BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030218
(181 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZWQ8|PAP_CITUN Plastid-lipid-associated protein, chloroplastic OS=Citrus unshiu
GN=PAP PE=2 SV=1
Length = 323
Score = 314 bits (804), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 154/158 (97%), Positives = 155/158 (98%)
Query: 1 MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLV 60
MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLV
Sbjct: 1 MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLV 60
Query: 61 LTRAADDDEWGPEKEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNATSET 120
LTRAADDDEWGPEKEKE GGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNATSET
Sbjct: 61 LTRAADDDEWGPEKEKEGGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNATSET 120
Query: 121 RAEIVELITQLEAKNPTPAPTEALTLLNAKWILVHIFF 158
RAEIVELITQLEAKNPTPAPTEALTLLNAKWILV+ F
Sbjct: 121 RAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSF 158
>sp|Q96398|CHRC_CUCSA Chromoplast-specific carotenoid-associated protein, chromoplast
OS=Cucumis sativus GN=CHRC PE=1 SV=1
Length = 322
Score = 168 bits (426), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/164 (58%), Positives = 116/164 (70%), Gaps = 12/164 (7%)
Query: 1 MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSV-RISRSLAKKSFLSIQGFTRARPL 59
MA +SQ NQ PCKTL+ NPP Q TSKPS+ P+ S+ +R+ A KS +S+ RP
Sbjct: 1 MAFVSQFNQLPCKTLALNPPQPQLTSKPSVFPIASIGATARAAAGKSLISV------RPA 54
Query: 60 VLTRAA-DDDEWGPEKEKEEGG----ALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGL 114
RA +DDEWG +K+++ G A+A EEE P E +EI LKKALVDSFYGTDRGL
Sbjct: 55 FKVRAVLNDDEWGEDKDEKYGDDSSVAVAEKEEEKPLEPSEIYKLKKALVDSFYGTDRGL 114
Query: 115 NATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVHIFF 158
+ +TRAEIVELITQLE+KNPTPAPTEALTLLN KWIL + F
Sbjct: 115 RVSRDTRAEIVELITQLESKNPTPAPTEALTLLNGKWILAYTTF 158
>sp|O99019|LIPC_SOLDE Light-induced protein, chloroplastic OS=Solanum demissum PE=1 SV=1
Length = 326
Score = 150 bits (379), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 91/175 (52%), Positives = 118/175 (67%), Gaps = 4/175 (2%)
Query: 1 MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLV 60
MASIS NQ PCKTL +++ TSK S LP++S + +S++ FT +P
Sbjct: 1 MASISSLNQIPCKTLQITSQYSKPTSKISTLPISSTNFLSKTEQHRSISVKEFTNPKPKF 60
Query: 61 LTRAAD---DDEWGPEKEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNAT 117
+A + +DEWGPE E+ G +AV EEE PKE +EI+ LKK L DS YGT+RGL+A+
Sbjct: 61 TAQATNYDKEDEWGPEVEQIRPGGVAVVEEEPPKEPSEIELLKKQLADSLYGTNRGLSAS 120
Query: 118 SETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVHIFFR-FVSVVVKGNIAI 171
SETRAEIVELITQLE+KNP PAPTEALTLLN KWIL + F ++ +GN+ +
Sbjct: 121 SETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSFSGLFPLLSRGNLPL 175
>sp|P80471|LIPC_SOLTU Light-induced protein, chloroplastic OS=Solanum tuberosum PE=1 SV=2
Length = 326
Score = 149 bits (376), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/175 (52%), Positives = 117/175 (66%), Gaps = 4/175 (2%)
Query: 1 MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLV 60
MASIS NQ PCKTL +++ TSK S LP++S +S++ FT +P
Sbjct: 1 MASISSLNQIPCKTLQITSQYSKPTSKISTLPISSTNFPSKTELHRSISVKEFTNPKPKF 60
Query: 61 LTRAAD---DDEWGPEKEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNAT 117
+A + +DEWGPE E+ G +AV EEE PKE +EI+ LKK L DS YGT+RGL+A+
Sbjct: 61 TAQATNYDKEDEWGPEVEQIRPGGVAVVEEEPPKEPSEIELLKKQLADSLYGTNRGLSAS 120
Query: 118 SETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVHIFFR-FVSVVVKGNIAI 171
SETRAEIVELITQLE+KNP PAPTEALTLLN KWIL + F ++ +GN+ +
Sbjct: 121 SETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSFSGLFPLLSRGNLPL 175
>sp|Q94KU6|PAP2_BRACM Plastid lipid-associated protein 2, chloroplastic OS=Brassica
campestris GN=PAP2 PE=1 SV=1
Length = 319
Score = 129 bits (324), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 105/161 (65%), Gaps = 10/161 (6%)
Query: 1 MASISQTNQFPCKTLSQNPPHNQFTSKP--SILPLNSVRISRSLAKKSFLSIQGFTRARP 58
MA++ NQFPCKT Q+ +++ SKP S++P+++ L ++ F +R
Sbjct: 1 MATVQFFNQFPCKTRVQSSANSKPLSKPPSSLVPMSA------LTRRPSFPPGEFAVSRS 54
Query: 59 LVLTRAAD-DDEWGPEKEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNAT 117
R D +DE PE + G AL +AEE + + V E + LK++LVDS YGTDRGL+A+
Sbjct: 55 DFRVRVIDAEDELDPETSEGGGSALLMAEE-AIESVEETEVLKRSLVDSLYGTDRGLSAS 113
Query: 118 SETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVHIFF 158
SETRAEI +LITQLE+KNPTPAPT+AL LLN KWIL + F
Sbjct: 114 SETRAEIGDLITQLESKNPTPAPTDALFLLNGKWILAYTSF 154
>sp|O81439|PAP1_ARATH Probable plastid-lipid-associated protein 1, chloroplastic
OS=Arabidopsis thaliana GN=PAP1 PE=1 SV=1
Length = 318
Score = 127 bits (318), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 104/163 (63%), Gaps = 15/163 (9%)
Query: 1 MASISQTNQFPCKTLSQNPPHNQFTSK-PSILPLNSVRISRSLAKKSFLSIQGFTRARPL 59
MA++ QFPCKTL+ + + + SK P +LP+NS+ ++S + G + RP
Sbjct: 1 MATVPLFTQFPCKTLNPSSSNTKHQSKSPILLPINSIN------RRSEI---GVSVHRPD 51
Query: 60 VLTRAAD-DDEWGP---EKEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLN 115
RA D DDEWG E+ ++VA++ + + V E + LK++L DS YGTDRGL+
Sbjct: 52 FKIRATDIDDEWGQDGVERVFASSSTVSVADK-AIESVEETERLKRSLADSLYGTDRGLS 110
Query: 116 ATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVHIFF 158
+S+TRAEI ELITQLE+KNPTPAP EAL LLN KWIL + F
Sbjct: 111 VSSDTRAEISELITQLESKNPTPAPNEALFLLNGKWILAYTSF 153
>sp|O49629|PAP2_ARATH Probable plastid-lipid-associated protein 2, chloroplastic
OS=Arabidopsis thaliana GN=PAP2 PE=1 SV=1
Length = 310
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/159 (45%), Positives = 99/159 (62%), Gaps = 15/159 (9%)
Query: 1 MASISQTNQFPCKTLSQNPPHNQFTSKPSIL-PLNSVRISRSLAKKSFLSIQGFTRARPL 59
MA++ + QF C+T P+++ SKP L P+ S+ I R + +++ R +
Sbjct: 1 MATVQLSTQFSCQTRVSISPNSKSISKPPFLVPVTSI-IHRPMISTGGIAVS----PRRV 55
Query: 60 VLTRAADDDEWGPEKEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNATSE 119
RA D E G + +A EE+ ++V E + LK++LVDS YGTDRGL+A+SE
Sbjct: 56 FKVRATDTGEIG---------SALLAAEEAIEDVEETERLKRSLVDSLYGTDRGLSASSE 106
Query: 120 TRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVHIFF 158
TRAEI +LITQLE+KNPTPAPTEAL LLN KWIL + F
Sbjct: 107 TRAEIGDLITQLESKNPTPAPTEALFLLNGKWILAYTSF 145
>sp|Q94FZ9|PAP1_BRACM Plastid lipid-associated protein 1, chloroplastic OS=Brassica
campestris GN=PAP1 PE=1 SV=1
Length = 327
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 94/163 (57%), Gaps = 21/163 (12%)
Query: 8 NQFPCKT-LSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRAR-------PL 59
+QF CKT ++ + + + P +LP+N + ++ + F RA P
Sbjct: 9 SQFTCKTPITSSSTSSFQSKSPILLPINPINRRIAVHRHDFK-----VRASDVNDEWGPD 63
Query: 60 VLTRAAD-DDEWGPEKEKEEGGALAVAEE---ESPKEVTEIDNLKKALVDSFYGTDRGLN 115
R D DDEWGPE G +VAE+ E+ + E + LK+ L S YGTDRGL+
Sbjct: 64 SKGRGGDVDDEWGPEI----GLNSSVAEKVAEEAIESAEETERLKRVLAGSLYGTDRGLS 119
Query: 116 ATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVHIFF 158
A+SETRAEI ELITQLE+KNP PAP EAL LLN KWILV+ F
Sbjct: 120 ASSETRAEISELITQLESKNPNPAPNEALFLLNGKWILVYTSF 162
>sp|Q6K439|PAP2_ORYSJ Probable plastid-lipid-associated protein 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=PAP2 PE=2 SV=1
Length = 319
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 84/145 (57%), Gaps = 15/145 (10%)
Query: 25 TSKPSILPLNSVRISRSLAKKSFLSIQGF-----TRARPLVLTRAA----DDDEWGPEKE 75
T PS P+ S R L + L G RA P LT A +DEWG E
Sbjct: 14 TQSPSPSPVASAR----LVAPAVLGFAGAPRFPTLRAAPRRLTARAVAGDAEDEWGKEPA 69
Query: 76 KEEGGALAVAEEESPKE--VTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEA 133
++GGA A E +E+ LK L ++ YGT+RGL A+SETRAE+VELITQLEA
Sbjct: 70 ADQGGAAAAVAEAPADVPVTSEVAELKAKLKEALYGTERGLRASSETRAEVVELITQLEA 129
Query: 134 KNPTPAPTEALTLLNAKWILVHIFF 158
+NPTPAPTEALTLLN KWIL + F
Sbjct: 130 RNPTPAPTEALTLLNGKWILAYTSF 154
>sp|O82291|PAP3_ARATH Probable plastid-lipid-associated protein 3, chloroplastic
OS=Arabidopsis thaliana GN=PAP3 PE=1 SV=1
Length = 376
Score = 76.6 bits (187), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 56/97 (57%), Gaps = 12/97 (12%)
Query: 66 DDDEWGPE----KEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNATSETR 121
++DEWG E E + G AV++ LK+ L DS YGT+ G A SE R
Sbjct: 124 NEDEWGGEIGGETEADAGNGSAVSDPTW--------ELKRCLADSVYGTELGFKAGSEVR 175
Query: 122 AEIVELITQLEAKNPTPAPTEALTLLNAKWILVHIFF 158
AE++EL+ QLEA NPTPAP E LL+ W+L++ F
Sbjct: 176 AEVLELVNQLEALNPTPAPLENPELLDGNWVLLYTAF 212
>sp|Q7XBW5|PAP3_ORYSJ Probable plastid-lipid-associated protein 3, chloroplastic OS=Oryza
sativa subsp. japonica GN=PAP3 PE=3 SV=1
Length = 374
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 57/101 (56%), Gaps = 7/101 (6%)
Query: 62 TRAAD----DDEWGPEKEKEEGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNAT 117
T AAD DDEWG + E+ E + LK+ LVD+ YG+D G A+
Sbjct: 111 TSAADPPTNDDEWGGDPAPPPPPPPVPEED---NEEERREELKRCLVDTVYGSDLGFRAS 167
Query: 118 SETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVHIFF 158
SE R E++EL+TQLEA NPTP P +A LL WIL++ +
Sbjct: 168 SEVRGEVLELVTQLEATNPTPEPVQATHLLAGNWILIYTAY 208
>sp|Q9ZP40|PG1_PEA Plastoglobulin-1, chloroplastic OS=Pisum sativum GN=PG1 PE=1 SV=1
Length = 358
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 43/60 (71%)
Query: 96 IDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVH 155
++ LK++LVD+ YGT+ G A SE RAE+ E + QLEA NPTPAP E LLN W+L++
Sbjct: 132 LEGLKRSLVDTVYGTELGFRARSEVRAEVSEFVAQLEAANPTPAPVEEPDLLNGNWVLLY 191
>sp|Q94KU5|PAP3_BRACM Plastid lipid-associated protein 3, chloroplastic OS=Brassica
campestris GN=PAP3 PE=2 SV=1
Length = 360
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 58/108 (53%), Gaps = 13/108 (12%)
Query: 64 AADDDEWGPEKEK-EEGGALAVAEEESPK-----EVTEIDN-------LKKALVDSFYGT 110
+A DEWG + E E AE + P E E D+ LK+ L D+ YGT
Sbjct: 89 SAVSDEWGEKSESVPEESVTRFAESDPPTNEDEWEEREADDGVDKTWELKRCLADTVYGT 148
Query: 111 DRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVHIFF 158
+ G A SE RAE++E++ QLEA NPT AP E LL+ W+L++ F
Sbjct: 149 ELGFRAGSEVRAEVLEIVNQLEALNPTQAPVENPELLDGNWVLLYTAF 196
>sp|Q5M755|PAP7_ARATH Probable plastid-lipid-associated protein 7, chloroplastic
OS=Arabidopsis thaliana GN=PAP7 PE=2 SV=1
Length = 273
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 96 IDNLKKALVDSFYGTDRGL-NATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILV 154
+ ++K+ L ++ G +RG+ S+ + EI L+ LE +NPTP PT L + W L+
Sbjct: 83 VSHIKEELYEALKGINRGIFGVKSDKKTEIEGLVKLLECRNPTPEPTGELDKIGGCWKLI 142
Query: 155 H 155
+
Sbjct: 143 Y 143
>sp|Q9LU85|PAP4_ARATH Probable plastid-lipid-associated protein 4, chloroplastic
OS=Arabidopsis thaliana GN=PAP4 PE=1 SV=1
Length = 242
Score = 36.2 bits (82), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 98 NLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVH 155
LK+ L+++ +RG A+ + + I +L ++EA NPT P ++ L+N KW L++
Sbjct: 73 QLKQELLEAIEPLERGATASPDDQLRIDQLARKVEAVNPTKEPLKS-DLVNGKWELIY 129
>sp|Q6DBN2|PAP5_ARATH Probable plastid-lipid-associated protein 5, chloroplastic
OS=Arabidopsis thaliana GN=PAP5 PE=2 SV=1
Length = 234
Score = 35.4 bits (80), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 98 NLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVH 155
LK LV++ +RG A+ + + I +L ++EA NPT P ++ L+N KW L++
Sbjct: 64 QLKHELVEAIEPLERGATASPDDQLLIDQLARKVEAVNPTKEPLKS-DLINGKWELIY 120
>sp|Q9SD67|FTSH7_ARATH ATP-dependent zinc metalloprotease FTSH 7, chloroplastic
OS=Arabidopsis thaliana GN=FTSH7 PE=2 SV=1
Length = 802
Score = 31.6 bits (70), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 12 CKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLVLTRAADDDE 69
C+ QNP N+F S LPL +++ + F GF+R + ++ +DD+
Sbjct: 37 CRVYRQNP--NRFVSNSITLPLQKKQVTVLRNHERFNLWDGFSRKKSRLVVNCQEDDQ 92
>sp|Q9ZDR4|ODPA_RICPR Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia
prowazekii (strain Madrid E) GN=pdhA PE=3 SV=1
Length = 326
Score = 30.8 bits (68), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 31/60 (51%)
Query: 86 EEESPKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALT 145
E E KE + +++ ++D+ Y T+ L A ++ EI+++ + +P PA E T
Sbjct: 263 EVEKYKERDTLVRIREIILDNKYATEADLKAIEQSVREIIKVAVEFSENSPLPAEDELYT 322
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.130 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,298,802
Number of Sequences: 539616
Number of extensions: 2583509
Number of successful extensions: 6905
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 6858
Number of HSP's gapped (non-prelim): 48
length of query: 181
length of database: 191,569,459
effective HSP length: 110
effective length of query: 71
effective length of database: 132,211,699
effective search space: 9387030629
effective search space used: 9387030629
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 57 (26.6 bits)