gi|389626457|ref|XP_003710882.1| proteasome component C5 [Magnaporthe oryzae 70-15]
gi|351650411|gb|EHA58270.1| proteasome component C5 [Magnaporthe oryzae 70-15]
gi|440470291|gb|ELQ39366.1| proteasome component C5 [Magnaporthe oryzae Y34]
gi|440486750|gb|ELQ66588.1| proteasome component C5 [Magnaporthe oryzae P131]
Length = 265
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDR--------LFIGLSGLAT 58
NG + +A+ G + +A D R+ + ++ KI L + + G A
Sbjct: 41 NGGSTLAIAGDDFAIMAGDTRMASGYSINTRFYPKVFKIGGTTADNSDATLVLSVVGFAA 100
Query: 59 DSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKP 118
D + L +RL K+Y+ R + M + A +S +LY+KRF PY+ ++AG+ +E
Sbjct: 101 DGEALKERLDAICKIYRYRHGKPMTVKACAKRLSTILYQKRFFPYYTHAILAGIDEEGHG 160
Query: 119 FICTMDSIGA 128
+ + D +G+
Sbjct: 161 AVYSYDPVGS 170
>gi|307353377|ref|YP_003894428.1| proteasome endopeptidase complex subunit beta [Methanoplanus
petrolearius DSM 11571]
gi|307156610|gb|ADN35990.1| proteasome endopeptidase complex, beta subunit [Methanoplanus
petrolearius DSM 11571]
Length = 209
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V +V +A++RR + + +++ +I DR+ + +G D+Q L + +
Sbjct: 14 GTTTVGLVFDGGVILATERRATMGNMIASKKAKKVYQIADRIGMTTAGGVGDAQQLARWV 73
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
LY +R R+M ASL+S +L R PY+ Q ++ G+ D P I ++D++G
Sbjct: 74 QVECSLYNIRRGREMSVGASASLLSNILNNNRMMPYYVQLLVGGV-DSGGPSIYSVDALG 132
Query: 128 A 128
Sbjct: 133 G 133
>gi|346321014|gb|EGX90614.1| proteasome component PRE4 [Cordyceps militaris CM01]
Length = 262
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G++++ + K+ IA+D TD QRI + +G SG +D Q + Q L
Sbjct: 41 GTSVIGIKFKDGVVIAADNLASYGSLARFTDVQRIKTFQGKSVVGFSGDVSDMQYMDQHL 100
Query: 68 VF--RHKLYQLREERDMKPETFASLVSALLYEKR--FGPYFCQPVIAGLSDEDKPFICTM 123
+ Y EE + E ++ +LY +R F P + ++AGL+D+ +PF+
Sbjct: 101 TALANDEHYSNGEEPRLNAENLHRYLAKMLYNRRSKFDPLWVHILVAGLNDDGRPFLGAA 160
Query: 124 DSIGAKYV 131
D +G Y
Sbjct: 161 DLLGTTYT 168
>gi|340992803|gb|EGS23358.1| putative proteasome protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 265
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 22/137 (16%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLF---------------I 51
NG + +A+ G + +A D RL + + S+ H +L+ +
Sbjct: 41 NGGSTLAIAGADFTIMAGDTRL-------TSGYSINSRYHPKLYKIGGTTADQSDATIVL 93
Query: 52 GLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAG 111
+ G A D + L +RL K+Y+ R + M + A +S +LY+KRF PY+ ++ G
Sbjct: 94 SVVGFAADGEALKERLDAICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYYAYAILGG 153
Query: 112 LSDEDKPFICTMDSIGA 128
L +E K + + D +G+
Sbjct: 154 LDEEGKGAVYSYDPVGS 170
>gi|170578154|ref|XP_001894290.1| proteasome subunit beta type 1 [Brugia malayi]
gi|158599186|gb|EDP36871.1| proteasome subunit beta type 1, putative [Brugia malayi]
Length = 258
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 1/123 (0%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLG-VQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ G A+ G N +ASD R+ ++ + D ++I ++D + + +G D L
Sbjct: 49 FEGGTTAAIAGDNFAIMASDTRMSQFEINVLTRDAEKIHVLNDSIVLSCAGFYGDILQLK 108
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L R Y+ DM + A L+S LY +RF PY+ ++AG+ + K + + D
Sbjct: 109 RLLEARLHKYRFDYRGDMTVDLCAELLSRNLYYRRFFPYYTGAILAGIDENGKGAVFSYD 168
Query: 125 SIG 127
IG
Sbjct: 169 PIG 171
>gi|312066298|ref|XP_003136204.1| proteasome subunit beta type 1 [Loa loa]
gi|307768639|gb|EFO27873.1| proteasome subunit beta type 1 [Loa loa]
Length = 258
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 1/123 (0%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLG-VQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ G A+ G N +ASD R+ ++ + D ++I ++D + + +G D L
Sbjct: 49 FEGGTTAAIAGDNFAIMASDTRMSQFEINVLTRDAEKIHVLNDSIVLSCAGFYGDVLQLK 108
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L R Y+ DM + A L+S LY +RF PY+ ++AG+ + K + + D
Sbjct: 109 RLLEARLHKYRFDYRGDMTVDLCAELLSRNLYYRRFFPYYTGAILAGIDENGKGAVFSYD 168
Query: 125 SIG 127
IG
Sbjct: 169 PIG 171
>gi|315428112|dbj|BAJ49699.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 168
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
Y G+ + + GK+ IA+++R ++ +++ KI + + +G+ D Q + +
Sbjct: 15 YPGATTLGIRGKDSVVIAAEKRFAYGYFVMSKQARKVFKISNSVGAACAGVVADMQNMIK 74
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ LY+L + + +T A ++S L+ R+ PYF + ++ G+ D P + +D
Sbjct: 75 EVTAVVNLYRLEQGVEPSVKTVAKILSWNLFGNRYFPYFMETIVGGI-DSQGPHVIVLDP 133
Query: 126 IGA 128
+G+
Sbjct: 134 LGS 136
>gi|225719280|gb|ACO15486.1| Proteasome subunit beta type-1 precursor [Caligus clemensi]
Length = 239
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRL-GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
NG + + G + IASD RL ++ + ++ ++ ++ +G G D T +
Sbjct: 33 NGGTTIGIAGPDFAVIASDTRLTSGGYDILSRNVPKVFQLSEKSVLGSCGCWCDVLTFVR 92
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ + K Y +D+ A L+S LY++RF PY+ V+AGL + + I T D
Sbjct: 93 VMESKMKNYSYTHGKDLGTPALAQLISNSLYQRRFLPYYIHNVLAGLDENGQGCIYTYDP 152
Query: 126 IG 127
+G
Sbjct: 153 VG 154
>gi|195398923|ref|XP_002058070.1| GJ15881 [Drosophila virilis]
gi|194150494|gb|EDW66178.1| GJ15881 [Drosophila virilis]
Length = 262
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 68/142 (47%), Gaps = 6/142 (4%)
Query: 4 TEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTL 63
++ NG ++A+ G+ IASD R+ L D ++ + + +GL D+ ++
Sbjct: 51 SDTNGGTVLAIAGEEFVVIASDTRICSGLSIETRDQSKVFPMTPLAMVASTGLWCDTISM 110
Query: 64 YQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTM 123
L R ++Y+ + + + A ++S ++Y +RF PY ++AG+ K +
Sbjct: 111 TSLLQIRIQMYEQEHNKPISTDALAQMISIVMYNRRFFPYHTCTILAGIDQAGKGAVYYY 170
Query: 124 DSIGA------KYVGSLQKILL 139
D +G + +GS K+LL
Sbjct: 171 DPVGHMERCRYRVLGSSGKMLL 192
>gi|159124092|gb|EDP49210.1| proteasome component Prs3, putative [Aspergillus fumigatus A1163]
Length = 261
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 12/132 (9%)
Query: 7 NGSALVAMVGKNCFAIASDRR--LGVQLQT--------IATDFQRISKIHDRLFIGLSGL 56
NG + + + G + +A D R G + + I D + H + + + G
Sbjct: 37 NGGSTLGITGSDFAILAGDTRSVAGYNINSRYVPKVFKIGGDAETGEGAH--ILLSVVGF 94
Query: 57 ATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED 116
A D Q L +RL ++Y+ + + M A +S +LY+KRF PY+ ++AGL +E
Sbjct: 95 AADGQALKERLDAVVRMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVHAILAGLDEEG 154
Query: 117 KPFICTMDSIGA 128
K + + D +G+
Sbjct: 155 KGALYSYDPVGS 166
>gi|70991375|ref|XP_750536.1| proteasome component Prs3 [Aspergillus fumigatus Af293]
gi|66848169|gb|EAL88498.1| proteasome component Prs3, putative [Aspergillus fumigatus Af293]
Length = 261
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 12/132 (9%)
Query: 7 NGSALVAMVGKNCFAIASDRR--LGVQLQT--------IATDFQRISKIHDRLFIGLSGL 56
NG + + + G + +A D R G + + I D + H + + + G
Sbjct: 37 NGGSTLGITGSDFAILAGDTRSVAGYNINSRYVPKVFKIGGDAETGEGAH--ILLSVVGF 94
Query: 57 ATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED 116
A D Q L +RL ++Y+ + + M A +S +LY+KRF PY+ ++AGL +E
Sbjct: 95 AADGQALKERLDAVVRMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVHAILAGLDEEG 154
Query: 117 KPFICTMDSIGA 128
K + + D +G+
Sbjct: 155 KGALYSYDPVGS 166
>gi|149237248|ref|XP_001524501.1| proteasome component C5 [Lodderomyces elongisporus NRRL YB-4239]
gi|146452036|gb|EDK46292.1| proteasome component C5 [Lodderomyces elongisporus NRRL YB-4239]
Length = 243
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQ 65
NG ++ + G++ +A D R V+ +I + ++ R+ + D + + +G A D L
Sbjct: 30 NGGTVLGIAGEDFAVLAGDTRQ-VEGYSIQSRYEPRVHNVGDNILMTANGFAADGVALID 88
Query: 66 RLVFRHKLYQL-REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
R K Y+ E R ++ + A + LLY KRF PY +IAGL +E K + + D
Sbjct: 89 RFKQSFKWYKFDNENRKLEISSAARYIQHLLYGKRFFPY-VSTLIAGLDEEGKGAVYSYD 147
Query: 125 SIGA 128
+G+
Sbjct: 148 PVGS 151
>gi|195173300|ref|XP_002027430.1| GL20944 [Drosophila persimilis]
gi|194113282|gb|EDW35325.1| GL20944 [Drosophila persimilis]
Length = 224
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 61/123 (49%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E NG ++A+ GK+ I D RL ++ ++ + ++ + +G D+ +L
Sbjct: 11 ENNGGTVLAIAGKDFVVIGGDTRLSSGCAILSRTQTKLCPLSKQMVVAATGCWCDAVSLT 70
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
L + + Y+ + + M E+ A ++S + Y++R PY P++ G+ + + + + D
Sbjct: 71 NLLKVKQQGYENQHHKVMSIESMAQMLSVVQYQRRHLPYNVSPILGGIDQDGQGAVFSYD 130
Query: 125 SIG 127
IG
Sbjct: 131 CIG 133
>gi|68060726|ref|XP_672353.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56489346|emb|CAI05284.1| hypothetical protein PB300285.00.0 [Plasmodium berghei]
Length = 237
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 12 VAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL---- 67
+ + G N +A D RL + + +ISKI D+ IG SG+ +D +TL+ L
Sbjct: 13 IGLTGNNYVILAGDTRLSLSYSIYTRNCPKISKITDKCIIGSSGMQSDIKTLHSLLQVLL 72
Query: 68 --------------VFRHKLYQLRE-----ERDMKP--ETFASLVSALLYEKRFGPYFCQ 106
+F K+ Q + E P A L+ LY +RF PY+
Sbjct: 73 KIFLLYNYYCCNLIIFFSKILQKKIQLFYLEHSHYPSIHVIAKLLCVTLYSRRFFPYYTF 132
Query: 107 PVIAGLSDEDKPFICTMDSIGAKY 130
++AG+ + K + + D+IG+ Y
Sbjct: 133 NILAGIDENGKGVLYSYDAIGSYY 156
>gi|375082946|ref|ZP_09729987.1| proteasome subunit beta 1 [Thermococcus litoralis DSM 5473]
gi|374742376|gb|EHR78773.1| proteasome subunit beta 1 [Thermococcus litoralis DSM 5473]
Length = 204
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 66/128 (51%), Gaps = 6/128 (4%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V +V K+ +A+D R + ++ +I +I D L + +G D +L + L
Sbjct: 6 GTTTVGIVCKDGVVLAADMRASLGNMVLSKGVSKIFQIDDHLALAGAGSVGDILSLVRLL 65
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
KLY+ R R+M + A+L S +L +R+ PYF ++AG ++KP + ++D G
Sbjct: 66 RAEAKLYRARVGREMSTKALATLTSNILSGRRYFPYFGWFLVAGY--DEKPGLYSIDMAG 123
Query: 128 A----KYV 131
KYV
Sbjct: 124 GITEDKYV 131
>gi|67539228|ref|XP_663388.1| hypothetical protein AN5784.2 [Aspergillus nidulans FGSC A4]
gi|40743687|gb|EAA62877.1| hypothetical protein AN5784.2 [Aspergillus nidulans FGSC A4]
gi|259484727|tpe|CBF81196.1| TPA: putative proteasome core component, beta 6 subunit (Eurofung)
[Aspergillus nidulans FGSC A4]
Length = 261
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHD--------RLFIGLSGLAT 58
NG +++ + GK+ +A D R + ++ KI + + + G A
Sbjct: 37 NGGSVLGITGKDFAVLAGDTRSTSGYNINSRYVPKVFKIGGEDETGKGAHILLSVVGFAA 96
Query: 59 DSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKP 118
D L +RL K+Y+ + + M A +S +LY+KRF PY+ Q ++AGL +E K
Sbjct: 97 DGLALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVQAILAGLDEEGKG 156
Query: 119 FICTMDSIGA 128
+ D +G+
Sbjct: 157 ALYGYDPVGS 166
>gi|448468124|ref|ZP_21599755.1| 20S proteasome A and B subunits [Halorubrum kocurii JCM 14978]
gi|445810867|gb|EMA60881.1| 20S proteasome A and B subunits [Halorubrum kocurii JCM 14978]
Length = 243
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + + +A+D R + + D Q++ ++H R + ++G + +Q+L L
Sbjct: 49 GTTTVGIKTADGVVMATDMRASLGGMVSSKDVQKVEEVHPRGALTIAGSVSAAQSLISTL 108
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
LY+ R +DM E ++L LL F Y QP++ G+ DE I ++D++G
Sbjct: 109 KAETSLYETRRGKDMTMEALSTLTGNLLRSGAF--YIVQPILGGVDDE-GAHIYSIDALG 165
Query: 128 A 128
Sbjct: 166 G 166
>gi|407464585|ref|YP_006775467.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
sp. AR2]
gi|407047773|gb|AFS82525.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
sp. AR2]
Length = 194
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 63/121 (52%), Gaps = 2/121 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + AS++R+ ++ ++ I +++ +GL D Q L ++
Sbjct: 3 GATAVGITFDGGVVFASEKRIAFGNFLVSKSTKKTFPITNKVGATCAGLVADMQILTLQI 62
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
K+ ++ +RD+ P T A ++S ++YE+R+ P Q ++ G+ DKP + T+D +G
Sbjct: 63 AALAKIRKMELKRDVPPNTVAKMMSNMMYERRYFPLLTQVIVGGVV--DKPIMYTLDPLG 120
Query: 128 A 128
+
Sbjct: 121 S 121
>gi|240104109|ref|YP_002960418.1| peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
gammatolerans EJ3]
gi|302595730|sp|C5A2D5.1|PSB2_THEGJ RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|239911663|gb|ACS34554.1| Peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
gammatolerans EJ3]
Length = 200
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 64/123 (52%), Gaps = 6/123 (4%)
Query: 8 GSALVAMVGKNCFAIASDRR--LGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
G+ V + K +A+D + LG ++T+ + ++I I DR+ I +G D Q L +
Sbjct: 7 GTTTVGIKVKEGVVLAADTQASLGNMVETL--NIRKILPITDRIAITTAGSVGDVQALAR 64
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
L + + YQ R M A+L+S +L E ++ PY Q +I G DKP + ++D+
Sbjct: 65 MLEAQARYYQFTWGRPMTTRAMANLLSNILNENKWFPYMVQIIIGGYV--DKPELASVDA 122
Query: 126 IGA 128
+G
Sbjct: 123 LGG 125
>gi|402585903|gb|EJW79842.1| proteasome subunit beta type [Wuchereria bancrofti]
Length = 258
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 1/123 (0%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLG-VQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ G A+ G N +ASD R+ ++ + D ++I ++D + + +G D L
Sbjct: 49 FEGGTTAAIAGDNFAIMASDTRMSQFEINILTRDAEKIHVLNDSIVLSCAGFYGDILQLK 108
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L R Y+ DM + A L+S LY +RF PY+ ++AG+ + K + + D
Sbjct: 109 RLLEARLHKYRFDYRGDMTVDLCAELLSRNLYYRRFFPYYTGAILAGIDENGKGAVFSYD 168
Query: 125 SIG 127
IG
Sbjct: 169 PIG 171
>gi|195398909|ref|XP_002058063.1| GJ15696 [Drosophila virilis]
gi|194150487|gb|EDW66171.1| GJ15696 [Drosophila virilis]
Length = 256
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 67/141 (47%), Gaps = 6/141 (4%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
+ NG ++A+ G+ IASD R+ L D ++ + + +GL D+ ++
Sbjct: 46 DTNGGTVLAIAGEEFVVIASDTRICSGLSIETRDQSKVFPMTPLAMVASTGLWCDTISMT 105
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
L R ++Y+ + + + A ++S ++Y +RF PY ++AG+ K + D
Sbjct: 106 SLLQIRIQMYEQEHNKPISTDALAQMISIVMYNRRFFPYHTCTILAGIDQAGKGAVYYYD 165
Query: 125 SIGA------KYVGSLQKILL 139
+G + +GS K+LL
Sbjct: 166 PVGHMERCRYRVLGSSGKMLL 186
>gi|448456459|ref|ZP_21595228.1| 20S proteasome A and B subunits [Halorubrum lipolyticum DSM 21995]
gi|445811935|gb|EMA61932.1| 20S proteasome A and B subunits [Halorubrum lipolyticum DSM 21995]
Length = 243
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + + +A+D R + + D Q++ ++H R + ++G + +Q L L
Sbjct: 49 GTTTVGIKTADGVVMATDMRASLGGMVSSKDVQKVEEVHPRGALTIAGSVSAAQNLISTL 108
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
LY+ R +DM E ++L LL F Y QP++ G+ DE I ++D++G
Sbjct: 109 KAETSLYETRRGKDMSMEALSTLTGNLLRSGAF--YIVQPILGGVDDE-GAHIYSIDALG 165
Query: 128 A 128
Sbjct: 166 G 166
>gi|302841986|ref|XP_002952537.1| hypothetical protein VOLCADRAFT_62543 [Volvox carteri f.
nagariensis]
gi|300262176|gb|EFJ46384.1| hypothetical protein VOLCADRAFT_62543 [Volvox carteri f.
nagariensis]
Length = 212
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 9/157 (5%)
Query: 11 LVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFR 70
+VA+ G++ +A R+ + D + ++ D++ + +G+ D + L++ L R
Sbjct: 15 VVAVAGEDYCIVAGSTRMSTGFSILTRDASMLLQLTDKVVVASAGMQADRKALHKLLQHR 74
Query: 71 HKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG--- 127
+ YQ R M A L+S LY RF P + ++AGL ++ + + D+IG
Sbjct: 75 NVTYQHNHGRAMGVSAAAQLLSNTLYYNRFFPLYTFNLVAGLDEQGRGAVYNYDAIGSYE 134
Query: 128 -AKYVGSLQKILLLLELLESLF-----MVPVRQCSSL 158
+ Y L+ +LE + VP R C +L
Sbjct: 135 RSGYFCQGSGKELIQPVLEGILRRPDVHVPFRTCMAL 171
>gi|154150927|ref|YP_001404545.1| proteasome endopeptidase complex protein [Methanoregula boonei 6A8]
gi|302595832|sp|A7I841.1|PSB_METB6 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|153999479|gb|ABS55902.1| Proteasome endopeptidase complex [Methanoregula boonei 6A8]
Length = 213
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V +V +A+++R + + +++ +I DR+ + ++G D+Q L + +
Sbjct: 11 GTTTVGLVFAGGVILATEKRATMGYMIASKRAKKVYQIADRIGMTIAGGVGDAQQLARII 70
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
LYQ+R R++ ++L+S L + R+ PY+ Q ++ G+ D+ P + ++D++G
Sbjct: 71 TVECNLYQIRRSREITVGAASTLLSNYLNQNRYFPYYVQLLVGGI-DDHGPSVYSVDAMG 129
Query: 128 A 128
Sbjct: 130 G 130
>gi|363755242|ref|XP_003647836.1| hypothetical protein Ecym_7171 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891872|gb|AET41019.1| hypothetical protein Ecym_7171 [Eremothecium cymbalariae
DBVPG#7215]
Length = 242
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 1/123 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + G++ IA D R + + ++ D + I +G A D L ++
Sbjct: 28 NGGTILGIAGEDFAVIAGDTRHTTGYSINSRNEPKVFDCGDNILISANGFAADGDALVKK 87
Query: 67 LVFRHKLYQL-REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
K Y + M ++ A + LLY KR PY+ +IAGL ++ K + + D
Sbjct: 88 FKNNLKWYHFDHNNKKMTLKSAARNIQHLLYGKRMFPYYVHTIIAGLDEDGKGAVYSFDP 147
Query: 126 IGA 128
+G+
Sbjct: 148 VGS 150
>gi|395738001|ref|XP_003777017.1| PREDICTED: proteasome subunit beta type-1 isoform 2 [Pongo abelii]
Length = 205
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
Query: 23 ASDRRLGVQLQTIATDFQ-RISKI-----HDRLFIGLSGLATDSQTLYQRLVFRHKLYQL 76
A R LG++ A Q R S D+ IG SG D TL + + R K+Y+
Sbjct: 10 APGRDLGMEPHRAAGPLQLRFSPYVFNGGTDKTVIGCSGFHGDCLTLTKIIEARLKMYKH 69
Query: 77 REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGA 128
+ M A+++S +LY +RF PY+ +I GL +E K + + D +G+
Sbjct: 70 SNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGS 121
>gi|17554384|ref|NP_498806.1| Protein PBS-6 [Caenorhabditis elegans]
gi|21903455|sp|P34286.2|PSB1_CAEEL RecName: Full=Proteasome subunit beta type-1; AltName:
Full=Proteasome subunit beta 6
gi|12276021|gb|AAG50223.1|AF303265_1 proteasome component C5 [Caenorhabditis elegans]
gi|351020646|emb|CCD62635.1| Protein PBS-6 [Caenorhabditis elegans]
Length = 258
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQ-LQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G + A+ G+N +ASD R+ + + D ++I ++D + + SG D L +
Sbjct: 51 GGSTCAISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSGFYGDVLQLKKV 110
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R Y+ DM + A L+S LY +RF PY+ ++AG+ + K + + D I
Sbjct: 111 LQSRLHKYRFDYRSDMSVDLCAELLSRNLYYRRFFPYYTGAILAGIDEHGKGAVFSYDPI 170
Query: 127 G 127
G
Sbjct: 171 G 171
>gi|281210614|gb|EFA84780.1| proteasome subunit beta type 1 [Polysphondylium pallidum PN500]
Length = 235
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRL---GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTL 63
NG ++A+ G + IA D R+ G +QT + +I ++ ++ I SG+ D+ L
Sbjct: 28 NGGTVLAIAGSDYCVIAGDTRMSDGGYGIQT--RQYTKIFQLTNKCVIATSGMQADTLAL 85
Query: 64 YQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTM 123
+RL YQ + M + +S LY+KRF PY+ ++ G+ ++ I T
Sbjct: 86 RKRLETVLSRYQKEHGKPMSTPAISQYLSNTLYQKRFFPYYTFNLVCGVDEDGVGCIWTY 145
Query: 124 DSIGA 128
D++G+
Sbjct: 146 DAVGS 150
>gi|378725413|gb|EHY51872.1| 20S proteasome subunit beta 6 [Exophiala dermatitidis NIH/UT8656]
Length = 264
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRL--GVQLQT-IATDFQRISKIHD---RLFIGLSGLATDS 60
NG + + + G + +A D R G + T A RI D R+ + + G A D
Sbjct: 42 NGGSTLGITGADFAILAGDTRSTSGYSINTRYAPKLFRIGDDGDSSSRIVLSVVGFAADG 101
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
L +RL K+Y+ + + M + A +S +LY+KRF PY+ ++ GL ++ K +
Sbjct: 102 NALKERLDAIVKMYKYQHGKPMSVKACAQRLSTILYQKRFFPYYVHAILGGLDEDGKGAL 161
Query: 121 CTMDSIGA 128
+ D +G+
Sbjct: 162 YSYDPVGS 169
>gi|448428541|ref|ZP_21584273.1| 20S proteasome A and B subunits [Halorubrum terrestre JCM 10247]
gi|448450269|ref|ZP_21592168.1| 20S proteasome A and B subunits [Halorubrum litoreum JCM 13561]
gi|448481610|ref|ZP_21604961.1| 20S proteasome A and B subunits [Halorubrum arcis JCM 13916]
gi|448507503|ref|ZP_21615014.1| 20S proteasome A and B subunits [Halorubrum distributum JCM 9100]
gi|448523281|ref|ZP_21618634.1| 20S proteasome A and B subunits [Halorubrum distributum JCM 10118]
gi|155212701|gb|ABT17422.1| proteasome beta subunit [Halorubrum sp. TP009]
gi|445676010|gb|ELZ28535.1| 20S proteasome A and B subunits [Halorubrum terrestre JCM 10247]
gi|445698458|gb|ELZ50502.1| 20S proteasome A and B subunits [Halorubrum distributum JCM 9100]
gi|445701680|gb|ELZ53656.1| 20S proteasome A and B subunits [Halorubrum distributum JCM 10118]
gi|445812121|gb|EMA62117.1| 20S proteasome A and B subunits [Halorubrum litoreum JCM 13561]
gi|445821863|gb|EMA71647.1| 20S proteasome A and B subunits [Halorubrum arcis JCM 13916]
Length = 243
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 5/122 (4%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + + +A+D R + + D Q++ +IH R + ++G + +Q L L
Sbjct: 49 GTTTVGIKADDGVVMATDMRASLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLISTL 108
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYF-CQPVIAGLSDEDKPFICTMDSI 126
LY+ R +DM E ++L LL R G +F QP++ G+ DE I ++D++
Sbjct: 109 RAETSLYEARRGKDMSMEALSTLTGNLL---RSGAFFVVQPILGGVDDE-GAHIYSIDAL 164
Query: 127 GA 128
G
Sbjct: 165 GG 166
>gi|223477879|ref|YP_002582184.1| proteasome subunit beta [Thermococcus sp. AM4]
gi|214033105|gb|EEB73933.1| Proteasome subunit beta [Thermococcus sp. AM4]
Length = 200
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 65/123 (52%), Gaps = 6/123 (4%)
Query: 8 GSALVAMVGKNCFAIASDRR--LGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
G+ V + K+ +A+D + LG ++T+ + ++I I DR+ I +G D Q L +
Sbjct: 7 GTTTVGIKVKDGVVLAADTQASLGNMVETL--NIRKILPITDRIAITTAGSVGDVQALAR 64
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
L + + YQ R M A+L+S +L E ++ PY Q +I G DKP + ++D+
Sbjct: 65 MLEAQARYYQFTWGRPMTTRAMANLLSNILNENKWFPYMVQILIGGYV--DKPELASVDA 122
Query: 126 IGA 128
+G
Sbjct: 123 LGG 125
>gi|222479043|ref|YP_002565280.1| 20S proteasome A and B subunits [Halorubrum lacusprofundi ATCC
49239]
gi|302595813|sp|B9LTS6.1|PSB_HALLT RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|222451945|gb|ACM56210.1| 20S proteasome A and B subunits [Halorubrum lacusprofundi ATCC
49239]
Length = 243
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + + +A+D R + + D Q++ ++H R + ++G + +Q L L
Sbjct: 49 GTTTVGIKTADGVVMATDMRASLGGMVSSKDVQKVEEVHPRGALTIAGSVSAAQNLISTL 108
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
LY+ R +DM E ++L LL F Y QP++ G+ DE I ++D++G
Sbjct: 109 KAETSLYETRRGKDMSMEALSTLTGNLLRSGAF--YIVQPILGGVDDE-GSHIYSIDALG 165
Query: 128 A 128
Sbjct: 166 G 166
>gi|365990732|ref|XP_003672195.1| hypothetical protein NDAI_0J00600 [Naumovozyma dairenensis CBS 421]
gi|343770970|emb|CCD26952.1| hypothetical protein NDAI_0J00600 [Naumovozyma dairenensis CBS 421]
Length = 241
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + G++ +A D R + ++ D + I +G A D + L +R
Sbjct: 27 NGGTILGIAGEDFAILAGDTRHTTDYSINSRYEPKVFDCGDNIVISANGFAADGEALVKR 86
Query: 67 LVFRHKLYQL-REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
K Y ++ + ++ A + LLY KRF PY+ +IAGL + K + + D
Sbjct: 87 FKNSLKWYHFDHNDKKLSMKSAARNIQHLLYGKRFFPYYVHTIIAGLDENGKGAVYSFDP 146
Query: 126 IGA 128
+G+
Sbjct: 147 VGS 149
>gi|169769575|ref|XP_001819257.1| proteasome component C5 [Aspergillus oryzae RIB40]
gi|238488110|ref|XP_002375293.1| proteasome component Prs3, putative [Aspergillus flavus NRRL3357]
gi|83767116|dbj|BAE57255.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220700172|gb|EED56511.1| proteasome component Prs3, putative [Aspergillus flavus NRRL3357]
Length = 261
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 12/132 (9%)
Query: 7 NGSALVAMVGKNCFAIASDRR--LGVQLQT--------IATDFQRISKIHDRLFIGLSGL 56
NG + + + G + +A D R G + + I D H + + + G
Sbjct: 37 NGGSTLGITGADFAILAGDTRSVAGYNINSRYAPKVFKIGGDDDTGEGAH--IILSVVGF 94
Query: 57 ATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED 116
A D Q L +RL K+Y+ + + M A +S +LY+KRF PY+ ++AGL +E
Sbjct: 95 AADGQALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVHAILAGLDEEG 154
Query: 117 KPFICTMDSIGA 128
K + + D +G+
Sbjct: 155 KGALYSYDPVGS 166
>gi|145520811|ref|XP_001446261.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124413738|emb|CAK78864.1| unnamed protein product [Paramecium tetraurelia]
Length = 239
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 6 YNGSALVAMVG-KNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
++ S V +G +A D RL + D ++S++ D+ + +G D L
Sbjct: 33 HDNSGTVLAIGIPGAVLVAGDTRLSNGYNILTRDATKLSQLTDKCVLATAGQYADFIALR 92
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L R +LY+ + E +T A L+S LY +RF PY+ ++AGL + + + D
Sbjct: 93 KFLQQRLQLYEFQNEVQASTQTVAHLLSRELYSRRFFPYYTFNLLAGLDENNHGVVYGYD 152
Query: 125 SIGA 128
+IG+
Sbjct: 153 AIGS 156
>gi|71725697|gb|AAZ38994.1| proteasome-like protein [Oxyuranus scutellatus]
Length = 174
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%)
Query: 44 KIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPY 103
K+ D IG SG D TL L R K+Y+ + M A+++S +LY +RF PY
Sbjct: 6 KLTDTTVIGCSGFHGDCLTLTTILEARLKMYKHSNNKIMSSGAIAAMLSTILYSRRFFPY 65
Query: 104 FCQPVIAGLSDEDKPFICTMDSIGA 128
+ +I GL +E K + + D +G+
Sbjct: 66 YVYNIIGGLDEEGKGAVYSFDPVGS 90
>gi|315427032|dbj|BAJ48649.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
gi|343485700|dbj|BAJ51354.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 201
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
Y G+ + + GK+ IA+++R ++ +++ KI + + +G+ D Q + +
Sbjct: 7 YPGATTLGIRGKDSVVIAAEKRFAYGYFVMSKQARKVFKISNSVGAACAGVVADMQNMIK 66
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ LY+L + + +T A ++S L+ R+ PYF + ++ G+ D P + +D
Sbjct: 67 EVTAVVNLYRLEQGVEPSVKTVAKILSWNLFGNRYFPYFMETIVGGI-DSQGPHVIVLDP 125
Query: 126 IGA 128
+G+
Sbjct: 126 LGS 128
>gi|312136619|ref|YP_004003956.1| proteasome endopeptidase complex subunit beta [Methanothermus
fervidus DSM 2088]
gi|311224338|gb|ADP77194.1| proteasome endopeptidase complex, beta component [Methanothermus
fervidus DSM 2088]
Length = 211
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 4 TEYNGSALVAMVGKNCFAIASDRR--LGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
+ G+ V +V K+ AS++R LG + A D +I KI + L ++G D+Q
Sbjct: 5 NNFKGTTTVGIVCKDGIVFASEKRATLGNLIAHKAVD--KIFKIDEHLATTVAGSVGDAQ 62
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
L + L +LY+LR + AS+ S +L+ R P+ Q +I G+ DE P I
Sbjct: 63 KLVEYLKAEVRLYKLRTGKPATVRAAASIASNILHASRMFPFIVQMLIGGI-DETGPKIY 121
Query: 122 TMDSIGAK 129
++D G K
Sbjct: 122 SVDPAGGK 129
>gi|50427419|ref|XP_462322.1| DEHA2G17996p [Debaryomyces hansenii CBS767]
gi|49657992|emb|CAG90828.1| DEHA2G17996p [Debaryomyces hansenii CBS767]
Length = 242
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 1/123 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + G++ +A D R V + +I + D + + +G A D L R
Sbjct: 28 NGGTVLGIAGEDFSVLAGDTRQVVGYSINSRYEPKIFDVGDDIAMTANGFAADGAALIDR 87
Query: 67 LVFRHKLYQLREE-RDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
+ K Y+ + + ++ A + LLY KRF PY+ +IAGL DE K + + D
Sbjct: 88 FRNQLKWYKFDHGGKKLSIKSAARYIQHLLYGKRFFPYYVSTLIAGLDDEGKGAVYSYDP 147
Query: 126 IGA 128
+G+
Sbjct: 148 VGS 150
>gi|406699677|gb|EKD02876.1| 20S proteasome beta-type subunit, Pre7p [Trichosporon asahii var.
asahii CBS 8904]
Length = 251
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 57/109 (52%), Gaps = 4/109 (3%)
Query: 22 IASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREE 79
IA D R G +QT +++ ++ D++ + +G A D Y+R+ R + Y+
Sbjct: 23 IAGDTRQSQGYNIQTRYA--KKVFQLTDKVVLATNGFAADGNNFYKRVKQRLEWYEANHH 80
Query: 80 RDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGA 128
+ M ++ A ++ +LY +RF PY+ ++ G+ ++ I + D +G+
Sbjct: 81 KQMSIKSIARMIQTMLYGRRFFPYYVYNILGGIEEDGTGAIYSFDPVGS 129
>gi|116206868|ref|XP_001229243.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88183324|gb|EAQ90792.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 265
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 22/137 (16%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLF---------------I 51
NG + +A+ G +A D RL + + S+ H +LF +
Sbjct: 41 NGGSTLAIAGAKFSILAGDTRL-------TSGYSINSRHHPKLFKIGGTTADQKDATMVL 93
Query: 52 GLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAG 111
+ G A D + L +RL K+Y+ R + M + A +S +LY+KRF PY+ ++ G
Sbjct: 94 SVVGFAADGEALKERLDTICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYYSHAILGG 153
Query: 112 LSDEDKPFICTMDSIGA 128
L +E + + D +G+
Sbjct: 154 LDEEGNGAVYSYDPVGS 170
>gi|333910183|ref|YP_004483916.1| proteasome subunit beta [Methanotorris igneus Kol 5]
gi|333750772|gb|AEF95851.1| proteasome endopeptidase complex, beta subunit [Methanotorris
igneus Kol 5]
Length = 216
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 64/121 (52%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V ++ + +A+D+R + + +++ KI D + + ++G D+Q L + +
Sbjct: 10 GTTTVGLICDDAVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQALVRYV 69
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
KLY++R +++ P + A+L+S +L+ R P+ Q +I G P + ++D IG
Sbjct: 70 SAEAKLYKMRTGKNIPPLSCATLISNILHGNRMFPFLTQLIIGGYDLLYGPRLFSLDPIG 129
Query: 128 A 128
Sbjct: 130 G 130
>gi|449525251|ref|XP_004169631.1| PREDICTED: proteasome subunit beta type-1-like, partial [Cucumis
sativus]
Length = 171
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%)
Query: 47 DRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQ 106
D+ + SG D + L + L RH +YQ + + M A L+S LY KRF PY+
Sbjct: 2 DKAVLASSGFQADVKALQKALSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAF 61
Query: 107 PVIAGLSDEDKPFICTMDSIGA 128
V+ GL E K + T D++G+
Sbjct: 62 NVLGGLDSEGKGCVFTYDAVGS 83
>gi|342182103|emb|CCC91582.1| proteasome beta 6 subunit [Trypanosoma congolense IL3000]
Length = 258
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 65/125 (52%), Gaps = 4/125 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIAT--DFQRISKIHDRLFIGLSGLATDSQTLY 64
NG + A+ G++ + +D RL I T D ++ ++ DR+F+ SG+ D L
Sbjct: 51 NGGTIAAIAGRDFAILGADTRLNGDF-CIHTRMDTSKLFQLTDRVFLASSGMQADRLQLQ 109
Query: 65 QRLVFRHKLYQLREE-RDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTM 123
+ L +R + Y+ + + A LVS +LY++RF PY+ +I GL ++ +
Sbjct: 110 RMLQYRIQWYRYNNGGKTPSTKAIAKLVSTVLYQRRFFPYYTFNMIVGLDEQGAGVCYSY 169
Query: 124 DSIGA 128
D++G+
Sbjct: 170 DAVGS 174
>gi|308502323|ref|XP_003113346.1| CRE-PBS-6 protein [Caenorhabditis remanei]
gi|308265647|gb|EFP09600.1| CRE-PBS-6 protein [Caenorhabditis remanei]
Length = 258
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQ-LQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G + A+ G+N +ASD R+ + + D ++I ++D + + SG D L +
Sbjct: 51 GGSTCAISGENFAIVASDTRMTQNDINILTRDAEKIHVLNDSIILTTSGFYGDVLQLKKV 110
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R Y+ DM + A L+S LY +RF PY+ ++AG+ + K + + D I
Sbjct: 111 LQSRLHKYRFDYRADMSVDLCAELLSRNLYYRRFFPYYTGAILAGIDENGKGAVFSYDPI 170
Query: 127 G 127
G
Sbjct: 171 G 171
>gi|268570354|ref|XP_002648488.1| C. briggsae CBR-PBS-6 protein [Caenorhabditis briggsae]
Length = 258
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQ-LQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G + A+ G+N +ASD R+ + + D ++I ++D + + SG D L +
Sbjct: 51 GGSTCAISGENFAIVASDTRMTQNDINILTRDAEKIHVLNDSIILTTSGFYGDVIQLKKV 110
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R Y+ DM + A L+S LY +RF PY+ ++AG+ + K + + D I
Sbjct: 111 LQSRLHKYRFDYRSDMSVDLCAELLSRNLYYRRFFPYYTGAILAGIDEHGKGAVFSYDPI 170
Query: 127 G 127
G
Sbjct: 171 G 171
>gi|340054849|emb|CCC49156.1| putative 20S proteasome beta 6 subunit [Trypanosoma vivax Y486]
gi|340054851|emb|CCC49158.1| putative 20S proteasome beta 6 subunit [Trypanosoma vivax Y486]
Length = 258
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 64/126 (50%), Gaps = 6/126 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIA-TDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
NG + A+ GK+ + D RL + D ++ ++ D +F+ +G+ D L Q
Sbjct: 51 NGGTVAAVAGKDYVILGGDTRLNGDFCIHSRNDRSKLFQLTDHVFLASTGMQADRLQLQQ 110
Query: 66 RLVFRHKLYQLREERDMKPET--FASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC-T 122
L +R + YQ ++ P T A L S +LY++RF PY+ +I GL DE +C +
Sbjct: 111 MLKYRIQWYQYNNGGEV-PSTRAIAKLTSTILYQRRFFPYYTFNMIVGL-DEKGAGVCYS 168
Query: 123 MDSIGA 128
D +G+
Sbjct: 169 YDPVGS 174
>gi|390602798|gb|EIN12190.1| proteasome subunit [Punctularia strigosozonata HHB-11173 SS5]
Length = 276
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
NG ++A+ G + IA D R G +QT ++ K+ DR + ++G A D
Sbjct: 25 NGGTILAIAGADFTVIAGDTRQSEGYNIQTRYA--PKVFKLTDRAVLAVNGFAADGNMFV 82
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE 115
+++ R + Y+ +DM A L+ +LY +RF PY+ ++ G+ ++
Sbjct: 83 KKVKQRLEWYRHAHAKDMPLHAIARLIQTMLYARRFFPYYVYNILGGIEED 133
>gi|448530387|ref|XP_003870050.1| Pre7 protein [Candida orthopsilosis Co 90-125]
gi|380354404|emb|CCG23919.1| Pre7 protein [Candida orthopsilosis]
Length = 286
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 62/124 (50%), Gaps = 3/124 (2%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQ 65
NG ++ + G++ +A D R V+ +I + ++ +I + D + + +G A D L
Sbjct: 72 NGGTVLGIAGEDFAVLAGDTRQ-VEGYSIQSRYEPKIHNVGDNILMTANGFAADGVALID 130
Query: 66 RLVFRHKLYQLRE-ERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ Y+ R ++ + A + LLY KRF PY+ +IAGL +E K + + D
Sbjct: 131 KFKQSFTWYKFDNGNRKLEISSAARYIQHLLYGKRFFPYYVSTLIAGLDEEGKGAVYSYD 190
Query: 125 SIGA 128
+G+
Sbjct: 191 PVGS 194
>gi|337284212|ref|YP_004623686.1| proteasome subunit beta [Pyrococcus yayanosii CH1]
gi|334900146|gb|AEH24414.1| proteasome beta subunit precursor [Pyrococcus yayanosii CH1]
Length = 204
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 73/148 (49%), Gaps = 6/148 (4%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
++ G+ V +V ++ +A+DRR + A + +I +I +RL I +G D +L
Sbjct: 4 KFKGTTTVGIVCRDGVVLAADRRASLGNMVYAKNVTKIYQIDERLAIAGAGNVGDILSLV 63
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L +LY+ R R M + A+L++ +L R+ PY ++ G +D P + ++D
Sbjct: 64 RLLRAEVRLYRSRVGRSMSAKALATLLANILNGTRYFPYLVWFLVGGY--DDAPRLYSVD 121
Query: 125 SIGA----KYVGSLQKILLLLELLESLF 148
G KYV + + +L+S +
Sbjct: 122 MAGGITEDKYVAAGSGMEFAFSILDSQY 149
>gi|341581964|ref|YP_004762456.1| proteasome subunit beta 1 [Thermococcus sp. 4557]
gi|340809622|gb|AEK72779.1| proteasome subunit beta 1 [Thermococcus sp. 4557]
Length = 203
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 2/122 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ V +V K+ +A+DRR + ++ + ++ I D L + +G D +L +
Sbjct: 6 KGTTTVGIVCKDGVVLAADRRASLGNMVLSENVTKVFWIDDHLALAGAGSVGDILSLVRL 65
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L KLY+ + ++M + A+L S +L+ RF PYF +IAG + E P + ++D
Sbjct: 66 LRAEAKLYRAKVGKEMSVKALATLTSNVLHGSRFMPYFGWFLIAGHTGE--PGLYSVDMA 123
Query: 127 GA 128
G
Sbjct: 124 GG 125
>gi|444728635|gb|ELW69084.1| Proteasome subunit beta type-1 [Tupaia chinensis]
Length = 283
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL +
Sbjct: 35 FNGGTVLAIAGEDFSIVASDTRLSEGFSVHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTK 94
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRF 100
+ R K+Y+ + M A+++S +LY +RF
Sbjct: 95 IIEARLKMYKHSNNKAMTTGAVAAMLSTILYSRRF 129
>gi|365762155|gb|EHN03761.1| Pre7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 241
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQ 65
NG ++ + G++ +A D R + +I + ++ ++ D L + +G A D L +
Sbjct: 27 NGGTILGIAGEDFAVLAGDTR-NITDYSINSRYEPKVFDCGDNLVVSANGFAADGDALVK 85
Query: 66 RLVFRHKLYQL-REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
R K Y ++ + + A + LLY KRF PY+ +IAGL + K + + D
Sbjct: 86 RFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDENGKGAVYSFD 145
Query: 125 SIGA 128
+G+
Sbjct: 146 PVGS 149
>gi|448105494|ref|XP_004200509.1| Piso0_003099 [Millerozyma farinosa CBS 7064]
gi|448108619|ref|XP_004201140.1| Piso0_003099 [Millerozyma farinosa CBS 7064]
gi|359381931|emb|CCE80768.1| Piso0_003099 [Millerozyma farinosa CBS 7064]
gi|359382696|emb|CCE80003.1| Piso0_003099 [Millerozyma farinosa CBS 7064]
Length = 241
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 1/123 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG ++ + G++ +A D R V + R+ + D + + +G + D L +
Sbjct: 27 NGGTVLGIAGEDFAVLAGDTRQVVGYSINSRYEPRVFDVGDNILMTANGFSADGNALINK 86
Query: 67 LVFRHKLYQLREE-RDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
K Y+ + + ++ A + LLY KRF P++ +IAGL+DE K + + D
Sbjct: 87 FKNSLKWYKFDHGGKKLSIKSAARYIQHLLYGKRFFPFYVSTLIAGLNDEGKGVVYSYDP 146
Query: 126 IGA 128
+G+
Sbjct: 147 VGS 149
>gi|256810347|ref|YP_003127716.1| proteasome endopeptidase complex subunit beta [Methanocaldococcus
fervens AG86]
gi|302595745|sp|C7P6N4.1|PSB_METFA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|256793547|gb|ACV24216.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
fervens AG86]
Length = 224
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 64/121 (52%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V ++ + +A+D+R + + +++ KI D + + ++G D+Q + + L
Sbjct: 6 GTTTVGLICDDAVILATDKRASMGNLVADKEAKKLYKIDDYIALTIAGSVGDAQAIVRLL 65
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
KLY++R +++ P A+L+S +L+ R+ P+ Q +I G + + ++D +G
Sbjct: 66 TAEAKLYKMRTGKNISPLACATLLSNILHSNRYFPFLTQLIIGGYDLLEGAKLFSLDPLG 125
Query: 128 A 128
Sbjct: 126 G 126
>gi|325958081|ref|YP_004289547.1| proteasome endopeptidase complex subunit beta [Methanobacterium sp.
AL-21]
gi|325329513|gb|ADZ08575.1| proteasome endopeptidase complex, beta subunit [Methanobacterium
sp. AL-21]
Length = 210
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 1/121 (0%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + K+ A++RR + +I KI D + ++G +D+Q L +
Sbjct: 9 GTTTVGVTCKDGIVFATERRASMGNLIAHKVADKIFKIDDHIGATIAGSVSDAQKLMGYI 68
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
LY+LR M E A++ S +L+ RF PY+ Q ++ G+ DE P + ++D G
Sbjct: 69 SAEVALYRLRNGAPMSVEAAANMTSNILHASRFYPYYVQTLLGGV-DEKGPALFSLDPSG 127
Query: 128 A 128
Sbjct: 128 G 128
>gi|71654519|ref|XP_815877.1| proteasome beta 6 subunit [Trypanosoma cruzi strain CL Brener]
gi|70880966|gb|EAN94026.1| proteasome beta 6 subunit, putative [Trypanosoma cruzi]
Length = 246
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 6/126 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQ 65
NG + A+ GKN + D RL A D + ++ ++ + F+ +G+ D L Q
Sbjct: 39 NGGTIAAIAGKNYVILGGDTRLNGDFCIHARDDRTKLFQLTEHTFLASTGMQADRLQLQQ 98
Query: 66 RLVFRHKLYQLREERDMKPET--FASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC-T 122
L +R + YQ + P T A L S +LY++RF PY+ ++ GL DE +C +
Sbjct: 99 MLKYRIQWYQYNNGGKL-PSTKAIAKLTSTMLYQRRFFPYYTFNMVVGL-DEKGAGVCYS 156
Query: 123 MDSIGA 128
D +G+
Sbjct: 157 YDPVGS 162
>gi|71655250|ref|XP_816231.1| proteasome beta 6 subunit [Trypanosoma cruzi strain CL Brener]
gi|70881343|gb|EAN94380.1| proteasome beta 6 subunit, putative [Trypanosoma cruzi]
Length = 246
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 6/126 (4%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQ 65
NG + A+ GKN + D RL A D + ++ ++ + F+ +G+ D L Q
Sbjct: 39 NGGTIAAIAGKNYVILGGDTRLNGDFCIHARDDRTKLFQLTEHTFLASTGMQADRLQLQQ 98
Query: 66 RLVFRHKLYQLREERDMKPET--FASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC-T 122
L +R + YQ + P T A L S +LY++RF PY+ ++ GL DE +C +
Sbjct: 99 MLKYRIQWYQYNNGGKL-PSTKAIAKLTSTMLYQRRFFPYYTFNMVVGL-DEKGAGVCYS 156
Query: 123 MDSIGA 128
D +G+
Sbjct: 157 YDPVGS 162
>gi|15669422|ref|NP_248232.1| proteasome subunit beta PsmB [Methanocaldococcus jannaschii DSM
2661]
gi|2499838|sp|Q58634.1|PSB_METJA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|1591869|gb|AAB99241.1| proteasome, subunit beta (psmB) [Methanocaldococcus jannaschii DSM
2661]
Length = 224
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 57/104 (54%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V ++ + +A+D+R + + +++ KI D + + ++G D+Q + + L
Sbjct: 6 GTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLL 65
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAG 111
+ KLY++R R++ P A+L+S +L+ R P+ Q +I G
Sbjct: 66 IAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGG 109
>gi|126274560|ref|XP_001387579.1| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|126213449|gb|EAZ63556.1| proteasome subunit [Scheffersomyces stipitis CBS 6054]
Length = 242
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 64/124 (51%), Gaps = 3/124 (2%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQ 65
NG ++ + G++ +A D R V+ +I + +Q ++ + D + + +G A D L
Sbjct: 28 NGGTVLGIAGEDFAVLAGDTRQ-VEGYSIQSRYQPKVFNVGDDIVMTANGFAADGAALID 86
Query: 66 RLVFRHKLYQLREE-RDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
R + + Y+ + + ++ A + LLY KRF PY+ +IAGL +E K + + D
Sbjct: 87 RFKNQLQWYKFDHGGKKLNIKSAARYIQHLLYGKRFFPYYVSTLIAGLDEEGKGAVYSYD 146
Query: 125 SIGA 128
+G+
Sbjct: 147 PVGS 150
>gi|125564290|gb|EAZ09670.1| hypothetical protein OsI_31953 [Oryza sativa Indica Group]
Length = 178
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%)
Query: 45 IHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYF 104
I D+ + SG D + L++ L R LYQ + + M A L+S LY KRF PY+
Sbjct: 7 IADKCALASSGFQGDIKALHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYY 66
Query: 105 CQPVIAGLSDEDKPFICTMDSIGA 128
V+ GL E K + T D++G+
Sbjct: 67 AFNVLGGLDSEGKGCVFTYDAVGS 90
>gi|378754633|gb|EHY64663.1| hypothetical protein NERG_02282 [Nematocida sp. 1 ERTm2]
Length = 242
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 56/122 (45%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
N +++VG + +ASD R + + R + +G DS+ ++ +
Sbjct: 35 NSGTSLSIVGADFCVVASDTRHSAMYNINTRQATKSFCLDGRFILSTTGFYADSRYIFSK 94
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L + YQ + + M E A+L+ LLY RF P F + G ++ ++P I + D +
Sbjct: 95 LAYEIDKYQFKYNKKMAIEQAAALLHVLLYTHRFFPKFTYCCLVGFNENNEPKIFSYDPV 154
Query: 127 GA 128
G+
Sbjct: 155 GS 156
>gi|401887735|gb|EJT51714.1| 20S proteasome beta-type subunit, Pre7p [Trichosporon asahii var.
asahii CBS 2479]
Length = 251
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 57/109 (52%), Gaps = 4/109 (3%)
Query: 22 IASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREE 79
IA D R G +QT +++ ++ D++ + +G A D Y+R+ R + Y+
Sbjct: 23 IAGDTRQSQGYNIQTRYA--KKVFQLTDKVVLATNGFAADGNNFYKRVKQRLEWYEANHH 80
Query: 80 RDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGA 128
+ M ++ A ++ +LY +RF PY+ ++ G+ ++ + + D +G+
Sbjct: 81 KQMSIKSIARMIQTMLYGRRFFPYYVYNILGGIEEDGTGAVYSFDPVGS 129
>gi|414589907|tpg|DAA40478.1| TPA: hypothetical protein ZEAMMB73_835212 [Zea mays]
Length = 188
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%)
Query: 44 KIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPY 103
K+ D+ + SG D + L + L R LYQ + + M A L+S LY KRF PY
Sbjct: 16 KLADKCVLASSGFQGDIKALQKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPY 75
Query: 104 FCQPVIAGLSDEDKPFICTMDSIGA 128
+ V+ GL E K + T D++G+
Sbjct: 76 YAFNVLGGLDSEGKGCVFTYDAVGS 100
>gi|448445494|ref|ZP_21590392.1| 20S proteasome A and B subunits [Halorubrum saccharovorum DSM 1137]
gi|445685018|gb|ELZ37380.1| 20S proteasome A and B subunits [Halorubrum saccharovorum DSM 1137]
Length = 243
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + + +A+D R + + D Q++ ++H R + ++G + +Q L L
Sbjct: 49 GTTTVGIKTADGVVMATDMRASLGGMVSSKDVQKVEEVHPRGALTIAGSVSAAQHLISTL 108
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
LY+ R +DM E ++L LL F Y QP++ G+ DE I ++D++G
Sbjct: 109 KAETSLYETRRGKDMSMEALSTLTGNLLRSGAF--YIVQPILGGVDDE-GAHIYSIDALG 165
Query: 128 A 128
Sbjct: 166 G 166
>gi|386876203|ref|ZP_10118332.1| putative proteasome endopeptidase complex, beta subunit [Candidatus
Nitrosopumilus salaria BD31]
gi|386805984|gb|EIJ65474.1| putative proteasome endopeptidase complex, beta subunit [Candidatus
Nitrosopumilus salaria BD31]
Length = 194
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + AS++R+ ++ ++ I ++ +GL D Q L ++
Sbjct: 3 GATAVGITFDGGVVFASEKRIAFGNFLVSKSTKKTFPITSQVGATCAGLVADMQILTLQI 62
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
K+ ++ +RD+ P T A ++S ++YE+R+ P Q ++ G+ DKP + T+D +G
Sbjct: 63 AALAKIRKMELKRDVPPNTIAKMMSNMMYERRYFPLLTQVIVGGVV--DKPIMYTLDPLG 120
Query: 128 A 128
+
Sbjct: 121 S 121
>gi|354547791|emb|CCE44526.1| hypothetical protein CPAR2_403290 [Candida parapsilosis]
Length = 244
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 62/124 (50%), Gaps = 3/124 (2%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQ 65
NG ++ + G++ +A D R V+ +I + ++ +I + D + + +G A D L
Sbjct: 30 NGGTVLGIAGEDFAVLAGDTRQ-VEGYSIQSRYEPKIHNVGDNILMTANGFAADGVALLD 88
Query: 66 RLVFRHKLYQLRE-ERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ Y+ R ++ + A + LLY KRF PY+ +IAGL +E K + + D
Sbjct: 89 KFKQAFTWYKFDNGNRKLEISSAARYIQHLLYGKRFFPYYVSTLIAGLDEEGKGAVYSYD 148
Query: 125 SIGA 128
+G+
Sbjct: 149 PVGS 152
>gi|258564630|ref|XP_002583060.1| proteasome component C5 [Uncinocarpus reesii 1704]
gi|237908567|gb|EEP82968.1| proteasome component C5 [Uncinocarpus reesii 1704]
Length = 259
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIH-------DRLFIGLSGLAT 58
NG + + + G N +A D R V I T F ++ KI + + + G +
Sbjct: 36 NGGSTLGITGPNFAILAGDTR-SVSGYNINTRFAPKVFKIGADDAGEGGHIILSVVGFSA 94
Query: 59 DSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKP 118
D Q L +RL K+Y+ + M + A +S +LY KRF PY+ ++ GL ++ K
Sbjct: 95 DGQALKERLDAIVKMYEYHHGKPMSVKACAQRLSTILYSKRFFPYYVHAILGGLDEDGKG 154
Query: 119 FICTMDSIGA 128
+ + D +G+
Sbjct: 155 ALYSYDPVGS 164
>gi|18976531|ref|NP_577888.1| multicatalytic endopeptidase complex beta subunit [Pyrococcus
furiosus DSM 3638]
gi|397652128|ref|YP_006492709.1| proteasome subunit beta [Pyrococcus furiosus COM1]
gi|74552258|sp|Q8U4C9.1|PSB1_PYRFU RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|18892084|gb|AAL80283.1| proteasome, subunit beta (multicatalytic endopeptidase complex beta
subunit) [Pyrococcus furiosus DSM 3638]
gi|393189719|gb|AFN04417.1| proteasome subunit beta [Pyrococcus furiosus COM1]
Length = 196
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + K+ +A+D + + + ++I I DR+ I +G D Q L + L
Sbjct: 6 GTTTVGIKVKDGVVLAADTQASLDHMVETLNIKKIIPITDRIAITTAGSVGDVQMLARYL 65
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+ Y R M + A+L+S +L E R+ PY Q +I G DE P I +D G
Sbjct: 66 EAEARYYYFTWGRPMTTKAMANLLSNILNENRWFPYLVQIIIGGYVDE--PTIANLDPFG 123
Query: 128 A 128
Sbjct: 124 G 124
>gi|374636366|ref|ZP_09707939.1| proteasome endopeptidase complex, beta subunit [Methanotorris
formicicus Mc-S-70]
gi|373559248|gb|EHP85553.1| proteasome endopeptidase complex, beta subunit [Methanotorris
formicicus Mc-S-70]
Length = 220
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 64/121 (52%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V ++ + +A+D+R + + +++ KI D + + ++G D+Q L + +
Sbjct: 10 GTTTVGLICDDAVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQALVRYV 69
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
KLY++R +++ P + A+L+S +L+ R P+ Q +I G P + ++D +G
Sbjct: 70 SAEAKLYKMRTGKNIPPLSCATLMSNILHGSRMFPFLTQLIIGGYDFLYGPRLFSLDPVG 129
Query: 128 A 128
Sbjct: 130 G 130
>gi|341897234|gb|EGT53169.1| CBN-PBS-6 protein [Caenorhabditis brenneri]
Length = 258
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQ-LQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G + A+ G+N +ASD R+ + + D ++I ++D + + SG D L +
Sbjct: 51 GGSTCAIAGENFAIVASDTRMTQNDINILTRDAEKIHVLNDSIVLTTSGFYGDVIQLKKV 110
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L R Y+ DM + A L++ LY +RF PY+ ++AG+ + K + + D I
Sbjct: 111 LQSRLHKYRFDYRADMSVDLCAELLARNLYYRRFFPYYTGAILAGIDENGKGAVFSYDPI 170
Query: 127 G 127
G
Sbjct: 171 G 171
>gi|14520445|ref|NP_125920.1| proteasome, subunit beta [Pyrococcus abyssi GE5]
gi|74558522|sp|Q9V247.1|PSB1_PYRAB RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|5457660|emb|CAB49151.1| psmB proteasome, subunit beta [Pyrococcus abyssi GE5]
gi|380740969|tpe|CCE69603.1| TPA: proteasome, subunit beta [Pyrococcus abyssi GE5]
Length = 197
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + K+ +A+D + + + ++I I DR+ I +G D Q + + L
Sbjct: 6 GTTTVGIRVKDGVILAADTQASLDHMVETLNIRKIIPITDRIAITTAGSVGDVQMIARIL 65
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+ YQ R M A+L+S +L E ++ PY Q +I G DE P I +D +G
Sbjct: 66 EAEARYYQFTWGRPMTTRAMANLLSNILNENKWFPYLVQIIIGGYVDE--PTIANLDPLG 123
Query: 128 A 128
Sbjct: 124 G 124
>gi|161528202|ref|YP_001582028.1| proteasome endopeptidase complex protein [Nitrosopumilus maritimus
SCM1]
gi|302595718|sp|A9A4A1.1|PSB1_NITMS RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|160339503|gb|ABX12590.1| Proteasome endopeptidase complex [Nitrosopumilus maritimus SCM1]
Length = 198
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + AS++R+ ++ ++ I ++ +GL D Q L ++
Sbjct: 7 GATAVGITFDGGVVFASEKRIAFGNFLVSKTTKKTFPITPKVGATCAGLVADMQILSLQI 66
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
K+ ++ +RD+ P T A ++S ++YE+R+ P Q ++ G+ DKP + T+D +G
Sbjct: 67 AALAKIRKMELKRDVPPNTVAKMMSNMMYERRYFPLLTQVIVGGVV--DKPIMYTLDPLG 124
Query: 128 A 128
+
Sbjct: 125 S 125
>gi|242398879|ref|YP_002994303.1| Proteasome subunit beta precursor [Thermococcus sibiricus MM 739]
gi|302595703|sp|C6A2V9.1|PSB1_THESM RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|242265272|gb|ACS89954.1| Proteasome subunit beta precursor [Thermococcus sibiricus MM 739]
Length = 207
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 68/134 (50%), Gaps = 6/134 (4%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
++ + G+ V +V K+ + +DRR + I+ +I ++ D L + +G D
Sbjct: 3 ALDKIKGTTTVGIVCKDGVVLTADRRASLGNMVISKGVTKIFQVDDHLALAGAGAVGDIL 62
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
+L + L KLY+ + ++M + A+L S +L +++ PYF +I G ++KP +
Sbjct: 63 SLVRALRAESKLYRAKVGKEMSTKALATLTSNILSGRKYLPYFGWFLIGGY--DEKPSLY 120
Query: 122 TMDSIGA----KYV 131
++D G KYV
Sbjct: 121 SIDMAGGITEDKYV 134
>gi|222445334|ref|ZP_03607849.1| hypothetical protein METSMIALI_00962 [Methanobrevibacter smithii
DSM 2375]
gi|261350105|ref|ZP_05975522.1| proteasome subunit beta [Methanobrevibacter smithii DSM 2374]
gi|222434899|gb|EEE42064.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanobrevibacter smithii DSM 2375]
gi|288860891|gb|EFC93189.1| proteasome subunit beta [Methanobrevibacter smithii DSM 2374]
Length = 204
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 4/121 (3%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + K+ AS+RR + ++I KI+D + ++G D+Q L + +
Sbjct: 8 GTTTVGITCKDGVVFASERRASMGNLVAHKVAEKIFKINDHIVTTIAGSVGDAQNLMKII 67
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
LYQ+R M + AS+ + +L R GP + Q ++ G+ D DKP + ++D G
Sbjct: 68 EAEVSLYQMRNNDKMSVKAAASVTANIL---RSGPMYVQTLLGGM-DGDKPSLYSLDPAG 123
Query: 128 A 128
Sbjct: 124 G 124
>gi|449704101|gb|EMD44406.1| proteasome beta subunit, putative [Entamoeba histolytica KU27]
Length = 225
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 4/147 (2%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E N V + G++ IASD R+ + + +I + + SG+ D + L
Sbjct: 24 EDNCGTCVVIKGEDFVVIASDTRMSRDYMILTRNDSKIYPLTSKCVFTGSGMRADIKELT 83
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
++ K Y+ ++M E+ A ++S LY RF PY+ ++AG++ + K D
Sbjct: 84 DQIKAHIKNYKYENGKEMSTESVAQVLSNTLYSHRFFPYYSFSLLAGINSKGKAVTYNYD 143
Query: 125 SIGA----KYVGSLQKILLLLELLESL 147
++G+ KY S L LL+SL
Sbjct: 144 AVGSFEERKYSCSGSGEELAYPLLDSL 170
>gi|126465830|ref|YP_001040939.1| 20S proteasome subunits A/B [Staphylothermus marinus F1]
gi|302595722|sp|A3DN21.1|PSB1_STAMF RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|126014653|gb|ABN70031.1| 20S proteasome, A and B subunits [Staphylothermus marinus F1]
Length = 213
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 5/118 (4%)
Query: 18 NCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLR 77
N IA ++RL ++ + +++ I + IG +GL D+Q + + L + Y+L+
Sbjct: 27 NGVVIAGEKRLTYDGYVLSKNTRKVHPITKHVGIGFAGLVGDAQFIIRALRMEAENYELQ 86
Query: 78 EERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGA----KYV 131
R+++ A ++S +LY + P + V+ G DE P I +D +G+ KYV
Sbjct: 87 LGREIRVRGLAKILSLILYSYKLAPLMTEVVVGGF-DEKGPQIYVLDPVGSLIEDKYV 143
>gi|407462234|ref|YP_006773551.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
koreensis AR1]
gi|407045856|gb|AFS80609.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
koreensis AR1]
Length = 194
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + AS++R+ ++ ++ I ++ +GL D Q L ++
Sbjct: 3 GATAVGITFDGGVVFASEKRIAFGNFLVSKTTKKTFPITPKVGATCAGLVADMQILSLQI 62
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
K+ ++ +RD+ P T A ++S ++YE+R+ P Q ++ G+ DKP + T+D +G
Sbjct: 63 AALAKIRKMELKRDVPPNTVAKMMSNMMYERRYFPLLTQVIVGGVV--DKPIMYTLDPLG 120
Query: 128 A 128
+
Sbjct: 121 S 121
>gi|403412828|emb|CCL99528.1| predicted protein [Fibroporia radiculosa]
Length = 252
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
NG ++A+ G + IA D R G +QT ++ ++ +R + ++G A D
Sbjct: 20 NGGTILAIAGADFTVIAGDTRQSEGYSIQTRYA--PKVFRLTERAVLAVNGFAADGNMFV 77
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+++ R + Y+ ++M A L+ +LY +RF PY+ ++ G+ ++ + + D
Sbjct: 78 KKVKQRLEWYRHAHAKEMPLRAIARLIQTMLYAQRFFPYYVYNILGGIEEDGSGAVYSFD 137
Query: 125 SIGA 128
+G+
Sbjct: 138 PVGS 141
>gi|401838704|gb|EJT42186.1| PRE7-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 241
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQ 65
NG ++ + G++ +A D R + +I + ++ ++ D L + +G A D L +
Sbjct: 27 NGGTILGIAGEDFAVLAGDTR-NITDYSINSRYEPKVFDCGDNLVMSANGFAADGDALVK 85
Query: 66 RLVFRHKLYQL-REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
R K Y ++ + + A + LLY KRF PY+ +IAGL + K + + D
Sbjct: 86 RFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDENGKGAVYSFD 145
Query: 125 SIGA 128
+G+
Sbjct: 146 PVGS 149
>gi|167393146|ref|XP_001740446.1| proteasome subunit beta type-1 [Entamoeba dispar SAW760]
gi|165895460|gb|EDR23141.1| proteasome subunit beta type-1, putative [Entamoeba dispar SAW760]
Length = 221
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 4/147 (2%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E N V + G++ +ASD R+ + + +I + + SG+ D + L
Sbjct: 20 EDNCGTCVVIKGEDFVVVASDTRMSRDYMILTRNDSKIYPLTSKCIFTGSGMRADMKELT 79
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
++ K Y+ ++M E+ A ++S LY RF PY+ ++AG++ + K D
Sbjct: 80 DQIKAHIKNYKYENGKEMSTESVAQVLSNTLYSHRFFPYYSFSLLAGINSKGKAVTYNYD 139
Query: 125 SIGA----KYVGSLQKILLLLELLESL 147
++G+ KY S L LL+SL
Sbjct: 140 AVGSFEERKYSCSGSGEELAYPLLDSL 166
>gi|260941638|ref|XP_002614985.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238851408|gb|EEQ40872.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 241
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 3/124 (2%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQ 65
NG ++ + G++ +A D R+ V I + ++ +I + D + + +G A D L
Sbjct: 27 NGGTVLGIAGEDFAVLAGDTRI-VSGYNIDSRYEPKIFDVGDNIVMTANGFAADGAALID 85
Query: 66 RLVFRHKLYQL-REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ K Y+ + + + A + LLY KRF PY+ +IAGL +E K + + D
Sbjct: 86 QFRSSFKWYKFDHNNKKLTIRSAARYIQHLLYGKRFFPYYVSTLIAGLDEEGKGAVYSYD 145
Query: 125 SIGA 128
+G+
Sbjct: 146 PVGS 149
>gi|67475302|ref|XP_653346.1| proteasome beta subunit [Entamoeba histolytica HM-1:IMSS]
gi|56470287|gb|EAL47959.1| proteasome beta subunit, putative [Entamoeba histolytica HM-1:IMSS]
Length = 226
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 4/147 (2%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E N V + G++ IASD R+ + + +I + + SG+ D + L
Sbjct: 25 EDNCGTCVVIKGEDFVVIASDTRMSRDYMILTRNDSKIYPLTSKCVFTGSGMRADIKELT 84
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
++ K Y+ ++M E+ A ++S LY RF PY+ ++AG++ + K D
Sbjct: 85 DQIKAHIKNYKYENGKEMSTESVAQVLSNTLYSHRFFPYYSFSLLAGINSKGKAVTYNYD 144
Query: 125 SIGA----KYVGSLQKILLLLELLESL 147
++G+ KY S L LL+SL
Sbjct: 145 AVGSFEERKYSCSGSGEELAYPLLDSL 171
>gi|355571914|ref|ZP_09043122.1| proteasome endopeptidase complex, beta subunit [Methanolinea tarda
NOBI-1]
gi|354825010|gb|EHF09245.1| proteasome endopeptidase complex, beta subunit [Methanolinea tarda
NOBI-1]
Length = 213
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ V +V ++ +AS+ R + + ++I +I DR+ + +G D+Q + +
Sbjct: 10 TGTTTVGLVLRDAVVLASEMRATMGYLIASKKAKKIYQIADRIGMTTAGGVGDAQQIARL 69
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
+ LYQ+R R + A+L+S +L R+ P++ Q ++ G+ DE P + +D++
Sbjct: 70 MTVECSLYQIRRGRPITIGAVATLLSNILNANRYYPFYVQLLVGGV-DEGGPKLYAVDAL 128
Query: 127 GA 128
G
Sbjct: 129 GG 130
>gi|3114281|pdb|1RYP|M Chain M, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|3114295|pdb|1RYP|1 Chain 1, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|11513424|pdb|1G65|L Chain L, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|11513438|pdb|1G65|Z Chain Z, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|14488817|pdb|1FNT|M Chain M, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|14488831|pdb|1FNT|AA Chain a, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|20150388|pdb|1JD2|L Chain L, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|20150395|pdb|1JD2|S Chain S, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|75765711|pdb|1Z7Q|M Chain M, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|75765725|pdb|1Z7Q|AA Chain a, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|93279379|pdb|2F16|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|93279393|pdb|2F16|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|99032213|pdb|2FAK|L Chain L, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|99032227|pdb|2FAK|Z Chain Z, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|112490854|pdb|2GPL|L Chain L, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|112490868|pdb|2GPL|Z Chain Z, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|190016378|pdb|3D29|L Chain L, Proteasome Inhibition By Fellutamide B
gi|190016392|pdb|3D29|Z Chain Z, Proteasome Inhibition By Fellutamide B
gi|197725332|pdb|3E47|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|197725346|pdb|3E47|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|211939223|pdb|3DY3|L Chain L, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939237|pdb|3DY3|Z Chain Z, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939251|pdb|3DY4|L Chain L, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|211939265|pdb|3DY4|Z Chain Z, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|238828248|pdb|3GPJ|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|238828262|pdb|3GPJ|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|258588332|pdb|3GPT|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588346|pdb|3GPT|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588360|pdb|3GPW|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588374|pdb|3GPW|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588554|pdb|3HYE|L Chain L, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|258588568|pdb|3HYE|Z Chain Z, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|298508234|pdb|1VSY|M Chain M, Proteasome Activator Complex
gi|298508248|pdb|1VSY|1 Chain 1, Proteasome Activator Complex
gi|298508450|pdb|3L5Q|Q Chain Q, Proteasome Activator Complex
gi|298508464|pdb|3L5Q|3 Chain 3, Proteasome Activator Complex
gi|330689392|pdb|3MG4|L Chain L, Structure Of Yeast 20s Proteasome With Compound 1
gi|330689406|pdb|3MG4|Z Chain Z, Structure Of Yeast 20s Proteasome With Compound 1
gi|333361155|pdb|3MG0|L Chain L, Structure Of Yeast 20s Proteasome With Bortezomib
gi|333361169|pdb|3MG0|Z Chain Z, Structure Of Yeast 20s Proteasome With Bortezomib
gi|335892352|pdb|3OKJ|L Chain L, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|335892366|pdb|3OKJ|Z Chain Z, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|340780430|pdb|3OEU|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780444|pdb|3OEU|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780458|pdb|3OEV|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|340780472|pdb|3OEV|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|350610683|pdb|3TDD|L Chain L, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|350610697|pdb|3TDD|Z Chain Z, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|359545857|pdb|3SHJ|L Chain L, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|359545871|pdb|3SHJ|Z Chain Z, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|378792252|pdb|3UN4|L Chain L, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792266|pdb|3UN4|Z Chain Z, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792286|pdb|3UN8|L Chain L, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|378792300|pdb|3UN8|Z Chain Z, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|390980827|pdb|3SDI|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980841|pdb|3SDI|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980855|pdb|3SDK|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|390980869|pdb|3SDK|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|402550743|pdb|4GK7|L Chain L, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|402550757|pdb|4GK7|Z Chain Z, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|403072203|pdb|4G4S|M Chain M, Structure Of Proteasome-Pba1-Pba2 Complex
gi|409973871|pdb|4FZC|L Chain L, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973885|pdb|4FZC|Z Chain Z, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973899|pdb|4FZG|L Chain L, 20s Yeast Proteasome In Complex With Glidobactin
gi|409973913|pdb|4FZG|Z Chain Z, 20s Yeast Proteasome In Complex With Glidobactin
gi|444302350|pdb|4INR|L Chain L, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302364|pdb|4INR|Z Chain Z, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302378|pdb|4INT|L Chain L, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302392|pdb|4INT|Z Chain Z, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302406|pdb|4INU|L Chain L, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
gi|444302420|pdb|4INU|Z Chain Z, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
Length = 222
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 61/124 (49%), Gaps = 3/124 (2%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQ 65
NG ++ + G++ +A D R + +I + ++ ++ D + + +G A D L +
Sbjct: 8 NGGTILGIAGEDFAVLAGDTR-NITDYSINSRYEPKVFDCGDNIVMSANGFAADGDALVK 66
Query: 66 RLVFRHKLYQL-REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
R K Y ++ + + A + LLY KRF PY+ +IAGL ++ K + + D
Sbjct: 67 RFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDEDGKGAVYSFD 126
Query: 125 SIGA 128
+G+
Sbjct: 127 PVGS 130
>gi|320101454|ref|YP_004177046.1| proteasome endopeptidase complex subunit beta [Desulfurococcus
mucosus DSM 2162]
gi|319753806|gb|ADV65564.1| proteasome endopeptidase complex, beta component [Desulfurococcus
mucosus DSM 2162]
Length = 209
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 60/114 (52%), Gaps = 5/114 (4%)
Query: 22 IASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERD 81
+A+++RL ++ + ++I + D + +G +GL D L + L K Y+L+ R+
Sbjct: 21 LAAEKRLSYDGFVLSRNARKIHMVTDHVGVGFAGLMGDVGFLVKVLRLEAKNYELQHGRE 80
Query: 82 MKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGA----KYV 131
++ + A L+S +LY + P + V+ G DE P + +D +G+ KYV
Sbjct: 81 IRARSMAKLLSLILYNYKLAPMLTEVVVGGFDDEG-PSLYILDPVGSLIEEKYV 133
>gi|150400310|ref|YP_001324077.1| proteasome endopeptidase complex [Methanococcus vannielii SB]
gi|302595790|sp|A6USJ3.1|PSB_METVS RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|150013013|gb|ABR55465.1| Proteasome endopeptidase complex [Methanococcus vannielii SB]
Length = 219
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 63/121 (52%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V ++ ++ +A+D+R + + +++ KI D + + ++G D+Q+L + L
Sbjct: 14 GTTTVGLICEDGVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQSLIRLL 73
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
K+Y++R +M P + +L S +L+ R P Q +I G + P + ++D +G
Sbjct: 74 SAEAKIYKMRTGNNMTPLSCTTLTSNVLHGNRHYPLLTQLIIGGYDLINGPKLFSLDPVG 133
Query: 128 A 128
Sbjct: 134 G 134
>gi|391863506|gb|EIT72814.1| 20S proteasome, regulatory subunit beta type PSMB1/PRE7
[Aspergillus oryzae 3.042]
Length = 261
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 12/132 (9%)
Query: 7 NGSALVAMVGKNCFAIASDRR--LGVQLQT--------IATDFQRISKIHDRLFIGLSGL 56
NG + + + G + +A D R G + + I D H + + + G
Sbjct: 37 NGGSTLGITGADFAILAGDTRSVAGYNINSRYAPKVFKIGGDDDTGEGAH--IILSVVGF 94
Query: 57 ATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED 116
A D Q L +RL K+Y+ + + M A +S +LY+KRF PY+ ++AGL +E
Sbjct: 95 AADGQALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVHAILAGLDEEG 154
Query: 117 KPFICTMDSIGA 128
+ + + D +G+
Sbjct: 155 EGALYSYDPVGS 166
>gi|6319430|ref|NP_009512.1| proteasome core particle subunit beta 6 [Saccharomyces cerevisiae
S288c]
gi|130882|sp|P23724.1|PSB6_YEAST RecName: Full=Proteasome subunit beta type-6; AltName:
Full=Multicatalytic endopeptidase complex subunit C5;
AltName: Full=Proteasome component C5; Flags: Precursor
gi|11514003|pdb|1G0U|L Chain L, A Gated Channel Into The Proteasome Core Particle
gi|11514017|pdb|1G0U|Z Chain Z, A Gated Channel Into The Proteasome Core Particle
gi|178847471|pdb|2ZCY|L Chain L, Yeast 20s Proteasome:syringolin A-Complex
gi|178847485|pdb|2ZCY|Z Chain Z, Yeast 20s Proteasome:syringolin A-Complex
gi|178847513|pdb|3BDM|L Chain L, Yeast 20s Proteasome:glidobactin A-Complex
gi|178847527|pdb|3BDM|Z Chain Z, Yeast 20s Proteasome:glidobactin A-Complex
gi|323462947|pdb|3NZJ|L Chain L, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462961|pdb|3NZJ|Z Chain Z, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462975|pdb|3NZW|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323462989|pdb|3NZW|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323463003|pdb|3NZX|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|323463017|pdb|3NZX|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|333361183|pdb|3MG6|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361197|pdb|3MG6|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361211|pdb|3MG7|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361225|pdb|3MG7|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361239|pdb|3MG8|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|333361253|pdb|3MG8|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|403071959|pdb|4B4T|6 Chain 6, Near-Atomic Resolution Structural Model Of The Yeast 26s
Proteasome
gi|171468|gb|AAA68908.1| proteasome subunit [Saccharomyces cerevisiae]
gi|218467|dbj|BAA00725.1| proteasome subunit [Saccharomyces cerevisiae]
gi|463267|emb|CAA55053.1| YBL0407 [Saccharomyces cerevisiae]
gi|536057|emb|CAA84861.1| PRE7 [Saccharomyces cerevisiae]
gi|45270814|gb|AAS56788.1| YBL041W [Saccharomyces cerevisiae]
gi|151946352|gb|EDN64574.1| proteasome subunit [Saccharomyces cerevisiae YJM789]
gi|207347858|gb|EDZ73901.1| YBL041Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272740|gb|EEU07713.1| Pre7p [Saccharomyces cerevisiae JAY291]
gi|259144804|emb|CAY77743.1| Pre7p [Saccharomyces cerevisiae EC1118]
gi|285810292|tpg|DAA07077.1| TPA: proteasome core particle subunit beta 6 [Saccharomyces
cerevisiae S288c]
gi|323306044|gb|EGA59778.1| Pre7p [Saccharomyces cerevisiae FostersB]
gi|323338788|gb|EGA80003.1| Pre7p [Saccharomyces cerevisiae Vin13]
gi|323349870|gb|EGA84083.1| Pre7p [Saccharomyces cerevisiae Lalvin QA23]
gi|323356250|gb|EGA88054.1| Pre7p [Saccharomyces cerevisiae VL3]
gi|349576338|dbj|GAA21509.1| K7_Pre7p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365767035|gb|EHN08523.1| Pre7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392301173|gb|EIW12262.1| Pre7p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 241
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 61/124 (49%), Gaps = 3/124 (2%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQ 65
NG ++ + G++ +A D R + +I + ++ ++ D + + +G A D L +
Sbjct: 27 NGGTILGIAGEDFAVLAGDTR-NITDYSINSRYEPKVFDCGDNIVMSANGFAADGDALVK 85
Query: 66 RLVFRHKLYQL-REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
R K Y ++ + + A + LLY KRF PY+ +IAGL ++ K + + D
Sbjct: 86 RFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDEDGKGAVYSFD 145
Query: 125 SIGA 128
+G+
Sbjct: 146 PVGS 149
>gi|332158405|ref|YP_004423684.1| proteasome subunit beta [Pyrococcus sp. NA2]
gi|331033868|gb|AEC51680.1| proteasome, subunit beta [Pyrococcus sp. NA2]
Length = 216
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + K+ +A+D + + + ++I I DR+ I +G D Q + + L
Sbjct: 25 GTTTVGIRVKDGVILAADTQASLDHMVETLNIRKIIPITDRIAITTAGSVGDVQMIARIL 84
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+ YQ R M + A+L+S +L E R+ PY Q +I G +E P I +D +G
Sbjct: 85 EAEARYYQFTWGRPMSTKAMANLLSNILNENRWFPYLVQIIIGGYVEE--PTIANLDPLG 142
Query: 128 A 128
Sbjct: 143 G 143
>gi|29726328|pdb|1J2Q|H Chain H, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726329|pdb|1J2Q|I Chain I, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726330|pdb|1J2Q|J Chain J, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726331|pdb|1J2Q|K Chain K, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726332|pdb|1J2Q|L Chain L, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726333|pdb|1J2Q|M Chain M, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726334|pdb|1J2Q|N Chain N, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
Length = 202
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
Query: 12 VAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRH 71
V +V K+ +A+++R + + ++I +I DR+ + +G D+Q L + +
Sbjct: 4 VGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSVGDAQFLARIIKIEA 63
Query: 72 KLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGA 128
LY++R ER A+L S LL R+ PY Q +I G+ E K I ++D IG
Sbjct: 64 NLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGKS-IYSIDPIGG 119
>gi|407420511|gb|EKF38599.1| proteasome beta 6 subunit, putative,20S proteasome beta 6 subunit,
putative [Trypanosoma cruzi marinkellei]
Length = 246
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 8/127 (6%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIAT--DFQRISKIHDRLFIGLSGLATDSQTLY 64
NG + A+ GKN + D RL I T D ++ ++ + F+ +G+ D L
Sbjct: 39 NGGTIAAIAGKNYVILGGDTRLNGDF-CIHTRDDRTKLFQLTEHTFLASTGMQADRLQLQ 97
Query: 65 QRLVFRHKLYQLREERDMKPET--FASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC- 121
Q L +R + YQ + P T A L S +LY++RF PY+ ++ GL DE +C
Sbjct: 98 QMLKYRIQWYQYNNGGKL-PSTKAIAKLTSTMLYQRRFFPYYTFNMVVGL-DEKGAGVCY 155
Query: 122 TMDSIGA 128
+ D +G+
Sbjct: 156 SYDPVGS 162
>gi|295672922|ref|XP_002797007.1| proteasome component C5 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282379|gb|EEH37945.1| proteasome component C5 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 266
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 12/132 (9%)
Query: 7 NGSALVAMVGKNCFAIASDRR--LGVQLQT--------IATDFQRISKIHDRLFIGLSGL 56
NG + + + G++ +A D R G + T I D + H L + + G
Sbjct: 40 NGGSTLGIAGEDYAILAGDTRSVTGYSINTRYSPKLFKIGEDDEGGEGAH--LVLSVVGF 97
Query: 57 ATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED 116
A D + L +RL K+Y+ + + M + A +S +LY KRF PY+ ++ G+ ++
Sbjct: 98 AADGRALKERLDAVVKMYKYKHGKPMSVKACAQRLSTILYSKRFFPYYVHAILGGIDEDG 157
Query: 117 KPFICTMDSIGA 128
K + + D +G+
Sbjct: 158 KGALYSYDPVGS 169
>gi|341582772|ref|YP_004763264.1| proteasome subunit beta 2 [Thermococcus sp. 4557]
gi|340810430|gb|AEK73587.1| proteasome subunit beta 2 [Thermococcus sp. 4557]
Length = 200
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 2/112 (1%)
Query: 17 KNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQL 76
++ +A+D + + + ++I I DR+ I +G D Q L + L + YQ
Sbjct: 16 RDGVVLAADTQASLDHMVETLNIRKIVPITDRIAITTAGSVGDVQALARMLEAEARYYQF 75
Query: 77 REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGA 128
R M A+L+S +L E ++ PY Q +I G DE P + +D++G
Sbjct: 76 TWNRPMTTRAMANLLSNILNENKWFPYLVQIIIGGYVDE--PTLANLDAMGG 125
>gi|226471338|emb|CAX70750.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
japonicum]
Length = 178
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 18/151 (11%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLF-------IGLSGLATD 59
NG ++ + G + IASD RL DF +S+ RLF +G +G D
Sbjct: 8 NGGTVMGISGNDFALIASDTRL------CDGDFVILSRNCPRLFKLGCGNVLGCAGFHGD 61
Query: 60 SQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPF 119
TL + L + K Y+ +D+ + A L+S LY +RF P++ ++ GL D D+
Sbjct: 62 VLTLTKLLENKVKTYRYDHGKDISTKALAGLLSVSLYNRRFFPFYVSNILVGL-DGDRGV 120
Query: 120 ICTMDSIGA----KYVGSLQKILLLLELLES 146
+ + D +G+ Y S +L L+S
Sbjct: 121 LYSYDPVGSYEAEGYRASGSSAAILQPFLDS 151
>gi|396081771|gb|AFN83386.1| 20S proteasome subunit beta type-1 [Encephalitozoon romaleae
SJ-2008]
Length = 289
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 80/176 (45%), Gaps = 11/176 (6%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E N +V + + I D R + + + +I +I D LF+ +G DS +Y
Sbjct: 86 EDNSGTVVCLRQDDFIVIGGDTRHSSDMIINSREMTKIFQIGD-LFLTGTGFYADSHEVY 144
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
++ + + Y++ E + + A+L+S +LY KRF PY+ V++G + +P++ + D
Sbjct: 145 VKMAYEIRQYEV--EGSINVHSAANLLSKILYSKRFFPYYSYCVLSGFEN-GRPYVYSYD 201
Query: 125 SIGAKYVGSLQKILLLLELLESLFMVPVRQC--SSLIWNPMSCLKLYLKLCYHLLT 178
VGS + + + + P+ S WN +L + C L+T
Sbjct: 202 P-----VGSFESVTCICNGSGRSMIQPLLDSFVSKKNWNNAGQAQLSQEDCVRLIT 252
>gi|401626713|gb|EJS44638.1| pre7p [Saccharomyces arboricola H-6]
Length = 241
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQ 65
NG ++ + G++ +A D R + +I + ++ ++ D + + +G A D L +
Sbjct: 27 NGGTILGIAGEDFAVLAGDTR-NITDYSINSRYEPKVFDCGDNIVMSANGFAADGDALVK 85
Query: 66 RLVFRHKLYQL-REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
R K Y ++ + + A + LLY KRF PY+ +IAGL + K + + D
Sbjct: 86 RFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDENGKGAVYSFD 145
Query: 125 SIGA 128
+G+
Sbjct: 146 PVGS 149
>gi|448591212|ref|ZP_21650891.1| proteasome subunit beta [Haloferax elongans ATCC BAA-1513]
gi|445733768|gb|ELZ85333.1| proteasome subunit beta [Haloferax elongans ATCC BAA-1513]
Length = 243
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 62/122 (50%), Gaps = 5/122 (4%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + ++ +A+D R + + D Q++ +IH + ++G + +Q+L L
Sbjct: 49 GTTTVGIKTEDGVVLATDMRASMGYMVSSKDVQKVEEIHPTAALTIAGSVSAAQSLISNL 108
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYF-CQPVIAGLSDEDKPFICTMDSI 126
+LY+ R DM + ++LV L R G +F QP++ G+ DED I ++D
Sbjct: 109 KAEVRLYEARRGEDMSMQALSTLVGNFL---RSGAFFVVQPILGGV-DEDGGHIYSIDPA 164
Query: 127 GA 128
G+
Sbjct: 165 GS 166
>gi|448576104|ref|ZP_21642147.1| proteasome subunit beta [Haloferax larsenii JCM 13917]
gi|445729784|gb|ELZ81378.1| proteasome subunit beta [Haloferax larsenii JCM 13917]
Length = 243
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 62/122 (50%), Gaps = 5/122 (4%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + ++ +A+D R + + D Q++ +IH + ++G + +Q+L L
Sbjct: 49 GTTTVGIKTEDGVVLATDMRASMGYMVSSKDVQKVEEIHPTAALTIAGSVSAAQSLISNL 108
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYF-CQPVIAGLSDEDKPFICTMDSI 126
+LY+ R DM + ++LV L R G +F QP++ G+ DED I ++D
Sbjct: 109 KAEVRLYEARRGEDMSMQALSTLVGNFL---RSGAFFVVQPILGGV-DEDGGHIYSIDPA 164
Query: 127 GA 128
G+
Sbjct: 165 GS 166
>gi|448603032|ref|ZP_21656853.1| proteasome subunit beta [Haloferax sulfurifontis ATCC BAA-897]
gi|448624647|ref|ZP_21670595.1| proteasome subunit beta [Haloferax denitrificans ATCC 35960]
gi|445746228|gb|ELZ97690.1| proteasome subunit beta [Haloferax sulfurifontis ATCC BAA-897]
gi|445749852|gb|EMA01294.1| proteasome subunit beta [Haloferax denitrificans ATCC 35960]
Length = 243
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + ++ +A+D R + + D Q++ +IH + ++G + +Q+L L
Sbjct: 49 GTTTVGIKTEDGVVLATDMRASMGYMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLISSL 108
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+LY+ R DM + ++LV L F Y QP++ G+ DE P I ++D G
Sbjct: 109 RAEVRLYEARRGEDMSMQALSTLVGNFLRSGGF--YVVQPILGGV-DETGPHIYSIDPAG 165
Query: 128 A 128
+
Sbjct: 166 S 166
>gi|448585472|ref|ZP_21647865.1| proteasome subunit beta [Haloferax gibbonsii ATCC 33959]
gi|445726172|gb|ELZ77789.1| proteasome subunit beta [Haloferax gibbonsii ATCC 33959]
Length = 243
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + ++ +A+D R + + D Q++ +IH + ++G + +Q+L L
Sbjct: 49 GTTTVGIKTEDGVVLATDMRASMGYMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLISSL 108
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+LY+ R DM + ++LV L F Y QP++ G+ DE P I ++D G
Sbjct: 109 RAEVRLYEARRGEDMSMQALSTLVGNFLRSGGF--YVVQPILGGV-DETGPHIYSIDPAG 165
Query: 128 A 128
+
Sbjct: 166 S 166
>gi|407853394|gb|EKG06411.1| proteasome beta 6 subunit, putative,20S proteasome beta 6 subunit,
putative [Trypanosoma cruzi]
Length = 246
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 8/127 (6%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIAT--DFQRISKIHDRLFIGLSGLATDSQTLY 64
NG + A+ GKN + D RL I T D ++ ++ + F+ +G+ D L
Sbjct: 39 NGGTIAAIAGKNYVILGGDTRLNGDF-CIHTRDDRTKLFQLTEHTFLASTGMQADRLQLQ 97
Query: 65 QRLVFRHKLYQLREERDMKPET--FASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC- 121
Q L +R + YQ + P T A L S +LY++RF PY+ ++ GL DE +C
Sbjct: 98 QMLKYRIQWYQYNNGGKL-PSTKAIAKLTSTMLYQRRFFPYYTFNMVVGL-DEKGAGVCY 155
Query: 122 TMDSIGA 128
+ D +G+
Sbjct: 156 SYDPVGS 162
>gi|123447011|ref|XP_001312251.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
gi|121894091|gb|EAX99321.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
Length = 224
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 62/148 (41%), Gaps = 4/148 (2%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E +G + + G + I +D RL V + RI K++ I +G D
Sbjct: 17 EMHGGTAIGICGDDYVVIGADTRLSVDYSIDSRHKARIFKMNSNCMISATGFDGDIDAFI 76
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
R+ Y+ + +M E+ A VS LY KRF PY+ ++ G++ E K + D
Sbjct: 77 TRMRSILLNYENQHFHEMSVESVARCVSNTLYSKRFFPYYINILVGGINSEGKGKLYGYD 136
Query: 125 SIGA----KYVGSLQKILLLLELLESLF 148
+G Y + L LL+S F
Sbjct: 137 PVGTIEDLHYDSNGSGSSLAAPLLDSAF 164
>gi|190348096|gb|EDK40488.2| hypothetical protein PGUG_04586 [Meyerozyma guilliermondii ATCC
6260]
Length = 242
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQ 65
NG ++ + G++ +A D R V +I T ++ R+ + D + + +G D L
Sbjct: 28 NGGTVLGIAGEDFAVLAGDTRQVVGY-SINTRYEPRVFDVGDNIVMTANGFDADGAALID 86
Query: 66 RLVFRHKLYQLREE-RDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
R K Y+ + + + A + LLY KRF PY+ +IAGL DE + + + D
Sbjct: 87 RFRNSLKWYKFDHNGKRLSISSAARYIQHLLYGKRFFPYYVSTLIAGLDDEGRGAVYSYD 146
Query: 125 SIGA 128
+G+
Sbjct: 147 PVGS 150
>gi|226471340|emb|CAX70751.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
japonicum]
Length = 212
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 18/151 (11%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLF-------IGLSGLATD 59
NG ++ + G + IASD RL DF +S+ RLF +G +G D
Sbjct: 8 NGGTVMGISGNDFALIASDTRL------CDGDFVILSRNCPRLFKLGRGNVLGYAGFHGD 61
Query: 60 SQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPF 119
TL + L + K Y+ +D+ + A L+S LY +RF P++ ++ GL D D+
Sbjct: 62 VLTLTKLLENKVKTYRYDHGKDISTKALAGLLSVSLYNRRFFPFYVSNILVGL-DGDRGV 120
Query: 120 ICTMDSIGA----KYVGSLQKILLLLELLES 146
+ + D +G+ Y S +L L+S
Sbjct: 121 LYSYDPVGSYEAEGYRASGSSAAILQPFLDS 151
>gi|320586233|gb|EFW98912.1| proteasome component [Grosmannia clavigera kw1407]
Length = 265
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKI-------HD-RLFIGLSGLAT 58
NG +A+ G + +A D R + ++ KI HD R+ + + G A
Sbjct: 41 NGGTTLAIAGADFAIVAGDTRHTAGYSINSRFSPKVFKIGGSTADQHDARIVLSVVGFAA 100
Query: 59 DSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKP 118
D + L +RL K+Y+ R + + A +S +LY+KRF PY+ ++ GL ++
Sbjct: 101 DGEALKERLDTICKMYRYRHGKPISVNACAKRLSTILYQKRFFPYYTHAILGGLDEDGIG 160
Query: 119 FICTMDSIGA 128
I + D +G+
Sbjct: 161 AIYSYDPVGS 170
>gi|226489268|emb|CAX75778.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
japonicum]
Length = 212
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 14/129 (10%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLF-------IGLSGLATD 59
NG ++ + G + IASD RL DF +S+ RLF +G +G D
Sbjct: 8 NGGTVMGISGNDFALIASDTRL------CDGDFVILSRNCPRLFKLGRGNVLGCAGFHGD 61
Query: 60 SQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPF 119
TL + L + K Y+ +D+ + A L+S LY +RF P++ ++ GL D D+
Sbjct: 62 VLTLTKLLENKVKTYRYDHGKDISTKALAGLLSVSLYNRRFFPFYVSNILVGL-DGDRGV 120
Query: 120 ICTMDSIGA 128
+ + D +G+
Sbjct: 121 LYSYDPVGS 129
>gi|299116145|emb|CBN76052.1| proteasome beta subunit [Ectocarpus siliculosus]
Length = 249
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 62/122 (50%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
NG +VA+ G + IA+D RL ++ + R+ ++ + +G D+Q L +
Sbjct: 34 NGGTVVAVAGPDYCIIAADSRLSDGYTILSRNVTRVHRLSGDTHLATAGCWADTQGLLRL 93
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L + + Y++ + R M + + ++S LY +R P++ ++ GL +E + D++
Sbjct: 94 LEYLIRDYEMEQRRTMGTKAVSRMLSTHLYYRRGFPFYTFNIVGGLDEEGIGAVYGYDAV 153
Query: 127 GA 128
G+
Sbjct: 154 GS 155
>gi|289192182|ref|YP_003458123.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
sp. FS406-22]
gi|302595757|sp|D3S8M7.1|PSB_METSF RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|288938632|gb|ADC69387.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
sp. FS406-22]
Length = 224
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 56/104 (53%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V ++ + +A+D+R + + +++ KI D + + ++G D+Q + + L
Sbjct: 6 GTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLL 65
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAG 111
KLY++R R++ P A+L+S +L+ R P+ Q +I G
Sbjct: 66 TAEAKLYKMRTGRNIPPLACATLLSNILHSSRVFPFLTQIIIGG 109
>gi|145255859|ref|XP_001399123.1| proteasome component C5 [Aspergillus niger CBS 513.88]
gi|134084720|emb|CAK43377.1| unnamed protein product [Aspergillus niger]
gi|350630872|gb|EHA19244.1| hypothetical protein ASPNIDRAFT_54260 [Aspergillus niger ATCC 1015]
Length = 260
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHD--------RLFIGLSGLAT 58
NG + + + G + +A D R + ++ KI + + + G A
Sbjct: 36 NGGSTLGITGSDFAILAGDTRSVAGYNINSRYVPKVFKIGGDDESGEGANIVLSVVGFAA 95
Query: 59 DSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKP 118
D Q L +RL K+Y+ + + M A +S +LY+KRF PY+ ++AGL ++ K
Sbjct: 96 DGQALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVHAILAGLDEDGKG 155
Query: 119 FICTMDSIGA 128
+ + D +G+
Sbjct: 156 ALYSYDPVGS 165
>gi|156937409|ref|YP_001435205.1| proteasome endopeptidase complex protein [Ignicoccus hospitalis
KIN4/I]
gi|302595692|sp|A8AA46.1|PSB1_IGNH4 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|156566393|gb|ABU81798.1| Proteasome endopeptidase complex [Ignicoccus hospitalis KIN4/I]
Length = 198
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + K+ +A++RR+ ++ +++ K+ DR+ + +GL D Q + + L
Sbjct: 5 GATAVGIKVKDGVVLAAERRMSYGGFIMSKAARKVFKVGDRMGMACAGLYADMQAIARAL 64
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+ Y++ +R MK + A L+ +LY + P + V G DE P I +D +G
Sbjct: 65 ENEIRYYEISNKRKMKVRSAARLLGLILYSNKLFPLMTETVFGGYDDE--PRIFVLDPVG 122
Query: 128 A 128
+
Sbjct: 123 S 123
>gi|358373509|dbj|GAA90107.1| proteasome component Prs3 [Aspergillus kawachii IFO 4308]
Length = 260
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHD--------RLFIGLSGLAT 58
NG + + + G + +A D R + ++ KI + + + G A
Sbjct: 36 NGGSTLGITGSDFAILAGDTRSVAGYNINSRYVPKVFKIGGDDESGEGANIVLSVVGFAA 95
Query: 59 DSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKP 118
D Q L +RL K+Y+ + + M A +S +LY+KRF PY+ ++AGL ++ K
Sbjct: 96 DGQALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVHAILAGLDEDGKG 155
Query: 119 FICTMDSIGA 128
+ + D +G+
Sbjct: 156 ALYSYDPVGS 165
>gi|56758256|gb|AAW27268.1| SJCHGC09410 protein [Schistosoma japonicum]
gi|226489270|emb|CAX75779.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
japonicum]
gi|226489272|emb|CAX75780.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
japonicum]
gi|226489274|emb|CAX75781.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
japonicum]
Length = 212
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 18/151 (11%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLF-------IGLSGLATD 59
NG ++ + G + IASD RL DF +S+ RLF +G +G D
Sbjct: 8 NGGTVMGISGNDFALIASDTRL------CDGDFVILSRNCPRLFKLGRGNVLGCAGFHGD 61
Query: 60 SQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPF 119
TL + L + K Y+ +D+ + A L+S LY +RF P++ ++ GL D D+
Sbjct: 62 VLTLTKLLENKVKTYRYDHGKDISTKALAGLLSVSLYNRRFFPFYVSNILVGL-DGDRGV 120
Query: 120 ICTMDSIGA----KYVGSLQKILLLLELLES 146
+ + D +G+ Y S +L L+S
Sbjct: 121 LYSYDPVGSYEAEGYRASGSSAAILQPFLDS 151
>gi|307169438|gb|EFN62137.1| Proteasome subunit beta type-4 [Camponotus floridanus]
Length = 251
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 8/128 (6%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ---TLY 64
G++++ + K+ IA+D + +RI K++D +G SG D Q +
Sbjct: 44 GTSVIGIKFKDGVIIAADVLGSYGSLARYRNLERIMKVNDNTILGASGDYADFQCIKSYV 103
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKR--FGPYFCQPVIAGLSDEDKPFICT 122
+R + K L + +KP+ ++ ++Y +R F P++ VIAGL DE KPF+ T
Sbjct: 104 ERKILEEKC--LDDGFSLKPKALHCWLTRVMYNRRSNFDPFWNNFVIAGLEDE-KPFLAT 160
Query: 123 MDSIGAKY 130
+D +G Y
Sbjct: 161 VDKLGTAY 168
>gi|154331019|ref|XP_001561949.1| putative 20S proteasome beta 6 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134059271|emb|CAM36970.1| putative 20S proteasome beta 6 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 333
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 9/152 (5%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQ--LQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
NG A+ G + +A D RL L T D +I ++ ++ +G+ D L
Sbjct: 126 NGGTTAAIAGNDFVLLAGDTRLNGNFCLHT-RHDESKIFQLTPHTYMASNGMQADRLQLQ 184
Query: 65 QRLVFRHKLYQLREERDM-KPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTM 123
Q L +R K YQ + ++ A L+S +LY +RF PY+ +I GL +E +
Sbjct: 185 QLLKYRIKWYQYNNGGKVPSTKSIAQLLSTVLYHRRFFPYYTFNMIVGLDEEGHGVCYSY 244
Query: 124 DSIGAKYVGSLQKILLLLELLESLFMVPVRQC 155
D+ VGS + +L + F+ P+ C
Sbjct: 245 DA-----VGSTEPLLYGTRGSAASFVEPLLDC 271
>gi|448562307|ref|ZP_21635346.1| proteasome subunit beta [Haloferax prahovense DSM 18310]
gi|445719511|gb|ELZ71191.1| proteasome subunit beta [Haloferax prahovense DSM 18310]
Length = 243
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + + +A+D R + + D Q++ +IH + ++G + +Q+L L
Sbjct: 49 GTTTVGIKTEEGVVLATDMRASMGYMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLISSL 108
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+LY+ R DM + ++LV L F Y QP++ G+ DE P I ++D G
Sbjct: 109 RAEVRLYEARRGEDMSMQALSTLVGNFLRSGGF--YVVQPILGGV-DETGPHIYSIDPAG 165
Query: 128 A 128
+
Sbjct: 166 S 166
>gi|340507845|gb|EGR33723.1| proteasome subunit beta type 1, putative [Ichthyophthirius
multifiliis]
Length = 203
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 64/138 (46%), Gaps = 15/138 (10%)
Query: 6 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQ 65
+N + A+ GK +A D RL I+ + ++ K+ D +++ SG+ D L +
Sbjct: 40 FNAGTVCAIGGKGFVIVAGDTRLSQGYSIISRENSKLCKLSDNVYLATSGMYADFVALSK 99
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEK---------------RFGPYFCQPVIA 110
+L R ++YQ ++ + ++L+S LY K RF PY+ ++A
Sbjct: 100 QLQSRLQMYQYNNQKQASMKAISTLLSRTLYYKRYIYFIINFINKYIYRFFPYYTFNLLA 159
Query: 111 GLSDEDKPFICTMDSIGA 128
G ++ + D++G+
Sbjct: 160 GFDNQGNGQVIGYDAVGS 177
>gi|110668567|ref|YP_658378.1| proteasome beta subunit [Haloquadratum walsbyi DSM 16790]
gi|385804032|ref|YP_005840432.1| proteasome subunit beta [Haloquadratum walsbyi C23]
gi|121689658|sp|Q18GX3.1|PSB_HALWD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|109626314|emb|CAJ52772.1| proteasome beta subunit [Haloquadratum walsbyi DSM 16790]
gi|148508113|gb|ABQ75907.1| proteasome beta subunit [uncultured haloarchaeon]
gi|339729524|emb|CCC40787.1| proteasome beta subunit [Haloquadratum walsbyi C23]
Length = 243
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 63/122 (51%), Gaps = 5/122 (4%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + ++ +A+D R + + D Q++ +IH + ++G + +Q+L +
Sbjct: 49 GTTTVGLKTQDGTVLATDMRASLGRMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLISSI 108
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYF-CQPVIAGLSDEDKPFICTMDSI 126
+LY+ R DM E ++L+ L R G +F QP++ G+ D+D P I ++D
Sbjct: 109 RAEVRLYEARRGEDMSMEALSTLLGNFL---RSGGFFIVQPILGGV-DDDGPHIYSIDPA 164
Query: 127 GA 128
G+
Sbjct: 165 GS 166
>gi|242399181|ref|YP_002994605.1| Proteasome, beta subunit 2 [Thermococcus sibiricus MM 739]
gi|302595734|sp|C6A3R1.1|PSB2_THESM RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|242265574|gb|ACS90256.1| Proteasome, beta subunit 2 [Thermococcus sibiricus MM 739]
Length = 199
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 2/122 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQR 66
G+ V + K+ +A+D + + + ++I I DR+ I +G D Q L +
Sbjct: 5 TGTTTVGIKLKDGVVLAADTQASLDHMVETLNIKKILPITDRIAITTAGSVGDLQALARM 64
Query: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSI 126
L K YQ + M + A+L+S +L E ++ PY Q +I G +E P + ++D +
Sbjct: 65 LEAEAKYYQFTWGKPMTAKAMANLLSNILNESKWFPYMVQIIIGGYVEE--PTLASLDPL 122
Query: 127 GA 128
G
Sbjct: 123 GG 124
>gi|385805286|ref|YP_005841684.1| 20S proteasome, Alpha and Beta subunits [Fervidicoccus fontis
Kam940]
gi|383795149|gb|AFH42232.1| 20S proteasome, Alpha and Beta subunits [Fervidicoccus fontis
Kam940]
Length = 199
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 70/128 (54%), Gaps = 5/128 (3%)
Query: 3 ITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQT 62
+ + G+ +V + N IA + R+ + +++ +++ I++RL G +GL D+Q
Sbjct: 2 VETFQGATVVGLKFSNGAVIAGEERMTYRTFIMSSQAKKVYLINERLGAGTAGLMGDTQN 61
Query: 63 LYQRLVFRHKL--YQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
+ + +FR ++ Y+ + M ++ A L+S +LY R P + + ++AG+ D+ KP +
Sbjct: 62 IIR--IFREEIRYYETEIKSKMSTKSAAKLLSNILYSYRGFPLYGEFILAGI-DDKKPTL 118
Query: 121 CTMDSIGA 128
+D G+
Sbjct: 119 VVLDPAGS 126
>gi|393212888|gb|EJC98386.1| 20S proteasome subunit [Fomitiporia mediterranea MF3/22]
Length = 266
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 61/123 (49%), Gaps = 2/123 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQ 65
+G ++A+ G + IA D R I T + ++ ++ D+ + ++G A D +
Sbjct: 30 SGGTILAIAGADFSVIAGDTRQ-TDYYNIQTRYAPKVFRLTDKAVLAVNGFAADGNMFIK 88
Query: 66 RLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDS 125
++ R + Y+ +DM A L+ +LY +RF PY+ ++ G+ ++ + + D
Sbjct: 89 KVKQRLEWYRHAHAKDMPLRAVARLIQTMLYAQRFFPYYVYNILGGIEEDGSGAVYSFDP 148
Query: 126 IGA 128
+G+
Sbjct: 149 VGS 151
>gi|408404082|ref|YP_006862065.1| proteasome subunit beta [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408364678|gb|AFU58408.1| proteasome, subunit beta [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 219
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 59/121 (48%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ A+ K+ +A+D R L +I K+ L + ++G D+Q L +
Sbjct: 19 GTTTCALTCKDGVVLAADTRASAGLFIADRHVMKIQKVDQHLAMTIAGGVADAQNLVDTM 78
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+ LY+ + + M ++ A L S +L+ +R+ PY+ Q ++AG + + I +D G
Sbjct: 79 RYNANLYRFQNKELMPVKSAARLCSNILFNQRYFPYYVQIIMAGYTKNEGSQIHNIDLFG 138
Query: 128 A 128
+
Sbjct: 139 S 139
>gi|392866253|gb|EAS28865.2| proteasome component C5 [Coccidioides immitis RS]
Length = 260
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIH-------DRLFIGLSGLAT 58
NG + + + G + +A D R V I T F +I KI + + + G +
Sbjct: 37 NGGSTLGITGPDFAILAGDTR-SVSGYNINTRFAPKIFKIGADETGEGGHIILSVVGFSA 95
Query: 59 DSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKP 118
D Q L +RL K+Y+ + M + A +S +LY KRF PY+ ++ GL ++ K
Sbjct: 96 DGQALKERLDAIVKMYEYHHGKRMSVKACAQRLSTILYSKRFFPYYVHAILGGLDEDGKG 155
Query: 119 FICTMDSIGA 128
+ + D +G+
Sbjct: 156 ALYSYDPVGS 165
>gi|403171610|ref|XP_003330811.2| 20S proteasome subunit beta 6 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375169259|gb|EFP86392.2| 20S proteasome subunit beta 6 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 255
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
NG ++A+ K IA D R G +QT +++++ + I ++G A D + L
Sbjct: 29 NGGTILAISSKEFAVIAGDTRQSEGYSIQTRYAP--KVTQLTEECCIAVNGFAADGKELV 86
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
++L R + YQ ++ A LV +LY +RF PY+ ++AG+ + + + D
Sbjct: 87 KQLKQRLQWYQHTHASQPSVQSIARLVQTMLYGRRFFPYYAYVILAGIDRDGTGAVYSFD 146
Query: 125 SIGA 128
+G+
Sbjct: 147 PVGS 150
>gi|119185113|ref|XP_001243373.1| hypothetical protein CIMG_07269 [Coccidioides immitis RS]
Length = 259
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIH-------DRLFIGLSGLAT 58
NG + + + G + +A D R V I T F +I KI + + + G +
Sbjct: 36 NGGSTLGITGPDFAILAGDTR-SVSGYNINTRFAPKIFKIGADETGEGGHIILSVVGFSA 94
Query: 59 DSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKP 118
D Q L +RL K+Y+ + M + A +S +LY KRF PY+ ++ GL ++ K
Sbjct: 95 DGQALKERLDAIVKMYEYHHGKRMSVKACAQRLSTILYSKRFFPYYVHAILGGLDEDGKG 154
Query: 119 FICTMDSIGA 128
+ + D +G+
Sbjct: 155 ALYSYDPVGS 164
>gi|296805321|ref|XP_002843485.1| proteasome component C5 [Arthroderma otae CBS 113480]
gi|238844787|gb|EEQ34449.1| proteasome component C5 [Arthroderma otae CBS 113480]
Length = 261
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 12/132 (9%)
Query: 7 NGSALVAMVGKNCFAIASDRRL--GVQLQT--------IATDFQRISKIHDRLFIGLSGL 56
NG + + + G N +A D R G + T I D H + + + G
Sbjct: 37 NGGSTLGIAGDNFAILAGDTRSVSGYNINTRYAPKVFKIGADEHTGEGGH--MILCVVGF 94
Query: 57 ATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED 116
+ D + L +RL K+Y+ + M A +S +LY KRF PY+ ++AG+ +E
Sbjct: 95 SADGRALKERLDAIVKMYEYHHNKPMSVRACAQRLSTILYSKRFFPYYVHAILAGVDEEG 154
Query: 117 KPFICTMDSIGA 128
K + + D +G+
Sbjct: 155 KGALYSYDPVGS 166
>gi|292655712|ref|YP_003535609.1| proteasome subunit beta [Haloferax volcanii DS2]
gi|433422417|ref|ZP_20405977.1| proteasome subunit beta [Haloferax sp. BAB2207]
gi|448289696|ref|ZP_21480860.1| proteasome subunit beta [Haloferax volcanii DS2]
gi|448570967|ref|ZP_21639478.1| proteasome subunit beta [Haloferax lucentense DSM 14919]
gi|448595863|ref|ZP_21653310.1| proteasome subunit beta [Haloferax alexandrinus JCM 10717]
gi|306755975|sp|D4GYZ1.1|PSB_HALVD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|5833210|gb|AAD53406.1|AF126262_1 beta-1 subunit of 20S proteasome [Haloferax volcanii DS2]
gi|291370914|gb|ADE03141.1| proteasome beta subunit [Haloferax volcanii DS2]
gi|432198645|gb|ELK54905.1| proteasome subunit beta [Haloferax sp. BAB2207]
gi|445581429|gb|ELY35787.1| proteasome subunit beta [Haloferax volcanii DS2]
gi|445722885|gb|ELZ74536.1| proteasome subunit beta [Haloferax lucentense DSM 14919]
gi|445742317|gb|ELZ93812.1| proteasome subunit beta [Haloferax alexandrinus JCM 10717]
Length = 243
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + + +A+D R + + D Q++ +IH + ++G + +Q+L L
Sbjct: 49 GTTTVGIKTEEGVVLATDMRASMGYMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLISSL 108
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+LY+ R DM + ++LV L F Y QP++ G+ DE P I ++D G
Sbjct: 109 RAEVRLYEARRGEDMSMQALSTLVGNFLRSGGF--YVVQPILGGV-DETGPHIYSIDPAG 165
Query: 128 A 128
+
Sbjct: 166 S 166
>gi|118575464|ref|YP_875207.1| 20S proteasome, alpha and beta subunit [Cenarchaeum symbiosum A]
gi|302595701|sp|A0RU86.1|PSB1_CENSY RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|118193985|gb|ABK76903.1| 20S proteasome, alpha and beta subunit [Cenarchaeum symbiosum A]
Length = 193
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + +AS++R+ ++ + ++ +I + +GL D Q L ++
Sbjct: 3 GATAVGITYAGGVILASEKRIAYGNFLVSKNTRKTFQITPYVGAACAGLVADMQILSLQI 62
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
K+ ++ +RD+ P + A ++S ++YE+RF P Q ++ G+ E P I T+DS+G
Sbjct: 63 SALAKIRKMDLKRDIPPNSVAKMMSNMMYERRFFPLLTQVIVGGVVGE--PAIYTLDSLG 120
Query: 128 A 128
+
Sbjct: 121 S 121
>gi|146415774|ref|XP_001483857.1| hypothetical protein PGUG_04586 [Meyerozyma guilliermondii ATCC
6260]
Length = 242
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQ 65
NG ++ + G++ +A D R V +I T ++ R+ + D + + +G D L
Sbjct: 28 NGGTVLGIAGEDFAVLAGDTRQVVGY-SINTRYEPRVFDVGDNIVMTANGFDADGAALID 86
Query: 66 RLVFRHKLYQLREERDMKPETF---ASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICT 122
R FR+ L + + + K + A + LLY KRF PY+ +IAGL DE + + +
Sbjct: 87 R--FRNSLKWYKFDHNGKRLSILSAARYIQHLLYGKRFFPYYVSTLIAGLDDEGRGAVYS 144
Query: 123 MDSIGA 128
D +G+
Sbjct: 145 YDPVGS 150
>gi|337285369|ref|YP_004624843.1| proteasome subunit beta [Pyrococcus yayanosii CH1]
gi|334901303|gb|AEH25571.1| proteasome, subunit beta [Pyrococcus yayanosii CH1]
Length = 197
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 2/121 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + +A+D + + + ++I I DR+ I +G D Q L + L
Sbjct: 6 GTTTVGIRVDEGVVLAADTQASLDHMVETLNIRKIIPITDRIAITTAGSVGDVQMLARIL 65
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+ YQ R M A+L+S +L E ++ PY Q VI G +E P I +D +G
Sbjct: 66 EVEARYYQFTWGRPMSTRAMANLLSNILNENKWFPYLVQIVIGGYVEE--PVIANLDPLG 123
Query: 128 A 128
Sbjct: 124 G 124
>gi|303313738|ref|XP_003066878.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240106545|gb|EER24733.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|320032575|gb|EFW14527.1| proteasome component C5 [Coccidioides posadasii str. Silveira]
Length = 259
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIH-------DRLFIGLSGLAT 58
NG + + + G + +A D R V I T F +I KI + + + G +
Sbjct: 36 NGGSTLGITGPDFAILAGDTR-SVSGYNINTRFAPKIFKIGADETGEGGHIILSVVGFSA 94
Query: 59 DSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKP 118
D Q L +RL K+Y+ + M + A +S +LY KRF PY+ ++ GL ++ K
Sbjct: 95 DGQALKERLDAIVKMYEYHHGKRMSVKACAQRLSTILYSKRFFPYYVHAILGGLDEDGKG 154
Query: 119 FICTMDSIGA 128
+ + D +G+
Sbjct: 155 ALYSYDPVGS 164
>gi|449329565|gb|AGE95836.1| 20S proteasome alpha-type subunit [Encephalitozoon cuniculi]
Length = 290
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 66/124 (53%), Gaps = 4/124 (3%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E N + + + +A D R + + + +I ++ D L G +G D+ +Y
Sbjct: 87 EDNSGTTICLKQGDFIVVAGDTRHSSSMVINSREMSKIFQVGDFLLTG-TGFYADTHEVY 145
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
++V+ + Y++ + ++ + ASL+S +LY KRF PY+ V++G ++ KP++ + D
Sbjct: 146 VKMVYEIRQYEVDDSINI--HSAASLLSKILYSKRFFPYYSFCVLSGF-EKGKPYVYSYD 202
Query: 125 SIGA 128
IG+
Sbjct: 203 PIGS 206
>gi|327304499|ref|XP_003236941.1| hypothetical protein TERG_01664 [Trichophyton rubrum CBS 118892]
gi|326459939|gb|EGD85392.1| hypothetical protein TERG_01664 [Trichophyton rubrum CBS 118892]
Length = 261
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 12/132 (9%)
Query: 7 NGSALVAMVGKNCFAIASDRRL--GVQLQT--------IATDFQRISKIHDRLFIGLSGL 56
NG + + + G N +A D R G + T I D H + + + G
Sbjct: 37 NGGSTLGIAGDNFAILAGDTRSVSGYNINTRYAPKVFKIGADEHTGEGGH--IILCVVGF 94
Query: 57 ATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED 116
+ D + L +RL K+Y+ + M A +S +LY KRF PY+ ++AG+ +E
Sbjct: 95 SADGRALKERLDAIVKMYEYHHNKPMSVRACAQRLSTILYSKRFFPYYVHAILAGVDEEG 154
Query: 117 KPFICTMDSIGA 128
K + + D +G+
Sbjct: 155 KGALYSYDPVGS 166
>gi|154278896|ref|XP_001540261.1| proteasome component C5 [Ajellomyces capsulatus NAm1]
gi|150412204|gb|EDN07591.1| proteasome component C5 [Ajellomyces capsulatus NAm1]
Length = 266
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 65/131 (49%), Gaps = 10/131 (7%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHD--------RLFIGLSGLA 57
NG + + + GK+ +A D R V I T + ++ KI + L + + G A
Sbjct: 40 NGGSTLGIAGKDYAILAGDTR-SVSGYNINTRYAPKLFKIGEGDECGEGAHLVLSVVGFA 98
Query: 58 TDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDK 117
D + L +RL K+Y+ + + M A ++ +LY KRF PY+ ++AG+ ++ K
Sbjct: 99 ADGRALKERLDAIVKMYKYKHGKPMSVNACAQRLATILYSKRFFPYYVHAILAGMDEDGK 158
Query: 118 PFICTMDSIGA 128
+ + D +G+
Sbjct: 159 GALYSYDPVGS 169
>gi|326472775|gb|EGD96784.1| hypothetical protein TESG_04214 [Trichophyton tonsurans CBS 112818]
gi|326484951|gb|EGE08961.1| proteasome component C5 [Trichophyton equinum CBS 127.97]
Length = 261
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 12/132 (9%)
Query: 7 NGSALVAMVGKNCFAIASDRRL--GVQLQT--------IATDFQRISKIHDRLFIGLSGL 56
NG + + + G N +A D R G + T I D H + + + G
Sbjct: 37 NGGSTLGIAGDNFAILAGDTRSVSGYNINTRYAPKVFKIGADEHTGEGGH--IILCVVGF 94
Query: 57 ATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED 116
+ D + L +RL K+Y+ + M A +S +LY KRF PY+ ++AG+ +E
Sbjct: 95 SADGRALKERLDAIVKMYEYHHNKPMSVRACAQRLSTILYSKRFFPYYVHAILAGVDEEG 154
Query: 117 KPFICTMDSIGA 128
K + + D +G+
Sbjct: 155 KGALYSYDPVGS 166
>gi|256075409|ref|XP_002574012.1| proteasome subunit beta 1 (T01 family) [Schistosoma mansoni]
gi|353229361|emb|CCD75532.1| proteasome subunit beta 1 (T01 family) [Schistosoma mansoni]
Length = 212
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 14/129 (10%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLF-------IGLSGLATD 59
NG ++ + G + IASD RL DF +S+ RLF +G +G D
Sbjct: 8 NGGTVMGIAGNDFSLIASDTRL------CDGDFVILSRNSPRLFKLGPGNILGCAGFHGD 61
Query: 60 SQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPF 119
TL + L + K ++ +++ + A L+S LY +RF P++ V+ GL DE +
Sbjct: 62 VLTLTKLLENKVKTFRYDHGKNISTKALAGLLSVTLYNRRFFPFYVSNVLVGL-DEGRGV 120
Query: 120 ICTMDSIGA 128
+ + D +G+
Sbjct: 121 LYSYDPVGS 129
>gi|195439248|ref|XP_002067543.1| GK16137 [Drosophila willistoni]
gi|194163628|gb|EDW78529.1| GK16137 [Drosophila willistoni]
Length = 229
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 13/128 (10%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLF-------IGLSGLATD 59
NG ++VA+ G++ IA D R+ + D +S+ +LF IG G D
Sbjct: 29 NGGSIVAIAGEDFVTIAGDTRM------VNEDDAIVSRSQSKLFQLTPMTAIGSVGCFAD 82
Query: 60 SQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPF 119
+ + + +YQL + + + A ++S +Y RF PYF ++AG+ K
Sbjct: 83 TLAVVNVIKQNIHMYQLTHLKRISTDALAQMLSISMYSHRFFPYFVSNIVAGIDRNGKGA 142
Query: 120 ICTMDSIG 127
+ + D IG
Sbjct: 143 VFSYDPIG 150
>gi|448540830|ref|ZP_21623751.1| proteasome subunit beta [Haloferax sp. ATCC BAA-646]
gi|448549222|ref|ZP_21627911.1| proteasome subunit beta [Haloferax sp. ATCC BAA-645]
gi|448555580|ref|ZP_21631620.1| proteasome subunit beta [Haloferax sp. ATCC BAA-644]
gi|445708983|gb|ELZ60818.1| proteasome subunit beta [Haloferax sp. ATCC BAA-646]
gi|445713285|gb|ELZ65063.1| proteasome subunit beta [Haloferax sp. ATCC BAA-645]
gi|445718325|gb|ELZ70028.1| proteasome subunit beta [Haloferax sp. ATCC BAA-644]
Length = 243
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + + +A+D R + + D Q++ +IH + ++G + +Q+L L
Sbjct: 49 GTTTVGIKTEEGVVLATDMRASMGYMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLISSL 108
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+LY+ R DM + ++LV L F Y QP++ G+ DE P I ++D G
Sbjct: 109 RAEVRLYEARRGEDMSMQALSTLVGNFLRSGGF--YVVQPILGGV-DETGPHIYSIDPAG 165
Query: 128 A 128
+
Sbjct: 166 S 166
>gi|302501484|ref|XP_003012734.1| hypothetical protein ARB_00985 [Arthroderma benhamiae CBS 112371]
gi|302660909|ref|XP_003022128.1| hypothetical protein TRV_03731 [Trichophyton verrucosum HKI 0517]
gi|291176294|gb|EFE32094.1| hypothetical protein ARB_00985 [Arthroderma benhamiae CBS 112371]
gi|291186059|gb|EFE41510.1| hypothetical protein TRV_03731 [Trichophyton verrucosum HKI 0517]
Length = 261
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 12/132 (9%)
Query: 7 NGSALVAMVGKNCFAIASDRRL--GVQLQT--------IATDFQRISKIHDRLFIGLSGL 56
NG + + + G N +A D R G + T I D H + + + G
Sbjct: 37 NGGSTLGIAGDNFAILAGDTRSVSGYNINTRYAPKVFKIGADEHTGEGGH--IILCVVGF 94
Query: 57 ATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED 116
+ D + L +RL K+Y+ + M A +S +LY KRF PY+ ++AG+ +E
Sbjct: 95 SADGRALKERLDAIVKMYEYHHNKPMSVRACAQRLSTILYSKRFFPYYVHAILAGVDEEG 154
Query: 117 KPFICTMDSIGA 128
K + + D +G+
Sbjct: 155 KGALYSYDPVGS 166
>gi|239782090|pdb|3H4P|AA Chain a, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782091|pdb|3H4P|BB Chain b, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782092|pdb|3H4P|CC Chain c, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782093|pdb|3H4P|DD Chain d, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782094|pdb|3H4P|EE Chain e, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782095|pdb|3H4P|FF Chain f, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782096|pdb|3H4P|GG Chain g, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782104|pdb|3H4P|HH Chain h, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782105|pdb|3H4P|II Chain i, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782106|pdb|3H4P|JJ Chain j, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782107|pdb|3H4P|KK Chain k, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782108|pdb|3H4P|LL Chain l, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782109|pdb|3H4P|MM Chain m, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782110|pdb|3H4P|NN Chain n, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
Length = 219
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 55/100 (55%)
Query: 12 VAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRH 71
V ++ + +A+D+R + + +++ KI D + + ++G D+Q + + L+
Sbjct: 5 VGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLLIAEA 64
Query: 72 KLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAG 111
KLY++R R++ P A+L+S +L+ R P+ Q +I G
Sbjct: 65 KLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGG 104
>gi|156036420|ref|XP_001586321.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|154698304|gb|EDN98042.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 264
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 10/131 (7%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDR--------LFIGLSGLA 57
NG + +A+ G + +A D R I T +Q ++ KI L + + G A
Sbjct: 40 NGGSTLAISGSDFTIVAGDTR-STSGYNINTRYQPKVFKIGGTTASQDDATLVLSVVGFA 98
Query: 58 TDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDK 117
D + L +RL K+Y+ + + M + A ++ +LY KRF PY+ ++ GL +E K
Sbjct: 99 ADGEALKERLDAIVKMYRYQHGKPMSVKACAQRLATILYSKRFFPYYVTAILGGLDEEGK 158
Query: 118 PFICTMDSIGA 128
+ + D +G+
Sbjct: 159 GAVYSYDPVGS 169
>gi|389851755|ref|YP_006353989.1| proteasome subunit beta [Pyrococcus sp. ST04]
gi|388249061|gb|AFK21914.1| proteasome, subunit beta [Pyrococcus sp. ST04]
Length = 197
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + K+ +A+D + + + ++I I DR+ I +G D Q L + L
Sbjct: 6 GTTTVGIKVKDGVVLAADTQASLDHMVETLNIRKIIPITDRIAITTAGSVGDVQVLARIL 65
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+ Y R M + A+L+S +L E ++ PY Q +I G DE P I +D G
Sbjct: 66 EAEARYYYFTWGRPMSTKAMANLLSNILNEHKWFPYLVQIIIGGYVDE--PTIANLDPFG 123
Query: 128 A 128
Sbjct: 124 G 124
>gi|154308528|ref|XP_001553600.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
gi|347826621|emb|CCD42318.1| similar to proteasome subunit beta type-1-A [Botryotinia
fuckeliana]
Length = 264
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 10/131 (7%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDR--------LFIGLSGLA 57
NG + +A+ G + +A D R I T +Q ++ KI L + + G A
Sbjct: 40 NGGSTLAISGSDFTIVAGDTR-STSGYNINTRYQPKVFKIGGTTAAQDDATLVLSVVGFA 98
Query: 58 TDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDK 117
D + L +RL K+Y+ + + M + A ++ +LY KRF PY+ ++ GL +E K
Sbjct: 99 ADGEALKERLDAIVKMYRYQHGKPMSVKACAQRLATILYSKRFFPYYVTAILGGLDEEGK 158
Query: 118 PFICTMDSIGA 128
+ + D +G+
Sbjct: 159 GAVYSYDPVGS 169
>gi|398395515|ref|XP_003851216.1| proteasome core particle subunit beta 6 [Zymoseptoria tritici
IPO323]
gi|339471095|gb|EGP86192.1| hypothetical protein MYCGRDRAFT_105119 [Zymoseptoria tritici
IPO323]
Length = 264
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 7 NGSALVAMVGKNCFAIASDRRL--GVQLQT------IATDFQRISKIHDRLFIGLSGLAT 58
NG + + + G + +A D R G + T + + R+ + + G A
Sbjct: 40 NGGSTLGISGSDFTILAGDTRSTSGYNINTRYAPKLFKIGGEGPDQTGARIVLSVVGFAA 99
Query: 59 DSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKP 118
D L +RL K+Y+ + +DM A +S +LY KRF P++ ++ G+ DE K
Sbjct: 100 DGHALKERLDTVVKMYKYQHGKDMPVHACAQRLSHILYGKRFFPFYVTAILGGIDDEGKG 159
Query: 119 FICTMDSIGA 128
+ + D +G+
Sbjct: 160 ALYSYDPVGS 169
>gi|148643097|ref|YP_001273610.1| proteasome, beta subunit [Methanobrevibacter smithii ATCC 35061]
gi|302595842|sp|A5UM14.1|PSB_METS3 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|148552114|gb|ABQ87242.1| proteasome, beta subunit [Methanobrevibacter smithii ATCC 35061]
Length = 204
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 4/121 (3%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + K+ AS+RR + ++I KI+D + ++G D+Q L + +
Sbjct: 8 GTTTVGITCKDGVVFASERRASMGNLVAHKVAEKIFKINDHIVTTIAGSVGDAQNLMKII 67
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
LYQ+R + + AS+ + +L R GP + Q ++ G+ D DKP + ++D G
Sbjct: 68 EAEVSLYQMRNNDKISVKAAASVTANIL---RSGPMYVQTLLGGM-DGDKPSLYSLDPAG 123
Query: 128 A 128
Sbjct: 124 G 124
>gi|448414651|ref|ZP_21577664.1| proteasome subunit beta [Halosarcina pallida JCM 14848]
gi|445681760|gb|ELZ34188.1| proteasome subunit beta [Halosarcina pallida JCM 14848]
Length = 243
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + ++ +A+D R + + D Q++ +IH + ++G + +Q+L + +
Sbjct: 49 GTTTVGLKTEDGVVLATDMRASLGYMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLIRSI 108
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+LY+ R +M ++L+ L F Y QP++ G+ DED P I ++D G
Sbjct: 109 RAEVRLYESRRGENMSMTALSTLLGNFLRSGAF--YVVQPILGGV-DEDGPHIYSIDPAG 165
Query: 128 A 128
+
Sbjct: 166 S 166
>gi|396457904|ref|XP_003833565.1| similar to proteasome subunit beta type-1-A [Leptosphaeria maculans
JN3]
gi|312210113|emb|CBX90200.1| similar to proteasome subunit beta type-1-A [Leptosphaeria maculans
JN3]
Length = 264
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 7 NGSALVAMVGKNCFAIASDRRL--GVQLQT-IATDFQRI----SKIHD-RLFIGLSGLAT 58
NG + + + G++ +A D R G + T A +I S D R+ + + G A
Sbjct: 40 NGGSTLGIAGQDFAILAGDTRSTSGYNINTRYAPKLFKIGGEGSDNKDARIVLSVVGFAA 99
Query: 59 DSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKP 118
D L +RL K+Y+ + + M A +S +LY KRF PY+ ++AGL +E K
Sbjct: 100 DGDALKERLDTIVKMYKYQHGKPMSVSACAQRLSHILYNKRFFPYYVHAILAGLDEEGKG 159
Query: 119 FICTMDSIGA 128
+ + D +G+
Sbjct: 160 ALYSYDPVGS 169
>gi|57642142|ref|YP_184620.1| proteasome subunit beta 2 [Thermococcus kodakarensis KOD1]
gi|74505318|sp|Q5JHL8.1|PSB2_PYRKO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|57160466|dbj|BAD86396.1| proteasome, beta subunit 2 [Thermococcus kodakarensis KOD1]
Length = 199
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + K +A+D + + + ++I I DR+ I +G D Q L + L
Sbjct: 6 GTTTVGIRTKEGVVLAADTQASLDHMVETLNIRKILPITDRIAITTAGSVGDVQALARML 65
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+ YQ R M + A L+S +L E ++ PY Q +I G +E P + +D +G
Sbjct: 66 EAEARYYQFTWGRPMTAKAMAHLLSNILNENKWFPYMVQIIIGGYVEE--PTLANLDPLG 123
Query: 128 A 128
Sbjct: 124 G 124
>gi|61612096|gb|AAX47290.1| proteasome beta 1 subunit [Clonorchis sinensis]
Length = 217
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTI--ATDFQRISKIHDRLFIGLSGLATDSQTLY 64
NG ++ + G + +ASD RL + + + + + K+ + + +G D TL
Sbjct: 11 NGGTVMGISGDDFALLASDTRLCAEDRYFIYSRNSPHLYKMGNGKVLATTGFHGDVLTLT 70
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ L R K Y+ +++ FA+L+S LY +RF P++ ++ GL +E + + D
Sbjct: 71 KLLENRVKTYRYDHGKEISTNAFAALLSVTLYTRRFFPFYVSSILGGLDEEGRGAVYRYD 130
Query: 125 SIGA 128
+G+
Sbjct: 131 PVGS 134
>gi|124512686|ref|XP_001349476.1| proteasome beta-subunit [Plasmodium falciparum 3D7]
gi|6650323|gb|AAF21797.1| proteasome beta-subunit [Plasmodium falciparum]
gi|23499245|emb|CAD51325.1| proteasome beta-subunit [Plasmodium falciparum 3D7]
Length = 265
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 63/114 (55%), Gaps = 7/114 (6%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G++++A+ K+ IA+DR+ + +RI KI+++ +G SG D+Q L++ L
Sbjct: 9 GTSVIAIKYKHGIMIAADRKASYGSYAKFQNVERIFKINNKTVMGFSGELADAQYLHE-L 67
Query: 68 VFRHKLYQLREER---DM-KPETFASLVSALLY--EKRFGPYFCQPVIAGLSDE 115
+ R + L E++ DM P+ + S VS + Y + R P F +IAG++ +
Sbjct: 68 LTRKNINNLSEKKRKEDMYTPQHYHSYVSRVFYVRKNRIDPLFNNIIIAGINSQ 121
>gi|344305208|gb|EGW35440.1| proteasome component C5 [Spathaspora passalidarum NRRL Y-27907]
Length = 242
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 64/124 (51%), Gaps = 3/124 (2%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQ 65
NG ++ + G++ +A D R V+ +I + ++ +I + D + + +G A D L
Sbjct: 28 NGGTVLGIAGEDFAVLAGDTRQ-VEGYSIQSRYEPKIFDVGDNIVMTANGFAADGVALID 86
Query: 66 RLVFRHKLYQLRE-ERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
+ + K Y+ ++ ++ A + LLY KRF PY+ +IAGL +E K + + D
Sbjct: 87 KFRQQLKWYKFDNFGGKLEIKSAARYIQHLLYGKRFFPYYVSTLIAGLDEEGKGAVYSYD 146
Query: 125 SIGA 128
+G+
Sbjct: 147 PVGS 150
>gi|240273184|gb|EER36706.1| proteasome component [Ajellomyces capsulatus H143]
gi|325089210|gb|EGC42520.1| proteasome component [Ajellomyces capsulatus H88]
Length = 266
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 65/131 (49%), Gaps = 10/131 (7%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHD--------RLFIGLSGLA 57
NG + + + GK+ +A D R V I T + ++ KI + L + + G A
Sbjct: 40 NGGSTLGIAGKDYAILAGDTR-SVSGYNINTRYAPKLFKIGEGDEGGEGAHLVLSVVGFA 98
Query: 58 TDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDK 117
D + L +RL K+Y+ + + M A ++ +LY KRF PY+ ++AG+ ++ K
Sbjct: 99 ADGRALKERLDAIVKMYKYKHGKPMSVNACAQRLATILYSKRFFPYYVHAILAGMDEDGK 158
Query: 118 PFICTMDSIGA 128
+ + D +G+
Sbjct: 159 GALYSYDPVGS 169
>gi|225554384|gb|EEH02683.1| proteasome component C5 [Ajellomyces capsulatus G186AR]
Length = 266
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 65/131 (49%), Gaps = 10/131 (7%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHD--------RLFIGLSGLA 57
NG + + + GK+ +A D R V I T + ++ KI + L + + G A
Sbjct: 40 NGGSTLGIAGKDYAILAGDTR-SVSGYNINTRYAPKLFKIGEGDEGGEGAHLVLSVVGFA 98
Query: 58 TDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDK 117
D + L +RL K+Y+ + + M A ++ +LY KRF PY+ ++AG+ ++ K
Sbjct: 99 ADGRALKERLDAIVKMYKYKHGKPMSVNACAQRLATILYSKRFFPYYVHAILAGMDEDGK 158
Query: 118 PFICTMDSIGA 128
+ + D +G+
Sbjct: 159 GALYSYDPVGS 169
>gi|452837570|gb|EME39512.1| hypothetical protein DOTSEDRAFT_180093 [Dothistroma septosporum
NZE10]
Length = 263
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 62/132 (46%), Gaps = 12/132 (9%)
Query: 7 NGSALVAMVGKNCFAIASDRRL--GVQLQT--------IATDFQRISKIHDRLFIGLSGL 56
NG + + + G + +A D R G + T I D + ++ + + G
Sbjct: 39 NGGSTLGISGTDFTVLAGDTRSTSGYNINTRYEPKLFKIGGDGPE--NVGSKIVLSVVGF 96
Query: 57 ATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED 116
A D + L +RL K+Y+ + +D+ A +S +LY KRF PY+ ++ G+ +E
Sbjct: 97 AADGKALKERLDTVVKMYKYQHGKDISVHACAQRLSHILYSKRFFPYYVTAILGGIDEEG 156
Query: 117 KPFICTMDSIGA 128
K + + D +G+
Sbjct: 157 KGALYSYDPVGS 168
>gi|390961463|ref|YP_006425297.1| proteasome subunit beta 2 [Thermococcus sp. CL1]
gi|390519771|gb|AFL95503.1| proteasome subunit beta 2 [Thermococcus sp. CL1]
Length = 200
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 2/112 (1%)
Query: 17 KNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQL 76
++ +A+D + + + ++I I DR+ I +G D Q L + L + YQ
Sbjct: 16 RDGVVLAADTQASLDHMVETLNIRKIVPITDRIAITTAGSVGDVQALARMLEAEARYYQF 75
Query: 77 REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGA 128
R M + A+L+S +L E ++ PY Q +I G +E P + +D +G
Sbjct: 76 TWNRPMSTKAMANLLSNILNENKWFPYLVQIIIGGYVEE--PTLANLDPMGG 125
>gi|327304495|ref|XP_003236939.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
gi|326459937|gb|EGD85390.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
Length = 261
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 4/127 (3%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G++++A+ K+ IASD TD +R+ + +G G +D Q + + L
Sbjct: 40 GTSVIAVKFKDGVVIASDNLGSYGSLARFTDLKRLRAFDNSSVVGFGGDVSDMQYIDRVL 99
Query: 68 --VFRHKLYQLREERDMKPETFASLVSALLYEKR--FGPYFCQPVIAGLSDEDKPFICTM 123
+ + Y E + + + +S LLY++R F P + ++AGL DE KPF+ +
Sbjct: 100 NSLDIQENYSTYGEHSLNAKNLHTYLSKLLYQRRSKFDPLWNHILVAGLDDEGKPFLSSA 159
Query: 124 DSIGAKY 130
D +G Y
Sbjct: 160 DLLGTTY 166
>gi|440293947|gb|ELP86994.1| proteasome subunit beta type 1, putative, partial [Entamoeba
invadens IP1]
Length = 173
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%)
Query: 41 RISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRF 100
+I ++ + SG+ D L +L + K Y+ ++M E A L+S LY RF
Sbjct: 8 KIYQLSSKCIFTASGMRADMNELTDQLKAQIKNYRYENNKEMSTEAIAQLLSNTLYSHRF 67
Query: 101 GPYFCQPVIAGLSDEDKPFICTMDSIGA 128
PY+ ++ GLS + +P I D++G+
Sbjct: 68 FPYYSFSILTGLSVKGEPLIYNYDAVGS 95
>gi|326472773|gb|EGD96782.1| proteasome subunit beta [Trichophyton tonsurans CBS 112818]
gi|326484953|gb|EGE08963.1| proteasome component Pre4 [Trichophyton equinum CBS 127.97]
Length = 261
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 4/127 (3%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G++++A+ K+ IASD TD +R+ + +G G +D Q + + L
Sbjct: 40 GTSVIAVKFKDGVVIASDNLGSYGSLARFTDLKRLRAFDNSSVVGFGGDVSDMQYIDRVL 99
Query: 68 --VFRHKLYQLREERDMKPETFASLVSALLYEKR--FGPYFCQPVIAGLSDEDKPFICTM 123
+ + Y E + + + +S LLY++R F P + ++AGL DE KPF+ +
Sbjct: 100 NSLDIQENYSTYGEHSLNAKNLHTYLSKLLYQRRSKFDPLWNHILVAGLDDEGKPFLSSA 159
Query: 124 DSIGAKY 130
D +G Y
Sbjct: 160 DLLGTTY 166
>gi|150400488|ref|YP_001324254.1| proteasome endopeptidase complex protein [Methanococcus aeolicus
Nankai-3]
gi|302595768|sp|A6UT20.1|PSB_META3 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|150013191|gb|ABR55642.1| Proteasome endopeptidase complex [Methanococcus aeolicus Nankai-3]
Length = 217
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 62/121 (51%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V +V + +A+D+R + + +++ KI D + + ++G D+Q+L + +
Sbjct: 14 GTTTVGIVCNDGIVLATDKRATMGNLIADKEAKKLYKIDDYMAMTIAGSVGDAQSLVRII 73
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
LY+LR ++ P + A L+S +L+ R P+ Q +I G + ++D++G
Sbjct: 74 SAEANLYKLRTGNNIPPHSCAMLLSNVLHGSRHFPFLIQLIIGGYDTIHGAKLFSLDAVG 133
Query: 128 A 128
Sbjct: 134 G 134
>gi|409095355|ref|ZP_11215379.1| proteasome subunit beta [Thermococcus zilligii AN1]
Length = 206
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 74/151 (49%), Gaps = 6/151 (3%)
Query: 2 SITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQ 61
++ G+ V ++ ++ +A+D+R + + + +I +I D L I +GL D
Sbjct: 4 GLSAAKGTTTVGLICRDGVILAADKRATMGNMITSKEVTKIFQIDDHLAIAGAGLVGDIL 63
Query: 62 TLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
++ + L +LY+ R R+M + +L++ +L+ R YF ++ G E P +
Sbjct: 64 SMVRLLRAEARLYRARVGREMSVKVLTTLIANILHGGRGYGYFAWFLVGGYDTE--PRLY 121
Query: 122 TMDSIGA----KYVGSLQKILLLLELLESLF 148
++D+ G KYV + + L +LE+ F
Sbjct: 122 SIDAAGGVTEEKYVAAGSGMEFALAILENEF 152
>gi|395645475|ref|ZP_10433335.1| proteasome endopeptidase complex, beta subunit [Methanofollis
liminatans DSM 4140]
gi|395442215|gb|EJG06972.1| proteasome endopeptidase complex, beta subunit [Methanofollis
liminatans DSM 4140]
Length = 212
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 65/121 (53%), Gaps = 1/121 (0%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V +V +A+++R + + +++ +I DR+ + +G D+Q+L + +
Sbjct: 11 GTTTVGLVFDEGIVLATEKRATMGTLIASKTAKKVYQIADRIGMTTAGGVGDAQSLARLM 70
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
LY++R + + A+L+S L + R+ PY+ Q ++ G+ D + P + ++D++G
Sbjct: 71 QVECSLYKVRHGKPISVGAAATLLSNYLQQNRYYPYYVQLLVGGV-DRNGPSVYSVDAMG 129
Query: 128 A 128
Sbjct: 130 G 130
>gi|19074564|ref|NP_586070.1| 20S PROTEASOME ALPHA-TYPE SUBUNIT [Encephalitozoon cuniculi GB-M1]
gi|74630117|sp|Q8SRH6.1|PSB6_ENCCU RecName: Full=Probable proteasome subunit beta type-6; AltName:
Full=26S proteasome beta-type subunit PRE7; AltName:
Full=Multicatalytic endopeptidase complex subunit PRE7
gi|19069206|emb|CAD25674.1| 20S PROTEASOME ALPHA-TYPE SUBUNIT [Encephalitozoon cuniculi GB-M1]
Length = 290
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 66/124 (53%), Gaps = 4/124 (3%)
Query: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
E N + + + +A D R + + + +I ++ D L G +G D+ +Y
Sbjct: 87 EDNSGTTICLKQGDFIVVAGDTRHSSSMVINSREMSKIFQVGDFLLTG-TGFYADTHEVY 145
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMD 124
++V+ + Y++ + ++ + A+L+S +LY KRF PY+ V++G ++ KP++ + D
Sbjct: 146 VKMVYEIRQYEVDDSINI--HSAANLLSKILYSKRFFPYYSFCVLSGF-EKGKPYVYSYD 202
Query: 125 SIGA 128
IG+
Sbjct: 203 PIGS 206
>gi|73535606|pdb|1YA7|H Chain H, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535607|pdb|1YA7|I Chain I, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535608|pdb|1YA7|J Chain J, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535609|pdb|1YA7|K Chain K, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535610|pdb|1YA7|L Chain L, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535611|pdb|1YA7|M Chain M, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535612|pdb|1YA7|N Chain N, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535645|pdb|1YAR|H Chain H, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535646|pdb|1YAR|I Chain I, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535647|pdb|1YAR|J Chain J, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535648|pdb|1YAR|K Chain K, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535649|pdb|1YAR|L Chain L, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535650|pdb|1YAR|M Chain M, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535651|pdb|1YAR|N Chain N, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535666|pdb|1YAU|H Chain H, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535667|pdb|1YAU|I Chain I, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535668|pdb|1YAU|J Chain J, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535669|pdb|1YAU|K Chain K, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535670|pdb|1YAU|L Chain L, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535671|pdb|1YAU|M Chain M, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535672|pdb|1YAU|N Chain N, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|282403716|pdb|3IPM|H Chain H, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403717|pdb|3IPM|I Chain I, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403718|pdb|3IPM|J Chain J, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403719|pdb|3IPM|K Chain K, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403720|pdb|3IPM|L Chain L, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403721|pdb|3IPM|M Chain M, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403722|pdb|3IPM|N Chain N, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
Length = 217
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 75/137 (54%), Gaps = 6/137 (4%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
M+ T G+ V + K+ +A++RR+ ++ + + +++ +I + ++GL D+
Sbjct: 1 MNQTLETGTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
Q L + + +LY+L+ +M E A+L+S +L + ++ PY Q ++ G+ + P +
Sbjct: 61 QVLVRYMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGI--DTAPHV 118
Query: 121 CTMDSIGAKYVGSLQKI 137
++D+ G GS++ I
Sbjct: 119 FSIDAAG----GSVEDI 131
>gi|315230761|ref|YP_004071197.1| proteasome subunit beta [Thermococcus barophilus MP]
gi|315183789|gb|ADT83974.1| proteasome subunit beta [Thermococcus barophilus MP]
Length = 199
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + K +A+D + + + ++I I DR+ I +G D Q L + L
Sbjct: 6 GTTTVGIKVKEGVVLAADTQASLDHMVETLNIKKILPITDRIAITTAGSVGDVQMLARML 65
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+ YQ + M + A+L+S +L E ++ PY Q +I G +E P + +D +G
Sbjct: 66 EAEARYYQFTWGKPMTAKAMANLLSNILNENKWFPYLVQIIIGGYVEE--PTLANLDPLG 123
Query: 128 A 128
Sbjct: 124 G 124
>gi|16081708|ref|NP_394085.1| proteasome, beta chain [Thermoplasma acidophilum DSM 1728]
gi|130867|sp|P28061.1|PSB_THEAC RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|1633360|pdb|1PMA|B Chain B, Proteasome From Thermoplasma Acidophilum
gi|1633374|pdb|1PMA|P Chain P, Proteasome From Thermoplasma Acidophilum
gi|1633375|pdb|1PMA|Q Chain Q, Proteasome From Thermoplasma Acidophilum
gi|1633376|pdb|1PMA|R Chain R, Proteasome From Thermoplasma Acidophilum
gi|1633377|pdb|1PMA|S Chain S, Proteasome From Thermoplasma Acidophilum
gi|1633378|pdb|1PMA|T Chain T, Proteasome From Thermoplasma Acidophilum
gi|1633379|pdb|1PMA|U Chain U, Proteasome From Thermoplasma Acidophilum
gi|1633380|pdb|1PMA|V Chain V, Proteasome From Thermoplasma Acidophilum
gi|1633381|pdb|1PMA|W Chain W, Proteasome From Thermoplasma Acidophilum
gi|1633382|pdb|1PMA|X Chain X, Proteasome From Thermoplasma Acidophilum
gi|1633383|pdb|1PMA|Y Chain Y, Proteasome From Thermoplasma Acidophilum
gi|1633384|pdb|1PMA|Z Chain Z, Proteasome From Thermoplasma Acidophilum
gi|1633385|pdb|1PMA|1 Chain 1, Proteasome From Thermoplasma Acidophilum
gi|1633386|pdb|1PMA|2 Chain 2, Proteasome From Thermoplasma Acidophilum
gi|154680|gb|AAA72102.1| proteasome beta-subunit [Thermoplasma acidophilum]
gi|10639779|emb|CAC11751.1| proteasome, beta chain [Thermoplasma acidophilum]
Length = 211
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 75/137 (54%), Gaps = 6/137 (4%)
Query: 1 MSITEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDS 60
M+ T G+ V + K+ +A++RR+ ++ + + +++ +I + ++GL D+
Sbjct: 1 MNQTLETGTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDA 60
Query: 61 QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
Q L + + +LY+L+ +M E A+L+S +L + ++ PY Q ++ G+ + P +
Sbjct: 61 QVLVRYMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGI--DTAPHV 118
Query: 121 CTMDSIGAKYVGSLQKI 137
++D+ G GS++ I
Sbjct: 119 FSIDAAG----GSVEDI 131
>gi|115400894|ref|XP_001216035.1| proteasome component C5 [Aspergillus terreus NIH2624]
gi|114189976|gb|EAU31676.1| proteasome component C5 [Aspergillus terreus NIH2624]
Length = 261
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 64/131 (48%), Gaps = 10/131 (7%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHD--------RLFIGLSGLA 57
NG + + + G + +A D R V I T + ++ KI ++ + + G A
Sbjct: 37 NGGSTLGITGADFAILAGDTR-SVAGYNINTRYDPKVFKIGGDDETGEGAQILLSVVGFA 95
Query: 58 TDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDK 117
D L +RL K+Y+ + + M A +S +LY+KRF PY+ ++AGL ++ K
Sbjct: 96 ADGHALKERLDAVVKMYKYQHGKPMSVTACAQRLSTILYQKRFFPYYVHAILAGLDEDGK 155
Query: 118 PFICTMDSIGA 128
+ + D +G+
Sbjct: 156 GALYSYDPVGS 166
>gi|296242989|ref|YP_003650476.1| proteasome endopeptidase complex subunit beta [Thermosphaera
aggregans DSM 11486]
gi|296095573|gb|ADG91524.1| proteasome endopeptidase complex, beta component [Thermosphaera
aggregans DSM 11486]
Length = 202
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Query: 17 KNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQL 76
+ +AS++RL +++ +++ I + +G +GL D L + L K Y+L
Sbjct: 14 REGVVLASEKRLTYDGFVLSSSVKKVYAITPHVGVGFAGLMGDVNILKRMLEMEAKYYEL 73
Query: 77 REERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGA 128
+ R+++ A ++S +LY + P + V+ G D++ P + +D +G+
Sbjct: 74 QHGREIRVRGLAKMLSVILYSYKLAPMLTEIVVGGY-DDNGPQLYILDPVGS 124
>gi|315045602|ref|XP_003172176.1| proteasome component C5 [Arthroderma gypseum CBS 118893]
gi|311342562|gb|EFR01765.1| proteasome component C5 [Arthroderma gypseum CBS 118893]
Length = 261
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 12/132 (9%)
Query: 7 NGSALVAMVGKNCFAIASDRRL--GVQLQT--------IATDFQRISKIHDRLFIGLSGL 56
NG + + + G N +A D R G + + I D H + + + G
Sbjct: 37 NGGSTLGIAGDNFAILAGDTRSVSGYNINSRYAPKVFKIGADEHTGEGGH--IILCVVGF 94
Query: 57 ATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDED 116
+ D + L +RL K+Y+ + M A +S +LY KRF PY+ ++AG+ +E
Sbjct: 95 SADGRALKERLDAIVKMYEYHHNKPMSVRACAQRLSTILYSKRFFPYYVHAILAGVDEEG 154
Query: 117 KPFICTMDSIGA 128
K + + D +G+
Sbjct: 155 KGALYSYDPVGS 166
>gi|361131660|gb|EHL03312.1| putative proteasome component C5 [Glarea lozoyensis 74030]
Length = 263
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 7 NGSALVAMVGKNCFAIASDRRL--GVQLQT------IATDFQRISKIHDRLFIGLSGLAT 58
NG + +A+ G + IA D R G + T S+ L + + G A
Sbjct: 39 NGGSTLAISGNDFTIIAGDTRSTSGYNINTRYSPKVFKIGGTTSSQDDATLVLSVVGFAA 98
Query: 59 DSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKP 118
D L +RL K+Y+ + + M + A +S +LY KRF PY+ ++ GL +E K
Sbjct: 99 DGAALKERLDAIVKMYRYQHGKPMSVKACAQRLSTILYGKRFFPYYVTAILGGLDEEGKG 158
Query: 119 FICTMDSIGA 128
+ + D +G+
Sbjct: 159 AVYSYDPVGS 168
>gi|320582525|gb|EFW96742.1| Beta 6 subunit of the 20S proteasome [Ogataea parapolymorpha DL-1]
Length = 226
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 34 TIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQRLVFRHKL--YQLREERDMKPETFASL 90
+I T ++ ++ + + L + +G A DS L + VF+++L Y + M ++ A
Sbjct: 39 SINTRYEPKVFDVGNNLLLTANGFAADSAQLIK--VFKNQLEWYHFDHNKPMSTQSAARF 96
Query: 91 VSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGA 128
+ LLY KRF PY+ ++ GL +E K I + D +G+
Sbjct: 97 IQHLLYGKRFFPYYVHTILGGLDEEGKGAIYSFDPVGS 134
>gi|389847077|ref|YP_006349316.1| proteasome beta subunit [Haloferax mediterranei ATCC 33500]
gi|448614975|ref|ZP_21664003.1| proteasome beta subunit [Haloferax mediterranei ATCC 33500]
gi|388244383|gb|AFK19329.1| proteasome beta subunit [Haloferax mediterranei ATCC 33500]
gi|445753062|gb|EMA04481.1| proteasome beta subunit [Haloferax mediterranei ATCC 33500]
Length = 245
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + +A+D R + + D Q++ +IH R + ++G + +Q+L L
Sbjct: 49 GTTTVGIKTDEGVVLATDMRASLGHMVSSKDVQKVEEIHPRGALTIAGSVSAAQSLISSL 108
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+LY+ R DM + ++LV L F Y QP++ G+ DE I ++D G
Sbjct: 109 RAEVRLYESRRGEDMSMQALSTLVGNFLRSGGF--YIVQPILGGVDDE-GAHIYSIDPAG 165
Query: 128 A 128
+
Sbjct: 166 S 166
>gi|414886156|tpg|DAA62170.1| TPA: hypothetical protein ZEAMMB73_205941 [Zea mays]
Length = 213
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 59/132 (44%), Gaps = 8/132 (6%)
Query: 24 SDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMK 83
S RR L A+ R + + R SG D + L++ L R LYQ + + M
Sbjct: 25 SSRRTPASLSDTAS--SRATTL--RSATSSSGFQGDIKALHKNLAARELLYQHQHNKRMS 80
Query: 84 PETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGA----KYVGSLQKILL 139
A L+S LY KRF PY+ V+ GL E K + T D++G+ Y L
Sbjct: 81 CPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGSTL 140
Query: 140 LLELLESLFMVP 151
++ +L++ P
Sbjct: 141 IMPVLDNQLKSP 152
>gi|241954356|ref|XP_002419899.1| proteasome component, putative [Candida dubliniensis CD36]
gi|223643240|emb|CAX42114.1| proteasome component, putative [Candida dubliniensis CD36]
Length = 245
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 11/128 (8%)
Query: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHD---RLFIGLSGLATDSQTL 63
NG ++ + G++ +A D R Q++ + + SKIHD + + +G A D L
Sbjct: 31 NGGTVLGIAGEDFAVLAGDTR---QVEGYSIQSRYESKIHDVGDDILMTANGFAADGIAL 87
Query: 64 YQRLVFRHKLYQLREERDMKP---ETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFI 120
R F+ L + + + K ++ A + LLY KR PY+ +IAGL +E K +
Sbjct: 88 IDR--FKQSLIWYKFDNNGKKLAIKSAARYIQQLLYGKRLFPYYVSTLIAGLDEEGKGAV 145
Query: 121 CTMDSIGA 128
+ D +G+
Sbjct: 146 YSYDPVGS 153
>gi|386002905|ref|YP_005921204.1| proteasome subunit beta [Methanosaeta harundinacea 6Ac]
gi|357210961|gb|AET65581.1| Proteasome subunit beta [Methanosaeta harundinacea 6Ac]
Length = 179
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 58/101 (57%), Gaps = 5/101 (4%)
Query: 36 ATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALL 95
+T Q+I +I DR+ + +G+ D+Q+L + + KLY ++ M SL+S +L
Sbjct: 7 STTAQKIYQIADRVGLTTAGVVGDAQSLVRMIQVESKLYNMQRGEPMTVRGTTSLLSNVL 66
Query: 96 YEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKYVGSLQK 136
+R+ P+ Q ++ G+ D+ P + ++D++G GS+Q+
Sbjct: 67 ASRRYFPFMVQLLLGGV-DKKGPQLFSLDALG----GSIQE 102
>gi|88602139|ref|YP_502317.1| proteasome endopeptidase complex [Methanospirillum hungatei JF-1]
gi|121724010|sp|Q2FQL8.1|PSB_METHJ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|88187601|gb|ABD40598.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanospirillum hungatei
JF-1]
Length = 209
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 64/121 (52%), Gaps = 1/121 (0%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V +V + +AS++R + ++I +I R+ + +G D+Q L + +
Sbjct: 10 GTTTVGIVFETGVVLASEKRATMGYLISNKTAKKIYQIAPRIGLTTAGGVGDAQQLARLM 69
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
LY++R + + + ++L+S +L+ R P++ Q +I G+ DE P + ++D++G
Sbjct: 70 TVEANLYEIRRGKRISVQAASTLLSNILHGNRMFPFYVQLLIGGV-DETGPVLFSVDAVG 128
Query: 128 A 128
Sbjct: 129 G 129
>gi|302688009|ref|XP_003033684.1| hypothetical protein SCHCODRAFT_66433 [Schizophyllum commune H4-8]
gi|300107379|gb|EFI98781.1| hypothetical protein SCHCODRAFT_66433 [Schizophyllum commune H4-8]
Length = 274
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 7 NGSALVAMVGKNCFAIASDRRL--GVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLY 64
NG ++A+ G + IA D R G +QT ++ ++ ++ + ++G A D T
Sbjct: 21 NGGTVLAIAGSDFSVIAGDTRQSEGYNIQTRYA--PKVHRLTNKAVLAVTGFAADGNTFV 78
Query: 65 QRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDE 115
++L R + Y ++M + A L+ +LY +RF P++ ++ G+ ++
Sbjct: 79 KKLKQRLEWYHHAHAKNMPLQAVARLIQTMLYGRRFFPFYVYIILGGIEED 129
>gi|397780986|ref|YP_006545459.1| proteasome beta subunit [Methanoculleus bourgensis MS2]
gi|396939488|emb|CCJ36743.1| proteasome beta subunit [Methanoculleus bourgensis MS2]
Length = 214
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 63/121 (52%), Gaps = 1/121 (0%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V ++ K+ +A++ R + + ++I KI R+ + +G D+Q L + +
Sbjct: 11 GTTTVGLIFKDGVVLATEMRATMGNLIASKRAKKIYKITPRIGMTTAGGVGDAQQLVRII 70
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
LY++R R M ++L+S L + R+ PY+ Q ++ G DE P + ++D++G
Sbjct: 71 QVECSLYEMRRGRTMSVGAASTLLSNYLNQNRYYPYYVQLLMGGF-DEGGPSVYSVDAMG 129
Query: 128 A 128
Sbjct: 130 G 130
>gi|14590176|ref|NP_142241.1| proteasome subunit beta [Pyrococcus horikoshii OT3]
gi|74570532|sp|O57983.1|PSB1_PYRHO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|3256634|dbj|BAA29317.1| 197aa long hypothetical proteasome beta subunit [Pyrococcus
horikoshii OT3]
Length = 197
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Query: 8 GSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRL 67
G+ V + K+ +A+D + + + ++I I DR+ I +G D Q + + L
Sbjct: 6 GTTTVGIKVKDGVILAADTQASLDHMVETLNIRKIIPITDRIAITTAGSVGDVQMIARIL 65
Query: 68 VFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIG 127
+ Y R M + A+L+S +L E ++ PY Q +I G DE P I +D G
Sbjct: 66 EAEARYYYFAWGRPMTTKAMANLLSNILNENKWFPYLVQIIIGGYVDE--PTIANLDPYG 123
Query: 128 A 128
Sbjct: 124 G 124
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.327 0.140 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,589,176,134
Number of Sequences: 23463169
Number of extensions: 96273390
Number of successful extensions: 240956
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1242
Number of HSP's successfully gapped in prelim test: 453
Number of HSP's that attempted gapping in prelim test: 239184
Number of HSP's gapped (non-prelim): 1716
length of query: 181
length of database: 8,064,228,071
effective HSP length: 133
effective length of query: 48
effective length of database: 9,238,593,890
effective search space: 443452506720
effective search space used: 443452506720
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 72 (32.3 bits)