BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030214
(181 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|297736490|emb|CBI25361.3| unnamed protein product [Vitis vinifera]
Length = 190
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 87/134 (64%), Positives = 105/134 (78%)
Query: 8 LSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQ 67
L+ S +SLKI KGDI++W VD SSDAIV+P NE +L GG AIH AAGP+L ACY+
Sbjct: 8 LALSPTSSLKIQKGDITKWFVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELVAACYK 67
Query: 68 IPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKAN 127
+PE +P +RCP GEARIT GFKLP +HVIHTVGP+++ NPE L+SAY NCLS+ K N
Sbjct: 68 VPEVRPGIRCPTGEARITQGFKLPAAHVIHTVGPIYDVDSNPEASLKSAYANCLSLAKEN 127
Query: 128 NIQYIAFPAISCGV 141
N+QYIAFPAISCGV
Sbjct: 128 NVQYIAFPAISCGV 141
>gi|225448685|ref|XP_002280352.1| PREDICTED: macro domain-containing protein VPA0103 [Vitis vinifera]
gi|147769460|emb|CAN70345.1| hypothetical protein VITISV_012577 [Vitis vinifera]
Length = 231
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 87/134 (64%), Positives = 105/134 (78%)
Query: 8 LSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQ 67
L+ S +SLKI KGDI++W VD SSDAIV+P NE +L GG AIH AAGP+L ACY+
Sbjct: 49 LALSPTSSLKIQKGDITKWFVDGSSDAIVNPANERMLGGGGADGAIHRAAGPELVAACYK 108
Query: 68 IPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKAN 127
+PE +P +RCP GEARIT GFKLP +HVIHTVGP+++ NPE L+SAY NCLS+ K N
Sbjct: 109 VPEVRPGIRCPTGEARITQGFKLPAAHVIHTVGPIYDVDSNPEASLKSAYANCLSLAKEN 168
Query: 128 NIQYIAFPAISCGV 141
N+QYIAFPAISCGV
Sbjct: 169 NVQYIAFPAISCGV 182
>gi|449491648|ref|XP_004158963.1| PREDICTED: macro domain-containing protein VPA0103-like [Cucumis
sativus]
Length = 247
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 85/131 (64%), Positives = 103/131 (78%)
Query: 11 STKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPE 70
S T+ I KGDI++W +D SSDAIV+P N+++L GG AIH AAGPDL +ACY + E
Sbjct: 68 SPSTACVIQKGDITKWFIDGSSDAIVNPANQVMLGGGGADGAIHNAAGPDLVQACYSVQE 127
Query: 71 AQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQ 130
QP +RCP GEARITPGF+LP SHVIHTVGP++N NP+ +LRSAY+N L+V K NNIQ
Sbjct: 128 VQPGIRCPTGEARITPGFQLPASHVIHTVGPIYNASRNPQALLRSAYRNSLAVAKENNIQ 187
Query: 131 YIAFPAISCGV 141
YIAFPAISCGV
Sbjct: 188 YIAFPAISCGV 198
>gi|449457407|ref|XP_004146440.1| PREDICTED: macro domain-containing protein VPA0103-like [Cucumis
sativus]
Length = 247
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 85/131 (64%), Positives = 103/131 (78%)
Query: 11 STKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPE 70
S T+ I KGDI++W +D SSDAIV+P N+++L GG AIH AAGPDL +ACY + E
Sbjct: 68 SPSTACVIQKGDITKWFIDGSSDAIVNPANQVMLGGGGADGAIHNAAGPDLIQACYSVQE 127
Query: 71 AQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQ 130
QP +RCP GEARITPGF+LP SHVIHTVGP++N NP+ +LRSAY+N L+V K NNIQ
Sbjct: 128 VQPGIRCPTGEARITPGFQLPASHVIHTVGPIYNASRNPQALLRSAYRNSLAVAKENNIQ 187
Query: 131 YIAFPAISCGV 141
YIAFPAISCGV
Sbjct: 188 YIAFPAISCGV 198
>gi|255559685|ref|XP_002520862.1| Protein LRP16, putative [Ricinus communis]
gi|223539993|gb|EEF41571.1| Protein LRP16, putative [Ricinus communis]
Length = 269
Score = 184 bits (468), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 84/132 (63%), Positives = 105/132 (79%)
Query: 10 FSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIP 69
S+ + LKI+KGDI++W VD SSDAIV+P NE +L GG AIH AAGP+L ACY++P
Sbjct: 89 LSSSSVLKINKGDITKWFVDGSSDAIVNPANEKMLGGGGADGAIHRAAGPELVDACYKVP 148
Query: 70 EAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNI 129
E +P +RCP GEARITPGFKLP SHVIHTVGP+++ + N IL++AY+N LSV K NNI
Sbjct: 149 EVRPGIRCPTGEARITPGFKLPASHVIHTVGPIYDANRNSAAILKNAYRNSLSVAKDNNI 208
Query: 130 QYIAFPAISCGV 141
++IAFPAISCGV
Sbjct: 209 KFIAFPAISCGV 220
>gi|23397339|gb|AAK93649.2| unknown protein [Arabidopsis thaliana]
Length = 239
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 83/134 (61%), Positives = 102/134 (76%)
Query: 8 LSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQ 67
+ S + LKI KGDI++W VD SSDAIV+P NE +L GG AIH AAGP L+ ACY+
Sbjct: 56 FNLSDSSLLKILKGDITKWSVDSSSDAIVNPANERMLGGGGADGAIHRAAGPQLRAACYE 115
Query: 68 IPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKAN 127
+PE +PRVRCP GEARITPGF LP S VIHTVGP+++ NP++ L ++YKN L V K N
Sbjct: 116 VPEVRPRVRCPTGEARITPGFNLPASRVIHTVGPIYDSDVNPQESLTNSYKNSLRVAKEN 175
Query: 128 NIQYIAFPAISCGV 141
NI+YIAFPAISCG+
Sbjct: 176 NIKYIAFPAISCGI 189
>gi|297827693|ref|XP_002881729.1| hypothetical protein ARALYDRAFT_483117 [Arabidopsis lyrata subsp.
lyrata]
gi|297327568|gb|EFH57988.1| hypothetical protein ARALYDRAFT_483117 [Arabidopsis lyrata subsp.
lyrata]
Length = 256
Score = 181 bits (460), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 82/134 (61%), Positives = 101/134 (75%)
Query: 8 LSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQ 67
+ S + LKI KGDI++W VD SSDAIV+P NE +L GG AIH AAGP L+ ACY+
Sbjct: 73 FNLSDSSLLKILKGDITKWSVDSSSDAIVTPANERMLGGGGADGAIHRAAGPQLRAACYE 132
Query: 68 IPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKAN 127
+PE +P VRCP GEAR+TPGF LP S VIHTVGP+++ NP++ L +AYKN L V K N
Sbjct: 133 VPEVRPGVRCPTGEARVTPGFNLPASRVIHTVGPIYDSDVNPQESLTNAYKNSLRVAKEN 192
Query: 128 NIQYIAFPAISCGV 141
NI+YIAFPAISCG+
Sbjct: 193 NIKYIAFPAISCGI 206
>gi|357436403|ref|XP_003588477.1| Appr-1-p processing enzyme family protein [Medicago truncatula]
gi|355477525|gb|AES58728.1| Appr-1-p processing enzyme family protein [Medicago truncatula]
gi|388499270|gb|AFK37701.1| unknown [Medicago truncatula]
Length = 233
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 83/132 (62%), Positives = 98/132 (74%)
Query: 10 FSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIP 69
S+ +L I KGDI++W +D S+DAIV+P NE +L GG AIH AAGPDL +AC +P
Sbjct: 53 LSSSNALIIQKGDITKWSIDGSTDAIVNPANERMLGGGGADGAIHRAAGPDLLRACRNVP 112
Query: 70 EAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNI 129
E +P VRCP GEARITPGF LP SHVIHTVGP+++ NP L SAY+N L V K NNI
Sbjct: 113 EVRPGVRCPTGEARITPGFLLPASHVIHTVGPIYDVDSNPAASLASAYRNSLRVAKENNI 172
Query: 130 QYIAFPAISCGV 141
QYIAFPAISCGV
Sbjct: 173 QYIAFPAISCGV 184
>gi|30688336|ref|NP_030605.2| appr-1-p processing enzyme family protein [Arabidopsis thaliana]
gi|24030242|gb|AAN41297.1| unknown protein [Arabidopsis thaliana]
gi|330254759|gb|AEC09853.1| appr-1-p processing enzyme family protein [Arabidopsis thaliana]
Length = 257
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 82/134 (61%), Positives = 101/134 (75%)
Query: 8 LSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQ 67
+ S + LKI KGDI++W VD SSDAIV+P NE +L GG AIH AAGP L+ ACY+
Sbjct: 74 FNLSDSSLLKILKGDITKWSVDSSSDAIVNPANERMLGGGGADGAIHRAAGPQLRAACYE 133
Query: 68 IPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKAN 127
+PE +P VRCP GEARITPGF LP S VIHTVGP+++ NP++ L ++YKN L V K N
Sbjct: 134 VPEVRPGVRCPTGEARITPGFNLPASRVIHTVGPIYDSDVNPQESLTNSYKNSLRVAKEN 193
Query: 128 NIQYIAFPAISCGV 141
NI+YIAFPAISCG+
Sbjct: 194 NIKYIAFPAISCGI 207
>gi|20196872|gb|AAB87596.2| expressed protein [Arabidopsis thaliana]
Length = 193
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 82/134 (61%), Positives = 101/134 (75%)
Query: 8 LSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQ 67
+ S + LKI KGDI++W VD SSDAIV+P NE +L GG AIH AAGP L+ ACY+
Sbjct: 10 FNLSDSSLLKILKGDITKWSVDSSSDAIVNPANERMLGGGGADGAIHRAAGPQLRAACYE 69
Query: 68 IPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKAN 127
+PE +P VRCP GEARITPGF LP S VIHTVGP+++ NP++ L ++YKN L V K N
Sbjct: 70 VPEVRPGVRCPTGEARITPGFNLPASRVIHTVGPIYDSDVNPQESLTNSYKNSLRVAKEN 129
Query: 128 NIQYIAFPAISCGV 141
NI+YIAFPAISCG+
Sbjct: 130 NIKYIAFPAISCGI 143
>gi|224126573|ref|XP_002319871.1| predicted protein [Populus trichocarpa]
gi|222858247|gb|EEE95794.1| predicted protein [Populus trichocarpa]
Length = 180
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/126 (65%), Positives = 97/126 (76%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
LKISKGDI++W VD SSDAIV+P NE +L GG AIH AAGP L+ ACY +PE +P V
Sbjct: 6 LKISKGDITKWSVDGSSDAIVNPANERMLGGGGADGAIHRAAGPQLRDACYTVPEVRPGV 65
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFP 135
RCP GEARITPGF LP VIHTVGP+++ NPE LR+AY+N L + K NNI+YIAFP
Sbjct: 66 RCPTGEARITPGFNLPAFRVIHTVGPIYDVDGNPEASLRNAYRNSLILAKDNNIKYIAFP 125
Query: 136 AISCGV 141
AISCGV
Sbjct: 126 AISCGV 131
>gi|297827695|ref|XP_002881730.1| hypothetical protein ARALYDRAFT_903355 [Arabidopsis lyrata subsp.
lyrata]
gi|297327569|gb|EFH57989.1| hypothetical protein ARALYDRAFT_903355 [Arabidopsis lyrata subsp.
lyrata]
Length = 220
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 81/126 (64%), Positives = 96/126 (76%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
LKI +GDI+ W VD SSDAIV+P NE +L G AIH+AAGP L+ ACY++PE P V
Sbjct: 18 LKIVQGDITNWSVDGSSDAIVNPANERMLGGNGADGAIHDAAGPQLRAACYEVPEVSPGV 77
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFP 135
RCP GE+RITPGF LP SHVIHTVGP++N NP+ +L SAYKN L V K NNI+YIAF
Sbjct: 78 RCPTGESRITPGFNLPASHVIHTVGPIYNAEKNPKKLLESAYKNSLRVAKENNIRYIAFT 137
Query: 136 AISCGV 141
AISCG+
Sbjct: 138 AISCGI 143
>gi|356552646|ref|XP_003544674.1| PREDICTED: macro domain-containing protein XCC3184-like [Glycine
max]
Length = 236
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 82/137 (59%), Positives = 98/137 (71%)
Query: 5 VQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKA 64
V S ++L + KGDI++W +D S+DAIV+P NE +L GG AIH AAGP L +A
Sbjct: 51 VVRFPLSASSALFMQKGDITKWSIDGSTDAIVNPANERMLGGGGADGAIHRAAGPQLVEA 110
Query: 65 CYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVG 124
C +PE +P VRCP GEARITPGF LP SHVIHTVGP+++ NP L SAY+N L V
Sbjct: 111 CRTVPEIRPGVRCPTGEARITPGFMLPASHVIHTVGPIYSADINPAASLASAYRNTLMVA 170
Query: 125 KANNIQYIAFPAISCGV 141
K NNIQYIAFPAISCGV
Sbjct: 171 KENNIQYIAFPAISCGV 187
>gi|255636888|gb|ACU18777.1| unknown [Glycine max]
Length = 201
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 82/137 (59%), Positives = 98/137 (71%)
Query: 5 VQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKA 64
V S ++L + KGDI++W +D S+DAIV+P NE +L GG AIH AAGP L +A
Sbjct: 16 VVRFPLSASSALFMQKGDITKWSIDGSTDAIVNPANERMLGGGGADGAIHRAAGPQLVEA 75
Query: 65 CYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVG 124
C +PE +P VRCP GEARITPGF LP SHVIHTVGP+++ NP L SAY+N L V
Sbjct: 76 CRTVPEIRPGVRCPTGEARITPGFMLPASHVIHTVGPIYSADINPAASLASAYRNTLMVA 135
Query: 125 KANNIQYIAFPAISCGV 141
K NNIQYIAFPAISCGV
Sbjct: 136 KENNIQYIAFPAISCGV 152
>gi|255559681|ref|XP_002520860.1| Protein LRP16, putative [Ricinus communis]
gi|223539991|gb|EEF41569.1| Protein LRP16, putative [Ricinus communis]
Length = 220
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 97/131 (74%)
Query: 10 FSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIP 69
S+ + LK+ KG I++W VD SDAIV+ TNE+++ GG AIH AAGP L+ ACY IP
Sbjct: 30 LSSSSLLKVHKGSITKWSVDGRSDAIVNSTNELMIAGGGADLAIHRAAGPKLRDACYDIP 89
Query: 70 EAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNI 129
E QP VRC G+ARITPGF+LP S VIHTVGP++ + NP+ LR+AY+N L + KAN I
Sbjct: 90 EIQPGVRCSTGQARITPGFRLPASRVIHTVGPIYFYDNNPQASLRNAYRNSLKLAKANKI 149
Query: 130 QYIAFPAISCG 140
+YIAFPA+ CG
Sbjct: 150 RYIAFPAVCCG 160
>gi|242041011|ref|XP_002467900.1| hypothetical protein SORBIDRAFT_01g036100 [Sorghum bicolor]
gi|241921754|gb|EER94898.1| hypothetical protein SORBIDRAFT_01g036100 [Sorghum bicolor]
Length = 200
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/127 (59%), Positives = 96/127 (75%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+LK+ KGDI+ W VD ++DAIV+ NE +L GG AIH AAGP+L +AC ++PE +P
Sbjct: 22 TLKLHKGDITLWSVDGATDAIVNAANERMLGGGGVDGAIHRAAGPELVQACRKVPEVKPG 81
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
VRCP GEARITP F+LPVS VIHTVGP+++ +PE L+ AY+N L + K N IQYIAF
Sbjct: 82 VRCPTGEARITPAFELPVSRVIHTVGPIYDMDKHPEVSLKKAYENSLKLAKDNGIQYIAF 141
Query: 135 PAISCGV 141
PAISCGV
Sbjct: 142 PAISCGV 148
>gi|357112330|ref|XP_003557962.1| PREDICTED: macro domain-containing protein VPA0103-like
[Brachypodium distachyon]
Length = 239
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/126 (61%), Positives = 93/126 (73%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
LK+ KGDI+ W VD ++DAIV+ NE +L GG AIH AAGP L +AC ++PE +P V
Sbjct: 62 LKLHKGDITLWSVDGATDAIVNAANERMLGGGGVDGAIHRAAGPQLVEACRKVPEVEPGV 121
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFP 135
RCP GEARITP FKLPVS VIHTVGP+++ PE L++AY N L + K N IQYIAFP
Sbjct: 122 RCPTGEARITPAFKLPVSSVIHTVGPIYDMDRQPEVSLKNAYANSLKLAKENGIQYIAFP 181
Query: 136 AISCGV 141
AISCGV
Sbjct: 182 AISCGV 187
>gi|223974181|gb|ACN31278.1| unknown [Zea mays]
Length = 316
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 75/126 (59%), Positives = 95/126 (75%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
LK+ KGDI+ W VD ++DAIV+ NE +L GG AIH+AAGP+L +AC ++PE +P V
Sbjct: 139 LKLHKGDITLWSVDCATDAIVNAANERMLGGGGVDGAIHQAAGPELVQACRKVPEVKPGV 198
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFP 135
RCP GEARITP F+LP S VIHTVGP+++ +PE L+ AY+N L + K N IQYIAFP
Sbjct: 199 RCPTGEARITPAFELPASRVIHTVGPIYDLDKHPEVSLKKAYENSLKLAKDNGIQYIAFP 258
Query: 136 AISCGV 141
AISCGV
Sbjct: 259 AISCGV 264
>gi|326527399|dbj|BAK04641.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 200
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/133 (57%), Positives = 98/133 (73%)
Query: 9 SFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQI 68
S + +LK+ KGDI+ W VD ++DAIV+ NE +L GG AIH+AAGP L +AC ++
Sbjct: 16 SAAGAGALKLHKGDITLWSVDGATDAIVNAANERMLGGGGVDGAIHQAAGPQLVEACRKV 75
Query: 69 PEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANN 128
PE +P VRCP GEARITP F+LPVS VIHTVGP+++ PE L++AY+N L + K N
Sbjct: 76 PEVKPGVRCPTGEARITPAFELPVSRVIHTVGPIYDMDRKPEVSLKNAYENSLKLAKENG 135
Query: 129 IQYIAFPAISCGV 141
IQYIAFPAISCG+
Sbjct: 136 IQYIAFPAISCGI 148
>gi|241865263|gb|ACS68709.1| appr-1-p processing enzyme family protein [Sonneratia alba]
gi|241865496|gb|ACS68780.1| appr-1-p processing enzyme family protein [Sonneratia alba]
Length = 139
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/114 (68%), Positives = 90/114 (78%)
Query: 28 VDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPG 87
VD SDAIV+P NE +L GG AIH AAGP+L +ACY++PE P +RCP GEARITPG
Sbjct: 1 VDGYSDAIVNPANERMLGGGGADGAIHRAAGPELLEACYKVPEVCPGIRCPTGEARITPG 60
Query: 88 FKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
FKLP SHVIHTVGP+++ +PE LRSAYKN L+V K NNIQYIAFPAISCGV
Sbjct: 61 FKLPASHVIHTVGPIYDTDKDPEASLRSAYKNSLAVAKENNIQYIAFPAISCGV 114
>gi|307135847|gb|ADN33717.1| appr-1-p processing enzyme family protein [Cucumis melo subsp.
melo]
Length = 255
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 72/107 (67%), Positives = 86/107 (80%)
Query: 35 IVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPVSH 94
+V+P NE++L GG AIH AAGPDL +ACY + E QP +RCP GEARITPGF+LP SH
Sbjct: 103 LVNPANEVMLGGGGADGAIHNAAGPDLVRACYSVQEVQPGIRCPTGEARITPGFRLPASH 162
Query: 95 VIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
VIHTVGP++N NP+ +LRSAY+N L+V K NNIQYIAFPAISCGV
Sbjct: 163 VIHTVGPIYNASRNPQALLRSAYRNSLAVAKENNIQYIAFPAISCGV 209
>gi|194692890|gb|ACF80529.1| unknown [Zea mays]
Length = 200
Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 75/126 (59%), Positives = 95/126 (75%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
LK+ KGDI+ W VD ++DAIV+ NE +L GG AIH+AAGP+L +AC ++PE +P V
Sbjct: 23 LKLHKGDITLWSVDCATDAIVNAANERMLGGGGVDGAIHQAAGPELVQACRKVPEVKPGV 82
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFP 135
RCP GEARITP F+LP S VIHTVGP+++ +PE L+ AY+N L + K N IQYIAFP
Sbjct: 83 RCPTGEARITPAFELPASRVIHTVGPIYDLDKHPEVSLKKAYENSLKLAKDNGIQYIAFP 142
Query: 136 AISCGV 141
AISCGV
Sbjct: 143 AISCGV 148
>gi|195607278|gb|ACG25469.1| protein LRP16 [Zea mays]
Length = 239
Score = 161 bits (408), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 75/126 (59%), Positives = 95/126 (75%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
LK+ KGDI+ W VD ++DAIV+ NE +L GG AIH+AAGP+L +AC ++PE +P V
Sbjct: 62 LKLHKGDITLWSVDCATDAIVNAANERMLGGGGVDGAIHQAAGPELVQACRKVPEVKPGV 121
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFP 135
RCP GEARITP F+LP S VIHTVGP+++ +PE L+ AY+N L + K N IQYIAFP
Sbjct: 122 RCPTGEARITPAFELPASRVIHTVGPIYDLDKHPEVSLKKAYENSLKLAKDNGIQYIAFP 181
Query: 136 AISCGV 141
AISCGV
Sbjct: 182 AISCGV 187
>gi|414866681|tpg|DAA45238.1| TPA: protein LRP16 [Zea mays]
Length = 253
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/126 (59%), Positives = 95/126 (75%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
LK+ KGDI+ W VD ++DAIV+ NE +L GG AIH+AAGP+L +AC ++PE +P V
Sbjct: 76 LKLHKGDITLWSVDCATDAIVNAANERMLGGGGVDGAIHQAAGPELVQACRKVPEVKPGV 135
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFP 135
RCP GEARITP F+LP S VIHTVGP+++ +PE L+ AY+N L + K N IQYIAFP
Sbjct: 136 RCPTGEARITPAFELPASRVIHTVGPIYDLDKHPEVSLKKAYENSLKLAKDNGIQYIAFP 195
Query: 136 AISCGV 141
AISCGV
Sbjct: 196 AISCGV 201
>gi|414866682|tpg|DAA45239.1| TPA: hypothetical protein ZEAMMB73_411350 [Zea mays]
Length = 253
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 97/130 (74%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
LK+ KGDI+ W VD ++DAIV+ NE +L GG AIH+AAGP+L +AC ++PE +P V
Sbjct: 76 LKLHKGDITLWSVDCATDAIVNAANERMLGGGGVDGAIHQAAGPELVQACRKVPEVKPGV 135
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFP 135
RCP GEARITP F+LP S VIHTVGP+++ +PE L+ AY+N L + K N IQYIAFP
Sbjct: 136 RCPTGEARITPAFELPASRVIHTVGPIYDLDKHPEVSLKKAYENSLKLAKDNGIQYIAFP 195
Query: 136 AISCGVSQIM 145
AISCGV + +
Sbjct: 196 AISCGVYRYV 205
>gi|212722698|ref|NP_001131908.1| uncharacterized protein LOC100193297 [Zea mays]
gi|195622460|gb|ACG33060.1| protein LRP16 [Zea mays]
Length = 239
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 74/126 (58%), Positives = 94/126 (74%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
LK+ KGDI+ W VD ++DAIV+ NE +L GG AIH+AAGP+L +AC ++PE +P V
Sbjct: 62 LKLHKGDITLWSVDCATDAIVNAANERMLGGGGVDGAIHQAAGPELVQACRKVPEVKPGV 121
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFP 135
RCP GEARITP F+LP S VIHT GP+++ +PE L+ AY+N L + K N IQYIAFP
Sbjct: 122 RCPTGEARITPAFELPASRVIHTFGPIYDLDKHPEVSLKKAYENSLKLAKDNGIQYIAFP 181
Query: 136 AISCGV 141
AISCGV
Sbjct: 182 AISCGV 187
>gi|297600869|ref|NP_001050042.2| Os03g0336500 [Oryza sativa Japonica Group]
gi|108708026|gb|ABF95821.1| expressed protein [Oryza sativa Japonica Group]
gi|218192780|gb|EEC75207.1| hypothetical protein OsI_11466 [Oryza sativa Indica Group]
gi|222624883|gb|EEE59015.1| hypothetical protein OsJ_10756 [Oryza sativa Japonica Group]
gi|255674479|dbj|BAF11956.2| Os03g0336500 [Oryza sativa Japonica Group]
Length = 201
Score = 158 bits (400), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 74/127 (58%), Positives = 91/127 (71%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+LK+ KGDI+ W VD ++DAIV+ NE +L GG AIH AGP+L +AC ++PE +
Sbjct: 23 ALKLQKGDITLWSVDGATDAIVNAANERMLGGGGVDGAIHRTAGPELVEACRKVPEVKSG 82
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
VRCP GEARITP FKLPVS VIHTVGP+++ PE L +AY N L + K N IQYIA
Sbjct: 83 VRCPTGEARITPAFKLPVSRVIHTVGPIYDMDKQPEVSLNNAYTNSLKLAKQNGIQYIAL 142
Query: 135 PAISCGV 141
PAISCGV
Sbjct: 143 PAISCGV 149
>gi|224286182|gb|ACN40801.1| unknown [Picea sitchensis]
Length = 204
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 71/140 (50%), Positives = 99/140 (70%), Gaps = 2/140 (1%)
Query: 4 KVQTLSFSTKTS--LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDL 61
+ + +S+ + S L I +GDI++W ++ +DAIV+ NE++L GG AIH AAGP+L
Sbjct: 8 ETEIVSYKLRDSCTLVIHQGDITKWFINGENDAIVNAANELMLGGGGVDGAIHSAAGPEL 67
Query: 62 QKACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCL 121
+AC +PE QP VRCP G ARIT F LPVSH+IHTVGP+++ + +L SAYK+ L
Sbjct: 68 LRACLNVPEIQPGVRCPAGSARITEAFNLPVSHIIHTVGPIYDEEGDSASVLSSAYKSSL 127
Query: 122 SVGKANNIQYIAFPAISCGV 141
V + N+I+Y+AFPAISCGV
Sbjct: 128 EVAEENHIKYVAFPAISCGV 147
>gi|148908718|gb|ABR17466.1| unknown [Picea sitchensis]
Length = 231
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/126 (54%), Positives = 89/126 (70%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L + +GDI++W VD +DAIV+ NE LL GG AIH AAGPDL KAC Q P+ +
Sbjct: 56 LLLHRGDITKWTVDGHTDAIVNAANERLLGGGGVDGAIHRAAGPDLLKACRQFPKVSRGI 115
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFP 135
RCP G ARIT GF LPVS +IHTVGPV++ +PE L AY++ L++ + N ++YIAFP
Sbjct: 116 RCPVGSARITRGFNLPVSRIIHTVGPVYDMEEDPESKLADAYRSSLNITRENEVKYIAFP 175
Query: 136 AISCGV 141
AISCG+
Sbjct: 176 AISCGI 181
>gi|255559683|ref|XP_002520861.1| Protein LRP16, putative [Ricinus communis]
gi|223539992|gb|EEF41570.1| Protein LRP16, putative [Ricinus communis]
Length = 217
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/140 (52%), Positives = 93/140 (66%)
Query: 1 MTFKVQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPD 60
MT S+ LK+++G+I+ W V+ SSDAIV+ TN ++ G A IHEAAGP
Sbjct: 18 MTSSEVVFPLSSSCLLKLNRGNITNWFVNSSSDAIVNSTNMLMHALGGADADIHEAAGPR 77
Query: 61 LQKACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNC 120
L AC IP + +RCP GEARIT GF+LPVS VIHTVGPV + NP LR+AY+N
Sbjct: 78 LAYACDDIPVVRDEIRCPTGEARITHGFELPVSRVIHTVGPVHSDDRNPALSLRNAYRNS 137
Query: 121 LSVGKANNIQYIAFPAISCG 140
L + KAN IQY+AFPA+ CG
Sbjct: 138 LELAKANEIQYVAFPAVCCG 157
>gi|168021720|ref|XP_001763389.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685524|gb|EDQ71919.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 201
Score = 145 bits (365), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 89/127 (70%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+L + +GDI++W D +DAIV+ NE++L GG AIH AAG L +AC ++PE
Sbjct: 18 TLALHRGDITKWSKDGRTDAIVNAANEMMLGGGGVDGAIHRAAGRKLYEACMKVPEVSRG 77
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
VRCP G A ITPGFKLPVS VIHTVGP+++ +P +L AYK +SV K + +++IAF
Sbjct: 78 VRCPVGSAVITPGFKLPVSRVIHTVGPMYHKEADPAFVLSKAYKKSISVAKKDKVKHIAF 137
Query: 135 PAISCGV 141
PAISCG+
Sbjct: 138 PAISCGI 144
>gi|302769662|ref|XP_002968250.1| hypothetical protein SELMODRAFT_16132 [Selaginella moellendorffii]
gi|300163894|gb|EFJ30504.1| hypothetical protein SELMODRAFT_16132 [Selaginella moellendorffii]
Length = 166
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/139 (49%), Positives = 85/139 (61%), Gaps = 2/139 (1%)
Query: 5 VQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKA 64
V + L I GDI+RW D SDAIV+ NE++L GG AIHEAAGPDL KA
Sbjct: 1 VAEFELTDSCKLVIQGGDITRWFKDGHSDAIVNAANELMLGGGGVDGAIHEAAGPDLYKA 60
Query: 65 CYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNF--HCNPEDILRSAYKNCLS 122
C +P PR RCP G+AR TP F+LPV +IHTVGP ++ +LR AY N L
Sbjct: 61 CKTLPLVAPRTRCPVGQARETPAFRLPVRRIIHTVGPTYHRSTRMKAAALLRDAYCNSLE 120
Query: 123 VGKANNIQYIAFPAISCGV 141
+ + ++ IAFPAISCGV
Sbjct: 121 LAREKGVKCIAFPAISCGV 139
>gi|414866684|tpg|DAA45241.1| TPA: hypothetical protein ZEAMMB73_411350 [Zea mays]
Length = 249
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/126 (55%), Positives = 90/126 (71%), Gaps = 4/126 (3%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
LK+ KGDI+ W VD ++DAIV+ NE +L + AAGP+L +AC ++PE +P V
Sbjct: 76 LKLHKGDITLWSVDCATDAIVNAANERML----GGGGVDGAAGPELVQACRKVPEVKPGV 131
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFP 135
RCP GEARITP F+LP S VIHTVGP+++ +PE L+ AY+N L + K N IQYIAFP
Sbjct: 132 RCPTGEARITPAFELPASRVIHTVGPIYDLDKHPEVSLKKAYENSLKLAKDNGIQYIAFP 191
Query: 136 AISCGV 141
AISCGV
Sbjct: 192 AISCGV 197
>gi|302788716|ref|XP_002976127.1| hypothetical protein SELMODRAFT_16123 [Selaginella moellendorffii]
gi|300156403|gb|EFJ23032.1| hypothetical protein SELMODRAFT_16123 [Selaginella moellendorffii]
Length = 166
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/139 (48%), Positives = 85/139 (61%), Gaps = 2/139 (1%)
Query: 5 VQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKA 64
V + L I GDI+RW D SDAIV+ NE++L GG AIH+AAGPDL KA
Sbjct: 1 VAEFELTDSCKLVIQGGDITRWFKDGHSDAIVNAANELMLGGGGVDGAIHDAAGPDLYKA 60
Query: 65 CYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNF--HCNPEDILRSAYKNCLS 122
C +P PR RCP G+AR TP F+LPV +IHTVGP ++ +LR AY N L
Sbjct: 61 CKTLPLVAPRTRCPVGQARETPAFRLPVRRIIHTVGPTYHRSTRMKAAALLRDAYCNSLE 120
Query: 123 VGKANNIQYIAFPAISCGV 141
+ + ++ IAFPAISCG+
Sbjct: 121 LAREKGVKCIAFPAISCGI 139
>gi|168032733|ref|XP_001768872.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679784|gb|EDQ66226.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 207
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/127 (48%), Positives = 86/127 (67%), Gaps = 1/127 (0%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+L + +GDI++W +D +DAIV+ NE ++ GG AIH AAG L +A +IP ++
Sbjct: 29 ALVLQRGDITKWHIDGKTDAIVNAANERMVGGGGVDGAIHAAAGKQLLEATKKIPISEG- 87
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
VRCP G A +TPGFKLPVS +IHTVGP++ NP +L A+K + + N ++YIAF
Sbjct: 88 VRCPVGSAVLTPGFKLPVSKIIHTVGPIYYIEGNPASLLAKAHKESVRLATENGLKYIAF 147
Query: 135 PAISCGV 141
PAISCGV
Sbjct: 148 PAISCGV 154
>gi|298715515|emb|CBJ28085.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 449
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 81/126 (64%), Gaps = 4/126 (3%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L IS GD+++W DA+V+ NE +L GG AIH AAG DL KACY + +
Sbjct: 53 LAISGGDLTKW----KGDAVVNAANEWMLGGGGVDGAIHRAAGRDLLKACYDVEPNSEDI 108
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFP 135
RCP GEARITPGF+LP VIHTVGPV+ +LRSA KN L + K N ++ +AFP
Sbjct: 109 RCPTGEARITPGFRLPAKFVIHTVGPVYENKEVSAPLLRSAIKNSLLLCKENGVKSVAFP 168
Query: 136 AISCGV 141
AISCGV
Sbjct: 169 AISCGV 174
>gi|302770290|ref|XP_002968564.1| hypothetical protein SELMODRAFT_89486 [Selaginella moellendorffii]
gi|300164208|gb|EFJ30818.1| hypothetical protein SELMODRAFT_89486 [Selaginella moellendorffii]
Length = 202
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 87/135 (64%), Gaps = 2/135 (1%)
Query: 9 SFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQI 68
+ L + GDI+ WC D SDAIV+ NE +L GG AIH+AAG +L++AC ++
Sbjct: 35 KLTESCKLVLQGGDITIWCKDGHSDAIVNAANERMLGGGGVDGAIHDAAGQELREACREL 94
Query: 69 PEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVF--NFHCNPEDILRSAYKNCLSVGKA 126
P +P VRCP G A TPGF+LPV+ +IHTVGP++ + +LR AY N L + +
Sbjct: 95 PLVEPGVRCPVGHAVETPGFELPVARIIHTVGPMYFKSSRVKAAALLRDAYHNSLELARE 154
Query: 127 NNIQYIAFPAISCGV 141
+++IAFPAISCG+
Sbjct: 155 KGVKFIAFPAISCGI 169
>gi|422292780|gb|EKU20082.1| hypothetical protein NGA_2111400, partial [Nannochloropsis gaditana
CCMP526]
Length = 280
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 88/136 (64%), Gaps = 4/136 (2%)
Query: 6 QTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKAC 65
++ S + SL+IS GD+++ VD AIV+ NE +L GG A+H AAGP L +AC
Sbjct: 50 RSFPLSNRISLQISVGDLTKCSVD----AIVNAANERMLGGGGVDGAVHRAAGPQLYEAC 105
Query: 66 YQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGK 125
+PE +P VRCP GEARITPGFKLP +V+HTVGP++ +LR+++ + L +
Sbjct: 106 RAVPEVRPGVRCPTGEARITPGFKLPARYVVHTVGPIYKNDNESAALLRASHLSSLDLAV 165
Query: 126 ANNIQYIAFPAISCGV 141
+ +AFPA+SCG+
Sbjct: 166 KQGLTSVAFPAVSCGI 181
>gi|302788298|ref|XP_002975918.1| hypothetical protein SELMODRAFT_150946 [Selaginella moellendorffii]
gi|300156194|gb|EFJ22823.1| hypothetical protein SELMODRAFT_150946 [Selaginella moellendorffii]
Length = 224
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/129 (48%), Positives = 85/129 (65%), Gaps = 2/129 (1%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
L + GDI+ W D SDAIV+ NE +L GG AIH+AAGP+L+ AC ++P +P
Sbjct: 42 KLVLQGGDITIWRKDGHSDAIVNAANERMLGGGGVDGAIHDAAGPELRDACRELPLVEPG 101
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVF--NFHCNPEDILRSAYKNCLSVGKANNIQYI 132
VRCP G A TPGF LPV+ +IHTVGP++ + +LR AY+N L + + +++I
Sbjct: 102 VRCPVGHAVETPGFLLPVARIIHTVGPMYFKSSRVKAAALLRDAYRNSLELAREKGVKFI 161
Query: 133 AFPAISCGV 141
AFPAISCG+
Sbjct: 162 AFPAISCGI 170
>gi|302791511|ref|XP_002977522.1| hypothetical protein SELMODRAFT_107137 [Selaginella moellendorffii]
gi|300154892|gb|EFJ21526.1| hypothetical protein SELMODRAFT_107137 [Selaginella moellendorffii]
Length = 207
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 108/184 (58%), Gaps = 17/184 (9%)
Query: 6 QTLSF---STKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQ 62
Q L F S + L + +GDI++W +D SDAIV+ NE+++ GG AIH AAG +L
Sbjct: 15 QVLKFKLPSGECKLVLQRGDITKWKIDGESDAIVNAANELMMGGGGVDGAIHRAAGGELL 74
Query: 63 KACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE--DILRSAYKNC 120
+AC +P + VRC G A TPGF+LPV +IHTVGPV++ + L SAY+N
Sbjct: 75 RACRDLP-SHGGVRCGVGMAVETPGFQLPVRRIIHTVGPVYDKEVKDDCASYLASAYRNS 133
Query: 121 LSVGKANNIQYIAFPAISCGV--------SQIMTHAIKLQTNCGFLESFWV--ELSAKVT 170
+ + + ++YIAFPAISCG+ ++I + IK + + GF E +V E SA T
Sbjct: 134 IKLAREKGVKYIAFPAISCGIYGYPLDDAAKISLNTIK-ENSEGFSEIHFVLFEPSAWQT 192
Query: 171 TYDM 174
D+
Sbjct: 193 WVDL 196
>gi|302786702|ref|XP_002975122.1| hypothetical protein SELMODRAFT_102684 [Selaginella moellendorffii]
gi|300157281|gb|EFJ23907.1| hypothetical protein SELMODRAFT_102684 [Selaginella moellendorffii]
Length = 205
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 106/182 (58%), Gaps = 15/182 (8%)
Query: 6 QTLSF---STKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQ 62
Q L F S + L + +GDI++W +D SDAIV+ NE+++ GG AIH AAG +L
Sbjct: 15 QALKFKLPSGECKLVLQRGDITKWKIDGESDAIVNAANELMMGGGGVDGAIHRAAGGELL 74
Query: 63 KACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLS 122
+AC +P + VRC G A TPGF+LPV +IHTVGPV++ + +L +N +
Sbjct: 75 RACRDLP-SHGGVRCGVGMAVETPGFQLPVQRIIHTVGPVYDKEVKDDSLLLFLLRNSIK 133
Query: 123 VGKANNIQYIAFPAISCGV--------SQIMTHAIKLQTNCGFLESFWV--ELSAKVTTY 172
+ + ++YIAFPAISCG+ ++I + IK + + GF E +V E SA T
Sbjct: 134 LAREKGVKYIAFPAISCGIYGYPLDDAAKISLNTIK-ENSEGFSEIHFVLFEPSAWQTWV 192
Query: 173 DM 174
D+
Sbjct: 193 DL 194
>gi|389736233|ref|ZP_10189808.1| RNase III inhibitor [Rhodanobacter sp. 115]
gi|388439633|gb|EIL96139.1| RNase III inhibitor [Rhodanobacter sp. 115]
Length = 176
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/129 (52%), Positives = 80/129 (62%), Gaps = 7/129 (5%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
S+ + DI R VD AIV+ NE LL GG AIH AAGP L AC +PE
Sbjct: 2 SISVITADIVRLDVD----AIVNAANETLLGGGGVDGAIHRAAGPQLLAACRALPEVSAG 57
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFN--FHCNPEDILRSAYKNCLSVGKANNIQYI 132
VRCP GEARITPGF+LP VIHTVGPV++ H PE +L Y+ L + A+ +Q I
Sbjct: 58 VRCPTGEARITPGFELPARWVIHTVGPVWHGGHHGEPE-LLARCYRASLKLAMAHRVQSI 116
Query: 133 AFPAISCGV 141
AFPAISCGV
Sbjct: 117 AFPAISCGV 125
>gi|254482549|ref|ZP_05095788.1| Appr-1-p processing enzyme family protein [marine gamma
proteobacterium HTCC2148]
gi|214037240|gb|EEB77908.1| Appr-1-p processing enzyme family protein [marine gamma
proteobacterium HTCC2148]
Length = 172
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 85/128 (66%), Gaps = 5/128 (3%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
++K++ GDI+ VD AIV+ NE++L GG AIH AAGP+L C ++P A
Sbjct: 2 NNIKLTIGDITTAEVD----AIVNAANEVMLGGGGVDGAIHRAAGPELLAECRKVP-AMN 56
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
+RCP G+ARIT +LP S+VIHTVGPV++ NPE++L AY+N L + N Q IA
Sbjct: 57 GIRCPTGQARITGAGELPASYVIHTVGPVYDEAENPEELLALAYRNSLLLALENQCQSIA 116
Query: 134 FPAISCGV 141
FPAISCGV
Sbjct: 117 FPAISCGV 124
>gi|159484174|ref|XP_001700135.1| predicted protein [Chlamydomonas reinhardtii]
gi|158272631|gb|EDO98429.1| predicted protein [Chlamydomonas reinhardtii]
Length = 160
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 81/136 (59%), Gaps = 4/136 (2%)
Query: 6 QTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKAC 65
+T T L I +GDI+ VD AIV+ NE +L GG AIH AAGP L +AC
Sbjct: 4 RTFPLRQGTKLVIKQGDITVEDVD----AIVNAANERMLGGGGVDGAIHRAAGPQLVRAC 59
Query: 66 YQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGK 125
++PE P VRCP GEARITPGF L HVIHTVGP+++ +L SAY++ + +
Sbjct: 60 AEVPEVYPGVRCPTGEARITPGFHLKARHVIHTVGPIYHNDRVSAPLLASAYRSSVELAA 119
Query: 126 ANNIQYIAFPAISCGV 141
+ ++FP IS GV
Sbjct: 120 QQGLASLSFPGISTGV 135
>gi|307107260|gb|EFN55503.1| hypothetical protein CHLNCDRAFT_23080 [Chlorella variabilis]
Length = 194
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 81/122 (66%), Gaps = 4/122 (3%)
Query: 20 KGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPP 79
+GD++++ + DAIV+ NE +L GG AIH AAGP L +AC Q+PE + VRCP
Sbjct: 20 RGDLTKF----AGDAIVNAANERMLGGGGVDGAIHRAAGPSLLEACRQVPEVRQGVRCPT 75
Query: 80 GEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISC 139
GEAR+T G LP +VIHTVGPV++ +L SAY++ L + + ++ +AFPAISC
Sbjct: 76 GEARMTTGAGLPARNVIHTVGPVYHNAEASAPLLESAYRSSLQLANQHGLKTVAFPAISC 135
Query: 140 GV 141
G+
Sbjct: 136 GI 137
>gi|452821007|gb|EME28042.1| hypothetical protein Gasu_43830 [Galdieria sulphuraria]
Length = 187
Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 81/126 (64%), Gaps = 4/126 (3%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ I +GDI++ VD AIV+ NE L +GG AIH AAGP +AC ++P+ + +
Sbjct: 14 ITIKRGDITKEQVD----AIVNAANEQLTVGGGVCGAIHRAAGPAYTEACLKVPQVRQGI 69
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFP 135
CP GEARI G LP S VI+TVGPV++ NP ++L S Y++ L V N ++ +AFP
Sbjct: 70 LCPTGEARIVTGGLLPASFVINTVGPVYSSVPNPAELLESCYRSVLQVANENGLRSVAFP 129
Query: 136 AISCGV 141
AISCG+
Sbjct: 130 AISCGI 135
>gi|260777249|ref|ZP_05886143.1| hypothetical protein VIC_002643 [Vibrio coralliilyticus ATCC
BAA-450]
gi|260606915|gb|EEX33189.1| hypothetical protein VIC_002643 [Vibrio coralliilyticus ATCC
BAA-450]
Length = 173
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 77/122 (63%), Gaps = 5/122 (4%)
Query: 20 KGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPP 79
GDI+R VD AIV+ N +L GG AIH AAG +L KAC Q+ EA VRCP
Sbjct: 6 NGDITRAQVD----AIVNAANPKMLGGGGVDGAIHRAAGSELLKACQQV-EAVDGVRCPS 60
Query: 80 GEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISC 139
G+ARIT KL +VIHTVGP+++ NPE IL+SAY+ L + + IAFPAISC
Sbjct: 61 GQARITTSGKLRAKYVIHTVGPIYHQVANPEQILQSAYRESLKLALTHRCLSIAFPAISC 120
Query: 140 GV 141
GV
Sbjct: 121 GV 122
>gi|159485074|ref|XP_001700574.1| predicted protein [Chlamydomonas reinhardtii]
gi|158272214|gb|EDO98018.1| predicted protein [Chlamydomonas reinhardtii]
Length = 144
Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/133 (47%), Positives = 78/133 (58%), Gaps = 11/133 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSP-------TNEILLLGGFTAAAIHEAAGPDLQKACYQI 68
L I GDI++ VD AIV+ +NE +L GG AIH+ AGP L +AC +
Sbjct: 3 LVIKSGDITQEDVD----AIVNAGRCQGCYSNERMLGGGGVDGAIHKTAGPQLLEACRAV 58
Query: 69 PEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANN 128
PE +P VRCP GEARITPGFKL HVIHTVGPV+ +L +A N L +
Sbjct: 59 PEVEPDVRCPTGEARITPGFKLKARHVIHTVGPVYRSDGVSAPLLAAAVSNSLRLAAEKG 118
Query: 129 IQYIAFPAISCGV 141
+ I+FPAIS GV
Sbjct: 119 VTSISFPAISTGV 131
>gi|408822041|ref|ZP_11206931.1| RNase III inhibitor [Pseudomonas geniculata N1]
Length = 199
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 78/127 (61%), Gaps = 5/127 (3%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ +GDI+ VD AIV+ NE LL GG AIH AAGP L C Q+PE +P V
Sbjct: 3 IEVWQGDITTLAVD----AIVNAANETLLGGGGVDGAIHRAAGPALLAECEQLPELRPGV 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
RCP GE R T + LP HV+HTVGPV++ E +L + Y L + ++ +Q IAF
Sbjct: 59 RCPTGEVRATDAYALPAQHVLHTVGPVWHDGQRDEPALLANCYWKSLQLAESLGVQSIAF 118
Query: 135 PAISCGV 141
PAISCGV
Sbjct: 119 PAISCGV 125
>gi|302782153|ref|XP_002972850.1| hypothetical protein SELMODRAFT_98248 [Selaginella moellendorffii]
gi|300159451|gb|EFJ26071.1| hypothetical protein SELMODRAFT_98248 [Selaginella moellendorffii]
Length = 208
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 84/142 (59%), Gaps = 7/142 (4%)
Query: 1 MTFKVQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPD 60
M FK+ S S+ I GDIS+W VD +DAIV+P N+ L G IH+AAGP
Sbjct: 1 MKFKL-----SDACSMTIYYGDISKWNVDGLNDAIVAPANKRLNAGAAVDGVIHKAAGPR 55
Query: 61 LQKACYQIPEAQPR-VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKN 119
L AC ++P+ P ++C GEA T + L VS VIHTVGPVF + +L YK+
Sbjct: 56 LLSACQKLPDVAPLGIKCNVGEAVSTRAYNLLVSRVIHTVGPVFEGK-ESDPVLEQTYKS 114
Query: 120 CLSVGKANNIQYIAFPAISCGV 141
L++G NI++I FPA+SC +
Sbjct: 115 ALALGLKENIKFICFPALSCRI 136
>gi|302805342|ref|XP_002984422.1| hypothetical protein SELMODRAFT_120118 [Selaginella moellendorffii]
gi|300147810|gb|EFJ14472.1| hypothetical protein SELMODRAFT_120118 [Selaginella moellendorffii]
Length = 208
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 84/142 (59%), Gaps = 7/142 (4%)
Query: 1 MTFKVQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPD 60
M FK+ S S+ I GDIS+W VD +DAIV+P N+ L G IH+AAGP
Sbjct: 1 MKFKL-----SDACSMTIYYGDISKWNVDGLNDAIVAPANKRLNAGAAVDGVIHKAAGPR 55
Query: 61 LQKACYQIPEAQPR-VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKN 119
L AC ++P+ P ++C GEA T + L VS VIHTVGPVF + +L YK+
Sbjct: 56 LLSACQKLPDVAPLGIKCNVGEAVSTRAYNLLVSRVIHTVGPVFEGK-ESDPVLEQTYKS 114
Query: 120 CLSVGKANNIQYIAFPAISCGV 141
L++G NI++I FPA+SC +
Sbjct: 115 ALALGLKENIKFICFPALSCRI 136
>gi|254525015|ref|ZP_05137070.1| conserved hypothetical protein [Stenotrophomonas sp. SKA14]
gi|219722606|gb|EED41131.1| conserved hypothetical protein [Stenotrophomonas sp. SKA14]
Length = 199
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 78/127 (61%), Gaps = 5/127 (3%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ +GDI+ VD AIV+ NE LL GG AIH AAGP L C Q+PE +P V
Sbjct: 3 IEVWQGDITTLAVD----AIVNAANETLLGGGGVDGAIHRAAGPALLAECEQLPELRPGV 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
RCP GE R T + LP HV+HTVGPV++ E +L + Y L + ++ +Q IAF
Sbjct: 59 RCPTGEVRATGAYALPARHVLHTVGPVWHDGQRDEPALLANCYWKSLQLAESLGVQSIAF 118
Query: 135 PAISCGV 141
PAISCGV
Sbjct: 119 PAISCGV 125
>gi|384252331|gb|EIE25807.1| A1pp-domain-containing protein, partial [Coccomyxa subellipsoidea
C-169]
Length = 159
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 73/102 (71%), Gaps = 3/102 (2%)
Query: 43 LLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR-VRCPPGEARITPGFKLPVSHVIHTVGP 101
LL GG AIH AAGP+L +AC ++P Q R VRCP GEA ITPGFKLP +VIHTVGP
Sbjct: 6 LLGGGGVDGAIHAAAGPELLEACRRLPIVQGRSVRCPTGEAHITPGFKLPAKNVIHTVGP 65
Query: 102 VFNFHCNPE--DILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
+++ H E +L +A++N L + + ++I+ IAFPAISCGV
Sbjct: 66 IYSRHTTEEAARLLTNAHRNSLRLAQEHDIKTIAFPAISCGV 107
>gi|389776348|ref|ZP_10193871.1| RNase III inhibitor [Rhodanobacter spathiphylli B39]
gi|388436735|gb|EIL93583.1| RNase III inhibitor [Rhodanobacter spathiphylli B39]
Length = 176
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/121 (52%), Positives = 79/121 (65%), Gaps = 5/121 (4%)
Query: 22 DISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGE 81
DI+R VD AIV+ N LL GG AIH AAGP L AC +PE+ P VRCP GE
Sbjct: 13 DITRLDVD----AIVNAANPGLLGGGGVDGAIHRAAGPGLLAACRALPESAPGVRCPTGE 68
Query: 82 ARITPGFKLPVSHVIHTVGPVFN-FHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCG 140
ARITPGF LP HVIHTVGPV++ H + +L ++N L + + +++ IAFPAISCG
Sbjct: 69 ARITPGFALPARHVIHTVGPVWHGGHHDEARLLGQCHRNALRLLRGQSLRTIAFPAISCG 128
Query: 141 V 141
V
Sbjct: 129 V 129
>gi|376297945|ref|YP_005169175.1| Appr-1-p processing protein [Desulfovibrio desulfuricans ND132]
gi|323460507|gb|EGB16372.1| Appr-1-p processing domain protein [Desulfovibrio desulfuricans
ND132]
Length = 182
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/128 (48%), Positives = 81/128 (63%), Gaps = 8/128 (6%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPD-LQKACYQIPEAQPR 74
L + +GDI+R VD A+V+ N L GG AIH AAG D LQ AC +I
Sbjct: 12 LSVREGDITRLTVD----AVVNAANSRLAGGGGVDGAIHRAAGIDRLQAACREIIREIGS 67
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIA 133
+ PPGEA ITPGF LP H+IHTVGP++ N E ++L +AY+N L++ ++IQ +A
Sbjct: 68 L--PPGEAVITPGFGLPARHIIHTVGPIWRGGANSEPELLGNAYRNSLALAHRHDIQTLA 125
Query: 134 FPAISCGV 141
FPAISCGV
Sbjct: 126 FPAISCGV 133
>gi|386719754|ref|YP_006186080.1| Macro domain, possibly ADP-ribose binding module [Stenotrophomonas
maltophilia D457]
gi|384079316|emb|CCH13914.1| Macro domain, possibly ADP-ribose binding module [Stenotrophomonas
maltophilia D457]
Length = 199
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 77/127 (60%), Gaps = 5/127 (3%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ +GDI+ VD AIV+ NE LL GG AIH AAGP L C Q+PE +P V
Sbjct: 3 IEVWQGDITTLAVD----AIVNAANETLLGGGGVDGAIHRAAGPALLAECAQLPELRPGV 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
RCP GE R T LP HV+HTVGPV++ E +L + Y L + ++ +Q IAF
Sbjct: 59 RCPTGEVRATSAHALPARHVLHTVGPVWHDGQRDEPALLANCYWKSLQLAESLGVQSIAF 118
Query: 135 PAISCGV 141
PAISCGV
Sbjct: 119 PAISCGV 125
>gi|344208642|ref|YP_004793783.1| Appr-1-p processing protein [Stenotrophomonas maltophilia JV3]
gi|343780004|gb|AEM52557.1| Appr-1-p processing domain protein [Stenotrophomonas maltophilia
JV3]
Length = 199
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 77/127 (60%), Gaps = 5/127 (3%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ +GDI+ VD AIV+ NE LL GG AIH AAGP L C Q+PE +P V
Sbjct: 3 IEVWQGDITTLAVD----AIVNAANETLLGGGGVDGAIHRAAGPALLAECEQLPELRPGV 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
RCP GE R T LP HV+HTVGPV++ E +L + Y L + ++ +Q IAF
Sbjct: 59 RCPTGEVRATAAHALPARHVLHTVGPVWHDGQRDEPALLANCYWKSLQLAESLGVQSIAF 118
Query: 135 PAISCGV 141
PAISCGV
Sbjct: 119 PAISCGV 125
>gi|302851823|ref|XP_002957434.1| hypothetical protein VOLCADRAFT_107691 [Volvox carteri f.
nagariensis]
gi|300257238|gb|EFJ41489.1| hypothetical protein VOLCADRAFT_107691 [Volvox carteri f.
nagariensis]
Length = 1866
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 51/102 (50%), Positives = 68/102 (66%)
Query: 40 NEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTV 99
NE +L GG AIH AAGP+L +AC ++PE +P VRCP GEARITPGFKL HVIHTV
Sbjct: 1693 NERMLGGGGVDGAIHRAAGPELVRACAEVPEVRPGVRCPTGEARITPGFKLKARHVIHTV 1752
Query: 100 GPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
GP++ + +L AY++ L + ++ ++FP IS GV
Sbjct: 1753 GPIYENPKHSAPLLAGAYRSSLQLALERGLKSVSFPGISTGV 1794
>gi|424669958|ref|ZP_18106983.1| UPF0189 protein [Stenotrophomonas maltophilia Ab55555]
gi|401071034|gb|EJP79547.1| UPF0189 protein [Stenotrophomonas maltophilia Ab55555]
Length = 199
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 78/127 (61%), Gaps = 5/127 (3%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ +GDI+ VD AIV+ NE LL GG AIH AAGP L C Q+PE +P V
Sbjct: 3 IEVWQGDITTLAVD----AIVNAANETLLGGGGVDGAIHRAAGPALLAECEQLPELRPGV 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
RCP GE R T + LP +V+HTVGPV++ E +L + Y L + ++ +Q IAF
Sbjct: 59 RCPTGEVRATSAYALPARYVLHTVGPVWHDGQRDEPALLANCYWKSLQLAESLGVQSIAF 118
Query: 135 PAISCGV 141
PAISCGV
Sbjct: 119 PAISCGV 125
>gi|456734622|gb|EMF59392.1| Macro domain, possibly ADP-ribose binding module [Stenotrophomonas
maltophilia EPM1]
Length = 199
Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 78/127 (61%), Gaps = 5/127 (3%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ +GDI+ VD AIV+ NE LL GG AIH AAGP L C Q+PE +P V
Sbjct: 3 IEVWQGDITTLAVD----AIVNAANETLLGGGGVDGAIHRAAGPALLGECAQLPELRPGV 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
RCP GE R T + LP +V+HTVGPV++ E +L + Y L + ++ +Q IAF
Sbjct: 59 RCPTGEVRATSAYALPARYVLHTVGPVWHDGQRDEPALLANCYWKSLQLAESLGVQSIAF 118
Query: 135 PAISCGV 141
PAISCGV
Sbjct: 119 PAISCGV 125
>gi|433284452|emb|CCO06654.1| Putative O-acetyl-ADP-ribose deacetylase [Candidatus Desulfamplus
magnetomortis BW-1]
Length = 174
Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 82/128 (64%), Gaps = 5/128 (3%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
++++I KGDI+ VD AIV+ N ++L GG AIH AAGP L + C +I +
Sbjct: 2 SNIQIIKGDITTADVD----AIVNAANPVMLGGGGVDGAIHRAAGPLLLRECEKIKPVK- 56
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
+RCP GEARITP L +VIHTVGP++ NPE L+++Y N L++ +N + IA
Sbjct: 57 GIRCPVGEARITPAGNLKSKYVIHTVGPIYVSDENPEKHLQASYLNSLNLALSNKCESIA 116
Query: 134 FPAISCGV 141
FPAISCGV
Sbjct: 117 FPAISCGV 124
>gi|188990388|ref|YP_001902398.1| hypothetical protein xccb100_0992 [Xanthomonas campestris pv.
campestris str. B100]
gi|384429144|ref|YP_005638504.1| appr-1-p processing protein [Xanthomonas campestris pv. raphani
756C]
gi|167732148|emb|CAP50340.1| putative ADP-ribose binding protein [Xanthomonas campestris pv.
campestris]
gi|341938247|gb|AEL08386.1| appr-1-p processing protein [Xanthomonas campestris pv. raphani
756C]
Length = 179
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 77/128 (60%), Gaps = 7/128 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ +GDI++ VD IV+ NE LL GG AIH AAGP L +AC +PE +P V
Sbjct: 3 IEVWQGDITQLDVD----VIVNAANESLLGGGGVDGAIHRAAGPRLLEACEALPEVRPGV 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF--NFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
RCP GE RIT GF L H+ HTVGPV+ H PE L + Y L + + + IA
Sbjct: 59 RCPTGEIRITDGFDLKARHIFHTVGPVWRDGKHNEPEQ-LANCYWQSLKLAEQMMLHSIA 117
Query: 134 FPAISCGV 141
FPAISCG+
Sbjct: 118 FPAISCGI 125
>gi|148262690|ref|YP_001229396.1| appr-1-p processing domain-containing protein [Geobacter
uraniireducens Rf4]
gi|146396190|gb|ABQ24823.1| Appr-1-p processing domain protein [Geobacter uraniireducens Rf4]
Length = 172
Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 78/130 (60%), Gaps = 11/130 (8%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K ++I +GDI+R VD AIV+ N LL GG AIH AAGPDL C +
Sbjct: 2 KGKIEIIQGDITRLAVD----AIVNAANNTLLGGGGVDGAIHRAAGPDLVAECSTLG--- 54
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
C G+A+IT G+KLP HVIHTVGPV++ E ++LR AY+ C V A+ ++
Sbjct: 55 ---GCETGDAKITKGYKLPAKHVIHTVGPVWHGGSKGEPELLRKAYRRCFEVAHASKLKS 111
Query: 132 IAFPAISCGV 141
IAFPAIS GV
Sbjct: 112 IAFPAISAGV 121
>gi|21232613|ref|NP_638530.1| hypothetical protein XCC3184 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66767312|ref|YP_242074.1| hypothetical protein XC_0980 [Xanthomonas campestris pv. campestris
str. 8004]
gi|25453352|sp|Q8P5Z8.1|Y3184_XANCP RecName: Full=Macro domain-containing protein XCC3184
gi|21114415|gb|AAM42454.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66572644|gb|AAY48054.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
Length = 179
Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 77/128 (60%), Gaps = 7/128 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ +GDI++ VD IV+ NE LL GG AIH AAGP L +AC +PE +P V
Sbjct: 3 IEVWQGDITQLDVD----VIVNAANESLLGGGGVDGAIHRAAGPRLLEACEALPEVRPGV 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF--NFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
RCP GE RIT GF L H+ HTVGPV+ H PE L + Y L + + + IA
Sbjct: 59 RCPTGEIRITDGFDLKARHIFHTVGPVWRDGKHNEPEQ-LANCYWQSLKLAEQMMLHSIA 117
Query: 134 FPAISCGV 141
FPAISCG+
Sbjct: 118 FPAISCGI 125
>gi|339998984|ref|YP_004729867.1| hypothetical protein SBG_0984 [Salmonella bongori NCTC 12419]
gi|339512345|emb|CCC30081.1| conserved hypothetical protein [Salmonella bongori NCTC 12419]
Length = 180
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 80/130 (61%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K+ L++ +GDI+R VD AIV+ N L+ GG AIH AAGP L AC +I + Q
Sbjct: 3 KSRLQVIQGDITRLGVD----AIVNAANASLMGGGGVDGAIHRAAGPSLLDACKKIRQQQ 58
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
CP G+A ITP KL VIHTVGPV+ + E ++L AY+NCL + +AN +
Sbjct: 59 GE--CPTGQAVITPAGKLSAKAVIHTVGPVWRGGEHQEAELLEEAYRNCLRLAEANGYRS 116
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 117 VAFPAISTGV 126
>gi|389794039|ref|ZP_10197199.1| RNase III inhibitor [Rhodanobacter fulvus Jip2]
gi|388433070|gb|EIL90048.1| RNase III inhibitor [Rhodanobacter fulvus Jip2]
Length = 173
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 77/122 (63%), Gaps = 7/122 (5%)
Query: 22 DISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGE 81
DI+R VD AIV+ N LL GG AIH AAGP L AC +PE P VRCP GE
Sbjct: 9 DITRLSVD----AIVNAANPDLLGGGGVDGAIHRAAGPQLLAACRALPETAPGVRCPTGE 64
Query: 82 ARITPGFKLPVSHVIHTVGPVFNF--HCNPEDILRSAYKNCLSVGKANNIQYIAFPAISC 139
ARITPGF LP HVIHTVGPV++ H P +L Y + L + + + ++ IAFPAISC
Sbjct: 65 ARITPGFDLPARHVIHTVGPVWHGGQHGEPA-LLADCYHHALQLLREHRLRTIAFPAISC 123
Query: 140 GV 141
GV
Sbjct: 124 GV 125
>gi|451946276|ref|YP_007466871.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Desulfocapsa sulfexigens DSM 10523]
gi|451905624|gb|AGF77218.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Desulfocapsa sulfexigens DSM 10523]
Length = 166
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/127 (49%), Positives = 79/127 (62%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++I +GDI+ VD AIV+ N LL GG AIH AAGP+L K C +I
Sbjct: 4 VEIIRGDITTLEVD----AIVNAANNSLLGGGGVDGAIHLAAGPELLKECEKIG------ 53
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAF 134
CP GEARIT G+ LP ++IHTVGPV+ E +L S Y+NCL + K+NN+ IAF
Sbjct: 54 GCPTGEARITKGYNLPAHYIIHTVGPVWQGGGYGESALLASCYQNCLHLAKSNNLSSIAF 113
Query: 135 PAISCGV 141
PAISCGV
Sbjct: 114 PAISCGV 120
>gi|289665086|ref|ZP_06486667.1| hypothetical protein XcampvN_18960 [Xanthomonas campestris pv.
vasculorum NCPPB 702]
Length = 179
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 76/128 (59%), Gaps = 7/128 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ +GDI+ VD IV+ NE LL GG AIH AAGP L +AC +P+ +P V
Sbjct: 3 IEVWQGDITELDVD----VIVNAANESLLGGGGVDGAIHRAAGPHLLEACEALPQVRPGV 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF--NFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
RCP GE RIT GF L HV HTVGPV+ H PE L + Y L + + + IA
Sbjct: 59 RCPTGEIRITDGFNLKARHVFHTVGPVWRDGKHNEPEQ-LANCYWQSLKLAEQMMLHSIA 117
Query: 134 FPAISCGV 141
FPAISCG+
Sbjct: 118 FPAISCGI 125
>gi|325914302|ref|ZP_08176652.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Xanthomonas vesicatoria ATCC 35937]
gi|325539557|gb|EGD11203.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Xanthomonas vesicatoria ATCC 35937]
Length = 179
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 76/128 (59%), Gaps = 7/128 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ +GDI+ VD IV+ NE LL GG AIH AAGP L +AC +P+ +P V
Sbjct: 3 IEVWQGDITELDVD----VIVNAANESLLGGGGVDGAIHRAAGPRLLQACEALPQVRPGV 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF--NFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
RCP GE RIT GF L HV HTVGPV+ H PE L + Y L + + + IA
Sbjct: 59 RCPTGEIRITDGFDLKARHVFHTVGPVWRDGKHNEPEQ-LANCYWQSLKLAEQMMLHSIA 117
Query: 134 FPAISCGV 141
FPAISCG+
Sbjct: 118 FPAISCGI 125
>gi|78049017|ref|YP_365192.1| hypothetical protein XCV3461 [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325927230|ref|ZP_08188489.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Xanthomonas perforans 91-118]
gi|346726108|ref|YP_004852777.1| hypothetical protein XACM_3232 [Xanthomonas axonopodis pv.
citrumelo F1]
gi|78037447|emb|CAJ25192.1| conserved hypothetical protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325542397|gb|EGD13880.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Xanthomonas perforans 91-118]
gi|346650855|gb|AEO43479.1| hypothetical protein XACM_3232 [Xanthomonas axonopodis pv.
citrumelo F1]
Length = 179
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 76/128 (59%), Gaps = 7/128 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ +GDI+ VD IV+ NE LL GG AIH AAGP L +AC +P+ +P V
Sbjct: 3 IEVWQGDITELDVD----VIVNAANESLLGGGGVDGAIHRAAGPRLLEACEALPQVRPGV 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF--NFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
RCP GE RIT GF L HV HTVGPV+ H PE L + Y L + + + IA
Sbjct: 59 RCPTGEIRITDGFNLKARHVFHTVGPVWRDGKHNEPEQ-LANCYWQSLKLAEQMMLHSIA 117
Query: 134 FPAISCGV 141
FPAISCG+
Sbjct: 118 FPAISCGI 125
>gi|380510974|ref|ZP_09854381.1| RNase III inhibitor [Xanthomonas sacchari NCPPB 4393]
Length = 180
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 79/128 (61%), Gaps = 5/128 (3%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
++I +GDI++ VD AIV+ NE LL GG AIH AAGP+L + C ++PE +P
Sbjct: 2 KIEIWQGDITQLDVD----AIVNAANESLLGGGGVDGAIHRAAGPELLEECRRLPELKPG 57
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIA 133
VRCP GE R T G +L HV+HTVGPV+ + E +L + Y L + + + +A
Sbjct: 58 VRCPVGEVRATAGHRLKARHVLHTVGPVWRDGAHNEPALLANCYWRTLRLAEQMGLHSVA 117
Query: 134 FPAISCGV 141
FPAISCGV
Sbjct: 118 FPAISCGV 125
>gi|289668539|ref|ZP_06489614.1| hypothetical protein XcampmN_08590 [Xanthomonas campestris pv.
musacearum NCPPB 4381]
Length = 179
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 76/128 (59%), Gaps = 7/128 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ +GDI+ VD IV+ NE LL GG AIH AAGP L +AC +P+ +P V
Sbjct: 3 IEVWQGDITELDVD----VIVNAANESLLGGGGVDGAIHRAAGPRLLEACEALPQVRPGV 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF--NFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
RCP GE RIT GF L HV HTVGPV+ H PE L + Y L + + + IA
Sbjct: 59 RCPTGEIRITDGFNLKARHVFHTVGPVWRDGKHNEPEQ-LANCYWQSLKLAEQMMLHSIA 117
Query: 134 FPAISCGV 141
FPAISCG+
Sbjct: 118 FPAISCGI 125
>gi|294667052|ref|ZP_06732278.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292603144|gb|EFF46569.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 204
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 77/128 (60%), Gaps = 7/128 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ +GDI++ VD IV+ NE LL GG AIH AAGP L +AC +P+ +P V
Sbjct: 28 IEVWQGDITQLDVD----VIVNAANESLLGGGGVDGAIHRAAGPRLLEACEALPQVRPGV 83
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFN--FHCNPEDILRSAYKNCLSVGKANNIQYIA 133
RCP GE RIT GF L H+ HTVGPV+ H PE L + Y L + + + IA
Sbjct: 84 RCPTGEIRITDGFDLKARHIFHTVGPVWRDGRHNEPEQ-LANCYWQSLKLAEQMMLHSIA 142
Query: 134 FPAISCGV 141
FPAISCG+
Sbjct: 143 FPAISCGI 150
>gi|390991871|ref|ZP_10262124.1| YmdB protein [Xanthomonas axonopodis pv. punicae str. LMG 859]
gi|25453353|sp|Q8PHB6.2|Y3343_XANAC RecName: Full=Macro domain-containing protein XAC3343
gi|372553404|emb|CCF69099.1| YmdB protein [Xanthomonas axonopodis pv. punicae str. LMG 859]
Length = 179
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 76/128 (59%), Gaps = 7/128 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ +GDI+ VD IV+ NE LL GG AIH AAGP L +AC +P+ +P V
Sbjct: 3 IEVWQGDITELDVD----VIVNAANESLLGGGGVDGAIHRAAGPRLLEACEALPQVRPGV 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF--NFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
RCP GE RIT GF L H+ HTVGPV+ H PE L + Y L + + + IA
Sbjct: 59 RCPTGEIRITDGFDLKARHIFHTVGPVWRDGRHNEPEQ-LANCYWQSLKLAEQMMLHSIA 117
Query: 134 FPAISCGV 141
FPAISCG+
Sbjct: 118 FPAISCGI 125
>gi|418517510|ref|ZP_13083672.1| RNase III inhibitor [Xanthomonas axonopodis pv. malvacearum str.
GSPB1386]
gi|410705750|gb|EKQ64218.1| RNase III inhibitor [Xanthomonas axonopodis pv. malvacearum str.
GSPB1386]
Length = 179
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 76/128 (59%), Gaps = 7/128 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ +GDI+ VD IV+ NE LL GG AIH AAGP L +AC +P+ +P V
Sbjct: 3 IEVWQGDITELDVD----VIVNAANESLLGGGGVDGAIHRAAGPRLLEACEALPQVRPGV 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF--NFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
RCP GE RIT GF L H+ HTVGPV+ H PE L + Y L + + + IA
Sbjct: 59 RCPTGEIRITDGFDLKARHIFHTVGPVWRDGRHNEPEQ-LANCYWQSLKLAEQMMLHSIA 117
Query: 134 FPAISCGV 141
FPAISCG+
Sbjct: 118 FPAISCGI 125
>gi|381172054|ref|ZP_09881190.1| YmdB protein [Xanthomonas citri pv. mangiferaeindicae LMG 941]
gi|380687526|emb|CCG37677.1| YmdB protein [Xanthomonas citri pv. mangiferaeindicae LMG 941]
Length = 179
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 76/128 (59%), Gaps = 7/128 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ +GDI+ VD IV+ NE LL GG AIH AAGP L +AC +P+ +P V
Sbjct: 3 IEVWQGDITELDVD----VIVNAANESLLGGGGVDGAIHRAAGPRLLEACEALPQVRPGV 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF--NFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
RCP GE RIT GF L H+ HTVGPV+ H PE L + Y L + + + IA
Sbjct: 59 RCPTGEIRITDGFDLKARHIFHTVGPVWRDGRHNEPEQ-LANCYWQSLKLAEQMMLHSIA 117
Query: 134 FPAISCGV 141
FPAISCG+
Sbjct: 118 FPAISCGI 125
>gi|384420484|ref|YP_005629844.1| hypothetical protein XOC_3584 [Xanthomonas oryzae pv. oryzicola
BLS256]
gi|353463397|gb|AEQ97676.1| hypothetical protein XOC_3584 [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 179
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 74/128 (57%), Gaps = 7/128 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+K+ +GDI+ VD IV+ NE LL GG AIH AAGP L AC +P +P V
Sbjct: 3 IKVWQGDITELDVD----VIVNAANESLLGGGGVDGAIHRAAGPRLLDACEALPHVRPGV 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF--NFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
RCP GE RIT GF L HV HTVGPV+ H PE L + Y L + + + IA
Sbjct: 59 RCPTGEIRITDGFNLKARHVFHTVGPVWRDGKHNEPEQ-LANCYWQSLKLAEQMLLHSIA 117
Query: 134 FPAISCGV 141
FPAISCG+
Sbjct: 118 FPAISCGI 125
>gi|194366983|ref|YP_002029593.1| hypothetical protein Smal_3211 [Stenotrophomonas maltophilia
R551-3]
gi|194349787|gb|ACF52910.1| Appr-1-p processing domain protein [Stenotrophomonas maltophilia
R551-3]
Length = 199
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 76/127 (59%), Gaps = 5/127 (3%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ +GDI+ VD AIV+ NE LL GG AIH AAGP L C Q+PE +P V
Sbjct: 3 IEVWQGDITTLAVD----AIVNAANETLLGGGGVDGAIHRAAGPALLAECEQLPELRPGV 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
RCP GE R T LP HV+HTVGPV++ E +L + Y L + ++ + IAF
Sbjct: 59 RCPTGEVRATDAHALPARHVLHTVGPVWHDGQRDEPALLANCYWKSLQLAESLGVTSIAF 118
Query: 135 PAISCGV 141
PAISCGV
Sbjct: 119 PAISCGV 125
>gi|343512301|ref|ZP_08749436.1| hypothetical protein VIS19158_22963 [Vibrio scophthalmi LMG 19158]
gi|342795704|gb|EGU31415.1| hypothetical protein VIS19158_22963 [Vibrio scophthalmi LMG 19158]
Length = 170
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 79/127 (62%), Gaps = 5/127 (3%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
S+ + GDI+ VD AIV+ N +L GG AIH AAGP+L +AC+ +P+++
Sbjct: 3 SITLIHGDITTANVD----AIVNAANTKMLGGGGVDGAIHRAAGPELLRACFALPQSKGS 58
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
RCP G+ARIT L VIH VGP+++ +P+ +L SAYK L + ANN + +A
Sbjct: 59 -RCPYGDARITIAGSLKARFVIHAVGPIYSKFSDPKAVLTSAYKQALDLALANNCKTVAL 117
Query: 135 PAISCGV 141
PAISCGV
Sbjct: 118 PAISCGV 124
>gi|418522414|ref|ZP_13088450.1| RNase III inhibitor [Xanthomonas axonopodis pv. malvacearum str.
GSPB2388]
gi|410701296|gb|EKQ59823.1| RNase III inhibitor [Xanthomonas axonopodis pv. malvacearum str.
GSPB2388]
Length = 179
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 76/128 (59%), Gaps = 7/128 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ +GDI+ VD IV+ NE LL GG AIH AAGP L +AC +P+ +P V
Sbjct: 3 IEVWQGDITELDVD----VIVNAANESLLGGGGVDGAIHRAAGPRLLEACEALPQVRPGV 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF--NFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
RCP GE RIT GF L H+ HTVGPV+ H PE L + Y L + + + IA
Sbjct: 59 RCPTGEIRITDGFDLKARHIFHTVGPVWRDGRHNEPEQ-LANCYWQSLKLAEQMMLHSIA 117
Query: 134 FPAISCGV 141
FPAISCG+
Sbjct: 118 FPAISCGI 125
>gi|389805891|ref|ZP_10203036.1| RNase III inhibitor [Rhodanobacter thiooxydans LCS2]
gi|388446608|gb|EIM02633.1| RNase III inhibitor [Rhodanobacter thiooxydans LCS2]
Length = 173
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/127 (50%), Positives = 80/127 (62%), Gaps = 5/127 (3%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++I DI+R VD AIV+ N LL GG AIH AAGP L +AC +PE P V
Sbjct: 3 IQIIHADITRLTVD----AIVNAANPGLLGGGGVDGAIHRAAGPALLQACRALPEIAPGV 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
RCP GEARITPGF LP VIHTVGPV+ + E ++L ++N L + + ++ IAF
Sbjct: 59 RCPTGEARITPGFALPAPWVIHTVGPVWRGGDDGEAELLARCHRNALRLLRGQQLRTIAF 118
Query: 135 PAISCGV 141
PAISCGV
Sbjct: 119 PAISCGV 125
>gi|21244068|ref|NP_643650.1| hypothetical protein XAC3343 [Xanthomonas axonopodis pv. citri str.
306]
gi|21109691|gb|AAM38186.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 195
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 76/128 (59%), Gaps = 7/128 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ +GDI+ VD IV+ NE LL GG AIH AAGP L +AC +P+ +P V
Sbjct: 19 IEVWQGDITELDVD----VIVNAANESLLGGGGVDGAIHRAAGPRLLEACEALPQVRPGV 74
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFN--FHCNPEDILRSAYKNCLSVGKANNIQYIA 133
RCP GE RIT GF L H+ HTVGPV+ H PE L + Y L + + + IA
Sbjct: 75 RCPTGEIRITDGFDLKARHIFHTVGPVWRDGRHNEPEQ-LANCYWQSLKLAEQMMLHSIA 133
Query: 134 FPAISCGV 141
FPAISCG+
Sbjct: 134 FPAISCGI 141
>gi|295695643|ref|YP_003588881.1| Appr-1-p processing protein [Kyrpidia tusciae DSM 2912]
gi|295411245|gb|ADG05737.1| Appr-1-p processing domain protein [Kyrpidia tusciae DSM 2912]
Length = 182
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 80/127 (62%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ +GDI++ VD AIV+ N LL GG AIH AAGP+L + C +
Sbjct: 11 IRLHQGDITKLDVD----AIVNAANSTLLGGGGVDGAIHRAAGPELLEECRTLKG----- 61
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
CP G+A+IT G++LP +HVIHTVGP++ E ++LRS Y N LS+ A+ ++ IAF
Sbjct: 62 -CPTGQAKITKGYRLPAAHVIHTVGPIWRGGSAGEAELLRSCYVNSLSLADAHGLKSIAF 120
Query: 135 PAISCGV 141
PAIS GV
Sbjct: 121 PAISTGV 127
>gi|294625384|ref|ZP_06704017.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292600302|gb|EFF44406.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 150
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 76/128 (59%), Gaps = 7/128 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ +GDI+ VD IV+ NE LL GG AIH AAGP L +AC +P+ +P V
Sbjct: 28 IEVWQGDITELDVD----VIVNAANESLLGGGGVDGAIHRAAGPRLLEACEALPQVRPGV 83
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF--NFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
RCP GE RIT GF L H+ HTVGPV+ H PE L + Y L + + + IA
Sbjct: 84 RCPTGEIRITDGFDLKARHIFHTVGPVWRDGRHNEPEQ-LANCYWQSLKLAEQMMLHSIA 142
Query: 134 FPAISCGV 141
FPAISCG+
Sbjct: 143 FPAISCGI 150
>gi|222054495|ref|YP_002536857.1| Appr-1-p processing protein [Geobacter daltonii FRC-32]
gi|221563784|gb|ACM19756.1| Appr-1-p processing domain protein [Geobacter daltonii FRC-32]
Length = 171
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 78/129 (60%), Gaps = 11/129 (8%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
++I +GDI+ VD AI++ N LL GG AIH AAGP+L C +
Sbjct: 2 AKIEIIRGDITTLAVD----AIINAANNTLLGGGGVDGAIHRAAGPELVAECSTLGG--- 54
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
C G+A+IT G+KLP +HVIHTVGPV++ E ++LR AY+ C V AN ++++
Sbjct: 55 ---CETGDAKITKGYKLPAAHVIHTVGPVWHGGDKGEPELLRRAYRRCFEVAHANQLKFL 111
Query: 133 AFPAISCGV 141
AFPAIS GV
Sbjct: 112 AFPAISAGV 120
>gi|188577862|ref|YP_001914791.1| hypothetical protein PXO_02120 [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|188522314|gb|ACD60259.1| appr-1-p processing [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 179
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 74/128 (57%), Gaps = 7/128 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ +GDI+ VD IV+ NE LL GG AIH AAGP L AC +P +P V
Sbjct: 3 IEVWQGDITELDVD----VIVNAANESLLGGGGVDGAIHRAAGPRLLDACEALPHMRPGV 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF--NFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
RCP GE RIT GF L HV HTVGPV+ H PE L + Y L + + + IA
Sbjct: 59 RCPTGEIRITDGFNLKARHVFHTVGPVWRDGKHNEPEQ-LANCYWQSLKLAEQMLLHSIA 117
Query: 134 FPAISCGV 141
FPAISCG+
Sbjct: 118 FPAISCGI 125
>gi|424790312|ref|ZP_18216867.1| putative ADP-ribose binding protein [Xanthomonas translucens pv.
graminis ART-Xtg29]
gi|422798095|gb|EKU26253.1| putative ADP-ribose binding protein [Xanthomonas translucens pv.
graminis ART-Xtg29]
Length = 222
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 77/127 (60%), Gaps = 5/127 (3%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++I +GDI+ VD AIV+ NE LL GG AIH AAGP L + C ++PE +P V
Sbjct: 40 IEIWQGDITELDVD----AIVNAANESLLGGGGVDGAIHRAAGPQLLEECLRLPELKPGV 95
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAF 134
RC GE R T G++L HV+HTVGPV+ + E +L + Y L V + + +AF
Sbjct: 96 RCAVGEVRATAGYRLKAPHVLHTVGPVWRDGAHDEPALLANCYWRSLRVAEQMGLHSVAF 155
Query: 135 PAISCGV 141
PAISCGV
Sbjct: 156 PAISCGV 162
>gi|440731804|ref|ZP_20911783.1| RNase III inhibitor [Xanthomonas translucens DAR61454]
gi|440370625|gb|ELQ07513.1| RNase III inhibitor [Xanthomonas translucens DAR61454]
Length = 185
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 77/127 (60%), Gaps = 5/127 (3%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++I +GDI++ VD AIV+ NE LL GG AIH AAGP L + C ++PE +P V
Sbjct: 3 IEIWQGDITKLDVD----AIVNAANESLLGGGGVDGAIHRAAGPQLLEECLRLPELKPGV 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
RC GE R T G +L HV+HTVGPV+ + E +L + Y L + + + +AF
Sbjct: 59 RCAVGEVRATGGHRLKARHVLHTVGPVWRDGAHDEPALLGNCYWRSLRLAEQMGLHSVAF 118
Query: 135 PAISCGV 141
PAISCGV
Sbjct: 119 PAISCGV 125
>gi|218782793|ref|YP_002434111.1| Appr-1-p processing protein [Desulfatibacillum alkenivorans AK-01]
gi|218764177|gb|ACL06643.1| Appr-1-p processing domain protein [Desulfatibacillum alkenivorans
AK-01]
Length = 175
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 83/142 (58%), Gaps = 13/142 (9%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPG 80
GDI++ VD AIV+ N LL GG AIH AAGP L + C + C G
Sbjct: 14 GDITKLNVD----AIVNAANRSLLGGGGVDGAIHRAAGPQLLEECRTLN------GCETG 63
Query: 81 EARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCG 140
EA+IT G+ L HVIHTVGPV++ NP ++L + YK+ L++ + N++ IAFPAISCG
Sbjct: 64 EAKITKGYNLSAKHVIHTVGPVYSRESNPAELLANCYKSSLALARDNHLLSIAFPAISCG 123
Query: 141 VSQI-MTHAIK--LQTNCGFLE 159
V + A K + T C FL+
Sbjct: 124 VYGYPLEEACKVAVDTVCEFLK 145
>gi|349612517|ref|ZP_08891735.1| hypothetical protein HMPREF1027_01162 [Lactobacillus sp. 7_1_47FAA]
gi|348608681|gb|EGY58652.1| hypothetical protein HMPREF1027_01162 [Lactobacillus sp. 7_1_47FAA]
Length = 171
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 82/131 (62%), Gaps = 12/131 (9%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+L++ K DI+R VD AIV+ N+ LL GG AIH+AAGP+L++ C ++
Sbjct: 2 NLRVVKEDITRLKVD----AIVNAANKTLLGGGGVDGAIHQAAGPELKEVCRKLNG---- 53
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED--ILRSAYKNCLSVGKANNIQYI 132
C GEA+IT FKLP +VIHTVGP++ FH E+ +LRS Y N L++ KA ++ I
Sbjct: 54 --CMTGEAKITEAFKLPAKYVIHTVGPIYPFHTISENKKLLRSCYINSLNIAKAYKLKSI 111
Query: 133 AFPAISCGVSQ 143
AF IS GV +
Sbjct: 112 AFSCISTGVYK 122
>gi|309804390|ref|ZP_07698465.1| macro domain protein [Lactobacillus iners LactinV 11V1-d]
gi|308163524|gb|EFO65796.1| macro domain protein [Lactobacillus iners LactinV 11V1-d]
Length = 171
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 82/131 (62%), Gaps = 12/131 (9%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+L++ K DI+R VD AIV+ N+ LL GG AIH+AAGP+L++ C ++
Sbjct: 2 NLRVIKDDITRLKVD----AIVNAANKTLLGGGGVDGAIHQAAGPELKEVCRKLNG---- 53
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED--ILRSAYKNCLSVGKANNIQYI 132
C GEA+IT FKLP +VIHTVGP++ FH E+ +LRS Y N L++ KA ++ I
Sbjct: 54 --CMTGEAKITEAFKLPAKYVIHTVGPIYPFHTISENKKLLRSCYINSLNIAKAYKLKSI 111
Query: 133 AFPAISCGVSQ 143
AF IS GV +
Sbjct: 112 AFSCISTGVYK 122
>gi|190575645|ref|YP_001973490.1| hypothetical protein Smlt3795 [Stenotrophomonas maltophilia K279a]
gi|190013567|emb|CAQ47202.1| putative Appr-1-p processing protein [Stenotrophomonas maltophilia
K279a]
Length = 199
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 77/127 (60%), Gaps = 5/127 (3%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ +GDI+ VD AIV+ NE LL GG AIH AAGP L C Q+PE +P V
Sbjct: 3 IEVWQGDITTLAVD----AIVNAANETLLGGGGVDGAIHRAAGPALLAECGQLPELRPGV 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAF 134
RCP GE T + LP +V+HTVGPV++ E +L + Y L + ++ +Q IAF
Sbjct: 59 RCPTGEVPATSAYALPARYVLHTVGPVWHDGQRDEPALLANCYWKSLQLAESLGVQSIAF 118
Query: 135 PAISCGV 141
PAISCGV
Sbjct: 119 PAISCGV 125
>gi|58583034|ref|YP_202050.1| hypothetical protein XOO3411 [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|84624868|ref|YP_452240.1| hypothetical protein XOO_3211 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|58427628|gb|AAW76665.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|84368808|dbj|BAE69966.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 195
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 74/128 (57%), Gaps = 7/128 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ +GDI+ VD IV+ NE LL GG AIH AAGP L AC +P +P V
Sbjct: 19 IEVWQGDITELDVD----VIVNAANESLLGGGGVDGAIHRAAGPRLLDACKALPHVRPGV 74
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF--NFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
RCP GE RIT GF L HV HTVGPV+ H PE L + Y L + + + IA
Sbjct: 75 RCPTGEIRITDGFNLKARHVFHTVGPVWRDGKHNEPEQ-LANCYWQSLKLAEQMLLHSIA 133
Query: 134 FPAISCGV 141
FPAISCG+
Sbjct: 134 FPAISCGI 141
>gi|170780549|ref|YP_001708881.1| hypothetical protein CMS_0093 [Clavibacter michiganensis subsp.
sepedonicus]
gi|169155117|emb|CAQ00217.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
sepedonicus]
Length = 177
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 77/128 (60%), Gaps = 4/128 (3%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T ++ +GDI+R VD AIV+ N LL GG AIH AAGP+L AC ++ +
Sbjct: 2 TLIEAVRGDITRQDVD----AIVNAANSSLLGGGGVDGAIHRAAGPELLAACRRVRADEL 57
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
P G+A TPGF+LP HVIHTVGPV++ + +L SAY+ + V A I+ +A
Sbjct: 58 PDGLPAGDAIATPGFRLPARHVIHTVGPVWSRSDDRTAVLASAYRRSIEVASALGIRSVA 117
Query: 134 FPAISCGV 141
FPA+S GV
Sbjct: 118 FPAVSAGV 125
>gi|161503766|ref|YP_001570878.1| hypothetical protein SARI_01851 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:- str. RSK2980]
gi|160865113|gb|ABX21736.1| hypothetical protein SARI_01851 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 179
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 90/166 (54%), Gaps = 10/166 (6%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
+ L++ +GDI++ VD AIV+ N L+ GG AIH AAGP L AC +I Q
Sbjct: 3 SRLQVIQGDITQLSVD----AIVNAANASLMGGGGVDGAIHRAAGPALLDACKKIRRQQG 58
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
CP G A ITP KL VIHTVGPV+ + E ++L AY+NCL + +AN + I
Sbjct: 59 E--CPTGHAVITPAGKLSAKAVIHTVGPVWRGGEHQEAELLEEAYRNCLLLAEANRYRSI 116
Query: 133 AFPAISCGV---SQIMTHAIKLQTNCGFLESFWVELSAKVTTYDMD 175
AFPAISCGV + I ++T F+ + + YD +
Sbjct: 117 AFPAISCGVYGYPRAQAAEIAVRTVSDFITRYALPEQVYFVCYDEE 162
>gi|325922339|ref|ZP_08184116.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Xanthomonas gardneri ATCC 19865]
gi|325547194|gb|EGD18271.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Xanthomonas gardneri ATCC 19865]
Length = 179
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 75/129 (58%), Gaps = 7/129 (5%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+++ +GDI+ VD IV+ NE LL G AIH AAGP L +AC +P+ +P
Sbjct: 2 KIEVWQGDITELDVD----VIVNAANETLLGGSGVDGAIHRAAGPRLLEACEALPQMRPG 57
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVF--NFHCNPEDILRSAYKNCLSVGKANNIQYI 132
VRCP GE RIT GF L HV HTVGPV+ H PE L + Y L + + + I
Sbjct: 58 VRCPTGEIRITDGFDLKARHVFHTVGPVWRDGKHNEPEQ-LANCYWQSLKLAEQMMLHSI 116
Query: 133 AFPAISCGV 141
AFPAISCG+
Sbjct: 117 AFPAISCGI 125
>gi|309807995|ref|ZP_07701920.1| macro domain protein [Lactobacillus iners LactinV 01V1-a]
gi|325912040|ref|ZP_08174439.1| macro domain protein [Lactobacillus iners UPII 143-D]
gi|308168768|gb|EFO70861.1| macro domain protein [Lactobacillus iners LactinV 01V1-a]
gi|325476146|gb|EGC79313.1| macro domain protein [Lactobacillus iners UPII 143-D]
Length = 171
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 82/131 (62%), Gaps = 12/131 (9%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+L++ K DI+R VD AIV+ N+ LL GG AIH+AAGP+L++ C ++
Sbjct: 2 NLRVIKDDITRLKVD----AIVNAANKTLLGGGGVDGAIHQAAGPELKEVCRKLNG---- 53
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED--ILRSAYKNCLSVGKANNIQYI 132
C GEA+IT FKLP ++IHTVGP++ FH E+ +LRS Y N L++ KA ++ I
Sbjct: 54 --CMTGEAKITEAFKLPAKYIIHTVGPIYPFHTISENKKLLRSCYINSLNIAKAYKLKSI 111
Query: 133 AFPAISCGVSQ 143
AF IS GV +
Sbjct: 112 AFSCISTGVYK 122
>gi|429212220|ref|ZP_19203385.1| putative phophatase [Pseudomonas sp. M1]
gi|428156702|gb|EKX03250.1| putative phophatase [Pseudomonas sp. M1]
Length = 172
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 80/131 (61%), Gaps = 11/131 (8%)
Query: 12 TKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEA 71
+ + + +GDI+ +D AIV+ N LL GG AIH AAGP+L C +
Sbjct: 2 SNPEIHVWQGDITTLRID----AIVNAANSSLLGGGGVDGAIHRAAGPELANHCRNLGG- 56
Query: 72 QPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQ 130
C GEARITPGF+LP +HVIHTVGPV+ + E D+L + Y+N L++ + + ++
Sbjct: 57 -----CRTGEARITPGFRLPAAHVIHTVGPVWRGGGHGEPDLLAACYRNSLALAEEHELE 111
Query: 131 YIAFPAISCGV 141
IAFPAISCG+
Sbjct: 112 GIAFPAISCGI 122
>gi|118578750|ref|YP_900000.1| appr-1-p processing domain-containing protein [Pelobacter
propionicus DSM 2379]
gi|118501460|gb|ABK97942.1| Appr-1-p processing domain protein [Pelobacter propionicus DSM
2379]
Length = 173
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 77/129 (59%), Gaps = 11/129 (8%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T+++I + DI+ VD AIV+ N LL GG AIH AAGPDL + C +
Sbjct: 2 TTIEIIQTDITTLAVD----AIVNAANSTLLGGGGVDGAIHRAAGPDLVQECATLGG--- 54
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
CP GEA+IT G+ LP HVIHTVGPV++ E +L SAY+ C V + +N+ I
Sbjct: 55 ---CPTGEAKITKGYLLPARHVIHTVGPVWHGGGKGEPKLLESAYRTCFRVARQHNLASI 111
Query: 133 AFPAISCGV 141
AFPAIS G+
Sbjct: 112 AFPAISAGI 120
>gi|312873872|ref|ZP_07733914.1| macro domain protein [Lactobacillus iners LEAF 2052A-d]
gi|311090598|gb|EFQ49000.1| macro domain protein [Lactobacillus iners LEAF 2052A-d]
Length = 171
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 82/131 (62%), Gaps = 12/131 (9%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+L++ K DI+R VD AIV+ N+ LL GG AIH+AAGP+L++ C ++
Sbjct: 2 NLRVVKEDITRLKVD----AIVNAANKTLLGGGGVDGAIHQAAGPELKEVCRKLNG---- 53
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED--ILRSAYKNCLSVGKANNIQYI 132
C GEA+IT FKLP ++IHTVGP++ FH E+ +LRS Y N L++ KA ++ I
Sbjct: 54 --CMTGEAKITEAFKLPAKYIIHTVGPIYPFHTISENKKLLRSCYINSLNIAKAYKLKSI 111
Query: 133 AFPAISCGVSQ 143
AF IS GV +
Sbjct: 112 AFSCISTGVYK 122
>gi|58338104|ref|YP_194689.1| hypothetical protein LBA1858 [Lactobacillus acidophilus NCFM]
gi|227902718|ref|ZP_04020523.1| Appr-1-p processing domain protein [Lactobacillus acidophilus ATCC
4796]
gi|58255421|gb|AAV43658.1| hypothetical protein LBA1858 [Lactobacillus acidophilus NCFM]
gi|227869520|gb|EEJ76941.1| Appr-1-p processing domain protein [Lactobacillus acidophilus ATCC
4796]
Length = 168
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 75/130 (57%), Gaps = 12/130 (9%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T +KI +GDI++ +DAIV+ N+ LL GG AIH AAGP+L C +
Sbjct: 2 TDIKIVQGDITKM----KADAIVNAANKSLLGGGGVDGAIHAAAGPELLAECRTLHG--- 54
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED--ILRSAYKNCLSVGKANNIQY 131
C GEA+IT G+ L HVIHTVGP++ FH ED +L Y+N L + K NN+
Sbjct: 55 ---CDTGEAKITKGYNLLAKHVIHTVGPIYRFHTLEEDAKLLTDCYRNSLDLAKKNNLHS 111
Query: 132 IAFPAISCGV 141
I F +IS GV
Sbjct: 112 IIFSSISTGV 121
>gi|309807214|ref|ZP_07701187.1| macro domain protein [Lactobacillus iners LactinV 03V1-b]
gi|308166397|gb|EFO68603.1| macro domain protein [Lactobacillus iners LactinV 03V1-b]
Length = 136
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 82/131 (62%), Gaps = 12/131 (9%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+L++ K DI+R VD AIV+ N+ LL GG AIH+AAGP+L++ C ++
Sbjct: 2 NLRVIKDDITRLKVD----AIVNAANKTLLGGGGVDGAIHQAAGPELKEVCRKLNG---- 53
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED--ILRSAYKNCLSVGKANNIQYI 132
C GEA+IT FKLP +VIHTVGP++ FH E+ +LRS Y N L++ KA ++ I
Sbjct: 54 --CMTGEAKITEAFKLPAKYVIHTVGPIYPFHTISENKKLLRSCYINSLNIAKAYKLKSI 111
Query: 133 AFPAISCGVSQ 143
AF IS G+ +
Sbjct: 112 AFSCISTGIYK 122
>gi|336054901|ref|YP_004563188.1| Appr-1-p processing domain-containing protein [Lactobacillus
kefiranofaciens ZW3]
gi|333958278|gb|AEG41086.1| Appr-1-p processing domain protein [Lactobacillus kefiranofaciens
ZW3]
Length = 167
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 74/125 (59%), Gaps = 10/125 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+KI +GDI++ +DAIV+ N LL GG AIH AAGP LQ+ C +
Sbjct: 4 IKIIQGDITKM----KADAIVNAANNSLLGGGGVDGAIHAAAGPHLQEECMALH------ 53
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFP 135
C GEA IT G+ LP HVIHTVGPV++ D+L+S Y+N L++ K N+ I FP
Sbjct: 54 GCHTGEAEITQGYDLPAKHVIHTVGPVYSGAKRDVDLLKSCYRNSLNLAKKANLHSIIFP 113
Query: 136 AISCG 140
AIS G
Sbjct: 114 AISTG 118
>gi|227893964|ref|ZP_04011769.1| Appr-1-p processing domain protein [Lactobacillus ultunensis DSM
16047]
gi|227864213|gb|EEJ71634.1| Appr-1-p processing domain protein [Lactobacillus ultunensis DSM
16047]
Length = 167
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 76/127 (59%), Gaps = 10/127 (7%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T +KI +GDI++ +DAIV+ N LL GG AIH AAGP L + C +
Sbjct: 2 TDIKIIQGDITKM----KADAIVNAANNSLLGGGGVDGAIHAAAGPHLLEECMTLH---- 53
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
CP G+A+IT G+ LP HVIHTVGPV++ + D+LR+ Y+N L + K ++ I
Sbjct: 54 --GCPTGDAKITLGYDLPAKHVIHTVGPVYSGKSSDCDMLRACYRNSLDLAKKADLHSII 111
Query: 134 FPAISCG 140
FPAIS G
Sbjct: 112 FPAISTG 118
>gi|377832494|ref|ZP_09815452.1| RNase III regulator YmdB [Lactobacillus mucosae LM1]
gi|377553686|gb|EHT15407.1| RNase III regulator YmdB [Lactobacillus mucosae LM1]
Length = 167
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 82/128 (64%), Gaps = 11/128 (8%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
++KI +GDI+++ VD AIV+ N L+ GG AIH AAGP L AC +
Sbjct: 4 TIKIERGDITKYQVD----AIVNAANTTLMGGGGVDGAIHRAAGPALYVACEKFHG---- 55
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIA 133
CP GEARITPGF+LP ++IHT GP+++ + E D+L+++Y+N L + + + Q +A
Sbjct: 56 --CPTGEARITPGFQLPAKYIIHTPGPIWHGGDHGEADLLKNSYRNSLQLAEHYHCQTVA 113
Query: 134 FPAISCGV 141
FP+IS GV
Sbjct: 114 FPSISTGV 121
>gi|341615096|ref|ZP_08701965.1| Appr-1-p processing domain-containing protein [Citromicrobium sp.
JLT1363]
Length = 170
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 76/127 (59%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L+I +GDI+R VD AIV+ N LL GG AIH AAG L + C Q+
Sbjct: 5 LEIHRGDITRLDVD----AIVNAANSSLLGGGGVDGAIHRAAGKGLLEECRQLGG----- 55
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
C G+ARIT G+ LP HVIHTVGPV++ E ++L Y+N L V +AN ++ IAF
Sbjct: 56 -CETGQARITGGYDLPARHVIHTVGPVWSGGDKGEPELLADCYRNSLEVARANGVRSIAF 114
Query: 135 PAISCGV 141
PAIS G+
Sbjct: 115 PAISTGI 121
>gi|309809332|ref|ZP_07703199.1| macro domain protein [Lactobacillus iners SPIN 2503V10-D]
gi|308170344|gb|EFO72370.1| macro domain protein [Lactobacillus iners SPIN 2503V10-D]
Length = 136
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 82/131 (62%), Gaps = 12/131 (9%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+L++ K DI+R VD AIV+ N+ LL GG AIH+AAGP+L++ C ++
Sbjct: 2 NLRVIKDDITRLKVD----AIVNAANKTLLGGGGVDGAIHQAAGPELKEVCRKLNG---- 53
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED--ILRSAYKNCLSVGKANNIQYI 132
C GEA+IT FKLP ++IHTVGP++ FH E+ +LRS Y N L++ KA ++ I
Sbjct: 54 --CMTGEAKITEAFKLPAKYIIHTVGPIYPFHTISENKKLLRSCYINSLNIAKAYKLKSI 111
Query: 133 AFPAISCGVSQ 143
AF IS GV +
Sbjct: 112 AFSCISTGVYK 122
>gi|329920968|ref|ZP_08277501.1| macro domain protein [Lactobacillus iners SPIN 1401G]
gi|328935417|gb|EGG31890.1| macro domain protein [Lactobacillus iners SPIN 1401G]
Length = 171
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 81/131 (61%), Gaps = 12/131 (9%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+L++ K DI+R VD AIV+ N+ LL GG AIH AAGP+L++ C ++
Sbjct: 2 NLRVVKEDITRLKVD----AIVNAANKTLLGGGGVDGAIHHAAGPELKEVCRKLNG---- 53
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED--ILRSAYKNCLSVGKANNIQYI 132
C GEA+IT FKLP ++IHTVGP++ FH E+ +LRS Y N L++ KA ++ I
Sbjct: 54 --CMTGEAKITEAFKLPAKYIIHTVGPIYPFHTISENKKLLRSCYINSLNIAKAYKLKSI 111
Query: 133 AFPAISCGVSQ 143
AF IS GV +
Sbjct: 112 AFSCISTGVYK 122
>gi|156740445|ref|YP_001430574.1| appr-1-p processing domain-containing protein [Roseiflexus
castenholzii DSM 13941]
gi|156231773|gb|ABU56556.1| Appr-1-p processing domain protein [Roseiflexus castenholzii DSM
13941]
Length = 181
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 85/141 (60%), Gaps = 16/141 (11%)
Query: 1 MTFKVQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPD 60
M FK+ +L++ +G+I V++ DAIV+ NE L GG + AIH AAGP+
Sbjct: 2 MQFKIGL------ATLELIRGNI----VEQDVDAIVNAANETLAPGGGVSGAIHRAAGPE 51
Query: 61 LQKACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNC 120
L +AC +I CP GEARIT G+ L HVIH VGP ++ + ++L SAY++
Sbjct: 52 LAEACARIGG------CPTGEARITAGYHLKARHVIHAVGPRYSGNPRDAELLASAYRSS 105
Query: 121 LSVGKANNIQYIAFPAISCGV 141
L + + + +Q+IAFP+IS G+
Sbjct: 106 LLLAEQHGLQHIAFPSISTGI 126
>gi|299749719|ref|XP_001836289.2| Macrod2 protein [Coprinopsis cinerea okayama7#130]
gi|298408568|gb|EAU85473.2| Macrod2 protein [Coprinopsis cinerea okayama7#130]
Length = 274
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 88/154 (57%), Gaps = 19/154 (12%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T L S+GDI++ VD AIV+ N+ LL GG AIH AAGP L C Q+ A+
Sbjct: 99 TGLDFSQGDITKLQVD----AIVNAANKSLLGGGGVDGAIHAAAGPKLLAECKQLNGART 154
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE---DILRSAYKNCLSVGKANNIQ 130
GE++IT G+ LP HVIHTVGPV+N PE ++L+S YK L V N ++
Sbjct: 155 ------GESKITRGYDLPARHVIHTVGPVYN-ASQPEEKAELLKSCYKTSLEVAVENGLK 207
Query: 131 YIAFPAISCGVSQI----MTHAIKLQTNCGFLES 160
++AFP++S G+ TH I ++T FLE
Sbjct: 208 HVAFPSVSTGIYGYPIVDATH-IAIRTTREFLEG 240
>gi|381210682|ref|ZP_09917753.1| hypothetical protein LGrbi_12208 [Lentibacillus sp. Grbi]
Length = 183
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 88/153 (57%), Gaps = 9/153 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
+ +L++ GDI++ + +DAIV+ N L+ GG AIH AAG DL + C Q+ + Q
Sbjct: 7 RNTLELMTGDITK----QKTDAIVNAANGTLMGGGGVDGAIHRAAGKDLLEECKQVRQEQ 62
Query: 73 PRV-RCPPGEARITPGFKLPVSHVIHTVGPVFN-FHCNPEDILRSAYKNCLSVGKANNIQ 130
+ G A IT G+ LP HVIHTVGPV+N + N E++L + Y++ L + N++
Sbjct: 63 LNGDKLQTGNAVITAGYNLPTKHVIHTVGPVWNKGNQNQEELLTNCYRHSLELAAENDVA 122
Query: 131 YIAFPAISCGVSQI---MTHAIKLQTNCGFLES 160
IAFP+IS GV + LQT FL++
Sbjct: 123 SIAFPSISTGVYSFPIDLAAKTALQTITDFLKN 155
>gi|295425379|ref|ZP_06818079.1| RNase III regulator YmdB [Lactobacillus amylolyticus DSM 11664]
gi|295064931|gb|EFG55839.1| RNase III regulator YmdB [Lactobacillus amylolyticus DSM 11664]
Length = 170
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 76/130 (58%), Gaps = 12/130 (9%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
+ ++I +GDI++ +DAIV+ N+ LL GG AIH AAGP L C +
Sbjct: 2 SEIEIVQGDITKM----KADAIVNAANKSLLGGGGVDGAIHAAAGPQLLAECRTLH---- 53
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED--ILRSAYKNCLSVGKANNIQY 131
C GEA+IT G+ LP HVIHTVGP++ FH ED +L + Y+N L + K NN+
Sbjct: 54 --GCDTGEAKITKGYNLPAKHVIHTVGPIYRFHSPEEDAKLLAACYQNSLDLAKKNNLHS 111
Query: 132 IAFPAISCGV 141
I F +IS GV
Sbjct: 112 IIFSSISTGV 121
>gi|407772629|ref|ZP_11119931.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Thalassospira profundimaris WP0211]
gi|407284582|gb|EKF10098.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Thalassospira profundimaris WP0211]
Length = 181
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 79/128 (61%), Gaps = 11/128 (8%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+++I+ GDI+ VD AIV+ NE LL GG AIH AAGP+L AC +P
Sbjct: 12 AIRITVGDITTLDVD----AIVNAANEALLPGGGVCGAIHHAAGPELANAC------RPL 61
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIA 133
CP G+ARITPGF L +VIH VGPV++ + E D+L S Y+N + + NN+ +A
Sbjct: 62 APCPTGDARITPGFNLKAKYVIHAVGPVWHGGDHGEADLLASCYRNSILLAVENNLASVA 121
Query: 134 FPAISCGV 141
FPAIS G+
Sbjct: 122 FPAISTGI 129
>gi|254227543|ref|ZP_04920975.1| appr-1-p processing enzyme family protein [Vibrio sp. Ex25]
gi|262396194|ref|YP_003288047.1| hypothetical protein VEA_000896 [Vibrio sp. Ex25]
gi|151940155|gb|EDN58981.1| appr-1-p processing enzyme family protein [Vibrio sp. Ex25]
gi|262339788|gb|ACY53582.1| hypothetical protein VEA_000896 [Vibrio sp. Ex25]
Length = 170
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 77/128 (60%), Gaps = 5/128 (3%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
++ + +GDI+ VD AIV+ N +L GG AIH AAGP L ACY I +
Sbjct: 2 NAISLVQGDITTAHVD----AIVNAANPRMLGGGGVDGAIHRAAGPALINACYAIDDVD- 56
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
+RCP G+ARIT L +VIH VGP+++ +P+ +L SAY+ L + AN+ Q +A
Sbjct: 57 GIRCPFGDARITEAGNLNARYVIHAVGPIYDKFADPKAVLESAYQRSLELALANHCQSVA 116
Query: 134 FPAISCGV 141
PAISCGV
Sbjct: 117 LPAISCGV 124
>gi|345304382|ref|YP_004826284.1| Appr-1-p processing domain-containing protein [Rhodothermus marinus
SG0.5JP17-172]
gi|345113615|gb|AEN74447.1| Appr-1-p processing domain protein [Rhodothermus marinus
SG0.5JP17-172]
Length = 181
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 81/139 (58%), Gaps = 13/139 (9%)
Query: 3 FKVQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQ 62
+VQ F+ L+I +GDI++ +AIV+ N L+ GG A AIH AAGP+L
Sbjct: 1 MRVQQGDFT----LEIVQGDITKQP---DMEAIVNAANAQLMPGGGVAGAIHRAAGPELA 53
Query: 63 KACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLS 122
+AC +P PG+A ITPGF+LP +VIH +GPV+ + IL AY+N L
Sbjct: 54 EAC------RPLAPIRPGQAVITPGFRLPNRYVIHVLGPVYGRDVPSDQILAEAYRNALK 107
Query: 123 VGKANNIQYIAFPAISCGV 141
+ + I+ +AFPAIS GV
Sbjct: 108 LADEHGIRSVAFPAISTGV 126
>gi|253698986|ref|YP_003020175.1| Appr-1-p processing protein [Geobacter sp. M21]
gi|251773836|gb|ACT16417.1| Appr-1-p processing domain protein [Geobacter sp. M21]
Length = 177
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 77/128 (60%), Gaps = 13/128 (10%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++I +GDI++ VD AIV+ N LL GG AIH AAGP+L C +
Sbjct: 10 VEIVRGDITKLAVD----AIVNAANGTLLGGGGVDGAIHRAAGPELLAECRTLSG----- 60
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNF--HCNPEDILRSAYKNCLSVGKANNIQYIA 133
C GEA+IT G++LP HVIHTVGPV++ H PE +LRS Y+N + + N + IA
Sbjct: 61 -CTAGEAKITAGYRLPARHVIHTVGPVWHGGSHGEPE-LLRSCYRNACRLARENGLSSIA 118
Query: 134 FPAISCGV 141
FPAIS GV
Sbjct: 119 FPAISTGV 126
>gi|28899958|ref|NP_799613.1| hypothetical protein VPA0103 [Vibrio parahaemolyticus RIMD 2210633]
gi|260363252|ref|ZP_05776121.1| appr-1-p processing enzyme family protein [Vibrio parahaemolyticus
K5030]
gi|260880539|ref|ZP_05892894.1| appr-1-p processing enzyme family protein [Vibrio parahaemolyticus
AN-5034]
gi|260898508|ref|ZP_05907004.1| appr-1-p processing enzyme family protein [Vibrio parahaemolyticus
Peru-466]
gi|260902265|ref|ZP_05910660.1| appr-1-p processing enzyme family protein [Vibrio parahaemolyticus
AQ4037]
gi|38503313|sp|Q87JZ5.1|Y4103_VIBPA RecName: Full=Macro domain-containing protein VPA0103
gi|28808241|dbj|BAC61446.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
gi|308084956|gb|EFO34651.1| appr-1-p processing enzyme family protein [Vibrio parahaemolyticus
Peru-466]
gi|308092465|gb|EFO42160.1| appr-1-p processing enzyme family protein [Vibrio parahaemolyticus
AN-5034]
gi|308110509|gb|EFO48049.1| appr-1-p processing enzyme family protein [Vibrio parahaemolyticus
AQ4037]
gi|308112275|gb|EFO49815.1| appr-1-p processing enzyme family protein [Vibrio parahaemolyticus
K5030]
Length = 170
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 77/128 (60%), Gaps = 5/128 (3%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
++ + +GDI+ VD AIV+ N +L GG AIH AAGP L ACY + +
Sbjct: 2 NAISLVQGDITTAHVD----AIVNAANPRMLGGGGVDGAIHRAAGPALINACYAVDDVD- 56
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
+RCP G+ARIT L +VIH VGP+++ +P+ +L SAY+ L + AN+ Q +A
Sbjct: 57 GIRCPFGDARITEAGNLNARYVIHAVGPIYDKFADPKTVLESAYQRSLDLALANHCQSVA 116
Query: 134 FPAISCGV 141
PAISCGV
Sbjct: 117 LPAISCGV 124
>gi|433677919|ref|ZP_20509846.1| UPF0189 protein [Xanthomonas translucens pv. translucens DSM 18974]
gi|430816972|emb|CCP40278.1| UPF0189 protein [Xanthomonas translucens pv. translucens DSM 18974]
Length = 222
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 76/127 (59%), Gaps = 5/127 (3%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++I +GDI+ VD AIV+ NE LL GG AIH AAGP L + C ++PE +P V
Sbjct: 40 IEIWQGDITELDVD----AIVNAANESLLGGGGVDGAIHRAAGPQLLEECLRLPELKPGV 95
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAF 134
RC GE R T G +L HV+HTVGPV+ + E +L + Y L + + + +AF
Sbjct: 96 RCAVGEVRATGGHRLKARHVLHTVGPVWRDGAHDEPALLGNCYWRSLRLAEQMGLHSVAF 155
Query: 135 PAISCGV 141
PAISCGV
Sbjct: 156 PAISCGV 162
>gi|302791187|ref|XP_002977360.1| hypothetical protein SELMODRAFT_107247 [Selaginella moellendorffii]
gi|300154730|gb|EFJ21364.1| hypothetical protein SELMODRAFT_107247 [Selaginella moellendorffii]
Length = 221
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 75/132 (56%), Gaps = 3/132 (2%)
Query: 11 STKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPE 70
S + I KGDI+ W VD +D IV+P N+ G AIH GP L AC ++P+
Sbjct: 38 SENCVMAIWKGDIALWHVDGQNDCIVAPANKRCNAGFGVDGAIHRGGGPRLLDACQKLPD 97
Query: 71 AQPR-VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED--ILRSAYKNCLSVGKAN 127
P+ ++C G A IT GF LP S VIH +GPV+ E L +AY L++ +N
Sbjct: 98 VAPQGIKCEVGNAVITRGFNLPASRVIHAIGPVYEDKNRDESERNLTNAYNAALNLATSN 157
Query: 128 NIQYIAFPAISC 139
I+YIAFPA+SC
Sbjct: 158 GIKYIAFPALSC 169
>gi|428174418|gb|EKX43314.1| hypothetical protein GUITHDRAFT_158055 [Guillardia theta CCMP2712]
Length = 137
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 74/124 (59%), Gaps = 20/124 (16%)
Query: 18 ISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRC 77
IS+GDI+++ DAIV+ NE L GG AIH AAG +L +AC ++ E + VRC
Sbjct: 15 ISQGDITKF----KGDAIVNAANERCLGGGGVDGAIHRAAGEELYQACLKLEEVEEGVRC 70
Query: 78 PPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAI 137
P G+A ITPGFKL +VIHT SAY++ L + +N++ IAFPAI
Sbjct: 71 PTGQAVITPGFKLDAKNVIHT----------------SAYRSSLQLANEHNLKSIAFPAI 114
Query: 138 SCGV 141
SCGV
Sbjct: 115 SCGV 118
>gi|333368901|ref|ZP_08461053.1| RNase III regulator YmdB [Psychrobacter sp. 1501(2011)]
gi|332975884|gb|EGK12761.1| RNase III regulator YmdB [Psychrobacter sp. 1501(2011)]
Length = 199
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 78/128 (60%), Gaps = 11/128 (8%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
++K+ + DI+ VD AIV+ N LL GG AIH AAG +L C +
Sbjct: 25 TIKVIQADITTLQVD----AIVNAANSTLLGGGGVDGAIHRAAGRELVAYCRTLQG---- 76
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIA 133
CP GEA+I+PGFKLP +VIHTVGPV++ E ++L + Y+NC+ + + NNI IA
Sbjct: 77 --CPTGEAKISPGFKLPAKYVIHTVGPVWHGGSRGEAELLANCYRNCIDLAQQNNITSIA 134
Query: 134 FPAISCGV 141
FPAIS GV
Sbjct: 135 FPAISTGV 142
>gi|336114092|ref|YP_004568859.1| Appr-1-p processing protein [Bacillus coagulans 2-6]
gi|335367522|gb|AEH53473.1| Appr-1-p processing domain protein [Bacillus coagulans 2-6]
Length = 190
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 89/150 (59%), Gaps = 14/150 (9%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
S KI GDI++ +DAIV+ N LL GG AIH+AAGP L + C ++
Sbjct: 5 SFKIVLGDITK----AKTDAIVNAANTTLLGGGGVDGAIHKAAGPGLLEECRKLN----- 55
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIA 133
CP GEA+IT G++LP +VIHT GPV+ + E ++L ++Y+N L + ++ ++ +A
Sbjct: 56 -GCPTGEAKITKGYRLPAKYVIHTPGPVWQGGGHHEAELLENSYQNSLRLAESKGLRTVA 114
Query: 134 FPAISCGVSQIMTHA---IKLQTNCGFLES 160
FP+IS GV A I ++T C FLE+
Sbjct: 115 FPSISTGVYHYPVDAAARIAVRTICTFLET 144
>gi|225571495|ref|ZP_03780491.1| hypothetical protein CLOHYLEM_07593 [Clostridium hylemonae DSM
15053]
gi|225159572|gb|EEG72191.1| hypothetical protein CLOHYLEM_07593 [Clostridium hylemonae DSM
15053]
Length = 174
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T + + KGDI+R DAIV+ N LL GG AIH+AAGP L + C +
Sbjct: 2 TMIHVIKGDITRLT---DVDAIVNAANSSLLGGGGVDGAIHKAAGPGLLEECRALHG--- 55
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYI 132
CP GEAR+T G++LP +VIHTVGPV+ ED +L Y+NCL I I
Sbjct: 56 ---CPAGEARVTGGYRLPGRYVIHTVGPVWRGGGKKEDEVLAGCYRNCLEAAARKRITSI 112
Query: 133 AFPAISCGV 141
AFPAIS G+
Sbjct: 113 AFPAISTGI 121
>gi|433659264|ref|YP_007300123.1| Macro domain possibly ADP-ribose binding module [Vibrio
parahaemolyticus BB22OP]
gi|432510651|gb|AGB11468.1| Macro domain possibly ADP-ribose binding module [Vibrio
parahaemolyticus BB22OP]
Length = 170
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 77/128 (60%), Gaps = 5/128 (3%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
++ + +GDI+ VD AIV+ N +L GG AIH AAGP L ACY + +
Sbjct: 2 NAISLVQGDITTAHVD----AIVNAANPRMLGGGGVDGAIHRAAGPALINACYAVDDVD- 56
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
+RCP G+ARIT L +VIH VGP+++ +P+ +L SAY+ L + AN+ Q +A
Sbjct: 57 GIRCPFGDARITEAGNLNARYVIHAVGPIYDKFADPKAVLESAYQRSLDLALANHCQSVA 116
Query: 134 FPAISCGV 141
PAISCGV
Sbjct: 117 LPAISCGV 124
>gi|148272017|ref|YP_001221578.1| hypothetical protein CMM_0838 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147829947|emb|CAN00872.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 177
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 74/128 (57%), Gaps = 4/128 (3%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T ++ +GDI+R VD IV N LL GG AIH AAGP+L AC +I
Sbjct: 2 TLIEAVRGDITRQDVD----GIVDAANSSLLGGGGVDGAIHRAAGPELLAACRRIRADGL 57
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
P G+A TPGF+LP HVIHTVGPV++ + +L SAY+ + V A I+ +A
Sbjct: 58 PDGLPAGDAIATPGFRLPARHVIHTVGPVWSASDDRTAVLASAYRRSIEVAAALGIRSVA 117
Query: 134 FPAISCGV 141
FPA+S GV
Sbjct: 118 FPAVSAGV 125
>gi|451970938|ref|ZP_21924161.1| hypothetical protein C408_0773 [Vibrio alginolyticus E0666]
gi|451933043|gb|EMD80714.1| hypothetical protein C408_0773 [Vibrio alginolyticus E0666]
Length = 170
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 77/128 (60%), Gaps = 5/128 (3%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
++ + +GDI+ VD AIV+ N +L GG AIH AAGP L ACY + +
Sbjct: 2 NAISLVQGDITTAHVD----AIVNAANPRMLGGGGVDGAIHRAAGPALINACYAVDDVD- 56
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
+RCP G+ARIT L +VIH VGP+++ +P+ +L SAY+ L + AN+ Q +A
Sbjct: 57 GIRCPFGDARITEAGNLNARYVIHAVGPIYDKFADPKAVLESAYQRSLDLALANHCQSVA 116
Query: 134 FPAISCGV 141
PAISCGV
Sbjct: 117 LPAISCGV 124
>gi|268318092|ref|YP_003291811.1| Appr-1-p processing protein [Rhodothermus marinus DSM 4252]
gi|262335626|gb|ACY49423.1| Appr-1-p processing domain protein [Rhodothermus marinus DSM 4252]
Length = 181
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 81/139 (58%), Gaps = 13/139 (9%)
Query: 3 FKVQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQ 62
+VQ F+ L+I +GDI++ +AIV+ N L+ GG A AIH AAGP+L
Sbjct: 1 MRVQQGDFT----LEIVQGDITKQP---DMEAIVNAANAQLMPGGGVAGAIHRAAGPELA 53
Query: 63 KACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLS 122
+AC +P PG+A ITPGF+LP +VIH +GPV+ + IL AY+N L
Sbjct: 54 EAC------RPLAPIRPGQAVITPGFRLPNRYVIHVLGPVYGRDVPSDRILAEAYRNALK 107
Query: 123 VGKANNIQYIAFPAISCGV 141
+ + I+ +AFPAIS GV
Sbjct: 108 LADEHGIRSVAFPAISTGV 126
>gi|443469568|ref|ZP_21059722.1| Putative phosphatase [Pseudomonas pseudoalcaligenes KF707]
gi|442899020|gb|ELS25551.1| Putative phosphatase [Pseudomonas pseudoalcaligenes KF707]
Length = 166
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 75/128 (58%), Gaps = 13/128 (10%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++I +GDI+ +D AIV+ N LL GG AIH AAGP+L C +
Sbjct: 3 IRIWQGDITTLALD----AIVNAANSTLLGGGGVDGAIHRAAGPELLAHCRTLGG----- 53
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNF--HCNPEDILRSAYKNCLSVGKANNIQYIA 133
CP GEARITPGF+LP VIHTVGPV+ H P +L Y+N L++ A + IA
Sbjct: 54 -CPTGEARITPGFRLPARFVIHTVGPVWRGGDHGEP-GLLACCYRNSLALADAQGLASIA 111
Query: 134 FPAISCGV 141
FPAISCGV
Sbjct: 112 FPAISCGV 119
>gi|153837625|ref|ZP_01990292.1| appr-1-p processing [Vibrio parahaemolyticus AQ3810]
gi|417321791|ref|ZP_12108325.1| hypothetical protein VP10329_04077 [Vibrio parahaemolyticus 10329]
gi|149749017|gb|EDM59836.1| appr-1-p processing [Vibrio parahaemolyticus AQ3810]
gi|328469945|gb|EGF40856.1| hypothetical protein VP10329_04077 [Vibrio parahaemolyticus 10329]
Length = 170
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 77/128 (60%), Gaps = 5/128 (3%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
++ + +GDI+ VD AIV+ N +L GG AIH AAGP L ACY + +
Sbjct: 2 NAISLVQGDITTAHVD----AIVNAANPRMLGGGGVDGAIHRAAGPALINACYAVDDVD- 56
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
+RCP G+ARIT L +VIH VGP+++ +P+ +L SAY+ L + AN+ Q +A
Sbjct: 57 GIRCPFGDARITEAGNLNARYVIHAVGPIYDKFADPKAVLESAYQRSLDLALANHCQSVA 116
Query: 134 FPAISCGV 141
PAISCGV
Sbjct: 117 LPAISCGV 124
>gi|197116755|ref|YP_002137182.1| ribonuclease III-modulating protein YmdB [Geobacter bemidjiensis
Bem]
gi|197086115|gb|ACH37386.1| O-acetyl-ADP-ribose deacetylase [Geobacter bemidjiensis Bem]
Length = 177
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 79/134 (58%), Gaps = 13/134 (9%)
Query: 11 STKTS--LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQI 68
+TK S ++I +GDI+R VD AIV+ N LL GG AIH AAGP+L C +
Sbjct: 3 ATKLSERVEIIRGDITRIAVD----AIVNAANGTLLGGGGVDGAIHRAAGPELLAECRTL 58
Query: 69 PEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKAN 127
C GEA+IT G++LP HVIHTVGPV++ E ++LRS Y+N + N
Sbjct: 59 SG------CATGEAKITAGYRLPARHVIHTVGPVWHGGSRGEPELLRSCYRNACRLAHEN 112
Query: 128 NIQYIAFPAISCGV 141
+ IAFPAIS GV
Sbjct: 113 GLSSIAFPAISAGV 126
>gi|449015795|dbj|BAM79197.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 220
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 79/135 (58%), Gaps = 11/135 (8%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T L + + DI+R VD AIV+ NE +L GG AIH AAG +L +AC ++PE +P
Sbjct: 29 TRLVLKQADITREAVD----AIVNAANERMLGGGGVDGAIHRAAGKELLEACKRVPEKRP 84
Query: 74 RVRCPPGEA-------RITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKA 126
VRCP GEA ++ G V ++I+TVGP++ +LRSAY+N L
Sbjct: 85 GVRCPTGEAVPIKITWPVSEGNLPQVRYIINTVGPIYQNAEKSAPLLRSAYRNSLLTAIE 144
Query: 127 NNIQYIAFPAISCGV 141
+N + IAFP ISCGV
Sbjct: 145 HNCRSIAFPTISCGV 159
>gi|259501187|ref|ZP_05744089.1| RNase III regulator YmdB [Lactobacillus iners DSM 13335]
gi|302190995|ref|ZP_07267249.1| hypothetical protein LineA_03165 [Lactobacillus iners AB-1]
gi|309804920|ref|ZP_07698981.1| macro domain protein [Lactobacillus iners LactinV 09V1-c]
gi|312871678|ref|ZP_07731769.1| macro domain protein [Lactobacillus iners LEAF 3008A-a]
gi|312872039|ref|ZP_07732115.1| macro domain protein [Lactobacillus iners LEAF 2062A-h1]
gi|312874504|ref|ZP_07734531.1| macro domain protein [Lactobacillus iners LEAF 2053A-b]
gi|325912553|ref|ZP_08174937.1| macro domain protein [Lactobacillus iners UPII 60-B]
gi|259167409|gb|EEW51904.1| RNase III regulator YmdB [Lactobacillus iners DSM 13335]
gi|308165755|gb|EFO67977.1| macro domain protein [Lactobacillus iners LactinV 09V1-c]
gi|311089977|gb|EFQ48394.1| macro domain protein [Lactobacillus iners LEAF 2053A-b]
gi|311092431|gb|EFQ50799.1| macro domain protein [Lactobacillus iners LEAF 2062A-h1]
gi|311092803|gb|EFQ51156.1| macro domain protein [Lactobacillus iners LEAF 3008A-a]
gi|325478141|gb|EGC81269.1| macro domain protein [Lactobacillus iners UPII 60-B]
Length = 171
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 81/131 (61%), Gaps = 12/131 (9%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+L++ K DI+R VD AIV+ N+ LL GG AIH+AAGP+L++ C ++
Sbjct: 2 NLRVVKEDITRLKVD----AIVNAANKTLLGGGGVDGAIHQAAGPELKEVCRKLN----- 52
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED--ILRSAYKNCLSVGKANNIQYI 132
C GEA+IT FKLP ++IHTVGP++ FH E+ +L S Y N L++ KA ++ I
Sbjct: 53 -GCMTGEAKITEAFKLPAKYIIHTVGPIYPFHTISENKKLLSSCYINSLNIAKAYKLKSI 111
Query: 133 AFPAISCGVSQ 143
AF IS GV +
Sbjct: 112 AFSCISTGVYK 122
>gi|227529968|ref|ZP_03960017.1| Appr-1-p processing domain protein [Lactobacillus vaginalis ATCC
49540]
gi|227350153|gb|EEJ40444.1| Appr-1-p processing domain protein [Lactobacillus vaginalis ATCC
49540]
Length = 169
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 78/127 (61%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
LK +GDI++ VD AIV+ N LL GG AIH AAGP L AC +
Sbjct: 4 LKAIQGDITQVHVD----AIVNAANTTLLGGGGVDGAIHRAAGPGLYAACLKFH------ 53
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAF 134
CP GEARIT GF+LP +VIHT GP+++ N ED +L ++Y+N L + + N+ + +AF
Sbjct: 54 GCPTGEARITHGFRLPAKYVIHTPGPIWHGGTNDEDELLANSYRNSLQLAEENDCRTVAF 113
Query: 135 PAISCGV 141
P+IS GV
Sbjct: 114 PSISTGV 120
>gi|347753494|ref|YP_004861059.1| Appr-1-p processing domain-containing protein [Bacillus coagulans
36D1]
gi|347586012|gb|AEP02279.1| Appr-1-p processing domain protein [Bacillus coagulans 36D1]
Length = 188
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 89/150 (59%), Gaps = 14/150 (9%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
S KI GDI++ +DAIV+ N LL GG AIH AAGP+L + C ++
Sbjct: 3 SFKIVLGDITK----VKTDAIVNAANTTLLGGGGVDGAIHRAAGPELLEECRKLN----- 53
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIA 133
CP GEA++T G++LP +VIHT GPV+ + E ++L ++Y+N L + ++ ++ +A
Sbjct: 54 -GCPTGEAKMTKGYRLPAKYVIHTPGPVWQGGGHHEAELLENSYQNSLRLAESKGLRTVA 112
Query: 134 FPAISCGVSQIMTHA---IKLQTNCGFLES 160
FP+IS GV A I ++T C FLE+
Sbjct: 113 FPSISTGVYHFPLDAAARIAVRTICTFLET 142
>gi|116051690|ref|YP_789471.1| hypothetical protein PA14_16620 [Pseudomonas aeruginosa UCBPP-PA14]
gi|421173068|ref|ZP_15630823.1| hypothetical protein PACI27_1309 [Pseudomonas aeruginosa CI27]
gi|115586911|gb|ABJ12926.1| putative phophatase [Pseudomonas aeruginosa UCBPP-PA14]
gi|404536739|gb|EKA46375.1| hypothetical protein PACI27_1309 [Pseudomonas aeruginosa CI27]
Length = 173
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 77/129 (59%), Gaps = 11/129 (8%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T +++ +GDI+R VD AIV+ N LL GG AIH AAG +L AC +
Sbjct: 2 TEVRVWQGDITRLAVD----AIVNAANSSLLGGGGVDGAIHRAAGAELVSACRLLHG--- 54
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
C GEA+IT GF+LP +HVIHTVGPV+ N E ++L S Y+ L++ + +
Sbjct: 55 ---CKTGEAKITRGFRLPAAHVIHTVGPVWRGGDNGEAELLASCYRRSLALAEQAGAASV 111
Query: 133 AFPAISCGV 141
AFPAISCG+
Sbjct: 112 AFPAISCGI 120
>gi|34499018|ref|NP_903233.1| hypothetical protein CV_3563 [Chromobacterium violaceum ATCC 12472]
gi|34104868|gb|AAQ61225.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 170
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 75/127 (59%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L+ +GDI+R VD AIV+ N LL GG AIH AAGP L +AC ++
Sbjct: 5 LRCVQGDITRMRVD----AIVNAANSRLLGGGGVDGAIHRAAGPALLEACRRLGG----- 55
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
CP GEAR+T G+ LP +VIHTVGPV+ C +L + Y+N L++ + IAF
Sbjct: 56 -CPTGEARLTEGYLLPARYVIHTVGPVWQGGDCGEPALLAACYRNSLALAARQGVASIAF 114
Query: 135 PAISCGV 141
PAISCGV
Sbjct: 115 PAISCGV 121
>gi|300864438|ref|ZP_07109309.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300337582|emb|CBN54457.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 172
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 81/130 (62%), Gaps = 11/130 (8%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
KT + + + DI++ VD AIV+ NE LL GG AIH+AAG +L K C +
Sbjct: 2 KTKISVIQADITKLEVD----AIVNAANESLLGGGGVDGAIHDAAGRELLKECKTLG--- 54
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
CP GEA+IT G+KLP +VIHTVGP++ + E ++L S Y + L++ K + ++
Sbjct: 55 ---GCPTGEAKITKGYKLPAKYVIHTVGPIWYWGKRGEAELLASCYFSSLNLAKDHKVKT 111
Query: 132 IAFPAISCGV 141
IAFPAISCGV
Sbjct: 112 IAFPAISCGV 121
>gi|224371203|ref|YP_002605367.1| hypothetical protein HRM2_41470 [Desulfobacterium autotrophicum
HRM2]
gi|223693920|gb|ACN17203.1| conserved hypothetical protein [Desulfobacterium autotrophicum
HRM2]
Length = 171
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/127 (48%), Positives = 80/127 (62%), Gaps = 5/127 (3%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
++KI +GDI+ VD AIV+ N +L GG AIH AAGP L +AC ++P +
Sbjct: 3 NIKIVQGDITLAAVD----AIVNAANCGMLGGGGVDGAIHRAAGPKLLEACKKVP-LENG 57
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
+RCP GEARIT L +VIHTVGP + +PE +L SAY+N L + ++ Q IAF
Sbjct: 58 IRCPTGEARITQAGNLKAKYVIHTVGPRYGIDKDPEKLLSSAYQNSLDLALSHGCQSIAF 117
Query: 135 PAISCGV 141
PAISCGV
Sbjct: 118 PAISCGV 124
>gi|386057320|ref|YP_005973842.1| putative phophatase [Pseudomonas aeruginosa M18]
gi|347303626|gb|AEO73740.1| putative phophatase [Pseudomonas aeruginosa M18]
Length = 173
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 77/129 (59%), Gaps = 11/129 (8%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T +++ +GDI+R VD AIV+ N LL GG AIH AAG +L AC +
Sbjct: 2 TEVRVWQGDITRLAVD----AIVNAANSSLLGGGGVDGAIHRAAGAELVAACRLL----- 52
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
C GEA+IT GF+LP +HVIHTVGPV+ N E ++L S Y+ L++ + +
Sbjct: 53 -YGCKTGEAKITRGFRLPAAHVIHTVGPVWRGGDNGEAELLASCYRRSLALAEQAGAASV 111
Query: 133 AFPAISCGV 141
AFPAISCG+
Sbjct: 112 AFPAISCGI 120
>gi|296387800|ref|ZP_06877275.1| putative phophatase [Pseudomonas aeruginosa PAb1]
gi|355639907|ref|ZP_09051452.1| hypothetical protein HMPREF1030_00538 [Pseudomonas sp. 2_1_26]
gi|416878064|ref|ZP_11920191.1| putative phophatase [Pseudomonas aeruginosa 152504]
gi|334838749|gb|EGM17457.1| putative phophatase [Pseudomonas aeruginosa 152504]
gi|354831613|gb|EHF15623.1| hypothetical protein HMPREF1030_00538 [Pseudomonas sp. 2_1_26]
Length = 173
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 77/129 (59%), Gaps = 11/129 (8%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T +++ +GDI+R VD AIV+ N LL GG AIH AAG +L AC +
Sbjct: 2 TEVRVWQGDITRLAVD----AIVNAANSSLLGGGGVDGAIHRAAGAELVAACRLLHG--- 54
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
C GEA+IT GF+LP +HVIHTVGPV+ N E ++L S Y+ L++ + +
Sbjct: 55 ---CKTGEAKITRGFRLPAAHVIHTVGPVWRGGDNGEAELLASCYRRSLALAEQAGATSV 111
Query: 133 AFPAISCGV 141
AFPAISCG+
Sbjct: 112 AFPAISCGI 120
>gi|406838885|ref|ZP_11098479.1| Putative phosphatase [Lactobacillus vini DSM 20605]
Length = 187
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 78/129 (60%), Gaps = 10/129 (7%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
++ + + +GDI++ S DAIV+ N LL GG AIH+AAGP L AC ++
Sbjct: 17 QSEIFLYQGDITKL----SCDAIVNAANSSLLGGGGVDGAIHQAAGPQLLAACRKLHG-- 70
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYI 132
C GEA+ITPGFKLP +VIHTVGP+++ PE +L + Y N L + + ++ +
Sbjct: 71 ----CQTGEAKITPGFKLPARYVIHTVGPIYHTALKPEQLLAACYVNSLDLARQYQLKKV 126
Query: 133 AFPAISCGV 141
+F AIS GV
Sbjct: 127 SFSAISTGV 135
>gi|149924649|ref|ZP_01913001.1| hypothetical protein PPSIR1_17920 [Plesiocystis pacifica SIR-1]
gi|149814468|gb|EDM74057.1| hypothetical protein PPSIR1_17920 [Plesiocystis pacifica SIR-1]
Length = 173
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 77/126 (61%), Gaps = 5/126 (3%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
S+ + +GDI+R S DAIV+ N +L GG AIH AAGP+L AC ++P+
Sbjct: 4 SITLERGDITRV----SCDAIVNAANPKMLGGGGVDGAIHRAAGPELLAACRRVPKVNG- 58
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
+RCP GEARITP F L VIH VGP++ +P+ +L AY + L + A+++ +A
Sbjct: 59 IRCPFGEARITPAFGLDARWVIHAVGPIYARSEDPKGVLARAYASALELAAAHDVTELAC 118
Query: 135 PAISCG 140
PA+S G
Sbjct: 119 PALSTG 124
>gi|224826433|ref|ZP_03699535.1| Appr-1-p processing domain protein [Pseudogulbenkiania ferrooxidans
2002]
gi|224601534|gb|EEG07715.1| Appr-1-p processing domain protein [Pseudogulbenkiania ferrooxidans
2002]
Length = 180
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 78/129 (60%), Gaps = 11/129 (8%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T L++ +GDI++ VD AIV+ N LL GG AIH AAGP+L C +
Sbjct: 8 TVLEVWQGDITQLDVD----AIVNAANSSLLGGGGVDGAIHRAAGPELLAECRTLGG--- 60
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
CP G+AR+T G++LP HVIHTVGPV++ + E ++L S Y+ L + + + +
Sbjct: 61 ---CPTGQARLTQGYRLPARHVIHTVGPVWHGGASGEAELLASCYRTSLQLAAEHGLHSV 117
Query: 133 AFPAISCGV 141
AFPAISCGV
Sbjct: 118 AFPAISCGV 126
>gi|15598889|ref|NP_252383.1| hypothetical protein PA3693 [Pseudomonas aeruginosa PAO1]
gi|218890030|ref|YP_002438894.1| putative phophatase [Pseudomonas aeruginosa LESB58]
gi|254236603|ref|ZP_04929926.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|313109099|ref|ZP_07795071.1| putative phophatase [Pseudomonas aeruginosa 39016]
gi|386067728|ref|YP_005983032.1| hypothetical protein NCGM2_4824 [Pseudomonas aeruginosa NCGM2.S1]
gi|392982583|ref|YP_006481170.1| phophatase [Pseudomonas aeruginosa DK2]
gi|416860156|ref|ZP_11914165.1| putative phophatase [Pseudomonas aeruginosa 138244]
gi|418586072|ref|ZP_13150118.1| putative phophatase [Pseudomonas aeruginosa MPAO1/P1]
gi|418589500|ref|ZP_13153422.1| putative phophatase [Pseudomonas aeruginosa MPAO1/P2]
gi|419754716|ref|ZP_14281074.1| putative phophatase [Pseudomonas aeruginosa PADK2_CF510]
gi|420138108|ref|ZP_14646049.1| hypothetical protein PACIG1_1547 [Pseudomonas aeruginosa CIG1]
gi|421158513|ref|ZP_15617762.1| hypothetical protein PABE173_1373 [Pseudomonas aeruginosa ATCC
25324]
gi|421166071|ref|ZP_15624341.1| hypothetical protein PABE177_1163 [Pseudomonas aeruginosa ATCC
700888]
gi|421518236|ref|ZP_15964910.1| hypothetical protein A161_18195 [Pseudomonas aeruginosa PAO579]
gi|20178167|sp|Q9HXU7.1|Y3693_PSEAE RecName: Full=Macro domain-containing protein PA3693
gi|9949858|gb|AAG07081.1|AE004789_1 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|126168534|gb|EAZ54045.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|218770253|emb|CAW26018.1| putative phophatase [Pseudomonas aeruginosa LESB58]
gi|310881573|gb|EFQ40167.1| putative phophatase [Pseudomonas aeruginosa 39016]
gi|334837748|gb|EGM16497.1| putative phophatase [Pseudomonas aeruginosa 138244]
gi|348036287|dbj|BAK91647.1| hypothetical protein NCGM2_4824 [Pseudomonas aeruginosa NCGM2.S1]
gi|375043746|gb|EHS36362.1| putative phophatase [Pseudomonas aeruginosa MPAO1/P1]
gi|375051734|gb|EHS44200.1| putative phophatase [Pseudomonas aeruginosa MPAO1/P2]
gi|384398534|gb|EIE44939.1| putative phophatase [Pseudomonas aeruginosa PADK2_CF510]
gi|392318088|gb|AFM63468.1| putative phophatase [Pseudomonas aeruginosa DK2]
gi|403249091|gb|EJY62606.1| hypothetical protein PACIG1_1547 [Pseudomonas aeruginosa CIG1]
gi|404347718|gb|EJZ74067.1| hypothetical protein A161_18195 [Pseudomonas aeruginosa PAO579]
gi|404539218|gb|EKA48715.1| hypothetical protein PABE177_1163 [Pseudomonas aeruginosa ATCC
700888]
gi|404549521|gb|EKA58378.1| hypothetical protein PABE173_1373 [Pseudomonas aeruginosa ATCC
25324]
gi|453047300|gb|EME95014.1| phophatase [Pseudomonas aeruginosa PA21_ST175]
Length = 173
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 77/129 (59%), Gaps = 11/129 (8%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T +++ +GDI+R VD AIV+ N LL GG AIH AAG +L AC +
Sbjct: 2 TEVRVWQGDITRLAVD----AIVNAANSSLLGGGGVDGAIHRAAGAELVAACRLLHG--- 54
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
C GEA+IT GF+LP +HVIHTVGPV+ N E ++L S Y+ L++ + +
Sbjct: 55 ---CKTGEAKITRGFRLPAAHVIHTVGPVWRGGDNGEAELLASCYRRSLALAEQAGAASV 111
Query: 133 AFPAISCGV 141
AFPAISCG+
Sbjct: 112 AFPAISCGI 120
>gi|302798027|ref|XP_002980774.1| hypothetical protein SELMODRAFT_113089 [Selaginella moellendorffii]
gi|300151780|gb|EFJ18425.1| hypothetical protein SELMODRAFT_113089 [Selaginella moellendorffii]
Length = 183
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 77/137 (56%), Gaps = 2/137 (1%)
Query: 6 QTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKAC 65
+ S S+ I GDI++W VD ++DAIV+P N+ + G IH+ AGP L AC
Sbjct: 4 EQFKLSDTCSMTIYFGDITKWRVDGATDAIVAPANKKVNAGAAVDGVIHKVAGPRLLSAC 63
Query: 66 YQIPEAQPR-VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVG 124
++P+ P V+C G+A T F LPVS VIH VGPV+ + D L Y + L++
Sbjct: 64 QRLPDVAPHGVKCEVGQAVSTKAFNLPVSRVIHAVGPVYEGRESDAD-LEKTYASALALA 122
Query: 125 KANNIQYIAFPAISCGV 141
I++I FP +SC +
Sbjct: 123 ATEGIKHIVFPPLSCRI 139
>gi|95928248|ref|ZP_01310996.1| Appr-1-p processing [Desulfuromonas acetoxidans DSM 684]
gi|95135519|gb|EAT17170.1| Appr-1-p processing [Desulfuromonas acetoxidans DSM 684]
Length = 181
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 86/148 (58%), Gaps = 14/148 (9%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++I +GDI+R VD AIV+ N LL GG AIH AAGP L + C +
Sbjct: 4 IEIVRGDITRLQVD----AIVNAANTSLLGGGGVDGAIHRAAGPQLLEECRTLGG----- 54
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSA-YKNCLSVGKANNIQYIAF 134
CP GEA++T G+ LP +VIHTVGPV++ E++L +A Y+N L + ++ + IAF
Sbjct: 55 -CPTGEAKMTRGYDLPARYVIHTVGPVWSGGGGNEEMLLAACYRNSLKLAVSHGLSTIAF 113
Query: 135 PAISCGVSQI---MTHAIKLQTNCGFLE 159
PAISCGV + + I ++ C LE
Sbjct: 114 PAISCGVYRFPIEIASEIAVREVCAVLE 141
>gi|385816532|ref|YP_005852923.1| hypothetical protein [Lactobacillus delbrueckii subsp. bulgaricus
2038]
gi|325126569|gb|ADY85899.1| Hypothetical conserved protein [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 166
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 75/127 (59%), Gaps = 10/127 (7%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+L+I +GDI+ VD AIV+ N L GG AIH AAGP L +AC +
Sbjct: 2 NLEIWQGDITTLKVD----AIVNAANRELRGGGGVDGAIHRAAGPKLNEACRALGS---- 53
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C GEA+ITPGF LP ++IHTVGPV++ + +L + Y+N L V K N +Q +AF
Sbjct: 54 --CETGEAKITPGFNLPAKYIIHTVGPVYSGSHSDPLLLAACYRNSLRVAKENGLQSVAF 111
Query: 135 PAISCGV 141
AIS GV
Sbjct: 112 SAISTGV 118
>gi|345863727|ref|ZP_08815935.1| RNase III inhibitor [endosymbiont of Tevnia jerichonana (vent
Tica)]
gi|345878106|ref|ZP_08829832.1| RNase III inhibitor [endosymbiont of Riftia pachyptila (vent Ph05)]
gi|344224848|gb|EGV51225.1| RNase III inhibitor [endosymbiont of Riftia pachyptila (vent Ph05)]
gi|345125053|gb|EGW54925.1| RNase III inhibitor [endosymbiont of Tevnia jerichonana (vent
Tica)]
Length = 171
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 78/127 (61%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++I +GDI++ VD AIV+ N LL GG AIH AAGP+L AC +P
Sbjct: 4 IQIVQGDITQLEVD----AIVNAANSSLLGGGGVDGAIHRAAGPELLAAC------RPLG 53
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
CP GEARITPGF+LP VIHTVGPV+ E + L++ Y+N L + + ++ IAF
Sbjct: 54 GCPTGEARITPGFQLPARWVIHTVGPVWRGGDQGEPERLQACYQNSLQLAREYEVRTIAF 113
Query: 135 PAISCGV 141
PAIS GV
Sbjct: 114 PAISTGV 120
>gi|322417969|ref|YP_004197192.1| Appr-1-p processing protein [Geobacter sp. M18]
gi|320124356|gb|ADW11916.1| Appr-1-p processing domain protein [Geobacter sp. M18]
Length = 172
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 76/130 (58%), Gaps = 11/130 (8%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
+ ++I +GDI+R VD AIV+ N LL GG AIH AAGP+L C +
Sbjct: 2 REKVEIVEGDITRLAVD----AIVNAANSSLLGGGGVDGAIHRAAGPELLAECRTLGG-- 55
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
C G+A+IT G+KLP HVIHTVGPV++ E ++LR+ Y+NC + +
Sbjct: 56 ----CATGDAKITGGYKLPARHVIHTVGPVWHGGSRGEPELLRACYRNCCRIAHEQGLSS 111
Query: 132 IAFPAISCGV 141
IAFPAIS GV
Sbjct: 112 IAFPAISTGV 121
>gi|374298142|ref|YP_005048333.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Clostridium clariflavum DSM 19732]
gi|359827636|gb|AEV70409.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Clostridium clariflavum DSM 19732]
Length = 173
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 75/124 (60%), Gaps = 11/124 (8%)
Query: 18 ISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRC 77
I +GDI++ VD AIV+ N LL GG AIH AAGP+L + C ++ C
Sbjct: 6 IIQGDITKVEVD----AIVNAANNTLLGGGGVDGAIHRAAGPELLEECRKLN------GC 55
Query: 78 PPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAFPA 136
G+A+IT G+KLP +VIHTVGP++ H N E +L S Y+N L + N I+ IAFP+
Sbjct: 56 ETGQAKITKGYKLPAKYVIHTVGPIWRGGHKNEEQLLASCYRNSLQLAAENGIKTIAFPS 115
Query: 137 ISCG 140
IS G
Sbjct: 116 ISTG 119
>gi|315039175|ref|YP_004032743.1| Appr-1-p processing protein [Lactobacillus amylovorus GRL 1112]
gi|312277308|gb|ADQ59948.1| Appr-1-p processing domain protein [Lactobacillus amylovorus GRL
1112]
Length = 167
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 75/127 (59%), Gaps = 10/127 (7%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T +KI +GDI++ +DAIV+ N LL GG AIH AAGP L + C +
Sbjct: 2 TDIKIIQGDITKM----KADAIVNAANNSLLGGGGVDGAIHAAAGPHLLEECMTLH---- 53
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
C G+A+IT G+ LP HVIHTVGPV++ + D+LR+ Y+N L + K ++ I
Sbjct: 54 --GCHTGDAKITLGYDLPAKHVIHTVGPVYSGKSSDCDMLRACYRNSLDLAKKADLHSII 111
Query: 134 FPAISCG 140
FPAIS G
Sbjct: 112 FPAISTG 118
>gi|302818815|ref|XP_002991080.1| hypothetical protein SELMODRAFT_132911 [Selaginella moellendorffii]
gi|300141174|gb|EFJ07888.1| hypothetical protein SELMODRAFT_132911 [Selaginella moellendorffii]
Length = 184
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 76/135 (56%), Gaps = 2/135 (1%)
Query: 6 QTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKAC 65
+ S S+ I GDI++W VD ++DAIV+P N+ + G IH+ AGP L AC
Sbjct: 4 EQFKLSDTCSMTIYFGDITKWRVDGATDAIVAPANKKVNAGAAVDGVIHKVAGPRLLSAC 63
Query: 66 YQIPEAQPR-VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVG 124
++P+ P V+C G+A T F LPVS VIH VGPV+ + D L Y + L++
Sbjct: 64 QRLPDVAPHGVKCEVGQAVSTKAFNLPVSRVIHAVGPVYEGRESDAD-LEKTYASALALA 122
Query: 125 KANNIQYIAFPAISC 139
I++I FP +SC
Sbjct: 123 ATEGIKHIVFPPLSC 137
>gi|315654192|ref|ZP_07907103.1| RNase III regulator YmdB, partial [Lactobacillus iners ATCC 55195]
gi|315488467|gb|EFU78118.1| RNase III regulator YmdB [Lactobacillus iners ATCC 55195]
Length = 144
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 80/130 (61%), Gaps = 12/130 (9%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ K DI+R VD AIV+ N+ LL GG AIH+AAGP+L++ C ++
Sbjct: 1 MRVVKEDITRLKVD----AIVNAANKTLLGGGGVDGAIHQAAGPELKEVCRKLNG----- 51
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED--ILRSAYKNCLSVGKANNIQYIA 133
C GEA+IT FKLP ++IHTVGP++ FH E+ +L S Y N L++ KA ++ IA
Sbjct: 52 -CMTGEAKITEAFKLPAKYIIHTVGPIYPFHTISENKKLLSSCYINSLNIAKAYKLKSIA 110
Query: 134 FPAISCGVSQ 143
F IS GV +
Sbjct: 111 FSCISTGVYK 120
>gi|325957648|ref|YP_004293060.1| Appr-1-p processing domain-containing protein [Lactobacillus
acidophilus 30SC]
gi|385818351|ref|YP_005854741.1| Appr-1-p processing protein [Lactobacillus amylovorus GRL1118]
gi|325334213|gb|ADZ08121.1| Appr-1-p processing domain protein [Lactobacillus acidophilus 30SC]
gi|327184289|gb|AEA32736.1| Appr-1-p processing domain-containing protein [Lactobacillus
amylovorus GRL1118]
Length = 167
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 75/127 (59%), Gaps = 10/127 (7%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T +KI +GDI++ +DAIV+ N LL GG AIH AAGP L + C +
Sbjct: 2 TDIKIIQGDITKM----KADAIVNAANNSLLGGGGVDGAIHAAAGPHLLEECMTLH---- 53
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
C G+A+IT G+ LP HVIHTVGPV++ + D+LR+ Y+N L + K ++ I
Sbjct: 54 --GCHTGDAKITLGYDLPAKHVIHTVGPVYSGKSSDCDMLRACYRNSLDLAKKADLHSII 111
Query: 134 FPAISCG 140
FPAIS G
Sbjct: 112 FPAISTG 118
>gi|340029179|ref|ZP_08665242.1| appr-1-p processing domain-containing protein [Paracoccus sp. TRP]
Length = 166
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 72/123 (58%), Gaps = 11/123 (8%)
Query: 20 KGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPP 79
+GDI+R VD AIV+ N LL GG AIH AAGP L + C + CP
Sbjct: 7 QGDITRLAVD----AIVNAANSSLLGGGGVDGAIHRAAGPRLLEECRSLGG------CPT 56
Query: 80 GEARITPGFKLPVSHVIHTVGPVFNFHCNPEDI-LRSAYKNCLSVGKANNIQYIAFPAIS 138
GEARIT G+ LP +VIH VGPV+ ED+ L SAY+N L++ + + IAFPAIS
Sbjct: 57 GEARITQGYDLPARYVIHAVGPVWQGGGAGEDVLLASAYRNSLALAHQHGVVSIAFPAIS 116
Query: 139 CGV 141
GV
Sbjct: 117 TGV 119
>gi|148658282|ref|YP_001278487.1| appr-1-p processing domain-containing protein [Roseiflexus sp.
RS-1]
gi|148570392|gb|ABQ92537.1| Appr-1-p processing domain protein [Roseiflexus sp. RS-1]
Length = 181
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 78/126 (61%), Gaps = 10/126 (7%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L++ +G+I V++ DAIV+ NE L GG + AIH AAGP+L C +I
Sbjct: 10 LELIRGNI----VEQDVDAIVNAANETLAPGGGVSGAIHRAAGPELADECARIGG----- 60
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFP 135
CP GEARIT G++L HVIH VGP ++ + ++L SAY++ L + ++ +Q IAFP
Sbjct: 61 -CPTGEARITAGYRLKARHVIHAVGPRYSGNPRDAELLASAYRSALMLAASHGLQSIAFP 119
Query: 136 AISCGV 141
+IS G+
Sbjct: 120 SISTGI 125
>gi|220931652|ref|YP_002508560.1| Appr-1-p processing protein [Halothermothrix orenii H 168]
gi|219992962|gb|ACL69565.1| Appr-1-p processing domain protein [Halothermothrix orenii H 168]
Length = 188
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 80/128 (62%), Gaps = 7/128 (5%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
+ L + GDI++ V+ AIV+ N L+ GG AIH A GPD+ + C +I + +
Sbjct: 9 SQLILDTGDITQERVE----AIVNAANSSLMGGGGVDGAIHRAGGPDILEECKEIRKKKG 64
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNF-HCNPEDILRSAYKNCLSVGKANNIQYI 132
++ PPG+A IT G KL +VIHTVGPV++ N ++L+ AY+NCL + + N I+ I
Sbjct: 65 KL--PPGQAVITTGGKLKARYVIHTVGPVWHGGQKNEGEVLKQAYRNCLDLARKNGIRSI 122
Query: 133 AFPAISCG 140
AFP+IS G
Sbjct: 123 AFPSISTG 130
>gi|158520685|ref|YP_001528555.1| appr-1-p processing domain-containing protein [Desulfococcus
oleovorans Hxd3]
gi|158509511|gb|ABW66478.1| Appr-1-p processing domain protein [Desulfococcus oleovorans Hxd3]
Length = 195
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 88/163 (53%), Gaps = 16/163 (9%)
Query: 3 FKVQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQ 62
+ +T+ + LK+ +GDI+ VD AIV+ N+ LL GG AIH AAGP+L
Sbjct: 16 YNSKTMEKEILSRLKVWQGDITTLEVD----AIVNAANKTLLGGGGVDGAIHRAAGPELL 71
Query: 63 KACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNP--EDILRSAYKNC 120
C + C G+A+IT G++LP VIHTVGPV++ NP +L Y N
Sbjct: 72 AECKTLGG------CDTGQAKITRGYRLPAKFVIHTVGPVYS-RSNPGVAKLLAGCYTNS 124
Query: 121 LSVGKANNIQYIAFPAISCGVSQI-MTHA--IKLQTNCGFLES 160
L + K + +AFPA+SCGV M A I L T C FLE+
Sbjct: 125 LKLAKDQGLASVAFPAVSCGVYGYPMKEACRIALDTVCDFLET 167
>gi|418273408|ref|ZP_12889036.1| DNA/RNA unwinding protein [Lactobacillus plantarum subsp. plantarum
NC8]
gi|376011022|gb|EHS84346.1| DNA/RNA unwinding protein [Lactobacillus plantarum subsp. plantarum
NC8]
Length = 172
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 77/127 (60%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+K+ GDI++ VD AIV+ N LL GG AIH AAGP+L AC +P
Sbjct: 4 IKVIHGDITKMTVD----AIVNAANTSLLGGGGVDGAIHRAAGPELLAAC------RPLH 53
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C GEA+ITPGF+LP +VIHT GPV+ N +L ++Y+N L++ N+ Q +AF
Sbjct: 54 GCATGEAKITPGFRLPAKYVIHTPGPVWQGGQHNELQLLANSYRNSLNLAAENHCQTVAF 113
Query: 135 PAISCGV 141
P+IS GV
Sbjct: 114 PSISTGV 120
>gi|423139535|ref|ZP_17127173.1| RNase III regulator YmdB [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
gi|379052089|gb|EHY69980.1| RNase III regulator YmdB [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
Length = 179
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 76/129 (58%), Gaps = 7/129 (5%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
+ L++ +GDI++ VD AIV+ N L+ GG AIH AAGP L AC I Q
Sbjct: 3 SRLQVIQGDITQLSVD----AIVNAANASLMGGGGVDGAIHRAAGPALLDACKLIRRQQG 58
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
CP G A ITP KL VIHTVGPV+ + E ++L AY+NCL + +AN + I
Sbjct: 59 E--CPTGHAVITPAGKLSAKAVIHTVGPVWRGGEHQEAELLEEAYRNCLLLAEANRFRSI 116
Query: 133 AFPAISCGV 141
AFPAIS GV
Sbjct: 117 AFPAISTGV 125
>gi|332798581|ref|YP_004460080.1| Appr-1-p processing domain-containing protein [Tepidanaerobacter
acetatoxydans Re1]
gi|438001561|ref|YP_007271304.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Tepidanaerobacter acetatoxydans Re1]
gi|332696316|gb|AEE90773.1| Appr-1-p processing domain protein [Tepidanaerobacter acetatoxydans
Re1]
gi|432178355|emb|CCP25328.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Tepidanaerobacter acetatoxydans Re1]
Length = 171
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 77/126 (61%), Gaps = 11/126 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ GDI++ VD AIV+ N LL GG AIH AAGP+L + C ++
Sbjct: 4 IQVVLGDITKIEVD----AIVNAANNTLLGGGGVDGAIHRAAGPELLEECRKLN------ 53
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C GEA+IT G+KLP +VIHTVGPV+ + N +++L S Y+N L + N I+ IAF
Sbjct: 54 GCKTGEAKITKGYKLPAKYVIHTVGPVWQGGNANEDELLASCYRNSLELAAKNGIKTIAF 113
Query: 135 PAISCG 140
P+IS G
Sbjct: 114 PSISTG 119
>gi|218281536|ref|ZP_03487965.1| hypothetical protein EUBIFOR_00530 [Eubacterium biforme DSM 3989]
gi|218217325|gb|EEC90863.1| hypothetical protein EUBIFOR_00530 [Eubacterium biforme DSM 3989]
Length = 296
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 10/129 (7%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
++ +K+ KGDI+ + D IV+ NE LL GG AIH AAGP L + C +
Sbjct: 126 ESEIKVVKGDITTF----DGDCIVNAANESLLGGGGVDGAIHRAAGPMLLEECKLLN--- 178
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYI 132
C G+A+IT G+ L +VIHTVGP+++ E +LR Y N L++ + +I I
Sbjct: 179 ---GCQTGQAKITKGYDLKAKYVIHTVGPMYSGKHEDEHMLRDCYWNSLTLARKYDIHTI 235
Query: 133 AFPAISCGV 141
AFPAISCGV
Sbjct: 236 AFPAISCGV 244
>gi|107103207|ref|ZP_01367125.1| hypothetical protein PaerPA_01004276 [Pseudomonas aeruginosa PACS2]
gi|421152498|ref|ZP_15612078.1| hypothetical protein PABE171_1424 [Pseudomonas aeruginosa ATCC
14886]
gi|404525258|gb|EKA35534.1| hypothetical protein PABE171_1424 [Pseudomonas aeruginosa ATCC
14886]
Length = 173
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 76/129 (58%), Gaps = 11/129 (8%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T +++ +GDI+R VD AIV+ N LL GG AIH AAG +L AC +
Sbjct: 2 TEVRVWQGDITRLAVD----AIVNAANSSLLGGGGVDGAIHRAAGAELVAACRLLHG--- 54
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
C GEA+IT GF+LP +HVIHTVGPV+ N E ++L S Y+ L + + +
Sbjct: 55 ---CKTGEAKITRGFRLPAAHVIHTVGPVWRGGDNGEAELLASCYRRSLVLAEQAGAASV 111
Query: 133 AFPAISCGV 141
AFPAISCG+
Sbjct: 112 AFPAISCGI 120
>gi|386727302|ref|YP_006193628.1| hypothetical protein B2K_35040 [Paenibacillus mucilaginosus K02]
gi|384094427|gb|AFH65863.1| hypothetical protein B2K_35040 [Paenibacillus mucilaginosus K02]
Length = 189
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 75/128 (58%), Gaps = 7/128 (5%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
S ++ +GDI+R +DAIV+ N LL GG AIH A G + C +I Q
Sbjct: 12 SFEVMRGDITRV----KADAIVNAANSSLLGGGGVDGAIHRAGGRAILDDCIRIRSRQGG 67
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIA 133
CPPGEA IT G KLP SHVIHTVGPV+N E ++LR Y++ L++ + ++ IA
Sbjct: 68 --CPPGEAVITTGGKLPASHVIHTVGPVWNGGTQGEAEVLRRCYRSVLALASEHGVRSIA 125
Query: 134 FPAISCGV 141
FP I G+
Sbjct: 126 FPNIGTGI 133
>gi|398385323|ref|ZP_10543346.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Sphingobium sp. AP49]
gi|397720667|gb|EJK81221.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Sphingobium sp. AP49]
Length = 178
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 75/129 (58%), Gaps = 11/129 (8%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T + GDI+R VD AIV+ N LL GG AIH AAGPDL C I
Sbjct: 6 TRWDVVTGDITRCAVD----AIVNAANNSLLGGGGVDGAIHRAAGPDLLAECRGIGC--- 58
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
CP GEARIT G++LP +VIHTVGPV+ E D+L S Y + LS+ + + ++ +
Sbjct: 59 ---CPTGEARITRGYRLPARYVIHTVGPVWQGGNQGERDLLASCYSHSLSLARHHGLRRV 115
Query: 133 AFPAISCGV 141
AFPAIS GV
Sbjct: 116 AFPAISTGV 124
>gi|403070624|ref|ZP_10911956.1| hypothetical protein ONdio_13661 [Oceanobacillus sp. Ndiop]
Length = 184
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 88/152 (57%), Gaps = 9/152 (5%)
Query: 12 TKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEA 71
+L + GDI+ ++ ++AIV+ N +L GG AIH AAG DL + C +I +A
Sbjct: 6 NDNTLALMVGDIT----EQETEAIVNAANGLLQGGGGVDGAIHRAAGKDLLEECQKIRQA 61
Query: 72 QPR-VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCN-PEDILRSAYKNCLSVGKANNI 129
+ + P GE IT G+ LP + VIHTVGPV+N + + ED+L + Y+N L + K NI
Sbjct: 62 ELKGEELPTGEVIITAGYNLPANFVIHTVGPVWNENPDMEEDLLANCYRNALLLAKVRNI 121
Query: 130 QYIAFPAISCGVSQI---MTHAIKLQTNCGFL 158
+ I+FP+IS GV + I L+T FL
Sbjct: 122 KSISFPSISTGVYRYPIDQASEIALETIVNFL 153
>gi|337751603|ref|YP_004645765.1| hypothetical protein KNP414_07391 [Paenibacillus mucilaginosus
KNP414]
gi|336302792|gb|AEI45895.1| hypothetical protein KNP414_07391 [Paenibacillus mucilaginosus
KNP414]
Length = 189
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 75/128 (58%), Gaps = 7/128 (5%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
S ++ +GDI+R +DAIV+ N LL GG AIH A G + C +I Q
Sbjct: 12 SFEVMRGDITRV----KADAIVNAANSSLLGGGGVDGAIHRAGGRAILDDCIRIRSRQGG 67
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIA 133
CPPGEA IT G KLP SHVIHTVGPV+N E ++LR Y++ L++ + ++ IA
Sbjct: 68 --CPPGEAVITTGGKLPASHVIHTVGPVWNGGTQGEAEVLRRCYRSVLTLAAEHGVRSIA 125
Query: 134 FPAISCGV 141
FP I G+
Sbjct: 126 FPNIGTGI 133
>gi|189426615|ref|YP_001953792.1| Appr-1-p processing protein [Geobacter lovleyi SZ]
gi|189422874|gb|ACD97272.1| Appr-1-p processing domain protein [Geobacter lovleyi SZ]
Length = 176
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 76/127 (59%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++I +GDI+ VD AIV+ N LL GG AIH+AAGP L C +
Sbjct: 6 IEIIQGDITTLAVD----AIVNAANSTLLGGGGVDGAIHKAAGPGLLNECATLGG----- 56
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
CP GEARIT G+ LP VIHTVGPV+ E ++L ++Y+N L + + + I+ IAF
Sbjct: 57 -CPTGEARITKGYNLPARFVIHTVGPVWTDGAKGEPELLTASYRNSLELARRHGIRSIAF 115
Query: 135 PAISCGV 141
PAISCGV
Sbjct: 116 PAISCGV 122
>gi|379724558|ref|YP_005316689.1| hypothetical protein PM3016_6949 [Paenibacillus mucilaginosus 3016]
gi|378573230|gb|AFC33540.1| hypothetical protein PM3016_6949 [Paenibacillus mucilaginosus 3016]
Length = 189
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 75/128 (58%), Gaps = 7/128 (5%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
S ++ +GDI+R +DAIV+ N LL GG AIH A G + C +I Q
Sbjct: 12 SFEVMRGDITRV----KADAIVNAANSSLLGGGGVDGAIHRAGGRAILDDCIRIRSRQGG 67
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIA 133
CPPGEA IT G KLP SHVIHTVGPV+N E ++LR Y++ L++ + ++ IA
Sbjct: 68 --CPPGEAVITTGGKLPASHVIHTVGPVWNGGTQGEAEVLRRCYRSVLALAAEHGVRSIA 125
Query: 134 FPAISCGV 141
FP I G+
Sbjct: 126 FPNIGTGI 133
>gi|440225635|ref|YP_007332726.1| hypothetical protein RTCIAT899_CH03835 [Rhizobium tropici CIAT 899]
gi|440037146|gb|AGB70180.1| hypothetical protein RTCIAT899_CH03835 [Rhizobium tropici CIAT 899]
Length = 187
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 77/130 (59%), Gaps = 11/130 (8%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
+T ++ GDI++ VD AIV+ N LL GG AIH AAGPDL C +
Sbjct: 16 RTRFTVALGDITKLPVD----AIVNAANSSLLGGGGVDGAIHRAAGPDLLAECRSLNG-- 69
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFN-FHCNPEDILRSAYKNCLSVGKANNIQY 131
C G+A+IT G++LP HVIHTVGPV+N + E++L Y+N LS+ + ++
Sbjct: 70 ----CRTGQAKITMGYRLPARHVIHTVGPVWNGGDHDEEELLAGCYRNSLSLARERALKT 125
Query: 132 IAFPAISCGV 141
IAFPAIS G+
Sbjct: 126 IAFPAISTGI 135
>gi|300812491|ref|ZP_07092916.1| macro domain protein [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|300496518|gb|EFK31615.1| macro domain protein [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
Length = 166
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 75/127 (59%), Gaps = 10/127 (7%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+L+I +GDI+ VD AIV+ N L GG AIH AAGP+L +AC +
Sbjct: 2 NLEIWQGDITTLKVD----AIVNAANRELRGGGGVDGAIHRAAGPELNEACRALGS---- 53
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C GEA+ITPGF LP ++IHTVGPV++ + +L + Y+N L V K N + +AF
Sbjct: 54 --CETGEAKITPGFNLPAKYIIHTVGPVYSGSHSDPLLLAACYRNSLRVAKENGLHSVAF 111
Query: 135 PAISCGV 141
AIS GV
Sbjct: 112 SAISTGV 118
>gi|285019062|ref|YP_003376773.1| appr-1-p processing enzyme domain protein [Xanthomonas albilineans
GPE PC73]
gi|283474280|emb|CBA16781.1| putative appr-1-p processing enzyme domain protein [Xanthomonas
albilineans GPE PC73]
Length = 186
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 78/134 (58%), Gaps = 5/134 (3%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+ I +GDI+ VD AIV+ TNE LL G AIH AAGP+L + C ++PE +P
Sbjct: 2 KIDIWQGDITHLDVD----AIVNATNESLLGGDGVDDAIHRAAGPELLEECRRLPELKPG 57
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
VRCP GE T G++L +V+HTVGP++ + N +L + Y L + + ++ +A
Sbjct: 58 VRCPAGEVHATAGYRLKARYVLHTVGPMWRDGQRNEPALLANCYWRALRLAEQMGLESVA 117
Query: 134 FPAISCGVSQIMTH 147
FP ISCG + H
Sbjct: 118 FPPISCGAAGYPLH 131
>gi|404497855|ref|YP_006721961.1| O-acetyl-ADP-ribose deacetylase [Geobacter metallireducens GS-15]
gi|418067707|ref|ZP_12705042.1| Appr-1-p processing domain protein [Geobacter metallireducens RCH3]
gi|78195455|gb|ABB33222.1| O-acetyl-ADP-ribose deacetylase [Geobacter metallireducens GS-15]
gi|373558306|gb|EHP84655.1| Appr-1-p processing domain protein [Geobacter metallireducens RCH3]
Length = 173
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 74/130 (56%), Gaps = 11/130 (8%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
+ ++I GDI++ VD IV+ N LL GG AIH AAGP+L C +
Sbjct: 2 REKIEIIPGDITKLAVD----TIVNAANNSLLGGGGVDGAIHRAAGPELLAECRTLNG-- 55
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
C G+A+IT G++LP HVIHTVGPV++ E ++LRS Y+ C V +
Sbjct: 56 ----CATGDAKITKGYRLPAKHVIHTVGPVWHGGAKGEQELLRSCYRRCFEVAHGAGLTS 111
Query: 132 IAFPAISCGV 141
IAFPAISCGV
Sbjct: 112 IAFPAISCGV 121
>gi|365856735|ref|ZP_09396746.1| macro domain protein [Acetobacteraceae bacterium AT-5844]
gi|363717546|gb|EHM00915.1| macro domain protein [Acetobacteraceae bacterium AT-5844]
Length = 161
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 75/127 (59%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++ +GDI+R VD AIV+ N L GG AIH AAGP+L +AC +
Sbjct: 1 MRAERGDITRLAVD----AIVNAANSALAPGGGVCGAIHAAAGPELARACAALGG----- 51
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
CP GEARITPGF+LP HVIH VGPV++ E ++L Y+ L++ + + IAF
Sbjct: 52 -CPTGEARITPGFRLPARHVIHAVGPVWHGGGRGEAELLAGCYRASLALLRQAGGRSIAF 110
Query: 135 PAISCGV 141
PAIS G+
Sbjct: 111 PAISTGI 117
>gi|400596975|gb|EJP64719.1| macro domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 215
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 76/133 (57%), Gaps = 10/133 (7%)
Query: 9 SFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQI 68
S S + +GDI++ VD AIV+ N+ LL GG AIH AAGP L C+ +
Sbjct: 35 SASANQRAALIRGDITKLQVD----AIVNAANKSLLGGGGVDGAIHAAAGPGLLDECHTL 90
Query: 69 PEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANN 128
CP GE+RIT G++LP +HVIHTVGPV++ E +LRS Y++ L +
Sbjct: 91 GG------CPTGESRITKGYRLPAAHVIHTVGPVYSGKSVSEPLLRSCYRSSLELAAQKG 144
Query: 129 IQYIAFPAISCGV 141
++ +AF IS GV
Sbjct: 145 LRSVAFSGISTGV 157
>gi|313124681|ref|YP_004034940.1| phosphatase, histone macroh2a1 family [Lactobacillus delbrueckii
subsp. bulgaricus ND02]
gi|312281244|gb|ADQ61963.1| Predicted phosphatase, histone macroH2A1 family [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
Length = 166
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 75/127 (59%), Gaps = 10/127 (7%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+L+I +GDI+ VD AIV+ N L GG AIH AAGP+L +AC +
Sbjct: 2 NLEIWQGDITTLKVD----AIVNAANRELQGGGGVDGAIHRAAGPELNEACRALGS---- 53
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C GEA+ITPGF LP ++IHTVGPV++ + +L + Y+N L V K N + +AF
Sbjct: 54 --CETGEAKITPGFNLPAKYIIHTVGPVYSGSHSDPLLLAACYRNSLRVAKENGLHSVAF 111
Query: 135 PAISCGV 141
AIS GV
Sbjct: 112 SAISTGV 118
>gi|261415847|ref|YP_003249530.1| Appr-1-p processing protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|385790732|ref|YP_005821855.1| Appr-1-p processing enzyme family protein [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|261372303|gb|ACX75048.1| Appr-1-p processing domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302325614|gb|ADL24815.1| Appr-1-p processing enzyme family protein [Fibrobacter succinogenes
subsp. succinogenes S85]
Length = 167
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 79/129 (61%), Gaps = 13/129 (10%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
++++ +GDI++ VD AIV+ N LL GG AIH AAGP+L +AC P
Sbjct: 3 NIEVIQGDITKLKVD----AIVNAANCSLLGGGGVDGAIHRAAGPELLQACI------PL 52
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVF--NFHCNPEDILRSAYKNCLSVGKANNIQYI 132
C G A+ITPGFKLP VIHT GPV+ H P +L S YK+CL++ + NN + +
Sbjct: 53 KGCETGHAKITPGFKLPAKFVIHTPGPVYRDGQHGEPA-LLESCYKSCLALAEENNCETV 111
Query: 133 AFPAISCGV 141
AFPAIS GV
Sbjct: 112 AFPAISTGV 120
>gi|320354228|ref|YP_004195567.1| Appr-1-p processing protein [Desulfobulbus propionicus DSM 2032]
gi|320122730|gb|ADW18276.1| Appr-1-p processing domain protein [Desulfobulbus propionicus DSM
2032]
Length = 169
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 65/109 (59%), Gaps = 7/109 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ NE LL GG AIH AAGP L + C I C G+A IT G+ LP
Sbjct: 15 DAIVNAANETLLGGGGVDGAIHRAAGPQLLEECRAIGG------CKTGQAVITKGYDLPA 68
Query: 93 SHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCG 140
HVIHTVGP++ N E +L S Y+NCL + NNI IAFPAISCG
Sbjct: 69 KHVIHTVGPIWRGGNNNEPALLASCYRNCLELAVRNNIDSIAFPAISCG 117
>gi|421179143|ref|ZP_15636739.1| hypothetical protein PAE2_1188 [Pseudomonas aeruginosa E2]
gi|424939448|ref|ZP_18355211.1| putative phosphatase [Pseudomonas aeruginosa NCMG1179]
gi|346055894|dbj|GAA15777.1| putative phosphatase [Pseudomonas aeruginosa NCMG1179]
gi|404547386|gb|EKA56384.1| hypothetical protein PAE2_1188 [Pseudomonas aeruginosa E2]
Length = 173
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 76/129 (58%), Gaps = 11/129 (8%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T +++ +GDI+R VD AIV+ N LL GG AIH AAG +L AC +
Sbjct: 2 TEVRVWQGDITRLAVD----AIVNAANSSLLGGGGVDGAIHRAAGAELVAACRLLHG--- 54
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
C GEA+IT GF+LP +HVIHTVGPV+ N E ++L S Y+ L + + +
Sbjct: 55 ---CKTGEAKITRGFRLPAAHVIHTVGPVWRGGDNGEPELLASCYRRSLVLAEQAGAASV 111
Query: 133 AFPAISCGV 141
AFPAISCG+
Sbjct: 112 AFPAISCGI 120
>gi|384109643|ref|ZP_10010513.1| putative phosphatase [Treponema sp. JC4]
gi|383868816|gb|EID84445.1| putative phosphatase [Treponema sp. JC4]
Length = 219
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 76/133 (57%), Gaps = 12/133 (9%)
Query: 11 STKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPE 70
ST +KI KGDI+ + DAIV+ N LL GG AIH AAGP+L C +
Sbjct: 48 STMGKIKIIKGDITTL----ACDAIVNAANSSLLGGGGVDGAIHYAAGPELLAECRTLH- 102
Query: 71 AQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFH--CNPEDILRSAYKNCLSVGKANN 128
C GEA+IT G+KLP VIHTVGPV+ H E+ L S Y+N L++ K N
Sbjct: 103 -----GCRTGEAKITKGYKLPSRFVIHTVGPVYFEHTPVEAEEFLTSCYENSLNLAKENG 157
Query: 129 IQYIAFPAISCGV 141
++ IAFP IS GV
Sbjct: 158 LKTIAFPLISAGV 170
>gi|406027836|ref|YP_006726668.1| hypothetical protein LBUCD034_2104 [Lactobacillus buchneri CD034]
gi|405126325|gb|AFS01086.1| macro domain protein [Lactobacillus buchneri CD034]
Length = 164
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 87/160 (54%), Gaps = 14/160 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
K+ KGDI+ VD AIV+ N L GG AIH AAGP+L +AC ++
Sbjct: 4 FKLIKGDITTMQVD----AIVNAANTALSGGGGVDGAIHRAAGPELDEACRKLNG----- 54
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
CP GEA++TPGF+LP VIHT GP++ H N +LR++Y N L N+ Q +AF
Sbjct: 55 -CPTGEAKVTPGFRLPAKFVIHTPGPIWRGGHNNEPQLLRNSYVNSLKRAVENHCQTVAF 113
Query: 135 PAISCGVSQI-MTHAIKLQTNCGFLESFWVELSAKVTTYD 173
P+IS GV + A K+ + + +F L + +D
Sbjct: 114 PSISTGVYDFPLDKAAKIAIDA--IRTFDAPLDVTMVCFD 151
>gi|373464706|ref|ZP_09556226.1| macro domain protein [Lactobacillus kisonensis F0435]
gi|371761992|gb|EHO50561.1| macro domain protein [Lactobacillus kisonensis F0435]
Length = 171
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 88/161 (54%), Gaps = 14/161 (8%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+ K+ KGDI++ VD AIV+ N L GG AIH AAGP L +AC ++
Sbjct: 8 NFKLIKGDITKMKVD----AIVNAANTALSGGGGVDGAIHRAAGPQLDEACRKLNG---- 59
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHC-NPEDILRSAYKNCLSVGKANNIQYIA 133
CP GEA++TPGF LP +VIHT GP+++ N +LR++Y N L NN + +A
Sbjct: 60 --CPTGEAKMTPGFDLPAKYVIHTPGPIWHGGSRNEAQLLRNSYVNSLKRAVENNCRTVA 117
Query: 134 FPAISCGVSQI-MTHAIKLQTNCGFLESFWVELSAKVTTYD 173
FP+IS GV + A K+ G ++ F L + +D
Sbjct: 118 FPSISTGVYDYPLDQAAKIAI--GAIKEFDAPLEVTMVCFD 156
>gi|409397852|ref|ZP_11248710.1| appr-1-p processing domain-containing protein [Pseudomonas sp.
Chol1]
gi|409117591|gb|EKM94018.1| appr-1-p processing domain-containing protein [Pseudomonas sp.
Chol1]
Length = 167
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 78/128 (60%), Gaps = 11/128 (8%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+L+ +GDI+ VD A+V+ N LL GG AIH AAGP L++ C ++
Sbjct: 2 TLRAWRGDITALAVD----AVVNAANSSLLGGGGVDGAIHRAAGPQLREYCSKLGG---- 53
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIA 133
C GEAR++PGF LP ++IHTVGP++ E + L + Y+N L++ + + +Q +A
Sbjct: 54 --CAVGEARLSPGFGLPARYIIHTVGPIWRGGAQGEPEQLAACYRNSLALAEQHRLQSLA 111
Query: 134 FPAISCGV 141
FPAISCG+
Sbjct: 112 FPAISCGI 119
>gi|422844849|ref|ZP_16891559.1| RNase III regulator YmdB [Lactobacillus delbrueckii subsp. lactis
DSM 20072]
gi|325684979|gb|EGD27120.1| RNase III regulator YmdB [Lactobacillus delbrueckii subsp. lactis
DSM 20072]
Length = 166
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 75/127 (59%), Gaps = 10/127 (7%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+L+I +GDI+ VD AIV+ N L GG AIH AAGP+L +AC +
Sbjct: 2 NLEIWQGDITTLKVD----AIVNAANRELRGGGGVDGAIHRAAGPELNEACRALGS---- 53
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C GEA+ITPGF LP ++IHTVGP+++ + +L + Y+N L V K N + +AF
Sbjct: 54 --CETGEAKITPGFNLPAKYIIHTVGPIYSGSHSDPLLLAACYRNSLRVAKENGLHSVAF 111
Query: 135 PAISCGV 141
AIS GV
Sbjct: 112 SAISTGV 118
>gi|254557882|ref|YP_003064299.1| hypothetical protein JDM1_2716 [Lactobacillus plantarum JDM1]
gi|308181964|ref|YP_003926092.1| hypothetical protein LPST_C2787 [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|380033912|ref|YP_004890903.1| DNA/RNA unwinding protein [Lactobacillus plantarum WCFS1]
gi|448819569|ref|YP_007412731.1| Macro domain-containing protein [Lactobacillus plantarum ZJ316]
gi|38258745|sp|Q88SK6.1|Y3408_LACPL RecName: Full=Macro domain-containing protein lp_3408
gi|254046809|gb|ACT63602.1| conserved hypothetical protein [Lactobacillus plantarum JDM1]
gi|308047455|gb|ADN99998.1| hypothetical protein LPST_C2787 [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|342243155|emb|CCC80389.1| DNA/RNA unwinding protein [Lactobacillus plantarum WCFS1]
gi|448273066|gb|AGE37585.1| Macro domain-containing protein [Lactobacillus plantarum ZJ316]
Length = 172
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 76/127 (59%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+K+ GDI++ VD AIV+ N LL GG AIH AAGP L AC +P
Sbjct: 4 IKVIHGDITKMTVD----AIVNAANTSLLGGGGVDGAIHRAAGPALLAAC------RPLH 53
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C GEA+ITPGF+LP +VIHT GPV+ N +L ++Y+N L++ N+ Q +AF
Sbjct: 54 GCATGEAKITPGFRLPAKYVIHTPGPVWQGGQHNELQLLANSYRNSLNLAAENHCQTVAF 113
Query: 135 PAISCGV 141
P+IS GV
Sbjct: 114 PSISTGV 120
>gi|300769301|ref|ZP_07079188.1| RNase III regulator YmdB [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|300493075|gb|EFK28256.1| RNase III regulator YmdB [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
Length = 172
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 76/127 (59%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+K+ GDI++ VD AIV+ N LL GG AIH AAGP L AC +P
Sbjct: 4 IKVIHGDITKMTVD----AIVNAANTSLLGGGGVDGAIHRAAGPALLAAC------RPLH 53
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C GEA+ITPGF+LP +VIHT GPV+ N +L ++Y+N L++ N+ Q +AF
Sbjct: 54 GCATGEAKITPGFRLPAKYVIHTPGPVWQGGQHNELQLLANSYRNSLNLAAENHCQTVAF 113
Query: 135 PAISCGV 141
P+IS GV
Sbjct: 114 PSISTGV 120
>gi|39995633|ref|NP_951584.1| O-acetyl-ADP-ribose deacetylase [Geobacter sulfurreducens PCA]
gi|409911091|ref|YP_006889556.1| O-acetyl-ADP-ribose deacetylase [Geobacter sulfurreducens KN400]
gi|39982396|gb|AAR33857.1| O-acetyl-ADP-ribose deacetylase [Geobacter sulfurreducens PCA]
gi|298504655|gb|ADI83378.1| O-acetyl-ADP-ribose deacetylase [Geobacter sulfurreducens KN400]
Length = 173
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 74/130 (56%), Gaps = 11/130 (8%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K ++I GDI+ VD AIV+ N LL GG AIH AAGP+L C +
Sbjct: 2 KGKIEIIPGDITTLAVD----AIVNAANNSLLGGGGVDGAIHRAAGPELLAECRTLNG-- 55
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
C G+A+IT G++LP HVIHTVGPV++ E D+LRS Y+ V ++
Sbjct: 56 ----CATGDAKITAGYRLPAKHVIHTVGPVWHGGARGEPDLLRSCYRRSFEVAHGAGLRS 111
Query: 132 IAFPAISCGV 141
IAFPAISCGV
Sbjct: 112 IAFPAISCGV 121
>gi|395244061|ref|ZP_10421037.1| RNase III regulator YmdB [Lactobacillus hominis CRBIP 24.179]
gi|394483669|emb|CCI82045.1| RNase III regulator YmdB [Lactobacillus hominis CRBIP 24.179]
Length = 167
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 77/128 (60%), Gaps = 12/128 (9%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
LK+ DI++ VD AIV+ N+ LL GG AIH+AAG L +AC Q+
Sbjct: 2 LKVVCEDITKLKVD----AIVNAANKSLLGGGGVDGAIHKAAGALLLQACKQLNG----- 52
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED--ILRSAYKNCLSVGKANNIQYIA 133
C G+A+IT G+ LP ++IHTVGP++ FH ED +LR Y+N L + K N++ IA
Sbjct: 53 -CQTGQAKITHGYNLPAKYIIHTVGPIYRFHDQAEDEQLLRYCYRNSLDLAKKYNLKTIA 111
Query: 134 FPAISCGV 141
F +IS GV
Sbjct: 112 FSSISTGV 119
>gi|423113743|ref|ZP_17101434.1| hypothetical protein HMPREF9689_01491 [Klebsiella oxytoca 10-5245]
gi|376387388|gb|EHT00098.1| hypothetical protein HMPREF9689_01491 [Klebsiella oxytoca 10-5245]
Length = 184
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 78/145 (53%), Gaps = 10/145 (6%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPG 80
GDI+ VD IV+ N LL GG AIH AAGPDL AC + + Q CPPG
Sbjct: 10 GDITTLAVD----VIVNAANPSLLGGGGVDGAIHRAAGPDLLAACKVVRQQQGE--CPPG 63
Query: 81 EARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISC 139
A IT LP S VIH VGP+++ E ++L AYKN L + ANN + IAFPAIS
Sbjct: 64 HAVITTAGNLPASAVIHAVGPIWHGGDRQEAELLADAYKNSLQLASANNYRSIAFPAIST 123
Query: 140 GVSQIMTHA---IKLQTNCGFLESF 161
GV HA I + T FL +
Sbjct: 124 GVYGYPKHAAAEIAINTVNAFLTRY 148
>gi|302786336|ref|XP_002974939.1| hypothetical protein SELMODRAFT_174583 [Selaginella moellendorffii]
gi|300157098|gb|EFJ23724.1| hypothetical protein SELMODRAFT_174583 [Selaginella moellendorffii]
Length = 282
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 75/133 (56%), Gaps = 3/133 (2%)
Query: 10 FSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIP 69
S ++ I KGD+ W +D +DA+V+P N+ G IH AGP L C ++P
Sbjct: 98 LSDTCTMVIWKGDLGLWYIDGQNDAVVAPANKRCNAGYGVDGTIHRFAGPRLLDTCQKLP 157
Query: 70 EAQPR-VRCPPGEARITPGFKLPVSHVIHTVGPVF--NFHCNPEDILRSAYKNCLSVGKA 126
+ P+ ++C G+A IT GF L S VIH VGPV+ E +L AY L++ +
Sbjct: 158 DVAPQGIKCEVGQAVITRGFNLQASRVIHAVGPVYEEKNRDESEKMLTKAYVAALNLATS 217
Query: 127 NNIQYIAFPAISC 139
N I+YIAFPA+SC
Sbjct: 218 NGIKYIAFPALSC 230
>gi|104774734|ref|YP_619714.1| hypothetical protein Ldb2092 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116514865|ref|YP_813771.1| histone macroH2A1 family phosphatase [Lactobacillus delbrueckii
subsp. bulgaricus ATCC BAA-365]
gi|418029790|ref|ZP_12668314.1| RNA-directed RNA polymerase [Lactobacillus delbrueckii subsp.
bulgaricus CNCM I-1632]
gi|418036734|ref|ZP_12675132.1| RNA-directed RNA polymerase [Lactobacillus delbrueckii subsp.
bulgaricus CNCM I-1519]
gi|103423815|emb|CAI98830.1| Conserved hypothetical protein [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116094180|gb|ABJ59333.1| Predicted phosphatase, histone macroH2A1 family [Lactobacillus
delbrueckii subsp. bulgaricus ATCC BAA-365]
gi|354686752|gb|EHE86882.1| RNA-directed RNA polymerase [Lactobacillus delbrueckii subsp.
bulgaricus CNCM I-1519]
gi|354688998|gb|EHE89015.1| RNA-directed RNA polymerase [Lactobacillus delbrueckii subsp.
bulgaricus CNCM I-1632]
Length = 166
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 74/127 (58%), Gaps = 10/127 (7%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+L+I +GDI+ VD AIV+ N L GG AIH AAGP L +AC +
Sbjct: 2 NLEIWQGDITTLKVD----AIVNAANRELRGGGGVDGAIHRAAGPKLNEACRALGS---- 53
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C GEA+ITPGF LP ++IHTVGPV++ + +L + Y+N L V K N + +AF
Sbjct: 54 --CETGEAKITPGFNLPAKYIIHTVGPVYSGSHSDPLLLAACYRNSLRVAKENGLHSVAF 111
Query: 135 PAISCGV 141
AIS GV
Sbjct: 112 SAISTGV 118
>gi|385811318|ref|YP_005847714.1| phosphatase [Ignavibacterium album JCM 16511]
gi|383803366|gb|AFH50446.1| Putative phosphatase [Ignavibacterium album JCM 16511]
Length = 180
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 77/130 (59%), Gaps = 11/130 (8%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K + + KGDI++ VD AIV+ N LL GG AIH AAG +L + ++
Sbjct: 2 KAIISLYKGDITKLNVD----AIVNAANRSLLGGGGVDGAIHRAAGSELLEFNRKLG--- 54
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQY 131
C GEA+I+PGFKLP +IHTVGPV+ +CN + +L + Y N L + NNI+
Sbjct: 55 ---GCETGEAKISPGFKLPAKFIIHTVGPVWQGGNCNEDKLLENCYLNSLRLTVKNNIKT 111
Query: 132 IAFPAISCGV 141
IAFPAIS GV
Sbjct: 112 IAFPAISTGV 121
>gi|125974548|ref|YP_001038458.1| Appr-1-p processing protein [Clostridium thermocellum ATCC 27405]
gi|256004093|ref|ZP_05429078.1| Appr-1-p processing domain protein [Clostridium thermocellum DSM
2360]
gi|281419070|ref|ZP_06250087.1| Appr-1-p processing domain protein [Clostridium thermocellum JW20]
gi|385779985|ref|YP_005689150.1| Appr-1-p processing protein [Clostridium thermocellum DSM 1313]
gi|419721330|ref|ZP_14248494.1| Appr-1-p processing domain protein [Clostridium thermocellum AD2]
gi|419726892|ref|ZP_14253912.1| Appr-1-p processing domain protein [Clostridium thermocellum YS]
gi|125714773|gb|ABN53265.1| Appr-1-p processing domain protein [Clostridium thermocellum ATCC
27405]
gi|255992016|gb|EEU02113.1| Appr-1-p processing domain protein [Clostridium thermocellum DSM
2360]
gi|281407219|gb|EFB37480.1| Appr-1-p processing domain protein [Clostridium thermocellum JW20]
gi|316941665|gb|ADU75699.1| Appr-1-p processing domain protein [Clostridium thermocellum DSM
1313]
gi|380769857|gb|EIC03757.1| Appr-1-p processing domain protein [Clostridium thermocellum YS]
gi|380782500|gb|EIC12134.1| Appr-1-p processing domain protein [Clostridium thermocellum AD2]
Length = 175
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 75/126 (59%), Gaps = 11/126 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ I +GDI++ +DAIV+ N LL GG AIH AAGP+L + C ++
Sbjct: 4 IHIIQGDITKI----EADAIVNAANRTLLGGGGVDGAIHRAAGPELLEECRKLN------ 53
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAF 134
C GEA+IT G+KLP +VIHTVGPV+ ED +L S Y+N L + N I+ IAF
Sbjct: 54 GCETGEAKITKGYKLPAKYVIHTVGPVWKGGDKNEDQLLASCYRNSLKLAVENGIKTIAF 113
Query: 135 PAISCG 140
P+IS G
Sbjct: 114 PSISTG 119
>gi|416422090|ref|ZP_11689994.1| hypothetical protein SEEM315_12958 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|416431609|ref|ZP_11695763.1| hypothetical protein SEEM971_17952 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|416441412|ref|ZP_11701624.1| hypothetical protein SEEM973_13010 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|416443702|ref|ZP_11703178.1| hypothetical protein SEEM974_04711 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|416452690|ref|ZP_11709185.1| hypothetical protein SEEM201_15320 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|416459118|ref|ZP_11713627.1| hypothetical protein SEEM202_01615 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|416467609|ref|ZP_11717521.1| hypothetical protein SEEM954_01988 [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|416481789|ref|ZP_11723470.1| hypothetical protein SEEM054_18295 [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|416500223|ref|ZP_11731294.1| hypothetical protein SEEM965_12257 [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|416505484|ref|ZP_11733918.1| hypothetical protein SEEM031_22125 [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|416523399|ref|ZP_11741076.1| hypothetical protein SEEM710_19931 [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|416545581|ref|ZP_11753375.1| hypothetical protein SEEM19N_16122 [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|416558255|ref|ZP_11760131.1| hypothetical protein SEEM42N_14029 [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|416566152|ref|ZP_11763706.1| hypothetical protein SEEM41H_03913 [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|416578272|ref|ZP_11770392.1| hypothetical protein SEEM801_11417 [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|416582208|ref|ZP_11772482.1| hypothetical protein SEEM507_18184 [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|416589097|ref|ZP_11776797.1| hypothetical protein SEEM877_10822 [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|416599248|ref|ZP_11783482.1| hypothetical protein SEEM867_07351 [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|416604747|ref|ZP_11786368.1| hypothetical protein SEEM180_06387 [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|416612203|ref|ZP_11791345.1| hypothetical protein SEEM600_11237 [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|416618890|ref|ZP_11794740.1| hypothetical protein SEEM581_02801 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|416631576|ref|ZP_11801201.1| hypothetical protein SEEM501_03137 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|416640539|ref|ZP_11805049.1| hypothetical protein SEEM460_02976 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|416650315|ref|ZP_11810423.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|416663582|ref|ZP_11816248.1| hypothetical protein SEEM6152_19428 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|416666085|ref|ZP_11817236.1| hypothetical protein SEEM0077_05649 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|416676604|ref|ZP_11821892.1| hypothetical protein SEEM0047_04349 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|416697352|ref|ZP_11828191.1| hypothetical protein SEEM0055_17485 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|416707331|ref|ZP_11832429.1| hypothetical protein SEEM0052_12692 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|416714629|ref|ZP_11837947.1| hypothetical protein SEEM3312_02644 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|416716407|ref|ZP_11838754.1| hypothetical protein SEEM5258_12254 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|416725309|ref|ZP_11845679.1| hypothetical protein SEEM1156_20089 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|416731888|ref|ZP_11849574.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|416738678|ref|ZP_11853436.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|416749677|ref|ZP_11859364.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|416756066|ref|ZP_11862424.1| hypothetical protein SEEM8284_12147 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|416761794|ref|ZP_11865844.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|416770657|ref|ZP_11871996.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|418482356|ref|ZP_13051375.1| hypothetical protein SEEM906_16879 [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|418490569|ref|ZP_13057112.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|418495333|ref|ZP_13061775.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|418499044|ref|ZP_13065454.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|418502069|ref|ZP_13068445.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|418507568|ref|ZP_13073888.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|418526923|ref|ZP_13092882.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
gi|322616517|gb|EFY13426.1| hypothetical protein SEEM315_12958 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322619769|gb|EFY16644.1| hypothetical protein SEEM971_17952 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322622536|gb|EFY19381.1| hypothetical protein SEEM973_13010 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322629687|gb|EFY26462.1| hypothetical protein SEEM974_04711 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322632593|gb|EFY29339.1| hypothetical protein SEEM201_15320 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322636912|gb|EFY33615.1| hypothetical protein SEEM202_01615 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322641550|gb|EFY38188.1| hypothetical protein SEEM954_01988 [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322644039|gb|EFY40585.1| hypothetical protein SEEM054_18295 [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322653985|gb|EFY50308.1| hypothetical protein SEEM965_12257 [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322658517|gb|EFY54779.1| hypothetical protein SEEM19N_16122 [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322663375|gb|EFY59577.1| hypothetical protein SEEM801_11417 [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322670109|gb|EFY66249.1| hypothetical protein SEEM507_18184 [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322674826|gb|EFY70917.1| hypothetical protein SEEM877_10822 [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322676703|gb|EFY72770.1| hypothetical protein SEEM867_07351 [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322682625|gb|EFY78644.1| hypothetical protein SEEM180_06387 [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322686622|gb|EFY82601.1| hypothetical protein SEEM600_11237 [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323195736|gb|EFZ80912.1| hypothetical protein SEEM581_02801 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323198114|gb|EFZ83228.1| hypothetical protein SEEM501_03137 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323203144|gb|EFZ88174.1| hypothetical protein SEEM460_02976 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323209652|gb|EFZ94581.1| hypothetical protein SEEM6152_19428 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323217893|gb|EGA02608.1| hypothetical protein SEEM0077_05649 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323222180|gb|EGA06564.1| hypothetical protein SEEM0047_04349 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323224951|gb|EGA09209.1| hypothetical protein SEEM0055_17485 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323229695|gb|EGA13818.1| hypothetical protein SEEM0052_12692 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323232920|gb|EGA17016.1| hypothetical protein SEEM3312_02644 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323240655|gb|EGA24697.1| hypothetical protein SEEM5258_12254 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323242968|gb|EGA26989.1| hypothetical protein SEEM1156_20089 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323247660|gb|EGA31605.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323252661|gb|EGA36499.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323255702|gb|EGA39454.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|323261739|gb|EGA45311.1| hypothetical protein SEEM8284_12147 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323266909|gb|EGA50394.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|323269951|gb|EGA53400.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|363550135|gb|EHL34464.1| hypothetical protein SEEM710_19931 [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|363556418|gb|EHL40633.1| hypothetical protein SEEM031_22125 [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|363577307|gb|EHL61132.1| hypothetical protein SEEM42N_14029 [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|363579721|gb|EHL63497.1| hypothetical protein SEEM41H_03913 [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|366059189|gb|EHN23463.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|366064042|gb|EHN28252.1| hypothetical protein SEEM906_16879 [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|366065930|gb|EHN30111.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|366072587|gb|EHN36677.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|366076516|gb|EHN40554.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|366081089|gb|EHN45041.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|366828498|gb|EHN55385.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|372205174|gb|EHP18699.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
Length = 179
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 77/129 (59%), Gaps = 7/129 (5%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
+ L++ +GDI++ VD AIV+ N L+ GG AIH AAGP L AC I + Q
Sbjct: 3 SRLRVIQGDITQLSVD----AIVNAANASLMGGGGVDGAIHRAAGPALLDACKLIRQQQG 58
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
C G A ITP KL VIHTVGPV+ + E ++L AY+NCL + +AN+ + I
Sbjct: 59 E--CQTGHAVITPAGKLSAKAVIHTVGPVWRGGEHQEAELLEEAYRNCLLLAEANHFRSI 116
Query: 133 AFPAISCGV 141
AFPAIS GV
Sbjct: 117 AFPAISTGV 125
>gi|254242388|ref|ZP_04935710.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|451987726|ref|ZP_21935878.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Pseudomonas aeruginosa 18A]
gi|126195766|gb|EAZ59829.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|451754485|emb|CCQ88401.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Pseudomonas aeruginosa 18A]
Length = 173
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 76/129 (58%), Gaps = 11/129 (8%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T +++ +GDI+R VD AIV+ N LL GG AIH AAG +L AC +
Sbjct: 2 TEVRVWQGDITRLAVD----AIVNAANSSLLGGGGVDGAIHRAAGAELVAACRLLHG--- 54
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
C GEA+IT GF+L +HVIHTVGPV+ N E ++L S Y+ L++ + +
Sbjct: 55 ---CKTGEAKITRGFRLSAAHVIHTVGPVWRGGDNGEAELLASCYRRSLALAEQAGAASV 111
Query: 133 AFPAISCGV 141
AFPAISCG+
Sbjct: 112 AFPAISCGI 120
>gi|119386346|ref|YP_917401.1| appr-1-p processing domain-containing protein [Paracoccus
denitrificans PD1222]
gi|119376941|gb|ABL71705.1| Appr-1-p processing domain protein [Paracoccus denitrificans
PD1222]
Length = 166
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 77/129 (59%), Gaps = 13/129 (10%)
Query: 16 LKIS--KGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
++IS +GDI+R VD AIV+ N LL GG AIH AAGP L + C +
Sbjct: 1 MRISTRQGDITRLAVD----AIVNAANRTLLGGGGVDGAIHRAAGPLLLEECRTLGG--- 53
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYI 132
CP GEARIT G+ LP +VIH VGPV+ ED +L AY++ L + +A+++ I
Sbjct: 54 ---CPTGEARITGGYDLPARYVIHAVGPVWQGGMAGEDALLAGAYRHSLLLAQAHDLARI 110
Query: 133 AFPAISCGV 141
AFPAIS G+
Sbjct: 111 AFPAISTGI 119
>gi|415886673|ref|ZP_11548453.1| hypothetical protein MGA3_15046 [Bacillus methanolicus MGA3]
gi|387587360|gb|EIJ79683.1| hypothetical protein MGA3_15046 [Bacillus methanolicus MGA3]
Length = 185
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 89/151 (58%), Gaps = 9/151 (5%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQI-PEAQ 72
+L++ GDI++ +++DAIV+ N LL GG AIH AAGP+L + C +I E
Sbjct: 6 NTLELILGDITK----QTTDAIVNAANGTLLGGGGVDGAIHRAAGPELLQECRRIRKEVL 61
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
P GEA IT GF+LP +VIHTVGPV+ + E ++L + Y+N L++ ++
Sbjct: 62 NGKELPTGEAVITDGFQLPAKYVIHTVGPVWRGNLEREGELLSNCYQNSLNLAAEKKLKS 121
Query: 132 IAFPAISCGVSQI---MTHAIKLQTNCGFLE 159
I+FP+IS GV + + I L+T FL+
Sbjct: 122 ISFPSISTGVYRFPEELASVIALKTIINFLK 152
>gi|204930899|ref|ZP_03221772.1| protein YmdB [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|416527632|ref|ZP_11743407.1| hypothetical protein SEEM010_21254 [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|416535489|ref|ZP_11747743.1| hypothetical protein SEEM030_07683 [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|416551080|ref|ZP_11756335.1| hypothetical protein SEEM29N_00115 [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|417357249|ref|ZP_12132481.1| hypothetical protein LTSEGIV_1548 [Salmonella enterica subsp.
enterica serovar Give str. S5-487]
gi|452120690|ref|YP_007470938.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
gi|204320358|gb|EDZ05562.1| protein YmdB [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|353594355|gb|EHC51894.1| hypothetical protein LTSEGIV_1548 [Salmonella enterica subsp.
enterica serovar Give str. S5-487]
gi|363555479|gb|EHL39705.1| hypothetical protein SEEM010_21254 [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|363565697|gb|EHL49721.1| hypothetical protein SEEM030_07683 [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|363567161|gb|EHL51162.1| hypothetical protein SEEM29N_00115 [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|451909694|gb|AGF81500.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
Length = 179
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 78/129 (60%), Gaps = 7/129 (5%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
+ L++ +GDI++ VD AIV+ N L+ GG AIH AAGP L AC I + Q
Sbjct: 3 SRLQVIQGDITQLSVD----AIVNAANASLMGGGGVDGAIHRAAGPALLDACKLIRQQQG 58
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
C G A ITP KL VIHTVGPV+ + E ++L +AY+NCL + +AN+ + I
Sbjct: 59 E--CQTGHAVITPAGKLSAKAVIHTVGPVWRGGEHQEAELLEAAYRNCLLLAEANHFRSI 116
Query: 133 AFPAISCGV 141
AFPAIS GV
Sbjct: 117 AFPAISTGV 125
>gi|366052228|ref|ZP_09449950.1| appr-1-p processing domain-containing protein [Lactobacillus
suebicus KCTC 3549]
Length = 171
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 89/151 (58%), Gaps = 14/151 (9%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T++K+ KGDI+ VD AIV+ N LL GG AIH AAGP+L A ++ AQ
Sbjct: 2 TNIKVIKGDITTMHVD----AIVNAANTTLLGGGGVDGAIHRAAGPELLAATMKLHGAQT 57
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFN-FHCNPEDILRSAYKNCLSVGKANNIQYI 132
GEA+IT GF+LP +VIHT GP+++ + N +L ++Y N L++ + NN +
Sbjct: 58 ------GEAKITAGFRLPAKYVIHTPGPIWHGGNQNEAQLLHNSYFNSLTLAEQNNCHTV 111
Query: 133 AFPAISCGVSQI-MTHAIKLQTNC--GFLES 160
AFP+IS GV ++ A K+ T FLE+
Sbjct: 112 AFPSISTGVFHFPLSQAAKIATETLRDFLET 142
>gi|294495768|ref|YP_003542261.1| Appr-1-p processing domain protein [Methanohalophilus mahii DSM
5219]
gi|292666767|gb|ADE36616.1| Appr-1-p processing domain protein [Methanohalophilus mahii DSM
5219]
Length = 173
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 75/129 (58%), Gaps = 11/129 (8%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K +KI KGDI+ ++ D IV+ N LL GG AIH+AAGP L + C +
Sbjct: 3 KQIIKIIKGDIT----EQKVDVIVNAANNSLLGGGGVDGAIHKAAGPKLLEECRALN--- 55
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQY 131
CP GEA+IT G+ LP VIHTVGPV++ N ED +L Y+NCL + I+
Sbjct: 56 ---GCPTGEAKITHGYDLPAKWVIHTVGPVWHGGNNDEDKMLAKCYRNCLKLAAEKGIKT 112
Query: 132 IAFPAISCG 140
IAFP+IS G
Sbjct: 113 IAFPSISTG 121
>gi|16760024|ref|NP_455641.1| hypothetical protein STY1184 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|16502318|emb|CAD08271.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29137835|gb|AAO69396.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
Length = 186
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 77/129 (59%), Gaps = 7/129 (5%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
+ L++ +GDI++ VD AIV+ N L+ GG AIH AAGP L AC I + Q
Sbjct: 10 SRLQVIQGDITQLSVD----AIVNAANASLMGGGGVDGAIHRAAGPALLDACKLIRQQQG 65
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
C G A ITP KL VIHTVGPV+ + E ++L AY+NCL + +AN+ + I
Sbjct: 66 E--CQTGHAVITPAGKLSAKAVIHTVGPVWRGGEHQEAELLEEAYRNCLLLAEANHFRSI 123
Query: 133 AFPAISCGV 141
AFPAIS GV
Sbjct: 124 AFPAISTGV 132
>gi|161614635|ref|YP_001588600.1| hypothetical protein SPAB_02385 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|168244740|ref|ZP_02669672.1| protein YmdB [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|168264066|ref|ZP_02686039.1| protein YmdB [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|194443183|ref|YP_002040400.1| hypothetical protein SNSL254_A1243 [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194449140|ref|YP_002045145.1| hypothetical protein SeHA_C1258 [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|238911033|ref|ZP_04654870.1| hypothetical protein SentesTe_07837 [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|386591011|ref|YP_006087411.1| Macro domain, possibly ADP-ribose binding module [Salmonella
enterica subsp. enterica serovar Heidelberg str. B182]
gi|417364881|ref|ZP_12137691.1| hypothetical protein LTSEHVI_1813 [Salmonella enterica subsp.
enterica serovar Hvittingfoss str. A4-620]
gi|418513619|ref|ZP_13079847.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Pomona str. ATCC 10729]
gi|418789746|ref|ZP_13345532.1| hypothetical protein SEEN447_02453 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|418795600|ref|ZP_13351301.1| hypothetical protein SEEN449_12585 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|418798337|ref|ZP_13354014.1| hypothetical protein SEEN567_14581 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|418808686|ref|ZP_13364239.1| hypothetical protein SEEN550_03215 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|418812842|ref|ZP_13368363.1| hypothetical protein SEEN513_04792 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|418817075|ref|ZP_13372563.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21538]
gi|418820517|ref|ZP_13375950.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22425]
gi|418827036|ref|ZP_13382200.1| hypothetical protein SEEN462_05957 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
gi|418832945|ref|ZP_13387879.1| hypothetical protein SEEN486_07683 [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|418836238|ref|ZP_13391125.1| hypothetical protein SEEN543_15063 [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|418839652|ref|ZP_13394486.1| hypothetical protein SEEN554_06060 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|418845463|ref|ZP_13400247.1| hypothetical protein SEEN443_01953 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|418848205|ref|ZP_13402944.1| hypothetical protein SEEN978_08719 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|418855607|ref|ZP_13410263.1| hypothetical protein SEEN593_05424 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|418858623|ref|ZP_13413237.1| hypothetical protein SEEN470_02765 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|418863844|ref|ZP_13418380.1| hypothetical protein SEEN536_14961 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|418868783|ref|ZP_13423224.1| hypothetical protein SEEN176_03294 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|419729396|ref|ZP_14256354.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|419736304|ref|ZP_14263155.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|419737656|ref|ZP_14264428.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|419746233|ref|ZP_14272832.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|419750770|ref|ZP_14277216.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|421569434|ref|ZP_16015137.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|421573616|ref|ZP_16019251.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|421578638|ref|ZP_16024212.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|421582485|ref|ZP_16028021.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|421883135|ref|ZP_16314376.1| hypothetical protein SS209_00316 [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|334351232|sp|B4T2X8.1|YMDB_SALNS RecName: Full=O-acetyl-ADP-ribose deacetylase; AltName:
Full=Regulator of RNase III activity
gi|161363999|gb|ABX67767.1| hypothetical protein SPAB_02385 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194401846|gb|ACF62068.1| protein YmdB [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|194407444|gb|ACF67663.1| protein YmdB [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|205336420|gb|EDZ23184.1| protein YmdB [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|205347349|gb|EDZ33980.1| protein YmdB [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|353595946|gb|EHC53062.1| hypothetical protein LTSEHVI_1813 [Salmonella enterica subsp.
enterica serovar Hvittingfoss str. A4-620]
gi|366081465|gb|EHN45409.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Pomona str. ATCC 10729]
gi|379987248|emb|CCF86649.1| hypothetical protein SS209_00316 [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|381292443|gb|EIC33646.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|381296970|gb|EIC38069.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|381304130|gb|EIC45140.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|381304178|gb|EIC45185.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|381305770|gb|EIC46679.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|383798055|gb|AFH45137.1| Macro domain, possibly ADP-ribose binding module [Salmonella
enterica subsp. enterica serovar Heidelberg str. B182]
gi|392758128|gb|EJA15003.1| hypothetical protein SEEN449_12585 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|392760091|gb|EJA16931.1| hypothetical protein SEEN447_02453 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|392766994|gb|EJA23766.1| hypothetical protein SEEN567_14581 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|392774068|gb|EJA30763.1| hypothetical protein SEEN513_04792 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|392775369|gb|EJA32061.1| hypothetical protein SEEN550_03215 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|392789243|gb|EJA45763.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21538]
gi|392792786|gb|EJA49240.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22425]
gi|392797015|gb|EJA53343.1| hypothetical protein SEEN486_07683 [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|392802064|gb|EJA58284.1| hypothetical protein SEEN543_15063 [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|392802168|gb|EJA58387.1| hypothetical protein SEEN462_05957 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
gi|392812529|gb|EJA68518.1| hypothetical protein SEEN554_06060 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|392812836|gb|EJA68812.1| hypothetical protein SEEN443_01953 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|392821665|gb|EJA77489.1| hypothetical protein SEEN593_05424 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|392823517|gb|EJA79313.1| hypothetical protein SEEN978_08719 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|392831693|gb|EJA87320.1| hypothetical protein SEEN536_14961 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|392832594|gb|EJA88214.1| hypothetical protein SEEN470_02765 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|392837473|gb|EJA93043.1| hypothetical protein SEEN176_03294 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|402524151|gb|EJW31456.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|402527276|gb|EJW34539.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|402527462|gb|EJW34724.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|402532952|gb|EJW40137.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
Length = 179
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 77/129 (59%), Gaps = 7/129 (5%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
+ L++ +GDI++ VD AIV+ N L+ GG AIH AAGP L AC I + Q
Sbjct: 3 SRLQVIQGDITQLSVD----AIVNAANASLMGGGGVDGAIHRAAGPALLDACKLIRQQQG 58
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
C G A ITP KL VIHTVGPV+ + E ++L AY+NCL + +AN+ + I
Sbjct: 59 E--CQTGHAVITPAGKLSAKAVIHTVGPVWRGGEHQEAELLEEAYRNCLLLAEANHFRSI 116
Query: 133 AFPAISCGV 141
AFPAIS GV
Sbjct: 117 AFPAISTGV 125
>gi|168822583|ref|ZP_02834583.1| protein YmdB [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205341022|gb|EDZ27786.1| protein YmdB [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
Length = 179
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 77/129 (59%), Gaps = 7/129 (5%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
+ L++ +GDI++ VD AIV+ N L+ GG AIH AAGP L AC I + Q
Sbjct: 3 SRLQVIQGDITQLSVD----AIVNAANASLMGGGGVDGAIHRAAGPALLDACKLIRQQQG 58
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
C G A ITP KL VIHTVGPV+ + E ++L AY+NCL + +AN+ + I
Sbjct: 59 E--CQTGHAVITPAGKLSAKAVIHTVGPVWRGGEHQEAELLEEAYRNCLLLAEANHFRSI 116
Query: 133 AFPAISCGV 141
AFPAIS GV
Sbjct: 117 AFPAISTGV 125
>gi|16764503|ref|NP_460118.1| hypothetical protein STM1147 [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|167553071|ref|ZP_02346821.1| protein YmdB [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|167994006|ref|ZP_02575098.1| protein YmdB [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168234067|ref|ZP_02659125.1| protein YmdB [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|168467092|ref|ZP_02700934.1| protein YmdB [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|194469514|ref|ZP_03075498.1| protein YmdB [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|197265963|ref|ZP_03166037.1| protein YmdB [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|198245367|ref|YP_002215991.1| hypothetical protein SeD_A2226 [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200389778|ref|ZP_03216389.1| protein YmdB [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|207857345|ref|YP_002243996.1| hypothetical protein SEN1901 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|213024676|ref|ZP_03339123.1| hypothetical protein Salmonelentericaenterica_20201 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
gi|213052365|ref|ZP_03345243.1| hypothetical protein Salmoneentericaenterica_05196 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213427732|ref|ZP_03360482.1| hypothetical protein SentesTyphi_20380 [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213621336|ref|ZP_03374119.1| hypothetical protein SentesTyp_29012 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
gi|213648866|ref|ZP_03378919.1| hypothetical protein SentesTy_17238 [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213855353|ref|ZP_03383593.1| hypothetical protein SentesT_15332 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|289828609|ref|ZP_06546434.1| hypothetical protein Salmonellentericaenterica_19186 [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
gi|374980143|ref|ZP_09721473.1| Macro domain, possibly ADP-ribose binding module [Salmonella
enterica subsp. enterica serovar Typhimurium str.
TN061786]
gi|375119473|ref|ZP_09764640.1| Appr-1-p processing domain containing protein [Salmonella enterica
subsp. enterica serovar Dublin str. SD3246]
gi|375123944|ref|ZP_09769108.1| protein YmdB [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|378444580|ref|YP_005232212.1| hypothetical protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|378449538|ref|YP_005236897.1| hypothetical protein STM14_1313 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|378699040|ref|YP_005180997.1| hypothetical protein SL1344_1084 [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|378954687|ref|YP_005212174.1| hypothetical protein SPUL_0946 [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|378959939|ref|YP_005217425.1| hypothetical protein STBHUCCB_18830 [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|378983706|ref|YP_005246861.1| hypothetical protein STMDT12_C11650 [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|378988491|ref|YP_005251655.1| hypothetical protein STMUK_1115 [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|379700317|ref|YP_005242045.1| Macro domain-containing protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|383495870|ref|YP_005396559.1| hypothetical protein UMN798_1193 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|409994524|ref|NP_805547.2| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|418761375|ref|ZP_13317520.1| hypothetical protein SEEN185_02221 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|418768299|ref|ZP_13324349.1| hypothetical protein SEEN199_20685 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|418769871|ref|ZP_13325898.1| hypothetical protein SEEN539_10393 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|418775889|ref|ZP_13331838.1| hypothetical protein SEEN953_11682 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|418780231|ref|ZP_13336120.1| hypothetical protein SEEN188_01807 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|418786409|ref|ZP_13342224.1| hypothetical protein SEEN559_12066 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|418802531|ref|ZP_13358158.1| hypothetical protein SEEN202_08004 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|419788471|ref|ZP_14314158.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Newport str. Levine 1]
gi|419791229|ref|ZP_14316883.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Newport str. Levine 15]
gi|421358361|ref|ZP_15808659.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|421364375|ref|ZP_15814607.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|421366837|ref|ZP_15817039.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|421373342|ref|ZP_15823482.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|421377273|ref|ZP_15827372.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|421381772|ref|ZP_15831827.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|421385453|ref|ZP_15835475.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|421390219|ref|ZP_15840194.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|421393479|ref|ZP_15843423.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|421398474|ref|ZP_15848382.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|421404284|ref|ZP_15854128.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|421409796|ref|ZP_15859586.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|421413521|ref|ZP_15863275.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|421418832|ref|ZP_15868533.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|421422509|ref|ZP_15872177.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|421426254|ref|ZP_15875882.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|421432995|ref|ZP_15882563.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|421435001|ref|ZP_15884547.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|421442107|ref|ZP_15891567.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|421444399|ref|ZP_15893829.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|421448294|ref|ZP_15897689.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|422030295|ref|ZP_16376502.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|427631723|ref|ZP_18946300.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|427654836|ref|ZP_18951057.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|427660470|ref|ZP_18955964.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|427666021|ref|ZP_18960735.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|436623689|ref|ZP_20514866.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22704]
gi|436659534|ref|ZP_20517090.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE30663]
gi|436802571|ref|ZP_20525456.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|436809260|ref|ZP_20528640.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|436814985|ref|ZP_20532536.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|436844408|ref|ZP_20538166.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|436854261|ref|ZP_20543895.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|436857342|ref|ZP_20545862.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|436864514|ref|ZP_20550481.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|436873922|ref|ZP_20556646.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|436877881|ref|ZP_20558736.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|436888579|ref|ZP_20564908.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|436895638|ref|ZP_20568394.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|436901520|ref|ZP_20572430.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|436912441|ref|ZP_20578270.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|436922373|ref|ZP_20584598.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|436926889|ref|ZP_20586715.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|436936391|ref|ZP_20591831.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|436943582|ref|ZP_20596528.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|436950931|ref|ZP_20599986.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|436961745|ref|ZP_20605119.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|436970663|ref|ZP_20609056.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|436982177|ref|ZP_20613673.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|436994816|ref|ZP_20619084.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|437001690|ref|ZP_20620969.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|437020119|ref|ZP_20627270.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|437033822|ref|ZP_20632706.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|437045521|ref|ZP_20637819.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|437053734|ref|ZP_20642533.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|437058912|ref|ZP_20645759.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|437070265|ref|ZP_20651443.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|437076601|ref|ZP_20654964.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|437081036|ref|ZP_20657488.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|437091801|ref|ZP_20663401.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|437111726|ref|ZP_20668312.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|437122858|ref|ZP_20672662.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|437127450|ref|ZP_20674772.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|437138957|ref|ZP_20681439.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|437145813|ref|ZP_20685720.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|437156682|ref|ZP_20692218.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|437159150|ref|ZP_20693664.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|437166186|ref|ZP_20697971.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|437178827|ref|ZP_20704945.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|437183521|ref|ZP_20707814.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|437230759|ref|ZP_20713375.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13183-1]
gi|437258623|ref|ZP_20716543.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|437268193|ref|ZP_20721663.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|437281610|ref|ZP_20728696.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|437286276|ref|ZP_20730056.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|437312111|ref|ZP_20736219.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|437321814|ref|ZP_20738745.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|437340843|ref|ZP_20744481.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|437370226|ref|ZP_20749158.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|437431967|ref|ZP_20756185.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|437442194|ref|ZP_20757771.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|437467776|ref|ZP_20764524.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|437481291|ref|ZP_20768823.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|437497228|ref|ZP_20773413.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|437516210|ref|ZP_20778102.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|437535532|ref|ZP_20781576.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|437551293|ref|ZP_20783735.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|437575635|ref|ZP_20790328.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|437592125|ref|ZP_20795027.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|437601672|ref|ZP_20797904.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|437623669|ref|ZP_20805040.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|437634253|ref|ZP_20806882.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|437658200|ref|ZP_20811531.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|437668375|ref|ZP_20815227.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|437688470|ref|ZP_20819778.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|437715233|ref|ZP_20827922.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|437734605|ref|ZP_20832289.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|437788694|ref|ZP_20837056.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|437811918|ref|ZP_20841415.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|437911930|ref|ZP_20850293.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|438041344|ref|ZP_20855746.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-5646]
gi|438087190|ref|ZP_20859337.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|438099712|ref|ZP_20863456.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|438110751|ref|ZP_20868149.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|438146889|ref|ZP_20876038.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Pullorum str. ATCC 9120]
gi|445135244|ref|ZP_21383154.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|445142479|ref|ZP_21386165.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Dublin str. SL1438]
gi|445152014|ref|ZP_21390638.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Dublin str. HWS51]
gi|445176867|ref|ZP_21397685.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|445185410|ref|ZP_21398941.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|445231471|ref|ZP_21405725.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|445251841|ref|ZP_21408927.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
gi|445337195|ref|ZP_21415919.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|445353418|ref|ZP_21421159.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|445363739|ref|ZP_21424662.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|54040497|sp|P67342.1|YMDB_SALTI RecName: Full=O-acetyl-ADP-ribose deacetylase; AltName:
Full=Regulator of RNase III activity
gi|54042974|sp|P67341.1|YMDB_SALTY RecName: Full=O-acetyl-ADP-ribose deacetylase; AltName:
Full=Regulator of RNase III activity
gi|16419662|gb|AAL20077.1| putative ACR protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|194455878|gb|EDX44717.1| protein YmdB [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|195630410|gb|EDX49036.1| protein YmdB [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|197244218|gb|EDY26838.1| protein YmdB [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|197939883|gb|ACH77216.1| protein YmdB [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|199602223|gb|EDZ00769.1| protein YmdB [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|205322423|gb|EDZ10262.1| protein YmdB [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|205328030|gb|EDZ14794.1| protein YmdB [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205331947|gb|EDZ18711.1| protein YmdB [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|206709148|emb|CAR33481.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|261246359|emb|CBG24168.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267992916|gb|ACY87801.1| hypothetical protein STM14_1313 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301157688|emb|CBW17180.1| Hypothetical UPF0189 protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|312912134|dbj|BAJ36108.1| hypothetical protein STMDT12_C11650 [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321223763|gb|EFX48826.1| Macro domain, possibly ADP-ribose binding module [Salmonella
enterica subsp. enterica serovar Typhimurium str.
TN061786]
gi|323129416|gb|ADX16846.1| Macro domain-containing protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|326623740|gb|EGE30085.1| Appr-1-p processing domain containing protein [Salmonella enterica
subsp. enterica serovar Dublin str. SD3246]
gi|326628194|gb|EGE34537.1| protein YmdB [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|332988038|gb|AEF07021.1| hypothetical protein STMUK_1115 [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|357205298|gb|AET53344.1| hypothetical protein SPUL_0946 [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|374353811|gb|AEZ45572.1| hypothetical protein STBHUCCB_18830 [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|380462691|gb|AFD58094.1| Hypothetical UPF0189 protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|392617655|gb|EIX00077.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Newport str. Levine 1]
gi|392621200|gb|EIX03565.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Newport str. Levine 15]
gi|392731569|gb|EIZ88793.1| hypothetical protein SEEN199_20685 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|392739317|gb|EIZ96456.1| hypothetical protein SEEN539_10393 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|392740993|gb|EIZ98108.1| hypothetical protein SEEN185_02221 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|392746522|gb|EJA03528.1| hypothetical protein SEEN953_11682 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|392748079|gb|EJA05069.1| hypothetical protein SEEN559_12066 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|392749281|gb|EJA06258.1| hypothetical protein SEEN188_01807 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|392777544|gb|EJA34227.1| hypothetical protein SEEN202_08004 [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|395983864|gb|EJH93054.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|395988665|gb|EJH97821.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|395989492|gb|EJH98626.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|395996461|gb|EJI05506.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|396000895|gb|EJI09909.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|396001735|gb|EJI10747.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|396014029|gb|EJI22915.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|396016890|gb|EJI25757.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|396017362|gb|EJI26227.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|396025093|gb|EJI33877.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|396027364|gb|EJI36128.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|396031547|gb|EJI40274.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|396038110|gb|EJI46754.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|396040609|gb|EJI49233.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|396041824|gb|EJI50447.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|396049211|gb|EJI57754.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|396053761|gb|EJI62254.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|396059382|gb|EJI67837.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|396062784|gb|EJI71195.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|396066830|gb|EJI75190.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|396073894|gb|EJI82194.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|414022582|gb|EKT06058.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|414049308|gb|EKT31524.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|414050865|gb|EKT33021.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|414055327|gb|EKT37238.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|414060727|gb|EKT42226.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|434938553|gb|ELL45506.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Pullorum str. ATCC 9120]
gi|434957195|gb|ELL50856.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|434963396|gb|ELL56506.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22704]
gi|434967077|gb|ELL59912.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|434973101|gb|ELL65489.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|434978994|gb|ELL70986.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|434983064|gb|ELL74872.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|434989494|gb|ELL81044.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|434995549|gb|ELL86865.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|434998679|gb|ELL89900.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|435007818|gb|ELL98645.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|435010289|gb|ELM01075.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|435015527|gb|ELM06053.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|435020582|gb|ELM10976.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE30663]
gi|435020954|gb|ELM11343.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|435024691|gb|ELM14897.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|435026686|gb|ELM16817.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|435036730|gb|ELM26549.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|435039229|gb|ELM29010.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|435043781|gb|ELM33498.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|435050884|gb|ELM40388.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|435051398|gb|ELM40900.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|435056952|gb|ELM46321.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|435064047|gb|ELM53194.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|435066431|gb|ELM55519.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|435074561|gb|ELM63385.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|435076712|gb|ELM65494.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|435079756|gb|ELM68451.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|435079809|gb|ELM68503.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|435088748|gb|ELM77203.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|435090236|gb|ELM78638.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|435094725|gb|ELM83064.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|435105898|gb|ELM93935.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|435111655|gb|ELM99543.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|435112707|gb|ELN00572.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|435117947|gb|ELN05636.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|435122914|gb|ELN10420.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|435129554|gb|ELN16845.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|435132479|gb|ELN19677.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|435135289|gb|ELN22398.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|435137274|gb|ELN24345.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|435150083|gb|ELN36767.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|435152244|gb|ELN38874.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|435153543|gb|ELN40151.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|435162569|gb|ELN48742.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|435165870|gb|ELN51872.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|435168848|gb|ELN54659.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|435174372|gb|ELN59814.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|435183243|gb|ELN68218.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|435184803|gb|ELN69724.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|435194436|gb|ELN78885.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|435196136|gb|ELN80481.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|435197721|gb|ELN81989.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13183-1]
gi|435198511|gb|ELN82685.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|435206778|gb|ELN90276.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|435211670|gb|ELN94758.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|435215623|gb|ELN98225.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|435217706|gb|ELO00121.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|435225567|gb|ELO07258.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|435229051|gb|ELO10446.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|435240491|gb|ELO20886.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|435244684|gb|ELO24859.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|435246115|gb|ELO26134.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|435253482|gb|ELO32956.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|435255080|gb|ELO34458.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|435260684|gb|ELO39874.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|435270895|gb|ELO49380.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|435281665|gb|ELO59327.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|435282584|gb|ELO60198.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|435283320|gb|ELO60896.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|435285142|gb|ELO62545.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|435286496|gb|ELO63751.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|435295462|gb|ELO71920.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|435297749|gb|ELO74016.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|435317179|gb|ELO90231.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|435318398|gb|ELO91339.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|435322243|gb|ELO94554.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-5646]
gi|435325310|gb|ELO97175.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|435331958|gb|ELP03056.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|444845892|gb|ELX71075.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|444849904|gb|ELX75013.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Dublin str. SL1438]
gi|444854796|gb|ELX79853.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Dublin str. HWS51]
gi|444856506|gb|ELX81535.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|444863365|gb|ELX88191.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|444870105|gb|ELX94645.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|444872958|gb|ELX97266.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|444873678|gb|ELX97969.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|444883450|gb|ELY07329.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|444889602|gb|ELY13023.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
Length = 179
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 77/129 (59%), Gaps = 7/129 (5%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
+ L++ +GDI++ VD AIV+ N L+ GG AIH AAGP L AC I + Q
Sbjct: 3 SRLQVIQGDITQLSVD----AIVNAANASLMGGGGVDGAIHRAAGPALLDACKLIRQQQG 58
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
C G A ITP KL VIHTVGPV+ + E ++L AY+NCL + +AN+ + I
Sbjct: 59 E--CQTGHAVITPAGKLSAKAVIHTVGPVWRGGEHQEAELLEEAYRNCLLLAEANHFRSI 116
Query: 133 AFPAISCGV 141
AFPAIS GV
Sbjct: 117 AFPAISTGV 125
>gi|422025290|ref|ZP_16371727.1| RNase III inhibitor, partial [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm1]
gi|427606539|ref|ZP_18941353.1| RNase III inhibitor, partial [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm4]
gi|427749822|ref|ZP_18965819.1| RNase III inhibitor, partial [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
gi|414021038|gb|EKT04602.1| RNase III inhibitor, partial [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm1]
gi|414039728|gb|EKT22390.1| RNase III inhibitor, partial [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm4]
gi|414066338|gb|EKT46917.1| RNase III inhibitor, partial [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
Length = 183
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 77/129 (59%), Gaps = 7/129 (5%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
+ L++ +GDI++ VD AIV+ N L+ GG AIH AAGP L AC I + Q
Sbjct: 7 SRLQVIQGDITQLSVD----AIVNAANASLMGGGGVDGAIHRAAGPALLDACKLIRQQQG 62
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
C G A ITP KL VIHTVGPV+ + E ++L AY+NCL + +AN+ + I
Sbjct: 63 E--CQTGHAVITPAGKLSAKAVIHTVGPVWRGGEHQEAELLEEAYRNCLLLAEANHFRSI 120
Query: 133 AFPAISCGV 141
AFPAIS GV
Sbjct: 121 AFPAISTGV 129
>gi|331702364|ref|YP_004399323.1| Appr-1-p processing protein [Lactobacillus buchneri NRRL B-30929]
gi|329129707|gb|AEB74260.1| Appr-1-p processing domain protein [Lactobacillus buchneri NRRL
B-30929]
Length = 164
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 86/160 (53%), Gaps = 14/160 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
K+ KGDI+ VD AIV+ N L GG AIH AAGP+ +AC ++
Sbjct: 4 FKLIKGDITTMQVD----AIVNAANTALSGGGGVDGAIHRAAGPEFDEACRKLNG----- 54
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
CP GEA++TPGF+LP VIHT GP++ H N +LR++Y N L N+ Q +AF
Sbjct: 55 -CPTGEAKVTPGFRLPAKFVIHTPGPIWRGGHNNEPQLLRNSYVNSLKRAVENHCQTVAF 113
Query: 135 PAISCGVSQI-MTHAIKLQTNCGFLESFWVELSAKVTTYD 173
P+IS GV + A K+ + + +F L + +D
Sbjct: 114 PSISTGVYDFPLDKAAKIAIDA--IRTFDAPLDVTMVCFD 151
>gi|56413865|ref|YP_150940.1| hypothetical protein SPA1704 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197362788|ref|YP_002142425.1| hypothetical protein SSPA1585 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|56128122|gb|AAV77628.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197094265|emb|CAR59771.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 179
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 77/129 (59%), Gaps = 7/129 (5%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
+ L++ +GDI++ VD AIV+ N L+ GG AIH AAGP L AC I + Q
Sbjct: 3 SRLQVIQGDITQLSVD----AIVNAANASLMGGGGVDGAIHRAAGPALLDACKLIRQQQG 58
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
C G A ITP KL VIHTVGPV+ + E ++L AY+NCL + +AN+ + I
Sbjct: 59 E--CQTGHAVITPAGKLSAKAVIHTVGPVWRGGEHQEAELLEEAYRNCLLLAEANHFRSI 116
Query: 133 AFPAISCGV 141
AFPAIS GV
Sbjct: 117 AFPAISTGV 125
>gi|381202514|ref|ZP_09909628.1| Appr-1-p processing domain-containing protein [Sphingobium
yanoikuyae XLDN2-5]
Length = 178
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 76/129 (58%), Gaps = 11/129 (8%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T + GDI+R VD AIV+ N LL GG AIH AAGP+L + C I
Sbjct: 6 TRWDVVTGDITRCAVD----AIVNAANNSLLGGGGVDGAIHRAAGPELLEECRGIGC--- 58
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
CP GEARIT G++LP +VIHTVGP++ E D+L S Y + LS+ + + ++ +
Sbjct: 59 ---CPTGEARITRGYRLPARYVIHTVGPIWQGGNQGERDLLASCYSHSLSLARHHGLRAV 115
Query: 133 AFPAISCGV 141
AFPAIS GV
Sbjct: 116 AFPAISTGV 124
>gi|427548715|ref|ZP_18927039.1| RNase III inhibitor, partial [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
gi|414020962|gb|EKT04528.1| RNase III inhibitor, partial [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
Length = 185
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 77/129 (59%), Gaps = 7/129 (5%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
+ L++ +GDI++ VD AIV+ N L+ GG AIH AAGP L AC I + Q
Sbjct: 9 SRLQVIQGDITQLSVD----AIVNAANASLMGGGGVDGAIHRAAGPALLDACKLIRQQQG 64
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
C G A ITP KL VIHTVGPV+ + E ++L AY+NCL + +AN+ + I
Sbjct: 65 E--CQTGHAVITPAGKLSAKAVIHTVGPVWRGGEHQEAELLEEAYRNCLLLAEANHFRSI 122
Query: 133 AFPAISCGV 141
AFPAIS GV
Sbjct: 123 AFPAISTGV 131
>gi|294936885|ref|XP_002781895.1| Protein LRP16, putative [Perkinsus marinus ATCC 50983]
gi|239893019|gb|EER13690.1| Protein LRP16, putative [Perkinsus marinus ATCC 50983]
Length = 179
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 77/133 (57%), Gaps = 6/133 (4%)
Query: 10 FSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIP 69
S K+ + I DI++ +AIV+ N LL GG AIH AAGP+L++ C
Sbjct: 1 MSVKSRVSIIVADITKL---EGVEAIVNAANSSLLGGGGVDGAIHRAAGPELKRYCEH-- 55
Query: 70 EAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANN 128
E + RCP GE+RITP F L HVIHTVGPV++ E ++LR+ Y+ L + N+
Sbjct: 56 EFEGPKRCPTGESRITPAFNLKHCHVIHTVGPVWHGGNRREPELLRNCYRTSLQLATEND 115
Query: 129 IQYIAFPAISCGV 141
I IAFP IS G+
Sbjct: 116 IDSIAFPGISTGI 128
>gi|437833577|ref|ZP_20844743.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
gi|435302088|gb|ELO78077.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
Length = 179
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 77/129 (59%), Gaps = 7/129 (5%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
+ L++ +GDI++ VD AIV+ N L+ GG AIH AAGP L AC I + Q
Sbjct: 3 SRLQVIQGDITQLSVD----AIVNAANASLMGGGGVDGAIHRAAGPALLDACKLIRQQQG 58
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
C G A ITP KL VIHTVGPV+ + E ++L AY+NCL + +AN+ + I
Sbjct: 59 E--CQTGHAVITPAGKLSAKAVIHTVGPVWRGGEHQEAELLEEAYRNCLLLAEANHFRSI 116
Query: 133 AFPAISCGV 141
AFPAIS GV
Sbjct: 117 AFPAISTGV 125
>gi|383865112|ref|XP_003708019.1| PREDICTED: MACRO domain-containing protein 2-like [Megachile
rotundata]
Length = 270
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 78/138 (56%), Gaps = 14/138 (10%)
Query: 4 KVQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQK 63
KV+ + + I +GDI+ +D AIV+ N LL GG AIH+AAGP+L+K
Sbjct: 93 KVEKVDEDIAKKISIWQGDITSLEID----AIVNAANSSLLGGGGVDGAIHKAAGPNLKK 148
Query: 64 ACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSV 123
C + C GEA+IT G+ LP HVIHTVGP PE LR Y+N L+V
Sbjct: 149 ECATLG------GCHVGEAKITGGYMLPAKHVIHTVGPQGE---KPEK-LRECYENSLAV 198
Query: 124 GKANNIQYIAFPAISCGV 141
G+ N ++ IAFP IS G+
Sbjct: 199 GRENQLRVIAFPCISTGI 216
>gi|407694758|ref|YP_006819546.1| RNase III regulator YmdB [Alcanivorax dieselolei B5]
gi|407252096|gb|AFT69203.1| RNase III regulator YmdB [Alcanivorax dieselolei B5]
Length = 172
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 72/128 (56%), Gaps = 9/128 (7%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
TSL+I+ GDI+R DAIV+ N L GG A AIH AAGP+L +AC P
Sbjct: 2 TSLEITVGDITRQA---DMDAIVNAANRELKPGGGVAGAIHRAAGPELARAC------AP 52
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
PGEA IT GF LP +VIH +GPV+ + +L Y+N L + + + +A
Sbjct: 53 LAPIRPGEAVITAGFDLPNRYVIHCLGPVYQLDQPSDQLLADCYRNALELAVSRELASVA 112
Query: 134 FPAISCGV 141
FPAIS GV
Sbjct: 113 FPAISTGV 120
>gi|389797225|ref|ZP_10200268.1| RNase III inhibitor [Rhodanobacter sp. 116-2]
gi|388447599|gb|EIM03599.1| RNase III inhibitor [Rhodanobacter sp. 116-2]
Length = 173
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/127 (49%), Positives = 79/127 (62%), Gaps = 5/127 (3%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+K+ DI+R + DAIV+ N LL GG AIH AGP L KAC +PE P V
Sbjct: 3 IKVIHADITRL----APDAIVNAANSGLLGGGGVDGAIHRTAGPALLKACRALPEIAPGV 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
RCP GEARITPGF LP VIHTVGPV++ E ++L ++N L + + ++ IAF
Sbjct: 59 RCPIGEARITPGFALPARWVIHTVGPVWHGGDEGEAELLARCHRNALRLLRERALRTIAF 118
Query: 135 PAISCGV 141
PAISCGV
Sbjct: 119 PAISCGV 125
>gi|404330315|ref|ZP_10970763.1| Appr-1-p processing domain-containing protein [Sporolactobacillus
vineae DSM 21990 = SL153]
Length = 171
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 79/128 (61%), Gaps = 11/128 (8%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
S +I GDI++ +DAIV+ N LL GG AIH AAGP+L C ++
Sbjct: 3 SFEIVSGDITKI----QADAIVNAANTTLLGGGGVDGAIHRAAGPELLAECRKLHG---- 54
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIA 133
C GEA+IT G+ LP +VIHT GP++N + E D+LR++Y+N L++ +A+ + +A
Sbjct: 55 --CATGEAKITEGYHLPAKYVIHTPGPIWNGGTHHEQDLLRNSYRNSLALAEAHGCRSVA 112
Query: 134 FPAISCGV 141
FP+IS GV
Sbjct: 113 FPSISTGV 120
>gi|227514077|ref|ZP_03944126.1| Appr-1-p processing domain protein [Lactobacillus fermentum ATCC
14931]
gi|227087558|gb|EEI22870.1| Appr-1-p processing domain protein [Lactobacillus fermentum ATCC
14931]
Length = 169
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 76/127 (59%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++++GDI++ VD AIV+ N L GG AIH AAGP L AC +
Sbjct: 4 IEVTQGDITKLKVD----AIVNAANTTLRGGGGVDGAIHRAAGPGLDVACAKFGG----- 54
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
CP GEARITPGF LP + +IHT GPV+ H + +L ++Y+N L + AN + +AF
Sbjct: 55 -CPTGEARITPGFNLPATFIIHTPGPVWQGGHHHEASLLANSYRNSLQLAVANGCRTVAF 113
Query: 135 PAISCGV 141
P+IS GV
Sbjct: 114 PSISTGV 120
>gi|197250409|ref|YP_002146897.1| hypothetical protein SeAg_B2042 [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|375001778|ref|ZP_09726118.1| RNase III regulator YmdB [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|440761837|ref|ZP_20940905.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Agona str. SH11G1113]
gi|440767491|ref|ZP_20946468.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Agona str. SH08SF124]
gi|440773942|ref|ZP_20952830.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Agona str. SH10GFN094]
gi|334351230|sp|B5F961.1|YMDB_SALA4 RecName: Full=O-acetyl-ADP-ribose deacetylase; AltName:
Full=Regulator of RNase III activity
gi|197214112|gb|ACH51509.1| protein YmdB [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|353076466|gb|EHB42226.1| RNase III regulator YmdB [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|436413460|gb|ELP11393.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Agona str. SH10GFN094]
gi|436419883|gb|ELP17755.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Agona str. SH08SF124]
gi|436424447|gb|ELP22221.1| RNase III inhibitor [Salmonella enterica subsp. enterica serovar
Agona str. SH11G1113]
Length = 179
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 77/129 (59%), Gaps = 7/129 (5%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
+ L++ +GDI++ VD AIV+ N L+ GG AIH AAGP L AC I + Q
Sbjct: 3 SRLQVIQGDITQLSVD----AIVNAANASLMGGGGVDGAIHRAAGPALLDACKLIRQQQG 58
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
C G A ITP KL VIHTVGPV+ E ++L +AY+NCL + +AN+ + I
Sbjct: 59 E--CQTGHAVITPAGKLSAKAVIHTVGPVWRGGEYQEAELLEAAYRNCLLLAEANHFRSI 116
Query: 133 AFPAISCGV 141
AFPAIS GV
Sbjct: 117 AFPAISTGV 125
>gi|301063800|ref|ZP_07204298.1| macro domain protein [delta proteobacterium NaphS2]
gi|300442096|gb|EFK06363.1| macro domain protein [delta proteobacterium NaphS2]
Length = 197
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 75/130 (57%), Gaps = 11/130 (8%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K ++I +GDI++ VD AIV+ N LL GG AIH AAGP+L +I
Sbjct: 26 KEKIRIIQGDITKLQVD----AIVNAANNSLLGGGGVDGAIHRAAGPELLNETRKIGG-- 79
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHC-NPEDILRSAYKNCLSVGKANNIQY 131
CP GEAR++ G+KLP S VIHTVGP++ N E +L Y+N L ++ +
Sbjct: 80 ----CPTGEARVSKGYKLPASWVIHTVGPIWRGGGQNEERLLADCYRNSLRAAVESDAKT 135
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 136 VAFPAISTGV 145
>gi|404493680|ref|YP_006717786.1| O-acetyl-ADP-ribose deacetylase [Pelobacter carbinolicus DSM 2380]
gi|77545715|gb|ABA89277.1| O-acetyl-ADP-ribose deacetylase [Pelobacter carbinolicus DSM 2380]
Length = 175
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 73/131 (55%), Gaps = 10/131 (7%)
Query: 11 STKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPE 70
T +++ GDI+R VD AIV+ N LL GG AIH AAGP L + C +
Sbjct: 4 ETFGRIELLVGDITRLEVD----AIVNAANRSLLGGGGVDGAIHRAAGPRLVEECRSLNG 59
Query: 71 AQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQ 130
C G+A+IT G+ LP HVIHTVGPV+ N +L S Y+ L + + + +
Sbjct: 60 ------CETGDAKITDGYDLPARHVIHTVGPVYRGRPNDPKLLASCYRTSLELARQHGLT 113
Query: 131 YIAFPAISCGV 141
+AFPAISCG+
Sbjct: 114 SVAFPAISCGI 124
>gi|292493073|ref|YP_003528512.1| Appr-1-p processing domain-containing protein [Nitrosococcus
halophilus Nc4]
gi|291581668|gb|ADE16125.1| Appr-1-p processing domain protein [Nitrosococcus halophilus Nc4]
Length = 173
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 76/130 (58%), Gaps = 11/130 (8%)
Query: 12 TKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEA 71
+K+ +K+ +GDI+ D DAIV+ N+ LL GG AIH AAGP+L++ C +
Sbjct: 2 SKSRIKVIQGDIT----DMEVDAIVNAANQTLLGGGGVDGAIHRAAGPELKEECRNLG-- 55
Query: 72 QPRVRCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQ 130
C GEA++T G++LP +VIHTVGP++ N E +L Y+N L + I
Sbjct: 56 ----GCKTGEAKLTHGYQLPARYVIHTVGPIWKGGQHNEEQLLAQCYRNSLKIALEKGIS 111
Query: 131 YIAFPAISCG 140
+AFP+IS G
Sbjct: 112 TLAFPSISTG 121
>gi|168237224|ref|ZP_02662282.1| protein YmdB [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|194737747|ref|YP_002114145.1| hypothetical protein SeSA_A1214 [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|194713249|gb|ACF92470.1| protein YmdB [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197289874|gb|EDY29235.1| protein YmdB [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
Length = 179
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 76/129 (58%), Gaps = 7/129 (5%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
+ L++ +GDI++ VD AIV+ N L+ GG AIH AAGP L AC I + Q
Sbjct: 3 SRLQVIQGDITQLSVD----AIVNAANASLMGGGGVDGAIHRAAGPALLDACKLIRQQQG 58
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
C G A ITP KL VIHTVGPV+ E ++L AY+NCL + +AN+ + I
Sbjct: 59 E--CQTGHAVITPAGKLSAKAVIHTVGPVWRGGEYQEAELLEEAYRNCLLLAEANHFRSI 116
Query: 133 AFPAISCGV 141
AFPAIS GV
Sbjct: 117 AFPAISTGV 125
>gi|392411122|ref|YP_006447729.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Desulfomonile tiedjei DSM 6799]
gi|390624258|gb|AFM25465.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Desulfomonile tiedjei DSM 6799]
Length = 170
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 73/129 (56%), Gaps = 11/129 (8%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K + + +GDI+ VD AIV+ N LL GG AIH AAGP+L C Q+
Sbjct: 2 KAKIHLLQGDITSADVD----AIVNAANNSLLGGGGVDGAIHRAAGPELLAECRQLGG-- 55
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
C G+A+IT G KL HVIHTVGP++ + E ++L S Y+ C V NN+Q
Sbjct: 56 ----CETGDAKITKGHKLKAKHVIHTVGPIYRGGRSKEPELLASCYRRCFEVAAENNLQS 111
Query: 132 IAFPAISCG 140
+AFP+IS G
Sbjct: 112 LAFPSISTG 120
>gi|342215682|ref|ZP_08708329.1| macro domain protein [Peptoniphilus sp. oral taxon 375 str. F0436]
gi|341586572|gb|EGS29972.1| macro domain protein [Peptoniphilus sp. oral taxon 375 str. F0436]
Length = 167
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 93/171 (54%), Gaps = 23/171 (13%)
Query: 18 ISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRC 77
I KGDI++ VD IV+ N LL GG AIH+AAGP L + C ++ C
Sbjct: 4 IVKGDITQCPVD----GIVNAANPSLLGGGGVDGAIHKAAGPGLLEECKKLK------GC 53
Query: 78 PPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAFPA 136
P G+ARIT G++L VIHTVGP++ + E +LRSAY++ L + K N ++ +AFP
Sbjct: 54 PTGQARITDGYQLKAKKVIHTVGPIYQDGLHRESYLLRSAYQSSLDLAKENGLKTLAFPL 113
Query: 137 ISCGV-----SQIMTHAIK-LQTNCGFLESFWVELSAKVTTYDMDLIETAL 181
IS GV + MT AI+ LQ + ++ L + DL E AL
Sbjct: 114 ISGGVYGYPLKECMTIAIESLQEGSKDFQDIYLVL------FTEDLEEMAL 158
>gi|347540935|ref|YP_004848360.1| Appr-1-p processing domain containing protein [Pseudogulbenkiania
sp. NH8B]
gi|345644113|dbj|BAK77946.1| Appr-1-p processing domain protein [Pseudogulbenkiania sp. NH8B]
Length = 180
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 11/129 (8%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T L++ +G I++ VD AIV+ N LL GG AIH AAGP+L C +
Sbjct: 8 TVLEVWRGGITQLDVD----AIVNAANSSLLGGGGVDGAIHRAAGPELLAECRTLGG--- 60
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
CP G+AR+T G++LP HVIHTVGPV++ + E ++L S Y+ L + + +
Sbjct: 61 ---CPTGQARLTRGYRLPARHVIHTVGPVWHGGASGEAELLASCYRASLQLAAEHGFHSV 117
Query: 133 AFPAISCGV 141
AFPAISCGV
Sbjct: 118 AFPAISCGV 126
>gi|293381010|ref|ZP_06627037.1| putative RNase III regulator YmdB [Lactobacillus crispatus 214-1]
gi|290922427|gb|EFD99402.1| putative RNase III regulator YmdB [Lactobacillus crispatus 214-1]
Length = 176
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 72/127 (56%), Gaps = 10/127 (7%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
++KI KGDI++ +DAIV+ N LL GG AIH AAGP L + C +
Sbjct: 12 NIKIIKGDITKM----KADAIVNAANNSLLGGGGVDGAIHRAAGPRLLEECMALHG---- 63
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
CP GEARIT G+ LP +VIHTVGPV+ + +L S Y N L++ K + + F
Sbjct: 64 --CPTGEARITHGYNLPAKYVIHTVGPVYAGKTSDAHMLASCYYNSLALAKKAGLHSVIF 121
Query: 135 PAISCGV 141
AIS GV
Sbjct: 122 SAISTGV 128
>gi|169333813|ref|ZP_02861006.1| hypothetical protein ANASTE_00199 [Anaerofustis stercorihominis DSM
17244]
gi|169259378|gb|EDS73344.1| macro domain protein [Anaerofustis stercorihominis DSM 17244]
Length = 173
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 73/126 (57%), Gaps = 11/126 (8%)
Query: 17 KISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVR 76
KI GDI++ +DAIV+ N LL GG AIH AAG L + C +
Sbjct: 6 KIVMGDITK----EETDAIVNAANTSLLGGGGVDGAIHRAAGKKLLEECRTLH------G 55
Query: 77 CPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDIL-RSAYKNCLSVGKANNIQYIAFP 135
C GEA+IT G+ L +VIHTVGP++ + E +L +SAYKN L + K N ++ IAFP
Sbjct: 56 CRTGEAKITKGYDLKAKYVIHTVGPIYRGGKDNEAVLLKSAYKNSLKLAKENGVKTIAFP 115
Query: 136 AISCGV 141
+IS GV
Sbjct: 116 SISTGV 121
>gi|225019652|ref|ZP_03708844.1| hypothetical protein CLOSTMETH_03605 [Clostridium methylpentosum
DSM 5476]
gi|224947497|gb|EEG28706.1| hypothetical protein CLOSTMETH_03605 [Clostridium methylpentosum
DSM 5476]
Length = 172
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 86/162 (53%), Gaps = 14/162 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L++ +GDI++ C +DAIV+ N LL GG AIH AAGP L + C Q
Sbjct: 4 LELVRGDITKQC----ADAIVNAANTSLLGGGGVDGAIHRAAGPKLLEEC------QDLG 53
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAF 134
CP GEA++T G+ LP VIHT GP++ + ED +L S Y +CLS+ N + +AF
Sbjct: 54 GCPTGEAKLTRGYNLPAKFVIHTPGPIWRGGASHEDELLASCYTSCLSLAVENGCKTVAF 113
Query: 135 PAISCGVSQI---MTHAIKLQTNCGFLESFWVELSAKVTTYD 173
P+IS GV AI + FLE+ ++ +D
Sbjct: 114 PSISTGVYHFPLDRAAAIAVGAIWSFLETDGTLERVRIVCFD 155
>gi|357405998|ref|YP_004917922.1| hypothetical protein MEALZ_2662 [Methylomicrobium alcaliphilum 20Z]
gi|351718663|emb|CCE24337.1| conserved protein of unknown function [Methylomicrobium
alcaliphilum 20Z]
Length = 174
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 80/129 (62%), Gaps = 11/129 (8%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
++KI + +I++ VD AIV+ N LL GG AIH AAGP+L +AC ++
Sbjct: 3 ATIKIIQDNITQLKVD----AIVNAANVSLLGGGGVDGAIHSAAGPELLEACKKLN---- 54
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYI 132
C G+A+ITPGF+LP VIHTVGP+++ N E +L S Y++CL + + + +
Sbjct: 55 --GCRVGQAKITPGFRLPARFVIHTVGPIWSGGDNDESKLLASCYRSCLDIAAVHGFKSM 112
Query: 133 AFPAISCGV 141
AFPAISCGV
Sbjct: 113 AFPAISCGV 121
>gi|325279018|ref|YP_004251560.1| Appr-1-p processing domain-containing protein [Odoribacter
splanchnicus DSM 20712]
gi|324310827|gb|ADY31380.1| Appr-1-p processing domain protein [Odoribacter splanchnicus DSM
20712]
Length = 172
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 77/130 (59%), Gaps = 13/130 (10%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L+I DI+ VD AIV+ N LL GG AIH AAGP+L + C ++
Sbjct: 4 LEILLDDITHLKVD----AIVNAANSSLLGGGGVDGAIHRAAGPELLEECRKLNG----- 54
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF--NFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
CP GEA+IT G++LP +HVIHTVGPV+ H PE +L S Y+N L + N ++ IA
Sbjct: 55 -CPTGEAKITKGYRLPAAHVIHTVGPVYRDGGHHEPE-LLASCYRNSLRLAVENGLKTIA 112
Query: 134 FPAISCGVSQ 143
FP IS GV +
Sbjct: 113 FPCISTGVYR 122
>gi|452994204|emb|CCQ94225.1| conserved hypothetical protein [Clostridium ultunense Esp]
Length = 179
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 78/146 (53%), Gaps = 19/146 (13%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K L I +GDI++ VD A+V+ N LL GG AIH A GP + + C +I
Sbjct: 6 KAKLNIIQGDITKMEVD----AVVNAANNTLLGGGGVDGAIHRAGGPTILEQCKKIG--- 58
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
CP GEARIT +P +VIHTVGPV+ E +L +AY N + + K N++
Sbjct: 59 ---GCPTGEARITTAGNMPSKYVIHTVGPVYKDGRKGETKLLYNAYYNSMKLAKEYNLKT 115
Query: 132 IAFPAISCGV--------SQIMTHAI 149
IAFPAIS GV QI T A+
Sbjct: 116 IAFPAISTGVYNYPKLEAGQIATKAV 141
>gi|163846866|ref|YP_001634910.1| appr-1-p processing domain-containing protein [Chloroflexus
aurantiacus J-10-fl]
gi|222524687|ref|YP_002569158.1| Appr-1-p processing protein [Chloroflexus sp. Y-400-fl]
gi|163668155|gb|ABY34521.1| Appr-1-p processing domain protein [Chloroflexus aurantiacus
J-10-fl]
gi|222448566|gb|ACM52832.1| Appr-1-p processing domain protein [Chloroflexus sp. Y-400-fl]
Length = 190
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 79/132 (59%), Gaps = 13/132 (9%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGP-DLQKACYQIPEA 71
+ L++ +GDI V + DAIV+ NE LL GG AI AAG +LQ+AC +
Sbjct: 12 QACLEVVEGDI----VSQQVDAIVNAANEQLLQGGGVCGAIFRAAGAAELQRACDAVAP- 66
Query: 72 QPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE--DILRSAYKNCLSVGKANNI 129
CP GEARITPGF LP ++IH VGP+F+ + E +L SAY+ L++ + +
Sbjct: 67 -----CPTGEARITPGFALPARYIIHAVGPIFDHYAPSEADRLLISAYRASLALARQYGL 121
Query: 130 QYIAFPAISCGV 141
Q IAFP+I+ G+
Sbjct: 122 QSIAFPSIATGI 133
>gi|295693748|ref|YP_003602358.1| appr-1-p processing domain protein [Lactobacillus crispatus ST1]
gi|295031854|emb|CBL51333.1| Appr-1-p processing domain protein [Lactobacillus crispatus ST1]
Length = 167
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 72/127 (56%), Gaps = 10/127 (7%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
++KI KGDI++ +DAIV+ N LL GG AIH AAGP L + C +
Sbjct: 3 NIKIIKGDITKM----KADAIVNAANNSLLGGGGVDGAIHRAAGPRLLEECMTLHG---- 54
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
CP GEARIT G+ LP +VIHTVGPV+ + +L S Y N L++ K + + F
Sbjct: 55 --CPTGEARITHGYNLPAKYVIHTVGPVYAGKTSDAHMLASCYYNSLALAKKAGLHSVIF 112
Query: 135 PAISCGV 141
AIS GV
Sbjct: 113 SAISTGV 119
>gi|256843969|ref|ZP_05549456.1| histone macroH2A1 family phosphatase [Lactobacillus crispatus
125-2-CHN]
gi|256849469|ref|ZP_05554901.1| histone macroH2A1 family phosphatase [Lactobacillus crispatus
MV-1A-US]
gi|262046138|ref|ZP_06019101.1| histone macroH2A1 family phosphatase [Lactobacillus crispatus
MV-3A-US]
gi|256613874|gb|EEU19076.1| histone macroH2A1 family phosphatase [Lactobacillus crispatus
125-2-CHN]
gi|256713585|gb|EEU28574.1| histone macroH2A1 family phosphatase [Lactobacillus crispatus
MV-1A-US]
gi|260573468|gb|EEX30025.1| histone macroH2A1 family phosphatase [Lactobacillus crispatus
MV-3A-US]
Length = 167
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 72/127 (56%), Gaps = 10/127 (7%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
++KI KGDI++ +DAIV+ N LL GG AIH AAGP L + C +
Sbjct: 3 NIKIIKGDITKM----KADAIVNAANNSLLGGGGVDGAIHRAAGPRLLEECMALHG---- 54
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
CP GEARIT G+ LP +VIHTVGPV+ + +L S Y N L++ K + + F
Sbjct: 55 --CPTGEARITHGYNLPAKYVIHTVGPVYAGKTSDAHMLASCYYNSLALAKKAGLHSVIF 112
Query: 135 PAISCGV 141
AIS GV
Sbjct: 113 SAISTGV 119
>gi|427409151|ref|ZP_18899353.1| hypothetical protein HMPREF9718_01827 [Sphingobium yanoikuyae ATCC
51230]
gi|425711284|gb|EKU74299.1| hypothetical protein HMPREF9718_01827 [Sphingobium yanoikuyae ATCC
51230]
Length = 177
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 76/129 (58%), Gaps = 11/129 (8%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T + GDI+R VD AIV+ N LL GG AIH AAGP+L + C I
Sbjct: 5 TRWDVVTGDITRCAVD----AIVNAANNSLLGGGGVDGAIHRAAGPELLEECRGIGC--- 57
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
CP GEARIT G++LP +VIH+VGPV+ E D+L S Y + LS+ + + ++ +
Sbjct: 58 ---CPTGEARITRGYRLPARYVIHSVGPVWQGGNQGERDLLASCYSHSLSLARHHGLRAV 114
Query: 133 AFPAISCGV 141
AFPAIS GV
Sbjct: 115 AFPAISTGV 123
>gi|386001699|ref|YP_005919998.1| Appr-1-p processing protein [Methanosaeta harundinacea 6Ac]
gi|357209755|gb|AET64375.1| Appr-1-p processing domain protein [Methanosaeta harundinacea 6Ac]
Length = 167
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 74/129 (57%), Gaps = 11/129 (8%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K +++ GDI+R ++AIV+ N LL GG AIH AAGP L + C +
Sbjct: 2 KGRIEVILGDITRV----EAEAIVNAANPTLLGGGGVDGAIHRAAGPRLLEECRTLGG-- 55
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHC-NPEDILRSAYKNCLSVGKANNIQY 131
CP GEARIT G+ LP VIHTVGP+++ ED+L AY++ L + N I+
Sbjct: 56 ----CPTGEARITKGYDLPAKFVIHTVGPIWHGGGRGEEDLLAKAYRSSLELAGENGIKT 111
Query: 132 IAFPAISCG 140
IAFPAIS G
Sbjct: 112 IAFPAISAG 120
>gi|312983950|ref|ZP_07791299.1| appr-1-p processing enzyme domain protein [Lactobacillus crispatus
CTV-05]
gi|423319314|ref|ZP_17297190.1| hypothetical protein HMPREF9250_00380 [Lactobacillus crispatus
FB049-03]
gi|423320857|ref|ZP_17298729.1| hypothetical protein HMPREF9249_00729 [Lactobacillus crispatus
FB077-07]
gi|310894627|gb|EFQ43700.1| appr-1-p processing enzyme domain protein [Lactobacillus crispatus
CTV-05]
gi|405588798|gb|EKB62400.1| hypothetical protein HMPREF9250_00380 [Lactobacillus crispatus
FB049-03]
gi|405598812|gb|EKB72007.1| hypothetical protein HMPREF9249_00729 [Lactobacillus crispatus
FB077-07]
Length = 167
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 71/126 (56%), Gaps = 10/126 (7%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+KI KGDI++ +DAIV+ N LL GG AIH AAGP L + C +
Sbjct: 4 IKIIKGDITKM----KADAIVNAANNSLLGGGGVDGAIHRAAGPRLLEECMTLHG----- 54
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFP 135
CP GEARIT G+ LP +VIHTVGPV+ + +L S Y N L++ K + + F
Sbjct: 55 -CPTGEARITHGYNLPAKYVIHTVGPVYAGKTSDAHMLASCYYNSLALAKKAGLHSVIFS 113
Query: 136 AISCGV 141
AIS GV
Sbjct: 114 AISTGV 119
>gi|434391690|ref|YP_007126637.1| Appr-1-p processing domain protein [Gloeocapsa sp. PCC 7428]
gi|428263531|gb|AFZ29477.1| Appr-1-p processing domain protein [Gloeocapsa sp. PCC 7428]
Length = 173
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 71/122 (58%), Gaps = 11/122 (9%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPG 80
GDI++ VD AIV+ N LL GG AIH AAGP+L K C Q+ C G
Sbjct: 10 GDITQQNVD----AIVNAANNSLLGGGGVDGAIHRAAGPELLKECRQLQG------CATG 59
Query: 81 EARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAFPAISC 139
EA+IT G+ LP VIHTVGPV+ ED +L Y+N L++ + IQ IAFPAIS
Sbjct: 60 EAKITKGYNLPAKWVIHTVGPVWRGGRQGEDELLARCYRNSLALTLEHQIQTIAFPAIST 119
Query: 140 GV 141
GV
Sbjct: 120 GV 121
>gi|152985617|ref|YP_001346829.1| hypothetical protein PSPA7_1445 [Pseudomonas aeruginosa PA7]
gi|452878801|ref|ZP_21955974.1| hypothetical protein G039_19603 [Pseudomonas aeruginosa VRFPA01]
gi|150960775|gb|ABR82800.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
gi|452184569|gb|EME11587.1| hypothetical protein G039_19603 [Pseudomonas aeruginosa VRFPA01]
Length = 173
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 78/129 (60%), Gaps = 11/129 (8%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T +++ +GDI+R VD AIV+ N LL GG AIH AAGP+L AC +
Sbjct: 2 TEVRVWQGDITRLAVD----AIVNAANSSLLGGGGVDGAIHRAAGPELAAACRLLHG--- 54
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
C G A+ITPGF+L +HVIHTVGPV+ N E ++L S Y++ L++ + +
Sbjct: 55 ---CKTGAAKITPGFRLSAAHVIHTVGPVWRGGDNGEAELLASCYRHSLALAEQAEAASV 111
Query: 133 AFPAISCGV 141
AFPAISCG+
Sbjct: 112 AFPAISCGI 120
>gi|339638245|emb|CCC17321.1| UPF0189 protein lp_3408 [Lactobacillus pentosus IG1]
Length = 172
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 74/127 (58%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+K+ GDI++ VD AIV+ N LL GG AIH AAGP+L AC +P
Sbjct: 4 IKVIHGDITKMAVD----AIVNAANTSLLGGGGVDGAIHRAAGPELLAAC------RPLH 53
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
C GEA+ITPGF+LP VIHT GPV+ E +L ++Y+N L++ N +AF
Sbjct: 54 GCATGEAKITPGFRLPAKFVIHTPGPVWQGGQRDELRLLANSYRNSLNLAAENGCHTVAF 113
Query: 135 PAISCGV 141
P+IS GV
Sbjct: 114 PSISTGV 120
>gi|218549225|ref|YP_002383016.1| hypothetical protein EFER_1884 [Escherichia fergusonii ATCC 35469]
gi|218356766|emb|CAQ89394.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469]
Length = 182
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 75/130 (57%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K+ + + +GDI++ VD IV+ N L+ GG AIH AAGP+L +AC ++ Q
Sbjct: 7 KSRIHVLQGDITQLAVD----VIVNAANSSLMGGGGVDGAIHRAAGPELLEACQKVRRQQ 62
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQY 131
CP G A IT LP VIHTVGPV+ + N + +L AY N L + +AN +
Sbjct: 63 G--ECPTGHAVITIAGNLPARAVIHTVGPVWRDGEHNEDQLLHDAYLNSLKLAQANGYKS 120
Query: 132 IAFPAISCGV 141
IAFPAIS GV
Sbjct: 121 IAFPAISTGV 130
>gi|147676981|ref|YP_001211196.1| phosphatase [Pelotomaculum thermopropionicum SI]
gi|146273078|dbj|BAF58827.1| predicted phosphatase homologous [Pelotomaculum thermopropionicum
SI]
Length = 232
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 78/129 (60%), Gaps = 7/129 (5%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T +KI KGDI+ + ++AIV+ N L+ GG AIH A GP + + C +I Q
Sbjct: 53 TVIKIIKGDITL----QDTEAIVNAANSSLMGGGGVDGAIHRAGGPQILQECKEIRARQG 108
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYI 132
+ P G+A IT G +L +VIHTVGPV++ ED +LRSAY N LS+ + I+ I
Sbjct: 109 ML--PTGQAVITGGGRLKARYVIHTVGPVWSGGSKGEDGLLRSAYHNSLSLAREKGIRSI 166
Query: 133 AFPAISCGV 141
+FP+IS GV
Sbjct: 167 SFPSISTGV 175
>gi|114705750|ref|ZP_01438653.1| hypothetical protein FP2506_14829 [Fulvimarina pelagi HTCC2506]
gi|114538596|gb|EAU41717.1| hypothetical protein FP2506_14829 [Fulvimarina pelagi HTCC2506]
Length = 179
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 74/131 (56%), Gaps = 11/131 (8%)
Query: 12 TKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEA 71
T +++ GDI+ V+ AIV+ NE LL GG AIH AAGP L + C I
Sbjct: 8 NDTVIEVLTGDITALDVE----AIVNAANESLLGGGGVDGAIHRAAGPQLLEECRTIGG- 62
Query: 72 QPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQ 130
CP GEARIT G+ L HVIHTVGPV+ E D+L SAY+ ++ +++
Sbjct: 63 -----CPTGEARITRGYDLAARHVIHTVGPVWRGGDGGEHDLLASAYRQSFALAHEHDLA 117
Query: 131 YIAFPAISCGV 141
IAFPAIS GV
Sbjct: 118 SIAFPAISTGV 128
>gi|334882533|emb|CCB83565.1| UPF0189 protein lp_3408 [Lactobacillus pentosus MP-10]
Length = 168
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 75/129 (58%), Gaps = 11/129 (8%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
+ +K+ GDI++ VD AIV+ N LL GG AIH AAGP+L AC +P
Sbjct: 2 SGIKVIHGDITKMAVD----AIVNAANTSLLGGGGVDGAIHRAAGPELLAAC------RP 51
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
C GEA+ITPGF+LP VIHT GPV+ E +L ++Y+N L++ N +
Sbjct: 52 LHGCDTGEAKITPGFRLPAKFVIHTPGPVWQGGQRDELRLLANSYRNSLNLAAENGCHTV 111
Query: 133 AFPAISCGV 141
AFP+IS GV
Sbjct: 112 AFPSISTGV 120
>gi|322693919|gb|EFY85763.1| hypothetical protein MAC_08148 [Metarhizium acridum CQMa 102]
Length = 217
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 82/136 (60%), Gaps = 14/136 (10%)
Query: 9 SFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQI 68
S S + + + +GDI++ +D AIV+ N LL GG AIH AAGP+L C+ I
Sbjct: 38 STSINSRVGLIRGDITKLQLD----AIVNAANTTLLGGGGVDGAIHRAAGPELLHDCHGI 93
Query: 69 PEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNP---EDILRSAYKNCLSVGK 125
C G+AR+T G++LP HVIHTVGP+++ H +P E++LRS Y+ L +
Sbjct: 94 GG------CSTGDARLTGGYELPAKHVIHTVGPIYD-HRHPQTSENLLRSCYETSLGLAV 146
Query: 126 ANNIQYIAFPAISCGV 141
++ I+ +AF AIS GV
Sbjct: 147 SSGIKTLAFSAISTGV 162
>gi|334351256|sp|B7LT90.2|YMDB_ESCF3 RecName: Full=O-acetyl-ADP-ribose deacetylase; AltName:
Full=Regulator of RNase III activity
Length = 177
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 75/130 (57%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K+ + + +GDI++ VD IV+ N L+ GG AIH AAGP+L +AC ++ Q
Sbjct: 2 KSRIHVLQGDITQLAVD----VIVNAANSSLMGGGGVDGAIHRAAGPELLEACQKVRRQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQY 131
CP G A IT LP VIHTVGPV+ + N + +L AY N L + +AN +
Sbjct: 58 G--ECPTGHAVITIAGNLPARAVIHTVGPVWRDGEHNEDQLLHDAYLNSLKLAQANGYKS 115
Query: 132 IAFPAISCGV 141
IAFPAIS GV
Sbjct: 116 IAFPAISTGV 125
>gi|422805230|ref|ZP_16853662.1| macro domain-containing protein [Escherichia fergusonii B253]
gi|424816623|ref|ZP_18241774.1| hypothetical protein ECD227_1740 [Escherichia fergusonii ECD227]
gi|324113843|gb|EGC07817.1| macro domain-containing protein [Escherichia fergusonii B253]
gi|325497643|gb|EGC95502.1| hypothetical protein ECD227_1740 [Escherichia fergusonii ECD227]
Length = 177
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 75/130 (57%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K+ + + +GDI++ VD IV+ N L+ GG AIH AAGP+L +AC ++ Q
Sbjct: 2 KSRIHVLQGDITQLAVD----VIVNAANSSLMGGGGVDGAIHRAAGPELLEACQKVRRQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQY 131
CP G A IT LP VIHTVGPV+ + N + +L AY N L + +AN +
Sbjct: 58 G--ECPTGHAVITIAGNLPARAVIHTVGPVWRDGEHNEDQLLHDAYLNSLKLAQANGYKS 115
Query: 132 IAFPAISCGV 141
IAFPAIS GV
Sbjct: 116 IAFPAISTGV 125
>gi|346314967|ref|ZP_08856483.1| hypothetical protein HMPREF9022_02140 [Erysipelotrichaceae
bacterium 2_2_44A]
gi|345905067|gb|EGX74807.1| hypothetical protein HMPREF9022_02140 [Erysipelotrichaceae
bacterium 2_2_44A]
Length = 168
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 77/127 (60%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+KI GDI+ VD AIV+ N LL GG AIH AAGP+L + C +
Sbjct: 3 IKILSGDITTLQVD----AIVNAANVSLLGGGGVDGAIHRAAGPELLEECRTLH------ 52
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
C GEA+IT G++LP S+VIHT GP++ + E ++L S Y++C+ + K N+I IAF
Sbjct: 53 GCKTGEAKITKGYRLPCSYVIHTPGPIWQGGNHGECELLESCYRSCMKLAKENHITSIAF 112
Query: 135 PAISCGV 141
PAIS GV
Sbjct: 113 PAISTGV 119
>gi|205353114|ref|YP_002226915.1| hypothetical protein SG1975 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|334351231|sp|B5RBF3.1|YMDB_SALG2 RecName: Full=O-acetyl-ADP-ribose deacetylase; AltName:
Full=Regulator of RNase III activity
gi|205272895|emb|CAR37825.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
Length = 179
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 77/129 (59%), Gaps = 7/129 (5%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
+ L++ +GDI++ VD AIV+ N L+ GG AIH AAGP L AC I + Q
Sbjct: 3 SRLQVIQGDITQLSVD----AIVNAANASLMGGGGVDGAIHRAAGPALLDACKLIRQQQG 58
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
C G A ITP KL VIHTVGPV+ + E ++L AY++CL + +AN+ + I
Sbjct: 59 E--CQTGHAVITPAGKLSAKAVIHTVGPVWRGGEHQEAELLEEAYRSCLLLAEANHFRSI 116
Query: 133 AFPAISCGV 141
AFPAIS GV
Sbjct: 117 AFPAISTGV 125
>gi|219848823|ref|YP_002463256.1| Appr-1-p processing protein [Chloroflexus aggregans DSM 9485]
gi|219543082|gb|ACL24820.1| Appr-1-p processing domain protein [Chloroflexus aggregans DSM
9485]
Length = 184
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 79/132 (59%), Gaps = 13/132 (9%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGP-DLQKACYQIPEA 71
+ +++ +GDI V +S DAIV+ NE L GG AI AAG DLQ+AC +
Sbjct: 11 QARIELCEGDI----VTQSVDAIVNAANEQLRQGGGVCGAIFRAAGAADLQRACDAVAP- 65
Query: 72 QPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE--DILRSAYKNCLSVGKANNI 129
CP GEARITPGF LP +VIH VGP+F+ + E +L SAY+ L++ + +
Sbjct: 66 -----CPTGEARITPGFALPARYVIHAVGPIFDSYSPTEADRLLVSAYRASLALARQYGV 120
Query: 130 QYIAFPAISCGV 141
+ IAFP+I+ G+
Sbjct: 121 RSIAFPSIATGI 132
>gi|90961195|ref|YP_535111.1| ATPase associated with chromosome architecture/replication
[Lactobacillus salivarius UCC118]
gi|90820389|gb|ABD99028.1| ATPase associated with chromosome architecture/replication
[Lactobacillus salivarius UCC118]
Length = 459
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 79/132 (59%), Gaps = 10/132 (7%)
Query: 11 STKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPE 70
KT +++ K DI++ VD + DAIV+ N LL GG AIH AGP L K C Q+
Sbjct: 283 DNKTKIRLLKADITK--VD-NVDAIVNAANTSLLGGGGVDGAIHRVAGPLLLKECRQLN- 338
Query: 71 AQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFN-FHCNPEDILRSAYKNCLSVGKANNI 129
C G+A+IT G+ LPV +VIHTVGP++ + + +L + Y+N L + + NI
Sbjct: 339 -----GCEVGQAKITSGYNLPVEYVIHTVGPIWKGGNADESQLLVACYRNSLRLAQKCNI 393
Query: 130 QYIAFPAISCGV 141
+ IAFPAIS G+
Sbjct: 394 RKIAFPAISTGI 405
>gi|417809190|ref|ZP_12455872.1| Appr-1-p processing protein [Lactobacillus salivarius GJ-24]
gi|335351146|gb|EGM52640.1| Appr-1-p processing protein [Lactobacillus salivarius GJ-24]
Length = 459
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 79/132 (59%), Gaps = 10/132 (7%)
Query: 11 STKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPE 70
KT +++ K DI++ VD + DAIV+ N LL GG AIH AGP L K C Q+
Sbjct: 283 DNKTKIRLLKADITK--VD-NVDAIVNAANTSLLGGGGVDGAIHRVAGPLLLKECRQLN- 338
Query: 71 AQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFN-FHCNPEDILRSAYKNCLSVGKANNI 129
C G+A+IT G+ LPV +VIHTVGP++ + + +L + Y+N L + + NI
Sbjct: 339 -----GCEVGQAKITSGYNLPVEYVIHTVGPIWKGGNADESQLLAACYRNSLHLAQKCNI 393
Query: 130 QYIAFPAISCGV 141
+ IAFPAIS G+
Sbjct: 394 RKIAFPAISTGI 405
>gi|423107771|ref|ZP_17095466.1| hypothetical protein HMPREF9687_01017 [Klebsiella oxytoca 10-5243]
gi|376386504|gb|EHS99215.1| hypothetical protein HMPREF9687_01017 [Klebsiella oxytoca 10-5243]
Length = 184
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 70/122 (57%), Gaps = 7/122 (5%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPG 80
GDI+ VD IV+ N LL GG AIH AAGPDL AC + + Q CPPG
Sbjct: 10 GDITTLAVD----VIVNAANPSLLGGGGVDGAIHRAAGPDLLAACKVVRQQQGE--CPPG 63
Query: 81 EARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISC 139
A IT LP S VIH VGP+++ E ++L AYKN L + ANN + IAFPAIS
Sbjct: 64 HAVITTAGNLPASAVIHAVGPIWHGGDRQEAELLADAYKNSLQLASANNYRSIAFPAIST 123
Query: 140 GV 141
GV
Sbjct: 124 GV 125
>gi|385840000|ref|YP_005863324.1| ATPase associated with chromosome architecture/replication
[Lactobacillus salivarius CECT 5713]
gi|300214121|gb|ADJ78537.1| ATPase associated with chromosome architecture/replication
[Lactobacillus salivarius CECT 5713]
Length = 459
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 79/132 (59%), Gaps = 10/132 (7%)
Query: 11 STKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPE 70
KT +++ K DI++ VD + DAIV+ N LL GG AIH AGP L K C Q+
Sbjct: 283 DNKTKIRLLKADITK--VD-NVDAIVNAANTSLLGGGGVDGAIHRVAGPLLLKECRQLN- 338
Query: 71 AQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFN-FHCNPEDILRSAYKNCLSVGKANNI 129
C G+A+IT G+ LPV +VIHTVGP++ + + +L + Y+N L + + NI
Sbjct: 339 -----GCEVGQAKITSGYNLPVEYVIHTVGPIWKGGNADESQLLAACYRNSLHLAQKCNI 393
Query: 130 QYIAFPAISCGV 141
+ IAFPAIS G+
Sbjct: 394 RKIAFPAISTGI 405
>gi|227891865|ref|ZP_04009670.1| Appr-1-p processing protein [Lactobacillus salivarius ATCC 11741]
gi|227866328|gb|EEJ73749.1| Appr-1-p processing protein [Lactobacillus salivarius ATCC 11741]
Length = 462
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 79/132 (59%), Gaps = 10/132 (7%)
Query: 11 STKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPE 70
KT +++ K DI++ VD + DAIV+ N LL GG AIH AGP L K C Q+
Sbjct: 286 DNKTKIRLLKADITK--VD-NVDAIVNAANTSLLGGGGVDGAIHRVAGPLLLKECRQLN- 341
Query: 71 AQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFN-FHCNPEDILRSAYKNCLSVGKANNI 129
C G+A+IT G+ LPV +VIHTVGP++ + + +L + Y+N L + + NI
Sbjct: 342 -----GCEVGQAKITSGYNLPVEYVIHTVGPIWKGGNADESQLLAACYRNSLHLAQKCNI 396
Query: 130 QYIAFPAISCGV 141
+ IAFPAIS G+
Sbjct: 397 RKIAFPAISTGI 408
>gi|336391843|ref|ZP_08573242.1| hypothetical protein LcortK3_03537 [Lactobacillus coryniformis
subsp. torquens KCTC 3535]
Length = 168
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 76/127 (59%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++I +GDI++ VD AIV+ N LL GG AIH AAGP+L AC Q+
Sbjct: 2 IQIIQGDITQMQVD----AIVNAANTTLLGGGGVDGAIHRAAGPELLAACRQLHG----- 52
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
C GEA+IT GF+LP VIHT GP++ E +L+ +Y N L++ A++ Q +AF
Sbjct: 53 -CATGEAKITAGFRLPAKFVIHTPGPIWRDGTQSEAQLLQRSYANSLALAAAHDCQTVAF 111
Query: 135 PAISCGV 141
P+IS GV
Sbjct: 112 PSISTGV 118
>gi|301300815|ref|ZP_07206996.1| macro domain protein [Lactobacillus salivarius ACS-116-V-Col5a]
gi|300851591|gb|EFK79294.1| macro domain protein [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 459
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 79/132 (59%), Gaps = 10/132 (7%)
Query: 11 STKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPE 70
KT +++ K DI++ VD + DAIV+ N LL GG AIH AGP L K C Q+
Sbjct: 283 DNKTKIRLLKADITK--VD-NVDAIVNAANTSLLGGGGVDGAIHRVAGPLLLKECRQLN- 338
Query: 71 AQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFN-FHCNPEDILRSAYKNCLSVGKANNI 129
C G+A+IT G+ LPV +VIHTVGP++ + + +L + Y+N L + + NI
Sbjct: 339 -----GCEVGQAKITSGYNLPVEYVIHTVGPIWKGGNADESQLLAACYRNSLHLAQKCNI 393
Query: 130 QYIAFPAISCGV 141
+ IAFPAIS G+
Sbjct: 394 RKIAFPAISTGI 405
>gi|434402962|ref|YP_007145847.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Cylindrospermum stagnale PCC 7417]
gi|428257217|gb|AFZ23167.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Cylindrospermum stagnale PCC 7417]
Length = 170
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 75/126 (59%), Gaps = 11/126 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++I +GDI++ VD AIV+ NE L+ GG AIH AAGP L + C QI
Sbjct: 2 IEIIEGDITQLAVD----AIVNAANEELMTGGGVCGAIHRAAGPGLWEECRQIR------ 51
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAF 134
C PG A+IT G+ LP VIHTVGPV++ ED +L S Y++ L++ I+ IAF
Sbjct: 52 GCEPGAAKITKGYNLPAKWVIHTVGPVWSGGNYDEDEVLASCYRHSLALANEYQIKTIAF 111
Query: 135 PAISCG 140
PAIS G
Sbjct: 112 PAISTG 117
>gi|289208241|ref|YP_003460307.1| Appr-1-p processing domain-containing protein [Thioalkalivibrio sp.
K90mix]
gi|288943872|gb|ADC71571.1| Appr-1-p processing domain protein [Thioalkalivibrio sp. K90mix]
Length = 163
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 74/127 (58%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ + +GDI+ VD AIV+ NE LL GG AIH AAGP+L + I
Sbjct: 2 ISVVQGDITTLEVD----AIVNAANESLLGGGGVDGAIHRAAGPELLEVTRAIGG----- 52
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAF 134
CP G+ARITPGF+LP ++IHTVGPV+ ED +L S Y++ L + + + +AF
Sbjct: 53 -CPTGDARITPGFRLPAEYIIHTVGPVWQGGQADEDTLLASCYRSSLELAQEYGLSEVAF 111
Query: 135 PAISCGV 141
P IS GV
Sbjct: 112 PLISTGV 118
>gi|417787227|ref|ZP_12434910.1| Macro domain, possibly ADP-ribose binding module [Lactobacillus
salivarius NIAS840]
gi|334307404|gb|EGL98390.1| Macro domain, possibly ADP-ribose binding module [Lactobacillus
salivarius NIAS840]
Length = 459
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/132 (43%), Positives = 78/132 (59%), Gaps = 10/132 (7%)
Query: 11 STKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPE 70
KT +++ K DI++ VD + DAIV+ N LL GG AIH AGP L K C Q+
Sbjct: 283 DNKTKIRLLKADITK--VD-NVDAIVNAANTSLLGGGGVDGAIHRVAGPLLLKECRQLN- 338
Query: 71 AQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSA-YKNCLSVGKANNI 129
C G+A+IT G+ LPV +VIHTVGP++ E L +A Y+N L + + NI
Sbjct: 339 -----GCEVGQAKITSGYNLPVEYVIHTVGPIWKGGNTDESQLLAACYRNSLHLAQKCNI 393
Query: 130 QYIAFPAISCGV 141
+ IAFPAIS G+
Sbjct: 394 RKIAFPAISTGI 405
>gi|392950123|ref|ZP_10315681.1| DNA/RNA unwinding protein [Lactobacillus pentosus KCA1]
gi|392434694|gb|EIW12660.1| DNA/RNA unwinding protein [Lactobacillus pentosus KCA1]
Length = 172
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 74/127 (58%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+K+ GDI++ VD AIV+ N LL GG AIH AAGP+L AC +P
Sbjct: 4 IKVIHGDITKMAVD----AIVNAANTSLLGGGGVDGAIHRAAGPELLAAC------RPLH 53
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
C GEA+ITPGF+LP VIHT GPV+ E +L ++Y+N L++ N +AF
Sbjct: 54 GCATGEAKITPGFRLPAKFVIHTPGPVWQGGQRDELRLLANSYRNSLNLAAENGCHTVAF 113
Query: 135 PAISCGV 141
P+IS GV
Sbjct: 114 PSISTGV 120
>gi|23099743|ref|NP_693209.1| hypothetical protein OB2288 [Oceanobacillus iheyensis HTE831]
gi|22777973|dbj|BAC14244.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 185
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 91/167 (54%), Gaps = 9/167 (5%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
+L+I GDI++ +++ IV+ N LL GG AIH AAGP+L KAC ++ +
Sbjct: 8 NTLEIVVGDITK----ETTNVIVNAANGSLLGGGGVDGAIHHAAGPELLKACQEMRNNEL 63
Query: 74 R-VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCN-PEDILRSAYKNCLSVGKANNIQY 131
P GE IT GF+LP +IHTVGP++N + E++L + Y+N L + K +
Sbjct: 64 NGEELPTGEVIITSGFQLPSRFIIHTVGPIWNQTPDLQEELLANCYRNALELVKVKKLSS 123
Query: 132 IAFPAISCGVSQIMTH---AIKLQTNCGFLESFWVELSAKVTTYDMD 175
I+FP+IS GV H AI LQT FL+ V L V + D
Sbjct: 124 ISFPSISTGVYGYPIHEAAAIALQTIIQFLQENDVGLVKVVLFSERD 170
>gi|298376136|ref|ZP_06986092.1| appr-1-p processing enzyme domain protein [Bacteroides sp. 3_1_19]
gi|298267173|gb|EFI08830.1| appr-1-p processing enzyme domain protein [Bacteroides sp. 3_1_19]
Length = 186
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 67/111 (60%), Gaps = 9/111 (8%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAGP+L C + CP GEA+IT G++L
Sbjct: 29 DAIVNAANNSLLGGGGVDGAIHWAAGPELLDECRTLQG------CPTGEAKITKGYRLKA 82
Query: 93 SHVIHTVGPVFNF--HCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
HVIHTVGP++ H PE +L + Y+N L + K N ++ IAFP+IS GV
Sbjct: 83 RHVIHTVGPIYRNGQHGEPE-LLENCYRNSLRLAKENRLRTIAFPSISTGV 132
>gi|213419242|ref|ZP_03352308.1| hypothetical protein Salmonentericaenterica_16044 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 174
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 75/126 (59%), Gaps = 7/126 (5%)
Query: 17 KISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVR 76
++ +GDI++ VD AIV+ N L+ GG AIH AAGP L AC I + Q
Sbjct: 1 QVIQGDITQLSVD----AIVNAANASLMGGGGVDGAIHRAAGPALLDACKLIRQQQGE-- 54
Query: 77 CPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFP 135
C G A ITP KL VIHTVGPV+ + E ++L AY+NCL + +AN+ + IAFP
Sbjct: 55 CQTGHAVITPAGKLSAKAVIHTVGPVWRGGEHQEAELLEEAYRNCLLLAEANHFRSIAFP 114
Query: 136 AISCGV 141
AIS GV
Sbjct: 115 AISTGV 120
>gi|84686420|ref|ZP_01014314.1| predicted phosphatase [Maritimibacter alkaliphilus HTCC2654]
gi|84665603|gb|EAQ12079.1| predicted phosphatase [Rhodobacterales bacterium HTCC2654]
Length = 166
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 65/110 (59%), Gaps = 7/110 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ NE LL GG AIH AAGP L C +I CP GEARIT G+ LP
Sbjct: 16 DAIVNAANETLLGGGGVDGAIHRAAGPGLLDECRKIGG------CPTGEARITGGYDLPA 69
Query: 93 SHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
HVIHTVGPV++ E D+L + Y+ L + + + IAFPAIS GV
Sbjct: 70 RHVIHTVGPVWHGGDRGEPDLLAACYRESLRLARESGCGSIAFPAISTGV 119
>gi|352090456|ref|ZP_08954505.1| Appr-1-p processing domain protein [Rhodanobacter sp. 2APBS1]
gi|351676829|gb|EHA59981.1| Appr-1-p processing domain protein [Rhodanobacter sp. 2APBS1]
Length = 173
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/127 (48%), Positives = 80/127 (62%), Gaps = 5/127 (3%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+K+ DI+R + DAIV+ N LL GG AIH AAGP L +AC +PE+ V
Sbjct: 3 IKVVHADITRL----APDAIVNAANPGLLGGGGVDGAIHRAAGPALLQACRALPESATGV 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
RCP GEARITPGF LP VIHTVGPV++ E ++L ++N L + + ++ IAF
Sbjct: 59 RCPIGEARITPGFALPARWVIHTVGPVWHGGDEGEAELLARCHRNALRLLRERALRTIAF 118
Query: 135 PAISCGV 141
PAISCGV
Sbjct: 119 PAISCGV 125
>gi|320530350|ref|ZP_08031415.1| RNase III regulator YmdB [Selenomonas artemidis F0399]
gi|320137410|gb|EFW29327.1| RNase III regulator YmdB [Selenomonas artemidis F0399]
Length = 179
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 75/131 (57%), Gaps = 10/131 (7%)
Query: 11 STKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPE 70
++K + GDI+ VD AIV+ N LL GG AIH AAG +L C +
Sbjct: 8 ASKNEVVYVVGDITTLAVD----AIVNAANRSLLGGGGVDGAIHRAAGRELLAECRTLGG 63
Query: 71 AQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQ 130
C G A+IT G++LP +VIHTVGPV++ + ++LRS Y++ L + +A+ +
Sbjct: 64 ------CETGAAKITKGYRLPAHYVIHTVGPVYSGSASDAELLRSCYRSALDLARAHGLH 117
Query: 131 YIAFPAISCGV 141
IAFPAIS GV
Sbjct: 118 TIAFPAISTGV 128
>gi|110633277|ref|YP_673485.1| Appr-1-p processing [Chelativorans sp. BNC1]
gi|110284261|gb|ABG62320.1| Appr-1-p processing [Chelativorans sp. BNC1]
Length = 174
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 80/144 (55%), Gaps = 14/144 (9%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPG 80
GDI++ +DAIV+ N LL GG AIH AAGP+L + C ++ C G
Sbjct: 12 GDITKI----EADAIVNAANRSLLGGGGVDGAIHRAAGPELLEECRKLGG------CETG 61
Query: 81 EARITPGFKLPVSHVIHTVGPVFN-FHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISC 139
+ARIT ++LP HVIHTVGPV++ H D+L S Y+ L + + + + +AFPAIS
Sbjct: 62 DARITKAYRLPARHVIHTVGPVWHGGHEGEADLLASCYRRSLELARDHGCKSVAFPAIST 121
Query: 140 GVS---QIMTHAIKLQTNCGFLES 160
GV + I +QT FLE
Sbjct: 122 GVYGYPKDQAARIAVQTVAEFLEG 145
>gi|375260216|ref|YP_005019386.1| RNase III inhibitor [Klebsiella oxytoca KCTC 1686]
gi|397657296|ref|YP_006497998.1| macro domain-containing protein [Klebsiella oxytoca E718]
gi|365909694|gb|AEX05147.1| RNase III inhibitor [Klebsiella oxytoca KCTC 1686]
gi|394343360|gb|AFN29481.1| Macro domain protein [Klebsiella oxytoca E718]
Length = 184
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 80/149 (53%), Gaps = 10/149 (6%)
Query: 17 KISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVR 76
++ GDI+R VD IV+ N LL GG AIH AAGP+L AC + + Q
Sbjct: 6 EVVLGDITRLEVD----VIVNAANPSLLGGGGVDGAIHRAAGPELLAACKVVRQQQGE-- 59
Query: 77 CPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFP 135
CPPG A IT LP S VIH VGPV++ E ++L YKN L + ANN + IAFP
Sbjct: 60 CPPGHAVITAAGNLPASAVIHAVGPVWHGGDRQEAELLADVYKNSLLLASANNYRSIAFP 119
Query: 136 AISCGVSQIMTHA---IKLQTNCGFLESF 161
AIS GV A I ++T FL +
Sbjct: 120 AISTGVYGYPKQAAAEIAVRTVTAFLTRY 148
>gi|418960637|ref|ZP_13512524.1| ATPase associated with chromosome architecture/replication
[Lactobacillus salivarius SMXD51]
gi|380344304|gb|EIA32650.1| ATPase associated with chromosome architecture/replication
[Lactobacillus salivarius SMXD51]
Length = 459
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 78/132 (59%), Gaps = 10/132 (7%)
Query: 11 STKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPE 70
KT +++ K DI++ VD + DAIV+ N LL GG AIH AGP L K C Q+
Sbjct: 283 DNKTKIRLLKADITK--VD-NVDAIVNAANTSLLGGGGVDGAIHRVAGPLLLKECRQLN- 338
Query: 71 AQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNI 129
C G+A+IT G+ LPV +VIHTVGP++ E +L + Y+N L + + NI
Sbjct: 339 -----GCEVGQAKITSGYNLPVEYVIHTVGPIWKGGNTDEPQLLAACYRNSLHLAQKCNI 393
Query: 130 QYIAFPAISCGV 141
+ IAFPAIS G+
Sbjct: 394 RKIAFPAISTGI 405
>gi|423102464|ref|ZP_17090166.1| hypothetical protein HMPREF9686_01070 [Klebsiella oxytoca 10-5242]
gi|376387940|gb|EHT00641.1| hypothetical protein HMPREF9686_01070 [Klebsiella oxytoca 10-5242]
Length = 184
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 80/149 (53%), Gaps = 10/149 (6%)
Query: 17 KISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVR 76
++ GDI+R VD IV+ N LL GG AIH AAGP+L AC + + Q
Sbjct: 6 EVVLGDITRLEVD----VIVNAANPSLLGGGGVDGAIHRAAGPELLAACKVVRQQQGE-- 59
Query: 77 CPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFP 135
CPPG A IT LP S VIH VGPV++ E ++L YKN L + ANN + IAFP
Sbjct: 60 CPPGHAVITAAGNLPASAVIHAVGPVWHGGDRQEAELLADVYKNSLLLASANNYRSIAFP 119
Query: 136 AISCGVSQIMTHA---IKLQTNCGFLESF 161
AIS GV A I ++T FL +
Sbjct: 120 AISTGVYGYPKQAAAEIAVRTVTAFLTRY 148
>gi|372267680|ref|ZP_09503728.1| Appr-1-p processing protein [Alteromonas sp. S89]
Length = 170
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 73/127 (57%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ GDI+R VD IV+ N+ LL GG AIH AAGP L +AC I
Sbjct: 2 IEVHLGDITRLHVD----VIVNAANQRLLGGGGVDGAIHRAAGPALLEACRAIGG----- 52
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
CP GE R T G+ LPV + HTVGPV+ + ++L S Y+ CL++ + N +AF
Sbjct: 53 -CPVGEVRATQGYGLPVKRIYHTVGPVWRGGNLGEPELLASCYRQCLNLARRENAHTLAF 111
Query: 135 PAISCGV 141
PAISCGV
Sbjct: 112 PAISCGV 118
>gi|449061505|ref|ZP_21738919.1| RNase III inhibitor [Klebsiella pneumoniae hvKP1]
gi|448872975|gb|EMB08103.1| RNase III inhibitor [Klebsiella pneumoniae hvKP1]
Length = 175
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 78/145 (53%), Gaps = 10/145 (6%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPG 80
GDI+ VD IV+ N LL GG AIH AAGP L AC Q+ + Q CPPG
Sbjct: 10 GDITTLDVD----VIVNAANPSLLGGGGVDGAIHRAAGPALLAACKQVLQQQGE--CPPG 63
Query: 81 EARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISC 139
A IT LP S VIHTVGPV++ E L AYKN L + ANN + IAFPAIS
Sbjct: 64 HAVITIAGNLPASAVIHTVGPVWHGGDRMEAQTLADAYKNSLQLASANNYRSIAFPAIST 123
Query: 140 GV---SQIMTHAIKLQTNCGFLESF 161
GV + AI ++T FL +
Sbjct: 124 GVYGYPKEEAAAIAVRTVTAFLTRY 148
>gi|365139597|ref|ZP_09345944.1| UPF0189 protein ymdB [Klebsiella sp. 4_1_44FAA]
gi|378978095|ref|YP_005226236.1| hypothetical protein KPHS_19360 [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|402781421|ref|YP_006636967.1| hypothetical protein A79E_3172 [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|419971803|ref|ZP_14487233.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|419980842|ref|ZP_14496123.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|419986096|ref|ZP_14501232.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|419989666|ref|ZP_14504641.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|419994914|ref|ZP_14509722.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|420003984|ref|ZP_14518625.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|420009738|ref|ZP_14524219.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|420014711|ref|ZP_14529016.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|420018967|ref|ZP_14533162.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|420026678|ref|ZP_14540678.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|420031460|ref|ZP_14545281.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|420038241|ref|ZP_14551889.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|420044280|ref|ZP_14557761.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|420050216|ref|ZP_14563518.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|420055593|ref|ZP_14568758.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|420062592|ref|ZP_14575559.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|420066149|ref|ZP_14578951.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|420070753|ref|ZP_14583403.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|420078997|ref|ZP_14591449.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|420083253|ref|ZP_14595537.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|421909182|ref|ZP_16339004.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Klebsiella pneumoniae subsp. pneumoniae ST258-K26BO]
gi|421913859|ref|ZP_16343523.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Klebsiella pneumoniae subsp. pneumoniae ST258-K28BO]
gi|425090946|ref|ZP_18494031.1| UPF0189 protein ymdB [Klebsiella pneumoniae subsp. pneumoniae
WGLW5]
gi|428148936|ref|ZP_18996777.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Klebsiella pneumoniae subsp. pneumoniae ST512-K30BO]
gi|428939486|ref|ZP_19012594.1| RNase III inhibitor [Klebsiella pneumoniae VA360]
gi|363654210|gb|EHL93125.1| UPF0189 protein ymdB [Klebsiella sp. 4_1_44FAA]
gi|364517506|gb|AEW60634.1| hypothetical protein KPHS_19360 [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|397344551|gb|EJJ37683.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|397349463|gb|EJJ42557.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|397352741|gb|EJJ45819.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|397367431|gb|EJJ60042.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|397368687|gb|EJJ61292.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|397369165|gb|EJJ61767.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|397377727|gb|EJJ69953.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|397380696|gb|EJJ72875.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|397389628|gb|EJJ81561.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|397394710|gb|EJJ86431.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|397400329|gb|EJJ91974.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|397404394|gb|EJJ95902.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|397411811|gb|EJK03060.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|397412047|gb|EJK03287.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|397421446|gb|EJK12458.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|397427611|gb|EJK18378.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|397430419|gb|EJK21114.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|397441257|gb|EJK31637.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|397444303|gb|EJK34586.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|397451344|gb|EJK41430.1| RNase III inhibitor [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|402539208|gb|AFQ63357.1| hypothetical protein A79E_3172 [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|405613103|gb|EKB85851.1| UPF0189 protein ymdB [Klebsiella pneumoniae subsp. pneumoniae
WGLW5]
gi|410117026|emb|CCM81629.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Klebsiella pneumoniae subsp. pneumoniae ST258-K26BO]
gi|410123840|emb|CCM86148.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Klebsiella pneumoniae subsp. pneumoniae ST258-K28BO]
gi|426303928|gb|EKV66085.1| RNase III inhibitor [Klebsiella pneumoniae VA360]
gi|427541112|emb|CCM92915.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Klebsiella pneumoniae subsp. pneumoniae ST512-K30BO]
Length = 175
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 78/145 (53%), Gaps = 10/145 (6%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPG 80
GDI+ VD IV+ N LL GG AIH AAGP L AC Q+ + Q CPPG
Sbjct: 10 GDITTLDVD----VIVNAANPSLLGGGGVDGAIHRAAGPALLAACKQVLQQQGE--CPPG 63
Query: 81 EARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISC 139
A IT LP S VIHTVGPV++ E L AYKN L + ANN + IAFPAIS
Sbjct: 64 HAVITIAGNLPASAVIHTVGPVWHGGDRMEAQTLADAYKNSLQLASANNYRSIAFPAIST 123
Query: 140 GV---SQIMTHAIKLQTNCGFLESF 161
GV + AI ++T FL +
Sbjct: 124 GVYGYPREEAAAIAVRTVTAFLTRY 148
>gi|420146523|ref|ZP_14653932.1| Appr-1-p processing domain protein [Lactobacillus coryniformis
subsp. coryniformis CECT 5711]
gi|398401727|gb|EJN55185.1| Appr-1-p processing domain protein [Lactobacillus coryniformis
subsp. coryniformis CECT 5711]
Length = 168
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 76/127 (59%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++I +GDI++ VD AIV+ N LL GG AIH AAGP+L AC Q+
Sbjct: 2 IQIIQGDITQMQVD----AIVNAANTTLLGGGGVDGAIHRAAGPELLAACRQLHG----- 52
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
C GEA+IT GF+LP VIHT GP++ E +L ++Y N L++ A++ Q +AF
Sbjct: 53 -CATGEAKITAGFRLPAKFVIHTPGPIWRDGTQSEAQLLHNSYANSLALAAAHDCQTVAF 111
Query: 135 PAISCGV 141
P+IS GV
Sbjct: 112 PSISTGV 118
>gi|424934072|ref|ZP_18352444.1| Hypothetical protein B819_145214 [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|407808259|gb|EKF79510.1| Hypothetical protein B819_145214 [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
Length = 181
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 78/145 (53%), Gaps = 10/145 (6%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPG 80
GDI+ VD IV+ N LL GG AIH AAGP L AC Q+ + Q CPPG
Sbjct: 16 GDITTLDVD----VIVNAANPSLLGGGGVDGAIHRAAGPALLAACKQVLQQQGE--CPPG 69
Query: 81 EARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISC 139
A IT LP S VIHTVGPV++ E L AYKN L + ANN + IAFPAIS
Sbjct: 70 HAVITIAGNLPASAVIHTVGPVWHGGDRMEAQTLADAYKNSLQLASANNYRSIAFPAIST 129
Query: 140 GV---SQIMTHAIKLQTNCGFLESF 161
GV + AI ++T FL +
Sbjct: 130 GVYGYPKEEAAAIAVRTVTAFLTRY 154
>gi|365854030|ref|ZP_09394281.1| macro domain protein [Lactobacillus parafarraginis F0439]
gi|363711388|gb|EHL95121.1| macro domain protein [Lactobacillus parafarraginis F0439]
Length = 168
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 81/145 (55%), Gaps = 19/145 (13%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
I KGDI++ VD AIV+ N L GG AIH AAGP L +AC ++
Sbjct: 4 FNIIKGDITQMHVD----AIVNAANTALSGGGGVDGAIHRAAGPQLDEACRKLN------ 53
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFN-FHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
CP GEA++TPGF LP VIHT GP+++ H N ++L ++Y+N L N+ +AF
Sbjct: 54 GCPTGEAKVTPGFNLPAKFVIHTPGPIWHGGHQNEPELLANSYRNSLKRAVENDCHTVAF 113
Query: 135 PAISCGV--------SQIMTHAIKL 151
P+IS G+ ++I H I++
Sbjct: 114 PSISTGIFDFPLNQAAKIAIHEIQM 138
>gi|152969614|ref|YP_001334723.1| hypothetical protein KPN_01060 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|386034241|ref|YP_005954154.1| RNase III inhibitor [Klebsiella pneumoniae KCTC 2242]
gi|424830037|ref|ZP_18254765.1| Appr-1-p processing enzyme domain protein [Klebsiella pneumoniae
subsp. pneumoniae Ecl8]
gi|425077298|ref|ZP_18480401.1| hypothetical protein HMPREF1305_03211 [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425080884|ref|ZP_18483981.1| hypothetical protein HMPREF1306_01632 [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|425087931|ref|ZP_18491024.1| hypothetical protein HMPREF1307_03380 [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|428933871|ref|ZP_19007411.1| RNase III inhibitor [Klebsiella pneumoniae JHCK1]
gi|428937273|ref|ZP_19010584.1| RNase III inhibitor [Klebsiella pneumoniae JHCK1]
gi|150954463|gb|ABR76493.1| hypothetical protein KPN_01060 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|339761369|gb|AEJ97589.1| RNase III inhibitor [Klebsiella pneumoniae KCTC 2242]
gi|405593007|gb|EKB66459.1| hypothetical protein HMPREF1305_03211 [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405604655|gb|EKB77776.1| hypothetical protein HMPREF1307_03380 [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|405604694|gb|EKB77801.1| hypothetical protein HMPREF1306_01632 [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|414707462|emb|CCN29166.1| Appr-1-p processing enzyme domain protein [Klebsiella pneumoniae
subsp. pneumoniae Ecl8]
gi|426296620|gb|EKV59223.1| RNase III inhibitor [Klebsiella pneumoniae JHCK1]
gi|426304206|gb|EKV66356.1| RNase III inhibitor [Klebsiella pneumoniae JHCK1]
Length = 175
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 78/145 (53%), Gaps = 10/145 (6%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPG 80
GDI+ VD IV+ N LL GG AIH AAGP L AC Q+ + Q CPPG
Sbjct: 10 GDITTLDVD----VIVNAANPSLLGGGGVDGAIHRAAGPALLAACKQVLQQQGE--CPPG 63
Query: 81 EARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISC 139
A IT LP S VIHTVGPV++ E L AYKN L + ANN + IAFPAIS
Sbjct: 64 HAVITIAGNLPASAVIHTVGPVWHGGDRMEAQTLADAYKNSLQLASANNYRSIAFPAIST 123
Query: 140 GV---SQIMTHAIKLQTNCGFLESF 161
GV + AI ++T FL +
Sbjct: 124 GVYGYPKEEAAAIAVRTVTAFLTRY 148
>gi|374308214|ref|YP_005054645.1| appr-1-p processing enzyme domain protein [Filifactor alocis ATCC
35896]
gi|291165704|gb|EFE27752.1| appr-1-p processing enzyme domain protein [Filifactor alocis ATCC
35896]
Length = 192
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 75/127 (59%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+I + DI+ VD AIV+ N+ LL GG AIH AGP+L K C +
Sbjct: 28 FRIIQNDITTMKVD----AIVNAANKTLLGGGGVDGAIHRCAGPELLKECRTLHG----- 78
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C GEA+IT G++LP S+VIHTVGP++ + N +L AY+N L + K ++++ IAF
Sbjct: 79 -CETGEAKITKGYRLPASYVIHTVGPIYVDGKHNERQLLTRAYRNSLHLAKKHHLRSIAF 137
Query: 135 PAISCGV 141
P IS GV
Sbjct: 138 PLISSGV 144
>gi|20178229|sp|Q9HJ67.2|Y1105_THEAC RecName: Full=Uncharacterized protein Ta1105
Length = 196
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 74/126 (58%), Gaps = 5/126 (3%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L + GDI+ + ++AIV+ N L+ GG AIH AAGP+L +I +
Sbjct: 11 LAVEVGDIT----ESDAEAIVNAANSSLMGGGGVDGAIHSAAGPELNGELVKIRRERYPN 66
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
PPGEA IT G++L SH+IHTVGPV+ N E D+L +Y++CL + + I IAF
Sbjct: 67 GLPPGEAVITRGYRLKASHIIHTVGPVWMGGRNGEDDVLYRSYRSCLDLAREFGIHDIAF 126
Query: 135 PAISCG 140
PA+S G
Sbjct: 127 PALSTG 132
>gi|334351257|sp|D2TT52.2|YMDB_CITRI RecName: Full=O-acetyl-ADP-ribose deacetylase; AltName:
Full=Regulator of RNase III activity
Length = 177
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
+ + + GDI+ VD AIV+ N L+ GG AIH AAGP+L +AC + Q
Sbjct: 2 NSRIHVIHGDITTVAVD----AIVNAANPSLMGGGGVDGAIHRAAGPELLEACMTVRRQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQY 131
CPPG A IT +LP VIHTVGP++ N +L AY N L++ AN Q
Sbjct: 58 G--ECPPGHAVITAAGRLPAKAVIHTVGPIWRGGEHNEAQLLHDAYLNSLNLALANGYQS 115
Query: 132 IAFPAISCGV 141
IAFPAIS GV
Sbjct: 116 IAFPAISTGV 125
>gi|84502598|ref|ZP_01000717.1| hypothetical protein OB2597_00200 [Oceanicola batsensis HTCC2597]
gi|84388993|gb|EAQ01791.1| hypothetical protein OB2597_00200 [Oceanicola batsensis HTCC2597]
Length = 171
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 73/127 (57%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ +GDI+ VD AIV+ N LL GG AIH AAGP L + C +
Sbjct: 5 IRVWQGDITTLGVD----AIVNAANSSLLGGGGVDGAIHRAAGPGLVEECRTLGG----- 55
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
CP GEARIT G LP HVIHTVGPV+ E ++L + Y+N +++ + + IAF
Sbjct: 56 -CPTGEARITGGHDLPARHVIHTVGPVWQGGGRGEPELLAACYRNAMTLAEEAGARSIAF 114
Query: 135 PAISCGV 141
PAIS GV
Sbjct: 115 PAISTGV 121
>gi|238894096|ref|YP_002918830.1| hypothetical protein KP1_2047 [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|238546412|dbj|BAH62763.1| hypothetical protein KP1_2047 [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 181
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 78/145 (53%), Gaps = 10/145 (6%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPG 80
GDI+ VD IV+ N LL GG AIH AAGP L AC Q+ + Q CPPG
Sbjct: 16 GDITTLDVD----VIVNAANPSLLGGGGVDGAIHRAAGPALLAACKQVLQQQGE--CPPG 69
Query: 81 EARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISC 139
A IT LP S VIHTVGPV++ E L AYKN L + ANN + IAFPAIS
Sbjct: 70 HAVITIAGNLPASAVIHTVGPVWHGGDRMEAQTLADAYKNSLQLASANNYRSIAFPAIST 129
Query: 140 GV---SQIMTHAIKLQTNCGFLESF 161
GV + AI ++T FL +
Sbjct: 130 GVYGYPREEAAAIAVRTVTAFLTRY 154
>gi|423128562|ref|ZP_17116241.1| UPF0189 protein ymdB [Klebsiella oxytoca 10-5250]
gi|376393044|gb|EHT05705.1| UPF0189 protein ymdB [Klebsiella oxytoca 10-5250]
Length = 182
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 81/149 (54%), Gaps = 10/149 (6%)
Query: 17 KISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVR 76
++ GDI++ VD IV+ N LL GG AIH AAGP+L AC + + Q
Sbjct: 6 EVVLGDITKLAVD----VIVNAANPSLLGGGGVDGAIHRAAGPELLAACKVVRQQQGE-- 59
Query: 77 CPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFP 135
CPPG A IT LP S VIH VGP+++ E ++L AYKN L + ANN + IAFP
Sbjct: 60 CPPGHAVITAAGNLPASAVIHAVGPIWHGGDRQEAELLADAYKNSLLLASANNYRSIAFP 119
Query: 136 AISCGVSQIMTHA---IKLQTNCGFLESF 161
AIS GV A I ++T FL +
Sbjct: 120 AISTGVYGYPKEAAAEIAVRTVNAFLTRY 148
>gi|333395077|ref|ZP_08476896.1| appr-1-p processing domain-containing protein, partial
[Lactobacillus coryniformis subsp. coryniformis KCTC
3167]
Length = 165
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 76/127 (59%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++I +GDI++ VD AIV+ N LL GG AIH AAGP+L AC Q+
Sbjct: 2 IQIIQGDITQMQVD----AIVNAANTTLLGGGGVDGAIHRAAGPELLAACRQLHG----- 52
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
C GEA+IT GF+LP VIHT GP++ E +L ++Y N L++ A++ Q +AF
Sbjct: 53 -CATGEAKITAGFRLPAKFVIHTPGPIWRDGTQSEAQLLHNSYVNSLALAAAHDCQTVAF 111
Query: 135 PAISCGV 141
P+IS GV
Sbjct: 112 PSISTGV 118
>gi|330508805|ref|YP_004385233.1| appr-1-p processing enzyme family [Methanosaeta concilii GP6]
gi|328929613|gb|AEB69415.1| appr-1-p processing enzyme family [Methanosaeta concilii GP6]
Length = 171
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 66/109 (60%), Gaps = 7/109 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH+AAGP+L C QI CP GEARIT G++LP
Sbjct: 20 DAIVNAANSSLLGGGGVDGAIHKAAGPELLGECRQIGG------CPVGEARITRGYRLPA 73
Query: 93 SHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAFPAISCG 140
VIHTVGPV+ ED +L Y++C ++ + I+ IAFPAIS G
Sbjct: 74 RFVIHTVGPVWRGGSEGEDQLLARCYQSCFALAEKYEIKSIAFPAISTG 122
>gi|308270088|emb|CBX26700.1| hypothetical protein N47_A07290 [uncultured Desulfobacterium sp.]
Length = 177
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 74/128 (57%), Gaps = 14/128 (10%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++I +GDI++ VD AIV+ N LL GG AIH AGP L + C ++
Sbjct: 9 IEIKQGDITKLNVD----AIVNAANHSLLGGGGVDGAIHRGAGPKLLEECKRLG------ 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED--ILRSAYKNCLSVGKANNIQYIA 133
C GEA+IT G+ L +VIHTVGPV++ PED +L Y N L + NI+ IA
Sbjct: 59 GCDTGEAKITNGYNLLALYVIHTVGPVYS--GKPEDSILLSRCYLNSLQLASEKNIKSIA 116
Query: 134 FPAISCGV 141
FPAISCGV
Sbjct: 117 FPAISCGV 124
>gi|256841385|ref|ZP_05546892.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|423330637|ref|ZP_17308421.1| hypothetical protein HMPREF1075_00434 [Parabacteroides distasonis
CL03T12C09]
gi|256737228|gb|EEU50555.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|409232253|gb|EKN25101.1| hypothetical protein HMPREF1075_00434 [Parabacteroides distasonis
CL03T12C09]
Length = 175
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 67/111 (60%), Gaps = 9/111 (8%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAGP+L C + CP GEA+IT G++L
Sbjct: 18 DAIVNAANNSLLGGGGVDGAIHWAAGPELLDECRTLQG------CPTGEAKITKGYRLKA 71
Query: 93 SHVIHTVGPVFNF--HCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
HVIHTVGP++ H PE +L + Y+N L + K N ++ IAFP+IS GV
Sbjct: 72 RHVIHTVGPIYRNGQHGEPE-LLENCYRNSLRLAKENRLRTIAFPSISTGV 121
>gi|220915977|ref|YP_002491281.1| Appr-1-p processing protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|219953831|gb|ACL64215.1| Appr-1-p processing domain protein [Anaeromyxobacter dehalogenans
2CP-1]
Length = 177
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 74/126 (58%), Gaps = 11/126 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ + +GD++R VD AIV+ N LL GG AIH AAGP+L++AC + A
Sbjct: 10 IALVQGDLTRLQVD----AIVNAANASLLGGGGVDGAIHRAAGPELREACRALGGAHT-- 63
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAF 134
GEA+ITPGF+LP HVIH VGPV+ ED L S Y+ + + + ++ IAF
Sbjct: 64 ----GEAKITPGFRLPARHVIHAVGPVWQGGGAGEDAALASCYRASMRLAAEHGLRSIAF 119
Query: 135 PAISCG 140
PAIS G
Sbjct: 120 PAISTG 125
>gi|419954777|ref|ZP_14470912.1| appr-1-p processing domain-containing protein [Pseudomonas stutzeri
TS44]
gi|387968390|gb|EIK52680.1| appr-1-p processing domain-containing protein [Pseudomonas stutzeri
TS44]
Length = 167
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 76/128 (59%), Gaps = 11/128 (8%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+L+ +GDI+ VD A+V+ N LL GG AIH AAGP L++ C +
Sbjct: 2 TLRAWRGDITALAVD----AVVNAANSSLLGGGGVDGAIHRAAGPQLREYCSTLGG---- 53
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIA 133
C GEAR+TPGF+LP +IHTVGP++ E + L + Y+N ++ + + ++ IA
Sbjct: 54 --CAVGEARLTPGFRLPARCIIHTVGPIWQGGAQGEPEQLAACYRNSFALAEQHQLRSIA 111
Query: 134 FPAISCGV 141
FPAISCG+
Sbjct: 112 FPAISCGI 119
>gi|283784842|ref|YP_003364707.1| DNA and/or RNA unwinding protein [Citrobacter rodentium ICC168]
gi|282948296|emb|CBG87876.1| putative DNA and/or RNA unwinding protein [Citrobacter rodentium
ICC168]
Length = 187
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
+ + + GDI+ VD AIV+ N L+ GG AIH AAGP+L +AC + Q
Sbjct: 12 NSRIHVIHGDITTVAVD----AIVNAANPSLMGGGGVDGAIHRAAGPELLEACMTVRRQQ 67
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQY 131
CPPG A IT +LP VIHTVGP++ N +L AY N L++ AN Q
Sbjct: 68 G--ECPPGHAVITAAGRLPAKAVIHTVGPIWRGGEHNEAQLLHDAYLNSLNLALANGYQS 125
Query: 132 IAFPAISCGV 141
IAFPAIS GV
Sbjct: 126 IAFPAISTGV 135
>gi|108758530|ref|YP_629898.1| hypothetical protein MXAN_1646 [Myxococcus xanthus DK 1622]
gi|108462410|gb|ABF87595.1| conserved hypothetical protein [Myxococcus xanthus DK 1622]
Length = 177
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 72/126 (57%), Gaps = 11/126 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L +++GDI++ +DAIV+ N LL GG AIH AAGP L C +
Sbjct: 6 LVLTRGDITQV----QADAIVNAANSTLLGGGGVDGAIHRAAGPGLLAECRTLG------ 55
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAF 134
RCPPGEARIT G LP HVIH VGPV+ + E+ +L Y+ S+ + + + IAF
Sbjct: 56 RCPPGEARITGGHALPAKHVIHAVGPVWQGGSSGEETVLARCYRRAFSLMEQHGLGTIAF 115
Query: 135 PAISCG 140
P+IS G
Sbjct: 116 PSISTG 121
>gi|150008598|ref|YP_001303341.1| histone macro-H2A1-like protein [Parabacteroides distasonis ATCC
8503]
gi|255014396|ref|ZP_05286522.1| histone macro-H2A1-related protein [Bacteroides sp. 2_1_7]
gi|262383448|ref|ZP_06076584.1| UPF0189 protein [Bacteroides sp. 2_1_33B]
gi|301309496|ref|ZP_07215438.1| appr-1-p processing enzyme domain protein [Bacteroides sp. 20_3]
gi|410103207|ref|ZP_11298131.1| hypothetical protein HMPREF0999_01903 [Parabacteroides sp. D25]
gi|423338015|ref|ZP_17315758.1| hypothetical protein HMPREF1059_01683 [Parabacteroides distasonis
CL09T03C24]
gi|149937022|gb|ABR43719.1| histone macro-H2A1-related protein [Parabacteroides distasonis ATCC
8503]
gi|262294346|gb|EEY82278.1| UPF0189 protein [Bacteroides sp. 2_1_33B]
gi|300832585|gb|EFK63213.1| appr-1-p processing enzyme domain protein [Bacteroides sp. 20_3]
gi|409235524|gb|EKN28341.1| hypothetical protein HMPREF1059_01683 [Parabacteroides distasonis
CL09T03C24]
gi|409237665|gb|EKN30463.1| hypothetical protein HMPREF0999_01903 [Parabacteroides sp. D25]
Length = 175
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 67/111 (60%), Gaps = 9/111 (8%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAGP+L C + CP GEA+IT G++L
Sbjct: 18 DAIVNAANNSLLGGGGVDGAIHWAAGPELLDECRTLQG------CPTGEAKITKGYRLKA 71
Query: 93 SHVIHTVGPVFNF--HCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
HVIHTVGP++ H PE +L + Y+N L + K N ++ IAFP+IS GV
Sbjct: 72 RHVIHTVGPIYRNGQHGEPE-LLENCYRNSLRLAKENRLRTIAFPSISTGV 121
>gi|184156280|ref|YP_001844620.1| hypothetical protein LAF_1804 [Lactobacillus fermentum IFO 3956]
gi|260662498|ref|ZP_05863393.1| appr-1-p processing domain-containing protein [Lactobacillus
fermentum 28-3-CHN]
gi|183227624|dbj|BAG28140.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956]
gi|260553189|gb|EEX26132.1| appr-1-p processing domain-containing protein [Lactobacillus
fermentum 28-3-CHN]
Length = 169
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 75/127 (59%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++++GDI++ VD AIV+ N L GG AIH AAGP L AC +
Sbjct: 4 IEVTQGDITKLKVD----AIVNAANTTLRGGGGVDGAIHRAAGPGLDVACAKFGG----- 54
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C GEARITPGF LP + +IHT GPV+ H + +L ++Y+N L + AN + +AF
Sbjct: 55 -CATGEARITPGFNLPATFIIHTPGPVWQGGHHHEASLLANSYRNSLQLAVANGCRTVAF 113
Query: 135 PAISCGV 141
P+IS GV
Sbjct: 114 PSISTGV 120
>gi|416484672|ref|ZP_11724296.1| hypothetical protein SEEM675_21927, partial [Salmonella enterica
subsp. enterica serovar Montevideo str. OH_2009072675]
gi|322652231|gb|EFY48589.1| hypothetical protein SEEM675_21927 [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
Length = 176
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 73/123 (59%), Gaps = 7/123 (5%)
Query: 20 KGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPP 79
+GDI++ VD AIV+ N L+ GG AIH AAGP L AC I + Q C
Sbjct: 6 QGDITQLSVD----AIVNAANASLMGGGGVDGAIHRAAGPALLDACKLIRQQQGE--CQT 59
Query: 80 GEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAIS 138
G A ITP KL VIHTVGPV+ + E ++L AY+NCL + +AN+ + IAFPAIS
Sbjct: 60 GHAVITPAGKLSAKAVIHTVGPVWRGGEHQEAELLEEAYRNCLLLAEANHFRSIAFPAIS 119
Query: 139 CGV 141
GV
Sbjct: 120 TGV 122
>gi|16082127|ref|NP_394564.1| hypothetical protein Ta1105 [Thermoplasma acidophilum DSM 1728]
gi|10640418|emb|CAC12232.1| conserved hypothetical protein [Thermoplasma acidophilum]
Length = 213
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 74/126 (58%), Gaps = 5/126 (3%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L + GDI+ + ++AIV+ N L+ GG AIH AAGP+L +I +
Sbjct: 28 LAVEVGDIT----ESDAEAIVNAANSSLMGGGGVDGAIHSAAGPELNGELVKIRRERYPN 83
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
PPGEA IT G++L SH+IHTVGPV+ N E D+L +Y++CL + + I IAF
Sbjct: 84 GLPPGEAVITRGYRLKASHIIHTVGPVWMGGRNGEDDVLYRSYRSCLDLAREFGIHDIAF 143
Query: 135 PAISCG 140
PA+S G
Sbjct: 144 PALSTG 149
>gi|441496527|ref|ZP_20978758.1| Putative ADP-ribose binding module protein [Fulvivirga imtechensis
AK7]
gi|441439754|gb|ELR73059.1| Putative ADP-ribose binding module protein [Fulvivirga imtechensis
AK7]
Length = 181
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 75/129 (58%), Gaps = 11/129 (8%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
+ L++ +GDI++ VD AIV+ N LL GG AIH AAGP L++ +
Sbjct: 11 SRLEVQQGDITQLQVD----AIVNAANSSLLGGGGVDGAIHRAAGPRLKEYNRTLGG--- 63
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYI 132
C G+ARI+PGF LP HVI TVGPV+ ED +L+S YK L + N+++ I
Sbjct: 64 ---CDTGDARISPGFDLPARHVISTVGPVWKGGQQKEDELLKSCYKRSLEIAVQNHVRTI 120
Query: 133 AFPAISCGV 141
AFP IS G+
Sbjct: 121 AFPCISTGI 129
>gi|254448590|ref|ZP_05062049.1| appr-1-p processing [gamma proteobacterium HTCC5015]
gi|198261779|gb|EDY86065.1| appr-1-p processing [gamma proteobacterium HTCC5015]
Length = 166
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 77/127 (60%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++S GDI++ VD AIV+ N LL GG AIH AAGP+L C +
Sbjct: 2 IELSVGDITQMRVD----AIVNAANSSLLGGGGVDGAIHRAAGPELLNECRALKG----- 52
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C G+A++T ++LP +VIHTVGPV+ + H ++L S Y+N L + ++++ +AF
Sbjct: 53 -CATGQAKLTQAYRLPARYVIHTVGPVYRDGHAGEAELLASCYQNSLQLAADHHLKSVAF 111
Query: 135 PAISCGV 141
P+ISCGV
Sbjct: 112 PSISCGV 118
>gi|402843008|ref|ZP_10891411.1| RNase III regulator YmdB [Klebsiella sp. OBRC7]
gi|402278394|gb|EJU27458.1| RNase III regulator YmdB [Klebsiella sp. OBRC7]
Length = 184
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 81/149 (54%), Gaps = 10/149 (6%)
Query: 17 KISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVR 76
++ GDI+R VD IV+ N LL GG AIH AAGP+L AC + + Q
Sbjct: 6 EVVLGDITRLEVD----VIVNAANPSLLGGGGVDGAIHRAAGPELLAACKVVRQQQGE-- 59
Query: 77 CPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFP 135
CPPG A IT LP S VIH VGPV++ E ++L YKN L + ANN + IAFP
Sbjct: 60 CPPGHAVITAAGNLPASAVIHAVGPVWHGGDRQEAELLADVYKNSLLLASANNYRSIAFP 119
Query: 136 AISCGV---SQIMTHAIKLQTNCGFLESF 161
AIS GV + + I ++T FL +
Sbjct: 120 AISTGVYGYPKQVAAEIAVRTVTAFLTRY 148
>gi|397168100|ref|ZP_10491538.1| regulator of RNase III activity [Enterobacter radicincitans DSM
16656]
gi|396089635|gb|EJI87207.1| regulator of RNase III activity [Enterobacter radicincitans DSM
16656]
Length = 180
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 72/127 (56%), Gaps = 7/127 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ +GDI+ VD IV+ N LL GG AIH AAGP+L KAC Q+ + Q
Sbjct: 5 MQVLQGDITTLEVD----VIVNAANSSLLGGGGVDGAIHRAAGPELLKACQQVRQQQG-- 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
CPPG A IT L VIHTVGPV+ E +L AY+N L + +AN IAF
Sbjct: 59 ECPPGHAVITTAGNLRAKAVIHTVGPVWRGGGEHEAHLLEDAYRNSLLLAEANGYTTIAF 118
Query: 135 PAISCGV 141
PAIS GV
Sbjct: 119 PAISTGV 125
>gi|347753842|ref|YP_004861406.1| putative phosphatase [Candidatus Chloracidobacterium thermophilum
B]
gi|347586360|gb|AEP10890.1| putative phosphatase [Candidatus Chloracidobacterium thermophilum
B]
Length = 180
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 77/126 (61%), Gaps = 11/126 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L ++ GDI+R+ + DAIV+ N LL GG AIH AAGP+L + C +
Sbjct: 9 LIVTVGDITRF----AGDAIVNAANPSLLGGGGVDGAIHRAAGPELLEECRTLGG----- 59
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAF 134
CPPG+A++T G+ LP VIHTVGPV+ + ED IL ++N L++ A+ +Q +AF
Sbjct: 60 -CPPGQAKLTRGYCLPARWVIHTVGPVWRGGTHGEDEILAECHRNSLALAAAHGLQTLAF 118
Query: 135 PAISCG 140
PAIS G
Sbjct: 119 PAISTG 124
>gi|417838295|ref|ZP_12484533.1| Macro domain, possibly ADP-ribose binding module [Lactobacillus
johnsonii pf01]
gi|338761838|gb|EGP13107.1| Macro domain, possibly ADP-ribose binding module [Lactobacillus
johnsonii pf01]
Length = 168
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 73/130 (56%), Gaps = 12/130 (9%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T+L + + DI++ VD AIV+ N LL GG AIH AAGP+L C +
Sbjct: 2 TNLYVIQADITKLKVD----AIVNAANRTLLGGGGVDGAIHRAAGPELLAECRTLKG--- 54
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVF--NFHCNPEDILRSAYKNCLSVGKANNIQY 131
C GEA+IT G+ LP +VIHTVGPV+ NF ++L + Y+N L + K N+
Sbjct: 55 ---CDTGEAKITKGYNLPAKYVIHTVGPVYNPNFAQKDAELLSNCYRNSLDLAKKYNLHS 111
Query: 132 IAFPAISCGV 141
IAF IS GV
Sbjct: 112 IAFSCISTGV 121
>gi|153812540|ref|ZP_01965208.1| hypothetical protein RUMOBE_02939 [Ruminococcus obeum ATCC 29174]
gi|149831465|gb|EDM86553.1| macro domain protein [Ruminococcus obeum ATCC 29174]
Length = 171
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 80/150 (53%), Gaps = 13/150 (8%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
++K KGDI++ AIV+ N LL GG AIH AAGP+L C +
Sbjct: 3 TIKTVKGDITKIT---DVQAIVNAANNSLLGGGGVDGAIHHAAGPELLAECRTLH----- 54
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIA 133
C GEA+IT + LP +VIHTVGP++N N ED +L Y N L + N+I+ IA
Sbjct: 55 -GCETGEAKITRAYNLPCDYVIHTVGPIWNGGKNNEDKLLTDCYYNSLKLAMENDIRTIA 113
Query: 134 FPAISCGVSQI---MTHAIKLQTNCGFLES 160
FP+IS GV I ++T C FL+
Sbjct: 114 FPSISTGVYHFPVERAAKIAVKTVCRFLQE 143
>gi|383315506|ref|YP_005376348.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Frateuria aurantia DSM 6220]
gi|379042610|gb|AFC84666.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Frateuria aurantia DSM 6220]
Length = 170
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 68/110 (61%), Gaps = 7/110 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
A+V+ N LL GG AIH AAGP+L +AC + CP GEAR+TPGF LP
Sbjct: 19 GAVVNAANSALLGGGGVDGAIHRAAGPELLEACRALRG------CPVGEARLTPGFALPA 72
Query: 93 SHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
+ +IHTVGPV+ H + ++L + Y++CL + + I +AFPAIS GV
Sbjct: 73 AWIIHTVGPVWQGGHRDEAELLAACYRHCLQLAGRHGIHSLAFPAISTGV 122
>gi|385826617|ref|YP_005862959.1| hypothetical protein [Lactobacillus johnsonii DPC 6026]
gi|329668061|gb|AEB94009.1| hypothetical protein LJP_1693c [Lactobacillus johnsonii DPC 6026]
Length = 164
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 73/130 (56%), Gaps = 12/130 (9%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T+L + + DI++ VD AIV+ N LL GG AIH AAGP+L C +
Sbjct: 2 TNLYVIQADITKLKVD----AIVNAANRTLLGGGGVDGAIHRAAGPELLAECRTLKG--- 54
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVF--NFHCNPEDILRSAYKNCLSVGKANNIQY 131
C GEA+IT G+ LP +VIHTVGPV+ NF ++L + Y+N L + K N+
Sbjct: 55 ---CDTGEAKITKGYNLPAKYVIHTVGPVYNPNFAQKDAELLSNCYRNSLDLAKKYNLHS 111
Query: 132 IAFPAISCGV 141
IAF IS GV
Sbjct: 112 IAFSCISTGV 121
>gi|83311184|ref|YP_421448.1| phosphatase [Magnetospirillum magneticum AMB-1]
gi|82946025|dbj|BAE50889.1| Predicted phosphatase homologous to the C-terminal domain of
histone macroH2A1 [Magnetospirillum magneticum AMB-1]
Length = 172
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 73/130 (56%), Gaps = 11/130 (8%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
++ ++ + DI+R VD AIV+ N LL GG AIH AAGP L +AC +
Sbjct: 3 QSRTRVVEADITRLAVD----AIVNAANSSLLGGGGVDGAIHRAAGPQLLEACRAL---- 54
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
C G+ARITPGF+LP VIH VGPV+ E D+LRS Y+ L + +
Sbjct: 55 --CGCATGDARITPGFRLPARWVIHAVGPVWKGGEQGEADLLRSCYRRSLELAVEAGART 112
Query: 132 IAFPAISCGV 141
IAFPAIS G+
Sbjct: 113 IAFPAISTGI 122
>gi|184200445|ref|YP_001854652.1| hypothetical protein KRH_07990 [Kocuria rhizophila DC2201]
gi|183580675|dbj|BAG29146.1| hypothetical protein [Kocuria rhizophila DC2201]
Length = 172
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 71/127 (55%), Gaps = 4/127 (3%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+++I KGDI+R +DA+V+ N LL GG AIH AAG L C ++ E +
Sbjct: 2 NIEIRKGDITRV----ETDAVVNAANSTLLGGGGVDGAIHRAAGKQLLAECRKLRETTLQ 57
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
P G+A T G++LP VIHTVGPV+ + DIL S Y+ L V + +AF
Sbjct: 58 DGLPAGQAVATGGYELPARWVIHTVGPVYAKTKDKSDILASCYRESLRVADEIGARSVAF 117
Query: 135 PAISCGV 141
PAIS G+
Sbjct: 118 PAISAGI 124
>gi|357635096|ref|ZP_09132974.1| Appr-1-p processing domain protein [Desulfovibrio sp. FW1012B]
gi|357583650|gb|EHJ48983.1| Appr-1-p processing domain protein [Desulfovibrio sp. FW1012B]
Length = 184
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 77/138 (55%), Gaps = 10/138 (7%)
Query: 6 QTLSFSTKTS-LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKA 64
+T+S++ + L++ GDI+ DAIV+ N L GG AIH AAGP L A
Sbjct: 3 ETVSYAIGSGVLRLIAGDIT----TDDGDAIVNAANSALAGGGGVDGAIHRAAGPKLLAA 58
Query: 65 CYQIPEAQPRV-RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLS 122
C I R+ R P G A ITPGF LP HVIHTVGP++ + E + LRSAY L+
Sbjct: 59 CRDI---IARIGRLPAGGAVITPGFDLPARHVIHTVGPIWRGGNDGEAEALRSAYAQSLA 115
Query: 123 VGKANNIQYIAFPAISCG 140
N+ ++FPAIS G
Sbjct: 116 RAAEANLTTVSFPAISTG 133
>gi|427720334|ref|YP_007068328.1| Appr-1-p processing protein [Calothrix sp. PCC 7507]
gi|427352770|gb|AFY35494.1| Appr-1-p processing domain protein [Calothrix sp. PCC 7507]
Length = 310
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 74/125 (59%), Gaps = 11/125 (8%)
Query: 18 ISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRC 77
+ +GDI++ +D AIV+ NE L+ GG AIH AAGP L + C Q+ C
Sbjct: 144 VIQGDITQLQID----AIVNAANEELMPGGGVCGAIHRAAGPSLWEECRQLK------GC 193
Query: 78 PPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAFPA 136
GEA+IT G+ LP VIHTVGPV+ ED +L S Y+ L++ + + I+ IAFPA
Sbjct: 194 KTGEAKITKGYNLPAQWVIHTVGPVWEGGSYGEDELLASCYRRSLALAEKHQIKAIAFPA 253
Query: 137 ISCGV 141
IS GV
Sbjct: 254 ISTGV 258
>gi|374385375|ref|ZP_09642882.1| hypothetical protein HMPREF9449_01268 [Odoribacter laneus YIT
12061]
gi|373225866|gb|EHP48194.1| hypothetical protein HMPREF9449_01268 [Odoribacter laneus YIT
12061]
Length = 174
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 76/127 (59%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L+I +GDI+ VD AIV+ N+ LL GG AIH AAGP+L + C ++
Sbjct: 4 LEIIQGDITTLKVD----AIVNAANKTLLGGGGVDGAIHRAAGPELLEECRKLHG----- 54
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
C GEA+IT G++LP S+VIHTVGPV+ E ++L + Y+N L + ++ IAF
Sbjct: 55 -CETGEAKITKGYRLPASYVIHTVGPVYRSGRRGEPELLAACYRNSLHLAVERGLKTIAF 113
Query: 135 PAISCGV 141
P IS GV
Sbjct: 114 PCISTGV 120
>gi|34541402|ref|NP_905881.1| hypothetical protein PG1779 [Porphyromonas gingivalis W83]
gi|188995583|ref|YP_001929835.1| hypothetical protein PGN_1719 [Porphyromonas gingivalis ATCC 33277]
gi|334147144|ref|YP_004510073.1| hypothetical protein PGTDC60_1357 [Porphyromonas gingivalis TDC60]
gi|419970018|ref|ZP_14485533.1| macro domain protein [Porphyromonas gingivalis W50]
gi|34397719|gb|AAQ66780.1| conserved hypothetical protein [Porphyromonas gingivalis W83]
gi|188595263|dbj|BAG34238.1| conserved hypothetical protein with appr-1-p processing enzyme
domain [Porphyromonas gingivalis ATCC 33277]
gi|333804300|dbj|BAK25507.1| hypothetical protein PGTDC60_1357 [Porphyromonas gingivalis TDC60]
gi|392611788|gb|EIW94515.1| macro domain protein [Porphyromonas gingivalis W50]
Length = 164
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 75/128 (58%), Gaps = 13/128 (10%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ I+ GDI+R+ DAIV+ N LL GG AIH AAGP+L + C +
Sbjct: 4 ITITVGDITRF----EGDAIVNAANHTLLGGGGVDGAIHRAAGPELLEECRTLN------ 53
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNF--HCNPEDILRSAYKNCLSVGKANNIQYIA 133
CP GE++IT G+ LP +VIHTVGPV++ H PE +L S Y+ LS+ ++ IA
Sbjct: 54 GCPTGESKITGGYNLPAQYVIHTVGPVWHGGQHGEPE-LLASCYRTSLSIALDKGLKSIA 112
Query: 134 FPAISCGV 141
FP IS GV
Sbjct: 113 FPCISTGV 120
>gi|262043246|ref|ZP_06016380.1| RNase III regulator YmdB [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259039428|gb|EEW40565.1| RNase III regulator YmdB [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 175
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 78/145 (53%), Gaps = 10/145 (6%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPG 80
GDI+ VD IV+ N LL GG AIH AAGP L AC Q+ + Q CPPG
Sbjct: 10 GDITTLDVD----VIVNAANPSLLGGGGVDGAIHRAAGPALLAACKQVLQQQGE--CPPG 63
Query: 81 EARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISC 139
A IT LP S VIHTVGPV++ E L AYKN L + ANN + IAFPAIS
Sbjct: 64 YAVITIAGNLPASAVIHTVGPVWHGGDRMEAQTLADAYKNSLQLASANNYRSIAFPAIST 123
Query: 140 GV---SQIMTHAIKLQTNCGFLESF 161
GV + AI ++T FL +
Sbjct: 124 GVYGYPKEEAAAIAVRTVTAFLTRY 148
>gi|388582535|gb|EIM22839.1| A1pp-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 171
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 66/109 (60%), Gaps = 7/109 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
+AIV+ NE LL GG IH+ AGP L + C + C G+A++T G+ LP
Sbjct: 21 EAIVNAANESLLGGGGVDGQIHKIAGPQLLEECRTLSG------CKTGDAKLTKGYNLPA 74
Query: 93 SHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
+VIHTVGP F + N E++LRSAY+ L V N I+ +AFP+IS GV
Sbjct: 75 KYVIHTVGPRFT-NSNREELLRSAYRRSLEVAHQNGIKSLAFPSISTGV 122
>gi|334126769|ref|ZP_08500715.1| RNase III regulator YmdB [Centipeda periodontii DSM 2778]
gi|333390929|gb|EGK62053.1| RNase III regulator YmdB [Centipeda periodontii DSM 2778]
Length = 179
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 69/121 (57%), Gaps = 10/121 (8%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPG 80
GDI+ VD IV+ N LL GG AIH AAG +L C + C G
Sbjct: 18 GDITTLAVD----VIVNAANRSLLGGGGVDGAIHRAAGRELLAECRTLGG------CATG 67
Query: 81 EARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCG 140
A+IT G++LP +VIHTVGPV++ + ++LRS Y++ L + +A + IAFPAIS G
Sbjct: 68 AAKITKGYRLPARYVIHTVGPVYSGSASDAELLRSCYRSSLELARARGLHTIAFPAISTG 127
Query: 141 V 141
V
Sbjct: 128 V 128
>gi|268320169|ref|YP_003293825.1| hypothetical protein FI9785_1706 [Lactobacillus johnsonii FI9785]
gi|262398544|emb|CAX67558.1| hypothetical protein predicted by Glimmer/Critica [Lactobacillus
johnsonii FI9785]
Length = 168
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 73/130 (56%), Gaps = 12/130 (9%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T+L + + DI++ VD AIV+ N LL GG AIH AAGP+L C +
Sbjct: 2 TNLHVIQADITKLKVD----AIVNAANRTLLGGGGVDGAIHRAAGPELLAECRTLKG--- 54
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVF--NFHCNPEDILRSAYKNCLSVGKANNIQY 131
C GEA+IT G+ LP HVIHTVGPV+ NF +L + Y++ L++ K N+
Sbjct: 55 ---CDTGEAKITKGYNLPAKHVIHTVGPVYNPNFAQKDAKLLANCYRHSLNLAKKYNLHS 111
Query: 132 IAFPAISCGV 141
IAF IS GV
Sbjct: 112 IAFSCISTGV 121
>gi|256828369|ref|YP_003157097.1| Appr-1-p processing protein [Desulfomicrobium baculatum DSM 4028]
gi|256577545|gb|ACU88681.1| Appr-1-p processing domain protein [Desulfomicrobium baculatum DSM
4028]
Length = 169
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 66/109 (60%), Gaps = 7/109 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAGP L C + CP G+ARIT G+ LP
Sbjct: 15 DAIVNAANSSLLGGGGVDGAIHRAAGPGLLAECRTLGG------CPVGQARITGGYMLPA 68
Query: 93 SHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCG 140
HVIHTVGPV+ + E ++L + Y CLS+ + +++ +AFPAISCG
Sbjct: 69 RHVIHTVGPVWKGGGHGERELLAACYSACLSLAREHHLDSVAFPAISCG 117
>gi|375262386|ref|YP_005024616.1| hypothetical protein VEJY3_16106 [Vibrio sp. EJY3]
gi|369842814|gb|AEX23642.1| hypothetical protein VEJY3_16106 [Vibrio sp. EJY3]
Length = 171
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 73/128 (57%), Gaps = 5/128 (3%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
++ + KGDI+ VD AIV+ N +L GG AIH AG +L AC + E
Sbjct: 2 NAISLIKGDITTAKVD----AIVNAANPSMLGGGGVDGAIHHVAGRELYVACLAVKEIDG 57
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
+RCP G ARIT KL +VIH VGP+++ +P +L SAYKN L + + + +A
Sbjct: 58 -IRCPFGYARITSAGKLDARYVIHAVGPIYDKFHDPRAVLESAYKNALDLALESGCKTVA 116
Query: 134 FPAISCGV 141
PAISCGV
Sbjct: 117 LPAISCGV 124
>gi|425778051|gb|EKV16197.1| LRP16 family protein [Penicillium digitatum PHI26]
Length = 219
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 72/132 (54%), Gaps = 10/132 (7%)
Query: 9 SFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQI 68
S S ++ + DI++ VD IV+ NE LL GG AIH AAGP L + CY +
Sbjct: 32 SQSLNNTIATIRNDITKLQVD----CIVNAANESLLGGGGVDGAIHRAAGPKLVEECYHL 87
Query: 69 PEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANN 128
C G+A+IT + LP VIHTVGP++ +P +LRS Y+ L V N+
Sbjct: 88 DG------CETGDAKITSAYDLPCKRVIHTVGPIYRREADPVALLRSCYRRSLEVAVEND 141
Query: 129 IQYIAFPAISCG 140
++ IAF AIS G
Sbjct: 142 MKSIAFAAISTG 153
>gi|193213713|ref|YP_001999666.1| hypothetical protein Cpar_2080 [Chlorobaculum parvum NCIB 8327]
gi|193087190|gb|ACF12466.1| Appr-1-p processing domain protein [Chlorobaculum parvum NCIB 8327]
Length = 172
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 73/122 (59%), Gaps = 11/122 (9%)
Query: 20 KGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPP 79
K DI+ VD AIV+ N LL GG AIH AAGP+L +AC + CP
Sbjct: 11 KADITTLKVD----AIVNAANSSLLGGGGVDGAIHRAAGPELLEACRALG------GCPT 60
Query: 80 GEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAIS 138
GEARIT G++LP S+VIHTVGPV++ + E ++L S Y+N L + + IAFP+IS
Sbjct: 61 GEARITKGYRLPASYVIHTVGPVWHGDSHNEAELLTSCYRNALKLAIEHQCHTIAFPSIS 120
Query: 139 CG 140
G
Sbjct: 121 TG 122
>gi|383790152|ref|YP_005474726.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Spirochaeta africana DSM 8902]
gi|383106686|gb|AFG37019.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Spirochaeta africana DSM 8902]
Length = 183
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 73/127 (57%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L++ + DI+ VD AIV+ NE LL GG AIH AAGP L C +I
Sbjct: 2 LRVLQADITTLKVD----AIVNAANESLLGGGGVDGAIHRAAGPGLLAECRKIGG----- 52
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
CP GEARIT G+ LP VIHTVGPV++ E ++L + Y+N L + + + IAF
Sbjct: 53 -CPTGEARITQGYNLPARRVIHTVGPVWHGGTRGEAELLAACYRNSLELALHHGLHRIAF 111
Query: 135 PAISCGV 141
P+IS GV
Sbjct: 112 PSISTGV 118
>gi|197121273|ref|YP_002133224.1| Appr-1-p processing protein [Anaeromyxobacter sp. K]
gi|196171122|gb|ACG72095.1| Appr-1-p processing domain protein [Anaeromyxobacter sp. K]
Length = 177
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 73/126 (57%), Gaps = 11/126 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ + +GD++R VD AIV+ N LL GG AIH AAGP+L +AC + A
Sbjct: 10 IALVQGDLTRLQVD----AIVNAANASLLGGGGVDGAIHRAAGPELLEACRALGGAHT-- 63
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAF 134
GEA+ITPGF+LP HVIH VGPV+ ED L S Y+ + + + ++ IAF
Sbjct: 64 ----GEAKITPGFRLPARHVIHAVGPVWQGGGAGEDAALASCYRASMRLAAEHGLRSIAF 119
Query: 135 PAISCG 140
PAIS G
Sbjct: 120 PAISTG 125
>gi|384217715|ref|YP_005608881.1| hypothetical protein BJ6T_40190 [Bradyrhizobium japonicum USDA 6]
gi|354956614|dbj|BAL09293.1| hypothetical protein BJ6T_40190 [Bradyrhizobium japonicum USDA 6]
Length = 183
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 66/110 (60%), Gaps = 7/110 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH+AAGP+L C + CP G+A+IT G++LP
Sbjct: 26 DAIVNAANSSLLGGGGVDGAIHDAAGPELLAECRTLGG------CPTGDAKITKGYRLPA 79
Query: 93 SHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
HVIH VGPV++ E D LRS Y+ L + +AN + +AF AIS GV
Sbjct: 80 RHVIHAVGPVWHGGSRGEADSLRSCYRRALELSQANRLNSLAFSAISTGV 129
>gi|358637210|dbj|BAL24507.1| hypothetical protein AZKH_2196 [Azoarcus sp. KH32C]
Length = 171
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 72/127 (56%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ I GDI+ VD AIV+ NE LL GG AIH AAGP+L C +
Sbjct: 1 MDIIVGDITTLKVD----AIVNAANESLLGGGGVDGAIHRAAGPELLAECRTLDG----- 51
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAF 134
C G+A+IT G++LP HVIHTVGPV++ E+ +L Y CL + A+ + IAF
Sbjct: 52 -CATGDAKITKGYRLPARHVIHTVGPVWHGGSRGEEALLARCYMRCLELADAHALHSIAF 110
Query: 135 PAISCGV 141
PAIS GV
Sbjct: 111 PAISTGV 117
>gi|227889258|ref|ZP_04007063.1| Appr-1-p processing domain protein [Lactobacillus johnsonii ATCC
33200]
gi|227850060|gb|EEJ60146.1| Appr-1-p processing domain protein [Lactobacillus johnsonii ATCC
33200]
Length = 168
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 74/130 (56%), Gaps = 12/130 (9%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T+L + + DI++ VD AIV+ N LL GG AIH AAGP+L C +
Sbjct: 2 TNLHVIQADITKLKVD----AIVNAANRTLLGGGGVDGAIHRAAGPELLAECRTLKG--- 54
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVF--NFHCNPEDILRSAYKNCLSVGKANNIQY 131
C GEA+IT G+ +P +VIHTVGPV+ NF ++L + Y+N L++ K N+
Sbjct: 55 ---CDTGEAKITKGYNVPAKYVIHTVGPVYNPNFAQKDAELLANCYRNSLNLAKKYNLHS 111
Query: 132 IAFPAISCGV 141
IAF IS GV
Sbjct: 112 IAFSCISTGV 121
>gi|365848966|ref|ZP_09389437.1| macro domain protein [Yokenella regensburgei ATCC 43003]
gi|364569610|gb|EHM47232.1| macro domain protein [Yokenella regensburgei ATCC 43003]
Length = 180
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 74/129 (57%), Gaps = 7/129 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
++ +++ KGDI+ VD IV+ N LL GG AIH AAGP L +AC + + Q
Sbjct: 2 RSRIEVIKGDITTLAVD----VIVNAANPSLLGGGGVDGAIHHAAGPALLEACKVVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
CPPG A IT LP VIHTVGPV++ + E +L AY+N L + AN Q
Sbjct: 58 GE--CPPGHAVITVAGNLPAKAVIHTVGPVWHGGQHHEARLLEDAYRNSLMLALANGYQS 115
Query: 132 IAFPAISCG 140
IAFPAIS G
Sbjct: 116 IAFPAISTG 124
>gi|295103518|emb|CBL01062.1| Predicted phosphatase homologous to the C-terminal domain of
histone macroH2A1 [Faecalibacterium prausnitzii SL3/3]
Length = 173
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 74/134 (55%), Gaps = 10/134 (7%)
Query: 8 LSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQ 67
+S K +++ +GDI++ D IV+ N LL GG AIH AAGP+L C
Sbjct: 2 ISEKVKNQIQVVQGDITKL----DCDGIVNAANRSLLGGGGVDGAIHRAAGPELLAECRT 57
Query: 68 IPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKAN 127
+ C GEA+IT G++L ++IHTVGP+++ L Y+N L++ K +
Sbjct: 58 LHG------CRTGEAKITKGYRLKAKYIIHTVGPIYSGTAEDAAQLADCYRNSLNLAKEH 111
Query: 128 NIQYIAFPAISCGV 141
++ IAFPAIS GV
Sbjct: 112 DVHSIAFPAISTGV 125
>gi|307169853|gb|EFN62362.1| MACRO domain-containing protein 2 [Camponotus floridanus]
Length = 228
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/139 (44%), Positives = 79/139 (56%), Gaps = 14/139 (10%)
Query: 6 QTLSFSTKTSLKISKGDISRWCVDRSS---DAIVSPTNEILLLGGFTAAAIHEAAGPDLQ 62
+TL + K I+K IS W D +S DAIV+ N LL GG AIH AAGP+L+
Sbjct: 48 KTLENTEKVDKVIAK-KISIWQGDITSLEIDAIVNAANSSLLGGGGVDGAIHRAAGPNLK 106
Query: 63 KACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLS 122
K C + C GEA+IT G+ LP +VIHTVGP PE LR Y+N L+
Sbjct: 107 KECATLG------GCRVGEAKITGGYMLPAKYVIHTVGPQGE---KPEK-LRECYENSLT 156
Query: 123 VGKANNIQYIAFPAISCGV 141
V K N+++ IAFP IS G+
Sbjct: 157 VAKENHLRTIAFPCISTGI 175
>gi|172038820|ref|YP_001805321.1| hypothetical protein cce_3907 [Cyanothece sp. ATCC 51142]
gi|354556195|ref|ZP_08975492.1| Appr-1-p processing domain protein [Cyanothece sp. ATCC 51472]
gi|171700274|gb|ACB53255.1| unknown [Cyanothece sp. ATCC 51142]
gi|353551899|gb|EHC21298.1| Appr-1-p processing domain protein [Cyanothece sp. ATCC 51472]
Length = 179
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 85/156 (54%), Gaps = 16/156 (10%)
Query: 11 STKTSLKIS--KGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQI 68
S TS KI +GDI++ VD AIV+ NE LL GG AIH+AAGP L + C +
Sbjct: 3 SNGTSKKIIAIQGDITQQGVD----AIVNAANESLLGGGGVDGAIHKAAGPALLEECRTL 58
Query: 69 PEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKAN 127
C G+A+IT G++LP VIHTVGPV+ + ED +L S Y CL +
Sbjct: 59 G------GCNVGDAKITKGYQLPAQWVIHTVGPVWRGGNDQEDQLLASCYNRCLEIATEK 112
Query: 128 NIQYIAFPAISCGVSQI---MTHAIKLQTNCGFLES 160
++ IAFPAIS GV + I +QT FL+
Sbjct: 113 RLKTIAFPAISTGVYGYPLELATPIAIQTVKDFLQG 148
>gi|423119703|ref|ZP_17107387.1| UPF0189 protein ymdB [Klebsiella oxytoca 10-5246]
gi|376397542|gb|EHT10173.1| UPF0189 protein ymdB [Klebsiella oxytoca 10-5246]
Length = 177
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 80/145 (55%), Gaps = 10/145 (6%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPG 80
GDI+ VD IV+ N LL GG AIH AAGP+L AC + + Q CPPG
Sbjct: 10 GDITTLDVD----VIVNAANPSLLGGGGVDGAIHRAAGPELLAACQVVRQQQGE--CPPG 63
Query: 81 EARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISC 139
A IT +LP S VIH VGPV++ + E ++L AY+N L + AN+ + IAFPAIS
Sbjct: 64 HAVITTAGQLPASAVIHAVGPVWHGGGHQEAELLADAYRNSLQLASANSYRSIAFPAIST 123
Query: 140 GVSQIMTHA---IKLQTNCGFLESF 161
GV A I +QT FL +
Sbjct: 124 GVYGYPKQAAAEIAVQTVSTFLTRY 148
>gi|434388695|ref|YP_007099306.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Chamaesiphon minutus PCC 6605]
gi|428019685|gb|AFY95779.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Chamaesiphon minutus PCC 6605]
Length = 178
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 84/149 (56%), Gaps = 14/149 (9%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ I +GDI++ VD AIV+ N LL GG AIH AAG +L AC Q+
Sbjct: 13 MGIIQGDITKLTVD----AIVNAANSSLLGGGGVDGAIHRAAGGELLAACRQLNG----- 63
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
C G+A+ITP ++L +VIHTVGPV+ + E ++L S Y+ L++ + IQ IAF
Sbjct: 64 -CKTGKAKITPAYRLTAKYVIHTVGPVWRGGNSGEPELLASCYRESLALATLHQIQTIAF 122
Query: 135 PAISCGVSQI---MTHAIKLQTNCGFLES 160
PAISCG + + L+T +LE+
Sbjct: 123 PAISCGAYGYPIDLAARVALETVQTYLET 151
>gi|417761667|ref|ZP_12409672.1| RNase III regulator YmdB [Leptospira interrogans str. 2002000624]
gi|417773047|ref|ZP_12420933.1| RNase III regulator YmdB [Leptospira interrogans str. 2002000621]
gi|418674332|ref|ZP_13235639.1| RNase III regulator YmdB [Leptospira interrogans str. 2002000623]
gi|409942400|gb|EKN88012.1| RNase III regulator YmdB [Leptospira interrogans str. 2002000624]
gi|410577382|gb|EKQ40378.1| RNase III regulator YmdB [Leptospira interrogans str. 2002000621]
gi|410578752|gb|EKQ46606.1| RNase III regulator YmdB [Leptospira interrogans str. 2002000623]
Length = 175
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 78/129 (60%), Gaps = 7/129 (5%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
+K+ K DI++ VD AIV+ N LL GG AIH A GP++ + CY+I E Q
Sbjct: 3 NKIKLIKEDITKLEVD----AIVNAANSSLLGGGGVDGAIHRAGGPEILEECYKIREKQG 58
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFN-FHCNPEDILRSAYKNCLSVGKANNIQYI 132
C GEA IT +L +IHTVGP+++ + N +++L +AYKN L + K ++++ I
Sbjct: 59 --ECKVGEAVITTAGRLNAKFIIHTVGPIWSGGNKNEDELLSNAYKNSLLLAKNHSLKTI 116
Query: 133 AFPAISCGV 141
AFP IS G+
Sbjct: 117 AFPNISTGI 125
>gi|323140531|ref|ZP_08075458.1| macro domain protein [Phascolarctobacterium succinatutens YIT
12067]
gi|322414983|gb|EFY05775.1| macro domain protein [Phascolarctobacterium succinatutens YIT
12067]
Length = 323
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 71/128 (55%), Gaps = 10/128 (7%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
+ ++ + +GDI+ DAIV+ N LL GG AIH AAGP L + C +
Sbjct: 149 QNAISVWRGDITTL----DCDAIVNAANSTLLGGGGVDGAIHRAAGPQLLEECKTLG--- 201
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYI 132
CP G A+IT G+ LP S++IHTVGP++N L YKN L + + +++ I
Sbjct: 202 ---GCPTGAAKITYGYNLPASYIIHTVGPIYNGKVEQRLELADCYKNSLELARKHHLHSI 258
Query: 133 AFPAISCG 140
AFPAIS G
Sbjct: 259 AFPAISTG 266
>gi|256848434|ref|ZP_05553876.1| appr-1-p processing domain-containing protein [Lactobacillus
coleohominis 101-4-CHN]
gi|256714701|gb|EEU29680.1| appr-1-p processing domain-containing protein [Lactobacillus
coleohominis 101-4-CHN]
Length = 171
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 81/154 (52%), Gaps = 18/154 (11%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
LK+ +GDI+++ DAIV+ N L+ GG AIH AAGP L AC +
Sbjct: 3 QLKVIQGDITKF----QCDAIVNAANTTLMGGGGVDGAIHRAAGPALYTACEKFHG---- 54
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
CP GEARIT GF LP ++IHT GP++ H +L ++Y N L + Q +A
Sbjct: 55 --CPTGEARITRGFNLPARYIIHTPGPIWRGGHSGEPQLLANSYHNSLQLADRYGCQTVA 112
Query: 134 FPAISCGVSQI---MTHAIKLQTNCGFLESFWVE 164
FP+IS GV AI +QT +E F +E
Sbjct: 113 FPSISTGVYAYPLEQAAAIAVQT----IEKFMLE 142
>gi|206577665|ref|YP_002239320.1| hypothetical protein KPK_3497 [Klebsiella pneumoniae 342]
gi|288936174|ref|YP_003440233.1| Appr-1-p processing domain-containing protein [Klebsiella variicola
At-22]
gi|290510772|ref|ZP_06550142.1| hypothetical protein HMPREF0485_02543 [Klebsiella sp. 1_1_55]
gi|334351228|sp|B5XXK9.1|YMDB_KLEP3 RecName: Full=O-acetyl-ADP-ribose deacetylase; AltName:
Full=Regulator of RNase III activity
gi|334351229|sp|D3RKJ0.1|YMDB_KLEVT RecName: Full=O-acetyl-ADP-ribose deacetylase; AltName:
Full=Regulator of RNase III activity
gi|206566723|gb|ACI08499.1| Appr-1-p processing enzyme domain protein [Klebsiella pneumoniae
342]
gi|288890883|gb|ADC59201.1| Appr-1-p processing domain protein [Klebsiella variicola At-22]
gi|289777488|gb|EFD85486.1| hypothetical protein HMPREF0485_02543 [Klebsiella sp. 1_1_55]
Length = 175
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 69/122 (56%), Gaps = 7/122 (5%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPG 80
GDI+ VD IV+ N LL GG AIH AAGP L AC Q+ + Q CPPG
Sbjct: 10 GDITTLEVD----VIVNAANPSLLGGGGVDGAIHRAAGPALLAACKQVLQQQGE--CPPG 63
Query: 81 EARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISC 139
A IT LP S VIHTVGPV++ E L AYKN L + ANN + IAFPAIS
Sbjct: 64 HAVITIAGDLPASAVIHTVGPVWHGGDRMEAQTLADAYKNSLQLAAANNYRSIAFPAIST 123
Query: 140 GV 141
GV
Sbjct: 124 GV 125
>gi|160942618|ref|ZP_02089863.1| hypothetical protein FAEPRAM212_00092 [Faecalibacterium prausnitzii
M21/2]
gi|158446097|gb|EDP23100.1| macro domain protein [Faecalibacterium prausnitzii M21/2]
Length = 175
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 74/134 (55%), Gaps = 10/134 (7%)
Query: 8 LSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQ 67
+S K +++ +GDI++ D IV+ N LL GG AIH AAGP+L C
Sbjct: 2 ISEKVKNQIQVVQGDITKL----DCDCIVNAANRSLLGGGGVDGAIHRAAGPELLAECRT 57
Query: 68 IPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKAN 127
+ C GEA+IT G++L ++IHTVGP+++ L Y+N L++ K +
Sbjct: 58 LHG------CRTGEAKITKGYRLKAKYIIHTVGPIYSGTAEEAAQLADCYRNSLALAKEH 111
Query: 128 NIQYIAFPAISCGV 141
++ IAFPAIS GV
Sbjct: 112 DVHSIAFPAISTGV 125
>gi|303248940|ref|ZP_07335187.1| Appr-1-p processing domain protein [Desulfovibrio fructosovorans
JJ]
gi|302489663|gb|EFL49599.1| Appr-1-p processing domain protein [Desulfovibrio fructosovorans
JJ]
Length = 184
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 73/127 (57%), Gaps = 7/127 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L++ +GDI++ +DAIV+ N L GG AIH AAGP L +AC I R+
Sbjct: 14 LRLIEGDITK----DDADAIVNAANSALAGGGGVDGAIHRAAGPGLPEACRAIIAEIGRL 69
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
P G A ITPGF LP H+IHTVGP++ E + LRSAY L+ N + I+F
Sbjct: 70 --PAGGAVITPGFDLPARHIIHTVGPIWRGGNEGEPERLRSAYVESLARAIENGLSSISF 127
Query: 135 PAISCGV 141
PA+S GV
Sbjct: 128 PAVSTGV 134
>gi|300362865|ref|ZP_07059035.1| RNase III regulator YmdB [Lactobacillus gasseri JV-V03]
gi|300352915|gb|EFJ68793.1| RNase III regulator YmdB [Lactobacillus gasseri JV-V03]
Length = 168
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 73/130 (56%), Gaps = 12/130 (9%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
L++ + DI++ VD AIV+ N LL GG AIH AAGP+L C +
Sbjct: 2 NDLQVIQADITKLKVD----AIVNAANRTLLGGGGVDGAIHRAAGPELLAECRTLH---- 53
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVF--NFHCNPEDILRSAYKNCLSVGKANNIQY 131
C GEA+IT G+ LP +VIHTVGPV+ NF ++L + Y+N L++ K N+
Sbjct: 54 --GCETGEAKITKGYNLPAKYVIHTVGPVYNPNFAQKDAELLAACYRNSLNLAKQYNLHS 111
Query: 132 IAFPAISCGV 141
IAF IS GV
Sbjct: 112 IAFSCISTGV 121
>gi|238854091|ref|ZP_04644439.1| appr-1-p processing enzyme domain protein [Lactobacillus gasseri
202-4]
gi|238833285|gb|EEQ25574.1| appr-1-p processing enzyme domain protein [Lactobacillus gasseri
202-4]
Length = 169
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 72/130 (55%), Gaps = 12/130 (9%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
L++ + DI++ VD AIV+ N LL GG AIH AGP+L C +
Sbjct: 2 NDLQVIQADITKLKVD----AIVNAANRTLLGGGGVDGAIHRVAGPELLAECRTLH---- 53
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVF--NFHCNPEDILRSAYKNCLSVGKANNIQY 131
C GEA+IT G+KLP +VIHTVGPV+ NF ++L S YKN L + K ++
Sbjct: 54 --GCDTGEAKITKGYKLPAKYVIHTVGPVYNPNFAQQNAELLASCYKNSLDLAKEYDLHS 111
Query: 132 IAFPAISCGV 141
IAF IS GV
Sbjct: 112 IAFSCISTGV 121
>gi|442803948|ref|YP_007372097.1| macro domain-containing protein [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442739798|gb|AGC67487.1| macro domain-containing protein [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 173
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 77/126 (61%), Gaps = 11/126 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L+I GDI++ +DAIV+ N+ LL GG AIH+AAGP+L + C ++
Sbjct: 4 LEIILGDITKV----ETDAIVNAANKTLLGGGGVDGAIHKAAGPELLEECRRLNG----- 54
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAF 134
C GEA++T G++LP +VIHTVGPV+ + ED +L + Y+N L + I+ IAF
Sbjct: 55 -CETGEAKLTKGYRLPAKYVIHTVGPVWRGGDHGEDGLLAACYRNSLRLAVEYGIKTIAF 113
Query: 135 PAISCG 140
P+IS G
Sbjct: 114 PSISTG 119
>gi|262198417|ref|YP_003269626.1| Appr-1-p processing protein [Haliangium ochraceum DSM 14365]
gi|262081764|gb|ACY17733.1| Appr-1-p processing domain protein [Haliangium ochraceum DSM 14365]
Length = 190
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 67/110 (60%), Gaps = 7/110 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAGP L AC +P C G A+ITPGF+LP
Sbjct: 36 DAIVNAANSSLLGGGGVDGAIHRAAGPALLAAC------RPLGGCATGAAKITPGFELPA 89
Query: 93 SHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
VIHTVGPV+ E ++L S Y+ C+++ + + ++ +AFPAIS GV
Sbjct: 90 RQVIHTVGPVWRGGGEGEPELLASCYRACMALAREHGLRTLAFPAISTGV 139
>gi|51246238|ref|YP_066122.1| hypothetical protein DP2386 [Desulfotalea psychrophila LSv54]
gi|50877275|emb|CAG37115.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
Length = 176
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 67/110 (60%), Gaps = 2/110 (1%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
D IV+ N LL GG AIH+AAGP L AC +I E + VRCP GEARIT +L
Sbjct: 17 DVIVNAANPRLLGGGGVDGAIHQAAGPTLLDACMKIAE-KDGVRCPTGEARITGAGRLAA 75
Query: 93 SHVIHTVGPVFNFH-CNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
+VIHTVGPVF +L SAY N L++ + + IAFPAISCG+
Sbjct: 76 KYVIHTVGPVFKREGAAAAALLESAYTNSLALALEHGCRSIAFPAISCGI 125
>gi|433776133|ref|YP_007306600.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Mesorhizobium australicum WSM2073]
gi|433668148|gb|AGB47224.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Mesorhizobium australicum WSM2073]
Length = 176
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 75/130 (57%), Gaps = 11/130 (8%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
+ ++I GDI++ VD AIV+ N LL GG AIH AAG +L+ C +
Sbjct: 5 QDRIRIHTGDITKLDVD----AIVNAANTSLLGGGGVDGAIHRAAGRELEFECRMLNG-- 58
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
C G+A+IT G+KLP HVIHTVGPV+ E ++L S Y+ L + AN+ +
Sbjct: 59 ----CKVGDAKITSGYKLPARHVIHTVGPVWQGGGKGEAELLASCYRRSLDIAVANDCRS 114
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 115 VAFPAISTGV 124
>gi|302797761|ref|XP_002980641.1| hypothetical protein SELMODRAFT_113024 [Selaginella moellendorffii]
gi|302818671|ref|XP_002991008.1| hypothetical protein SELMODRAFT_132899 [Selaginella moellendorffii]
gi|300141102|gb|EFJ07816.1| hypothetical protein SELMODRAFT_132899 [Selaginella moellendorffii]
gi|300151647|gb|EFJ18292.1| hypothetical protein SELMODRAFT_113024 [Selaginella moellendorffii]
Length = 223
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 77/136 (56%), Gaps = 4/136 (2%)
Query: 9 SFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQI 68
S +L + KGDI W VD +DAIV+P N+ + G AIH AAGP L A ++
Sbjct: 40 KLSDHCTLVMWKGDIVIWHVDGQTDAIVAPANKKVNAGLGINGAIHRAAGPRLADAGAKL 99
Query: 69 PEAQPR-VRCPPGEARITPGFKLPVSHVIHTVGPVFNFH--CNPEDILRSAYKNCLSVGK 125
P+ P+ V+C G A +T F L VS VIH V PV+ +P D L SAY++ L +
Sbjct: 100 PDMAPQGVKCVIGAAVVTRAFNLKVSRVIHAVAPVYQERDDASPRD-LNSAYRSALELAN 158
Query: 126 ANNIQYIAFPAISCGV 141
++YI F A+SCG+
Sbjct: 159 REGVKYICFAAMSCGL 174
>gi|148654144|ref|YP_001281237.1| appr-1-p processing domain-containing protein [Psychrobacter sp.
PRwf-1]
gi|148573228|gb|ABQ95287.1| Appr-1-p processing domain protein [Psychrobacter sp. PRwf-1]
Length = 194
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 78/128 (60%), Gaps = 11/128 (8%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+L + + DI+ VD AIV+ N LL GG AIH AAGP+L C +
Sbjct: 25 TLTLIQADITTLKVD----AIVNAANSSLLGGGGVDGAIHRAAGPELVAYCRTLN----- 75
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIA 133
C GEA+I+PGFKLP +VI+TVGPV++ E ++L S Y+N L++ + ++I+ IA
Sbjct: 76 -GCATGEAKISPGFKLPAQYVIYTVGPVWHGGNQGEPELLASCYRNSLALAQQHDIKSIA 134
Query: 134 FPAISCGV 141
FPAIS GV
Sbjct: 135 FPAISTGV 142
>gi|313900927|ref|ZP_07834417.1| macro domain protein [Clostridium sp. HGF2]
gi|422328345|ref|ZP_16409371.1| hypothetical protein HMPREF0981_02691 [Erysipelotrichaceae
bacterium 6_1_45]
gi|312954347|gb|EFR36025.1| macro domain protein [Clostridium sp. HGF2]
gi|371660774|gb|EHO26019.1| hypothetical protein HMPREF0981_02691 [Erysipelotrichaceae
bacterium 6_1_45]
Length = 168
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 76/127 (59%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+KI GDI+ VD AIV+ N LL GG AIH AAGP+L + C +
Sbjct: 3 IKILSGDITTLQVD----AIVNAANVSLLGGGGVDGAIHRAAGPELLEECRTLH------ 52
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
C GEA+IT G++LP S+VIHT GP++ + E ++L S Y++C+ + K +I IAF
Sbjct: 53 GCKTGEAKITKGYRLPCSYVIHTPGPIWQGGNHGECELLESCYRSCMKLAKEYHITSIAF 112
Query: 135 PAISCGV 141
PAIS GV
Sbjct: 113 PAISTGV 119
>gi|350419095|ref|XP_003492069.1| PREDICTED: MACRO domain-containing protein 2-like isoform 2 [Bombus
impatiens]
Length = 271
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 71/122 (58%), Gaps = 13/122 (10%)
Query: 23 ISRWCVDRSS---DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPP 79
IS W D +S DAIV+ N LL GG AIH+AAGP+L+K C + C
Sbjct: 106 ISIWQGDITSLEIDAIVNAANSSLLGGGGVDGAIHKAAGPNLKKECATLG------GCRV 159
Query: 80 GEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISC 139
GEA+IT + LP HVIHTVGP PE L+ Y+N L+V KAN ++ IAFP IS
Sbjct: 160 GEAKITGAYMLPAKHVIHTVGPQGE---KPEK-LKECYENSLTVAKANELRTIAFPCIST 215
Query: 140 GV 141
G+
Sbjct: 216 GI 217
>gi|86157238|ref|YP_464023.1| Appr-1-p processing [Anaeromyxobacter dehalogenans 2CP-C]
gi|85773749|gb|ABC80586.1| Appr-1-p processing [Anaeromyxobacter dehalogenans 2CP-C]
Length = 177
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 73/126 (57%), Gaps = 11/126 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ + +GDI+R VD AIV+ N LL GG AIH AAGP+L +AC + A+
Sbjct: 10 IALVQGDITRLHVD----AIVNAANATLLGGGGVDGAIHRAAGPELLEACRALGGART-- 63
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAF 134
GEA+ITPGF+L HVIH VGPV+ ED L S Y+ + + + ++ IAF
Sbjct: 64 ----GEAKITPGFRLAARHVIHAVGPVWRGGGAGEDAALASCYRASMRLAAEHGLRSIAF 119
Query: 135 PAISCG 140
PAIS G
Sbjct: 120 PAISTG 125
>gi|154245828|ref|YP_001416786.1| appr-1-p processing domain-containing protein [Xanthobacter
autotrophicus Py2]
gi|154159913|gb|ABS67129.1| Appr-1-p processing domain protein [Xanthobacter autotrophicus Py2]
Length = 193
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 74/130 (56%), Gaps = 11/130 (8%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
+ L I GDI+R +D AIV+ N LL GG AIH AAGP+L C +
Sbjct: 19 QARLDIVVGDITRLALD----AIVNAANSSLLGGGGVDGAIHRAAGPELLAYCRTLGG-- 72
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFN-FHCNPEDILRSAYKNCLSVGKANNIQY 131
CP GEAR+TPGF+LP +HVIHTVGPV++ E +L S Y+ L + +
Sbjct: 73 ----CPTGEARLTPGFRLPAAHVIHTVGPVWHGGGAGEEGLLGSCYRESLKLADGAGLAS 128
Query: 132 IAFPAISCGV 141
IAFPAIS G+
Sbjct: 129 IAFPAISTGI 138
>gi|258404687|ref|YP_003197429.1| Appr-1-p processing protein [Desulfohalobium retbaense DSM 5692]
gi|257796914|gb|ACV67851.1| Appr-1-p processing domain protein [Desulfohalobium retbaense DSM
5692]
Length = 188
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 72/131 (54%), Gaps = 7/131 (5%)
Query: 12 TKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEA 71
+ L+I +GDI+ V A+V+ N L GG A+ AAGP L +A +
Sbjct: 9 SHGRLEIRQGDITAAEVG----AVVNAANSRLAGGGGVDGALQRAAGPQLLQAGQEYVRE 64
Query: 72 QPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHC-NPEDILRSAYKNCLSVGKANNIQ 130
+ G+A +TPGF LP S VIHTVGP++ N E +L AY NCL V K IQ
Sbjct: 65 HGALSV--GDAVVTPGFALPASQVIHTVGPIWRGGGHNEEALLERAYANCLQVAKDQGIQ 122
Query: 131 YIAFPAISCGV 141
IAFPAISCGV
Sbjct: 123 SIAFPAISCGV 133
>gi|45659116|ref|YP_003202.1| hypothetical protein LIC13295 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|417771361|ref|ZP_12419256.1| RNase III regulator YmdB [Leptospira interrogans serovar Pomona
str. Pomona]
gi|418667271|ref|ZP_13228683.1| RNase III regulator YmdB [Leptospira interrogans serovar Pyrogenes
str. 2006006960]
gi|418683301|ref|ZP_13244506.1| RNase III regulator YmdB [Leptospira interrogans serovar Pomona
str. Kennewicki LC82-25]
gi|418704021|ref|ZP_13264901.1| RNase III regulator YmdB [Leptospira interrogans serovar Hebdomadis
str. R499]
gi|421083581|ref|ZP_15544455.1| RNase III regulator YmdB [Leptospira santarosai str. HAI1594]
gi|421101510|ref|ZP_15562122.1| RNase III regulator YmdB [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|421115531|ref|ZP_15575936.1| RNase III regulator YmdB [Leptospira interrogans serovar Canicola
str. Fiocruz LV133]
gi|73921110|sp|Q72M93.1|Y3295_LEPIC RecName: Full=Macro domain-containing protein LIC_13295
gi|45602362|gb|AAS71839.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|400324874|gb|EJO77158.1| RNase III regulator YmdB [Leptospira interrogans serovar Pomona
str. Kennewicki LC82-25]
gi|409946558|gb|EKN96567.1| RNase III regulator YmdB [Leptospira interrogans serovar Pomona
str. Pomona]
gi|410012833|gb|EKO70919.1| RNase III regulator YmdB [Leptospira interrogans serovar Canicola
str. Fiocruz LV133]
gi|410368682|gb|EKP24058.1| RNase III regulator YmdB [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410433942|gb|EKP78279.1| RNase III regulator YmdB [Leptospira santarosai str. HAI1594]
gi|410756874|gb|EKR18492.1| RNase III regulator YmdB [Leptospira interrogans serovar Pyrogenes
str. 2006006960]
gi|410766243|gb|EKR36930.1| RNase III regulator YmdB [Leptospira interrogans serovar Hebdomadis
str. R499]
gi|456824137|gb|EMF72574.1| RNase III regulator YmdB [Leptospira interrogans serovar Canicola
str. LT1962]
gi|456987351|gb|EMG22674.1| RNase III regulator YmdB [Leptospira interrogans serovar
Copenhageni str. LT2050]
Length = 175
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 78/129 (60%), Gaps = 7/129 (5%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
+K+ K DI++ VD AIV+ N LL GG AIH A GP++ + CY+I E Q
Sbjct: 3 NKIKLIKEDITQLEVD----AIVNAANSSLLGGGGVDGAIHRAGGPEILEECYKIREKQG 58
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFN-FHCNPEDILRSAYKNCLSVGKANNIQYI 132
C GEA IT +L +IHTVGP+++ + N +++L +AYKN L + K ++++ I
Sbjct: 59 --ECKVGEAVITTAGRLNAKFIIHTVGPIWSGGNKNEDELLSNAYKNSLLLAKNHSLKTI 116
Query: 133 AFPAISCGV 141
AFP IS G+
Sbjct: 117 AFPNISTGI 125
>gi|357621137|gb|EHJ73076.1| LRP16 protein [Danaus plexippus]
Length = 252
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 83/149 (55%), Gaps = 19/149 (12%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ I KGDI++ VD AIV+ N L+ GG AIH AAGP LQ C +
Sbjct: 80 VSIFKGDITKLEVD----AIVNAANSRLIAGGGVDGAIHRAAGPMLQAECNTLG------ 129
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFP 135
CP GEARIT G+ LP ++VIHTVGP N L+S Y+NC ++ K ++ IAFP
Sbjct: 130 GCPTGEARITCGYNLPANYVIHTVGPQNGSAPN----LKSCYENCFALVKQYELKTIAFP 185
Query: 136 AISCGV----SQIMTHAIKLQTNCGFLES 160
IS G+ +++ H I L++ FLE
Sbjct: 186 CISTGIYGFPNRLAAH-IALRSARKFLED 213
>gi|24216832|ref|NP_714313.1| Macro domain-containing protein [Leptospira interrogans serovar Lai
str. 56601]
gi|386075721|ref|YP_005990041.1| Macro domain-containing protein [Leptospira interrogans serovar Lai
str. IPAV]
gi|418692138|ref|ZP_13253219.1| RNase III regulator YmdB [Leptospira interrogans str. FPW2026]
gi|418702369|ref|ZP_13263277.1| RNase III regulator YmdB [Leptospira interrogans serovar Bataviae
str. L1111]
gi|421121853|ref|ZP_15582143.1| RNase III regulator YmdB [Leptospira interrogans str. Brem 329]
gi|421126277|ref|ZP_15586514.1| RNase III regulator YmdB [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|421135528|ref|ZP_15595649.1| RNase III regulator YmdB [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|73921126|sp|Q8EYT0.1|Y4133_LEPIN RecName: Full=Macro domain-containing protein LA_4133
gi|24198203|gb|AAN51331.1| Macro domain-containing protein [Leptospira interrogans serovar Lai
str. 56601]
gi|353459513|gb|AER04058.1| Macro domain-containing protein [Leptospira interrogans serovar Lai
str. IPAV]
gi|400358201|gb|EJP14317.1| RNase III regulator YmdB [Leptospira interrogans str. FPW2026]
gi|410020192|gb|EKO86996.1| RNase III regulator YmdB [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410345190|gb|EKO96309.1| RNase III regulator YmdB [Leptospira interrogans str. Brem 329]
gi|410436227|gb|EKP85346.1| RNase III regulator YmdB [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|410758538|gb|EKR24767.1| RNase III regulator YmdB [Leptospira interrogans serovar Bataviae
str. L1111]
gi|455792145|gb|EMF43914.1| RNase III regulator YmdB [Leptospira interrogans serovar Lora str.
TE 1992]
Length = 175
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 78/129 (60%), Gaps = 7/129 (5%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
+K+ K DI++ VD AIV+ N LL GG AIH A GP++ + CY+I E Q
Sbjct: 3 NKIKLIKEDITQLEVD----AIVNAANSSLLGGGGVDGAIHRAGGPEILEECYKIREKQG 58
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFN-FHCNPEDILRSAYKNCLSVGKANNIQYI 132
C GEA IT +L +IHTVGP+++ + N +++L +AYKN L + K ++++ I
Sbjct: 59 --ECKVGEAVITTAGRLNAKFIIHTVGPIWSGGNKNEDELLSNAYKNSLLLAKNHSLKTI 116
Query: 133 AFPAISCGV 141
AFP IS G+
Sbjct: 117 AFPNISTGI 125
>gi|313115859|ref|ZP_07801291.1| RNase III regulator YmdB [Faecalibacterium cf. prausnitzii KLE1255]
gi|310621813|gb|EFQ05336.1| RNase III regulator YmdB [Faecalibacterium cf. prausnitzii KLE1255]
Length = 175
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 73/134 (54%), Gaps = 10/134 (7%)
Query: 8 LSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQ 67
+S K +++ +GDI++ D IV+ N LL GG AIH AAGP+L C
Sbjct: 2 ISEKVKNQIQVVQGDITKL----DCDCIVNAANRSLLGGGGVDGAIHRAAGPELLAECRT 57
Query: 68 IPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKAN 127
+ C GEA+IT G++L ++IHTVGP+++ L Y+N L + K +
Sbjct: 58 LHG------CRTGEAKITKGYRLKAKYIIHTVGPIYSGTAEDAAQLADCYRNSLDLAKEH 111
Query: 128 NIQYIAFPAISCGV 141
++ IAFPAIS GV
Sbjct: 112 DVHSIAFPAISTGV 125
>gi|374586057|ref|ZP_09659149.1| Appr-1-p processing domain protein [Leptonema illini DSM 21528]
gi|373874918|gb|EHQ06912.1| Appr-1-p processing domain protein [Leptonema illini DSM 21528]
Length = 166
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 70/127 (55%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ + +GDI++ VD AIV+ N LL GG AIH AGP+L C +
Sbjct: 3 IDVLQGDITKLDVD----AIVNAANSSLLGGGGVDGAIHRVAGPELLAECRTLGG----- 53
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
CP GEARIT G++L HVIHTVGP+F E +L S YK+ L + N + +AF
Sbjct: 54 -CPTGEARITGGYRLKARHVIHTVGPIFRGGSQGEAALLASCYKSSLKLAVENGLHSVAF 112
Query: 135 PAISCGV 141
P IS GV
Sbjct: 113 PNISTGV 119
>gi|82777524|ref|YP_403873.1| hypothetical protein SDY_2305 [Shigella dysenteriae Sd197]
gi|309787836|ref|ZP_07682446.1| macro domain protein [Shigella dysenteriae 1617]
gi|123562169|sp|Q32E73.1|YMDB_SHIDS RecName: Full=O-acetyl-ADP-ribose deacetylase; AltName:
Full=Regulator of RNase III activity
gi|81241672|gb|ABB62382.1| putative polyprotein [Shigella dysenteriae Sd197]
gi|308924235|gb|EFP69732.1| macro domain protein [Shigella dysenteriae 1617]
Length = 177
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 74/130 (56%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
KT + + +GDI++ VD IV+ TN L+ GG AIH AAGP L AC ++ + Q
Sbjct: 2 KTRIHVVQGDITKLAVD----VIVNVTNPSLMGGGGVDGAIHRAAGPALLDACLKVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQY 131
CP G A IT LP V+HTVGPV+ ED +L+ AY N L + AN+
Sbjct: 58 G--DCPTGHAVITLAGDLPAKAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVAANSYTS 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 VAFPAISTGV 125
>gi|357038898|ref|ZP_09100694.1| Appr-1-p processing domain protein [Desulfotomaculum gibsoniae DSM
7213]
gi|355358991|gb|EHG06755.1| Appr-1-p processing domain protein [Desulfotomaculum gibsoniae DSM
7213]
Length = 180
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 75/132 (56%), Gaps = 7/132 (5%)
Query: 10 FSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIP 69
S ++ GDI++ + +DAIV+ N LL GG AIH A GP + + C +I
Sbjct: 1 MSNHIRVEFVLGDITK----QDTDAIVNAANSSLLGGGGVDGAIHRAGGPQILQECKEIR 56
Query: 70 EAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANN 128
Q CP G+A IT G LP +VIHTVGPV++ + E +LR +Y NCL + +
Sbjct: 57 SRQGG--CPTGQAVITSGGNLPARYVIHTVGPVWHGGGHGEAALLRESYLNCLRLAREKG 114
Query: 129 IQYIAFPAISCG 140
I+ IAFP+IS G
Sbjct: 115 IKSIAFPSISTG 126
>gi|350419092|ref|XP_003492068.1| PREDICTED: MACRO domain-containing protein 2-like isoform 1 [Bombus
impatiens]
Length = 230
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 71/122 (58%), Gaps = 13/122 (10%)
Query: 23 ISRWCVDRSS---DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPP 79
IS W D +S DAIV+ N LL GG AIH+AAGP+L+K C + C
Sbjct: 65 ISIWQGDITSLEIDAIVNAANSSLLGGGGVDGAIHKAAGPNLKKECATLG------GCRV 118
Query: 80 GEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISC 139
GEA+IT + LP HVIHTVGP PE L+ Y+N L+V KAN ++ IAFP IS
Sbjct: 119 GEAKITGAYMLPAKHVIHTVGPQGE---KPEK-LKECYENSLTVAKANELRTIAFPCIST 174
Query: 140 GV 141
G+
Sbjct: 175 GI 176
>gi|334122515|ref|ZP_08496553.1| RNase III regulator YmdB [Enterobacter hormaechei ATCC 49162]
gi|333392122|gb|EGK63229.1| RNase III regulator YmdB [Enterobacter hormaechei ATCC 49162]
Length = 178
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
+ + + GDI+ VD IV+ N LL GG AIH AAGP L +AC + + Q
Sbjct: 2 RPQIDVIHGDITTVHVD----VIVNAANSSLLGGGGVDGAIHRAAGPQLLEACKTVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
CPPG A IT LP VIHTVGPV++ E +IL AY+NCL + N +
Sbjct: 58 GE--CPPGHAVITLAGDLPAKAVIHTVGPVWHGGDRHEAEILEQAYRNCLRLAADNGYKT 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 MAFPAISTGV 125
>gi|259502239|ref|ZP_05745141.1| RNase III regulator YmdB [Lactobacillus antri DSM 16041]
gi|259169857|gb|EEW54352.1| RNase III regulator YmdB [Lactobacillus antri DSM 16041]
Length = 168
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 86/150 (57%), Gaps = 14/150 (9%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
++++ +GDI+ ++DAIV+ N L+ GG AIH AAGP L AC +
Sbjct: 3 TIQVVEGDITTV----AADAIVNAANTTLMGGGGVDGAIHRAAGPALYAACEKFGG---- 54
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIA 133
CP GEARIT GF LP ++IHT GP+++ + ED +L ++Y+N L++ + + +A
Sbjct: 55 --CPTGEARITSGFNLPAKYIIHTPGPIWHGGDHGEDQLLANSYRNSLTLADEYDCRTVA 112
Query: 134 FPAISCGVSQI---MTHAIKLQTNCGFLES 160
FP+IS GV I +QT FL++
Sbjct: 113 FPSISTGVYSFPLGRAAQIAIQTIREFLQT 142
>gi|359463083|ref|ZP_09251646.1| AraC family regulator [Acaryochloris sp. CCMEE 5410]
Length = 171
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 72/129 (55%), Gaps = 11/129 (8%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T ++I + DI+ VD AIV+ NE LL GG AIH AAGP L C +
Sbjct: 3 TRIEIVQTDITTLQVD----AIVNAANESLLGGGGVDGAIHRAAGPQLLAECRTLK---- 54
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSA-YKNCLSVGKANNIQYI 132
C G A++T G++LP +VIHTVGP++ E IL A Y+ L + N IQ I
Sbjct: 55 --GCKTGHAKLTKGYQLPTKYVIHTVGPIWRGGGANEAILLQACYQRSLELAVDNGIQTI 112
Query: 133 AFPAISCGV 141
AFPAISCGV
Sbjct: 113 AFPAISCGV 121
>gi|388857306|emb|CCF49148.1| related to LRP16 protein [Ustilago hordei]
Length = 222
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 69/123 (56%), Gaps = 12/123 (9%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPG 80
GDI+ +D AIV+ N LL GG AIH AAGPDL K C + C G
Sbjct: 44 GDITTLALD----AIVNAANTSLLGGGGVDGAIHRAAGPDLLKECRTLNG------CSTG 93
Query: 81 EARITPGFKLPVSHVIHTVGPVFN--FHCNPEDILRSAYKNCLSVGKANNIQYIAFPAIS 138
A+ T G+KLP HVIHTVGPV++ H E +LRSAY+ L K + +AFP+IS
Sbjct: 94 SAKTTSGYKLPSKHVIHTVGPVYSKIKHDESEKLLRSAYRTSLEELKRVGGKSVAFPSIS 153
Query: 139 CGV 141
GV
Sbjct: 154 TGV 156
>gi|300918643|ref|ZP_07135225.1| RNase III regulator YmdB [Escherichia coli MS 115-1]
gi|432533270|ref|ZP_19770260.1| hypothetical protein A193_01716 [Escherichia coli KTE234]
gi|300414186|gb|EFJ97496.1| RNase III regulator YmdB [Escherichia coli MS 115-1]
gi|431062390|gb|ELD71658.1| hypothetical protein A193_01716 [Escherichia coli KTE234]
Length = 177
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 74/130 (56%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
KT + + +GDI++ VD IV+ N L+ GG AIH AAGP L AC ++ + Q
Sbjct: 2 KTRIHVVQGDITKLAVD----VIVNAANPSLMGGGGVDGAIHRAAGPALLDACLKVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQY 131
CP G A IT LP V+HTVGPV+ ED +L+ AY N L + +AN+
Sbjct: 58 G--DCPTGHAVITLAGDLPAKAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVEANSFTS 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 VAFPAISTGV 125
>gi|92112452|ref|YP_572380.1| Appr-1-p processing [Chromohalobacter salexigens DSM 3043]
gi|91795542|gb|ABE57681.1| Appr-1-p processing [Chromohalobacter salexigens DSM 3043]
Length = 183
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 72/126 (57%), Gaps = 4/126 (3%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ + GDI+R VD AIV+ N L+ GG AI+ AAGP L++AC + E
Sbjct: 10 VDVVSGDITRLDVD----AIVNAANHSLMGGGGVDGAIYRAAGPALKRACRALRETHWPD 65
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFP 135
P GE +T GF+LP +VIHTVGPV+ + +L + Y+N +++ + IAFP
Sbjct: 66 GLPDGEVALTEGFELPARYVIHTVGPVYAKTRDKSHLLANCYRNAVALAAETGCRRIAFP 125
Query: 136 AISCGV 141
AIS GV
Sbjct: 126 AISTGV 131
>gi|77165303|ref|YP_343828.1| Appr-1-p processing [Nitrosococcus oceani ATCC 19707]
gi|254434137|ref|ZP_05047645.1| Appr-1-p processing enzyme family protein [Nitrosococcus oceani
AFC27]
gi|76883617|gb|ABA58298.1| Appr-1-p processing [Nitrosococcus oceani ATCC 19707]
gi|207090470|gb|EDZ67741.1| Appr-1-p processing enzyme family protein [Nitrosococcus oceani
AFC27]
Length = 173
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 75/127 (59%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ I +GDI++ VD AIV+ N+ LL GG AIH AAGP+L++ C +
Sbjct: 6 ITIMQGDITKMEVD----AIVNAANQTLLGGGGVDGAIHRAAGPELKEECRSLGG----- 56
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAF 134
C GEA++T G++LP ++IHTVGP++ + ED +L Y+N L + A I +AF
Sbjct: 57 -CKTGEAKLTRGYQLPARYIIHTVGPIWKGGQHNEDQLLAQCYRNSLKITLAKKISTLAF 115
Query: 135 PAISCGV 141
P+IS G
Sbjct: 116 PSISTGA 122
>gi|291541374|emb|CBL14484.1| Predicted phosphatase homologous to the C-terminal domain of
histone macroH2A1 [Ruminococcus bromii L2-63]
Length = 325
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 74/129 (57%), Gaps = 15/129 (11%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L+I + DI++ DAIV+ N LL GG AIH AAG +L C ++
Sbjct: 3 LQIVRNDITKM----KCDAIVNAANSSLLGGGGVDGAIHRAAGNELLNECRKLG------ 52
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF---NFHCNPEDILRSAYKNCLSVGKANNIQYI 132
C GEA+IT +KLP +VIHTVGPV+ N+H E++L S Y+N L + KA + +
Sbjct: 53 GCRTGEAKITGAYKLPCKYVIHTVGPVWQGGNYH--EEELLSSCYRNSLQLAKAYECESV 110
Query: 133 AFPAISCGV 141
AFP IS GV
Sbjct: 111 AFPLISSGV 119
>gi|386394527|ref|ZP_10079308.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Desulfovibrio sp. U5L]
gi|385735405|gb|EIG55603.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Desulfovibrio sp. U5L]
Length = 184
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 79/138 (57%), Gaps = 10/138 (7%)
Query: 6 QTLSFSTKTS-LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKA 64
+T +++ T L++ GDI+ +D +DAIV+ N L GG AI AAGP L A
Sbjct: 3 ETAAYAIGTGVLRLIAGDIT---LD-DADAIVNAANSALAGGGGVDGAIQRAAGPRLLAA 58
Query: 65 CYQIPEAQPRV-RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLS 122
C +I + R+ R P G A ITPGF LP HVIHTVGP++ + E + LRSAY L+
Sbjct: 59 CREIID---RIGRLPAGGAVITPGFDLPARHVIHTVGPIWRGGASGEAEALRSAYAESLA 115
Query: 123 VGKANNIQYIAFPAISCG 140
+ ++FPAIS G
Sbjct: 116 RAAEKGLSTVSFPAISTG 133
>gi|307205330|gb|EFN83678.1| MACRO domain-containing protein 2 [Harpegnathos saltator]
Length = 230
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 75/138 (54%), Gaps = 14/138 (10%)
Query: 4 KVQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQK 63
K + + T + I +GDI+ +D AIV+ N LL GG AIH AAG +L+K
Sbjct: 53 KTEEIDEDLATKISIWQGDITSLEID----AIVNAANSSLLGGGGVDGAIHRAAGSNLKK 108
Query: 64 ACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSV 123
C + C GEA+IT G+ LP +V+HTVGP D L+ Y+N L++
Sbjct: 109 ECATLR------GCRVGEAKITGGYMLPAKYVVHTVGP----QGEKPDKLKECYENSLAL 158
Query: 124 GKANNIQYIAFPAISCGV 141
K NN++ IAFP IS G+
Sbjct: 159 AKENNLRTIAFPCISTGI 176
>gi|397689348|ref|YP_006526602.1| Appr-1-p processing protein [Melioribacter roseus P3M]
gi|395810840|gb|AFN73589.1| Appr-1-p processing protein [Melioribacter roseus P3M]
Length = 173
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 80/150 (53%), Gaps = 14/150 (9%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
+ ++I +GDI++ VD AIV+ N LL GG AIH AAGP L + C +
Sbjct: 2 RERIEIIEGDITKLRVD----AIVNAANRSLLGGGGVDGAIHRAAGPGLLEECKTLGG-- 55
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQY 131
C G+A+IT G+ LP VIHTVGPV++ ED +L Y+N L + N ++
Sbjct: 56 ----CETGQAKITKGYNLPAKFVIHTVGPVWSGGNRNEDKLLSDCYRNSLKLAAENKVRT 111
Query: 132 IAFPAISCGVSQI---MTHAIKLQTNCGFL 158
IAFP+IS G + I +QT FL
Sbjct: 112 IAFPSISTGAYRFPFERAARIAVQTTLDFL 141
>gi|442324977|ref|YP_007364998.1| hypothetical protein MYSTI_08048 [Myxococcus stipitatus DSM 14675]
gi|441492619|gb|AGC49314.1| hypothetical protein MYSTI_08048 [Myxococcus stipitatus DSM 14675]
Length = 177
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 75/127 (59%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L++ +GDI+R VD +DAIV+ N LL GG AIH AAGP+L C +
Sbjct: 3 LELIRGDITR--VD--ADAIVNAANSALLGGGGVDGAIHRAAGPELLAECRLLRG----- 53
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAF 134
CP G+AR+T G++LP HVIHTVGPV+ + E +L Y++ ++ + +AF
Sbjct: 54 -CPTGQARLTRGYRLPARHVIHTVGPVWRGGADGESALLARCYQSVFALVEQQGFGTVAF 112
Query: 135 PAISCGV 141
P+IS GV
Sbjct: 113 PSISTGV 119
>gi|298675429|ref|YP_003727179.1| Appr-1-p processing protein [Methanohalobium evestigatum Z-7303]
gi|298288417|gb|ADI74383.1| Appr-1-p processing domain protein [Methanohalobium evestigatum
Z-7303]
Length = 172
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 76/127 (59%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++I +GDI++ ++ DA+V+ N+ L GG AIH AAGP L + C +
Sbjct: 6 IEIIQGDITK----QNVDAVVNAANKSLHGGGGVDGAIHRAAGPQLLEECKNLG------ 55
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAF 134
C GEA+IT +KLP + VIHTVGPV+ + ED +L Y N L++ K NI+ IAF
Sbjct: 56 GCETGEAKITNAYKLPANWVIHTVGPVWKGGGHHEDELLAKCYINSLTLAKQYNIKTIAF 115
Query: 135 PAISCGV 141
PAIS GV
Sbjct: 116 PAISTGV 122
>gi|297622784|ref|YP_003704218.1| Appr-1-p processing protein [Truepera radiovictrix DSM 17093]
gi|297163964|gb|ADI13675.1| Appr-1-p processing domain protein [Truepera radiovictrix DSM
17093]
Length = 169
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 74/126 (58%), Gaps = 11/126 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ + +GDI+ VD AIV+ N LL GG AIH AAGP+L AC +
Sbjct: 1 MTLIRGDITEMRVD----AIVNAANSSLLGGGGVDGAIHRAAGPELLAACRTLGG----- 51
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAF 134
CP GEA++TPG+ L VIHTVGPV+ + ED +L Y++C ++ + + ++ +AF
Sbjct: 52 -CPTGEAKLTPGYNLSARFVIHTVGPVWRGGAHREDELLARCYRSCFALAREHALRSLAF 110
Query: 135 PAISCG 140
P+IS G
Sbjct: 111 PSISTG 116
>gi|146339793|ref|YP_001204841.1| Appr-1-p processing enzyme family protein [Bradyrhizobium sp. ORS
278]
gi|146192599|emb|CAL76604.1| conserved hypothetical protein; putative Appr-1-p processing enzyme
family protein [Bradyrhizobium sp. ORS 278]
Length = 189
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 79/142 (55%), Gaps = 14/142 (9%)
Query: 1 MTFKVQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPD 60
M+++V+T+ T ++ DI++ VD AIV+ N LL GG AIH AAGPD
Sbjct: 1 MSYRVRTIG---ATRFEVVTADITKLGVD----AIVNAANSSLLGGGGVDGAIHRAAGPD 53
Query: 61 LQKACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKN 119
L C + C GEA+IT G++LP HVIHTVGPV+ E ++L S Y+
Sbjct: 54 LAMECRMLHG------CKTGEAKITKGYRLPARHVIHTVGPVWQGGDRGEPELLASCYRR 107
Query: 120 CLSVGKANNIQYIAFPAISCGV 141
+ + + + +AFPAIS G+
Sbjct: 108 SIELCHKHLLDSVAFPAISTGI 129
>gi|21226279|ref|NP_632201.1| hypothetical protein MM_0177 [Methanosarcina mazei Go1]
gi|25453318|sp|Q8Q0F9.1|Y177_METMA RecName: Full=Macro domain-containing protein MM_0177
gi|20904522|gb|AAM29873.1| conserved protein [Methanosarcina mazei Go1]
Length = 187
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 72/126 (57%), Gaps = 11/126 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++I +GDI + VD AIV+ N LL GG AIH AAGP L + C +
Sbjct: 21 IRIFEGDIVKMRVD----AIVNAANNTLLGGGGVDGAIHRAAGPALLEECKTLNG----- 71
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAF 134
CP GEA+IT G+ LP ++IHTVGPV+ ED +L S Y+ L + + I+ IAF
Sbjct: 72 -CPTGEAKITSGYLLPAKYIIHTVGPVWQGGEKGEDELLASCYRKSLELARDYKIKTIAF 130
Query: 135 PAISCG 140
PAIS G
Sbjct: 131 PAISTG 136
>gi|218437455|ref|YP_002375784.1| Appr-1-p processing protein [Cyanothece sp. PCC 7424]
gi|218170183|gb|ACK68916.1| Appr-1-p processing domain protein [Cyanothece sp. PCC 7424]
Length = 175
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 75/131 (57%), Gaps = 11/131 (8%)
Query: 12 TKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEA 71
+K + +GDI++ V+ AIV+ N LL GG AIH AAGP L + C ++
Sbjct: 2 SKKQILALQGDITKQAVE----AIVNAANNTLLGGGGVDGAIHRAAGPQLLEECRRLN-- 55
Query: 72 QPRVRCPPGEARITPGFKLPVSHVIHTVGPVFN-FHCNPEDILRSAYKNCLSVGKANNIQ 130
C GEA+IT G++LP VIHTVGPV+ + E++L S Y+ L++ N I
Sbjct: 56 ----GCETGEAKITSGYRLPARWVIHTVGPVWQGGNEGEEELLASCYRKSLALAAENQIV 111
Query: 131 YIAFPAISCGV 141
IAFPAIS GV
Sbjct: 112 SIAFPAISTGV 122
>gi|238028710|ref|YP_002912941.1| Appr-1-p processing enzyme family domain-containing protein
[Burkholderia glumae BGR1]
gi|237877904|gb|ACR30237.1| Appr-1-p processing enzyme family domain-containing protein
[Burkholderia glumae BGR1]
Length = 173
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 65/110 (59%), Gaps = 7/110 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ NE LL GG AIH AAGPDL C + C G+A++T G++LP
Sbjct: 22 DAIVNAANESLLGGGGVDGAIHRAAGPDLLAECRTLGG------CATGDAKLTRGYQLPA 75
Query: 93 SHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
HVIHTVGPV++ + E + L S Y+ L V A +AFPAISCGV
Sbjct: 76 RHVIHTVGPVWHGGMSGEAEQLASCYRRSLEVAAAAGCVSVAFPAISCGV 125
>gi|295096250|emb|CBK85340.1| Predicted phosphatase homologous to the C-terminal domain of
histone macroH2A1 [Enterobacter cloacae subsp. cloacae
NCTC 9394]
Length = 178
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
+ + + GDI+ VD IV+ N L+ GG AIH AAGP L +AC + + Q
Sbjct: 2 RPQIDVIHGDITTVHVD----VIVNAANSSLMGGGGVDGAIHRAAGPQLLEACKTVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
CPPG A IT LP VIHTVGPV++ E +IL AY+NCL + N +
Sbjct: 58 GE--CPPGHAVITLAGDLPAKAVIHTVGPVWHGGDRHEAEILEQAYRNCLRLAADNGYKT 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 MAFPAISTGV 125
>gi|328773082|gb|EGF83119.1| hypothetical protein BATDEDRAFT_8306 [Batrachochytrium
dendrobatidis JAM81]
Length = 192
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 73/133 (54%), Gaps = 10/133 (7%)
Query: 9 SFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQI 68
+T K S+GDI+ VD AIV+ N LL GG AIH AG +L + C ++
Sbjct: 6 GIATDNCCKYSRGDITELPVD----AIVNAANNSLLGGGGVDGAIHRKAGRELLEECIKL 61
Query: 69 PEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANN 128
CP G+A++T G+ LP HVIHTVGP+ + ++L S Y L+V K N
Sbjct: 62 DG------CPTGQAKLTRGYNLPSPHVIHTVGPIIRGNQLQPNVLASCYTASLNVAKHNQ 115
Query: 129 IQYIAFPAISCGV 141
I+ IAFP IS G+
Sbjct: 116 IKSIAFPCISTGI 128
>gi|288574251|ref|ZP_06392608.1| Appr-1-p processing domain protein [Dethiosulfovibrio peptidovorans
DSM 11002]
gi|288569992|gb|EFC91549.1| Appr-1-p processing domain protein [Dethiosulfovibrio peptidovorans
DSM 11002]
Length = 169
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 76/127 (59%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ + +GDI+ VD A+V+ N LL GG AIH AAGP+L KAC +P
Sbjct: 6 IALVRGDITEMDVD----AVVNAANTSLLGGGGVDGAIHRAAGPELLKAC------RPLG 55
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
C G+A+IT G+ LP +VIHT GPV+ + E ++L S Y+ L + + ++ + +AF
Sbjct: 56 GCATGDAKITMGYGLPARYVIHTPGPVWQGGNSGEAELLASCYRRSLELARDHDCKTVAF 115
Query: 135 PAISCGV 141
PAISCGV
Sbjct: 116 PAISCGV 122
>gi|419957531|ref|ZP_14473597.1| RNase III inhibitor [Enterobacter cloacae subsp. cloacae GS1]
gi|388607689|gb|EIM36893.1| RNase III inhibitor [Enterobacter cloacae subsp. cloacae GS1]
Length = 178
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
+ + + GDI+ VD IV+ N L+ GG AIH AAGP L +AC + + Q
Sbjct: 2 RPQIDVIHGDITTVHVD----VIVNAANSSLMGGGGVDGAIHRAAGPQLLEACKTVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
CPPG A IT LP VIHTVGPV++ E +IL AY+NCL + N +
Sbjct: 58 GE--CPPGHAVITLAGDLPAKAVIHTVGPVWHGGDRHEAEILEQAYRNCLRLAADNGYKT 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 MAFPAISTGV 125
>gi|322709956|gb|EFZ01531.1| hypothetical protein MAA_02760 [Metarhizium anisopliae ARSEF 23]
Length = 258
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 78/135 (57%), Gaps = 12/135 (8%)
Query: 9 SFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQI 68
S S + + + +GDI++ +D AIV+ N LL GG AIH AAGP+L C I
Sbjct: 40 STSINSRVGLIRGDITKLQLD----AIVNAANTTLLGGGGVDGAIHRAAGPELLYECRGI 95
Query: 69 PEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFH--CNPEDILRSAYKNCLSVGKA 126
C G+AR+T G++LP HVIHTVGP+++ E++LRS Y+ L + +
Sbjct: 96 GG------CSTGDARLTKGYELPAKHVIHTVGPIYDRRHPQTSENLLRSCYQTSLGLAVS 149
Query: 127 NNIQYIAFPAISCGV 141
+ I+ +AF AIS GV
Sbjct: 150 SGIKTLAFSAISTGV 164
>gi|257439694|ref|ZP_05615449.1| RNase III regulator YmdB [Faecalibacterium prausnitzii A2-165]
gi|257197834|gb|EEU96118.1| macro domain protein [Faecalibacterium prausnitzii A2-165]
Length = 176
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 76/131 (58%), Gaps = 14/131 (10%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K +++ +GDI++ D IV+ N LL GG AIH AAGP+L C +
Sbjct: 10 KNQIQVVQGDITKL----DCDCIVNAANRSLLGGGGVDGAIHRAAGPELLAECRTLHG-- 63
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSA--YKNCLSVGKANNIQ 130
C GEA+IT G++L V ++IHTVGP+++ PED ++ A Y+N L + K +I
Sbjct: 64 ----CRTGEAKITRGYRLKVKYIIHTVGPIYSG--TPEDAVQLADCYRNSLELAKTYDIH 117
Query: 131 YIAFPAISCGV 141
IAFPAIS GV
Sbjct: 118 SIAFPAISTGV 128
>gi|134300470|ref|YP_001113966.1| appr-1-p processing domain-containing protein [Desulfotomaculum
reducens MI-1]
gi|134053170|gb|ABO51141.1| Appr-1-p processing domain protein [Desulfotomaculum reducens MI-1]
Length = 177
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 77/133 (57%), Gaps = 13/133 (9%)
Query: 12 TKTSLKIS--KGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIP 69
TK + +IS +GDI++ VD AIV+ N LL GG AIH AAGP L + C ++
Sbjct: 8 TKVTDRISLIEGDITKLKVD----AIVNAANTSLLGGGGVDGAIHLAAGPALLEECRKLN 63
Query: 70 EAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANN 128
CP GEA+IT G+ LP VIHT GP++ N E +L + Y+N L++ N
Sbjct: 64 G------CPTGEAKITAGYNLPARWVIHTPGPIWRGGQNNEESLLTNCYRNSLNLAVKNE 117
Query: 129 IQYIAFPAISCGV 141
I+ IAFP IS G+
Sbjct: 118 IKTIAFPLISAGI 130
>gi|340708874|ref|XP_003393043.1| PREDICTED: MACRO domain-containing protein 2-like isoform 1 [Bombus
terrestris]
gi|340708876|ref|XP_003393044.1| PREDICTED: MACRO domain-containing protein 2-like isoform 2 [Bombus
terrestris]
Length = 230
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 71/122 (58%), Gaps = 13/122 (10%)
Query: 23 ISRWCVDRSS---DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPP 79
IS W D +S DAIV+ N LL GG AIH+AAGP+L+K C + C
Sbjct: 65 ISIWQGDITSLEIDAIVNAANSSLLGGGGVDGAIHKAAGPNLKKECATLG------GCRV 118
Query: 80 GEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISC 139
GEA+IT + LP HVIHTVGP PE L+ Y+N L+V +AN ++ IAFP IS
Sbjct: 119 GEAKITGAYMLPAKHVIHTVGPQGE---KPEK-LKECYENSLTVARANELRTIAFPCIST 174
Query: 140 GV 141
G+
Sbjct: 175 GI 176
>gi|433608382|ref|YP_007040751.1| Appr-1-p processing domain protein [Saccharothrix espanaensis DSM
44229]
gi|407886235|emb|CCH33878.1| Appr-1-p processing domain protein [Saccharothrix espanaensis DSM
44229]
Length = 177
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 75/130 (57%), Gaps = 13/130 (10%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
++++ +GDI+R VD A+V+ NE LL GG A+H AAGP L +A ++
Sbjct: 9 TIEVVQGDITRQAVD----AVVTAANESLLGGGGVDGAVHRAAGPRLAEAGARV------ 58
Query: 75 VRCPPGEARITPGFKL--PVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
C PG+A TP F L PV HVIHTVGPV+ E D+L S Y+ L V ++
Sbjct: 59 APCAPGDAIATPAFDLPPPVQHVIHTVGPVWEGGGRGEADVLVSCYRRSLEVADELGVRS 118
Query: 132 IAFPAISCGV 141
+AFPAI+ GV
Sbjct: 119 VAFPAIATGV 128
>gi|20090472|ref|NP_616547.1| hypothetical protein MA1614 [Methanosarcina acetivorans C2A]
gi|25453342|sp|Q8TQD0.1|Y1614_METAC RecName: Full=Macro domain-containing protein MA_1614
gi|19915491|gb|AAM05027.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 195
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 75/144 (52%), Gaps = 12/144 (8%)
Query: 3 FKVQTLSFSTKTSLKISKGD-----ISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAA 57
+K + S K SL +S+ I R + DAIV+ N LL GG AIH AA
Sbjct: 7 YKKELKRNSRKRSLNMSQNSERIRIIERDITELKVDAIVNAANNTLLGGGGVDGAIHRAA 66
Query: 58 GPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSA 116
GP L + C + CP GEA+IT G+ LP +VIHTVGP++ ED L S
Sbjct: 67 GPGLLEECRTLNG------CPTGEAKITKGYLLPAKYVIHTVGPIWQEGTKGEDEFLASC 120
Query: 117 YKNCLSVGKANNIQYIAFPAISCG 140
Y+ L + + +++ IAFP IS G
Sbjct: 121 YRKSLELARKYDVKTIAFPTISTG 144
>gi|153869301|ref|ZP_01998946.1| protein containing Appr-1-p processing domain [Beggiatoa sp. PS]
gi|152074181|gb|EDN71064.1| protein containing Appr-1-p processing domain [Beggiatoa sp. PS]
Length = 170
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 72/129 (55%), Gaps = 11/129 (8%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T LK+ DI+ VD AIV+ N LL GG AIH AAGP L C +
Sbjct: 3 TELKLINDDITTLAVD----AIVNAANNTLLGGGGVDGAIHRAAGPQLLAECRTLD---- 54
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
CP G+A+IT G++LP VIHTVGP++ + E +L + Y N L + + ++ I
Sbjct: 55 --GCPTGQAKITQGYQLPAKQVIHTVGPIWRGGRHDEPTLLANCYLNSLQLALEHQLKTI 112
Query: 133 AFPAISCGV 141
AFPAISCG+
Sbjct: 113 AFPAISCGI 121
>gi|157160570|ref|YP_001457888.1| hypothetical protein EcHS_A1166 [Escherichia coli HS]
gi|188492778|ref|ZP_03000048.1| appr-1-p processing enzyme domain protein [Escherichia coli 53638]
gi|312971180|ref|ZP_07785358.1| macro domain protein [Escherichia coli 1827-70]
gi|386613419|ref|YP_006133085.1| RNase III regulator YmdB [Escherichia coli UMNK88]
gi|419174656|ref|ZP_13718507.1| regulator of RNase III activity [Escherichia coli DEC7B]
gi|157066250|gb|ABV05505.1| appr-1-p processing enzyme domain protein [Escherichia coli HS]
gi|188487977|gb|EDU63080.1| appr-1-p processing enzyme domain protein [Escherichia coli 53638]
gi|310336382|gb|EFQ01568.1| macro domain protein [Escherichia coli 1827-70]
gi|332342588|gb|AEE55922.1| RNase III regulator YmdB [Escherichia coli UMNK88]
gi|378036510|gb|EHV99053.1| regulator of RNase III activity [Escherichia coli DEC7B]
Length = 177
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
KT + + +GDI++ VD IV+ N L+ GG AIH AAGP L AC ++ + Q
Sbjct: 2 KTRIHVVQGDITKLAVD----VIVNAANPSLMGGGGVDGAIHRAAGPALLDACLKVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQY 131
CP G A IT LP V+HTVGPV+ ED +L+ AY N L + AN+
Sbjct: 58 G--DCPTGHAVITLAGDLPAKAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVAANSFTS 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 VAFPAISTGV 125
>gi|256420833|ref|YP_003121486.1| Appr-1-p processing protein [Chitinophaga pinensis DSM 2588]
gi|256035741|gb|ACU59285.1| Appr-1-p processing domain protein [Chitinophaga pinensis DSM 2588]
Length = 172
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 73/123 (59%), Gaps = 7/123 (5%)
Query: 20 KGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPP 79
+GDI++ VD AIV+ N LL GG AIH A GP + + C +I + Q R C
Sbjct: 7 QGDITQIKVD----AIVNAANSSLLGGGGVDGAIHRAGGPAILEECRRIRDRQGR--CAT 60
Query: 80 GEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAFPAIS 138
GEA IT KLP +VIHTVGPV+N + E +LR+AY N L + + ++ IAFP IS
Sbjct: 61 GEAVITTAGKLPAKYVIHTVGPVWNKGNDEEKRLLRNAYINSLLLAVKHGVETIAFPNIS 120
Query: 139 CGV 141
GV
Sbjct: 121 TGV 123
>gi|418710087|ref|ZP_13270869.1| RNase III regulator YmdB [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|410769545|gb|EKR44776.1| RNase III regulator YmdB [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|456971823|gb|EMG12355.1| RNase III regulator YmdB [Leptospira interrogans serovar
Grippotyphosa str. LT2186]
Length = 175
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 77/129 (59%), Gaps = 7/129 (5%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
+K+ K DI++ VD AIV+ N LL GG AIH GP++ + CY+I E Q
Sbjct: 3 NKIKLIKEDITKLEVD----AIVNAANSSLLGGGGVDGAIHRVGGPEILEECYKIREKQG 58
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFN-FHCNPEDILRSAYKNCLSVGKANNIQYI 132
C GEA IT +L +IHTVGP+++ + N +++L +AYKN L + K ++++ I
Sbjct: 59 --ECKVGEAVITTAGRLNAKFIIHTVGPIWSGGNKNEDELLSNAYKNSLLLAKNHSLKTI 116
Query: 133 AFPAISCGV 141
AFP IS G+
Sbjct: 117 AFPNISTGI 125
>gi|432860867|ref|ZP_20085951.1| hypothetical protein A311_01679 [Escherichia coli KTE146]
gi|431406876|gb|ELG90095.1| hypothetical protein A311_01679 [Escherichia coli KTE146]
Length = 177
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 74/130 (56%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
KT + + +GDI++ VD IV+ N L+ GG AIH AAGP L AC ++ + Q
Sbjct: 2 KTRIHVVQGDITKLAVD----VIVNAANPSLMGGGGVDGAIHRAAGPALLDACLKVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQY 131
CP G A IT LP V+HTVGPV++ ED +L+ AY N L + AN+
Sbjct: 58 G--DCPTGHAVITLAGDLPAKAVVHTVGPVWSGGEQNEDQLLQDAYLNSLRLVAANSYTS 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 VAFPAISTGV 125
>gi|395232108|ref|ZP_10410360.1| RNase III inhibitor [Enterobacter sp. Ag1]
gi|394733612|gb|EJF33229.1| RNase III inhibitor [Enterobacter sp. Ag1]
Length = 176
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 75/127 (59%), Gaps = 7/127 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ +GDI++ VD IV+ N L+ GG AIH AAGP L +AC + + Q
Sbjct: 5 IQVVQGDITQIEVD----VIVNAANPSLMGGGGVDGAIHRAAGPALLEACKAVRQLQGE- 59
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFN-FHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
CPPG+A IT +PV VIH VGPV++ N ++L AY+N L + AN + IAF
Sbjct: 60 -CPPGQAVITEAGNIPVKAVIHAVGPVWHGGEQNEAELLELAYRNSLDLAAANGYRSIAF 118
Query: 135 PAISCGV 141
PAIS GV
Sbjct: 119 PAISTGV 125
>gi|294102575|ref|YP_003554433.1| Appr-1-p processing protein [Aminobacterium colombiense DSM 12261]
gi|293617555|gb|ADE57709.1| Appr-1-p processing domain protein [Aminobacterium colombiense DSM
12261]
Length = 169
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 74/127 (58%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ KGDI++ VD AIV+ N LL GG AIH AAGP+L + C +
Sbjct: 5 IELLKGDITKVEVD----AIVNAANTTLLGGGGVDGAIHRAAGPELLEECSTLG------ 54
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
C G+A+IT G++LP +VIHT GPV+ E D+L S Y+ L + N + +AF
Sbjct: 55 GCATGDAKITKGYRLPARYVIHTPGPVWRGGTKGEPDLLASCYRKSLELAVENGCKSVAF 114
Query: 135 PAISCGV 141
P+ISCGV
Sbjct: 115 PSISCGV 121
>gi|336249725|ref|YP_004593435.1| RNase III inhibitor [Enterobacter aerogenes KCTC 2190]
gi|334735781|gb|AEG98156.1| RNase III inhibitor [Enterobacter aerogenes KCTC 2190]
Length = 174
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 80/149 (53%), Gaps = 10/149 (6%)
Query: 17 KISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVR 76
++ GDI+ VD IV+ N LL GG AIH AAGP+L AC + + Q
Sbjct: 6 EVVLGDITTLQVD----VIVNAANPSLLGGGGVDGAIHRAAGPELLAACKIVRQQQGE-- 59
Query: 77 CPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFP 135
CPPG A IT LP S VIH VGPV++ E ++L AY+N L + ANN + IAFP
Sbjct: 60 CPPGHAVITSAGNLPASAVIHAVGPVWHGGDEQEAELLTDAYRNSLLLAAANNYRSIAFP 119
Query: 136 AISCGVSQIMTHA---IKLQTNCGFLESF 161
AIS GV A I ++T FL +
Sbjct: 120 AISTGVYGYPKQAAAEIAVKTVKAFLTRY 148
>gi|313233397|emb|CBY24512.1| unnamed protein product [Oikopleura dioica]
Length = 230
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 75/132 (56%), Gaps = 12/132 (9%)
Query: 11 STKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPE 70
S + ++I +GDI++ +DAIV+ N LL GG AIH AAGP+L K C I
Sbjct: 3 SIASRVRIVQGDITKL----KTDAIVNAANRSLLGGGGVDGAIHRAAGPELFKECRTIK- 57
Query: 71 AQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVG-KANNI 129
C G+A+IT G+ LP + +IHTVGP N + E LR AY+N L++ I
Sbjct: 58 -----GCKTGDAKITHGYNLPATWIIHTVGPNLNAGDDKEK-LRDAYQNSLNLAIDTKEI 111
Query: 130 QYIAFPAISCGV 141
+ IAFP IS G+
Sbjct: 112 KTIAFPCISTGI 123
>gi|345563541|gb|EGX46541.1| hypothetical protein AOL_s00109g113 [Arthrobotrys oligospora ATCC
24927]
Length = 385
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 70/124 (56%), Gaps = 14/124 (11%)
Query: 22 DISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGE 81
D++R VD AIV+ N+ LL GG AIH AAG L C+ + C GE
Sbjct: 55 DMTRMAVD----AIVNAANKSLLGGGGIDGAIHRAAGRGLYDECFDLH------GCETGE 104
Query: 82 ARITPGFKLPVSHVIHTVGPVFNFHC----NPEDILRSAYKNCLSVGKANNIQYIAFPAI 137
A+IT G++LP HVIHTVGP++ H +P + L++ Y N L V + N + +AFP I
Sbjct: 105 AKITKGYRLPAKHVIHTVGPIYWDHKDEGRDPAEFLKNCYVNSLDVARRNGCKSVAFPCI 164
Query: 138 SCGV 141
S G+
Sbjct: 165 STGI 168
>gi|313246956|emb|CBY35802.1| unnamed protein product [Oikopleura dioica]
Length = 230
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 75/132 (56%), Gaps = 12/132 (9%)
Query: 11 STKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPE 70
S + ++I +GDI++ +DAIV+ N LL GG AIH AAGP+L K C I
Sbjct: 3 SIASRVRIVQGDITKL----KTDAIVNAANRSLLGGGGVDGAIHRAAGPELFKECRTIK- 57
Query: 71 AQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVG-KANNI 129
C G+A+IT G+ LP + +IHTVGP N + E LR AY+N L++ I
Sbjct: 58 -----GCKTGDAKITHGYNLPATWIIHTVGPNLNAGDDKEK-LRDAYQNSLNLAIDTKEI 111
Query: 130 QYIAFPAISCGV 141
+ IAFP IS G+
Sbjct: 112 KTIAFPCISTGI 123
>gi|452208797|ref|YP_007488911.1| hypothetical protein MmTuc01_0184 [Methanosarcina mazei Tuc01]
gi|452098699|gb|AGF95639.1| hypothetical protein MmTuc01_0184 [Methanosarcina mazei Tuc01]
Length = 174
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 72/126 (57%), Gaps = 11/126 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++I +GDI + VD AIV+ N LL GG AIH AAGP L + C +
Sbjct: 8 IRIFEGDIVKMRVD----AIVNAANNTLLGGGGVDGAIHRAAGPALLEECKTLN------ 57
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAF 134
CP GEA+IT G+ LP ++IHTVGPV+ ED +L S Y+ L + + I+ IAF
Sbjct: 58 GCPTGEAKITSGYLLPAKYIIHTVGPVWQGGEKGEDELLASCYRKSLELARDYKIKTIAF 117
Query: 135 PAISCG 140
PAIS G
Sbjct: 118 PAISTG 123
>gi|345298749|ref|YP_004828107.1| Appr-1-p processing protein [Enterobacter asburiae LF7a]
gi|345092686|gb|AEN64322.1| Appr-1-p processing domain protein [Enterobacter asburiae LF7a]
Length = 180
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K +++ GDI+ VD IV+ N L+ GG AIH AAGP L +AC + + Q
Sbjct: 2 KPQIEVIHGDITTLHVD----VIVNAANPSLMGGGGVDGAIHRAAGPQLLEACKVVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
CPPG A IT LP VIHTVGPV++ + E IL AY+NCL + N +
Sbjct: 58 GE--CPPGHAVITLAGNLPAKAVIHTVGPVWHGGEHHEARILEDAYRNCLRLAADNGYKT 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 MAFPAISTGV 125
>gi|354722937|ref|ZP_09037152.1| RNase III inhibitor [Enterobacter mori LMG 25706]
Length = 180
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 71/130 (54%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
+ ++I GDI+ VD IV+ N LL GG AIH AAGP L +AC + + Q
Sbjct: 2 RPQIEIIHGDITTLHVD----VIVNAANSSLLGGGGVDGAIHRAAGPQLLEACKAVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
CPPG A IT LP VIH VGPV+ + E IL AY+NCL + N +
Sbjct: 58 G--ECPPGHAVITLAGDLPAKAVIHAVGPVWQGGEHHEARILEDAYRNCLRLAADNGYKT 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 LAFPAISTGV 125
>gi|331672566|ref|ZP_08373355.1| RNase III regulator YmdB [Escherichia coli TA280]
gi|417137388|ref|ZP_11981178.1| macro domain protein [Escherichia coli 97.0259]
gi|417307505|ref|ZP_12094372.1| hypothetical protein PPECC33_9440 [Escherichia coli PCN033]
gi|422970983|ref|ZP_16974495.1| UPF0189 protein ymdB [Escherichia coli TA124]
gi|432542415|ref|ZP_19779271.1| hypothetical protein A197_00996 [Escherichia coli KTE236]
gi|432547885|ref|ZP_19784672.1| hypothetical protein A199_01352 [Escherichia coli KTE237]
gi|432621169|ref|ZP_19857210.1| hypothetical protein A1UO_01041 [Escherichia coli KTE76]
gi|432814679|ref|ZP_20048469.1| hypothetical protein A1Y1_01080 [Escherichia coli KTE115]
gi|331070209|gb|EGI41575.1| RNase III regulator YmdB [Escherichia coli TA280]
gi|338770881|gb|EGP25634.1| hypothetical protein PPECC33_9440 [Escherichia coli PCN033]
gi|371599364|gb|EHN88153.1| UPF0189 protein ymdB [Escherichia coli TA124]
gi|386158952|gb|EIH15285.1| macro domain protein [Escherichia coli 97.0259]
gi|431076669|gb|ELD84164.1| hypothetical protein A197_00996 [Escherichia coli KTE236]
gi|431083821|gb|ELD89993.1| hypothetical protein A199_01352 [Escherichia coli KTE237]
gi|431161635|gb|ELE62106.1| hypothetical protein A1UO_01041 [Escherichia coli KTE76]
gi|431366902|gb|ELG53399.1| hypothetical protein A1Y1_01080 [Escherichia coli KTE115]
Length = 177
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
KT + + +GDI++ VD IV+ N L+ GG AIH AAGP L AC ++ + Q
Sbjct: 2 KTRIHVVQGDITKLAVD----VIVNAANPSLMGGGGVDGAIHRAAGPALLDACLKVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQY 131
CP G A IT LP V+HTVGPV+ ED +L+ AY N L + AN+
Sbjct: 58 G--DCPTGHAVITLAGDLPAKAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVAANSYTS 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 VAFPAISTGV 125
>gi|444352073|ref|YP_007388217.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Enterobacter aerogenes EA1509E]
gi|443902903|emb|CCG30677.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Enterobacter aerogenes EA1509E]
Length = 174
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 79/149 (53%), Gaps = 10/149 (6%)
Query: 17 KISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVR 76
++ GDI+ VD IV+ N LL GG AIH AAGP+L AC + + Q
Sbjct: 6 EVVLGDITTLQVD----VIVNAANPSLLGGGGVDGAIHRAAGPELLAACKIVRQQQGE-- 59
Query: 77 CPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFP 135
CPPG A IT LP S VIH VGPV+ E ++L AY+N L + ANN + IAFP
Sbjct: 60 CPPGHAVITSAGNLPASAVIHAVGPVWRGGDEQEAELLTDAYRNSLLLAAANNYRSIAFP 119
Query: 136 AISCGVSQIMTHA---IKLQTNCGFLESF 161
AIS GV A I ++T FL +
Sbjct: 120 AISTGVYGYPKQAAAEIAVKTVKAFLTRY 148
>gi|70999035|ref|XP_754239.1| LRP16 family protein [Aspergillus fumigatus Af293]
gi|66851876|gb|EAL92201.1| LRP16 family protein [Aspergillus fumigatus Af293]
gi|159127256|gb|EDP52371.1| LRP16 family protein [Aspergillus fumigatus A1163]
Length = 354
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 79/144 (54%), Gaps = 16/144 (11%)
Query: 3 FKVQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQ 62
F + SF+ SL + DI++ + D IV+ NE LL GG AIH AAGPDL
Sbjct: 30 FAKPSNSFNNIISL--IRNDITKL---ENVDCIVNAANESLLGGGGVDGAIHRAAGPDLL 84
Query: 63 KACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHC-----NPEDILRSAY 117
+ C + C G+A+IT ++LP VIHTVGP+++F PE +LRS Y
Sbjct: 85 RECRTL------KGCRTGDAKITSAYELPCKKVIHTVGPIYHFELRKGDDRPEMLLRSCY 138
Query: 118 KNCLSVGKANNIQYIAFPAISCGV 141
+ L + NN++ IAF AIS GV
Sbjct: 139 RRSLELAVENNMKSIAFAAISTGV 162
>gi|78357166|ref|YP_388615.1| Appr-1-p processing protein [Desulfovibrio alaskensis G20]
gi|78219571|gb|ABB38920.1| Appr-1-p processing domain protein [Desulfovibrio alaskensis G20]
Length = 183
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 80/135 (59%), Gaps = 8/135 (5%)
Query: 8 LSFSTKTS-LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACY 66
+ +S+ T L+I +GD++ + +DA+V+ N L GG A+H AAGP L C
Sbjct: 1 MQWSSATGCLEILQGDLTLF----KADAVVNAANSRLAGGGGVDGALHAAAGPALLADCS 56
Query: 67 QIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGK 125
+ + P G+A +TP +LP HVIHTVGPV+ N E+ LR AY++C ++ +
Sbjct: 57 RWVARHGLL--PAGKAMVTPAHRLPARHVIHTVGPVWRGGKNNEETTLRQAYESCFTLCR 114
Query: 126 ANNIQYIAFPAISCG 140
+N ++AFPAISCG
Sbjct: 115 SNGFAHVAFPAISCG 129
>gi|417711473|ref|ZP_12360475.1| macro domain protein [Shigella flexneri K-272]
gi|417715801|ref|ZP_12364734.1| macro domain protein [Shigella flexneri K-227]
gi|333009587|gb|EGK29039.1| macro domain protein [Shigella flexneri K-272]
gi|333020545|gb|EGK39805.1| macro domain protein [Shigella flexneri K-227]
Length = 177
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
KT + + +GDI++ VD IV+ N L+ GG AIH AAGP L AC ++ + Q
Sbjct: 2 KTRIHVVQGDITKLAVD----VIVNAANPSLMGGGGVDGAIHRAAGPALLDACLKVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQY 131
CP G A IT LP V+HTVGPV+ ED +L+ AY N L + AN+
Sbjct: 58 G--DCPTGHAVITLAGDLPAKAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVAANSYTS 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 VAFPAISTGV 125
>gi|15801162|ref|NP_287179.1| hypothetical protein Z1679 [Escherichia coli O157:H7 str. EDL933]
gi|15830677|ref|NP_309450.1| hypothetical protein ECs1423 [Escherichia coli O157:H7 str. Sakai]
gi|16129008|ref|NP_415563.1| O-acetyl-ADP-ribose deacetylase; RNase III inhibitor during cold
shock [Escherichia coli str. K-12 substr. MG1655]
gi|26247182|ref|NP_753222.1| hypothetical protein c1309 [Escherichia coli CFT073]
gi|74311600|ref|YP_310019.1| hypothetical protein SSON_1058 [Shigella sonnei Ss046]
gi|82544488|ref|YP_408435.1| hypothetical protein SBO_2021 [Shigella boydii Sb227]
gi|91210195|ref|YP_540181.1| hypothetical protein UTI89_C1168 [Escherichia coli UTI89]
gi|110641222|ref|YP_668952.1| hypothetical protein ECP_1038 [Escherichia coli 536]
gi|117623234|ref|YP_852147.1| hypothetical protein APECO1_130 [Escherichia coli APEC O1]
gi|157155706|ref|YP_001462277.1| hypothetical protein EcE24377A_1165 [Escherichia coli E24377A]
gi|168747185|ref|ZP_02772207.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC4113]
gi|168754523|ref|ZP_02779530.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC4401]
gi|168760616|ref|ZP_02785623.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC4501]
gi|168767701|ref|ZP_02792708.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC4486]
gi|168773887|ref|ZP_02798894.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC4196]
gi|168783572|ref|ZP_02808579.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC4076]
gi|168789977|ref|ZP_02814984.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC869]
gi|168799321|ref|ZP_02824328.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC508]
gi|170020558|ref|YP_001725512.1| hypothetical protein EcolC_2554 [Escherichia coli ATCC 8739]
gi|170080697|ref|YP_001730017.1| hypothetical protein ECDH10B_1117 [Escherichia coli str. K-12
substr. DH10B]
gi|170681971|ref|YP_001744138.1| hypothetical protein EcSMS35_2086 [Escherichia coli SMS-3-5]
gi|191172390|ref|ZP_03033931.1| appr-1-p processing enzyme domain protein [Escherichia coli F11]
gi|193069434|ref|ZP_03050388.1| appr-1-p processing enzyme domain protein [Escherichia coli
E110019]
gi|194432462|ref|ZP_03064749.1| appr-1-p processing enzyme domain protein [Shigella dysenteriae
1012]
gi|194438062|ref|ZP_03070155.1| appr-1-p processing enzyme domain protein [Escherichia coli 101-1]
gi|195935434|ref|ZP_03080816.1| hypothetical protein EscherichcoliO157_03087 [Escherichia coli
O157:H7 str. EC4024]
gi|208805619|ref|ZP_03247956.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC4206]
gi|208814926|ref|ZP_03256105.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC4045]
gi|208822114|ref|ZP_03262433.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC4042]
gi|209396250|ref|YP_002269893.1| hypothetical protein ECH74115_1425 [Escherichia coli O157:H7 str.
EC4115]
gi|215486255|ref|YP_002328686.1| hypothetical protein E2348C_1136 [Escherichia coli O127:H6 str.
E2348/69]
gi|217328173|ref|ZP_03444255.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. TW14588]
gi|218553623|ref|YP_002386536.1| hypothetical protein ECIAI1_1079 [Escherichia coli IAI1]
gi|218557926|ref|YP_002390839.1| hypothetical protein ECS88_1057 [Escherichia coli S88]
gi|218688998|ref|YP_002397210.1| hypothetical protein ECED1_1189 [Escherichia coli ED1a]
gi|218700452|ref|YP_002408081.1| hypothetical protein ECIAI39_2118 [Escherichia coli IAI39]
gi|222155794|ref|YP_002555933.1| hypothetical protein LF82_3536 [Escherichia coli LF82]
gi|227886599|ref|ZP_04004404.1| appr-1-p processing enzyme domain protein [Escherichia coli 83972]
gi|237706972|ref|ZP_04537453.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|238900300|ref|YP_002926096.1| hypothetical protein BWG_0894 [Escherichia coli BW2952]
gi|251784578|ref|YP_002998882.1| regulator of RNase III activity [Escherichia coli BL21(DE3)]
gi|253773930|ref|YP_003036761.1| hypothetical protein ECBD_2554 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254161152|ref|YP_003044260.1| hypothetical protein ECB_01042 [Escherichia coli B str. REL606]
gi|254287960|ref|YP_003053708.1| hypothetical protein ECD_01042 [Escherichia coli BL21(DE3)]
gi|254792429|ref|YP_003077266.1| hypothetical protein ECSP_1347 [Escherichia coli O157:H7 str.
TW14359]
gi|261227050|ref|ZP_05941331.1| hypothetical protein EscherichiacoliO157_21009 [Escherichia coli
O157:H7 str. FRIK2000]
gi|261256284|ref|ZP_05948817.1| hypothetical protein EscherichiacoliO157EcO_10689 [Escherichia coli
O157:H7 str. FRIK966]
gi|291282065|ref|YP_003498883.1| hypothetical protein G2583_1304 [Escherichia coli O55:H7 str.
CB9615]
gi|293409416|ref|ZP_06652992.1| hypothetical protein ECEG_00351 [Escherichia coli B354]
gi|293414343|ref|ZP_06656992.1| ymdB protein [Escherichia coli B185]
gi|297517432|ref|ZP_06935818.1| hypothetical protein EcolOP_07300 [Escherichia coli OP50]
gi|300928406|ref|ZP_07143939.1| RNase III regulator YmdB [Escherichia coli MS 187-1]
gi|300950137|ref|ZP_07164082.1| RNase III regulator YmdB [Escherichia coli MS 116-1]
gi|300954420|ref|ZP_07166872.1| RNase III regulator YmdB [Escherichia coli MS 175-1]
gi|300974348|ref|ZP_07172560.1| RNase III regulator YmdB [Escherichia coli MS 45-1]
gi|300982653|ref|ZP_07176237.1| RNase III regulator YmdB [Escherichia coli MS 200-1]
gi|301029744|ref|ZP_07192798.1| RNase III regulator YmdB [Escherichia coli MS 196-1]
gi|301051172|ref|ZP_07198002.1| RNase III regulator YmdB [Escherichia coli MS 185-1]
gi|301644951|ref|ZP_07244919.1| RNase III regulator YmdB [Escherichia coli MS 146-1]
gi|306814107|ref|ZP_07448280.1| hypothetical protein ECNC101_18754 [Escherichia coli NC101]
gi|312968885|ref|ZP_07783092.1| macro domain protein [Escherichia coli 2362-75]
gi|331641586|ref|ZP_08342721.1| RNase III regulator YmdB [Escherichia coli H736]
gi|331646300|ref|ZP_08347403.1| RNase III regulator YmdB [Escherichia coli M605]
gi|331652096|ref|ZP_08353115.1| RNase III regulator YmdB [Escherichia coli M718]
gi|331657101|ref|ZP_08358063.1| RNase III regulator YmdB [Escherichia coli TA206]
gi|331682545|ref|ZP_08383164.1| RNase III regulator YmdB [Escherichia coli H299]
gi|383177695|ref|YP_005455700.1| RNase III inhibitor [Shigella sonnei 53G]
gi|386280156|ref|ZP_10057825.1| UPF0189 protein ymdB [Escherichia sp. 4_1_40B]
gi|386596125|ref|YP_006092525.1| Appr-1-p processing protein [Escherichia coli DH1]
gi|386598851|ref|YP_006100357.1| appr-1-p processing enzyme domain-containing protein [Escherichia
coli IHE3034]
gi|386605001|ref|YP_006111301.1| hypothetical protein UM146_12100 [Escherichia coli UM146]
gi|386618617|ref|YP_006138197.1| hypothetical protein ECNA114_1100 [Escherichia coli NA114]
gi|386623498|ref|YP_006143226.1| RNase III inhibitor during cold shock [Escherichia coli O7:K1 str.
CE10]
gi|386628680|ref|YP_006148400.1| hypothetical protein i02_1195 [Escherichia coli str. 'clone D i2']
gi|386633600|ref|YP_006153319.1| hypothetical protein i14_1195 [Escherichia coli str. 'clone D i14']
gi|386638556|ref|YP_006105354.1| putative polyprotein [Escherichia coli ABU 83972]
gi|386705233|ref|YP_006169080.1| hypothetical protein P12B_c2062 [Escherichia coli P12b]
gi|387506175|ref|YP_006158431.1| RNase III inhibitor [Escherichia coli O55:H7 str. RM12579]
gi|387611580|ref|YP_006114696.1| putative DNA and/or RNA unwinding protein [Escherichia coli ETEC
H10407]
gi|387616347|ref|YP_006119369.1| hypothetical protein NRG857_05040 [Escherichia coli O83:H1 str. NRG
857C]
gi|387620755|ref|YP_006128382.1| hypothetical protein ECDH1ME8569_0981 [Escherichia coli DH1]
gi|387828998|ref|YP_003348935.1| hypothetical protein ECSF_0945 [Escherichia coli SE15]
gi|387881928|ref|YP_006312230.1| hypothetical protein CDCO157_1359 [Escherichia coli Xuzhou21]
gi|388477126|ref|YP_489314.1| hypothetical protein Y75_p1016 [Escherichia coli str. K-12 substr.
W3110]
gi|404374366|ref|ZP_10979579.1| UPF0189 protein ymdB [Escherichia sp. 1_1_43]
gi|414576319|ref|ZP_11433506.1| hypothetical protein SS323385_2150 [Shigella sonnei 3233-85]
gi|415774333|ref|ZP_11486796.1| macro domain protein [Escherichia coli 3431]
gi|415809358|ref|ZP_11502128.1| macro domain protein [Escherichia coli LT-68]
gi|415837263|ref|ZP_11519429.1| macro domain protein [Escherichia coli RN587/1]
gi|415850565|ref|ZP_11527440.1| macro domain protein [Shigella sonnei 53G]
gi|416259678|ref|ZP_11640036.1| hypothetical protein SDB_00196 [Shigella dysenteriae CDC 74-1112]
gi|416296236|ref|ZP_11651368.1| hypothetical protein SGF_01790 [Shigella flexneri CDC 796-83]
gi|416310225|ref|ZP_11656328.1| RNase III regulator YmdB [Escherichia coli O157:H7 str. 1044]
gi|416321174|ref|ZP_11663316.1| hypothetical protein ECoD_03627 [Escherichia coli O157:H7 str.
EC1212]
gi|416330805|ref|ZP_11669703.1| hypothetical protein ECF_04686 [Escherichia coli O157:H7 str. 1125]
gi|416334938|ref|ZP_11671649.1| hypothetical protein EcoM_01015 [Escherichia coli WV_060327]
gi|416782205|ref|ZP_11877642.1| RNase III inhibitor [Escherichia coli O157:H7 str. G5101]
gi|416793404|ref|ZP_11882565.1| RNase III inhibitor [Escherichia coli O157:H- str. 493-89]
gi|416804670|ref|ZP_11887425.1| RNase III inhibitor [Escherichia coli O157:H- str. H 2687]
gi|416815792|ref|ZP_11892130.1| RNase III inhibitor [Escherichia coli O55:H7 str. 3256-97]
gi|416825609|ref|ZP_11896718.1| RNase III inhibitor [Escherichia coli O55:H7 str. USDA 5905]
gi|416836371|ref|ZP_11901986.1| RNase III inhibitor [Escherichia coli O157:H7 str. LSU-61]
gi|416897168|ref|ZP_11926938.1| macro domain protein [Escherichia coli STEC_7v]
gi|417083579|ref|ZP_11951624.1| hypothetical protein i01_01351 [Escherichia coli cloneA_i1]
gi|417112776|ref|ZP_11964696.1| macro domain protein [Escherichia coli 1.2741]
gi|417124685|ref|ZP_11973143.1| macro domain protein [Escherichia coli 97.0246]
gi|417130757|ref|ZP_11976028.1| macro domain protein [Escherichia coli 5.0588]
gi|417159012|ref|ZP_11996370.1| macro domain protein [Escherichia coli 99.0741]
gi|417226876|ref|ZP_12029070.1| macro domain protein [Escherichia coli 5.0959]
gi|417255199|ref|ZP_12046915.1| macro domain protein [Escherichia coli 2.3916]
gi|417274759|ref|ZP_12062099.1| macro domain protein [Escherichia coli 2.4168]
gi|417278460|ref|ZP_12065775.1| macro domain protein [Escherichia coli 3.2303]
gi|417283957|ref|ZP_12071254.1| macro domain protein [Escherichia coli 3003]
gi|417290024|ref|ZP_12077307.1| macro domain protein [Escherichia coli B41]
gi|417612267|ref|ZP_12262736.1| macro domain protein [Escherichia coli STEC_EH250]
gi|417617513|ref|ZP_12267941.1| macro domain protein [Escherichia coli G58-1]
gi|417628045|ref|ZP_12278292.1| macro domain protein [Escherichia coli STEC_MHI813]
gi|417633846|ref|ZP_12284062.1| macro domain protein [Escherichia coli STEC_S1191]
gi|417661638|ref|ZP_12311219.1| Macro domain, possibly ADP-ribose binding module [Escherichia coli
AA86]
gi|417672522|ref|ZP_12321989.1| macro domain protein [Shigella dysenteriae 155-74]
gi|417682605|ref|ZP_12331960.1| macro domain protein [Shigella boydii 3594-74]
gi|417706753|ref|ZP_12355803.1| macro domain protein [Shigella flexneri VA-6]
gi|417754967|ref|ZP_12403057.1| regulator of RNase III activity [Escherichia coli DEC2B]
gi|417827164|ref|ZP_12473734.1| regulator of RNase III activity [Shigella flexneri J1713]
gi|417944768|ref|ZP_12588008.1| RNase III inhibitor [Escherichia coli XH140A]
gi|417977203|ref|ZP_12617990.1| RNase III inhibitor [Escherichia coli XH001]
gi|418263571|ref|ZP_12884540.1| regulator of RNase III activity [Shigella sonnei str. Moseley]
gi|418302068|ref|ZP_12913862.1| macro domain protein [Escherichia coli UMNF18]
gi|418996180|ref|ZP_13543786.1| regulator of RNase III activity [Escherichia coli DEC1A]
gi|419001372|ref|ZP_13548920.1| regulator of RNase III activity [Escherichia coli DEC1B]
gi|419006830|ref|ZP_13554282.1| regulator of RNase III activity [Escherichia coli DEC1C]
gi|419017637|ref|ZP_13564955.1| regulator of RNase III activity [Escherichia coli DEC1E]
gi|419023267|ref|ZP_13570505.1| hypothetical protein ECDEC2A_1396 [Escherichia coli DEC2A]
gi|419028127|ref|ZP_13575316.1| regulator of RNase III activity [Escherichia coli DEC2C]
gi|419034016|ref|ZP_13581111.1| regulator of RNase III activity [Escherichia coli DEC2D]
gi|419038881|ref|ZP_13585933.1| regulator of RNase III activity [Escherichia coli DEC2E]
gi|419044620|ref|ZP_13591586.1| regulator of RNase III activity [Escherichia coli DEC3A]
gi|419049781|ref|ZP_13596696.1| regulator of RNase III activity [Escherichia coli DEC3B]
gi|419056261|ref|ZP_13603100.1| regulator of RNase III activity [Escherichia coli DEC3C]
gi|419061677|ref|ZP_13608443.1| regulator of RNase III activity [Escherichia coli DEC3D]
gi|419068351|ref|ZP_13614219.1| regulator of RNase III activity [Escherichia coli DEC3E]
gi|419074546|ref|ZP_13620105.1| regulator of RNase III activity [Escherichia coli DEC3F]
gi|419079697|ref|ZP_13625174.1| regulator of RNase III activity [Escherichia coli DEC4A]
gi|419085370|ref|ZP_13630767.1| regulator of RNase III activity [Escherichia coli DEC4B]
gi|419091318|ref|ZP_13636632.1| regulator of RNase III activity [Escherichia coli DEC4C]
gi|419097478|ref|ZP_13642711.1| regulator of RNase III activity [Escherichia coli DEC4D]
gi|419103151|ref|ZP_13648310.1| regulator of RNase III activity [Escherichia coli DEC4E]
gi|419108550|ref|ZP_13653647.1| regulator of RNase III activity [Escherichia coli DEC4F]
gi|419114004|ref|ZP_13659034.1| regulator of RNase III activity [Escherichia coli DEC5A]
gi|419119647|ref|ZP_13664625.1| regulator of RNase III activity [Escherichia coli DEC5B]
gi|419125253|ref|ZP_13670149.1| regulator of RNase III activity [Escherichia coli DEC5C]
gi|419130888|ref|ZP_13675735.1| regulator of RNase III activity [Escherichia coli DEC5D]
gi|419135690|ref|ZP_13680496.1| hypothetical protein ECDEC5E_1181 [Escherichia coli DEC5E]
gi|419141641|ref|ZP_13686391.1| hypothetical protein ECDEC6A_1283 [Escherichia coli DEC6A]
gi|419147610|ref|ZP_13692293.1| regulator of RNase III activity [Escherichia coli DEC6B]
gi|419153010|ref|ZP_13697592.1| hypothetical protein ECDEC6C_1175 [Escherichia coli DEC6C]
gi|419158394|ref|ZP_13702910.1| hypothetical protein ECDEC6D_1196 [Escherichia coli DEC6D]
gi|419163501|ref|ZP_13707968.1| regulator of RNase III activity [Escherichia coli DEC6E]
gi|419699891|ref|ZP_14227503.1| RNase III inhibitor [Escherichia coli SCI-07]
gi|419810995|ref|ZP_14335873.1| RNase III inhibitor [Escherichia coli O32:H37 str. P4]
gi|419864192|ref|ZP_14386675.1| RNase III inhibitor [Escherichia coli O103:H25 str. CVM9340]
gi|419925537|ref|ZP_14443375.1| hypothetical protein EC54115_20857 [Escherichia coli 541-15]
gi|419928481|ref|ZP_14446193.1| hypothetical protein EC5411_09675 [Escherichia coli 541-1]
gi|419940774|ref|ZP_14457497.1| hypothetical protein EC75_15759 [Escherichia coli 75]
gi|419944992|ref|ZP_14461452.1| hypothetical protein ECHM605_13186 [Escherichia coli HM605]
gi|420268568|ref|ZP_14770964.1| RNase III regulator YmdB [Escherichia coli PA22]
gi|420274533|ref|ZP_14776854.1| RNase III regulator YmdB [Escherichia coli PA40]
gi|420279600|ref|ZP_14781862.1| RNase III regulator YmdB [Escherichia coli TW06591]
gi|420285745|ref|ZP_14787956.1| RNase III regulator YmdB [Escherichia coli TW10246]
gi|420291542|ref|ZP_14793698.1| RNase III regulator YmdB [Escherichia coli TW11039]
gi|420297207|ref|ZP_14799291.1| RNase III regulator YmdB [Escherichia coli TW09109]
gi|420303385|ref|ZP_14805404.1| RNase III regulator YmdB [Escherichia coli TW10119]
gi|420308824|ref|ZP_14810786.1| RNase III regulator YmdB [Escherichia coli EC1738]
gi|420314212|ref|ZP_14816113.1| RNase III regulator YmdB [Escherichia coli EC1734]
gi|420319611|ref|ZP_14821456.1| hypothetical protein SF285071_1233 [Shigella flexneri 2850-71]
gi|420324721|ref|ZP_14826497.1| hypothetical protein SFCCH060_1048 [Shigella flexneri CCH060]
gi|420330467|ref|ZP_14832152.1| hypothetical protein SFK1770_1645 [Shigella flexneri K-1770]
gi|420347495|ref|ZP_14848893.1| hypothetical protein SB96558_2438 [Shigella boydii 965-58]
gi|420353265|ref|ZP_14854384.1| hypothetical protein SB444474_2329 [Shigella boydii 4444-74]
gi|420357837|ref|ZP_14858841.1| hypothetical protein SS322685_1642 [Shigella sonnei 3226-85]
gi|420364435|ref|ZP_14865314.1| regulator of RNase III activity [Shigella sonnei 4822-66]
gi|420381006|ref|ZP_14880461.1| hypothetical protein SD22575_2703 [Shigella dysenteriae 225-75]
gi|421681751|ref|ZP_16121573.1| regulator of RNase III activity [Shigella flexneri 1485-80]
gi|421776372|ref|ZP_16212976.1| hypothetical protein ECAD30_24850 [Escherichia coli AD30]
gi|421811456|ref|ZP_16247239.1| RNase III regulator YmdB [Escherichia coli 8.0416]
gi|421817614|ref|ZP_16253158.1| regulator of RNase III activity [Escherichia coli 10.0821]
gi|421823138|ref|ZP_16258559.1| RNase III regulator YmdB [Escherichia coli FRIK920]
gi|421829896|ref|ZP_16265217.1| RNase III regulator YmdB [Escherichia coli PA7]
gi|422358816|ref|ZP_16439465.1| RNase III regulator YmdB [Escherichia coli MS 110-3]
gi|422366214|ref|ZP_16446689.1| RNase III regulator YmdB [Escherichia coli MS 153-1]
gi|422371540|ref|ZP_16451917.1| RNase III regulator YmdB [Escherichia coli MS 16-3]
gi|422375356|ref|ZP_16455622.1| RNase III regulator YmdB [Escherichia coli MS 60-1]
gi|422380873|ref|ZP_16461046.1| RNase III regulator YmdB [Escherichia coli MS 57-2]
gi|422747924|ref|ZP_16801837.1| macro domain-containing protein [Escherichia coli H252]
gi|422753652|ref|ZP_16807479.1| macro domain-containing protein [Escherichia coli H263]
gi|422765612|ref|ZP_16819339.1| macro domain-containing protein [Escherichia coli E1520]
gi|422770276|ref|ZP_16823967.1| macro domain-containing protein [Escherichia coli E482]
gi|422782129|ref|ZP_16834914.1| macro domain-containing protein [Escherichia coli TW10509]
gi|422785631|ref|ZP_16838370.1| macro domain-containing protein [Escherichia coli H489]
gi|422790257|ref|ZP_16842962.1| macro domain-containing protein [Escherichia coli TA007]
gi|422800463|ref|ZP_16848961.1| macro domain-containing protein [Escherichia coli M863]
gi|422817682|ref|ZP_16865896.1| UPF0189 protein ymdB [Escherichia coli M919]
gi|422828699|ref|ZP_16876869.1| hypothetical protein ESNG_01374 [Escherichia coli B093]
gi|422833263|ref|ZP_16881330.1| hypothetical protein ESOG_00931 [Escherichia coli E101]
gi|422839506|ref|ZP_16887478.1| hypothetical protein ESPG_02164 [Escherichia coli H397]
gi|423684587|ref|ZP_17659421.1| RNase III regulator YmdB [Escherichia coli PA31]
gi|423701890|ref|ZP_17676349.1| UPF0189 protein ymdB [Escherichia coli H730]
gi|424076338|ref|ZP_17813595.1| RNase III regulator YmdB [Escherichia coli FDA505]
gi|424082691|ref|ZP_17819464.1| RNase III regulator YmdB [Escherichia coli FDA517]
gi|424089183|ref|ZP_17825379.1| RNase III regulator YmdB [Escherichia coli FRIK1996]
gi|424095574|ref|ZP_17831226.1| RNase III regulator YmdB [Escherichia coli FRIK1985]
gi|424101956|ref|ZP_17837025.1| RNase III regulator YmdB [Escherichia coli FRIK1990]
gi|424108746|ref|ZP_17843236.1| RNase III regulator YmdB [Escherichia coli 93-001]
gi|424114595|ref|ZP_17848665.1| RNase III regulator YmdB [Escherichia coli PA3]
gi|424120775|ref|ZP_17854389.1| RNase III regulator YmdB [Escherichia coli PA5]
gi|424126979|ref|ZP_17860111.1| RNase III regulator YmdB [Escherichia coli PA9]
gi|424133126|ref|ZP_17865847.1| RNase III regulator YmdB [Escherichia coli PA10]
gi|424139716|ref|ZP_17871897.1| RNase III regulator YmdB [Escherichia coli PA14]
gi|424146166|ref|ZP_17877815.1| RNase III regulator YmdB [Escherichia coli PA15]
gi|424152242|ref|ZP_17883401.1| RNase III regulator YmdB [Escherichia coli PA24]
gi|424205973|ref|ZP_17888841.1| RNase III regulator YmdB [Escherichia coli PA25]
gi|424282254|ref|ZP_17894724.1| RNase III regulator YmdB [Escherichia coli PA28]
gi|424432490|ref|ZP_17900489.1| RNase III regulator YmdB [Escherichia coli PA32]
gi|424454663|ref|ZP_17906101.1| RNase III regulator YmdB [Escherichia coli PA33]
gi|424460999|ref|ZP_17911798.1| RNase III regulator YmdB [Escherichia coli PA39]
gi|424467453|ref|ZP_17917553.1| RNase III regulator YmdB [Escherichia coli PA41]
gi|424474005|ref|ZP_17923591.1| RNase III regulator YmdB [Escherichia coli PA42]
gi|424479904|ref|ZP_17929074.1| RNase III regulator YmdB [Escherichia coli TW07945]
gi|424485985|ref|ZP_17934767.1| RNase III regulator YmdB [Escherichia coli TW09098]
gi|424492219|ref|ZP_17940427.1| RNase III regulator YmdB [Escherichia coli TW09195]
gi|424499208|ref|ZP_17946397.1| RNase III regulator YmdB [Escherichia coli EC4203]
gi|424505347|ref|ZP_17952044.1| RNase III regulator YmdB [Escherichia coli EC4196]
gi|424511726|ref|ZP_17957833.1| RNase III regulator YmdB [Escherichia coli TW14313]
gi|424519210|ref|ZP_17963560.1| RNase III regulator YmdB [Escherichia coli TW14301]
gi|424525096|ref|ZP_17969044.1| RNase III regulator YmdB [Escherichia coli EC4421]
gi|424531286|ref|ZP_17974844.1| RNase III regulator YmdB [Escherichia coli EC4422]
gi|424537254|ref|ZP_17980432.1| RNase III regulator YmdB [Escherichia coli EC4013]
gi|424543201|ref|ZP_17985911.1| RNase III regulator YmdB [Escherichia coli EC4402]
gi|424549518|ref|ZP_17991627.1| RNase III regulator YmdB [Escherichia coli EC4439]
gi|424555750|ref|ZP_17997387.1| RNase III regulator YmdB [Escherichia coli EC4436]
gi|424562099|ref|ZP_18003311.1| RNase III regulator YmdB [Escherichia coli EC4437]
gi|424568161|ref|ZP_18008984.1| RNase III regulator YmdB [Escherichia coli EC4448]
gi|424574318|ref|ZP_18014656.1| RNase III regulator YmdB [Escherichia coli EC1845]
gi|424580229|ref|ZP_18020092.1| RNase III regulator YmdB [Escherichia coli EC1863]
gi|425096920|ref|ZP_18499883.1| regulator of RNase III activity [Escherichia coli 3.4870]
gi|425103151|ref|ZP_18505687.1| regulator of RNase III activity [Escherichia coli 5.2239]
gi|425108939|ref|ZP_18511116.1| RNase III regulator YmdB [Escherichia coli 6.0172]
gi|425114409|ref|ZP_18516227.1| RNase III regulator YmdB [Escherichia coli 8.0566]
gi|425119121|ref|ZP_18520837.1| regulator of RNase III activity [Escherichia coli 8.0569]
gi|425124679|ref|ZP_18526166.1| regulator of RNase III activity [Escherichia coli 8.0586]
gi|425130737|ref|ZP_18531764.1| regulator of RNase III activity [Escherichia coli 8.2524]
gi|425137103|ref|ZP_18537755.1| RNase III regulator YmdB [Escherichia coli 10.0833]
gi|425142928|ref|ZP_18543158.1| regulator of RNase III activity [Escherichia coli 10.0869]
gi|425149181|ref|ZP_18548996.1| regulator of RNase III activity [Escherichia coli 88.0221]
gi|425154903|ref|ZP_18554380.1| RNase III regulator YmdB [Escherichia coli PA34]
gi|425161362|ref|ZP_18560467.1| RNase III regulator YmdB [Escherichia coli FDA506]
gi|425166922|ref|ZP_18565659.1| RNase III regulator YmdB [Escherichia coli FDA507]
gi|425173168|ref|ZP_18571492.1| RNase III regulator YmdB [Escherichia coli FDA504]
gi|425179040|ref|ZP_18577023.1| RNase III regulator YmdB [Escherichia coli FRIK1999]
gi|425185279|ref|ZP_18582809.1| RNase III regulator YmdB [Escherichia coli FRIK1997]
gi|425192036|ref|ZP_18589086.1| RNase III regulator YmdB [Escherichia coli NE1487]
gi|425198387|ref|ZP_18594937.1| RNase III regulator YmdB [Escherichia coli NE037]
gi|425204978|ref|ZP_18601030.1| RNase III regulator YmdB [Escherichia coli FRIK2001]
gi|425210707|ref|ZP_18606365.1| RNase III regulator YmdB [Escherichia coli PA4]
gi|425216774|ref|ZP_18612008.1| RNase III regulator YmdB [Escherichia coli PA23]
gi|425223353|ref|ZP_18618117.1| RNase III regulator YmdB [Escherichia coli PA49]
gi|425229562|ref|ZP_18623883.1| RNase III regulator YmdB [Escherichia coli PA45]
gi|425235856|ref|ZP_18629748.1| RNase III regulator YmdB [Escherichia coli TT12B]
gi|425241860|ref|ZP_18635415.1| RNase III regulator YmdB [Escherichia coli MA6]
gi|425247952|ref|ZP_18641077.1| RNase III regulator YmdB [Escherichia coli 5905]
gi|425253729|ref|ZP_18646518.1| RNase III regulator YmdB [Escherichia coli CB7326]
gi|425259944|ref|ZP_18652248.1| RNase III regulator YmdB [Escherichia coli EC96038]
gi|425266047|ref|ZP_18657903.1| RNase III regulator YmdB [Escherichia coli 5412]
gi|425272043|ref|ZP_18663513.1| RNase III regulator YmdB [Escherichia coli TW15901]
gi|425277176|ref|ZP_18668477.1| RNase III regulator YmdB [Escherichia coli ARS4.2123]
gi|425282550|ref|ZP_18673638.1| RNase III regulator YmdB [Escherichia coli TW00353]
gi|425293619|ref|ZP_18684086.1| RNase III regulator YmdB [Escherichia coli PA38]
gi|425304574|ref|ZP_18694336.1| RNase III regulator YmdB [Escherichia coli N1]
gi|425310274|ref|ZP_18699669.1| RNase III regulator YmdB [Escherichia coli EC1735]
gi|425316207|ref|ZP_18705202.1| RNase III regulator YmdB [Escherichia coli EC1736]
gi|425322300|ref|ZP_18710884.1| RNase III regulator YmdB [Escherichia coli EC1737]
gi|425328498|ref|ZP_18716631.1| RNase III regulator YmdB [Escherichia coli EC1846]
gi|425334695|ref|ZP_18722327.1| RNase III regulator YmdB [Escherichia coli EC1847]
gi|425341090|ref|ZP_18728233.1| RNase III regulator YmdB [Escherichia coli EC1848]
gi|425346947|ref|ZP_18733671.1| RNase III regulator YmdB [Escherichia coli EC1849]
gi|425353194|ref|ZP_18739490.1| RNase III regulator YmdB [Escherichia coli EC1850]
gi|425359180|ref|ZP_18745066.1| RNase III regulator YmdB [Escherichia coli EC1856]
gi|425365312|ref|ZP_18750753.1| RNase III regulator YmdB [Escherichia coli EC1862]
gi|425371722|ref|ZP_18756603.1| RNase III regulator YmdB [Escherichia coli EC1864]
gi|425384528|ref|ZP_18768323.1| RNase III regulator YmdB [Escherichia coli EC1866]
gi|425391226|ref|ZP_18774599.1| RNase III regulator YmdB [Escherichia coli EC1868]
gi|425397337|ref|ZP_18780294.1| RNase III regulator YmdB [Escherichia coli EC1869]
gi|425403307|ref|ZP_18785834.1| RNase III regulator YmdB [Escherichia coli EC1870]
gi|425409856|ref|ZP_18791924.1| RNase III regulator YmdB [Escherichia coli NE098]
gi|425416189|ref|ZP_18797730.1| RNase III regulator YmdB [Escherichia coli FRIK523]
gi|425427301|ref|ZP_18808261.1| RNase III regulator YmdB [Escherichia coli 0.1304]
gi|428945984|ref|ZP_19018509.1| regulator of RNase III activity [Escherichia coli 88.1467]
gi|428952111|ref|ZP_19024146.1| regulator of RNase III activity [Escherichia coli 88.1042]
gi|428958002|ref|ZP_19029592.1| regulator of RNase III activity [Escherichia coli 89.0511]
gi|428964356|ref|ZP_19035441.1| regulator of RNase III activity [Escherichia coli 90.0091]
gi|428970479|ref|ZP_19041041.1| regulator of RNase III activity [Escherichia coli 90.0039]
gi|428976996|ref|ZP_19047074.1| regulator of RNase III activity [Escherichia coli 90.2281]
gi|428982738|ref|ZP_19052381.1| regulator of RNase III activity [Escherichia coli 93.0055]
gi|428988910|ref|ZP_19058105.1| regulator of RNase III activity [Escherichia coli 93.0056]
gi|428994754|ref|ZP_19063568.1| regulator of RNase III activity [Escherichia coli 94.0618]
gi|429000816|ref|ZP_19069239.1| regulator of RNase III activity [Escherichia coli 95.0183]
gi|429006998|ref|ZP_19074802.1| regulator of RNase III activity [Escherichia coli 95.1288]
gi|429013463|ref|ZP_19080609.1| regulator of RNase III activity [Escherichia coli 95.0943]
gi|429019639|ref|ZP_19086338.1| regulator of RNase III activity [Escherichia coli 96.0428]
gi|429025282|ref|ZP_19091597.1| regulator of RNase III activity [Escherichia coli 96.0427]
gi|429031491|ref|ZP_19097278.1| regulator of RNase III activity [Escherichia coli 96.0939]
gi|429037649|ref|ZP_19103007.1| regulator of RNase III activity [Escherichia coli 96.0932]
gi|429043791|ref|ZP_19108705.1| regulator of RNase III activity [Escherichia coli 96.0107]
gi|429049378|ref|ZP_19114018.1| regulator of RNase III activity [Escherichia coli 97.0003]
gi|429054704|ref|ZP_19119153.1| regulator of RNase III activity [Escherichia coli 97.1742]
gi|429060421|ref|ZP_19124527.1| regulator of RNase III activity [Escherichia coli 97.0007]
gi|429066040|ref|ZP_19129804.1| regulator of RNase III activity [Escherichia coli 99.0672]
gi|429072415|ref|ZP_19135743.1| RNase III regulator YmdB [Escherichia coli 99.0678]
gi|429077787|ref|ZP_19140981.1| regulator of RNase III activity [Escherichia coli 99.0713]
gi|429825167|ref|ZP_19356545.1| regulator of RNase III activity [Escherichia coli 96.0109]
gi|429831508|ref|ZP_19362215.1| regulator of RNase III activity [Escherichia coli 97.0010]
gi|432357360|ref|ZP_19600603.1| hypothetical protein WCC_01319 [Escherichia coli KTE4]
gi|432380755|ref|ZP_19623704.1| hypothetical protein WCU_00897 [Escherichia coli KTE15]
gi|432386520|ref|ZP_19629415.1| hypothetical protein WCY_01770 [Escherichia coli KTE16]
gi|432391066|ref|ZP_19633924.1| hypothetical protein WE9_01391 [Escherichia coli KTE21]
gi|432396901|ref|ZP_19639686.1| hypothetical protein WEI_01820 [Escherichia coli KTE25]
gi|432405834|ref|ZP_19648554.1| hypothetical protein WEO_01022 [Escherichia coli KTE28]
gi|432411135|ref|ZP_19653813.1| hypothetical protein WG9_01620 [Escherichia coli KTE39]
gi|432416092|ref|ZP_19658714.1| hypothetical protein WGI_01602 [Escherichia coli KTE44]
gi|432421138|ref|ZP_19663693.1| hypothetical protein A137_01558 [Escherichia coli KTE178]
gi|432431179|ref|ZP_19673620.1| hypothetical protein A13K_01470 [Escherichia coli KTE187]
gi|432435711|ref|ZP_19678105.1| hypothetical protein A13M_01417 [Escherichia coli KTE188]
gi|432440509|ref|ZP_19682858.1| hypothetical protein A13O_01335 [Escherichia coli KTE189]
gi|432445626|ref|ZP_19687929.1| hypothetical protein A13S_01662 [Escherichia coli KTE191]
gi|432449262|ref|ZP_19691543.1| hypothetical protein A13W_00215 [Escherichia coli KTE193]
gi|432456000|ref|ZP_19698195.1| hypothetical protein A15C_01789 [Escherichia coli KTE201]
gi|432464984|ref|ZP_19707088.1| hypothetical protein A15K_00928 [Escherichia coli KTE205]
gi|432470384|ref|ZP_19712436.1| hypothetical protein A15M_01268 [Escherichia coli KTE206]
gi|432484733|ref|ZP_19726652.1| hypothetical protein A15Y_01211 [Escherichia coli KTE212]
gi|432494934|ref|ZP_19736749.1| hypothetical protein A173_02102 [Escherichia coli KTE214]
gi|432499283|ref|ZP_19741055.1| hypothetical protein A177_01379 [Escherichia coli KTE216]
gi|432503772|ref|ZP_19745505.1| hypothetical protein A17E_00826 [Escherichia coli KTE220]
gi|432513323|ref|ZP_19750556.1| hypothetical protein A17M_01179 [Escherichia coli KTE224]
gi|432523186|ref|ZP_19760321.1| hypothetical protein A17Y_01299 [Escherichia coli KTE230]
gi|432553084|ref|ZP_19789813.1| hypothetical protein A1S3_01476 [Escherichia coli KTE47]
gi|432558103|ref|ZP_19794791.1| hypothetical protein A1S7_01755 [Escherichia coli KTE49]
gi|432563108|ref|ZP_19799726.1| hypothetical protein A1SA_01768 [Escherichia coli KTE51]
gi|432568035|ref|ZP_19804556.1| hypothetical protein A1SE_01613 [Escherichia coli KTE53]
gi|432573066|ref|ZP_19809556.1| hypothetical protein A1SI_01761 [Escherichia coli KTE55]
gi|432579747|ref|ZP_19816177.1| hypothetical protein A1SK_03519 [Escherichia coli KTE56]
gi|432587293|ref|ZP_19823659.1| hypothetical protein A1SO_01648 [Escherichia coli KTE58]
gi|432592184|ref|ZP_19828511.1| hypothetical protein A1SS_01609 [Escherichia coli KTE60]
gi|432596906|ref|ZP_19833187.1| hypothetical protein A1SW_01617 [Escherichia coli KTE62]
gi|432601572|ref|ZP_19837819.1| hypothetical protein A1U5_01407 [Escherichia coli KTE66]
gi|432606895|ref|ZP_19843086.1| hypothetical protein A1U7_01893 [Escherichia coli KTE67]
gi|432610811|ref|ZP_19846978.1| hypothetical protein A1UG_01165 [Escherichia coli KTE72]
gi|432615967|ref|ZP_19852091.1| hypothetical protein A1UM_01399 [Escherichia coli KTE75]
gi|432626644|ref|ZP_19862625.1| hypothetical protein A1UQ_01480 [Escherichia coli KTE77]
gi|432636312|ref|ZP_19872194.1| hypothetical protein A1UY_01669 [Escherichia coli KTE81]
gi|432645568|ref|ZP_19881366.1| hypothetical protein A1W5_01318 [Escherichia coli KTE86]
gi|432650483|ref|ZP_19886242.1| hypothetical protein A1W7_01484 [Escherichia coli KTE87]
gi|432654668|ref|ZP_19890384.1| hypothetical protein A1WE_00775 [Escherichia coli KTE93]
gi|432660267|ref|ZP_19895917.1| hypothetical protein A1WY_01681 [Escherichia coli KTE111]
gi|432669984|ref|ZP_19905524.1| hypothetical protein A1Y7_01524 [Escherichia coli KTE119]
gi|432674048|ref|ZP_19909533.1| hypothetical protein A1YU_00601 [Escherichia coli KTE142]
gi|432684877|ref|ZP_19920185.1| hypothetical protein A31A_01729 [Escherichia coli KTE156]
gi|432690967|ref|ZP_19926205.1| hypothetical protein A31G_03186 [Escherichia coli KTE161]
gi|432693770|ref|ZP_19928980.1| hypothetical protein A31I_01239 [Escherichia coli KTE162]
gi|432698437|ref|ZP_19933602.1| hypothetical protein A31M_01184 [Escherichia coli KTE169]
gi|432703661|ref|ZP_19938778.1| hypothetical protein A31Q_01538 [Escherichia coli KTE171]
gi|432709945|ref|ZP_19945009.1| hypothetical protein WCG_03270 [Escherichia coli KTE6]
gi|432712674|ref|ZP_19947723.1| hypothetical protein WCI_01043 [Escherichia coli KTE8]
gi|432718079|ref|ZP_19953063.1| hypothetical protein WCK_01702 [Escherichia coli KTE9]
gi|432722528|ref|ZP_19957451.1| hypothetical protein WE1_01556 [Escherichia coli KTE17]
gi|432727116|ref|ZP_19961997.1| hypothetical protein WE3_01558 [Escherichia coli KTE18]
gi|432731800|ref|ZP_19966635.1| hypothetical protein WGK_01640 [Escherichia coli KTE45]
gi|432736542|ref|ZP_19971312.1| hypothetical protein WGE_01787 [Escherichia coli KTE42]
gi|432740802|ref|ZP_19975523.1| hypothetical protein WEE_01481 [Escherichia coli KTE23]
gi|432745058|ref|ZP_19979753.1| hypothetical protein WGG_01181 [Escherichia coli KTE43]
gi|432753789|ref|ZP_19988345.1| hypothetical protein WEA_00762 [Escherichia coli KTE22]
gi|432758878|ref|ZP_19993377.1| hypothetical protein A1S1_00997 [Escherichia coli KTE46]
gi|432769868|ref|ZP_20004220.1| hypothetical protein A1S9_02669 [Escherichia coli KTE50]
gi|432777920|ref|ZP_20012169.1| hypothetical protein A1SQ_01585 [Escherichia coli KTE59]
gi|432782905|ref|ZP_20017089.1| hypothetical protein A1SY_01740 [Escherichia coli KTE63]
gi|432786708|ref|ZP_20020872.1| hypothetical protein A1U3_00844 [Escherichia coli KTE65]
gi|432792314|ref|ZP_20026402.1| hypothetical protein A1US_01527 [Escherichia coli KTE78]
gi|432798275|ref|ZP_20032299.1| hypothetical protein A1UU_03013 [Escherichia coli KTE79]
gi|432801348|ref|ZP_20035330.1| hypothetical protein A1W3_01601 [Escherichia coli KTE84]
gi|432820294|ref|ZP_20053997.1| hypothetical protein A1Y5_01894 [Escherichia coli KTE118]
gi|432826515|ref|ZP_20060169.1| hypothetical protein A1YA_03228 [Escherichia coli KTE123]
gi|432843583|ref|ZP_20076766.1| hypothetical protein A1YS_01501 [Escherichia coli KTE141]
gi|432849497|ref|ZP_20080719.1| hypothetical protein A1YY_00844 [Escherichia coli KTE144]
gi|432874204|ref|ZP_20093341.1| hypothetical protein A313_04229 [Escherichia coli KTE147]
gi|432880768|ref|ZP_20097303.1| hypothetical protein A317_03585 [Escherichia coli KTE154]
gi|432893754|ref|ZP_20105766.1| hypothetical protein A31K_02903 [Escherichia coli KTE165]
gi|432897944|ref|ZP_20108775.1| hypothetical protein A13U_01529 [Escherichia coli KTE192]
gi|432903915|ref|ZP_20113186.1| hypothetical protein A13Y_01550 [Escherichia coli KTE194]
gi|432918240|ref|ZP_20122645.1| hypothetical protein A133_01554 [Escherichia coli KTE173]
gi|432925530|ref|ZP_20127559.1| hypothetical protein A135_01602 [Escherichia coli KTE175]
gi|432936954|ref|ZP_20135646.1| hypothetical protein A13C_00062 [Escherichia coli KTE183]
gi|432946340|ref|ZP_20141969.1| hypothetical protein A153_01719 [Escherichia coli KTE196]
gi|432954338|ref|ZP_20146457.1| hypothetical protein A155_01732 [Escherichia coli KTE197]
gi|432960596|ref|ZP_20150716.1| hypothetical protein A15E_01629 [Escherichia coli KTE202]
gi|432971242|ref|ZP_20160115.1| hypothetical protein A15O_01812 [Escherichia coli KTE207]
gi|432977677|ref|ZP_20166500.1| hypothetical protein A15S_03591 [Escherichia coli KTE209]
gi|432980490|ref|ZP_20169268.1| hypothetical protein A15W_01614 [Escherichia coli KTE211]
gi|432984775|ref|ZP_20173504.1| hypothetical protein A175_01225 [Escherichia coli KTE215]
gi|432990115|ref|ZP_20178781.1| hypothetical protein A179_01887 [Escherichia coli KTE217]
gi|432994749|ref|ZP_20183363.1| hypothetical protein A17A_01833 [Escherichia coli KTE218]
gi|432999276|ref|ZP_20187812.1| hypothetical protein A17K_01614 [Escherichia coli KTE223]
gi|433004491|ref|ZP_20192929.1| hypothetical protein A17S_02058 [Escherichia coli KTE227]
gi|433011748|ref|ZP_20200151.1| hypothetical protein A17W_04515 [Escherichia coli KTE229]
gi|433013248|ref|ZP_20201620.1| hypothetical protein WI5_01079 [Escherichia coli KTE104]
gi|433022889|ref|ZP_20210899.1| hypothetical protein WI9_01060 [Escherichia coli KTE106]
gi|433028044|ref|ZP_20215911.1| hypothetical protein WIA_01138 [Escherichia coli KTE109]
gi|433032577|ref|ZP_20220346.1| hypothetical protein WIC_01183 [Escherichia coli KTE112]
gi|433038079|ref|ZP_20225689.1| hypothetical protein WIE_01425 [Escherichia coli KTE113]
gi|433042545|ref|ZP_20230064.1| hypothetical protein WIG_01085 [Escherichia coli KTE117]
gi|433047183|ref|ZP_20234588.1| hypothetical protein WII_01154 [Escherichia coli KTE120]
gi|433057323|ref|ZP_20244403.1| hypothetical protein WIM_01109 [Escherichia coli KTE124]
gi|433062268|ref|ZP_20249221.1| hypothetical protein WIO_01101 [Escherichia coli KTE125]
gi|433072071|ref|ZP_20258762.1| hypothetical protein WIS_01048 [Escherichia coli KTE129]
gi|433077177|ref|ZP_20263737.1| hypothetical protein WIU_01054 [Escherichia coli KTE131]
gi|433081962|ref|ZP_20268434.1| hypothetical protein WIW_01107 [Escherichia coli KTE133]
gi|433086631|ref|ZP_20273023.1| hypothetical protein WIY_01083 [Escherichia coli KTE137]
gi|433095915|ref|ZP_20282124.1| hypothetical protein WK3_01125 [Escherichia coli KTE139]
gi|433100551|ref|ZP_20286656.1| hypothetical protein WK5_01109 [Escherichia coli KTE145]
gi|433105137|ref|ZP_20291151.1| hypothetical protein WK7_01018 [Escherichia coli KTE148]
gi|433110341|ref|ZP_20296212.1| hypothetical protein WK9_01206 [Escherichia coli KTE150]
gi|433114906|ref|ZP_20300717.1| hypothetical protein WKA_01098 [Escherichia coli KTE153]
gi|433119588|ref|ZP_20305290.1| hypothetical protein WKC_01031 [Escherichia coli KTE157]
gi|433124578|ref|ZP_20310161.1| hypothetical protein WKE_01079 [Escherichia coli KTE160]
gi|433138638|ref|ZP_20323918.1| hypothetical protein WKM_00925 [Escherichia coli KTE167]
gi|433143661|ref|ZP_20328823.1| hypothetical protein WKO_01200 [Escherichia coli KTE168]
gi|433148533|ref|ZP_20333582.1| hypothetical protein WKQ_01194 [Escherichia coli KTE174]
gi|433153120|ref|ZP_20338084.1| hypothetical protein WKS_01051 [Escherichia coli KTE176]
gi|433162866|ref|ZP_20347623.1| hypothetical protein WKW_01077 [Escherichia coli KTE179]
gi|433167893|ref|ZP_20352556.1| hypothetical protein WKY_01153 [Escherichia coli KTE180]
gi|433172870|ref|ZP_20357420.1| hypothetical protein WGQ_01143 [Escherichia coli KTE232]
gi|433182558|ref|ZP_20366850.1| hypothetical protein WGO_01018 [Escherichia coli KTE85]
gi|433187826|ref|ZP_20371941.1| hypothetical protein WGS_00905 [Escherichia coli KTE88]
gi|433197644|ref|ZP_20381562.1| hypothetical protein WGW_01190 [Escherichia coli KTE94]
gi|433207146|ref|ZP_20390839.1| hypothetical protein WI1_00918 [Escherichia coli KTE97]
gi|433211900|ref|ZP_20395509.1| hypothetical protein WI3_01081 [Escherichia coli KTE99]
gi|433322827|ref|ZP_20400230.1| hypothetical protein B185_005340 [Escherichia coli J96]
gi|442590785|ref|ZP_21009544.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Escherichia coli O10:K5(L):H4 str. ATCC 23506]
gi|442600019|ref|ZP_21017721.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Escherichia coli O5:K4(L):H4 str. ATCC 23502]
gi|442603934|ref|ZP_21018788.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Escherichia coli Nissle 1917]
gi|444923814|ref|ZP_21243398.1| regulator of RNase III activity [Escherichia coli 09BKT078844]
gi|444930017|ref|ZP_21249136.1| regulator of RNase III activity [Escherichia coli 99.0814]
gi|444935234|ref|ZP_21254128.1| regulator of RNase III activity [Escherichia coli 99.0815]
gi|444940877|ref|ZP_21259492.1| regulator of RNase III activity [Escherichia coli 99.0816]
gi|444946538|ref|ZP_21264928.1| regulator of RNase III activity [Escherichia coli 99.0839]
gi|444952077|ref|ZP_21270262.1| regulator of RNase III activity [Escherichia coli 99.0848]
gi|444957536|ref|ZP_21275489.1| regulator of RNase III activity [Escherichia coli 99.1753]
gi|444962812|ref|ZP_21280521.1| regulator of RNase III activity [Escherichia coli 99.1775]
gi|444968506|ref|ZP_21285956.1| regulator of RNase III activity [Escherichia coli 99.1793]
gi|444973971|ref|ZP_21291210.1| regulator of RNase III activity [Escherichia coli 99.1805]
gi|444979194|ref|ZP_21296179.1| regulator of RNase III activity [Escherichia coli ATCC 700728]
gi|444984843|ref|ZP_21301687.1| regulator of RNase III activity [Escherichia coli PA11]
gi|444990090|ref|ZP_21306807.1| regulator of RNase III activity [Escherichia coli PA19]
gi|444995301|ref|ZP_21311877.1| regulator of RNase III activity [Escherichia coli PA13]
gi|445000990|ref|ZP_21317430.1| regulator of RNase III activity [Escherichia coli PA2]
gi|445006409|ref|ZP_21322723.1| regulator of RNase III activity [Escherichia coli PA47]
gi|445011505|ref|ZP_21327675.1| regulator of RNase III activity [Escherichia coli PA48]
gi|445017257|ref|ZP_21333286.1| regulator of RNase III activity [Escherichia coli PA8]
gi|445022807|ref|ZP_21338705.1| regulator of RNase III activity [Escherichia coli 7.1982]
gi|445027984|ref|ZP_21343737.1| regulator of RNase III activity [Escherichia coli 99.1781]
gi|445033566|ref|ZP_21349163.1| regulator of RNase III activity [Escherichia coli 99.1762]
gi|445039246|ref|ZP_21354689.1| regulator of RNase III activity [Escherichia coli PA35]
gi|445044528|ref|ZP_21359843.1| regulator of RNase III activity [Escherichia coli 3.4880]
gi|445050075|ref|ZP_21365210.1| regulator of RNase III activity [Escherichia coli 95.0083]
gi|445055755|ref|ZP_21370681.1| regulator of RNase III activity [Escherichia coli 99.0670]
gi|450187502|ref|ZP_21889852.1| hypothetical protein A364_06055 [Escherichia coli SEPT362]
gi|450241573|ref|ZP_21899625.1| hypothetical protein C201_04661 [Escherichia coli S17]
gi|452971550|ref|ZP_21969777.1| RNase III inhibitor [Escherichia coli O157:H7 str. EC4009]
gi|67476551|sp|P0A8D6.1|YMDB_ECOLI RecName: Full=O-acetyl-ADP-ribose deacetylase; AltName:
Full=Regulator of RNase III activity
gi|67476554|sp|P0A8D7.1|YMDB_ECOL6 RecName: Full=O-acetyl-ADP-ribose deacetylase; AltName:
Full=Regulator of RNase III activity
gi|67476557|sp|P0A8D8.1|YMDB_ECO57 RecName: Full=O-acetyl-ADP-ribose deacetylase; AltName:
Full=Regulator of RNase III activity
gi|12514577|gb|AAG55791.1|AE005315_5 putative polyprotein [Escherichia coli O157:H7 str. EDL933]
gi|26107583|gb|AAN79782.1|AE016759_56 Hypothetical protein ymdB [Escherichia coli CFT073]
gi|1787283|gb|AAC74129.1| O-acetyl-ADP-ribose deacetylase; RNase III inhibitor during cold
shock; putative cardiolipin synthase C regulatory
subunit [Escherichia coli str. K-12 substr. MG1655]
gi|4062616|dbj|BAA35835.1| conserved hypothetical protein [Escherichia coli str. K12 substr.
W3110]
gi|13360887|dbj|BAB34846.1| putative polyprotein [Escherichia coli O157:H7 str. Sakai]
gi|73855077|gb|AAZ87784.1| putative polyprotein [Shigella sonnei Ss046]
gi|81245899|gb|ABB66607.1| putative polyprotein [Shigella boydii Sb227]
gi|91071769|gb|ABE06650.1| hypothetical protein YmdB [Escherichia coli UTI89]
gi|110342814|gb|ABG69051.1| hypothetical protein YmdB [Escherichia coli 536]
gi|115512358|gb|ABJ00433.1| conserved hypothetical protein [Escherichia coli APEC O1]
gi|157077736|gb|ABV17444.1| appr-1-p processing enzyme domain protein [Escherichia coli
E24377A]
gi|169755486|gb|ACA78185.1| Appr-1-p processing domain protein [Escherichia coli ATCC 8739]
gi|169888532|gb|ACB02239.1| conserved protein [Escherichia coli str. K-12 substr. DH10B]
gi|170519689|gb|ACB17867.1| appr-1-p processing enzyme domain protein [Escherichia coli
SMS-3-5]
gi|187770456|gb|EDU34300.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC4196]
gi|188018211|gb|EDU56333.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC4113]
gi|188999104|gb|EDU68090.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC4076]
gi|189358237|gb|EDU76656.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC4401]
gi|189363116|gb|EDU81535.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC4486]
gi|189368687|gb|EDU87103.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC4501]
gi|189370489|gb|EDU88905.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC869]
gi|189378270|gb|EDU96686.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC508]
gi|190907274|gb|EDV66872.1| appr-1-p processing enzyme domain protein [Escherichia coli F11]
gi|192957182|gb|EDV87631.1| appr-1-p processing enzyme domain protein [Escherichia coli
E110019]
gi|194419349|gb|EDX35431.1| appr-1-p processing enzyme domain protein [Shigella dysenteriae
1012]
gi|194422998|gb|EDX38992.1| appr-1-p processing enzyme domain protein [Escherichia coli 101-1]
gi|208725420|gb|EDZ75021.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC4206]
gi|208731574|gb|EDZ80262.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC4045]
gi|208737599|gb|EDZ85282.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC4042]
gi|209157650|gb|ACI35083.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. EC4115]
gi|209773678|gb|ACI85151.1| putative polyprotein [Escherichia coli]
gi|209773680|gb|ACI85152.1| putative polyprotein [Escherichia coli]
gi|209773682|gb|ACI85153.1| putative polyprotein [Escherichia coli]
gi|209773684|gb|ACI85154.1| putative polyprotein [Escherichia coli]
gi|209773686|gb|ACI85155.1| putative polyprotein [Escherichia coli]
gi|215264327|emb|CAS08684.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
gi|217318600|gb|EEC27026.1| appr-1-p processing enzyme domain protein [Escherichia coli O157:H7
str. TW14588]
gi|218360391|emb|CAQ97943.1| conserved hypothetical protein [Escherichia coli IAI1]
gi|218364695|emb|CAR02385.1| conserved hypothetical protein [Escherichia coli S88]
gi|218370438|emb|CAR18245.1| conserved hypothetical protein [Escherichia coli IAI39]
gi|218426562|emb|CAR07390.1| conserved hypothetical protein [Escherichia coli ED1a]
gi|222032799|emb|CAP75538.1| UPF0189 protein ymdB [Escherichia coli LF82]
gi|226898182|gb|EEH84441.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|227836803|gb|EEJ47269.1| appr-1-p processing enzyme domain protein [Escherichia coli 83972]
gi|238860462|gb|ACR62460.1| conserved protein [Escherichia coli BW2952]
gi|242376851|emb|CAQ31566.1| regulator of RNase III activity [Escherichia coli BL21(DE3)]
gi|253324974|gb|ACT29576.1| Appr-1-p processing domain protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253973053|gb|ACT38724.1| hypothetical protein ECB_01042 [Escherichia coli B str. REL606]
gi|253977267|gb|ACT42937.1| hypothetical protein ECD_01042 [Escherichia coli BL21(DE3)]
gi|254591829|gb|ACT71190.1| conserved protein [Escherichia coli O157:H7 str. TW14359]
gi|260449814|gb|ACX40236.1| Appr-1-p processing domain protein [Escherichia coli DH1]
gi|281178155|dbj|BAI54485.1| conserved hypothetical protein [Escherichia coli SE15]
gi|290761938|gb|ADD55899.1| UPF0189 protein ymdB [Escherichia coli O55:H7 str. CB9615]
gi|291434401|gb|EFF07374.1| ymdB protein [Escherichia coli B185]
gi|291469884|gb|EFF12368.1| hypothetical protein ECEG_00351 [Escherichia coli B354]
gi|294490172|gb|ADE88928.1| appr-1-p processing enzyme domain protein [Escherichia coli
IHE3034]
gi|299877432|gb|EFI85643.1| RNase III regulator YmdB [Escherichia coli MS 196-1]
gi|300297193|gb|EFJ53578.1| RNase III regulator YmdB [Escherichia coli MS 185-1]
gi|300307118|gb|EFJ61638.1| RNase III regulator YmdB [Escherichia coli MS 200-1]
gi|300318570|gb|EFJ68354.1| RNase III regulator YmdB [Escherichia coli MS 175-1]
gi|300410591|gb|EFJ94129.1| RNase III regulator YmdB [Escherichia coli MS 45-1]
gi|300450484|gb|EFK14104.1| RNase III regulator YmdB [Escherichia coli MS 116-1]
gi|300463569|gb|EFK27062.1| RNase III regulator YmdB [Escherichia coli MS 187-1]
gi|301076741|gb|EFK91547.1| RNase III regulator YmdB [Escherichia coli MS 146-1]
gi|305852744|gb|EFM53192.1| hypothetical protein ECNC101_18754 [Escherichia coli NC101]
gi|307553048|gb|ADN45823.1| putative polyprotein [Escherichia coli ABU 83972]
gi|307627485|gb|ADN71789.1| hypothetical protein UM146_12100 [Escherichia coli UM146]
gi|309701316|emb|CBJ00617.1| putative DNA and/or RNA unwinding protein [Escherichia coli ETEC
H10407]
gi|312286287|gb|EFR14200.1| macro domain protein [Escherichia coli 2362-75]
gi|312945608|gb|ADR26435.1| hypothetical protein NRG857_05040 [Escherichia coli O83:H1 str. NRG
857C]
gi|315135678|dbj|BAJ42837.1| hypothetical protein ECDH1ME8569_0981 [Escherichia coli DH1]
gi|315287401|gb|EFU46812.1| RNase III regulator YmdB [Escherichia coli MS 110-3]
gi|315291092|gb|EFU50455.1| RNase III regulator YmdB [Escherichia coli MS 153-1]
gi|315296674|gb|EFU55969.1| RNase III regulator YmdB [Escherichia coli MS 16-3]
gi|315618214|gb|EFU98804.1| macro domain protein [Escherichia coli 3431]
gi|320177334|gb|EFW52337.1| hypothetical protein SDB_00196 [Shigella dysenteriae CDC 74-1112]
gi|320186004|gb|EFW60750.1| hypothetical protein SGF_01790 [Shigella flexneri CDC 796-83]
gi|320189727|gb|EFW64383.1| hypothetical protein ECoD_03627 [Escherichia coli O157:H7 str.
EC1212]
gi|320196475|gb|EFW71098.1| hypothetical protein EcoM_01015 [Escherichia coli WV_060327]
gi|320637497|gb|EFX07297.1| RNase III inhibitor [Escherichia coli O157:H7 str. G5101]
gi|320643058|gb|EFX12259.1| RNase III inhibitor [Escherichia coli O157:H- str. 493-89]
gi|320648515|gb|EFX17170.1| RNase III inhibitor [Escherichia coli O157:H- str. H 2687]
gi|320653830|gb|EFX21904.1| RNase III inhibitor [Escherichia coli O55:H7 str. 3256-97 TW 07815]
gi|320659310|gb|EFX26879.1| RNase III inhibitor [Escherichia coli O55:H7 str. USDA 5905]
gi|320664444|gb|EFX31595.1| RNase III inhibitor [Escherichia coli O157:H7 str. LSU-61]
gi|323165536|gb|EFZ51323.1| macro domain protein [Shigella sonnei 53G]
gi|323174839|gb|EFZ60454.1| macro domain protein [Escherichia coli LT-68]
gi|323190554|gb|EFZ75826.1| macro domain protein [Escherichia coli RN587/1]
gi|323937786|gb|EGB34050.1| macro domain-containing protein [Escherichia coli E1520]
gi|323942514|gb|EGB38681.1| macro domain-containing protein [Escherichia coli E482]
gi|323953267|gb|EGB49133.1| macro domain-containing protein [Escherichia coli H252]
gi|323958057|gb|EGB53767.1| macro domain-containing protein [Escherichia coli H263]
gi|323962646|gb|EGB58224.1| macro domain-containing protein [Escherichia coli H489]
gi|323966988|gb|EGB62414.1| macro domain-containing protein [Escherichia coli M863]
gi|323973364|gb|EGB68553.1| macro domain-containing protein [Escherichia coli TA007]
gi|323976580|gb|EGB71668.1| macro domain-containing protein [Escherichia coli TW10509]
gi|324007884|gb|EGB77103.1| RNase III regulator YmdB [Escherichia coli MS 57-2]
gi|324013317|gb|EGB82536.1| RNase III regulator YmdB [Escherichia coli MS 60-1]
gi|326339267|gb|EGD63081.1| hypothetical protein ECF_04686 [Escherichia coli O157:H7 str. 1125]
gi|326344774|gb|EGD68522.1| RNase III regulator YmdB [Escherichia coli O157:H7 str. 1044]
gi|327253442|gb|EGE65080.1| macro domain protein [Escherichia coli STEC_7v]
gi|330910856|gb|EGH39366.1| Macro domain, possibly ADP-ribose binding module [Escherichia coli
AA86]
gi|331038384|gb|EGI10604.1| RNase III regulator YmdB [Escherichia coli H736]
gi|331045052|gb|EGI17179.1| RNase III regulator YmdB [Escherichia coli M605]
gi|331050374|gb|EGI22432.1| RNase III regulator YmdB [Escherichia coli M718]
gi|331055349|gb|EGI27358.1| RNase III regulator YmdB [Escherichia coli TA206]
gi|331080176|gb|EGI51355.1| RNase III regulator YmdB [Escherichia coli H299]
gi|332092934|gb|EGI98002.1| macro domain protein [Shigella dysenteriae 155-74]
gi|332094126|gb|EGI99178.1| macro domain protein [Shigella boydii 3594-74]
gi|333005828|gb|EGK25345.1| macro domain protein [Shigella flexneri VA-6]
gi|333969118|gb|AEG35923.1| Hypothetical protein ECNA114_1100 [Escherichia coli NA114]
gi|335576401|gb|EGM62656.1| regulator of RNase III activity [Shigella flexneri J1713]
gi|339414166|gb|AEJ55838.1| macro domain protein [Escherichia coli UMNF18]
gi|342363591|gb|EGU27698.1| RNase III inhibitor [Escherichia coli XH140A]
gi|344193243|gb|EGV47326.1| RNase III inhibitor [Escherichia coli XH001]
gi|345364531|gb|EGW96653.1| macro domain protein [Escherichia coli STEC_EH250]
gi|345378349|gb|EGX10280.1| macro domain protein [Escherichia coli STEC_MHI813]
gi|345379650|gb|EGX11558.1| macro domain protein [Escherichia coli G58-1]
gi|345389153|gb|EGX18959.1| macro domain protein [Escherichia coli STEC_S1191]
gi|349737236|gb|AEQ11942.1| RNase III inhibitor during cold shock, UPF0189 family [Escherichia
coli O7:K1 str. CE10]
gi|355352522|gb|EHG01697.1| hypothetical protein i01_01351 [Escherichia coli cloneA_i1]
gi|355419579|gb|AER83776.1| hypothetical protein i02_1195 [Escherichia coli str. 'clone D i2']
gi|355424499|gb|AER88695.1| hypothetical protein i14_1195 [Escherichia coli str. 'clone D i14']
gi|359331714|dbj|BAL38161.1| conserved protein [Escherichia coli str. K-12 substr. MDS42]
gi|371608013|gb|EHN96576.1| hypothetical protein ESOG_00931 [Escherichia coli E101]
gi|371609380|gb|EHN97919.1| hypothetical protein ESPG_02164 [Escherichia coli H397]
gi|371612612|gb|EHO01121.1| hypothetical protein ESNG_01374 [Escherichia coli B093]
gi|374358169|gb|AEZ39876.1| RNase III inhibitor [Escherichia coli O55:H7 str. RM12579]
gi|377847211|gb|EHU12213.1| regulator of RNase III activity [Escherichia coli DEC1A]
gi|377849157|gb|EHU14132.1| regulator of RNase III activity [Escherichia coli DEC1C]
gi|377852037|gb|EHU16968.1| regulator of RNase III activity [Escherichia coli DEC1B]
gi|377864595|gb|EHU29388.1| regulator of RNase III activity [Escherichia coli DEC1E]
gi|377867233|gb|EHU31995.1| hypothetical protein ECDEC2A_1396 [Escherichia coli DEC2A]
gi|377877532|gb|EHU42125.1| regulator of RNase III activity [Escherichia coli DEC2B]
gi|377882635|gb|EHU47174.1| regulator of RNase III activity [Escherichia coli DEC2D]
gi|377883257|gb|EHU47782.1| regulator of RNase III activity [Escherichia coli DEC2C]
gi|377896951|gb|EHU61340.1| regulator of RNase III activity [Escherichia coli DEC2E]
gi|377898952|gb|EHU63311.1| regulator of RNase III activity [Escherichia coli DEC3A]
gi|377901341|gb|EHU65663.1| regulator of RNase III activity [Escherichia coli DEC3B]
gi|377910748|gb|EHU74934.1| regulator of RNase III activity [Escherichia coli DEC3C]
gi|377915899|gb|EHU80000.1| regulator of RNase III activity [Escherichia coli DEC3D]
gi|377917620|gb|EHU81678.1| regulator of RNase III activity [Escherichia coli DEC3E]
gi|377929536|gb|EHU93432.1| regulator of RNase III activity [Escherichia coli DEC3F]
gi|377931870|gb|EHU95728.1| regulator of RNase III activity [Escherichia coli DEC4A]
gi|377936750|gb|EHV00543.1| regulator of RNase III activity [Escherichia coli DEC4B]
gi|377948232|gb|EHV11884.1| regulator of RNase III activity [Escherichia coli DEC4D]
gi|377948409|gb|EHV12060.1| regulator of RNase III activity [Escherichia coli DEC4C]
gi|377952510|gb|EHV16094.1| regulator of RNase III activity [Escherichia coli DEC4E]
gi|377963696|gb|EHV27138.1| regulator of RNase III activity [Escherichia coli DEC4F]
gi|377964704|gb|EHV28139.1| regulator of RNase III activity [Escherichia coli DEC5A]
gi|377971290|gb|EHV34647.1| regulator of RNase III activity [Escherichia coli DEC5B]
gi|377978048|gb|EHV41328.1| regulator of RNase III activity [Escherichia coli DEC5C]
gi|377979459|gb|EHV42736.1| regulator of RNase III activity [Escherichia coli DEC5D]
gi|377986839|gb|EHV50029.1| hypothetical protein ECDEC5E_1181 [Escherichia coli DEC5E]
gi|377997801|gb|EHV60899.1| hypothetical protein ECDEC6A_1283 [Escherichia coli DEC6A]
gi|377998629|gb|EHV61720.1| regulator of RNase III activity [Escherichia coli DEC6B]
gi|378001909|gb|EHV64965.1| hypothetical protein ECDEC6C_1175 [Escherichia coli DEC6C]
gi|378011942|gb|EHV74878.1| hypothetical protein ECDEC6D_1196 [Escherichia coli DEC6D]
gi|378014004|gb|EHV76917.1| regulator of RNase III activity [Escherichia coli DEC6E]
gi|380348997|gb|EIA37273.1| RNase III inhibitor [Escherichia coli SCI-07]
gi|383103401|gb|AFG40910.1| hypothetical protein P12B_c2062 [Escherichia coli P12b]
gi|385156289|gb|EIF18287.1| RNase III inhibitor [Escherichia coli O32:H37 str. P4]
gi|385538928|gb|EIF85778.1| UPF0189 protein ymdB [Escherichia coli M919]
gi|385711293|gb|EIG48252.1| UPF0189 protein ymdB [Escherichia coli H730]
gi|386122712|gb|EIG71320.1| UPF0189 protein ymdB [Escherichia sp. 4_1_40B]
gi|386142386|gb|EIG83524.1| macro domain protein [Escherichia coli 1.2741]
gi|386145978|gb|EIG92429.1| macro domain protein [Escherichia coli 97.0246]
gi|386153865|gb|EIH05146.1| macro domain protein [Escherichia coli 5.0588]
gi|386175668|gb|EIH47657.1| macro domain protein [Escherichia coli 99.0741]
gi|386208654|gb|EII13155.1| macro domain protein [Escherichia coli 5.0959]
gi|386227136|gb|EII49386.1| macro domain protein [Escherichia coli 2.3916]
gi|386233187|gb|EII65172.1| macro domain protein [Escherichia coli 2.4168]
gi|386238713|gb|EII75648.1| macro domain protein [Escherichia coli 3.2303]
gi|386243900|gb|EII85633.1| macro domain protein [Escherichia coli 3003]
gi|386256062|gb|EIJ05750.1| macro domain protein [Escherichia coli B41]
gi|386795386|gb|AFJ28420.1| hypothetical protein CDCO157_1359 [Escherichia coli Xuzhou21]
gi|388340926|gb|EIL07101.1| RNase III inhibitor [Escherichia coli O103:H25 str. CVM9340]
gi|388386414|gb|EIL48063.1| hypothetical protein EC54115_20857 [Escherichia coli 541-15]
gi|388402232|gb|EIL62812.1| hypothetical protein EC75_15759 [Escherichia coli 75]
gi|388405597|gb|EIL66023.1| hypothetical protein EC5411_09675 [Escherichia coli 541-1]
gi|388417018|gb|EIL76886.1| hypothetical protein ECHM605_13186 [Escherichia coli HM605]
gi|390648995|gb|EIN27621.1| RNase III regulator YmdB [Escherichia coli FRIK1996]
gi|390649375|gb|EIN27895.1| RNase III regulator YmdB [Escherichia coli FDA517]
gi|390649963|gb|EIN28431.1| RNase III regulator YmdB [Escherichia coli FDA505]
gi|390667724|gb|EIN44680.1| RNase III regulator YmdB [Escherichia coli 93-001]
gi|390669881|gb|EIN46473.1| RNase III regulator YmdB [Escherichia coli FRIK1990]
gi|390670122|gb|EIN46706.1| RNase III regulator YmdB [Escherichia coli FRIK1985]
gi|390686350|gb|EIN61708.1| RNase III regulator YmdB [Escherichia coli PA3]
gi|390689121|gb|EIN64100.1| RNase III regulator YmdB [Escherichia coli PA5]
gi|390689271|gb|EIN64239.1| RNase III regulator YmdB [Escherichia coli PA9]
gi|390706109|gb|EIN79718.1| RNase III regulator YmdB [Escherichia coli PA10]
gi|390706971|gb|EIN80435.1| RNase III regulator YmdB [Escherichia coli PA15]
gi|390707602|gb|EIN80943.1| RNase III regulator YmdB [Escherichia coli PA14]
gi|390718416|gb|EIN91170.1| RNase III regulator YmdB [Escherichia coli PA22]
gi|390730835|gb|EIO02780.1| RNase III regulator YmdB [Escherichia coli PA24]
gi|390731149|gb|EIO03069.1| RNase III regulator YmdB [Escherichia coli PA25]
gi|390733575|gb|EIO05152.1| RNase III regulator YmdB [Escherichia coli PA28]
gi|390748990|gb|EIO19304.1| RNase III regulator YmdB [Escherichia coli PA31]
gi|390749750|gb|EIO19944.1| RNase III regulator YmdB [Escherichia coli PA32]
gi|390751554|gb|EIO21443.1| RNase III regulator YmdB [Escherichia coli PA33]
gi|390760722|gb|EIO30035.1| RNase III regulator YmdB [Escherichia coli PA40]
gi|390773882|gb|EIO42200.1| RNase III regulator YmdB [Escherichia coli PA41]
gi|390775053|gb|EIO43141.1| RNase III regulator YmdB [Escherichia coli PA42]
gi|390776154|gb|EIO44118.1| RNase III regulator YmdB [Escherichia coli PA39]
gi|390784350|gb|EIO51919.1| RNase III regulator YmdB [Escherichia coli TW06591]
gi|390793289|gb|EIO60629.1| RNase III regulator YmdB [Escherichia coli TW10246]
gi|390800218|gb|EIO67321.1| RNase III regulator YmdB [Escherichia coli TW11039]
gi|390803601|gb|EIO70601.1| RNase III regulator YmdB [Escherichia coli TW07945]
gi|390810498|gb|EIO77255.1| RNase III regulator YmdB [Escherichia coli TW09109]
gi|390817996|gb|EIO84397.1| RNase III regulator YmdB [Escherichia coli TW10119]
gi|390818100|gb|EIO84500.1| RNase III regulator YmdB [Escherichia coli TW09098]
gi|390834829|gb|EIO99659.1| RNase III regulator YmdB [Escherichia coli EC4203]
gi|390836591|gb|EIP01100.1| RNase III regulator YmdB [Escherichia coli TW09195]
gi|390838163|gb|EIP02479.1| RNase III regulator YmdB [Escherichia coli EC4196]
gi|390853427|gb|EIP16421.1| RNase III regulator YmdB [Escherichia coli TW14301]
gi|390855252|gb|EIP17990.1| RNase III regulator YmdB [Escherichia coli TW14313]
gi|390856116|gb|EIP18749.1| RNase III regulator YmdB [Escherichia coli EC4421]
gi|390868769|gb|EIP30478.1| RNase III regulator YmdB [Escherichia coli EC4422]
gi|390872807|gb|EIP34086.1| RNase III regulator YmdB [Escherichia coli EC4013]
gi|390881814|gb|EIP42370.1| RNase III regulator YmdB [Escherichia coli EC4402]
gi|390884957|gb|EIP45215.1| RNase III regulator YmdB [Escherichia coli EC4439]
gi|390889100|gb|EIP48862.1| RNase III regulator YmdB [Escherichia coli EC4436]
gi|390902550|gb|EIP61639.1| RNase III regulator YmdB [Escherichia coli EC1738]
gi|390904868|gb|EIP63840.1| RNase III regulator YmdB [Escherichia coli EC4437]
gi|390909249|gb|EIP68044.1| RNase III regulator YmdB [Escherichia coli EC4448]
gi|390910949|gb|EIP69673.1| RNase III regulator YmdB [Escherichia coli EC1734]
gi|390923343|gb|EIP81269.1| RNase III regulator YmdB [Escherichia coli EC1863]
gi|390924533|gb|EIP82289.1| RNase III regulator YmdB [Escherichia coli EC1845]
gi|391252571|gb|EIQ11765.1| hypothetical protein SF285071_1233 [Shigella flexneri 2850-71]
gi|391255197|gb|EIQ14346.1| hypothetical protein SFCCH060_1048 [Shigella flexneri CCH060]
gi|391256294|gb|EIQ15427.1| hypothetical protein SFK1770_1645 [Shigella flexneri K-1770]
gi|391270899|gb|EIQ29782.1| hypothetical protein SB96558_2438 [Shigella boydii 965-58]
gi|391279125|gb|EIQ37815.1| hypothetical protein SB444474_2329 [Shigella boydii 4444-74]
gi|391285602|gb|EIQ44178.1| hypothetical protein SS323385_2150 [Shigella sonnei 3233-85]
gi|391286509|gb|EIQ45049.1| hypothetical protein SS322685_1642 [Shigella sonnei 3226-85]
gi|391293433|gb|EIQ51712.1| regulator of RNase III activity [Shigella sonnei 4822-66]
gi|391301041|gb|EIQ58944.1| hypothetical protein SD22575_2703 [Shigella dysenteriae 225-75]
gi|397902698|gb|EJL19011.1| regulator of RNase III activity [Shigella sonnei str. Moseley]
gi|404292021|gb|EJZ48864.1| UPF0189 protein ymdB [Escherichia sp. 1_1_43]
gi|404341223|gb|EJZ67633.1| regulator of RNase III activity [Shigella flexneri 1485-80]
gi|408070311|gb|EKH04676.1| RNase III regulator YmdB [Escherichia coli PA7]
gi|408074289|gb|EKH08573.1| RNase III regulator YmdB [Escherichia coli FRIK920]
gi|408083636|gb|EKH17455.1| RNase III regulator YmdB [Escherichia coli PA34]
gi|408086819|gb|EKH20321.1| RNase III regulator YmdB [Escherichia coli FDA506]
gi|408091499|gb|EKH24722.1| RNase III regulator YmdB [Escherichia coli FDA507]
gi|408099456|gb|EKH32101.1| RNase III regulator YmdB [Escherichia coli FDA504]
gi|408106611|gb|EKH38705.1| RNase III regulator YmdB [Escherichia coli FRIK1999]
gi|408113172|gb|EKH44776.1| RNase III regulator YmdB [Escherichia coli FRIK1997]
gi|408118145|gb|EKH49306.1| RNase III regulator YmdB [Escherichia coli NE1487]
gi|408126897|gb|EKH57434.1| RNase III regulator YmdB [Escherichia coli NE037]
gi|408128777|gb|EKH59041.1| RNase III regulator YmdB [Escherichia coli FRIK2001]
gi|408136902|gb|EKH66630.1| RNase III regulator YmdB [Escherichia coli PA4]
gi|408148029|gb|EKH76934.1| RNase III regulator YmdB [Escherichia coli PA23]
gi|408148906|gb|EKH77662.1| RNase III regulator YmdB [Escherichia coli PA49]
gi|408154190|gb|EKH82555.1| RNase III regulator YmdB [Escherichia coli PA45]
gi|408164186|gb|EKH91999.1| RNase III regulator YmdB [Escherichia coli TT12B]
gi|408168765|gb|EKH96126.1| RNase III regulator YmdB [Escherichia coli MA6]
gi|408169587|gb|EKH96846.1| RNase III regulator YmdB [Escherichia coli 5905]
gi|408184485|gb|EKI10803.1| RNase III regulator YmdB [Escherichia coli CB7326]
gi|408188457|gb|EKI14255.1| RNase III regulator YmdB [Escherichia coli 5412]
gi|408188639|gb|EKI14432.1| RNase III regulator YmdB [Escherichia coli EC96038]
gi|408195552|gb|EKI20922.1| RNase III regulator YmdB [Escherichia coli TW15901]
gi|408204520|gb|EKI29464.1| RNase III regulator YmdB [Escherichia coli TW00353]
gi|408204909|gb|EKI29815.1| RNase III regulator YmdB [Escherichia coli ARS4.2123]
gi|408228363|gb|EKI51900.1| RNase III regulator YmdB [Escherichia coli PA38]
gi|408230706|gb|EKI54065.1| RNase III regulator YmdB [Escherichia coli N1]
gi|408234984|gb|EKI57973.1| RNase III regulator YmdB [Escherichia coli EC1735]
gi|408246656|gb|EKI68914.1| RNase III regulator YmdB [Escherichia coli EC1736]
gi|408249959|gb|EKI71866.1| RNase III regulator YmdB [Escherichia coli EC1737]
gi|408254927|gb|EKI76391.1| RNase III regulator YmdB [Escherichia coli EC1846]
gi|408265367|gb|EKI86074.1| RNase III regulator YmdB [Escherichia coli EC1847]
gi|408266904|gb|EKI87388.1| RNase III regulator YmdB [Escherichia coli EC1848]
gi|408275279|gb|EKI95242.1| RNase III regulator YmdB [Escherichia coli EC1849]
gi|408282347|gb|EKJ01676.1| RNase III regulator YmdB [Escherichia coli EC1850]
gi|408284230|gb|EKJ03353.1| RNase III regulator YmdB [Escherichia coli EC1856]
gi|408297485|gb|EKJ15568.1| RNase III regulator YmdB [Escherichia coli EC1862]
gi|408298085|gb|EKJ16054.1| RNase III regulator YmdB [Escherichia coli EC1864]
gi|408314015|gb|EKJ30498.1| RNase III regulator YmdB [Escherichia coli EC1868]
gi|408314101|gb|EKJ30582.1| RNase III regulator YmdB [Escherichia coli EC1866]
gi|408329217|gb|EKJ44707.1| RNase III regulator YmdB [Escherichia coli EC1869]
gi|408332873|gb|EKJ47886.1| RNase III regulator YmdB [Escherichia coli NE098]
gi|408333787|gb|EKJ48707.1| RNase III regulator YmdB [Escherichia coli EC1870]
gi|408348317|gb|EKJ62415.1| RNase III regulator YmdB [Escherichia coli FRIK523]
gi|408352163|gb|EKJ65786.1| RNase III regulator YmdB [Escherichia coli 0.1304]
gi|408458402|gb|EKJ82189.1| hypothetical protein ECAD30_24850 [Escherichia coli AD30]
gi|408555837|gb|EKK32574.1| regulator of RNase III activity [Escherichia coli 5.2239]
gi|408556446|gb|EKK33039.1| regulator of RNase III activity [Escherichia coli 3.4870]
gi|408556771|gb|EKK33347.1| RNase III regulator YmdB [Escherichia coli 6.0172]
gi|408571397|gb|EKK47336.1| RNase III regulator YmdB [Escherichia coli 8.0566]
gi|408572357|gb|EKK48266.1| regulator of RNase III activity [Escherichia coli 8.0569]
gi|408582559|gb|EKK57773.1| regulator of RNase III activity [Escherichia coli 8.0586]
gi|408586563|gb|EKK61308.1| regulator of RNase III activity [Escherichia coli 8.2524]
gi|408587092|gb|EKK61768.1| RNase III regulator YmdB [Escherichia coli 10.0833]
gi|408601471|gb|EKK75273.1| regulator of RNase III activity [Escherichia coli 10.0869]
gi|408604207|gb|EKK77791.1| RNase III regulator YmdB [Escherichia coli 8.0416]
gi|408604328|gb|EKK77907.1| regulator of RNase III activity [Escherichia coli 88.0221]
gi|408615487|gb|EKK88679.1| regulator of RNase III activity [Escherichia coli 10.0821]
gi|427212230|gb|EKV81853.1| regulator of RNase III activity [Escherichia coli 88.1042]
gi|427213230|gb|EKV82658.1| regulator of RNase III activity [Escherichia coli 88.1467]
gi|427213491|gb|EKV82898.1| regulator of RNase III activity [Escherichia coli 89.0511]
gi|427231259|gb|EKV99315.1| regulator of RNase III activity [Escherichia coli 90.2281]
gi|427231925|gb|EKV99853.1| regulator of RNase III activity [Escherichia coli 90.0039]
gi|427232205|gb|EKW00103.1| regulator of RNase III activity [Escherichia coli 90.0091]
gi|427248875|gb|EKW15763.1| regulator of RNase III activity [Escherichia coli 93.0056]
gi|427249905|gb|EKW16653.1| regulator of RNase III activity [Escherichia coli 93.0055]
gi|427250620|gb|EKW17276.1| regulator of RNase III activity [Escherichia coli 94.0618]
gi|427267623|gb|EKW32853.1| regulator of RNase III activity [Escherichia coli 95.0943]
gi|427268243|gb|EKW33398.1| regulator of RNase III activity [Escherichia coli 95.0183]
gi|427270833|gb|EKW35697.1| regulator of RNase III activity [Escherichia coli 95.1288]
gi|427284123|gb|EKW48249.1| regulator of RNase III activity [Escherichia coli 96.0428]
gi|427288258|gb|EKW51900.1| regulator of RNase III activity [Escherichia coli 96.0427]
gi|427290076|gb|EKW53572.1| regulator of RNase III activity [Escherichia coli 96.0939]
gi|427302662|gb|EKW65445.1| regulator of RNase III activity [Escherichia coli 96.0932]
gi|427303512|gb|EKW66225.1| regulator of RNase III activity [Escherichia coli 97.0003]
gi|427307107|gb|EKW69592.1| regulator of RNase III activity [Escherichia coli 96.0107]
gi|427319076|gb|EKW80904.1| regulator of RNase III activity [Escherichia coli 97.1742]
gi|427320174|gb|EKW81950.1| regulator of RNase III activity [Escherichia coli 97.0007]
gi|427332158|gb|EKW93321.1| regulator of RNase III activity [Escherichia coli 99.0713]
gi|427332268|gb|EKW93428.1| RNase III regulator YmdB [Escherichia coli 99.0678]
gi|427332929|gb|EKW94048.1| regulator of RNase III activity [Escherichia coli 99.0672]
gi|429258278|gb|EKY42167.1| regulator of RNase III activity [Escherichia coli 96.0109]
gi|429259699|gb|EKY43351.1| regulator of RNase III activity [Escherichia coli 97.0010]
gi|430878902|gb|ELC02263.1| hypothetical protein WCC_01319 [Escherichia coli KTE4]
gi|430908786|gb|ELC30176.1| hypothetical protein WCY_01770 [Escherichia coli KTE16]
gi|430910046|gb|ELC31403.1| hypothetical protein WCU_00897 [Escherichia coli KTE15]
gi|430917221|gb|ELC38269.1| hypothetical protein WEI_01820 [Escherichia coli KTE25]
gi|430921684|gb|ELC42508.1| hypothetical protein WE9_01391 [Escherichia coli KTE21]
gi|430931988|gb|ELC52422.1| hypothetical protein WEO_01022 [Escherichia coli KTE28]
gi|430936799|gb|ELC57066.1| hypothetical protein WG9_01620 [Escherichia coli KTE39]
gi|430941873|gb|ELC62013.1| hypothetical protein WGI_01602 [Escherichia coli KTE44]
gi|430946755|gb|ELC66678.1| hypothetical protein A137_01558 [Escherichia coli KTE178]
gi|430954974|gb|ELC73767.1| hypothetical protein A13K_01470 [Escherichia coli KTE187]
gi|430964994|gb|ELC82436.1| hypothetical protein A13M_01417 [Escherichia coli KTE188]
gi|430968574|gb|ELC85800.1| hypothetical protein A13O_01335 [Escherichia coli KTE189]
gi|430974171|gb|ELC91104.1| hypothetical protein A13S_01662 [Escherichia coli KTE191]
gi|430982394|gb|ELC99084.1| hypothetical protein A13W_00215 [Escherichia coli KTE193]
gi|430983939|gb|ELD00589.1| hypothetical protein A15C_01789 [Escherichia coli KTE201]
gi|430995987|gb|ELD12274.1| hypothetical protein A15K_00928 [Escherichia coli KTE205]
gi|430999562|gb|ELD15644.1| hypothetical protein A15M_01268 [Escherichia coli KTE206]
gi|431017321|gb|ELD30831.1| hypothetical protein A15Y_01211 [Escherichia coli KTE212]
gi|431026874|gb|ELD39941.1| hypothetical protein A173_02102 [Escherichia coli KTE214]
gi|431031292|gb|ELD44190.1| hypothetical protein A177_01379 [Escherichia coli KTE216]
gi|431040640|gb|ELD51174.1| hypothetical protein A17E_00826 [Escherichia coli KTE220]
gi|431043551|gb|ELD53868.1| hypothetical protein A17M_01179 [Escherichia coli KTE224]
gi|431053769|gb|ELD63370.1| hypothetical protein A17Y_01299 [Escherichia coli KTE230]
gi|431085801|gb|ELD91905.1| hypothetical protein A1S3_01476 [Escherichia coli KTE47]
gi|431093609|gb|ELD99274.1| hypothetical protein A1S7_01755 [Escherichia coli KTE49]
gi|431096622|gb|ELE02083.1| hypothetical protein A1SA_01768 [Escherichia coli KTE51]
gi|431101634|gb|ELE06544.1| hypothetical protein A1SE_01613 [Escherichia coli KTE53]
gi|431107149|gb|ELE11335.1| hypothetical protein A1SK_03519 [Escherichia coli KTE56]
gi|431110274|gb|ELE14201.1| hypothetical protein A1SI_01761 [Escherichia coli KTE55]
gi|431122554|gb|ELE25421.1| hypothetical protein A1SO_01648 [Escherichia coli KTE58]
gi|431132100|gb|ELE34116.1| hypothetical protein A1SS_01609 [Escherichia coli KTE60]
gi|431132691|gb|ELE34690.1| hypothetical protein A1SW_01617 [Escherichia coli KTE62]
gi|431139241|gb|ELE41037.1| hypothetical protein A1U7_01893 [Escherichia coli KTE67]
gi|431142506|gb|ELE44254.1| hypothetical protein A1U5_01407 [Escherichia coli KTE66]
gi|431149971|gb|ELE51029.1| hypothetical protein A1UG_01165 [Escherichia coli KTE72]
gi|431155899|gb|ELE56640.1| hypothetical protein A1UM_01399 [Escherichia coli KTE75]
gi|431164592|gb|ELE64983.1| hypothetical protein A1UQ_01480 [Escherichia coli KTE77]
gi|431173206|gb|ELE73287.1| hypothetical protein A1UY_01669 [Escherichia coli KTE81]
gi|431182286|gb|ELE82107.1| hypothetical protein A1W5_01318 [Escherichia coli KTE86]
gi|431192222|gb|ELE91572.1| hypothetical protein A1W7_01484 [Escherichia coli KTE87]
gi|431194901|gb|ELE94115.1| hypothetical protein A1WE_00775 [Escherichia coli KTE93]
gi|431202139|gb|ELF00835.1| hypothetical protein A1WY_01681 [Escherichia coli KTE111]
gi|431212514|gb|ELF10441.1| hypothetical protein A1Y7_01524 [Escherichia coli KTE119]
gi|431216554|gb|ELF14151.1| hypothetical protein A1YU_00601 [Escherichia coli KTE142]
gi|431223444|gb|ELF20691.1| hypothetical protein A31A_01729 [Escherichia coli KTE156]
gi|431228761|gb|ELF25424.1| hypothetical protein A31G_03186 [Escherichia coli KTE161]
gi|431235696|gb|ELF30943.1| hypothetical protein A31I_01239 [Escherichia coli KTE162]
gi|431245488|gb|ELF39773.1| hypothetical protein A31Q_01538 [Escherichia coli KTE171]
gi|431245761|gb|ELF40040.1| hypothetical protein A31M_01184 [Escherichia coli KTE169]
gi|431250514|gb|ELF44573.1| hypothetical protein WCG_03270 [Escherichia coli KTE6]
gi|431258807|gb|ELF51570.1| hypothetical protein WCI_01043 [Escherichia coli KTE8]
gi|431265182|gb|ELF56879.1| hypothetical protein WCK_01702 [Escherichia coli KTE9]
gi|431267605|gb|ELF59122.1| hypothetical protein WE1_01556 [Escherichia coli KTE17]
gi|431274904|gb|ELF65949.1| hypothetical protein WE3_01558 [Escherichia coli KTE18]
gi|431276862|gb|ELF67877.1| hypothetical protein WGK_01640 [Escherichia coli KTE45]
gi|431284927|gb|ELF75768.1| hypothetical protein WGE_01787 [Escherichia coli KTE42]
gi|431285393|gb|ELF76229.1| hypothetical protein WEE_01481 [Escherichia coli KTE23]
gi|431293466|gb|ELF83759.1| hypothetical protein WGG_01181 [Escherichia coli KTE43]
gi|431304359|gb|ELF92888.1| hypothetical protein WEA_00762 [Escherichia coli KTE22]
gi|431310196|gb|ELF98388.1| hypothetical protein A1S1_00997 [Escherichia coli KTE46]
gi|431317325|gb|ELG05105.1| hypothetical protein A1S9_02669 [Escherichia coli KTE50]
gi|431329243|gb|ELG16541.1| hypothetical protein A1SQ_01585 [Escherichia coli KTE59]
gi|431331304|gb|ELG18567.1| hypothetical protein A1SY_01740 [Escherichia coli KTE63]
gi|431340754|gb|ELG27775.1| hypothetical protein A1U3_00844 [Escherichia coli KTE65]
gi|431340892|gb|ELG27912.1| hypothetical protein A1US_01527 [Escherichia coli KTE78]
gi|431344426|gb|ELG31364.1| hypothetical protein A1UU_03013 [Escherichia coli KTE79]
gi|431349461|gb|ELG36290.1| hypothetical protein A1W3_01601 [Escherichia coli KTE84]
gi|431369434|gb|ELG55655.1| hypothetical protein A1Y5_01894 [Escherichia coli KTE118]
gi|431373639|gb|ELG59242.1| hypothetical protein A1YA_03228 [Escherichia coli KTE123]
gi|431396463|gb|ELG79941.1| hypothetical protein A1YS_01501 [Escherichia coli KTE141]
gi|431401497|gb|ELG84841.1| hypothetical protein A1YY_00844 [Escherichia coli KTE144]
gi|431404190|gb|ELG87448.1| hypothetical protein A313_04229 [Escherichia coli KTE147]
gi|431412996|gb|ELG95795.1| hypothetical protein A317_03585 [Escherichia coli KTE154]
gi|431424734|gb|ELH06830.1| hypothetical protein A31K_02903 [Escherichia coli KTE165]
gi|431428671|gb|ELH10612.1| hypothetical protein A13U_01529 [Escherichia coli KTE192]
gi|431434349|gb|ELH15999.1| hypothetical protein A13Y_01550 [Escherichia coli KTE194]
gi|431446421|gb|ELH27170.1| hypothetical protein A133_01554 [Escherichia coli KTE173]
gi|431448251|gb|ELH28969.1| hypothetical protein A135_01602 [Escherichia coli KTE175]
gi|431461715|gb|ELH41982.1| hypothetical protein A153_01719 [Escherichia coli KTE196]
gi|431465909|gb|ELH45989.1| hypothetical protein A13C_00062 [Escherichia coli KTE183]
gi|431469636|gb|ELH49565.1| hypothetical protein A155_01732 [Escherichia coli KTE197]
gi|431477803|gb|ELH57565.1| hypothetical protein A15E_01629 [Escherichia coli KTE202]
gi|431481188|gb|ELH60902.1| hypothetical protein A15S_03591 [Escherichia coli KTE209]
gi|431484251|gb|ELH63931.1| hypothetical protein A15O_01812 [Escherichia coli KTE207]
gi|431493385|gb|ELH72979.1| hypothetical protein A15W_01614 [Escherichia coli KTE211]
gi|431496990|gb|ELH76568.1| hypothetical protein A179_01887 [Escherichia coli KTE217]
gi|431502263|gb|ELH81154.1| hypothetical protein A175_01225 [Escherichia coli KTE215]
gi|431508962|gb|ELH87233.1| hypothetical protein A17A_01833 [Escherichia coli KTE218]
gi|431512649|gb|ELH90739.1| hypothetical protein A17K_01614 [Escherichia coli KTE223]
gi|431516864|gb|ELH94462.1| hypothetical protein A17W_04515 [Escherichia coli KTE229]
gi|431517812|gb|ELH95334.1| hypothetical protein A17S_02058 [Escherichia coli KTE227]
gi|431533936|gb|ELI10427.1| hypothetical protein WI5_01079 [Escherichia coli KTE104]
gi|431538898|gb|ELI14877.1| hypothetical protein WI9_01060 [Escherichia coli KTE106]
gi|431544630|gb|ELI19445.1| hypothetical protein WIA_01138 [Escherichia coli KTE109]
gi|431553256|gb|ELI27183.1| hypothetical protein WIE_01425 [Escherichia coli KTE113]
gi|431558081|gb|ELI31760.1| hypothetical protein WIC_01183 [Escherichia coli KTE112]
gi|431558945|gb|ELI32523.1| hypothetical protein WIG_01085 [Escherichia coli KTE117]
gi|431570066|gb|ELI42993.1| hypothetical protein WII_01154 [Escherichia coli KTE120]
gi|431573106|gb|ELI45917.1| hypothetical protein WIM_01109 [Escherichia coli KTE124]
gi|431586595|gb|ELI57986.1| hypothetical protein WIO_01101 [Escherichia coli KTE125]
gi|431591440|gb|ELI62356.1| hypothetical protein WIS_01048 [Escherichia coli KTE129]
gi|431599560|gb|ELI69265.1| hypothetical protein WIU_01054 [Escherichia coli KTE131]
gi|431604745|gb|ELI74146.1| hypothetical protein WIW_01107 [Escherichia coli KTE133]
gi|431608334|gb|ELI77677.1| hypothetical protein WIY_01083 [Escherichia coli KTE137]
gi|431618574|gb|ELI87542.1| hypothetical protein WK3_01125 [Escherichia coli KTE139]
gi|431621500|gb|ELI90296.1| hypothetical protein WK5_01109 [Escherichia coli KTE145]
gi|431630073|gb|ELI98414.1| hypothetical protein WK9_01206 [Escherichia coli KTE150]
gi|431632844|gb|ELJ01130.1| hypothetical protein WK7_01018 [Escherichia coli KTE148]
gi|431635756|gb|ELJ03924.1| hypothetical protein WKA_01098 [Escherichia coli KTE153]
gi|431647003|gb|ELJ14490.1| hypothetical protein WKC_01031 [Escherichia coli KTE157]
gi|431648572|gb|ELJ15948.1| hypothetical protein WKE_01079 [Escherichia coli KTE160]
gi|431663697|gb|ELJ30452.1| hypothetical protein WKM_00925 [Escherichia coli KTE167]
gi|431664680|gb|ELJ31413.1| hypothetical protein WKO_01200 [Escherichia coli KTE168]
gi|431674375|gb|ELJ40537.1| hypothetical protein WKQ_01194 [Escherichia coli KTE174]
gi|431677353|gb|ELJ43430.1| hypothetical protein WKS_01051 [Escherichia coli KTE176]
gi|431690784|gb|ELJ56258.1| hypothetical protein WKW_01077 [Escherichia coli KTE179]
gi|431692456|gb|ELJ57892.1| hypothetical protein WKY_01153 [Escherichia coli KTE180]
gi|431695252|gb|ELJ60567.1| hypothetical protein WGQ_01143 [Escherichia coli KTE232]
gi|431708017|gb|ELJ72542.1| hypothetical protein WGS_00905 [Escherichia coli KTE88]
gi|431710626|gb|ELJ74999.1| hypothetical protein WGO_01018 [Escherichia coli KTE85]
gi|431724322|gb|ELJ88247.1| hypothetical protein WGW_01190 [Escherichia coli KTE94]
gi|431731858|gb|ELJ95319.1| hypothetical protein WI1_00918 [Escherichia coli KTE97]
gi|431735505|gb|ELJ98863.1| hypothetical protein WI3_01081 [Escherichia coli KTE99]
gi|432348880|gb|ELL43323.1| hypothetical protein B185_005340 [Escherichia coli J96]
gi|441609053|emb|CCP95457.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Escherichia coli O10:K5(L):H4 str. ATCC 23506]
gi|441651236|emb|CCQ03211.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Escherichia coli O5:K4(L):H4 str. ATCC 23502]
gi|441715382|emb|CCQ04765.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Escherichia coli Nissle 1917]
gi|444541140|gb|ELV20687.1| regulator of RNase III activity [Escherichia coli 99.0814]
gi|444547245|gb|ELV25871.1| regulator of RNase III activity [Escherichia coli 09BKT078844]
gi|444550290|gb|ELV28391.1| regulator of RNase III activity [Escherichia coli 99.0815]
gi|444562793|gb|ELV39836.1| regulator of RNase III activity [Escherichia coli 99.0839]
gi|444564519|gb|ELV41448.1| regulator of RNase III activity [Escherichia coli 99.0816]
gi|444568658|gb|ELV45313.1| regulator of RNase III activity [Escherichia coli 99.0848]
gi|444579105|gb|ELV55120.1| regulator of RNase III activity [Escherichia coli 99.1753]
gi|444582727|gb|ELV58504.1| regulator of RNase III activity [Escherichia coli 99.1775]
gi|444584272|gb|ELV59921.1| regulator of RNase III activity [Escherichia coli 99.1793]
gi|444597629|gb|ELV72596.1| regulator of RNase III activity [Escherichia coli PA11]
gi|444598784|gb|ELV73697.1| regulator of RNase III activity [Escherichia coli ATCC 700728]
gi|444603307|gb|ELV78016.1| regulator of RNase III activity [Escherichia coli 99.1805]
gi|444611784|gb|ELV86105.1| regulator of RNase III activity [Escherichia coli PA19]
gi|444612055|gb|ELV86362.1| regulator of RNase III activity [Escherichia coli PA13]
gi|444619802|gb|ELV93827.1| regulator of RNase III activity [Escherichia coli PA2]
gi|444629780|gb|ELW03452.1| regulator of RNase III activity [Escherichia coli PA47]
gi|444629969|gb|ELW03636.1| regulator of RNase III activity [Escherichia coli PA48]
gi|444634779|gb|ELW08230.1| regulator of RNase III activity [Escherichia coli PA8]
gi|444645213|gb|ELW18286.1| regulator of RNase III activity [Escherichia coli 7.1982]
gi|444647557|gb|ELW20521.1| regulator of RNase III activity [Escherichia coli 99.1781]
gi|444650692|gb|ELW23517.1| regulator of RNase III activity [Escherichia coli 99.1762]
gi|444660300|gb|ELW32672.1| regulator of RNase III activity [Escherichia coli PA35]
gi|444664984|gb|ELW37136.1| regulator of RNase III activity [Escherichia coli 3.4880]
gi|444670733|gb|ELW42595.1| regulator of RNase III activity [Escherichia coli 95.0083]
gi|444673148|gb|ELW44803.1| regulator of RNase III activity [Escherichia coli 99.0670]
gi|449323514|gb|EMD13469.1| hypothetical protein C201_04661 [Escherichia coli S17]
gi|449323554|gb|EMD13508.1| hypothetical protein A364_06055 [Escherichia coli SEPT362]
Length = 177
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
KT + + +GDI++ VD IV+ N L+ GG AIH AAGP L AC ++ + Q
Sbjct: 2 KTRIHVVQGDITKLAVD----VIVNAANPSLMGGGGVDGAIHRAAGPALLDACLKVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQY 131
CP G A IT LP V+HTVGPV+ ED +L+ AY N L + AN+
Sbjct: 58 G--DCPTGHAVITLAGDLPAKAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVAANSYTS 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 VAFPAISTGV 125
>gi|24112446|ref|NP_706956.1| RNase III inhibitor [Shigella flexneri 2a str. 301]
gi|30062570|ref|NP_836741.1| hypothetical protein S1115 [Shigella flexneri 2a str. 2457T]
gi|110805054|ref|YP_688574.1| hypothetical protein SFV_1057 [Shigella flexneri 5 str. 8401]
gi|384542668|ref|YP_005726730.1| putative polyprotein [Shigella flexneri 2002017]
gi|415853866|ref|ZP_11529756.1| macro domain protein [Shigella flexneri 2a str. 2457T]
gi|417701703|ref|ZP_12350828.1| macro domain protein [Shigella flexneri K-218]
gi|417722299|ref|ZP_12371128.1| macro domain protein [Shigella flexneri K-304]
gi|417728022|ref|ZP_12376746.1| macro domain protein [Shigella flexneri K-671]
gi|417732638|ref|ZP_12381303.1| macro domain protein [Shigella flexneri 2747-71]
gi|417742615|ref|ZP_12391160.1| regulator of RNase III activity [Shigella flexneri 2930-71]
gi|418254848|ref|ZP_12879423.1| regulator of RNase III activity [Shigella flexneri 6603-63]
gi|420340862|ref|ZP_14842374.1| hypothetical protein SFK404_1459 [Shigella flexneri K-404]
gi|420371243|ref|ZP_14871684.1| hypothetical protein SF123566_1672 [Shigella flexneri 1235-66]
gi|424837506|ref|ZP_18262143.1| hypothetical protein SF5M90T_1042 [Shigella flexneri 5a str. M90T]
gi|122957527|sp|Q0T5Z6.1|YMDB_SHIF8 RecName: Full=O-acetyl-ADP-ribose deacetylase; AltName:
Full=Regulator of RNase III activity
gi|24051327|gb|AAN42663.1| putative polyprotein [Shigella flexneri 2a str. 301]
gi|30040816|gb|AAP16547.1| putative polyprotein [Shigella flexneri 2a str. 2457T]
gi|110614602|gb|ABF03269.1| putative polyprotein [Shigella flexneri 5 str. 8401]
gi|281600453|gb|ADA73437.1| putative polyprotein [Shigella flexneri 2002017]
gi|313650698|gb|EFS15099.1| macro domain protein [Shigella flexneri 2a str. 2457T]
gi|332759861|gb|EGJ90162.1| macro domain protein [Shigella flexneri 2747-71]
gi|332760173|gb|EGJ90469.1| macro domain protein [Shigella flexneri K-671]
gi|332767843|gb|EGJ98034.1| regulator of RNase III activity [Shigella flexneri 2930-71]
gi|333005674|gb|EGK25192.1| macro domain protein [Shigella flexneri K-218]
gi|333019683|gb|EGK38959.1| macro domain protein [Shigella flexneri K-304]
gi|383466558|gb|EID61579.1| hypothetical protein SF5M90T_1042 [Shigella flexneri 5a str. M90T]
gi|391271807|gb|EIQ30672.1| hypothetical protein SFK404_1459 [Shigella flexneri K-404]
gi|391319449|gb|EIQ76456.1| hypothetical protein SF123566_1672 [Shigella flexneri 1235-66]
gi|397899774|gb|EJL16145.1| regulator of RNase III activity [Shigella flexneri 6603-63]
Length = 177
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
KT + + +GDI++ VD IV+ N L+ GG AIH AAGP L AC ++ + Q
Sbjct: 2 KTRIHVVQGDITKLAVD----VIVNAANPSLMGGGGVDGAIHRAAGPALLDACLKVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQY 131
CP G A IT LP V+HTVGPV+ ED +L+ AY N L + AN+
Sbjct: 58 G--DCPTGHAVITLAGDLPAKAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVAANSYTS 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 VAFPAISTGV 125
>gi|410669654|ref|YP_006922025.1| Appr-1-p processing domain protein [Methanolobus psychrophilus R15]
gi|409168782|gb|AFV22657.1| Appr-1-p processing domain protein [Methanolobus psychrophilus R15]
Length = 186
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 76/134 (56%), Gaps = 11/134 (8%)
Query: 8 LSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQ 67
+S + ++ + GDI V++ DAIV+ N LL GG AIH+AAGP L + C
Sbjct: 1 MSGKDQCTISVIMGDI----VEQEVDAIVNTANNSLLGGGGVDGAIHKAAGPQLLEECKT 56
Query: 68 IPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDI-LRSAYKNCLSVGKA 126
+ CP GEA+IT G++LP VIHTVGPV+ + E+I L +AY N L +
Sbjct: 57 LG------GCPTGEAKITRGYRLPAKWVIHTVGPVWEGGNSGENIMLENAYMNSLILAAE 110
Query: 127 NNIQYIAFPAISCG 140
+ + IAFP IS G
Sbjct: 111 YDFKSIAFPGISTG 124
>gi|416286863|ref|ZP_11648648.1| hypothetical protein SGB_04303 [Shigella boydii ATCC 9905]
gi|320178523|gb|EFW53488.1| hypothetical protein SGB_04303 [Shigella boydii ATCC 9905]
Length = 177
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
KT + + +GDI++ VD IV+ N L+ GG AIH AAGP L AC ++ + Q
Sbjct: 2 KTRIHVVQGDITKLAVD----VIVNAANPSLMGGGGVDGAIHRAAGPALLDACLKVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQY 131
CP G A IT LP V+HTVGPV+ ED +L+ AY N L + AN+
Sbjct: 58 G--DCPTGHAVITLAGDLPAKAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVAANSYTS 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 VAFPAISTGV 125
>gi|254414094|ref|ZP_05027862.1| Appr-1-p processing enzyme family protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196179230|gb|EDX74226.1| Appr-1-p processing enzyme family protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 601
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 78/139 (56%), Gaps = 11/139 (7%)
Query: 3 FKVQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQ 62
++ Q L + +++ +GDI++ VD AIV+ T+ L G AAIH AAG L+
Sbjct: 426 YRGQNLPDDLRGRIEVIQGDITKQRVD----AIVNATDNYLSGSGGVDAAIHRAAGSGLK 481
Query: 63 KACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCL 121
K C Q+ C GEA+IT G+ LP VIHT GP + ED +L Y+NCL
Sbjct: 482 KECEQLHG------CKTGEAKITRGYNLPARWVIHTAGPAWQGGHQGEDRMLALCYQNCL 535
Query: 122 SVGKANNIQYIAFPAISCG 140
++ + +I+ IAFPAIS G
Sbjct: 536 TLAEQYSIKTIAFPAISTG 554
>gi|422013969|ref|ZP_16360585.1| Appr-1-p processing protein [Providencia burhodogranariea DSM
19968]
gi|414101991|gb|EKT63587.1| Appr-1-p processing protein [Providencia burhodogranariea DSM
19968]
Length = 182
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 75/130 (57%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
+T +++ +GDI++ VD AIV+ N LL GG AIH + G + C QI Q
Sbjct: 11 QTRIELQRGDITKVEVD----AIVNAANSSLLGGGGVDGAIHRSGGAAILDECRQIRARQ 66
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
C PG+A IT G KLP +VIHTVGPV+ + E +IL+ AY + L + N ++
Sbjct: 67 GG--CHPGDAVITTGGKLPAKYVIHTVGPVWQDGAHNETEILKKAYLSSLKLASQNQVET 124
Query: 132 IAFPAISCGV 141
IAFP IS G+
Sbjct: 125 IAFPNISTGI 134
>gi|374313423|ref|YP_005059853.1| Appr-1-p processing protein [Granulicella mallensis MP5ACTX8]
gi|358755433|gb|AEU38823.1| Appr-1-p processing domain protein [Granulicella mallensis
MP5ACTX8]
Length = 172
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 74/129 (57%), Gaps = 11/129 (8%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
LK+ +GDI+R V+ AIV+ N LL GG AIH AAG +L +AC ++
Sbjct: 2 AELKVVRGDIARLQVE----AIVNAANSSLLGGGGVDGAIHRAAGTELVEACRKLHG--- 54
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
C G+A+ TPGF+LP + H VGPV+N E + L S Y+ CL + + ++ +
Sbjct: 55 ---CKTGDAKATPGFRLPARWIFHAVGPVWNGGEREEPEKLASCYRRCLELAREKGVKTM 111
Query: 133 AFPAISCGV 141
AFPA+S G+
Sbjct: 112 AFPAVSTGI 120
>gi|300935184|ref|ZP_07150210.1| RNase III regulator YmdB [Escherichia coli MS 21-1]
gi|432679518|ref|ZP_19914912.1| hypothetical protein A1YW_01275 [Escherichia coli KTE143]
gi|300459578|gb|EFK23071.1| RNase III regulator YmdB [Escherichia coli MS 21-1]
gi|431223710|gb|ELF20956.1| hypothetical protein A1YW_01275 [Escherichia coli KTE143]
Length = 177
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
KT + + +GDI++ VD IV+ N L+ GG AIH AAGP L AC ++ + Q
Sbjct: 2 KTRIHVVQGDITKLVVD----VIVNAANPSLMGGGGVDGAIHRAAGPALLDACLKVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQY 131
CP G A IT LP V+HTVGPV+ ED +L+ AY N L + AN+
Sbjct: 58 G--DCPTGHAVITLAGDLPAKAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVAANSYTS 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 VAFPAISTGV 125
>gi|420335332|ref|ZP_14836943.1| hypothetical protein SFK315_1091 [Shigella flexneri K-315]
gi|391266017|gb|EIQ24980.1| hypothetical protein SFK315_1091 [Shigella flexneri K-315]
Length = 177
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
KT + + +GDI++ VD IV+ N L+ GG AIH AAGP L AC ++ + Q
Sbjct: 2 KTRIHVVQGDITKLAVD----VIVNAANPSLMGGGGVDGAIHRAAGPALLDACLKVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQY 131
CP G A IT LP V+HTVGPV+ ED +L+ AY N L + AN+
Sbjct: 58 G--DCPTGHAVITLAGDLPAKAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVAANSYTS 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 VAFPAISTGV 125
>gi|302520826|ref|ZP_07273168.1| appr-1-p processing domain-containing protein [Streptomyces sp.
SPB78]
gi|318062360|ref|ZP_07981081.1| Appr-1-p processing domain-containing protein [Streptomyces sp.
SA3_actG]
gi|318078360|ref|ZP_07985692.1| Appr-1-p processing domain-containing protein [Streptomyces sp.
SA3_actF]
gi|302429721|gb|EFL01537.1| appr-1-p processing domain-containing protein [Streptomyces sp.
SPB78]
Length = 174
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 80/138 (57%), Gaps = 14/138 (10%)
Query: 8 LSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQ 67
+S + + +L + +GD++R VD A+V+ N L GG A+H AAGP+L +A
Sbjct: 1 MSDTERPNLTVVRGDLTRQDVD----ALVNAANSSLQGGGGVDGALHRAAGPELARAGRD 56
Query: 68 IPEAQPRVRCPPGEARITPGFKL--PVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVG 124
+ C PG+A+ TP F+L PV HVIHTVGPV+ N E + L S Y+ CL V
Sbjct: 57 LAP------CRPGDAKATPAFRLSPPVRHVIHTVGPVWRGGGNGERETLASCYRRCLEVA 110
Query: 125 -KANNIQYIAFPAISCGV 141
+ ++ +AFP+IS G+
Sbjct: 111 DELGDVTSLAFPSISTGI 128
>gi|419915236|ref|ZP_14433604.1| hypothetical protein ECKD1_18680 [Escherichia coli KD1]
gi|425299459|ref|ZP_18689475.1| RNase III regulator YmdB [Escherichia coli 07798]
gi|388384424|gb|EIL46157.1| hypothetical protein ECKD1_18680 [Escherichia coli KD1]
gi|408220133|gb|EKI44208.1| RNase III regulator YmdB [Escherichia coli 07798]
Length = 177
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
KT + + +GDI++ VD IV+ N L+ GG AIH AAGP L AC ++ + Q
Sbjct: 2 KTRIHVVQGDITKLAVD----VIVNAANPSLMGGGGVDGAIHHAAGPALLDACLKVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQY 131
CP G A IT LP V+HTVGPV+ ED +L+ AY N L + AN+
Sbjct: 58 G--DCPTGHAVITLAGDLPAKAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVAANSYTS 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 VAFPAISTGV 125
>gi|340708878|ref|XP_003393045.1| PREDICTED: MACRO domain-containing protein 2-like isoform 3 [Bombus
terrestris]
Length = 271
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 71/122 (58%), Gaps = 13/122 (10%)
Query: 23 ISRWCVDRSS---DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPP 79
IS W D +S DAIV+ N LL GG AIH+AAGP+L+K C + C
Sbjct: 106 ISIWQGDITSLEIDAIVNAANSSLLGGGGVDGAIHKAAGPNLKKECATLG------GCRV 159
Query: 80 GEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISC 139
GEA+IT + LP HVIHTVGP PE L+ Y+N L+V +AN ++ IAFP IS
Sbjct: 160 GEAKITGAYMLPAKHVIHTVGPQGE---KPEK-LKECYENSLTVARANELRTIAFPCIST 215
Query: 140 GV 141
G+
Sbjct: 216 GI 217
>gi|432583077|ref|ZP_19819486.1| hypothetical protein A1SM_02302 [Escherichia coli KTE57]
gi|431119176|gb|ELE22190.1| hypothetical protein A1SM_02302 [Escherichia coli KTE57]
Length = 177
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
KT + + +GDI++ VD IV+ N L+ GG AIH AAGP L AC ++ + Q
Sbjct: 2 KTRIHVVQGDITKLTVD----VIVNAANPSLMGGGGVDGAIHRAAGPALLDACLKVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQY 131
CP G A IT LP V+HTVGPV+ ED +L+ AY N L + AN+
Sbjct: 58 G--DCPTGHAVITLAGDLPAKAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVAANSYTS 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 VAFPAISTGV 125
>gi|164686201|ref|ZP_02210231.1| hypothetical protein CLOBAR_02639 [Clostridium bartlettii DSM
16795]
gi|164601803|gb|EDQ95268.1| macro domain protein [Clostridium bartlettii DSM 16795]
Length = 182
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 75/128 (58%), Gaps = 11/128 (8%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
++I KGDI++ +D AIV+ N+ LL GG AIH AG +L + C +
Sbjct: 10 KIEIVKGDITKLKLD----AIVNAANKSLLGGGGVDGAIHRTAGRELLEECKTLH----- 60
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIA 133
C G+A+IT G+ LP +VIHTVGP++ + ED +L S Y+ L V NN++ IA
Sbjct: 61 -GCETGDAKITKGYNLPAKYVIHTVGPIYKGGNSNEDRLLYSCYERSLEVLIENNLRTIA 119
Query: 134 FPAISCGV 141
FPAIS G+
Sbjct: 120 FPAISTGI 127
>gi|191166924|ref|ZP_03028748.1| appr-1-p processing enzyme domain protein [Escherichia coli B7A]
gi|193064553|ref|ZP_03045633.1| appr-1-p processing enzyme domain protein [Escherichia coli E22]
gi|194428417|ref|ZP_03060957.1| appr-1-p processing enzyme domain protein [Escherichia coli B171]
gi|209918299|ref|YP_002292383.1| hypothetical protein ECSE_1108 [Escherichia coli SE11]
gi|218694579|ref|YP_002402246.1| hypothetical protein EC55989_1158 [Escherichia coli 55989]
gi|260843286|ref|YP_003221064.1| hypothetical protein ECO103_1091 [Escherichia coli O103:H2 str.
12009]
gi|260854529|ref|YP_003228420.1| hypothetical protein ECO26_1379 [Escherichia coli O26:H11 str.
11368]
gi|260867409|ref|YP_003233811.1| hypothetical protein ECO111_1323 [Escherichia coli O111:H- str.
11128]
gi|300821177|ref|ZP_07101326.1| RNase III regulator YmdB [Escherichia coli MS 119-7]
gi|300902433|ref|ZP_07120415.1| RNase III regulator YmdB [Escherichia coli MS 84-1]
gi|300922567|ref|ZP_07138668.1| RNase III regulator YmdB [Escherichia coli MS 182-1]
gi|301305020|ref|ZP_07211122.1| RNase III regulator YmdB [Escherichia coli MS 124-1]
gi|301328588|ref|ZP_07221649.1| RNase III regulator YmdB [Escherichia coli MS 78-1]
gi|307310176|ref|ZP_07589826.1| Appr-1-p processing domain protein [Escherichia coli W]
gi|309794967|ref|ZP_07689387.1| RNase III regulator YmdB [Escherichia coli MS 145-7]
gi|331676834|ref|ZP_08377530.1| RNase III regulator YmdB [Escherichia coli H591]
gi|332279768|ref|ZP_08392181.1| conserved hypothetical protein [Shigella sp. D9]
gi|378713554|ref|YP_005278447.1| Appr-1-p processing protein [Escherichia coli KO11FL]
gi|386608407|ref|YP_006123893.1| appr-1-p processing domain-containing protein [Escherichia coli W]
gi|386701982|ref|YP_006165819.1| RNase III inhibitor [Escherichia coli KO11FL]
gi|386708855|ref|YP_006172576.1| RNase III inhibitor [Escherichia coli W]
gi|407468674|ref|YP_006784884.1| RNase III inhibitor [Escherichia coli O104:H4 str. 2009EL-2071]
gi|407482596|ref|YP_006779745.1| RNase III inhibitor [Escherichia coli O104:H4 str. 2011C-3493]
gi|410483148|ref|YP_006770694.1| RNase III inhibitor [Escherichia coli O104:H4 str. 2009EL-2050]
gi|415782800|ref|ZP_11491749.1| macro domain protein [Escherichia coli EPECa14]
gi|415794509|ref|ZP_11496422.1| macro domain protein [Escherichia coli E128010]
gi|415824348|ref|ZP_11512637.1| macro domain protein [Escherichia coli OK1180]
gi|415865718|ref|ZP_11538487.1| RNase III regulator YmdB [Escherichia coli MS 85-1]
gi|416342547|ref|ZP_11676711.1| hypothetical protein ECoL_01645 [Escherichia coli EC4100B]
gi|417150193|ref|ZP_11990083.1| macro domain protein [Escherichia coli 1.2264]
gi|417154752|ref|ZP_11992881.1| macro domain protein [Escherichia coli 96.0497]
gi|417171540|ref|ZP_12001868.1| macro domain protein [Escherichia coli 3.2608]
gi|417180359|ref|ZP_12008067.1| macro domain protein [Escherichia coli 93.0624]
gi|417192975|ref|ZP_12014822.1| macro domain protein [Escherichia coli 4.0522]
gi|417204205|ref|ZP_12018663.1| macro domain protein [Escherichia coli JB1-95]
gi|417254316|ref|ZP_12046070.1| macro domain protein [Escherichia coli 4.0967]
gi|417299087|ref|ZP_12086321.1| macro domain protein [Escherichia coli 900105 (10e)]
gi|417580326|ref|ZP_12231142.1| macro domain protein [Escherichia coli STEC_B2F1]
gi|417590912|ref|ZP_12241625.1| macro domain protein [Escherichia coli 2534-86]
gi|417596106|ref|ZP_12246763.1| macro domain protein [Escherichia coli 3030-1]
gi|417607404|ref|ZP_12257916.1| macro domain protein [Escherichia coli STEC_DG131-3]
gi|417622574|ref|ZP_12272891.1| macro domain protein [Escherichia coli STEC_H.1.8]
gi|417638386|ref|ZP_12288551.1| macro domain protein [Escherichia coli TX1999]
gi|417666319|ref|ZP_12315874.1| macro domain protein [Escherichia coli STEC_O31]
gi|417804500|ref|ZP_12451503.1| RNase III inhibitor [Escherichia coli O104:H4 str. LB226692]
gi|417832242|ref|ZP_12478731.1| RNase III inhibitor [Escherichia coli O104:H4 str. 01-09591]
gi|417865027|ref|ZP_12510072.1| hypothetical protein C22711_1959 [Escherichia coli O104:H4 str.
C227-11]
gi|418043231|ref|ZP_12681402.1| Appr-1-p processing domain protein [Escherichia coli W26]
gi|418941344|ref|ZP_13494675.1| RNase III inhibitor [Escherichia coli O157:H43 str. T22]
gi|419169039|ref|ZP_13713433.1| hypothetical protein ECDEC7A_1190 [Escherichia coli DEC7A]
gi|419180017|ref|ZP_13723640.1| regulator of RNase III activity [Escherichia coli DEC7C]
gi|419185579|ref|ZP_13729101.1| regulator of RNase III activity [Escherichia coli DEC7D]
gi|419190849|ref|ZP_13734315.1| hypothetical protein ECDEC7E_1128 [Escherichia coli DEC7E]
gi|419196235|ref|ZP_13739637.1| hypothetical protein ECDEC8A_1338 [Escherichia coli DEC8A]
gi|419202384|ref|ZP_13745599.1| regulator of RNase III activity [Escherichia coli DEC8B]
gi|419208534|ref|ZP_13751649.1| regulator of RNase III activity [Escherichia coli DEC8C]
gi|419214818|ref|ZP_13757838.1| regulator of RNase III activity [Escherichia coli DEC8D]
gi|419220518|ref|ZP_13763466.1| regulator of RNase III activity [Escherichia coli DEC8E]
gi|419225917|ref|ZP_13768795.1| regulator of RNase III activity [Escherichia coli DEC9A]
gi|419231634|ref|ZP_13774422.1| regulator of RNase III activity [Escherichia coli DEC9B]
gi|419237017|ref|ZP_13779760.1| regulator of RNase III activity [Escherichia coli DEC9C]
gi|419242553|ref|ZP_13785200.1| regulator of RNase III activity [Escherichia coli DEC9D]
gi|419248076|ref|ZP_13790683.1| regulator of RNase III activity [Escherichia coli DEC9E]
gi|419254004|ref|ZP_13796536.1| regulator of RNase III activity [Escherichia coli DEC10A]
gi|419260113|ref|ZP_13802551.1| regulator of RNase III activity [Escherichia coli DEC10B]
gi|419266133|ref|ZP_13808508.1| regulator of RNase III activity [Escherichia coli DEC10C]
gi|419271754|ref|ZP_13814069.1| regulator of RNase III activity [Escherichia coli DEC10D]
gi|419277327|ref|ZP_13819588.1| regulator of RNase III activity [Escherichia coli DEC10E]
gi|419283203|ref|ZP_13825405.1| regulator of RNase III activity [Escherichia coli DEC10F]
gi|419288756|ref|ZP_13830860.1| regulator of RNase III activity [Escherichia coli DEC11A]
gi|419293995|ref|ZP_13836047.1| regulator of RNase III activity [Escherichia coli DEC11B]
gi|419299448|ref|ZP_13841458.1| hypothetical protein ECDEC11C_1326 [Escherichia coli DEC11C]
gi|419305664|ref|ZP_13847573.1| hypothetical protein ECDEC11D_1229 [Escherichia coli DEC11D]
gi|419310681|ref|ZP_13852552.1| hypothetical protein ECDEC11E_1208 [Escherichia coli DEC11E]
gi|419315988|ref|ZP_13857810.1| hypothetical protein ECDEC12A_1290 [Escherichia coli DEC12A]
gi|419322005|ref|ZP_13863732.1| regulator of RNase III activity [Escherichia coli DEC12B]
gi|419328082|ref|ZP_13869709.1| hypothetical protein ECDEC12C_1291 [Escherichia coli DEC12C]
gi|419338938|ref|ZP_13880422.1| regulator of RNase III activity [Escherichia coli DEC12E]
gi|419344675|ref|ZP_13886057.1| regulator of RNase III activity [Escherichia coli DEC13A]
gi|419349114|ref|ZP_13890467.1| regulator of RNase III activity [Escherichia coli DEC13B]
gi|419354215|ref|ZP_13895491.1| regulator of RNase III activity [Escherichia coli DEC13C]
gi|419359500|ref|ZP_13900725.1| regulator of RNase III activity [Escherichia coli DEC13D]
gi|419364699|ref|ZP_13905871.1| regulator of RNase III activity [Escherichia coli DEC13E]
gi|419380115|ref|ZP_13921082.1| regulator of RNase III activity [Escherichia coli DEC14C]
gi|419385459|ref|ZP_13926347.1| regulator of RNase III activity [Escherichia coli DEC14D]
gi|419390624|ref|ZP_13931452.1| regulator of RNase III activity [Escherichia coli DEC15A]
gi|419395844|ref|ZP_13936623.1| regulator of RNase III activity [Escherichia coli DEC15B]
gi|419401221|ref|ZP_13941948.1| regulator of RNase III activity [Escherichia coli DEC15C]
gi|419406345|ref|ZP_13947040.1| regulator of RNase III activity [Escherichia coli DEC15D]
gi|419411911|ref|ZP_13952574.1| regulator of RNase III activity [Escherichia coli DEC15E]
gi|419806654|ref|ZP_14331752.1| Appr-1-p processing domain protein [Escherichia coli AI27]
gi|419868645|ref|ZP_14390904.1| RNase III inhibitor [Escherichia coli O103:H2 str. CVM9450]
gi|419879203|ref|ZP_14400647.1| RNase III inhibitor [Escherichia coli O111:H11 str. CVM9534]
gi|419885085|ref|ZP_14405906.1| RNase III inhibitor [Escherichia coli O111:H11 str. CVM9545]
gi|419886652|ref|ZP_14407286.1| RNase III inhibitor [Escherichia coli O111:H8 str. CVM9570]
gi|419894217|ref|ZP_14414146.1| RNase III inhibitor [Escherichia coli O111:H8 str. CVM9574]
gi|419900832|ref|ZP_14420246.1| RNase III inhibitor [Escherichia coli O26:H11 str. CVM9942]
gi|419905835|ref|ZP_14424780.1| Appr-1-p processing protein [Escherichia coli O26:H11 str.
CVM10026]
gi|420090287|ref|ZP_14602059.1| RNase III inhibitor [Escherichia coli O111:H8 str. CVM9602]
gi|420093958|ref|ZP_14605582.1| RNase III inhibitor [Escherichia coli O111:H8 str. CVM9634]
gi|420103670|ref|ZP_14614495.1| RNase III inhibitor [Escherichia coli O111:H11 str. CVM9455]
gi|420111977|ref|ZP_14621790.1| RNase III inhibitor [Escherichia coli O111:H11 str. CVM9553]
gi|420117397|ref|ZP_14626759.1| RNase III inhibitor [Escherichia coli O26:H11 str. CVM10021]
gi|420122833|ref|ZP_14631737.1| RNase III inhibitor [Escherichia coli O26:H11 str. CVM10030]
gi|420128410|ref|ZP_14636967.1| RNase III inhibitor [Escherichia coli O26:H11 str. CVM10224]
gi|420131045|ref|ZP_14639514.1| RNase III inhibitor [Escherichia coli O26:H11 str. CVM9952]
gi|420384808|ref|ZP_14884180.1| hypothetical protein ECEPECA12_1173 [Escherichia coli EPECa12]
gi|420390649|ref|ZP_14889913.1| regulator of RNase III activity [Escherichia coli EPEC C342-62]
gi|422354604|ref|ZP_16435339.1| RNase III regulator YmdB [Escherichia coli MS 117-3]
gi|422775102|ref|ZP_16828758.1| macro domain-containing protein [Escherichia coli H120]
gi|422958770|ref|ZP_16970701.1| UPF0189 protein ymdB [Escherichia coli H494]
gi|422991928|ref|ZP_16982699.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. C227-11]
gi|422993878|ref|ZP_16984642.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. C236-11]
gi|422999057|ref|ZP_16989813.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 09-7901]
gi|423002656|ref|ZP_16993402.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 04-8351]
gi|423009192|ref|ZP_16999930.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 11-3677]
gi|423023384|ref|ZP_17014087.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 11-4404]
gi|423028532|ref|ZP_17019225.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 11-4522]
gi|423029398|ref|ZP_17020086.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 11-4623]
gi|423037237|ref|ZP_17027911.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 11-4632 C1]
gi|423042352|ref|ZP_17033019.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 11-4632 C2]
gi|423049043|ref|ZP_17039700.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 11-4632 C3]
gi|423052624|ref|ZP_17041432.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 11-4632 C4]
gi|423059592|ref|ZP_17048388.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 11-4632 C5]
gi|424749208|ref|ZP_18177322.1| RNase III inhibitor [Escherichia coli O26:H11 str. CFSAN001629]
gi|424755274|ref|ZP_18183157.1| RNase III inhibitor [Escherichia coli O111:H11 str. CFSAN001630]
gi|424767869|ref|ZP_18195177.1| RNase III inhibitor [Escherichia coli O111:H8 str. CFSAN001632]
gi|425378281|ref|ZP_18762573.1| RNase III regulator YmdB [Escherichia coli EC1865]
gi|425421718|ref|ZP_18802911.1| RNase III regulator YmdB [Escherichia coli 0.1288]
gi|427804201|ref|ZP_18971268.1| putative polyprotein [Escherichia coli chi7122]
gi|427808782|ref|ZP_18975847.1| putative polyprotein [Escherichia coli]
gi|429723441|ref|ZP_19258323.1| hypothetical protein MO3_01500 [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429723785|ref|ZP_19258660.1| hypothetical protein MO5_04293 [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429773520|ref|ZP_19305533.1| hypothetical protein C212_00084 [Escherichia coli O104:H4 str.
11-02030]
gi|429776510|ref|ZP_19308490.1| hypothetical protein C213_00082 [Escherichia coli O104:H4 str.
11-02033-1]
gi|429781734|ref|ZP_19313661.1| hypothetical protein C214_00083 [Escherichia coli O104:H4 str.
11-02092]
gi|429786928|ref|ZP_19318819.1| hypothetical protein C215_00082 [Escherichia coli O104:H4 str.
11-02093]
gi|429792107|ref|ZP_19323959.1| hypothetical protein C216_00083 [Escherichia coli O104:H4 str.
11-02281]
gi|429797320|ref|ZP_19329125.1| hypothetical protein C217_00083 [Escherichia coli O104:H4 str.
11-02318]
gi|429802525|ref|ZP_19334286.1| hypothetical protein C218_00082 [Escherichia coli O104:H4 str.
11-02913]
gi|429808896|ref|ZP_19340608.1| hypothetical protein C219_00084 [Escherichia coli O104:H4 str.
11-03439]
gi|429812948|ref|ZP_19344628.1| hypothetical protein C220_00083 [Escherichia coli O104:H4 str.
11-04080]
gi|429818154|ref|ZP_19349790.1| hypothetical protein C221_00082 [Escherichia coli O104:H4 str.
11-03943]
gi|429911982|ref|ZP_19377938.1| hypothetical protein MO7_02416 [Escherichia coli O104:H4 str.
Ec11-9941]
gi|429917824|ref|ZP_19383764.1| hypothetical protein O7C_04798 [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429922862|ref|ZP_19388783.1| hypothetical protein O7E_04800 [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429923713|ref|ZP_19389629.1| hypothetical protein O7G_00568 [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429932606|ref|ZP_19398500.1| hypothetical protein O7I_04481 [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429934209|ref|ZP_19400099.1| hypothetical protein O7K_01017 [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429939871|ref|ZP_19405745.1| hypothetical protein O7M_01567 [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429947510|ref|ZP_19413365.1| hypothetical protein O7O_04106 [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429950143|ref|ZP_19415991.1| hypothetical protein S7Y_01558 [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429958416|ref|ZP_19424245.1| hypothetical protein S91_04884 [Escherichia coli O104:H4 str.
Ec12-0466]
gi|432480471|ref|ZP_19722432.1| hypothetical protein A15U_01586 [Escherichia coli KTE210]
gi|432749522|ref|ZP_19984134.1| hypothetical protein WEQ_00937 [Escherichia coli KTE29]
gi|432764412|ref|ZP_19998857.1| hypothetical protein A1S5_01972 [Escherichia coli KTE48]
gi|432813148|ref|ZP_20046993.1| hypothetical protein A1WM_04332 [Escherichia coli KTE101]
gi|432831018|ref|ZP_20064600.1| hypothetical protein A1YM_02810 [Escherichia coli KTE135]
gi|433134222|ref|ZP_20319590.1| hypothetical protein WKI_01166 [Escherichia coli KTE166]
gi|443617158|ref|YP_007381014.1| RNase III inhibitor [Escherichia coli APEC O78]
gi|450213239|ref|ZP_21894773.1| RNase III inhibitor [Escherichia coli O08]
gi|190903036|gb|EDV62761.1| appr-1-p processing enzyme domain protein [Escherichia coli B7A]
gi|192927805|gb|EDV82419.1| appr-1-p processing enzyme domain protein [Escherichia coli E22]
gi|194413469|gb|EDX29751.1| appr-1-p processing enzyme domain protein [Escherichia coli B171]
gi|209911558|dbj|BAG76632.1| conserved hypothetical protein [Escherichia coli SE11]
gi|218351311|emb|CAU97017.1| conserved hypothetical protein [Escherichia coli 55989]
gi|257753178|dbj|BAI24680.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368]
gi|257758433|dbj|BAI29930.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009]
gi|257763765|dbj|BAI35260.1| conserved predicted protein [Escherichia coli O111:H- str. 11128]
gi|300405465|gb|EFJ89003.1| RNase III regulator YmdB [Escherichia coli MS 84-1]
gi|300421113|gb|EFK04424.1| RNase III regulator YmdB [Escherichia coli MS 182-1]
gi|300526476|gb|EFK47545.1| RNase III regulator YmdB [Escherichia coli MS 119-7]
gi|300839738|gb|EFK67498.1| RNase III regulator YmdB [Escherichia coli MS 124-1]
gi|300844980|gb|EFK72740.1| RNase III regulator YmdB [Escherichia coli MS 78-1]
gi|306909894|gb|EFN40388.1| Appr-1-p processing domain protein [Escherichia coli W]
gi|308121271|gb|EFO58533.1| RNase III regulator YmdB [Escherichia coli MS 145-7]
gi|315060324|gb|ADT74651.1| appr-1-p processing domain-containing protein [Escherichia coli W]
gi|315253843|gb|EFU33811.1| RNase III regulator YmdB [Escherichia coli MS 85-1]
gi|320200938|gb|EFW75522.1| hypothetical protein ECoL_01645 [Escherichia coli EC4100B]
gi|323156850|gb|EFZ42984.1| macro domain protein [Escherichia coli EPECa14]
gi|323163725|gb|EFZ49544.1| macro domain protein [Escherichia coli E128010]
gi|323175726|gb|EFZ61320.1| macro domain protein [Escherichia coli OK1180]
gi|323379115|gb|ADX51383.1| Appr-1-p processing domain protein [Escherichia coli KO11FL]
gi|323947343|gb|EGB43349.1| macro domain-containing protein [Escherichia coli H120]
gi|324017453|gb|EGB86672.1| RNase III regulator YmdB [Escherichia coli MS 117-3]
gi|331075523|gb|EGI46821.1| RNase III regulator YmdB [Escherichia coli H591]
gi|332102120|gb|EGJ05466.1| conserved hypothetical protein [Shigella sp. D9]
gi|340735017|gb|EGR64106.1| RNase III inhibitor [Escherichia coli O104:H4 str. 01-09591]
gi|340740742|gb|EGR74920.1| RNase III inhibitor [Escherichia coli O104:H4 str. LB226692]
gi|341918316|gb|EGT67930.1| hypothetical protein C22711_1959 [Escherichia coli O104:H4 str.
C227-11]
gi|345341985|gb|EGW74383.1| macro domain protein [Escherichia coli STEC_B2F1]
gi|345343842|gb|EGW76220.1| macro domain protein [Escherichia coli 2534-86]
gi|345357735|gb|EGW89925.1| macro domain protein [Escherichia coli 3030-1]
gi|345361450|gb|EGW93609.1| macro domain protein [Escherichia coli STEC_DG131-3]
gi|345383760|gb|EGX13631.1| macro domain protein [Escherichia coli STEC_H.1.8]
gi|345394883|gb|EGX24637.1| macro domain protein [Escherichia coli TX1999]
gi|354857161|gb|EHF17617.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. C227-11]
gi|354864953|gb|EHF25382.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. C236-11]
gi|354871732|gb|EHF32129.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 04-8351]
gi|354875234|gb|EHF35600.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 09-7901]
gi|354877482|gb|EHF37841.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 11-4404]
gi|354882306|gb|EHF42630.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 11-4522]
gi|354883014|gb|EHF43336.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 11-3677]
gi|354899315|gb|EHF59464.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 11-4632 C1]
gi|354901138|gb|EHF61266.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 11-4623]
gi|354902792|gb|EHF62905.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 11-4632 C2]
gi|354904985|gb|EHF65070.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 11-4632 C3]
gi|354916212|gb|EHF76186.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 11-4632 C5]
gi|354921375|gb|EHF81300.1| UPF0189 protein ymdB [Escherichia coli O104:H4 str. 11-4632 C4]
gi|371596599|gb|EHN85437.1| UPF0189 protein ymdB [Escherichia coli H494]
gi|375323310|gb|EHS69024.1| RNase III inhibitor [Escherichia coli O157:H43 str. T22]
gi|378018257|gb|EHV81124.1| hypothetical protein ECDEC7A_1190 [Escherichia coli DEC7A]
gi|378027202|gb|EHV89834.1| regulator of RNase III activity [Escherichia coli DEC7C]
gi|378032997|gb|EHV95578.1| regulator of RNase III activity [Escherichia coli DEC7D]
gi|378040912|gb|EHW03375.1| hypothetical protein ECDEC7E_1128 [Escherichia coli DEC7E]
gi|378050937|gb|EHW13259.1| hypothetical protein ECDEC8A_1338 [Escherichia coli DEC8A]
gi|378054320|gb|EHW16599.1| regulator of RNase III activity [Escherichia coli DEC8B]
gi|378058907|gb|EHW21113.1| regulator of RNase III activity [Escherichia coli DEC8C]
gi|378066202|gb|EHW28339.1| regulator of RNase III activity [Escherichia coli DEC8D]
gi|378070652|gb|EHW32730.1| regulator of RNase III activity [Escherichia coli DEC8E]
gi|378079217|gb|EHW41195.1| regulator of RNase III activity [Escherichia coli DEC9A]
gi|378081352|gb|EHW43307.1| regulator of RNase III activity [Escherichia coli DEC9B]
gi|378087880|gb|EHW49736.1| regulator of RNase III activity [Escherichia coli DEC9C]
gi|378093904|gb|EHW55708.1| regulator of RNase III activity [Escherichia coli DEC9D]
gi|378100241|gb|EHW61938.1| regulator of RNase III activity [Escherichia coli DEC9E]
gi|378104154|gb|EHW65815.1| regulator of RNase III activity [Escherichia coli DEC10A]
gi|378111758|gb|EHW73341.1| regulator of RNase III activity [Escherichia coli DEC10B]
gi|378115855|gb|EHW77389.1| regulator of RNase III activity [Escherichia coli DEC10C]
gi|378120523|gb|EHW81996.1| regulator of RNase III activity [Escherichia coli DEC10D]
gi|378132496|gb|EHW93848.1| regulator of RNase III activity [Escherichia coli DEC10E]
gi|378134212|gb|EHW95541.1| regulator of RNase III activity [Escherichia coli DEC11A]
gi|378136752|gb|EHW98039.1| regulator of RNase III activity [Escherichia coli DEC10F]
gi|378144099|gb|EHX05274.1| regulator of RNase III activity [Escherichia coli DEC11B]
gi|378151613|gb|EHX12721.1| hypothetical protein ECDEC11D_1229 [Escherichia coli DEC11D]
gi|378154664|gb|EHX15737.1| hypothetical protein ECDEC11C_1326 [Escherichia coli DEC11C]
gi|378160396|gb|EHX21393.1| hypothetical protein ECDEC11E_1208 [Escherichia coli DEC11E]
gi|378172154|gb|EHX33013.1| regulator of RNase III activity [Escherichia coli DEC12B]
gi|378173374|gb|EHX34214.1| hypothetical protein ECDEC12A_1290 [Escherichia coli DEC12A]
gi|378174860|gb|EHX35682.1| hypothetical protein ECDEC12C_1291 [Escherichia coli DEC12C]
gi|378189103|gb|EHX49697.1| regulator of RNase III activity [Escherichia coli DEC13A]
gi|378192942|gb|EHX53488.1| regulator of RNase III activity [Escherichia coli DEC12E]
gi|378204776|gb|EHX65192.1| regulator of RNase III activity [Escherichia coli DEC13B]
gi|378206608|gb|EHX67011.1| regulator of RNase III activity [Escherichia coli DEC13C]
gi|378206959|gb|EHX67361.1| regulator of RNase III activity [Escherichia coli DEC13D]
gi|378216520|gb|EHX76807.1| regulator of RNase III activity [Escherichia coli DEC13E]
gi|378231010|gb|EHX91122.1| regulator of RNase III activity [Escherichia coli DEC14C]
gi|378234908|gb|EHX94984.1| regulator of RNase III activity [Escherichia coli DEC14D]
gi|378241037|gb|EHY01005.1| regulator of RNase III activity [Escherichia coli DEC15A]
gi|378248182|gb|EHY08096.1| regulator of RNase III activity [Escherichia coli DEC15B]
gi|378248875|gb|EHY08785.1| regulator of RNase III activity [Escherichia coli DEC15C]
gi|378256518|gb|EHY16368.1| regulator of RNase III activity [Escherichia coli DEC15D]
gi|378260099|gb|EHY19904.1| regulator of RNase III activity [Escherichia coli DEC15E]
gi|383393509|gb|AFH18467.1| RNase III inhibitor [Escherichia coli KO11FL]
gi|383404547|gb|AFH10790.1| RNase III inhibitor [Escherichia coli W]
gi|383473807|gb|EID65815.1| Appr-1-p processing domain protein [Escherichia coli W26]
gi|384470340|gb|EIE54453.1| Appr-1-p processing domain protein [Escherichia coli AI27]
gi|386160786|gb|EIH22592.1| macro domain protein [Escherichia coli 1.2264]
gi|386167841|gb|EIH34357.1| macro domain protein [Escherichia coli 96.0497]
gi|386180810|gb|EIH58281.1| macro domain protein [Escherichia coli 3.2608]
gi|386185714|gb|EIH68440.1| macro domain protein [Escherichia coli 93.0624]
gi|386190156|gb|EIH78904.1| macro domain protein [Escherichia coli 4.0522]
gi|386198421|gb|EIH92597.1| macro domain protein [Escherichia coli JB1-95]
gi|386215260|gb|EII31754.1| macro domain protein [Escherichia coli 4.0967]
gi|386257481|gb|EIJ12968.1| macro domain protein [Escherichia coli 900105 (10e)]
gi|388332738|gb|EIK99401.1| RNase III inhibitor [Escherichia coli O111:H11 str. CVM9534]
gi|388344220|gb|EIL10087.1| RNase III inhibitor [Escherichia coli O103:H2 str. CVM9450]
gi|388351452|gb|EIL16689.1| RNase III inhibitor [Escherichia coli O111:H11 str. CVM9545]
gi|388364766|gb|EIL28599.1| RNase III inhibitor [Escherichia coli O111:H8 str. CVM9574]
gi|388364917|gb|EIL28733.1| RNase III inhibitor [Escherichia coli O111:H8 str. CVM9570]
gi|388377321|gb|EIL40146.1| RNase III inhibitor [Escherichia coli O26:H11 str. CVM9942]
gi|388380345|gb|EIL42949.1| Appr-1-p processing protein [Escherichia coli O26:H11 str.
CVM10026]
gi|391308146|gb|EIQ65864.1| hypothetical protein ECEPECA12_1173 [Escherichia coli EPECa12]
gi|391313838|gb|EIQ71405.1| regulator of RNase III activity [Escherichia coli EPEC C342-62]
gi|394385681|gb|EJE63204.1| RNase III inhibitor [Escherichia coli O26:H11 str. CVM10224]
gi|394386372|gb|EJE63876.1| RNase III inhibitor [Escherichia coli O111:H8 str. CVM9602]
gi|394397469|gb|EJE73732.1| RNase III inhibitor [Escherichia coli O111:H11 str. CVM9553]
gi|394397800|gb|EJE74035.1| RNase III inhibitor [Escherichia coli O111:H8 str. CVM9634]
gi|394402165|gb|EJE77906.1| RNase III inhibitor [Escherichia coli O26:H11 str. CVM10021]
gi|394406765|gb|EJE81712.1| RNase III inhibitor [Escherichia coli O111:H11 str. CVM9455]
gi|394418166|gb|EJE91866.1| RNase III inhibitor [Escherichia coli O26:H11 str. CVM10030]
gi|394433147|gb|EJF05206.1| RNase III inhibitor [Escherichia coli O26:H11 str. CVM9952]
gi|397785783|gb|EJK96626.1| macro domain protein [Escherichia coli STEC_O31]
gi|406778310|gb|AFS57734.1| RNase III inhibitor [Escherichia coli O104:H4 str. 2009EL-2050]
gi|407054893|gb|AFS74944.1| RNase III inhibitor [Escherichia coli O104:H4 str. 2011C-3493]
gi|407064709|gb|AFS85756.1| RNase III inhibitor [Escherichia coli O104:H4 str. 2009EL-2071]
gi|408304267|gb|EKJ21696.1| RNase III regulator YmdB [Escherichia coli EC1865]
gi|408346409|gb|EKJ60704.1| RNase III regulator YmdB [Escherichia coli 0.1288]
gi|412962383|emb|CCK46297.1| putative polyprotein [Escherichia coli chi7122]
gi|412968961|emb|CCJ43588.1| putative polyprotein [Escherichia coli]
gi|421942805|gb|EKU00123.1| RNase III inhibitor [Escherichia coli O26:H11 str. CFSAN001629]
gi|421947378|gb|EKU04456.1| RNase III inhibitor [Escherichia coli O111:H8 str. CFSAN001632]
gi|421950373|gb|EKU07247.1| RNase III inhibitor [Escherichia coli O111:H11 str. CFSAN001630]
gi|429355317|gb|EKY92007.1| hypothetical protein C212_00084 [Escherichia coli O104:H4 str.
11-02030]
gi|429359229|gb|EKY95894.1| hypothetical protein C214_00083 [Escherichia coli O104:H4 str.
11-02092]
gi|429363130|gb|EKY99773.1| hypothetical protein C213_00082 [Escherichia coli O104:H4 str.
11-02033-1]
gi|429373477|gb|EKZ10021.1| hypothetical protein C215_00082 [Escherichia coli O104:H4 str.
11-02093]
gi|429377218|gb|EKZ13742.1| hypothetical protein C216_00083 [Escherichia coli O104:H4 str.
11-02281]
gi|429378822|gb|EKZ15329.1| hypothetical protein C217_00083 [Escherichia coli O104:H4 str.
11-02318]
gi|429388106|gb|EKZ24532.1| hypothetical protein C219_00084 [Escherichia coli O104:H4 str.
11-03439]
gi|429389969|gb|EKZ26385.1| hypothetical protein C218_00082 [Escherichia coli O104:H4 str.
11-02913]
gi|429393808|gb|EKZ30195.1| hypothetical protein C221_00082 [Escherichia coli O104:H4 str.
11-03943]
gi|429395111|gb|EKZ31479.1| hypothetical protein MO3_01500 [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429403795|gb|EKZ40076.1| hypothetical protein C220_00083 [Escherichia coli O104:H4 str.
11-04080]
gi|429404913|gb|EKZ41180.1| hypothetical protein MO5_04293 [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429408901|gb|EKZ45135.1| hypothetical protein O7C_04798 [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429416976|gb|EKZ53127.1| hypothetical protein O7I_04481 [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429421804|gb|EKZ57925.1| hypothetical protein O7K_01017 [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429423545|gb|EKZ59653.1| hypothetical protein O7G_00568 [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429425616|gb|EKZ61705.1| hypothetical protein O7M_01567 [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429432703|gb|EKZ68740.1| hypothetical protein O7E_04800 [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429442611|gb|EKZ78567.1| hypothetical protein O7O_04106 [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429447515|gb|EKZ83433.1| hypothetical protein S91_04884 [Escherichia coli O104:H4 str.
Ec12-0466]
gi|429452170|gb|EKZ88056.1| hypothetical protein S7Y_01558 [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429454567|gb|EKZ90426.1| hypothetical protein MO7_02416 [Escherichia coli O104:H4 str.
Ec11-9941]
gi|431009418|gb|ELD24038.1| hypothetical protein A15U_01586 [Escherichia coli KTE210]
gi|431298812|gb|ELF88436.1| hypothetical protein WEQ_00937 [Escherichia coli KTE29]
gi|431312255|gb|ELG00259.1| hypothetical protein A1S5_01972 [Escherichia coli KTE48]
gi|431356354|gb|ELG43045.1| hypothetical protein A1WM_04332 [Escherichia coli KTE101]
gi|431379364|gb|ELG64298.1| hypothetical protein A1YM_02810 [Escherichia coli KTE135]
gi|431660709|gb|ELJ27574.1| hypothetical protein WKI_01166 [Escherichia coli KTE166]
gi|443421666|gb|AGC86570.1| RNase III inhibitor [Escherichia coli APEC O78]
gi|449320921|gb|EMD10940.1| RNase III inhibitor [Escherichia coli O08]
Length = 177
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
KT + + +GDI++ VD IV+ N L+ GG AIH AAGP L AC ++ + Q
Sbjct: 2 KTRIHVVQGDITKLAVD----VIVNAANPSLMGGGGVDGAIHRAAGPALLDACLKVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQY 131
CP G A IT LP V+HTVGPV+ ED +L+ AY N L + AN+
Sbjct: 58 G--DCPTGHAVITLAGALPAKAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVAANSYTS 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 VAFPAISTGV 125
>gi|241760442|ref|ZP_04758536.1| appr-1-p processing protein [Neisseria flavescens SK114]
gi|241319111|gb|EER55604.1| appr-1-p processing protein [Neisseria flavescens SK114]
Length = 172
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 73/134 (54%), Gaps = 11/134 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++ +GDI+R VD AIV+ N LL GG AIH AAG +L C +
Sbjct: 4 FEVIEGDITRLAVD----AIVNAANSSLLGGGGVDGAIHRAAGKELLDECRTLGG----- 54
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPV-FNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C GEA+IT G++LP +VIHTVGPV F N E L +Y N L + + +N+ IAF
Sbjct: 55 -CRTGEAKITKGYRLPARYVIHTVGPVWFGGKQNEEAKLAQSYANSLLLAQKHNLHSIAF 113
Query: 135 PAISCGVSQIMTHA 148
P IS GV + A
Sbjct: 114 PCISTGVYRFPAEA 127
>gi|336322461|ref|YP_004602428.1| Appr-1-p processing protein [Flexistipes sinusarabici DSM 4947]
gi|336106042|gb|AEI13860.1| Appr-1-p processing domain protein [Flexistipes sinusarabici DSM
4947]
Length = 176
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 73/128 (57%), Gaps = 11/128 (8%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
+L+ +GDI+ DA+V+ N L+ GG A AIH AAG L + C +P
Sbjct: 8 VTLETVQGDIASQ---EDIDAVVNAANARLMPGGGVAGAIHRAAGRGLAEEC------KP 58
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYI 132
V PG+A IT LP SHVIH +GPV+ PED +LR+ YK L + + NNI+ I
Sbjct: 59 LVPIKPGDAVITGAHNLPNSHVIHCLGPVYGVD-KPEDKLLRNCYKKALDLAEDNNIESI 117
Query: 133 AFPAISCG 140
AFPAIS G
Sbjct: 118 AFPAISTG 125
>gi|420373762|ref|ZP_14873825.1| hypothetical protein SF123566_3830 [Shigella flexneri 1235-66]
gi|391316785|gb|EIQ74170.1| hypothetical protein SF123566_3830 [Shigella flexneri 1235-66]
Length = 180
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 72/129 (55%), Gaps = 7/129 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
++ + + +GDI+ VD IV+ N LL GG AIH AAGP L +AC Q+ + Q
Sbjct: 2 QSRVHVLQGDITAIAVD----VIVNAANSSLLGGGGVDGAIHRAAGPALLEACKQVLQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
CP G A IT LP VIHTVGPV+ + E + L AY+N L + AN Q
Sbjct: 58 G--ECPTGHAVITLAGNLPAKAVIHTVGPVWQGGDHHEAERLEEAYRNSLQLALANGYQS 115
Query: 132 IAFPAISCG 140
IAFPAIS G
Sbjct: 116 IAFPAISTG 124
>gi|336370629|gb|EGN98969.1| hypothetical protein SERLA73DRAFT_108208 [Serpula lacrymans var.
lacrymans S7.3]
gi|336383408|gb|EGO24557.1| hypothetical protein SERLADRAFT_438166 [Serpula lacrymans var.
lacrymans S7.9]
Length = 220
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 72/124 (58%), Gaps = 12/124 (9%)
Query: 20 KGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPP 79
+GDI++ +D AIV+ + LL GG AIH AAGP+L + C + C
Sbjct: 45 QGDITKLEID----AIVNAAKKSLLGGGGVDGAIHRAAGPELLEECRTLN------GCET 94
Query: 80 GEARITPGFKLPVSHVIHTVGPVFNFH--CNPEDILRSAYKNCLSVGKANNIQYIAFPAI 137
G+A+IT G+ LP HVIHTVGPV++ D L S Y+ + + NN+++IAFP+I
Sbjct: 95 GDAKITKGYNLPSRHVIHTVGPVYSSSDVSRKADELASCYRKSMQLAADNNLKHIAFPSI 154
Query: 138 SCGV 141
S GV
Sbjct: 155 STGV 158
>gi|433129427|ref|ZP_20314889.1| hypothetical protein WKG_01169 [Escherichia coli KTE163]
gi|431649836|gb|ELJ17175.1| hypothetical protein WKG_01169 [Escherichia coli KTE163]
Length = 177
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
KT + + +GDI++ VD IV+ N L+ GG AIH AAGP L AC ++ + Q
Sbjct: 2 KTRIHVVQGDITKLAVD----VIVNAANPSLMGGGGVDGAIHRAAGPALLDACLKVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQY 131
CP G A IT LP V+HTVGPV+ ED +L+ AY N L + AN+
Sbjct: 58 G--DCPTGHAVITLAGALPAKAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLLAANSYTS 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 VAFPAISTGV 125
>gi|406895468|gb|EKD40020.1| Appr-1-p processing protein [uncultured bacterium]
Length = 181
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 70/126 (55%), Gaps = 11/126 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ I + DI+ VD AIV+ N LL GG AIH AAGP+L C Q+
Sbjct: 14 IAIRQVDITTLAVD----AIVNAANTSLLGGGGVDGAIHRAAGPNLLAECRQLH------ 63
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
C G A+IT G+ LP +VIHTVGPV+ + E ++L S Y+ CL + + IAF
Sbjct: 64 GCETGAAKITGGYNLPAKYVIHTVGPVWRGGTHGESELLASCYRECLKIAEEKGFASIAF 123
Query: 135 PAISCG 140
PAISCG
Sbjct: 124 PAISCG 129
>gi|269120775|ref|YP_003308952.1| Appr-1-p processing protein [Sebaldella termitidis ATCC 33386]
gi|268614653|gb|ACZ09021.1| Appr-1-p processing domain protein [Sebaldella termitidis ATCC
33386]
Length = 180
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 70/128 (54%), Gaps = 7/128 (5%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T L+ GDI++ +D IV+ N LL GG AIH GP + C +I + Q
Sbjct: 6 TELRCENGDITKV----KTDVIVNAANSSLLGGGGVDGAIHRTGGPLILDECRKIVDRQG 61
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNF-HCNPEDILRSAYKNCLSVGKANNIQYI 132
CP GEA IT G KLP VIHTVGPV+++ N E+ LR Y+N L + + ++ I
Sbjct: 62 S--CPVGEAVITTGGKLPAKFVIHTVGPVWSYGKNNEEEKLRKCYRNSLKIAEDKQLESI 119
Query: 133 AFPAISCG 140
AF IS G
Sbjct: 120 AFSNISTG 127
>gi|291613846|ref|YP_003524003.1| Appr-1-p processing domain protein [Sideroxydans lithotrophicus
ES-1]
gi|291583958|gb|ADE11616.1| Appr-1-p processing domain protein [Sideroxydans lithotrophicus
ES-1]
Length = 170
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 93/179 (51%), Gaps = 25/179 (13%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T+L + DI++ VD AIV+ N LL GG AIH AAGP+L + C +
Sbjct: 2 TTLNAIQADITQLNVD----AIVNAANSSLLGGGGVDGAIHRAAGPELLQECRTLGG--- 54
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
CP G+AR+T G+KLP +IHTVGPV++ E +L S Y+ L++ + + I
Sbjct: 55 ---CPTGQARLTRGYKLPARFIIHTVGPVWHGGTQNEVKLLASCYRESLALAASQQLANI 111
Query: 133 AFPAISCGV--------SQIMTHAIK--LQTNCGFLESFWVELSAKVTTYDMDLIETAL 181
AFP IS GV S++ A++ L++ C E + SA D+ L + AL
Sbjct: 112 AFPCISTGVYGYPPDQASEVAVAAVRDFLRSPCSLQEVIFCCFSAS----DLALYQAAL 166
>gi|427564452|ref|ZP_18931740.1| RNase III inhibitor, partial [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm9]
gi|427584161|ref|ZP_18936539.1| RNase III inhibitor, partial [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm3]
gi|414034965|gb|EKT17871.1| RNase III inhibitor, partial [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm9]
gi|414036340|gb|EKT19176.1| RNase III inhibitor, partial [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm3]
Length = 162
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N L+ GG AIH AAGP L AC I + Q C G A ITP KL
Sbjct: 1 DAIVNAANASLMGGGGVDGAIHRAAGPALLDACKLIRQQQGE--CQTGHAVITPAGKLSA 58
Query: 93 SHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
VIHTVGPV+ + E ++L AY+NCL + +AN+ + IAFPAIS GV
Sbjct: 59 KAVIHTVGPVWRGGEHQEAELLEEAYRNCLLLAEANHFRSIAFPAISTGV 108
>gi|386287024|ref|ZP_10064203.1| Appr-1-p processing protein [gamma proteobacterium BDW918]
gi|385279940|gb|EIF43873.1| Appr-1-p processing protein [gamma proteobacterium BDW918]
Length = 182
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 71/127 (55%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
I +GDI VD AIV+ N LL GG AIH AAGP L C Q+
Sbjct: 6 FHIIEGDICTMAVD----AIVNAANSTLLGGGGVDGAIHRAAGPALLAYCRQLQG----- 56
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
C G+A+++PGF LP VIHTVGP++ E ++L S Y+ C+ + +A + IAF
Sbjct: 57 -CDTGDAKLSPGFLLPSRAVIHTVGPIWRGGQQGEAELLASCYRCCIQLAEAEGFKSIAF 115
Query: 135 PAISCGV 141
PAISCGV
Sbjct: 116 PAISCGV 122
>gi|363421922|ref|ZP_09310004.1| appr-1-p processing enzyme [Rhodococcus pyridinivorans AK37]
gi|359733823|gb|EHK82812.1| appr-1-p processing enzyme [Rhodococcus pyridinivorans AK37]
Length = 176
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 69/128 (53%), Gaps = 4/128 (3%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T+L I+ GDI+ VD AIV+ N LL GG AIH A GP++ AC ++
Sbjct: 2 TALDIAHGDITTIAVD----AIVNAANSSLLGGGGVDGAIHRAGGPEILAACRELRATSL 57
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
PG A T +LP VIHTVGPV++ H + ILRSAY N L V + ++
Sbjct: 58 PDGLEPGRAVATTAGRLPARWVIHTVGPVWSAHEDRSGILRSAYHNSLLVAHDLGARTVS 117
Query: 134 FPAISCGV 141
FP +S GV
Sbjct: 118 FPLVSAGV 125
>gi|126656056|ref|ZP_01727440.1| Appr-1-p processing [Cyanothece sp. CCY0110]
gi|126622336|gb|EAZ93042.1| Appr-1-p processing [Cyanothece sp. CCY0110]
Length = 179
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 86/156 (55%), Gaps = 16/156 (10%)
Query: 11 STKTSLKIS--KGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQI 68
S TS K+ +GDI++ VD AIV+ NE LL GG AIH+AAGP L + C+ +
Sbjct: 3 SNGTSKKVIAIQGDITQQGVD----AIVNAANESLLGGGGVDGAIHQAAGPALLEECHTL 58
Query: 69 PEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKAN 127
C G+A+IT G++L VIHTVGP++ + ED +L S Y+ CL +
Sbjct: 59 N------GCNVGDAKITKGYQLLAKWVIHTVGPIWRGGNHQEDQLLASCYRRCLEIATEK 112
Query: 128 NIQYIAFPAISCGVSQI---MTHAIKLQTNCGFLES 160
++ IAFPAIS GV + I +QT FL+
Sbjct: 113 RLKTIAFPAISTGVYGYPMELATPIAIQTVNNFLQG 148
>gi|398335388|ref|ZP_10520093.1| Macro domain-containing protein [Leptospira kmetyi serovar Malaysia
str. Bejo-Iso9]
Length = 171
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 74/127 (58%), Gaps = 7/127 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ + DI++ VD AIV+ N LL GG AIH A GP + + CY+I + Q
Sbjct: 2 IRLLQDDITKLEVD----AIVNAANSSLLGGGGVDGAIHRAGGPAILEECYKIRDKQG-- 55
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAF 134
C GEA IT K+P VIHTVGPV+N ED +L +AYKN L + +++ IAF
Sbjct: 56 GCKVGEAVITTAGKMPSRFVIHTVGPVWNGGNKNEDQLLANAYKNSLRIATEHSLTTIAF 115
Query: 135 PAISCGV 141
P IS G+
Sbjct: 116 PNISTGI 122
>gi|401676289|ref|ZP_10808275.1| YmdB Protein [Enterobacter sp. SST3]
gi|400216775|gb|EJO47675.1| YmdB Protein [Enterobacter sp. SST3]
Length = 180
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 71/130 (54%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K +++ GDI+ VD IV+ N L+ GG AIH AAGP L +AC + + Q
Sbjct: 2 KPQIEVIHGDITTMHVD----VIVNAANPSLMGGGGVDGAIHRAAGPQLLEACKTVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
CPPG A IT LP VIH VGPV++ E IL AY+NCL + N +
Sbjct: 58 G--ECPPGHAVITLAGDLPAKAVIHAVGPVWHGGDRHEASILEEAYRNCLRLAADNGYKT 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 MAFPAISTGV 125
>gi|330001871|ref|ZP_08304130.1| macro domain protein [Klebsiella sp. MS 92-3]
gi|328537533|gb|EGF63759.1| macro domain protein [Klebsiella sp. MS 92-3]
Length = 175
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 77/145 (53%), Gaps = 10/145 (6%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPG 80
GDI+ VD IV+ N LL GG AI AAGP L AC Q+ + Q CPPG
Sbjct: 10 GDITTLDVD----VIVNAANPSLLGGGGVDGAIPRAAGPALLAACKQVLQQQGE--CPPG 63
Query: 81 EARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISC 139
A IT LP S VIHTVGPV++ E L AYKN L + ANN + IAFPAIS
Sbjct: 64 HAVITIAGNLPASAVIHTVGPVWHGGDRMEAQTLADAYKNSLQLASANNYRSIAFPAIST 123
Query: 140 GV---SQIMTHAIKLQTNCGFLESF 161
GV + AI ++T FL +
Sbjct: 124 GVYGYPKEEAAAIAVRTVTAFLTRY 148
>gi|299068140|emb|CBJ39357.1| conserved protein of unknown function, UPF0189 family doamin
[Ralstonia solanacearum CMR15]
Length = 171
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 76/128 (59%), Gaps = 11/128 (8%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+L+ + DI+ + DAIV+ N LL GG AIH AAGP+L +AC +
Sbjct: 7 TLRALRADITTL----ACDAIVNAANSALLGGGGVDGAIHRAAGPELLEACRALHG---- 58
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSA-YKNCLSVGKANNIQYIA 133
C G+A+ITPGF LP +VIHTVGP++ E L +A Y+N L++ K ++++ IA
Sbjct: 59 --CRTGQAKITPGFLLPARYVIHTVGPIWRGGRQDEAALLAACYRNSLALAKQHDVRTIA 116
Query: 134 FPAISCGV 141
FP IS GV
Sbjct: 117 FPCISTGV 124
>gi|328791543|ref|XP_623181.2| PREDICTED: MACRO domain-containing protein 2-like isoform 2 [Apis
mellifera]
Length = 270
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 76/138 (55%), Gaps = 14/138 (10%)
Query: 4 KVQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQK 63
K++ ++ + I +GDI+ +D AIV+ N LL GG AIH+AAGP+L+K
Sbjct: 93 KIEKINEEMANKISIWQGDITSLEID----AIVNAANSSLLGGGGVDGAIHKAAGPNLKK 148
Query: 64 ACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSV 123
C + C GEA+IT G+ LP +VIHTVGP + L+ Y+N L V
Sbjct: 149 ECATLG------GCHVGEAKITGGYMLPAKYVIHTVGP----QGEKPEKLKECYENSLIV 198
Query: 124 GKANNIQYIAFPAISCGV 141
K N ++ IAFP IS G+
Sbjct: 199 AKENQLRTIAFPCISTGI 216
>gi|255938313|ref|XP_002559927.1| Pc13g15320 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584547|emb|CAP92601.1| Pc13g15320 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 219
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 72/131 (54%), Gaps = 10/131 (7%)
Query: 11 STKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPE 70
S ++ I + DI++ VD IV+ N+ LL GG AIH AAGP L + CY +
Sbjct: 34 SLNNTISIIRNDITKLQVD----CIVNAANQSLLGGGGVDGAIHRAAGPKLVEECYHLD- 88
Query: 71 AQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQ 130
C G+A+IT + LP VIHTVGP++ +P +L+S Y+ L + N ++
Sbjct: 89 -----GCETGDAKITSAYNLPCKRVIHTVGPIYRKEDDPVALLKSCYRRSLELAVENGMK 143
Query: 131 YIAFPAISCGV 141
IAF AIS GV
Sbjct: 144 SIAFSAISTGV 154
>gi|315925151|ref|ZP_07921367.1| RNase III regulator YmdB [Pseudoramibacter alactolyticus ATCC
23263]
gi|315621522|gb|EFV01487.1| RNase III regulator YmdB [Pseudoramibacter alactolyticus ATCC
23263]
Length = 187
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 71/123 (57%), Gaps = 10/123 (8%)
Query: 18 ISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRC 77
+ +GDI+ + IV+ N LL GG AIH AAGP L+ AC +I C
Sbjct: 22 LRRGDITALRIA----CIVNAANTTLLGGGGVDGAIHRAAGPQLKAACAKIGG------C 71
Query: 78 PPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAI 137
G+A IT G++L +VIHTVGP+++ +L + YKN L + AN+I+ IAFPAI
Sbjct: 72 ATGQAVITRGYRLGADYVIHTVGPIYSNDERDAPLLAACYKNSLDLAAANDIEEIAFPAI 131
Query: 138 SCG 140
SCG
Sbjct: 132 SCG 134
>gi|355572156|ref|ZP_09043338.1| Appr-1-p processing domain protein [Methanolinea tarda NOBI-1]
gi|354824872|gb|EHF09111.1| Appr-1-p processing domain protein [Methanolinea tarda NOBI-1]
Length = 295
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 71/129 (55%), Gaps = 11/129 (8%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
+ + + +GDI+ VD AIV+ NE LL GG AIH AGP L C ++
Sbjct: 22 RERVTVVEGDITEQYVD----AIVNAANETLLGGGGVDGAIHRVAGPGLLGECRRLGG-- 75
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
C G+A+IT G+ LP VIH VGPV+ + E D+L S Y L + +AN I+
Sbjct: 76 ----CQTGDAKITAGYNLPARFVIHAVGPVWRGGGHGEDDLLASCYTRSLELAEANGIKT 131
Query: 132 IAFPAISCG 140
IAFPAIS G
Sbjct: 132 IAFPAISTG 140
>gi|408409867|ref|ZP_11181138.1| RNase III regulator YmdB [Lactobacillus sp. 66c]
gi|409350854|ref|ZP_11233829.1| RNase III regulator YmdB [Lactobacillus equicursoris CIP 110162]
gi|407875985|emb|CCK82944.1| RNase III regulator YmdB [Lactobacillus sp. 66c]
gi|407877124|emb|CCK85887.1| RNase III regulator YmdB [Lactobacillus equicursoris CIP 110162]
Length = 166
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 74/126 (58%), Gaps = 12/126 (9%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L+I +GDI++ VD AIV+ N+ LL G AIH AAGP+L C +
Sbjct: 3 LEIWQGDITKLQVD----AIVNAANKSLLGGAGVDGAIHRAAGPELLAECRGLGG----- 53
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C GEA+IT G++LP +VIHTVGP++ H +P +L + Y+N L V + + +AF
Sbjct: 54 -CETGEAKITKGYRLPAKYVIHTVGPIYTGSHSDPL-LLGTCYRNSLRVAAEHGLHSVAF 111
Query: 135 PAISCG 140
PAIS G
Sbjct: 112 PAISTG 117
>gi|300113956|ref|YP_003760531.1| Appr-1-p processing protein [Nitrosococcus watsonii C-113]
gi|299539893|gb|ADJ28210.1| Appr-1-p processing domain protein [Nitrosococcus watsonii C-113]
Length = 173
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 74/127 (58%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ I +G I++ VD AI++ N+ LL GG AIH AAGP+L++ C +
Sbjct: 6 ITIMQGGITKMEVD----AIINAANQTLLGGGGVDGAIHRAAGPELKEECRSLGG----- 56
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAF 134
C GEA++T G++LP ++IHTVGP++ ED +L Y+N L++ A I +AF
Sbjct: 57 -CKTGEAKLTRGYQLPARYIIHTVGPIWKGGQRNEDQLLAQCYRNSLAIALAKGISTLAF 115
Query: 135 PAISCGV 141
P+IS G
Sbjct: 116 PSISTGA 122
>gi|377556710|ref|ZP_09786399.1| Appr-1-p processing domain protein [Lactobacillus gastricus PS3]
gi|376167789|gb|EHS86609.1| Appr-1-p processing domain protein [Lactobacillus gastricus PS3]
Length = 171
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 73/128 (57%), Gaps = 11/128 (8%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+L + GDI+++ VD AIV+ N L GG AIH AGP L A Q+
Sbjct: 3 ALTVKLGDITQFKVD----AIVNAANTTLRGGGGVDGAIHRTAGPALDLAFAQLGG---- 54
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
CP G+ARITPGF LP ++IHT GP++ + H ++L +Y+N L + + Q +A
Sbjct: 55 --CPTGQARITPGFNLPAKYIIHTPGPIWVDGHHQEAELLADSYRNSLQLALSYGCQTVA 112
Query: 134 FPAISCGV 141
FP+IS GV
Sbjct: 113 FPSISTGV 120
>gi|365904576|ref|ZP_09442335.1| appr-1-p processing domain protein [Lactobacillus versmoldensis
KCTC 3814]
Length = 181
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 80/150 (53%), Gaps = 17/150 (11%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N+ LL GG AIH+AAGP L + C + C GEA+IT G+ LP
Sbjct: 17 DAIVNAANKSLLGGGGVDGAIHKAAGPQLLEECKTLN------GCQTGEAKITKGYNLPS 70
Query: 93 SHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQI---MTHAI 149
VIHTVGPV++ +++L + Y+N L + + ++ +AF AIS GV I
Sbjct: 71 KFVIHTVGPVYSGKAKDKEMLTNCYRNSLDLARQKDLHSVAFSAISTGVYGYPLDKAAVI 130
Query: 150 KLQTNCGFLESFWVELSAKVTTYDMDLIET 179
L T S W+ ++ YDMD++ T
Sbjct: 131 ALTTT-----STWLNDNSD---YDMDVLLT 152
>gi|118591990|ref|ZP_01549384.1| hypothetical protein SIAM614_24977 [Stappia aggregata IAM 12614]
gi|118435286|gb|EAV41933.1| hypothetical protein SIAM614_24977 [Labrenzia aggregata IAM 12614]
Length = 173
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 68/122 (55%), Gaps = 11/122 (9%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPG 80
GDI+R VD AIV+ N LL GG AIH AAGP+L C + C G
Sbjct: 9 GDITRLAVD----AIVNAANSSLLGGGGIDRAIHRAAGPELLAECRTLNG------CGTG 58
Query: 81 EARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISC 139
A+IT G++LP HVIHTVGPV+ E D+L S Y+ L + N+ IAFPAIS
Sbjct: 59 NAKITKGYRLPARHVIHTVGPVWKGGSAGEADLLASCYETSLRLAADNDCWSIAFPAIST 118
Query: 140 GV 141
G+
Sbjct: 119 GI 120
>gi|375144938|ref|YP_005007379.1| Appr-1-p processing protein [Niastella koreensis GR20-10]
gi|361058984|gb|AEV97975.1| Appr-1-p processing domain protein [Niastella koreensis GR20-10]
Length = 169
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 72/127 (56%), Gaps = 7/127 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ +GD++R VD AIV+ N LL GG AIH A GP + + C I Q
Sbjct: 2 IRLIQGDLTRLEVD----AIVNAANTSLLGGGGVDGAIHRAGGPAILEECRAIRAKQGG- 56
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
C GEA IT KLP +VIHTVGPV+N N E D+L + Y+N L + N I IAF
Sbjct: 57 -CEVGEAVITTAGKLPAKYVIHTVGPVWNGGHNGEPDLLANCYRNSLRLAVENGITTIAF 115
Query: 135 PAISCGV 141
P IS G+
Sbjct: 116 PNISTGI 122
>gi|116630330|ref|YP_815589.1| histone macroH2A1 family phosphatase [Lactobacillus gasseri ATCC
33323]
gi|282852291|ref|ZP_06261636.1| RNase III regulator YmdB [Lactobacillus gasseri 224-1]
gi|311110057|ref|ZP_07711454.1| appr-1-p processing enzyme domain protein [Lactobacillus gasseri
MV-22]
gi|420148580|ref|ZP_14655846.1| RNase III regulator YmdB [Lactobacillus gasseri CECT 5714]
gi|116095912|gb|ABJ61064.1| Predicted phosphatase, histone macroH2A1 family [Lactobacillus
gasseri ATCC 33323]
gi|282556570|gb|EFB62187.1| RNase III regulator YmdB [Lactobacillus gasseri 224-1]
gi|311065211|gb|EFQ45551.1| appr-1-p processing enzyme domain protein [Lactobacillus gasseri
MV-22]
gi|398399781|gb|EJN53399.1| RNase III regulator YmdB [Lactobacillus gasseri CECT 5714]
Length = 168
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 72/130 (55%), Gaps = 12/130 (9%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
L++ + DI++ VD AIV+ N LL GG AIH AAGP+L C +
Sbjct: 2 NDLQVIQADITKLKVD----AIVNAANRTLLGGGGVDGAIHRAAGPELLAECRTLHG--- 54
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVF--NFHCNPEDILRSAYKNCLSVGKANNIQY 131
C GEA+ T G+ LP +VIHTVGPV+ NF ++L + Y+N L++ K N+
Sbjct: 55 ---CETGEAKSTKGYNLPAKYVIHTVGPVYNPNFAQQDAELLAACYRNSLNLAKQYNLHS 111
Query: 132 IAFPAISCGV 141
IAF IS GV
Sbjct: 112 IAFSCISTGV 121
>gi|42519805|ref|NP_965735.1| hypothetical protein LJ0520 [Lactobacillus johnsonii NCC 533]
gi|41584095|gb|AAS09701.1| hypothetical protein LJ_0520 [Lactobacillus johnsonii NCC 533]
Length = 168
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 71/130 (54%), Gaps = 12/130 (9%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T+L + + DI++ VD IV+ N LL GG AIH AAGP+L C +
Sbjct: 2 TNLHVIQADITKLKVD----VIVNAANRTLLGGGGVDGAIHRAAGPELLAECRTLKG--- 54
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVF--NFHCNPEDILRSAYKNCLSVGKANNIQY 131
C GEA+IT G+ LP +VIHTVGPV+ NF ++L + Y+N L + K +
Sbjct: 55 ---CDTGEAKITKGYNLPAKYVIHTVGPVYNPNFAQKDAELLANCYRNSLDLAKKYKLHS 111
Query: 132 IAFPAISCGV 141
IAF IS GV
Sbjct: 112 IAFSCISTGV 121
>gi|346321916|gb|EGX91515.1| LRP16 family protein [Cordyceps militaris CM01]
Length = 205
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 67/122 (54%), Gaps = 10/122 (8%)
Query: 20 KGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPP 79
+GDI++ VD AIV+ N LL GG AIH AAGP L C + CP
Sbjct: 46 RGDITKLEVD----AIVNAANTALLGGGGVDGAIHRAAGPGLLDECRALGG------CPT 95
Query: 80 GEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISC 139
GEARIT G+ LP +VIH VGPV++ +LRS Y+ L + A ++ +AF IS
Sbjct: 96 GEARITKGYLLPAQYVIHAVGPVYSSDEASATLLRSCYRAGLELAAAKGLKSVAFSGIST 155
Query: 140 GV 141
G+
Sbjct: 156 GI 157
>gi|436838404|ref|YP_007323620.1| Appr-1-p processing domain protein [Fibrella aestuarina BUZ 2]
gi|384069817|emb|CCH03027.1| Appr-1-p processing domain protein [Fibrella aestuarina BUZ 2]
Length = 175
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 90/179 (50%), Gaps = 20/179 (11%)
Query: 1 MTFKVQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPD 60
MTF Q ++++ +GDI++ VD AIV+ N LL GG AIH AAGP+
Sbjct: 1 MTFPYQ------HATIELRQGDITKLAVD----AIVNAANSSLLGGGGVDGAIHRAAGPE 50
Query: 61 LQKACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFN-FHCNPEDILRSAYKN 119
L + C + C G A++T G++LP +VIHTVGPV+N N +L S Y
Sbjct: 51 LVQECRLLGG------CKTGNAKLTKGYRLPARYVIHTVGPVWNGGQLNEPALLASCYVR 104
Query: 120 CLSVGKANNIQYIAFPAISCGVSQIMTHA---IKLQTNCGFLESFWVELSAKVTTYDMD 175
L V + ++ +AFP IS G+ + ++T GFLE+ + +D D
Sbjct: 105 SLEVAVQHGLKTVAFPNISTGIYGYPKDEACQVAIRTVAGFLETNQAIETVYFVCFDAD 163
>gi|291524033|emb|CBK89620.1| Predicted phosphatase homologous to the C-terminal domain of
histone macroH2A1 [Eubacterium rectale DSM 17629]
gi|291527904|emb|CBK93490.1| Predicted phosphatase homologous to the C-terminal domain of
histone macroH2A1 [Eubacterium rectale M104/1]
Length = 179
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 72/126 (57%), Gaps = 10/126 (7%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++ KGDI++ R+ AIV+ N LL GG AIH AAGP+L C +
Sbjct: 2 IRTVKGDITKI---RNVQAIVNAANNSLLGGGGVDGAIHRAAGPELLAECRTLH------ 52
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAF 134
C GEA+IT + LP +VIHTVGP++N N ED +L + Y N + + N I+ IAF
Sbjct: 53 GCETGEAKITKAYNLPCDYVIHTVGPIWNGGRNREDELLANCYFNSMKLAMDNGIRSIAF 112
Query: 135 PAISCG 140
P+IS G
Sbjct: 113 PSISTG 118
>gi|365969935|ref|YP_004951496.1| protein YmdB [Enterobacter cloacae EcWSU1]
gi|365748848|gb|AEW73075.1| UPF0189 protein ymdB [Enterobacter cloacae EcWSU1]
Length = 180
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 71/130 (54%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K +++ GDI+ VD IV+ N L+ GG AIH AAGP L +AC + + Q
Sbjct: 2 KPQIEVIHGDITTMHVD----VIVNAANPSLMGGGGVDGAIHRAAGPQLLEACKAVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
CPPG A IT LP VIH VGPV++ E IL AY+NCL + N +
Sbjct: 58 G--ECPPGHAVITLAGDLPAKAVIHAVGPVWHGGDRHEASILEEAYRNCLRLAADNGYKT 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 MAFPAISTGV 125
>gi|225075468|ref|ZP_03718667.1| hypothetical protein NEIFLAOT_00473 [Neisseria flavescens
NRL30031/H210]
gi|224953187|gb|EEG34396.1| hypothetical protein NEIFLAOT_00473 [Neisseria flavescens
NRL30031/H210]
Length = 175
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 12 TKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEA 71
T + +GDI+R +D AIV+ N LL GG AIH AAG +L + C +
Sbjct: 3 TMAVFDVVEGDITRLAID----AIVNAANSSLLGGGGVDGAIHRAAGKELLEECRTLGG- 57
Query: 72 QPRVRCPPGEARITPGFKLPVSHVIHTVGPV-FNFHCNPEDILRSAYKNCLSVGKANNIQ 130
C GEA+IT G++LP VIHTVGPV F N E L +Y N L + + +N+
Sbjct: 58 -----CRTGEAKITKGYRLPARFVIHTVGPVWFGGKQNEEAKLAQSYANSLLLAQKHNLH 112
Query: 131 YIAFPAISCGVSQIMTHA 148
IAFP IS GV + A
Sbjct: 113 SIAFPCISTGVYRFPAEA 130
>gi|406915464|gb|EKD54543.1| Appr-1-p processing protein [uncultured bacterium]
Length = 177
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 81/151 (53%), Gaps = 14/151 (9%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K LK+ +GDI+ VD AIV+ N L G AIH AGP+L + C ++
Sbjct: 5 KAKLKVIQGDITHLKVD----AIVNAANNSLSGGCGVDGAIHRVAGPELLEECKKLG--- 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
C G A++T G+ LP HVIH VGPV+ E +L S Y+N L + N+I+
Sbjct: 58 ---GCSTGHAKLTKGYGLPAHHVIHAVGPVWRGGAKGEPRLLASCYENSLKLALDNDIKT 114
Query: 132 IAFPAISCGVSQI-MTHAIKLQTN--CGFLE 159
IAFPAISCG+ ++ A+ + N FLE
Sbjct: 115 IAFPAISCGIYGYPISQAVNIAVNETANFLE 145
>gi|17545053|ref|NP_518455.1| hypothetical protein RSc0334 [Ralstonia solanacearum GMI1000]
gi|20178146|sp|Q8Y2K1.1|Y334_RALSO RecName: Full=Macro domain-containing protein RSc0334
gi|17427343|emb|CAD13862.1| conserved hypothetical protein [Ralstonia solanacearum GMI1000]
Length = 171
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 76/128 (59%), Gaps = 11/128 (8%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+L+ + DI+ + DAIV+ N LL GG AIH AAGP+L +AC +
Sbjct: 7 TLRALRADITTL----ACDAIVNAANSALLGGGGVDGAIHRAAGPELLEACRALHG---- 58
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSA-YKNCLSVGKANNIQYIA 133
C G+A+ITPGF LP ++IHTVGP++ E L +A Y+N L++ K ++++ IA
Sbjct: 59 --CRTGQAKITPGFLLPARYIIHTVGPIWRGGRQDEAALLAACYRNSLALAKQHDVRTIA 116
Query: 134 FPAISCGV 141
FP IS GV
Sbjct: 117 FPCISTGV 124
>gi|239908471|ref|YP_002955213.1| hypothetical protein DMR_38360 [Desulfovibrio magneticus RS-1]
gi|239798338|dbj|BAH77327.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 189
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 76/135 (56%), Gaps = 9/135 (6%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
SL++ +GDI+ VD +DAIV+ N L GG AIH AAGP L AC I R
Sbjct: 13 SLRLIEGDIT---VD-DADAIVNAANSALAGGGGVDGAIHRAAGPKLPAACRDI---IAR 65
Query: 75 V-RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
+ P G A ITPGF+LP H+IHTVGP++ E + LRSAY ++ + + +
Sbjct: 66 IGSLPAGGAVITPGFELPARHIIHTVGPIWRGGETGEPEALRSAYAQSINRAVEHGLTTV 125
Query: 133 AFPAISCGVSQIMTH 147
AFPA+S GV H
Sbjct: 126 AFPAVSTGVYGFPVH 140
>gi|380028775|ref|XP_003698063.1| PREDICTED: MACRO domain-containing protein 2-like [Apis florea]
Length = 270
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 76/138 (55%), Gaps = 14/138 (10%)
Query: 4 KVQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQK 63
KV+ ++ + I +GDI+ +D AIV+ N LL GG AIH+AAGP+L+K
Sbjct: 93 KVEKINEEMANKISIWQGDITSLEID----AIVNAANSSLLGGGGVDGAIHKAAGPNLKK 148
Query: 64 ACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSV 123
C + C GEA+IT G+ LP +VIHTVGP + L+ Y+N L V
Sbjct: 149 ECATLG------GCHVGEAKITGGYMLPAKYVIHTVGP----QGEKPEKLKECYENSLIV 198
Query: 124 GKANNIQYIAFPAISCGV 141
+ N ++ IAFP IS G+
Sbjct: 199 ARENQLRTIAFPCISTGI 216
>gi|357037095|ref|ZP_09098895.1| Appr-1-p processing domain protein [Desulfotomaculum gibsoniae DSM
7213]
gi|355361260|gb|EHG09015.1| Appr-1-p processing domain protein [Desulfotomaculum gibsoniae DSM
7213]
Length = 337
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 74/126 (58%), Gaps = 11/126 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L+I + DI++ +DAIV+ N LL GG AIH AAG L C +
Sbjct: 3 LEIIRNDITKV----HADAIVNAANTSLLGGGGVDGAIHRAAGSQLLAECRALG------ 52
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFN-FHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C G+A+IT G+KLP ++IHTVGPV++ + N E +L YKN L++ K +N++ IAF
Sbjct: 53 GCEIGQAKITKGYKLPAKYIIHTVGPVWHGGNDNEEKLLADCYKNSLALAKKHNLESIAF 112
Query: 135 PAISCG 140
P IS G
Sbjct: 113 PLISSG 118
>gi|425287779|ref|ZP_18678685.1| RNase III regulator YmdB [Escherichia coli 3006]
gi|432369101|ref|ZP_19612201.1| hypothetical protein WCM_03055 [Escherichia coli KTE10]
gi|432530378|ref|ZP_19767415.1| hypothetical protein A191_03630 [Escherichia coli KTE233]
gi|408216998|gb|EKI41285.1| RNase III regulator YmdB [Escherichia coli 3006]
gi|430887728|gb|ELC10467.1| hypothetical protein WCM_03055 [Escherichia coli KTE10]
gi|431056217|gb|ELD65737.1| hypothetical protein A191_03630 [Escherichia coli KTE233]
Length = 177
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
KT + + GDI++ VD IV+ N L+ GG AIH AAGP L AC ++ + Q
Sbjct: 2 KTRIHVVLGDITKLAVD----VIVNAANPSLMGGGGVDGAIHRAAGPALLDACLKVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQY 131
CP G A IT LP V+HTVGPV+ ED +L+ AY N L + AN+
Sbjct: 58 G--DCPTGHAVITLAGDLPAKAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVAANSFTS 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 VAFPAISTGV 125
>gi|373123583|ref|ZP_09537429.1| hypothetical protein HMPREF0982_02358 [Erysipelotrichaceae
bacterium 21_3]
gi|371660916|gb|EHO26160.1| hypothetical protein HMPREF0982_02358 [Erysipelotrichaceae
bacterium 21_3]
Length = 168
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 75/127 (59%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+KI GDI+ VD AIV+ N LL GG AIH AAGP+L + C +
Sbjct: 3 IKILSGDITTLQVD----AIVNAANVSLLGGGGVDGAIHRAAGPELFEECRTLH------ 52
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
C GEA+IT G++LP S+VIHT GP++ + E ++L S Y++C+ + K +I IAF
Sbjct: 53 GCKTGEAKITKGYRLPCSYVIHTPGPIWQGGNHGECELLESCYRSCMKLAKEYHITSIAF 112
Query: 135 PAISCGV 141
P IS GV
Sbjct: 113 PYISTGV 119
>gi|167909359|ref|ZP_02496450.1| hypothetical protein Bpse112_02622 [Burkholderia pseudomallei 112]
Length = 177
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 72/130 (55%), Gaps = 10/130 (7%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAGP+L K C + C G+A++T G++LP
Sbjct: 22 DAIVNAANASLLGGGGVDGAIHRAAGPELVKECATLGG------CATGDAKLTRGYRLPA 75
Query: 93 SHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCGVSQIM---THA 148
+VIHTVGPV+ + E ++L S Y+ L V IAFPAISCGV + A
Sbjct: 76 KYVIHTVGPVWRGGGHGEAELLASCYRRSLEVAAGAGCASIAFPAISCGVYRFSPADATA 135
Query: 149 IKLQTNCGFL 158
I ++T G L
Sbjct: 136 IAVRTVAGAL 145
>gi|415877462|ref|ZP_11543597.1| RNase III regulator YmdB [Escherichia coli MS 79-10]
gi|433091371|ref|ZP_20277663.1| hypothetical protein WK1_01018 [Escherichia coli KTE138]
gi|342927951|gb|EGU96673.1| RNase III regulator YmdB [Escherichia coli MS 79-10]
gi|431612912|gb|ELI82117.1| hypothetical protein WK1_01018 [Escherichia coli KTE138]
Length = 177
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
KT + + +GDI++ VD IV+ N L+ GG AIH AAGP L AC ++ + Q
Sbjct: 2 KTCIHVVQGDITKLAVD----VIVNAANPSLMGGGGVDGAIHRAAGPALLDACLKVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQY 131
CP G A IT LP V+HTVGPV+ ED +L+ AY N L + AN+
Sbjct: 58 G--DCPTGHAVITLAGALPAKAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVAANSYTS 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 VAFPAISTGV 125
>gi|326802368|ref|YP_004320187.1| Appr-1-p processing protein [Sphingobacterium sp. 21]
gi|326553132|gb|ADZ81517.1| Appr-1-p processing domain protein [Sphingobacterium sp. 21]
Length = 168
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 85/164 (51%), Gaps = 10/164 (6%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ KGDI++ VD A+V+ N LL GG AIH A GP + + C +I Q
Sbjct: 2 IELLKGDITKLEVD----AVVNAANSSLLGGGGVDGAIHRAGGPAILEECQRIRAKQGG- 56
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAF 134
C GEA IT G LP VIHTVGP +N N E+ +L SAY++ L++ + +Q IAF
Sbjct: 57 -CMVGEAVITTGGNLPAKFVIHTVGPTWNGGKNNEEALLASAYRSSLALAVEHQLQSIAF 115
Query: 135 PAISCGVSQI---MTHAIKLQTNCGFLESFWVELSAKVTTYDMD 175
P IS GV + I + T FL E+ YD +
Sbjct: 116 PNISTGVYRFPKDRAAEIAIDTVKEFLNFSSAEIKVTFVCYDEE 159
>gi|114051600|ref|NP_001040417.1| LRP16 protein [Bombyx mori]
gi|95102810|gb|ABF51346.1| LRP16 protein [Bombyx mori]
Length = 275
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 81/154 (52%), Gaps = 19/154 (12%)
Query: 11 STKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPE 70
S + I KGDI++ +D A+V+ N L GG AIH AAGP LQ C I
Sbjct: 106 SISERVSIFKGDITKLEID----AVVNAANSRLKAGGGVDGAIHRAAGPFLQAECDSIG- 160
Query: 71 AQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQ 130
CP G+A++T G+ LP ++IHTVGP + L S Y+ CLS + I+
Sbjct: 161 -----GCPTGDAKVTGGYNLPAKYIIHTVGP----QDGSAEKLESCYEKCLSFQQEYQIK 211
Query: 131 YIAFPAISCGV----SQIMTHAIKLQTNCGFLES 160
IAFP IS G+ +++ H I L+T FLE+
Sbjct: 212 SIAFPCISTGIYGFPNRLAAH-IALRTARKFLET 244
>gi|374710010|ref|ZP_09714444.1| Appr-1-p processing domain-containing protein [Sporolactobacillus
inulinus CASD]
Length = 171
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 83/150 (55%), Gaps = 14/150 (9%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
++ I GDI++ +DAIV+ N LL GG AIH AAGP+L C +
Sbjct: 3 NITIILGDITQV----EADAIVNAANTTLLGGGGVDGAIHRAAGPELLAECRTLN----- 53
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIA 133
C GEA+IT G++LP +VIHT GP++ + E ++L+S+Y N L + A + Q +A
Sbjct: 54 -GCRTGEAKITKGYRLPARYVIHTPGPIWQGGADHECELLQSSYLNSLKLADAYDCQTVA 112
Query: 134 FPAISCGVSQIMTHA---IKLQTNCGFLES 160
FP+IS GV A I LQT FL +
Sbjct: 113 FPSISTGVYHFPLEAAAPIALQTIREFLRT 142
>gi|367471780|ref|ZP_09471385.1| conserved hypothetical protein; putative Appr-1-p processing enzyme
family protein [Bradyrhizobium sp. ORS 285]
gi|365276099|emb|CCD83853.1| conserved hypothetical protein; putative Appr-1-p processing enzyme
family protein [Bradyrhizobium sp. ORS 285]
Length = 185
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 78/142 (54%), Gaps = 14/142 (9%)
Query: 1 MTFKVQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPD 60
M++ V+T+ T ++ DI++ VD AIV+ N LL GG AIH AAGPD
Sbjct: 1 MSYPVRTIG---ATRFEVVTADITKLGVD----AIVNAANSSLLGGGGVDGAIHRAAGPD 53
Query: 61 LQKACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKN 119
L C + C GEA+IT G++LP HVIHTVGPV+ E ++L S Y+
Sbjct: 54 LVMECRMLHG------CKTGEAKITKGYRLPARHVIHTVGPVWQGGDRGEPELLASCYRR 107
Query: 120 CLSVGKANNIQYIAFPAISCGV 141
+ + + + +AFPAIS G+
Sbjct: 108 SIELCHKHLLDSVAFPAISTGI 129
>gi|283833660|ref|ZP_06353401.1| RNase III regulator YmdB [Citrobacter youngae ATCC 29220]
gi|291071345|gb|EFE09454.1| RNase III regulator YmdB [Citrobacter youngae ATCC 29220]
Length = 180
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 70/129 (54%), Gaps = 7/129 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
++ + + GDI+ VD IV+ N LL GG AIH AAGP L AC Q+ + Q
Sbjct: 2 QSRVHVVHGDITTIAVD----VIVNAANPSLLGGGGVDGAIHRAAGPALLAACKQVIQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
CPPG A IT LP VIHTVGPV+ + E + L AY N L + AN Q
Sbjct: 58 G--ECPPGHAVITLAGALPAKAVIHTVGPVWQGGGHHEAERLEEAYLNTLQLALANGYQS 115
Query: 132 IAFPAISCG 140
IAFPAIS G
Sbjct: 116 IAFPAISTG 124
>gi|414866683|tpg|DAA45240.1| TPA: hypothetical protein ZEAMMB73_411350 [Zea mays]
Length = 159
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 54/71 (76%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
LK+ KGDI+ W VD ++DAIV+ NE +L GG AIH+AAGP+L +AC ++PE +P V
Sbjct: 76 LKLHKGDITLWSVDCATDAIVNAANERMLGGGGVDGAIHQAAGPELVQACRKVPEVKPGV 135
Query: 76 RCPPGEARITP 86
RCP GEARITP
Sbjct: 136 RCPTGEARITP 146
>gi|407790296|ref|ZP_11137391.1| hypothetical protein B3C1_08416 [Gallaecimonas xiamenensis 3-C-1]
gi|407204918|gb|EKE74897.1| hypothetical protein B3C1_08416 [Gallaecimonas xiamenensis 3-C-1]
Length = 178
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 75/127 (59%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L++ +GDI+ VD AIV+ N LL GG AIH +AGP+L+ C +
Sbjct: 10 LRVWQGDITTLPVD----AIVNAANPSLLGGGGVDGAIHRSAGPELKTYCAGLG------ 59
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDI-LRSAYKNCLSVGKANNIQYIAF 134
C G+A+++PGF LP +V+HTVGPV++ E + L + Y+N L + A + +AF
Sbjct: 60 GCETGQAKLSPGFALPSQYVVHTVGPVWHGGGQQEALALAACYRNSLLLADAEGVVSLAF 119
Query: 135 PAISCGV 141
PAISCGV
Sbjct: 120 PAISCGV 126
>gi|355669731|ref|ZP_09056996.1| hypothetical protein HMPREF9469_00033 [Clostridium citroniae
WAL-17108]
gi|354816569|gb|EHF01156.1| hypothetical protein HMPREF9469_00033 [Clostridium citroniae
WAL-17108]
Length = 178
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 87/164 (53%), Gaps = 27/164 (16%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
KT ++ GDI++ DAIV+ N LL GG AIH AG +L + C +
Sbjct: 3 KTIVETVLGDITKVS---GMDAIVNAANSSLLGGGGVDGAIHRGAGKELLEECRLLG--- 56
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCN-PEDILRSAYKNCLSVGKANNIQY 131
C G+A+IT G++LP +++IHTVGPV+N + E++L S Y+N L + ++++
Sbjct: 57 ---GCKTGQAKITKGYQLPCTYIIHTVGPVWNGGTHSEEELLASCYRNSLQLAVEHHVRQ 113
Query: 132 IAFPAISCGVSQIMTHAIKLQTNCGFLESFWVELSAKVTTYDMD 175
IAFP+IS G+ F VEL+A+ +MD
Sbjct: 114 IAFPSISTGIYH-----------------FPVELAAETAANEMD 140
>gi|366158732|ref|ZP_09458594.1| RNase III inhibitor [Escherichia sp. TW09308]
gi|432371770|ref|ZP_19614820.1| hypothetical protein WCO_00795 [Escherichia coli KTE11]
gi|430898099|gb|ELC20234.1| hypothetical protein WCO_00795 [Escherichia coli KTE11]
Length = 177
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K+ + + +GDI++ VD IV+ N L+ GG AIH AAGP L AC ++ + Q
Sbjct: 2 KSRIHVVQGDITKLAVD----VIVNAANPSLMGGGGVDGAIHRAAGPALLDACLKVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQY 131
CP G A IT LP V+HTVGPV+ ED +L+ AY N L + AN
Sbjct: 58 G--DCPTGHAVITLAGDLPAKAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVAANGYSS 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 VAFPAISTGV 125
>gi|348514508|ref|XP_003444782.1| PREDICTED: MACRO domain-containing protein 1-like [Oreochromis
niloticus]
Length = 418
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 69/128 (53%), Gaps = 12/128 (9%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ + GDI++ +D AIV+ N LL GG AIH AAGP L+K C +
Sbjct: 240 ISLYNGDITKLEID----AIVNAANNTLLGGGGVDGAIHRAAGPMLKKECASLNG----- 290
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED--ILRSAYKNCLSVGKANNIQYIA 133
C GEA+IT G+ LP +VIHTVGP+ E+ LRS Y+N L N + +A
Sbjct: 291 -CKTGEAKITCGYGLPAKYVIHTVGPIAQGGVGEEEKNALRSCYRNSLETATKNGARSVA 349
Query: 134 FPAISCGV 141
FP IS G+
Sbjct: 350 FPCISTGI 357
>gi|47169184|pdb|1SPV|A Chain A, Crystal Structure Of The Putative Phosphatase Of
Escherichia Coli, Northeast Structural Genomoics Target
Er58
Length = 184
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
KT + + +GDI++ VD IV+ N L GG AIH AAGP L AC ++ + Q
Sbjct: 2 KTRIHVVQGDITKLAVD----VIVNAANPSLXGGGGVDGAIHRAAGPALLDACLKVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQY 131
CP G A IT LP V+HTVGPV+ ED +L+ AY N L + AN+
Sbjct: 58 G--DCPTGHAVITLAGDLPAKAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVAANSYTS 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 VAFPAISTGV 125
>gi|158333525|ref|YP_001514697.1| AraC family transcriptional regulator [Acaryochloris marina
MBIC11017]
gi|158303766|gb|ABW25383.1| appr-1-p processing enzyme family [Acaryochloris marina MBIC11017]
Length = 171
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 71/129 (55%), Gaps = 11/129 (8%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T +I + DI+ VD AIV+ NE LL GG AIH AGP L C +
Sbjct: 3 TRTEIVQTDITTLKVD----AIVNAANESLLGGGGVDGAIHRTAGPQLLAECRTLKG--- 55
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSA-YKNCLSVGKANNIQYI 132
C G A++T G++LP +VIHTVGP++ E IL A Y+ L++ N IQ I
Sbjct: 56 ---CKTGHAKLTKGYQLPAKYVIHTVGPIWRGGGANEAILLQACYQRSLALAVDNGIQTI 112
Query: 133 AFPAISCGV 141
AFPAISCGV
Sbjct: 113 AFPAISCGV 121
>gi|344173484|emb|CCA88649.1| conserved hypothetical protein, UPF0189 family doamin [Ralstonia
syzygii R24]
Length = 171
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 68/110 (61%), Gaps = 7/110 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAGP+L +AC + C G+A+ITPGF LP
Sbjct: 21 DAIVNAANSALLGGGGVDGAIHRAAGPELLEACRALHG------CRTGQAKITPGFLLPA 74
Query: 93 SHVIHTVGPVFNFHCNPEDILRSA-YKNCLSVGKANNIQYIAFPAISCGV 141
+VIHTVGP++ E L +A Y+N L++ K ++++ IAFP IS GV
Sbjct: 75 RYVIHTVGPIWRGGRQDEATLLAACYRNSLALAKQHDVRTIAFPCISTGV 124
>gi|331667441|ref|ZP_08368305.1| RNase III regulator YmdB [Escherichia coli TA271]
gi|417225350|ref|ZP_12028641.1| macro domain protein [Escherichia coli 96.154]
gi|417266593|ref|ZP_12053961.1| macro domain protein [Escherichia coli 3.3884]
gi|417601459|ref|ZP_12252037.1| macro domain protein [Escherichia coli STEC_94C]
gi|419369368|ref|ZP_13910494.1| hypothetical protein ECDEC14A_1111 [Escherichia coli DEC14A]
gi|419951890|ref|ZP_14468072.1| hypothetical protein ECMT8_20968 [Escherichia coli CUMT8]
gi|422762887|ref|ZP_16816643.1| macro domain-containing protein [Escherichia coli E1167]
gi|423709054|ref|ZP_17683432.1| UPF0189 protein ymdB [Escherichia coli B799]
gi|432376154|ref|ZP_19619162.1| hypothetical protein WCQ_01033 [Escherichia coli KTE12]
gi|432834119|ref|ZP_20067661.1| hypothetical protein A1YO_01472 [Escherichia coli KTE136]
gi|432967188|ref|ZP_20156104.1| hypothetical protein A15G_02285 [Escherichia coli KTE203]
gi|324117382|gb|EGC11289.1| macro domain-containing protein [Escherichia coli E1167]
gi|331065026|gb|EGI36921.1| RNase III regulator YmdB [Escherichia coli TA271]
gi|345352062|gb|EGW84312.1| macro domain protein [Escherichia coli STEC_94C]
gi|378221043|gb|EHX81294.1| hypothetical protein ECDEC14A_1111 [Escherichia coli DEC14A]
gi|385706761|gb|EIG43799.1| UPF0189 protein ymdB [Escherichia coli B799]
gi|386200398|gb|EIH99389.1| macro domain protein [Escherichia coli 96.154]
gi|386231403|gb|EII58751.1| macro domain protein [Escherichia coli 3.3884]
gi|388413731|gb|EIL73721.1| hypothetical protein ECMT8_20968 [Escherichia coli CUMT8]
gi|430900782|gb|ELC22800.1| hypothetical protein WCQ_01033 [Escherichia coli KTE12]
gi|431387000|gb|ELG70953.1| hypothetical protein A1YO_01472 [Escherichia coli KTE136]
gi|431473160|gb|ELH52994.1| hypothetical protein A15G_02285 [Escherichia coli KTE203]
Length = 177
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
KT + + +GDI++ VD IV+ N L+ GG AIH +AGP L AC ++ + Q
Sbjct: 2 KTRIHVVQGDITKLAVD----VIVNAANPSLMGGGGVDGAIHRSAGPALLDACLKVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQY 131
CP G A IT LP V+HTVGPV+ ED +L+ AY N L + AN+
Sbjct: 58 G--DCPTGHAVITLAGALPAKAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVAANSYTS 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 VAFPAISTGV 125
>gi|417235872|ref|ZP_12034691.1| macro domain protein [Escherichia coli 9.0111]
gi|386214825|gb|EII25233.1| macro domain protein [Escherichia coli 9.0111]
Length = 177
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
KT + + +GDI++ VD IV+ N L+ GG AIH AAGP L AC ++ + Q
Sbjct: 2 KTRIHVVQGDITKLAVD----VIVNAANPSLMGGGGVDGAIHRAAGPALLDACLKVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQY 131
CP G A IT LP V+H+VGPV+ ED +L+ AY N L + AN+
Sbjct: 58 G--DCPTGHAVITLAGALPAKAVVHSVGPVWRGGEQNEDQLLQDAYLNSLRLVAANSYTS 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 VAFPAISTGV 125
>gi|295675359|ref|YP_003603883.1| Appr-1-p processing protein [Burkholderia sp. CCGE1002]
gi|295435202|gb|ADG14372.1| Appr-1-p processing domain protein [Burkholderia sp. CCGE1002]
Length = 186
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 69/121 (57%), Gaps = 11/121 (9%)
Query: 22 DISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGE 81
DI+R VD AIV+ N LL GG AIH AAG +L + C + C G+
Sbjct: 19 DITRLAVD----AIVNAANTSLLGGGGVDGAIHRAAGKELLRECETLGG------CATGD 68
Query: 82 ARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCG 140
A+IT G++LP HVIH VGPV+ + E D+L S Y+ L + + + IAFPAISCG
Sbjct: 69 AKITAGYRLPAKHVIHAVGPVWRGGAHGEADLLASCYQRSLEIARETHCTSIAFPAISCG 128
Query: 141 V 141
+
Sbjct: 129 I 129
>gi|302891605|ref|XP_003044684.1| hypothetical protein NECHADRAFT_81503 [Nectria haematococca mpVI
77-13-4]
gi|256725609|gb|EEU38971.1| hypothetical protein NECHADRAFT_81503 [Nectria haematococca mpVI
77-13-4]
Length = 221
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 70/122 (57%), Gaps = 10/122 (8%)
Query: 20 KGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPP 79
+GDI+R +D AIV+ N +L GG AI+ AAGP+L + E+ P
Sbjct: 50 RGDITRLRLD----AIVNAANRLLQGGGGVDGAINAAAGPEL------VRESAPLGPIET 99
Query: 80 GEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISC 139
GEA IT G+ LP HVIHTVGP++ NPE+ L S Y+ L + N ++ +AF AIS
Sbjct: 100 GEAVITKGYNLPAQHVIHTVGPIYREVRNPEESLASCYRESLKLAVQNGLRTVAFSAIST 159
Query: 140 GV 141
G+
Sbjct: 160 GI 161
>gi|167561402|ref|ZP_02354318.1| Appr-1-p processing enzyme family domain protein [Burkholderia
oklahomensis EO147]
Length = 173
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 73/130 (56%), Gaps = 10/130 (7%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ NE LL GG AIH AAGP+L KAC + C G+A++T G++LP
Sbjct: 22 DAIVNAANESLLGGGGVDGAIHRAAGPELVKACATLGG------CVTGDAKLTRGYRLPA 75
Query: 93 SHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCGVSQI---MTHA 148
VIHTVGPV++ E ++L S Y+ L V +AFPAISCGV + A
Sbjct: 76 KFVIHTVGPVWHGGGRGEPELLASCYRRSLEVAAGAGCVSLAFPAISCGVYRFPPDDATA 135
Query: 149 IKLQTNCGFL 158
I ++T G L
Sbjct: 136 IAVRTVVGAL 145
>gi|297627003|ref|YP_003688766.1| hypothetical protein PFREUD_18540 [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
gi|296922768|emb|CBL57346.1| Hypothetical protein PFREUD_18540 [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
Length = 169
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++I +GDI+R VD AIV+ N LL GG AIH A GP + AC Q+
Sbjct: 3 IEIVQGDITRLRVD----AIVNAANSSLLGGGGVDGAIHRAGGPAILAACRQLRATSLPD 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFP 135
P G+A T KLP + VIHTVGPV++ + +L S Y+ CL V + IAFP
Sbjct: 59 GLPAGQAVATTAGKLPATWVIHTVGPVYSRTEDRSALLVSCYRQCLRVADELGVHSIAFP 118
Query: 136 AISCGV 141
IS GV
Sbjct: 119 TISAGV 124
>gi|421727415|ref|ZP_16166577.1| RNase III inhibitor [Klebsiella oxytoca M5al]
gi|410371764|gb|EKP26483.1| RNase III inhibitor [Klebsiella oxytoca M5al]
Length = 153
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 73/134 (54%), Gaps = 6/134 (4%)
Query: 32 SDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLP 91
S IV+ N LL GG AIH AAGP+L AC + + Q CPPG A IT LP
Sbjct: 11 STVIVNAANPSLLGGGGVDGAIHRAAGPELLAACKVVRQQQGE--CPPGHAVITAAGNLP 68
Query: 92 VSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCGVSQIMTHA-- 148
S VIH VGP+++ E ++L AYKN L + ANN + IAFPAIS GV A
Sbjct: 69 ASAVIHAVGPIWHGGDRQEAELLADAYKNSLLLASANNYRSIAFPAISTGVYGYPKEAAA 128
Query: 149 -IKLQTNCGFLESF 161
I ++T FL +
Sbjct: 129 EIAVRTVNAFLTRY 142
>gi|237730978|ref|ZP_04561459.1| conserved hypothetical protein [Citrobacter sp. 30_2]
gi|226906517|gb|EEH92435.1| conserved hypothetical protein [Citrobacter sp. 30_2]
Length = 180
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 71/129 (55%), Gaps = 7/129 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
++ + + +GDI+ VD IV+ N LL GG AIH AAGP L +AC Q+ + Q
Sbjct: 2 QSRVHVLQGDITTIAVD----VIVNAANSSLLGGGGVDGAIHRAAGPALSEACKQVIQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
CP G A IT LP VIHTVGPV+ + E + L AY N L + AN Q
Sbjct: 58 G--ECPTGHAVITLAGALPAKAVIHTVGPVWQGGDHHEAERLEEAYLNTLQLALANGYQS 115
Query: 132 IAFPAISCG 140
IAFPAIS G
Sbjct: 116 IAFPAISTG 124
>gi|333979646|ref|YP_004517591.1| Appr-1-p processing domain-containing protein [Desulfotomaculum
kuznetsovii DSM 6115]
gi|333823127|gb|AEG15790.1| Appr-1-p processing domain protein [Desulfotomaculum kuznetsovii
DSM 6115]
Length = 185
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 76/128 (59%), Gaps = 7/128 (5%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T L++ GDI++ + ++AIV+ N L+ GG AIH A GP + + C QI Q
Sbjct: 8 TLLRLMVGDITQ----QDTEAIVNAANSSLMGGGGVDGAIHRAGGPQILEECKQIVARQG 63
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYI 132
+ P G+A IT G KL +VIHTVGP+++ ED +L +AY N LS+ + I+ I
Sbjct: 64 SL--PTGQAVITTGGKLKARYVIHTVGPIWSGGNRGEDELLHNAYYNSLSLAREKGIKSI 121
Query: 133 AFPAISCG 140
+FP+IS G
Sbjct: 122 SFPSISTG 129
>gi|167568629|ref|ZP_02361503.1| Appr-1-p processing enzyme family domain protein [Burkholderia
oklahomensis C6786]
Length = 173
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 66/112 (58%), Gaps = 7/112 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ NE LL GG AIH AAGP+L KAC + C G+A++T G++LP
Sbjct: 22 DAIVNAANESLLGGGGVDGAIHRAAGPELVKACATLGG------CVTGDAKLTHGYRLPA 75
Query: 93 SHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCGVSQ 143
VIHTVGPV++ E ++L S Y+ L V +AFPAISCGV +
Sbjct: 76 KFVIHTVGPVWHGGARGEPELLASCYRRSLEVAAGAGCVSLAFPAISCGVYR 127
>gi|226945974|ref|YP_002801047.1| Appr-1-p processing protein [Azotobacter vinelandii DJ]
gi|226720901|gb|ACO80072.1| Appr-1-p processing protein [Azotobacter vinelandii DJ]
Length = 167
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 76/125 (60%), Gaps = 11/125 (8%)
Query: 18 ISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRC 77
+ +GD++ VD A+V+ N LL GG AIH AAGP L AC ++ C
Sbjct: 5 VWQGDLTNLAVD----AVVNAANPGLLGGGGVDGAIHRAAGPGLLAACRRLGG------C 54
Query: 78 PPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPA 136
P GEAR+TPGF+LP +VIHTVGPV+ E ++L + Y+N L + + + + IAFPA
Sbjct: 55 PTGEARLTPGFRLPARYVIHTVGPVWLGGGQGEAELLAACYRNSLDLAERHALTNIAFPA 114
Query: 137 ISCGV 141
ISCG+
Sbjct: 115 ISCGI 119
>gi|345890695|ref|ZP_08841560.1| hypothetical protein HMPREF1022_00220 [Desulfovibrio sp.
6_1_46AFAA]
gi|345049049|gb|EGW52868.1| hypothetical protein HMPREF1022_00220 [Desulfovibrio sp.
6_1_46AFAA]
Length = 182
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 77/127 (60%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L+I +GDI+R VD A+V+ NE LL GG AIH AAGP+L C +P
Sbjct: 8 LRIMEGDITRQAVD----AVVNAANEGLLGGGGVDGAIHRAAGPELLAVC------RPLG 57
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
CP GEA++TPGF+LP +VIHTVGPV+ + E +L SAY+ L A + +AF
Sbjct: 58 GCPTGEAKVTPGFRLPARYVIHTVGPVWRGGTHGEARLLASAYRRSLEEAVAVKARVVAF 117
Query: 135 PAISCGV 141
PAIS GV
Sbjct: 118 PAISTGV 124
>gi|417288525|ref|ZP_12075810.1| macro domain protein [Escherichia coli TW07793]
gi|386247317|gb|EII93490.1| macro domain protein [Escherichia coli TW07793]
Length = 177
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
KT + + +GDI++ VD IV+ N L+ GG AIH AGP L AC ++ + Q
Sbjct: 2 KTRIHVVQGDITKLAVD----VIVNAANPSLMGGGGVDGAIHRVAGPALLDACLKVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQY 131
CP G A IT LP V+HTVGPV+ ED +L+ AY N L + AN+
Sbjct: 58 G--DCPTGHAVITLAGDLPAKAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVAANSYTS 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 VAFPAISTGV 125
>gi|187730705|ref|YP_001880784.1| hypothetical protein SbBS512_E2286 [Shigella boydii CDC 3083-94]
gi|187427697|gb|ACD06971.1| appr-1-p processing enzyme domain protein [Shigella boydii CDC
3083-94]
Length = 177
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
KT + + +GDI++ VD IV+ N L+ GG AIH AAGP L AC ++ + Q
Sbjct: 2 KTRIHVVQGDITKLAVD----VIVNAANPSLMGGGGVDGAIHRAAGPALLDACLKVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQY 131
CP G IT LP V+HTVGPV+ ED +L+ AY N L + AN+
Sbjct: 58 G--DCPTGHTVITLAGDLPAKAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVAANSYTS 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 VAFPAISTGV 125
>gi|434384413|ref|YP_007095024.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Chamaesiphon minutus PCC 6605]
gi|428015403|gb|AFY91497.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Chamaesiphon minutus PCC 6605]
Length = 179
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 72/137 (52%), Gaps = 5/137 (3%)
Query: 28 VDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPG 87
V+++ DAIV+ N L GG AIH AAG L + C +P + RCP GEARIT
Sbjct: 20 VEQNVDAIVNAANTKLKGGGGVDGAIHRAAGSTLLEECLALPIDERGQRCPTGEARITSA 79
Query: 88 FKLPVSHVIHTVGPVFN--FHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQIM 145
L +VIHTVGP FN ++ +L AY + L + + IAFP+IS G +
Sbjct: 80 GNLSAKYVIHTVGPFFNQKYYDKSVSLLEKAYLSSLILANDRKCRSIAFPSISTGAYRFP 139
Query: 146 THA---IKLQTNCGFLE 159
A I LQT FL+
Sbjct: 140 IEAAAKIALQTTIDFLQ 156
>gi|296102941|ref|YP_003613087.1| hypothetical protein ECL_02595 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|334351226|sp|D5CE05.1|YMDB_ENTCC RecName: Full=O-acetyl-ADP-ribose deacetylase; AltName:
Full=Regulator of RNase III activity
gi|295057400|gb|ADF62138.1| hypothetical protein ECL_02595 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 180
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 70/130 (53%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K + + GDI+ VD IV+ N L+ GG AIH AAGP L +AC + + Q
Sbjct: 2 KPQIDVIHGDITTMHVD----VIVNAANPSLMGGGGVDGAIHRAAGPQLLEACKTVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
CPPG A IT LP VIH VGP+++ E IL AY+NCL + N +
Sbjct: 58 G--ECPPGHAVITLAGDLPAKAVIHAVGPIWHGGDRHEASILEEAYRNCLRLAADNGYKT 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 MAFPAISTGV 125
>gi|126439149|ref|YP_001057536.1| hypothetical protein BURPS668_0484 [Burkholderia pseudomallei 668]
gi|126218642|gb|ABN82148.1| conserved hypothetical protein [Burkholderia pseudomallei 668]
Length = 177
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 71/130 (54%), Gaps = 10/130 (7%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAGP+L K C + C G+A++T G++LP
Sbjct: 22 DAIVNAANASLLGGGGVDGAIHRAAGPELVKECATLGG------CATGDAKLTRGYRLPA 75
Query: 93 SHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCGVSQI---MTHA 148
+VIHTVGPV+ E ++L S Y+ L V IAFPAISCGV + A
Sbjct: 76 KYVIHTVGPVWRGGGRGEAELLASCYRRSLEVAAGAGCASIAFPAISCGVYRFPPADATA 135
Query: 149 IKLQTNCGFL 158
I ++T G L
Sbjct: 136 IAVRTMAGAL 145
>gi|167750180|ref|ZP_02422307.1| hypothetical protein EUBSIR_01149 [Eubacterium siraeum DSM 15702]
gi|167656923|gb|EDS01053.1| macro domain protein [Eubacterium siraeum DSM 15702]
Length = 355
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 72/127 (56%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
LKI + DI+++ DA+V+ NE LL GG AIH AAG +L K C +
Sbjct: 3 LKIVRADITKF----PCDAVVNAANESLLGGGGVDGAIHRAAGEELYKECLALG------ 52
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C GEA+IT G K+P ++IHTVGP++ + +L S Y+N LS+ N + +AF
Sbjct: 53 GCRTGEAKITSGCKMPCRYIIHTVGPIWRGGDFGEKQLLESCYRNSLSLALKNGCESVAF 112
Query: 135 PAISCGV 141
P IS GV
Sbjct: 113 PMISAGV 119
>gi|431792359|ref|YP_007219264.1| phosphatase, C-terminal domain of histone macro H2A1 like protein
[Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430782585|gb|AGA67868.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Desulfitobacterium dichloroeliminans LMG
P-21439]
Length = 337
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 74/126 (58%), Gaps = 11/126 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L+I + DI++ +DAIV+ + LL GG AIH AAGP+L C +
Sbjct: 3 LEIIRNDITKVL----ADAIVNAADPSLLGGGGVDGAIHRAAGPELLAECRTLGG----- 53
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFN-FHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C G+A++T G+ LP +VIHTVGPV+ H + E +L +Y+N L++ + N++ IAF
Sbjct: 54 -CQVGQAKLTKGYNLPAKYVIHTVGPVWQGGHKDEEKLLTDSYRNSLALAQEYNLESIAF 112
Query: 135 PAISCG 140
P IS G
Sbjct: 113 PLISAG 118
>gi|187779091|ref|ZP_02995564.1| hypothetical protein CLOSPO_02686 [Clostridium sporogenes ATCC
15579]
gi|187772716|gb|EDU36518.1| macro domain protein [Clostridium sporogenes ATCC 15579]
Length = 180
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 73/135 (54%), Gaps = 7/135 (5%)
Query: 8 LSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQ 67
+S S +KI KGDI++ VD AIV+ N LL GG AIH A G + + C
Sbjct: 1 MSISYINKIKIIKGDITKENVD----AIVNAANSSLLGGGGVDGAIHRAGGNKILEECRS 56
Query: 68 IPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNF-HCNPEDILRSAYKNCLSVGKA 126
I ++ GEA IT G L +VIHTVGP+++ N E L +AYKN L +
Sbjct: 57 IVSKIGSLKT--GEAVITSGGNLKAKYVIHTVGPIWHGGKSNEETFLANAYKNSLKLSSE 114
Query: 127 NNIQYIAFPAISCGV 141
NI+ IAFP IS GV
Sbjct: 115 KNIKTIAFPNISTGV 129
>gi|419012706|ref|ZP_13560067.1| hypothetical protein ECDEC1D_1551 [Escherichia coli DEC1D]
gi|377860822|gb|EHU25644.1| hypothetical protein ECDEC1D_1551 [Escherichia coli DEC1D]
Length = 177
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
KT + + +GDI++ VD IV+ N + GG AIH AAGP L AC ++ + Q
Sbjct: 2 KTRIHVVQGDITKLAVD----VIVNAANPSFMGGGGVDGAIHRAAGPALLDACLKVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQY 131
CP G A IT LP V+HTVGPV+ ED +L+ AY N L + AN+
Sbjct: 58 G--DCPTGHAVITLAGDLPAKAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVAANSYTS 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 VAFPAISTGV 125
>gi|198433170|ref|XP_002123667.1| PREDICTED: similar to MACRO domain containing 2 [Ciona
intestinalis]
Length = 571
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 79/141 (56%), Gaps = 16/141 (11%)
Query: 3 FKVQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGG--FTAAAIHEAAGPD 60
+K+ ++ S +K+ K DI+ VD AIVS TN L+ GG AIH+ AG
Sbjct: 382 YKLYVVNKSINKKVKLVKADITTLKVD----AIVSATNTSLIPGGGNHVDDAIHKVAGEG 437
Query: 61 LQKACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNC 120
L +AC ++ CP GEA+ITPGF L HVIHTVGPV D L+SAY +C
Sbjct: 438 LLQACIKLS------GCPVGEAKITPGFNLLAKHVIHTVGPVGMV----RDKLQSAYIHC 487
Query: 121 LSVGKANNIQYIAFPAISCGV 141
L + + ++ IAFP IS G+
Sbjct: 488 LKLVLDHGLKSIAFPCISTGM 508
>gi|76811843|ref|YP_332081.1| Appr-1-p processing enzyme family protein [Burkholderia
pseudomallei 1710b]
gi|126450136|ref|YP_001082364.1| hypothetical protein BMA10247_2844 [Burkholderia mallei NCTC 10247]
gi|126454783|ref|YP_001064785.1| hypothetical protein BURPS1106A_0502 [Burkholderia pseudomallei
1106a]
gi|167822557|ref|ZP_02454028.1| hypothetical protein Bpseu9_02694 [Burkholderia pseudomallei 9]
gi|167892644|ref|ZP_02480046.1| hypothetical protein Bpse7_02694 [Burkholderia pseudomallei 7894]
gi|167917388|ref|ZP_02504479.1| hypothetical protein BpseBC_02479 [Burkholderia pseudomallei
BCC215]
gi|226193713|ref|ZP_03789316.1| Appr-1-p processing enzyme family protein [Burkholderia
pseudomallei Pakistan 9]
gi|242316400|ref|ZP_04815416.1| Appr-1-p processing enzyme family protein [Burkholderia
pseudomallei 1106b]
gi|254174805|ref|ZP_04881466.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
gi|254196675|ref|ZP_04903099.1| conserved hypothetical protein [Burkholderia pseudomallei S13]
gi|254296005|ref|ZP_04963462.1| conserved hypothetical protein [Burkholderia pseudomallei 406e]
gi|254357589|ref|ZP_04973863.1| Appr-1-p processing enzyme family protein [Burkholderia mallei
2002721280]
gi|403517153|ref|YP_006651286.1| hypothetical protein BPC006_I0487 [Burkholderia pseudomallei
BPC006]
gi|76581296|gb|ABA50771.1| Appr-1-p processing enzyme family protein homolog [Burkholderia
pseudomallei 1710b]
gi|126228425|gb|ABN91965.1| Appr-1-p processing enzyme family protein [Burkholderia
pseudomallei 1106a]
gi|126243006|gb|ABO06099.1| conserved hypothetical protein [Burkholderia mallei NCTC 10247]
gi|148026653|gb|EDK84738.1| Appr-1-p processing enzyme family protein [Burkholderia mallei
2002721280]
gi|157805804|gb|EDO82974.1| conserved hypothetical protein [Burkholderia pseudomallei 406e]
gi|160695850|gb|EDP85820.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
gi|169653418|gb|EDS86111.1| conserved hypothetical protein [Burkholderia pseudomallei S13]
gi|225934291|gb|EEH30275.1| Appr-1-p processing enzyme family protein [Burkholderia
pseudomallei Pakistan 9]
gi|242139639|gb|EES26041.1| Appr-1-p processing enzyme family protein [Burkholderia
pseudomallei 1106b]
gi|403072797|gb|AFR14377.1| hypothetical protein BPC006_I0487 [Burkholderia pseudomallei
BPC006]
Length = 188
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 72/130 (55%), Gaps = 10/130 (7%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAGP+L K C + C G+A++T G++LP
Sbjct: 33 DAIVNAANASLLGGGGVDGAIHRAAGPELVKECATLGG------CATGDAKLTRGYRLPA 86
Query: 93 SHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCGVSQI---MTHA 148
+VIHTVGPV+ + E ++L S Y+ L V IAFPAISCGV + A
Sbjct: 87 KYVIHTVGPVWRGGGHGEAELLASCYRRSLEVAAGAGCASIAFPAISCGVYRFPPADATA 146
Query: 149 IKLQTNCGFL 158
I ++T G L
Sbjct: 147 IAVRTVAGAL 156
>gi|357058189|ref|ZP_09119043.1| hypothetical protein HMPREF9334_00760 [Selenomonas infelix ATCC
43532]
gi|355374042|gb|EHG21343.1| hypothetical protein HMPREF9334_00760 [Selenomonas infelix ATCC
43532]
Length = 180
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 73/131 (55%), Gaps = 10/131 (7%)
Query: 11 STKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPE 70
++K + GDI+ VD AIV+ N LL GG AIH AAG +L C +
Sbjct: 7 ASKNEIVYFVGDITTLAVD----AIVNAANCSLLGGGGVDGAIHRAAGRELLAECRTLGG 62
Query: 71 AQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQ 130
C G A+IT G+ LP +VIHTVGPV++ + ++LRS Y N L++ + + +
Sbjct: 63 ------CATGAAKITKGYHLPAHYVIHTVGPVYSGSTSDAELLRSCYWNSLALARTHGLH 116
Query: 131 YIAFPAISCGV 141
IAFPAIS GV
Sbjct: 117 TIAFPAISTGV 127
>gi|403412086|emb|CCL98786.1| predicted protein [Fibroporia radiculosa]
Length = 235
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 83/163 (50%), Gaps = 21/163 (12%)
Query: 8 LSFSTKTSL----KISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQK 63
L F K SL + +GDI+ VD IV+ N LL GG AIH AAGP+L +
Sbjct: 28 LRFQAKASLLDRVSLFQGDITELEVD----GIVNAANRSLLGGGGVDGAIHAAAGPELLE 83
Query: 64 ACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVF--NFHCNPEDILRSAYKNCL 121
C + C G+A++T + LP H+IH VGPV+ N L S YK L
Sbjct: 84 ECRTLDG------CDTGDAKMTKAYNLPSQHIIHAVGPVYSRNHVETKASQLESCYKRSL 137
Query: 122 SVGKANNIQYIAFPAISCGVS----QIMTHAIKLQTNCGFLES 160
+ N++++IAFP+IS G+ + TH I L T FL+S
Sbjct: 138 QIAADNSLRHIAFPSISTGIYGYPIEDATH-IALSTTRAFLDS 179
>gi|386812381|ref|ZP_10099606.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386404651|dbj|GAB62487.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 187
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 75/128 (58%), Gaps = 11/128 (8%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
++L++ +GDI+ + +DAIV+ N LL GG AIH A GP + + C ++
Sbjct: 9 STLELVEGDITL----QETDAIVNAANTSLLGGGGVDGAIHRAGGPKILEECKKLG---- 60
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
CP GEARIT G L +VIHTVGP++ E ++L AYKN L++ + ++ I
Sbjct: 61 --GCPTGEARITTGGDLKARYVIHTVGPMYRHGKKGEAELLAHAYKNSLTLASQHKLKSI 118
Query: 133 AFPAISCG 140
+FP+IS G
Sbjct: 119 SFPSISTG 126
>gi|291543654|emb|CBL16763.1| Predicted phosphatase homologous to the C-terminal domain of
histone macroH2A1 [Ruminococcus champanellensis 18P13]
Length = 339
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 72/127 (56%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L+I + DI++ +DAIV+ N LL G IH AAGP+L AC +
Sbjct: 3 LQIIRQDITQM----KTDAIVNAANSTLLGGRGVDGCIHRAAGPELLNACKALGG----- 53
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFN-FHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
CP GEARITPGF+L ++IHTVGP++ H +L+S Y+N L++ + + IAF
Sbjct: 54 -CPTGEARITPGFRLSCKYIIHTVGPLWQGGHAGEPALLKSCYRNALTLALEHGCRSIAF 112
Query: 135 PAISCGV 141
P IS G
Sbjct: 113 PLISAGA 119
>gi|392978515|ref|YP_006477103.1| hypothetical protein A3UG_08300 [Enterobacter cloacae subsp.
dissolvens SDM]
gi|392324448|gb|AFM59401.1| hypothetical protein A3UG_08300 [Enterobacter cloacae subsp.
dissolvens SDM]
Length = 180
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 70/130 (53%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K + + GDI+ VD IV+ N L+ GG AIH AAGP L +AC + + Q
Sbjct: 2 KPQIDVIHGDITTMHVD----VIVNAANPSLMGGGGVDGAIHRAAGPQLLEACKTVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
CPPG A IT LP VIH VGPV++ E +L AY+NCL + N +
Sbjct: 58 G--ECPPGHAVITLAGDLPAKAVIHAVGPVWHGGDRHEASLLEEAYRNCLRLAADNGYKT 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 MAFPAISTGV 125
>gi|432805167|ref|ZP_20039108.1| hypothetical protein A1WA_01068 [Escherichia coli KTE91]
gi|432933605|ref|ZP_20133273.1| hypothetical protein A13E_02421 [Escherichia coli KTE184]
gi|433193076|ref|ZP_20377084.1| hypothetical protein WGU_01393 [Escherichia coli KTE90]
gi|431356779|gb|ELG43469.1| hypothetical protein A1WA_01068 [Escherichia coli KTE91]
gi|431455247|gb|ELH35603.1| hypothetical protein A13E_02421 [Escherichia coli KTE184]
gi|431719144|gb|ELJ83204.1| hypothetical protein WGU_01393 [Escherichia coli KTE90]
Length = 177
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
KT + + +GDI++ VD IV+ N L+ GG AIH AAGP + AC ++ + Q
Sbjct: 2 KTCIHVVQGDITKLAVD----VIVNAANPSLMGGGGVDGAIHRAAGPAMLDACLKVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQY 131
CP G A IT LP V+HTVGPV+ ED +L+ AY N L + AN+
Sbjct: 58 G--DCPTGHAVITLAGALPAKAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVAANSYTS 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 VAFPAISTGV 125
>gi|443898985|dbj|GAC76318.1| hismacro and SEC14 domain-containing proteins [Pseudozyma
antarctica T-34]
Length = 220
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 70/128 (54%), Gaps = 12/128 (9%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L + GDI+ VD AIV+ N LL GG AIH AAGP L C ++
Sbjct: 38 LSVHCGDITTLEVD----AIVNAANTSLLGGGGVDGAIHRAAGPSLLAECRKLNG----- 88
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFH--CNPEDILRSAYKNCLSVGKANNIQYIA 133
C GEA++T + LP HVIHTVGPV++ H E +LR+AY N L + + IA
Sbjct: 89 -CKTGEAKLTAAYDLPAKHVIHTVGPVYSSHDPARAETLLRNAYNNSLEECRKAGGRSIA 147
Query: 134 FPAISCGV 141
FP+IS GV
Sbjct: 148 FPSISTGV 155
>gi|432361784|ref|ZP_19604967.1| hypothetical protein WCE_00809 [Escherichia coli KTE5]
gi|430889244|gb|ELC11912.1| hypothetical protein WCE_00809 [Escherichia coli KTE5]
Length = 177
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
KT + + +GDI++ VD IV+ N L+ GG AIH AAGP L AC ++ + Q
Sbjct: 2 KTRIHVVQGDITKLAVD----VIVNAANPSLMGGGGVDGAIHRAAGPALLDACLKVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQY 131
CP G A IT LP V+HTVGPV+ ED +L+ A+ N L + AN+
Sbjct: 58 G--DCPTGHAVITLAGDLPAKAVVHTVGPVWRGGEQNEDQLLQDAHLNSLRLVAANSYTS 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 VAFPAISTGV 125
>gi|255067830|ref|ZP_05319685.1| RNase III regulator YmdB [Neisseria sicca ATCC 29256]
gi|255047921|gb|EET43385.1| RNase III regulator YmdB [Neisseria sicca ATCC 29256]
Length = 173
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 74/127 (58%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++ +GDI++ VD AIV+ N LL GG AIH AAG +L +AC ++
Sbjct: 4 FEVVEGDITKLEVD----AIVNAANASLLGGGGVDGAIHRAAGRELLEACRKLNG----- 54
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPV-FNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C GEA+IT G++LP VIHTVGPV F H + L AY+N L + + + I+ IAF
Sbjct: 55 -CRTGEAKITQGYRLPAKFVIHTVGPVWFGGHRSEAVKLAEAYRNSLLLAQEHGIRSIAF 113
Query: 135 PAISCGV 141
P IS GV
Sbjct: 114 PCISTGV 120
>gi|332029791|gb|EGI69660.1| MACRO domain-containing protein 2 [Acromyrmex echinatior]
Length = 229
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 74/139 (53%), Gaps = 19/139 (13%)
Query: 12 TKTSLKISKGD------ISRWCVDRSS---DAIVSPTNEILLLGGFTAAAIHEAAGPDLQ 62
TKT K K D + W D +S DAIV+ N LL GG AIH AAGP L+
Sbjct: 47 TKTVEKAEKVDETLAKKVCMWQGDITSLEIDAIVNAANSSLLGGGGVDGAIHRAAGPYLR 106
Query: 63 KACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLS 122
K C + C GEA+IT G++LP ++IHTVGP D L+ Y+N L+
Sbjct: 107 KECATLK------GCKVGEAKITGGYELPAKYIIHTVGP----QGEKPDKLKECYENSLT 156
Query: 123 VGKANNIQYIAFPAISCGV 141
+ K N ++ IAFP IS G+
Sbjct: 157 LAKENRLRTIAFPCISTGI 175
>gi|323485330|ref|ZP_08090679.1| appr-1-p processing [Clostridium symbiosum WAL-14163]
gi|355625481|ref|ZP_09048262.1| hypothetical protein HMPREF1020_02341 [Clostridium sp. 7_3_54FAA]
gi|323401366|gb|EGA93715.1| appr-1-p processing [Clostridium symbiosum WAL-14163]
gi|354821305|gb|EHF05695.1| hypothetical protein HMPREF1020_02341 [Clostridium sp. 7_3_54FAA]
Length = 169
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 72/128 (56%), Gaps = 11/128 (8%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
S KI GDI++ + AIV+ N LL GG AIH AAGP+L C +
Sbjct: 2 SFKIITGDITKC----ETTAIVNAANTSLLGGGGVDGAIHRAAGPELLGECRMLRG---- 53
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHC-NPEDILRSAYKNCLSVGKANNIQYIA 133
C G+A+IT G+KL ++IHT GPV+ N ++L S Y++CL + +NI IA
Sbjct: 54 --CKTGQAKITKGYKLKAEYIIHTPGPVWQDGAHNERELLESCYRSCLELALKHNIHEIA 111
Query: 134 FPAISCGV 141
FP+IS G+
Sbjct: 112 FPSISTGI 119
>gi|119490709|ref|XP_001263077.1| LRP16 family protein [Neosartorya fischeri NRRL 181]
gi|119411237|gb|EAW21180.1| LRP16 family protein [Neosartorya fischeri NRRL 181]
Length = 354
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 66/114 (57%), Gaps = 11/114 (9%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
D IV+ NE LL GG AIH AAGPDL + C + C G+A+IT ++LP
Sbjct: 55 DCIVNAANESLLGGGGVDGAIHRAAGPDLLRECRTL------KGCRTGDAKITSAYELPC 108
Query: 93 SHVIHTVGPVFNFHC-----NPEDILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
VIHTVGP+++F PE +LRS Y+ L + N+++ IAF AIS GV
Sbjct: 109 KKVIHTVGPIYHFELPKGDDRPEMLLRSCYRRSLELAVENDMKSIAFAAISTGV 162
>gi|323694090|ref|ZP_08108269.1| appr-1-p processing domain-containing protein [Clostridium
symbiosum WAL-14673]
gi|323501807|gb|EGB17690.1| appr-1-p processing domain-containing protein [Clostridium
symbiosum WAL-14673]
Length = 169
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 72/128 (56%), Gaps = 11/128 (8%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
S KI GDI++ + AIV+ N LL GG AIH AAGP+L C +
Sbjct: 2 SFKIITGDITKC----ETTAIVNAANTSLLGGGGVDGAIHRAAGPELLGECRMLRG---- 53
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHC-NPEDILRSAYKNCLSVGKANNIQYIA 133
C G+A+IT G+KL ++IHT GPV+ N ++L S Y++CL + +NI IA
Sbjct: 54 --CKTGQAKITKGYKLKAEYIIHTPGPVWQDGAHNERELLESCYRSCLELALKHNIHEIA 111
Query: 134 FPAISCGV 141
FP+IS G+
Sbjct: 112 FPSISTGI 119
>gi|410463320|ref|ZP_11316845.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Desulfovibrio magneticus str. Maddingley MBC34]
gi|409983566|gb|EKO39930.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Desulfovibrio magneticus str. Maddingley MBC34]
Length = 188
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 77/135 (57%), Gaps = 9/135 (6%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+L++ +GDI+ VD ++DAIV+ N L GG AIH AAGP L AC I R
Sbjct: 13 TLRLIEGDIT---VD-TADAIVNAANSALAGGGGVDGAIHRAAGPKLPAACRDI---IAR 65
Query: 75 V-RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
+ P G A IT GF+LP H+IHTVGP++ E + LRSAY ++ N++ +
Sbjct: 66 IGSLPAGGAVITAGFELPARHIIHTVGPIWRGGDQGEPEALRSAYAESINRAVENHLAVV 125
Query: 133 AFPAISCGVSQIMTH 147
AFPA+S GV H
Sbjct: 126 AFPAVSTGVYGYPVH 140
>gi|365105867|ref|ZP_09334916.1| UPF0189 protein ymdB [Citrobacter freundii 4_7_47CFAA]
gi|363643049|gb|EHL82380.1| UPF0189 protein ymdB [Citrobacter freundii 4_7_47CFAA]
Length = 180
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 71/129 (55%), Gaps = 7/129 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
++ + + +GDI+ VD IV+ N LL GG AIH AAGP L +AC Q+ + Q
Sbjct: 2 QSRVHVLQGDITTIAVD----VIVNAANSSLLGGGGVDGAIHRAAGPALLEACKQVIQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
CP G A IT LP VIHTVGPV+ + E + L AY N L + AN Q
Sbjct: 58 G--ECPTGHAVITLAGALPAKAVIHTVGPVWQGGDHHEAERLEEAYLNTLQLALANGYQS 115
Query: 132 IAFPAISCG 140
IAFPAIS G
Sbjct: 116 IAFPAISTG 124
>gi|342889553|gb|EGU88591.1| hypothetical protein FOXB_00840 [Fusarium oxysporum Fo5176]
Length = 222
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 9 SFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQI 68
S S + + +GDI++ +D AIV+ N LL GG AIH AAG DL K C +
Sbjct: 40 SDSINKRIGLIRGDITKLRLD----AIVNAANRSLLGGGGVDGAIHRAAGTDLVKECKTL 95
Query: 69 PEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANN 128
GEA IT G+ LP HVIHTVGPV+ NP + L + Y+ L + N
Sbjct: 96 GPINT------GEAVITKGYNLPSKHVIHTVGPVYAADANPSESLANCYRESLKLAVKNG 149
Query: 129 IQYIAFPAISCGV---SQIMTHAIKLQTNCGFLES 160
+ I F AIS GV + I +T FLES
Sbjct: 150 VTTIGFSAISTGVYGFPNLPAAKIACRTVREFLES 184
>gi|383770799|ref|YP_005449862.1| hypothetical protein S23_25370 [Bradyrhizobium sp. S23321]
gi|381358920|dbj|BAL75750.1| hypothetical protein S23_25370 [Bradyrhizobium sp. S23321]
Length = 183
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 66/112 (58%), Gaps = 7/112 (6%)
Query: 31 SSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKL 90
S DAIV+ N LL GG AIH AAGPDL C + C G+ARIT G++L
Sbjct: 24 SVDAIVNAANTSLLGGGGVDGAIHRAAGPDLVAECRTLHG------CKTGDARITKGYRL 77
Query: 91 PVSHVIHTVGPVFNFHC-NPEDILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
+HVIHTVGPV+N +D+L S Y+ + + + + + +AFPAIS GV
Sbjct: 78 KAAHVIHTVGPVWNGGTLGEDDLLASCYRRSMELCREHELTSVAFPAISTGV 129
>gi|227508384|ref|ZP_03938433.1| appr-1-p processing domain protein [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227511383|ref|ZP_03941432.1| appr-1-p processing domain protein [Lactobacillus buchneri ATCC
11577]
gi|227523590|ref|ZP_03953639.1| appr-1-p processing domain protein [Lactobacillus hilgardii ATCC
8290]
gi|227085334|gb|EEI20646.1| appr-1-p processing domain protein [Lactobacillus buchneri ATCC
11577]
gi|227089250|gb|EEI24562.1| appr-1-p processing domain protein [Lactobacillus hilgardii ATCC
8290]
gi|227192034|gb|EEI72101.1| appr-1-p processing domain protein [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 167
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 73/127 (57%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L + KGDI++ VD AIV+ N L GG AIH AAGP L +AC ++
Sbjct: 4 LNVIKGDITKVNVD----AIVNAANRALSGGGGVDGAIHRAAGPQLDEACRKLNG----- 54
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFN-FHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
CP G+A+ TPGF LP ++IHT GP+++ N +L+ +Y N L ++ Q +AF
Sbjct: 55 -CPTGQAKTTPGFNLPAKYIIHTPGPIWHGGQRNEPQLLKDSYVNSLKQAVLHHCQTVAF 113
Query: 135 PAISCGV 141
P+IS G+
Sbjct: 114 PSISTGI 120
>gi|254412742|ref|ZP_05026515.1| Appr-1-p processing enzyme family protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196180477|gb|EDX75468.1| Appr-1-p processing enzyme family protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 176
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 71/126 (56%), Gaps = 11/126 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ + +GDI++ VD AIV+ N LL GG AIH AAGP L C +
Sbjct: 6 INVIEGDITQLSVD----AIVNAANTSLLGGGGVDGAIHCAAGPGLLAECRGLN------ 55
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAF 134
C G+A+IT G+ LP VIHTVGPV+ + ED +L S Y L + K NNI+ IAF
Sbjct: 56 GCETGDAKITQGYNLPADWVIHTVGPVWRDGNHGEDALLASCYYRSLELAKQNNIRNIAF 115
Query: 135 PAISCG 140
PAIS G
Sbjct: 116 PAISTG 121
>gi|53718087|ref|YP_107073.1| Appr-1-p processing enzyme family protein [Burkholderia
pseudomallei K96243]
gi|53724521|ref|YP_104679.1| hypothetical protein BMA3203 [Burkholderia mallei ATCC 23344]
gi|121600907|ref|YP_991527.1| hypothetical protein BMASAVP1_A0175 [Burkholderia mallei SAVP1]
gi|124385276|ref|YP_001027399.1| hypothetical protein BMA10229_A1417 [Burkholderia mallei NCTC
10229]
gi|134279942|ref|ZP_01766654.1| Appr-1-p processing enzyme family protein [Burkholderia
pseudomallei 305]
gi|167717913|ref|ZP_02401149.1| hypothetical protein BpseD_02776 [Burkholderia pseudomallei DM98]
gi|167814037|ref|ZP_02445717.1| hypothetical protein Bpse9_02781 [Burkholderia pseudomallei 91]
gi|167844139|ref|ZP_02469647.1| hypothetical protein BpseB_02537 [Burkholderia pseudomallei B7210]
gi|217420320|ref|ZP_03451826.1| Appr-1-p processing enzyme family protein [Burkholderia
pseudomallei 576]
gi|238563021|ref|ZP_04610351.1| appr-1-p processing enzyme family domain protein [Burkholderia
mallei GB8 horse 4]
gi|251767569|ref|ZP_02267757.2| Appr-1-p processing enzyme family protein [Burkholderia mallei
PRL-20]
gi|254181945|ref|ZP_04888542.1| conserved hypothetical protein [Burkholderia pseudomallei 1655]
gi|254201773|ref|ZP_04908137.1| Appr-1-p processing enzyme family protein [Burkholderia mallei FMH]
gi|254258994|ref|ZP_04950048.1| Appr-1-p processing enzyme family protein [Burkholderia
pseudomallei 1710a]
gi|386863091|ref|YP_006276040.1| Appr-1-p processing enzyme family protein [Burkholderia
pseudomallei 1026b]
gi|418392555|ref|ZP_12968321.1| Appr-1-p processing enzyme family protein [Burkholderia
pseudomallei 354a]
gi|418537759|ref|ZP_13103394.1| Appr-1-p processing enzyme family protein [Burkholderia
pseudomallei 1026a]
gi|418542078|ref|ZP_13107534.1| Appr-1-p processing enzyme family protein [Burkholderia
pseudomallei 1258a]
gi|418548404|ref|ZP_13113518.1| Appr-1-p processing enzyme family protein [Burkholderia
pseudomallei 1258b]
gi|418554519|ref|ZP_13119302.1| Appr-1-p processing enzyme family protein [Burkholderia
pseudomallei 354e]
gi|52208501|emb|CAH34436.1| Appr-1-p processing enzyme family protein [Burkholderia
pseudomallei K96243]
gi|52427944|gb|AAU48537.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344]
gi|121229717|gb|ABM52235.1| conserved hypothetical protein [Burkholderia mallei SAVP1]
gi|124293296|gb|ABN02565.1| conserved hypothetical protein [Burkholderia mallei NCTC 10229]
gi|134249142|gb|EBA49224.1| Appr-1-p processing enzyme family protein [Burkholderia
pseudomallei 305]
gi|147747667|gb|EDK54743.1| Appr-1-p processing enzyme family protein [Burkholderia mallei FMH]
gi|184212483|gb|EDU09526.1| conserved hypothetical protein [Burkholderia pseudomallei 1655]
gi|217397624|gb|EEC37640.1| Appr-1-p processing enzyme family protein [Burkholderia
pseudomallei 576]
gi|238521503|gb|EEP84954.1| appr-1-p processing enzyme family domain protein [Burkholderia
mallei GB8 horse 4]
gi|243062292|gb|EES44478.1| Appr-1-p processing enzyme family protein [Burkholderia mallei
PRL-20]
gi|254217683|gb|EET07067.1| Appr-1-p processing enzyme family protein [Burkholderia
pseudomallei 1710a]
gi|385349675|gb|EIF56242.1| Appr-1-p processing enzyme family protein [Burkholderia
pseudomallei 1026a]
gi|385356385|gb|EIF62494.1| Appr-1-p processing enzyme family protein [Burkholderia
pseudomallei 1258a]
gi|385358057|gb|EIF64085.1| Appr-1-p processing enzyme family protein [Burkholderia
pseudomallei 1258b]
gi|385370172|gb|EIF75437.1| Appr-1-p processing enzyme family protein [Burkholderia
pseudomallei 354e]
gi|385375258|gb|EIF80045.1| Appr-1-p processing enzyme family protein [Burkholderia
pseudomallei 354a]
gi|385660219|gb|AFI67642.1| Appr-1-p processing enzyme family protein [Burkholderia
pseudomallei 1026b]
Length = 177
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 72/130 (55%), Gaps = 10/130 (7%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAGP+L K C + C G+A++T G++LP
Sbjct: 22 DAIVNAANASLLGGGGVDGAIHRAAGPELVKECATLGG------CATGDAKLTRGYRLPA 75
Query: 93 SHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCGVSQI---MTHA 148
+VIHTVGPV+ + E ++L S Y+ L V IAFPAISCGV + A
Sbjct: 76 KYVIHTVGPVWRGGGHGEAELLASCYRRSLEVAAGAGCASIAFPAISCGVYRFPPADATA 135
Query: 149 IKLQTNCGFL 158
I ++T G L
Sbjct: 136 IAVRTVAGAL 145
>gi|89093260|ref|ZP_01166210.1| histone macro-H2A1-related protein [Neptuniibacter caesariensis]
gi|89082556|gb|EAR61778.1| histone macro-H2A1-related protein [Neptuniibacter caesariensis]
Length = 171
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 72/128 (56%), Gaps = 11/128 (8%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
++ I GDI++ VD AIV+ N LL GG AIH AGP+L + C +
Sbjct: 5 TIDIIMGDITQLSVD----AIVNAANNSLLGGGGVDGAIHRVAGPELLEECRGLK----- 55
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPV-FNFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
C G+A++T G++LP HVIHTVGP+ + L S Y++ L + + ++ +A
Sbjct: 56 -GCDTGQAKLTSGYQLPAKHVIHTVGPIWYGGEEGEAGHLASCYRDSLRLAEQYQLKSVA 114
Query: 134 FPAISCGV 141
FPAISCGV
Sbjct: 115 FPAISCGV 122
>gi|401763156|ref|YP_006578163.1| hypothetical protein ECENHK_08310 [Enterobacter cloacae subsp.
cloacae ENHKU01]
gi|400174690|gb|AFP69539.1| hypothetical protein ECENHK_08310 [Enterobacter cloacae subsp.
cloacae ENHKU01]
Length = 180
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 71/130 (54%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K +++ GDI+ VD IV+ N L+ GG AIH AAGP L +AC + + Q
Sbjct: 2 KPQIEVIHGDITTQHVD----VIVNAANPSLMGGGGVDGAIHRAAGPQLLEACKIVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
CPPG A IT LP VIH VGPV+ + E +L AY+NCL + N +
Sbjct: 58 GE--CPPGHAVITLAGNLPAKAVIHAVGPVWQGGDHHEASLLEEAYRNCLRLAADNGYKT 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 MAFPAISTGV 125
>gi|297205651|ref|ZP_06923047.1| RNase III regulator YmdB [Lactobacillus jensenii JV-V16]
gi|297150229|gb|EFH30526.1| RNase III regulator YmdB [Lactobacillus jensenii JV-V16]
Length = 218
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 67/117 (57%), Gaps = 7/117 (5%)
Query: 28 VDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPG 87
V+ +DAIV+ N+ LL GG AIH+AAGP+L +AC ++ C GEA+ITP
Sbjct: 60 VNFPADAIVNAANKTLLGGGGVDGAIHQAAGPNLLEACKKLN------GCDTGEAKITPS 113
Query: 88 FKLPV-SHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQ 143
F L ++IHTVGPVF NP+ L+S YK L + +AF IS GV +
Sbjct: 114 FDLKTCKYIIHTVGPVFKLSQNPQQQLQSCYKKSLDLALEYKCNSVAFSGISTGVYE 170
>gi|261364700|ref|ZP_05977583.1| RNase III regulator YmdB [Neisseria mucosa ATCC 25996]
gi|288566992|gb|EFC88552.1| RNase III regulator YmdB [Neisseria mucosa ATCC 25996]
Length = 173
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 73/127 (57%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++ +GDI++ VD AIV+ N LL GG AIH AAG +L + C Q+
Sbjct: 4 FEVVEGDITKLEVD----AIVNAANSSLLGGGGVDGAIHRAAGRELLEECRQLNG----- 54
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPV-FNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C GEA+IT G++LP VIHTVGPV F H + L AY+N L + + + I+ IAF
Sbjct: 55 -CRTGEAKITQGYRLPAKFVIHTVGPVWFGGHRSEAVKLAEAYQNSLLLAQEHGIRSIAF 113
Query: 135 PAISCGV 141
P IS GV
Sbjct: 114 PCISTGV 120
>gi|428309560|ref|YP_007120537.1| phosphatase, C-terminal domain of histone macro H2A1 like protein
[Microcoleus sp. PCC 7113]
gi|428251172|gb|AFZ17131.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Microcoleus sp. PCC 7113]
Length = 179
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 72/123 (58%), Gaps = 11/123 (8%)
Query: 20 KGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPP 79
+GDI++ + DAIV+ N LL GG AIH AAGP+L C ++ C
Sbjct: 10 EGDITQ----QQVDAIVNAANTSLLGGGGVDGAIHLAAGPELLVECRRLK------GCKT 59
Query: 80 GEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAFPAIS 138
G+A+IT G+ LP VIHTVGPV++ ED L S Y+ CL++ + I+ IAFPAIS
Sbjct: 60 GDAKITKGYNLPADWVIHTVGPVWHDGKYGEDEQLASCYRRCLAIAEQYEIRSIAFPAIS 119
Query: 139 CGV 141
GV
Sbjct: 120 TGV 122
>gi|424902037|ref|ZP_18325553.1| Appr-1-p processing enzyme family domain protein [Burkholderia
thailandensis MSMB43]
gi|390932412|gb|EIP89812.1| Appr-1-p processing enzyme family domain protein [Burkholderia
thailandensis MSMB43]
Length = 181
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 63/110 (57%), Gaps = 7/110 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAGP L K C + C G+A++T G++LP
Sbjct: 26 DAIVNAANASLLGGGGVDGAIHRAAGPGLVKECATLGG------CATGDAKLTQGYRLPA 79
Query: 93 SHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
+VIHTVGPV++ E ++L S Y+ L V IAFPAISCGV
Sbjct: 80 KYVIHTVGPVWHGGGRGEAELLASCYRRSLEVAAGAGCASIAFPAISCGV 129
>gi|240146430|ref|ZP_04745031.1| RNase III regulator YmdB [Roseburia intestinalis L1-82]
gi|257201436|gb|EEU99720.1| RNase III regulator YmdB [Roseburia intestinalis L1-82]
Length = 173
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 83/161 (51%), Gaps = 27/161 (16%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+K KGDI++ AIV+ N LL GG AIH AAGP+L C +
Sbjct: 4 IKTIKGDITKVT---DVQAIVNAANNSLLGGGGVDGAIHRAAGPELLAECRTLH------ 54
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCN-PEDILRSAYKNCLSVGKANNIQYIAF 134
C GEA+IT + LP +VIHTVGP++N N E++L + Y N + + N I+ IAF
Sbjct: 55 GCETGEAKITKAYNLPCDYVIHTVGPIWNGGRNREEELLANCYFNSMKLAMDNGIRSIAF 114
Query: 135 PAISCGVSQIMTHAIKLQTNCGFLESFWVELSAKVTTYDMD 175
P+IS GV SF VEL+AK+ + ++
Sbjct: 115 PSISTGVY-----------------SFPVELAAKIAVHTVN 138
>gi|187927299|ref|YP_001897786.1| hypothetical protein Rpic_0191 [Ralstonia pickettii 12J]
gi|309780002|ref|ZP_07674755.1| appr-1-p processing enzyme family protein [Ralstonia sp. 5_7_47FAA]
gi|404394596|ref|ZP_10986399.1| UPF0189 protein [Ralstonia sp. 5_2_56FAA]
gi|187724189|gb|ACD25354.1| Appr-1-p processing domain protein [Ralstonia pickettii 12J]
gi|308921172|gb|EFP66816.1| appr-1-p processing enzyme family protein [Ralstonia sp. 5_7_47FAA]
gi|348616675|gb|EGY66175.1| UPF0189 protein [Ralstonia sp. 5_2_56FAA]
Length = 170
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 68/112 (60%), Gaps = 11/112 (9%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N L GG AIH AAGP+L +AC + C GEA++TPGF+LP
Sbjct: 20 DAIVNAANSSLFGGGGVDGAIHRAAGPELLEACRALHG------CRTGEAKLTPGFRLPA 73
Query: 93 SHVIHTVGPVFNFHCNPED---ILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
+VIHTVGP+ +H +D +L + Y+N L + + + ++ IAFP IS GV
Sbjct: 74 RYVIHTVGPI--WHGGRQDEAALLAACYRNSLELARKHEVRSIAFPCISTGV 123
>gi|419795989|ref|ZP_14321563.1| macro domain protein [Neisseria sicca VK64]
gi|385699942|gb|EIG30205.1| macro domain protein [Neisseria sicca VK64]
Length = 173
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 74/127 (58%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++ +GDI++ VD AIV+ N LL GG AIH AAG +L +AC ++
Sbjct: 4 FEVVEGDITKLEVD----AIVNAANASLLGGGGVDGAIHRAAGRELLEACRKLNG----- 54
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPV-FNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C GEA+IT G++LP VIHTVGPV F H + L AY+N L + + + I+ IAF
Sbjct: 55 -CRTGEAKITQGYRLPAKFVIHTVGPVWFGGHRSEAVKLAEAYQNSLLLAQEHGIRSIAF 113
Query: 135 PAISCGV 141
P IS GV
Sbjct: 114 PCISTGV 120
>gi|237810688|ref|YP_002895139.1| appr-1-p processing enzyme family domain protein [Burkholderia
pseudomallei MSHR346]
gi|237503922|gb|ACQ96240.1| appr-1-p processing enzyme family domain protein [Burkholderia
pseudomallei MSHR346]
Length = 188
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 71/130 (54%), Gaps = 10/130 (7%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAGP+L K C + C G+A++T G++LP
Sbjct: 33 DAIVNAANASLLGGGGVDGAIHRAAGPELVKECAALGG------CATGDAKLTRGYRLPA 86
Query: 93 SHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCGVSQI---MTHA 148
+VIHTVGPV+ + E +L S Y+ L V IAFPAISCGV + A
Sbjct: 87 KYVIHTVGPVWRGGGHGEAGLLASCYRRSLEVAAGAGCASIAFPAISCGVYRFPPADATA 146
Query: 149 IKLQTNCGFL 158
I ++T G L
Sbjct: 147 IAVRTVAGAL 156
>gi|167835306|ref|ZP_02462189.1| Appr-1-p processing enzyme family domain protein [Burkholderia
thailandensis MSMB43]
Length = 177
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 63/110 (57%), Gaps = 7/110 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAGP L K C + C G+A++T G++LP
Sbjct: 22 DAIVNAANASLLGGGGVDGAIHRAAGPGLVKECATLGG------CATGDAKLTQGYRLPA 75
Query: 93 SHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
+VIHTVGPV++ E ++L S Y+ L V IAFPAISCGV
Sbjct: 76 KYVIHTVGPVWHGGGRGEAELLASCYRRSLEVAAGAGCASIAFPAISCGV 125
>gi|374814496|ref|ZP_09718233.1| appr-1-p processing [Treponema primitia ZAS-1]
Length = 181
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 71/125 (56%), Gaps = 8/125 (6%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVR---C 77
GDI++ VD AIV+ N LL GG AIH AAGP+L C +I EA+ V C
Sbjct: 11 GDITKLSVD----AIVNAANSSLLGGGGVDGAIHRAAGPELLAECRRIAEARRDVEGGPC 66
Query: 78 PPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPA 136
P GEA IT +KLP +IHTVGPV+ E +L S Y+N + + + + IAFP
Sbjct: 67 PAGEAVITGAYKLPCRKIIHTVGPVWYGGSRGEPALLASCYRNSIILARDSACHSIAFPN 126
Query: 137 ISCGV 141
IS GV
Sbjct: 127 ISTGV 131
>gi|161870943|ref|YP_001600123.1| histone macro-H2A1-like protein [Neisseria meningitidis 053442]
gi|161596496|gb|ABX74156.1| histone macro-H2A1-related protein [Neisseria meningitidis 053442]
Length = 172
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 72/132 (54%), Gaps = 11/132 (8%)
Query: 18 ISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRC 77
+ +GDI+R +D AIV+ N LL GG AIH AAG +L + C + C
Sbjct: 6 VVEGDITRLAID----AIVNAANSSLLGGGGVDGAIHRAAGKELLEECRTLGG------C 55
Query: 78 PPGEARITPGFKLPVSHVIHTVGPV-FNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPA 136
GEA+IT G++LP VIHTVGPV F N E L +Y N L + + +++ IAFP
Sbjct: 56 RTGEAKITKGYRLPARFVIHTVGPVWFGGKQNEEAKLAQSYANSLLLARKHDLHRIAFPC 115
Query: 137 ISCGVSQIMTHA 148
IS GV + A
Sbjct: 116 ISTGVYRFPAEA 127
>gi|386775125|ref|ZP_10097503.1| Appr-1-p processing domain-containing protein [Brachybacterium
paraconglomeratum LC44]
Length = 187
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 72/132 (54%), Gaps = 15/132 (11%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ + +GDI++ VD DAIV+ N LL GG AIH AAGP L C +
Sbjct: 10 ITLRRGDITQ--VD-DVDAIVNAANSTLLGGGGVDGAIHRAAGPGLLAECRTLGG----- 61
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILR------SAYKNCLSVGKANNI 129
C G+A++T G LPV HV+HTVGPV++ H + R S Y+ CL V +++
Sbjct: 62 -CETGDAKLTGGHDLPVPHVLHTVGPVWSAHADEAGRARRDAELASCYRRCLEVAHEHDL 120
Query: 130 QYIAFPAISCGV 141
+AFP+IS G
Sbjct: 121 HRLAFPSISTGA 132
>gi|340363533|ref|ZP_08685863.1| RNase III regulator YmdB [Neisseria macacae ATCC 33926]
gi|339885678|gb|EGQ75385.1| RNase III regulator YmdB [Neisseria macacae ATCC 33926]
Length = 173
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 74/127 (58%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++ +GDI++ VD AIV+ N LL GG AIH AAG +L +AC ++
Sbjct: 4 FEVVEGDITKLEVD----AIVNAANASLLGGGGVDGAIHRAAGRELLEACRKLNG----- 54
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPV-FNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C GEA+IT G++LP VIHTVGPV F H + L AY+N L + + + I+ IAF
Sbjct: 55 -CRTGEAKITQGYRLPAKFVIHTVGPVWFGGHRSEAVKLAEAYQNSLLLAQEHGIRSIAF 113
Query: 135 PAISCGV 141
P IS GV
Sbjct: 114 PCISTGV 120
>gi|291556532|emb|CBL33649.1| Predicted phosphatase homologous to the C-terminal domain of
histone macroH2A1 [Eubacterium siraeum V10Sc8a]
Length = 354
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 71/127 (55%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
LKI + DI++ DA+V+ NE LL GG AIH AAG +L K C +
Sbjct: 3 LKIVRADITKL----PCDAVVNAANESLLGGGGVDGAIHRAAGEELYKECLALG------ 52
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C GEA+IT G K+P ++IHTVGP++ + +L S Y+N LS+ N + +AF
Sbjct: 53 GCRTGEAKITSGCKMPCRYIIHTVGPIWRGGDFGEKQLLESCYRNSLSLALKNGCESVAF 112
Query: 135 PAISCGV 141
P IS GV
Sbjct: 113 PMISAGV 119
>gi|238925774|ref|YP_002939291.1| Appr-1-p processing enzyme family [Eubacterium rectale ATCC 33656]
gi|238877450|gb|ACR77157.1| Appr-1-p processing enzyme family [Eubacterium rectale ATCC 33656]
Length = 179
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 71/126 (56%), Gaps = 10/126 (7%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++ KGDI++ R AIV+ N LL GG AIH AAGP+L C +
Sbjct: 2 IRTVKGDITKI---RDVQAIVNAANNSLLGGGGVDGAIHRAAGPELLAECRTLH------ 52
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCN-PEDILRSAYKNCLSVGKANNIQYIAF 134
C GEA+IT + LP +VIHTVGP++N N E++L + Y N + + N I+ IAF
Sbjct: 53 GCETGEAKITKAYNLPCDYVIHTVGPIWNGGRNREEELLANCYFNSMKLAMDNGIRSIAF 112
Query: 135 PAISCG 140
P+IS G
Sbjct: 113 PSISTG 118
>gi|170768312|ref|ZP_02902765.1| appr-1-p processing enzyme domain protein [Escherichia albertii
TW07627]
gi|170123078|gb|EDS92009.1| appr-1-p processing enzyme domain protein [Escherichia albertii
TW07627]
Length = 177
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K+ + + +GDI++ VD IV+ N L+ GG AIH AAGP L AC ++ + Q
Sbjct: 2 KSRIHVVQGDITKLTVD----VIVNAANPSLMGGGGVDGAIHRAAGPALLDACLKVRQLQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQY 131
CP G A IT LP V+HTVGPV+ ED +L+ AY N L + AN
Sbjct: 58 G--DCPTGHAVITLTGSLPAKAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVAANGYAS 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 VAFPAISTGV 125
>gi|218704453|ref|YP_002411972.1| hypothetical protein ECUMN_1219 [Escherichia coli UMN026]
gi|293404333|ref|ZP_06648327.1| hypothetical protein ECGG_02724 [Escherichia coli FVEC1412]
gi|298380111|ref|ZP_06989716.1| ymdB protein [Escherichia coli FVEC1302]
gi|300899560|ref|ZP_07117799.1| RNase III regulator YmdB [Escherichia coli MS 198-1]
gi|331662447|ref|ZP_08363370.1| RNase III regulator YmdB [Escherichia coli TA143]
gi|387606569|ref|YP_006095425.1| putative DNA and/or RNA unwinding protein [Escherichia coli 042]
gi|417585970|ref|ZP_12236743.1| macro domain protein [Escherichia coli STEC_C165-02]
gi|419936010|ref|ZP_14453050.1| hypothetical protein EC5761_19542 [Escherichia coli 576-1]
gi|422332151|ref|ZP_16413165.1| UPF0189 protein ymdB [Escherichia coli 4_1_47FAA]
gi|432352989|ref|ZP_19596272.1| hypothetical protein WCA_01969 [Escherichia coli KTE2]
gi|432401220|ref|ZP_19643974.1| hypothetical protein WEK_01400 [Escherichia coli KTE26]
gi|432425276|ref|ZP_19667791.1| hypothetical protein A139_00668 [Escherichia coli KTE181]
gi|432460048|ref|ZP_19702204.1| hypothetical protein A15I_00917 [Escherichia coli KTE204]
gi|432475138|ref|ZP_19717144.1| hypothetical protein A15Q_01325 [Escherichia coli KTE208]
gi|432488745|ref|ZP_19730629.1| hypothetical protein A171_00662 [Escherichia coli KTE213]
gi|432521718|ref|ZP_19758873.1| hypothetical protein A17U_04722 [Escherichia coli KTE228]
gi|432537086|ref|ZP_19774003.1| hypothetical protein A195_00711 [Escherichia coli KTE235]
gi|432630645|ref|ZP_19866589.1| hypothetical protein A1UW_01027 [Escherichia coli KTE80]
gi|432640246|ref|ZP_19876085.1| hypothetical protein A1W1_01106 [Escherichia coli KTE83]
gi|432665318|ref|ZP_19900902.1| hypothetical protein A1Y3_01917 [Escherichia coli KTE116]
gi|432774221|ref|ZP_20008505.1| hypothetical protein A1SG_02306 [Escherichia coli KTE54]
gi|432838762|ref|ZP_20072251.1| hypothetical protein A1YQ_01719 [Escherichia coli KTE140]
gi|432885513|ref|ZP_20100034.1| hypothetical protein A31C_01747 [Escherichia coli KTE158]
gi|432911589|ref|ZP_20117864.1| hypothetical protein A13Q_01470 [Escherichia coli KTE190]
gi|433018001|ref|ZP_20206258.1| hypothetical protein WI7_01054 [Escherichia coli KTE105]
gi|433052407|ref|ZP_20239627.1| hypothetical protein WIK_01236 [Escherichia coli KTE122]
gi|433067293|ref|ZP_20254113.1| hypothetical protein WIQ_01190 [Escherichia coli KTE128]
gi|433158012|ref|ZP_20342873.1| hypothetical protein WKU_01094 [Escherichia coli KTE177]
gi|433177567|ref|ZP_20362012.1| hypothetical protein WGM_01236 [Escherichia coli KTE82]
gi|433202578|ref|ZP_20386373.1| hypothetical protein WGY_01165 [Escherichia coli KTE95]
gi|218431550|emb|CAR12428.1| conserved hypothetical protein [Escherichia coli UMN026]
gi|284920869|emb|CBG33932.1| putative DNA and/or RNA unwinding protein [Escherichia coli 042]
gi|291428919|gb|EFF01944.1| hypothetical protein ECGG_02724 [Escherichia coli FVEC1412]
gi|298279809|gb|EFI21317.1| ymdB protein [Escherichia coli FVEC1302]
gi|300356831|gb|EFJ72701.1| RNase III regulator YmdB [Escherichia coli MS 198-1]
gi|331060869|gb|EGI32833.1| RNase III regulator YmdB [Escherichia coli TA143]
gi|345339126|gb|EGW71552.1| macro domain protein [Escherichia coli STEC_C165-02]
gi|373246925|gb|EHP66374.1| UPF0189 protein ymdB [Escherichia coli 4_1_47FAA]
gi|388402271|gb|EIL62846.1| hypothetical protein EC5761_19542 [Escherichia coli 576-1]
gi|430877463|gb|ELC00914.1| hypothetical protein WCA_01969 [Escherichia coli KTE2]
gi|430927818|gb|ELC48381.1| hypothetical protein WEK_01400 [Escherichia coli KTE26]
gi|430958510|gb|ELC77104.1| hypothetical protein A139_00668 [Escherichia coli KTE181]
gi|430990706|gb|ELD07127.1| hypothetical protein A15I_00917 [Escherichia coli KTE204]
gi|431008172|gb|ELD22979.1| hypothetical protein A15Q_01325 [Escherichia coli KTE208]
gi|431022943|gb|ELD36203.1| hypothetical protein A171_00662 [Escherichia coli KTE213]
gi|431043861|gb|ELD54142.1| hypothetical protein A17U_04722 [Escherichia coli KTE228]
gi|431072663|gb|ELD80414.1| hypothetical protein A195_00711 [Escherichia coli KTE235]
gi|431173680|gb|ELE73756.1| hypothetical protein A1UW_01027 [Escherichia coli KTE80]
gi|431184106|gb|ELE83872.1| hypothetical protein A1W1_01106 [Escherichia coli KTE83]
gi|431202953|gb|ELF01630.1| hypothetical protein A1Y3_01917 [Escherichia coli KTE116]
gi|431319566|gb|ELG07236.1| hypothetical protein A1SG_02306 [Escherichia coli KTE54]
gi|431391228|gb|ELG74876.1| hypothetical protein A1YQ_01719 [Escherichia coli KTE140]
gi|431418559|gb|ELH00954.1| hypothetical protein A31C_01747 [Escherichia coli KTE158]
gi|431443296|gb|ELH24373.1| hypothetical protein A13Q_01470 [Escherichia coli KTE190]
gi|431535315|gb|ELI11695.1| hypothetical protein WI7_01054 [Escherichia coli KTE105]
gi|431574488|gb|ELI47268.1| hypothetical protein WIK_01236 [Escherichia coli KTE122]
gi|431588955|gb|ELI60176.1| hypothetical protein WIQ_01190 [Escherichia coli KTE128]
gi|431680575|gb|ELJ46398.1| hypothetical protein WKU_01094 [Escherichia coli KTE177]
gi|431708483|gb|ELJ72992.1| hypothetical protein WGM_01236 [Escherichia coli KTE82]
gi|431724676|gb|ELJ88592.1| hypothetical protein WGY_01165 [Escherichia coli KTE95]
Length = 177
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
KT + + +GDI++ VD IV+ N L+ GG AIH AAGP L AC ++ + Q
Sbjct: 2 KTRIHVVQGDITKLAVD----VIVNAANPSLMGGGGVDGAIHRAAGPALLDACLKVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQY 131
CP G A IT L V+HTVGPV+ ED +L+ AY N L + AN+
Sbjct: 58 G--DCPTGHAVITLAGDLSAKAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVAANSYTS 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 VAFPAISTGV 125
>gi|392966190|ref|ZP_10331609.1| UPF0189 protein [Fibrisoma limi BUZ 3]
gi|387845254|emb|CCH53655.1| UPF0189 protein [Fibrisoma limi BUZ 3]
Length = 166
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 78/145 (53%), Gaps = 19/145 (13%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+ +I +GDI++ VD AIV+ N LL GG AIH AAGP+L C +
Sbjct: 3 TFRIERGDITKLAVD----AIVNAANTSLLGGGGVDGAIHRAAGPELLTECRTLNG---- 54
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIA 133
C G+A++T G++LP +VIH VGP++ E ++L S Y+ L + A+ + +A
Sbjct: 55 --CATGDAKLTRGYRLPARYVIHAVGPIWRGGTAGEPELLASCYRRSLEIATAHELTSLA 112
Query: 134 FPAISCGV--------SQIMTHAIK 150
FP IS GV + + TH ++
Sbjct: 113 FPNISTGVYGYPKSLAADVATHTVR 137
>gi|300692693|ref|YP_003753688.1| hypothetical protein RPSI07_3076 [Ralstonia solanacearum PSI07]
gi|299079753|emb|CBJ52429.1| conserved protein of unknown function, UPF0189 family doamin
[Ralstonia solanacearum PSI07]
Length = 171
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 74/128 (57%), Gaps = 11/128 (8%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+L+ + DI+ DAIV+ N LL GG AIH AAGP+L +AC +
Sbjct: 7 TLRALRADITTL----ECDAIVNAANSSLLGGGGVDGAIHRAAGPELLEACRALHG---- 58
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSA-YKNCLSVGKANNIQYIA 133
C G+A+ITPGF LP +VIHTVGP++ E L +A Y+N L + K ++++ IA
Sbjct: 59 --CRTGQAKITPGFLLPARYVIHTVGPIWRGGRQDEAALLAACYRNSLVLAKQHDVRTIA 116
Query: 134 FPAISCGV 141
FP IS GV
Sbjct: 117 FPCISTGV 124
>gi|291531927|emb|CBK97512.1| Predicted phosphatase homologous to the C-terminal domain of
histone macroH2A1 [Eubacterium siraeum 70/3]
Length = 354
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 72/127 (56%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
LKI + DI+++ DA+V+ NE LL GG AIH AAGP+L K C +
Sbjct: 3 LKIVRADITKF----PCDAVVNAANESLLGGGGVDGAIHRAAGPELYKECLALG------ 52
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C GEA+IT G K+P ++IHTVGP++ + +L S Y+N LS+ + +AF
Sbjct: 53 GCRTGEAKITSGCKMPCRYIIHTVGPIWRGGDFGEKRLLESCYRNSLSLALEYGCESVAF 112
Query: 135 PAISCGV 141
P IS GV
Sbjct: 113 PMISAGV 119
>gi|328952674|ref|YP_004370008.1| Appr-1-p processing domain-containing protein [Desulfobacca
acetoxidans DSM 11109]
gi|328452998|gb|AEB08827.1| Appr-1-p processing domain protein [Desulfobacca acetoxidans DSM
11109]
Length = 180
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 77/131 (58%), Gaps = 11/131 (8%)
Query: 12 TKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEA 71
+ L++ +GDI+R + ++AIV+ NE L +GG AI+ A GP +Q+ EA
Sbjct: 6 NRGMLELVEGDITR----QDTEAIVNAANEQLRVGGGVDGAINRAGGPKIQE------EA 55
Query: 72 QPRVRCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQ 130
+ CP G+A IT G L ++VIHTVGP++ N ++L S Y+ CL + A I+
Sbjct: 56 RKIGYCPTGQAVITTGGDLKATNVIHTVGPIYKNGLAGEPELLASCYRECLKLASARGIK 115
Query: 131 YIAFPAISCGV 141
+AFP+IS GV
Sbjct: 116 SLAFPSISTGV 126
>gi|301023215|ref|ZP_07187014.1| RNase III regulator YmdB [Escherichia coli MS 69-1]
gi|419918170|ref|ZP_14436382.1| hypothetical protein ECKD2_09319 [Escherichia coli KD2]
gi|300397139|gb|EFJ80677.1| RNase III regulator YmdB [Escherichia coli MS 69-1]
gi|388391969|gb|EIL53406.1| hypothetical protein ECKD2_09319 [Escherichia coli KD2]
Length = 177
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
KT + + +GDI++ VD IV+ N L+ GG AIH AAGP L AC ++ + Q
Sbjct: 2 KTRIHVVQGDITKLAVD----VIVNAANPSLMGGGGVDGAIHRAAGPALLDACLKVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQY 131
CP G A IT LP V+HTVGPV+ ED +L+ AY N L + AN+
Sbjct: 58 G--DCPTGHAVITLAGDLPAKAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVAANSYTS 115
Query: 132 IAFPAISCGV 141
+AFPAI GV
Sbjct: 116 VAFPAICTGV 125
>gi|302789876|ref|XP_002976706.1| hypothetical protein SELMODRAFT_443259 [Selaginella moellendorffii]
gi|300155744|gb|EFJ22375.1| hypothetical protein SELMODRAFT_443259 [Selaginella moellendorffii]
Length = 424
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 85/152 (55%), Gaps = 13/152 (8%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR-VRCPP 79
GD+S+W VD DA+++P N+ L G A + +AAG L A ++P+ P+ ++
Sbjct: 181 GDLSKWHVDGKYDAVIAPGNKRLNTGPAVNAVLFKAAGSRLLDATQRLPDVAPQGIKAEV 240
Query: 80 GEARITPGFKLPVSHVIHTVGPVFNFH-----CNPEDILRSAYKNCLSVGKANNIQYIAF 134
G+A T F LPV+ VIHTVGPV+ + L AYK L V + N++Y+AF
Sbjct: 241 GDAISTRAFNLPVARVIHTVGPVYKKDETTNVRESDPYLEKAYKAALLVARRENLKYLAF 300
Query: 135 PAISCGV-----SQIMTHAIK-LQTNC-GFLE 159
P +SC + S+ A++ L+ NC GFL+
Sbjct: 301 PPLSCRIYGYPYSEGAEVALRTLKANCEGFLQ 332
>gi|309791626|ref|ZP_07686119.1| appr-1-p processing domain-containing protein [Oscillochloris
trichoides DG-6]
gi|308226344|gb|EFO80079.1| appr-1-p processing domain-containing protein [Oscillochloris
trichoides DG6]
Length = 358
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 75/130 (57%), Gaps = 15/130 (11%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPD-LQKACYQIPEAQPR 74
+++ GDI R VD AIV+ NE L GG AIH+AAG + L+ AC Q
Sbjct: 179 IELVLGDIVRQDVD----AIVNAANESLANGGGVCGAIHDAAGAEQLEAAC------QAL 228
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED---ILRSAYKNCLSVGKANNIQY 131
CP GEARITPGFKL H+IH VGP+++ + NPE +L SAY L + +
Sbjct: 229 GTCPTGEARITPGFKLQARHIIHAVGPIYSRY-NPEHAERLLASAYHASLVLASEQRLAR 287
Query: 132 IAFPAISCGV 141
IAFP++S G+
Sbjct: 288 IAFPSLSTGI 297
>gi|227545305|ref|ZP_03975354.1| Appr-1-p processing domain protein [Lactobacillus reuteri CF48-3A]
gi|338203341|ref|YP_004649486.1| RNase III regulator YmdB [Lactobacillus reuteri SD2112]
gi|227184701|gb|EEI64772.1| Appr-1-p processing domain protein [Lactobacillus reuteri CF48-3A]
gi|336448581|gb|AEI57196.1| RNase III regulator YmdB [Lactobacillus reuteri SD2112]
Length = 167
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 73/127 (57%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ + KGDI++ VD AIV+ N L+ GG AIH AAGP L AC +
Sbjct: 4 INVIKGDITKIKVD----AIVNAANTTLMGGGGVDGAIHRAAGPALYGACEKFHG----- 54
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAF 134
CP GEARIT GF LP +IHT GP+++ N ED +L ++Y N L + + + +AF
Sbjct: 55 -CPTGEARITGGFNLPAKFIIHTPGPIWHGGDNGEDQLLANSYHNSLLLADKHLCRTVAF 113
Query: 135 PAISCGV 141
P+IS GV
Sbjct: 114 PSISTGV 120
>gi|428307381|ref|YP_007144206.1| Appr-1-p processing protein [Crinalium epipsammum PCC 9333]
gi|428248916|gb|AFZ14696.1| Appr-1-p processing domain protein [Crinalium epipsammum PCC 9333]
Length = 174
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 71/130 (54%), Gaps = 11/130 (8%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K+ + + +GDI++ VD AIV+ N LL GG AIH AAG L C ++
Sbjct: 3 KSKIAVIQGDITQQQVD----AIVNAANNSLLGGGGVDGAIHRAAGSKLLAECRKLQ--- 55
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQY 131
C GEA+IT G+ LP VIHTVGPV+ + ED +L Y+N L++ I
Sbjct: 56 ---GCATGEAKITKGYNLPAQWVIHTVGPVWQGGKHGEDELLAQCYRNSLALADKYEISS 112
Query: 132 IAFPAISCGV 141
IAFP IS G+
Sbjct: 113 IAFPGISTGI 122
>gi|402838434|ref|ZP_10886941.1| macro domain protein [Eubacteriaceae bacterium OBRC8]
gi|402272911|gb|EJU22122.1| macro domain protein [Eubacteriaceae bacterium OBRC8]
Length = 368
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 71/126 (56%), Gaps = 11/126 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L+I + DI++ VD AIV+ N LL GG AIH+AAG +L + C ++
Sbjct: 3 LEIIRADITKLEVD----AIVNAANSSLLGGGGVDGAIHKAAGKELLEECRKLN------ 52
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
C G A+IT G+ LP ++IHTVGP++ N E L + YKN L + K + I IAF
Sbjct: 53 GCNTGMAKITKGYNLPAKYIIHTVGPIYRGGNNNEKQELTNCYKNSLKLAKEHKINSIAF 112
Query: 135 PAISCG 140
P IS G
Sbjct: 113 PIISSG 118
>gi|426199101|gb|EKV49026.1| hypothetical protein AGABI2DRAFT_191172 [Agaricus bisporus var.
bisporus H97]
Length = 235
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 71/130 (54%), Gaps = 16/130 (12%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ + +GDI+ VD AIV+ NE LL GG AIH AAGP+L + C +
Sbjct: 44 VSVCRGDITVIDVD----AIVNAANESLLGGGGVDGAIHRAAGPELLEECRLLN------ 93
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDI----LRSAYKNCLSVGKANNIQY 131
C G+A+IT G+KL HVIHTVGPV +H ED L S YK L V ++
Sbjct: 94 GCEIGDAKITKGYKLSARHVIHTVGPV--YHSEYEDTIAGQLASCYKRSLEVAVEKGLKS 151
Query: 132 IAFPAISCGV 141
IAFP IS G+
Sbjct: 152 IAFPCISTGI 161
>gi|417690125|ref|ZP_12339349.1| macro domain protein [Shigella boydii 5216-82]
gi|332088795|gb|EGI93907.1| macro domain protein [Shigella boydii 5216-82]
Length = 177
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
KT + + +GDI++ VD IV+ N L+ G AIH AAGP L AC ++ + Q
Sbjct: 2 KTRIHVVQGDITKLAVD----VIVNAANPSLMGGDGVDGAIHRAAGPALLDACLKVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQY 131
CP G A IT LP V+HTVGPV+ ED +L+ AY N L + AN+
Sbjct: 58 GD--CPTGHAVITLAGDLPAKAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVAANSYTS 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 VAFPAISTGV 125
>gi|344168209|emb|CCA80480.1| conserved hypothetical protein, UPF0189 family doamin [blood
disease bacterium R229]
Length = 171
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 74/128 (57%), Gaps = 11/128 (8%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+L+ + DI+ DAIV+ N LL GG AIH AAGP+L +AC +
Sbjct: 7 TLRALRADITTL----ECDAIVNAANSSLLGGGGVDGAIHRAAGPELLEACRALHG---- 58
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSA-YKNCLSVGKANNIQYIA 133
C G+A+ITPGF LP +VIHTVGP++ E L +A Y+N L + K ++++ IA
Sbjct: 59 --CRTGQAKITPGFLLPARYVIHTVGPIWRGGRQDEAALLAACYRNSLVLAKQHDVRTIA 116
Query: 134 FPAISCGV 141
FP IS GV
Sbjct: 117 FPCISTGV 124
>gi|383319875|ref|YP_005380716.1| phosphatase, histone macroH2A1-like protein [Methanocella conradii
HZ254]
gi|379321245|gb|AFD00198.1| putative phosphatase, histone macroH2A1-like protein [Methanocella
conradii HZ254]
Length = 175
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 72/127 (56%), Gaps = 11/127 (8%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
S I GDI++ VD AIV+ N LL GG AIH AAGP L + C ++
Sbjct: 7 SFSIILGDITKQRVD----AIVNAANPTLLGGGGVDGAIHAAAGPGLLEECRKLKG---- 58
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
C G+A++T G+ LP +VIHTVGP++ +++L S Y+ C + + N I+ IA
Sbjct: 59 --CQTGQAKLTRGYNLPAKYVIHTVGPIWKGGKSGEQELLASCYRECFRLAEQNGIRSIA 116
Query: 134 FPAISCG 140
FP+IS G
Sbjct: 117 FPSISTG 123
>gi|386401759|ref|ZP_10086537.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Bradyrhizobium sp. WSM1253]
gi|385742385|gb|EIG62581.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Bradyrhizobium sp. WSM1253]
Length = 183
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 72/127 (56%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
LK+ DI+ VD AIV+ N LL GG AIH AAGP+L C ++
Sbjct: 13 LKVIVADITTLSVD----AIVNAANTSLLGGGGVDGAIHRAAGPELLAECRKLGG----- 63
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
CP G+A+IT G+ LP HVIH VGPV++ E + L S Y+ L + +AN ++ +AF
Sbjct: 64 -CPTGDAKITKGYLLPARHVIHAVGPVWHGGTRGEAEALGSCYRRALELCEANQLRSVAF 122
Query: 135 PAISCGV 141
AIS GV
Sbjct: 123 SAISTGV 129
>gi|421839537|ref|ZP_16273086.1| RNase III inhibitor, partial [Clostridium botulinum CFSAN001627]
gi|409734132|gb|EKN35958.1| RNase III inhibitor, partial [Clostridium botulinum CFSAN001627]
Length = 134
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 74/135 (54%), Gaps = 7/135 (5%)
Query: 8 LSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQ 67
+S S +KI KGDI++ VD AIV+ N LL GG AIH A G + + C
Sbjct: 1 MSISYINKIKIIKGDITKENVD----AIVNAANSSLLGGGGVDGAIHRAGGNKILEECKS 56
Query: 68 IPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNF-HCNPEDILRSAYKNCLSVGKA 126
I ++ GEA IT G L +VIHTVGP+++ N E +L +AY+N L +
Sbjct: 57 IVSKIGSLKI--GEAVITSGGNLKAKYVIHTVGPIWHGGESNEETLLANAYRNSLKLAVE 114
Query: 127 NNIQYIAFPAISCGV 141
N++ IAFP IS GV
Sbjct: 115 KNVKTIAFPNISTGV 129
>gi|339442946|ref|YP_004708951.1| hypothetical protein CXIVA_18820 [Clostridium sp. SY8519]
gi|338902347|dbj|BAK47849.1| uncharacterized ACR protein [Clostridium sp. SY8519]
Length = 178
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 77/127 (60%), Gaps = 10/127 (7%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++I +GDI++ VD +AIV+ N LL GG AIH AAGP+L C +
Sbjct: 5 IQIVQGDITK--VD-DLEAIVNAANNSLLGGGGVDGAIHRAAGPELLAECRTLHG----- 56
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
C GEA+IT +KLP +VIHTVGP+++ + E ++L SAY+N L + I+ IAF
Sbjct: 57 -CQTGEAKITGAYKLPCKYVIHTVGPIWHGGNDGEPELLTSAYRNSLQCAADHGIRTIAF 115
Query: 135 PAISCGV 141
P++S GV
Sbjct: 116 PSVSTGV 122
>gi|319639524|ref|ZP_07994271.1| histone macro-H2A1-like protein [Neisseria mucosa C102]
gi|317399095|gb|EFV79769.1| histone macro-H2A1-like protein [Neisseria mucosa C102]
Length = 172
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 72/134 (53%), Gaps = 11/134 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++ +GDI+R VD AIV+ N LL GG AIH AAG +L C +
Sbjct: 4 FEVVEGDITRLAVD----AIVNAANSSLLGGGGVDGAIHRAAGKELLDECRTLGG----- 54
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPV-FNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C GEA+IT G++LP VIHTVGPV F N E L +Y N L + + +++ IAF
Sbjct: 55 -CRTGEAKITQGYRLPARFVIHTVGPVWFGGKQNEEAKLAQSYANSLLLAQKHDLHSIAF 113
Query: 135 PAISCGVSQIMTHA 148
P IS GV + A
Sbjct: 114 PCISTGVYRFPAEA 127
>gi|387818457|ref|YP_005678803.1| macro domain, possibly ADP-ribose binding module [Clostridium
botulinum H04402 065]
gi|322806500|emb|CBZ04069.1| macro domain, possibly ADP-ribose binding module [Clostridium
botulinum H04402 065]
Length = 180
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 72/129 (55%), Gaps = 7/129 (5%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
+KI KGDI++ VD A+V+ N LL GG AIH A G + + C I
Sbjct: 7 NKIKIIKGDITKENVD----AVVNAANSSLLGGGGVDGAIHRAGGNKILEECKSIVSKIG 62
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNF-HCNPEDILRSAYKNCLSVGKANNIQYI 132
+++ GEA IT G L +VIHTVGP+++ N E +L +AYKN L + NI+ I
Sbjct: 63 QLKT--GEAVITSGGNLKAKYVIHTVGPIWHGGKSNEETLLANAYKNSLKLAAEKNIKTI 120
Query: 133 AFPAISCGV 141
AFP IS GV
Sbjct: 121 AFPNISTGV 129
>gi|253578258|ref|ZP_04855530.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850576|gb|EES78534.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 175
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 88/170 (51%), Gaps = 22/170 (12%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
LK +GDI++ AIV+ N LL GG AIH AAGP+L + C +
Sbjct: 4 LKTIRGDITKIT---DVQAIVNAANNSLLGGGGVDGAIHRAAGPELLEECRTLH------ 54
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFN-FHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C G+A+IT +KLP +VIHTVGP++N + N +++L S Y + + + + I+ IAF
Sbjct: 55 GCETGKAKITKAYKLPCEYVIHTVGPIWNGGNQNEKELLASCYLSSMQLALEHKIRKIAF 114
Query: 135 PAISCGVSQI---MTHAIKLQTNCGFLESFWVELSAKVTTYDMDLIETAL 181
P+IS GV + I + T GFL K D DL+E L
Sbjct: 115 PSISTGVYSFPVGLATKIAVNTVAGFL---------KEHPDDFDLVEWVL 155
>gi|168183872|ref|ZP_02618536.1| putative phosphatase [Clostridium botulinum Bf]
gi|237795672|ref|YP_002863224.1| hypothetical protein CLJ_B2459 [Clostridium botulinum Ba4 str. 657]
gi|182672900|gb|EDT84861.1| putative phosphatase [Clostridium botulinum Bf]
gi|229261298|gb|ACQ52331.1| putative RNAase regulator [Clostridium botulinum Ba4 str. 657]
Length = 180
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 75/135 (55%), Gaps = 7/135 (5%)
Query: 8 LSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQ 67
+S S +KI KGDI++ V+ AIV+ N LL GG AIH A G + + C
Sbjct: 1 MSISYINKIKIIKGDITKENVN----AIVNAANSSLLGGGGVDGAIHRAGGNKILEECKS 56
Query: 68 IPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNF-HCNPEDILRSAYKNCLSVGKA 126
I +++ GEA IT G L +VIHTVGP+++ N E +L +AY+N L +
Sbjct: 57 IVSKIGQLKT--GEAVITSGGNLKAKYVIHTVGPIWHGGKSNEETLLANAYRNSLKLAAE 114
Query: 127 NNIQYIAFPAISCGV 141
NI+ IAFP IS GV
Sbjct: 115 ENIKTIAFPNISTGV 129
>gi|261380547|ref|ZP_05985120.1| RNase III regulator YmdB [Neisseria subflava NJ9703]
gi|284796515|gb|EFC51862.1| RNase III regulator YmdB [Neisseria subflava NJ9703]
Length = 172
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 72/134 (53%), Gaps = 11/134 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++ +GDI+R VD AIV+ N LL GG AIH AAG +L C +
Sbjct: 4 FEVVEGDITRLAVD----AIVNAANSSLLGGGGVDGAIHRAAGKELLDECRTLGG----- 54
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPV-FNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C GEA+IT G++LP VIHTVGPV F N E L +Y N L + + +++ IAF
Sbjct: 55 -CRTGEAKITQGYRLPARFVIHTVGPVWFGGKQNEEAKLAQSYANSLLLAQKHDLHSIAF 113
Query: 135 PAISCGVSQIMTHA 148
P IS GV + A
Sbjct: 114 PCISTGVYRFPAEA 127
>gi|432877654|ref|XP_004073204.1| PREDICTED: O-acetyl-ADP-ribose deacetylase MACROD1-like [Oryzias
latipes]
Length = 358
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 67/123 (54%), Gaps = 12/123 (9%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPG 80
GDI++ VD AIV+ N+ LL GG AIH AAGP L+K C + C G
Sbjct: 185 GDITKLEVD----AIVNAANKTLLGGGGVDGAIHRAAGPMLKKECASLH------CCETG 234
Query: 81 EARITPGFKLPVSHVIHTVGPVFNFHCNPED--ILRSAYKNCLSVGKANNIQYIAFPAIS 138
EA+IT G+ LP +VIHTVGP+ E+ LRS YKN L + +AFP IS
Sbjct: 235 EAKITGGYGLPAKYVIHTVGPIIQGGVEEEERRALRSCYKNSLQTATEKAARSVAFPCIS 294
Query: 139 CGV 141
G+
Sbjct: 295 TGI 297
>gi|409197328|ref|ZP_11225991.1| phosphatase, C-terminal domain of histone macro H2A1 like protein
[Marinilabilia salmonicolor JCM 21150]
Length = 174
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 70/128 (54%), Gaps = 9/128 (7%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T+++I +GDI+ AIV+ N LL GG A AIH AAGP L+K C +P
Sbjct: 8 TTIEIGRGDIAS---QPDMQAIVNAANAQLLNGGGVAGAIHRAAGPGLEKEC------KP 58
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
PGEA I+ G LP +VIH +GPV+ + +L Y+N L + I+ IA
Sbjct: 59 MGPIQPGEAVISGGHNLPNKYVIHCLGPVYGKDKPEDKLLADCYRNALQLADKKEIESIA 118
Query: 134 FPAISCGV 141
FPAIS G+
Sbjct: 119 FPAISTGI 126
>gi|358067295|ref|ZP_09153776.1| hypothetical protein HMPREF9333_00657 [Johnsonella ignava ATCC
51276]
gi|356694467|gb|EHI56127.1| hypothetical protein HMPREF9333_00657 [Johnsonella ignava ATCC
51276]
Length = 173
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 79/155 (50%), Gaps = 27/155 (17%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+K KGDI++ AIV+ N LL GG AIH AAGP+L C +
Sbjct: 4 IKTVKGDITKIT---DVQAIVNAANNSLLGGGGVDGAIHRAAGPELLAECRTLNG----- 55
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFN-FHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C GEA+IT + LP ++VIHTVGP++N E++L Y N + + N I+ +AF
Sbjct: 56 -CATGEAKITKAYNLPCNYVIHTVGPIWNGGRSREEELLAGCYFNSMKLAMDNGIRSVAF 114
Query: 135 PAISCGVSQIMTHAIKLQTNCGFLESFWVELSAKV 169
P+IS GV SF VEL+AK+
Sbjct: 115 PSISTGVY-----------------SFPVELAAKI 132
>gi|452965742|gb|EME70761.1| phosphatase [Magnetospirillum sp. SO-1]
Length = 172
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 70/127 (55%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++I + DI+R VD AIV+ N LL GG AIH AAGP L AC +
Sbjct: 6 MRIVEADITRLEVD----AIVNAANSSLLGGGGVDGAIHRAAGPQLLDACRLLGG----- 56
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
C G+ARITPGF+LP VIHTVGPV+ E +L+S Y+ L + + +AF
Sbjct: 57 -CATGDARITPGFRLPARWVIHTVGPVWQGGGQGEAALLQSCYRRSLDLAAEAGARSLAF 115
Query: 135 PAISCGV 141
AIS G+
Sbjct: 116 SAISTGI 122
>gi|256852183|ref|ZP_05557569.1| appr-1-p processing domain-containing protein [Lactobacillus
jensenii 27-2-CHN]
gi|260661784|ref|ZP_05862695.1| appr-1-p processing protein [Lactobacillus jensenii 115-3-CHN]
gi|256615229|gb|EEU20420.1| appr-1-p processing domain-containing protein [Lactobacillus
jensenii 27-2-CHN]
gi|260547531|gb|EEX23510.1| appr-1-p processing protein [Lactobacillus jensenii 115-3-CHN]
Length = 176
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 67/117 (57%), Gaps = 7/117 (5%)
Query: 28 VDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPG 87
V+ +DAIV+ N+ LL GG AIH+AAGP+L +AC ++ C GEA+ITP
Sbjct: 18 VNFPADAIVNAANKTLLGGGGVDGAIHQAAGPNLLEACKKLN------GCDTGEAKITPS 71
Query: 88 FKLPV-SHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQ 143
F L ++IHTVGPVF NP+ L+S YK L + +AF IS GV +
Sbjct: 72 FDLKTCKYIIHTVGPVFKLSQNPQQQLQSCYKKSLDLALEYKCNSVAFSGISTGVYE 128
>gi|297617566|ref|YP_003702725.1| Appr-1-p processing domain-containing protein [Syntrophothermus
lipocalidus DSM 12680]
gi|297145403|gb|ADI02160.1| Appr-1-p processing domain protein [Syntrophothermus lipocalidus
DSM 12680]
Length = 181
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 73/141 (51%), Gaps = 11/141 (7%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L+I +GDI+ ++ +DAIV+ N L GG AIH AAGP L AC QI
Sbjct: 11 LEIVQGDIT----EQDTDAIVNAANSRLAPGGGVCGAIHRAAGPKLAMACAQIGG----- 61
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFP 135
CP GE R+T GF L +V H VGPV+ ++L S Y+ L + I+FP
Sbjct: 62 -CPTGEVRVTEGFNLKAKYVFHAVGPVYRGAPEDAELLASCYRESLKKAVEMGLASISFP 120
Query: 136 AISCGV-SQIMTHAIKLQTNC 155
AIS G+ + A ++ NC
Sbjct: 121 AISTGIFGYPIREAAEVALNC 141
>gi|407005609|gb|EKE21686.1| hypothetical protein ACD_7C00154G0005 [uncultured bacterium]
Length = 169
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 71/127 (55%), Gaps = 15/127 (11%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAG +L + C + C GEARIT G++LP
Sbjct: 18 DAIVNSANRRLLGGGGVDGAIHRAAGEELYQECLILS------GCMEGEARITKGYRLPA 71
Query: 93 SHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGV--------SQ 143
VIHTVGP++ N + + D+LRS Y L + +N++ IAFP IS GV +Q
Sbjct: 72 KWVIHTVGPIYGNENGHEADMLRSCYMMSLYLAVDHNVKNIAFPNISTGVYGYPIEEAAQ 131
Query: 144 IMTHAIK 150
I A+K
Sbjct: 132 IAVDAVK 138
>gi|338529765|ref|YP_004663099.1| hypothetical protein LILAB_00445 [Myxococcus fulvus HW-1]
gi|337255861|gb|AEI62021.1| hypothetical protein LILAB_00445 [Myxococcus fulvus HW-1]
Length = 174
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 70/130 (53%), Gaps = 11/130 (8%)
Query: 12 TKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEA 71
+ L + +GDI++ +DAIV+ N L GG AIH AAGP L C +
Sbjct: 2 SDERLVLMRGDITQV----QADAIVNAANSALCGGGGVDGAIHRAAGPGLLAECRTLG-- 55
Query: 72 QPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQ 130
RCPPGEARIT G LP HVIH VGPV+ + E+ +L Y S+ + + +
Sbjct: 56 ----RCPPGEARITGGHGLPARHVIHAVGPVWQGGGSGEETLLARCYWRAFSLMEQHGLG 111
Query: 131 YIAFPAISCG 140
IAFP+IS G
Sbjct: 112 TIAFPSISTG 121
>gi|332663446|ref|YP_004446234.1| Appr-1-p processing protein [Haliscomenobacter hydrossis DSM 1100]
gi|332332260|gb|AEE49361.1| Appr-1-p processing domain protein [Haliscomenobacter hydrossis DSM
1100]
Length = 172
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 73/127 (57%), Gaps = 7/127 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ +GDI++ VD AIV+ N LL GG AIH A GP++ + C +I Q
Sbjct: 2 IEVIQGDITKIPVD----AIVNAANTSLLGGGGVDGAIHRAGGPEILEDCKKIRSKQGG- 56
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFN-FHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
CP G A IT KLP +VIHTVGPV+N N E +L SAY + L + + + IAF
Sbjct: 57 -CPVGTAVITTAGKLPAKYVIHTVGPVWNQGKSNEEALLASAYLSSLKLAVEHEVNTIAF 115
Query: 135 PAISCGV 141
P IS G+
Sbjct: 116 PNISTGI 122
>gi|157146265|ref|YP_001453584.1| hypothetical protein CKO_02022 [Citrobacter koseri ATCC BAA-895]
gi|334351223|sp|A8AI35.1|YMDB_CITK8 RecName: Full=O-acetyl-ADP-ribose deacetylase; AltName:
Full=Regulator of RNase III activity
gi|157083470|gb|ABV13148.1| hypothetical protein CKO_02022 [Citrobacter koseri ATCC BAA-895]
Length = 177
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 70/129 (54%), Gaps = 7/129 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K+ + + GDI++ VD IV+ N LL GG AIH AAGP L +AC ++ + Q
Sbjct: 2 KSRIHVQHGDITQLTVD----VIVNAANASLLGGGGVDGAIHRAAGPTLLEACKKVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQY 131
CP G A IT LP VIHTVGPV+ N +L AY N L + AN +
Sbjct: 58 G--ECPAGHAVITLAGNLPAKAVIHTVGPVWRGGDHNESQLLEDAYFNSLQLVLANGYRS 115
Query: 132 IAFPAISCG 140
+AFPAIS G
Sbjct: 116 VAFPAISTG 124
>gi|371776536|ref|ZP_09482858.1| Appr-1-p processing protein [Anaerophaga sp. HS1]
Length = 180
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 65/109 (59%), Gaps = 8/109 (7%)
Query: 34 AIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPVS 93
AIV+ N L +GG A AIH AAGP L++ C +P PGEA IT G LP
Sbjct: 25 AIVNAANAQLRMGGGVAGAIHRAAGPGLEEEC------RPLAPIKPGEAVITGGHNLPNP 78
Query: 94 HVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
+VIH +GPV+ H PE +L + Y+N L + + NNI IAFPAIS G+
Sbjct: 79 YVIHCLGPVYG-HDKPEAQLLANCYRNALRLAEKNNIHSIAFPAISTGI 126
>gi|170757183|ref|YP_001781859.1| hypothetical protein CLD_2328 [Clostridium botulinum B1 str. Okra]
gi|429245641|ref|ZP_19209020.1| RNase III inhibitor [Clostridium botulinum CFSAN001628]
gi|169122395|gb|ACA46231.1| putative RNAase regulator [Clostridium botulinum B1 str. Okra]
gi|428757394|gb|EKX79887.1| RNase III inhibitor [Clostridium botulinum CFSAN001628]
Length = 180
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 75/135 (55%), Gaps = 7/135 (5%)
Query: 8 LSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQ 67
+S S +KI KGDI++ V+ AIV+ N LL GG AIH A G + + C
Sbjct: 1 MSISYINKIKIIKGDITKENVN----AIVNAANSSLLGGGGVDGAIHRAGGNKILEECKI 56
Query: 68 IPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNF-HCNPEDILRSAYKNCLSVGKA 126
I +++ GEA IT G L +VIHTVGP+++ N E +L +AYKN L +
Sbjct: 57 IVSKIGQLKT--GEAVITSGGNLKAKYVIHTVGPIWHGGKSNEETLLANAYKNSLKLAAE 114
Query: 127 NNIQYIAFPAISCGV 141
NI+ IAFP IS GV
Sbjct: 115 KNIKTIAFPNISTGV 129
>gi|346466593|gb|AEO33141.1| hypothetical protein [Amblyomma maculatum]
Length = 276
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 62/109 (56%), Gaps = 10/109 (9%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAGP L+ C + CP GEA+IT G+KLP
Sbjct: 121 DAIVNAANNSLLGGGGVDGAIHSAAGPKLKAECATLNG------CPTGEAKITGGYKLPA 174
Query: 93 SHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
+VIHTVGPV E L S Y CL KA+ ++ +AFP IS GV
Sbjct: 175 KYVIHTVGPV----GENEAKLHSCYLTCLETLKAHKLRTVAFPCISTGV 219
>gi|302338776|ref|YP_003803982.1| Appr-1-p processing domain-containing protein [Spirochaeta
smaragdinae DSM 11293]
gi|301635961|gb|ADK81388.1| Appr-1-p processing domain protein [Spirochaeta smaragdinae DSM
11293]
Length = 181
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPG 80
GDI+ + DAIV+ N LL GG AIH A GP++ C +I + PPG
Sbjct: 18 GDITTF----KGDAIVNAANSTLLGGGGVDGAIHRAGGPEILAECKRIRSERLPGGLPPG 73
Query: 81 EARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISC 139
EA +T KLP VIHTVGP+++ E + L +AY+N L + + ++ +AFPAIS
Sbjct: 74 EAVLTGAGKLPTQKVIHTVGPIWHGGKQGEKETLSNAYRNALRLAADSGVERVAFPAIST 133
Query: 140 GV 141
GV
Sbjct: 134 GV 135
>gi|395507839|ref|XP_003758226.1| PREDICTED: O-acetyl-ADP-ribose deacetylase MACROD2 [Sarcophilus
harrisii]
Length = 305
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 74/135 (54%), Gaps = 14/135 (10%)
Query: 9 SFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQI 68
S S K SL +GDI+ +D AIV+ N LL GG IH AAGP L C +
Sbjct: 67 SLSEKVSL--YRGDITLLEID----AIVNAANASLLGGGGVDGCIHRAAGPCLVAECRNL 120
Query: 69 PEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNP--EDILRSAYKNCLSVGKA 126
C G+A+IT G+ LP +VIHTVGP+ H N ++ L + YK+ L + K
Sbjct: 121 S------GCETGQAKITCGYDLPAKYVIHTVGPIARGHINDSHKEDLANCYKSSLKLAKE 174
Query: 127 NNIQYIAFPAISCGV 141
NNI+ IAFP IS G+
Sbjct: 175 NNIRSIAFPCISTGI 189
>gi|238922400|ref|YP_002935914.1| RNA-directed RNA polymerase [Eubacterium eligens ATCC 27750]
gi|238874072|gb|ACR73780.1| RNA-directed RNA polymerase [Eubacterium eligens ATCC 27750]
Length = 170
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 71/127 (55%), Gaps = 10/127 (7%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+K GDI++ +D DAIV+ N LL GG AIH AGPDL K C +
Sbjct: 2 IKTVLGDITK--ID-YVDAIVNAANNSLLGGGGVDGAIHRVAGPDLLKECRTLH------ 52
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C GEA+IT G+ LP +VIHTVGP++ N E +L S Y + L + I+ IAF
Sbjct: 53 GCETGEAKITKGYNLPCDYVIHTVGPIWRGGKDNEEQLLASCYYHSLKLAMEKGIKRIAF 112
Query: 135 PAISCGV 141
P+IS GV
Sbjct: 113 PSISTGV 119
>gi|383458913|ref|YP_005372902.1| hypothetical protein COCOR_06951 [Corallococcus coralloides DSM
2259]
gi|380731235|gb|AFE07237.1| hypothetical protein COCOR_06951 [Corallococcus coralloides DSM
2259]
Length = 169
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 76/126 (60%), Gaps = 11/126 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L++ +GDI+R ++DAIV+ N L GG AIH AAGP+L C +
Sbjct: 5 LELIQGDITRI----AADAIVNAANSGLSGGGGVDGAIHRAAGPELLAECRTVG------ 54
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAF 134
RCP GEARIT G++LP +HVIH VGP + ED +L S Y++ ++ + + ++ +AF
Sbjct: 55 RCPTGEARITRGYRLPAAHVIHAVGPSWWGGDRGEDELLASCYRSTFALMEQHGLRTVAF 114
Query: 135 PAISCG 140
PAIS G
Sbjct: 115 PAISTG 120
>gi|297180209|gb|ADI16430.1| predicted phosphatase homologous to the C-terminal domain of
histone macroh2a1 [uncultured bacterium HF770_09N20]
Length = 170
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 87/170 (51%), Gaps = 14/170 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++I + DI+ VD AIV+ NE LL GG AIH AAGP+L C ++
Sbjct: 2 IEIREADITTLSVD----AIVNAANETLLGGGGVDGAIHLAAGPELLDHCRRLGG----- 52
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C G ARITPGF L VIHTVGPV+ + + LRS Y + + I+ IAF
Sbjct: 53 -CRTGSARITPGFALSARFVIHTVGPVWKDGQSGEAERLRSCYLESFRLAEEIRIKSIAF 111
Query: 135 PAISCGV---SQIMTHAIKLQTNCGFLESFWVELSAKVTTYDMDLIETAL 181
PAIS GV I +I +T +F V ++ + D+ + ETAL
Sbjct: 112 PAISTGVYGYPSIEAASIATKTMIENETNFDVIIACCFSAADVAVYETAL 161
>gi|239623594|ref|ZP_04666625.1| appr-1-p processing protein [Clostridiales bacterium 1_7_47_FAA]
gi|239521625|gb|EEQ61491.1| appr-1-p processing protein [Clostridiales bacterium 1_7_47FAA]
Length = 175
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 73/130 (56%), Gaps = 10/130 (7%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
KT ++ GDI++ + DAIV+ N LL GG AIH AAG +L C +
Sbjct: 2 KTKIQTVLGDITKI---QGMDAIVNAANSSLLGGGGVDGAIHRAAGKELLAECRLLGG-- 56
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHC-NPEDILRSAYKNCLSVGKANNIQY 131
C G+A++T G+ LP +++IHTVGPV+N N +L S Y+N L + I+
Sbjct: 57 ----CKTGQAKLTKGYGLPCTYIIHTVGPVWNGGTHNEAGLLASCYQNSLDIAVKKGIKK 112
Query: 132 IAFPAISCGV 141
IAFP+IS G+
Sbjct: 113 IAFPSISTGI 122
>gi|187922546|ref|YP_001894188.1| Appr-1-p processing protein [Burkholderia phytofirmans PsJN]
gi|187713740|gb|ACD14964.1| Appr-1-p processing domain protein [Burkholderia phytofirmans PsJN]
Length = 182
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 64/110 (58%), Gaps = 7/110 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAG +L + C + C G+A++T G++LP
Sbjct: 22 DAIVNAANTSLLGGGGVDGAIHRAAGKELVRECETLGG------CATGDAKLTAGYRLPA 75
Query: 93 SHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
HVIH VGPV+ + E D+L S Y+ L V + + IAFPAISCG+
Sbjct: 76 KHVIHAVGPVWRGGAHGEADLLASCYQRSLEVAREAQCKSIAFPAISCGI 125
>gi|319785782|ref|YP_004145257.1| Appr-1-p processing domain-containing protein [Pseudoxanthomonas
suwonensis 11-1]
gi|317464294|gb|ADV26026.1| Appr-1-p processing domain protein [Pseudoxanthomonas suwonensis
11-1]
Length = 168
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 71/127 (55%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++ + DI+ VD AIV+ N LL GG AIH AAGP L + C +
Sbjct: 5 MRAVQADITTLAVD----AIVNAANRSLLGGGGVDGAIHRAAGPGLLEECRALGG----- 55
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSA-YKNCLSVGKANNIQYIAF 134
CP GEARIT G +LP HVIHTVGPV+ E L +A Y+N L + +A+ +AF
Sbjct: 56 -CPTGEARITGGHRLPARHVIHTVGPVWQGGDAGERALLAACYRNSLVLAEAHACATLAF 114
Query: 135 PAISCGV 141
P+IS GV
Sbjct: 115 PSISTGV 121
>gi|303326682|ref|ZP_07357124.1| appr-1-p processing [Desulfovibrio sp. 3_1_syn3]
gi|302862670|gb|EFL85602.1| appr-1-p processing [Desulfovibrio sp. 3_1_syn3]
Length = 182
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 76/127 (59%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L+I +GDI+R VD +V+ NE LL GG AIH AAGP+L C +P
Sbjct: 8 LRIMEGDITRQAVD----VVVNAANEGLLGGGGVDGAIHRAAGPELLAVC------RPLD 57
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
CP GEA++TPGF+LP +VIHTVGPV+ + E +L SAY+ L A + +AF
Sbjct: 58 GCPTGEAKVTPGFRLPARYVIHTVGPVWRGGTHGEARLLASAYRRSLEEAVAVKARVVAF 117
Query: 135 PAISCGV 141
PAIS GV
Sbjct: 118 PAISTGV 124
>gi|349610698|ref|ZP_08890031.1| hypothetical protein HMPREF1028_02006 [Neisseria sp. GT4A_CT1]
gi|348609574|gb|EGY59310.1| hypothetical protein HMPREF1028_02006 [Neisseria sp. GT4A_CT1]
Length = 173
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 73/127 (57%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++ +GDI++ VD AIV+ N LL GG AIH AAG +L +AC ++
Sbjct: 4 FEVVEGDITKLEVD----AIVNAANASLLGGGGVDGAIHRAAGRELLEACRKLNG----- 54
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPV-FNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C GEA+IT G++LP VIHTVGPV F H + L AY+N L + + I+ IAF
Sbjct: 55 -CRTGEAKITQGYRLPAKFVIHTVGPVWFGGHRSEAVKLAEAYQNSLLLAQEYGIRSIAF 113
Query: 135 PAISCGV 141
P IS GV
Sbjct: 114 PCISTGV 120
>gi|452851791|ref|YP_007493475.1| conserved protein of unknown function [Desulfovibrio piezophilus]
gi|451895445|emb|CCH48324.1| conserved protein of unknown function [Desulfovibrio piezophilus]
Length = 181
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 73/128 (57%), Gaps = 8/128 (6%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDL-QKACYQIPEAQPR 74
L I + DI+ VD AIV+ N L GG +IH AAG DL AC I E+
Sbjct: 11 LFIRQDDITTLAVD----AIVNAANSELAGGGGVDGSIHHAAGRDLLHAACQVIIESIGS 66
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIA 133
+ P GEA +TPGF LP ++IHTVGP + E +LR+AY N L + ++I IA
Sbjct: 67 L--PVGEALLTPGFNLPARYIIHTVGPFWRGGTAHESHLLRNAYLNSLRLAHHHSITTIA 124
Query: 134 FPAISCGV 141
FPAISCGV
Sbjct: 125 FPAISCGV 132
>gi|363894520|ref|ZP_09321601.1| hypothetical protein HMPREF9629_01912 [Eubacteriaceae bacterium
ACC19a]
gi|361962271|gb|EHL15417.1| hypothetical protein HMPREF9629_01912 [Eubacteriaceae bacterium
ACC19a]
Length = 373
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 71/126 (56%), Gaps = 11/126 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L+I + DI++ VD AIV+ N LL GG AIH+AAG +L + C ++
Sbjct: 3 LEIIRADITKLKVD----AIVNAANSSLLGGGGVDGAIHKAAGKELLEECRKLN------ 52
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
C G A+IT G+ LP ++IHTVGP++ N E L + YKN L + K + I IAF
Sbjct: 53 GCNTGMAKITKGYNLPAKYIIHTVGPIYRGGNNNEKQELTNCYKNSLKLAKEHKINSIAF 112
Query: 135 PAISCG 140
P IS G
Sbjct: 113 PIISSG 118
>gi|363893331|ref|ZP_09320468.1| hypothetical protein HMPREF9630_01079 [Eubacteriaceae bacterium
CM2]
gi|361961429|gb|EHL14630.1| hypothetical protein HMPREF9630_01079 [Eubacteriaceae bacterium
CM2]
Length = 373
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 71/126 (56%), Gaps = 11/126 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L+I + DI++ VD AIV+ N LL GG AIH+AAG +L + C ++
Sbjct: 3 LEIIRADITKLEVD----AIVNAANSSLLGGGGVDGAIHKAAGKELLEECRKLN------ 52
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
C G A+IT G+ LP ++IHTVGP++ N E L + YKN L + K + I IAF
Sbjct: 53 GCNTGMAKITKGYNLPAKYIIHTVGPIYRGGNNNEKQELTNCYKNSLKLAKEHKINSIAF 112
Query: 135 PAISCG 140
P IS G
Sbjct: 113 PIISSG 118
>gi|152989804|ref|YP_001355526.1| hypothetical protein NIS_0052 [Nitratiruptor sp. SB155-2]
gi|151421665|dbj|BAF69169.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
Length = 175
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 73/128 (57%), Gaps = 11/128 (8%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
S+KI GDI++ VD AIV+ N LL GG AIH AAGP L + C + A
Sbjct: 2 SIKIILGDITKLPVD----AIVNAANPTLLGGGGVDGAIHRAAGPKLLEECKTLGGAN-- 55
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIA 133
PG+A+IT G+ LP VIHT GPV+ + E ILR Y+N L + ++ + IA
Sbjct: 56 ----PGQAKITHGYNLPAKWVIHTPGPVWRGGTHNEASILRHCYENSLCIARSYELYSIA 111
Query: 134 FPAISCGV 141
FP+IS GV
Sbjct: 112 FPSISTGV 119
>gi|124003564|ref|ZP_01688413.1| appr-1-p processing [Microscilla marina ATCC 23134]
gi|123991133|gb|EAY30585.1| appr-1-p processing [Microscilla marina ATCC 23134]
Length = 184
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 84/155 (54%), Gaps = 12/155 (7%)
Query: 10 FSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIP 69
++K S K +GD++ VD AIV+ N L GG AIH G D+ + CY+I
Sbjct: 1 MNSKISYK--QGDLTIEVVD----AIVNAANTSLRGGGGVDGAIHRKGGEDILRDCYKII 54
Query: 70 EAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANN 128
Q C GEA IT +LP H+IHTVGP ++ N E ++L+SAY N L + A+
Sbjct: 55 ARQGG--CKVGEAVITTAGRLPAKHIIHTVGPTWSGGYNNEKELLKSAYLNSLKLAVAHE 112
Query: 129 IQYIAFPAISCGVSQI---MTHAIKLQTNCGFLES 160
++ +AFP IS G+ + I ++T F+ES
Sbjct: 113 LKTVAFPNISTGIYKFPKRKAADIAIKTVSDFVES 147
>gi|333025445|ref|ZP_08453509.1| putative appr-1-p processing domain-containing protein
[Streptomyces sp. Tu6071]
gi|332745297|gb|EGJ75738.1| putative appr-1-p processing domain-containing protein
[Streptomyces sp. Tu6071]
Length = 174
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 75/130 (57%), Gaps = 14/130 (10%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L + +GD++R VD A+V+ N L GG A+H AAGP+L +A +
Sbjct: 9 LTVVRGDLTRQDVD----ALVNAANSSLQGGGGVDGALHRAAGPELARAGRDLAP----- 59
Query: 76 RCPPGEARITPGFKL--PVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVG-KANNIQY 131
C PG+A+ TP F+L PV HVIHTVGPV+ N E + L S Y+ CL V + ++
Sbjct: 60 -CRPGDAKATPAFRLSPPVRHVIHTVGPVWRGGGNGERETLASCYRRCLEVADELGDVTS 118
Query: 132 IAFPAISCGV 141
+AFP++S G+
Sbjct: 119 LAFPSLSTGI 128
>gi|83746887|ref|ZP_00943934.1| ATPase associated with chromosome architecture/replication
[Ralstonia solanacearum UW551]
gi|207742178|ref|YP_002258570.1| hypothetical protein RSIPO_00360 [Ralstonia solanacearum IPO1609]
gi|421899808|ref|ZP_16330171.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
gi|83726472|gb|EAP73603.1| ATPase associated with chromosome architecture/replication
[Ralstonia solanacearum UW551]
gi|206591014|emb|CAQ56626.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
gi|206593566|emb|CAQ60493.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
Length = 171
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 73/128 (57%), Gaps = 11/128 (8%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+L+ + DI+ DAIV+ N LL GG AIH AAGP+L +AC +
Sbjct: 7 TLRALRADITTL----ECDAIVNAANSSLLGGGGVDGAIHRAAGPELLEACRALHG---- 58
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSA-YKNCLSVGKANNIQYIA 133
C G+A+ITPGF LP +VIHTVGP++ E L +A Y+N L + K + ++ IA
Sbjct: 59 --CRTGQAKITPGFLLPARYVIHTVGPIWRGGRQDEAALLAACYRNSLELAKQHALRTIA 116
Query: 134 FPAISCGV 141
FP IS GV
Sbjct: 117 FPCISTGV 124
>gi|167617772|ref|ZP_02386403.1| Appr-1-p processing enzyme family domain protein [Burkholderia
thailandensis Bt4]
gi|257140367|ref|ZP_05588629.1| appr-1-p processing domain-containing protein [Burkholderia
thailandensis E264]
Length = 188
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 63/109 (57%), Gaps = 7/109 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAGP+L K C + C G+A++T G++LP
Sbjct: 33 DAIVNAANASLLGGGGVDGAIHRAAGPELVKECATLGG------CATGDAKLTRGYRLPA 86
Query: 93 SHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCG 140
+VIHTVGPV++ E ++L S Y+ L V IAFPAISCG
Sbjct: 87 KYVIHTVGPVWHGGKRGEAELLASCYRRSLEVAAGAGCTSIAFPAISCG 135
>gi|449495689|ref|XP_002197487.2| PREDICTED: O-acetyl-ADP-ribose deacetylase MACROD2 [Taeniopygia
guttata]
Length = 546
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 73/135 (54%), Gaps = 14/135 (10%)
Query: 9 SFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQI 68
S S K SL +GDI+ VD AIV+ N LL GG IH AAGP L C +
Sbjct: 67 SLSEKVSL--YRGDITLLEVD----AIVNAANSSLLGGGGVDGCIHRAAGPCLVAECRNL 120
Query: 69 PEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNP--EDILRSAYKNCLSVGKA 126
C G+A+IT G+ LP +VIHTVGP+ H ++ L S YK+ L + K
Sbjct: 121 S------GCETGQAKITCGYDLPAKYVIHTVGPIARGHLTDTHKENLASCYKSSLKLAKE 174
Query: 127 NNIQYIAFPAISCGV 141
NNI+ IAFP IS G+
Sbjct: 175 NNIRSIAFPCISTGI 189
>gi|167579695|ref|ZP_02372569.1| Appr-1-p processing enzyme family domain protein [Burkholderia
thailandensis TXDOH]
Length = 188
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 63/109 (57%), Gaps = 7/109 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAGP+L K C + C G+A++T G++LP
Sbjct: 33 DAIVNAANASLLGGGGVDGAIHRAAGPELVKECATLGG------CATGDAKLTRGYRLPA 86
Query: 93 SHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCG 140
+VIHTVGPV++ E ++L S Y+ L V IAFPAISCG
Sbjct: 87 KYVIHTVGPVWHGGKRGEAELLASCYRRSLEVAAGAGCTSIAFPAISCG 135
>gi|83720630|ref|YP_440979.1| appr-1-p processing domain-containing protein [Burkholderia
thailandensis E264]
gi|83654455|gb|ABC38518.1| Appr-1-p processing enzyme family domain protein [Burkholderia
thailandensis E264]
Length = 177
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 71/130 (54%), Gaps = 10/130 (7%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAGP+L K C + C G+A++T G++LP
Sbjct: 22 DAIVNAANASLLGGGGVDGAIHRAAGPELVKECATLGG------CATGDAKLTRGYRLPA 75
Query: 93 SHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCGVSQI---MTHA 148
+VIHTVGPV++ E ++L S Y+ L V IAFPAISCG + A
Sbjct: 76 KYVIHTVGPVWHGGKRGEAELLASCYRRSLEVAAGAGCTSIAFPAISCGAYRFPPGDATA 135
Query: 149 IKLQTNCGFL 158
I ++T G L
Sbjct: 136 IAVRTVTGAL 145
>gi|167540052|ref|XP_001741521.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165893937|gb|EDR22052.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 610
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 82/152 (53%), Gaps = 20/152 (13%)
Query: 1 MTFKVQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFT------AAAIH 54
+T K Q SF L + KGDI++ VD +IV+ N LLG F AIH
Sbjct: 102 ITLKEQGHSFLFSDKLALWKGDITKLSVD----SIVNAANN-QLLGCFVPHHLCIDNAIH 156
Query: 55 EAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVF-----NFHCNP 109
AGP L++ C+ I E Q + P G A+IT + LP ++IHTVGP+ HCN
Sbjct: 157 TFAGPQLRRDCFIIMEKQ-QFEEPTGYAKITRAYNLPSKYIIHTVGPIVKSKLKESHCN- 214
Query: 110 EDILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
+LRS+Y NCL++ +++ IAF IS G+
Sbjct: 215 --LLRSSYINCLNIADDLHLESIAFSCISTGI 244
>gi|21675028|ref|NP_663093.1| hypothetical protein CT2219 [Chlorobium tepidum TLS]
gi|25453351|sp|Q8KAE4.1|Y2219_CHLTE RecName: Full=Macro domain-containing protein CT2219
gi|21648263|gb|AAM73435.1| histone macro-H2A1-related protein [Chlorobium tepidum TLS]
Length = 172
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 74/123 (60%), Gaps = 11/123 (8%)
Query: 20 KGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPP 79
K DI+ VD AIV+ N LL GG AIH AAGP L +AC ++ C
Sbjct: 11 KADITSLTVD----AIVNAANTSLLGGGGVDGAIHRAAGPKLLEACRELGG------CLT 60
Query: 80 GEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAIS 138
GEA+IT G++LP + VIHTVGPV++ + E ++L S Y+N L + ++ + IAFP+IS
Sbjct: 61 GEAKITKGYRLPATFVIHTVGPVWHGGNHGEAELLASCYRNSLKLAIEHHCRTIAFPSIS 120
Query: 139 CGV 141
G+
Sbjct: 121 TGI 123
>gi|148380198|ref|YP_001254739.1| hypothetical protein CBO2247 [Clostridium botulinum A str. ATCC
3502]
gi|153931186|ref|YP_001384500.1| hypothetical protein CLB_2187 [Clostridium botulinum A str. ATCC
19397]
gi|153935842|ref|YP_001388016.1| hypothetical protein CLC_2170 [Clostridium botulinum A str. Hall]
gi|148289682|emb|CAL83786.1| Appr-1-p processing enzyme family protein [Clostridium botulinum A
str. ATCC 3502]
gi|152927230|gb|ABS32730.1| putative RNAase regulator [Clostridium botulinum A str. ATCC 19397]
gi|152931756|gb|ABS37255.1| putative RNAase regulator [Clostridium botulinum A str. Hall]
Length = 180
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 74/135 (54%), Gaps = 7/135 (5%)
Query: 8 LSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQ 67
+S S +KI KGDI++ V+ AIV+ N LL GG AIH A G + + C
Sbjct: 1 MSISYINKIKIIKGDITKENVN----AIVNAANSSLLGGGGVDGAIHRAGGNKILEECKS 56
Query: 68 IPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNF-HCNPEDILRSAYKNCLSVGKA 126
I +++ GEA IT G L +VIHTVGP+++ N E +L +AYKN +
Sbjct: 57 IVSKIGQLKT--GEAVITSGGNLKAKYVIHTVGPIWHGGKSNEETLLANAYKNSFKLAAE 114
Query: 127 NNIQYIAFPAISCGV 141
NI+ IAFP IS GV
Sbjct: 115 KNIKTIAFPNISTGV 129
>gi|421889632|ref|ZP_16320654.1| conserved hypothetical protein, UPF0189 family doamin [Ralstonia
solanacearum K60-1]
gi|378965003|emb|CCF97402.1| conserved hypothetical protein, UPF0189 family doamin [Ralstonia
solanacearum K60-1]
Length = 171
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 66/110 (60%), Gaps = 7/110 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAGP+L +AC + C G+A+ITPGF LP
Sbjct: 21 DAIVNAANSSLLGGGGVDGAIHRAAGPELLEACRTLHG------CRTGQAKITPGFLLPA 74
Query: 93 SHVIHTVGPVFNFHCNPEDILRSA-YKNCLSVGKANNIQYIAFPAISCGV 141
+VIHTVGP++ E L +A Y+N L + K + ++ IAFP IS GV
Sbjct: 75 RYVIHTVGPIWRGGRQDEAALLAACYRNSLELAKQHALRTIAFPCISTGV 124
>gi|219883110|ref|YP_002478272.1| Appr-1-p processing domain protein [Cyanothece sp. PCC 7425]
gi|219867235|gb|ACL47573.1| Appr-1-p processing domain protein [Cyanothece sp. PCC 7425]
Length = 187
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 69/127 (54%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAG-PDLQKACYQIPEAQPR 74
++ +GDI+ V+ AIV+ N L GG AI AAG LQ+AC QI
Sbjct: 14 FQVIQGDITTLEVE----AIVNAANNELKPGGGVCGAIFRAAGYKQLQQACEQIG----- 64
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
CP GEA ITPGF LP ++HTVGPV+ E++L Y+NCL ++ IAF
Sbjct: 65 -YCPTGEALITPGFNLPAQWIVHTVGPVYGVTWASEELLARCYRNCLQFAGEESLSSIAF 123
Query: 135 PAISCGV 141
P IS G+
Sbjct: 124 PLISTGI 130
>gi|300705310|ref|YP_003746913.1| hypothetical protein RCFBP_21153 [Ralstonia solanacearum CFBP2957]
gi|299072974|emb|CBJ44331.1| conserved protein of unknown function, UPF0189 family doamin
[Ralstonia solanacearum CFBP2957]
Length = 171
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 66/110 (60%), Gaps = 7/110 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAGP+L +AC + C G+A+ITPGF LP
Sbjct: 21 DAIVNAANSSLLGGGGVDGAIHRAAGPELLEACRALHG------CRTGQAKITPGFLLPA 74
Query: 93 SHVIHTVGPVFNFHCNPEDILRSA-YKNCLSVGKANNIQYIAFPAISCGV 141
+VIHTVGP++ E L +A Y+N L + K + ++ IAFP IS GV
Sbjct: 75 RYVIHTVGPIWRGGRQDEAALLAACYRNSLELAKQHALRTIAFPCISTGV 124
>gi|392564080|gb|EIW57258.1| A1pp-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 221
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 82/153 (53%), Gaps = 21/153 (13%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ + +GDI+ VD +IV+ N LL GG AIH AAGP L C +
Sbjct: 40 VSLYQGDITELDVD----SIVNAANRSLLGGGGVDGAIHAAAGPSLLDECRNLNG----- 90
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDI----LRSAYKNCLSVGKANNIQY 131
C G+A+IT G+ LP H+IHTVGPV++ + D+ L S YK L + N++++
Sbjct: 91 -CDTGDAKITKGYDLPARHIIHTVGPVYS--SSGVDVKAQQLASCYKTSLELAANNSLKH 147
Query: 132 IAFPAISCGVS----QIMTHAIKLQTNCGFLES 160
IAFP+IS G+ + TH I L FLES
Sbjct: 148 IAFPSISTGIYGYPIRDATH-IALDVVRRFLES 179
>gi|428206177|ref|YP_007090530.1| Appr-1-p processing protein [Chroococcidiopsis thermalis PCC 7203]
gi|428008098|gb|AFY86661.1| Appr-1-p processing domain protein [Chroococcidiopsis thermalis PCC
7203]
Length = 176
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 71/127 (55%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ + +GDI++ VD AIV+ N LL GG AIH AAG L C Q+
Sbjct: 5 ITVIQGDITQLQVD----AIVNAANNSLLGGGGVDGAIHRAAGSQLLAECRQLRG----- 55
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAF 134
C G A+IT G+ LP VIHTVGPV+ ED +L S Y++ L++ + I+ IAF
Sbjct: 56 -CATGAAKITQGYNLPAKWVIHTVGPVWEGGDRGEDELLASCYRSSLTLAVQHGIKTIAF 114
Query: 135 PAISCGV 141
PAIS GV
Sbjct: 115 PAISTGV 121
>gi|419841790|ref|ZP_14365153.1| macro domain protein [Fusobacterium necrophorum subsp. funduliforme
ATCC 51357]
gi|386904165|gb|EIJ68963.1| macro domain protein [Fusobacterium necrophorum subsp. funduliforme
ATCC 51357]
Length = 178
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 73/128 (57%), Gaps = 10/128 (7%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K+S+ + DI++ D IV+ N+ LL GG +IH AAGP+L + CY +
Sbjct: 7 KSSITLQITDITK----LECDCIVNAANKTLLGGGGVDGSIHRAAGPELLQECYHLH--- 59
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYI 132
C GEA+IT G++L VIHTVGP+++ + +L + Y N L++ K + I +
Sbjct: 60 ---GCNTGEAKITKGYQLKAKWVIHTVGPIYSGKKDDSLMLGNCYWNSLNLAKKSRIHSL 116
Query: 133 AFPAISCG 140
AFPAIS G
Sbjct: 117 AFPAISTG 124
>gi|419333657|ref|ZP_13875207.1| regulator of RNase III activity [Escherichia coli DEC12D]
gi|378188055|gb|EHX48664.1| regulator of RNase III activity [Escherichia coli DEC12D]
Length = 177
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
KT + + +GDI++ VD IV+ N L+ GG AIH AAGP L AC ++ + Q
Sbjct: 2 KTRIHVVQGDITKLAVD----VIVNAANPSLMGGGGVDGAIHRAAGPALLDACLKVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQY 131
P G A IT LP V+HTVGPV+ ED +L+ AY N L + AN+
Sbjct: 58 GDY--PTGHAVITLAGALPAKAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVAANSYTS 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 VAFPAISTGV 125
>gi|340755997|ref|ZP_08692634.1| hypothetical protein FSEG_02249 [Fusobacterium sp. D12]
gi|373113560|ref|ZP_09527785.1| hypothetical protein HMPREF9466_01818 [Fusobacterium necrophorum
subsp. funduliforme 1_1_36S]
gi|421501175|ref|ZP_15948148.1| macro domain protein [Fusobacterium necrophorum subsp. funduliforme
Fnf 1007]
gi|340573101|gb|EGR53915.1| hypothetical protein FSEG_02249 [Fusobacterium sp. D12]
gi|371654519|gb|EHO19887.1| hypothetical protein HMPREF9466_01818 [Fusobacterium necrophorum
subsp. funduliforme 1_1_36S]
gi|402266288|gb|EJU15728.1| macro domain protein [Fusobacterium necrophorum subsp. funduliforme
Fnf 1007]
Length = 178
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 73/128 (57%), Gaps = 10/128 (7%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K+S+ + DI++ D IV+ N+ LL GG AIH AAGP+L + CY +
Sbjct: 7 KSSITLQITDITK----LECDCIVNAANKTLLGGGGVDGAIHRAAGPELLQECYHLH--- 59
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYI 132
C GEA+IT G++L VIHTVGP+++ + +L + Y N L++ K + I +
Sbjct: 60 ---GCNTGEAKITKGYQLKAKWVIHTVGPIYSGKKDDSLMLGNCYWNSLNLAKESCIHSL 116
Query: 133 AFPAISCG 140
AFPAIS G
Sbjct: 117 AFPAISTG 124
>gi|429730490|ref|ZP_19265137.1| macro domain protein [Corynebacterium durum F0235]
gi|429147646|gb|EKX90670.1| macro domain protein [Corynebacterium durum F0235]
Length = 168
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 66/122 (54%), Gaps = 7/122 (5%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPG 80
GDI+ VD IV+ N LL GG AIH+ AGP L + C +I Q CP G
Sbjct: 8 GDITEADVD----VIVNAANTSLLGGGGVDGAIHQKAGPALLEECREIRSRQGG--CPVG 61
Query: 81 EARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISC 139
EA IT G LP HV+HTVGP + + E LRSAY N L + + + IAFP IS
Sbjct: 62 EAVITSGANLPARHVVHTVGPTWVDGSHGEEAALRSAYLNSLRLADKHGAETIAFPNIST 121
Query: 140 GV 141
GV
Sbjct: 122 GV 123
>gi|283796347|ref|ZP_06345500.1| RNase III regulator YmdB [Clostridium sp. M62/1]
gi|291075750|gb|EFE13114.1| macro domain protein [Clostridium sp. M62/1]
gi|295091573|emb|CBK77680.1| Predicted phosphatase homologous to the C-terminal domain of
histone macroH2A1 [Clostridium cf. saccharolyticum K10]
Length = 170
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 73/128 (57%), Gaps = 11/128 (8%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
KI GDI++ C +DAIV+ N LL GG AIH AAGP+L C +
Sbjct: 2 GFKIISGDITKCC----TDAIVNAANTSLLGGGGVDGAIHRAAGPELLAECRTLHG---- 53
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCN-PEDILRSAYKNCLSVGKANNIQYIA 133
C G A+IT G++LP +VIHT GPV+N + E++L S Y++ L + + + IA
Sbjct: 54 --CRTGMAKITKGYRLPARYVIHTPGPVWNGGSHGEEELLASCYRSSLELAVSYGLSSIA 111
Query: 134 FPAISCGV 141
FP+IS G+
Sbjct: 112 FPSISTGI 119
>gi|440288075|ref|YP_007340840.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Enterobacteriaceae bacterium strain FGI 57]
gi|440047597|gb|AGB78655.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Enterobacteriaceae bacterium strain FGI 57]
Length = 180
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 71/127 (55%), Gaps = 7/127 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ +GDI++ VD IV+ N L+ GG AIH AAGP L++AC + + Q
Sbjct: 5 IQVLQGDITQLDVD----VIVNAANPSLMGGGGVDGAIHRAAGPALEEACAVVRQQQG-- 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
CPPG A IT L VIHTVGPV+ + +L AY+N L + N Q +AF
Sbjct: 59 TCPPGHAVITHAGNLKAKAVIHTVGPVWKGGDAHEASLLEQAYRNSLQLALDNGYQSVAF 118
Query: 135 PAISCGV 141
PAIS GV
Sbjct: 119 PAISTGV 125
>gi|146311217|ref|YP_001176291.1| hypothetical protein Ent638_1561 [Enterobacter sp. 638]
gi|334351225|sp|A4W960.1|YMDB_ENT38 RecName: Full=O-acetyl-ADP-ribose deacetylase; AltName:
Full=Regulator of RNase III activity
gi|145318093|gb|ABP60240.1| Appr-1-p processing domain protein [Enterobacter sp. 638]
Length = 180
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 70/130 (53%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K +++ GDI+ VD IV+ N L+ GG AIH AAGP L +AC + + Q
Sbjct: 2 KPQIEVVVGDITTMEVD----VIVNAANPSLMGGGGVDGAIHRAAGPQLLEACKTVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
C PG A IT LP VIH VGPV+ N E L+ AY NCL + AN +
Sbjct: 58 G--ECAPGHAVITIAGDLPAKAVIHAVGPVWQGGENHEARTLQDAYLNCLRLAAANGYKT 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 LAFPAISTGV 125
>gi|73671071|ref|YP_307086.1| hypothetical protein Mbar_A3642 [Methanosarcina barkeri str.
Fusaro]
gi|72398233|gb|AAZ72506.1| conserved protein [Methanosarcina barkeri str. Fusaro]
Length = 176
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 70/127 (55%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ + +GDI + VD A+V+ N LL GG AIH AAGP L + C +
Sbjct: 8 ITVIQGDIVKLKVD----AVVNAANSTLLGGGGVDGAIHRAAGPGLLEECKGLKG----- 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAF 134
C GEA+IT G+ LP VIHTVGPV+ ED +L S Y+ L + K ++ IAF
Sbjct: 59 -CATGEAKITKGYFLPAKWVIHTVGPVWQGGQKGEDSLLASCYRKSLELAKEYAVKTIAF 117
Query: 135 PAISCGV 141
PAIS GV
Sbjct: 118 PAISTGV 124
>gi|415827355|ref|ZP_11514272.1| macro domain protein [Escherichia coli OK1357]
gi|323185833|gb|EFZ71194.1| macro domain protein [Escherichia coli OK1357]
Length = 177
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
KT + + +GDI++ VD IV+ N L+ G AIH +AGP L AC ++ + Q
Sbjct: 2 KTRIHVVQGDITKLAVD----VIVNAANPSLMGGSGVDGAIHRSAGPALLDACLKVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQY 131
CP G A IT LP V+HTVGPV+ ED +L+ AY N L + AN+
Sbjct: 58 GD--CPTGHAVITLAGALPAKAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVAANSYTS 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 VAFPAISTGV 125
>gi|153939644|ref|YP_001391547.1| hypothetical protein CLI_2297 [Clostridium botulinum F str.
Langeland]
gi|384462556|ref|YP_005675151.1| putative phosphatase [Clostridium botulinum F str. 230613]
gi|152935540|gb|ABS41038.1| putative phosphatase [Clostridium botulinum F str. Langeland]
gi|295319573|gb|ADF99950.1| putative phosphatase [Clostridium botulinum F str. 230613]
Length = 180
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 71/129 (55%), Gaps = 7/129 (5%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
+KI KGDI++ VD AIV+ N LL GG AIH A G + + C I
Sbjct: 7 NKIKIIKGDITKENVD----AIVNAANSSLLGGGGVDGAIHRAGGNKILEECKSIVSKIG 62
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNF-HCNPEDILRSAYKNCLSVGKANNIQYI 132
+++ GEA IT G L +VIHTVGP+++ N E +L +AYKN + NI+ I
Sbjct: 63 QLKT--GEAVITSGGNLKAKYVIHTVGPIWHGGKSNEETLLANAYKNSFKLAAEKNIKTI 120
Query: 133 AFPAISCGV 141
AFP IS GV
Sbjct: 121 AFPNISTGV 129
>gi|365897182|ref|ZP_09435199.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
gi|365422008|emb|CCE07741.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
Length = 162
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 65/110 (59%), Gaps = 7/110 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAGP+L C Q+ C G+A+IT G++LP
Sbjct: 4 DAIVNAANTSLLGGGGVDGAIHRAAGPELVMECRQLHG------CKTGDAKITKGYRLPA 57
Query: 93 SHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
+HVIHTVGPV+ ED +L S Y+ + + ++ +AFPAIS GV
Sbjct: 58 AHVIHTVGPVWQGGERGEDGLLASCYRRSIELCHDRSLASVAFPAISTGV 107
>gi|91772515|ref|YP_565207.1| ADP-ribose binding protein [Methanococcoides burtonii DSM 6242]
gi|91711530|gb|ABE51457.1| protein with ADP-ribose binding-domain, UPF0189 family
[Methanococcoides burtonii DSM 6242]
Length = 174
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 70/124 (56%), Gaps = 11/124 (8%)
Query: 18 ISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRC 77
++K DI + VD AIV+ N LL GG AIH+AAGP L + C + C
Sbjct: 8 VTKDDIVKLKVD----AIVNAANNSLLGGGGVDGAIHKAAGPQLLEECKYLD------GC 57
Query: 78 PPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPA 136
GEA+IT G+ LP +VIHTVGP++ + E + L Y+N L V N ++ IAFP+
Sbjct: 58 LTGEAKITSGYHLPAKYVIHTVGPIWKEGASGEGNKLAKCYRNSLKVAVKNGVRTIAFPS 117
Query: 137 ISCG 140
IS G
Sbjct: 118 ISTG 121
>gi|91201539|emb|CAJ74599.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 216
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 82/151 (54%), Gaps = 14/151 (9%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
++L+++ GDI+ + +DAIV+ N LL GG AIH GP + + C +I
Sbjct: 45 STLELTIGDITL----QDTDAIVNAANTTLLGGGGVDGAIHRVGGPKILEECKKIGG--- 97
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYI 132
CP GEAR+T G L +VIHTVGPV+ N + +L +AY+N L + ++ I
Sbjct: 98 ---CPTGEARVTAGGHLKARYVIHTVGPVYRGGEKNEQVLLENAYRNSLKAASDHAVKSI 154
Query: 133 AFPAISCGVSQI---MTHAIKLQTNCGFLES 160
+FP+IS G I L+T G+L++
Sbjct: 155 SFPSISTGAYGYPIDKASKIALKTVIGYLKN 185
>gi|262067179|ref|ZP_06026791.1| RNase III regulator YmdB [Fusobacterium periodonticum ATCC 33693]
gi|291379082|gb|EFE86600.1| RNase III regulator YmdB [Fusobacterium periodonticum ATCC 33693]
Length = 175
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 73/132 (55%), Gaps = 10/132 (7%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K +KI GDI++ D IV+ N L +GG AI AAG +L K C +I
Sbjct: 3 KDIIKIVSGDITKIP---EVDVIVNAANNYLEMGGGVCGAIFRAAGNELIKECKEIG--- 56
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
C GEA IT G+ LP ++IHTVGP ++ N E + LRSAY L + K N ++
Sbjct: 57 ---SCNTGEAVITKGYNLPNKYIIHTVGPRYSTGENGEAEKLRSAYYESLKLAKKNGLRK 113
Query: 132 IAFPAISCGVSQ 143
IAFP++S G+ +
Sbjct: 114 IAFPSVSTGIYR 125
>gi|427428574|ref|ZP_18918614.1| Putative ADP-ribose binding protein [Caenispirillum salinarum AK4]
gi|425881682|gb|EKV30366.1| Putative ADP-ribose binding protein [Caenispirillum salinarum AK4]
Length = 175
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 74/135 (54%), Gaps = 11/135 (8%)
Query: 8 LSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQ 67
+S S + +++ GDI+R S+DAIV+ N L GG A AI AAGP L +AC
Sbjct: 1 MSASARDRIEVVVGDITR----ESTDAIVNAANNELGPGGGVAGAIQRAAGPRLLEAC-- 54
Query: 68 IPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFN-FHCNPEDILRSAYKNCLSVGKA 126
+P C G+A+ T GF LP VIHTVGPV++ + E +L S Y+ L V
Sbjct: 55 ----EPLGGCETGDAKATEGFDLPARWVIHTVGPVWHGGDADEESLLASCYRRSLEVAVE 110
Query: 127 NNIQYIAFPAISCGV 141
++FPAIS G+
Sbjct: 111 IGAASVSFPAISTGI 125
>gi|194467239|ref|ZP_03073226.1| Appr-1-p processing domain protein [Lactobacillus reuteri 100-23]
gi|194454275|gb|EDX43172.1| Appr-1-p processing domain protein [Lactobacillus reuteri 100-23]
Length = 166
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 73/127 (57%), Gaps = 12/127 (9%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ + KGDI++ +DAIV+ N L+ GG AIH AAGP L AC +
Sbjct: 4 INVIKGDITKI----KADAIVNAANTTLM-GGGVDGAIHRAAGPALYGACEKFH------ 52
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAF 134
CP GEARIT GF LP +IHT GP+++ N ED +L ++Y N L + + Q +AF
Sbjct: 53 GCPTGEARITGGFNLPAKFIIHTPGPIWHGGDNGEDQLLANSYHNSLLLADKHLCQTVAF 112
Query: 135 PAISCGV 141
P+IS GV
Sbjct: 113 PSISTGV 119
>gi|345869856|ref|ZP_08821812.1| Appr-1-p processing domain protein [Thiorhodococcus drewsii AZ1]
gi|343922718|gb|EGV33417.1| Appr-1-p processing domain protein [Thiorhodococcus drewsii AZ1]
Length = 186
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 66/110 (60%), Gaps = 7/110 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ NE LL GG AIH AAGP+L C ++ C G+A+IT G++LP
Sbjct: 28 DAIVNAANESLLGGGGVDGAIHRAAGPELLAECRELGG------CATGDAKITRGYRLPA 81
Query: 93 SHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
VIHTVGPV+ N ++L S Y+ L + ++++ +AFP+IS GV
Sbjct: 82 RCVIHTVGPVWRQGRANESELLASCYRRSLELAATHSLRTLAFPSISTGV 131
>gi|46116674|ref|XP_384355.1| hypothetical protein FG04179.1 [Gibberella zeae PH-1]
Length = 220
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 70/131 (53%), Gaps = 10/131 (7%)
Query: 11 STKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPE 70
S + + +GDI+ +D AIV+ N+ L G AIH AAGPDL K E
Sbjct: 39 SINRRIGLIRGDITELRID----AIVNAANKSLRGGSGVDGAIHSAAGPDLVK------E 88
Query: 71 AQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQ 130
+ G+A IT G+KLP HVIHTVGP+F +P + L Y+ CL + N ++
Sbjct: 89 SGALGPIDTGDAVITKGYKLPAKHVIHTVGPIFGSERHPNEKLAMCYRECLKLAVENGVE 148
Query: 131 YIAFPAISCGV 141
IAF AIS G+
Sbjct: 149 TIAFSAISTGI 159
>gi|363890699|ref|ZP_09318015.1| hypothetical protein HMPREF9628_00586 [Eubacteriaceae bacterium
CM5]
gi|361964441|gb|EHL17476.1| hypothetical protein HMPREF9628_00586 [Eubacteriaceae bacterium
CM5]
Length = 373
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 69/126 (54%), Gaps = 11/126 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L+I + DI++ VD AIV+ N LL GG AIH+AAG L + C Q
Sbjct: 3 LEIIRADITKLEVD----AIVNAANSSLLGGGGVDGAIHKAAGKKLLEEC------QKLN 52
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
C G A+IT G+ LP ++IHTVGP++ N E L + YKN L + K + I IAF
Sbjct: 53 GCNTGMAKITKGYNLPAKYIIHTVGPIYRGGNNNEKQELTNCYKNSLKLAKEHKINSIAF 112
Query: 135 PAISCG 140
P IS G
Sbjct: 113 PIISSG 118
>gi|56475515|ref|YP_157104.1| hypothetical protein ebA148 [Aromatoleum aromaticum EbN1]
gi|56311558|emb|CAI06203.1| predicted phosphatase homologous to the C-terminal domain of
histone macroH2A1 [Aromatoleum aromaticum EbN1]
Length = 173
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 72/131 (54%), Gaps = 11/131 (8%)
Query: 12 TKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEA 71
++ L+ K DI+ VD AIV+ N LL GG AIH AAGP L C +
Sbjct: 2 SEAMLRAVKADITSLAVD----AIVNAANASLLGGGGVDGAIHRAAGPGLLAECRTLGG- 56
Query: 72 QPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQ 130
C GEA+IT G+ LP +VIHTVGPV++ + ED +L + Y L + + + ++
Sbjct: 57 -----CRTGEAKITGGYNLPARYVIHTVGPVWHGGQDGEDRLLAACYAQALRLAREHGVE 111
Query: 131 YIAFPAISCGV 141
IAFP IS GV
Sbjct: 112 RIAFPCISTGV 122
>gi|392375048|ref|YP_003206881.1| hypothetical protein DAMO_2000 [Candidatus Methylomirabilis
oxyfera]
gi|258592741|emb|CBE69050.1| conserved hypothetical protein; putative Appr-1-p processing enzyme
family protein [Candidatus Methylomirabilis oxyfera]
Length = 170
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 70/129 (54%), Gaps = 11/129 (8%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T L+ + DI+ VD AIV+ N LL GG AIH AAGP L C +
Sbjct: 2 TILRAVQADITTLAVD----AIVNAANSSLLGGGGVDGAIHRAAGPGLLAECRLLGG--- 54
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
C PG+ARIT G++LP +VIHTVGP++ + E +IL S Y L + + + +
Sbjct: 55 ---CEPGDARITKGYRLPAKYVIHTVGPIWRGGSHGEQEILASCYTRSLRLAAESGLTSV 111
Query: 133 AFPAISCGV 141
AFP IS GV
Sbjct: 112 AFPCISTGV 120
>gi|428214237|ref|YP_007087381.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Oscillatoria acuminata PCC 6304]
gi|428002618|gb|AFY83461.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Oscillatoria acuminata PCC 6304]
Length = 173
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 72/127 (56%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ + +GDI++ VD AIV+ N LL GG AIH AAG L C +
Sbjct: 6 ITVIQGDITKQQVD----AIVNAANTRLLGGGGVDGAIHRAAGSGLLAECRTLNG----- 56
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAF 134
C GEA++T G+ LP +VIHTVGPV+ N ED +L S Y L + + ++++ IAF
Sbjct: 57 -CETGEAKMTRGYNLPAKYVIHTVGPVWKGGRNHEDELLASCYYESLKLAEKHHLKTIAF 115
Query: 135 PAISCGV 141
PAIS GV
Sbjct: 116 PAISTGV 122
>gi|422022933|ref|ZP_16369439.1| Appr-1-p processing protein [Providencia sneebia DSM 19967]
gi|414094663|gb|EKT56327.1| Appr-1-p processing protein [Providencia sneebia DSM 19967]
Length = 176
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 71/130 (54%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
+ +++ +GDI++ ++DAIV+ N LL GG AIH A G D+ C QI Q
Sbjct: 2 QARIELQQGDITKI----NADAIVNAANSSLLGGGGVDGAIHRAGGGDILDECRQIRARQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQY 131
C PG+A IT KLP +VIHTVGPV+ N N IL AY + L + +
Sbjct: 58 GG--CKPGDAVITTAGKLPAKYVIHTVGPVWQNGSQNEAQILEKAYLSSLKLANQYKLNV 115
Query: 132 IAFPAISCGV 141
+AFP IS G+
Sbjct: 116 VAFPNISTGI 125
>gi|429082267|ref|ZP_19145352.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Cronobacter condimenti 1330]
gi|426549007|emb|CCJ71393.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Cronobacter condimenti 1330]
Length = 180
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 70/127 (55%), Gaps = 7/127 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ + +GDI+R +D IV+ N L+ GG AIH AAGP L AC + + Q
Sbjct: 5 ITVVQGDITRI----DTDVIVNAANPSLMGGGGVDGAIHRAAGPALLAACKVVRQQQGE- 59
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C PG A IT LPV V+HTVGPV+ N +L AY+N L++ AN +AF
Sbjct: 60 -CQPGHAVITEAGDLPVKAVVHTVGPVWRGGQDNEPQLLADAYRNSLALVTANGYSCVAF 118
Query: 135 PAISCGV 141
PAIS GV
Sbjct: 119 PAISTGV 125
>gi|346226760|ref|ZP_08847902.1| Appr-1-p processing domain-containing protein [Anaerophaga
thermohalophila DSM 12881]
Length = 179
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 68/123 (55%), Gaps = 11/123 (8%)
Query: 20 KGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPP 79
+GDI+ AIV+ N L +GG A AIH AAGP L++ C +P P
Sbjct: 14 RGDIASQS---DMQAIVNAANAQLRIGGGVAGAIHRAAGPGLEEEC------RPMAPIKP 64
Query: 80 GEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSA-YKNCLSVGKANNIQYIAFPAIS 138
GEA I+ G LP VIH +GPV+ PED L +A Y+N L + NNI IAFPAIS
Sbjct: 65 GEAVISGGHNLPNKFVIHCLGPVYGKD-KPEDKLLAACYRNALKLADENNIDSIAFPAIS 123
Query: 139 CGV 141
GV
Sbjct: 124 TGV 126
>gi|441504814|ref|ZP_20986806.1| Putative ADP-ribose binding protein [Photobacterium sp. AK15]
gi|441427396|gb|ELR64866.1| Putative ADP-ribose binding protein [Photobacterium sp. AK15]
Length = 167
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 65/116 (56%), Gaps = 7/116 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAGP+L C + C GEA++T G+ LP
Sbjct: 17 DAIVNAANNSLLGGGGVDGAIHRAAGPELLAECRTLG------GCETGEAKLTEGYSLPA 70
Query: 93 SHVIHTVGPVFN-FHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGVSQIMTH 147
+VIHTVGPV++ + N E +L S Y+ L + K ++ +AFP IS GV H
Sbjct: 71 KYVIHTVGPVWHGGNHNEEALLASCYRQSLMLAKQAGVKTVAFPCISTGVYHFPKH 126
>gi|332652922|ref|ZP_08418667.1| appr-1-p processing enzyme domain protein [Ruminococcaceae
bacterium D16]
gi|332518068|gb|EGJ47671.1| appr-1-p processing enzyme domain protein [Ruminococcaceae
bacterium D16]
Length = 332
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 72/127 (56%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L I + DI+ VD AIV+ E LL GG AIH AAGP+L C +
Sbjct: 3 LHIVRNDITTMKVD----AIVNAAKESLLGGGGVDGAIHRAAGPELLAECRTLGG----- 53
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
C G+A+IT G++LP VIHTVGP++ + E ++L SAY++ L + N+ + +AF
Sbjct: 54 -CKTGQAKITKGYRLPAKFVIHTVGPIWQGGSHGERELLVSAYRSSLELALGNHCETVAF 112
Query: 135 PAISCGV 141
P IS GV
Sbjct: 113 PLISSGV 119
>gi|417738024|ref|ZP_12386619.1| macro domain protein [Shigella flexneri 4343-70]
gi|332758588|gb|EGJ88908.1| macro domain protein [Shigella flexneri 4343-70]
Length = 170
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 20 KGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPP 79
+GDI++ VD IV+ N L+ GG AIH AAGP L AC ++ + Q CP
Sbjct: 2 QGDITKLAVD----VIVNAANPSLMGGGGVDGAIHRAAGPALLDACLKVRQQQG--DCPT 55
Query: 80 GEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAFPAIS 138
G A IT LP V+HTVGPV+ ED +L+ AY N L + AN+ +AFPAIS
Sbjct: 56 GHAVITLAGDLPAKAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVAANSYTSVAFPAIS 115
Query: 139 CGV 141
GV
Sbjct: 116 TGV 118
>gi|319793092|ref|YP_004154732.1| appr-1-p processing domain-containing protein [Variovorax paradoxus
EPS]
gi|315595555|gb|ADU36621.1| Appr-1-p processing domain protein [Variovorax paradoxus EPS]
Length = 173
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 74/128 (57%), Gaps = 11/128 (8%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+L+ + DI+ VD A+V+ N LL GG AIH AAGPDL C +
Sbjct: 4 ALRALRADITTLQVD----AVVNAANSSLLGGGGVDGAIHRAAGPDLVHECRLLSG---- 55
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIA 133
C G+A++T G++LP S++IHTVGPV+ + E ++L S Y+ +++ +Q IA
Sbjct: 56 --CKTGDAKLTQGYRLPASYIIHTVGPVWRGGTSGEPELLASCYRRSMAIAHERGMQTIA 113
Query: 134 FPAISCGV 141
FP+IS G+
Sbjct: 114 FPSISTGI 121
>gi|302763103|ref|XP_002964973.1| hypothetical protein SELMODRAFT_439181 [Selaginella moellendorffii]
gi|300167206|gb|EFJ33811.1| hypothetical protein SELMODRAFT_439181 [Selaginella moellendorffii]
Length = 804
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 86/153 (56%), Gaps = 15/153 (9%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR-VRCPP 79
GD+S+W VD SDA+++P N+ L G A + +AAG L A ++P+ P+ ++
Sbjct: 206 GDLSKWFVDGKSDAVIAPANKRLNTGPAVNAVLFKAAGSRLLDATQRLPDVAPQGIKAEV 265
Query: 80 GEARITPGFKLPVSHVIHTVGPVF------NFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
G+A T F LPVS VIHTVGPV+ N + E +++ AYK+ L + + N+ +A
Sbjct: 266 GDAISTRAFNLPVSRVIHTVGPVYKKNDQTNVRESDESLIK-AYKSALDIARKENLVNLA 324
Query: 134 FPAISC---GVSQIMTHAIKLQT---NC-GFLE 159
FP +SC G I + L+T NC GF +
Sbjct: 325 FPPLSCRIYGYPYIEGAEVGLRTLKENCEGFTQ 357
>gi|357023372|ref|ZP_09085574.1| hypothetical protein MEA186_01848 [Mesorhizobium amorphae
CCNWGS0123]
gi|355544794|gb|EHH13868.1| hypothetical protein MEA186_01848 [Mesorhizobium amorphae
CCNWGS0123]
Length = 176
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 71/125 (56%), Gaps = 11/125 (8%)
Query: 18 ISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRC 77
+ GDI++ VD AIV+ N LL GG AIH AAGP+L C + C
Sbjct: 10 VHTGDITKLEVD----AIVNAANSSLLGGGGVDGAIHRAAGPELLAECRMLNG------C 59
Query: 78 PPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPA 136
G+A++T G+ LP ++IHTVGPV+ E ++L S Y+ L + AN+ + +AFPA
Sbjct: 60 KTGDAKLTNGYGLPARYIIHTVGPVWQGGGKGEAELLASCYRRSLELAAANDCRTVAFPA 119
Query: 137 ISCGV 141
IS G+
Sbjct: 120 ISTGI 124
>gi|398803802|ref|ZP_10562816.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Polaromonas sp. CF318]
gi|398095666|gb|EJL86001.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Polaromonas sp. CF318]
Length = 172
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 73/129 (56%), Gaps = 11/129 (8%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
+L+ + DI+R +D AIV+ N LL GG AIH AAGP+L C +
Sbjct: 3 ATLRAVQVDITRLQLD----AIVNAANSSLLGGGGVDGAIHRAAGPELVHECRLLGG--- 55
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
C GEA++T G++LP +IHTVGPV+ N E ++L S Y+ + + A +I +
Sbjct: 56 ---CKTGEAKLTKGYRLPAKFIIHTVGPVWRGGGNGEPELLASCYRRSMEIAAAKDIASL 112
Query: 133 AFPAISCGV 141
AFP+IS G+
Sbjct: 113 AFPSISTGI 121
>gi|194224140|ref|XP_001915720.1| PREDICTED: MACRO domain-containing protein 2-like [Equus caballus]
Length = 449
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 73/135 (54%), Gaps = 14/135 (10%)
Query: 9 SFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQI 68
S S K SL +GDI+ VD AIV+ N LL GG IH AAGP L C +
Sbjct: 109 SLSEKVSL--YRGDITLLEVD----AIVNAANASLLGGGGVDGCIHRAAGPCLLAECRNL 162
Query: 69 PEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNP--EDILRSAYKNCLSVGKA 126
C G A+IT G+ LP +VIHTVGP+ H N ++ L + YK+ L + K
Sbjct: 163 N------GCDTGHAKITCGYDLPAKYVIHTVGPIARGHINGSHKEDLANCYKSSLELVKE 216
Query: 127 NNIQYIAFPAISCGV 141
NNI+ +AFP IS G+
Sbjct: 217 NNIRSVAFPCISTGI 231
>gi|159901067|ref|YP_001547314.1| appr-1-p processing domain-containing protein [Herpetosiphon
aurantiacus DSM 785]
gi|159894106|gb|ABX07186.1| Appr-1-p processing domain protein [Herpetosiphon aurantiacus DSM
785]
Length = 173
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 81/147 (55%), Gaps = 14/147 (9%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++I +GDI+++ + AIV+ N LL GG AIH AAGP L C +
Sbjct: 5 IEILQGDITKF----AGAAIVNAANSSLLGGGGVDGAIHRAAGPKLGLECLMLG------ 54
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
C G+A++T G++LPV +IHTVGPV+ E ++L + Y+ L + + ++ +AF
Sbjct: 55 GCKTGQAKMTKGYRLPVRSIIHTVGPVWQGGNKHEAELLTNCYQQSLELAAKHQLETLAF 114
Query: 135 PAISCGVSQI---MTHAIKLQTNCGFL 158
PAISCG+ + I +QT FL
Sbjct: 115 PAISCGIYGYPVELAAPIAIQTIANFL 141
>gi|282853474|ref|ZP_06262811.1| putative RNase III regulator YmdB [Propionibacterium acnes J139]
gi|386070948|ref|YP_005985844.1| RNase III inhibitor [Propionibacterium acnes ATCC 11828]
gi|422389869|ref|ZP_16469966.1| RNase III regulator YmdB [Propionibacterium acnes HL103PA1]
gi|422463898|ref|ZP_16540511.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL060PA1]
gi|422467480|ref|ZP_16544033.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL110PA4]
gi|422468780|ref|ZP_16545311.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL110PA3]
gi|422566208|ref|ZP_16641847.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL082PA2]
gi|422577005|ref|ZP_16652542.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL001PA1]
gi|282582927|gb|EFB88307.1| putative RNase III regulator YmdB [Propionibacterium acnes J139]
gi|314922217|gb|EFS86048.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL001PA1]
gi|314965299|gb|EFT09398.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL082PA2]
gi|314982455|gb|EFT26548.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL110PA3]
gi|315090554|gb|EFT62530.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL110PA4]
gi|315094059|gb|EFT66035.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL060PA1]
gi|327329396|gb|EGE71156.1| RNase III regulator YmdB [Propionibacterium acnes HL103PA1]
gi|353455314|gb|AER05833.1| RNase III inhibitor [Propionibacterium acnes ATCC 11828]
Length = 171
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 60/109 (55%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DA+V+ N L GG AIH AAGP+L +AC ++ E P G++ +T K+P
Sbjct: 17 DAVVNAANRQLAGGGGVDGAIHRAAGPELSQACRKLRETTLTDGLPTGQSVVTTAGKMPA 76
Query: 93 SHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
VIHTVGPV+ + D L S Y+ CL V + IAFP IS GV
Sbjct: 77 KWVIHTVGPVWAKTIDKSDQLASCYRTCLHVADEIGARTIAFPTISAGV 125
>gi|330467416|ref|YP_004405159.1| appr-1-p processing domain-containing protein [Verrucosispora maris
AB-18-032]
gi|328810387|gb|AEB44559.1| appr-1-p processing domain-containing protein [Verrucosispora maris
AB-18-032]
Length = 162
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 68/124 (54%), Gaps = 13/124 (10%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPG 80
GDI+R VD AIV+ NE LL GG AIH+AAGP L +A I C PG
Sbjct: 2 GDITREDVD----AIVTAANESLLGGGGVDGAIHQAAGPRLARAGGAIGP------CEPG 51
Query: 81 EARITPGFKL--PVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAI 137
A TP F L PV H+IH VGP++ + E D+L S Y+ L V + IAFPAI
Sbjct: 52 NAMATPAFDLNPPVRHIIHAVGPIWEGGGHGEADVLASCYRRSLQVADELGARSIAFPAI 111
Query: 138 SCGV 141
+ GV
Sbjct: 112 ATGV 115
>gi|13541550|ref|NP_111238.1| hypothetical protein TVN0719 [Thermoplasma volcanium GSS1]
gi|20178156|sp|Q97AU0.1|Y719_THEVO RecName: Full=Uncharacterized protein TV0719
gi|14324935|dbj|BAB59861.1| hypothetical protein [Thermoplasma volcanium GSS1]
Length = 186
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 75/135 (55%), Gaps = 5/135 (3%)
Query: 8 LSFSTKTSL-KISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACY 66
+SFS K +L +I +GDI+ D + +AIV+ N L+ GG AIH G + C
Sbjct: 2 VSFSYKGNLIEIIEGDIT----DVNCEAIVNAANPSLMGGGGVDGAIHLKGGKTIDLECA 57
Query: 67 QIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKA 126
++ + PPGEA IT G KL +VIHTVGP++ + L S+Y L + K
Sbjct: 58 ELRRTKWPKGLPPGEADITSGGKLKAKYVIHTVGPIYRGQEEDAETLYSSYYRSLEIAKI 117
Query: 127 NNIQYIAFPAISCGV 141
+ I+ IAFPAIS G+
Sbjct: 118 HGIKCIAFPAISTGI 132
>gi|429204563|ref|ZP_19195849.1| Appr-1-p processing domain-containing protein [Lactobacillus
saerimneri 30a]
gi|428147057|gb|EKW99287.1| Appr-1-p processing domain-containing protein [Lactobacillus
saerimneri 30a]
Length = 179
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 86/164 (52%), Gaps = 14/164 (8%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+ I +GDI++ V AIV+ N LL GG AIH AAGP+L C +
Sbjct: 3 QINIIQGDITQLDVT----AIVNAANPSLLGGGGVDGAIHRAAGPELLAECRTLHG---- 54
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIA 133
CP G A++T G++LP +VIHT GPV+ N E +LR++Y N L V + + +A
Sbjct: 55 --CPVGGAKLTQGYRLPAQYVIHTPGPVWQGGKNNEPQLLRNSYVNSLRVAEEHGCATVA 112
Query: 134 FPAISCGVSQI-MTHAIK--LQTNCGFLESFWVELSAKVTTYDM 174
FPAIS GV + A K LQT FL + V + Y++
Sbjct: 113 FPAISTGVYHYPLEEATKIALQTVNDFLANSQVVTEVTMVCYNV 156
>gi|121706196|ref|XP_001271361.1| LRP16 family protein [Aspergillus clavatus NRRL 1]
gi|119399507|gb|EAW09935.1| LRP16 family protein [Aspergillus clavatus NRRL 1]
Length = 353
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 65/114 (57%), Gaps = 11/114 (9%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
D IV+ N+ LL GG AIH AAGP L K C + C G+A+IT + LP
Sbjct: 55 DCIVNAANQCLLGGGGVDGAIHRAAGPGLLKECRTL------NGCRTGDAKITSAYNLPC 108
Query: 93 SHVIHTVGPVFNFHCN-----PEDILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
VIHTVGPV+++ + PE +LRS Y+ L + N+++ IAF AIS GV
Sbjct: 109 KKVIHTVGPVYHYEMSKSDDGPETLLRSCYRRSLELAVENDMKSIAFAAISTGV 162
>gi|307152055|ref|YP_003887439.1| Appr-1-p processing protein [Cyanothece sp. PCC 7822]
gi|306982283|gb|ADN14164.1| Appr-1-p processing domain protein [Cyanothece sp. PCC 7822]
Length = 173
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 72/122 (59%), Gaps = 11/122 (9%)
Query: 20 KGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPP 79
+GDI++ V+ AIV+ N LL GG AIH AAGP L + C ++ C
Sbjct: 10 QGDITKQAVE----AIVNAANPSLLGGGGVDGAIHRAAGPQLLEECRRLNG------CQT 59
Query: 80 GEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAFPAIS 138
GEA+IT G++L VIHTVGPV++ ED +L S Y++ L++ + I+ IAFPAIS
Sbjct: 60 GEAKITGGYRLAAKWVIHTVGPVWHGGNQQEDLLLASCYRHSLALAASQQIRSIAFPAIS 119
Query: 139 CG 140
G
Sbjct: 120 TG 121
>gi|306819423|ref|ZP_07453130.1| RNase III regulator YmdB [Mobiluncus mulieris ATCC 35239]
gi|304647715|gb|EFM45033.1| RNase III regulator YmdB [Mobiluncus mulieris ATCC 35239]
Length = 249
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 66/123 (53%), Gaps = 8/123 (6%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPG 80
GDI+R VD AIV+ N LL GG AIH AAGP+L AC I + P G
Sbjct: 8 GDITRVHVD----AIVNAANSTLLGGGGVDGAIHRAAGPELLAACRVIRATRYPDGLPVG 63
Query: 81 EARITPGFKLPVSHVIHTVGPVFNFHCNPED--ILRSAYKNCLSVGKANNIQYIAFPAIS 138
+A T GFKLP VIHTVGP N H D +LR+A+ N L +AFPAIS
Sbjct: 64 QAVATKGFKLPAKWVIHTVGP--NRHAGQTDPGLLRAAFVNSLREAARVGAHSVAFPAIS 121
Query: 139 CGV 141
GV
Sbjct: 122 GGV 124
>gi|261339348|ref|ZP_05967206.1| RNase III regulator YmdB [Enterobacter cancerogenus ATCC 35316]
gi|288318147|gb|EFC57085.1| RNase III regulator YmdB [Enterobacter cancerogenus ATCC 35316]
Length = 181
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 69/130 (53%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K ++I +GDI+ VD IV+ N L+ GG AIH AAGP L +AC + + Q
Sbjct: 2 KPQIEIVQGDITTLRVD----VIVNAANPSLMGGGGVDGAIHRAAGPQLLEACKVVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFN-FHCNPEDILRSAYKNCLSVGKANNIQY 131
CPPG A IT L VIH VGPV++ N IL Y+NCL + N
Sbjct: 58 G--ECPPGHAVITLAGDLNAKAVIHAVGPVWHGGDRNEASILEETYRNCLRLAADNGYNT 115
Query: 132 IAFPAISCGV 141
+AFPAIS GV
Sbjct: 116 MAFPAISTGV 125
>gi|210621529|ref|ZP_03292689.1| hypothetical protein CLOHIR_00632 [Clostridium hiranonis DSM 13275]
gi|210154728|gb|EEA85734.1| hypothetical protein CLOHIR_00632 [Clostridium hiranonis DSM 13275]
Length = 177
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 69/122 (56%), Gaps = 10/122 (8%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPG 80
GDI++ +AIV+ N LL GG AIH AAG +L C + C G
Sbjct: 8 GDITKQT---DVEAIVNAANNSLLGGGGVDGAIHRAAGRELLAECRTLN------GCETG 58
Query: 81 EARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISC 139
EA+IT +KLP +VIHTVGP++ + E +L +AYKN + + N I+ IAFP+IS
Sbjct: 59 EAKITSAYKLPCKYVIHTVGPIYRGGNSGEPQLLANAYKNSMKLALQNKIRTIAFPSIST 118
Query: 140 GV 141
GV
Sbjct: 119 GV 120
>gi|238921906|ref|YP_002935420.1| RNA-directed RNA polymerase [Eubacterium eligens ATCC 27750]
gi|238873578|gb|ACR73286.1| RNA-directed RNA polymerase [Eubacterium eligens ATCC 27750]
Length = 172
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 83/161 (51%), Gaps = 27/161 (16%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+K KGDI++ AIV+ N LL GG AIH AAGP+L C +
Sbjct: 4 IKTVKGDITKVT---DVQAIVNAANNSLLGGGGVDGAIHRAAGPELLAECRTLH------ 54
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCN-PEDILRSAYKNCLSVGKANNIQYIAF 134
C GEA+IT + LP +VIHTVGP++N + E++L + Y N + + N I+ IAF
Sbjct: 55 GCVTGEAKITKAYNLPCDYVIHTVGPIWNGGRDREEELLANCYFNSMKLAMDNGIRSIAF 114
Query: 135 PAISCGVSQIMTHAIKLQTNCGFLESFWVELSAKVTTYDMD 175
P+IS G+ SF VEL+AK+ + ++
Sbjct: 115 PSISTGIY-----------------SFPVELAAKIAVHTVN 138
>gi|387790026|ref|YP_006255091.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Solitalea canadensis DSM 3403]
gi|379652859|gb|AFD05915.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Solitalea canadensis DSM 3403]
Length = 170
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 69/127 (54%), Gaps = 7/127 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ K DI+ VD A+V+ N LL GG AIH G + + C +I E Q
Sbjct: 3 IEVIKADITTIAVD----AVVNAANSSLLGGGGVDGAIHRKGGSSILEECIKIRERQGG- 57
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRS-AYKNCLSVGKANNIQYIAF 134
C GEA IT LP HVIHTVGP++N N ED+L S Y N L + N+ + +AF
Sbjct: 58 -CSTGEAVITTAGNLPAKHVIHTVGPIWNGGNNNEDLLLSNCYTNSLRLAIDNSCKTVAF 116
Query: 135 PAISCGV 141
P IS GV
Sbjct: 117 PNISTGV 123
>gi|291458200|ref|ZP_06597590.1| ADP-ribosylglycohydrolase family protein [Oribacterium sp. oral
taxon 078 str. F0262]
gi|291418733|gb|EFE92452.1| ADP-ribosylglycohydrolase family protein [Oribacterium sp. oral
taxon 078 str. F0262]
Length = 592
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 72/122 (59%), Gaps = 12/122 (9%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPG 80
GDI++ V+ AIV+ N+ LL GG AIH AAGP L + C ++ C G
Sbjct: 423 GDITKIDVE----AIVNAANKSLLGGGGVDGAIHRAAGPGLLEECRKLN------GCEVG 472
Query: 81 EARITPGFKLPVSHVIHTVGPVFNFHCNP--EDILRSAYKNCLSVGKANNIQYIAFPAIS 138
EA+IT G+ L ++VIHTVGP +N P E +L++ Y N L + K +++ IAFPAIS
Sbjct: 473 EAKITGGWLLKANYVIHTVGPRYNPKKKPDCERLLKNCYYNSLELAKEHDLHTIAFPAIS 532
Query: 139 CG 140
G
Sbjct: 533 TG 534
>gi|309775104|ref|ZP_07670116.1| appr-1-p processing enzyme domain protein [Erysipelotrichaceae
bacterium 3_1_53]
gi|308917059|gb|EFP62787.1| appr-1-p processing enzyme domain protein [Erysipelotrichaceae
bacterium 3_1_53]
Length = 167
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 79/143 (55%), Gaps = 14/143 (9%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
++I DI+R VD AIV+ N LL GG AIH AAG L K C +
Sbjct: 2 KIEILTADITRLQVD----AIVNAANTSLLGGGRVDGAIHRAAGAQLLKECRALHG---- 53
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFN-FHCNPEDILRSAYKNCLSVGKANNIQYIA 133
C GEA+IT G++LP +VIHT GP+++ N + +L S Y++C+ + + +I+ IA
Sbjct: 54 --CRTGEAKITKGYQLPCRYVIHTPGPIWHGGKQNEQMLLESCYRSCMLLAEQYHIKSIA 111
Query: 134 FPAISCGVSQI---MTHAIKLQT 153
FPAIS G + + I LQT
Sbjct: 112 FPAISTGAYRFPLKLAAQIALQT 134
>gi|381183042|ref|ZP_09891809.1| RNase III inhibitor [Listeriaceae bacterium TTU M1-001]
gi|380317053|gb|EIA20405.1| RNase III inhibitor [Listeriaceae bacterium TTU M1-001]
Length = 179
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 74/129 (57%), Gaps = 7/129 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ + +GDI++ VD A+V+ N LL GG AIH+AAGP+L AC +I +
Sbjct: 3 IHLQQGDITKLKVD----ALVNAANNTLLGGGGVDGAIHQAAGPELLAACKEIIDKIG-- 56
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
C GEA IT GF+L +VIHTVGP+++ E ++L S Y L + ++ IAF
Sbjct: 57 SCATGEAVITKGFQLEARYVIHTVGPIWHGGDKREPNLLASCYWKSLELAAYKELRSIAF 116
Query: 135 PAISCGVSQ 143
P IS G+ Q
Sbjct: 117 PNISTGIYQ 125
>gi|423335022|ref|ZP_17312800.1| conserved hypothetical protein [Lactobacillus reuteri ATCC 53608]
gi|337728543|emb|CCC03649.1| conserved hypothetical protein [Lactobacillus reuteri ATCC 53608]
Length = 167
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 71/127 (55%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ + KGDI++ VD AIV+ N L+ GG AIH AGP L AC +
Sbjct: 4 INVIKGDITKIKVD----AIVNAANTTLMGGGGVDGAIHRVAGPALYGACEKFHG----- 54
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAF 134
CP GEARIT GF LP +IHT GP+++ N ED +L ++Y N L + + +AF
Sbjct: 55 -CPTGEARITGGFNLPAKFIIHTPGPIWHGGDNGEDQLLANSYHNSLLLADKYLCRTVAF 113
Query: 135 PAISCGV 141
P+IS GV
Sbjct: 114 PSISTGV 120
>gi|307701665|ref|ZP_07638681.1| macro domain protein [Mobiluncus mulieris FB024-16]
gi|307613168|gb|EFN92421.1| macro domain protein [Mobiluncus mulieris FB024-16]
Length = 258
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 66/123 (53%), Gaps = 8/123 (6%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPG 80
GDI+R VD AIV+ N LL GG AIH AAGP+L AC I + P G
Sbjct: 8 GDITRVHVD----AIVNAANSTLLGGGGVDGAIHRAAGPELLAACRVIRATRYPDGLPVG 63
Query: 81 EARITPGFKLPVSHVIHTVGPVFNFHCNPED--ILRSAYKNCLSVGKANNIQYIAFPAIS 138
+A T GFKLP VIHTVGP N H D +LR+A+ N L +AFPAIS
Sbjct: 64 QAVATKGFKLPAKWVIHTVGP--NRHAGQTDPGLLRAAFVNSLREAARVGAHSVAFPAIS 121
Query: 139 CGV 141
GV
Sbjct: 122 GGV 124
>gi|315504163|ref|YP_004083050.1| appr-1-p processing domain-containing protein [Micromonospora sp.
L5]
gi|315410782|gb|ADU08899.1| Appr-1-p processing domain protein [Micromonospora sp. L5]
Length = 168
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 71/129 (55%), Gaps = 13/129 (10%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ GDI+R VD A+V+ NE LL GG AIH AAGP L +A +
Sbjct: 2 IEVVLGDITREDVD----AVVTAANESLLGGGGVDGAIHRAAGPRLAQAGAALAP----- 52
Query: 76 RCPPGEARITPGFKL--PVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
C PG+A TP F L PV HVIHTVGPV+ E D+L S Y+ L V + +
Sbjct: 53 -CDPGDAVATPAFDLDPPVRHVIHTVGPVWEGGGYGEADVLASCYRRSLEVADEIAARRV 111
Query: 133 AFPAISCGV 141
AFPAI+ GV
Sbjct: 112 AFPAIATGV 120
>gi|167901139|ref|ZP_02488344.1| hypothetical protein BpseN_02594 [Burkholderia pseudomallei NCTC
13177]
Length = 188
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 63/110 (57%), Gaps = 7/110 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AI AAGP+L K C + C G+A++T G++LP
Sbjct: 33 DAIVNAANASLLGGGGVDGAIQRAAGPELVKECATLGG------CATGDAKLTRGYRLPA 86
Query: 93 SHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
+VIHTVGPV+ + E ++L S Y+ L V IAFPAISCGV
Sbjct: 87 KYVIHTVGPVWRGGGHGEAELLASCYRRSLEVAAGAGCASIAFPAISCGV 136
>gi|270013509|gb|EFA09957.1| hypothetical protein TcasGA2_TC012114 [Tribolium castaneum]
Length = 261
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 72/135 (53%), Gaps = 14/135 (10%)
Query: 7 TLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACY 66
+L+ S + I +GDI+ +D AIV+ N LL GG AIH AAGP+L C
Sbjct: 88 SLNSSLCKKVSIFQGDITTLEID----AIVNAANTSLLGGGGVDGAIHRAAGPNLLAECK 143
Query: 67 QIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKA 126
+ CP G+A IT G+KLP +VIHTVGP +L+ Y+NCL +
Sbjct: 144 TLN------GCPTGDAVITGGYKLPAKYVIHTVGP----RGEKPGLLQQCYRNCLKIMAE 193
Query: 127 NNIQYIAFPAISCGV 141
+Q +AFP IS G+
Sbjct: 194 RKLQTVAFPCISTGI 208
>gi|261368603|ref|ZP_05981486.1| RNase III regulator YmdB [Subdoligranulum variabile DSM 15176]
gi|282569327|gb|EFB74862.1| macro domain protein [Subdoligranulum variabile DSM 15176]
Length = 176
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 73/127 (57%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L+I + DI+ VD AIV+ NE LL GG AIH AAGP L + C +
Sbjct: 3 LQIVQNDITTMKVD----AIVNAANESLLGGGGVDGAIHRAAGPGLLQECRTLGG----- 53
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAF 134
C G+A+IT G++LP VIHTVGPV+ + E +L SAY++ L + A + + +AF
Sbjct: 54 -CQTGQAKITKGYRLPARFVIHTVGPVWRGGGHGERALLVSAYRSSLELALAYHCETVAF 112
Query: 135 PAISCGV 141
P IS GV
Sbjct: 113 PLISSGV 119
>gi|408388001|gb|EKJ67697.1| hypothetical protein FPSE_12144 [Fusarium pseudograminearum CS3096]
Length = 220
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 10/131 (7%)
Query: 11 STKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPE 70
S + + +GDI+ +D AIV+ N+ L G AIH AAGPDL K E
Sbjct: 39 SINRRIGLIRGDITELRID----AIVNAANKSLRGGSGVDGAIHSAAGPDLVK------E 88
Query: 71 AQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQ 130
++ G+A IT G+ LP HVIHTVGP+F +P + L Y+ CL + N ++
Sbjct: 89 SRALGPIDTGDAVITKGYNLPAKHVIHTVGPIFGNERHPNEKLTMCYRECLKLAVENGVE 148
Query: 131 YIAFPAISCGV 141
IAF AIS G+
Sbjct: 149 TIAFSAISTGI 159
>gi|407921097|gb|EKG14263.1| Appr-1-p processing [Macrophomina phaseolina MS6]
Length = 294
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 61/112 (54%), Gaps = 9/112 (8%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ NE LL GG AIH AAGPDL C + C G A+IT G++LP
Sbjct: 56 DAIVNAANESLLGGGGVDGAIHRAAGPDLLDECKTLG------GCDTGSAKITKGYRLPA 109
Query: 93 SHVIHTVGPVFNFHCNP---EDILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
H+IH VGPV++ E +LR Y+ L + N + IAF A+S GV
Sbjct: 110 KHIIHAVGPVYSSAKRKGVHETLLRGCYRTSLDLASKNGCRSIAFSALSTGV 161
>gi|170760213|ref|YP_001787623.1| hypothetical protein CLK_1688 [Clostridium botulinum A3 str. Loch
Maree]
gi|169407202|gb|ACA55613.1| putative RNAase regulator [Clostridium botulinum A3 str. Loch
Maree]
Length = 180
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 72/135 (53%), Gaps = 7/135 (5%)
Query: 8 LSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQ 67
+S S +KI KGDI++ VD AIV+ N LL GG AIH G + + C
Sbjct: 1 MSISYINKIKIVKGDITKENVD----AIVNAANSSLLGGGGVDGAIHREGGNKILEECKS 56
Query: 68 IPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNF-HCNPEDILRSAYKNCLSVGKA 126
I ++ G+A IT G L +VIHTVGP+++ N E +L +AYKN +
Sbjct: 57 IVSKIGSLKT--GDAVITSGGNLKAKYVIHTVGPIWHGGKTNEETLLSNAYKNSFKLAAE 114
Query: 127 NNIQYIAFPAISCGV 141
NI+ IAFP IS GV
Sbjct: 115 KNIKTIAFPNISTGV 129
>gi|188585872|ref|YP_001917417.1| Appr-1-p processing protein [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350559|gb|ACB84829.1| Appr-1-p processing domain protein [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 176
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 67/126 (53%), Gaps = 9/126 (7%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+LKI+KGDI+ AIV+ N L GG A AIH AGP+L++ C Q
Sbjct: 9 TLKITKGDIANQ---NDVQAIVNAANRELRTGGGVAGAIHRGAGPELEQECRQY------ 59
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
PGEA IT LP +VIH +GPV+ +++L YKN L + I+ +AF
Sbjct: 60 APITPGEAVITGAHNLPNDYVIHCLGPVYGVDKPHDELLIKCYKNVLKKADEHEIRSVAF 119
Query: 135 PAISCG 140
PAIS G
Sbjct: 120 PAISTG 125
>gi|154500875|ref|ZP_02038913.1| hypothetical protein BACCAP_04560 [Bacteroides capillosus ATCC
29799]
gi|150270375|gb|EDM97701.1| macro domain protein [Pseudoflavonifractor capillosus ATCC 29799]
Length = 331
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 70/126 (55%), Gaps = 11/126 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L I + DI+ VD AIV+ E LL GG AIH AAGP+L C +
Sbjct: 3 LHIVRNDITTMRVD----AIVNAAKESLLGGGGVDGAIHRAAGPELLAECRTLGG----- 53
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
C G+A++T G++LP VIHTVGP++ + E D+L SAY++ L + AN +AF
Sbjct: 54 -CKTGQAKLTKGYRLPARFVIHTVGPIWQGGSHGERDLLVSAYRSSLELALANKCGTVAF 112
Query: 135 PAISCG 140
P IS G
Sbjct: 113 PLISAG 118
>gi|395227708|ref|ZP_10406034.1| UPF0189 protein ymdB [Citrobacter sp. A1]
gi|421844265|ref|ZP_16277423.1| hypothetical protein D186_04490 [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|424728589|ref|ZP_18157194.1| protein ymdb [Citrobacter sp. L17]
gi|394719036|gb|EJF24657.1| UPF0189 protein ymdB [Citrobacter sp. A1]
gi|411774420|gb|EKS57910.1| hypothetical protein D186_04490 [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|422896460|gb|EKU36242.1| protein ymdb [Citrobacter sp. L17]
gi|455642287|gb|EMF21453.1| hypothetical protein H262_17656 [Citrobacter freundii GTC 09479]
Length = 180
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 69/129 (53%), Gaps = 7/129 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
++ + + GDI+ VD IV+ N LL GG AIH AAGP L AC Q+ + Q
Sbjct: 2 QSRVHVLHGDITTIAVD----VIVNAANPSLLGGGGVDGAIHRAAGPALLAACKQVIQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
CP G A IT LP VIHTVGPV+ + E + L AY N L + AN Q
Sbjct: 58 G--ECPTGHAVITLAGNLPARAVIHTVGPVWQGGDHHEAERLEEAYFNSLQLALANGYQS 115
Query: 132 IAFPAISCG 140
IAFPAIS G
Sbjct: 116 IAFPAISTG 124
>gi|67465341|ref|XP_648855.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56465143|gb|EAL43466.1| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS]
gi|449704609|gb|EMD44820.1| Appr1-p processing domain containing protein [Entamoeba histolytica
KU27]
Length = 627
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 80/152 (52%), Gaps = 20/152 (13%)
Query: 1 MTFKVQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFT------AAAIH 54
+T K Q SF L + KGDI++ CVD AIV+ N LLG F AIH
Sbjct: 119 ITLKEQGHSFLFSNKLALWKGDITKLCVD----AIVNAANN-QLLGCFVPHHLCIDNAIH 173
Query: 55 EAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVF-----NFHCNP 109
AGP L++ C I Q P G A++T + LP +VIHTVGP+ HCN
Sbjct: 174 TFAGPQLRRDCSIIMNKQG-FEEPTGYAKVTRAYNLPSKYVIHTVGPIVESQLKESHCN- 231
Query: 110 EDILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
+LRS+Y NCL++ +++ IAF IS G+
Sbjct: 232 --LLRSSYINCLNIADDLHLESIAFSCISTGL 261
>gi|95928250|ref|ZP_01310998.1| Appr-1-p processing [Desulfuromonas acetoxidans DSM 684]
gi|95135521|gb|EAT17172.1| Appr-1-p processing [Desulfuromonas acetoxidans DSM 684]
Length = 193
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 74/129 (57%), Gaps = 11/129 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++I K DI++ VD AIV+ LL G AIH+AAGP+L + C ++
Sbjct: 4 IEIIKADITQLNVD----AIVNTATTKLLGSGGVDGAIHDAAGPELMEECRRLKG----- 54
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFN-FHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C G A+IT G+ LP +VIHTVGP ++ N + +L S Y+ C S+ + ++ +AF
Sbjct: 55 -CLVGTAKITSGYNLPARYVIHTVGPQWDEGQGNEQALLASCYRACFSLAREYGLKTLAF 113
Query: 135 PAISCGVSQ 143
PAISCG Q
Sbjct: 114 PAISCGSYQ 122
>gi|296283674|ref|ZP_06861672.1| tryptophan--tRNA ligase [Citromicrobium bathyomarinum JL354]
Length = 173
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 70/130 (53%), Gaps = 13/130 (10%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T++ + GDI+ DAIV+ N LL GG AIH AAGPDL + C +
Sbjct: 4 TAIDVEAGDITTM----QFDAIVNAANSSLLGGGGVDGAIHRAAGPDLLEECRSLGG--- 56
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNF--HCNPEDILRSAYKNCLSVGKANNIQY 131
C G+A++T G++LP SHVIHTVGPV+ H PE L S Y+ L+ +
Sbjct: 57 ---CETGQAKVTKGYRLPASHVIHTVGPVWRGGDHGEPEQ-LASCYRESLARAAEIGARS 112
Query: 132 IAFPAISCGV 141
+ PAIS G+
Sbjct: 113 VGIPAISTGI 122
>gi|170691542|ref|ZP_02882707.1| Appr-1-p processing domain protein [Burkholderia graminis C4D1M]
gi|170143747|gb|EDT11910.1| Appr-1-p processing domain protein [Burkholderia graminis C4D1M]
Length = 250
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 64/110 (58%), Gaps = 7/110 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAG +L + C + C G+A++T G++LP
Sbjct: 22 DAIVNAANTSLLGGGGVDGAIHRAAGNELLRECEALGG------CATGDAKLTRGYRLPA 75
Query: 93 SHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
+VIH VGPV+ + E D+L S Y+ L V + N IAFPAISCG+
Sbjct: 76 RYVIHAVGPVWRGGTHGEADLLASCYQRSLEVAREANCASIAFPAISCGI 125
>gi|429119010|ref|ZP_19179754.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Cronobacter sakazakii 680]
gi|426326560|emb|CCK10491.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Cronobacter sakazakii 680]
Length = 180
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 68/127 (53%), Gaps = 7/127 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ + +GDI+R VD IV+ N L+ GG AIH AAGP L AC Q+ + Q
Sbjct: 5 INVVQGDITRINVD----VIVNAANPSLMGGGGVDGAIHRAAGPTLLAACRQVRQQQG-- 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C PG A IT L V+HTVGPV+ N +L AY+N L + AN +AF
Sbjct: 59 ECQPGHAVITEAGDLAAKAVVHTVGPVWRGGQDNEPQLLADAYRNSLQLVAANGYNSVAF 118
Query: 135 PAISCGV 141
PAIS G+
Sbjct: 119 PAISTGI 125
>gi|119897780|ref|YP_932993.1| hypothetical protein azo1489 [Azoarcus sp. BH72]
gi|119670193|emb|CAL94106.1| conserved hypothetical protein [Azoarcus sp. BH72]
Length = 172
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 66/110 (60%), Gaps = 7/110 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAG +L +AC ++ C PG+A+ITPGF L
Sbjct: 18 DAIVNAANRSLLGGGGVDGAIHRAAGFELLEACRKLGG------CEPGDAKITPGFLLKA 71
Query: 93 SHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
+V+HTVGP+++ E ++L S Y CL V + ++ IAFP IS GV
Sbjct: 72 RYVVHTVGPIWHGGTRGEAEVLASCYWRCLEVAAEHGVRSIAFPCISTGV 121
>gi|260597416|ref|YP_003209987.1| RNase III inhibitor [Cronobacter turicensis z3032]
gi|334351224|sp|C9Y0V8.1|YMDB_CROTZ RecName: Full=O-acetyl-ADP-ribose deacetylase; AltName:
Full=Regulator of RNase III activity
gi|260216593|emb|CBA29859.1| UPF0189 protein ymdB [Cronobacter turicensis z3032]
Length = 176
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 68/127 (53%), Gaps = 7/127 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ + +GDI+R +D IV+ N L+ GG AIH AAGP L AC + + Q
Sbjct: 5 INVVQGDITRI----DTDVIVNAANPSLMGGGGVDGAIHRAAGPSLLAACKVVRQQQG-- 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C PG A IT L VIHTVGP++ H N +L AY+N L + AN +AF
Sbjct: 59 ECQPGHAVITEAGDLAAKAVIHTVGPIWRGGHDNEPQLLADAYRNSLELVTANGYNSVAF 118
Query: 135 PAISCGV 141
PAIS G+
Sbjct: 119 PAISTGI 125
>gi|148232814|ref|NP_001083167.1| O-acetyl-ADP-ribose deacetylase MACROD2 [Xenopus laevis]
gi|82186807|sp|Q6PAV8.1|MACD2_XENLA RecName: Full=O-acetyl-ADP-ribose deacetylase MACROD2; AltName:
Full=MACRO domain-containing protein 2
gi|37748708|gb|AAH60026.1| Macrod2 protein [Xenopus laevis]
Length = 418
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 70/124 (56%), Gaps = 12/124 (9%)
Query: 20 KGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPP 79
KGDI++ VD AIV+ N LL GG IH A+GP L C ++ C
Sbjct: 74 KGDITQLEVD----AIVNAANTSLLGGGGVDGCIHRASGPSLLAECREL------GGCET 123
Query: 80 GEARITPGFKLPVSHVIHTVGPVFNFHCNP--EDILRSAYKNCLSVGKANNIQYIAFPAI 137
G+A+IT G++LP +VIHTVGP+ H P + L S Y + L++ N+I+ IAFP I
Sbjct: 124 GQAKITCGYELPAKYVIHTVGPIARGHITPNHKQDLASCYNSSLTLATENDIRTIAFPCI 183
Query: 138 SCGV 141
S G+
Sbjct: 184 STGI 187
>gi|302869362|ref|YP_003837999.1| Appr-1-p processing domain-containing protein [Micromonospora
aurantiaca ATCC 27029]
gi|302572221|gb|ADL48423.1| Appr-1-p processing domain protein [Micromonospora aurantiaca ATCC
27029]
Length = 168
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 71/129 (55%), Gaps = 13/129 (10%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ GDI+R VD A+V+ NE LL GG AIH AAGP L +A +
Sbjct: 2 IEVVLGDITREDVD----AVVTAANESLLGGGGVDGAIHRAAGPRLAQAGAAL------A 51
Query: 76 RCPPGEARITPGFKL--PVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
C PG+A TP F L PV HVIHTVGPV+ E D+L S Y+ L V + +
Sbjct: 52 PCDPGDAVATPAFDLDPPVRHVIHTVGPVWEGGGYGEADVLASCYRRSLEVADEIAARRV 111
Query: 133 AFPAISCGV 141
AFPAI+ GV
Sbjct: 112 AFPAIATGV 120
>gi|256822402|ref|YP_003146365.1| Appr-1-p processing protein [Kangiella koreensis DSM 16069]
gi|256795941|gb|ACV26597.1| Appr-1-p processing domain protein [Kangiella koreensis DSM 16069]
Length = 172
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 71/131 (54%), Gaps = 16/131 (12%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L++ GDI++ VD AIV+ + LL GG AIH AAGP+L + C +
Sbjct: 3 LRLDAGDITQLYVD----AIVNAAKKSLLGGGGVDGAIHRAAGPELLEECKTLG------ 52
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPV------FNFHCNPEDILRSAYKNCLSVGKANNI 129
C GEA+IT G+ LP +VIHTVGP+ + N ++L S Y N L + + +
Sbjct: 53 GCETGEAKITKGYDLPAKYVIHTVGPIWSGKEGYGGDNNEAELLASCYINSLQLAEKKEL 112
Query: 130 QYIAFPAISCG 140
+ IAFP IS G
Sbjct: 113 RSIAFPCISTG 123
>gi|374576509|ref|ZP_09649605.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Bradyrhizobium sp. WSM471]
gi|374424830|gb|EHR04363.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Bradyrhizobium sp. WSM471]
Length = 183
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 71/127 (55%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
LK+ DI+ VD AIV+ N LL GG AIH AAGP+L C ++
Sbjct: 13 LKVIVADITTLSVD----AIVNAANTSLLGGGGVDGAIHRAAGPELLAECRKLGG----- 63
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
CP G+A+IT G+ LP HVIH VGPV++ E + L + Y+ L + +AN + +AF
Sbjct: 64 -CPTGDAKITKGYLLPARHVIHAVGPVWHGGTRGEAEALGACYRRALELCEANQLTSVAF 122
Query: 135 PAISCGV 141
AIS GV
Sbjct: 123 SAISTGV 129
>gi|189240853|ref|XP_001812598.1| PREDICTED: similar to LRP16 protein [Tribolium castaneum]
Length = 234
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 72/135 (53%), Gaps = 14/135 (10%)
Query: 7 TLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACY 66
+L+ S + I +GDI+ +D AIV+ N LL GG AIH AAGP+L C
Sbjct: 61 SLNSSLCKKVSIFQGDITTLEID----AIVNAANTSLLGGGGVDGAIHRAAGPNLLAECK 116
Query: 67 QIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKA 126
+ CP G+A IT G+KLP +VIHTVGP +L+ Y+NCL +
Sbjct: 117 TLN------GCPTGDAVITGGYKLPAKYVIHTVGP----RGEKPGLLQQCYRNCLKIMAE 166
Query: 127 NNIQYIAFPAISCGV 141
+Q +AFP IS G+
Sbjct: 167 RKLQTVAFPCISTGI 181
>gi|225711284|gb|ACO11488.1| MACRO domain-containing protein 1 [Caligus rogercresseyi]
Length = 242
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 68/122 (55%), Gaps = 14/122 (11%)
Query: 20 KGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPP 79
+GDI++ VD AIV+ N L GG AIH AAG LQK C I CP
Sbjct: 85 QGDITKLEVD----AIVNAANSGLKAGGGVCGAIHRAAGSQLQKECDSIGG------CPV 134
Query: 80 GEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISC 139
G++RIT G+KLP HVIHTVGP N E L+S Y+ + + A ++ IAFP IS
Sbjct: 135 GDSRITAGYKLPAKHVIHTVGPQDK---NSEH-LKSCYRKSMELLIAKGLRSIAFPCIST 190
Query: 140 GV 141
G+
Sbjct: 191 GI 192
>gi|239814361|ref|YP_002943271.1| Appr-1-p processing domain-containing protein [Variovorax paradoxus
S110]
gi|239800938|gb|ACS18005.1| Appr-1-p processing domain protein [Variovorax paradoxus S110]
Length = 173
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 74/130 (56%), Gaps = 11/130 (8%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
+ +L+ +GDI+ VD AIV+ N LL GG AIH AAGP+L C +
Sbjct: 2 QKALRAIRGDITTLQVD----AIVNAANSSLLGGGGVDGAIHRAAGPELLHECRLLSG-- 55
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
C G+A++T G++LP VIHTVGPV+ + E ++L S Y+ + + + ++
Sbjct: 56 ----CKTGDAKLTRGYRLPARFVIHTVGPVWRGGASGEPELLASCYRKSMEIAGQHGVRT 111
Query: 132 IAFPAISCGV 141
IAFP+IS G+
Sbjct: 112 IAFPSISTGI 121
>gi|407795290|ref|ZP_11142249.1| Appr-1-p processing protein [Salimicrobium sp. MJ3]
gi|407020175|gb|EKE32888.1| Appr-1-p processing protein [Salimicrobium sp. MJ3]
Length = 169
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 72/126 (57%), Gaps = 11/126 (8%)
Query: 16 LKISKGDISRWCVDRSS-DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+++ KGDI+ D+S +A+V+ N+ L GG A A+H+ AGP LQKA + QP
Sbjct: 3 IEVVKGDIA----DQSDMEAVVNAANKELRSGGGVAGALHKKAGPGLQKAGERYAPLQP- 57
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
GEA +T GF LP VIHT+GPV+ E++L S Y L + +NI +AF
Sbjct: 58 -----GEAVVTEGFGLPNDFVIHTLGPVYGTDEPAEELLGSCYGESLERAREHNITSVAF 112
Query: 135 PAISCG 140
P IS G
Sbjct: 113 PLISTG 118
>gi|402848962|ref|ZP_10897208.1| ADP-ribose binding protein [Rhodovulum sp. PH10]
gi|402500838|gb|EJW12504.1| ADP-ribose binding protein [Rhodovulum sp. PH10]
Length = 185
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 72/129 (55%), Gaps = 11/129 (8%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T+L+I DI+ VD AIV+ N LL GG AIH AAGP+L +AC +P
Sbjct: 14 TTLEILVADITTLRVD----AIVNAANRTLLGGGGVDGAIHRAAGPELLEAC------RP 63
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYI 132
C G A+IT GF+LP VIH VGPV+ E+ L S Y+ L++ + N+ I
Sbjct: 64 LGGCDTGSAKITEGFRLPAKFVIHAVGPVWRGGTAGEEAALASCYETSLTLAREKNLVSI 123
Query: 133 AFPAISCGV 141
AF AIS GV
Sbjct: 124 AFSAISTGV 132
>gi|387889743|ref|YP_006320041.1| putative polyprotein [Escherichia blattae DSM 4481]
gi|414592979|ref|ZP_11442627.1| O-acetyl-ADP-ribose deacetylase YmdB [Escherichia blattae NBRC
105725]
gi|386924576|gb|AFJ47530.1| putative polyprotein [Escherichia blattae DSM 4481]
gi|403195812|dbj|GAB80279.1| O-acetyl-ADP-ribose deacetylase YmdB [Escherichia blattae NBRC
105725]
Length = 180
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 68/126 (53%), Gaps = 7/126 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++ GDI+R VD IV+ N LL GG AIH AAGP L C QI + Q
Sbjct: 5 MRACSGDITRIPVD----VIVNAANPSLLGGGGVDGAIHRAAGPALLAECKQIRQQQG-- 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
C PG A IT LP VIHTVGPV++ + E ++L AY + L + AN I+F
Sbjct: 59 ECAPGHAVITGAGDLPARAVIHTVGPVWHGGNHQEAELLEEAYHHSLELASANGYHSISF 118
Query: 135 PAISCG 140
PAIS G
Sbjct: 119 PAISTG 124
>gi|209519807|ref|ZP_03268592.1| Appr-1-p processing domain protein [Burkholderia sp. H160]
gi|209499750|gb|EDZ99820.1| Appr-1-p processing domain protein [Burkholderia sp. H160]
Length = 186
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 64/110 (58%), Gaps = 7/110 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAG +L + C + C G+A+IT G++LP
Sbjct: 26 DAIVNAANTSLLGGGGVDGAIHRAAGKELLRECETLGG------CATGDAKITRGYRLPA 79
Query: 93 SHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
HVIH VGPV+ + E D+L S Y+ L V + + IAFPAISCG+
Sbjct: 80 RHVIHAVGPVWRGGEHGEADLLASCYQRSLEVARDAHCTSIAFPAISCGI 129
>gi|153852710|ref|ZP_01994147.1| hypothetical protein DORLON_00129 [Dorea longicatena DSM 13814]
gi|149754352|gb|EDM64283.1| macro domain protein [Dorea longicatena DSM 13814]
Length = 267
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 76/145 (52%), Gaps = 14/145 (9%)
Query: 3 FKVQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILL-----LGGFTAAAIHEAA 57
F +T+ K SL +GDI+R VD AIV+ N +L G AIH AA
Sbjct: 83 FPCETIKNVDKISL--WRGDITRLSVD----AIVNAANSQMLGCFVPCHGCIDNAIHSAA 136
Query: 58 GPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHC--NPEDILRS 115
G L+ C QI EAQ P G+A+IT G+ LP HVIHTVGP+ E+ L+S
Sbjct: 137 GIQLRNECAQIMEAQGHEE-PTGKAKITKGYNLPAKHVIHTVGPIVGMQVTEKQEEELKS 195
Query: 116 AYKNCLSVGKANNIQYIAFPAISCG 140
Y NC+ + + ++ IAF IS G
Sbjct: 196 CYLNCMKLAEKEGLKSIAFCCISTG 220
>gi|261408059|ref|YP_003244300.1| Appr-1-p processing domain-containing protein [Paenibacillus sp.
Y412MC10]
gi|261284522|gb|ACX66493.1| Appr-1-p processing domain protein [Paenibacillus sp. Y412MC10]
Length = 191
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 75/143 (52%), Gaps = 13/143 (9%)
Query: 2 TFKVQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDL 61
TFK+ +TS+ + GDI+ W + D IV+ N LL G AIH A GP++
Sbjct: 3 TFKI------GRTSVSVFIGDITTW----TGDIIVNAANSGLLGGKGVDGAIHSAGGPEI 52
Query: 62 QKACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNC 120
+ C +I + Q CPPG A IT +LP H+IHTVGP++ E+ L Y+N
Sbjct: 53 MEQCMEIRKQQGG--CPPGNAVITGAGRLPAQHIIHTVGPIWEGGGRREEHTLAECYRNS 110
Query: 121 LSVGKANNIQYIAFPAISCGVSQ 143
L + + IAFP IS G+ +
Sbjct: 111 LLLAIEVGAKSIAFPNISTGIYE 133
>gi|449125035|ref|ZP_21761352.1| hypothetical protein HMPREF9723_01396 [Treponema denticola OTK]
gi|448940718|gb|EMB21623.1| hypothetical protein HMPREF9723_01396 [Treponema denticola OTK]
Length = 176
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 75/132 (56%), Gaps = 11/132 (8%)
Query: 11 STKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPE 70
+T T ++I DI++ VD AIV+ N LL G AIH AAGP+L + C +
Sbjct: 3 NTSTLIEIINADITKLKVD----AIVNAANTTLLGGSGVDGAIHAAAGPELLEECRTLK- 57
Query: 71 AQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNI 129
C GEA+IT +KLP +VIHT GPV+ N E ++L ++Y++CL++
Sbjct: 58 -----GCKTGEAKITEAYKLPSKYVIHTPGPVYENGKNGEAELLANSYRSCLNLAFEYGC 112
Query: 130 QYIAFPAISCGV 141
+ IAFP IS GV
Sbjct: 113 KSIAFPCISTGV 124
>gi|429090979|ref|ZP_19153681.1| Macro domain, possibly ADP-ribose binding module [Cronobacter
dublinensis 1210]
gi|426744634|emb|CCJ79794.1| Macro domain, possibly ADP-ribose binding module [Cronobacter
dublinensis 1210]
Length = 180
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 70/127 (55%), Gaps = 7/127 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ +GDI+R +D IV+ N L+ GG AIH AAGP L AC + + Q
Sbjct: 5 IEVVQGDITRI----DTDVIVNAANPSLMGGGGVDGAIHRAAGPALLAACKVVRQQQG-- 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C PG A IT L V+HTVGPV+ H N +L AY+N L + AN + +AF
Sbjct: 59 ECQPGHAVITEAGNLAAKAVVHTVGPVWRGGHDNEPQLLADAYRNSLELVIANGYRSVAF 118
Query: 135 PAISCGV 141
PAIS G+
Sbjct: 119 PAISTGI 125
>gi|238489639|ref|XP_002376057.1| LRP16 family protein [Aspergillus flavus NRRL3357]
gi|83770768|dbj|BAE60901.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220698445|gb|EED54785.1| LRP16 family protein [Aspergillus flavus NRRL3357]
Length = 212
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 14/132 (10%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
++ + + DI++ + D IV+ N LL GG AIH AAGP+L + C +
Sbjct: 40 TISLIRNDITKL---QGVDCIVNAANRSLLGGGGVDGAIHRAAGPNLLQECRVLDG---- 92
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHC-----NPEDILRSAYKNCLSVGKANNI 129
C G+A+IT ++LP VIHTVGP++ + PE +LRS Y+ L + N++
Sbjct: 93 --CDTGDAKITSAYELPCKRVIHTVGPIYRYELRGGDDRPEALLRSCYRRSLELAVENDM 150
Query: 130 QYIAFPAISCGV 141
+ IAF AIS GV
Sbjct: 151 KSIAFSAISTGV 162
>gi|291534744|emb|CBL07856.1| Predicted phosphatase homologous to the C-terminal domain of
histone macroH2A1 [Roseburia intestinalis M50/1]
Length = 173
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 78/155 (50%), Gaps = 27/155 (17%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+K KGDI++ AIV+ N LL GG AIH AAGP+L C +
Sbjct: 4 IKTIKGDITKVT---DVQAIVNAANNSLLGGGGVDGAIHRAAGPELLAECRTLH------ 54
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPV-FNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C GEA+IT + LP +VIHTVGP+ + E++L S Y N + + N I+ IAF
Sbjct: 55 GCETGEAKITKAYNLPCDYVIHTVGPIWYGGRDKEEELLASCYFNSMKLALENGIRKIAF 114
Query: 135 PAISCGVSQIMTHAIKLQTNCGFLESFWVELSAKV 169
P+IS GV +F VEL+AKV
Sbjct: 115 PSISTGVY-----------------AFPVELAAKV 132
>gi|71023901|ref|XP_762180.1| hypothetical protein UM06033.1 [Ustilago maydis 521]
gi|46101638|gb|EAK86871.1| hypothetical protein UM06033.1 [Ustilago maydis 521]
Length = 220
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 70/128 (54%), Gaps = 12/128 (9%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L I GDI+ +D AIV+ N LL GG AIH AAG +L C ++
Sbjct: 38 LSIFTGDITTLSID----AIVNAANNSLLGGGGVDGAIHRAAGRELVVECGKLNG----- 88
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFN--FHCNPEDILRSAYKNCLSVGKANNIQYIA 133
C G A+ T G+ LP HVIHTVGPV+N H E +LRSAY++ L + + IA
Sbjct: 89 -CETGSAKTTLGYALPSKHVIHTVGPVYNSSRHEECERLLRSAYRSSLEELRKIGAKSIA 147
Query: 134 FPAISCGV 141
FP+IS GV
Sbjct: 148 FPSISTGV 155
>gi|291540563|emb|CBL13674.1| Predicted phosphatase homologous to the C-terminal domain of
histone macroH2A1 [Roseburia intestinalis XB6B4]
Length = 173
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 78/155 (50%), Gaps = 27/155 (17%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+K KGDI++ AIV+ N LL GG AIH AAGP+L C +
Sbjct: 4 IKTIKGDITKVT---DVQAIVNAANNSLLGGGGVDGAIHRAAGPELLAECRTLH------ 54
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPV-FNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C GEA+IT + LP +VIHTVGP+ + E++L S Y N + + N I+ IAF
Sbjct: 55 GCETGEAKITKAYNLPCDYVIHTVGPIWYGGRDKEEELLASCYFNSMKLALENGIRKIAF 114
Query: 135 PAISCGVSQIMTHAIKLQTNCGFLESFWVELSAKV 169
P+IS GV +F VEL+AKV
Sbjct: 115 PSISTGVY-----------------AFPVELAAKV 132
>gi|114565891|ref|YP_753045.1| phosphatase [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
gi|114336826|gb|ABI67674.1| phosphatase [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
Length = 176
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 71/130 (54%), Gaps = 9/130 (6%)
Query: 12 TKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEA 71
+ +++ +GDI+R IV+ N L GG AIH AAGP+L+K E+
Sbjct: 4 SGVEIQVVQGDITR---QEDMAVIVNAANSSLRGGGGVDGAIHRAAGPELKK------ES 54
Query: 72 QPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQY 131
PG+A IT ++LP +VIH VGPV+ H +++L S Y+N L + + +
Sbjct: 55 SALAPIGPGQAVITGAYRLPNRYVIHCVGPVYGVHKPEDELLASCYRNALRLAEKQQLDS 114
Query: 132 IAFPAISCGV 141
IAFPAIS GV
Sbjct: 115 IAFPAISTGV 124
>gi|366089658|ref|ZP_09456024.1| Appr-1-p processing protein [Lactobacillus acidipiscis KCTC 13900]
Length = 167
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 73/129 (56%), Gaps = 11/129 (8%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T + I +GDI+ VD AIV+ N L GG AIH AAG L KAC ++
Sbjct: 2 TKITIFQGDITVQKVD----AIVNAANTSLRGGGGVDGAIHRAAGAKLDKACQRLGG--- 54
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYI 132
C GEA+ T GF LP ++IHT GP++ + N E +L++ Y+NC+ + ++ I
Sbjct: 55 ---CLTGEAKTTAGFNLPAKYIIHTPGPIWRGGNNNEEQLLQNCYQNCVLEAEKHHCHSI 111
Query: 133 AFPAISCGV 141
AFP+IS GV
Sbjct: 112 AFPSISTGV 120
>gi|302790560|ref|XP_002977047.1| hypothetical protein SELMODRAFT_443419 [Selaginella moellendorffii]
gi|300155023|gb|EFJ21656.1| hypothetical protein SELMODRAFT_443419 [Selaginella moellendorffii]
Length = 881
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 88/156 (56%), Gaps = 18/156 (11%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR-VRCPP 79
GD+S+W VD SDA+++P N+ L G A + +AAG L A ++P+ P+ ++
Sbjct: 206 GDLSKWFVDGKSDAVIAPANKRLNTGPAVNAVLFKAAGSRLLDATQRLPDVAPQGIKAEV 265
Query: 80 GEA---RITPGFKLPVSHVIHTVGPVF------NFHCNPEDILRSAYKNCLSVGKANNIQ 130
G+A R++ F LPVS VIHTVGPV+ N + E +++ AYK+ L + + N+
Sbjct: 266 GDAISTRLSTAFNLPVSRVIHTVGPVYKKNDQTNVRESDESLIK-AYKSALDIARKENLV 324
Query: 131 YIAFPAISC---GVSQIMTHAIKLQT---NC-GFLE 159
+AFP +SC G I + L+T NC GF +
Sbjct: 325 NLAFPPLSCRIYGYPYIEGAEVGLRTLKENCEGFTQ 360
>gi|417789447|ref|ZP_12437097.1| RNase III inhibitor [Cronobacter sakazakii E899]
gi|449308697|ref|YP_007441053.1| RNase III inhibitor [Cronobacter sakazakii SP291]
gi|333956531|gb|EGL74184.1| RNase III inhibitor [Cronobacter sakazakii E899]
gi|449098730|gb|AGE86764.1| RNase III inhibitor [Cronobacter sakazakii SP291]
Length = 180
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 68/127 (53%), Gaps = 7/127 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ + +GDI+R VD IV+ N L+ GG AIH AAGP L AC Q+ + Q
Sbjct: 5 INVVQGDITRIDVD----VIVNAANPSLMGGGGVDGAIHRAAGPTLLAACRQVRQQQG-- 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C PG A IT L V+HTVGPV+ N +L AY+N L + AN +AF
Sbjct: 59 ECQPGHAVITEAGDLAAKAVVHTVGPVWRGGQDNEPQLLADAYRNSLQLVAANGYNSVAF 118
Query: 135 PAISCGV 141
PAIS G+
Sbjct: 119 PAISTGI 125
>gi|386334728|ref|YP_006030899.1| hypothetical protein RSPO_c03071 [Ralstonia solanacearum Po82]
gi|334197178|gb|AEG70363.1| conserved hypothetical protein [Ralstonia solanacearum Po82]
Length = 171
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 73/128 (57%), Gaps = 11/128 (8%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+L+ + DI+ DAIV+ N LL GG AIH AAGP+L +AC +
Sbjct: 7 TLRALRADITTL----ECDAIVNAANSSLLGGGGVDGAIHRAAGPELLEACRALHG---- 58
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSA-YKNCLSVGKANNIQYIA 133
C G+A+ITPGF LP +VIHTVGP++ E L +A Y++ L + K + ++ IA
Sbjct: 59 --CRTGQAKITPGFLLPARYVIHTVGPIWRGGRQDEAALLAACYRSSLELAKQHALRTIA 116
Query: 134 FPAISCGV 141
FP IS GV
Sbjct: 117 FPCISTGV 124
>gi|420157875|ref|ZP_14664702.1| macro domain protein [Clostridium sp. MSTE9]
gi|394755524|gb|EJF38735.1| macro domain protein [Clostridium sp. MSTE9]
Length = 171
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 74/125 (59%), Gaps = 11/125 (8%)
Query: 18 ISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRC 77
I +GDI+ + VD AIV+ N LL GG AIH AAGP+L + C ++ C
Sbjct: 5 ILQGDITTFAVD----AIVNAANTSLLGGGGVDGAIHRAAGPELLEECRRLHG------C 54
Query: 78 PPGEARITPGFKLPVSHVIHTVGPVFN-FHCNPEDILRSAYKNCLSVGKANNIQYIAFPA 136
G A+IT G++LP ++VIHT GPV++ E +L S Y+NCL + + N +AFP+
Sbjct: 55 ETGHAKITSGYRLPANYVIHTPGPVWHGGGAGEEGLLASCYQNCLRLAEENGCHTVAFPS 114
Query: 137 ISCGV 141
IS GV
Sbjct: 115 ISTGV 119
>gi|298245979|ref|ZP_06969785.1| Appr-1-p processing domain protein [Ktedonobacter racemifer DSM
44963]
gi|297553460|gb|EFH87325.1| Appr-1-p processing domain protein [Ktedonobacter racemifer DSM
44963]
Length = 156
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 10/126 (7%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
+L + +G+I VD S+D IV+ N L GG AIH AAGP + + C +
Sbjct: 8 NVTLTLMRGNI----VDISADVIVNAANSALAGGGGVDGAIHRAAGPSVMQECRKFE--- 60
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYI 132
RCP G A +T +L ++ H VGP++ H + +L SAY CL + + + +Q I
Sbjct: 61 ---RCPTGSAVVTSAGQLKAIYIFHAVGPIYGHHADAAQLLASAYDTCLDLAEKHRVQSI 117
Query: 133 AFPAIS 138
AFP++S
Sbjct: 118 AFPSLS 123
>gi|184154335|ref|YP_001842676.1| hypothetical protein LAR_1680 [Lactobacillus reuteri JCM 1112]
gi|227364145|ref|ZP_03848242.1| appr-1-p processing domain protein [Lactobacillus reuteri MM2-3]
gi|325683348|ref|ZP_08162864.1| RNase III regulator YmdB [Lactobacillus reuteri MM4-1A]
gi|183225679|dbj|BAG26196.1| conserved hypothetical protein [Lactobacillus reuteri JCM 1112]
gi|227070784|gb|EEI09110.1| appr-1-p processing domain protein [Lactobacillus reuteri MM2-3]
gi|324977698|gb|EGC14649.1| RNase III regulator YmdB [Lactobacillus reuteri MM4-1A]
Length = 170
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 70/123 (56%), Gaps = 11/123 (8%)
Query: 20 KGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPP 79
KGDI++ VD AIV+ N L+ GG AIH AAGP L AC + CP
Sbjct: 11 KGDITKIKVD----AIVNAANTTLMGGGGVDGAIHRAAGPALYGACEKFHG------CPT 60
Query: 80 GEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAFPAIS 138
GEARIT GF LP +IHT GP+++ N ED +L ++Y N L + + + +AF +IS
Sbjct: 61 GEARITGGFNLPAKFIIHTPGPIWHGGDNGEDQLLANSYHNSLLLADKHLCRTVAFTSIS 120
Query: 139 CGV 141
GV
Sbjct: 121 TGV 123
>gi|374376264|ref|ZP_09633922.1| Appr-1-p processing domain protein [Niabella soli DSM 19437]
gi|373233104|gb|EHP52899.1| Appr-1-p processing domain protein [Niabella soli DSM 19437]
Length = 172
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 93/177 (52%), Gaps = 21/177 (11%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++I KGDI++ ++D IV+ N LL GG AIH + GP++ +AC +I Q
Sbjct: 2 IQIIKGDITKV----AADVIVNAANTSLLGGGGVDGAIHRSGGPEILEACRKIVAKQGG- 56
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
C GEA IT KLP +VIHTVGPV+N E + L + Y N L + ++ + +AF
Sbjct: 57 -CKTGEAVITTAGKLPARYVIHTVGPVWNGGLKGEAERLHACYINSLELAAQHHCRSVAF 115
Query: 135 PAISCGV--------SQIMTHAIK--LQTNCGFLESFWVELSAKVTTYDMDLIETAL 181
P IS G+ + I A++ L TN G E +V + T L++TAL
Sbjct: 116 PNISTGIYGYPKKEAATIAVTAVQQFLATNRGIKEVIFVCFDEENET----LVKTAL 168
>gi|225028714|ref|ZP_03717906.1| hypothetical protein EUBHAL_02993 [Eubacterium hallii DSM 3353]
gi|224953960|gb|EEG35169.1| macro domain protein [Eubacterium hallii DSM 3353]
Length = 338
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 70/127 (55%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
LKI + DI++ VD AIV+ N LL GG IH AAGPDL + C +
Sbjct: 3 LKIVRNDITKMNVD----AIVNAANTSLLGGGGVDGCIHRAAGPDLLEECRMLH------ 52
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C G A+IT G++LP +VIHTVGP++ + + +L S Y L++ K + +AF
Sbjct: 53 GCQTGNAKITNGYRLPCKYVIHTVGPIWLDGKHQEQKLLESCYDTSLNLAKEYGCESVAF 112
Query: 135 PAISCGV 141
P IS G+
Sbjct: 113 PLISSGI 119
>gi|163754441|ref|ZP_02161563.1| hypothetical protein KAOT1_16138 [Kordia algicida OT-1]
gi|161325382|gb|EDP96709.1| hypothetical protein KAOT1_16138 [Kordia algicida OT-1]
Length = 173
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+K+ + DI+ VD AIV+ N LL GG AIH G ++ +AC +I Q +
Sbjct: 2 KIKLLQADITTLNVD----AIVNAANSSLLGGGGVDGAIHRKGGSEILEACKKIRTRQGK 57
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHC-NPEDILRSAYKNCLSVGKANNIQYIA 133
C GEA IT KLP VIHTVGPV+N N +++L + YKN L + +NI+ I
Sbjct: 58 --CNTGEAVITTAGKLPSKFVIHTVGPVWNNGGKNKKELLANCYKNSLDLAIEHNIKTIV 115
Query: 134 FPAISCGVSQ 143
FP IS G+ +
Sbjct: 116 FPNISTGIYK 125
>gi|148545001|ref|YP_001272371.1| appr-1-p processing domain-containing protein [Lactobacillus
reuteri DSM 20016]
gi|148532035|gb|ABQ84034.1| Appr-1-p processing domain protein [Lactobacillus reuteri DSM
20016]
Length = 167
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 70/123 (56%), Gaps = 11/123 (8%)
Query: 20 KGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPP 79
KGDI++ VD AIV+ N L+ GG AIH AAGP L AC + CP
Sbjct: 8 KGDITKIKVD----AIVNAANTTLMGGGGVDGAIHRAAGPALYGACEKFHG------CPT 57
Query: 80 GEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAFPAIS 138
GEARIT GF LP +IHT GP+++ N ED +L ++Y N L + + + +AF +IS
Sbjct: 58 GEARITGGFNLPAKFIIHTPGPIWHGGDNGEDQLLANSYHNSLLLADKHLCRTVAFTSIS 117
Query: 139 CGV 141
GV
Sbjct: 118 TGV 120
>gi|239991851|ref|ZP_04712515.1| hypothetical protein SrosN1_31417 [Streptomyces roseosporus NRRL
11379]
gi|291448851|ref|ZP_06588241.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
gi|411002269|ref|ZP_11378598.1| RNase III inhibitor [Streptomyces globisporus C-1027]
gi|291351798|gb|EFE78702.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
Length = 177
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 72/134 (53%), Gaps = 4/134 (2%)
Query: 8 LSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQ 67
+S S ++++ +GDI+ D+S D IV+ N LL GG AIH GPD+ AC +
Sbjct: 1 MSTSVSPAVRLVRGDIT----DQSVDVIVNAANSSLLGGGGVDGAIHRRGGPDILAACRE 56
Query: 68 IPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKAN 127
+ +Q P G+A T +L ++HTVGPVF+ + +L S Y+ L +
Sbjct: 57 LRASQYGKGLPTGQAVATTAGRLDAQWIVHTVGPVFSGAQDRSALLASCYRESLRLAAEL 116
Query: 128 NIQYIAFPAISCGV 141
+ IAFPAIS G+
Sbjct: 117 GAKSIAFPAISTGI 130
>gi|329925955|ref|ZP_08280648.1| macro domain protein [Paenibacillus sp. HGF5]
gi|328939523|gb|EGG35873.1| macro domain protein [Paenibacillus sp. HGF5]
Length = 174
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 75/143 (52%), Gaps = 13/143 (9%)
Query: 2 TFKVQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDL 61
TFK+ +TS+ + GDI+ W + D IV+ N LL G AIH A GP++
Sbjct: 3 TFKI------GRTSVSVFIGDITTW----TGDIIVNAANSGLLGGKGVDGAIHSAGGPEI 52
Query: 62 QKACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNC 120
+ C +I + Q CPPG A IT +LP H+IHTVGP++ E+ L Y+N
Sbjct: 53 MEQCMEIRKQQGG--CPPGNAVITGAGRLPAQHIIHTVGPIWEGGGRREEHTLAECYRNS 110
Query: 121 LSVGKANNIQYIAFPAISCGVSQ 143
L + + IAFP IS G+ +
Sbjct: 111 LLLAIEVGAKSIAFPNISTGIYE 133
>gi|209965248|ref|YP_002298163.1| hypothetical protein RC1_1954 [Rhodospirillum centenum SW]
gi|209958714|gb|ACI99350.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 204
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 74/130 (56%), Gaps = 12/130 (9%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAG-PDLQKACYQIPEAQ 72
T L++ +GDI+ +D AIV+ N+ L GG AIH AAG ++Q A +
Sbjct: 32 TRLEVVEGDITTLALD----AIVNAANDRLAGGGGVDGAIHRAAGWAEMQAAL------R 81
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
P CP G A ITPGF+LP VIHTVGPV+ E D+L + Y+ L + + ++
Sbjct: 82 PFGGCPTGGAVITPGFRLPARFVIHTVGPVWRGGGAGEPDLLAACYRRSLELAAEHTLRS 141
Query: 132 IAFPAISCGV 141
IAFPAIS GV
Sbjct: 142 IAFPAISTGV 151
>gi|148256687|ref|YP_001241272.1| hypothetical protein BBta_5392 [Bradyrhizobium sp. BTAi1]
gi|146408860|gb|ABQ37366.1| hypothetical protein BBta_5392 [Bradyrhizobium sp. BTAi1]
Length = 186
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 77/142 (54%), Gaps = 14/142 (9%)
Query: 1 MTFKVQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPD 60
M++ V+ + T ++ DI++ VD AIV+ N LL GG AIH AAGP+
Sbjct: 1 MSYPVRKIG---ATRFEVITADITKLGVD----AIVNAANSSLLGGGGVDGAIHRAAGPE 53
Query: 61 LQKACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKN 119
L C + C GEA+IT G++LP HVIHTVGPV+ E ++L S Y+
Sbjct: 54 LVMECRMLHG------CRTGEAKITRGYRLPARHVIHTVGPVWQGGERGEPELLASCYRR 107
Query: 120 CLSVGKANNIQYIAFPAISCGV 141
+ + + + +AFPAIS G+
Sbjct: 108 SIELCHKHLLDSVAFPAISTGI 129
>gi|196006888|ref|XP_002113310.1| hypothetical protein TRIADDRAFT_27195 [Trichoplax adhaerens]
gi|190583714|gb|EDV23784.1| hypothetical protein TRIADDRAFT_27195, partial [Trichoplax
adhaerens]
Length = 179
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 68/122 (55%), Gaps = 14/122 (11%)
Query: 20 KGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPP 79
+GDI+ +D AIV+ N LL GG AIH AAG +L CY++ C P
Sbjct: 6 RGDITTLEID----AIVNAANSSLLGGGGVDGAIHRAAGRELADECYRLNG------CEP 55
Query: 80 GEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISC 139
G A+IT G++LP HVIHTVGP+ P+ L S Y CL + K + I+ +AF IS
Sbjct: 56 GNAKITKGYRLPAKHVIHTVGPIGQ---EPK-TLTSCYNRCLELAKVHQIRSVAFCCIST 111
Query: 140 GV 141
G+
Sbjct: 112 GI 113
>gi|241998364|ref|XP_002433825.1| MACRO domain-containing protein, putative [Ixodes scapularis]
gi|215495584|gb|EEC05225.1| MACRO domain-containing protein, putative [Ixodes scapularis]
Length = 304
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAGP L++ C + CP GEA+IT G+KLP
Sbjct: 151 DAIVNAANNRLLGGGGVDGAIHSAAGPKLKEECATLNG------CPTGEAKITGGYKLPA 204
Query: 93 SHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
+VIHTVGPV E L Y L KA+ I+ +AFP IS G+
Sbjct: 205 KYVIHTVGPV----GENEAKLHGCYVTSLETAKAHKIRTLAFPCISTGI 249
>gi|350571618|ref|ZP_08939937.1| RNase III regulator YmdB [Neisseria wadsworthii 9715]
gi|349791472|gb|EGZ45355.1| RNase III regulator YmdB [Neisseria wadsworthii 9715]
Length = 171
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 72/130 (55%), Gaps = 11/130 (8%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K +++ + DI+ VD AIV+ N LL GG AIH AAG +L C +
Sbjct: 2 KAIIEVIEADITTLRVD----AIVNAANPTLLGGGGVDGAIHRAAGAELLAECRTLN--- 54
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHC-NPEDILRSAYKNCLSVGKANNIQY 131
C GEA+IT G+ LP VIHTVGPV+N E++L +AY N L + + ++
Sbjct: 55 ---GCKTGEAKITAGYLLPTRSVIHTVGPVWNGGGQGEEELLANAYANSLKLAEEEGMRS 111
Query: 132 IAFPAISCGV 141
IAFP+IS GV
Sbjct: 112 IAFPSISTGV 121
>gi|291533864|emb|CBL06977.1| Predicted phosphatase homologous to the C-terminal domain of
histone macroH2A1 [Megamonas hypermegale ART12/1]
Length = 166
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 62/109 (56%), Gaps = 6/109 (5%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N+ LL GG AIH AG +L + E + C GEA+IT G+ L
Sbjct: 15 DAIVNAANKTLLGGGGVDGAIHRRAGREL------LAECRTLGGCETGEAKITKGYNLKA 68
Query: 93 SHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
+VIHTVGP+ + N +L + YKN L + ++I IAFPAIS GV
Sbjct: 69 KYVIHTVGPICSTQKNQASLLANCYKNSLDLALKHDIHSIAFPAISTGV 117
>gi|115373782|ref|ZP_01461075.1| appr-1-p processing [Stigmatella aurantiaca DW4/3-1]
gi|115369181|gb|EAU68123.1| appr-1-p processing [Stigmatella aurantiaca DW4/3-1]
Length = 177
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 67/112 (59%), Gaps = 7/112 (6%)
Query: 31 SSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKL 90
++DAIV+ NE LL GG AIH AAG +L + C + CP GEARIT G++L
Sbjct: 14 AADAIVNAANESLLGGGGVDGAIHRAAGAELLEECRTLGG------CPTGEARITRGYRL 67
Query: 91 PVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
P HVIHTVGP ++ E +L Y++ + + + ++ +AFP+IS GV
Sbjct: 68 PARHVIHTVGPRWHGGGQGEAALLARCYQSVFARMEEHGLRTVAFPSISTGV 119
>gi|115391435|ref|XP_001213222.1| protein LRP16 [Aspergillus terreus NIH2624]
gi|114194146|gb|EAU35846.1| protein LRP16 [Aspergillus terreus NIH2624]
Length = 344
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 69/141 (48%), Gaps = 14/141 (9%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
D IV+ N LL GG AIH AAGP L + C + C G+A+ T + LP
Sbjct: 55 DCIVNAANSSLLGGGGVDGAIHRAAGPGLVRECRTL------GGCATGDAKTTAAYDLPC 108
Query: 93 SHVIHTVGPVFNFH-----CNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGV---SQI 144
VIHTVGP++ PE +LRS Y+ CL + N + IAFPAIS GV +
Sbjct: 109 RWVIHTVGPIYPVERQKGAARPEQLLRSCYRRCLELAVRNKARSIAFPAISTGVYAYPKR 168
Query: 145 MTHAIKLQTNCGFLESFWVEL 165
I L FLES ++
Sbjct: 169 RAARIALDETRAFLESEGTDI 189
>gi|400290824|ref|ZP_10792851.1| RNA-directed RNA polymerase [Streptococcus ratti FA-1 = DSM 20564]
gi|399921615|gb|EJN94432.1| RNA-directed RNA polymerase [Streptococcus ratti FA-1 = DSM 20564]
Length = 171
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 73/127 (57%), Gaps = 10/127 (7%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L++ +GDI++ + DAIV+ N+ LL GG AIH AAG +L + C Q+
Sbjct: 2 LELIQGDITKV---KDVDAIVNAANQTLLGGGGVDGAIHRAAGKELLEECRQLRG----- 53
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHC-NPEDILRSAYKNCLSVGKANNIQYIAF 134
C G+A++T + LP ++IHTVGPV+ N ++L S Y+ L + I+ IAF
Sbjct: 54 -CKTGQAKLTKAYNLPCRYIIHTVGPVWQGGGKNEAELLASCYRESLKLAAQYGIRRIAF 112
Query: 135 PAISCGV 141
P+IS GV
Sbjct: 113 PSISTGV 119
>gi|389841441|ref|YP_006343525.1| RNase III inhibitor [Cronobacter sakazakii ES15]
gi|387851917|gb|AFK00015.1| RNase III inhibitor [Cronobacter sakazakii ES15]
Length = 180
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 68/127 (53%), Gaps = 7/127 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ + +GDI+R +D IV+ N L+ GG AIH AAGP L AC Q+ + Q
Sbjct: 5 INVVQGDITRI----DADVIVNAANPSLMGGGGVDGAIHRAAGPALLAACRQVRQQQG-- 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C PG A IT L V+HTVGPV+ N +L AY+N L + AN +AF
Sbjct: 59 ECQPGHAVITEAGDLAAKAVVHTVGPVWRGGQDNEPQLLADAYRNSLQLVAANGYNSVAF 118
Query: 135 PAISCGV 141
PAIS G+
Sbjct: 119 PAISTGI 125
>gi|375084549|ref|ZP_09731413.1| hypothetical protein HMPREF9454_00024 [Megamonas funiformis YIT
11815]
gi|374568034|gb|EHR39228.1| hypothetical protein HMPREF9454_00024 [Megamonas funiformis YIT
11815]
Length = 166
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 67/126 (53%), Gaps = 10/126 (7%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ I GDI+ DAIV+ N+ LL GG AIH AG +L C +
Sbjct: 2 ISIDLGDITIL----DCDAIVNAANKTLLGGGGVDGAIHRRAGRELLAECRTLG------ 51
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFP 135
C GEA+IT G+ L +VIHTVGP+ + N +L + YKN L + ++I IAFP
Sbjct: 52 GCETGEAKITKGYNLKAKYVIHTVGPICSTQKNQASLLANCYKNSLDLALKHDIHSIAFP 111
Query: 136 AISCGV 141
AIS GV
Sbjct: 112 AISTGV 117
>gi|449106196|ref|ZP_21742870.1| hypothetical protein HMPREF9729_01135 [Treponema denticola ASLM]
gi|451967915|ref|ZP_21921144.1| hypothetical protein HMPREF9728_00315 [Treponema denticola US-Trep]
gi|448965495|gb|EMB46157.1| hypothetical protein HMPREF9729_01135 [Treponema denticola ASLM]
gi|451703293|gb|EMD57668.1| hypothetical protein HMPREF9728_00315 [Treponema denticola US-Trep]
Length = 176
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 75/132 (56%), Gaps = 11/132 (8%)
Query: 11 STKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPE 70
+T T ++I DI++ VD AIV+ N LL G AIH AAGP+L + C +
Sbjct: 3 NTSTLIEIINADITKLKVD----AIVNAANTTLLGGSGVDGAIHAAAGPELLEECRTLK- 57
Query: 71 AQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNI 129
C GEA+IT +KLP +VIHT GPV+ N E ++L ++Y++CL++
Sbjct: 58 -----GCKTGEAKITGAYKLPSKYVIHTPGPVYKNGKNGEAELLANSYRSCLNLAFEYGC 112
Query: 130 QYIAFPAISCGV 141
+ IAFP IS GV
Sbjct: 113 KSIAFPCISTGV 124
>gi|312143517|ref|YP_003994963.1| Appr-1-p processing protein [Halanaerobium hydrogeniformans]
gi|311904168|gb|ADQ14609.1| Appr-1-p processing domain protein [Halanaerobium hydrogeniformans]
Length = 181
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N L +GG A IH AAGP+L+K + PGEA IT G++L
Sbjct: 25 DAIVNAANAELRMGGGVAGVIHRAAGPELEKKSSSL------APLKPGEAVITDGYQLEN 78
Query: 93 SHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCG 140
VIHT+GPV+ E +L Y+N L + + NI+ I FPAIS G
Sbjct: 79 DFVIHTLGPVYGVDKPEERLLAKCYQNSLKIAEKTNIESIGFPAISTG 126
>gi|390600616|gb|EIN10011.1| A1pp-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 217
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 78/143 (54%), Gaps = 17/143 (11%)
Query: 20 KGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPP 79
+GDI+ D D+IV+ N+ LL GG AIH AAG +L C + C
Sbjct: 42 QGDIT----DLEVDSIVNAANKSLLGGGGVDGAIHAAAGRELLAECRTLNG------CET 91
Query: 80 GEARITPGFKLPVSHVIHTVGPVFNFHCNPE---DILRSAYKNCLSVGKANNIQYIAFPA 136
G+A+IT G+KLP HVIHTVGPV++ N E L S Y+ L + N++++IAFP+
Sbjct: 92 GDAKITKGYKLPSKHVIHTVGPVYS-SSNVETKASQLASCYRRSLELATENSLRHIAFPS 150
Query: 137 ISCGVSQIMTHAIKLQTNCGFLE 159
IS G I + IK T+ E
Sbjct: 151 ISTG---IYGYPIKDATHIALTE 170
>gi|449108013|ref|ZP_21744657.1| hypothetical protein HMPREF9722_00353 [Treponema denticola ATCC
33520]
gi|449118701|ref|ZP_21755102.1| hypothetical protein HMPREF9725_00567 [Treponema denticola H1-T]
gi|449121090|ref|ZP_21757442.1| hypothetical protein HMPREF9727_00202 [Treponema denticola MYR-T]
gi|448951316|gb|EMB32129.1| hypothetical protein HMPREF9727_00202 [Treponema denticola MYR-T]
gi|448951729|gb|EMB32538.1| hypothetical protein HMPREF9725_00567 [Treponema denticola H1-T]
gi|448961863|gb|EMB42557.1| hypothetical protein HMPREF9722_00353 [Treponema denticola ATCC
33520]
Length = 176
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 75/132 (56%), Gaps = 11/132 (8%)
Query: 11 STKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPE 70
+T T ++I DI++ VD AIV+ N LL G AIH AAGP+L + C +
Sbjct: 3 NTSTLIEIINADITKLKVD----AIVNAANTTLLGGSGVDGAIHAAAGPELLEECRTLK- 57
Query: 71 AQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNI 129
C GEA+IT +KLP +VIHT GPV+ N E ++L ++Y++CL++
Sbjct: 58 -----GCKTGEAKITGAYKLPSKYVIHTPGPVYENGKNGEAELLANSYRSCLNLAFEYGC 112
Query: 130 QYIAFPAISCGV 141
+ IAFP IS GV
Sbjct: 113 KSIAFPCISTGV 124
>gi|94310782|ref|YP_583992.1| hypothetical protein Rmet_1844 [Cupriavidus metallidurans CH34]
gi|430809373|ref|ZP_19436488.1| hypothetical protein D769_23943 [Cupriavidus sp. HMR-1]
gi|93354634|gb|ABF08723.1| conserved hypothetical protein [Cupriavidus metallidurans CH34]
gi|222874612|gb|EEF11743.1| predicted protein [Populus trichocarpa]
gi|429498182|gb|EKZ96696.1| hypothetical protein D769_23943 [Cupriavidus sp. HMR-1]
Length = 173
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 75/131 (57%), Gaps = 7/131 (5%)
Query: 12 TKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEA 71
T L++ GDI+R VD AIV+ N LL GG AIH A GP + AC I +A
Sbjct: 2 TGEHLQVVHGDITRMEVD----AIVNAANSGLLGGGGVDGAIHGAGGPAIMDACRAIRDA 57
Query: 72 QPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDI-LRSAYKNCLSVGKANNIQ 130
Q CP GEA IT G LP +VIH VGPV++ E+ L SAY+N + + +N++
Sbjct: 58 QGG--CPTGEAVITTGGLLPAPYVIHAVGPVWHGGSKEEETQLASAYRNSIRLAGEHNLR 115
Query: 131 YIAFPAISCGV 141
+AFP IS G+
Sbjct: 116 TVAFPNISTGI 126
>gi|78043303|ref|YP_359450.1| hypothetical protein CHY_0594 [Carboxydothermus hydrogenoformans
Z-2901]
gi|77995418|gb|ABB14317.1| conserved hypothetical protein [Carboxydothermus hydrogenoformans
Z-2901]
Length = 181
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 73/131 (55%), Gaps = 9/131 (6%)
Query: 11 STKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPE 70
++K LK+ GDI++ VD AIV+ N L GG AIH A GP + + C +I
Sbjct: 7 NSKIILKL--GDITKEKVD----AIVNAANSRLAGGGGVDGAIHRAGGPKIMEECREIIN 60
Query: 71 AQPRVRCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNI 129
+ PPGEA T LP +VIHTVGP++ E+ LR+AY N L + K N+
Sbjct: 61 KIGVL--PPGEAVATTAGNLPAKYVIHTVGPIYRGGQKGEENTLRNAYLNSLKLAKQLNV 118
Query: 130 QYIAFPAISCG 140
+ IAFP+IS G
Sbjct: 119 KTIAFPSISTG 129
>gi|313677201|ref|YP_004055197.1| appr-1-p processing domain protein [Marivirga tractuosa DSM 4126]
gi|312943899|gb|ADR23089.1| Appr-1-p processing domain protein [Marivirga tractuosa DSM 4126]
Length = 174
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 71/121 (58%), Gaps = 9/121 (7%)
Query: 20 KGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPP 79
KGDI++ +AIV+ N L +GG A AIH AAG +L + + A RV
Sbjct: 12 KGDITKQ---DDIEAIVNAANAQLQMGGGVAGAIHAAAGKELAEETKSL--APVRV---- 62
Query: 80 GEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISC 139
GEA ++ G LP ++IHT+GPV+ F+ E+ L + YKN L V + NI+ IAFPAIS
Sbjct: 63 GEAVVSGGHNLPNKYIIHTLGPVYGFNQPEEEFLANCYKNSLLVAEETNIKSIAFPAIST 122
Query: 140 G 140
G
Sbjct: 123 G 123
>gi|320167631|gb|EFW44530.1| macrod1 protein [Capsaspora owczarzaki ATCC 30864]
Length = 291
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 77/134 (57%), Gaps = 14/134 (10%)
Query: 8 LSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQ 67
L + K SL +GDI+ +D AIV+ NE LL GG +IH AAG DL+K C
Sbjct: 139 LDLAAKISLW--RGDITTLEID----AIVNAANESLLGGGGVDGSIHRAAGSDLRKYC-- 190
Query: 68 IPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKAN 127
E + R C G+A ITPGF+LP S+VIHTVGP+ P+ +L+S Y+ L
Sbjct: 191 --ETRFRNGCRTGQAEITPGFRLPASYVIHTVGPIGE---KPQ-LLQSCYEKSLDQAMNA 244
Query: 128 NIQYIAFPAISCGV 141
N++ +AF IS GV
Sbjct: 245 NLRTVAFCCISTGV 258
>gi|385207090|ref|ZP_10033958.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Burkholderia sp. Ch1-1]
gi|385179428|gb|EIF28704.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Burkholderia sp. Ch1-1]
Length = 182
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 71/131 (54%), Gaps = 11/131 (8%)
Query: 12 TKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEA 71
+ +L+ DI++ VD AIV+ N LL GG AIH AAG +L C +
Sbjct: 5 NRCTLEARVVDITKLAVD----AIVNAANTSLLGGGGVDGAIHRAAGKELTHECEALGG- 59
Query: 72 QPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQ 130
C G+A++T G++LP HVIH VGP + + E D+L S Y+ L V + +
Sbjct: 60 -----CATGDAKLTGGYRLPARHVIHAVGPRWRGGAHGEADLLASCYQRSLEVAREAQCR 114
Query: 131 YIAFPAISCGV 141
IAFPAISCG+
Sbjct: 115 SIAFPAISCGI 125
>gi|13476415|ref|NP_107985.1| hypothetical protein mll7730 [Mesorhizobium loti MAFF303099]
gi|20178157|sp|Q985D2.1|Y7730_RHILO RecName: Full=Macro domain-containing protein mll7730
gi|14027176|dbj|BAB54130.1| mll7730 [Mesorhizobium loti MAFF303099]
Length = 176
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 76/127 (59%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++I GDI++ VD AIV+ N +LL GG AIH AAG +L+ C +
Sbjct: 8 IRIHTGDITKLDVD----AIVNAANTLLLGGGGVDGAIHRAAGRELEVECRMLNG----- 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
C G+A+IT G+KLP H+IHTVGPV+ E ++L S Y++ L + AN+ + +AF
Sbjct: 59 -CKVGDAKITKGYKLPARHIIHTVGPVWQGGGKGEAELLASCYRSSLELAAANDCRSVAF 117
Query: 135 PAISCGV 141
PAIS GV
Sbjct: 118 PAISTGV 124
>gi|334312747|ref|XP_001382115.2| PREDICTED: MACRO domain-containing protein 2-like [Monodelphis
domestica]
Length = 389
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 74/135 (54%), Gaps = 14/135 (10%)
Query: 9 SFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQI 68
S S K SL +GDI+ +D AIV+ N LL GG IH AAGP L C +
Sbjct: 67 SLSEKVSL--YRGDITLLEID----AIVNAANASLLGGGGVDGCIHRAAGPCLVAECRNL 120
Query: 69 PEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNP--EDILRSAYKNCLSVGKA 126
C G+A+IT G+ LP +VIHTVGP+ H + ++ L + YK+ L + K
Sbjct: 121 ------SGCETGQAKITCGYDLPAKYVIHTVGPIARGHISDSHKEDLANCYKSSLKLAKE 174
Query: 127 NNIQYIAFPAISCGV 141
NNI+ IAFP IS G+
Sbjct: 175 NNIRSIAFPCISTGI 189
>gi|339442913|ref|YP_004708918.1| hypothetical protein CXIVA_18490 [Clostridium sp. SY8519]
gi|338902314|dbj|BAK47816.1| uncharacterized BCR [Clostridium sp. SY8519]
Length = 185
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 77/130 (59%), Gaps = 10/130 (7%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
T ++ +GDI++ VD S AIV+ N+ LL GG AIH AAG +L C +
Sbjct: 5 NTVIRTIQGDITK--VD-SVVAIVNAANKSLLGGGGVDGAIHRAAGKELLAECRTLN--- 58
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
C GEA+IT + LP ++IHTVGPV++ + E ++L + YKN L + K + I+
Sbjct: 59 ---GCETGEAKITGAYNLPCKYIIHTVGPVWHGGGHREAELLANCYKNSLQLAKDHGIRS 115
Query: 132 IAFPAISCGV 141
IAFP+IS GV
Sbjct: 116 IAFPSISTGV 125
>gi|83589008|ref|YP_429017.1| Appr-1-p processing [Moorella thermoacetica ATCC 39073]
gi|83571922|gb|ABC18474.1| Appr-1-p processing [Moorella thermoacetica ATCC 39073]
Length = 186
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 73/128 (57%), Gaps = 7/128 (5%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T L++ +GDI VD+ +A+V+ N L G AIH A GP + + C +I E Q
Sbjct: 8 TLLQLLQGDI----VDQEVEAVVNAANTGLWGGSGVDGAIHRAGGPAIAEECRRIREEQG 63
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYI 132
CP G+A IT G L +VIHTVGP++ ED +L SAY++ L + + I+ +
Sbjct: 64 G--CPVGQAVITSGGFLKARYVIHTVGPIWRGGREGEDELLASAYRSSLQLAREKGIKSL 121
Query: 133 AFPAISCG 140
AFP+IS G
Sbjct: 122 AFPSISTG 129
>gi|320106002|ref|YP_004181592.1| Appr-1-p processing protein [Terriglobus saanensis SP1PR4]
gi|319924523|gb|ADV81598.1| Appr-1-p processing domain protein [Terriglobus saanensis SP1PR4]
Length = 170
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 62/110 (56%), Gaps = 7/110 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAGP L +AC ++ CP G+ + TPGF+LP
Sbjct: 16 DAIVNAANTSLLGGGGVDGAIHRAAGPKLLEACRKLHG------CPTGQVKATPGFRLPA 69
Query: 93 SHVIHTVGPVFNFHCNPEDI-LRSAYKNCLSVGKANNIQYIAFPAISCGV 141
V H VGPV++ ED+ L S Y+ L + + IAFPAIS GV
Sbjct: 70 KFVFHAVGPVWSDGTQDEDVLLASCYRRSLKLAFEHECASIAFPAISTGV 119
>gi|317137470|ref|XP_001727740.2| protein LRP16 [Aspergillus oryzae RIB40]
gi|391870176|gb|EIT79362.1| hismacro and SEC14 domain-containing protein [Aspergillus oryzae
3.042]
Length = 347
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 64/114 (56%), Gaps = 11/114 (9%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
D IV+ N LL GG AIH AAGP+L + C + C G+A+IT ++LP
Sbjct: 55 DCIVNAANRSLLGGGGVDGAIHRAAGPNLLQECRVLD------GCDTGDAKITSAYELPC 108
Query: 93 SHVIHTVGPVFNFHC-----NPEDILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
VIHTVGP++ + PE +LRS Y+ L + N+++ IAF AIS GV
Sbjct: 109 KRVIHTVGPIYRYELRGGDDRPEALLRSCYRRSLELAVENDMKSIAFSAISTGV 162
>gi|110638758|ref|YP_678967.1| Appr-1-p processing enzyme family protein [Cytophaga hutchinsonii
ATCC 33406]
gi|110281439|gb|ABG59625.1| Appr-1-p processing enzyme family protein [Cytophaga hutchinsonii
ATCC 33406]
Length = 177
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 76/147 (51%), Gaps = 10/147 (6%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ KGDI+ VD AIV+ N LL GG AIH A G ++ + C +I Q
Sbjct: 2 IEVIKGDITTVEVD----AIVNAANTSLLGGGGVDGAIHRAGGKEILEDCRKIIARQGS- 56
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFN-FHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C GEA IT KLP VIHTVGPV+N + N D L Y N L + N+ IAF
Sbjct: 57 -CKTGEAVITTAGKLPAKFVIHTVGPVWNGGNKNESDKLADCYFNALKLAVENDCVSIAF 115
Query: 135 PAISCGVSQI---MTHAIKLQTNCGFL 158
P IS G+ + M I ++T FL
Sbjct: 116 PGISTGIYRFPKTMAAHIAVKTTVDFL 142
>gi|403283677|ref|XP_003933237.1| PREDICTED: O-acetyl-ADP-ribose deacetylase MACROD2 isoform 1
[Saimiri boliviensis boliviensis]
Length = 447
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 2 TFKVQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDL 61
T ++ + S + + +GDI+ VD AIV+ N LL GG IH AAGP L
Sbjct: 58 TQEISQMKKSLAEKVSLYRGDITLLEVD----AIVNAANASLLGGGGVDGCIHRAAGPCL 113
Query: 62 QKACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNP--EDILRSAYKN 119
C + C G A+IT G+ LP +VIHTVGP+ H N ++ L + YK+
Sbjct: 114 LAECRNLN------GCDTGHAKITCGYDLPAKYVIHTVGPIARGHINGSHKEDLANCYKS 167
Query: 120 CLSVGKANNIQYIAFPAISCGV 141
L + K NNI+ +AFP IS G+
Sbjct: 168 SLKLVKENNIRSVAFPCISTGI 189
>gi|434407900|ref|YP_007150785.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Cylindrospermum stagnale PCC 7417]
gi|428262155|gb|AFZ28105.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Cylindrospermum stagnale PCC 7417]
Length = 244
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 73/129 (56%), Gaps = 11/129 (8%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
+ ++I +GDI++ + DAIV+ NE L+ GG + AIH G L++ C ++
Sbjct: 73 RERMEIIEGDITQ----QKVDAIVNAANEALIAGGGVSGAIHRNTGLGLEEECLKLE--- 125
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
C G+A+IT G+ LP VIHTVGPV+ E IL Y+NC + + NI+
Sbjct: 126 ---GCEEGQAKITKGYCLPAKWVIHTVGPVWEGGTYEEHKILAQCYRNCFAFVEPYNIKT 182
Query: 132 IAFPAISCG 140
IAFP+IS G
Sbjct: 183 IAFPSISTG 191
>gi|294506448|ref|YP_003570506.1| Appr-1-p processing enzyme family protein [Salinibacter ruber M8]
gi|294342776|emb|CBH23554.1| Appr-1-p processing enzyme family protein [Salinibacter ruber M8]
Length = 181
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 69/126 (54%), Gaps = 9/126 (7%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+++++ GDI++ +A+V+ N L GG A A+H AAGP L E +P
Sbjct: 9 TIELTTGDIAKQS---DVEAVVNAANAQLRTGGGVAGALHSAAGPGLAT------ETRPM 59
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
PGEA I+ LP HVIH +GPV+ +++LR+ Y+N L + N I +AF
Sbjct: 60 APIEPGEAVISGAHDLPNDHVIHVLGPVYGRDEPSDELLRTGYENALRQAEENGISSVAF 119
Query: 135 PAISCG 140
PA+S G
Sbjct: 120 PALSTG 125
>gi|410954381|ref|XP_003983843.1| PREDICTED: LOW QUALITY PROTEIN: O-acetyl-ADP-ribose deacetylase
MACROD2 [Felis catus]
Length = 505
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 73/136 (53%), Gaps = 16/136 (11%)
Query: 9 SFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQI 68
S S K SL +GDI+ VD AIV+ N LL GG IH AAGP L C +
Sbjct: 67 SLSEKVSL--YRGDITLLEVD----AIVNAANASLLGGGGVDGCIHRAAGPCLLAECRNL 120
Query: 69 PEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCN---PEDILRSAYKNCLSVGK 125
C G A+IT G+ LP +VIHTVGP+ H N ED L + YK+ L + K
Sbjct: 121 N------GCETGHAKITCGYDLPAKYVIHTVGPIARGHINGSHKED-LANCYKSSLKLVK 173
Query: 126 ANNIQYIAFPAISCGV 141
NNI+ +AFP IS G+
Sbjct: 174 ENNIRSVAFPCISTGI 189
>gi|373118624|ref|ZP_09532749.1| hypothetical protein HMPREF0995_03585 [Lachnospiraceae bacterium
7_1_58FAA]
gi|371666723|gb|EHO31862.1| hypothetical protein HMPREF0995_03585 [Lachnospiraceae bacterium
7_1_58FAA]
Length = 169
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 72/122 (59%), Gaps = 11/122 (9%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPG 80
GDI+R +DAIV+ N LL GG AIH AAGP+L C + C G
Sbjct: 9 GDITRI----EADAIVNAANRTLLGGGGVDGAIHRAAGPELLAECRTLH------GCETG 58
Query: 81 EARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISC 139
+A+IT G+KLP +VIHT GP++ + E ++L S Y++ L++ ++ + +AFPAIS
Sbjct: 59 QAKITKGYKLPAKYVIHTPGPIWKGGGHGEAELLASCYRSSLTLAVEHSCRTVAFPAISA 118
Query: 140 GV 141
GV
Sbjct: 119 GV 120
>gi|358466840|ref|ZP_09176626.1| hypothetical protein HMPREF9093_01101 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|357068651|gb|EHI78643.1| hypothetical protein HMPREF9093_01101 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 175
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 73/132 (55%), Gaps = 10/132 (7%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K +KI GDI++ + IV+ N L +GG AI AAG +L K C +I
Sbjct: 3 KDIIKIVSGDITKIP---EVEVIVNAANNQLEMGGGVCGAIFRAAGGELAKECKEIG--- 56
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
C GEA IT G+ LP ++IHTVGP ++ N E + LRSAY L + K N ++
Sbjct: 57 ---GCATGEAVITKGYNLPNKYIIHTVGPRYSTGENGEAENLRSAYYESLELAKKNGLRK 113
Query: 132 IAFPAISCGVSQ 143
IAFP++S G+ +
Sbjct: 114 IAFPSVSTGIYR 125
>gi|121997700|ref|YP_001002487.1| appr-1-p processing domain-containing protein [Halorhodospira
halophila SL1]
gi|121589105|gb|ABM61685.1| Appr-1-p processing domain protein [Halorhodospira halophila SL1]
Length = 181
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 72/140 (51%), Gaps = 15/140 (10%)
Query: 1 MTFKVQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPD 60
M + L+ T+ ++GD DA+V+ N L+ GG A A+H AAGP+
Sbjct: 1 MQARFAELTVETRVGDIAAQGD---------CDAVVNAANAQLMPGGGVAGALHRAAGPE 51
Query: 61 LQKACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNC 120
L +AC +P PG+A IT GF LP HVIH +GPV+ E +L + Y+N
Sbjct: 52 LAEAC------RPLAPIQPGQAVITAGFGLPNRHVIHCLGPVYGVDEPGEQLLAACYRNA 105
Query: 121 LSVGKANNIQYIAFPAISCG 140
L + + + +A PA+S G
Sbjct: 106 LHRAEEHELTRVAMPALSTG 125
>gi|435851222|ref|YP_007312808.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Methanomethylovorans hollandica DSM 15978]
gi|433661852|gb|AGB49278.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Methanomethylovorans hollandica DSM 15978]
Length = 178
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 64/114 (56%), Gaps = 7/114 (6%)
Query: 28 VDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPG 87
V + DAIV+ N LL G AIH AAGP L + C ++ CP GEARIT G
Sbjct: 16 VTQHVDAIVNAANNSLLGGEGVDGAIHRAAGPKLLEECRKLG------GCPTGEARITKG 69
Query: 88 FKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAFPAISCG 140
+ LP VIHTVGPV+ + E+ +L AY++ L + +I IAFP IS G
Sbjct: 70 YSLPAKWVIHTVGPVWKGGMHGEEKMLYRAYQSSLELAHQYDIGSIAFPGISIG 123
>gi|311106191|ref|YP_003979044.1| Appr-1-p processing domain-containing protein [Achromobacter
xylosoxidans A8]
gi|310760880|gb|ADP16329.1| Appr-1-p processing domain protein [Achromobacter xylosoxidans A8]
Length = 172
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 73/129 (56%), Gaps = 11/129 (8%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
TSL+ + DI++ VD AIV+ N LL GG AIH AAGPDL + C +
Sbjct: 3 TSLRAIRSDITKLQVD----AIVNAANSSLLGGGGVDGAIHRAAGPDLLQECSLLGG--- 55
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
C G+A++T ++L ++IHTVGPV+ + E +L S Y+ C+ + + + I
Sbjct: 56 ---CKTGDAKVTQAYRLSARYIIHTVGPVWRGGDSGEPALLASCYRRCIELAEERAVTSI 112
Query: 133 AFPAISCGV 141
AFP+IS GV
Sbjct: 113 AFPSISTGV 121
>gi|449117219|ref|ZP_21753663.1| hypothetical protein HMPREF9726_01648 [Treponema denticola H-22]
gi|448952483|gb|EMB33287.1| hypothetical protein HMPREF9726_01648 [Treponema denticola H-22]
Length = 176
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 75/132 (56%), Gaps = 11/132 (8%)
Query: 11 STKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPE 70
+T T ++I DI++ VD AIV+ N LL G AIH AAGP+L + C +
Sbjct: 3 NTSTLIEIINADITKLKVD----AIVNAANTTLLGGSGVDGAIHAAAGPELLEECRTLK- 57
Query: 71 AQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNI 129
C GEA+IT +KLP +VIHT GPV+ N E ++L ++Y++CL++
Sbjct: 58 -----GCKTGEAKITGAYKLPSKYVIHTPGPVYENGKNGEPELLANSYRSCLNLAFEYGC 112
Query: 130 QYIAFPAISCGV 141
+ IAFP IS GV
Sbjct: 113 KSIAFPCISTGV 124
>gi|256077248|ref|XP_002574919.1| hypothetical protein [Schistosoma mansoni]
gi|353229052|emb|CCD75223.1| hypothetical protein Smp_140900.2 [Schistosoma mansoni]
Length = 224
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 72/132 (54%), Gaps = 16/132 (12%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
+ + + +GDI+ +D AI + N L GG AIH AAG L +AC ++
Sbjct: 27 SRISLWRGDITHLQID----AIANAANSQLRGGGGVDGAIHRAAGSQLLEACQKLSG--- 79
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDI-LRSAYKNCLSVGKANNIQYI 132
CP G+A++TPGF LP +VIH VGPV D+ L S Y+ L + +NIQ I
Sbjct: 80 ---CPTGDAKLTPGFNLPSKYVIHCVGPV-----GRNDVALESTYRKALELCSEHNIQSI 131
Query: 133 AFPAISCGVSQI 144
AFP IS GV ++
Sbjct: 132 AFPCISTGVYEV 143
>gi|27380821|ref|NP_772350.1| hypothetical protein bll5710 [Bradyrhizobium japonicum USDA 110]
gi|27353986|dbj|BAC50975.1| bll5710 [Bradyrhizobium japonicum USDA 110]
Length = 183
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 64/112 (57%), Gaps = 7/112 (6%)
Query: 31 SSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKL 90
S DAIV+ N LL GG AIH AAGPDL C + C G A+IT G++L
Sbjct: 24 SVDAIVNAANTSLLGGGGVDGAIHRAAGPDLVAECRMLHG------CKTGNAKITMGYRL 77
Query: 91 PVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
+HVIHTVGPV+N ED +L S Y+ + + + + +AFPAIS G+
Sbjct: 78 KAAHVIHTVGPVWNGGTLDEDGLLASCYRRSMELCGKHKLTSVAFPAISTGI 129
>gi|449127009|ref|ZP_21763283.1| hypothetical protein HMPREF9733_00686 [Treponema denticola SP33]
gi|448944677|gb|EMB25554.1| hypothetical protein HMPREF9733_00686 [Treponema denticola SP33]
Length = 176
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 75/132 (56%), Gaps = 11/132 (8%)
Query: 11 STKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPE 70
+T T ++I DI++ VD AIV+ N LL G AIH AAGP+L + C +
Sbjct: 3 NTSTLIEIINADITKLKVD----AIVNAANTTLLGGSGVDGAIHAAAGPELLEECRTLK- 57
Query: 71 AQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNI 129
C GEA+IT +KLP +VIHT GPV+ N E ++L ++Y++CL++
Sbjct: 58 -----GCKTGEAKITGAYKLPSKYVIHTPGPVYENGKNGEPELLANSYRSCLNLAFEYGC 112
Query: 130 QYIAFPAISCGV 141
+ IAFP IS GV
Sbjct: 113 KSIAFPCISTGV 124
>gi|403283679|ref|XP_003933238.1| PREDICTED: O-acetyl-ADP-ribose deacetylase MACROD2 isoform 2
[Saimiri boliviensis boliviensis]
Length = 424
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 2 TFKVQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDL 61
T ++ + S + + +GDI+ VD AIV+ N LL GG IH AAGP L
Sbjct: 58 TQEISQMKKSLAEKVSLYRGDITLLEVD----AIVNAANASLLGGGGVDGCIHRAAGPCL 113
Query: 62 QKACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNP--EDILRSAYKN 119
C + C G A+IT G+ LP +VIHTVGP+ H N ++ L + YK+
Sbjct: 114 LAECRNLN------GCDTGHAKITCGYDLPAKYVIHTVGPIARGHINGSHKEDLANCYKS 167
Query: 120 CLSVGKANNIQYIAFPAISCGV 141
L + K NNI+ +AFP IS G+
Sbjct: 168 SLKLVKENNIRSVAFPCISTGI 189
>gi|399909160|ref|ZP_10777712.1| Appr-1-p processing protein [Halomonas sp. KM-1]
Length = 174
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 71/126 (56%), Gaps = 11/126 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L+ +GDI+ D +V+ N L GG A A+H AAGP+L++AC +P
Sbjct: 5 LECQQGDIANQ---PDIDVVVNAANAQLRTGGGVAGALHRAAGPELERAC------RPLA 55
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
PG+A IT F LP HVIH +GPV+ H PE ++L Y+N L + + + + IAF
Sbjct: 56 PIAPGQAVITEAFGLPNRHVIHCLGPVYG-HDRPEAELLADCYRNALELAERHGLASIAF 114
Query: 135 PAISCG 140
PA+S G
Sbjct: 115 PALSAG 120
>gi|310817599|ref|YP_003949957.1| hypothetical protein STAUR_0321 [Stigmatella aurantiaca DW4/3-1]
gi|309390671|gb|ADO68130.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 174
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 67/112 (59%), Gaps = 7/112 (6%)
Query: 31 SSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKL 90
++DAIV+ NE LL GG AIH AAG +L + C + CP GEARIT G++L
Sbjct: 11 AADAIVNAANESLLGGGGVDGAIHRAAGAELLEECRTLGG------CPTGEARITRGYRL 64
Query: 91 PVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
P HVIHTVGP ++ E +L Y++ + + + ++ +AFP+IS GV
Sbjct: 65 PARHVIHTVGPRWHGGGQGEAALLARCYQSVFARMEEHGLRTVAFPSISTGV 116
>gi|422458536|ref|ZP_16535188.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL050PA2]
gi|315104430|gb|EFT76406.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL050PA2]
Length = 171
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 59/109 (54%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DA+V+ N L GG AIH AAGP+L +AC ++ E P G++ T K+P
Sbjct: 17 DAVVNAANRQLAGGGGVDGAIHRAAGPELSQACRKLRETTLTDGLPTGQSVATTAGKMPA 76
Query: 93 SHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
VIHTVGPV+ + D L S Y+ CL V + IAFP IS GV
Sbjct: 77 KWVIHTVGPVWAKTIDKSDQLASCYRTCLHVADEIGARTIAFPTISAGV 125
>gi|333983750|ref|YP_004512960.1| Appr-1-p processing protein [Methylomonas methanica MC09]
gi|333807791|gb|AEG00461.1| Appr-1-p processing domain protein [Methylomonas methanica MC09]
Length = 172
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 68/127 (53%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ + DI+ VD AIV+ N LL GG AIH AAGP L C +
Sbjct: 1 MRVVQADITALIVD----AIVNAANSSLLGGGGVDGAIHRAAGPQLLAECRTLGG----- 51
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
C GEA++T G++LP +VIH VGPV+ E +L YKN L + NN+ +AF
Sbjct: 52 -CATGEAKLTGGYRLPAKYVIHAVGPVWRGGGENEPALLADCYKNALKLAVRNNLHSVAF 110
Query: 135 PAISCGV 141
P IS G+
Sbjct: 111 PCISTGI 117
>gi|296200221|ref|XP_002747502.1| PREDICTED: O-acetyl-ADP-ribose deacetylase MACROD2 isoform 1
[Callithrix jacchus]
Length = 447
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 2 TFKVQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDL 61
T ++ + S + + +GDI+ VD AIV+ N LL GG IH AAGP L
Sbjct: 58 TQEISQMKKSLAEKVSLYRGDITLLEVD----AIVNAANASLLGGGGVDGCIHRAAGPCL 113
Query: 62 QKACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNP--EDILRSAYKN 119
C + C G A+IT G+ LP +VIHTVGP+ H N ++ L + YK+
Sbjct: 114 LAECRNLN------GCDTGHAKITCGYDLPAKYVIHTVGPIARGHINGSHKEDLANCYKS 167
Query: 120 CLSVGKANNIQYIAFPAISCGV 141
L + K NNI+ +AFP IS G+
Sbjct: 168 SLKLVKENNIRSVAFPCISTGI 189
>gi|326803830|ref|YP_004321648.1| macro domain-containing protein [Aerococcus urinae
ACS-120-V-Col10a]
gi|326650545|gb|AEA00728.1| macro domain protein [Aerococcus urinae ACS-120-V-Col10a]
Length = 154
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 74/128 (57%), Gaps = 11/128 (8%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+ +I GDI++ V+ AIV+ N LL GG AIH+AAGP+L C Q+
Sbjct: 2 TFQIVHGDITQVEVE----AIVNAANSSLLGGGGVDGAIHQAAGPELLAECKQLG----- 52
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIA 133
CP G+A++T G++LP +VIHTVGPV+ E+ +L S Y L + + ++ +A
Sbjct: 53 -GCPTGQAKLTRGYQLPADYVIHTVGPVWQGGDQKEEALLTSCYLESLQLAASIPVKSLA 111
Query: 134 FPAISCGV 141
FP IS GV
Sbjct: 112 FPLISAGV 119
>gi|429104032|ref|ZP_19166006.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Cronobacter turicensis 564]
gi|426290681|emb|CCJ92119.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Cronobacter turicensis 564]
Length = 180
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 68/127 (53%), Gaps = 7/127 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ + +GDI+R +D IV+ N L+ GG AIH AAGP L AC + + Q
Sbjct: 5 INVVQGDITRI----DTDVIVNAANPSLMGGGGVDGAIHRAAGPALLAACKVVRQQQGE- 59
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C PG A IT L VIHTVGP++ H N +L AY+N L + AN +AF
Sbjct: 60 -CQPGHAVITEAGDLAAKAVIHTVGPIWRGGHDNEPQLLADAYRNSLELVTANGYDSVAF 118
Query: 135 PAISCGV 141
PAIS G+
Sbjct: 119 PAISTGI 125
>gi|241661819|ref|YP_002980179.1| hypothetical protein Rpic12D_0197 [Ralstonia pickettii 12D]
gi|240863846|gb|ACS61507.1| Appr-1-p processing domain protein [Ralstonia pickettii 12D]
Length = 171
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 72/128 (56%), Gaps = 11/128 (8%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+L+ +GDI+ DAIV+ N LL GG AIH AAGP+L +AC +
Sbjct: 7 ALRALRGDITTL----DCDAIVNAANSSLLGGGGVDGAIHRAAGPELLEACRALHG---- 58
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSA-YKNCLSVGKANNIQYIA 133
C GEA++TPGF+L +VIHTVGP++ E L +A Y+N L + ++ IA
Sbjct: 59 --CRTGEAKLTPGFQLTARYVIHTVGPIWRGGRQDEAALLAACYRNSLELACKYEVRSIA 116
Query: 134 FPAISCGV 141
FP IS G+
Sbjct: 117 FPCISTGI 124
>gi|254302198|ref|ZP_04969556.1| hypothetical protein FNP_2250 [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148322390|gb|EDK87640.1| hypothetical protein FNP_2250 [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 175
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 72/132 (54%), Gaps = 10/132 (7%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K +K+ GDI++ +AIV+ N L +GG AI AAG +L K C +I
Sbjct: 3 KDIIKLVNGDITKIP---EVEAIVNAANNYLEMGGGVCGAIFRAAGTELIKECKEIG--- 56
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
C GEA IT G+ LP ++IHTVGP + N E + L+SAY L + K I+
Sbjct: 57 ---SCKTGEAVITKGYNLPNKYIIHTVGPRYTNSENGEAEKLKSAYYESLKLAKKKGIRK 113
Query: 132 IAFPAISCGVSQ 143
IAFP+IS G+ +
Sbjct: 114 IAFPSISTGIYR 125
>gi|339499773|ref|YP_004697808.1| Appr-1-p processing domain-containing protein [Spirochaeta caldaria
DSM 7334]
gi|338834122|gb|AEJ19300.1| Appr-1-p processing domain protein [Spirochaeta caldaria DSM 7334]
Length = 182
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 78/142 (54%), Gaps = 10/142 (7%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ KGDI+ VD AIV+ N LL GG AIH AAGP L + C I
Sbjct: 9 IEVLKGDITSLKVD----AIVNAANSSLLGGGGVDGAIHRAAGPQLLEECRVINRTLGG- 63
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPV-FNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
CP G+A IT LP ++VIHTVGPV + N ++L S Y+ L + +A++ IAF
Sbjct: 64 -CPTGKAVITGAGNLPCTYVIHTVGPVWYGGTYNEANLLASCYRESLQLAEAHHCTSIAF 122
Query: 135 PAISCGVS---QIMTHAIKLQT 153
P IS GV +++ + LQT
Sbjct: 123 PNISTGVYGYPKLLAAEVALQT 144
>gi|167037379|ref|YP_001664957.1| appr-1-p processing domain-containing protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|167040047|ref|YP_001663032.1| appr-1-p processing domain-containing protein [Thermoanaerobacter
sp. X514]
gi|300914131|ref|ZP_07131447.1| Appr-1-p processing domain protein [Thermoanaerobacter sp. X561]
gi|307724633|ref|YP_003904384.1| Appr-1-p processing domain-containing protein [Thermoanaerobacter
sp. X513]
gi|320115793|ref|YP_004185952.1| Appr-1-p processing domain-containing protein [Thermoanaerobacter
brockii subsp. finnii Ako-1]
gi|166854287|gb|ABY92696.1| Appr-1-p processing domain protein [Thermoanaerobacter sp. X514]
gi|166856213|gb|ABY94621.1| Appr-1-p processing domain protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|300889066|gb|EFK84212.1| Appr-1-p processing domain protein [Thermoanaerobacter sp. X561]
gi|307581694|gb|ADN55093.1| Appr-1-p processing domain protein [Thermoanaerobacter sp. X513]
gi|319928884|gb|ADV79569.1| Appr-1-p processing domain protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
Length = 174
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 70/129 (54%), Gaps = 7/129 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K +K+ KG+I VD+ DAIV+ N L GG AIH A GP + + C I E Q
Sbjct: 2 KEKIKLIKGNI----VDQEVDAIVNAANSSLSGGGGVDGAIHRAGGPSIAEECRVIREKQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQY 131
CP G A IT L +VIH VGP++ + N +++L SAY L + N++
Sbjct: 58 G--GCPTGHAVITGAGNLKAKYVIHAVGPIWRGGNHNEDNLLASAYIESLKLADEYNVKT 115
Query: 132 IAFPAISCG 140
IAFP+IS G
Sbjct: 116 IAFPSISTG 124
>gi|317125295|ref|YP_004099407.1| Appr-1-p processing protein [Intrasporangium calvum DSM 43043]
gi|315589383|gb|ADU48680.1| Appr-1-p processing domain protein [Intrasporangium calvum DSM
43043]
Length = 185
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 68/128 (53%), Gaps = 10/128 (7%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
++I +GDI+ D +DAIV+ N LL GG AIH AAGP L C ++
Sbjct: 14 GIEILRGDIT---TDAEADAIVNAANATLLGGGGVDGAIHRAAGPGLLAECRRLGG---- 66
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIA 133
C G+A++T +LP HVIH VGPV+ E +L S Y+ + + +A
Sbjct: 67 --CATGDAKLTGAGRLPARHVIHAVGPVWRGGGAGEAALLASCYRRSVELAAEARCAVVA 124
Query: 134 FPAISCGV 141
FPAISCG+
Sbjct: 125 FPAISCGI 132
>gi|83647553|ref|YP_435988.1| phosphatase [Hahella chejuensis KCTC 2396]
gi|83635596|gb|ABC31563.1| predicted phosphatase [Hahella chejuensis KCTC 2396]
Length = 178
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 67/130 (51%), Gaps = 11/130 (8%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
+ + I +GDI+R VD AIV+ N L GG AIH AAGP L + C +
Sbjct: 3 RDRIDILRGDITRLQVD----AIVNAANSALCGGGGVDGAIHRAAGPGLLQECRTLG--- 55
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQY 131
RC G A+ T + LP V H VGPV+ N + +L S Y+ C + + +
Sbjct: 56 ---RCETGYAKATKAYNLPAQWVFHAVGPVWRGGDANEDALLASCYQECFRLAQQYAVTS 112
Query: 132 IAFPAISCGV 141
+AFPAISCGV
Sbjct: 113 MAFPAISCGV 122
>gi|296200223|ref|XP_002747503.1| PREDICTED: O-acetyl-ADP-ribose deacetylase MACROD2 isoform 2
[Callithrix jacchus]
Length = 424
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 2 TFKVQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDL 61
T ++ + S + + +GDI+ VD AIV+ N LL GG IH AAGP L
Sbjct: 58 TQEISQMKKSLAEKVSLYRGDITLLEVD----AIVNAANASLLGGGGVDGCIHRAAGPCL 113
Query: 62 QKACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNP--EDILRSAYKN 119
C + C G A+IT G+ LP +VIHTVGP+ H N ++ L + YK+
Sbjct: 114 LAECRNLN------GCDTGHAKITCGYDLPAKYVIHTVGPIARGHINGSHKEDLANCYKS 167
Query: 120 CLSVGKANNIQYIAFPAISCGV 141
L + K NNI+ +AFP IS G+
Sbjct: 168 SLKLVKENNIRSVAFPCISTGI 189
>gi|358459421|ref|ZP_09169619.1| Appr-1-p processing domain protein [Frankia sp. CN3]
gi|357077225|gb|EHI86686.1| Appr-1-p processing domain protein [Frankia sp. CN3]
Length = 185
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 68/130 (52%), Gaps = 4/130 (3%)
Query: 11 STKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPE 70
S+ + GDI++ VD AIV+ N LL GG AIH A GP++ AC ++ E
Sbjct: 3 SSTAKVTFVHGDITQQQVD----AIVNAANSSLLGGGGVDGAIHWAGGPEILAACRRLRE 58
Query: 71 AQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQ 130
+ P G A T +LP HVIH VGPV++ + +LRS Y + V A +
Sbjct: 59 TEYPKGLPAGGAVATTAGQLPARHVIHVVGPVYSTRADRSTLLRSCYVEAIRVAAALEAR 118
Query: 131 YIAFPAISCG 140
IAFPA+S G
Sbjct: 119 TIAFPAVSTG 128
>gi|345789513|ref|XP_003433240.1| PREDICTED: MACRO domain-containing protein 2 [Canis lupus
familiaris]
Length = 429
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 73/135 (54%), Gaps = 14/135 (10%)
Query: 9 SFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQI 68
S S K SL +GDI+ VD AIV+ N LL GG IH AAGP L C +
Sbjct: 67 SLSGKVSL--YRGDITLLEVD----AIVNAANASLLGGGGVDGCIHRAAGPCLLAECRNL 120
Query: 69 PEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNP--EDILRSAYKNCLSVGKA 126
C G A+IT G+ LP +VIHTVGP+ H N ++ L + YK+ L + K
Sbjct: 121 N------GCETGHAKITCGYDLPAKYVIHTVGPIARGHINGSHKEDLANCYKSSLKLMKE 174
Query: 127 NNIQYIAFPAISCGV 141
NNI+ +AFP IS G+
Sbjct: 175 NNIRSVAFPCISTGI 189
>gi|67525391|ref|XP_660757.1| hypothetical protein AN3153.2 [Aspergillus nidulans FGSC A4]
gi|40744548|gb|EAA63724.1| hypothetical protein AN3153.2 [Aspergillus nidulans FGSC A4]
gi|259485892|tpe|CBF83301.1| TPA: LRP16 family protein (AFU_orthologue; AFUA_3G13850)
[Aspergillus nidulans FGSC A4]
Length = 374
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 63/114 (55%), Gaps = 11/114 (9%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
D IV+ LL GG AIH+AAGPDL K C + C G+A+IT + LP
Sbjct: 54 DCIVNAAKRSLLGGGGVDYAIHKAAGPDLLKECRTL------NGCDTGDAKITNAYNLPN 107
Query: 93 SHVIHTVGPVFNFHC-----NPEDILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
+IHTVGP+++ PE +LRS Y+ CL V N ++ IAF AIS G+
Sbjct: 108 KRIIHTVGPIYSDAMRRGKDEPERLLRSCYRRCLEVAVENEMKSIAFNAISTGI 161
>gi|409048938|gb|EKM58416.1| hypothetical protein PHACADRAFT_252719 [Phanerochaete carnosa
HHB-10118-sp]
Length = 256
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 73/134 (54%), Gaps = 13/134 (9%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N+ LL GG AIH AAG L + C + C G+A+IT G+ LP
Sbjct: 53 DAIVNAANKSLLGGGGVDGAIHSAAGRKLVEECRTLH------GCETGDAKITKGYDLPA 106
Query: 93 SHVIHTVGPVFNFHCNP--EDILRSAYKNCLSVGKANNIQYIAFPAISCGVS----QIMT 146
HVIH VGPV++ H ++L S Y+ + + N+ ++IAFP+IS G+ + T
Sbjct: 107 KHVIHAVGPVYSSHHTQTCAELLASCYRRSMELAAQNSQRHIAFPSISTGIYGYPVEDAT 166
Query: 147 HAIKLQTNCGFLES 160
H I L GFL S
Sbjct: 167 H-IALDEVRGFLSS 179
>gi|256077250|ref|XP_002574920.1| hypothetical protein [Schistosoma mansoni]
gi|353229053|emb|CCD75224.1| hypothetical protein Smp_140900.1 [Schistosoma mansoni]
Length = 194
Score = 85.5 bits (210), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 78/151 (51%), Gaps = 19/151 (12%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
+ + + +GDI+ +D AI + N L GG AIH AAG L +AC ++
Sbjct: 27 SRISLWRGDITHLQID----AIANAANSQLRGGGGVDGAIHRAAGSQLLEACQKLSG--- 79
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDI-LRSAYKNCLSVGKANNIQYI 132
CP G+A++TPGF LP +VIH VGPV D+ L S Y+ L + +NIQ I
Sbjct: 80 ---CPTGDAKLTPGFNLPSKYVIHCVGPV-----GRNDVALESTYRKALELCSEHNIQSI 131
Query: 133 AFPAISCGVSQIMTHA---IKLQTNCGFLES 160
AFP IS GV A + L T +L+S
Sbjct: 132 AFPCISTGVYGFPNEAAAKVALHTVLSYLKS 162
>gi|326389818|ref|ZP_08211382.1| Appr-1-p processing domain protein [Thermoanaerobacter ethanolicus
JW 200]
gi|345017445|ref|YP_004819798.1| Appr-1-p processing protein [Thermoanaerobacter wiegelii Rt8.B1]
gi|325994086|gb|EGD52514.1| Appr-1-p processing domain protein [Thermoanaerobacter ethanolicus
JW 200]
gi|344032788|gb|AEM78514.1| Appr-1-p processing domain protein [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 174
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 70/129 (54%), Gaps = 7/129 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K +K+ KG+I VD+ DAIV+ N L GG AIH A GP + + C I E Q
Sbjct: 2 KERIKLIKGNI----VDQEVDAIVNAANSSLSGGGGVDGAIHRAGGPSIDEECRIIREKQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQY 131
CP G A IT L +VIH VGP++ + N +++L SAY L + N++
Sbjct: 58 G--GCPTGHAVITGAGNLKAKYVIHAVGPIWRGGNHNEDNLLASAYIESLKLADEYNVKT 115
Query: 132 IAFPAISCG 140
IAFP+IS G
Sbjct: 116 IAFPSISTG 124
>gi|256752909|ref|ZP_05493743.1| Appr-1-p processing domain protein [Thermoanaerobacter ethanolicus
CCSD1]
gi|289578161|ref|YP_003476788.1| Appr-1-p processing domain-containing protein [Thermoanaerobacter
italicus Ab9]
gi|256748206|gb|EEU61276.1| Appr-1-p processing domain protein [Thermoanaerobacter ethanolicus
CCSD1]
gi|289527874|gb|ADD02226.1| Appr-1-p processing domain protein [Thermoanaerobacter italicus
Ab9]
Length = 174
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 70/129 (54%), Gaps = 7/129 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K +K+ KG+I VD+ DAIV+ N L GG AIH A GP + + C I E Q
Sbjct: 2 KERIKLIKGNI----VDQEVDAIVNAANSSLSGGGGVDGAIHRAGGPSIAEECRVIREKQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQY 131
CP G A IT L +VIH VGP++ + N +++L SAY L + N++
Sbjct: 58 G--GCPTGHAVITGAGNLKAKYVIHAVGPIWRGGNHNEDNLLASAYIESLKLADEYNVKT 115
Query: 132 IAFPAISCG 140
IAFP+IS G
Sbjct: 116 IAFPSISTG 124
>gi|242781663|ref|XP_002479846.1| LRP16 family protein [Talaromyces stipitatus ATCC 10500]
gi|218719993|gb|EED19412.1| LRP16 family protein [Talaromyces stipitatus ATCC 10500]
Length = 305
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 66/122 (54%), Gaps = 12/122 (9%)
Query: 22 DISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGE 81
DI+R VD IV+ N+ L GG AIH AAG L C + C G+
Sbjct: 48 DITRLQVD----GIVNAANQWLQGGGGVDGAIHHAAGSQLLAECRTLD------GCNTGD 97
Query: 82 ARITPGFKLPVSHVIHTVGPVFN--FHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISC 139
A+IT G+ LP + VIH VGP++ +H E +LRS Y+ L + NN++ +AF AIS
Sbjct: 98 AKITNGYNLPAAKVIHAVGPIYEERYHLTLERLLRSCYRRSLQLAVENNLRSVAFSAIST 157
Query: 140 GV 141
GV
Sbjct: 158 GV 159
>gi|154251089|ref|YP_001411913.1| appr-1-p processing domain-containing protein [Parvibaculum
lavamentivorans DS-1]
gi|154155039|gb|ABS62256.1| Appr-1-p processing domain protein [Parvibaculum lavamentivorans
DS-1]
Length = 172
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 70/129 (54%), Gaps = 11/129 (8%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T+++I GDI++ +SDAIV+ NE L GG AI AAG L + C +
Sbjct: 6 TAIEIRVGDITKL----TSDAIVNAANERLAPGGGVCGAIFRAAGAGLAEECRALGG--- 58
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
CP GEARIT G+ LP +IH VGPV+ E +L Y+N L++ ++ I
Sbjct: 59 ---CPAGEARITGGYGLPARWIIHAVGPVWRGGGEGEAALLAGCYRNALALAAEKKLETI 115
Query: 133 AFPAISCGV 141
FPAIS G+
Sbjct: 116 VFPAISTGI 124
>gi|403283681|ref|XP_003933239.1| PREDICTED: O-acetyl-ADP-ribose deacetylase MACROD2 isoform 3
[Saimiri boliviensis boliviensis]
Length = 475
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 2 TFKVQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDL 61
T ++ + S + + +GDI+ VD AIV+ N LL GG IH AAGP L
Sbjct: 58 TQEISQMKKSLAEKVSLYRGDITLLEVD----AIVNAANASLLGGGGVDGCIHRAAGPCL 113
Query: 62 QKACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNP--EDILRSAYKN 119
C + C G A+IT G+ LP +VIHTVGP+ H N ++ L + YK+
Sbjct: 114 LAECRNL------NGCDTGHAKITCGYDLPAKYVIHTVGPIARGHINGSHKEDLANCYKS 167
Query: 120 CLSVGKANNIQYIAFPAISCGV 141
L + K NNI+ +AFP IS G+
Sbjct: 168 SLKLVKENNIRSVAFPCISTGI 189
>gi|422340733|ref|ZP_16421674.1| appr-1-p processing enzyme domain-containing protein [Treponema
denticola F0402]
gi|325475137|gb|EGC78322.1| appr-1-p processing enzyme domain-containing protein [Treponema
denticola F0402]
Length = 176
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 75/132 (56%), Gaps = 11/132 (8%)
Query: 11 STKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPE 70
+T T ++I DI++ VD AIV+ N LL G AIH AAGP+L + C +
Sbjct: 3 NTSTLIEIINADITKLKVD----AIVNAANTTLLGGSGVDGAIHAAAGPELLEECRTLK- 57
Query: 71 AQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNI 129
C GEA+IT +KLP +VIHT GPV+ N E ++L ++Y++CL++
Sbjct: 58 -----GCKTGEAKITGAYKLPSKYVIHTPGPVYENGKNGEAELLANSYRSCLNLAFEYGC 112
Query: 130 QYIAFPAISCGV 141
+ IAFP IS G+
Sbjct: 113 KSIAFPCISTGI 124
>gi|383762871|ref|YP_005441853.1| hypothetical protein CLDAP_19160 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381383139|dbj|BAL99955.1| hypothetical protein CLDAP_19160 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 186
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 75/133 (56%), Gaps = 12/133 (9%)
Query: 10 FSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIP 69
+ ++ L+I + DI+ VD AIV+ N LL GG AIH AAGP L C +
Sbjct: 1 MTHESRLEIIQADITTLRVD----AIVNAANSSLLGGGGVDGAIHRAAGPGLLAECRTLG 56
Query: 70 EAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKAN- 127
CP GEAR+T G+ LP +VIHTVGPV+ + ED +L Y++ ++ +
Sbjct: 57 G------CPTGEARLTRGYNLPARYVIHTVGPVWRGGKHGEDALLAQCYRSVFAIAAGHE 110
Query: 128 NIQYIAFPAISCG 140
+I+ IAFP+IS G
Sbjct: 111 DIRTIAFPSISTG 123
>gi|390462500|ref|XP_003732863.1| PREDICTED: O-acetyl-ADP-ribose deacetylase MACROD2 [Callithrix
jacchus]
Length = 475
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 2 TFKVQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDL 61
T ++ + S + + +GDI+ VD AIV+ N LL GG IH AAGP L
Sbjct: 58 TQEISQMKKSLAEKVSLYRGDITLLEVD----AIVNAANASLLGGGGVDGCIHRAAGPCL 113
Query: 62 QKACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNP--EDILRSAYKN 119
C + C G A+IT G+ LP +VIHTVGP+ H N ++ L + YK+
Sbjct: 114 LAECRNLN------GCDTGHAKITCGYDLPAKYVIHTVGPIARGHINGSHKEDLANCYKS 167
Query: 120 CLSVGKANNIQYIAFPAISCGV 141
L + K NNI+ +AFP IS G+
Sbjct: 168 SLKLVKENNIRSVAFPCISTGI 189
>gi|386347797|ref|YP_006046046.1| Appr-1-p processing protein [Spirochaeta thermophila DSM 6578]
gi|339412764|gb|AEJ62329.1| Appr-1-p processing domain protein [Spirochaeta thermophila DSM
6578]
Length = 181
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 71/128 (55%), Gaps = 13/128 (10%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++ +GDI+ +AIV+ N +L+ GG A AIH AAGP L + C R
Sbjct: 11 IETRQGDIASQP---DLEAIVNAANAMLMPGGGVAGAIHRAAGPGLAEEC--------RT 59
Query: 76 RCP--PGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
P PGEA IT G LP +VIHT+GPV+ DIL Y+N L++ + + I+ +
Sbjct: 60 YAPIKPGEAVITGGHNLPNRYVIHTLGPVYGQDKPEADILARCYENSLTLCEKHQIESVG 119
Query: 134 FPAISCGV 141
FPAIS GV
Sbjct: 120 FPAISTGV 127
>gi|408528180|emb|CCK26354.1| UPF0189 protein [Streptomyces davawensis JCM 4913]
Length = 169
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 69/128 (53%), Gaps = 4/128 (3%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T++ + +GDI+R +S DAIV+ N LL GG AIH GP++ C ++ +
Sbjct: 2 TTITLIQGDITR----QSVDAIVNAANSSLLGGGGVDGAIHRRGGPEILAECRKLRASHY 57
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
P G+A T KL VIHTVGPVF+ + D+L S Y+ L V + +A
Sbjct: 58 GKGLPTGQAIATTAGKLDARWVIHTVGPVFSDTEDRSDLLASCYRESLRVADELGARTVA 117
Query: 134 FPAISCGV 141
FPA+S GV
Sbjct: 118 FPAVSTGV 125
>gi|359776618|ref|ZP_09279925.1| hypothetical protein ARGLB_047_01040 [Arthrobacter globiformis NBRC
12137]
gi|359306157|dbj|GAB13754.1| hypothetical protein ARGLB_047_01040 [Arthrobacter globiformis NBRC
12137]
Length = 176
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 72/129 (55%), Gaps = 10/129 (7%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++I +GDI+ R+ DA+V+ N LL GG AIH AAGP+L +AC ++ R
Sbjct: 3 IEIVEGDIT----GRTVDAVVNAANSSLLGGGGVDGAIHRAAGPELLEACRELRATTLRD 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHC---NPEDILRSAYKNCLSVGKANNIQYI 132
P G A TPG+ L VIHTVGP N H NP +L S + L + + ++ +
Sbjct: 59 GLPVGAAVATPGYGLQAQWVIHTVGP--NRHAGQTNPA-LLASCFTESLRIAEGLGVRSL 115
Query: 133 AFPAISCGV 141
AFPA+S GV
Sbjct: 116 AFPAVSAGV 124
>gi|449103770|ref|ZP_21740513.1| hypothetical protein HMPREF9730_01410 [Treponema denticola AL-2]
gi|448964223|gb|EMB44895.1| hypothetical protein HMPREF9730_01410 [Treponema denticola AL-2]
Length = 176
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 75/132 (56%), Gaps = 11/132 (8%)
Query: 11 STKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPE 70
+T T ++I DI++ VD AIV+ N LL G AIH AAGP+L + C +
Sbjct: 3 NTSTLIEIINADITKLKVD----AIVNAANTTLLGGSGVDGAIHAAAGPELLEECRTLK- 57
Query: 71 AQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNI 129
C GEA+IT +KLP ++IHT GPV+ N E ++L ++Y++CL++
Sbjct: 58 -----GCKTGEAKITGAYKLPSKYIIHTPGPVYENGKNGEPELLANSYRSCLNLAFEYGC 112
Query: 130 QYIAFPAISCGV 141
+ IAFP IS GV
Sbjct: 113 KSIAFPCISTGV 124
>gi|83815204|ref|YP_444690.1| Appr-1-p processing enzyme family protein [Salinibacter ruber DSM
13855]
gi|83756598|gb|ABC44711.1| Appr-1-p processing enzyme family protein [Salinibacter ruber DSM
13855]
Length = 178
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 69/126 (54%), Gaps = 9/126 (7%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+++++ GDI++ +A+V+ N L GG A A+H AAGP L E +P
Sbjct: 6 TIELTTGDIAKQS---DVEAVVNAANAQLRSGGGVAGALHSAAGPGLAT------ETRPM 56
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
PGEA I+ LP HVIH +GPV+ +++LR+ Y+N L + N I +AF
Sbjct: 57 APIEPGEAVISGAHDLPNDHVIHVLGPVYGRDEPSDELLRTGYENALRQAEENGISSVAF 116
Query: 135 PAISCG 140
PA+S G
Sbjct: 117 PALSTG 122
>gi|347536707|ref|YP_004844132.1| putative bifunctional YmdB hypothetical protein/putative
ADP-ribosylglycohydrolase [Flavobacterium branchiophilum
FL-15]
gi|345529865|emb|CCB69895.1| Probable bifunctional protein: YmdB protein of unknown function and
putative ADP-ribosylglycohydrolase [Flavobacterium
branchiophilum FL-15]
Length = 496
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 69/127 (54%), Gaps = 7/127 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
LKI K DI++ VD AIV+ N LL GG AIH G + + C I Q
Sbjct: 3 LKIIKDDITKIAVD----AIVNAANSSLLGGGGVDGAIHSIGGKQILEECIVIRNKQGG- 57
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAF 134
C GEA IT LP + VIHTVGPV+N + +L + Y+N L + +NNI+ IAF
Sbjct: 58 -CNTGEAVITSAGNLPSNFVIHTVGPVWNGDKEEKKLLLENCYRNVLELAVSNNIKTIAF 116
Query: 135 PAISCGV 141
P IS G+
Sbjct: 117 PNISTGI 123
>gi|297544441|ref|YP_003676743.1| Appr-1-p processing domain-containing protein [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
gi|296842216|gb|ADH60732.1| Appr-1-p processing domain protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 174
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 70/129 (54%), Gaps = 7/129 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K +K+ KG+I VD+ DAIV+ N L GG AIH A GP + + C I E Q
Sbjct: 2 KERIKLIKGNI----VDQEVDAIVNAANSSLSGGGGVDGAIHRAGGPSIAEECRVIREKQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQY 131
CP G A IT L +VIH VGP++ + N +++L SAY L + N++
Sbjct: 58 G--GCPTGHAVITGAGNLKAKYVIHAVGPIWKGGNHNEDNLLASAYIESLKLADEYNVKT 115
Query: 132 IAFPAISCG 140
IAFP+IS G
Sbjct: 116 IAFPSISTG 124
>gi|226467758|emb|CAX69755.1| Pre-mRNA-processing-splicing factor 8 [Schistosoma japonicum]
Length = 177
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 72/135 (53%), Gaps = 14/135 (10%)
Query: 7 TLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACY 66
L+ + + + +GDI+ +D AI + N L GG AIH AAGP+L AC
Sbjct: 20 NLASDLGSRISLWRGDITHLRID----AIANAANRQLRGGGGVDGAIHRAAGPELLVACQ 75
Query: 67 QIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKA 126
++ CP G+A++TPGF LP +VIH VGP+ + L S Y+ L +
Sbjct: 76 KLGG------CPTGDAKLTPGFNLPSKYVIHCVGPI----GQNDAALGSTYQKALELCSE 125
Query: 127 NNIQYIAFPAISCGV 141
+NIQ IAFP IS GV
Sbjct: 126 HNIQSIAFPCISTGV 140
>gi|449130046|ref|ZP_21766273.1| hypothetical protein HMPREF9724_00938 [Treponema denticola SP37]
gi|448944439|gb|EMB25318.1| hypothetical protein HMPREF9724_00938 [Treponema denticola SP37]
Length = 176
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 75/132 (56%), Gaps = 11/132 (8%)
Query: 11 STKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPE 70
+T T ++I DI++ VD AIV+ N LL G AIH AAGP+L + C +
Sbjct: 3 NTSTLIEIINDDITKLKVD----AIVNAANTTLLGGSGVDGAIHAAAGPELLEECRTLK- 57
Query: 71 AQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNI 129
C GEA+IT +KLP ++IHT GPV+ N E ++L ++Y++CL++
Sbjct: 58 -----GCKTGEAKITGAYKLPSKYIIHTPGPVYENGKNGEAELLANSYRSCLNLAFEYGC 112
Query: 130 QYIAFPAISCGV 141
+ IAFP IS GV
Sbjct: 113 KSIAFPCISTGV 124
>gi|56756276|gb|AAW26313.1| SJCHGC06209 protein [Schistosoma japonicum]
Length = 194
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 72/135 (53%), Gaps = 14/135 (10%)
Query: 7 TLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACY 66
L+ + + + +GDI+ +D AI + N L GG AIH AAGP+L AC
Sbjct: 20 NLASDLGSRISLWRGDITHLRID----AIANAANRQLRGGGGVDGAIHRAAGPELLVACQ 75
Query: 67 QIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKA 126
++ CP G+A++TPGF LP +VIH VGP+ + L S Y+ L +
Sbjct: 76 KLGG------CPTGDAKLTPGFNLPSKYVIHCVGPI----GQNDAALGSTYQKALELCSE 125
Query: 127 NNIQYIAFPAISCGV 141
+NIQ IAFP IS GV
Sbjct: 126 HNIQSIAFPCISTGV 140
>gi|108803504|ref|YP_643441.1| Appr-1-p processing [Rubrobacter xylanophilus DSM 9941]
gi|108764747|gb|ABG03629.1| Appr-1-p processing [Rubrobacter xylanophilus DSM 9941]
Length = 179
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 68/127 (53%), Gaps = 9/127 (7%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T +++ +GDI+ +A+V+ N L+ GG A AIH AAGP L + C +P
Sbjct: 8 TEVEVVRGDITDQP---DVEAVVNAANAELMPGGGVAGAIHRAAGPGLAEEC------RP 58
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
PG+A IT G +LP HVIH +GPV+ E +L Y+N L + I +A
Sbjct: 59 LAPIRPGQAVITGGHRLPNRHVIHVLGPVYGQDRPEERLLADCYRNALRLAGERGISSLA 118
Query: 134 FPAISCG 140
FPA+S G
Sbjct: 119 FPAVSAG 125
>gi|410643986|ref|ZP_11354471.1| hypothetical protein GAGA_0005 [Glaciecola agarilytica NO2]
gi|410136438|dbj|GAC02870.1| hypothetical protein GAGA_0005 [Glaciecola agarilytica NO2]
Length = 174
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 69/127 (54%), Gaps = 5/127 (3%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T ++ GDI+ VD AIV+ L G AIH+AAGP L + C + +
Sbjct: 2 TEFEVILGDITGANVD----AIVNAAKPSLTGGSGVDGAIHKAAGPALLQECMAL-KPHD 56
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
+RCP GEARIT +L +IHTVGP++ NPE +L +Y N + + + IA
Sbjct: 57 GIRCPIGEARITGSGQLQCKFIIHTVGPIYKGCENPEALLTKSYTNSIELALNQKCKSIA 116
Query: 134 FPAISCG 140
FPAISCG
Sbjct: 117 FPAISCG 123
>gi|422340139|ref|ZP_16421093.1| appr-1-p processing enzyme domain protein [Fusobacterium nucleatum
subsp. polymorphum F0401]
gi|355370278|gb|EHG17664.1| appr-1-p processing enzyme domain protein [Fusobacterium nucleatum
subsp. polymorphum F0401]
Length = 175
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 72/132 (54%), Gaps = 10/132 (7%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K +K+ GDI++ +AIV+ N L +GG AI AAG +L K C +I
Sbjct: 3 KDIIKLVSGDITKIP---EVEAIVNAANNYLEMGGGVCGAIFRAAGTELIKECKEIG--- 56
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
C GEA IT G+ LP ++IHTVGP + N E + L+SAY L + K I+
Sbjct: 57 ---SCKTGEAVITKGYNLPNKYIIHTVGPRYTNGENGEAEKLKSAYYESLKLAKKKGIRK 113
Query: 132 IAFPAISCGVSQ 143
IAFP+IS G+ +
Sbjct: 114 IAFPSISTGIYR 125
>gi|315648210|ref|ZP_07901311.1| Appr-1-p processing domain protein [Paenibacillus vortex V453]
gi|315276856|gb|EFU40199.1| Appr-1-p processing domain protein [Paenibacillus vortex V453]
Length = 191
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 73/141 (51%), Gaps = 13/141 (9%)
Query: 2 TFKVQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDL 61
TFK+ +TS+ + GDI+ W + D IV+ N LL G AIH A GP++
Sbjct: 3 TFKI------GRTSVSVFIGDITTW----TGDIIVNAANSGLLGGKGVDGAIHSAGGPEI 52
Query: 62 QKACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNC 120
+ C +I + Q CPPG A IT LP H+IHTVGP++ E+ L Y+N
Sbjct: 53 MEQCMEIRKQQGG--CPPGNAVITGAGNLPAQHIIHTVGPIWEGGGRREEHTLAECYRNS 110
Query: 121 LSVGKANNIQYIAFPAISCGV 141
L + + IAFP IS G+
Sbjct: 111 LLLAIEVGARSIAFPNISTGI 131
>gi|188026108|ref|ZP_02960892.2| hypothetical protein PROSTU_02872 [Providencia stuartii ATCC 25827]
gi|188021641|gb|EDU59681.1| macro domain protein [Providencia stuartii ATCC 25827]
Length = 178
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 70/130 (53%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
+T +++ +GDI++ VD AIV+ N LL G AIH A G + C QI Q
Sbjct: 7 QTQIELQQGDITKTAVD----AIVNTANSALLGGSGVDGAIHRAGGSAILDECRQIRAKQ 62
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
C PG A IT KLP +VIHTVGPV+ + E IL +AY + L + I+
Sbjct: 63 GS--CKPGNAVITTAGKLPAKYVIHTVGPVWQDGIHEEAQILANAYLSSLRLASKYQIET 120
Query: 132 IAFPAISCGV 141
IAFP IS G+
Sbjct: 121 IAFPNISTGI 130
>gi|421604236|ref|ZP_16046465.1| hypothetical protein BCCGELA001_36937 [Bradyrhizobium sp.
CCGE-LA001]
gi|404263662|gb|EJZ29113.1| hypothetical protein BCCGELA001_36937 [Bradyrhizobium sp.
CCGE-LA001]
Length = 183
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 64/110 (58%), Gaps = 7/110 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAGP+L C + C G+A+IT G++L
Sbjct: 26 DAIVNAANTSLLGGGGVDGAIHRAAGPELVAECRMLHG------CKTGDAKITRGYRLKA 79
Query: 93 SHVIHTVGPVFNFHC-NPEDILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
+HVIHTVGPV+N +D+L S Y+ + + + + +AFPAIS G+
Sbjct: 80 AHVIHTVGPVWNGGTLGEDDLLASCYRRSIELCGKHELTSVAFPAISTGI 129
>gi|392398162|ref|YP_006434763.1| phosphatase, C-terminal domain of histone macro H2A1 like protein
[Flexibacter litoralis DSM 6794]
gi|390529240|gb|AFM04970.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Flexibacter litoralis DSM 6794]
Length = 182
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 71/130 (54%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
KT L + KGDI++ VD AIV+ N LL GG AIH A G ++ + C QI Q
Sbjct: 2 KTKLLLQKGDITKIAVD----AIVNAANTSLLGGGGVDGAIHRAGGKEILEECIQIRNRQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
C G+A T LP +VIHTVG V+ + E ++L S Y+N L + + I+
Sbjct: 58 G--GCKTGDAVYTNAGNLPAKYVIHTVGSVWQDGTHGERELLASCYQNSLQIAQELQIKS 115
Query: 132 IAFPAISCGV 141
I+FP IS G+
Sbjct: 116 ISFPNISTGI 125
>gi|365841921|ref|ZP_09382967.1| macro domain protein [Flavonifractor plautii ATCC 29863]
gi|364576699|gb|EHM54011.1| macro domain protein [Flavonifractor plautii ATCC 29863]
Length = 169
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 71/122 (58%), Gaps = 11/122 (9%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPG 80
GDI+R VD AIV+ N LL GG AIH AAGP+L C + C G
Sbjct: 9 GDITRIEVD----AIVNAANRTLLGGGGVDGAIHRAAGPELLAECRTLH------GCETG 58
Query: 81 EARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISC 139
+A+IT G+KLP +VIHT GP++ + E ++L S Y++ L++ + + +AFPAIS
Sbjct: 59 QAKITKGYKLPAKYVIHTPGPIWKGGGHGEAELLASCYRSSLTLAVEHGCRTVAFPAISA 118
Query: 140 GV 141
GV
Sbjct: 119 GV 120
>gi|310780001|ref|YP_003968333.1| Appr-1-p processing protein [Ilyobacter polytropus DSM 2926]
gi|309749324|gb|ADO83985.1| Appr-1-p processing domain protein [Ilyobacter polytropus DSM 2926]
Length = 175
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 71/123 (57%), Gaps = 7/123 (5%)
Query: 20 KGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPP 79
KGDI+ VD A+V+ N +L GG AIH+A GP + K C +I C
Sbjct: 9 KGDIATLKVD----AVVNAANNMLAGGGGVDGAIHKAGGPLIAKYCSEIRRETGG--CKT 62
Query: 80 GEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAIS 138
GEA +T G LP ++IHTVGPV+ E++L++ Y+N L + K ++++ IAFP IS
Sbjct: 63 GEAVLTLGGNLPSKYIIHTVGPVWKGGKFREEELLKNCYRNSLMLAKEHHMKSIAFPNIS 122
Query: 139 CGV 141
GV
Sbjct: 123 TGV 125
>gi|182434995|ref|YP_001822714.1| hypothetical protein SGR_1202 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326775511|ref|ZP_08234776.1| Appr-1-p processing domain protein [Streptomyces griseus XylebKG-1]
gi|178463511|dbj|BAG18031.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326655844|gb|EGE40690.1| Appr-1-p processing domain protein [Streptomyces griseus XylebKG-1]
Length = 177
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 71/134 (52%), Gaps = 4/134 (2%)
Query: 8 LSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQ 67
+S S ++++ +GDI+ D+S D IV+ N LL GG AIH GPD+ AC +
Sbjct: 1 MSTSVSPAVRLVRGDIT----DQSVDVIVNAANSSLLGGGGVDGAIHRRGGPDILAACRE 56
Query: 68 IPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKAN 127
+ A P G+A T +L ++HTVGPVF+ + +L S Y+ L +
Sbjct: 57 LRAAHYGKGLPTGQAVATTAGRLDARWIVHTVGPVFSGAQDRSALLASCYRESLRLAAEL 116
Query: 128 NIQYIAFPAISCGV 141
+ IAFPAIS G+
Sbjct: 117 GARSIAFPAISTGI 130
>gi|392941210|ref|ZP_10306854.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Thermoanaerobacter siderophilus SR4]
gi|392292960|gb|EIW01404.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Thermoanaerobacter siderophilus SR4]
Length = 174
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 70/129 (54%), Gaps = 7/129 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K +K+ KG+I VD+ DAIV+ N L GG AIH A GP + + C I E Q
Sbjct: 2 KERIKLIKGNI----VDQEVDAIVNAANSSLSGGGGVDGAIHRAGGPSIAEECRIIREKQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQY 131
CP G A IT L +VIH VGP++ + N +++L SAY L + N++
Sbjct: 58 G--GCPTGHAVITGAGNLKAKYVIHAVGPIWRGGNHNEDNLLASAYIESLKLADEYNVKT 115
Query: 132 IAFPAISCG 140
IAFP+IS G
Sbjct: 116 IAFPSISTG 124
>gi|424836257|ref|ZP_18260910.1| RNase III inhibitor [Clostridium sporogenes PA 3679]
gi|365977210|gb|EHN13311.1| RNase III inhibitor [Clostridium sporogenes PA 3679]
Length = 180
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 72/135 (53%), Gaps = 7/135 (5%)
Query: 8 LSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQ 67
++ S +KI KGDI++ VD AIV+ N LL GG AIH A G + + C
Sbjct: 1 MAISYINKIKIIKGDITKENVD----AIVNAANSSLLGGGGVDGAIHRAGGNKILQECKI 56
Query: 68 IPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNF-HCNPEDILRSAYKNCLSVGKA 126
I + GE IT G L +VIHTVGP+++ N E +L +AYKN L +
Sbjct: 57 IVSKIGSLNT--GEVVITSGGNLNAKYVIHTVGPIWHGGKSNEETLLANAYKNSLKLASE 114
Query: 127 NNIQYIAFPAISCGV 141
N++ +AFP IS GV
Sbjct: 115 KNVKTVAFPNISTGV 129
>gi|403515922|ref|YP_006656742.1| appr-1-p processing domain-containing protein [Lactobacillus
helveticus R0052]
gi|417011656|ref|ZP_11946280.1| appr-1-p processing domain protein [Lactobacillus helveticus MTCC
5463]
gi|328464151|gb|EGF35618.1| appr-1-p processing domain protein [Lactobacillus helveticus MTCC
5463]
gi|403081360|gb|AFR22938.1| appr-1-p processing domain protein [Lactobacillus helveticus R0052]
Length = 102
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 63/108 (58%), Gaps = 12/108 (11%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T +KI +GDI++ +DAIV+ N LL G AIH AAGP LQ+ C +
Sbjct: 4 TKIKIIQGDITKM----KADAIVNAANNSLL--GGVDGAIHAAAGPHLQEECMTL----- 52
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCL 121
CP GEARIT G+KLP +VIHTVGPV++ + +L S Y N L
Sbjct: 53 -YGCPTGEARITRGYKLPAKYVIHTVGPVYSGDSSDAHMLASCYYNSL 99
>gi|38505728|ref|NP_942348.1| hypothetical protein slr7060 [Synechocystis sp. PCC 6803]
gi|451816731|ref|YP_007452998.1| hypothetical protein MYO_4580 [Synechocystis sp. PCC 6803]
gi|38423752|dbj|BAD01962.1| slr7060 [Synechocystis sp. PCC 6803]
gi|451782649|gb|AGF53614.1| hypothetical protein MYO_4580 [Synechocystis sp. PCC 6803]
Length = 588
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 81/144 (56%), Gaps = 14/144 (9%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPG 80
GDI++ ++AIV+ T+ L G + AIH+AAGP+L +AC Q C G
Sbjct: 425 GDITK----EKAEAIVNSTDRNLSNSGALSRAIHQAAGPELLQAC------QDLQGCTVG 474
Query: 81 EARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISC 139
A++TPGF L + VIHTV P + + E++L S Y+NCL + + +I+ +AFPAI+C
Sbjct: 475 GAKLTPGFNLRANWVIHTVAPKWKGGNQGEEELLVSCYQNCLQLAVSQSIRSLAFPAIAC 534
Query: 140 GVSQI---MTHAIKLQTNCGFLES 160
G + I L+T FL S
Sbjct: 535 GAMGFPPEIAARIALETVSNFLLS 558
>gi|399022595|ref|ZP_10724667.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Chryseobacterium sp. CF314]
gi|398084431|gb|EJL75116.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Chryseobacterium sp. CF314]
Length = 173
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K +++ K DI++ +DAIV+ N LL GG AIH A G + + C +I Q
Sbjct: 2 KLDIELIKADITKI----KADAIVNAANPSLLGGGGVDGAIHRAGGKQILEECIEIRNRQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNF-HCNPEDILRSAYKNCLSVGKANNIQY 131
+ C GEA IT LP +VIHTVGPV+N ++L + YKN L + ++ N++
Sbjct: 58 GK--CKTGEAVITSAGNLPAKYVIHTVGPVWNGDEKKGSELLANCYKNSLKLAESMNVKI 115
Query: 132 IAFPAISCGV 141
IA P IS G+
Sbjct: 116 IAIPNISTGI 125
>gi|189218152|ref|YP_001938794.1| phosphatase, Macro/Appr-1 family [Methylacidiphilum infernorum V4]
gi|189185010|gb|ACD82195.1| Predicted phosphatase, Macro/Appr-1 family [Methylacidiphilum
infernorum V4]
Length = 193
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 68/126 (53%), Gaps = 11/126 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ +GDI++ VD A+V+ N L+ GG AIH AAGP L +AC Q+
Sbjct: 12 IELVQGDITKLKVD----AVVNAANTRLVKGGGVDGAIHRAAGPKLAEACAQLK------ 61
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
CP G+A++TPGF L +IH VGPV+ E++L S Y L +AF
Sbjct: 62 GCPTGQAKVTPGFNLQAKWIIHAVGPVWQGGQAKEEELLASCYHQALLRAHELGAHSVAF 121
Query: 135 PAISCG 140
PAIS G
Sbjct: 122 PAISTG 127
>gi|260495772|ref|ZP_05815894.1| ATPase [Fusobacterium sp. 3_1_33]
gi|423137626|ref|ZP_17125269.1| UPF0189 protein [Fusobacterium nucleatum subsp. animalis F0419]
gi|260196730|gb|EEW94255.1| ATPase [Fusobacterium sp. 3_1_33]
gi|371959654|gb|EHO77334.1| UPF0189 protein [Fusobacterium nucleatum subsp. animalis F0419]
Length = 175
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 78/152 (51%), Gaps = 13/152 (8%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K +K+ GDI++ +AIV+ N L +GG AI AAG DL K C +I
Sbjct: 3 KDIIKLVSGDITKVP---EVEAIVNAANTSLEMGGGVCGAIFRAAGNDLTKECKEIG--- 56
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
C GEA IT G+ LP ++IHTVGP ++ N E + L SAY L + K I+
Sbjct: 57 ---GCNTGEAVITKGYNLPNKYIIHTVGPRYSTGENGEAERLTSAYYESLKLAKKKGIRK 113
Query: 132 IAFPAISCGVSQIMTH---AIKLQTNCGFLES 160
IAFP+IS G+ + I L T FL+
Sbjct: 114 IAFPSISTGIYRFPVDEGAEIALNTAIKFLDE 145
>gi|170099063|ref|XP_001880750.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644275|gb|EDR08525.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 230
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 75/125 (60%), Gaps = 14/125 (11%)
Query: 20 KGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPP 79
+G+I+R +D +IV+ N+ LL GG AIH AAGP L C + C
Sbjct: 62 QGNITRLGLD----SIVNAANKSLLGGGGVDGAIHTAAGPKLVDECRGLN------GCLT 111
Query: 80 GEARITPGFKLPVSHVIHTVGPVFNFHCNPED---ILRSAYKNCLSVGKANNIQYIAFPA 136
G+++IT G+ LP +HVIHTVGP+++ N ED +L S Y+ L + +++++IAFP+
Sbjct: 112 GQSKITRGYDLPAAHVIHTVGPIYSSE-NEEDSAELLASCYRTSLQLAVDHSLRHIAFPS 170
Query: 137 ISCGV 141
IS G+
Sbjct: 171 ISTGI 175
>gi|242213612|ref|XP_002472633.1| predicted protein [Postia placenta Mad-698-R]
gi|220728231|gb|EED82129.1| predicted protein [Postia placenta Mad-698-R]
Length = 203
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 72/129 (55%), Gaps = 14/129 (10%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ + +GDI+ +D AIV+ N LL GG AIH AAGP L + C +
Sbjct: 33 VSLYQGDITNLEID----AIVNAANRSLLGGGGVDGAIHAAAGPKLLEECRTLN------ 82
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF---NFHCNPEDILRSAYKNCLSVGKANNIQYI 132
C G+A+IT ++LP HVIHTVGP++ N E LRS Y L + N+++++
Sbjct: 83 GCETGDAKITRAYELPSKHVIHTVGPIYSSRNVDLKAEQ-LRSCYHISLQLAIENSLKHV 141
Query: 133 AFPAISCGV 141
AFP+IS G+
Sbjct: 142 AFPSISTGI 150
>gi|242024114|ref|XP_002432475.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212517908|gb|EEB19737.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 367
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 75/142 (52%), Gaps = 16/142 (11%)
Query: 2 TFKVQTLSFSTKTSLKIS--KGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGP 59
T+ V+ + + + +IS KGDI+ VD AIV+ N LL GG AIH AG
Sbjct: 44 TYNVKPHTCNPDMNDRISLWKGDITTLGVD----AIVNAANSSLLGGGGVDGAIHRKAGK 99
Query: 60 DLQKACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKN 119
L + C + CP G A+IT G+ LP +VIHTVGP D+L S YK+
Sbjct: 100 FLLEECKTLN------GCPTGSAKITGGYNLPSKYVIHTVGP----QGEKPDLLESCYKS 149
Query: 120 CLSVGKANNIQYIAFPAISCGV 141
C + NN++ IAFP IS G+
Sbjct: 150 CFHLMLDNNLESIAFPCISTGI 171
>gi|408374836|ref|ZP_11172517.1| Appr-1-p processing protein [Alcanivorax hongdengensis A-11-3]
gi|407765246|gb|EKF73702.1| Appr-1-p processing protein [Alcanivorax hongdengensis A-11-3]
Length = 181
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+L+ +GDI+R DA+V+ N L GG A AIH AAGP L + C + QP
Sbjct: 10 TLETVQGDITRQ---DDLDAVVNAANARLRPGGGVAGAIHRAAGPGLARECEALAPIQP- 65
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
G+A IT G LP HVIH +GPV+ + +L + Y+ L + + I F
Sbjct: 66 -----GQAVITAGHDLPNRHVIHCLGPVYGLDEPADQLLAACYRRALQLADEAGLTSIGF 120
Query: 135 PAISCGV 141
PAIS GV
Sbjct: 121 PAISTGV 127
>gi|386741647|ref|YP_006214826.1| Appr-1-p processing protein [Providencia stuartii MRSN 2154]
gi|384478340|gb|AFH92135.1| Appr-1-p processing domain-containing protein [Providencia stuartii
MRSN 2154]
Length = 174
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 70/130 (53%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
+T +++ +GDI++ VD AIV+ N LL G AIH A G + C QI Q
Sbjct: 2 QTQIELQQGDITKTAVD----AIVNTANRALLGGSGVDGAIHRAGGSAILDECRQIRAKQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
C PG A IT KLP +VIHTVGPV+ + E IL +AY + L + I+
Sbjct: 58 GS--CKPGNAVITTAGKLPAKYVIHTVGPVWQDGTHEEAQILANAYLSSLRLASKYQIET 115
Query: 132 IAFPAISCGV 141
IAFP IS G+
Sbjct: 116 IAFPNISTGI 125
>gi|258545180|ref|ZP_05705414.1| RNase III regulator YmdB [Cardiobacterium hominis ATCC 15826]
gi|258519605|gb|EEV88464.1| RNase III regulator YmdB [Cardiobacterium hominis ATCC 15826]
Length = 165
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 72/128 (56%), Gaps = 11/128 (8%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+L++ DI+ VD AIV+ NE LL G AIH AAG +L C +
Sbjct: 2 NLEVQVADITTLAVD----AIVNAANESLLGGSGVDGAIHRAAGKELVAECRTLGG---- 53
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIA 133
C GEA++T G++LP VIHTVGPV+ + E + L +AY N L + +A+ + IA
Sbjct: 54 --CKVGEAKLTRGYRLPARFVIHTVGPVWYGGDDGEAEALANAYANSLRLAEAHELTSIA 111
Query: 134 FPAISCGV 141
FPAIS GV
Sbjct: 112 FPAISTGV 119
>gi|397478597|ref|XP_003810629.1| PREDICTED: O-acetyl-ADP-ribose deacetylase MACROD2 isoform 1 [Pan
paniscus]
Length = 448
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 73/135 (54%), Gaps = 14/135 (10%)
Query: 9 SFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQI 68
S + K SL +GDI+ VD AIV+ N LL GG IH AAGP L C +
Sbjct: 67 SLTEKVSL--YRGDITLLEVD----AIVNAANASLLGGGGVDGCIHRAAGPCLLAECRNL 120
Query: 69 PEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNP--EDILRSAYKNCLSVGKA 126
C G A+IT G+ LP +VIHTVGP+ H N ++ L + YK+ L + K
Sbjct: 121 N------GCDTGHAKITCGYDLPAKYVIHTVGPIARGHINGSHKEDLANCYKSSLKLVKE 174
Query: 127 NNIQYIAFPAISCGV 141
NNI+ +AFP IS G+
Sbjct: 175 NNIRSVAFPCISTGI 189
>gi|302845919|ref|XP_002954497.1| hypothetical protein VOLCADRAFT_106437 [Volvox carteri f.
nagariensis]
gi|300260169|gb|EFJ44390.1| hypothetical protein VOLCADRAFT_106437 [Volvox carteri f.
nagariensis]
Length = 232
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 64/112 (57%), Gaps = 6/112 (5%)
Query: 34 AIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPVS 93
A+V+ N+ L GG IH AGP+L K C PE +P +RCP GEA +T G+
Sbjct: 48 AVVNAANQRLCGGGGVDGMIHSKAGPELAKECLSKPEVRPGIRCPTGEAVVTKGYNFKTD 107
Query: 94 HVIHTVGPVF----NFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
++IHT GPV+ + C E+ L +AY+N L + ++ +AF AIS GV
Sbjct: 108 YIIHTCGPVYAKERDQEC--EEHLTNAYRNSLLKAQDLGVRCVAFAAISTGV 157
>gi|380809810|gb|AFE76780.1| MACRO domain-containing protein 2 isoform 1 [Macaca mulatta]
Length = 448
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 73/135 (54%), Gaps = 14/135 (10%)
Query: 9 SFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQI 68
S + K SL +GDI+ VD AIV+ N LL GG IH AAGP L C +
Sbjct: 67 SLTEKVSL--YRGDITLLEVD----AIVNAANASLLGGGGVDGCIHRAAGPCLLAECRNL 120
Query: 69 PEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNP--EDILRSAYKNCLSVGKA 126
C G A+IT G+ LP +VIHTVGP+ H N ++ L + YK+ L + K
Sbjct: 121 N------GCDTGHAKITCGYDLPAKYVIHTVGPIARGHINGSHKEDLANCYKSSLKLVKE 174
Query: 127 NNIQYIAFPAISCGV 141
NNI+ +AFP IS G+
Sbjct: 175 NNIRSVAFPCISTGI 189
>gi|158514034|sp|A1Z1Q3.1|MACD2_HUMAN RecName: Full=O-acetyl-ADP-ribose deacetylase MACROD2; AltName:
Full=MACRO domain-containing protein 2
gi|121044640|gb|ABM46908.1| unknown [Homo sapiens]
Length = 448
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 73/135 (54%), Gaps = 14/135 (10%)
Query: 9 SFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQI 68
S + K SL +GDI+ VD AIV+ N LL GG IH AAGP L C +
Sbjct: 67 SLTEKVSL--YRGDITLLEVD----AIVNAANASLLGGGGVDGCIHRAAGPCLLAECRNL 120
Query: 69 PEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNP--EDILRSAYKNCLSVGKA 126
C G A+IT G+ LP +VIHTVGP+ H N ++ L + YK+ L + K
Sbjct: 121 N------GCDTGHAKITCGYDLPAKYVIHTVGPIARGHINGSHKEDLANCYKSSLKLVKE 174
Query: 127 NNIQYIAFPAISCGV 141
NNI+ +AFP IS G+
Sbjct: 175 NNIRSVAFPCISTGI 189
>gi|398781173|ref|ZP_10545322.1| RNase III inhibitor [Streptomyces auratus AGR0001]
gi|396997625|gb|EJJ08579.1| RNase III inhibitor [Streptomyces auratus AGR0001]
Length = 181
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 11 STKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPE 70
++ TSL + +GDI+ VD A+V+ N LL GG AIH GP++ C + +
Sbjct: 3 TSHTSLTLVQGDITEQAVD----AVVNAANSSLLGGGGVDGAIHRRGGPEILAECRALRD 58
Query: 71 AQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQ 130
P G+A T +LP V+HTVGPV+ + D+L S Y+ L V +
Sbjct: 59 GHYGGGLPTGQAVATTAGRLPARWVVHTVGPVYAKSEDRSDLLASCYRESLQVAGELGAR 118
Query: 131 YIAFPAISCGV 141
+AFPAIS G+
Sbjct: 119 TVAFPAISTGI 129
>gi|297260312|ref|XP_001084015.2| PREDICTED: MACRO domain-containing protein 2-like isoform 1 [Macaca
mulatta]
Length = 425
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 73/135 (54%), Gaps = 14/135 (10%)
Query: 9 SFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQI 68
S + K SL +GDI+ VD AIV+ N LL GG IH AAGP L C +
Sbjct: 67 SLTEKVSL--YRGDITLLEVD----AIVNAANASLLGGGGVDGCIHRAAGPCLLAECRNL 120
Query: 69 PEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNP--EDILRSAYKNCLSVGKA 126
C G A+IT G+ LP +VIHTVGP+ H N ++ L + YK+ L + K
Sbjct: 121 N------GCDTGHAKITCGYDLPAKYVIHTVGPIARGHINGSHKEDLANCYKSSLKLVKE 174
Query: 127 NNIQYIAFPAISCGV 141
NNI+ +AFP IS G+
Sbjct: 175 NNIRSVAFPCISTGI 189
>gi|117968621|ref|NP_542407.2| O-acetyl-ADP-ribose deacetylase MACROD2 isoform 1 [Homo sapiens]
Length = 425
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 73/135 (54%), Gaps = 14/135 (10%)
Query: 9 SFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQI 68
S + K SL +GDI+ VD AIV+ N LL GG IH AAGP L C +
Sbjct: 67 SLTEKVSL--YRGDITLLEVD----AIVNAANASLLGGGGVDGCIHRAAGPCLLAECRNL 120
Query: 69 PEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNP--EDILRSAYKNCLSVGKA 126
C G A+IT G+ LP +VIHTVGP+ H N ++ L + YK+ L + K
Sbjct: 121 N------GCDTGHAKITCGYDLPAKYVIHTVGPIARGHINGSHKEDLANCYKSSLKLVKE 174
Query: 127 NNIQYIAFPAISCGV 141
NNI+ +AFP IS G+
Sbjct: 175 NNIRSVAFPCISTGI 189
>gi|344279372|ref|XP_003411462.1| PREDICTED: MACRO domain-containing protein 2-like [Loxodonta
africana]
Length = 472
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 73/135 (54%), Gaps = 14/135 (10%)
Query: 9 SFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQI 68
S S K SL +GDI+ +D AIV+ N LL GG IH AAGP L C +
Sbjct: 113 SLSEKVSL--YRGDITLLEID----AIVNAANGSLLGGGGVDGCIHRAAGPCLLAECRNL 166
Query: 69 PEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNP--EDILRSAYKNCLSVGKA 126
C G A+IT G+ LP +VIHTVGP+ H N ++ L + YK+ L + K
Sbjct: 167 N------GCDTGHAKITCGYDLPAKYVIHTVGPIARGHINGSHKEDLANCYKSSLRLVKE 220
Query: 127 NNIQYIAFPAISCGV 141
NNI+ +AFP IS G+
Sbjct: 221 NNIRSVAFPCISTGI 235
>gi|302388020|ref|YP_003823842.1| Appr-1-p processing protein [Clostridium saccharolyticum WM1]
gi|302198648|gb|ADL06219.1| Appr-1-p processing domain protein [Clostridium saccharolyticum
WM1]
Length = 338
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 70/127 (55%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L+I + DI++ VD AIV+ N LL GG IH AAGP+L C +
Sbjct: 3 LQIIRNDITKMSVD----AIVNAANTSLLGGGGVDGCIHRAAGPELLAECSTLH------ 52
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C G A+IT G++LP +VIH VGP + + +++L S Y+ L++ K N Q +AF
Sbjct: 53 GCETGSAKITKGYRLPCKYVIHAVGPRWRDGKHREQELLESCYRTSLNLAKENGCQSVAF 112
Query: 135 PAISCGV 141
P IS G+
Sbjct: 113 PLISSGI 119
>gi|333918717|ref|YP_004492298.1| RNase III regulator YmdB [Amycolicicoccus subflavus DQS3-9A1]
gi|333480938|gb|AEF39498.1| RNase III regulator YmdB [Amycolicicoccus subflavus DQS3-9A1]
Length = 173
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 67/125 (53%), Gaps = 4/125 (3%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++I +GDI++ +DAIV+ N LL GG AIH A GP + + C +I
Sbjct: 3 IEIYQGDITQ----AETDAIVNAANSSLLGGGGVDGAIHRAGGPAILRDCQEIRATTFPS 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFP 135
PPG+A T L VIHTVGPV++ + DILRSAY + L V + IAFP
Sbjct: 59 GLPPGKAIATTAGDLSARWVIHTVGPVYSASEDRSDILRSAYLSSLDVASGLGARSIAFP 118
Query: 136 AISCG 140
IS G
Sbjct: 119 LISAG 123
>gi|332206127|ref|XP_003252141.1| PREDICTED: O-acetyl-ADP-ribose deacetylase MACROD2 isoform 1
[Nomascus leucogenys]
Length = 425
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 73/135 (54%), Gaps = 14/135 (10%)
Query: 9 SFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQI 68
S + K SL +GDI+ VD AIV+ N LL GG IH AAGP L C +
Sbjct: 67 SLTEKVSL--YRGDITLLEVD----AIVNAANASLLGGGGVDGCIHRAAGPCLLAECRNL 120
Query: 69 PEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNP--EDILRSAYKNCLSVGKA 126
C G A+IT G+ LP +VIHTVGP+ H N ++ L + YK+ L + K
Sbjct: 121 N------GCDTGHAKITCGYDLPAKYVIHTVGPIARGHINGSHKEDLANCYKSSLKLVKE 174
Query: 127 NNIQYIAFPAISCGV 141
NNI+ +AFP IS G+
Sbjct: 175 NNIRSVAFPCISTGI 189
>gi|440781207|ref|ZP_20959549.1| Appr-1-p processing protein [Clostridium pasteurianum DSM 525]
gi|440220812|gb|ELP60018.1| Appr-1-p processing protein [Clostridium pasteurianum DSM 525]
Length = 182
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 81/152 (53%), Gaps = 11/152 (7%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAG-PDLQKACYQIPEAQ 72
+ ++I KGDI++ V+ AIV+ N L GG AIH AAG +L + C +I E +
Sbjct: 8 SKIEIIKGDITKIQVE----AIVNAANSRLAGGGGVDGAIHRAAGGEELHRECIKIIEEK 63
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQY 131
CPPG+ IT KL ++IHTVGP++ + N E+ L Y N L + N I+
Sbjct: 64 GN--CPPGKVAITSAGKLKAKYIIHTVGPIWRGGNNNEEETLSQCYWNTLKLAIENKIKT 121
Query: 132 IAFPAISCGVS---QIMTHAIKLQTNCGFLES 160
IAFP IS G+ ++ I L T F+E
Sbjct: 122 IAFPNISTGIYGFPKLPAAKIALNTVSKFVEE 153
>gi|73541111|ref|YP_295631.1| Appr-1-p processing [Ralstonia eutropha JMP134]
gi|72118524|gb|AAZ60787.1| Appr-1-p processing [Ralstonia eutropha JMP134]
Length = 173
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 75/131 (57%), Gaps = 7/131 (5%)
Query: 12 TKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEA 71
T L++ GDI+R VD A+V+ N LL GG AIH A GP + AC I +A
Sbjct: 2 TGEHLQVVHGDITRMEVD----AVVNAANSGLLGGGGVDGAIHGAGGPAIMAACKAIRDA 57
Query: 72 QPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQ 130
Q CP GEA IT G LP +VIH VGPV++ ED L SAY+N + + ++++
Sbjct: 58 QGG--CPTGEAVITTGGLLPAPYVIHAVGPVWHGGSRDEDQQLASAYRNSIRLAAEHHLR 115
Query: 131 YIAFPAISCGV 141
+AFP IS G+
Sbjct: 116 TVAFPNISTGI 126
>gi|325681189|ref|ZP_08160719.1| macro domain protein [Ruminococcus albus 8]
gi|324107111|gb|EGC01397.1| macro domain protein [Ruminococcus albus 8]
Length = 347
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 64/111 (57%), Gaps = 7/111 (6%)
Query: 32 SDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLP 91
+DAIV+ N LL GG AIH AAG +L + C + C G A+ T G++L
Sbjct: 15 ADAIVNAANNSLLGGGGVDGAIHRAAGAELLEECRTLGG------CETGHAKATAGYRLD 68
Query: 92 VSHVIHTVGPVFNF-HCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
H+IHT GPV+ + E++LRS Y+N L++ K+ + IAFP IS G+
Sbjct: 69 CRHIIHTAGPVWRGGNDGEEELLRSCYRNSLALAKSLGCESIAFPLISAGI 119
>gi|114681066|ref|XP_001136712.1| PREDICTED: O-acetyl-ADP-ribose deacetylase MACROD2 isoform 3 [Pan
troglodytes]
Length = 425
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 73/135 (54%), Gaps = 14/135 (10%)
Query: 9 SFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQI 68
S + K SL +GDI+ VD AIV+ N LL GG IH AAGP L C +
Sbjct: 67 SLTEKVSL--YRGDITLLEVD----AIVNAANASLLGGGGVDGCIHRAAGPCLLAECRNL 120
Query: 69 PEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNP--EDILRSAYKNCLSVGKA 126
C G A+IT G+ LP +VIHTVGP+ H N ++ L + YK+ L + K
Sbjct: 121 N------GCDTGHAKITCGYDLPAKYVIHTVGPIARGHINGSHKEDLANCYKSSLKLVKE 174
Query: 127 NNIQYIAFPAISCGV 141
NNI+ +AFP IS G+
Sbjct: 175 NNIRSVAFPCISTGI 189
>gi|313672176|ref|YP_004050287.1| appr-1-p processing domain-containing protein [Calditerrivibrio
nitroreducens DSM 19672]
gi|312938932|gb|ADR18124.1| Appr-1-p processing domain protein [Calditerrivibrio nitroreducens
DSM 19672]
Length = 173
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 80/152 (52%), Gaps = 22/152 (14%)
Query: 20 KGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPP 79
KGDI+ +DAIV+P N L LGG A AI + G +Q C +I CP
Sbjct: 10 KGDITELF----TDAIVNPANSSLKLGGGVAGAIAKKGGKQIQDECDKIG------HCPV 59
Query: 80 GEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAFPAIS 138
GEA IT G L +VIH VGP + NP D +L +A N L + + N ++ IA PAIS
Sbjct: 60 GEAVITSGGNLKAKYVIHAVGPRYKID-NPSDKLLYNAVFNALKLAENNKLKSIALPAIS 118
Query: 139 CGV--------SQIMTHAIK--LQTNCGFLES 160
G+ ++I+T AI+ + TN ++E
Sbjct: 119 TGIFGYPKKEAAEIITRAIRDFINTNPQYVED 150
>gi|365844049|ref|ZP_09384918.1| macro domain protein [Flavonifractor plautii ATCC 29863]
gi|364566507|gb|EHM44193.1| macro domain protein [Flavonifractor plautii ATCC 29863]
Length = 332
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 71/127 (55%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L I + DI+ VD AIV+ E LL GG AIH AAG +L C +
Sbjct: 3 LHIVRNDITTMKVD----AIVNAAKESLLGGGGVDGAIHRAAGLELLAECRTLGG----- 53
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
C G+A+IT G++LP VIHTVGP++ + E ++L SAY++ L V A+ + +AF
Sbjct: 54 -CKTGQAKITKGYRLPAKFVIHTVGPIWQGGSHSERELLVSAYRSSLEVALAHQCETVAF 112
Query: 135 PAISCGV 141
P IS GV
Sbjct: 113 PLISSGV 119
>gi|422932806|ref|ZP_16965731.1| appr-1-p processing enzyme domain protein [Fusobacterium nucleatum
subsp. animalis ATCC 51191]
gi|339892065|gb|EGQ80961.1| appr-1-p processing enzyme domain protein [Fusobacterium nucleatum
subsp. animalis ATCC 51191]
Length = 175
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 78/152 (51%), Gaps = 13/152 (8%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K +K+ GDI++ +AIV+ N L +GG AI AAG DL K C +I
Sbjct: 3 KDIIKLVSGDITKIP---EVEAIVNAANTSLEMGGGVCGAIFRAAGNDLTKECKEIG--- 56
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
C GEA IT G+ LP ++IHTVGP ++ N E + L SAY L + K I+
Sbjct: 57 ---GCNTGEAVITKGYNLPNKYIIHTVGPRYSTGENGEAERLASAYYKSLKLAKKKGIRK 113
Query: 132 IAFPAISCGVSQIMTH---AIKLQTNCGFLES 160
IAFP+IS G+ + I L T FL+
Sbjct: 114 IAFPSISTGIYRFPVDEGAEIALNTAIKFLDE 145
>gi|420248631|ref|ZP_14751952.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Burkholderia sp. BT03]
gi|398067457|gb|EJL58966.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Burkholderia sp. BT03]
Length = 183
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 63/110 (57%), Gaps = 7/110 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAGPDL + C + C G+A+IT G +L
Sbjct: 22 DAIVNAANTSLLGGGGVDGAIHRAAGPDLLRECETLGG------CVTGDAKITGGHRLKA 75
Query: 93 SHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
HVIH VGPV++ E ++L + Y+ L + + + IAFPAISCGV
Sbjct: 76 RHVIHAVGPVWHGGERGEAELLAACYRRSLELARDAKAKGIAFPAISCGV 125
>gi|225851182|ref|YP_002731416.1| appr-1-p processing domain protein [Persephonella marina EX-H1]
gi|225645660|gb|ACO03846.1| appr-1-p processing domain protein [Persephonella marina EX-H1]
Length = 187
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 78/150 (52%), Gaps = 10/150 (6%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L I KGDI+ + ++AIV+ N L+ GG AIH GP + + C +I E +
Sbjct: 12 LVIKKGDIT----EEDTEAIVNAANSSLMGGGGVDGAIHSKGGPVILEECKKIRETEYPE 67
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED---ILRSAYKNCLSVGKANNIQYI 132
P G+A IT G L +VIHTVGPV + ED +L+ AY N L + I+ I
Sbjct: 68 GLPTGKAVITSGGNLKARYVIHTVGPVCSSGKLTEDKARLLKDAYYNSLRLASERGIKTI 127
Query: 133 AFPAISCGVSQI---MTHAIKLQTNCGFLE 159
AFP+IS G + + I L+T FL+
Sbjct: 128 AFPSISTGAYRCPVEESSKIALKTAIDFLK 157
>gi|269976944|ref|ZP_06183918.1| macro domain protein [Mobiluncus mulieris 28-1]
gi|269934775|gb|EEZ91335.1| macro domain protein [Mobiluncus mulieris 28-1]
Length = 249
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 65/123 (52%), Gaps = 8/123 (6%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPG 80
GDI+R VD AIV+ N LL GG AIH AAG +L AC I + P G
Sbjct: 8 GDITRVHVD----AIVNAANSTLLGGGGVDGAIHRAAGSELLAACRVIRATRYPDGLPVG 63
Query: 81 EARITPGFKLPVSHVIHTVGPVFNFHCNPED--ILRSAYKNCLSVGKANNIQYIAFPAIS 138
+A T GFKLP VIHTVGP N H D +LR+A+ N L +AFPAIS
Sbjct: 64 QAVATKGFKLPAKWVIHTVGP--NRHAGQTDPGLLRAAFVNSLREAARVGAHSVAFPAIS 121
Query: 139 CGV 141
GV
Sbjct: 122 GGV 124
>gi|306822568|ref|ZP_07455946.1| RNase III regulator YmdB [Bifidobacterium dentium ATCC 27679]
gi|309801004|ref|ZP_07695136.1| macro domain protein [Bifidobacterium dentium JCVIHMP022]
gi|304554113|gb|EFM42022.1| RNase III regulator YmdB [Bifidobacterium dentium ATCC 27679]
gi|308222540|gb|EFO78820.1| macro domain protein [Bifidobacterium dentium JCVIHMP022]
Length = 155
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 67/111 (60%), Gaps = 8/111 (7%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPD-LQKACYQIPEAQPRVRCPPGEARITPGFKLP 91
DAIV+ N L++GG AI AAG + +Q AC ++ + GEA ITPG LP
Sbjct: 16 DAIVNAANTDLMMGGGVCGAIFRAAGANRMQTACNRLSPIRT------GEAAITPGIDLP 69
Query: 92 VSHVIHTVGPVFNF-HCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
+VIHT GPV++ + E +LR+ Y+NCL++ +N + IAFP IS G+
Sbjct: 70 AKYVIHTAGPVWHGGDHDEEQLLRACYRNCLAIASVHNCKSIAFPLISAGI 120
>gi|291562365|emb|CBL41181.1| Predicted phosphatase homologous to the C-terminal domain of
histone macroH2A1 [butyrate-producing bacterium SS3/4]
Length = 155
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 70/127 (55%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L+I + DI++ VD AIV+ N LL GG IH AAGP+L C +
Sbjct: 3 LQIIRNDITKMSVD----AIVNAANTSLLGGGGVDGCIHRAAGPELLAECSTLHG----- 53
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C G A+IT G++LP +VIH VGP + + +++L S Y+ L++ K N Q +AF
Sbjct: 54 -CETGNAKITKGYRLPCKYVIHAVGPRWRDGKHREQELLESCYRTSLNLAKENGCQSVAF 112
Query: 135 PAISCGV 141
P IS G+
Sbjct: 113 PLISSGI 119
>gi|168179935|ref|ZP_02614599.1| putative phosphatase [Clostridium botulinum NCTC 2916]
gi|226949519|ref|YP_002804610.1| hypothetical protein CLM_2454 [Clostridium botulinum A2 str. Kyoto]
gi|182669184|gb|EDT81160.1| putative phosphatase [Clostridium botulinum NCTC 2916]
gi|226844164|gb|ACO86830.1| putative phosphatase [Clostridium botulinum A2 str. Kyoto]
Length = 180
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 74/136 (54%), Gaps = 9/136 (6%)
Query: 7 TLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACY 66
T+S+ K +KI K DI++ VD AIV+ N LL G AIH A G + + C
Sbjct: 2 TISYINK--IKIVKSDITKENVD----AIVNAANSSLLGGSGVDGAIHRAGGNKILEECK 55
Query: 67 QIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNF-HCNPEDILRSAYKNCLSVGK 125
I +R GEA IT G L +VIHTVGP+++ N E +L ++YKN L +
Sbjct: 56 SIVSKIGPLRT--GEAVITSGGNLKAKYVIHTVGPIWHGGKSNEETLLANSYKNSLKLAA 113
Query: 126 ANNIQYIAFPAISCGV 141
NI+ IAFP IS GV
Sbjct: 114 EKNIKTIAFPNISTGV 129
>gi|323524634|ref|YP_004226787.1| Appr-1-p processing domain-containing protein [Burkholderia sp.
CCGE1001]
gi|323381636|gb|ADX53727.1| Appr-1-p processing domain protein [Burkholderia sp. CCGE1001]
Length = 182
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 63/110 (57%), Gaps = 7/110 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAG +L + C + C G+A++T G +LP
Sbjct: 22 DAIVNAANTSLLGGGGVDGAIHRAAGRELLRECETLGG------CATGDAKLTRGHRLPA 75
Query: 93 SHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
+VIH VGPV+ + E D+L S Y+ L V + N IAFPAISCG+
Sbjct: 76 RYVIHAVGPVWRGGTHGEPDLLASCYQRSLEVAREVNCASIAFPAISCGI 125
>gi|345329033|ref|XP_003431324.1| PREDICTED: hypothetical protein LOC100681628 [Ornithorhynchus
anatinus]
Length = 413
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 74/142 (52%), Gaps = 12/142 (8%)
Query: 2 TFKVQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDL 61
T +V L S + + +GDI+ +D AIV+ N LL GG IH AAGP L
Sbjct: 52 TEEVSQLKKSLSEKVSLYRGDITLLEID----AIVNAANASLLGGGGVDGCIHRAAGPCL 107
Query: 62 QKACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNP--EDILRSAYKN 119
C + C G+A+IT G+ LP +VIHTVGP+ H + L S YK+
Sbjct: 108 VAECRNLNG------CETGQAKITCGYDLPAKYVIHTVGPIARGHIGDTQREDLASCYKS 161
Query: 120 CLSVGKANNIQYIAFPAISCGV 141
L + + NNI+ +AFP IS G+
Sbjct: 162 SLKLVQENNIRSVAFPCISTGI 183
>gi|283456232|ref|YP_003360796.1| ATPase [Bifidobacterium dentium Bd1]
gi|283102866|gb|ADB09972.1| ATPase associated with chromosome architecture/replication
[Bifidobacterium dentium Bd1]
Length = 151
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 68/111 (61%), Gaps = 8/111 (7%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPD-LQKACYQIPEAQPRVRCPPGEARITPGFKLP 91
DAIV+ N L++GG AI AAG + +Q AC ++ + GEA ITPGF LP
Sbjct: 12 DAIVNAANTDLMMGGGVCGAIFRAAGANRMQTACNRLSPIRT------GEAVITPGFDLP 65
Query: 92 VSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
+VIHT GPV++ + E+ +LR+ Y+NCL++ + + IAFP IS G+
Sbjct: 66 AKYVIHTAGPVWHGGDHDEEQLLRACYRNCLAIASVHGCKSIAFPLISAGI 116
>gi|307728344|ref|YP_003905568.1| Appr-1-p processing protein [Burkholderia sp. CCGE1003]
gi|307582879|gb|ADN56277.1| Appr-1-p processing domain protein [Burkholderia sp. CCGE1003]
Length = 182
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 62/110 (56%), Gaps = 7/110 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAG +L + C + C G+A++T G LP
Sbjct: 22 DAIVNAANSSLLGGGGVDGAIHRAAGKELLRECETLGG------CATGDAKLTRGHGLPA 75
Query: 93 SHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
+VIH VGPV+ + E D+L S Y+ L V + N IAFPAISCG+
Sbjct: 76 RYVIHAVGPVWRGGTHGEPDLLASCYQRSLEVAREANCASIAFPAISCGI 125
>gi|220910750|ref|YP_002486060.1| Appr-1-p processing protein [Cyanothece sp. PCC 7425]
gi|219867522|gb|ACL47859.1| Appr-1-p processing domain protein [Cyanothece sp. PCC 7425]
Length = 173
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 69/126 (54%), Gaps = 11/126 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPD-LQKACYQIPEAQPR 74
+I +GDI++ V+ AIV+ N L GG AI AAG + L+ AC QI
Sbjct: 9 FQIIQGDITQLQVE----AIVNAANNELRPGGGVCGAIFAAAGYEQLKTACEQIG----- 59
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
CP GEA IT GF LPV +IHTVGP++ ++LR Y++C+ ++ +AF
Sbjct: 60 -YCPTGEAVITSGFDLPVDWIIHTVGPIYQGKTEDAELLRQCYRSCMQFAGEERVRSLAF 118
Query: 135 PAISCG 140
P IS G
Sbjct: 119 PLISTG 124
>gi|410419298|ref|YP_006899747.1| Appr-1-p processing protein [Bordetella bronchiseptica MO149]
gi|427824569|ref|ZP_18991631.1| predicted phosphatase homologous to the c-terminal domain of
histone macroh2a1 [Bordetella bronchiseptica Bbr77]
gi|408446593|emb|CCJ58262.1| Appr-1-p processing domain protein [Bordetella bronchiseptica
MO149]
gi|410589834|emb|CCN04909.1| predicted phosphatase homologous to the c-terminal domain of
histone macroh2a1 [Bordetella bronchiseptica Bbr77]
Length = 175
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 71/135 (52%), Gaps = 11/135 (8%)
Query: 8 LSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQ 67
+ + +L+I GDI+ VD AIV+ N LL GG AIH AAGP L C
Sbjct: 1 MGGNAAHALRIVVGDITALDVD----AIVNAANNTLLGGGGVDGAIHRAAGPGLLAECRG 56
Query: 68 IPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKA 126
+ C G+ARIT G L HVIHTVGPV+ + E +L S Y+ L +
Sbjct: 57 LGG------CETGQARITGGHALRARHVIHTVGPVWRGGGHGEAALLASCYRESLRLACR 110
Query: 127 NNIQYIAFPAISCGV 141
+ ++ +AFPAIS GV
Sbjct: 111 HGLRSVAFPAISTGV 125
>gi|417767666|ref|ZP_12415602.1| RNase III regulator YmdB [Leptospira interrogans serovar Bulgarica
str. Mallika]
gi|417784133|ref|ZP_12431843.1| RNase III regulator YmdB [Leptospira interrogans str. C10069]
gi|418715544|ref|ZP_13275665.1| RNase III regulator YmdB [Leptospira interrogans str. UI 08452]
gi|400349684|gb|EJP01972.1| RNase III regulator YmdB [Leptospira interrogans serovar Bulgarica
str. Mallika]
gi|409952671|gb|EKO07180.1| RNase III regulator YmdB [Leptospira interrogans str. C10069]
gi|410788445|gb|EKR82163.1| RNase III regulator YmdB [Leptospira interrogans str. UI 08452]
Length = 177
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 78/131 (59%), Gaps = 9/131 (6%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTA--AAIHEAAGPDLQKACYQIPEA 71
+K+ K DI++ VD AIV+ N LL GG AIH A GP++ + CY+I E
Sbjct: 3 NKIKLIKEDITQLEVD----AIVNAANSSLLGGGGGGVDGAIHRAGGPEILEECYKIREK 58
Query: 72 QPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNF-HCNPEDILRSAYKNCLSVGKANNIQ 130
Q C GEA IT +L +IHTVGP+++ + N +++L +AYKN L + K ++++
Sbjct: 59 QGE--CKVGEAVITTAGRLNAKFIIHTVGPIWSGGNKNEDELLSNAYKNSLLLAKNHSLK 116
Query: 131 YIAFPAISCGV 141
IAFP IS G+
Sbjct: 117 TIAFPNISTGI 127
>gi|338811059|ref|ZP_08623296.1| Appr-1-p processing domain protein [Acetonema longum DSM 6540]
gi|337276956|gb|EGO65356.1| Appr-1-p processing domain protein [Acetonema longum DSM 6540]
Length = 256
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 72/128 (56%), Gaps = 12/128 (9%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGP-DLQKACYQIPEAQPR 74
+I + DI++ VD AIV+ N L +GG AI +AAG DLQ AC + Q
Sbjct: 3 FEIVRNDITKMKVD----AIVNAANTALQMGGGVCGAIFKAAGQTDLQAACDALRPIQT- 57
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
G+A IT GF LP H+IHT GPV+ + E++LRS Y N L++ + N + +A
Sbjct: 58 -----GQAVITDGFHLPARHIIHTAGPVYKDGKQGEEELLRSCYLNSLTLAQQNKCESVA 112
Query: 134 FPAISCGV 141
FP IS G+
Sbjct: 113 FPLISGGI 120
>gi|421836451|ref|ZP_16270930.1| RNase III inhibitor, partial [Clostridium botulinum CFSAN001627]
gi|409741659|gb|EKN41381.1| RNase III inhibitor, partial [Clostridium botulinum CFSAN001627]
Length = 134
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 74/136 (54%), Gaps = 9/136 (6%)
Query: 7 TLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACY 66
T+S+ K +KI K DI++ VD AIV+ N LL G AIH A G + + C
Sbjct: 2 TISYINK--IKIVKSDITKENVD----AIVNAANSSLLGGSGVDGAIHRAGGNKILEECK 55
Query: 67 QIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNF-HCNPEDILRSAYKNCLSVGK 125
I +R GEA IT G L +VIHTVGP+++ N E +L ++YKN L +
Sbjct: 56 SIVSKIGPLRT--GEAVITSGGNLKAKYVIHTVGPIWHGGKSNEETLLANSYKNSLKLAA 113
Query: 126 ANNIQYIAFPAISCGV 141
NI+ IAFP IS GV
Sbjct: 114 EKNIKTIAFPNISTGV 129
>gi|297260310|ref|XP_002798269.1| PREDICTED: MACRO domain-containing protein 2-like isoform 2 [Macaca
mulatta]
Length = 476
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 73/135 (54%), Gaps = 14/135 (10%)
Query: 9 SFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQI 68
S + K SL +GDI+ VD AIV+ N LL GG IH AAGP L C +
Sbjct: 67 SLTEKVSL--YRGDITLLEVD----AIVNAANASLLGGGGVDGCIHRAAGPCLLAECRNL 120
Query: 69 PEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNP--EDILRSAYKNCLSVGKA 126
C G A+IT G+ LP +VIHTVGP+ H N ++ L + YK+ L + K
Sbjct: 121 ------NGCDTGHAKITCGYDLPAKYVIHTVGPIARGHINGSHKEDLANCYKSSLKLVKE 174
Query: 127 NNIQYIAFPAISCGV 141
NNI+ +AFP IS G+
Sbjct: 175 NNIRSVAFPCISTGI 189
>gi|407712013|ref|YP_006832578.1| Appr-1-p processing protein [Burkholderia phenoliruptrix BR3459a]
gi|407234197|gb|AFT84396.1| Appr-1-p processing domain-containing protein [Burkholderia
phenoliruptrix BR3459a]
Length = 182
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 63/110 (57%), Gaps = 7/110 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAG +L + C + C G+A++T G +LP
Sbjct: 22 DAIVNAANTSLLGGGGVDGAIHRAAGRELLRECETLGG------CATGDAKLTRGHRLPA 75
Query: 93 SHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
+VIH VGPV+ + E D+L S Y+ L V + N IAFPAISCG+
Sbjct: 76 RYVIHAVGPVWRGGTHGEPDLLASCYQRSLEVAREVNCASIAFPAISCGI 125
>gi|397478599|ref|XP_003810630.1| PREDICTED: O-acetyl-ADP-ribose deacetylase MACROD2 isoform 2 [Pan
paniscus]
Length = 476
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 73/135 (54%), Gaps = 14/135 (10%)
Query: 9 SFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQI 68
S + K SL +GDI+ VD AIV+ N LL GG IH AAGP L C +
Sbjct: 67 SLTEKVSL--YRGDITLLEVD----AIVNAANASLLGGGGVDGCIHRAAGPCLLAECRNL 120
Query: 69 PEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNP--EDILRSAYKNCLSVGKA 126
C G A+IT G+ LP +VIHTVGP+ H N ++ L + YK+ L + K
Sbjct: 121 ------NGCDTGHAKITCGYDLPAKYVIHTVGPIARGHINGSHKEDLANCYKSSLKLVKE 174
Query: 127 NNIQYIAFPAISCGV 141
NNI+ +AFP IS G+
Sbjct: 175 NNIRSVAFPCISTGI 189
>gi|395332432|gb|EJF64811.1| A1pp-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 219
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 73/128 (57%), Gaps = 13/128 (10%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ + +GDI+R VD I++ N LL F A IH AAGP L + C ++
Sbjct: 41 VSLYQGDITRLDVD----CIINAANRGLLGESFDGA-IHAAAGPSLLEECRKLNG----- 90
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDI--LRSAYKNCLSVGKANNIQYIA 133
C G+A+IT G+ LP HVIHTVGP+++ E L S YK L + AN++++IA
Sbjct: 91 -CDTGDAKITKGYNLPSRHVIHTVGPIYSSAKAEEKAQQLASCYKRSLQLAVANSLKHIA 149
Query: 134 FPAISCGV 141
FP+IS G+
Sbjct: 150 FPSISTGI 157
>gi|443313718|ref|ZP_21043328.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Synechocystis sp. PCC 7509]
gi|442776131|gb|ELR86414.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Synechocystis sp. PCC 7509]
Length = 187
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 66/126 (52%), Gaps = 23/126 (18%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAG +L + C ++ C G+A+IT G+KLP
Sbjct: 15 DAIVNAANNFLLGGGGVDGAIHRAAGAELLQECRKLK------GCATGDAKITKGYKLPA 68
Query: 93 SHVIHTVGPVF---------NFHCN--------PEDILRSAYKNCLSVGKANNIQYIAFP 135
VIHTVGPV+ + C +D+L S Y+ L + K I+ +AFP
Sbjct: 69 KWVIHTVGPVWTGGKKGEAESLGCGSASPKAFQEDDLLASCYRRSLELTKEYQIKEVAFP 128
Query: 136 AISCGV 141
AIS GV
Sbjct: 129 AISTGV 134
>gi|90081874|dbj|BAE90218.1| unnamed protein product [Macaca fascicularis]
Length = 476
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 73/135 (54%), Gaps = 14/135 (10%)
Query: 9 SFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQI 68
S + K SL +GDI+ VD AIV+ N LL GG IH AAGP L C +
Sbjct: 67 SLTEKVSL--YRGDITLLEVD----AIVNAANASLLGGGGVDGCIHRAAGPCLLAECRNL 120
Query: 69 PEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNP--EDILRSAYKNCLSVGKA 126
C G A+IT G+ LP +VIHTVGP+ H N ++ L + YK+ L + K
Sbjct: 121 ------NGCDTGHAKITCGYDLPAKYVIHTVGPIARGHINGSHKEDLANCYKSSLKLVKE 174
Query: 127 NNIQYIAFPAISCGV 141
NNI+ +AFP IS G+
Sbjct: 175 NNIRSVAFPCISTGI 189
>gi|238854577|ref|ZP_04644912.1| ADP-ribose binding protein [Lactobacillus jensenii 269-3]
gi|260665294|ref|ZP_05866142.1| histone macroH2A1 family phosphatase [Lactobacillus jensenii
SJ-7A-US]
gi|313473126|ref|ZP_07813610.1| appr-1-p processing enzyme domain protein [Lactobacillus jensenii
1153]
gi|238832812|gb|EEQ25114.1| ADP-ribose binding protein [Lactobacillus jensenii 269-3]
gi|239528631|gb|EEQ67632.1| appr-1-p processing enzyme domain protein [Lactobacillus jensenii
1153]
gi|260560798|gb|EEX26774.1| histone macroH2A1 family phosphatase [Lactobacillus jensenii
SJ-7A-US]
Length = 172
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 66/115 (57%), Gaps = 7/115 (6%)
Query: 28 VDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPG 87
V+ SDAIV+ N+ LL GG AIH+AAGP L +AC ++ C G+A+IT
Sbjct: 18 VNFPSDAIVNAANKTLLGGGGVDGAIHQAAGPKLLEACKKLH------GCETGQAKITYS 71
Query: 88 FKLPV-SHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
F L ++IHTVGPVF +P+ L++ YKN L + + +AF IS GV
Sbjct: 72 FDLATCKYIIHTVGPVFKLSQSPKKELQACYKNSLDLAMKYKCRSVAFSGISTGV 126
>gi|359796066|ref|ZP_09298675.1| Appr-1-p processing domain-containing protein [Achromobacter
arsenitoxydans SY8]
gi|359366006|gb|EHK67694.1| Appr-1-p processing domain-containing protein [Achromobacter
arsenitoxydans SY8]
Length = 172
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 72/129 (55%), Gaps = 11/129 (8%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T L+ + DI++ V+ AIV+ N LL GG AIH AAGPDL C +
Sbjct: 3 TRLRAIQSDITKLHVE----AIVNAANSSLLGGGGVDGAIHRAAGPDLVHECRLLGG--- 55
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
C G+A++T G++L ++IHTVGPV+ + E +L S Y+ C+ + + I I
Sbjct: 56 ---CKTGDAKVTKGYRLSAQYIIHTVGPVWRGGDSGEPALLSSCYRRCIELAEERAIASI 112
Query: 133 AFPAISCGV 141
AFP+IS G+
Sbjct: 113 AFPSISTGI 121
>gi|354584986|ref|ZP_09003877.1| Appr-1-p processing domain protein [Paenibacillus lactis 154]
gi|353191103|gb|EHB56612.1| Appr-1-p processing domain protein [Paenibacillus lactis 154]
Length = 191
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 74/143 (51%), Gaps = 13/143 (9%)
Query: 2 TFKVQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDL 61
TFK+ +TS+ + GDI+ W + D IV+ N LL G AIH A GP++
Sbjct: 3 TFKI------GRTSVSVIIGDITTW----TGDIIVNAANSGLLGGKGVDGAIHSAGGPEI 52
Query: 62 QKACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNC 120
+ C +I + Q CPPG A IT +L H+IHTVGP++ E+ L Y+N
Sbjct: 53 MEQCMEIRKQQGG--CPPGNAVITGAGRLAAQHIIHTVGPIWEGGGRREEHTLAECYRNS 110
Query: 121 LSVGKANNIQYIAFPAISCGVSQ 143
L + + IAFP IS G+ +
Sbjct: 111 LLLAIEVGARSIAFPNISTGIYE 133
>gi|377577540|ref|ZP_09806522.1| O-acetyl-ADP-ribose deacetylase YmdB [Escherichia hermannii NBRC
105704]
gi|377541278|dbj|GAB51687.1| O-acetyl-ADP-ribose deacetylase YmdB [Escherichia hermannii NBRC
105704]
Length = 180
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 71/130 (54%), Gaps = 7/130 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K +++ +GDI+ ++D IV+ N L+ GG AIH AAGP L +AC Q+ + Q
Sbjct: 2 KPRIEVLQGDITLM----TTDVIVNAANASLMGGGGVDGAIHRAAGPALMEACKQVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
CP G A IT L V+H VGPV+ E +L AY+N L + AN +
Sbjct: 58 G--TCPTGHAVITGAGNLAAKAVVHAVGPVWRDGNQHEAQLLSDAYRNSLQLVSANVFKS 115
Query: 132 IAFPAISCGV 141
+AFPAIS G+
Sbjct: 116 VAFPAISTGI 125
>gi|365866044|ref|ZP_09405671.1| hypothetical protein SPW_5975 [Streptomyces sp. W007]
gi|364004522|gb|EHM25635.1| hypothetical protein SPW_5975 [Streptomyces sp. W007]
Length = 177
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 71/134 (52%), Gaps = 4/134 (2%)
Query: 8 LSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQ 67
+S S ++++ +GDI+ D+S D IV+ N LL GG AIH GPD+ AC +
Sbjct: 1 MSTSVSPAVRLVRGDIT----DQSVDVIVNAANSSLLGGGGVDGAIHRRGGPDILAACRE 56
Query: 68 IPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKAN 127
+ + P G+A T +L ++HTVGPVF+ + +L S Y+ L +
Sbjct: 57 LRASHYGKGLPTGQAVATTAGRLDARWIVHTVGPVFSGAQDRSALLASCYRESLRLAAEL 116
Query: 128 NIQYIAFPAISCGV 141
+ IAFPAIS G+
Sbjct: 117 GARSIAFPAISTGI 130
>gi|302783789|ref|XP_002973667.1| hypothetical protein SELMODRAFT_442142 [Selaginella moellendorffii]
gi|300158705|gb|EFJ25327.1| hypothetical protein SELMODRAFT_442142 [Selaginella moellendorffii]
Length = 264
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 70/142 (49%), Gaps = 21/142 (14%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLG--------------------GFTAAAIHEAAGPD 60
GDIS+W V DAIV+P N+ L G F + AIH AAGP
Sbjct: 74 GDISQWRVPGQRDAIVAPANKKLNAGIGVNRGKNYLFFICSFTNHTCFLSPAIHNAAGPS 133
Query: 61 LQKACYQIPEA-QPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKN 119
L +AC + Q V+C G A +T ++LP+ +IH VGP ++ +L Y+
Sbjct: 134 LAEACAMLKSLDQFGVKCRIGNAVVTKAYRLPLHRIIHAVGPAYDGAEETPTLLAQTYRR 193
Query: 120 CLSVGKANNIQYIAFPAISCGV 141
CL K ++ +AFP ISCGV
Sbjct: 194 CLQRAKEIELECLAFPPISCGV 215
>gi|426241638|ref|XP_004014696.1| PREDICTED: O-acetyl-ADP-ribose deacetylase MACROD2 [Ovis aries]
Length = 636
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 73/135 (54%), Gaps = 14/135 (10%)
Query: 9 SFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQI 68
S S K SL +GDI+ VD AIV+ N LL GG IH AAGP L C +
Sbjct: 273 SLSEKVSL--YRGDITLLEVD----AIVNAANASLLGGGGVDGCIHRAAGPCLLAECRNL 326
Query: 69 PEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNP--EDILRSAYKNCLSVGKA 126
C G A+IT G+ LP +VIHTVGP+ H N ++ L + YK+ L + K
Sbjct: 327 ------NGCETGHAKITCGYDLPAKYVIHTVGPIARGHINGSHKEDLANCYKSSLKLVKE 380
Query: 127 NNIQYIAFPAISCGV 141
NNI+ +AFP IS G+
Sbjct: 381 NNIRSVAFPCISTGI 395
>gi|242781667|ref|XP_002479847.1| LRP16 family protein [Talaromyces stipitatus ATCC 10500]
gi|218719994|gb|EED19413.1| LRP16 family protein [Talaromyces stipitatus ATCC 10500]
Length = 234
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 66/122 (54%), Gaps = 12/122 (9%)
Query: 22 DISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGE 81
DI+R VD IV+ N+ L GG AIH AAG L C + C G+
Sbjct: 48 DITRLQVD----GIVNAANQWLQGGGGVDGAIHHAAGSQLLAECRTLDG------CNTGD 97
Query: 82 ARITPGFKLPVSHVIHTVGPVF--NFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISC 139
A+IT G+ LP + VIH VGP++ +H E +LRS Y+ L + NN++ +AF AIS
Sbjct: 98 AKITNGYNLPAAKVIHAVGPIYEERYHLTLERLLRSCYRRSLQLAVENNLRSVAFSAIST 157
Query: 140 GV 141
GV
Sbjct: 158 GV 159
>gi|171742703|ref|ZP_02918510.1| hypothetical protein BIFDEN_01817 [Bifidobacterium dentium ATCC
27678]
gi|171278317|gb|EDT45978.1| macro domain protein [Bifidobacterium dentium ATCC 27678]
Length = 155
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 67/111 (60%), Gaps = 8/111 (7%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPD-LQKACYQIPEAQPRVRCPPGEARITPGFKLP 91
DAIV+ N L++GG AI AAG + +Q AC ++ + GEA ITPGF LP
Sbjct: 16 DAIVNAANTDLMMGGGVCGAIFRAAGANRMQTACNRLSPIRT------GEAVITPGFDLP 69
Query: 92 VSHVIHTVGPVFN-FHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
+VIHT GPV++ + E +LR+ Y+NCL++ + + IAFP IS G+
Sbjct: 70 AKYVIHTAGPVWHGGDHDEEQLLRACYRNCLAIASVHGCKSIAFPLISAGI 120
>gi|392339574|ref|XP_003753846.1| PREDICTED: O-acetyl-ADP-ribose deacetylase MACROD2-like [Rattus
norvegicus]
Length = 288
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 73/135 (54%), Gaps = 14/135 (10%)
Query: 9 SFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQI 68
S S K SL +GDI+ VD AIV+ N LL GG IH AAGP L C +
Sbjct: 67 SLSEKVSL--YRGDITLLEVD----AIVNAANASLLGGGGVDGCIHRAAGPCLLAECRNL 120
Query: 69 PEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNP--EDILRSAYKNCLSVGKA 126
C G A+IT G+ LP +VIHTVGP+ H N ++ L + Y++ L + K
Sbjct: 121 NG------CETGHAKITCGYDLPAKYVIHTVGPIARGHINGSHKEDLANCYQSSLKLVKE 174
Query: 127 NNIQYIAFPAISCGV 141
NN++ +AFP IS G+
Sbjct: 175 NNLRSVAFPCISTGI 189
>gi|255321207|ref|ZP_05362373.1| appr-1-p processing [Acinetobacter radioresistens SK82]
gi|262380108|ref|ZP_06073263.1| appr-1-p processing enzyme family protein [Acinetobacter
radioresistens SH164]
gi|255301761|gb|EET81012.1| appr-1-p processing [Acinetobacter radioresistens SK82]
gi|262298302|gb|EEY86216.1| appr-1-p processing enzyme family protein [Acinetobacter
radioresistens SH164]
Length = 186
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 70/128 (54%), Gaps = 7/128 (5%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
++ GDI+ +D AIV+ N LL G AIH+A GPD+ + C QI Q
Sbjct: 3 QFRLIHGDITGIRID----AIVNAANSTLLGGHGVDGAIHQAGGPDIIEECRQIRARQG- 57
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
C GEA +T G +LP +VIHTVGP++ N +L AY+N ++ + + + IA
Sbjct: 58 -SCTVGEAVMTTGGRLPAQYVIHTVGPIWEEGKANERTLLSQAYQNSFALAEQHYLTGIA 116
Query: 134 FPAISCGV 141
+P IS GV
Sbjct: 117 YPNISTGV 124
>gi|227876145|ref|ZP_03994263.1| Appr-1-p processing domain protein [Mobiluncus mulieris ATCC 35243]
gi|227843301|gb|EEJ53492.1| Appr-1-p processing domain protein [Mobiluncus mulieris ATCC 35243]
Length = 275
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 65/123 (52%), Gaps = 8/123 (6%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPG 80
GDI+R VD AIV+ N LL GG AIH AAG +L AC I + P G
Sbjct: 8 GDITRVHVD----AIVNAANSTLLGGGGVDGAIHRAAGTELLAACRVIRATRYPDGLPVG 63
Query: 81 EARITPGFKLPVSHVIHTVGPVFNFHCNPED--ILRSAYKNCLSVGKANNIQYIAFPAIS 138
+A T GFKLP VIHTVGP N H D +LR+A+ N L +AFPAIS
Sbjct: 64 QAVATKGFKLPAKWVIHTVGP--NRHAGQTDPGLLRAAFVNSLREAARVGAHSVAFPAIS 121
Query: 139 CGV 141
GV
Sbjct: 122 GGV 124
>gi|404215882|ref|YP_006670077.1| putative phosphatase [Gordonia sp. KTR9]
gi|403646681|gb|AFR49921.1| putative phosphatase [Gordonia sp. KTR9]
Length = 171
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
TS+ + +GDI+ +S DAIV+ N LL GG AIH GP + C ++
Sbjct: 2 TSITLVQGDIT----TQSVDAIVNAANSTLLGGGGVDGAIHRRGGPAILAECKELRAGAY 57
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
R P GEA T LP VIHTVGPV ++ + +L S Y+ L V IA
Sbjct: 58 RRGLPVGEAVATTAGDLPARWVIHTVGPVHSYDEDRSTLLVSCYRESLRVATELGATTIA 117
Query: 134 FPAISCGV 141
FPAIS GV
Sbjct: 118 FPAISTGV 125
>gi|453381910|dbj|GAC83643.1| hypothetical protein GP2_013_01200 [Gordonia paraffinivorans NBRC
108238]
Length = 170
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
TS+ + +GDI+ +S DAIV+ N LL GG AIH GP + C Q+ +
Sbjct: 2 TSITLVQGDITL----QSVDAIVNAANSTLLGGGGVDGAIHRRGGPAILAECKQLRAGRY 57
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
R P GEA T L VIHTVGPV ++ + + L S Y+ L V + + IA
Sbjct: 58 RRGLPVGEAVATTAGDLDARWVIHTVGPVHSYDEDRSEYLISCYRESLRVAEELGARTIA 117
Query: 134 FPAISCGV 141
FPAIS GV
Sbjct: 118 FPAISTGV 125
>gi|291548424|emb|CBL21532.1| Predicted phosphatase homologous to the C-terminal domain of
histone macroH2A1 [Ruminococcus sp. SR1/5]
Length = 338
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 69/127 (54%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L+I + DI++ VD AIV+ N LL GG IH AAGP+L C +
Sbjct: 3 LQIIRNDITKMRVD----AIVNAANTSLLGGGGVDGCIHRAAGPELLAECSTLH------ 52
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
C G A+IT G++LP +VIH VGP + + E +L S Y+ L++ K N Q +AF
Sbjct: 53 GCETGSAKITKGYRLPCKYVIHAVGPRWRDGKHQEQQLLESCYRTSLNLAKENGCQSVAF 112
Query: 135 PAISCGV 141
P IS G+
Sbjct: 113 PLISSGI 119
>gi|347360947|ref|NP_001004573.2| MACRO domain-containing protein 1 [Danio rerio]
Length = 327
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 73/131 (55%), Gaps = 14/131 (10%)
Query: 15 SLKIS--KGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
++K+S GDI++ +D A+ + N+ LL GG AIH AGP L+K C +
Sbjct: 146 NMKVSLFGGDITKLEID----AVANAANKTLLGGGGVDGAIHRGAGPLLRKECATLNG-- 199
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHC--NPEDILRSAYKNCLSVGKANNIQ 130
C GEA+IT + LP +VIHTVGP+ + E+ LR+ Y NCL ++++
Sbjct: 200 ----CETGEAKITGAYGLPARYVIHTVGPIVHDSVGEREEEALRNCYYNCLHTATKHHLR 255
Query: 131 YIAFPAISCGV 141
+AFP IS GV
Sbjct: 256 TVAFPCISTGV 266
>gi|419374905|ref|ZP_13915945.1| regulator of RNase III activity, partial [Escherichia coli DEC14B]
gi|378223290|gb|EHX83515.1| regulator of RNase III activity, partial [Escherichia coli DEC14B]
Length = 119
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 68/124 (54%), Gaps = 7/124 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
KT + + +GDI++ VD IV+ N L+ GG AIH AAGP L AC ++ + Q
Sbjct: 2 KTRIHVVQGDITKLAVD----VIVNAANPSLMGGGGVDGAIHRAAGPALLDACLKVRQQQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQY 131
CP G A IT LP V+HTVGPV+ ED +L+ AY N L + AN+
Sbjct: 58 G--DCPTGHAVITLAGALPAKAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVAANSYTS 115
Query: 132 IAFP 135
+AFP
Sbjct: 116 VAFP 119
>gi|336420257|ref|ZP_08600493.1| appr-1-p processing enzyme domain protein [Fusobacterium sp.
11_3_2]
gi|336161298|gb|EGN64304.1| appr-1-p processing enzyme domain protein [Fusobacterium sp.
11_3_2]
Length = 175
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 78/152 (51%), Gaps = 13/152 (8%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K +K+ GDI++ +AIV+ N L +GG AI AAG DL K C +I
Sbjct: 3 KDIIKLVSGDITKVP---EVEAIVNAANTSLEMGGGVCGAIFRAAGNDLIKECKEIG--- 56
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
C GEA IT G+ LP ++IHTVGP ++ N E + L SAY L + K I+
Sbjct: 57 ---ACNTGEAVITKGYNLPNKYIIHTVGPRYSTGENGEAERLASAYYESLKLAKKKGIRK 113
Query: 132 IAFPAISCGVSQIMTH---AIKLQTNCGFLES 160
IAFP+IS G+ + I L T FL+
Sbjct: 114 IAFPSISTGIYRFPVDEGAEIALNTAIKFLDE 145
>gi|71907557|ref|YP_285144.1| Appr-1-p processing [Dechloromonas aromatica RCB]
gi|71847178|gb|AAZ46674.1| Appr-1-p processing [Dechloromonas aromatica RCB]
Length = 186
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 72/126 (57%), Gaps = 5/126 (3%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ GD++ D++ DAIV+ N LL GG AIH GP + AC ++ +Q
Sbjct: 14 VRLYVGDLT----DQAVDAIVNAANRTLLGGGGVDGAIHRRGGPAILDACRELRRSQWPD 69
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
P G+ +T G KLP +VIHTVGP++ H E ++L + Y+N + + ++ +AF
Sbjct: 70 GLPTGQVALTNGGKLPAPYVIHTVGPIYGQHRGKEAELLAACYRNAIELAAHLELKSLAF 129
Query: 135 PAISCG 140
P+IS G
Sbjct: 130 PSISTG 135
>gi|336399908|ref|ZP_08580707.1| hypothetical protein HMPREF0404_02035 [Fusobacterium sp. 21_1A]
gi|336163548|gb|EGN66471.1| hypothetical protein HMPREF0404_02035 [Fusobacterium sp. 21_1A]
Length = 175
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 78/152 (51%), Gaps = 13/152 (8%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K +K+ GDI++ +AIV+ N L +GG AI AAG DL K C +I
Sbjct: 3 KDIIKLVSGDITKVP---EVEAIVNAANTSLEMGGGVCGAIFRAAGNDLIKECKEIG--- 56
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
C GEA IT G+ LP ++IHTVGP ++ N E + L SAY L + K I+
Sbjct: 57 ---GCNTGEAVITKGYNLPNKYIIHTVGPRYSTGENGEAERLASAYYKSLKLAKKKGIRK 113
Query: 132 IAFPAISCGVSQIMTH---AIKLQTNCGFLES 160
IAFP+IS G+ + I L T FL+
Sbjct: 114 IAFPSISTGIYRFPVDEGAEIALNTAIKFLDE 145
>gi|310826966|ref|YP_003959323.1| hypothetical protein [Eubacterium limosum KIST612]
gi|308738700|gb|ADO36360.1| hypothetical protein ELI_1374 [Eubacterium limosum KIST612]
Length = 172
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 78/152 (51%), Gaps = 17/152 (11%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
++++ GDI+R D DAIV+ N LL GG AIH AAGP+L C +
Sbjct: 3 NIELLLGDITR---DYGVDAIVNAANSSLLGGGGVDGAIHRAAGPELLAECRTLGG---- 55
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIA 133
C G A+ T ++LP +VIHTVGPV++ E +LR Y N + + + +A
Sbjct: 56 --CATGGAKTTRAYRLPCKYVIHTVGPVWHGGGQHEAALLRDCYGNAMMRAQEAGARSVA 113
Query: 134 FPAISCGVSQI---MTHAIKLQTNCGFLESFW 162
FP++S GV AI L+T ++ FW
Sbjct: 114 FPSVSTGVYHYPVDQAAAIALKT----VQDFW 141
>gi|74317213|ref|YP_314953.1| hypothetical protein Tbd_1195 [Thiobacillus denitrificans ATCC
25259]
gi|74056708|gb|AAZ97148.1| appr-1-p processing phosphatase [Thiobacillus denitrificans ATCC
25259]
Length = 171
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 63/110 (57%), Gaps = 7/110 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAGP L +AC + C G+A++TPG+ LP
Sbjct: 18 DAIVNAANPSLLGGGGVDGAIHRAAGPQLLEACRALGG------CATGDAKLTPGYALPA 71
Query: 93 SHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
VIHTVGPV+ + E +L S Y+ + + + + IAFPAIS GV
Sbjct: 72 RFVIHTVGPVWRGGLDGEPALLASCYRRAIELAADHGLASIAFPAISTGV 121
>gi|237743063|ref|ZP_04573544.1| ATPase [Fusobacterium sp. 7_1]
gi|229433623|gb|EEO43835.1| ATPase [Fusobacterium sp. 7_1]
Length = 175
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 78/152 (51%), Gaps = 13/152 (8%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K +K+ GDI++ +AIV+ N L +GG AI AAG DL K C +I
Sbjct: 3 KDIIKLVSGDITKVP---EVEAIVNAANTSLEMGGGVCGAIFRAAGNDLIKECKEIG--- 56
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
C GEA IT G+ LP ++IHTVGP ++ N E + L SAY L + K I+
Sbjct: 57 ---GCNTGEAVITKGYNLPNKYIIHTVGPRYSTGENGEAERLASAYYESLKLAKKKGIRK 113
Query: 132 IAFPAISCGVSQIMTH---AIKLQTNCGFLES 160
IAFP+IS G+ + I L T FL+
Sbjct: 114 IAFPSISTGIYRFPVDEGAEIALNTAIKFLDE 145
>gi|42525750|ref|NP_970848.1| appr-1-p processing [Treponema denticola ATCC 35405]
gi|449110535|ref|ZP_21747135.1| hypothetical protein HMPREF9735_00184 [Treponema denticola ATCC
33521]
gi|449114656|ref|ZP_21751132.1| hypothetical protein HMPREF9721_01650 [Treponema denticola ATCC
35404]
gi|41815761|gb|AAS10729.1| appr-1-p processing enzyme domain protein [Treponema denticola ATCC
35405]
gi|448955659|gb|EMB36424.1| hypothetical protein HMPREF9721_01650 [Treponema denticola ATCC
35404]
gi|448959909|gb|EMB40626.1| hypothetical protein HMPREF9735_00184 [Treponema denticola ATCC
33521]
Length = 176
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 75/132 (56%), Gaps = 11/132 (8%)
Query: 11 STKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPE 70
+T T ++I DI++ VD AIV+ N LL G AIH AAGP+L + C +
Sbjct: 3 NTSTLIEIINADITKLKVD----AIVNAANTTLLGGSGVDGAIHAAAGPELLEECRTLK- 57
Query: 71 AQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNI 129
C G+A+IT +KLP ++IHT GPV+ N E ++L ++Y++CL++
Sbjct: 58 -----GCKTGKAKITGAYKLPSKYIIHTPGPVYENGKNGEPELLANSYRSCLNLAFEYGC 112
Query: 130 QYIAFPAISCGV 141
+ IAFP IS GV
Sbjct: 113 KSIAFPCISTGV 124
>gi|310780513|ref|YP_003968845.1| Appr-1-p processing protein [Ilyobacter polytropus DSM 2926]
gi|309749836|gb|ADO84497.1| Appr-1-p processing domain protein [Ilyobacter polytropus DSM 2926]
Length = 175
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 78/151 (51%), Gaps = 14/151 (9%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
+ L I +GDI++ + +D IV+ N LL GG AIH+AAGP+L K C +
Sbjct: 5 SKLSIVRGDITK----QKADVIVNAANVSLLGGGGVDGAIHKAAGPELLKECKKFH---- 56
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYI 132
CP GEAR+T + L ++IHT GP++ + E +LR +Y + L ++ I
Sbjct: 57 --GCPTGEARVTKAYNLNAEYIIHTPGPIWRGGFFDEESLLRKSYVSSLKKAIELKVKSI 114
Query: 133 AFPAISCGVSQI---MTHAIKLQTNCGFLES 160
AFP+IS G + I L T FL S
Sbjct: 115 AFPSISTGGHKFPLDTASEIALNTISEFLNS 145
>gi|312071822|ref|XP_003138785.1| hypothetical protein LOAG_03200 [Loa loa]
gi|307766051|gb|EFO25285.1| hypothetical protein LOAG_03200 [Loa loa]
Length = 197
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 72/129 (55%), Gaps = 13/129 (10%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ I KGDI+++ +D AIV+ N LL GG AIH AAG L C ++
Sbjct: 27 IAIDKGDITKFEID----AIVNAANSSLLGGGGVDGAIHRAAGRRLYDECKKLNG----- 77
Query: 76 RCPPGEARITPGFKLP-VSHVIHTVGPVFNFHCNPE--DILRSAYKNCLSVGKANNIQYI 132
C GEA+IT + + + HVIHTVGP + + E + L+S Y L++ ANN++ I
Sbjct: 78 -CKTGEAKITGAYDMKHIKHVIHTVGPQVHSKVSEEQRNQLKSCYIQSLNIAIANNLRTI 136
Query: 133 AFPAISCGV 141
AFP IS GV
Sbjct: 137 AFPCISTGV 145
>gi|343523003|ref|ZP_08759968.1| macro domain protein [Actinomyces sp. oral taxon 175 str. F0384]
gi|343400751|gb|EGV13263.1| macro domain protein [Actinomyces sp. oral taxon 175 str. F0384]
Length = 182
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAGP L AC ++ + + P G A TPGF LP
Sbjct: 16 DAIVNAANSTLLGGGGVDGAIHRAAGPGLLDACQKVRDTELPDGLPVGRAVATPGFDLPA 75
Query: 93 SHVIHTVGPVFNFHCNPED--ILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
+ VIHTVGP N H +D +LR+ + + L++ IA PA+S GV
Sbjct: 76 AWVIHTVGP--NLHAGEDDPALLRACFDSSLALAIQLGCTGIALPAVSAGV 124
>gi|432906930|ref|XP_004077597.1| PREDICTED: O-acetyl-ADP-ribose deacetylase MACROD2-like [Oryzias
latipes]
Length = 398
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 75/143 (52%), Gaps = 14/143 (9%)
Query: 1 MTFKVQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPD 60
+T S K SL KGDI+ VD AIV+ N LL GG IH+AAG
Sbjct: 55 LTGGGGAGGLSDKVSL--YKGDITILEVD----AIVNAANSSLLGGGGVDGCIHKAAGSC 108
Query: 61 LQKACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED--ILRSAYK 118
L + C + C G+A+IT G+ LP +VIHTVGPV H P + L S Y+
Sbjct: 109 LYEECLSLK------GCETGKAKITCGYDLPAKYVIHTVGPVARGHVGPTESSDLASCYQ 162
Query: 119 NCLSVGKANNIQYIAFPAISCGV 141
N L + + +N++ +AFP IS G+
Sbjct: 163 NSLRLMEEHNLRTVAFPCISTGI 185
>gi|421527135|ref|ZP_15973739.1| ATPase associated with chromosome architecture/replication
[Fusobacterium nucleatum ChDC F128]
gi|402256569|gb|EJU07047.1| ATPase associated with chromosome architecture/replication
[Fusobacterium nucleatum ChDC F128]
Length = 175
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 78/152 (51%), Gaps = 13/152 (8%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K +K+ GDI++ +A+V+ N L +GG AI AAG +L K C +I
Sbjct: 3 KDVIKLVSGDITKI---PEVEAVVNAANNYLEMGGGVCGAIFRAAGNELIKECKEIG--- 56
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
C GEA IT G+ LP ++IHTVGP + N E + L+SAY L + K I+
Sbjct: 57 ---GCNTGEAVITKGYNLPNKYIIHTVGPRYTTGENGEAEKLKSAYYESLKLAKIKGIRK 113
Query: 132 IAFPAISCGVSQIMTH---AIKLQTNCGFLES 160
IAFP+IS G+ + I L T FL+
Sbjct: 114 IAFPSISTGIYRFPVDEGAKIALSTAIKFLDE 145
>gi|167746256|ref|ZP_02418383.1| hypothetical protein ANACAC_00961 [Anaerostipes caccae DSM 14662]
gi|317470672|ref|ZP_07930057.1| hypothetical protein HMPREF1011_00404 [Anaerostipes sp. 3_2_56FAA]
gi|167654249|gb|EDR98378.1| macro domain protein [Anaerostipes caccae DSM 14662]
gi|316901807|gb|EFV23736.1| hypothetical protein HMPREF1011_00404 [Anaerostipes sp. 3_2_56FAA]
Length = 167
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 73/128 (57%), Gaps = 11/128 (8%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+KI+ GDI++ +DAIV+ N LL GG AIH AAGP+L C +
Sbjct: 2 EIKITLGDITKV----PADAIVNAANPTLLGGGGVDGAIHAAAGPELLAECRTLG----- 52
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCN-PEDILRSAYKNCLSVGKANNIQYIA 133
C G+A+IT ++LP +VIHT GPV+ + E++L YK+CL + + +++
Sbjct: 53 -GCDTGDAKITKAYRLPAQYVIHTPGPVWRDGDDCEEELLADCYKSCLKLAAEHGCRHVT 111
Query: 134 FPAISCGV 141
FP+IS G+
Sbjct: 112 FPSISTGL 119
>gi|429109819|ref|ZP_19171589.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Cronobacter malonaticus 507]
gi|426310976|emb|CCJ97702.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Cronobacter malonaticus 507]
Length = 180
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 67/127 (52%), Gaps = 7/127 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ + +GDI+R VD IV+ N L+ GG AIH AAGP L AC + + Q
Sbjct: 5 INVVQGDITRIDVD----VIVNAANPSLMGGGGVDGAIHRAAGPALLAACKVVRQQQG-- 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C PG A IT L V+HTVGPV+ N +L AY+N L + AN +AF
Sbjct: 59 ECQPGHAVITEAGNLAAKAVVHTVGPVWRGGQDNETQLLADAYRNSLQLVAANGYSSVAF 118
Query: 135 PAISCGV 141
PAIS G+
Sbjct: 119 PAISTGI 125
>gi|20807475|ref|NP_622646.1| hypothetical protein TTE0995 [Thermoanaerobacter tengcongensis MB4]
gi|25453331|sp|Q8RB30.1|Y995_THETN RecName: Full=Macro domain-containing protein TTE0995
gi|20516002|gb|AAM24250.1| conserved hypothetical protein [Thermoanaerobacter tengcongensis
MB4]
Length = 175
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 71/129 (55%), Gaps = 7/129 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K +K+ KG+I VD+ DAIV+ N L+ GG AIH+A GP + + I E Q
Sbjct: 2 KEKIKLIKGNI----VDQEVDAIVNAANSSLIGGGGVDGAIHKAGGPAIAEELKVIREKQ 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQY 131
CP G A IT L +VIH VGP++ + N +++L SAY L + N++
Sbjct: 58 G--GCPTGHAVITGAGNLKAKYVIHAVGPIWKGGNHNEDNLLASAYIESLKLADEYNVKT 115
Query: 132 IAFPAISCG 140
IAFP+IS G
Sbjct: 116 IAFPSISTG 124
>gi|422500380|ref|ZP_16576636.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL063PA2]
gi|313828626|gb|EFS66340.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL063PA2]
Length = 171
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 59/109 (54%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DA+V+ N L GG AIH AAGP+L +AC ++ E P G++ T K+P
Sbjct: 17 DAVVNAANRQLAGGGGVDGAIHRAAGPELSQACRKLRETTLTDGLPTGQSVATTAGKMPA 76
Query: 93 SHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
VIHTVGPV+ + D L S Y+ L V + + IAFP IS GV
Sbjct: 77 KWVIHTVGPVWAKTIDKSDQLASCYRTSLHVADEIDARTIAFPTISAGV 125
>gi|307719707|ref|YP_003875239.1| hypothetical protein STHERM_c20310 [Spirochaeta thermophila DSM
6192]
gi|306533432|gb|ADN02966.1| hypothetical protein STHERM_c20310 [Spirochaeta thermophila DSM
6192]
Length = 181
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 70/126 (55%), Gaps = 9/126 (7%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++ +GDI+ +AIV+ N +L+ GG A AIH AAGP L + C + +P
Sbjct: 11 IETRQGDIASQP---DLEAIVNAANAMLMPGGGVAGAIHRAAGPGLAEECRKYAPIKP-- 65
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFP 135
GEA IT G LP +VIHT+GPV+ D+L Y+N L + + + I+ + FP
Sbjct: 66 ----GEAVITGGHNLPNRYVIHTLGPVYGKDRPEADLLSRCYENSLRLCEQHRIESVGFP 121
Query: 136 AISCGV 141
AIS GV
Sbjct: 122 AISTGV 127
>gi|407644599|ref|YP_006808358.1| RNase III inhibitor [Nocardia brasiliensis ATCC 700358]
gi|407307483|gb|AFU01384.1| RNase III inhibitor [Nocardia brasiliensis ATCC 700358]
Length = 176
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Query: 20 KGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPP 79
+GDI+R +S DAIV+ N LL GG AIH A GP++ AC ++ + R P
Sbjct: 15 RGDITR----QSVDAIVNAANSSLLGGGGVDGAIHAAGGPEILAACRELRATRYRQGLPV 70
Query: 80 GEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISC 139
G A T +L VIHTVGP+++ + +L S Y+ L A Q IAFPAIS
Sbjct: 71 GHAVATTAGRLSARWVIHTVGPIWSPTEDRSALLASCYRESLRAATALGAQTIAFPAIST 130
Query: 140 G 140
G
Sbjct: 131 G 131
>gi|365962118|ref|YP_004943684.1| RNase III inhibitor [Propionibacterium acnes TypeIA2 P.acn31]
gi|365964362|ref|YP_004945927.1| RNase III inhibitor [Propionibacterium acnes TypeIA2 P.acn17]
gi|365973299|ref|YP_004954858.1| RNase III inhibitor [Propionibacterium acnes TypeIA2 P.acn33]
gi|422427171|ref|ZP_16504089.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL087PA1]
gi|422431930|ref|ZP_16508800.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL059PA2]
gi|422435053|ref|ZP_16511911.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL083PA2]
gi|422442771|ref|ZP_16519574.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL002PA1]
gi|422446567|ref|ZP_16523312.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL027PA1]
gi|422450084|ref|ZP_16526801.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL030PA2]
gi|422453203|ref|ZP_16529899.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL087PA3]
gi|422511494|ref|ZP_16587637.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL059PA1]
gi|422538375|ref|ZP_16614249.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL013PA1]
gi|422541159|ref|ZP_16617017.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL037PA1]
gi|422546476|ref|ZP_16622303.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL050PA3]
gi|422550900|ref|ZP_16626697.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL050PA1]
gi|422557668|ref|ZP_16633411.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL025PA2]
gi|422562473|ref|ZP_16638151.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL046PA1]
gi|422570548|ref|ZP_16646143.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL067PA1]
gi|422578214|ref|ZP_16653743.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL005PA4]
gi|313765495|gb|EFS36859.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL013PA1]
gi|313815103|gb|EFS52817.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL059PA1]
gi|314915863|gb|EFS79694.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL005PA4]
gi|314917140|gb|EFS80971.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL050PA1]
gi|314921414|gb|EFS85245.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL050PA3]
gi|314931263|gb|EFS95094.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL067PA1]
gi|314954913|gb|EFS99319.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL027PA1]
gi|314958846|gb|EFT02948.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL002PA1]
gi|314969535|gb|EFT13633.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL037PA1]
gi|315099886|gb|EFT71862.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL059PA2]
gi|315101804|gb|EFT73780.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL046PA1]
gi|315110239|gb|EFT82215.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL030PA2]
gi|327454681|gb|EGF01336.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL087PA3]
gi|327456755|gb|EGF03410.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL083PA2]
gi|328755737|gb|EGF69353.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL087PA1]
gi|328756517|gb|EGF70133.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL025PA2]
gi|365738799|gb|AEW83001.1| RNase III inhibitor [Propionibacterium acnes TypeIA2 P.acn31]
gi|365741043|gb|AEW80737.1| RNase III inhibitor [Propionibacterium acnes TypeIA2 P.acn17]
gi|365743298|gb|AEW78495.1| RNase III inhibitor [Propionibacterium acnes TypeIA2 P.acn33]
Length = 171
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 59/109 (54%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DA+V+ N L GG AIH AAGP+L +AC ++ E P G++ T K+P
Sbjct: 17 DAVVNAANRQLAGGGGVDGAIHRAAGPELSQACRKLRETTLTDGLPTGQSVATTAGKMPA 76
Query: 93 SHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
VIHTVGPV+ + D L S Y+ L V + + IAFP IS GV
Sbjct: 77 KWVIHTVGPVWAKTIDKSDQLASCYRTSLHVADEIDARTIAFPTISAGV 125
>gi|20178171|sp|Q9KHE2.1|Y189_STRGR RecName: Full=Macro domain-containing protein in non 5'region;
AltName: Full=ORF1
gi|8896100|gb|AAF81228.1| unknown [Streptomyces griseus subsp. griseus]
Length = 177
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 71/134 (52%), Gaps = 4/134 (2%)
Query: 8 LSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQ 67
+S S +++ +GDI+ D+S D IV+ N LL GG AIH GPD+ AC +
Sbjct: 1 MSTSVSPVVRLVRGDIT----DQSVDVIVNAANSSLLGGGGVDGAIHRRGGPDILAACRE 56
Query: 68 IPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKAN 127
+ ++ P G+A T +L ++HTVGPVF+ + +L S Y+ L +
Sbjct: 57 LRASRYGKGLPTGQAVATTAGRLDARWIVHTVGPVFSGAQDRSALLASCYRESLRLAAEL 116
Query: 128 NIQYIAFPAISCGV 141
+ IAFPAIS G+
Sbjct: 117 GARSIAFPAISTGI 130
>gi|392346752|ref|XP_002729284.2| PREDICTED: O-acetyl-ADP-ribose deacetylase MACROD2-like [Rattus
norvegicus]
Length = 531
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 73/135 (54%), Gaps = 14/135 (10%)
Query: 9 SFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQI 68
S S K SL +GDI+ VD AIV+ N LL GG IH AAGP L C +
Sbjct: 122 SLSEKVSL--YRGDITLLEVD----AIVNAANASLLGGGGVDGCIHRAAGPCLLAECRNL 175
Query: 69 PEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNP--EDILRSAYKNCLSVGKA 126
C G A+IT G+ LP +VIHTVGP+ H N ++ L + Y++ L + K
Sbjct: 176 ------NGCETGHAKITCGYDLPAKYVIHTVGPIARGHINGSHKEDLANCYQSSLKLVKE 229
Query: 127 NNIQYIAFPAISCGV 141
NN++ +AFP IS G+
Sbjct: 230 NNLRSVAFPCISTGI 244
>gi|226324992|ref|ZP_03800510.1| hypothetical protein COPCOM_02784 [Coprococcus comes ATCC 27758]
gi|225206340|gb|EEG88694.1| macro domain protein [Coprococcus comes ATCC 27758]
Length = 336
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 71/129 (55%), Gaps = 15/129 (11%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L+I + DI++ VD AIV+ N LL GG IH AAGP L C +
Sbjct: 3 LQIVRNDITKMSVD----AIVNAANSSLLGGGGVDGCIHRAAGPKLLAECRTLG------ 52
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF---NFHCNPEDILRSAYKNCLSVGKANNIQYI 132
C G+A+IT + LP ++VIH VGP++ FH ++L S Y+N L++ K + + I
Sbjct: 53 GCQTGDAKITNAYDLPCNYVIHAVGPIWRGGQFH--ERELLTSCYENSLALAKEKHCETI 110
Query: 133 AFPAISCGV 141
AFP IS G+
Sbjct: 111 AFPLISSGI 119
>gi|56459216|ref|YP_154497.1| phosphatase [Idiomarina loihiensis L2TR]
gi|56178226|gb|AAV80948.1| Predicted phosphatase [Idiomarina loihiensis L2TR]
Length = 167
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 67/120 (55%), Gaps = 9/120 (7%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPG 80
GDI++ +AIV+ N L GG A AIH AAGP+L+KA + +P G
Sbjct: 8 GDINQQT---EIEAIVNAANAKLQTGGGVAGAIHRAAGPELEKATRSLAPIKP------G 58
Query: 81 EARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCG 140
EA IT F LP +VIH +GPV+ + +L YKN L + + + ++ IAFPAIS G
Sbjct: 59 EAVITEAFDLPNKYVIHCLGPVYGSDEPSDKLLADCYKNALDLTEKHKVESIAFPAISTG 118
>gi|428201219|ref|YP_007079808.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Pleurocapsa sp. PCC 7327]
gi|427978651|gb|AFY76251.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Pleurocapsa sp. PCC 7327]
Length = 176
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 71/132 (53%), Gaps = 12/132 (9%)
Query: 11 STKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPE 70
S+K L I +GDI++ VD AIV+ N LL GG AIH AAG L + C ++
Sbjct: 3 SSKKILAI-QGDITQQAVD----AIVNAANNSLLGGGGVDGAIHRAAGSQLLEECRRLGG 57
Query: 71 AQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNI 129
C G+A++T G+ L VIH VGPV+ ED +L Y+ L + N I
Sbjct: 58 ------CATGDAKMTKGYGLLAKGVIHAVGPVWRGGNQGEDELLARCYRRSLELAAENEI 111
Query: 130 QYIAFPAISCGV 141
+ IAFPAIS G+
Sbjct: 112 KSIAFPAISTGI 123
>gi|158317902|ref|YP_001510410.1| hypothetical protein Franean1_6160 [Frankia sp. EAN1pec]
gi|158113307|gb|ABW15504.1| Appr-1-p processing domain protein [Frankia sp. EAN1pec]
Length = 174
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
++++ +GDI+ VD AIV+ LL GG AIH A GPD+ AC ++
Sbjct: 3 TVRLVQGDITTQAVD----AIVNAAKSSLLGGGGVDGAIHAAGGPDILAACRRLRAGALP 58
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
P GEA T +L HVIHTVGPV H + +LRS Y L+V + +A
Sbjct: 59 GGLPVGEAVATTAGRLTAKHVIHTVGPVHTPHEDRSHLLRSCYARSLAVADEIGARTLAL 118
Query: 135 PAISCG 140
PA+S G
Sbjct: 119 PAVSAG 124
>gi|449542934|gb|EMD33911.1| hypothetical protein CERSUDRAFT_117441 [Ceriporiopsis subvermispora
B]
Length = 238
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 72/129 (55%), Gaps = 14/129 (10%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ + +GDI++ +D AIV+ N LL GG AIH AAGP L + C +
Sbjct: 40 ISLYQGDITKMELD----AIVNAANRSLLAGGGVDGAIHAAAGPRLLEECRTLHG----- 90
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF---NFHCNPEDILRSAYKNCLSVGKANNIQYI 132
C G ++IT G+ LP HVIHTVGPV+ E ++ S YK L + ++++++
Sbjct: 91 -CETGNSKITKGYDLPAGHVIHTVGPVYAKEKADMKAEQLV-SCYKTSLQLALEHSVKHV 148
Query: 133 AFPAISCGV 141
AFP+IS G+
Sbjct: 149 AFPSISTGI 157
>gi|384914612|ref|ZP_10015396.1| conserved hypothetical protein [Methylacidiphilum fumariolicum
SolV]
gi|384527497|emb|CCG91264.1| conserved hypothetical protein [Methylacidiphilum fumariolicum
SolV]
Length = 191
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 68/126 (53%), Gaps = 11/126 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+++ + DI+R VD AIV+ N L+ GG AIH AAGP L +AC ++
Sbjct: 10 IELIQDDITRLEVD----AIVNAANSRLMKGGGVDGAIHRAAGPKLAEACAKLN------ 59
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFH-CNPEDILRSAYKNCLSVGKANNIQYIAF 134
CP G A++TPGF L +IH VGPV+ N + +L S Y L K + +AF
Sbjct: 60 GCPTGHAKVTPGFNLKAKWIIHAVGPVWKGGVANEKALLASCYHQALLRAKEVEAKTVAF 119
Query: 135 PAISCG 140
PAIS G
Sbjct: 120 PAISTG 125
>gi|51858534|gb|AAH81655.1| Zgc:92353 [Danio rerio]
Length = 248
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 73/131 (55%), Gaps = 14/131 (10%)
Query: 15 SLKIS--KGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
++K+S GDI++ +D A+ + N+ LL GG AIH AGP L+K C +
Sbjct: 67 NMKVSLFGGDITKLEID----AVANAANKTLLGGGGVDGAIHRGAGPLLRKECATLNG-- 120
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHC--NPEDILRSAYKNCLSVGKANNIQ 130
C GEA+IT + LP +VIHTVGP+ + E+ LR+ Y NCL ++++
Sbjct: 121 ----CETGEAKITGAYGLPARYVIHTVGPIVHDSVGEREEEALRNCYYNCLHTATKHHLR 176
Query: 131 YIAFPAISCGV 141
+AFP IS GV
Sbjct: 177 TVAFPCISTGV 187
>gi|404257694|ref|ZP_10961018.1| hypothetical protein GONAM_09_00730 [Gordonia namibiensis NBRC
108229]
gi|403403767|dbj|GAB99427.1| hypothetical protein GONAM_09_00730 [Gordonia namibiensis NBRC
108229]
Length = 170
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
TS+ + +GDI+ +S DAIV+ N LL GG AIH GP + C ++ Q
Sbjct: 2 TSITLVQGDITL----QSVDAIVNAANSTLLGGGGVDGAIHRRGGPAILAECKELRAGQY 57
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
R P GEA T L VIHTVGPV ++ + + L S Y+ L V IA
Sbjct: 58 RRGLPVGEAVATTAGDLDARWVIHTVGPVHSYDEDRSEFLVSCYRESLRVADDLGATTIA 117
Query: 134 FPAISCGV 141
FPAIS GV
Sbjct: 118 FPAISTGV 125
>gi|289766303|ref|ZP_06525681.1| ATPase [Fusobacterium sp. D11]
gi|289717858|gb|EFD81870.1| ATPase [Fusobacterium sp. D11]
Length = 175
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 77/152 (50%), Gaps = 13/152 (8%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K +K+ GDI++ + IV+ N L +GG AI AAG DL K C +I
Sbjct: 3 KDIIKLVSGDITKVP---EVETIVNAANTSLEMGGGVCGAIFRAAGNDLTKECKEIG--- 56
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
C GEA IT G+ LP ++IHTVGP ++ N E + L SAY L + K I+
Sbjct: 57 ---GCNTGEAVITKGYNLPNKYIIHTVGPKYSTGENGEAERLASAYYKSLKLAKKKGIRK 113
Query: 132 IAFPAISCGVSQIMTH---AIKLQTNCGFLES 160
IAFP+IS G+ + I L T FL+
Sbjct: 114 IAFPSISTGIYRFPVDEGAEIALNTAIKFLDE 145
>gi|427739958|ref|YP_007059502.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Rivularia sp. PCC 7116]
gi|427374999|gb|AFY58955.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Rivularia sp. PCC 7116]
Length = 552
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 85/171 (49%), Gaps = 16/171 (9%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
+ L I KGD+ + +S DAIV+PTN +L+ G + IH AAG +L++A +
Sbjct: 29 RNRLSIIKGDL----ITQSVDAIVNPTNNVLIAAGL-CSNIHRAAGENLRRAVSSVK--- 80
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE--DILRSAYKNCLSVGKANNIQ 130
+A ITPGF+L SHVIHT P++ + E + LR Y+NCL + N IQ
Sbjct: 81 ---WLDVSKAIITPGFRLLSSHVIHTCAPIWQKERSQESGEELRVCYRNCLEIAAENQIQ 137
Query: 131 YIAFPAISC---GVSQIMTHAIKLQTNCGFLESFWVELSAKVTTYDMDLIE 178
+AFP I G + I L+ +L + + K+ Y + E
Sbjct: 138 TLAFPCIGTRLRGFPKDWAARIALKEIISYLAEHPLPMQVKIVCYQSEDYE 188
>gi|403525804|ref|YP_006660691.1| hypothetical protein ARUE_c07200 [Arthrobacter sp. Rue61a]
gi|403228231|gb|AFR27653.1| UPF0189 protein in non 5'region [Arthrobacter sp. Rue61a]
Length = 183
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 67/128 (52%), Gaps = 8/128 (6%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ I GDI+ RS D IV+ N LL GG AIH AAG +L +AC ++ +
Sbjct: 3 IDILHGDIT----TRSVDVIVNAANSSLLGGGGVDGAIHRAAGSELLEACRELRRTELPE 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED--ILRSAYKNCLSVGKANNIQYIA 133
P G A TP F+LP VIHTVGP N H D +L S ++ L V + +A
Sbjct: 59 GLPVGAAVATPAFRLPAHWVIHTVGP--NRHAGQTDPALLASCFRESLKVAAGLGARSLA 116
Query: 134 FPAISCGV 141
FPAIS G+
Sbjct: 117 FPAISAGI 124
>gi|148227060|ref|NP_001013824.2| O-acetyl-ADP-ribose deacetylase MACROD2 isoform 1 [Mus musculus]
gi|123788758|sp|Q3UYG8.1|MACD2_MOUSE RecName: Full=O-acetyl-ADP-ribose deacetylase MACROD2; AltName:
Full=MACRO domain-containing protein 2
gi|74145202|dbj|BAE22244.1| unnamed protein product [Mus musculus]
Length = 475
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 73/135 (54%), Gaps = 14/135 (10%)
Query: 9 SFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQI 68
S S K SL +GDI+ VD AIV+ N LL GG IH AAGP L C +
Sbjct: 67 SLSEKVSL--YRGDITLLEVD----AIVNAANASLLGGGGVDGCIHRAAGPCLLAECRNL 120
Query: 69 PEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNP--EDILRSAYKNCLSVGKA 126
C G A+IT G+ LP +VIHTVGP+ H N ++ L + Y++ L + K
Sbjct: 121 ------NGCETGHAKITCGYDLPAKYVIHTVGPIARGHINGSHKEDLANCYQSSLKLVKE 174
Query: 127 NNIQYIAFPAISCGV 141
NN++ +AFP IS G+
Sbjct: 175 NNLRSVAFPCISTGI 189
>gi|186475040|ref|YP_001856510.1| appr-1-p processing domain-containing protein [Burkholderia
phymatum STM815]
gi|184191499|gb|ACC69464.1| Appr-1-p processing domain protein [Burkholderia phymatum STM815]
Length = 183
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 62/110 (56%), Gaps = 7/110 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DA+V+ N LL GG A+H AAG DL + C + C G+A+IT G +L
Sbjct: 22 DAVVNAANTSLLGGGGVDGALHRAAGADLLRECQTLGG------CVTGDAKITGGHRLKA 75
Query: 93 SHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
HVIH VGPV++ E ++L S Y+ L + + + IAFPAISCGV
Sbjct: 76 RHVIHAVGPVWHGGGRGEAELLASCYRRSLELARDAKAKSIAFPAISCGV 125
>gi|212693219|ref|ZP_03301347.1| hypothetical protein BACDOR_02729 [Bacteroides dorei DSM 17855]
gi|345515425|ref|ZP_08794927.1| hypothetical protein BSEG_02278 [Bacteroides dorei 5_1_36/D4]
gi|423231457|ref|ZP_17217860.1| hypothetical protein HMPREF1063_03680 [Bacteroides dorei
CL02T00C15]
gi|423246044|ref|ZP_17227117.1| hypothetical protein HMPREF1064_03323 [Bacteroides dorei
CL02T12C06]
gi|212664324|gb|EEB24896.1| macro domain protein [Bacteroides dorei DSM 17855]
gi|345455736|gb|EEO46137.2| hypothetical protein BSEG_02278 [Bacteroides dorei 5_1_36/D4]
gi|392627087|gb|EIY21126.1| hypothetical protein HMPREF1063_03680 [Bacteroides dorei
CL02T00C15]
gi|392637029|gb|EIY30905.1| hypothetical protein HMPREF1064_03323 [Bacteroides dorei
CL02T12C06]
Length = 208
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 61/110 (55%), Gaps = 7/110 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAGP L C + CP GE++IT + LP
Sbjct: 58 DAIVNAANSSLLGGGGVDGAIHRAAGPALLAECKTLG------GCPTGESKITDAYNLPC 111
Query: 93 SHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
VIHTVGPV++ + E + L S Y+ + + N IQ IAFP IS GV
Sbjct: 112 RKVIHTVGPVWHGGTHGEAEKLASCYRTSFILARENGIQSIAFPCISTGV 161
>gi|334119271|ref|ZP_08493357.1| Appr-1-p processing domain protein [Microcoleus vaginatus FGP-2]
gi|333458059|gb|EGK86678.1| Appr-1-p processing domain protein [Microcoleus vaginatus FGP-2]
Length = 169
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 71/130 (54%), Gaps = 13/130 (10%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+K+ GDI++ VD AIV+ N LL GG AIH+AAG +L C +
Sbjct: 1 MKVILGDITKLEVD----AIVNAANTSLLGGGGVDGAIHQAAGSELLHECRLLG------ 50
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNF--HCNPEDILRSAYKNCLSVGKANNIQYIA 133
C G+A++T G+ LP +IHTVGPV+ H PE +L Y+ C+ + ++ +A
Sbjct: 51 GCKIGDAKLTKGYNLPARFIIHTVGPVWRGGNHGEPE-LLAECYRKCMQIAAEQELESLA 109
Query: 134 FPAISCGVSQ 143
FP IS G+ Q
Sbjct: 110 FPCISTGIYQ 119
>gi|156934469|ref|YP_001438385.1| hypothetical protein ESA_02300 [Cronobacter sakazakii ATCC BAA-894]
gi|334351227|sp|A7MG20.1|YMDB_ENTS8 RecName: Full=O-acetyl-ADP-ribose deacetylase; AltName:
Full=Regulator of RNase III activity
gi|156532723|gb|ABU77549.1| hypothetical protein ESA_02300 [Cronobacter sakazakii ATCC BAA-894]
Length = 180
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 67/127 (52%), Gaps = 7/127 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ + +GDI+ VD IV+ N L+ GG AIH AAGP L AC Q+ + Q
Sbjct: 5 INVVQGDITLIDVD----VIVNAANPSLMGGGGVDGAIHRAAGPALLAACRQVRQQQG-- 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C PG A IT L V+HTVGPV+ N +L AY+N L + AN +AF
Sbjct: 59 ECQPGHAVITEAGDLAAKAVVHTVGPVWRGGQDNEPQLLADAYRNSLQLVAANGYNSVAF 118
Query: 135 PAISCGV 141
PAIS G+
Sbjct: 119 PAISTGI 125
>gi|238062429|ref|ZP_04607138.1| appr-1-p processing domain-containing protein [Micromonospora sp.
ATCC 39149]
gi|237884240|gb|EEP73068.1| appr-1-p processing domain-containing protein [Micromonospora sp.
ATCC 39149]
Length = 169
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 70/129 (54%), Gaps = 13/129 (10%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++I GDI+R VD AIV+ NE LL GG A+H AAG L +A I
Sbjct: 4 IEIVMGDITRENVD----AIVTAANESLLGGGGVDGAVHRAAGSRLAQAGGAIGP----- 54
Query: 76 RCPPGEARITPGFKL--PVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
C PG+A TP F L PV H+IH VGP++ + E D+L S Y+ L V + +
Sbjct: 55 -CKPGDAMATPAFDLDPPVRHIIHAVGPIWEGGGHGEADVLASCYRRSLQVADELCARSV 113
Query: 133 AFPAISCGV 141
AFPAI+ GV
Sbjct: 114 AFPAIATGV 122
>gi|225024912|ref|ZP_03714104.1| hypothetical protein EIKCOROL_01800 [Eikenella corrodens ATCC
23834]
gi|224942316|gb|EEG23525.1| hypothetical protein EIKCOROL_01800 [Eikenella corrodens ATCC
23834]
Length = 197
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 77/141 (54%), Gaps = 16/141 (11%)
Query: 7 TLSFSTK-----TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDL 61
+LSF TK +L++ + DI+ VD AIV+ N LL GG AIH AAGP+L
Sbjct: 18 SLSFKTKETDMTATLEVCQADITTLAVD----AIVNAANSSLLGGGGVDGAIHRAAGPEL 73
Query: 62 QKACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNC 120
C ++ C GEA+IT G++LP V+HTVGPV+ + E +L +AY N
Sbjct: 74 LAECRRLGG------CRTGEAKITRGYRLPARWVVHTVGPVWRGGQHGEAALLAAAYANS 127
Query: 121 LSVGKANNIQYIAFPAISCGV 141
L + Q IAFP IS GV
Sbjct: 128 LRLAAEQGAQSIAFPCISTGV 148
>gi|237709962|ref|ZP_04540443.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|265753613|ref|ZP_06088968.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|423238424|ref|ZP_17219540.1| hypothetical protein HMPREF1065_00163 [Bacteroides dorei
CL03T12C01]
gi|229456055|gb|EEO61776.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|263235327|gb|EEZ20851.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|392648107|gb|EIY41797.1| hypothetical protein HMPREF1065_00163 [Bacteroides dorei
CL03T12C01]
Length = 167
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 61/110 (55%), Gaps = 7/110 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAGP L C + CP GE++IT + LP
Sbjct: 17 DAIVNAANSSLLGGGGVDGAIHRAAGPALLAECKTLG------GCPTGESKITDAYNLPC 70
Query: 93 SHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
VIHTVGPV++ + E + L S Y+ + + N IQ IAFP IS GV
Sbjct: 71 RKVIHTVGPVWHGGTHGEAEKLASCYRTSFILARENGIQSIAFPCISTGV 120
>gi|410913601|ref|XP_003970277.1| PREDICTED: O-acetyl-ADP-ribose deacetylase MACROD1-like [Takifugu
rubripes]
Length = 360
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 69/128 (53%), Gaps = 12/128 (9%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ + GDI++ +D AIV+ N LL GG AIH AAGP L K C +
Sbjct: 182 ISLYSGDITKLEID----AIVNAANRTLLGGGGVDGAIHRAAGPMLVKECASLQG----- 232
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCN--PEDILRSAYKNCLSVGKANNIQYIA 133
C G+A+IT G+ LP +VIHTVGP+ ++ LRS Y+N L+ + + +A
Sbjct: 233 -CETGQAKITCGYGLPAKYVIHTVGPIAQGRVGEVEKEALRSCYRNSLNAATQHAARSVA 291
Query: 134 FPAISCGV 141
FP IS G+
Sbjct: 292 FPCISTGI 299
>gi|392944940|ref|ZP_10310582.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Frankia sp. QA3]
gi|392288234|gb|EIV94258.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Frankia sp. QA3]
Length = 174
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ + +GDI+ +DAIV+ N LL GG AIH A GP++ AC ++
Sbjct: 4 VTLQQGDITLI----EADAIVNAANSALLGGGGVDGAIHAAGGPEILAACRRLRATSLPR 59
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFP 135
P GEA T +L HVIH VGPV++ + +LRSAY L V +AFP
Sbjct: 60 GLPTGEAVATTAGRLAARHVIHVVGPVYDPAEDRSALLRSAYTRALRVADELGATSVAFP 119
Query: 136 AISCGV 141
A+S GV
Sbjct: 120 AVSAGV 125
>gi|306833278|ref|ZP_07466407.1| appr-1-p processing enzyme family domain protein [Streptococcus
bovis ATCC 700338]
gi|336064072|ref|YP_004558931.1| macro domain-containing protein [Streptococcus pasteurianus ATCC
43144]
gi|304424645|gb|EFM27782.1| appr-1-p processing enzyme family domain protein [Streptococcus
bovis ATCC 700338]
gi|334282272|dbj|BAK29845.1| macro domain-containing protein [Streptococcus pasteurianus ATCC
43144]
Length = 260
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 83/159 (52%), Gaps = 16/159 (10%)
Query: 12 TKTSLKISKGDISRWCVDRSSDAIVSPTNEILL-----LGGFTAAAIHEAAGPDLQKACY 66
T L + KGDI+R VD AIV+ N +L L T IH AG L+ CY
Sbjct: 81 TDDRLYVWKGDITRLKVD----AIVNTANRRMLGCFQPLHDCTDNTIHTYAGVQLRLDCY 136
Query: 67 QIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNP--EDILRSAYKNCLSVG 124
++ + Q P G A+ITP + LP V+HTV P N H P ED+L +Y +CL++
Sbjct: 137 KLIQEQGHDE-PTGTAKITPAYNLPAKFVLHTVSPAINEHLTPIDEDLLAKSYLSCLTLA 195
Query: 125 KANNIQYIAFPAISCG--VSQIMTHA--IKLQTNCGFLE 159
+ N+++ +A +++ V I +A I +QT FLE
Sbjct: 196 EKNHLESVALSSLATDDEVHFINENAARIAIQTAKDFLE 234
>gi|182412092|ref|YP_001817158.1| appr-1-p processing domain-containing protein [Opitutus terrae
PB90-1]
gi|177839306|gb|ACB73558.1| Appr-1-p processing domain protein [Opitutus terrae PB90-1]
Length = 184
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 71/127 (55%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
LK+ +GDI+ VD AIV+ N LL GG AIH AAGP+L C +
Sbjct: 9 LKVVQGDITTLTVD----AIVNAANSSLLGGGGVDGAIHRAAGPELLAECRTLGG----- 59
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
C G+A+I+ G++LP HVIHTVGPV+ E ++L S Y+ L + A I +AF
Sbjct: 60 -CATGDAKISRGYRLPARHVIHTVGPVWRGGAAGEAELLASCYRRSLELAAAAGIATVAF 118
Query: 135 PAISCGV 141
P IS GV
Sbjct: 119 PCISTGV 125
>gi|428226023|ref|YP_007110120.1| Appr-1-p processing protein [Geitlerinema sp. PCC 7407]
gi|427985924|gb|AFY67068.1| Appr-1-p processing domain protein [Geitlerinema sp. PCC 7407]
Length = 586
Score = 82.8 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 49/121 (40%), Positives = 68/121 (56%), Gaps = 11/121 (9%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPG 80
GDI++ + DAIV+ + L G + AIH AAGP+L AC ++ CP G
Sbjct: 424 GDITQ----QELDAIVNSADRFLSDSGVVSRAIHRAAGPELLVACQELGG------CPVG 473
Query: 81 EARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISC 139
EA++TPGF+L VIHTV P + E +IL Y++CL + A +Q IAFPA+
Sbjct: 474 EAKLTPGFQLRSPWVIHTVCPEWQGGDRQETEILAQCYRSCLELAAAKGLQSIAFPALGV 533
Query: 140 G 140
G
Sbjct: 534 G 534
>gi|429108306|ref|ZP_19170175.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Cronobacter malonaticus 681]
gi|426295029|emb|CCJ96288.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Cronobacter malonaticus 681]
Length = 180
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 67/127 (52%), Gaps = 7/127 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ + +GDI+R VD IV+ N L+ GG AIH AAGP L AC + + Q
Sbjct: 5 INVVQGDITRIDVD----VIVNAANPSLMGGGGVDGAIHRAAGPALLAACKVVRQQQG-- 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C PG A IT L V+HTVGPV+ N +L AY+N L + AN +AF
Sbjct: 59 ECQPGHAVITEAGNLAAKAVVHTVGPVWRGGQDNEPQLLADAYRNSLQLVAANGYSSVAF 118
Query: 135 PAISCGV 141
PAIS G+
Sbjct: 119 PAISTGI 125
>gi|421747650|ref|ZP_16185339.1| hypothetical protein B551_13348 [Cupriavidus necator HPC(L)]
gi|409773715|gb|EKN55459.1| hypothetical protein B551_13348 [Cupriavidus necator HPC(L)]
Length = 178
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 74/127 (58%), Gaps = 7/127 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L++ GDI+R VD AIV+ N LL GG AIH A GP + AC +I + Q
Sbjct: 6 LQVVHGDITRLEVD----AIVNAANSGLLGGGGVDGAIHGAGGPAIMAACREIRDRQGG- 60
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAF 134
CP GEA IT G LP +VIH VGPV+ + ED +L SAY++ + + + ++ +AF
Sbjct: 61 -CPTGEAVITTGGLLPAPYVIHAVGPVWRGGNDNEDALLASAYRSSIKLAAEHRLRTLAF 119
Query: 135 PAISCGV 141
P IS GV
Sbjct: 120 PNISTGV 126
>gi|160938063|ref|ZP_02085420.1| hypothetical protein CLOBOL_02957 [Clostridium bolteae ATCC
BAA-613]
gi|158439057|gb|EDP16812.1| hypothetical protein CLOBOL_02957 [Clostridium bolteae ATCC
BAA-613]
Length = 176
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 67/122 (54%), Gaps = 10/122 (8%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPG 80
GDI++ DAIV+ N LL GG AIH AAG +L C + C G
Sbjct: 14 GDITKIT---GMDAIVNAANSSLLGGGGVDGAIHRAAGKELLHECRLLGG------CKTG 64
Query: 81 EARITPGFKLPVSHVIHTVGPVFNFH-CNPEDILRSAYKNCLSVGKANNIQYIAFPAISC 139
+A+IT + L ++IHTVGPV+N C ++ L S Y+N L + N ++ IAFP++S
Sbjct: 65 QAKITKAYNLECRYIIHTVGPVWNGGTCGEQEKLASCYRNSLLLALENGVKRIAFPSVST 124
Query: 140 GV 141
G+
Sbjct: 125 GI 126
>gi|161621800|ref|YP_055119.2| hypothetical protein PPA0410 [Propionibacterium acnes KPA171202]
gi|289424456|ref|ZP_06426239.1| macro domain protein [Propionibacterium acnes SK187]
gi|289426677|ref|ZP_06428406.1| macro domain protein [Propionibacterium acnes J165]
gi|295129965|ref|YP_003580628.1| macro domain protein [Propionibacterium acnes SK137]
gi|335052569|ref|ZP_08545449.1| macro domain protein [Propionibacterium sp. 409-HC1]
gi|335055006|ref|ZP_08547801.1| macro domain protein [Propionibacterium sp. 434-HC2]
gi|342212313|ref|ZP_08705038.1| macro domain protein [Propionibacterium sp. CC003-HC2]
gi|354606372|ref|ZP_09024343.1| hypothetical protein HMPREF1003_00910 [Propionibacterium sp.
5_U_42AFAA]
gi|386023351|ref|YP_005941654.1| hypothetical protein PAZ_c04230 [Propionibacterium acnes 266]
gi|387502777|ref|YP_005944006.1| RNase III inhibitor [Propionibacterium acnes 6609]
gi|407934782|ref|YP_006850424.1| RNase III inhibitor [Propionibacterium acnes C1]
gi|417931075|ref|ZP_12574448.1| macro domain protein [Propionibacterium acnes SK182]
gi|419420621|ref|ZP_13960850.1| RNase III inhibitor [Propionibacterium acnes PRP-38]
gi|422384393|ref|ZP_16464534.1| RNase III regulator YmdB [Propionibacterium acnes HL096PA3]
gi|422387242|ref|ZP_16467359.1| RNase III regulator YmdB [Propionibacterium acnes HL096PA2]
gi|422392041|ref|ZP_16472115.1| RNase III regulator YmdB [Propionibacterium acnes HL099PA1]
gi|422395093|ref|ZP_16475134.1| RNase III regulator YmdB [Propionibacterium acnes HL097PA1]
gi|422424961|ref|ZP_16501907.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL043PA1]
gi|422428999|ref|ZP_16505904.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL072PA2]
gi|422436696|ref|ZP_16513543.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL092PA1]
gi|422447545|ref|ZP_16524277.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL036PA3]
gi|422456488|ref|ZP_16533152.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL030PA1]
gi|422460492|ref|ZP_16537126.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL038PA1]
gi|422473987|ref|ZP_16550457.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL056PA1]
gi|422476713|ref|ZP_16553152.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL007PA1]
gi|422479634|ref|ZP_16556044.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL063PA1]
gi|422481602|ref|ZP_16558001.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL036PA1]
gi|422484137|ref|ZP_16560516.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL043PA2]
gi|422487675|ref|ZP_16564006.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL013PA2]
gi|422489122|ref|ZP_16565449.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL020PA1]
gi|422491699|ref|ZP_16568010.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL086PA1]
gi|422494221|ref|ZP_16570516.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL025PA1]
gi|422497943|ref|ZP_16574216.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL002PA3]
gi|422504168|ref|ZP_16580405.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL027PA2]
gi|422504871|ref|ZP_16581105.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL036PA2]
gi|422514332|ref|ZP_16590453.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL087PA2]
gi|422515552|ref|ZP_16591664.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL110PA2]
gi|422518122|ref|ZP_16594194.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL074PA1]
gi|422520769|ref|ZP_16596811.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL045PA1]
gi|422523700|ref|ZP_16599712.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL053PA2]
gi|422526259|ref|ZP_16602258.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL083PA1]
gi|422528429|ref|ZP_16604411.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL053PA1]
gi|422531356|ref|ZP_16607304.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL110PA1]
gi|422535279|ref|ZP_16611202.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL072PA1]
gi|422535886|ref|ZP_16611794.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL078PA1]
gi|422543708|ref|ZP_16619548.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL082PA1]
gi|422559077|ref|ZP_16634805.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL005PA1]
gi|422567690|ref|ZP_16643316.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL002PA2]
gi|289155153|gb|EFD03835.1| macro domain protein [Propionibacterium acnes SK187]
gi|289160172|gb|EFD08347.1| macro domain protein [Propionibacterium acnes J165]
gi|291375914|gb|ADD99768.1| macro domain protein [Propionibacterium acnes SK137]
gi|313772956|gb|EFS38922.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL074PA1]
gi|313793021|gb|EFS41088.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL110PA1]
gi|313802530|gb|EFS43752.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL110PA2]
gi|313806545|gb|EFS45052.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL087PA2]
gi|313811092|gb|EFS48806.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL083PA1]
gi|313814406|gb|EFS52120.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL025PA1]
gi|313821845|gb|EFS59559.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL036PA1]
gi|313824261|gb|EFS61975.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL036PA2]
gi|313826625|gb|EFS64339.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL063PA1]
gi|313831858|gb|EFS69572.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL007PA1]
gi|313834600|gb|EFS72314.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL056PA1]
gi|313840169|gb|EFS77883.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL086PA1]
gi|314926659|gb|EFS90490.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL036PA3]
gi|314961137|gb|EFT05238.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL002PA2]
gi|314964437|gb|EFT08537.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL082PA1]
gi|314974601|gb|EFT18696.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL053PA1]
gi|314977206|gb|EFT21301.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL045PA1]
gi|314980382|gb|EFT24476.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL072PA2]
gi|314985696|gb|EFT29788.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL005PA1]
gi|315078550|gb|EFT50581.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL053PA2]
gi|315081986|gb|EFT53962.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL078PA1]
gi|315082517|gb|EFT54493.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL027PA2]
gi|315086229|gb|EFT58205.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL002PA3]
gi|315087812|gb|EFT59788.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL072PA1]
gi|315097437|gb|EFT69413.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL038PA1]
gi|315106445|gb|EFT78421.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL030PA1]
gi|327331478|gb|EGE73217.1| RNase III regulator YmdB [Propionibacterium acnes HL096PA2]
gi|327333465|gb|EGE75185.1| RNase III regulator YmdB [Propionibacterium acnes HL096PA3]
gi|327334991|gb|EGE76702.1| RNase III regulator YmdB [Propionibacterium acnes HL097PA1]
gi|327445512|gb|EGE92166.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL013PA2]
gi|327447132|gb|EGE93786.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL043PA1]
gi|327449833|gb|EGE96487.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL043PA2]
gi|327456974|gb|EGF03629.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL092PA1]
gi|328758755|gb|EGF72371.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL020PA1]
gi|328761821|gb|EGF75334.1| RNase III regulator YmdB [Propionibacterium acnes HL099PA1]
gi|332674807|gb|AEE71623.1| hypothetical protein PAZ_c04230 [Propionibacterium acnes 266]
gi|333763153|gb|EGL40617.1| macro domain protein [Propionibacterium sp. 434-HC2]
gi|333763340|gb|EGL40798.1| macro domain protein [Propionibacterium sp. 409-HC1]
gi|335276822|gb|AEH28727.1| RNase III inhibitor [Propionibacterium acnes 6609]
gi|340767857|gb|EGR90382.1| macro domain protein [Propionibacterium sp. CC003-HC2]
gi|340769398|gb|EGR91922.1| macro domain protein [Propionibacterium acnes SK182]
gi|353557779|gb|EHC27147.1| hypothetical protein HMPREF1003_00910 [Propionibacterium sp.
5_U_42AFAA]
gi|379978995|gb|EIA12319.1| RNase III inhibitor [Propionibacterium acnes PRP-38]
gi|407903363|gb|AFU40193.1| RNase III inhibitor [Propionibacterium acnes C1]
gi|456740323|gb|EMF64850.1| RNase III inhibitor [Propionibacterium acnes FZ1/2/0]
Length = 171
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 58/109 (53%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DA+V+ N L GG AIH AAGP+L +AC ++ E P G++ T K+P
Sbjct: 17 DAVVNAANRQLAGGGGVDGAIHRAAGPELSQACRKLRETTLTDGLPTGQSVATTAGKMPA 76
Query: 93 SHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
VIHTVGPV+ + D L S Y+ L V + IAFP IS GV
Sbjct: 77 KWVIHTVGPVWAKTIDKSDQLASCYRTSLHVADEIGARTIAFPTISAGV 125
>gi|213963141|ref|ZP_03391399.1| appr-1-p processing enzyme family protein [Capnocytophaga sputigena
Capno]
gi|213954225|gb|EEB65549.1| appr-1-p processing enzyme family protein [Capnocytophaga sputigena
Capno]
Length = 174
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 75/145 (51%), Gaps = 15/145 (10%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
++++I GDI++ VD AIV+ N LL GG AIH+A G L + C +I Q
Sbjct: 4 SNIEIVLGDITKISVD----AIVNAANTSLLGGGGVDGAIHKAGGKALTEECEKIRNKQG 59
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHC-NPEDILRSAYKNCLSVGKANNIQYI 132
C G A IT LP +VIHTVGPV+N N E++L Y +CL + + + I
Sbjct: 60 G--CKVGSAVITTAGNLPAKYVIHTVGPVWNGGTHNEENLLAQVYISCLELALEHQVATI 117
Query: 133 AFPAISCG--------VSQIMTHAI 149
+FP IS G +QI H I
Sbjct: 118 SFPNISTGRYRFPKEKAAQIALHTI 142
>gi|171912917|ref|ZP_02928387.1| hypothetical protein VspiD_17095 [Verrucomicrobium spinosum DSM
4136]
Length = 180
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 82/159 (51%), Gaps = 17/159 (10%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAGP+L C + C G+A++T G++LP
Sbjct: 18 DAIVNAANSSLLGGGGVDGAIHRAAGPELLNQCRLLGG------CKTGDAKLTMGYQLPA 71
Query: 93 SHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCGV--------SQ 143
VIHTVGPV+ E ++L S Y+ L + +N ++ IAFP IS G+ ++
Sbjct: 72 KFVIHTVGPVWRGGQEGEPELLASCYRLSLRLASSNGVRTIAFPCISTGIYGYPVELAAE 131
Query: 144 IMTHAIKLQT--NCGFLESFWVELSAKVTTYDMDLIETA 180
I H + ++ + G E + SA+ L+ET+
Sbjct: 132 IALHIAREESTRDTGIEEILFCCFSARDLKVYTRLLETS 170
>gi|429753083|ref|ZP_19285905.1| macro domain protein [Capnocytophaga sp. oral taxon 326 str. F0382]
gi|429174847|gb|EKY16314.1| macro domain protein [Capnocytophaga sp. oral taxon 326 str. F0382]
Length = 174
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 75/145 (51%), Gaps = 15/145 (10%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
++++I GDI++ VD AIV+ N LL GG AIH+A G L + C +I Q
Sbjct: 4 SNIEIVLGDITKISVD----AIVNAANTSLLGGGGVDGAIHKAGGKALTEECEKIRNKQG 59
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHC-NPEDILRSAYKNCLSVGKANNIQYI 132
C G A IT LP +VIHTVGPV+N N E++L Y +CL + + + I
Sbjct: 60 G--CKVGSAVITTAGNLPAKYVIHTVGPVWNGGTHNEENLLAQVYISCLELALEHQVATI 117
Query: 133 AFPAISCG--------VSQIMTHAI 149
+FP IS G +QI H I
Sbjct: 118 SFPNISTGRYRFPKEKAAQIALHTI 142
>gi|353234480|emb|CCA66505.1| related to LRP16 protein [Piriformospora indica DSM 11827]
Length = 328
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 71/126 (56%), Gaps = 16/126 (12%)
Query: 20 KGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPP 79
+GDI+R VD AIV+ N LL GG AIH+AAG L K C + A
Sbjct: 60 QGDITRLEVD----AIVNAANRSLLGGGGVDGAIHQAAGSGLLKECRTLGGADT------ 109
Query: 80 GEARITPGFKLPVSHVIHTVGPVFNFHCNPEDI----LRSAYKNCLSVGKANNIQYIAFP 135
G+A+IT G+KLP HVIH VGP+++ + DI L + Y+N + + AN + IAF
Sbjct: 110 GDAKITGGYKLPSKHVIHAVGPIYS--SSERDIKAAQLEACYENSIDLAIANKLSSIAFC 167
Query: 136 AISCGV 141
+IS G+
Sbjct: 168 SISTGI 173
>gi|339325702|ref|YP_004685395.1| phosphatase-like protein [Cupriavidus necator N-1]
gi|338165859|gb|AEI76914.1| phosphatase-like protein [Cupriavidus necator N-1]
Length = 173
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 75/127 (59%), Gaps = 7/127 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L++ GDI+R VD AIV+ N LL GG AIH A G +++AC I +AQ
Sbjct: 6 LQVVHGDITRMEVD----AIVNAANSGLLGGGGVDGAIHGAGGSAIKEACRAIRDAQGG- 60
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAF 134
CP GEA IT G LP +VIH VGPV+ ED +L +AY+N + + ++++ +AF
Sbjct: 61 -CPTGEAVITTGGHLPAPYVIHAVGPVWQGGDQGEDELLANAYRNSIRLAAQHHLRRLAF 119
Query: 135 PAISCGV 141
P IS G+
Sbjct: 120 PNISTGI 126
>gi|41054553|ref|NP_956843.1| MACRO domain-containing protein 2 [Danio rerio]
gi|33989713|gb|AAH56529.1| Zgc:65960 [Danio rerio]
Length = 452
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 75/138 (54%), Gaps = 14/138 (10%)
Query: 6 QTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKAC 65
Q+ S + K SL KGDI+ +D AIV+ N LL GG IH AAG L + C
Sbjct: 55 QSSSLADKVSL--YKGDITILEID----AIVNAANSSLLGGGGVDGCIHRAAGHLLYEEC 108
Query: 66 YQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVF--NFHCNPEDILRSAYKNCLSV 123
+ + C G+A+IT G+ LP +VIHTVGP+ N + D L S Y + L +
Sbjct: 109 HSL------NGCDTGKAKITCGYDLPAKYVIHTVGPIARGNVGQSQRDDLESCYYSSLKL 162
Query: 124 GKANNIQYIAFPAISCGV 141
K NN++ +AFP IS G+
Sbjct: 163 MKDNNLRSVAFPCISTGI 180
>gi|114319583|ref|YP_741266.1| appr-1-p processing domain-containing protein [Alkalilimnicola
ehrlichii MLHE-1]
gi|114225977|gb|ABI55776.1| Appr-1-p processing domain protein [Alkalilimnicola ehrlichii
MLHE-1]
Length = 177
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 69/127 (54%), Gaps = 9/127 (7%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
++ +GDI+ DA+V+ N L+ GG A A+H AAGP L + C P
Sbjct: 6 VEVECQQGDIATQV---GMDAVVNAANAQLMPGGGVAGALHRAAGPGLAEEC------AP 56
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
PG+A IT G +LP VIHT+GPV+ E++L + Y+N L + + ++ +A
Sbjct: 57 LAPINPGQAVITSGHELPNPFVIHTLGPVYGVDEPAEELLAACYRNSLQRAEESELRSVA 116
Query: 134 FPAISCG 140
FPAIS G
Sbjct: 117 FPAISTG 123
>gi|422509351|ref|ZP_16585509.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL046PA2]
gi|313817412|gb|EFS55126.1| putative RNase III regulator YmdB [Propionibacterium acnes
HL046PA2]
Length = 171
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 58/109 (53%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DA+V+ N L GG AIH AAGP+L +AC ++ E P G++ T K+P
Sbjct: 17 DAVVNAANRQLAGGGGVDGAIHRAAGPELSQACRKLRETALTDGLPTGQSVATTAGKMPA 76
Query: 93 SHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
VIHTVGPV+ + D L S Y+ L V + IAFP IS GV
Sbjct: 77 KWVIHTVGPVWAKTIDKSDQLASCYRTSLHVADEIGARTIAFPTISAGV 125
>gi|289522731|ref|ZP_06439585.1| RNase III regulator YmdB [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289504567|gb|EFD25731.1| RNase III regulator YmdB [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 175
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 66/123 (53%), Gaps = 11/123 (8%)
Query: 20 KGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPP 79
KGDI+R A+V+ N L GG A AIH AAGP+L K C +P P
Sbjct: 14 KGDITR---QPDVTAVVNAANAWLRPGGGVAGAIHHAAGPELDKEC------RPLAPIKP 64
Query: 80 GEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAFPAIS 138
G+A IT G LP +VIH +GP + PED +L Y+N L + + I IAFPAIS
Sbjct: 65 GQAVITGGHNLPNKYVIHCLGPRYGVD-KPEDRLLADCYRNALKLADEHKIDSIAFPAIS 123
Query: 139 CGV 141
GV
Sbjct: 124 TGV 126
>gi|194289587|ref|YP_002005494.1| hypothetical protein RALTA_A1478 [Cupriavidus taiwanensis LMG
19424]
gi|193223422|emb|CAQ69427.1| conserved hypothetical protein, high-affinity ADP-ribose binding
domain [Cupriavidus taiwanensis LMG 19424]
Length = 173
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 75/127 (59%), Gaps = 7/127 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L++ GDI+R VD AIV+ N LL GG AIH A GP + +AC I +AQ
Sbjct: 6 LQVVHGDITRMEVD----AIVNAANSGLLGGGGVDGAIHGAGGPAIMEACRAIRDAQGG- 60
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDI-LRSAYKNCLSVGKANNIQYIAF 134
CP GEA +T G +LP +VIH VGPV+ E+ L +AY+N + + ++++ +AF
Sbjct: 61 -CPTGEAVLTTGGRLPAPYVIHAVGPVWQGGGQGEEAQLANAYRNSIRLAAQHHLRTLAF 119
Query: 135 PAISCGV 141
P IS G+
Sbjct: 120 PNISTGI 126
>gi|320166899|gb|EFW43798.1| UPF0189 protein [Capsaspora owczarzaki ATCC 30864]
Length = 1991
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 79/144 (54%), Gaps = 17/144 (11%)
Query: 7 TLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTN-EILLLGGFTAAAIHEAAGPDLQKAC 65
T++ + S+ I +GDI++W D +V+ N ++ LGG IHEAAGP+L ++C
Sbjct: 15 TVTSNPLVSVVIQRGDITKWV----GDVVVNAANPQLTALGGLNGV-IHEAAGPELLRSC 69
Query: 66 Y-QIPEAQPRVRCPPGEARITPG---FKLPVSHVIHTVGPVFNFH---CNPE--DILRSA 116
IP + VRCPPG+A +T G +L SHVIH VGP N H P ++L+SA
Sbjct: 70 QINIPLNEQGVRCPPGDAVLTLGPFSPRLGASHVIHAVGP--NLHDPSMQPRAAELLKSA 127
Query: 117 YKNCLSVGKANNIQYIAFPAISCG 140
L + IA PAISCG
Sbjct: 128 ILRALHLADDLGCMSIAIPAISCG 151
>gi|407042466|gb|EKE41339.1| macro domain containing protein [Entamoeba nuttalli P19]
Length = 610
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 79/152 (51%), Gaps = 20/152 (13%)
Query: 1 MTFKVQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFT------AAAIH 54
+T K Q SF L + KGDI++ VD AIV+ N LLG F AIH
Sbjct: 102 ITLKEQGHSFLFSDKLALWKGDITKLGVD----AIVNAANN-QLLGCFVPHHLCIDNAIH 156
Query: 55 EAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVF-----NFHCNP 109
AGP L++ C I Q P G A++T + LP +VIHTVGP+ HCN
Sbjct: 157 TFAGPQLRRDCSIIMNKQG-FEEPTGYAKVTRAYNLPSKYVIHTVGPIVESQLKESHCN- 214
Query: 110 EDILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
+LRS+Y NCL++ +++ IAF IS G+
Sbjct: 215 --LLRSSYINCLNIADDLHLESIAFSCISTGL 244
>gi|159479538|ref|XP_001697847.1| hypothetical protein CHLREDRAFT_105896 [Chlamydomonas reinhardtii]
gi|158273945|gb|EDO99730.1| predicted protein [Chlamydomonas reinhardtii]
Length = 117
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 59/106 (55%), Gaps = 6/106 (5%)
Query: 40 NEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTV 99
N+ L GG IH AGPDL K C PE +P +RCP GEA +T G+ ++IHT
Sbjct: 2 NQRLCGGGGVDGMIHAKAGPDLAKECLGKPEVRPGIRCPTGEAVVTKGYNFNTEYIIHTC 61
Query: 100 GPVF----NFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
GPV+ C + L +AY+N L+ + ++ +AF AIS GV
Sbjct: 62 GPVYAKEREMECKRD--LTNAYRNSLTKAQELGVRCVAFAAISTGV 105
>gi|325978075|ref|YP_004287791.1| Appr-1-p processing protein [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|386337550|ref|YP_006033719.1| macro domain-containing protein [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
gi|325178003|emb|CBZ48047.1| appr-1-p processing enzyme family domain protein [Streptococcus
gallolyticus subsp. gallolyticus ATCC BAA-2069]
gi|334280186|dbj|BAK27760.1| macro domain-containing protein [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
Length = 260
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 83/159 (52%), Gaps = 16/159 (10%)
Query: 12 TKTSLKISKGDISRWCVDRSSDAIVSPTNEILL-----LGGFTAAAIHEAAGPDLQKACY 66
T L + KGDI+R VD AIV+ N +L L AIH AG L+ CY
Sbjct: 81 TDDRLYVWKGDITRLKVD----AIVNAANRRMLGCFQPLHDCADNAIHTYAGVQLRLDCY 136
Query: 67 QIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNP--EDILRSAYKNCLSVG 124
++ + Q P G A+ITP + LP V+HTV P N H P ED+L +Y +CL++
Sbjct: 137 KLMQEQGHDE-PTGTAKITPAYNLPAKFVLHTVSPAINEHLTPIDEDLLAKSYLSCLTLA 195
Query: 125 KANNIQYIAFPAISCG--VSQIMTHA--IKLQTNCGFLE 159
+ N+++ +A +++ V I +A I +QT FLE
Sbjct: 196 EKNHLESVALSSLATDDEVHFINENAARIAIQTAKDFLE 234
>gi|330818397|ref|YP_004362102.1| Appr-1-p processing protein [Burkholderia gladioli BSR3]
gi|327370790|gb|AEA62146.1| Appr-1-p processing enzyme family domain protein [Burkholderia
gladioli BSR3]
Length = 173
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 63/112 (56%), Gaps = 7/112 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ NE LL GG AIH AAGP+L C + C G+A++T + LP
Sbjct: 22 DAIVNAANESLLGGGGVDGAIHRAAGPELLAECRSLGG------CATGDAKLTGAYHLPA 75
Query: 93 SHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCGVSQ 143
HVIHTVGPV+ + E + L S Y+ L V A +AFPAISCGV +
Sbjct: 76 RHVIHTVGPVWQGGMSGEAEHLASCYRRSLEVAAAAGCASLAFPAISCGVYR 127
>gi|406868548|gb|EKD21585.1| macro domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 288
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 74/146 (50%), Gaps = 16/146 (10%)
Query: 2 TFKVQTLSFSTKTSLK----ISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAA 57
TF +T + SL + +GDI++ V AIV+ N LL GG AIH AA
Sbjct: 25 TFDTETEAPKPSQSLNDRIGLIQGDITKLEVG----AIVNAANNSLLGGGGVDGAIHRAA 80
Query: 58 GPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFN--FHCNPEDILRS 115
GP+L K C Q+ C G A+IT + LP VIH VGPV++ F E+ L
Sbjct: 81 GPELVKECRQLK------GCDTGSAKITNAYNLPCKKVIHAVGPVYDSSFKDESEEDLAG 134
Query: 116 AYKNCLSVGKANNIQYIAFPAISCGV 141
Y L + AN+ + IAF A+S GV
Sbjct: 135 CYTTSLQLAVANDCKSIAFSALSTGV 160
>gi|345480802|ref|XP_001607170.2| PREDICTED: MACRO domain-containing protein 2-like [Nasonia
vitripennis]
Length = 271
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 72/138 (52%), Gaps = 14/138 (10%)
Query: 4 KVQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQK 63
K Q + + I +GDI++ +D AIV+ N LL GG AIH AG L++
Sbjct: 92 KPQETNTELANKVSIWEGDITKLEID----AIVNAANSSLLGGGGVDGAIHRGAGGHLKE 147
Query: 64 ACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSV 123
C + C GEA+IT + LP +VIHTVGP PE L+ Y+N L+V
Sbjct: 148 ECATLN------GCRVGEAKITGAYMLPAKYVIHTVGPQGE---KPEK-LQECYQNSLTV 197
Query: 124 GKANNIQYIAFPAISCGV 141
K N ++ IAFP IS G+
Sbjct: 198 AKENGVRTIAFPCISTGI 215
>gi|50839494|gb|AAT82161.1| conserved protein [Propionibacterium acnes KPA171202]
Length = 223
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 58/109 (53%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DA+V+ N L GG AIH AAGP+L +AC ++ E P G++ T K+P
Sbjct: 69 DAVVNAANRQLAGGGGVDGAIHRAAGPELSQACRKLRETTLTDGLPTGQSVATTAGKMPA 128
Query: 93 SHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
VIHTVGPV+ + D L S Y+ L V + IAFP IS GV
Sbjct: 129 KWVIHTVGPVWAKTIDKSDQLASCYRTSLHVADEIGARTIAFPTISAGV 177
>gi|187607832|ref|NP_001120322.1| MACRO domain containing 2 [Xenopus (Silurana) tropicalis]
gi|156914843|gb|AAI52659.1| Zgc:65960 protein [Danio rerio]
gi|170284409|gb|AAI60949.1| LOC100145385 protein [Xenopus (Silurana) tropicalis]
Length = 452
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 75/138 (54%), Gaps = 14/138 (10%)
Query: 6 QTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKAC 65
Q+ S + K SL KGDI+ +D AIV+ N LL GG IH AAG L + C
Sbjct: 55 QSSSLADKVSL--YKGDITILEID----AIVNAANSSLLGGGGVDGCIHRAAGHLLYEEC 108
Query: 66 YQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVF--NFHCNPEDILRSAYKNCLSV 123
+ + C G+A+IT G+ LP +VIHTVGP+ N + D L S Y + L +
Sbjct: 109 HSL------NGCDTGKAKITCGYDLPAKYVIHTVGPIARGNVGQSQRDDLESCYYSSLKL 162
Query: 124 GKANNIQYIAFPAISCGV 141
K NN++ +AFP IS G+
Sbjct: 163 MKDNNLRSVAFPCISTGI 180
>gi|119898928|ref|YP_934141.1| hypothetical protein azo2637 [Azoarcus sp. BH72]
gi|119671341|emb|CAL95254.1| conserved hypothetical protein [Azoarcus sp. BH72]
Length = 172
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 64/109 (58%), Gaps = 7/109 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAGP+L++AC + C G A++TP ++L
Sbjct: 18 DAIVNAANSSLLGGGGVDGAIHRAAGPELREACRWLGG------CRTGAAKLTPAYQLAA 71
Query: 93 SHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCG 140
VIHTVGPV++ E ++L S Y++ L + + + IAFPAIS G
Sbjct: 72 KFVIHTVGPVWHGGAQGEPELLASCYRSALELAAEHGVASIAFPAISTG 120
>gi|225569433|ref|ZP_03778458.1| hypothetical protein CLOHYLEM_05518 [Clostridium hylemonae DSM
15053]
gi|225161641|gb|EEG74260.1| hypothetical protein CLOHYLEM_05518 [Clostridium hylemonae DSM
15053]
Length = 267
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 69/128 (53%), Gaps = 12/128 (9%)
Query: 20 KGDISRWCVDRSSDAIVSPTNEILL-----LGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+GDI+R +DAIV+ N ++ G AIH AAG L+ C QI E Q
Sbjct: 98 QGDITRL----KADAIVNAANSQMMGCFVPCHGCIDNAIHSAAGLQLRNECAQIMEEQGH 153
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE--DILRSAYKNCLSVGKANNIQYI 132
P G+A+IT G+ LP HVIHTVGP+ E + L+S YK+CL + + ++ I
Sbjct: 154 EE-PTGKAKITGGYNLPAEHVIHTVGPIVGVQVTEEQKEQLKSCYKSCLKLAEKQGLRSI 212
Query: 133 AFPAISCG 140
AF IS G
Sbjct: 213 AFCCISTG 220
>gi|374337775|ref|YP_005094483.1| hypothetical protein SMA_0809 [Streptococcus macedonicus ACA-DC
198]
gi|372283883|emb|CCF02100.1| COG2110, Macro domain, possibly ADP-ribose binding module
[Streptococcus macedonicus ACA-DC 198]
Length = 260
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 83/159 (52%), Gaps = 16/159 (10%)
Query: 12 TKTSLKISKGDISRWCVDRSSDAIVSPTNEILL-----LGGFTAAAIHEAAGPDLQKACY 66
T L + KGDI+R VD AIV+ N +L L AIH AG L+ CY
Sbjct: 81 TDDRLYVWKGDITRLKVD----AIVNTANRRMLGCFQPLHDCADNAIHTYAGVQLRLDCY 136
Query: 67 QIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNP--EDILRSAYKNCLSVG 124
++ + Q P G A+ITP + LP V+HTV P N H P ED+L +Y +CL++
Sbjct: 137 KLMQEQGHDE-PTGTAKITPAYNLPAKFVLHTVSPAINEHLTPTDEDLLAKSYLSCLTLA 195
Query: 125 KANNIQYIAFPAISCG--VSQIMTHA--IKLQTNCGFLE 159
+ N+++ +A +++ V I +A I +QT FLE
Sbjct: 196 EKNHLESVALSSLATDDEVHFINENAARIAIQTAKDFLE 234
>gi|192290194|ref|YP_001990799.1| Appr-1-p processing protein [Rhodopseudomonas palustris TIE-1]
gi|192283943|gb|ACF00324.1| Appr-1-p processing domain protein [Rhodopseudomonas palustris
TIE-1]
Length = 180
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 61/110 (55%), Gaps = 7/110 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAGP+L C + C G+A+IT G++LP
Sbjct: 26 DAIVNAANSSLLGGGGVDGAIHRAAGPELLAECETLGG------CETGDAKITRGYRLPA 79
Query: 93 SHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
HVIH VGP+++ + ED L S Y L + + + IAF AIS GV
Sbjct: 80 RHVIHAVGPIWHGGGHGEDAALASCYARALQLANEHELSSIAFSAISTGV 129
>gi|452911317|ref|ZP_21959987.1| Putative ADP-ribose binding module [Kocuria palustris PEL]
gi|452833560|gb|EME36371.1| Putative ADP-ribose binding module [Kocuria palustris PEL]
Length = 176
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L+I GDI+ VD A+V+ N L+ GG AIH A GP + + C Q+ Q
Sbjct: 3 LRIQPGDITTMTVD----AVVNAANSSLMGGGGVDGAIHRAGGPSILQECKQLRAEQLPD 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFP 135
P G+A T ++P VIHTVGP + + + L S Y+ L V + +AFP
Sbjct: 59 GLPAGQAVATTAGEMPARWVIHTVGPTYAKTIDKSETLASCYRESLRVAAEIGARTVAFP 118
Query: 136 AISCGV 141
AIS GV
Sbjct: 119 AISAGV 124
>gi|288905097|ref|YP_003430319.1| hypothetical protein GALLO_0896 [Streptococcus gallolyticus UCN34]
gi|288731823|emb|CBI13388.1| conserved hypothetical protein [Streptococcus gallolyticus UCN34]
Length = 260
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 82/159 (51%), Gaps = 16/159 (10%)
Query: 12 TKTSLKISKGDISRWCVDRSSDAIVSPTNEILL-----LGGFTAAAIHEAAGPDLQKACY 66
T L + KGDI+R VD AIV+ N +L L AIH AG L+ CY
Sbjct: 81 TDDRLYVWKGDITRLKVD----AIVNAANRRMLGCFQPLHDCADNAIHTYAGVQLRLDCY 136
Query: 67 QIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNP--EDILRSAYKNCLSVG 124
++ + Q P G A+ITP + LP V+HTV P N H P ED+L +Y +CL++
Sbjct: 137 KLMQEQGHDE-PTGTAKITPAYNLPAKFVLHTVSPAINEHLTPIDEDLLAKSYLSCLTLA 195
Query: 125 KANNIQYIAFPAISCG--VSQIMTHA--IKLQTNCGFLE 159
+ N ++ +A +++ V I +A I +QT FLE
Sbjct: 196 EKNRLESVALSSLATDDEVHFINENAARIAIQTAKDFLE 234
>gi|343427784|emb|CBQ71310.1| related to LRP16 protein [Sporisorium reilianum SRZ2]
Length = 221
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 68/130 (52%), Gaps = 12/130 (9%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
+ L I GDI+ VD AIV+ N LL GG AI AAGP L + C +
Sbjct: 37 SRLSIHCGDITTLAVD----AIVNAANNSLLGGGGVDGAIQRAAGPQLLEECRTLN---- 88
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNF--HCNPEDILRSAYKNCLSVGKANNIQY 131
C G A+ T + LP +H+IHTVGPV+ H E +LRSAY + L K +
Sbjct: 89 --GCDTGAAKTTAAYNLPANHIIHTVGPVYKAAKHDECERLLRSAYASSLDELKKVGGKS 146
Query: 132 IAFPAISCGV 141
+AFP+IS GV
Sbjct: 147 VAFPSISTGV 156
>gi|330998120|ref|ZP_08321948.1| macro domain protein [Paraprevotella xylaniphila YIT 11841]
gi|329569209|gb|EGG51000.1| macro domain protein [Paraprevotella xylaniphila YIT 11841]
Length = 172
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 75/130 (57%), Gaps = 11/130 (8%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K +KI GDI++ VD AIV+ N LL GG AIH AAG +L + C +
Sbjct: 2 KDRIKIIVGDITQLQVD----AIVNAANCSLLGGGGVDGAIHRAAGKELLEECRTLG--- 54
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
C GE+++T ++LP +IHTVGPV++ + E ++L S Y L + +A++++
Sbjct: 55 ---GCRTGESKMTGAYRLPCKKIIHTVGPVWHGGGHHEAELLASCYATALQMAEAHHLKS 111
Query: 132 IAFPAISCGV 141
IAFP IS GV
Sbjct: 112 IAFPCISTGV 121
>gi|289706740|ref|ZP_06503084.1| macro domain protein [Micrococcus luteus SK58]
gi|289556540|gb|EFD49887.1| macro domain protein [Micrococcus luteus SK58]
Length = 175
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L I+ GDI+ +DA+V+ N LL GG AIH GP++ C ++ E
Sbjct: 3 LTIAPGDITA----THADAVVNAANSTLLGGGGVDGAIHRRGGPEILAECRRLRETDLPE 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFP 135
P G+A T +LP VIHTVGPV+ + D L S Y+ L V + +AFP
Sbjct: 59 GLPAGQAVATTAGRLPARWVIHTVGPVWAKTIDKSDTLASCYRESLKVAAGLGARTVAFP 118
Query: 136 AISCGV 141
AIS G+
Sbjct: 119 AISAGI 124
>gi|291436238|ref|ZP_06575628.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
gi|116247604|gb|ABJ90174.1| hypothetical protein [Streptomyces ghanaensis ATCC 14672]
gi|291339133|gb|EFE66089.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
Length = 170
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 67/127 (52%), Gaps = 4/127 (3%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+L + +GDI+R +S+DAIV+ N LL GG AIH GP + + C ++ ++
Sbjct: 4 TLTLVRGDITR----QSADAIVNAANSSLLGGGGVDGAIHRRGGPAILEECRRLRASRYG 59
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
P G A T L VIHTVGPVF+ + +L S Y+ L V + +AF
Sbjct: 60 EGLPTGRAVATTAGDLDARWVIHTVGPVFSREEDRSALLASCYRESLRVADGLGARTVAF 119
Query: 135 PAISCGV 141
PA+S GV
Sbjct: 120 PAVSTGV 126
>gi|90423111|ref|YP_531481.1| Appr-1-p processing [Rhodopseudomonas palustris BisB18]
gi|90105125|gb|ABD87162.1| Appr-1-p processing [Rhodopseudomonas palustris BisB18]
Length = 180
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 62/110 (56%), Gaps = 7/110 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N L GG AIH AAGP L C + C G+A+IT G++LP
Sbjct: 23 DAIVNAANASLQGGGGVDGAIHRAAGPQLLAECRALNG------CDTGDAKITQGYRLPA 76
Query: 93 SHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
HVIH VGPV+ ED L S Y+ +++ +++ + IAFPAIS G+
Sbjct: 77 RHVIHAVGPVWRGGAQGEDQALASCYRRAVALCQSHGLTSIAFPAISTGI 126
>gi|317057298|ref|YP_004105765.1| Appr-1-p processing protein [Ruminococcus albus 7]
gi|315449567|gb|ADU23131.1| Appr-1-p processing domain protein [Ruminococcus albus 7]
Length = 348
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 70/123 (56%), Gaps = 11/123 (8%)
Query: 20 KGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPP 79
+ DI++ S+DAIV+ N LL GG AIH AAG +L + C + C
Sbjct: 7 RADITKL----SADAIVNAANSSLLGGGGVDGAIHRAAGAELLEECRLLGG------CET 56
Query: 80 GEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAIS 138
G+A+ T G++L ++IHTVGPV++ N E + LRS Y+N L++ + IAFP IS
Sbjct: 57 GQAKATKGYRLDCRYIIHTVGPVWHGGENGESEQLRSCYRNSLALAEKLGCTSIAFPLIS 116
Query: 139 CGV 141
GV
Sbjct: 117 AGV 119
>gi|254428870|ref|ZP_05042577.1| Appr-1-p processing enzyme family protein [Alcanivorax sp. DG881]
gi|196195039|gb|EDX89998.1| Appr-1-p processing enzyme family protein [Alcanivorax sp. DG881]
Length = 176
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 72/132 (54%), Gaps = 10/132 (7%)
Query: 10 FSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIP 69
F T T ++ +GDI+ AIV+ N L +GG A AIH AAGP L+K C IP
Sbjct: 6 FDTVT-VETVQGDIANQ---PDLGAIVNAANAELRIGGGVAGAIHRAAGPGLEKEC--IP 59
Query: 70 EAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNI 129
R PG+A I+ G LP +HVIH +GPV+ + +L S Y+ L + + + I
Sbjct: 60 LGPIR----PGKAVISGGHNLPNAHVIHCLGPVYGRDEPSDQLLASCYRKALELAEQHGI 115
Query: 130 QYIAFPAISCGV 141
I FPAIS GV
Sbjct: 116 ARIGFPAISTGV 127
>gi|302557344|ref|ZP_07309686.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
gi|302474962|gb|EFL38055.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
Length = 176
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 68/132 (51%), Gaps = 4/132 (3%)
Query: 10 FSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIP 69
++ +L + +GDI+R +S+DAIV+ N LL GG AIH GP++ C +
Sbjct: 1 MTSTPALTLVRGDITR----QSADAIVNAANSSLLGGGGVDGAIHRRGGPEILAECRALR 56
Query: 70 EAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNI 129
A+ P G A T +L VIHTVGPV+ ++L S Y+ L V
Sbjct: 57 AARYGKGLPTGRAVATTAGRLDARWVIHTVGPVYQASGGDPELLASCYRESLRVADELGA 116
Query: 130 QYIAFPAISCGV 141
+ +AFPAIS GV
Sbjct: 117 RTVAFPAISTGV 128
>gi|312863669|ref|ZP_07723907.1| macro domain protein [Streptococcus vestibularis F0396]
gi|311101205|gb|EFQ59410.1| macro domain protein [Streptococcus vestibularis F0396]
Length = 260
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 71/128 (55%), Gaps = 12/128 (9%)
Query: 20 KGDISRWCVDRSSDAIVSPTNEILL-----LGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
KGDI+R VD AIV+ N+ LL L AIH AG L++AC+++ Q
Sbjct: 89 KGDITRLEVD----AIVNAANKTLLGCMKPLHNCVDNAIHTYAGVQLRQACFELILEQG- 143
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNP--EDILRSAYKNCLSVGKANNIQYI 132
P G A+ITP + LP + VIHTVGP P ED+L +Y + L++ + NNI+ I
Sbjct: 144 YEEPVGMAKITPAYNLPSAFVIHTVGPKIENQLTPIYEDLLVKSYLSVLALAEKNNIESI 203
Query: 133 AFPAISCG 140
+ P IS G
Sbjct: 204 SIPCISTG 211
>gi|443622850|ref|ZP_21107369.1| hypothetical protein STVIR_1274 [Streptomyces viridochromogenes
Tue57]
gi|443343727|gb|ELS57850.1| hypothetical protein STVIR_1274 [Streptomyces viridochromogenes
Tue57]
Length = 169
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T++++ +GDI+R VD AIV+ N LL GG AIH GP + C ++ ++
Sbjct: 2 TTIRLVRGDITRESVD----AIVNAANSSLLGGGGVDGAIHRRGGPAILDECRELRASRY 57
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
P G+A T +L VIHTVGPV+ + +L S Y+ L V + +A
Sbjct: 58 GKGLPTGQAVATTAGELDARWVIHTVGPVYQVSGSDPSLLASCYRESLRVADELGARTVA 117
Query: 134 FPAISCGV 141
FPAIS GV
Sbjct: 118 FPAISTGV 125
>gi|322515985|ref|ZP_08068923.1| appr-1-p processing enzyme family domain protein [Streptococcus
vestibularis ATCC 49124]
gi|322125520|gb|EFX96861.1| appr-1-p processing enzyme family domain protein [Streptococcus
vestibularis ATCC 49124]
Length = 260
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 71/128 (55%), Gaps = 12/128 (9%)
Query: 20 KGDISRWCVDRSSDAIVSPTNEILL-----LGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
KGDI+R VD AIV+ N+ LL L AIH AG L++AC+++ Q
Sbjct: 89 KGDITRLEVD----AIVNAANKTLLGCMKPLHNCVDNAIHTYAGVQLRQACFELILEQG- 143
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNP--EDILRSAYKNCLSVGKANNIQYI 132
P G A+ITP + LP + VIHTVGP P ED+L +Y + L++ + NNI+ I
Sbjct: 144 YEEPVGMAKITPAYNLPSAFVIHTVGPKIENQLTPIDEDLLVKSYLSVLALAEKNNIESI 203
Query: 133 AFPAISCG 140
+ P IS G
Sbjct: 204 SIPCISTG 211
>gi|239918110|ref|YP_002957668.1| hypothetical protein Mlut_16260 [Micrococcus luteus NCTC 2665]
gi|281415705|ref|ZP_06247447.1| hypothetical protein MlutN2_10929 [Micrococcus luteus NCTC 2665]
gi|239839317|gb|ACS31114.1| predicted phosphatase, C-terminal domain of histone macro H2A1 like
protein [Micrococcus luteus NCTC 2665]
Length = 175
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L I+ GDI+ +DA+V+ N LL GG AIH GP++ C ++ E
Sbjct: 3 LTIAPGDITA----THADAVVNAANSTLLGGGGVDGAIHRRGGPEILAECRRLRETDLPE 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFP 135
P G+A T +LP VIHTVGPV+ + D L S Y+ L V + +AFP
Sbjct: 59 GLPAGQAVATTAGRLPARWVIHTVGPVWAKTIDKSDTLASCYRESLKVAAGLGARTVAFP 118
Query: 136 AISCGV 141
AIS G+
Sbjct: 119 AISAGI 124
>gi|91781670|ref|YP_556876.1| appr-1-p processing enzyme [Burkholderia xenovorans LB400]
gi|91685624|gb|ABE28824.1| Putative appr-1-p processing enzyme [Burkholderia xenovorans LB400]
Length = 182
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 62/110 (56%), Gaps = 7/110 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAG +L + C + C G+A++T G++LP
Sbjct: 22 DAIVNAANTSLLGGGGVDGAIHRAAGKELIRECETLGG------CATGDAKLTRGYRLPA 75
Query: 93 SHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
+VIH VGP + + E D+L S Y+ L V + IAFPAISCG+
Sbjct: 76 RYVIHAVGPRWRGGGHGEADLLASCYQRSLEVAREAQCTSIAFPAISCGI 125
>gi|348581336|ref|XP_003476433.1| PREDICTED: MACRO domain-containing protein 2-like [Cavia porcellus]
Length = 728
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 73/135 (54%), Gaps = 14/135 (10%)
Query: 9 SFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQI 68
S S K SL +GDI+ VD AIV+ N LL GG IH AAGP L C +
Sbjct: 67 SLSEKVSL--YRGDITLLEVD----AIVNAANASLLGGGGGDGCIHRAAGPCLLGECRNL 120
Query: 69 PEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNP--EDILRSAYKNCLSVGKA 126
C G A+IT G+ LP HVIHTVGP+ H N ++ L + YK+ L + K
Sbjct: 121 ------NGCETGHAKITCGYDLPAKHVIHTVGPIARGHINGSHKEDLANCYKSSLKLVKE 174
Query: 127 NNIQYIAFPAISCGV 141
NN++ +AFP IS G+
Sbjct: 175 NNLRSVAFPCISTGI 189
>gi|218885588|ref|YP_002434909.1| Appr-1-p processing protein [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|218756542|gb|ACL07441.1| Appr-1-p processing domain protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 202
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 68/127 (53%), Gaps = 9/127 (7%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L +S GD++ ++DA+V+ N L GG A+H AAGP L A I R
Sbjct: 17 LAVSTGDLA----ATATDAVVNAANAELRGGGGVDGALHRAAGPMLLPAGRDI--VARRG 70
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF--NFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
GEA ITPGF LP HVIH VGP++ H P+ L + + N L + + + +A
Sbjct: 71 PLAAGEAVITPGFNLPARHVIHAVGPIWRGGTHGEPQ-ALAAVHANSLRLAAEHGLARVA 129
Query: 134 FPAISCG 140
FPAISCG
Sbjct: 130 FPAISCG 136
>gi|257458328|ref|ZP_05623476.1| appr-1-p processing enzyme domain protein [Treponema vincentii ATCC
35580]
gi|257444263|gb|EEV19358.1| appr-1-p processing enzyme domain protein [Treponema vincentii ATCC
35580]
Length = 177
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 68/125 (54%), Gaps = 12/125 (9%)
Query: 22 DISRWCVDRSS---DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCP 78
DI C D + DAIV+ N LL GG AIH AAGP+L + C + C
Sbjct: 2 DIKIICADITVLKVDAIVNAANTSLLGGGGVDGAIHRAAGPELLEECRALN------GCK 55
Query: 79 PGEARITPGFKLPVSHVIHTVGPVF--NFHCNPEDILRSAYKNCLSVGKANNIQYIAFPA 136
G+A+IT G+ LP +VIHT GP++ H PE +L S Y+N L + + + IAFP
Sbjct: 56 TGQAKITRGYNLPAEYVIHTPGPIYQDGKHGEPE-LLASCYRNSLILASDFHCKTIAFPC 114
Query: 137 ISCGV 141
IS GV
Sbjct: 115 ISAGV 119
>gi|409077760|gb|EKM78125.1| hypothetical protein AGABI1DRAFT_114944 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 220
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 69/128 (53%), Gaps = 15/128 (11%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ + +GDI+ VD AIV+ NE LL AIH AAGP+L K C +
Sbjct: 44 VSVCRGDITVIDVD----AIVNAANESLL---GVDGAIHRAAGPELLKECRLLNG----- 91
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFN--FHCNPEDILRSAYKNCLSVGKANNIQYIA 133
C G+A+IT G+KLP H+IHTVGPV++ + L S YK L V ++ IA
Sbjct: 92 -CDIGDAKITKGYKLPARHIIHTVGPVYHSEYEGTIAGQLASCYKRSLEVAVEKGLKSIA 150
Query: 134 FPAISCGV 141
FP IS G+
Sbjct: 151 FPCISTGI 158
>gi|391330464|ref|XP_003739680.1| PREDICTED: O-acetyl-ADP-ribose deacetylase MACROD2-like
[Metaseiulus occidentalis]
Length = 229
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 66/124 (53%), Gaps = 14/124 (11%)
Query: 18 ISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRC 77
I +GDI+ +D IV+ N LL GG AIH+AAGP L + C + C
Sbjct: 64 IFEGDITTLEID----GIVNAANNRLLGGGGVDGAIHKAAGPQLLEECAALNG------C 113
Query: 78 PPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAI 137
G+A+ T G+KLP ++IHTVGP+ E L Y CL KA +++IAFP I
Sbjct: 114 ATGDAKATGGYKLPAKYIIHTVGPIG----ENESKLHGCYLTCLETAKALRMRHIAFPCI 169
Query: 138 SCGV 141
S GV
Sbjct: 170 STGV 173
>gi|258572997|ref|XP_002540680.1| protein LRP16 [Uncinocarpus reesii 1704]
gi|237900946|gb|EEP75347.1| protein LRP16 [Uncinocarpus reesii 1704]
Length = 339
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 61/114 (53%), Gaps = 11/114 (9%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
D IV+ N LL GG AIH AAGP L C + C G+A+IT + LP
Sbjct: 54 DCIVNAANRSLLGGGGVDGAIHRAAGPSLLWECRNL------GGCQTGDAKITKAYNLPC 107
Query: 93 SHVIHTVGPVF-----NFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
+IHTVGPV+ N PE +LRS Y+ L++ N ++ IAF +IS GV
Sbjct: 108 KKIIHTVGPVYWTEMQNNEDEPERLLRSCYRRSLALAAENGMKTIAFSSISTGV 161
>gi|225558709|gb|EEH06993.1| LRP16 family protein [Ajellomyces capsulatus G186AR]
Length = 330
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 74/137 (54%), Gaps = 16/137 (11%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
D IV+ N+ LL GG AIH AAG L + C + C G+A+IT + LP
Sbjct: 55 DCIVNAANKSLLGGGGVDGAIHRAAGRGLLQECRAL------GGCATGDAKITNAYNLPC 108
Query: 93 SHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGV--------SQI 144
+VIH VGP+F N E +LRS Y L++ + ++ IAFPAIS GV +++
Sbjct: 109 RNVIHAVGPMFWADENRESLLRSCYSRSLALAAESGLKSIAFPAISTGVYGYPSLKAAEV 168
Query: 145 MTHAIK--LQTNCGFLE 159
A++ L+T+ G LE
Sbjct: 169 AISAVRHFLETSPGPLE 185
>gi|357054772|ref|ZP_09115853.1| hypothetical protein HMPREF9467_02825 [Clostridium clostridioforme
2_1_49FAA]
gi|355384076|gb|EHG31147.1| hypothetical protein HMPREF9467_02825 [Clostridium clostridioforme
2_1_49FAA]
Length = 173
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 67/127 (52%), Gaps = 10/127 (7%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+K KGDI++ AIV+ N LL GG AIH AAG +L C +
Sbjct: 2 IKTIKGDITKIT---DVQAIVNAANSSLLGGGGVDGAIHRAAGKELLFECRLLG------ 52
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHC-NPEDILRSAYKNCLSVGKANNIQYIAF 134
C G+A+IT G+ L +VIHTVGPV+N N + L Y N + V N I+ IAF
Sbjct: 53 GCKTGQAKITKGYNLHCDYVIHTVGPVWNGGGKNEAEFLGQCYYNSMKVALENGIRRIAF 112
Query: 135 PAISCGV 141
P+IS G+
Sbjct: 113 PSISTGI 119
>gi|319950331|ref|ZP_08024250.1| Appr-1-p processing domain protein [Dietzia cinnamea P4]
gi|319436023|gb|EFV91224.1| Appr-1-p processing domain protein [Dietzia cinnamea P4]
Length = 179
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
Query: 8 LSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQ 67
++ + + +++S GDI+R VD A+V+ N LL GG AIH A GP + C +
Sbjct: 1 MTTTRRARIELSHGDITRMDVD----AVVNAANSSLLGGGGVDGAIHRAGGPTILAECRE 56
Query: 68 IPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKAN 127
+ + P G+A T LP VIHTVGPV + +L Y+N L+V
Sbjct: 57 LRSGRLADGLPTGQAVATGAGDLPARWVIHTVGPVHGHDPDGARLLADCYRNSLAVADEL 116
Query: 128 NIQYIAFPAISCG 140
+ +AFP IS G
Sbjct: 117 GARTVAFPLISAG 129
>gi|114777242|ref|ZP_01452253.1| hypothetical protein SPV1_09253 [Mariprofundus ferrooxydans PV-1]
gi|114552387|gb|EAU54870.1| hypothetical protein SPV1_09253 [Mariprofundus ferrooxydans PV-1]
Length = 168
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 72/128 (56%), Gaps = 11/128 (8%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T ++ + DI+ VD AIV+ N LL GG AIH AAGP L C ++
Sbjct: 2 TDMRSVQADITMLNVD----AIVNAANTSLLGGGGVDGAIHRAAGPALLDECRRLGG--- 54
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
C GEA++T ++LP +VIHTVGP+++ E ++L + Y+N L++ ++ +
Sbjct: 55 ---CNAGEAKMTAAYRLPARYVIHTVGPIWHGGGEGEAEVLAACYRNSLALALGRSLASV 111
Query: 133 AFPAISCG 140
AFP+IS G
Sbjct: 112 AFPSISTG 119
>gi|350561653|ref|ZP_08930491.1| Appr-1-p processing domain protein [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349780685|gb|EGZ35003.1| Appr-1-p processing domain protein [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 179
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 65/126 (51%), Gaps = 9/126 (7%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
S++ GDI+R DAIV+ N L GG A AIH AAGP L + C +P
Sbjct: 10 SIECIVGDITRQL---DMDAIVNAANAQLRPGGGVAGAIHRAAGPGLDQEC------RPL 60
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
PG+A IT G LP HV+H +GPVF E++L + Y+N L IAF
Sbjct: 61 APIAPGQAVITGGHDLPNRHVVHCLGPVFGRDEPGEELLAACYRNALQQADDAGAGSIAF 120
Query: 135 PAISCG 140
PAI+ G
Sbjct: 121 PAIATG 126
>gi|291279929|ref|YP_003496764.1| appr-1-p processing domain protein [Deferribacter desulfuricans
SSM1]
gi|290754631|dbj|BAI81008.1| appr-1-p processing domain protein [Deferribacter desulfuricans
SSM1]
Length = 178
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 71/144 (49%), Gaps = 18/144 (12%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
TS+KI +GDI++ VD AIV+ N L +GG A AI A G ++QK C +I
Sbjct: 8 TSVKIKQGDITKEKVD----AIVNAANSHLKMGGGVAGAIRRAGGEEIQKECDKIG---- 59
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
CP G+A KL +VIH VGP + PE L +A N L N IA
Sbjct: 60 --YCPLGDAVAINAGKLDAKYVIHAVGPRYGIDPEPEKNLYNAVYNSLKRAVEKNCNSIA 117
Query: 134 FPAISCGV--------SQIMTHAI 149
PAIS G+ S+I+ AI
Sbjct: 118 LPAISTGIFGYPLDEASEIILRAI 141
>gi|154286574|ref|XP_001544082.1| hypothetical protein HCAG_01128 [Ajellomyces capsulatus NAm1]
gi|150407723|gb|EDN03264.1| hypothetical protein HCAG_01128 [Ajellomyces capsulatus NAm1]
Length = 330
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 74/137 (54%), Gaps = 16/137 (11%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
D IV+ N+ LL GG AIH AAG L + C + C G+A+IT + LP
Sbjct: 55 DCIVNAANKSLLGGGGVDGAIHRAAGRGLLQECRAL------GGCATGDAKITNAYNLPC 108
Query: 93 SHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGV--------SQI 144
+VIH VGP+F N E +LRS Y L++ + ++ IAFPAIS GV +++
Sbjct: 109 RNVIHAVGPMFWADENRESLLRSCYSRSLALAAESGLKSIAFPAISTGVYGYPSLKAAEV 168
Query: 145 MTHAIK--LQTNCGFLE 159
A++ L+T+ G LE
Sbjct: 169 AISAVRHFLETSPGPLE 185
>gi|124485793|ref|YP_001030409.1| tryptophan--tRNA ligase [Methanocorpusculum labreanum Z]
gi|124363334|gb|ABN07142.1| Appr-1-p processing domain protein [Methanocorpusculum labreanum Z]
Length = 183
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 69/128 (53%), Gaps = 13/128 (10%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L + K DI+ VD IV+ N LL GG AIH AAGP L C +
Sbjct: 12 LGVVKTDITTLSVD----VIVNAANTTLLGGGGVDGAIHHAAGPGLLAECRTLGG----- 62
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF--NFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
C GEA+IT G+ LP ++IHTVGPV+ PE LR+ Y + L++ + ++ IA
Sbjct: 63 -CRIGEAKITKGYALPAKYIIHTVGPVWWGGNEGEPEQ-LRACYFHSLTLAGEHGLRTIA 120
Query: 134 FPAISCGV 141
FPA+S GV
Sbjct: 121 FPAVSTGV 128
>gi|320534521|ref|ZP_08034978.1| RNase III regulator YmdB [Actinomyces sp. oral taxon 171 str.
F0337]
gi|320133254|gb|EFW25745.1| RNase III regulator YmdB [Actinomyces sp. oral taxon 171 str.
F0337]
Length = 182
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAGP L AC ++ + + P G A TPGF LP
Sbjct: 16 DAIVNAANSTLLGGGGVDGAIHRAAGPSLLDACQKVRDTELPDGLPVGRAVATPGFDLPA 75
Query: 93 SHVIHTVGPVFNFHCNPED--ILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
+ VIHTVGP N H +D +LR+ + + L + IA PA+S GV
Sbjct: 76 AWVIHTVGP--NRHAGEDDPALLRACFDSSLELAIQLGCTGIALPAVSAGV 124
>gi|340522649|gb|EGR52882.1| predicted protein [Trichoderma reesei QM6a]
Length = 211
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 65/127 (51%), Gaps = 10/127 (7%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACY-QIPEAQPR 74
+ + + DI+ VD AIV+ L GG AIH AAGP L + C + P+
Sbjct: 44 VSLVRTDITSLAVD----AIVNAAKNSLRGGGGVDGAIHRAAGPGLVRECLARYPDG--- 96
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C G+A IT G LP +VIHTVGP++ E +LRS Y+ CL N+ IAF
Sbjct: 97 --CDTGDAVITAGHNLPARNVIHTVGPIYQSQAASEPLLRSCYQACLRTAVENDCATIAF 154
Query: 135 PAISCGV 141
IS GV
Sbjct: 155 SGISTGV 161
>gi|374987005|ref|YP_004962500.1| hypothetical protein SBI_04248 [Streptomyces bingchenggensis BCW-1]
gi|297157657|gb|ADI07369.1| hypothetical protein SBI_04248 [Streptomyces bingchenggensis BCW-1]
Length = 170
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T++ +GDI+ D+ DAIV+ N LL GG AIH GP++ +AC + +
Sbjct: 3 TTITFVRGDIT----DQHVDAIVNAANSSLLGGGGVDGAIHRRGGPEILEACRALRASHY 58
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
P G A T +L VIHTVGPV++ + D+L S Y+ L V + +A
Sbjct: 59 GKGLPTGRAVATTAGRLHSEWVIHTVGPVWSATEDRSDLLASCYRESLRVADELGARTVA 118
Query: 134 FPAISCGV 141
FPAIS GV
Sbjct: 119 FPAISTGV 126
>gi|154507543|ref|ZP_02043185.1| hypothetical protein ACTODO_00022 [Actinomyces odontolyticus ATCC
17982]
gi|153799332|gb|EDN81752.1| macro domain protein [Actinomyces odontolyticus ATCC 17982]
Length = 270
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 83/164 (50%), Gaps = 18/164 (10%)
Query: 11 STKTSLKISKGDISRWCVDRSSDAIVSPTNEILL---LGGFTA--AAIHEAAGPDLQKAC 65
ST + + +GDI+R VD AIV+ N LL G T AIH AAG +L++AC
Sbjct: 82 STHPRMALWRGDITRLEVD----AIVNAANSALLGCRAPGHTCIDNAIHSAAGLELRQAC 137
Query: 66 YQIPEAQPRVRCPPG----EARITPGFKLPVSHVIHTVGPVFNFHCNPE--DILRSAYKN 119
++ + R P G EA +TPGF LP VIHTVGP+ N E + L +Y+
Sbjct: 138 AEVMAERTRGDGPSGFPTGEAVLTPGFHLPSRFVIHTVGPIVNGELTDEHREALACSYQR 197
Query: 120 CLSVGKANNIQYIAFPAISCGV---SQIMTHAIKLQTNCGFLES 160
CL A+ + +AF IS GV Q I + T FLES
Sbjct: 198 CLEEAAAHGLNTVAFCCISTGVFGFPQEEAARIAVSTVADFLES 241
>gi|378734612|gb|EHY61071.1| RNA-directed RNA polymerase [Exophiala dermatitidis NIH/UT8656]
Length = 235
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 65/122 (53%), Gaps = 10/122 (8%)
Query: 20 KGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPP 79
+ DI++ VD AIV+ N L G AIH+AAGP L K C + C
Sbjct: 55 QADITKLQVD----AIVNAANSGLRGGSGVDGAIHKAAGPGLLKECATLGG------CET 104
Query: 80 GEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISC 139
G A++T + LP VIH VGP+F+ E +LRS Y+ LS+ N + IAFPAIS
Sbjct: 105 GSAKVTEAYNLPCKKVIHAVGPIFHSIEKSEPLLRSCYRTSLSLAVENGCRTIAFPAIST 164
Query: 140 GV 141
GV
Sbjct: 165 GV 166
>gi|358063516|ref|ZP_09150127.1| hypothetical protein HMPREF9473_02189 [Clostridium hathewayi
WAL-18680]
gi|356698309|gb|EHI59858.1| hypothetical protein HMPREF9473_02189 [Clostridium hathewayi
WAL-18680]
Length = 264
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 75/132 (56%), Gaps = 12/132 (9%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILL-----LGGFTAAAIHEAAGPDLQKACYQIPE 70
+ I +GDI+R VD AIV+ N LL G AIH AAG +L++ C +I E
Sbjct: 91 ISIWQGDITRLKVD----AIVNAANSQLLGCFVPCHGCIDNAIHSAAGLELREECAKIME 146
Query: 71 AQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDI--LRSAYKNCLSVGKANN 128
+Q + P G+A+IT + LP HV+HTVGP+ + D L+S Y++C+ + ++
Sbjct: 147 SQ-QTEEPTGQAKITNAYNLPCRHVLHTVGPIIGWSLTDNDCEQLKSCYRSCMDLADEHH 205
Query: 129 IQYIAFPAISCG 140
++ IAF IS G
Sbjct: 206 LESIAFCCISTG 217
>gi|390567278|ref|ZP_10247620.1| appr-1-p processing domain-containing protein [Burkholderia terrae
BS001]
gi|389940665|gb|EIN02452.1| appr-1-p processing domain-containing protein [Burkholderia terrae
BS001]
Length = 183
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 60/110 (54%), Gaps = 7/110 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
D IV+ N LL GG AIH AAGPDL + C + C G+A+IT G +L
Sbjct: 22 DVIVNAANTSLLGGGGVDGAIHRAAGPDLLRECETLGG------CVTGDAKITGGHRLKA 75
Query: 93 SHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
HVIH VGPV+ E +L + Y+ L + + + IAFPAISCGV
Sbjct: 76 RHVIHAVGPVWQGGERGEAKLLAACYRRSLELARDAKAKGIAFPAISCGV 125
>gi|357055566|ref|ZP_09116634.1| hypothetical protein HMPREF9467_03606 [Clostridium clostridioforme
2_1_49FAA]
gi|355382685|gb|EHG29782.1| hypothetical protein HMPREF9467_03606 [Clostridium clostridioforme
2_1_49FAA]
Length = 176
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 67/122 (54%), Gaps = 10/122 (8%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPG 80
GDI++ DAIV+ N LL GG AIH AAG +L C + C G
Sbjct: 14 GDITKIT---GMDAIVNAANSSLLGGGGVDGAIHRAAGKELLHECRLLGG------CKTG 64
Query: 81 EARITPGFKLPVSHVIHTVGPVFNFH-CNPEDILRSAYKNCLSVGKANNIQYIAFPAISC 139
+A+IT + + ++IHTVGPV+N C ++ L S Y+N L + N ++ IAFP++S
Sbjct: 65 QAKITNAYNMDCRYIIHTVGPVWNGGICGEQEKLSSCYRNSLLLALENGVKRIAFPSVST 124
Query: 140 GV 141
G+
Sbjct: 125 GI 126
>gi|443242577|ref|YP_007375802.1| Appr-1-p processing enzyme family protein [Nonlabens dokdonensis
DSW-6]
gi|442799976|gb|AGC75781.1| Appr-1-p processing enzyme family protein [Nonlabens dokdonensis
DSW-6]
Length = 171
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 70/128 (54%), Gaps = 7/128 (5%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
++KI +GDI+ S++AIV+ N LL G AIH G + +AC +I AQ +
Sbjct: 2 NIKIIQGDITTV----STEAIVNAANSSLLGGSGVDGAIHRKGGTAILEACKKIKAAQGK 57
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFN-FHCNPEDILRSAYKNCLSVGKANNIQYIA 133
C G+A IT KLP +VIHTVGPV+N C +L Y+N + + + IA
Sbjct: 58 --CAVGQAVITTAGKLPAQYVIHTVGPVWNDGGCEKVQLLSQCYENAMKLAINQHSNSIA 115
Query: 134 FPAISCGV 141
FP IS G+
Sbjct: 116 FPCISTGI 123
>gi|393221648|gb|EJD07133.1| A1pp-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 206
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 67/124 (54%), Gaps = 12/124 (9%)
Query: 20 KGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPP 79
+GDI+ VD IV+ N+ LL GG AIH AAG L + C + C
Sbjct: 48 QGDITTLEVD----VIVNAANKSLLGGGGVDGAIHRAAGRQLLEECRLLGG------CDT 97
Query: 80 GEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSA--YKNCLSVGKANNIQYIAFPAI 137
G+A+IT G+ LP HVIHTVGPV+ ++ A Y+ LS+ N ++ IAFP+I
Sbjct: 98 GDAKITKGYNLPAKHVIHTVGPVYAMSKAETKAVQLAPCYRRSLSLAVENALKSIAFPSI 157
Query: 138 SCGV 141
S G+
Sbjct: 158 STGI 161
>gi|251793733|ref|YP_003008463.1| hypothetical protein NT05HA_2062 [Aggregatibacter aphrophilus
NJ8700]
gi|416893689|ref|ZP_11924781.1| hypothetical protein ATCC33389_1901 [Aggregatibacter aphrophilus
ATCC 33389]
gi|422337724|ref|ZP_16418694.1| hypothetical protein HMPREF9335_01882 [Aggregatibacter aphrophilus
F0387]
gi|247535130|gb|ACS98376.1| hypothetical protein NT05HA_2062 [Aggregatibacter aphrophilus
NJ8700]
gi|347813746|gb|EGY30400.1| hypothetical protein ATCC33389_1901 [Aggregatibacter aphrophilus
ATCC 33389]
gi|353345056|gb|EHB89354.1| hypothetical protein HMPREF9335_01882 [Aggregatibacter aphrophilus
F0387]
Length = 249
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 72/128 (56%), Gaps = 12/128 (9%)
Query: 20 KGDISRWCVDRSSDAIVSPTNEILL-----LGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+GDI+R +DAIV+ N LL L AIH AAG L++AC+++ E Q +
Sbjct: 79 QGDITRL----QTDAIVNAANSQLLGCFHPLHACIDNAIHSAAGLQLRQACFELMEKQGQ 134
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED--ILRSAYKNCLSVGKANNIQYI 132
G+A+ITP F LP V+HTVGP+ + N D +L Y++CL + K N++ +
Sbjct: 135 PEAT-GKAKITPAFNLPSKFVLHTVGPIIYENVNETDRTLLADCYRSCLKLAKTNDLNSV 193
Query: 133 AFPAISCG 140
AF IS G
Sbjct: 194 AFCCISTG 201
>gi|373956478|ref|ZP_09616438.1| Appr-1-p processing domain protein [Mucilaginibacter paludis DSM
18603]
gi|373893078|gb|EHQ28975.1| Appr-1-p processing domain protein [Mucilaginibacter paludis DSM
18603]
Length = 181
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 68/127 (53%), Gaps = 7/127 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+K+ KGDI++ VD AIV+ N LL GG AIH A G + + C I Q
Sbjct: 5 IKLVKGDITKIEVD----AIVNAANSSLLGGGGVDGAIHRAGGKAILEECIAIRNKQGG- 59
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFN-FHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C GEA IT G L +VIHTVGPV+N +L + Y+N L + + ++ IAF
Sbjct: 60 -CQTGEAVITTGGSLDAKYVIHTVGPVWNKVKTKLSMLLANCYQNSLQLAVEHQVKTIAF 118
Query: 135 PAISCGV 141
P IS G+
Sbjct: 119 PNISTGI 125
>gi|256545430|ref|ZP_05472792.1| RNase III regulator YmdB [Anaerococcus vaginalis ATCC 51170]
gi|256398826|gb|EEU12441.1| RNase III regulator YmdB [Anaerococcus vaginalis ATCC 51170]
Length = 163
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 72/130 (55%), Gaps = 13/130 (10%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPD-LQKACYQIPEAQP 73
+LK+ DI + VD AIV+ N L+ GG I E AG + L+KAC ++ +P
Sbjct: 2 TLKVIDIDILKLNVD----AIVNAANVDLIEGGGICGQIFEKAGREKLKKACLKLSPIKP 57
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFN--FHCNPEDILRSAYKNCLSVGKANNIQY 131
GEA IT GF L ++IH VGPV+N + + IL+ AYKN L + K I+
Sbjct: 58 ------GEAVITDGFNLYQKYIIHAVGPVYNEMYKEACQKILQDAYKNSLKIAKKKGIKS 111
Query: 132 IAFPAISCGV 141
IAFP IS G+
Sbjct: 112 IAFPLISSGI 121
>gi|317152584|ref|YP_004120632.1| Appr-1-p processing protein [Desulfovibrio aespoeensis Aspo-2]
gi|316942835|gb|ADU61886.1| Appr-1-p processing domain protein [Desulfovibrio aespoeensis
Aspo-2]
Length = 186
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 74/130 (56%), Gaps = 9/130 (6%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAG-PDLQKACYQI---PEA 71
L I +GDI+ VD +V+ N L GG AIH AAG L++AC I P
Sbjct: 11 LVIRQGDITTLDVD----CVVNAANPQLAGGGGVDGAIHRAAGIAQLRQACQAIIDDPGQ 66
Query: 72 QPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQ 130
P + P G+A +T GF LP ++IHTVGP++ + E + LRS+Y++ L + + +
Sbjct: 67 LPTGQLPVGQAVLTLGFDLPARYIIHTVGPIWRGGVHGESEQLRSSYQSSLKLAHQHALA 126
Query: 131 YIAFPAISCG 140
IAFPA+SCG
Sbjct: 127 TIAFPALSCG 136
>gi|402756704|ref|ZP_10858960.1| Appr-1-p processing protein [Acinetobacter sp. NCTC 7422]
Length = 176
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 68/128 (53%), Gaps = 7/128 (5%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
S+ I KGDI++ VD AIV+ N LL GG AIH G + C +I Q
Sbjct: 3 SINIIKGDITQIVVD----AIVNAANTSLLGGGGVDGAIHRQGGAAILADCQKIRAKQGG 58
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
C GEA +T LP +VIHTVGP + + +L +AY+NC + + ++++A
Sbjct: 59 --CAVGEAVVTTAGNLPAKYVIHTVGPTWVDGQHQEARLLENAYRNCFKLAEQLELEHVA 116
Query: 134 FPAISCGV 141
FP IS G+
Sbjct: 117 FPNISTGI 124
>gi|306831174|ref|ZP_07464335.1| appr-1-p processing enzyme family domain protein [Streptococcus
gallolyticus subsp. gallolyticus TX20005]
gi|304426740|gb|EFM29851.1| appr-1-p processing enzyme family domain protein [Streptococcus
gallolyticus subsp. gallolyticus TX20005]
Length = 260
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 82/159 (51%), Gaps = 16/159 (10%)
Query: 12 TKTSLKISKGDISRWCVDRSSDAIVSPTNEILL-----LGGFTAAAIHEAAGPDLQKACY 66
T L + KGDI+R VD AIV+ N +L L AIH AG L+ CY
Sbjct: 81 TDDCLYVWKGDITRLKVD----AIVNAANRRMLGCFQPLHDCADNAIHTYAGVQLRLDCY 136
Query: 67 QIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNP--EDILRSAYKNCLSVG 124
++ + Q P G A+ITP + LP V+HTV P N H P ED+L +Y +CL++
Sbjct: 137 KLMQEQGHDE-PTGTAKITPAYNLPAKFVLHTVSPAINEHLTPIDEDLLAKSYLSCLTLA 195
Query: 125 KANNIQYIAFPAISCG--VSQIMTHA--IKLQTNCGFLE 159
+ N ++ +A +++ V I +A I +QT FLE
Sbjct: 196 EKNRLESVALSSLATDDEVHFINENAARIAIQTAKDFLE 234
>gi|332655424|ref|ZP_08421163.1| appr-1-p processing enzyme domain protein [Ruminococcaceae
bacterium D16]
gi|332515719|gb|EGJ45330.1| appr-1-p processing enzyme domain protein [Ruminococcaceae
bacterium D16]
Length = 345
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 68/127 (53%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L+I + DI++ VD AIV+ NE LL GG IH AAGP+L C +
Sbjct: 3 LQIVRNDITKMKVD----AIVNAANESLLGGGGVDGCIHRAAGPELLTECETLH------ 52
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPV-FNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C G A+IT G++LP +VIH VGP ++ ++L S Y+ L + K + +AF
Sbjct: 53 GCKTGSAKITKGYRLPCKYVIHAVGPRWYDGRHRERELLISCYRTSLMLAKEYGCESVAF 112
Query: 135 PAISCGV 141
P IS G+
Sbjct: 113 PLISSGI 119
>gi|316935226|ref|YP_004110208.1| Appr-1-p processing protein [Rhodopseudomonas palustris DX-1]
gi|315602940|gb|ADU45475.1| Appr-1-p processing domain protein [Rhodopseudomonas palustris
DX-1]
Length = 180
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 61/110 (55%), Gaps = 7/110 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAGP+L C + C G+ARIT G++LP
Sbjct: 26 DAIVNAANASLLGGGGVDGAIHRAAGPELLAECETLGG------CDTGDARITRGYRLPA 79
Query: 93 SHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
HVIH VGP+++ + ED L S Y L + + + IAF AIS GV
Sbjct: 80 RHVIHAVGPIWHGGRHGEDAALASCYARALQLANDHALSSIAFSAISTGV 129
>gi|421144246|ref|ZP_15604162.1| ATPase associated with chromosome architecture/replication
[Fusobacterium nucleatum subsp. fusiforme ATCC 51190]
gi|395489347|gb|EJG10186.1| ATPase associated with chromosome architecture/replication
[Fusobacterium nucleatum subsp. fusiforme ATCC 51190]
Length = 175
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 77/152 (50%), Gaps = 13/152 (8%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K +K+ GDI++ +AIV+ N L +GG AI AAG L K C +I
Sbjct: 3 KDIIKLVSGDITKI---PEVEAIVNAANTSLEMGGGVCGAIFRAAGSYLAKECKEIG--- 56
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQY 131
C GEA IT G+ LP ++IHTVGP ++ N E + L SAY L + K I+
Sbjct: 57 ---GCNTGEAVITKGYNLPNKYIIHTVGPKYSTGENGEAERLTSAYYESLKLAKKKGIRK 113
Query: 132 IAFPAISCGVSQI---MTHAIKLQTNCGFLES 160
IAFP+IS G+ + I L T FL+
Sbjct: 114 IAFPSISTGIYRFPIDEGSEIALNTAIKFLDE 145
>gi|421464676|ref|ZP_15913366.1| putative RNase III regulator YmdB [Acinetobacter radioresistens
WC-A-157]
gi|421855095|ref|ZP_16287476.1| hypothetical protein ACRAD_06_00230 [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
gi|400205429|gb|EJO36410.1| putative RNase III regulator YmdB [Acinetobacter radioresistens
WC-A-157]
gi|403189413|dbj|GAB73677.1| hypothetical protein ACRAD_06_00230 [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
Length = 186
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
++ GDI+ +D AIV+ N LL G AIH+A G D+ + C QI Q
Sbjct: 3 QFRLIHGDITGIRID----AIVNAANSTLLGGHGVDGAIHQAGGADIIEECRQIRARQGS 58
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIA 133
C GEA +T G +LP +VIHTVGP++ N +L AY+N ++ + + + IA
Sbjct: 59 --CTVGEAVMTTGGRLPAQYVIHTVGPIWEEGKANERTLLSQAYQNSFALAEQHYLTGIA 116
Query: 134 FPAISCGV 141
+P IS GV
Sbjct: 117 YPNISTGV 124
>gi|171779373|ref|ZP_02920337.1| hypothetical protein STRINF_01218 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171281990|gb|EDT47421.1| macro domain protein [Streptococcus infantarius subsp. infantarius
ATCC BAA-102]
Length = 260
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 71/138 (51%), Gaps = 12/138 (8%)
Query: 10 FSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILL-----LGGFTAAAIHEAAGPDLQKA 64
+T L + KGDISR VD AIV+ N +L L T IH AG L+
Sbjct: 79 LATDDRLYVWKGDISRLQVD----AIVNTANRQMLGCFQPLHECTDNTIHTYAGVQLRLE 134
Query: 65 CYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE--DILRSAYKNCLS 122
CY + + Q P G A+ITPG+ LP ++HTVGP N H D+L +Y +CL+
Sbjct: 135 CYNLMKDQGHDE-PEGSAKITPGYNLPAKFILHTVGPAINEHLTESDADLLAQSYLSCLT 193
Query: 123 VGKANNIQYIAFPAISCG 140
+ + N I+ +A +++
Sbjct: 194 LAEKNQIESVALSSLATN 211
>gi|333896927|ref|YP_004470801.1| Appr-1-p processing domain-containing protein
[Thermoanaerobacterium xylanolyticum LX-11]
gi|333112192|gb|AEF17129.1| Appr-1-p processing domain protein [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 173
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 72/129 (55%), Gaps = 7/129 (5%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K +K+ KGDI+ VD AIV+ N LL GG AIH A G + + C +I + +
Sbjct: 2 KEKIKLLKGDITEQEVD----AIVNAANSGLLGGGGVDGAIHRAGGKVIDEECREIRDRE 57
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED-ILRSAYKNCLSVGKANNIQY 131
CP G+A IT G L S+VIH VGP++ N ED +L SAY L + N++
Sbjct: 58 GG--CPTGKAVITHGGNLKASYVIHAVGPIWKDGDNDEDNLLASAYIESLKIADKYNLKT 115
Query: 132 IAFPAISCG 140
IAFP+IS G
Sbjct: 116 IAFPSISTG 124
>gi|423017356|ref|ZP_17008077.1| Appr-1-p processing domain-containing protein [Achromobacter
xylosoxidans AXX-A]
gi|338779634|gb|EGP44071.1| Appr-1-p processing domain-containing protein [Achromobacter
xylosoxidans AXX-A]
Length = 174
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 71/129 (55%), Gaps = 11/129 (8%)
Query: 14 TSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQP 73
T+L+ + DI++ VD AIV+ N LL GG AIH AAGPDL C +
Sbjct: 5 TNLRAIQSDITKLHVD----AIVNAANSSLLGGGGVDGAIHRAAGPDLVHECRLLGG--- 57
Query: 74 RVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYI 132
C G+A+ T ++L ++IHTVGPV+ N E +L + Y+ C+++ + I
Sbjct: 58 ---CKTGDAKATKAYRLSAQYIIHTVGPVWRGGDNGEPALLSNCYRRCIALAEERGAASI 114
Query: 133 AFPAISCGV 141
AFP+IS G+
Sbjct: 115 AFPSISTGI 123
>gi|339239499|ref|XP_003381304.1| MACRO domain-containing protein 1 [Trichinella spiralis]
gi|316975673|gb|EFV59080.1| MACRO domain-containing protein 1 [Trichinella spiralis]
Length = 187
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 72/135 (53%), Gaps = 14/135 (10%)
Query: 10 FSTKTSLKISKGDISRWCVDRSS---DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACY 66
F +++++K S W D +S +AIV+ N L +GG AIH AAG +L K
Sbjct: 29 FHCDRNVEMAK-KFSLWQGDITSLEINAIVNAANSALRVGGGVDGAIHRAAGKELSK--- 84
Query: 67 QIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKA 126
E C PG A+IT G++LP +VIHTVGP NPE L+S YKNC +
Sbjct: 85 ---ETATLGGCAPGCAKITHGYRLPAKYVIHTVGPTDG---NPE-TLKSCYKNCFDICNK 137
Query: 127 NNIQYIAFPAISCGV 141
++ IAFP + G+
Sbjct: 138 KALKSIAFPCVGTGI 152
>gi|256391430|ref|YP_003112994.1| Appr-1-p processing protein [Catenulispora acidiphila DSM 44928]
gi|256357656|gb|ACU71153.1| Appr-1-p processing domain protein [Catenulispora acidiphila DSM
44928]
Length = 185
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 71/126 (56%), Gaps = 4/126 (3%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ + +GDI++ + +DAIV+ N LL GG AIH A GP++ +AC + +
Sbjct: 19 ITLIRGDITK----QHADAIVNAANSSLLGGGGVDGAIHRAGGPEILEACRALRASHYGR 74
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFP 135
P G+A T +LP VIHTVGPV++ + + +L + + N L+V + IAFP
Sbjct: 75 GLPTGQAVATTAGRLPAHWVIHTVGPVYSPNDDRSALLTACHTNSLAVADTLGAKTIAFP 134
Query: 136 AISCGV 141
AIS G+
Sbjct: 135 AISTGI 140
>gi|440799010|gb|ELR20071.1| MACRO domain containing protein 1, putative [Acanthamoeba
castellanii str. Neff]
Length = 559
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 50/122 (40%), Positives = 63/122 (51%), Gaps = 14/122 (11%)
Query: 20 KGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPP 79
+GDI+ +D AIV+ N +L GG AIH AAG DL C Q+ C
Sbjct: 255 RGDITHLEID----AIVNAANRSMLGGGGIDGAIHRAAGDDLYNECKQLNG------CAT 304
Query: 80 GEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISC 139
G +IT G+ LP +VIHTVGP+ LRS Y NCL V AN + +AF IS
Sbjct: 305 GHCKITRGYSLPAKYVIHTVGPIGEHPV----ALRSCYLNCLRVAVANGARSLAFCGIST 360
Query: 140 GV 141
G+
Sbjct: 361 GI 362
>gi|373251992|ref|ZP_09540110.1| RNase III inhibitor [Nesterenkonia sp. F]
Length = 179
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 15 SLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPR 74
+ I +GDI+ + DAIV N L GG AIH AAGP+L C+ + E
Sbjct: 2 DITIVEGDITA----QQIDAIVDAANSSLTGGGGVDGAIHAAAGPELLAHCHVLREEAWP 57
Query: 75 VRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPED--ILRSAYKNCLSVGKANNIQYI 132
PPGEA TP +LP +HVIHTVGP N H D +L S ++ L V + +
Sbjct: 58 DGLPPGEAAATPPGRLPATHVIHTVGP--NRHAGQIDPSVLISCFRRSLEVAVEIDAVRV 115
Query: 133 AFPAISCGV 141
AFPAI GV
Sbjct: 116 AFPAIGAGV 124
>gi|257440113|ref|ZP_05615868.1| RNase III regulator YmdB [Faecalibacterium prausnitzii A2-165]
gi|257197465|gb|EEU95749.1| macro domain protein [Faecalibacterium prausnitzii A2-165]
Length = 345
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 68/127 (53%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L+I + DI++ VD AIV+ NE LL GG IH AAGP+L C +
Sbjct: 3 LQIVRNDITKMKVD----AIVNAANESLLGGGGVDGCIHRAAGPELLTECETLHG----- 53
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPV-FNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C G A+IT G++LP +VIH VGP ++ ++L S Y+ L + K + +AF
Sbjct: 54 -CKTGSAKITKGYRLPCKYVIHAVGPRWYDGRHRERELLISCYRTSLMLAKEYGCESVAF 112
Query: 135 PAISCGV 141
P IS G+
Sbjct: 113 PLISSGI 119
>gi|209732472|gb|ACI67105.1| MACRO domain-containing protein 1 [Salmo salar]
Length = 391
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 65/123 (52%), Gaps = 12/123 (9%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPG 80
GDI++ +D IV+ N+ LL GG AIH AGP L+ C ++ C G
Sbjct: 218 GDITKLEID----GIVNAANKTLLGGGGVDGAIHRTAGPLLRSECAELRG------CETG 267
Query: 81 EARITPGFKLPVSHVIHTVGPVFNFHCNPED--ILRSAYKNCLSVGKANNIQYIAFPAIS 138
EA+IT G+ LP +VIHTVGP+ E+ LR Y++ L ++ +AFP IS
Sbjct: 268 EAKITGGYGLPAKYVIHTVGPIAMGEVGEEERSRLRDCYRHSLQKATDTKLRTVAFPCIS 327
Query: 139 CGV 141
G+
Sbjct: 328 TGI 330
>gi|422325933|ref|ZP_16406961.1| hypothetical protein HMPREF0981_00281 [Erysipelotrichaceae
bacterium 6_1_45]
gi|371667096|gb|EHO32227.1| hypothetical protein HMPREF0981_00281 [Erysipelotrichaceae
bacterium 6_1_45]
Length = 347
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 68/127 (53%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L+I + DI++ VD AIV+ NE LL GG IH AAGP+L C +
Sbjct: 3 LQIVRNDITKMKVD----AIVNAANESLLGGGGVDGCIHRAAGPELLAECETLH------ 52
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPV-FNFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C G A+IT G+KLP +VIH VGP ++ ++L S Y+ L + K + +AF
Sbjct: 53 GCKTGSAKITKGYKLPCKYVIHAVGPRWYDGRHGERELLISCYQTSLMLAKKYGCESVAF 112
Query: 135 PAISCGV 141
P IS G+
Sbjct: 113 PLISSGI 119
>gi|425781425|gb|EKV19394.1| LRP16 family protein [Penicillium digitatum Pd1]
Length = 161
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 54/95 (56%), Gaps = 6/95 (6%)
Query: 46 GGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNF 105
GG AIH AAGP L + CY + C G+A+IT + LP VIHTVGP++
Sbjct: 7 GGGVDGAIHRAAGPKLVEECYHLD------GCETGDAKITSAYDLPCKRVIHTVGPIYRR 60
Query: 106 HCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCG 140
+P +LRS Y+ L V N+++ IAF AIS G
Sbjct: 61 EADPVALLRSCYRRSLEVAVENDMKSIAFAAISTG 95
>gi|381151017|ref|ZP_09862886.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Methylomicrobium album BG8]
gi|380882989|gb|EIC28866.1| putative phosphatase, C-terminal domain of histone macro H2A1 like
protein [Methylomicrobium album BG8]
Length = 172
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 63/110 (57%), Gaps = 7/110 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAGP+L + C + C G+A++T G++LP
Sbjct: 18 DAIVNAANGSLLGGGGVDGAIHRAAGPELLRECRTLGG------CEIGDAKLTGGYRLPA 71
Query: 93 SHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
+VIHTVGPV+ E + L S Y+ L + + I+ +AFP I+ G+
Sbjct: 72 RYVIHTVGPVWRGGVRNEPERLASCYRRSLEIAAEHGIRTLAFPCIATGI 121
>gi|213514150|ref|NP_001133595.1| MACRO domain-containing protein 1 [Salmo salar]
gi|209154620|gb|ACI33542.1| MACRO domain-containing protein 1 [Salmo salar]
Length = 385
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 65/123 (52%), Gaps = 12/123 (9%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPG 80
GDI++ +D IV+ N+ LL GG AIH AGP L+ C ++ C G
Sbjct: 218 GDITKLEID----GIVNAANKTLLGGGGVDGAIHRTAGPLLRSECAELRG------CETG 267
Query: 81 EARITPGFKLPVSHVIHTVGPVFNFHCNPED--ILRSAYKNCLSVGKANNIQYIAFPAIS 138
EA+IT G+ LP +VIHTVGP+ E+ LR Y++ L ++ +AFP IS
Sbjct: 268 EAKITGGYGLPAKYVIHTVGPIAMGEVGEEERSRLRDCYRHSLQKATDTKLRTVAFPCIS 327
Query: 139 CGV 141
G+
Sbjct: 328 TGI 330
>gi|332880353|ref|ZP_08448031.1| macro domain protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|357047446|ref|ZP_09109051.1| macro domain protein [Paraprevotella clara YIT 11840]
gi|332681798|gb|EGJ54717.1| macro domain protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|355529517|gb|EHG98944.1| macro domain protein [Paraprevotella clara YIT 11840]
Length = 174
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 74/131 (56%), Gaps = 13/131 (9%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
K +KI GDI++ VD AIV+ N LL GG AIH AAG +L + C +
Sbjct: 2 KDRIKIIVGDITQLQVD----AIVNAANCSLLGGGGVDGAIHRAAGKELLEECRTLGG-- 55
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVFN--FHCNPEDILRSAYKNCLSVGKANNIQ 130
C GE+++T ++LP +IHTVGPV++ H PE +L S Y L + + ++++
Sbjct: 56 ----CRTGESKMTGAYRLPCKKIIHTVGPVWHGGGHHEPE-LLASCYATALQMAETHHLK 110
Query: 131 YIAFPAISCGV 141
IAFP IS GV
Sbjct: 111 SIAFPCISTGV 121
>gi|240275106|gb|EER38621.1| LRP16 family protein [Ajellomyces capsulatus H143]
gi|325094463|gb|EGC47773.1| LRP16 family protein [Ajellomyces capsulatus H88]
Length = 330
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 73/137 (53%), Gaps = 16/137 (11%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
D IV+ N+ LL GG AIH AAG L + C + C G+A+IT + LP
Sbjct: 55 DCIVNAANKSLLGGGGVDGAIHRAAGRGLLQECRAL------GGCATGDAKITNAYNLPC 108
Query: 93 SHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFPAISCGV--------SQI 144
+VIH VGP+F N E LRS Y L++ + ++ IAFPAIS GV +++
Sbjct: 109 RNVIHAVGPMFWADENRESFLRSCYSRSLALAAESGLKSIAFPAISTGVYGYPSLKAAEV 168
Query: 145 MTHAIK--LQTNCGFLE 159
A++ L+T+ G LE
Sbjct: 169 AISAVRHFLETSPGPLE 185
>gi|332671861|ref|YP_004454869.1| Appr-1-p processing domain-containing protein [Cellulomonas fimi
ATCC 484]
gi|332340899|gb|AEE47482.1| Appr-1-p processing domain protein [Cellulomonas fimi ATCC 484]
Length = 186
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 65/125 (52%), Gaps = 4/125 (3%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
++ ++GDI+ VD A+V+ N LL GG AIH AAGP L +AC ++ +
Sbjct: 3 IEAARGDITTQDVD----AVVNAANSTLLGGGGVDGAIHAAAGPRLLEACRRLRRTELPD 58
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNCLSVGKANNIQYIAFP 135
P G+A +TPGF LP V+HTVGP +N L S + L IAFP
Sbjct: 59 GLPVGDAVVTPGFDLPARWVVHTVGPNWNRGQRERADLASCFTRSLERAVEVGASSIAFP 118
Query: 136 AISCG 140
AIS G
Sbjct: 119 AISAG 123
>gi|260892300|ref|YP_003238397.1| Appr-1-p processing protein [Ammonifex degensii KC4]
gi|260864441|gb|ACX51547.1| Appr-1-p processing domain protein [Ammonifex degensii KC4]
Length = 175
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 74/140 (52%), Gaps = 15/140 (10%)
Query: 1 MTFKVQTLSFSTKTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPD 60
M KV+ L+ ++ +GDI+R DA+V+ N L GG A AIH AAGP+
Sbjct: 1 MEKKVEGLT------IECVQGDITR---QEGFDAVVNAANAWLRPGGGVAGAIHRAAGPE 51
Query: 61 LQKACYQIPEAQPRVRCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPEDILRSAYKNC 120
L++ C + PG+A IT ++LP ++IH +GP + ++L + Y+N
Sbjct: 52 LEEECRSL------APISPGQAVITGAYRLPNRYIIHCLGPRYGIDEPAAELLAACYRNA 105
Query: 121 LSVGKANNIQYIAFPAISCG 140
L + + + +AFPAIS G
Sbjct: 106 LRLAEEKGLSSVAFPAISTG 125
>gi|402225057|gb|EJU05119.1| A1pp-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 193
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 73/146 (50%), Gaps = 17/146 (11%)
Query: 20 KGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPP 79
+GDI+R SD IVS + LL GG AIH AAG DL C + A
Sbjct: 24 QGDITRL----QSDVIVSAAHRSLLGGGGVDGAIHRAAGEDLYDECLTLGGANT------ 73
Query: 80 GEARITPGFKLPVSHVIHTVGPVFNFHCNPEDI--LRSAYKNCLSVGKANNIQYIAFPAI 137
GEA++T G+ LP HVIH VGP+++ + L S Y+ + N ++ IAFP+I
Sbjct: 74 GEAKMTKGYNLPAKHVIHAVGPIYSDSQLDQKAQQLASCYRTSYELAAQNKLRSIAFPSI 133
Query: 138 SCGVS----QIMTHAIKLQTNCGFLE 159
S G+ + TH I L FLE
Sbjct: 134 STGIYGYPIENATH-IALDVTRKFLE 158
>gi|400293635|ref|ZP_10795494.1| macro domain protein [Actinomyces naeslundii str. Howell 279]
gi|399901250|gb|EJN84146.1| macro domain protein [Actinomyces naeslundii str. Howell 279]
Length = 182
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 65/123 (52%), Gaps = 8/123 (6%)
Query: 21 GDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPG 80
GDI+ VD AIV+ N LL GG AIH AAGP L +AC ++ + P G
Sbjct: 8 GDITTENVD----AIVNAANSTLLGGGGVDGAIHRAAGPRLLEACQKVRATELPDGLPVG 63
Query: 81 EARITPGFKLPVSHVIHTVGPVFNFHCNPED--ILRSAYKNCLSVGKANNIQYIAFPAIS 138
A TPGF LP + VIHTVGP N H +D +LR+ + L + IA PA+S
Sbjct: 64 RAVATPGFDLPATWVIHTVGP--NRHAGEDDPVLLRACFDGSLELAIQLGCSSIALPAVS 121
Query: 139 CGV 141
GV
Sbjct: 122 AGV 124
>gi|150005775|ref|YP_001300519.1| phosphatase [Bacteroides vulgatus ATCC 8482]
gi|149934199|gb|ABR40897.1| conserved hypothetical protein, putative phosphatase [Bacteroides
vulgatus ATCC 8482]
Length = 208
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 60/110 (54%), Gaps = 7/110 (6%)
Query: 33 DAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRVRCPPGEARITPGFKLPV 92
DAIV+ N LL GG AIH AAGP L C + CP GE++IT + LP
Sbjct: 58 DAIVNAANCSLLGGGGVDGAIHRAAGPALLAECKTLG------GCPTGESKITDAYNLPC 111
Query: 93 SHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAFPAISCGV 141
VIHTVGPV++ + E + L S Y + K N IQ IAFP IS GV
Sbjct: 112 RKVIHTVGPVWHGGMHGEAEKLASCYHTSFILAKENGIQSIAFPCISTGV 161
>gi|407006278|gb|EKE22221.1| Appr-1-p processing protein [uncultured bacterium]
Length = 169
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 71/130 (54%), Gaps = 11/130 (8%)
Query: 13 KTSLKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQ 72
KT L KGDI++ VD AIV+ N LL GG IH AG +L + C +
Sbjct: 2 KTELISIKGDITKIEVD----AIVNSANRRLLGGGGVDGVIHRVAGEELYQECLTLG--- 54
Query: 73 PRVRCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQY 131
C GEA+IT G+KLP VIHTVGP++ N + D+LRS Y L + N ++
Sbjct: 55 ---GCMEGEAKITKGYKLPAKWVIHTVGPIYGNENGREADMLRSCYTMSLYLAVDNGVKT 111
Query: 132 IAFPAISCGV 141
I+FP IS GV
Sbjct: 112 ISFPNISTGV 121
>gi|320527828|ref|ZP_08028996.1| macro domain protein [Solobacterium moorei F0204]
gi|320131765|gb|EFW24327.1| macro domain protein [Solobacterium moorei F0204]
Length = 331
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 70/127 (55%), Gaps = 11/127 (8%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
L+I + DI++ VD AIV+ N+ LL GG IH AAGP+L C +
Sbjct: 3 LQIVRNDITKMKVD----AIVNAANKSLLGGGGVDGCIHRAAGPELLAECKLLN------ 52
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVF-NFHCNPEDILRSAYKNCLSVGKANNIQYIAF 134
C G A+IT G++LP +VIH VGP + + C+ +++L S Y L + K + IAF
Sbjct: 53 GCEIGSAKITKGYQLPCMYVIHAVGPRWIDGSCHEKELLESCYTTSLLLAKDYGCKSIAF 112
Query: 135 PAISCGV 141
P IS G+
Sbjct: 113 PLISSGI 119
>gi|326204981|ref|ZP_08194832.1| Appr-1-p processing domain protein [Clostridium papyrosolvens DSM
2782]
gi|325984847|gb|EGD45692.1| Appr-1-p processing domain protein [Clostridium papyrosolvens DSM
2782]
Length = 175
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 69/127 (54%), Gaps = 7/127 (5%)
Query: 16 LKISKGDISRWCVDRSSDAIVSPTNEILLLGGFTAAAIHEAAGPDLQKACYQIPEAQPRV 75
+ + KGDI++ VD AIV+ N LL GG AIH+A G ++ + C +I Q
Sbjct: 9 ISVIKGDITKLEVD----AIVNAANSSLLGGGGVDGAIHKAGGREILEECIKIRNKQG-- 62
Query: 76 RCPPGEARITPGFKLPVSHVIHTVGPVFNFHCNPE-DILRSAYKNCLSVGKANNIQYIAF 134
C GEA IT L VIHTVGPV+N E ++L YKN + +N++ IA+
Sbjct: 63 GCAIGEAVITNAGYLKAKFVIHTVGPVWNEGTKGEVELLDRCYKNSFQLAHEHNVKSIAY 122
Query: 135 PAISCGV 141
P IS G+
Sbjct: 123 PCISTGI 129
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.135 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,772,515,286
Number of Sequences: 23463169
Number of extensions: 109281574
Number of successful extensions: 204996
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1721
Number of HSP's successfully gapped in prelim test: 1305
Number of HSP's that attempted gapping in prelim test: 199292
Number of HSP's gapped (non-prelim): 3245
length of query: 181
length of database: 8,064,228,071
effective HSP length: 133
effective length of query: 48
effective length of database: 9,238,593,890
effective search space: 443452506720
effective search space used: 443452506720
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 72 (32.3 bits)