BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030222
(181 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1FB0|A Chain A, Crystal Structure Of Thioredoxin M From Spinach
Chloroplast (Reduced Form)
pdb|1FB0|B Chain B, Crystal Structure Of Thioredoxin M From Spinach
Chloroplast (Reduced Form)
pdb|1FB6|A Chain A, Crystal Structure Of Thioredoxin M From Spinach
Chloroplast (Oxidized Form)
pdb|1FB6|B Chain B, Crystal Structure Of Thioredoxin M From Spinach
Chloroplast (Oxidized Form)
Length = 105
Score = 157 bits (397), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 67/101 (66%), Positives = 88/101 (87%)
Query: 81 VEDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 140
V D++W+ VL+S PV+V+FWAPWCGPC++I P+IDEL+K+Y GK+ YK+NTDE+P I
Sbjct: 5 VNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGI 64
Query: 141 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
AT+Y IRSIPTV+ FKNGE+K+++IGAVPKSTLT SIEK+L
Sbjct: 65 ATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYL 105
>pdb|1GL8|A Chain A, Solution Structure Of Thioredoxin M From Spinach, Oxidized
Form
Length = 104
Score = 157 bits (396), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 67/101 (66%), Positives = 88/101 (87%)
Query: 81 VEDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 140
V D++W+ VL+S PV+V+FWAPWCGPC++I P+IDEL+K+Y GK+ YK+NTDE+P I
Sbjct: 4 VNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGI 63
Query: 141 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
AT+Y IRSIPTV+ FKNGE+K+++IGAVPKSTLT SIEK+L
Sbjct: 64 ATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYL 104
>pdb|2PUK|C Chain C, Crystal Srtucture Of The Binary Complex Between
Ferredoxin: Thioredoxin Reductase And Thioredoxin M
pdb|2PUK|G Chain G, Crystal Srtucture Of The Binary Complex Between
Ferredoxin: Thioredoxin Reductase And Thioredoxin M
Length = 106
Score = 154 bits (390), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 66/101 (65%), Positives = 87/101 (86%)
Query: 81 VEDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 140
V D++W+ VL+S PV+V+FWAPWCGP ++I P+IDEL+K+Y GK+ YK+NTDE+P I
Sbjct: 5 VNDSSWKEFVLESEVPVMVDFWAPWCGPSKLIAPVIDELAKEYSGKIAVYKLNTDEAPGI 64
Query: 141 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
AT+Y IRSIPTV+ FKNGE+K+++IGAVPKSTLT SIEK+L
Sbjct: 65 ATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYL 105
>pdb|1DBY|A Chain A, Nmr Structures Of Chloroplast Thioredoxin M Ch2 From The
Green Alga Chlamydomonas Reinhardtii
Length = 107
Score = 147 bits (371), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 62/102 (60%), Positives = 88/102 (86%)
Query: 80 AVEDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPS 139
AV D T++++VL+S PVLV+FWAPWCGPCR+I P++DE++ +Y KLKC K+NTDESP+
Sbjct: 5 AVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPN 64
Query: 140 IATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
+A+ YGIRSIPT+M+FK G+K +T+IGAVPK+T+ ++EK+L
Sbjct: 65 VASEYGIRSIPTIMVFKGGKKCETIIGAVPKATIVQTVEKYL 106
>pdb|2YJ7|A Chain A, Crystal Structure Of A Hyperstable Protein From The
Precambrian Period
pdb|2YJ7|B Chain B, Crystal Structure Of A Hyperstable Protein From The
Precambrian Period
Length = 106
Score = 119 bits (299), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 76/101 (75%)
Query: 81 VEDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 140
V D ++ VL S PVLV+FWAPWCGPCRMI PII+EL+K+Y GK+K KVN DE+P+
Sbjct: 6 VTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENPNT 65
Query: 141 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
A +YGIRSIPT+++FKNG+ D ++GA PK L I+K L
Sbjct: 66 AAQYGIRSIPTLLLFKNGQVVDRLVGAQPKEALKERIDKHL 106
>pdb|2FCH|A Chain A, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|B Chain B, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|C Chain C, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|D Chain D, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|E Chain E, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|F Chain F, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|G Chain G, Crystal Structure Of Thioredoxin Mutant G74s
Length = 108
Score = 109 bits (272), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 69/99 (69%)
Query: 83 DATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIAT 142
D ++ + VL + +LV+FWA WCGPC+MI PI+DE++ +Y GKL K+N D++P A
Sbjct: 9 DDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP 68
Query: 143 RYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
+YGIRSIPT+++FKNGE T +GA+ K L ++ L
Sbjct: 69 KYGIRSIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 107
>pdb|3DXB|A Chain A, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|B Chain B, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|C Chain C, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|D Chain D, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|E Chain E, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|F Chain F, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|G Chain G, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|H Chain H, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
Length = 222
Score = 108 bits (271), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 68/99 (68%)
Query: 83 DATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIAT 142
D ++ + VL + +LV+FWA WCGPC+MI PI+DE++ +Y GKL K+N D++P A
Sbjct: 19 DDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP 78
Query: 143 RYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
+YGIR IPT+++FKNGE T +GA+ K L ++ L
Sbjct: 79 KYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 117
>pdb|1ZZY|A Chain A, Crystal Structure Of Thioredoxin Mutant L7v
pdb|1ZZY|B Chain B, Crystal Structure Of Thioredoxin Mutant L7v
Length = 108
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 69/101 (68%)
Query: 81 VEDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 140
V D ++ + VL + +LV+FWA WCGPC+MI PI+DE++ +Y GKL K+N D++P
Sbjct: 7 VTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGT 66
Query: 141 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
A +YGIR IPT+++FKNGE T +GA+ K L ++ L
Sbjct: 67 APKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 107
>pdb|2H75|A Chain A, Crystal Structure Of Thioredoxin Mutant D13e In Hexagonal
(P61) Space Group
pdb|2H75|B Chain B, Crystal Structure Of Thioredoxin Mutant D13e In Hexagonal
(P61) Space Group
Length = 108
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 69/99 (69%)
Query: 83 DATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIAT 142
D ++++ VL + +LV+FWA WCGPC+MI PI+DE++ +Y GKL K+N D++P A
Sbjct: 9 DDSFETDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP 68
Query: 143 RYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
+YGIR IPT+++FKNGE T +GA+ K L ++ L
Sbjct: 69 KYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 107
>pdb|2H71|A Chain A, Crystal Structure Of Thioredoxin Mutant D47e In Hexagonal
(P61) Space Group
pdb|2H71|B Chain B, Crystal Structure Of Thioredoxin Mutant D47e In Hexagonal
(P61) Space Group
Length = 108
Score = 108 bits (269), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 69/99 (69%)
Query: 83 DATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIAT 142
D ++ + VL + +LV+FWA WCGPC+MI PI+DE++++Y GKL K+N D++P A
Sbjct: 9 DDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIAEEYQGKLTVAKLNIDQNPGTAP 68
Query: 143 RYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
+YGIR IPT+++FKNGE T +GA+ K L ++ L
Sbjct: 69 KYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 107
>pdb|2H76|A Chain A, Crystal Structure Of Thioredoxin Mutant D10e In Hexagonal
(P61) Space Group
pdb|2H76|B Chain B, Crystal Structure Of Thioredoxin Mutant D10e In Hexagonal
(P61) Space Group
Length = 108
Score = 107 bits (268), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 68/99 (68%)
Query: 83 DATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIAT 142
D ++ + VL + +LV+FWA WCGPC+MI PI+DE++ +Y GKL K+N D++P A
Sbjct: 9 DESFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP 68
Query: 143 RYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
+YGIR IPT+++FKNGE T +GA+ K L ++ L
Sbjct: 69 KYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 107
>pdb|2H74|A Chain A, Crystal Structure Of Thioredoxin Mutant D2e In Hexagonal
(P61) Space Group
pdb|2H74|B Chain B, Crystal Structure Of Thioredoxin Mutant D2e In Hexagonal
(P61) Space Group
Length = 108
Score = 107 bits (268), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 68/99 (68%)
Query: 83 DATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIAT 142
D ++ + VL + +LV+FWA WCGPC+MI PI+DE++ +Y GKL K+N D++P A
Sbjct: 9 DDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP 68
Query: 143 RYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
+YGIR IPT+++FKNGE T +GA+ K L ++ L
Sbjct: 69 KYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 107
>pdb|1XOB|A Chain A, Thioredoxin (Reduced Dithio Form), Nmr, 20 Structures
pdb|1XOA|A Chain A, Thioredoxin (Oxidized Disulfide Form), Nmr, 20 Structures
Length = 108
Score = 107 bits (268), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 68/99 (68%)
Query: 83 DATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIAT 142
D ++ + VL + +LV+FWA WCGPC+MI PI+DE++ +Y GKL K+N D++P A
Sbjct: 9 DDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP 68
Query: 143 RYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
+YGIR IPT+++FKNGE T +GA+ K L ++ L
Sbjct: 69 KYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 107
>pdb|2TRX|A Chain A, Crystal Structure Of Thioredoxin From Escherichia Coli At
1.68 Angstroms Resolution
pdb|2TRX|B Chain B, Crystal Structure Of Thioredoxin From Escherichia Coli At
1.68 Angstroms Resolution
pdb|1T7P|B Chain B, T7 Dna Polymerase Complexed To Dna PrimerTEMPLATE,A
Nucleoside Triphosphate, And Its Processivity Factor
Thioredoxin
pdb|1SKR|B Chain B, T7 Dna Polymerase Complexed To Dna Primer/template And
Ddatp
pdb|1SKS|B Chain B, Binary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A CIS-Syn Thymine Dimer On The
Template
pdb|1SKW|B Chain B, Binary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A DISORDERED CIS-Syn Thymine
Dimer On The Template
pdb|1SL0|B Chain B, Ternary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A DISORDERED CIS-Syn Thymine
Dimer On The Template And An Incoming Nucleotide
pdb|1SL0|D Chain D, Ternary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A DISORDERED CIS-Syn Thymine
Dimer On The Template And An Incoming Nucleotide
pdb|1SL1|B Chain B, Binary 5' Complex Of T7 Dna Polymerase With A Dna
Primer/template Containing A Cis-syn Thymine Dimer On
The Template
pdb|1SL2|B Chain B, Ternary 5' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A CIS-Syn Thymine Dimer On The
Template And An Incoming Nucleotide
pdb|1TK0|B Chain B, T7 Dna Polymerase Ternary Complex With 8 Oxo Guanosine And
Ddctp At The Insertion Site
pdb|1TK5|B Chain B, T7 Dna Polymerase Binary Complex With 8 Oxo Guanosine In
The Templating Strand
pdb|1TK8|B Chain B, T7 Dna Polymerase Ternary Complex With 8 Oxo Guanosine And
Damp At The Elongation Site
pdb|1TKD|B Chain B, T7 Dna Polymerase Ternary Complex With 8 Oxo Guanosine And
Dcmp At The Elongation Site
pdb|1T8E|B Chain B, T7 Dna Polymerase Ternary Complex With Dctp At The
Insertion Site.
pdb|1X9M|B Chain B, T7 Dna Polymerase In Complex With An N-2-
Acetylaminofluorene-adducted Dna
pdb|1X9S|B Chain B, T7 Dna Polymerase In Complex With A PrimerTEMPLATE DNA
Containing A Disordered N-2 Aminofluorene On The
Template, Crystallized With Dideoxy-Ctp As The Incoming
Nucleotide.
pdb|1X9W|B Chain B, T7 Dna Polymerase In Complex With A Primer/template Dna
Containing A Disordered N-2 Aminofluorene On The
Template, Crystallized With Dideoxy-atp As The Incoming
Nucleotide.
pdb|2BTO|T Chain T, Structure Of Btuba From Prosthecobacter Dejongeii
pdb|1ZYQ|B Chain B, T7 Dna Polymerase In Complex With 8og And Incoming Ddatp
pdb|2AJQ|B Chain B, Structure Of Replicative Dna Polymerase Provides Insigts
Into The Mechanisms For Processivity, Frameshifting And
Editing
pdb|2AJQ|I Chain I, Structure Of Replicative Dna Polymerase Provides Insigts
Into The Mechanisms For Processivity, Frameshifting And
Editing
pdb|2H6X|A Chain A, Crystal Structure Of Thioredoxin Wild Type In Hexagonal
(P61) Space Group
pdb|2H6X|B Chain B, Crystal Structure Of Thioredoxin Wild Type In Hexagonal
(P61) Space Group
Length = 108
Score = 107 bits (268), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 68/99 (68%)
Query: 83 DATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIAT 142
D ++ + VL + +LV+FWA WCGPC+MI PI+DE++ +Y GKL K+N D++P A
Sbjct: 9 DDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP 68
Query: 143 RYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
+YGIR IPT+++FKNGE T +GA+ K L ++ L
Sbjct: 69 KYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 107
>pdb|2EIO|A Chain A, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIO|B Chain B, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIO|C Chain C, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIO|D Chain D, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
Length = 108
Score = 107 bits (267), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 69/101 (68%)
Query: 81 VEDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 140
+ D ++ + VL + +LV+FWA WCGPC+MI PI+DE++ +Y GKL K+N D++P
Sbjct: 7 LTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGT 66
Query: 141 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
A +YGIR IPT+++FKNGE T +GA+ K L ++ L
Sbjct: 67 APKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKCFLDANL 107
>pdb|2H6Y|A Chain A, Crystal Structure Of Thioredoxin Mutant E48d In Hexagonal
(P61) Space Group
pdb|2H6Y|B Chain B, Crystal Structure Of Thioredoxin Mutant E48d In Hexagonal
(P61) Space Group
Length = 108
Score = 107 bits (266), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 68/101 (67%)
Query: 81 VEDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 140
+ D ++ + VL + +LV+FWA WCGPC+MI PI+DE++ Y GKL K+N D++P
Sbjct: 7 LTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADDYQGKLTVAKLNIDQNPGT 66
Query: 141 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
A +YGIR IPT+++FKNGE T +GA+ K L ++ L
Sbjct: 67 APKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 107
>pdb|2TIR|A Chain A, Crystal Structure Analysis Of A Mutant Escherichia Coli
Thioredoxin In Which Lysine 36 Is Replaced By Glutamic
Acid
Length = 108
Score = 107 bits (266), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 67/99 (67%)
Query: 83 DATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIAT 142
D ++ + VL + +LV+FWA WCGPC MI PI+DE++ +Y GKL K+N D++P A
Sbjct: 9 DDSFDTDVLKADGAILVDFWAEWCGPCEMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP 68
Query: 143 RYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
+YGIR IPT+++FKNGE T +GA+ K L ++ L
Sbjct: 69 KYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 107
>pdb|2H6Z|A Chain A, Crystal Structure Of Thioredoxin Mutant E44d In Hexagonal
(P61) Space Group
pdb|2H6Z|B Chain B, Crystal Structure Of Thioredoxin Mutant E44d In Hexagonal
(P61) Space Group
Length = 108
Score = 106 bits (265), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 69/101 (68%)
Query: 81 VEDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 140
+ D ++ + VL + +LV+FWA WCGPC+MI PI+D+++ +Y GKL K+N D++P
Sbjct: 7 LTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDDIADEYQGKLTVAKLNIDQNPGT 66
Query: 141 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
A +YGIR IPT+++FKNGE T +GA+ K L ++ L
Sbjct: 67 APKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 107
>pdb|2H72|A Chain A, Crystal Structure Of Thioredoxin Mutant E85d In Hexagonal
(P61) Space Group
pdb|2H72|B Chain B, Crystal Structure Of Thioredoxin Mutant E85d In Hexagonal
(P61) Space Group
Length = 108
Score = 106 bits (265), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 69/101 (68%)
Query: 81 VEDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 140
+ D ++ + VL + +LV+FWA WCGPC+MI PI+DE++ +Y GKL K+N D++P
Sbjct: 7 LTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGT 66
Query: 141 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
A +YGIR IPT+++FKNG+ T +GA+ K L ++ L
Sbjct: 67 APKYGIRGIPTLLLFKNGDVAATKVGALSKGQLKEFLDANL 107
>pdb|2EIR|A Chain A, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIR|B Chain B, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIR|C Chain C, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIR|D Chain D, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
Length = 108
Score = 106 bits (265), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 66/93 (70%)
Query: 81 VEDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 140
+ D ++ + VL + +LV+FWA WCGPC+MI PI+DE++ +Y GKL K+N D++P
Sbjct: 7 LTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGT 66
Query: 141 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTL 173
A +YGIR IPT+++FKNGE T +GA+ K L
Sbjct: 67 APKYGIRGIPTLLLFKNGEVAATKVGALSKGQL 99
>pdb|3DYR|A Chain A, Crystal Structure Of E. Coli Thioredoxin Mutant I76t In
Its Oxidized Form
pdb|3DYR|B Chain B, Crystal Structure Of E. Coli Thioredoxin Mutant I76t In
Its Oxidized Form
Length = 111
Score = 106 bits (264), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 67/99 (67%)
Query: 83 DATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIAT 142
D ++ + VL + +LV+FWA WCGPC+MI PI+DE++ +Y GKL K+N D++P A
Sbjct: 10 DDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP 69
Query: 143 RYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
+YGIR PT+++FKNGE T +GA+ K L ++ L
Sbjct: 70 KYGIRGTPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 108
>pdb|2H70|A Chain A, Crystal Structure Of Thioredoxin Mutant D9e In Hexagonal
(P61) Space Group
pdb|2H70|B Chain B, Crystal Structure Of Thioredoxin Mutant D9e In Hexagonal
(P61) Space Group
Length = 108
Score = 106 bits (264), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 67/97 (69%)
Query: 85 TWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRY 144
++ + VL + +LV+FWA WCGPC+MI PI+DE++ +Y GKL K+N D++P A +Y
Sbjct: 11 SFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKY 70
Query: 145 GIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
GIR IPT+++FKNGE T +GA+ K L ++ L
Sbjct: 71 GIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 107
>pdb|2H73|A Chain A, Crystal Structure Of Thioredoxin Mutant D43e In Hexagonal
(P61) Space Group
pdb|2H73|B Chain B, Crystal Structure Of Thioredoxin Mutant D43e In Hexagonal
(P61) Space Group
Length = 108
Score = 105 bits (263), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 68/99 (68%)
Query: 83 DATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIAT 142
D ++ + VL + +LV+FWA WCGPC+MI PI++E++ +Y GKL K+N D++P A
Sbjct: 9 DDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILEEIADEYQGKLTVAKLNIDQNPGTAP 68
Query: 143 RYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
+YGIR IPT+++FKNGE T +GA+ K L ++ L
Sbjct: 69 KYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 107
>pdb|2EIQ|A Chain A, Design Of Disulfide-linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIQ|B Chain B, Design Of Disulfide-linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
Length = 108
Score = 105 bits (261), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 67/99 (67%)
Query: 83 DATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIAT 142
D ++ + VL + +LV+FWA WCGPC+MI PI+DE++ +Y GKL K+N D++P A
Sbjct: 9 DDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP 68
Query: 143 RYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
+YGIR IPT+++FKNGE +GA+ K L ++ L
Sbjct: 69 KYGIRGIPTLLLFKNGEVAACKVGALSKGQLKEFLDANL 107
>pdb|2FD3|A Chain A, Crystal Structure Of Thioredoxin Mutant P34h
pdb|2FD3|B Chain B, Crystal Structure Of Thioredoxin Mutant P34h
Length = 108
Score = 104 bits (260), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 67/99 (67%)
Query: 83 DATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIAT 142
D ++ + VL + +LV+FWA WCG C+MI PI+DE++ +Y GKL K+N D++P A
Sbjct: 9 DDSFDTDVLKADGAILVDFWAEWCGHCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP 68
Query: 143 RYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
+YGIR IPT+++FKNGE T +GA+ K L ++ L
Sbjct: 69 KYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 107
>pdb|2O8V|B Chain B, Paps Reductase In A Covalent Complex With Thioredoxin C35a
Length = 128
Score = 104 bits (260), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 67/99 (67%)
Query: 83 DATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIAT 142
D ++ + VL + +LV+FWA WCGP +MI PI+DE++ +Y GKL K+N D++P A
Sbjct: 29 DDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP 88
Query: 143 RYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
+YGIR IPT+++FKNGE T +GA+ K L ++ L
Sbjct: 89 KYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 127
>pdb|1F6M|C Chain C, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|D Chain D, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|G Chain G, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|H Chain H, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
Length = 108
Score = 104 bits (259), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 67/99 (67%)
Query: 83 DATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIAT 142
D ++ + VL + +LV+FWA WCGP +MI PI+DE++ +Y GKL K+N D++P A
Sbjct: 9 DDSFDTDVLKADGAILVDFWAEWCGPSKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP 68
Query: 143 RYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
+YGIR IPT+++FKNGE T +GA+ K L ++ L
Sbjct: 69 KYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 107
>pdb|1KEB|A Chain A, Crystal Structure Of Double Mutant M37l,P40s E.Coli
Thioredoxin
pdb|1KEB|B Chain B, Crystal Structure Of Double Mutant M37l,P40s E.Coli
Thioredoxin
Length = 108
Score = 103 bits (257), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 67/99 (67%)
Query: 83 DATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIAT 142
D ++ + VL + +LV+FWA WCGPC++I I+DE++ +Y GKL K+N D++P A
Sbjct: 9 DDSFDTDVLKADGAILVDFWAEWCGPCKLIASILDEIADEYQGKLTVAKLNIDQNPGTAP 68
Query: 143 RYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
+YGIR IPT+++FKNGE T +GA+ K L ++ L
Sbjct: 69 KYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 107
>pdb|1T00|A Chain A, The Structure Of Thioredoxin From S. Coelicolor
Length = 112
Score = 103 bits (257), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 68/101 (67%)
Query: 81 VEDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 140
V D +++ VL + PVLV+FWA WCGPCR I P ++ ++ +Y K++ K+N DE+P
Sbjct: 10 VTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGT 69
Query: 141 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
A +YG+ SIPT+ +++ GE T++GA PK+ + +E F+
Sbjct: 70 AAKYGVMSIPTLNVYQGGEVAKTIVGAKPKAAIVRDLEDFI 110
>pdb|1THO|A Chain A, Crystal Structure Of A Mutant Escherichia Coli Thioredoxin
With An Arginine Insertion In The Active Site
Length = 109
Score = 103 bits (256), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 68/100 (68%), Gaps = 1/100 (1%)
Query: 83 DATWQSLVLDSGSPVLVEFWAPWCG-PCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIA 141
D ++ + VL + +LV+FWA WCG PC+MI PI+DE++ +Y GKL K+N D++P A
Sbjct: 9 DDSFDTDVLKADGAILVDFWAEWCGRPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTA 68
Query: 142 TRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
+YGIR IPT+++FKNGE T +GA+ K L ++ L
Sbjct: 69 PKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 108
>pdb|1V98|A Chain A, Crystal Structure Analysis Of Thioredoxin From Thermus
Thermophilus
pdb|1V98|B Chain B, Crystal Structure Analysis Of Thioredoxin From Thermus
Thermophilus
Length = 140
Score = 102 bits (255), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
Query: 93 SGSPV-LVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPT 151
+G+P+ LV+F+APWCGPCR++ PI++EL++ + G+LK KVN DE P +A RYG+RS+PT
Sbjct: 48 AGAPLTLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDEHPGLAARYGVRSVPT 107
Query: 152 VMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
+++F+ G T +GA P+ L + +L
Sbjct: 108 LVLFRRGAPVATWVGASPRRVLEERLRPYL 137
>pdb|2I4A|A Chain A, Crystal Structure Of Thioredoxin From The Acidophile
Acetobacter Aceti
Length = 107
Score = 100 bits (249), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 66/99 (66%)
Query: 80 AVEDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPS 139
AV D+++ VL + VLV+FWA WCGPC+MI P + E+ K++ GK+ KVN D++P
Sbjct: 6 AVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPE 65
Query: 140 IATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIE 178
Y +RSIPT+M+ ++G+ D +GA+PKS L +E
Sbjct: 66 TPNAYQVRSIPTLMLVRDGKVIDKKVGALPKSQLKAWVE 104
>pdb|2CVK|A Chain A, Crystal Structure Of Thermus Thermophilus Thioredoxin
Length = 110
Score = 99.8 bits (247), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 60/85 (70%)
Query: 97 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFK 156
VLV+FWA WC PCR I PI++E++K+Y GKL K++ DE+P A RY + SIPTV++FK
Sbjct: 22 VLVDFWAEWCAPCRXIAPILEEIAKEYEGKLLVAKLDVDENPKTAXRYRVXSIPTVILFK 81
Query: 157 NGEKKDTVIGAVPKSTLTTSIEKFL 181
+G+ + ++GA PK IEK L
Sbjct: 82 DGQPVEVLVGAQPKRNYQAKIEKHL 106
>pdb|2YZU|A Chain A, Crystal Structure Of Oxidized Thioredoxin From Thermus
Thermophilus Hb8
Length = 109
Score = 99.8 bits (247), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 60/85 (70%)
Query: 97 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFK 156
VLV+FWA WC PCR I PI++E++K+Y GKL K++ DE+P A RY + SIPTV++FK
Sbjct: 21 VLVDFWAEWCAPCRXIAPILEEIAKEYEGKLLVAKLDVDENPKTAXRYRVXSIPTVILFK 80
Query: 157 NGEKKDTVIGAVPKSTLTTSIEKFL 181
+G+ + ++GA PK IEK L
Sbjct: 81 DGQPVEVLVGAQPKRNYQAKIEKHL 105
>pdb|1TXX|A Chain A, Active-Site Variant Of E.Coli Thioredoxin
Length = 108
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 66/99 (66%)
Query: 83 DATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIAT 142
D ++ + VL + +LV+FWA WC C+MI PI+DE++ +Y GKL K+N D++P A
Sbjct: 9 DDSFDTDVLKADGAILVDFWAEWCVWCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP 68
Query: 143 RYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
+YGIR IPT+++FKNGE T +GA+ K L ++ L
Sbjct: 69 KYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 107
>pdb|2O7K|A Chain A, S. Aureus Thioredoxin
Length = 107
Score = 99.0 bits (245), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 68/101 (67%), Gaps = 2/101 (1%)
Query: 81 VEDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 140
V DA + S V +SG LV+FWA WCGPC+MI P+++EL+ Y GK K++ DE+PS
Sbjct: 9 VTDADFDSKV-ESGVQ-LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPST 66
Query: 141 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
A +Y + SIPT+++FK+G+ D V+G PK L ++K L
Sbjct: 67 AAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 107
>pdb|1SRX|A Chain A, Three-Dimensional Structure Of Escherichia Coli
Thioredoxin-S2 To 2.8 Angstroms Resolution
Length = 108
Score = 98.2 bits (243), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 66/99 (66%)
Query: 83 DATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIAT 142
D ++ + ++ + +LV+FWA WCGPC+MI PI+DE++ +Y GKL K+N D++P A
Sbjct: 9 DDSFDTDLVKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP 68
Query: 143 RYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
+Y R IPT+++FKNGE T +GA+ K L ++ L
Sbjct: 69 KYIERGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 107
>pdb|1ZCP|A Chain A, Crystal Structure Of A Catalytic Site Mutant E. Coli Trxa
(Caca)
pdb|1ZCP|B Chain B, Crystal Structure Of A Catalytic Site Mutant E. Coli Trxa
(Caca)
pdb|1ZCP|C Chain C, Crystal Structure Of A Catalytic Site Mutant E. Coli Trxa
(Caca)
pdb|1ZCP|D Chain D, Crystal Structure Of A Catalytic Site Mutant E. Coli Trxa
(Caca)
Length = 108
Score = 98.2 bits (243), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 65/99 (65%)
Query: 83 DATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIAT 142
D ++ + VL + +LV+FWA WC +MI PI+DE++ +Y GKL K+N D++P A
Sbjct: 9 DDSFDTDVLKADGAILVDFWAEWCACAKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAP 68
Query: 143 RYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
+YGIR IPT+++FKNGE T +GA+ K L ++ L
Sbjct: 69 KYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 107
>pdb|1OAZ|A Chain A, Ige Fv Spe7 Complexed With A Recombinant Thioredoxin
pdb|1OAZ|B Chain B, Ige Fv Spe7 Complexed With A Recombinant Thioredoxin
Length = 123
Score = 98.2 bits (243), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 68/113 (60%), Gaps = 14/113 (12%)
Query: 83 DATWQSLVLDSGSPVLVEFWAPWCGP--------------CRMIHPIIDELSKQYVGKLK 128
D ++ + VL + +LV+FWA WCGP C+MI PI+DE++ +Y GKL
Sbjct: 10 DDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLT 69
Query: 129 CYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
K+N D++P A +YGIR IPT+++FKNGE T +GA+ K L ++ L
Sbjct: 70 VAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 122
>pdb|1RQM|A Chain A, Solution Structure Of The K18gR82E ALICYCLOBACILLUS
Acidocaldarius Thioredoxin Mutant
Length = 105
Score = 97.8 bits (242), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
Query: 83 DATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIAT 142
DA +Q + G PVLV+FWA WCGPCRM+ P+++E ++ + K+ K+N DE+P +
Sbjct: 7 DANFQQAIQGDG-PVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTS 65
Query: 143 RYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
++GI SIPT+++FK GE +IG PK L + L
Sbjct: 66 QFGIMSIPTLILFKGGEPVKQLIGYQPKEQLEAQLADVL 104
>pdb|1NW2|A Chain A, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|B Chain B, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|C Chain C, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|D Chain D, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|E Chain E, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|F Chain F, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|G Chain G, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|H Chain H, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
Length = 105
Score = 96.3 bits (238), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 83 DATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIAT 142
DA +Q + PVLV+FWA WCGPCRM+ P+++E ++ + K+ K+N DE+P +
Sbjct: 7 DANFQQ-AIQGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTS 65
Query: 143 RYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
++GI SIPT+++FK GE +IG PK L + L
Sbjct: 66 QFGIMSIPTLILFKGGEPVKQLIGYQPKEQLEAQLADVL 104
>pdb|2O87|A Chain A, S. Aureus Thioredoxin P31s Mutant
Length = 106
Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 67/101 (66%), Gaps = 2/101 (1%)
Query: 81 VEDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 140
V DA + S V +SG LV+FWA WCG C+MI P+++EL+ Y GK K++ DE+PS
Sbjct: 8 VTDADFDSKV-ESGVQ-LVDFWATWCGSCKMIAPVLEELAADYEGKADILKLDVDENPST 65
Query: 141 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
A +Y + SIPT+++FK+G+ D V+G PK L ++K L
Sbjct: 66 AAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 106
>pdb|2O85|A Chain A, S. Aureus Thioredoxin P31t Mutant
Length = 107
Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 67/101 (66%), Gaps = 2/101 (1%)
Query: 81 VEDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 140
V DA + S V +SG LV+FWA WCG C+MI P+++EL+ Y GK K++ DE+PS
Sbjct: 9 VTDADFDSKV-ESGVQ-LVDFWATWCGTCKMIAPVLEELAADYEGKADILKLDVDENPST 66
Query: 141 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
A +Y + SIPT+++FK+G+ D V+G PK L ++K L
Sbjct: 67 AAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 107
>pdb|2GZY|A Chain A, Solution Structures Of The Reduced Form Of Thioredoxin
From Bacillus Subtilis
pdb|2GZZ|A Chain A, Solution Structures Of The Oxidized Form Of Thioredoxin
From Bacillus Subtilis
Length = 104
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 66/103 (64%), Gaps = 1/103 (0%)
Query: 80 AVEDATWQSLVLD-SGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESP 138
A+ AT QS + S VL +FWAPWCGPC+MI P+++EL ++ KLK K++ DE+
Sbjct: 2 AIVKATDQSFSAETSEGVVLADFWAPWCGPCKMIAPVLEELDQEMGDKLKIVKIDVDENQ 61
Query: 139 SIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
A +YG+ SIPT+++ K+GE +T +G PK L + K L
Sbjct: 62 ETAGKYGVMSIPTLLVLKDGEVVETSVGFKPKEALQELVNKHL 104
>pdb|1NSW|A Chain A, The Crystal Structure Of The K18g Mutant Of The
Thioredoxin From Alicyclobacillus Acidocaldarius
pdb|1NSW|B Chain B, The Crystal Structure Of The K18g Mutant Of The
Thioredoxin From Alicyclobacillus Acidocaldarius
pdb|1NSW|C Chain C, The Crystal Structure Of The K18g Mutant Of The
Thioredoxin From Alicyclobacillus Acidocaldarius
pdb|1NSW|D Chain D, The Crystal Structure Of The K18g Mutant Of The
Thioredoxin From Alicyclobacillus Acidocaldarius
Length = 105
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 83 DATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIAT 142
DA +Q + G PVLV+FWA WCGPCRM+ P+++E ++ + K+ K+N DE+P +
Sbjct: 7 DANFQQAIQGDG-PVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTS 65
Query: 143 RYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
++GI SIPT+++FK G +IG PK L + L
Sbjct: 66 QFGIMSIPTLILFKGGRPVKQLIGYQPKEQLEAQLADVL 104
>pdb|3P2A|A Chain A, Crystal Structure Of Thioredoxin 2 From Yersinia Pestis
pdb|3P2A|B Chain B, Crystal Structure Of Thioredoxin 2 From Yersinia Pestis
pdb|3P2A|C Chain C, Crystal Structure Of Thioredoxin 2 From Yersinia Pestis
pdb|3P2A|D Chain D, Crystal Structure Of Thioredoxin 2 From Yersinia Pestis
Length = 148
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 69/103 (66%), Gaps = 2/103 (1%)
Query: 81 VEDATWQSL--VLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESP 138
V +AT ++L +L P +++FWAPWCGPCR PI E + + GK++ KVNT+ P
Sbjct: 40 VINATAETLDKLLQDDLPXVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEP 99
Query: 139 SIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
+++TR+ IRSIPT+ +++NG+ D + GAVPK+ +++ L
Sbjct: 100 ALSTRFRIRSIPTIXLYRNGKXIDXLNGAVPKAPFDNWLDEQL 142
>pdb|3DIE|A Chain A, Domain Swapping Of Staphylococcus Aureus Thioredoxin W28a
Mutant
pdb|3DIE|B Chain B, Domain Swapping Of Staphylococcus Aureus Thioredoxin W28a
Mutant
Length = 106
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 67/101 (66%), Gaps = 2/101 (1%)
Query: 81 VEDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 140
V DA + S V +SG LV+FWA CGPC+MI P+++EL+ Y GK K++ DE+PS
Sbjct: 8 VTDADFDSKV-ESGVQ-LVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPST 65
Query: 141 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
A +Y + SIPT+++FK+G+ D V+G PK L ++K L
Sbjct: 66 AAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 106
>pdb|1QUW|A Chain A, Solution Structure Of The Thioredoxin From Bacillus
Acidocaldarius
Length = 105
Score = 94.0 bits (232), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 83 DATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIAT 142
DA +Q + PVLV+FWA WCGPCRM+ P+++E ++ + K+ K+N DE+P +
Sbjct: 7 DANFQQ-AIQGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTS 65
Query: 143 RYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
++GI SIPT+++FK G +IG PK L + L
Sbjct: 66 QFGIMSIPTLILFKGGRPVKQLIGYQPKEQLEAQLADVL 104
>pdb|2E0Q|A Chain A, Crystal Structure Of K53e Thioredoxin From Sulfolobus
Tokodaii Strain7
Length = 104
Score = 93.2 bits (230), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
Query: 91 LDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIP 150
L S +V+FWA WC PC ++ PII+EL++ Y ++ K+N+DE+P IA RYG+ S+P
Sbjct: 13 LASHEIAVVDFWAEWCAPCLILAPIIEELAEDY-PQVGFGKLNSDENPDIAARYGVMSLP 71
Query: 151 TVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
TV+ FK+GE D +IGAVP+ + I+ L
Sbjct: 72 TVIFFKDGEPVDEIIGAVPREEIEIRIKNLL 102
>pdb|2O89|A Chain A, S. Aureus Thioredoxin P31tC32S MUTANT
Length = 107
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 66/101 (65%), Gaps = 2/101 (1%)
Query: 81 VEDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 140
V DA + S V +SG LV+FWA WCG +MI P+++EL+ Y GK K++ DE+PS
Sbjct: 9 VTDADFDSKV-ESGVQ-LVDFWATWCGTSKMIAPVLEELAADYEGKADILKLDVDENPST 66
Query: 141 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
A +Y + SIPT+++FK+G+ D V+G PK L ++K L
Sbjct: 67 AAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 107
>pdb|2L5L|A Chain A, Solution Structure Of Thioredoxin From Bacteroides
Vulgatus
Length = 136
Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 63/90 (70%)
Query: 92 DSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPT 151
+ P +V+F+A WCGPC+M+ PI+DEL+K+Y G++ YKV+T++ +A +GIRSIP+
Sbjct: 36 EGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQELAGAFGIRSIPS 95
Query: 152 VMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
++ K + GA+PK++ +I++FL
Sbjct: 96 ILFIPMEGKPEMAQGAMPKASFKKAIDEFL 125
>pdb|3HHV|A Chain A, The Crystal Structure Of The Thioredoxin A2 From
Sulfolobus Solfataricus
Length = 110
Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Query: 97 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFK 156
V+V+FWA WC PC ++ P+I+EL+ Y ++ K+NT+ES IA RYGI S+PT+M FK
Sbjct: 26 VVVDFWAEWCAPCLILAPVIEELANDY-PQVAFGKLNTEESQDIAMRYGIMSLPTIMFFK 84
Query: 157 NGEKKDTVIGAVPKSTLTTSIEKFL 181
NGE D ++GAVP+ + ++ L
Sbjct: 85 NGELVDQILGAVPREEIEVRLKSLL 109
>pdb|2IPA|A Chain A, Solution Structure Of Trx-Arsc Complex
Length = 104
Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 65/103 (63%), Gaps = 1/103 (0%)
Query: 80 AVEDATWQSLVLD-SGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESP 138
A+ AT QS + S VL +FWAPWCGP +MI P+++EL ++ KLK K++ DE+
Sbjct: 2 AIVKATDQSFSAETSEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQ 61
Query: 139 SIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
A +YG+ SIPT+++ K+GE +T +G PK L + K L
Sbjct: 62 ETAGKYGVMSIPTLLVLKDGEVVETSVGFKPKEALQELVNKHL 104
>pdb|2VOC|A Chain A, Thioredoxin A Active Site Mutants Form Mixed Disulfide
Dimers That Resemble Enzyme-substrate Reaction
Intermediate
pdb|2VOC|B Chain B, Thioredoxin A Active Site Mutants Form Mixed Disulfide
Dimers That Resemble Enzyme-substrate Reaction
Intermediate
Length = 112
Score = 90.9 bits (224), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Query: 80 AVEDATWQSLVLD-SGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESP 138
A+ AT QS + S VL +FWAPWCGP +MI P+++EL ++ KLK K++ DE+
Sbjct: 2 AIVKATDQSFSAETSEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQ 61
Query: 139 SIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEK 179
A +YG+ SIPT+++ K+GE +T +G PK L + K
Sbjct: 62 ETAGKYGVMSIPTLLVLKDGEVVETSVGFKPKEALQELVNK 102
>pdb|2L4Q|A Chain A, Solution Structures Of Oxidized And Reduced Thioredoxin C
From M. Tb
pdb|2L59|A Chain A, Solution Structures Of Oxidized And Reduced Thioredoxin C
From M. Tb
Length = 116
Score = 89.7 bits (221), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 62/93 (66%)
Query: 81 VEDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 140
V DA++ + VL S PVLV+FWA WCGPC+M+ P+++E++ + L K++ D +P
Sbjct: 12 VTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPET 71
Query: 141 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTL 173
A + + SIPT+++FK+G+ ++GA K+ L
Sbjct: 72 ARNFQVVSIPTLILFKDGQPVKRIVGAKGKAAL 104
>pdb|3HXS|A Chain A, Crystal Structure Of Bacteroides Fragilis Trxp
pdb|3HXS|B Chain B, Crystal Structure Of Bacteroides Fragilis Trxp
Length = 141
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 57/86 (66%)
Query: 96 PVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIF 155
P +V+F+A WCGPC+M+ PI++ELSK+Y GK+ YKVN D+ P +A +GI+SIPT+
Sbjct: 53 PAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPELARDFGIQSIPTIWFV 112
Query: 156 KNGEKKDTVIGAVPKSTLTTSIEKFL 181
+ +GA+ K L I+K L
Sbjct: 113 PMKGEPQVNMGALSKEQLKGYIDKVL 138
>pdb|2I1U|A Chain A, Mycobacterium Tuberculosis Thioredoxin C
Length = 121
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Query: 67 RRGAQIVCEAQET-AVEDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVG 125
R G+ E T V DA++ + VL S PVLV+FWA WCGPC+M+ P+++E++ +
Sbjct: 2 RWGSMTDSEKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERAT 61
Query: 126 KLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTL 173
L K++ D +P A + + SIPT+++FK+G+ ++GA K+ L
Sbjct: 62 DLTVAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAAL 109
>pdb|3HYP|A Chain A, Crystal Structure Of Bacteroides Fragilis Trxp_s105g
Mutant
pdb|3HYP|B Chain B, Crystal Structure Of Bacteroides Fragilis Trxp_s105g
Mutant
Length = 141
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 56/86 (65%)
Query: 96 PVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIF 155
P +V+F+A WCGPC+M+ PI++ELSK+Y GK+ YKVN D+ P +A +GI+ IPT+
Sbjct: 53 PAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPELARDFGIQGIPTIWFV 112
Query: 156 KNGEKKDTVIGAVPKSTLTTSIEKFL 181
+ +GA+ K L I+K L
Sbjct: 113 PMKGEPQVNMGALSKEQLKGYIDKVL 138
>pdb|2J23|A Chain A, Cross-Reactivity And Crystal Structure Of Malassezia
Sympodialis Thioredoxin (Mala S 13), A Member Of A New
Pan- Allergen Family
pdb|2J23|B Chain B, Cross-Reactivity And Crystal Structure Of Malassezia
Sympodialis Thioredoxin (Mala S 13), A Member Of A New
Pan- Allergen Family
Length = 121
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Query: 97 VLVEFWAPWCGPCRMIHPIIDELSKQYVG-KLKCYKVNTDESPSIATRYGIRSIPTVMIF 155
V+++FWA WCGPC+MI P+ +++S G K+ YKV+ DE IA GIR++PT + F
Sbjct: 36 VVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGIRAMPTFVFF 95
Query: 156 KNGEKKDTVIGAVPKSTLTTSIEK 179
KNG+K DTV+GA P S L +I +
Sbjct: 96 KNGQKIDTVVGADP-SKLQAAITQ 118
>pdb|3TCO|A Chain A, Crystallographic And Spectroscopic Characterization Of
Sulfolobus Solfataricus Trxa1 Provide Insights Into The
Determinants Of Thioredoxin Fold Stability
pdb|3TCO|B Chain B, Crystallographic And Spectroscopic Characterization Of
Sulfolobus Solfataricus Trxa1 Provide Insights Into The
Determinants Of Thioredoxin Fold Stability
pdb|3TCO|C Chain C, Crystallographic And Spectroscopic Characterization Of
Sulfolobus Solfataricus Trxa1 Provide Insights Into The
Determinants Of Thioredoxin Fold Stability
Length = 109
Score = 86.7 bits (213), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 61/92 (66%)
Query: 90 VLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSI 149
V+ + VLV+ WA WC PC + PI +++++Y GK ++N DE+ IA +Y + +I
Sbjct: 17 VIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQKIADKYSVLNI 76
Query: 150 PTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
PT +IF NG+ D+++GAV + TL +++ K+L
Sbjct: 77 PTTLIFVNGQLVDSLVGAVDEDTLESTVNKYL 108
>pdb|3NOF|A Chain A, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant
pdb|3NOF|B Chain B, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant
pdb|3O6T|A Chain A, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant In
Complex With Quinol Inhibitor Pmx464
pdb|3O6T|B Chain B, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant In
Complex With Quinol Inhibitor Pmx464
pdb|3O6T|C Chain C, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant In
Complex With Quinol Inhibitor Pmx464
pdb|3O6T|D Chain D, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant In
Complex With Quinol Inhibitor Pmx464
Length = 118
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 61/93 (65%)
Query: 81 VEDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 140
V DA++ + VL S PVLV+FWA WCGP +M+ P+++E++ + L K++ D +P
Sbjct: 14 VTDASFATDVLSSNKPVLVDFWATWCGPSKMVAPVLEEIATERATDLTVAKLDVDTNPET 73
Query: 141 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTL 173
A + + SIPT+++FK+G+ ++GA K+ L
Sbjct: 74 ARNFQVVSIPTLILFKDGQPVKRIVGAKGKAAL 106
>pdb|1M7T|A Chain A, Solution Structure And Dynamics Of The Human-Escherichia
Coli Thioredoxin Chimera: Insights Into Thermodynamic
Stability
Length = 107
Score = 79.7 bits (195), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 97 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFK 156
V+V+F A WCGPC+MI P LS++Y + +V+ D++ +A +YGIR IPT+++FK
Sbjct: 23 VVVDFSATWCGPCKMIKPFFHSLSEKY-SNVIFLEVDVDDAQDVAPKYGIRGIPTLLLFK 81
Query: 157 NGEKKDTVIGAVPKSTLTTSIEKFL 181
NGE T +GA+ K L ++ L
Sbjct: 82 NGEVAATKVGALSKGQLKEFLDANL 106
>pdb|1THX|A Chain A, Thioredoxin-2
Length = 115
Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 58/101 (57%)
Query: 81 VEDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 140
+ DA ++S VL + PVLV FWA WCGPC+++ P+I+ + Y +LK K+ D +P+
Sbjct: 12 ITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPTT 71
Query: 141 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
+Y + +P + + K + D+ G + K L + ++ L
Sbjct: 72 VKKYKVEGVPALRLVKGEQILDSTEGVISKDKLLSFLDTHL 112
>pdb|2VM1|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Ammonium Sulfate As Precipitant
pdb|2VM1|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Ammonium Sulfate As Precipitant
pdb|2VM1|C Chain C, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Ammonium Sulfate As Precipitant
pdb|2VM1|D Chain D, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Ammonium Sulfate As Precipitant
pdb|2VM2|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Peg As Precipitant
pdb|2VM2|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Peg As Precipitant
pdb|2VM2|C Chain C, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Peg As Precipitant
pdb|2VM2|D Chain D, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Peg As Precipitant
Length = 118
Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 67 RRGAQIVCEAQETAVEDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGK 126
GA I C ++ E T + D+G V+++F A WCGPCR+I P+ E +K++ G
Sbjct: 4 EEGAVIACHTKQ---EFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFPGA 60
Query: 127 LKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGA 167
+ KV+ DE +A Y + ++PT + K+GEK D+V+G
Sbjct: 61 I-FLKVDVDELKDVAEAYNVEAMPTFLFIKDGEKVDSVVGG 100
>pdb|1XWA|A Chain A, Drospohila Thioredoxin, Oxidized, P41212
pdb|1XWA|B Chain B, Drospohila Thioredoxin, Oxidized, P41212
pdb|1XWA|C Chain C, Drospohila Thioredoxin, Oxidized, P41212
pdb|1XWA|D Chain D, Drospohila Thioredoxin, Oxidized, P41212
Length = 111
Score = 76.6 bits (187), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 47/78 (60%)
Query: 93 SGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTV 152
SG V+++F+A WCGPC+MI P + ELS Q+ + KV+ DE IA Y I S+PT
Sbjct: 24 SGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISSMPTF 83
Query: 153 MIFKNGEKKDTVIGAVPK 170
+ KNG K + GA K
Sbjct: 84 VFLKNGVKVEEFAGANAK 101
>pdb|1XW9|A Chain A, Drospohila Thioredoxin, Oxidized, P21
pdb|1XW9|B Chain B, Drospohila Thioredoxin, Oxidized, P21
pdb|1XW9|C Chain C, Drospohila Thioredoxin, Oxidized, P21
pdb|1XW9|D Chain D, Drospohila Thioredoxin, Oxidized, P21
pdb|1XWB|A Chain A, Drospohila Thioredoxin, Oxidized, P42212
pdb|1XWB|B Chain B, Drospohila Thioredoxin, Oxidized, P42212
pdb|1XWB|C Chain C, Drospohila Thioredoxin, Oxidized, P42212
pdb|1XWB|D Chain D, Drospohila Thioredoxin, Oxidized, P42212
pdb|1XWC|A Chain A, Drosophila Thioredoxin, Reduced, P6522
Length = 106
Score = 76.3 bits (186), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 47/78 (60%)
Query: 93 SGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTV 152
SG V+++F+A WCGPC+MI P + ELS Q+ + KV+ DE IA Y I S+PT
Sbjct: 19 SGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISSMPTF 78
Query: 153 MIFKNGEKKDTVIGAVPK 170
+ KNG K + GA K
Sbjct: 79 VFLKNGVKVEEFAGANAK 96
>pdb|2PPT|A Chain A, Crystal Structure Of Thioredoxin-2
pdb|2PPT|B Chain B, Crystal Structure Of Thioredoxin-2
Length = 155
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%)
Query: 96 PVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIF 155
P+LV+FWAPWCGPCR + P + G+++ K++T P++A R+ I+ IP ++F
Sbjct: 66 PLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHPAVAGRHRIQGIPAFILF 125
Query: 156 KNGEKKDTVIGAVPKSTLTTSIEKFL 181
G + GA P S L + L
Sbjct: 126 HKGRELARAAGARPASELVGFVRGKL 151
>pdb|2I9H|A Chain A, Nmr Solution Structure Of The Reduced Form Of Thioredoxin
1 From Yeast (Trx1)
Length = 103
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Query: 97 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFK 156
V+V+F+A WCGPC+MI P+I++ S+QY + YK++ DE +A + + ++PT+++FK
Sbjct: 21 VVVDFYATWCGPCKMIAPMIEKFSEQY-PQADFYKLDVDELGDVAQKNEVSAMPTLLLFK 79
Query: 157 NGEKKDTVIGAVPKS 171
NG++ V+GA P +
Sbjct: 80 NGKEVAKVVGANPAA 94
>pdb|3F3Q|A Chain A, Crystal Structure Of The Oxidised Form Of Thioredoxin 1
From Saccharomyces Cerevisiae
Length = 109
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Query: 97 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFK 156
V+V+F+A WCGPC+MI P+I++ S+QY + YK++ DE +A + + ++PT+++FK
Sbjct: 27 VVVDFYATWCGPCKMIAPMIEKFSEQY-PQADFYKLDVDELGDVAQKNEVSAMPTLLLFK 85
Query: 157 NGEKKDTVIGAVPKS 171
NG++ V+GA P +
Sbjct: 86 NGKEVAKVVGANPAA 100
>pdb|1UVZ|A Chain A, Structure Of Human Thioredoxin 2
pdb|1UVZ|B Chain B, Structure Of Human Thioredoxin 2
pdb|1UVZ|C Chain C, Structure Of Human Thioredoxin 2
pdb|1UVZ|D Chain D, Structure Of Human Thioredoxin 2
pdb|1UVZ|E Chain E, Structure Of Human Thioredoxin 2
pdb|1UVZ|F Chain F, Structure Of Human Thioredoxin 2
pdb|1W4V|A Chain A, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|B Chain B, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|C Chain C, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|D Chain D, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|E Chain E, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|F Chain F, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W89|A Chain A, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|B Chain B, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|C Chain C, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|D Chain D, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|E Chain E, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|F Chain F, Structure Of The Reduced Form Of Human Thioredoxin 2
Length = 119
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 59/96 (61%)
Query: 86 WQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYG 145
+Q V++S +PV+V+F A WCGPC+++ P ++++ + GK+ KV+ D+ +A Y
Sbjct: 23 FQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYE 82
Query: 146 IRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
+ ++PTV+ KNG+ D +G + L ++K +
Sbjct: 83 VSAVPTVLAMKNGDVVDKFVGIKDEDQLEAFLKKLI 118
>pdb|3F3R|A Chain A, Crystal Structure Of Yeast Thioredoxin1-Glutathione Mixed
Disulfide Complex
pdb|3F3R|B Chain B, Crystal Structure Of Yeast Thioredoxin1-Glutathione Mixed
Disulfide Complex
Length = 109
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 97 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFK 156
V+V+F+A WCGP +MI P+I++ S+QY + YK++ DE +A + + ++PT+++FK
Sbjct: 27 VVVDFYATWCGPSKMIAPMIEKFSEQY-PQADFYKLDVDELGDVAQKNEVSAMPTLLLFK 85
Query: 157 NGEKKDTVIGAVPKS 171
NG++ V+GA P +
Sbjct: 86 NGKEVAKVVGANPAA 100
>pdb|1SYR|A Chain A, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|B Chain B, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|C Chain C, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|D Chain D, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|E Chain E, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|F Chain F, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|G Chain G, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|H Chain H, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|I Chain I, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|J Chain J, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|K Chain K, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|L Chain L, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
Length = 112
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 90 VLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSI 149
++ V+V+F+A WCGPC+ I P +E SK Y K+ KV+ DE + + I S+
Sbjct: 22 IISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYT-KMVFIKVDVDEVSEVTEKENITSM 80
Query: 150 PTVMIFKNGEKKDTVIGAVPKSTLTTSIEKF 180
PT ++KNG DT++GA S L IEK+
Sbjct: 81 PTFKVYKNGSSVDTLLGA-NDSALKQLIEKY 110
>pdb|1XFL|A Chain A, Solution Structure Of Thioredoxin H1 From Arabidopsis
Thaliana
Length = 124
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 63/115 (54%), Gaps = 5/115 (4%)
Query: 67 RRGAQIVCEAQETAVEDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGK 126
G I C ET E + +S + V+V+F A WCGPCR I P +L+K+
Sbjct: 14 EEGQVIACHTVETWNEQLQKAN---ESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNV 70
Query: 127 LKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
L KV+TDE S+A+ + I+++PT M K G+ D V+GA K L ++I K L
Sbjct: 71 L-FLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGA-KKDELQSTIAKHL 123
>pdb|1WMJ|A Chain A, Solution Structure Of Thioredoxin Type H From Oryza Sativa
Length = 130
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Query: 92 DSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPT 151
++G V+++F A WCGPCR I P+ E +K++ G + KV+ DE +A +Y + ++PT
Sbjct: 34 EAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAV-FLKVDVDELKEVAEKYNVEAMPT 92
Query: 152 VMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
+ K+G + D V+GA K L +I K +
Sbjct: 93 FLFIKDGAEADKVVGA-RKDDLQNTIVKHV 121
>pdb|2FA4|A Chain A, Crystal Structure Of Oxidized Form From Saccharomyces
Cerevisiae
pdb|2FA4|B Chain B, Crystal Structure Of Oxidized Form From Saccharomyces
Cerevisiae
Length = 111
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Query: 79 TAVEDATWQSLVLDSGSP-VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDES 137
T ++ A+ L SG V+V+F+A WCGPC+MI P+I++ ++QY YK++ DE
Sbjct: 10 TQLKSASEYDSALASGDKLVVVDFFATWCGPCKMIAPMIEKFAEQY-SDAAFYKLDVDEV 68
Query: 138 PSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKS 171
+A + + S+PT++ +K G++ V+GA P +
Sbjct: 69 SDVAQKAEVSSMPTLIFYKGGKEVTRVVGANPAA 102
>pdb|2HSY|A Chain A, Solution Structure Of Thioredoxin 2 From Saccharomyces
Cerevisiae
Length = 104
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Query: 79 TAVEDATWQSLVLDSGSP-VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDES 137
T ++ A+ L SG V+V+F+A WCGPC+MI P+I++ ++QY YK++ DE
Sbjct: 3 TQLKSASEYDSALASGDKLVVVDFFATWCGPCKMIAPMIEKFAEQY-SDAAFYKLDVDEV 61
Query: 138 PSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKS 171
+A + + S+PT++ +K G++ V+GA P +
Sbjct: 62 SDVAQKAEVSSMPTLIFYKGGKEVTRVVGANPAA 95
>pdb|3QDN|A Chain A, Putative Thioredoxin Protein From Salmonella Typhimurium
pdb|3QDN|B Chain B, Putative Thioredoxin Protein From Salmonella Typhimurium
Length = 287
Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 54/100 (54%)
Query: 82 EDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIA 141
E Q+L +PVL FW+ C + P+++ L+ QY G+ K++ D IA
Sbjct: 14 ESNLQQTLEQSXTTPVLFYFWSERSQHCLQLTPVLESLAAQYHGQFILAKLDCDAEQXIA 73
Query: 142 TRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
++G+R+IPTV +F+NG+ D G P+ + ++K L
Sbjct: 74 AQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAIRALLDKVL 113
>pdb|3PIN|A Chain A, Crystal Structure Of Mxr1 From Saccharomyces Cerevisiae In
Complex With Trx2
Length = 104
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Query: 79 TAVEDATWQSLVLDSGSP-VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDES 137
T ++ A+ L SG V+V+F+A WCGP +MI P+I++ ++QY YK++ DE
Sbjct: 3 TQLKSASEYDSALASGDKLVVVDFFATWCGPSKMIAPMIEKFAEQY-SDAAFYKLDVDEV 61
Query: 138 PSIATRYGIRSIPTVMIFKNGEKKDTVIGAVP 169
+A + + S+PT++ +K G++ V+GA P
Sbjct: 62 SDVAQKAEVSSMPTLIFYKGGKEVTRVVGANP 93
>pdb|4DSS|B Chain B, Crystal Structure Of Peroxiredoxin Ahp1 From Saccharomyces
Cerevisiae In Complex With Thioredoxin Trx2
Length = 112
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Query: 79 TAVEDATWQSLVLDSGSP-VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDES 137
T ++ A+ L SG V+V+F+A WCGP +MI P+I++ ++QY YK++ DE
Sbjct: 11 TQLKSASEYDSALASGDKLVVVDFFATWCGPSKMIAPMIEKFAEQY-SDAAFYKLDVDEV 69
Query: 138 PSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKS 171
+A + + S+PT++ +K G++ V+GA P +
Sbjct: 70 SDVAQKAEVSSMPTLIFYKGGKEVTRVVGANPAA 103
>pdb|2VLT|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 2 In The
Oxidized State
pdb|2VLT|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 2 In The
Oxidized State
pdb|2VLU|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 2 In
Partially Radiation-Reduced State
pdb|2VLU|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 2 In
Partially Radiation-Reduced State
pdb|2VLV|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 2 In
Partially Radiation-Reduced State
pdb|2VLV|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 2 In
Partially Radiation-Reduced State
Length = 122
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 97 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFK 156
V+++F A WCGPCR++ P+ +L+K++ + KV+ DE IA ++ + ++PT + K
Sbjct: 37 VVIDFTASWCGPCRIMAPVFADLAKKFPNAV-FLKVDVDELKPIAEQFSVEAMPTFLFMK 95
Query: 157 NGEKKDTVIGAVPKSTLTTSI 177
G+ KD V+GA+ K LT +
Sbjct: 96 EGDVKDRVVGAI-KEELTAKV 115
>pdb|3ZZX|A Chain A, Crystallographic Structure Of Thioredoxin From Litopenaeus
Vannamei
pdb|3ZZX|B Chain B, Crystallographic Structure Of Thioredoxin From Litopenaeus
Vannamei
Length = 105
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 97 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFK 156
V+++F+A WCGPC+MI P ++ELS Q + + KV+ DE IA I +PT + K
Sbjct: 23 VVIDFYATWCGPCKMIAPKLEELS-QSMSDVVFLKVDVDECEDIAQDNQIACMPTFLFMK 81
Query: 157 NGEKKDTVIGA 167
NG+K D++ GA
Sbjct: 82 NGQKLDSLSGA 92
>pdb|2XBI|A Chain A, Crystal Structure Of Schistosoma Mansoni Thioredoxin At
1.6 Angstrom
Length = 108
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 82 EDATWQSLVLDSGSP-VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 140
+D +SL+ + V+V+F+A WCGPC+ I P+ ELS++Y KV+ D+
Sbjct: 11 QDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKYDAIF--VKVDVDKLEET 68
Query: 141 ATRYGIRSIPTVMIFKNGEKKDTVIGA 167
A +Y I ++PT + KNGEK V+GA
Sbjct: 69 ARKYNISAMPTFIAIKNGEKVGDVVGA 95
>pdb|3QOU|A Chain A, Crystal Structure Of E. Coli Ybbn
Length = 287
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%)
Query: 95 SPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMI 154
+PVL FW+ C + PI++ L+ QY G+ K++ D IA ++G+R+IPTV +
Sbjct: 27 TPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTVYL 86
Query: 155 FKNGEKKDTVIGAVPKSTLTTSIEKFL 181
F+NG+ D G P+ + ++ L
Sbjct: 87 FQNGQPVDGFQGPQPEEAIRALLDXVL 113
>pdb|2XBQ|A Chain A, Crystal Structure Of Reduced Schistosoma Mansoni
Thioredoxin Pre-Protein At 1.7 Angstrom
pdb|2XBQ|B Chain B, Crystal Structure Of Reduced Schistosoma Mansoni
Thioredoxin Pre-Protein At 1.7 Angstrom
pdb|2XC2|A Chain A, Crystal Structure Of Oxidized Schistosoma Mansoni
Thioredoxin Pre-Protein At 1.6 Angstrom
Length = 117
Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 82 EDATWQSLVLDSGSP-VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 140
+D +SL+ + V+V+F+A WCGPC+ I P+ ELS++Y KV+ D+
Sbjct: 20 QDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKYDAIF--VKVDVDKLEET 77
Query: 141 ATRYGIRSIPTVMIFKNGEKKDTVIGA 167
A +Y I ++PT + KNGEK V+GA
Sbjct: 78 ARKYNISAMPTFIAIKNGEKVGDVVGA 104
>pdb|1EP7|A Chain A, Crystal Structure Of Wt Thioredoxin H From Chlamydomonas
Reinhardtii
pdb|1EP7|B Chain B, Crystal Structure Of Wt Thioredoxin H From Chlamydomonas
Reinhardtii
pdb|1TOF|A Chain A, Thioredoxin H (Oxidized Form), Nmr, 23 Structures
Length = 112
Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 48/72 (66%)
Query: 96 PVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIF 155
P++V+F A WCGPC+MI P+ + LS Y GK+ KV+ D ++A GI ++PT ++
Sbjct: 26 PIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITAMPTFHVY 85
Query: 156 KNGEKKDTVIGA 167
K+G K D ++GA
Sbjct: 86 KDGVKADDLVGA 97
>pdb|1X5D|A Chain A, The Solution Structure Of The Second Thioredoxin-Like
Domain Of Human Protein Disulfide-Isomerase A6
Length = 133
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 83 DATWQSLVLDSGSPVLVEFWAPWCGPCRMIHP----IIDELSKQYVGKLKCYKVNTDESP 138
D ++ VLDS +VEF+APWCG C+ + P E+ +Q GK+K V+ +
Sbjct: 14 DDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQ 73
Query: 139 SIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTT 175
+A+RYGIR PT+ IF+ GE G +S + +
Sbjct: 74 VLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVS 110
>pdb|1EP8|A Chain A, Crystal Structure Of A Mutated Thioredoxin, D30a, From
Chlamydomonas Reinhardtii
pdb|1EP8|B Chain B, Crystal Structure Of A Mutated Thioredoxin, D30a, From
Chlamydomonas Reinhardtii
Length = 112
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 47/72 (65%)
Query: 96 PVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIF 155
P++V F A WCGPC+MI P+ + LS Y GK+ KV+ D ++A GI ++PT ++
Sbjct: 26 PIVVAFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITAMPTFHVY 85
Query: 156 KNGEKKDTVIGA 167
K+G K D ++GA
Sbjct: 86 KDGVKADDLVGA 97
>pdb|2IWT|A Chain A, Thioredoxin H2 (Hvtrxh2) In A Mixed Disulfide Complex With
The Target Protein Basi
Length = 125
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 97 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFK 156
V+++F A WCGP R++ P+ +L+K++ + KV+ DE IA ++ + ++PT + K
Sbjct: 40 VVIDFTASWCGPSRIMAPVFADLAKKFPNAV-FLKVDVDELKPIAEQFSVEAMPTFLFMK 98
Query: 157 NGEKKDTVIGAVPKSTLTTSI 177
G+ KD V+GA+ K LT +
Sbjct: 99 EGDVKDRVVGAI-KEELTAKV 118
>pdb|2VIM|A Chain A, X-Ray Structure Of Fasciola Hepatica Thioredoxin
Length = 104
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 92 DSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPT 151
+ G ++V+F+A WCGPCR I P ++ L+K+ + +++ KV+ D++ A +Y + ++PT
Sbjct: 17 NKGRLIVVDFFAQWCGPCRNIAPKVEALAKE-IPEVEFAKVDVDQNEEAAAKYSVTAMPT 75
Query: 152 VMIFKNGEKKDTVIGA 167
+ K+G++ D GA
Sbjct: 76 FVFIKDGKEVDRFSGA 91
>pdb|3HZ4|A Chain A, Crystal Structure Of Thioredoxin From Methanosarcina Mazei
pdb|3HZ4|B Chain B, Crystal Structure Of Thioredoxin From Methanosarcina Mazei
Length = 140
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%)
Query: 82 EDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIA 141
ED TW V DS PV+V F++P C C+ P +E +K+Y ++N +P A
Sbjct: 12 EDXTWSQQVEDSKKPVVVXFYSPACPYCKAXEPYFEEYAKEYGSSAVFGRINIATNPWTA 71
Query: 142 TRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
+YG++ PT F +G +G + S L ++ L
Sbjct: 72 EKYGVQGTPTFKFFCHGRPVWEQVGQIYPSILKNAVRDXL 111
>pdb|3GNJ|A Chain A, The Crystal Structure Of A Thioredoxin-Related Protein
From Desulfitobacterium Hafniense Dcb
pdb|3GNJ|B Chain B, The Crystal Structure Of A Thioredoxin-Related Protein
From Desulfitobacterium Hafniense Dcb
pdb|3GNJ|C Chain C, The Crystal Structure Of A Thioredoxin-Related Protein
From Desulfitobacterium Hafniense Dcb
pdb|3GNJ|D Chain D, The Crystal Structure Of A Thioredoxin-Related Protein
From Desulfitobacterium Hafniense Dcb
Length = 111
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 85 TWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRY 144
T++ L+ D G LV F C C+ + P+++EL Y Y V+ +E ++ R+
Sbjct: 13 TFEQLIYDEGKACLVXFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEKTLFQRF 72
Query: 145 GIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSI 177
++ +P ++ FK+GE K G V + I
Sbjct: 73 SLKGVPQILYFKDGEYKGKXAGDVEDDEVEQXI 105
>pdb|2DJ3|A Chain A, The Solution Structure Of The Third Thioredoxin Domain Of
Mouse Protein Disulfide-Isomerase A4
Length = 133
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 85 TWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGK--LKCYKVNTDESPSIAT 142
T+ ++V+D VL+EF+APWCG C+ + PI L K+Y G+ L K++ +
Sbjct: 16 TFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITND 75
Query: 143 RYGIRSIPTVMIFKNGEKKDTV 164
+Y + PT+ +G+KK+ +
Sbjct: 76 QYKVEGFPTIYFAPSGDKKNPI 97
>pdb|3M9J|A Chain A, Crystal Structure Of Human Thioredoxin C6973S DOUBLE
MUTANT, REDUCED Form
pdb|3M9J|B Chain B, Crystal Structure Of Human Thioredoxin C6973S DOUBLE
MUTANT, REDUCED Form
pdb|3M9K|A Chain A, Crystal Structure Of Human Thioredoxin C6973S
DOUBLE-Mutant, Oxidized Form
pdb|3M9K|B Chain B, Crystal Structure Of Human Thioredoxin C6973S
DOUBLE-Mutant, Oxidized Form
Length = 105
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 97 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFK 156
V+V+F A WCGPC+MI P LS++Y + +V+ D+ +A+ ++S+PT FK
Sbjct: 23 VVVDFSATWCGPCKMIKPFFHSLSEKY-SNVIFLEVDVDDCQDVASESEVKSMPTFQFFK 81
Query: 157 NGEKKDTVIGAVPKSTLTTSIEKFL 181
G+K GA K L +I + +
Sbjct: 82 KGQKVGEFSGA-NKEKLEATINELV 105
>pdb|2ALB|A Chain A, Nmr Structure Of The N-Terminal Domain A Of The
Glycoprotein Chaperone Erp57
Length = 113
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 83 DATWQSLVLDSGSP--VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 140
D ++S + D+GS +LVEF+APWCG C+ + P + + + G + KV+ + +
Sbjct: 8 DDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDCTANTNT 67
Query: 141 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEK 179
+YG+ PT+ IF++GE+ G + + ++K
Sbjct: 68 CNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKK 106
>pdb|2HSH|A Chain A, Crystal Structure Of C73s Mutant Of Human Thioredoxin-1
Oxidized With H2o2
pdb|1ERV|A Chain A, Human Thioredoxin Mutant With Cys 73 Replaced By Ser
(Reduced Form)
Length = 105
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 81 VEDATWQSLVLDSGSP--VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESP 138
+E T LD+ V+V+F A WCGPC+MI P LS++Y + +V+ D+
Sbjct: 5 IESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKY-SNVIFLEVDVDDCQ 63
Query: 139 SIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
+A+ ++S+PT FK G+K GA K L +I + +
Sbjct: 64 DVASECEVKSMPTFQFFKKGQKVGEFSGA-NKEKLEATINELV 105
>pdb|1TI3|A Chain A, Solution Structure Of The Thioredoxin H1 From Poplar, A
Cppc Active Site Variant
Length = 113
Score = 60.1 bits (144), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 97 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFK 156
++V+F A WC PC+MI PI EL+K++ + KV+ DE ++A + + ++PT + K
Sbjct: 29 IVVDFTASWCPPCKMIAPIFAELAKKF-PNVTFLKVDVDELKAVAEEWNVEAMPTFIFLK 87
Query: 157 NGEKKDTVIGAVPKSTLTTSIEK 179
+G+ D +GA K L T + K
Sbjct: 88 DGKLVDKTVGA-DKDGLPTLVAK 109
>pdb|1TRS|A Chain A, The High-Resolution Three-Dimensional Solution Structures
Of The Oxidized And Reduced States Of Human Thioredoxin
pdb|1TRU|A Chain A, The High-Resolution Three-Dimensional Solution Structures
Of The Oxidized And Reduced States Of Human Thioredoxin
pdb|1TRV|A Chain A, The High-resolution Three-dimensional Solution Structures
Of The Oxidized And Reduced States Of Human Thioredoxin
pdb|1TRW|A Chain A, The High-Resolution Three-Dimensional Solution Structures
Of The Oxidized And Reduced States Of Human Thioredoxin
Length = 105
Score = 60.1 bits (144), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 97 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFK 156
V+V+F A WCGPC+MI P LS++Y + +V+ D++ +A+ +++ PT FK
Sbjct: 23 VVVDFSATWCGPCKMIKPFFHSLSEKY-SNVIFLEVDVDDAQDVASEAEVKATPTFQFFK 81
Query: 157 NGEKKDTVIGAVPKSTLTTSIEKFL 181
G+K GA K L +I + +
Sbjct: 82 KGQKVGEFSGA-NKEKLEATINELV 105
>pdb|2OE0|A Chain A, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae
pdb|2OE0|B Chain B, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae
pdb|2OE1|A Chain A, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae (Reduced Form)
pdb|2OE1|B Chain B, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae (Reduced Form)
pdb|2OE3|A Chain A, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae (Oxidized Form)
pdb|2OE3|B Chain B, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae (Oxidized Form)
Length = 114
Score = 60.1 bits (144), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 54/90 (60%), Gaps = 6/90 (6%)
Query: 90 VLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSI 149
++ ++++F+A WCGPC+M+ P + +L + Y ++ K + DESP IA + ++
Sbjct: 26 LIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAY-PDVRFVKCDVDESPDIAKECEVTAM 84
Query: 150 PTVMIFKNGEKKDTVIGAVPKSTLTTSIEK 179
PT ++ K+G+ +IGA P T++EK
Sbjct: 85 PTFVLGKDGQLIGKIIGANP-----TALEK 109
>pdb|3KD0|A Chain A, Human Thioredoxin C35s,C62s,C69s,C73s Mutant Showing
Cadmium Chloride Bound To The Active Site
Length = 105
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 97 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFK 156
V+V+F A WCGP +MI P LS++Y + +V+ D+S +A+ ++S+PT FK
Sbjct: 23 VVVDFSATWCGPSKMIKPFFHSLSEKY-SNVIFLEVDVDDSQDVASESEVKSMPTFQFFK 81
Query: 157 NGEKKDTVIGA 167
G+K GA
Sbjct: 82 KGQKVGEFSGA 92
>pdb|2WZ9|A Chain A, Crystal Structure Of The Thioredoxin Domain Of Human Txnl2
Length = 153
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 89 LVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRS 148
L L + S ++V FWAPW C ++ ++ EL+K+ + ++ K+ + P ++ +Y I S
Sbjct: 27 LRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKE-LPQVSFVKLEAEGVPEVSEKYEISS 85
Query: 149 IPTVMIFKNGEKKDTVIGA 167
+PT + FKN +K D + GA
Sbjct: 86 VPTFLFFKNSQKIDRLDGA 104
>pdb|2IFQ|A Chain A, Crystal Structure Of S-Nitroso Thioredoxin
pdb|2IFQ|C Chain C, Crystal Structure Of S-Nitroso Thioredoxin
Length = 105
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 81 VEDATWQSLVLDSGSP--VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESP 138
+E T LD+ V+V+F A WCGPC+MI P LS++Y + +V+ D+
Sbjct: 5 IESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKY-SNVIFLEVDVDDCQ 63
Query: 139 SIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
+A+ ++ +PT FK G+K GA K L +I + +
Sbjct: 64 DVASEXEVKCMPTFQFFKKGQKVGEFSGA-NKEKLEATINELV 105
>pdb|1MEK|A Chain A, Human Protein Disulfide Isomerase, Nmr, 40 Structures
Length = 120
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 11/70 (15%)
Query: 97 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKC-------YKVNTDESPSIATRYGIRSI 149
+LVEF+APWCG C+ + P E +K GKLK KV+ E +A +YG+R
Sbjct: 27 LLVEFYAPWCGHCKALAP---EYAKA-AGKLKAEGSEIRLAKVDATEESDLAQQYGVRGY 82
Query: 150 PTVMIFKNGE 159
PT+ F+NG+
Sbjct: 83 PTIKFFRNGD 92
>pdb|2DIY|A Chain A, The Solution Structure Of The Thioredoxin Domain Of Human
Thioredoxin-Like Protein 2
Length = 130
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 89 LVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRS 148
L L + S ++V FWAPW C ++ ++ EL+K+ + ++ K+ + P ++ +Y I S
Sbjct: 33 LRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKE-LPQVSFVKLEAEGVPEVSEKYEISS 91
Query: 149 IPTVMIFKNGEKKDTVIGA 167
+PT + FKN +K D + GA
Sbjct: 92 VPTFLFFKNSQKIDRLDGA 110
>pdb|2IFQ|B Chain B, Crystal Structure Of S-Nitroso Thioredoxin
pdb|1AUC|A Chain A, Human Thioredoxin (Oxidized With Diamide)
pdb|1ERT|A Chain A, Human Thioredoxin (Reduced Form)
pdb|1ERU|A Chain A, Human Thioredoxin (Oxidized Form)
Length = 105
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 81 VEDATWQSLVLDSGSP--VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESP 138
+E T LD+ V+V+F A WCGPC+MI P LS++Y + +V+ D+
Sbjct: 5 IESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKY-SNVIFLEVDVDDCQ 63
Query: 139 SIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
+A+ ++ +PT FK G+K GA K L +I + +
Sbjct: 64 DVASECEVKCMPTFQFFKKGQKVGEFSGA-NKEKLEATINELV 105
>pdb|3TRX|A Chain A, High-Resolution Three-Dimensional Structure Of Reduced
Recombinant Human Thioredoxin In Solution
pdb|4TRX|A Chain A, High-Resolution Three-Dimensional Structure Of Reduced
Recombinant Human Thioredoxin In Solution
Length = 105
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Query: 81 VEDATWQSLVLDSGSP--VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESP 138
+E T LD+ V+V+F A WCGPC+MI P LS++Y + +V+ D+
Sbjct: 5 IESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKY-SNVIFLEVDVDDCQ 63
Query: 139 SIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
+A+ ++ PT FK G+K GA K L +I + +
Sbjct: 64 DVASECEVKCTPTFQFFKKGQKVGEFSGA-NKEKLEATINELV 105
>pdb|1MDI|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Mutant Human Thioredoxin And A 13
Residue Peptide Comprising Its Target Site In Human Nfkb
pdb|1MDJ|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Human Thioredoxin (c35a, C62a,
C69a, C73a) Mutant And A 13 Residue Peptide Comprising
Its Target Site In Human Nfkb (residues 56-68 Of The P50
Subunit Of Nfkb)
pdb|1MDK|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Human Thioredoxin (C35a, C62a,
C69a, C73a) Mutant And A 13 Residue Peptide Comprising
Its Target Site In Human Nfkb (Residues 56-68 Of The P50
Subunit Of Nfkb)
pdb|1CQH|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Human Thioredoxin (C35a, C62a,
C69a, C73a) Mutant And A 13 Residue Peptide Comprising
Its Target Site In Human Ref-1 (Residues 59-71 Of The
P50 Subunit Of Nfkb), Nmr, Minimized Average Structure
pdb|1CQG|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Human Thioredoxin (C35a, C62a,
C69a, C73a) Mutant And A 13 Residue Peptide Comprising
Its Target Site In Human Ref-1 (Residues 59-71 Of The
P50 Subunit Of Nfkb), Nmr, 31 Structures
Length = 105
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 97 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFK 156
V+V+F A WCGP +MI P LS++Y + +V+ D++ +A+ +++ PT FK
Sbjct: 23 VVVDFSATWCGPAKMIKPFFHSLSEKY-SNVIFLEVDVDDAQDVASEAEVKATPTFQFFK 81
Query: 157 NGEKKDTVIGAVPKSTLTTSIEKFL 181
G+K GA K L +I + +
Sbjct: 82 KGQKVGEFSGA-NKEKLEATINELV 105
>pdb|1AIU|A Chain A, Human Thioredoxin (D60n Mutant, Reduced Form)
Length = 105
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 81 VEDATWQSLVLDSGSP--VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESP 138
+E T LD+ V+V+F A WCGPC+MI P LS++Y + +V+ ++
Sbjct: 5 IESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKY-SNVIFLEVDVNDCQ 63
Query: 139 SIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
+A+ ++ +PT FK G+K GA K L +I + +
Sbjct: 64 DVASECEVKCMPTFQFFKKGQKVGEFSGA-NKEKLEATINELV 105
>pdb|3F8U|A Chain A, TapasinERP57 HETERODIMER
pdb|3F8U|C Chain C, TapasinERP57 HETERODIMER
Length = 481
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 83 DATWQSLVLDSGSP--VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI 140
D ++S + D+GS +LVEF+APWCG + + P + + + G + KV+ + +
Sbjct: 8 DDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGIVPLAKVDCTANTNT 67
Query: 141 ATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEK 179
+YG+ PT+ IF++GE+ G + + ++K
Sbjct: 68 CNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKK 106
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 85 TWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPS-IATR 143
+ +V + VL+EF+APWCG C+ + P EL ++ D + + + +
Sbjct: 361 NFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATANDVPSP 420
Query: 144 YGIRSIPTVMI 154
Y +R PT+
Sbjct: 421 YEVRGFPTIYF 431
>pdb|3QFA|C Chain C, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFA|D Chain D, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|C Chain C, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|D Chain D, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
Length = 116
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 81 VEDATWQSLVLDSGSP--VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESP 138
+E T LD+ V+V+F A WCGP +MI P LS++Y + +V+ D+
Sbjct: 16 IESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSNVI-FLEVDVDDCQ 74
Query: 139 SIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
+A+ ++S+PT FK G+K GA K L +I + +
Sbjct: 75 DVASECEVKSMPTFQFFKKGQKVGEFSGA-NKEKLEATINELV 116
>pdb|3VFI|A Chain A, Crystal Structure Of A Metagenomic Thioredoxin
Length = 104
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 50/94 (53%)
Query: 80 AVEDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPS 139
++ D+ +Q V P+++ F WC PC+ + P +E++ Q G ++ ++ +++
Sbjct: 3 SLSDSDFQLEVRQHPDPIIIMFTGSWCQPCKKMKPTFEEMASQMEGDIRFAYMDAEDAEK 62
Query: 140 IATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTL 173
IR++P++ +F +G ++ G + KS L
Sbjct: 63 TMAELNIRTLPSLALFVDGMIREVFSGTMNKSDL 96
>pdb|3APS|A Chain A, Crystal Structure Of Trx4 Domain Of Erdj5
pdb|3APS|B Chain B, Crystal Structure Of Trx4 Domain Of Erdj5
Length = 122
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%)
Query: 85 TWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRY 144
T+ VL + +V+F+APWCGPC+ P + L++ GK++ KV+ P +
Sbjct: 12 TFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKA 71
Query: 145 GIRSIPTVMIFKNGEKKDTV 164
GI++ P+V +++ K ++
Sbjct: 72 GIKAYPSVKLYQYERAKKSI 91
>pdb|3D21|A Chain A, Crystal Structure Of A Poplar Wild-Type Thioredoxin H,
Pttrxh4
pdb|3D21|B Chain B, Crystal Structure Of A Poplar Wild-Type Thioredoxin H,
Pttrxh4
Length = 139
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 93 SGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTV 152
G VL F A WCGPC+ I P ELS+ Y L ++ DE + + I++ PT
Sbjct: 45 DGKIVLANFSARWCGPCKQIAPYYIELSENYPS-LMFLVIDVDELSDFSASWEIKATPTF 103
Query: 153 MIFKNGEKKDTVIGA 167
++G++ D ++GA
Sbjct: 104 FFLRDGQQVDKLVGA 118
>pdb|3E3E|A Chain A, Human Thioredoxin Double Mutant C35s,C73r
pdb|3E3E|B Chain B, Human Thioredoxin Double Mutant C35s,C73r
Length = 105
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Query: 81 VEDATWQSLVLDSGSP--VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESP 138
+E T LD+ V+V+F A WCGP +MI P LS++Y + +V+ D+
Sbjct: 5 IESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKY-SNVIFLEVDVDDCQ 63
Query: 139 SIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
+A+ ++ +PT FK G+K GA K L +I + +
Sbjct: 64 DVASECEVKRMPTFQFFKKGQKVGEFSGA-NKEKLEATINELV 105
>pdb|2DIZ|A Chain A, The Solution Structure Of The Third Thioredoxin Domain Of
Human Thioredoxin Domain-Containing Protein 5
Length = 117
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 97 VLVEFWAPWCGPCRMIHPIIDELSKQY---VGKLKCYKVNTDESPSIATRYGIRSIPTVM 153
++F+APWCG C+ + P +ELSK+ + +K +V+ +I ++Y +R PT++
Sbjct: 26 TFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTLL 85
Query: 154 IFKNGEK 160
+F+ G+K
Sbjct: 86 LFRGGKK 92
>pdb|3UJ1|A Chain A, Crystal Structure Of The Third Thioredoxin Domain Of Human
Erp46
Length = 110
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 97 VLVEFWAPWCGPCRMIHPIIDELSKQY---VGKLKCYKVNTDESPSIATRYGIRSIPTVM 153
++F+APWCG C+ + P +ELSK+ + +K +V+ +I ++Y +R PT++
Sbjct: 19 TFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTLL 78
Query: 154 IFKNGEK 160
+F+ G+K
Sbjct: 79 LFRGGKK 85
>pdb|3UVT|A Chain A, Crystal Structure Of The Third Catalytic Domain Of Erp46
pdb|3UVT|B Chain B, Crystal Structure Of The Third Catalytic Domain Of Erp46
pdb|3UVT|C Chain C, Crystal Structure Of The Third Catalytic Domain Of Erp46
pdb|3UVT|D Chain D, Crystal Structure Of The Third Catalytic Domain Of Erp46
pdb|3UVT|E Chain E, Crystal Structure Of The Third Catalytic Domain Of Erp46
Length = 111
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 97 VLVEFWAPWCGPCRMIHPIIDELSKQY---VGKLKCYKVNTDESPSIATRYGIRSIPTVM 153
++F+APWCG C+ + P +ELSK+ + +K +V+ +I ++Y +R PT++
Sbjct: 24 TFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTLL 83
Query: 154 IFKNGEK 160
+F+ G+K
Sbjct: 84 LFRGGKK 90
>pdb|2DML|A Chain A, The Solution Structure Of The First Thioredoxin Domain Of
Mouse Protein Disulfide-Isomerase A6
Length = 130
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%)
Query: 90 VLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSI 149
V+ S LVEF+APWCG C+ + P + + +K VN D+ S+ +YG++
Sbjct: 31 VIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQSLGGQYGVQGF 90
Query: 150 PTVMIFKNGEKK 161
PT+ IF + K
Sbjct: 91 PTIKIFGANKNK 102
>pdb|3UL3|B Chain B, Structural Insights Into Thioredoxin-2: A Component Of
Malaria Parasite Protein Secretion Machinery
pdb|3UL3|A Chain A, Structural Insights Into Thioredoxin-2: A Component Of
Malaria Parasite Protein Secretion Machinery
Length = 128
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 41/64 (64%)
Query: 94 GSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVM 153
+ +++ F+A WC C M +D+L K Y ++ KV+ D++ S+A ++ ++S+PT++
Sbjct: 42 NTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNESLARKFSVKSLPTII 101
Query: 154 IFKN 157
+ KN
Sbjct: 102 LLKN 105
>pdb|3D22|A Chain A, Crystal Structure Of A Poplar Thioredoxin H Mutant,
Pttrxh4c61s
Length = 139
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 93 SGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTV 152
G VL F A WCGP R I P ELS+ Y L ++ DE + + I++ PT
Sbjct: 45 DGKIVLANFSARWCGPSRQIAPYYIELSENYPS-LMFLVIDVDELSDFSASWEIKATPTF 103
Query: 153 MIFKNGEKKDTVIGA 167
++G++ D ++GA
Sbjct: 104 FFLRDGQQVDKLVGA 118
>pdb|3IDV|A Chain A, Crystal Structure Of The A0a Fragment Of Erp72
Length = 241
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 81 VEDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGK---LKCYKVNTDES 137
+ DA + + V D + VL+EF+APWCG C+ P ++++ K + K++ +
Sbjct: 20 LNDANFDNFVADKDT-VLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSA 78
Query: 138 PSIATRYGIRSIPTVMIFKNGEKKD 162
+A+R+ + PT+ I K G+ D
Sbjct: 79 SVLASRFDVSGYPTIKILKKGQAVD 103
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 90 VLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGK---LKCYKVNTDESPSIATRYGI 146
V++ +LVEF+APWCG C+ + P ++ +K+ + + KV+ +A R+ +
Sbjct: 143 VVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDV 202
Query: 147 RSIPTVMIFKNGEKKD 162
PT+ IF+ G D
Sbjct: 203 SGYPTLKIFRKGRPYD 218
>pdb|1FAA|A Chain A, Crystal Structure Of Thioredoxin F From Spinach
Chloroplast (Long Form)
Length = 124
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 82 EDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVG----KLKCYKVNTDES 137
+D W + PV+++ + WCGPC+ + P ++L+++Y+ KL C E+
Sbjct: 25 KDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLDVIFLKLDC----NQEN 80
Query: 138 PSIATRYGIRSIPTVMIFKNGEKKDTVIGA 167
++A GIR +PT I K V GA
Sbjct: 81 KTLAKELGIRVVPTFKILKENSVVGEVTGA 110
>pdb|1F9M|A Chain A, Crystal Structure Of Thioredoxin F From Spinach
Chloroplast (Short Form)
pdb|1F9M|B Chain B, Crystal Structure Of Thioredoxin F From Spinach
Chloroplast (Short Form)
Length = 112
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 82 EDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVG----KLKCYKVNTDES 137
+D W + PV+++ + WCGPC+ + P ++L+++Y+ KL C E+
Sbjct: 13 KDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLDVIFLKLDC----NQEN 68
Query: 138 PSIATRYGIRSIPTVMIFKNGEKKDTVIGA 167
++A GIR +PT I K V GA
Sbjct: 69 KTLAKELGIRVVPTFKILKENSVVGEVTGA 98
>pdb|2DJ2|A Chain A, The Solution Structure Of The Second Thioredoxin Domain Of
Mouse Protein Disulfide-Isomerase A4
Length = 120
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 90 VLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGK---LKCYKVNTDESPSIATRYGI 146
V+++ +LVEF+APWCG C+ + P ++ +K+ + + KV+ E +A R+ +
Sbjct: 20 VVNNADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATEQTDLAKRFDV 79
Query: 147 RSIPTVMIFKNGEKKD 162
PT+ IF+ G D
Sbjct: 80 SGYPTLKIFRKGRPFD 95
>pdb|3UEM|A Chain A, Crystal Structure Of Human Pdi Bb'a' Domains
Length = 361
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 85 TWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRY 144
++ + D V VEF+APWCG C+ + PI D+L + Y D + +
Sbjct: 258 NFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEVEAV 317
Query: 145 GIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
+ S PT+ F + TVI + TL +KFL
Sbjct: 318 KVHSFPTLKFFPASADR-TVIDYNGERTL-DGFKKFL 352
>pdb|1X5C|A Chain A, The Solution Structure Of The Second Thioredoxin-Like
Domain Of Human Protein Disulfide-Isomerase
Length = 121
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 85 TWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRY 144
++ + D V VEF+APWCG C+ + PI D+L + Y D + +
Sbjct: 16 NFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEVEAV 75
Query: 145 GIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
+ S PT+ F + TVI + TL +KFL
Sbjct: 76 KVHSFPTLKFFPASADR-TVIDYNGERTL-DGFKKFL 110
>pdb|1ERW|A Chain A, Human Thioredoxin Double Mutant With Cys 32 Replaced By
Ser And Cys 35 Replaced By Ser
Length = 105
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 97 VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFK 156
V+V+F A W GP +MI P LS++Y + +V+ D+ +A+ ++ +PT FK
Sbjct: 23 VVVDFSATWSGPSKMIKPFFHSLSEKY-SNVIFLEVDVDDCQDVASECEVKCMPTFQFFK 81
Query: 157 NGEKKDTVIGAVPKSTLTTSIEKFL 181
G+K GA K L +I + +
Sbjct: 82 KGQKVGEFSGA-NKEKLEATINELV 105
>pdb|2HXK|A Chain A, Crystal Structure Of S-Nitroso Thioredoxin
pdb|2HXK|B Chain B, Crystal Structure Of S-Nitroso Thioredoxin
pdb|2HXK|C Chain C, Crystal Structure Of S-Nitroso Thioredoxin
pdb|2IIY|A Chain A, Crystal Structure Of S-Nitroso Thioredoxin
Length = 105
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 81 VEDATWQSLVLDSGSP--VLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESP 138
+E T LD+ V+V+F A WCGPC+MI P LS++Y + +V+ D+
Sbjct: 5 IESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVI-FLEVDVDDXQ 63
Query: 139 SIATRYGIRSIPTVMIFKNGEKKDTVIGA 167
+A+ ++ +PT FK G+K GA
Sbjct: 64 DVASEXEVKCMPTFQFFKKGQKVGEFSGA 92
>pdb|2F51|A Chain A, Structure Of Trichomonas Vaginalis Thioredoxin
pdb|2F51|B Chain B, Structure Of Trichomonas Vaginalis Thioredoxin
Length = 118
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 12/91 (13%)
Query: 97 VLVEFWAPWCGPCR---MIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVM 153
VLV+F+A WCGPC+ I P I E +K + KV+ D++ + A YG+ SIP +
Sbjct: 26 VLVDFFATWCGPCQRLGQILPSIAEANKD----VTFIKVDVDKNGNAADAYGVSSIPALF 81
Query: 154 IFKNGEKK----DTVIGAVPKSTLTTSIEKF 180
K + D +GA S + IEKF
Sbjct: 82 FVKKEGNEIKTLDQFVGA-DVSRIKADIEKF 111
>pdb|2R2J|A Chain A, Crystal Structure Of Human Erp44
Length = 382
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 90 VLDSGSPVLVEFWAPWCGPCRMIHPIIDELS----KQYVGKLKCY--KVNTDESPSIATR 143
+L++ LV F+A WC + +HPI +E S +++ + + +V+ D+ IA R
Sbjct: 18 ILNNADVALVNFYADWCRFSQXLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQR 77
Query: 144 YGIRSIPTVMIFKNG 158
Y I PT+ +F+NG
Sbjct: 78 YRISKYPTLKLFRNG 92
>pdb|3ED3|A Chain A, Crystal Structure Of The Yeast DithiolDISULFIDE
Oxidoreductase Mpd1p
pdb|3ED3|B Chain B, Crystal Structure Of The Yeast DithiolDISULFIDE
Oxidoreductase Mpd1p
Length = 298
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 85 TWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTD--ESPSIAT 142
++ + ++ LVEF+APWCG C+ + + +K+ G ++ VN D ++ ++
Sbjct: 26 SFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCA 85
Query: 143 RYGIRSIPTVMIFK 156
+Y + PT+M+F+
Sbjct: 86 KYDVNGFPTLMVFR 99
>pdb|2DJ1|A Chain A, The Solution Structure Of The First Thioredoxin Domain Of
Mouse Protein Disulfide-Isomerase A4
Length = 140
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 81 VEDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELS---KQYVGKLKCYKVNTDES 137
+ D + + V D + VL+EF+APWCG C+ P ++++ K + K++ +
Sbjct: 22 LNDGNFDNFVADKDT-VLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSA 80
Query: 138 PSIATRYGIRSIPTVMIFKNGEKKD 162
+A+++ + PT+ I K G+ D
Sbjct: 81 SMLASKFDVSGYPTIKILKKGQAVD 105
>pdb|2PU9|C Chain C, Crystal Srtucture Of The Binary Complex Between
Ferredoxin: Thioredoxin Reductase And Thioredoxin F
pdb|2PVO|C Chain C, Crystal Srtucture Of The Ternary Complex Between
Thioredoxin F, Ferredoxin, And Ferredoxin: Thioredoxin
Reductase
Length = 111
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Query: 82 EDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVG----KLKCYKVNTDES 137
+D W + PV+++ + WCGP + + P ++L+++Y+ KL C E+
Sbjct: 12 KDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLDVIFLKLDC----NQEN 67
Query: 138 PSIATRYGIRSIPTVMIFKNGEKKDTVIGA 167
++A GIR +PT I K V GA
Sbjct: 68 KTLAKELGIRVVPTFKILKENSVVGEVTGA 97
>pdb|3APO|A Chain A, Crystal Structure Of Full-Length Erdj5
Length = 780
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%)
Query: 85 TWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRY 144
T+ VL + +V+F+APW GP + P + L++ GK++ KV+ P +
Sbjct: 666 TFNEKVLQGKTHWVVDFYAPWSGPSQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKA 725
Query: 145 GIRSIPTVMIFKNGEKKDTV 164
GI++ P+V +++ K ++
Sbjct: 726 GIKAYPSVKLYQYERAKKSI 745
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%)
Query: 87 QSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGI 146
Q+ P LV+F+APW P R + P + + S G+LK ++ + Y I
Sbjct: 448 QNFPASDKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQLKVGTLDCTIHEGLCNMYNI 507
Query: 147 RSIPTVMIFK 156
++ PT ++F
Sbjct: 508 QAYPTTVVFN 517
Score = 31.6 bits (70), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/101 (16%), Positives = 44/101 (43%), Gaps = 18/101 (17%)
Query: 98 LVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIF-- 155
+V+F++PW P +++ P +++ G + V+ + S T+ ++ P + +
Sbjct: 567 MVDFYSPWSHPSQVLMPEWKRMARTLTGLINVGSVDCGQYHSFCTQENVQRYPEIRFYPQ 626
Query: 156 ----------KNGEKKDTV------IGAVPKSTLTTSIEKF 180
NG +D +G +P++++ + + F
Sbjct: 627 KSSKAYQYHSYNGWNRDAYSLRSWGLGFLPQASIDLTPQTF 667
>pdb|2DJJ|A Chain A, Solution Structure Of The A' Domain Of Thermophilic Fungal
Protein Disulfide Isomerase
pdb|2KP1|A Chain A, Solution Structure Of The A' Domain Of Thermophilic Fungal
Protein Disulfide Isomerase
Length = 121
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 75 EAQETAVEDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQY 123
E T V + +VLD VL+EF+APWCG C+ + P +EL Y
Sbjct: 6 EGPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALY 54
>pdb|2B5E|A Chain A, Crystal Structure Of Yeast Protein Disulfide Isomerase
pdb|3BOA|A Chain A, Crystal Structure Of Yeast Protein Disulfide Isomerase
Length = 504
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Query: 70 AQIVCEAQETAVED---ATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGK 126
+Q + E Q+++V +V D VLV ++APWCG C+ + P EL+ Y
Sbjct: 349 SQEIFENQDSSVFQLVGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANA 408
Query: 127 LKCYKV-NTDESPSIATRYGIRSIPTVMIFKNGEKKDTVI 165
+ D + + I PT++++ G+K ++V+
Sbjct: 409 TSDVLIAKLDHTENDVRGVVIEGYPTIVLYPGGKKSESVV 448
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 91 LDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGK-LKCYKVNTDESPSIATRYGIRSI 149
+ S VL EF+APWCG C+ + P + ++ V K + +++ E+ + + I
Sbjct: 28 IQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQDLCMEHNIPGF 87
Query: 150 PTVMIFKNGEKKDTVIGAVPKST 172
P++ IFKN + +++ P++
Sbjct: 88 PSLKIFKNSDVNNSIDYEGPRTA 110
>pdb|1R26|A Chain A, Crystal Structure Of Thioredoxin From Trypanosoma Brucei
Brucei
Length = 125
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 101 FWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEK 160
F A WCGPC+ I +++++ ++ +K KV+ D + I ++ + +PT +I ++G+
Sbjct: 44 FTAVWCGPCKTIERPMEKIAYEF-PTVKFAKVDADNNSEIVSKCRVLQLPTFIIARSGKM 102
Query: 161 KDTVIGAVP 169
VIGA P
Sbjct: 103 LGHVIGANP 111
>pdb|1X5E|A Chain A, The Solution Structure Of The Thioredoxin-Like Domain Of
Human Thioredoxin-Related Transmembrane Protein
Length = 126
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 81 VEDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVG-KLKCYKVNTDESPS 139
+ D W+ L+ ++EF+APWC C+ + P + ++ ++ KV+ E P
Sbjct: 12 ITDENWRELLEGD---WMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPG 68
Query: 140 IATRYGIRSIPTVMIFKNGE 159
++ R+ I ++PT+ K+GE
Sbjct: 69 LSGRFIINALPTIYHCKDGE 88
>pdb|3GL3|A Chain A, Crystal Structure Of A Putative Thiol:disulfide
Interchange Protein Dsbe From Chlorobium Tepidum
pdb|3GL3|B Chain B, Crystal Structure Of A Putative Thiol:disulfide
Interchange Protein Dsbe From Chlorobium Tepidum
pdb|3GL3|C Chain C, Crystal Structure Of A Putative Thiol:disulfide
Interchange Protein Dsbe From Chlorobium Tepidum
pdb|3GL3|D Chain D, Crystal Structure Of A Putative Thiol:disulfide
Interchange Protein Dsbe From Chlorobium Tepidum
Length = 152
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 93 SGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGK-LKCYKVNTDESPSIATRY 144
+GS V ++FWA WCGPCR P ++ +Y K + VN D A ++
Sbjct: 27 TGSVVYLDFWASWCGPCRQSFPWXNQXQAKYKAKGFQVVAVNLDAKTGDAXKF 79
>pdb|1FO5|A Chain A, Solution Structure Of Reduced Mj0307
Length = 85
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 101 FWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEK 160
F +P C C +++E++ + ++ +N E+P A YGI ++PT++I NG+
Sbjct: 9 FTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENPQKAMEYGIMAVPTIVI--NGDV 66
Query: 161 KDTVIGAVPKSTLTTSIEKFL 181
+ IGA K L +I+K L
Sbjct: 67 E--FIGAPTKEALVEAIKKRL 85
>pdb|1A8L|A Chain A, Protein Disulfide Oxidoreductase From Archaeon Pyrococcus
Furiosus
Length = 226
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 77 QETAVEDATWQSL-VLDSGSPVLVEFWAPWCGPC----RMIHPIIDELSKQYVGKLKCYK 131
+ET + D T Q++ +D +LV F P C C RM H E +K GK+
Sbjct: 117 EETNLMDETKQAIRNIDQDVRILV-FVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDM 175
Query: 132 VNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
V E P A +Y + ++P ++I NGE + GA P+ +EK L
Sbjct: 176 VEAIEYPEWADQYNVMAVPKIVIQVNGEDRVEFEGAYPEKMF---LEKLL 222
>pdb|2DMM|A Chain A, The Solution Structure Of The Second Thioredoxin Domain Of
Human Protein Disulfide-Isomerase A3
Length = 142
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 85 TWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPS-IATR 143
+ +V + VL+EF+APWCG C+ + P EL ++ D + + + +
Sbjct: 36 NFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATANDVPSP 95
Query: 144 YGIRSIPTVMI 154
Y +R PT+
Sbjct: 96 YEVRGFPTIYF 106
>pdb|3APQ|A Chain A, Crystal Structure Of J-Trx1 Fragment Of Erdj5
pdb|3APQ|B Chain B, Crystal Structure Of J-Trx1 Fragment Of Erdj5
Length = 210
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 39/84 (46%)
Query: 90 VLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSI 149
++SG V F++P C C + P E +K+ G L+ VN + + G+ S
Sbjct: 110 AVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSY 169
Query: 150 PTVMIFKNGEKKDTVIGAVPKSTL 173
P++ IF++G G K +L
Sbjct: 170 PSLFIFRSGMAAVKYNGDRSKESL 193
>pdb|2LJA|A Chain A, Solution Structure Of A Putative Thiol-Disulfide
Oxidoreductase From Bacteroides Vulgatus
Length = 152
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 88 SLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGK 126
SL G + ++ WA WCGPCR P + EL ++Y GK
Sbjct: 24 SLADLKGKYIYIDVWATWCGPCRGELPALKELEEKYAGK 62
>pdb|2B1L|A Chain A, Crystal Structure Of N-Terminal 57 Residue Deletion Mutant
Of E. Coli Ccmg Protein(Residues 58-185)
pdb|2B1L|B Chain B, Crystal Structure Of N-Terminal 57 Residue Deletion Mutant
Of E. Coli Ccmg Protein(Residues 58-185)
Length = 129
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 86 WQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQ 122
+Q+ VL G PVL+ WA WC CR H +++LS Q
Sbjct: 4 YQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ 40
>pdb|2G0F|A Chain A, Crystal Structure Of P144a Mutant Of E.Coli Ccmg Protein
Length = 168
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 86 WQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQ 122
+Q+ VL G PVL+ WA WC CR H +++LS Q
Sbjct: 43 YQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ 79
>pdb|3K8N|A Chain A, Crystal Structure Of E. Coli Ccmg
Length = 185
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 86 WQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQ 122
+Q+ VL G PVL+ WA WC CR H +++LS Q
Sbjct: 60 YQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ 96
>pdb|2B1K|A Chain A, Crystal Structure Of E. Coli Ccmg Protein
Length = 168
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 86 WQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQ 122
+Q+ VL G PVL+ WA WC CR H +++LS Q
Sbjct: 43 YQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ 79
>pdb|1J08|A Chain A, Crystal Structure Of Glutaredoxin-Like Protein From
Pyrococcus Horikoshii
pdb|1J08|B Chain B, Crystal Structure Of Glutaredoxin-Like Protein From
Pyrococcus Horikoshii
pdb|1J08|C Chain C, Crystal Structure Of Glutaredoxin-Like Protein From
Pyrococcus Horikoshii
pdb|1J08|D Chain D, Crystal Structure Of Glutaredoxin-Like Protein From
Pyrococcus Horikoshii
pdb|1J08|E Chain E, Crystal Structure Of Glutaredoxin-Like Protein From
Pyrococcus Horikoshii
pdb|1J08|F Chain F, Crystal Structure Of Glutaredoxin-Like Protein From
Pyrococcus Horikoshii
pdb|1J08|G Chain G, Crystal Structure Of Glutaredoxin-Like Protein From
Pyrococcus Horikoshii
pdb|1J08|H Chain H, Crystal Structure Of Glutaredoxin-Like Protein From
Pyrococcus Horikoshii
Length = 226
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 73 VCEAQETAVEDATWQSLVLDSGSPVLVEFWAPWCGPC----RMIHPIIDELSKQYVGKLK 128
V + ++D+ + +D +L+ F P C C RM H E +K GK+
Sbjct: 114 VSKGDTDLMQDSKEEVSKIDKDVRILI-FVTPTCPYCPLAVRMAHKFAIENTKAGKGKIL 172
Query: 129 CYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 181
V E P A +Y + ++P ++I NGE K GA P+ +EK L
Sbjct: 173 GDMVEAIEYPEWADQYNVMAVPKIVIQVNGEDKVQFEGAYPEKMF---LEKLL 222
>pdb|2DJ0|A Chain A, The Solution Structure Of The Thioredoxin Domain Of Human
Thioredoxin-Related Transmembrane Protein 2
Length = 137
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 98 LVEFWAPWCGPCRMIHPIIDELSKQY-VGKLKCYKVNTDESPSIATRYGI------RSIP 150
+VEF+A W C+ PI +LS +Y L KV+ ++TRY + + +P
Sbjct: 30 IVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPLTKQLP 89
Query: 151 TVMIFKNGEK 160
T+++F+ G++
Sbjct: 90 TLILFQGGKE 99
>pdb|1JFU|A Chain A, Crystal Structure Of The Soluble Domain Of Tlpa From
Bradyrhizobium Japonicum
pdb|1JFU|B Chain B, Crystal Structure Of The Soluble Domain Of Tlpa From
Bradyrhizobium Japonicum
Length = 186
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 78 ETAVEDATWQSLVLDS--GSPVLVEFWAPWCGPCRMIHPIIDELSKQYVG-KLKCYKVNT 134
+ A EDA + L G +LV WA WC PCR P +DEL + G + +N
Sbjct: 42 DLAFEDADGKPKKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINI 101
Query: 135 D 135
D
Sbjct: 102 D 102
>pdb|3HDC|A Chain A, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
Length = 158
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 41/103 (39%), Gaps = 21/103 (20%)
Query: 87 QSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQY-VGKLKCYKVN------------ 133
+SL G VLV FWA WC CR P D L K + G L VN
Sbjct: 34 KSLAQYRGKIVLVNFWASWCPYCRDEXPSXDRLVKSFPKGDLVVLAVNVEKRFPEKYRRA 93
Query: 134 -------TDESPSIATRYGIRSIP-TVMIFKNGEKKDTVIGAV 168
+D + + RYG +P T ++ + G + V G +
Sbjct: 94 PVSFNFLSDATGQVQQRYGANRLPDTFIVDRKGIIRQRVTGGI 136
>pdb|3CXG|A Chain A, Crystal Structure Of Plasmodium Falciparum Thioredoxin,
Pfi0790w
pdb|3CXG|B Chain B, Crystal Structure Of Plasmodium Falciparum Thioredoxin,
Pfi0790w
Length = 133
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 68 RGAQIVCEAQETAVEDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPII-DELSKQYVGK 126
+G I E + T + + S S ++++F A WC PC I ++L+ YV
Sbjct: 17 QGQSIYIELKNTGSLNQVFSST---QNSSIVIKFGAVWCKPCNKIKEYFKNQLNYYYVTL 73
Query: 127 LKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEK 179
+ ++ D P + ++ I+++PT + N + ++ V + IEK
Sbjct: 74 V---DIDVDIHPKLNDQHNIKALPTFEFYFNLNNEWVLVHTVEGAN-QNDIEK 122
>pdb|1Z5Y|E Chain E, Crystal Structure Of The Disulfide-linked Complex Between
The N-terminal Domain Of The Electron Transfer Catalyst
Dsbd And The Cytochrome C Biogenesis Protein Ccmg
Length = 149
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 86 WQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQ 122
+Q+ VL G PVL+ WA WC R H +++LS Q
Sbjct: 18 YQADVLTQGKPVLLNVWATWCPTSRAEHQYLNQLSAQ 54
>pdb|3KH7|A Chain A, Crystal Structure Of The Periplasmic Soluble Domain Of
Reduced Ccmg From Pseudomonas Aeruginosa
pdb|3KH9|A Chain A, Crystal Structure Of The Periplasmic Soluble Domain Of
Oxidized Ccmg From Pseudomonas Aeruginosa
Length = 176
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 94 GSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRY 144
G P LV W WC CR+ HP + L++Q V Y +N + + A ++
Sbjct: 58 GKPALVNVWGTWCPSCRVEHPELTRLAEQGV---VIYGINYKDDNAAAIKW 105
>pdb|1GH2|A Chain A, Crystal Structure Of The Catalytic Domain Of A New Human
Thioredoxin-Like Protein
Length = 107
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 83 DATWQSLVLDSGSPV-LVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIA 141
D +Q + +GS + +V+F CGPC I P +S +Y + +V+ + A
Sbjct: 9 DPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAV-FLEVDVHQCQGTA 67
Query: 142 TRYGIRSIPTVMIFKNGEKKDTVIGA 167
I + PT F+N + D GA
Sbjct: 68 ATNNISATPTFQFFRNKVRIDQYQGA 93
>pdb|3KCM|A Chain A, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
pdb|3KCM|B Chain B, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
pdb|3KCM|C Chain C, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
pdb|3KCM|D Chain D, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
pdb|3KCM|E Chain E, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
pdb|3KCM|F Chain F, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
Length = 154
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 94 GSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGK-LKCYKVNTDESPSIATRYGIR 147
G V+V FWA WC PCR P L+ GK + V+ DE +A R
Sbjct: 28 GQVVIVNFWATWCPPCREEIPSXXRLNAAXAGKPFRXLCVSIDEGGKVAVEEFFR 82
>pdb|1ZZO|A Chain A, Structure Of Mtb Dsbf In Its Oxidized Form
Length = 136
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 50/127 (39%), Gaps = 25/127 (19%)
Query: 70 AQIVCEAQETAVEDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELS--------- 120
AQ+ A+ D +SL+ G P ++ FWAPWC C+ P++ +++
Sbjct: 4 AQLQFSAKTLDGHDFHGESLL---GKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFV 60
Query: 121 -----------KQYVGK--LKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGA 167
+++V K +K + D S+ +G+ P D V G
Sbjct: 61 GVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRGR 120
Query: 168 VPKSTLT 174
+ + LT
Sbjct: 121 MSQDELT 127
>pdb|3IOS|A Chain A, Structure Of Mtb Dsbf In Its Mixed Oxidized And Reduced
Forms
Length = 150
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 50/127 (39%), Gaps = 25/127 (19%)
Query: 70 AQIVCEAQETAVEDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELS--------- 120
AQ+ A+ D +SL+ G P ++ FWAPWC C+ P++ +++
Sbjct: 18 AQLQFSAKTLDGHDFHGESLL---GKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFV 74
Query: 121 -----------KQYVGK--LKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGA 167
+++V K +K + D S+ +G+ P D V G
Sbjct: 75 GVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVDVVRGR 134
Query: 168 VPKSTLT 174
+ + LT
Sbjct: 135 MSQDELT 141
>pdb|2KUC|A Chain A, Solution Structure Of A Putative Disulphide-Isomerase From
Bacteroides Thetaiotaomicron
Length = 130
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 97 VLVEFWAPWCGPCRMIHPII--DELSKQYVGK-LKCYKVNTDESPSIATR--YGIRSIPT 151
+ V+ + WCGPC+ + ++ D L Y + K++ ++ + R YG+ + PT
Sbjct: 30 LFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGVHAYPT 89
Query: 152 VM-IFKNGEKKDTVIGA 167
++ I +GE ++GA
Sbjct: 90 LLFINSSGEVVYRLVGA 106
>pdb|3Q6O|A Chain A, Oxidoreductase Fragment Of Human Qsox1
Length = 244
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 11/85 (12%)
Query: 79 TAVEDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQ--------YVGKLKCY 130
T ++ T + VL S S VEF+A WCG C P L++ Y+ L C
Sbjct: 15 TLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCA 74
Query: 131 KVNTDESPSIATRYGIRSIPTVMIF 155
+ + + ++ + I PTV F
Sbjct: 75 E---ETNSAVCRDFNIPGFPTVRFF 96
>pdb|1KNG|A Chain A, Crystal Structure Of Ccmg Reducing Oxidoreductase At 1.14
A
Length = 156
Score = 34.7 bits (78), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 6/52 (11%)
Query: 98 LVEFWAPWCGPCRMIHPIIDELSK----QYVGKLKCYKVNTDESPSIATRYG 145
LV WA WC PC P++ EL K Q VG YK D + RYG
Sbjct: 46 LVNVWASWCVPCHDEAPLLTELGKDKRFQLVG--INYKDAADNARRFLGRYG 95
>pdb|3D6I|A Chain A, Structure Of The Thioredoxin-Like Domain Of Yeast
Glutaredoxin 3
pdb|3D6I|B Chain B, Structure Of The Thioredoxin-Like Domain Of Yeast
Glutaredoxin 3
Length = 112
Score = 34.7 bits (78), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 16/75 (21%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 97 VLVEFWAPWCGPCRMIHPIIDELSKQ-YVGKLKCYKVNTDESPSIATRYGIRSIPTVMIF 155
+++ F W PC+ + + + +S + + ++ DE+ I+ + I ++P +I
Sbjct: 24 IVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSEISELFEISAVPYFIII 83
Query: 156 KNGEKKDTVIGAVPK 170
G + GA PK
Sbjct: 84 HKGTILKELSGADPK 98
>pdb|4EVM|A Chain A, 1.5 Angstrom Crystal Structure Of Soluble Domain Of
Membrane-Anchored Thioredoxin Family Protein From
Streptococcus Pneumoniae Strain Canada Mdr_19a
Length = 138
Score = 34.3 bits (77), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 44/116 (37%), Gaps = 29/116 (25%)
Query: 94 GSPVLVEFWAPWCGPCRMIHPIIDELSKQ---------------------------YVG- 125
G V ++FWA WC C P DE++K+ Y G
Sbjct: 22 GKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGL 81
Query: 126 KLKCYKVNTDESPSIATRYGIRSIPT-VMIFKNGEKKDTVIGAVPKSTLTTSIEKF 180
K V D S + YG+RS PT I K G+ T G + K + ++++
Sbjct: 82 DYKNLPVLVDPSGKLLETYGVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKEL 137
>pdb|1NHO|A Chain A, Structural And Functional Characterization Of A
Thioredoxin-Like Protein From Methanobacterium
Thermoautotrophicum
Length = 85
Score = 34.3 bits (77), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 101 FWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNG 158
F +P C C M ++DE K++ K+ K++ A YG+ ++P + I NG
Sbjct: 8 FTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDREKAIEYGLMAVPAIAI--NG 63
>pdb|2HLS|A Chain A, The Crystal Structure Of A Protein Disulfide
Oxidoreductase From Aeropyrum Pernix K1
pdb|2HLS|B Chain B, The Crystal Structure Of A Protein Disulfide
Oxidoreductase From Aeropyrum Pernix K1
Length = 243
Score = 33.9 bits (76), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Query: 77 QETAVEDATWQSLVLDSGSPVLVEFWAPWCGPC----RMIHPIIDELSKQYVGKLKCYKV 132
E+ +EDAT ++L G + P C C + H E KQ + V
Sbjct: 121 DESGLEDATKEALKSLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAV 180
Query: 133 NTDESPSIATRYGIRSIPTVMIFKNG 158
E+P IA +YG+ S+P++ I NG
Sbjct: 181 EAYENPDIADKYGVMSVPSIAI--NG 204
>pdb|1BED|A Chain A, Structure Of Disulfide Oxidoreductase
Length = 181
Score = 33.5 bits (75), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 93 SGSPVLVEFWAPWCGPCRMIHPIIDELSKQ 122
S SPV+ EF++ +C C PII +L +Q
Sbjct: 17 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQ 46
>pdb|2IJY|A Chain A, Nmr Structure Ensemble For The Reduced Dsba Disulphide
Oxidoreductase From Vibrio Cholerae
Length = 181
Score = 33.5 bits (75), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 93 SGSPVLVEFWAPWCGPCRMIHPIIDELSKQ 122
S SPV+ EF++ +C C PII +L +Q
Sbjct: 17 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQ 46
>pdb|4DVC|A Chain A, Structural And Functional Studies Of Tcpg, The Vibrio
Cholerae Dsba Disulfide-Forming Protein Required For
Pilus And Cholera Toxin Production
Length = 184
Score = 33.5 bits (75), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 93 SGSPVLVEFWAPWCGPCRMIHPIIDELSKQ 122
S SPV+ EF++ +C C PII +L +Q
Sbjct: 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQ 49
>pdb|3RAZ|A Chain A, The Crystal Structure Of Thioredoxin-Related Protein From
Neisseria Meningitidis Serogroup B
Length = 151
Score = 33.5 bits (75), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 82 EDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSK-QYVGKLKCYKVNTDESPSI 140
+D T QSL +V WA WCGPCR P + K Q G + + D S +I
Sbjct: 12 KDNTPQSLQSLKAPVRIVNLWATWCGPCRKEXPAXSKWYKAQKKGSVDXVGIALDTSDNI 71
Query: 141 AT 142
Sbjct: 72 GN 73
>pdb|2H1B|A Chain A, Resa E80q
pdb|2H1B|B Chain B, Resa E80q
pdb|2H1B|C Chain C, Resa E80q
pdb|2H1B|D Chain D, Resa E80q
Length = 143
Score = 33.1 bits (74), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 8/86 (9%)
Query: 75 EAQETAVEDATWQSLVLDS--GSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGK-LKCYK 131
+A +ED + + L G V + FW WC PC+ P + K + + ++
Sbjct: 5 DAPNFVLEDTNGKRIELSDLKGKGVFLNFWGTWCEPCKKQFPYMANQYKHFKSQGVEIVA 64
Query: 132 VNTDES----PSIATRYGIRSIPTVM 153
VN ES + YG+ + P V+
Sbjct: 65 VNVGESKIAVHNFMKSYGV-NFPVVL 89
>pdb|1ST9|A Chain A, Crystal Structure Of A Soluble Domain Of Resa In The
Oxidised Form
pdb|1ST9|B Chain B, Crystal Structure Of A Soluble Domain Of Resa In The
Oxidised Form
pdb|1SU9|A Chain A, Reduced Structure Of The Soluble Domain Of Resa
pdb|1SU9|B Chain B, Reduced Structure Of The Soluble Domain Of Resa
pdb|2H1D|A Chain A, Resa Ph 9.25
pdb|2H1D|B Chain B, Resa Ph 9.25
Length = 143
Score = 33.1 bits (74), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 74 CEAQETAVEDATWQSLVLDS--GSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGK-LKCY 130
+A +ED + + L G V + FW WC PC+ P + K + + ++
Sbjct: 4 SDAPNFVLEDTNGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIV 63
Query: 131 KVNTDES----PSIATRYGIRSIPTVM 153
VN ES + YG+ + P V+
Sbjct: 64 AVNVGESKIAVHNFMKSYGV-NFPVVL 89
>pdb|2F9S|A Chain A, 2nd Crystal Structure Of A Soluble Domain Of Resa In The
Oxidised Form
pdb|2F9S|B Chain B, 2nd Crystal Structure Of A Soluble Domain Of Resa In The
Oxidised Form
Length = 151
Score = 32.0 bits (71), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 8/86 (9%)
Query: 75 EAQETAVEDATWQSLVLDS--GSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGK-LKCYK 131
+A +ED + + L G V + FW WC PC+ P K + + ++
Sbjct: 5 DAPNFVLEDTNGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPYXANQYKHFKSQGVEIVA 64
Query: 132 VNTDES----PSIATRYGIRSIPTVM 153
VN ES + YG+ + P V+
Sbjct: 65 VNVGESKIAVHNFXKSYGV-NFPVVL 89
>pdb|1UC7|A Chain A, Crystal Structure Of Dsbdgamma
pdb|1UC7|B Chain B, Crystal Structure Of Dsbdgamma
Length = 125
Score = 31.6 bits (70), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 32/79 (40%), Gaps = 6/79 (7%)
Query: 83 DATWQSLVLDSGSPVLVEFWAPWCGPCRMIH------PIIDELSKQYVGKLKCYKVNTDE 136
D Q+LV G PV+++ +A WC C+ P + + V N +
Sbjct: 17 DELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQANVTANDAQ 76
Query: 137 SPSIATRYGIRSIPTVMIF 155
++ + +PT++ F
Sbjct: 77 DVALLKHLNVLGLPTILFF 95
>pdb|1O73|A Chain A, Tryparedoxin From Trypanosoma Brucei
Length = 144
Score = 31.6 bits (70), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 35/86 (40%), Gaps = 26/86 (30%)
Query: 94 GSPVLVEFWAPWCGPCRMIHPIIDELSKQ-----------------------YVGKLKCY 130
G V + F A WC PCR P++ E ++ Y GK+
Sbjct: 28 GKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWL 87
Query: 131 KVNTDESPSIAT---RYGIRSIPTVM 153
+ D+ +++ +G+ SIPT++
Sbjct: 88 ALPFDQRSTVSELGKTFGVESIPTLI 113
>pdb|2FWE|A Chain A, Crystal Structure Of The C-Terminal Domain Of The Electron
Transfer Catalyst Dsbd (Oxidized Form)
pdb|2FWF|A Chain A, High Resolution Crystal Structure Of The C-Terminal Domain
Of The Electron Transfer Catalyst Dsbd (Reduced Form)
pdb|2FWG|A Chain A, High Resolution Crystal Structure Of The C-Terminal Domain
Of The Electron Transfer Catalyst Dsbd (Photoreduced
Form)
pdb|2FWH|A Chain A, Atomic Resolution Crystal Structure Of The C-Terminal
Domain Of The Electron Transfer Catalyst Dsbd (Reduced
Form At Ph7)
Length = 134
Score = 31.6 bits (70), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 32/79 (40%), Gaps = 6/79 (7%)
Query: 83 DATWQSLVLDSGSPVLVEFWAPWCGPCRMIH------PIIDELSKQYVGKLKCYKVNTDE 136
D Q+LV G PV+++ +A WC C+ P + + V N +
Sbjct: 20 DELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQANVTANDAQ 79
Query: 137 SPSIATRYGIRSIPTVMIF 155
++ + +PT++ F
Sbjct: 80 DVALLKHLNVLGLPTILFF 98
>pdb|3T58|A Chain A, C76aC455S MUTANT OF MOUSE QSOX1 CONTAINING AN INTERDOMAIN
DISULFIDE
pdb|3T58|B Chain B, C76aC455S MUTANT OF MOUSE QSOX1 CONTAINING AN INTERDOMAIN
DISULFIDE
pdb|3T58|C Chain C, C76aC455S MUTANT OF MOUSE QSOX1 CONTAINING AN INTERDOMAIN
DISULFIDE
pdb|3T58|D Chain D, C76aC455S MUTANT OF MOUSE QSOX1 CONTAINING AN INTERDOMAIN
DISULFIDE
pdb|3T59|A Chain A, C76aC455S MUTANT OF MOUSE QSOX1 CONTAINING AN INTERDOMAIN
DISULFIDE
pdb|3T59|B Chain B, C76aC455S MUTANT OF MOUSE QSOX1 CONTAINING AN INTERDOMAIN
DISULFIDE
pdb|3T59|C Chain C, C76aC455S MUTANT OF MOUSE QSOX1 CONTAINING AN INTERDOMAIN
DISULFIDE
pdb|3T59|D Chain D, C76aC455S MUTANT OF MOUSE QSOX1 CONTAINING AN INTERDOMAIN
DISULFIDE
Length = 519
Score = 31.6 bits (70), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 9/78 (11%)
Query: 90 VLDSGSPVLVEFWAPWCGPCRMIHPIIDELS---KQYVGKLKCYKVNTDE--SPSIATRY 144
VL S S VEF+A WCG P EL+ K + L ++ E + ++ +
Sbjct: 26 VLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREF 85
Query: 145 GIRSIPTVMIF----KNG 158
I PTV F KNG
Sbjct: 86 NIAGFPTVRFFQAFTKNG 103
>pdb|2L57|A Chain A, Solution Structure Of An Uncharacterized Thioredoin-Like
Protein From Clostridium Perfringens
Length = 126
Score = 31.2 bits (69), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Query: 94 GSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSI--ATRYGIRSIP- 150
G P ++ F C C + + +SK+ GK Y +E +I A +Y +P
Sbjct: 26 GIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDANIVPT 85
Query: 151 TVMIFKNGEKKDTVIGAVPKSTLTT 175
TV + K G K G + K+ + T
Sbjct: 86 TVFLDKEGNKFYVHQGLMRKNNIET 110
>pdb|3H79|A Chain A, Crystal Structure Of Trypanosoma Cruzi Thioredoxin-like
Hypothetical Protein Q4dv70
Length = 127
Score = 30.8 bits (68), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 83 DATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGK-----LKCYKVNTDES 137
D T+ S+V+D V V ++ PW + D+LS K +++ ++
Sbjct: 22 DETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKY 81
Query: 138 PSIATRYGIRSIPTVMIFKNGEKKD 162
P + R + PT+ + +K++
Sbjct: 82 PDVIERMRVSGFPTMRYYTRIDKQE 106
>pdb|4EUY|A Chain A, Crystal Structure Of Thioredoxin-Like Protein Bce_0499
From Bacillus Cereus Atcc 10987
Length = 105
Score = 30.8 bits (68), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 79 TAVEDATWQSLVLDSGSPVLVEFWAPWCGPC----RMIHPIIDELSKQYVGKLKCYKVNT 134
T E AT+ ++ VL+ CG C R ++ +++ + YV K++ +
Sbjct: 7 TIEELATY----IEEQQLVLLFIKTENCGVCDVXLRKVNYVLE--NYNYVEKIE---ILL 57
Query: 135 DESPSIATRYGIRSIPTVMIFKNGEK 160
+ IA RY + + PTV++F NG++
Sbjct: 58 QDXQEIAGRYAVFTGPTVLLFYNGKE 83
>pdb|2LS5|A Chain A, Solution Structure Of A Putative Protein Disulfide
Isomerase From Bacteroides Thetaiotaomicron
Length = 159
Score = 30.4 bits (67), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 94 GSPVLVEFWAPWCGPCRMIHPIIDE 118
G V+++F A WCG CR P I++
Sbjct: 33 GKVVMLQFTASWCGVCRKEMPFIEK 57
>pdb|3S9F|A Chain A, The Structure Of Tryparedoxin I From Leishmania Major
Length = 165
Score = 30.0 bits (66), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 37/98 (37%), Gaps = 27/98 (27%)
Query: 93 SGSPVLVEFWAPWCGPCRMIHPIIDELSKQ-----------------------YVGKLKC 129
SG V F A WC PCR P + E ++ Y K+
Sbjct: 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPW 106
Query: 130 YKV---NTDESPSIATRYGIRSIPTVMIFKNGEKKDTV 164
+ N + ++ +Y + SIPT +I N + DTV
Sbjct: 107 LSIPFANRNIVEALTKKYSVESIPT-LIGLNADTGDTV 143
>pdb|2H19|A Chain A, Crystal Structure Of Resa Cys77ala Variant
pdb|2H19|B Chain B, Crystal Structure Of Resa Cys77ala Variant
Length = 143
Score = 30.0 bits (66), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
Query: 74 CEAQETAVEDATWQSLVLDS--GSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGK-LKCY 130
+A +ED + + L G V + FW WC P + P + K + + ++
Sbjct: 4 SDAPNFVLEDTNGKRIELSDLKGKGVFLNFWGTWCEPAKKEFPYMANQYKHFKSQGVEIV 63
Query: 131 KVNTDES----PSIATRYGIRSIPTVM 153
VN ES + YG+ + P V+
Sbjct: 64 AVNVGESKIAVHNFMKSYGV-NFPVVL 89
>pdb|2H1A|A Chain A, Resa C74a Variant
pdb|2H1A|B Chain B, Resa C74a Variant
Length = 143
Score = 30.0 bits (66), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
Query: 74 CEAQETAVEDATWQSLVLDS--GSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGK-LKCY 130
+A +ED + + L G V + FW W PC+ P + K + + ++
Sbjct: 4 SDAPNFVLEDTNGKRIELSDLKGKGVFLNFWGTWAEPCKKEFPYMANQYKHFKSQGVEIV 63
Query: 131 KVNTDES----PSIATRYGIRSIPTVM 153
VN ES + YG+ + P V+
Sbjct: 64 AVNVGESKIAVHNFMKSYGV-NFPVVL 89
>pdb|2B5X|A Chain A, Solution Structure Of A Thioredoxin-Like Protein In The
Reduced Form
pdb|2B5Y|A Chain A, Solution Structure Of A Thioredoxin-Like Protein In The
Oxidized Form
Length = 148
Score = 30.0 bits (66), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 96 PVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVN 133
P L+ FW+ C C+ P ++E +Y +L V+
Sbjct: 31 PTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVH 68
>pdb|3C73|A Chain A, Structure Of Cehc Variant Resa
pdb|3C73|B Chain B, Structure Of Cehc Variant Resa
Length = 140
Score = 30.0 bits (66), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 8/86 (9%)
Query: 75 EAQETAVEDATWQSLVLDS--GSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGK-LKCYK 131
+A +ED + + L G V + FW WC C+ P + K + + ++
Sbjct: 2 DAPNFVLEDTNGKRIELSDLKGKGVFLNFWGTWCEHCKKEFPYMANQYKHFKSQGVEIVA 61
Query: 132 VNTDES----PSIATRYGIRSIPTVM 153
VN ES + YG+ + P V+
Sbjct: 62 VNVGESKIAVHNFMKSYGV-NFPVVL 86
>pdb|3C71|A Chain A, Struture Of A Resa Variant With A Dsba-Like Active Site
Motif (Cphc)
Length = 143
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 8/86 (9%)
Query: 75 EAQETAVEDATWQSLVLDS--GSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGK-LKCYK 131
+A +ED + + L G V + FW WC C+ P + K + + ++
Sbjct: 5 DAPNFVLEDTNGKRIELSDLKGKGVFLNFWGTWCPHCKKEFPYMANQYKHFKSQGVEIVA 64
Query: 132 VNTDES----PSIATRYGIRSIPTVM 153
VN ES + YG+ + P V+
Sbjct: 65 VNVGESKIAVHNFMKSYGV-NFPVVL 89
>pdb|3FKF|A Chain A, Thiol-Disulfide Oxidoreductase From Bacteroides Fragilis
Nctc 9343
pdb|3FKF|B Chain B, Thiol-Disulfide Oxidoreductase From Bacteroides Fragilis
Nctc 9343
pdb|3FKF|C Chain C, Thiol-Disulfide Oxidoreductase From Bacteroides Fragilis
Nctc 9343
pdb|3FKF|D Chain D, Thiol-Disulfide Oxidoreductase From Bacteroides Fragilis
Nctc 9343
Length = 148
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 97 VLVEFWAPWCGPCRMIHPIIDELSKQY 123
+L+ FWA WC P + + L+K+Y
Sbjct: 36 LLLNFWASWCDPQPEANAELKRLNKEY 62
>pdb|1O6J|A Chain A, Tryparedoxin Ii From C.Fasciculata Solved By Sulphur
Phasing
pdb|1O6J|B Chain B, Tryparedoxin Ii From C.Fasciculata Solved By Sulphur
Phasing
Length = 150
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 93 SGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGK--LKCYKVNTDES 137
+G V F A WC PCR P + + K + K + ++ DES
Sbjct: 28 AGKTVFFYFSASWCPPCRAFTPQLIDFYKAHAEKKNFEVMLISWDES 74
>pdb|1FG4|A Chain A, Structure Of Tryparedoxin Ii
pdb|1FG4|B Chain B, Structure Of Tryparedoxin Ii
Length = 149
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 93 SGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGK--LKCYKVNTDES 137
+G V F A WC PCR P + + K + K + ++ DES
Sbjct: 27 AGKTVFFYFSASWCPPCRAFTPQLIDFYKAHAEKKNFEVMLISWDES 73
>pdb|1O81|A Chain A, Tryparedoxin Ii From C.fasciculata Solved By Sulphur
Phasing
pdb|1O81|B Chain B, Tryparedoxin Ii From C.fasciculata Solved By Sulphur
Phasing
pdb|1OC9|B Chain B, Tryparedoxin Ii From C.Fasciculata Solved By Mr
pdb|1OC8|A Chain A, Tryparedoxin Ii From C.Fasciculata Solved By Mr
pdb|1OC8|B Chain B, Tryparedoxin Ii From C.Fasciculata Solved By Mr
Length = 152
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 93 SGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGK--LKCYKVNTDES 137
+G V F A WC PCR P + + K + K + ++ DES
Sbjct: 30 AGKTVFFYFSASWCPPCRAFTPQLIDFYKAHAEKKNFEVMLISWDES 76
>pdb|1LU4|A Chain A, 1.1 Angstrom Resolution Crystal Structure Of A Secreted
Mycobacterium Tuberculosis Disulfide Oxidoreductase
Homologous To E. Coli Dsbe: Implications For Functions
Length = 136
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 14/79 (17%)
Query: 94 GSPVLVEFWAPWCGPCRMIHPIIDELSKQ-----YVGKLKCYKVNTDESPSIATRYGIRS 148
G P ++ FW PWC C P + +++ +VG + + S ++Y +
Sbjct: 24 GKPAVLWFWTPWCPFCNAEAPSLSQVAAANPAVTFVGIAT--RADVGAMQSFVSKYNLN- 80
Query: 149 IPTVMIFKNGEKKDTVIGA 167
F N D VI A
Sbjct: 81 ------FTNLNDADGVIWA 93
>pdb|3ERW|A Chain A, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|B Chain B, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|C Chain C, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|D Chain D, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|E Chain E, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|F Chain F, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|G Chain G, Crystal Structure Of Stoa From Bacillus Subtilis
Length = 145
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 35/89 (39%), Gaps = 7/89 (7%)
Query: 92 DSGSPVLVEFWAPWCGPCRMIHP----IIDELSKQYVGKLKCYKVNTDESPSIATRY--- 144
+ G ++ FW WC PC+ P D V + VN++++ + +
Sbjct: 32 NKGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKA 91
Query: 145 GIRSIPTVMIFKNGEKKDTVIGAVPKSTL 173
+ P V+ K K+ I +P S L
Sbjct: 92 NKLTFPIVLDSKGELXKEYHIITIPTSFL 120
>pdb|2H30|A Chain A, Crystal Structure Of The N-Terminal Domain Of Pilb From
Neisseria Gonorrhoeae
Length = 164
Score = 28.5 bits (62), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 40/111 (36%), Gaps = 30/111 (27%)
Query: 88 SLVLDSGSPVLVEFWAPWCGPC---------------------------RMIHPIID-EL 119
S+ L P L++FWA WC C +H D E
Sbjct: 32 SVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEF 91
Query: 120 SKQYVG-KLKCYKVNTDESPSIATRYGIRSIPT-VMIFKNGEKKDTVIGAV 168
K Y G V TD +IA I P+ +I K+G+ + V G++
Sbjct: 92 QKWYAGLNYPKLPVVTDNGGTIAQNLNISVYPSWALIGKDGDVQRIVKGSI 142
>pdb|2K8V|A Chain A, Solution Structure Of Oxidised Erp18
Length = 157
Score = 28.5 bits (62), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 6/38 (15%)
Query: 93 SGSPVLVEFWAPWCGPCRMIHPI------IDELSKQYV 124
SG P++V WCG C+ + P I ELS +V
Sbjct: 38 SGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFV 75
>pdb|1SEN|A Chain A, Endoplasmic Reticulum Protein Rp19 O95881
Length = 164
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 6/38 (15%)
Query: 93 SGSPVLVEFWAPWCGPCRMIHPI------IDELSKQYV 124
SG P++V WCG C+ + P I ELS +V
Sbjct: 45 SGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFV 82
>pdb|2LUS|A Chain A, Nmr Structure Of Carcinoscorpius Rotundicauda Thioredoxin
Related Protein 16 And Its Role In Regulating
Transcription Factor Nf-Kb Activity
Length = 143
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 33/84 (39%), Gaps = 28/84 (33%)
Query: 101 FWAPWCGPCRMIHPIIDELSKQYVGKLKCYK---VNTDES-------------------- 137
F A WC PCR PI+ ++ + V ++ V++D S
Sbjct: 33 FSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPY 92
Query: 138 -----PSIATRYGIRSIPTVMIFK 156
++ +YGI IP ++I K
Sbjct: 93 RSGPASNVTAKYGITGIPALVIVK 116
>pdb|2JZR|A Chain A, Solution Structure Of The Oxidized Form (Cys67-Cys70) Of
The N-Terminal Domain Of Pilb From N. Meningitidis.
pdb|2JZS|A Chain A, Solution Structure Of The Reduced Form Of The N-Terminal
Domain Of Pilb From N. Meningitidis.
pdb|2K9F|A Chain A, Structural Features Of The Complex Between The Dsbd N-
Terminal And The Pilb N-Terminal Domains From Neisseria
Meningitidis
Length = 144
Score = 28.1 bits (61), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 88 SLVLDSGSPVLVEFWAPWCGPC 109
S+ L P L++FWA WC C
Sbjct: 18 SVYLKKDKPTLIKFWASWCPLC 39
>pdb|2FY6|A Chain A, Structure Of The N-Terminal Domain Of Neisseria
Meningitidis Pilb
Length = 143
Score = 28.1 bits (61), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 88 SLVLDSGSPVLVEFWAPWCGPC 109
S+ L P L++FWA WC C
Sbjct: 17 SVYLKKDKPTLIKFWASWCPLC 38
>pdb|1OC9|A Chain A, Tryparedoxin Ii From C.Fasciculata Solved By Mr
Length = 152
Score = 27.7 bits (60), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 93 SGSPVLVEFWAPWCGPCRMIHPIIDELSKQYV 124
+G V F A WC PCR P + + K +
Sbjct: 30 AGKTVFFYFSASWCPPCRAFTPQLIDFYKAHA 61
>pdb|3OR5|A Chain A, Crystal Structure Of Thiol:disulfide Interchange Protein,
Thioredoxin Family Protein From Chlorobium Tepidum Tls
Length = 165
Score = 27.3 bits (59), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 94 GSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGK 126
G +V F+A WC PCR P ++ K + +
Sbjct: 34 GKAYIVNFFATWCPPCRSEIPDXVQVQKTWASR 66
>pdb|1FCD|C Chain C, The Structure Of Flavocytochrome C Sulfide Dehydrogenase
From A Purple Phototrophic Bacterium Chromatium Vinosum
At 2.5 Angstroms Resolution
pdb|1FCD|D Chain D, The Structure Of Flavocytochrome C Sulfide Dehydrogenase
From A Purple Phototrophic Bacterium Chromatium Vinosum
At 2.5 Angstroms Resolution
Length = 174
Score = 26.9 bits (58), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 137 SPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEK 179
SPSIA + + + FK+GE T++G + K T EK
Sbjct: 26 SPSIAQMDPMVFVEVMEGFKSGEIASTIMGRIAKGYSTADFEK 68
>pdb|2XBU|A Chain A, Saccharomyces Cerevisiae Hypoxanthine-Guanine
Phosphoribosyltransferase In Complex With Gmp
(Monoclinic Crystal Form)
pdb|2XBU|B Chain B, Saccharomyces Cerevisiae Hypoxanthine-Guanine
Phosphoribosyltransferase In Complex With Gmp
(Monoclinic Crystal Form)
Length = 221
Score = 26.9 bits (58), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 112 IHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGI 146
+H + EL K + K ++T++SP + T +GI
Sbjct: 119 LHYALSELEKDAAEQAKAKGIDTEKSPEMKTNFGI 153
>pdb|2JKY|A Chain A, Saccharomyces Cerevisiae Hypoxanthine-Guanine
Phosphoribosyltransferase In Complex With Gmp (Guanosine
5' -Monophosphate) (Tetragonal Crystal Form)
pdb|2JKY|B Chain B, Saccharomyces Cerevisiae Hypoxanthine-Guanine
Phosphoribosyltransferase In Complex With Gmp (Guanosine
5' -Monophosphate) (Tetragonal Crystal Form)
Length = 213
Score = 26.9 bits (58), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 112 IHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGI 146
+H + EL K + K ++T++SP + T +GI
Sbjct: 118 LHYALSELEKDAAEQAKAKGIDTEKSPEMKTNFGI 152
>pdb|2JKZ|A Chain A, Saccharomyces Cerevisiae Hypoxanthine-Guanine
Phosphoribosyltransferase In Complex With Gmp (Guanosine
5' -Monophosphate) (Orthorhombic Crystal Form)
pdb|2JKZ|B Chain B, Saccharomyces Cerevisiae Hypoxanthine-Guanine
Phosphoribosyltransferase In Complex With Gmp (Guanosine
5' -Monophosphate) (Orthorhombic Crystal Form)
pdb|2JKZ|C Chain C, Saccharomyces Cerevisiae Hypoxanthine-Guanine
Phosphoribosyltransferase In Complex With Gmp (Guanosine
5' -Monophosphate) (Orthorhombic Crystal Form)
pdb|2JKZ|D Chain D, Saccharomyces Cerevisiae Hypoxanthine-Guanine
Phosphoribosyltransferase In Complex With Gmp (Guanosine
5' -Monophosphate) (Orthorhombic Crystal Form)
Length = 220
Score = 26.9 bits (58), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 112 IHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGI 146
+H + EL K + K ++T++SP + T +GI
Sbjct: 118 LHYALSELEKDAAEQAKAKGIDTEKSPEMKTNFGI 152
>pdb|3EMX|A Chain A, Crystal Structure Of Thioredoxin From Aeropyrum Pernix
pdb|3EMX|B Chain B, Crystal Structure Of Thioredoxin From Aeropyrum Pernix
Length = 135
Score = 26.6 bits (57), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 142 TRYGIRSIPTVMIFKNGEKKDTVIGAVPKS 171
+ G+ PT++ +K G D ++GA P S
Sbjct: 86 NKAGVEGTPTLVFYKEGRIVDKLVGATPWS 115
>pdb|3LWA|A Chain A, The Crystal Structure Of A Secreted Thiol-Disulfide
Isomerase From Corynebacterium Glutamicum To 1.75a
Length = 183
Score = 26.6 bits (57), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 34/95 (35%), Gaps = 19/95 (20%)
Query: 97 VLVEFWAPWCGPCRM----IHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTV 152
V++ W WC PCR + I +EL G V I R R I
Sbjct: 62 VILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTV-----LGINVRDYSRDIAQD 116
Query: 153 MIFKNGEKKDTV----------IGAVPKSTLTTSI 177
+ NG ++ +G VP S + T+I
Sbjct: 117 FVTDNGLDYPSIYDPPFXTAASLGGVPASVIPTTI 151
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,011,493
Number of Sequences: 62578
Number of extensions: 138768
Number of successful extensions: 528
Number of sequences better than 100.0: 209
Number of HSP's better than 100.0 without gapping: 197
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 266
Number of HSP's gapped (non-prelim): 216
length of query: 181
length of database: 14,973,337
effective HSP length: 93
effective length of query: 88
effective length of database: 9,153,583
effective search space: 805515304
effective search space used: 805515304
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 48 (23.1 bits)