BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030225
(181 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P31583|RHN1_NICPL Ras-related protein RHN1 OS=Nicotiana plumbaginifolia GN=RHN1 PE=2
SV=1
Length = 200
Score = 266 bits (681), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 123/182 (67%), Positives = 146/182 (80%), Gaps = 1/182 (0%)
Query: 1 MGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPM 60
MG GK+SLV+RFVKGQF +FQESTIGAAFF+ L++N T+KF+IWDTAGQERYHSLAPM
Sbjct: 19 MGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTLAVNNATVKFEIWDTAGQERYHSLAPM 78
Query: 61 YYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEG 120
YYRGAAAA++VYDITS DSF RAKKWVQELQ+QGNPN++M L NK DLE++RKV EE
Sbjct: 79 YYRGAAAAIIVYDITSSDSFARAKKWVQELQKQGNPNMVMALAGNKADLEDRRKVTAEEA 138
Query: 121 ELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPSRQ-TGMKLHTESHGGGRRGFC 179
LYA+ENGL F+ETSAK+A NVN +FYEIAKRL P++ GM L + G R C
Sbjct: 139 RLYAEENGLFFMETSAKTAVNVNAIFYEIAKRLPRAQPAQNPAGMVLVDRAAEGTRATSC 198
Query: 180 CS 181
C+
Sbjct: 199 CT 200
>sp|P29687|RAB5_TOBAC Ras-related protein Rab5 OS=Nicotiana tabacum GN=RAB5 PE=2 SV=1
Length = 200
Score = 265 bits (678), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 121/182 (66%), Positives = 146/182 (80%), Gaps = 1/182 (0%)
Query: 1 MGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPM 60
MG GK+SLV+RFVKGQF +FQESTIGAAFF+ +S+N T+KF+IWDTAGQERYHSLAPM
Sbjct: 19 MGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTVSVNNATVKFEIWDTAGQERYHSLAPM 78
Query: 61 YYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEG 120
YYRGAAAA++VYDITS +S RAKKWVQELQ+QGNPN++M L NK DLE+KRKV EE
Sbjct: 79 YYRGAAAAIIVYDITSTESLARAKKWVQELQKQGNPNMVMALAGNKADLEDKRKVTAEEA 138
Query: 121 ELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPSRQ-TGMKLHTESHGGGRRGFC 179
LYA+ENGL F+ETSAK+A NVN++FYEIAKRL P++ GM L + G + C
Sbjct: 139 RLYAEENGLFFMETSAKTATNVNDIFYEIAKRLPRAQPAQNPAGMVLEDKPAQGSQAASC 198
Query: 180 CS 181
C+
Sbjct: 199 CT 200
>sp|P31582|RAF2A_ARATH Ras-related protein RABF2a OS=Arabidopsis thaliana GN=RABF2A PE=1
SV=1
Length = 200
Score = 254 bits (650), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 119/182 (65%), Positives = 142/182 (78%), Gaps = 1/182 (0%)
Query: 1 MGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPM 60
+G GK+SLVLRFVK QF +FQESTIGAAFF+Q L++N+ T+KF+IWDTAGQERYHSLAPM
Sbjct: 19 VGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPM 78
Query: 61 YYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEG 120
YYRGAAAA++V+DIT+ SFERAKKWVQELQ QGNPN++M L NK DL + RKV EE
Sbjct: 79 YYRGAAAAIIVFDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVSAEEA 138
Query: 121 ELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPSRQ-TGMKLHTESHGGGRRGFC 179
E+YAQEN L F+ETSAK+A NV ++FYEIAKRL V P+ TGM L C
Sbjct: 139 EIYAQENSLFFMETSAKTATNVKDIFYEIAKRLPRVQPAENPTGMVLPNGPGATAVSSSC 198
Query: 180 CS 181
C+
Sbjct: 199 CA 200
>sp|Q9SN68|RAF2B_ARATH Ras-related protein RABF2b OS=Arabidopsis thaliana GN=RABF2B PE=1
SV=1
Length = 200
Score = 253 bits (645), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 117/182 (64%), Positives = 143/182 (78%), Gaps = 1/182 (0%)
Query: 1 MGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPM 60
+G GK+SLVLRFVK QF +FQESTIGAAFF+Q L++N+ T+KF+IWDTAGQERYHSLAPM
Sbjct: 19 VGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPM 78
Query: 61 YYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEG 120
YYRGAAAA++V+D+T+ SFERAKKWVQELQ QGNPN++M L NK DL + RKV E+
Sbjct: 79 YYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDARKVTAEDA 138
Query: 121 ELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPSRQ-TGMKLHTESHGGGRRGFC 179
+ YAQENGL F+ETSAK+A NV E+FYEIA+RL V P+ TGM L + C
Sbjct: 139 QTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTENPTGMVLPDRAMDRAVSSSC 198
Query: 180 CS 181
C+
Sbjct: 199 CA 200
>sp|Q86JP3|RAB5A_DICDI Ras-related protein Rab-5A OS=Dictyostelium discoideum GN=rab5A
PE=3 SV=1
Length = 201
Score = 235 bits (600), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 109/183 (59%), Positives = 140/183 (76%), Gaps = 3/183 (1%)
Query: 2 GTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMY 61
GK+SLVLRFV+G F D+QESTIGAAF Q + LN+ T+KF+IWDTAGQERYH+LAPMY
Sbjct: 19 AVGKSSLVLRFVRGHFLDYQESTIGAAFLAQTVCLNDTTVKFEIWDTAGQERYHTLAPMY 78
Query: 62 YRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEGE 121
YRGA AA+VVYDI S DSFERA KWV+ELQRQG+PN+++ L NK+DL KRKV+ E +
Sbjct: 79 YRGAQAAIVVYDIRSEDSFERAIKWVKELQRQGSPNIVIALAGNKLDLAAKRKVETAEAQ 138
Query: 122 LYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPSRQTGMKL---HTESHGGGRRGF 178
YA+ENGL F+ETSAK++ NVNELF EIAK+L + +R ++ ++ G++
Sbjct: 139 QYAEENGLLFMETSAKTSQNVNELFVEIAKKLPKTPTTRPGSGRVAIAPIDNGNTGKKNK 198
Query: 179 CCS 181
CC+
Sbjct: 199 CCN 201
>sp|P51147|RAB5C_CANFA Ras-related protein Rab-5C OS=Canis familiaris GN=RAB5C PE=2 SV=1
Length = 216
Score = 230 bits (586), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 111/187 (59%), Positives = 136/187 (72%), Gaps = 9/187 (4%)
Query: 2 GTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMY 61
GK+SLVLRFVKGQF ++QESTIGAAF TQ + L++ T+KF+IWDTAGQERYHSLAPMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 62 YRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEGE 121
YRGA AA+VVYDIT+ D+F RAK WV+ELQRQ +PN+++ L NK DL KR V+ +E +
Sbjct: 91 YRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQ 150
Query: 122 LYAQENGLSFLETSAKSAHNVNELFYEIAKRL-------AEVNPSRQTGMKLHTESHGGG 174
YA +N L F+ETSAK+A NVNE+F IAK+L A PSR G+ L S
Sbjct: 151 AYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPSRNRGVDLQENSPAS- 209
Query: 175 RRGFCCS 181
R CCS
Sbjct: 210 -RSQCCS 215
>sp|Q5R7L7|RAB5C_PONAB Ras-related protein Rab-5C OS=Pongo abelii GN=RAB5C PE=2 SV=1
Length = 216
Score = 229 bits (584), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 107/183 (58%), Positives = 135/183 (73%), Gaps = 5/183 (2%)
Query: 4 GKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMYYR 63
GK+SLVLRFVKGQF ++QESTIGAAF TQ + L++ T+KF+IWDTAGQERYHSLAPMYYR
Sbjct: 33 GKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYR 92
Query: 64 GAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEGELY 123
GA AA+VVYDIT+ D+F RAK WV+ELQRQ +PN+++ L NK DL KR V+ +E + Y
Sbjct: 93 GAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAY 152
Query: 124 AQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPSRQTGMK-----LHTESHGGGRRGF 178
A +N L F+ETSAK+A NVNE+F IAK+L + P TG + + + R
Sbjct: 153 ADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNRGVDLQENNPASRSQ 212
Query: 179 CCS 181
CCS
Sbjct: 213 CCS 215
>sp|P51148|RAB5C_HUMAN Ras-related protein Rab-5C OS=Homo sapiens GN=RAB5C PE=1 SV=2
Length = 216
Score = 229 bits (584), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 107/183 (58%), Positives = 135/183 (73%), Gaps = 5/183 (2%)
Query: 4 GKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMYYR 63
GK+SLVLRFVKGQF ++QESTIGAAF TQ + L++ T+KF+IWDTAGQERYHSLAPMYYR
Sbjct: 33 GKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYR 92
Query: 64 GAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEGELY 123
GA AA+VVYDIT+ D+F RAK WV+ELQRQ +PN+++ L NK DL KR V+ +E + Y
Sbjct: 93 GAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAY 152
Query: 124 AQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPSRQTGMK-----LHTESHGGGRRGF 178
A +N L F+ETSAK+A NVNE+F IAK+L + P TG + + + R
Sbjct: 153 ADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNRGVDLQENNPASRSQ 212
Query: 179 CCS 181
CCS
Sbjct: 213 CCS 215
>sp|Q58DS9|RAB5C_BOVIN Ras-related protein Rab-5C OS=Bos taurus GN=RAB5C PE=2 SV=1
Length = 216
Score = 228 bits (581), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 106/185 (57%), Positives = 135/185 (72%), Gaps = 5/185 (2%)
Query: 2 GTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMY 61
GK+SLVLRFVKGQF ++QESTIGAAF TQ + L++ T+KF+IWDTAGQERYHSLAPMY
Sbjct: 31 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 90
Query: 62 YRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEGE 121
YRGA AA+VVYDIT+ D+F RAK WV+ELQRQ +PN+++ L NK DL KR V+ +E +
Sbjct: 91 YRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQ 150
Query: 122 LYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPSRQTGMK-----LHTESHGGGRR 176
YA++N L F+ETSAK+A NVNE+F IAK+L + P G + + + R
Sbjct: 151 AYAEDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPGRNRGVDLQENNPASR 210
Query: 177 GFCCS 181
CCS
Sbjct: 211 SQCCS 215
>sp|P35278|RAB5C_MOUSE Ras-related protein Rab-5C OS=Mus musculus GN=Rab5c PE=1 SV=2
Length = 216
Score = 228 bits (580), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 107/183 (58%), Positives = 133/183 (72%), Gaps = 5/183 (2%)
Query: 4 GKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMYYR 63
GK+SLVLRFVKGQF ++QESTIGAAF TQ + L++ T+KF+IWDTAGQERYHSLAPMYYR
Sbjct: 33 GKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYR 92
Query: 64 GAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEGELY 123
GA AA+VVYDIT+ D+F RAK WV+ELQRQ +PN+++ L NK DL KR V+ +E + Y
Sbjct: 93 GAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAY 152
Query: 124 AQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPSRQTGMKLHT-----ESHGGGRRGF 178
A +N L F+ETSAK+A NVNE+F IAK+L + P G T + R
Sbjct: 153 ADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPGRTRGVDLQESNPASRSQ 212
Query: 179 CCS 181
CCS
Sbjct: 213 CCS 215
>sp|Q5RBG1|RAB5B_PONAB Ras-related protein Rab-5B OS=Pongo abelii GN=RAB5B PE=2 SV=1
Length = 215
Score = 227 bits (578), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 108/187 (57%), Positives = 137/187 (73%), Gaps = 9/187 (4%)
Query: 2 GTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMY 61
GK+SLVLRFVKGQF ++QESTIGAAF TQ + L++ T+KF+IWDTAGQERYHSLAPMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 62 YRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEGE 121
YRGA AA+VVYDIT+ ++F RAK WV+ELQRQ +P++++ L NK DL KR V+ EE +
Sbjct: 90 YRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQ 149
Query: 122 LYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPS-------RQTGMKLHTESHGGG 174
YA +N L F+ETSAK+A NVN+LF IAK+L + P R G+ LH +S
Sbjct: 150 AYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGVDLHEQSQQN- 208
Query: 175 RRGFCCS 181
+ CCS
Sbjct: 209 -KSQCCS 214
>sp|P61021|RAB5B_MOUSE Ras-related protein Rab-5B OS=Mus musculus GN=Rab5b PE=1 SV=1
Length = 215
Score = 227 bits (578), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 108/187 (57%), Positives = 137/187 (73%), Gaps = 9/187 (4%)
Query: 2 GTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMY 61
GK+SLVLRFVKGQF ++QESTIGAAF TQ + L++ T+KF+IWDTAGQERYHSLAPMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 62 YRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEGE 121
YRGA AA+VVYDIT+ ++F RAK WV+ELQRQ +P++++ L NK DL KR V+ EE +
Sbjct: 90 YRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQ 149
Query: 122 LYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPS-------RQTGMKLHTESHGGG 174
YA +N L F+ETSAK+A NVN+LF IAK+L + P R G+ LH +S
Sbjct: 150 AYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGVDLHEQSQQN- 208
Query: 175 RRGFCCS 181
+ CCS
Sbjct: 209 -KSQCCS 214
>sp|P61020|RAB5B_HUMAN Ras-related protein Rab-5B OS=Homo sapiens GN=RAB5B PE=1 SV=1
Length = 215
Score = 227 bits (578), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 108/187 (57%), Positives = 137/187 (73%), Gaps = 9/187 (4%)
Query: 2 GTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMY 61
GK+SLVLRFVKGQF ++QESTIGAAF TQ + L++ T+KF+IWDTAGQERYHSLAPMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 62 YRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEGE 121
YRGA AA+VVYDIT+ ++F RAK WV+ELQRQ +P++++ L NK DL KR V+ EE +
Sbjct: 90 YRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQ 149
Query: 122 LYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPS-------RQTGMKLHTESHGGG 174
YA +N L F+ETSAK+A NVN+LF IAK+L + P R G+ LH +S
Sbjct: 150 AYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNLGGAAGRSRGVDLHEQSQQN- 208
Query: 175 RRGFCCS 181
+ CCS
Sbjct: 209 -KSQCCS 214
>sp|Q5ZHW4|RAB5B_CHICK Ras-related protein Rab-5B OS=Gallus gallus GN=RAB5B PE=2 SV=1
Length = 215
Score = 226 bits (577), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 107/187 (57%), Positives = 137/187 (73%), Gaps = 9/187 (4%)
Query: 2 GTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMY 61
GK+SLVLRFVKGQF ++QESTIGAAF TQ + L++ T+KF+IWDTAGQERYHSLAPMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 62 YRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEGE 121
YRGA AA+VVYDIT+ ++F RAK WV+ELQRQ +P++++ L NK DL KR V+ EE +
Sbjct: 90 YRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLASKRMVEYEEAQ 149
Query: 122 LYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPS-------RQTGMKLHTESHGGG 174
YA +N L F+ETSAK+A NVN+LF IAK+L + P R G+ LH ++
Sbjct: 150 AYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQSTSGAAGRSRGVDLHEQTQQN- 208
Query: 175 RRGFCCS 181
+ CCS
Sbjct: 209 -KSQCCS 214
>sp|Q98932|RAB5C_CHICK Ras-related protein Rab-5C OS=Gallus gallus GN=RAB5C PE=1 SV=1
Length = 216
Score = 223 bits (568), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 107/185 (57%), Positives = 133/185 (71%), Gaps = 9/185 (4%)
Query: 4 GKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMYYR 63
GK+SLVLRFVKGQF ++QESTIGAAF TQ + L++ T+KF+IWDTAGQERYHSLAPMYYR
Sbjct: 33 GKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYR 92
Query: 64 GAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEGELY 123
GA AA+VVYDIT+ D+F RAK WV+ELQRQ +PN+++ L NK DL KR V ++ + Y
Sbjct: 93 GAQAAIVVYDITNTDTFVRAKNWVKELQRQASPNIVIALAGNKADLATKRAVDFQDAQTY 152
Query: 124 AQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPSRQTG-------MKLHTESHGGGRR 176
A +N L F+ETSAK+A NVNE+F IAK+L + P G + L S R
Sbjct: 153 ADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAPGGPGRNRVVDLQESSQPS--R 210
Query: 177 GFCCS 181
CCS
Sbjct: 211 SQCCS 215
>sp|Q9CQD1|RAB5A_MOUSE Ras-related protein Rab-5A OS=Mus musculus GN=Rab5a PE=1 SV=1
Length = 215
Score = 222 bits (566), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 108/187 (57%), Positives = 135/187 (72%), Gaps = 9/187 (4%)
Query: 2 GTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMY 61
GK+SLVLRFVKGQF +FQESTIGAAF TQ + L++ T+KF+IWDTAGQERYHSLAPMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 62 YRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEGE 121
YRGA AA+VVYDIT+ +SF RAK WV+ELQRQ +PN+++ L NK DL KR V +E +
Sbjct: 90 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQ 149
Query: 122 LYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNP-------SRQTGMKLHTESHGGG 174
YA +N L F+ETSAK++ NVNE+F IAK+L + P +R G+ L +
Sbjct: 150 SYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVDLTEPAQPA- 208
Query: 175 RRGFCCS 181
R CCS
Sbjct: 209 -RSQCCS 214
>sp|Q06AU6|RAB5A_PIG Ras-related protein Rab-5A OS=Sus scrofa GN=RAB5A PE=2 SV=1
Length = 215
Score = 222 bits (566), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 108/187 (57%), Positives = 136/187 (72%), Gaps = 9/187 (4%)
Query: 2 GTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMY 61
GK+SLVLRFVKGQF +FQESTIGAAF TQ + L++ T+KF+IWDTAGQERYHSLAPMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 62 YRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEGE 121
YRGA AA+VVYDIT+ +SF RAK WV+ELQRQ +PN+++ L NK DL KR V +E +
Sbjct: 90 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQ 149
Query: 122 LYAQENGLSFLETSAKSAHNVNELFYEIAKRLAE-------VNPSRQTGMKLHTESHGGG 174
YA +N L F+ETSAK++ NVNE+F IAK+L + +N +R G+ L +
Sbjct: 150 SYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGINCTRGRGVDLTEPTQ--P 207
Query: 175 RRGFCCS 181
R CCS
Sbjct: 208 TRSQCCS 214
>sp|Q0IIG7|RAB5A_BOVIN Ras-related protein Rab-5A OS=Bos taurus GN=RAB5A PE=2 SV=1
Length = 215
Score = 222 bits (565), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/185 (58%), Positives = 135/185 (72%), Gaps = 9/185 (4%)
Query: 4 GKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMYYR 63
GK+SLVLRFVKGQF +FQESTIGAAF TQ + L++ T+KF+IWDTAGQERYHSLAPMYYR
Sbjct: 32 GKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYR 91
Query: 64 GAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEGELY 123
GA AA+VVYDIT+ +SF RAK WV+ELQRQ +PN+++ L NK DL KR V +E + Y
Sbjct: 92 GAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSY 151
Query: 124 AQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNP-------SRQTGMKLHTESHGGGRR 176
A +N L F+ETSAK++ NVNE+F IAK+L + P +R G+ L + R
Sbjct: 152 ADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSTRGRGVDLTEPTQ--PTR 209
Query: 177 GFCCS 181
CCS
Sbjct: 210 SQCCS 214
>sp|P61271|RAB5A_MACFA Ras-related protein Rab-5A OS=Macaca fascicularis GN=RAB5A PE=2
SV=1
Length = 215
Score = 222 bits (565), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/187 (57%), Positives = 135/187 (72%), Gaps = 9/187 (4%)
Query: 2 GTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMY 61
GK+SLVLRFVKGQF +FQESTIGAAF TQ + L++ T+KF+IWDTAGQERYHSLAPMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 62 YRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEGE 121
YRGA AA+VVYDIT+ +SF RAK WV+ELQRQ +PN+++ L NK DL KR V +E +
Sbjct: 90 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQ 149
Query: 122 LYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNP-------SRQTGMKLHTESHGGG 174
YA +N L F+ETSAK++ NVNE+F IAK+L + P +R G+ L +
Sbjct: 150 SYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVDLTEPTQ--P 207
Query: 175 RRGFCCS 181
R CCS
Sbjct: 208 TRSQCCS 214
>sp|P18066|RAB5A_CANFA Ras-related protein Rab-5A OS=Canis familiaris GN=RAB5A PE=1 SV=1
Length = 215
Score = 222 bits (565), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/187 (57%), Positives = 135/187 (72%), Gaps = 9/187 (4%)
Query: 2 GTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMY 61
GK+SLVLRFVKGQF +FQESTIGAAF TQ + L++ T+KF+IWDTAGQERYHSLAPMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 62 YRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEGE 121
YRGA AA+VVYDIT+ +SF RAK WV+ELQRQ +PN+++ L NK DL KR V +E +
Sbjct: 90 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQ 149
Query: 122 LYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNP-------SRQTGMKLHTESHGGG 174
YA +N L F+ETSAK++ NVNE+F IAK+L + P +R G+ L +
Sbjct: 150 SYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVDLTEPTQ--P 207
Query: 175 RRGFCCS 181
R CCS
Sbjct: 208 TRSQCCS 214
>sp|P20339|RAB5A_HUMAN Ras-related protein Rab-5A OS=Homo sapiens GN=RAB5A PE=1 SV=2
Length = 215
Score = 222 bits (565), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/187 (57%), Positives = 135/187 (72%), Gaps = 9/187 (4%)
Query: 2 GTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMY 61
GK+SLVLRFVKGQF +FQESTIGAAF TQ + L++ T+KF+IWDTAGQERYHSLAPMY
Sbjct: 30 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 89
Query: 62 YRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEGE 121
YRGA AA+VVYDIT+ +SF RAK WV+ELQRQ +PN+++ L NK DL KR V +E +
Sbjct: 90 YRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQ 149
Query: 122 LYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNP-------SRQTGMKLHTESHGGG 174
YA +N L F+ETSAK++ NVNE+F IAK+L + P +R G+ L +
Sbjct: 150 SYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVDLTEPTQ--P 207
Query: 175 RRGFCCS 181
R CCS
Sbjct: 208 TRNQCCS 214
>sp|Q9CB01|RABF1_ARATH Ras-related protein RABF1 OS=Arabidopsis thaliana GN=RABF1 PE=1
SV=1
Length = 202
Score = 199 bits (505), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 90/159 (56%), Positives = 124/159 (77%), Gaps = 1/159 (0%)
Query: 2 GTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNE-VTIKFDIWDTAGQERYHSLAPM 60
G GK+ +VLRFV+GQF + T+GA+F +Q ++L + T+KF+IWDTAGQERY +LAP+
Sbjct: 43 GVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYSALAPL 102
Query: 61 YYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEG 120
YYRGA AV+VYDITS +SF++A+ WV+ELQ+ G+P+++M LV NK DL EKR+V E+G
Sbjct: 103 YYRGAGVAVIVYDITSPESFKKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPTEDG 162
Query: 121 ELYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPS 159
A++NG+ F+ETSAK+A N+N+LF EI KRL PS
Sbjct: 163 MELAEKNGMFFIETSAKTADNINQLFEEIGKRLPRPAPS 201
>sp|P36586|YPT5_SCHPO GTP-binding protein ypt5 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ypt5 PE=1 SV=1
Length = 211
Score = 178 bits (451), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/186 (53%), Positives = 124/186 (66%), Gaps = 8/186 (4%)
Query: 2 GTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVT-IKFDIWDTAGQERYHSLAPM 60
GK+SLVLRFVK QF D++ESTIGAAF TQ L ++E T +K +IWDTAGQERY SLAPM
Sbjct: 24 AVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQERYKSLAPM 83
Query: 61 YYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDL-EEKRKVKNEE 119
YYR A A+VVYDIT S E+AK W++ELQRQ +++ L NK+DL +E+R V+ +
Sbjct: 84 YYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQERRAVEKAD 143
Query: 120 GELYAQENGLSFLETSAKSAHNVNELFYEIAKRLA---EVNPSR---QTGMKLHTESHGG 173
E YA E L F ETSAK+A NVNELF IAK+L ++N +R G+ L
Sbjct: 144 AEAYAAEANLLFFETSAKTAENVNELFTAIAKKLPLEDKLNQARGAVNRGVNLSEARPAA 203
Query: 174 GRRGFC 179
G C
Sbjct: 204 QPSGSC 209
>sp|P36017|VPS21_YEAST Vacuolar protein sorting-associated protein 21 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=VPS21 PE=1
SV=1
Length = 210
Score = 175 bits (443), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/155 (54%), Positives = 114/155 (73%), Gaps = 3/155 (1%)
Query: 2 GTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMY 61
GK+S+VLRFV F + +E TIGAAF TQ +++NE T+KF+IWDTAGQER+ SLAPMY
Sbjct: 17 AVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQERFASLAPMY 76
Query: 62 YRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEE---KRKVKNE 118
YR A AA+VVYD+T SF +A+ WV+EL Q + ++I+ LV NK+D+ + +RKV E
Sbjct: 77 YRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDMLQEGGERKVARE 136
Query: 119 EGELYAQENGLSFLETSAKSAHNVNELFYEIAKRL 153
EGE A+E GL F ETSAK+ NVN++F I +++
Sbjct: 137 EGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKI 171
>sp|Q6GQP4|RAB31_RAT Ras-related protein Rab-31 OS=Rattus norvegicus GN=Rab31 PE=1 SV=2
Length = 194
Score = 172 bits (436), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/182 (47%), Positives = 118/182 (64%), Gaps = 5/182 (2%)
Query: 2 GTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMY 61
G GK+S+V RFV+ F TIGA+F T+ + KF IWDTAGQER+HSLAPMY
Sbjct: 15 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 74
Query: 62 YRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEGE 121
YRG+AAAV+VYDIT DSF KKWV+EL+ G N++M + NK DL + R+V ++ +
Sbjct: 75 YRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 134
Query: 122 LYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNP---SRQTGMKLHTESHGGGRRGF 178
YA+ G +ETSAK+A N+ ELF I++++ ++P G+KL +S GRR
Sbjct: 135 EYAESIGALVVETSAKNAINIEELFQGISRQIPPLDPHENGNSGGIKLGNQSLQAGRR-- 192
Query: 179 CC 180
CC
Sbjct: 193 CC 194
>sp|Q921E2|RAB31_MOUSE Ras-related protein Rab-31 OS=Mus musculus GN=Rab31 PE=1 SV=1
Length = 194
Score = 169 bits (428), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 86/182 (47%), Positives = 116/182 (63%), Gaps = 5/182 (2%)
Query: 2 GTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMY 61
G GK+S+V RFV+ F TIGA+F T+ + KF IWDTAGQER+HSLAPMY
Sbjct: 15 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 74
Query: 62 YRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEGE 121
YRG+AAAV+VYDIT DSF KKWV+EL+ G N++M + NK DL + R+V ++ +
Sbjct: 75 YRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 134
Query: 122 LYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNP---SRQTGMKLHTESHGGGRRGF 178
YA+ G +ETSAK+A N+ ELF I++++ + P G+KL +S RR
Sbjct: 135 EYAESIGAIVVETSAKNAINIEELFQGISRQIPPLGPQENGNSGGIKLGNQSLQASRR-- 192
Query: 179 CC 180
CC
Sbjct: 193 CC 194
>sp|Q54RX9|RAB5B_DICDI Putative ras-related protein Rab-5B OS=Dictyostelium discoideum
GN=rab5B PE=5 SV=1
Length = 214
Score = 168 bits (425), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/156 (55%), Positives = 108/156 (69%), Gaps = 3/156 (1%)
Query: 1 MGTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPM 60
M TGKT + R V+ +F +STIGAAF + + ++ + IK +IWDTAGQERY SL PM
Sbjct: 58 MNTGKTCISSRLVRNEFGP-TDSTIGAAFLVKSMVVDNINIKLEIWDTAGQERYRSLTPM 116
Query: 61 YYRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEG 120
YYRGAAAAVVVYDIT ++FE K+WV ELQ+ +PNLI+ L NKVDL R+V+ +E
Sbjct: 117 YYRGAAAAVVVYDITKKNTFETLKRWVSELQKHASPNLILALAGNKVDL-PNREVQVDEV 175
Query: 121 ELYAQENGLS-FLETSAKSAHNVNELFYEIAKRLAE 155
Y E G + F ETSA S N+NELF EI +RL E
Sbjct: 176 NRYISELGNAIFFETSAASGQNINELFTEICRRLIE 211
>sp|Q13636|RAB31_HUMAN Ras-related protein Rab-31 OS=Homo sapiens GN=RAB31 PE=1 SV=1
Length = 194
Score = 164 bits (415), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/182 (45%), Positives = 115/182 (63%), Gaps = 5/182 (2%)
Query: 2 GTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMY 61
G GK+S+V RFV+ F TIGA+F T+ + KF IWDTAGQER+HSLAPMY
Sbjct: 15 GVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMY 74
Query: 62 YRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEGE 121
YRG+AAAV+VYDIT DSF KKWV+EL+ G N++M + NK DL + R+V ++ +
Sbjct: 75 YRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 134
Query: 122 LYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPSRQTG---MKLHTESHGGGRRGF 178
YA+ G +ETSAK+A N+ ELF I++++ ++P +K+ + RR
Sbjct: 135 EYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGTIKVEKPTMQASRR-- 192
Query: 179 CC 180
CC
Sbjct: 193 CC 194
>sp|Q9UL26|RB22A_HUMAN Ras-related protein Rab-22A OS=Homo sapiens GN=RAB22A PE=1 SV=2
Length = 194
Score = 161 bits (407), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 82/182 (45%), Positives = 114/182 (62%), Gaps = 5/182 (2%)
Query: 2 GTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMY 61
G GK+S+V RFV+ F TIGA+F T+ + KF IWDTAGQER+ +LAPMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 62 YRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEGE 121
YRG+AAA++VYDIT ++F K WV+EL++ G PN+++ + NK DL + R+V + +
Sbjct: 75 YRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAK 134
Query: 122 LYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVN---PSRQTGMKLHTESHGGGRRGF 178
YA F+ETSAK+A N+NELF EI++R+ + PS G KL + R
Sbjct: 135 DYADSIHAIFVETSAKNAININELFIEISRRIPSTDANLPSGGKGFKLRRQPSEPKRS-- 192
Query: 179 CC 180
CC
Sbjct: 193 CC 194
>sp|P36018|YPT52_YEAST GTP-binding protein YPT52 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YPT52 PE=1 SV=1
Length = 234
Score = 160 bits (405), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 89/203 (43%), Positives = 126/203 (62%), Gaps = 31/203 (15%)
Query: 4 GKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLN--------EVTIKFDIWDTAGQERYH 55
GK+S+V RFVK F + +ESTIGAAF +Q ++++ +V IKF+IWDTAGQERY
Sbjct: 15 GKSSIVHRFVKDTFDELRESTIGAAFLSQSITIHPNDGNETKDVVIKFEIWDTAGQERYK 74
Query: 56 SLAPMYYRGAAAAVVVYDITSMDSFERAKKWVQELQRQ-GNPNLIMFLVANKVDL----- 109
SLAPMYYR A AA+VVYDIT DS ++A+ WV EL+ + G+ +L+++L+ NKVDL
Sbjct: 75 SLAPMYYRNANAALVVYDITQEDSLQKARNWVDELKNKVGDDDLVIYLLGNKVDLCQETP 134
Query: 110 ------------EEKRKVK---NEEGELYAQENGLSFLETSAKSAHNVNELFYEIAKRLA 154
+E++KV+ EE + YAQE GL F E SAK+ V E+F +I ++L
Sbjct: 135 STETSPDSNEGGDEEQKVRAISTEEAKQYAQEQGLLFREVSAKTGEGVKEIFQDIGEKLY 194
Query: 155 EVNPSRQTGMKLHTESHGGGRRG 177
++ + + GGG G
Sbjct: 195 DL--KKDEILSKQNRQIGGGNNG 215
>sp|P51154|RB22A_CANFA Ras-related protein Rab-22A OS=Canis familiaris GN=RAB22A PE=1 SV=1
Length = 194
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/182 (44%), Positives = 113/182 (62%), Gaps = 5/182 (2%)
Query: 2 GTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMY 61
G GK+S+V RFV+ F TIGA+F T+ + KF IWDTAGQE + +LAPMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQEAFRALAPMY 74
Query: 62 YRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEGE 121
YRG+AAA++VYDIT ++F K WV+EL++ G PN+++ + NK DL + R+V + +
Sbjct: 75 YRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAK 134
Query: 122 LYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVN---PSRQTGMKLHTESHGGGRRGF 178
YA F+ETSAK+A N+NELF EI++R+ + PS G KL + R
Sbjct: 135 DYADSIHAIFVETSAKNAININELFIEISRRIPSADANPPSGGKGFKLRRQPSEPQRS-- 192
Query: 179 CC 180
CC
Sbjct: 193 CC 194
>sp|P35285|RB22A_MOUSE Ras-related protein Rab-22A OS=Mus musculus GN=Rab22a PE=1 SV=2
Length = 194
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/182 (45%), Positives = 115/182 (63%), Gaps = 5/182 (2%)
Query: 2 GTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMY 61
G GK+S+V RFV+ F TIGA+F T+ + KF IWDTAGQER+ +LAPMY
Sbjct: 15 GVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMY 74
Query: 62 YRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEGE 121
YRG+AAA++VYDIT ++F K WV+EL++ G P++++ + NK DL + R+V + +
Sbjct: 75 YRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTDVREVMERDAK 134
Query: 122 LYAQENGLSFLETSAKSAHNVNELFYEIAKRLA--EVNP-SRQTGMKLHTESHGGGRRGF 178
YA F+ETSAK+A N+NELF EI++R+ + NP S G KL + R
Sbjct: 135 DYADSIHAIFVETSAKNAININELFIEISRRIPSTDANPASGGKGFKLRRQPSEPKRS-- 192
Query: 179 CC 180
CC
Sbjct: 193 CC 194
>sp|Q9H0T7|RAB17_HUMAN Ras-related protein Rab-17 OS=Homo sapiens GN=RAB17 PE=1 SV=2
Length = 212
Score = 150 bits (380), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 121/185 (65%), Gaps = 9/185 (4%)
Query: 3 TGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMYY 62
GK+SL LR+VK F T+G AFFT+V+ + ++K +IWDTAGQE+YHS+ +Y+
Sbjct: 30 VGKSSLALRYVKNDFKSIL-PTVGCAFFTKVVDVGATSLKLEIWDTAGQEKYHSVCHLYF 88
Query: 63 RGAAAAVVVYDITSMDSFERAKKWVQELQRQGNP-NLIMFLVANKVDLEEKRKVKNEEGE 121
RGA AA++VYDIT DSF +A++W+++L+ + +P +++ LV NK DL ++R+V +EG+
Sbjct: 89 RGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVLVMLVGNKTDLSQEREVTFQEGK 148
Query: 122 LYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPSRQTGMKLHTES-----HGGGRR 176
+A L F+ETSAK H V+E+F +A+ L + S + G L ++ G R+
Sbjct: 149 EFADSQKLLFMETSAKLNHQVSEVFNTVAQEL--LQRSDEEGQALRGDAAVALNKGPARQ 206
Query: 177 GFCCS 181
CC+
Sbjct: 207 AKCCA 211
>sp|Q01971|RAB2A_RABIT Ras-related protein Rab-2A OS=Oryctolagus cuniculus GN=RAB2A PE=2
SV=1
Length = 212
Score = 150 bits (378), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 103/154 (66%)
Query: 2 GTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMY 61
G GK+ L+L+F +F + TIG F ++++++ IK IWDTAGQE + S+ Y
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSY 75
Query: 62 YRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEGE 121
YRGAA A++VYDIT D+F W+++ ++ N N+++ L+ NK DLE +R+VK EEGE
Sbjct: 76 YRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGE 135
Query: 122 LYAQENGLSFLETSAKSAHNVNELFYEIAKRLAE 155
+A+E+GL F+ETSAK+A NV E F AK + E
Sbjct: 136 AFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>sp|Q5R6B6|RAB2A_PONAB Ras-related protein Rab-2A OS=Pongo abelii GN=RAB2A PE=2 SV=1
Length = 212
Score = 150 bits (378), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 103/154 (66%)
Query: 2 GTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMY 61
G GK+ L+L+F +F + TIG F ++++++ IK IWDTAGQE + S+ Y
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSY 75
Query: 62 YRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEGE 121
YRGAA A++VYDIT D+F W+++ ++ N N+++ L+ NK DLE +R+VK EEGE
Sbjct: 76 YRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGE 135
Query: 122 LYAQENGLSFLETSAKSAHNVNELFYEIAKRLAE 155
+A+E+GL F+ETSAK+A NV E F AK + E
Sbjct: 136 AFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>sp|Q4R4X6|RAB2A_MACFA Ras-related protein Rab-2A OS=Macaca fascicularis GN=RAB2A PE=2
SV=1
Length = 212
Score = 150 bits (378), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 103/154 (66%)
Query: 2 GTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMY 61
G GK+ L+L+F +F + TIG F ++++++ IK IWDTAGQE + S+ Y
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSY 75
Query: 62 YRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEGE 121
YRGAA A++VYDIT D+F W+++ ++ N N+++ L+ NK DLE +R+VK EEGE
Sbjct: 76 YRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGE 135
Query: 122 LYAQENGLSFLETSAKSAHNVNELFYEIAKRLAE 155
+A+E+GL F+ETSAK+A NV E F AK + E
Sbjct: 136 AFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>sp|P61019|RAB2A_HUMAN Ras-related protein Rab-2A OS=Homo sapiens GN=RAB2A PE=1 SV=1
Length = 212
Score = 150 bits (378), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 103/154 (66%)
Query: 2 GTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMY 61
G GK+ L+L+F +F + TIG F ++++++ IK IWDTAGQE + S+ Y
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSY 75
Query: 62 YRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEGE 121
YRGAA A++VYDIT D+F W+++ ++ N N+++ L+ NK DLE +R+VK EEGE
Sbjct: 76 YRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGE 135
Query: 122 LYAQENGLSFLETSAKSAHNVNELFYEIAKRLAE 155
+A+E+GL F+ETSAK+A NV E F AK + E
Sbjct: 136 AFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>sp|P61105|RAB2A_CANFA Ras-related protein Rab-2A OS=Canis familiaris GN=RAB2A PE=1 SV=1
Length = 212
Score = 150 bits (378), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 103/154 (66%)
Query: 2 GTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMY 61
G GK+ L+L+F +F + TIG F ++++++ IK IWDTAGQE + S+ Y
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSY 75
Query: 62 YRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEGE 121
YRGAA A++VYDIT D+F W+++ ++ N N+++ L+ NK DLE +R+VK EEGE
Sbjct: 76 YRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGE 135
Query: 122 LYAQENGLSFLETSAKSAHNVNELFYEIAKRLAE 155
+A+E+GL F+ETSAK+A NV E F AK + E
Sbjct: 136 AFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>sp|P53994|RAB2A_MOUSE Ras-related protein Rab-2A OS=Mus musculus GN=Rab2a PE=1 SV=1
Length = 212
Score = 150 bits (378), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 103/154 (66%)
Query: 2 GTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMY 61
G GK+ L+L+F +F + TIG F ++++++ IK IWDTAGQE + S+ Y
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSY 75
Query: 62 YRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEGE 121
YRGAA A++VYDIT D+F W+++ ++ N N+++ L+ NK DLE +R+VK EEGE
Sbjct: 76 YRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGE 135
Query: 122 LYAQENGLSFLETSAKSAHNVNELFYEIAKRLAE 155
+A+E+GL F+ETSAK+A NV E F AK + E
Sbjct: 136 AFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>sp|Q90965|RAB2A_CHICK Ras-related protein Rab-2A OS=Gallus gallus GN=RAB2A PE=2 SV=1
Length = 212
Score = 150 bits (378), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 103/154 (66%)
Query: 2 GTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMY 61
G GK+ L+L+F +F + TIG F ++++++ IK IWDTAGQE + S+ Y
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSY 75
Query: 62 YRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEGE 121
YRGAA A++VYDIT D+F W+++ ++ N N+++ L+ NK DLE +R+VK EEGE
Sbjct: 76 YRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGE 135
Query: 122 LYAQENGLSFLETSAKSAHNVNELFYEIAKRLAE 155
+A+E+GL F+ETSAK+A NV E F AK + E
Sbjct: 136 AFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>sp|P36863|YPTV4_VOLCA GTP-binding protein yptV4 OS=Volvox carteri GN=YPTV4 PE=3 SV=1
Length = 213
Score = 149 bits (375), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/172 (43%), Positives = 109/172 (63%), Gaps = 4/172 (2%)
Query: 2 GTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMY 61
G GK+ L+L+F +F + TIG F ++++++ IK IWDTAGQE + S+ Y
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQESFRSITRSY 75
Query: 62 YRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEGE 121
YRGAA A++VYDIT ++F W+++ ++ NPN+ + L+ NK DL +R V EEGE
Sbjct: 76 YRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVTTEEGE 135
Query: 122 LYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPSRQTGM-KLHTESHG 172
+A+E+GL FLETSA++AHNV E F AK E+ Q G+ + ES+G
Sbjct: 136 QFAKEHGLIFLETSARTAHNVEEAFINTAK---EIYKKIQDGVFDVSNESYG 184
>sp|P05712|RAB2A_RAT Ras-related protein Rab-2A OS=Rattus norvegicus GN=Rab2a PE=1 SV=1
Length = 212
Score = 149 bits (375), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 103/154 (66%)
Query: 2 GTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMY 61
G GK+ L+L+F +F + T+G F ++++++ IK IWDTAGQE + S+ Y
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHDLTMGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSY 75
Query: 62 YRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEGE 121
YRGAA A++VYDIT D+F W+++ ++ N N+++ L+ NK DLE +R+VK EEGE
Sbjct: 76 YRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGE 135
Query: 122 LYAQENGLSFLETSAKSAHNVNELFYEIAKRLAE 155
+A+E+GL F+ETSAK+A NV E F AK + E
Sbjct: 136 AFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>sp|Q39570|YPTC4_CHLRE GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii GN=YPTC4
PE=3 SV=1
Length = 213
Score = 149 bits (375), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/172 (43%), Positives = 109/172 (63%), Gaps = 4/172 (2%)
Query: 2 GTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMY 61
G GK+ L+L+F +F + TIG F ++++++ IK IWDTAGQE + S+ Y
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQESFRSITRSY 75
Query: 62 YRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEGE 121
YRGAA A++VYDIT ++F W+++ ++ NPN+ + L+ NK DL +R V EEGE
Sbjct: 76 YRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVTTEEGE 135
Query: 122 LYAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPSRQTGM-KLHTESHG 172
+A+E+GL FLETSA++AHNV E F AK E+ Q G+ + ES+G
Sbjct: 136 QFAKEHGLIFLETSARTAHNVEEAFINTAK---EIYKKIQDGVFDVSNESYG 184
>sp|Q17R06|RAB21_BOVIN Ras-related protein Rab-21 OS=Bos taurus GN=RAB21 PE=2 SV=1
Length = 222
Score = 149 bits (375), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 106/175 (60%)
Query: 3 TGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMYY 62
GKTSLVLR+ + +F D +T+ A+F T+ L++ + IWDTAGQER+H+L P+YY
Sbjct: 27 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 86
Query: 63 RGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEGEL 122
R + A++VYDIT DSF++ K WV+EL++ + + +V NKVDLE++R V +E E
Sbjct: 87 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKVDLEKERHVSIQEAES 146
Query: 123 YAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPSRQTGMKLHTESHGGGRRG 177
YA+ G TSAK + ELF ++ KR+ E + + G RRG
Sbjct: 147 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGAARRG 201
>sp|Q1KME6|RAB6A_CHICK Ras-related protein Rab-6A OS=Gallus gallus GN=RAB6A PE=2 SV=3
Length = 208
Score = 148 bits (374), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 105/150 (70%)
Query: 4 GKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMYYR 63
GKTSL+ RF+ F + ++TIG F ++ + L + TI+ +WDTAGQER+ SL P Y R
Sbjct: 25 GKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYIR 84
Query: 64 GAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEGELY 123
+AAAVVVYDIT+++SF++ KW+ +++ + ++I+ LV NK DL +KR+V EEGE
Sbjct: 85 DSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERK 144
Query: 124 AQENGLSFLETSAKSAHNVNELFYEIAKRL 153
A+E + F+ETSAK+ +NV +LF +A L
Sbjct: 145 AKELNVMFIETSAKAGYNVKQLFRRVAAAL 174
>sp|Q05975|RAB2_LYMST Ras-related protein Rab-2 OS=Lymnaea stagnalis GN=RAB2 PE=2 SV=1
Length = 212
Score = 148 bits (374), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 102/152 (67%)
Query: 2 GTGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMY 61
G GK+ L+L+F +F + TIG F ++++++ IK IWDTAGQE + S+ Y
Sbjct: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSY 75
Query: 62 YRGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEGE 121
YRGAA A++VYDIT D+F W+++ ++ N N+++ L+ NK DLE +R+VK EEGE
Sbjct: 76 YRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLEARREVKKEEGE 135
Query: 122 LYAQENGLSFLETSAKSAHNVNELFYEIAKRL 153
+A+E+GL F+ETSAK+A NV E F AK +
Sbjct: 136 AFAREHGLIFMETSAKTAANVEEAFINTAKEI 167
>sp|P35292|RAB17_MOUSE Ras-related protein Rab-17 OS=Mus musculus GN=Rab17 PE=1 SV=1
Length = 214
Score = 148 bits (374), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 120/184 (65%), Gaps = 7/184 (3%)
Query: 4 GKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMYYR 63
GKTSL LR++K F + T+G AFFT+VL L ++K +IWDTAGQE+Y S+ +Y+R
Sbjct: 31 GKTSLALRYMKQDFSNVL-PTVGCAFFTKVLDLGSSSLKLEIWDTAGQEKYQSVCHLYFR 89
Query: 64 GAAAAVVVYDITSMDSFERAKKWVQELQRQGNPN-LIMFLVANKVDLEEKRKVKNEEGEL 122
GA AA++VYDIT DSF +A++W+++L+++ P +++ LV NK DL E+R+V +EG+
Sbjct: 90 GANAALLVYDITRKDSFHKAQQWLEDLEKEFQPGEVVVMLVGNKTDLGEEREVTFQEGKE 149
Query: 123 YAQENGLSFLETSAKSAHNVNELFYEIA----KRLAEVNPSR-QTGMKLHTESHGGGRRG 177
+A+ L F+ETSAK + V+E+F +A +R + SR Q G + R+
Sbjct: 150 FAESKSLLFMETSAKLNYQVSEIFNTVAQELLQRAGDTGSSRPQEGEAVALNQEPPIRQR 209
Query: 178 FCCS 181
CC+
Sbjct: 210 QCCA 213
>sp|Q8WQ53|RAB21_GEOCY Ras-related protein Rab-21 OS=Geodia cydonium GN=RAB21 PE=2 SV=1
Length = 229
Score = 147 bits (372), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 101/154 (65%)
Query: 4 GKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMYYR 63
GKTSLVLR+ + +F D E T+ A+F + L++ I+ IWDTAGQERYH+L P+YYR
Sbjct: 28 GKTSLVLRYSENKFNDKHEQTLQASFVEKRLNIGGKRIQLAIWDTAGQERYHALGPIYYR 87
Query: 64 GAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEGELY 123
+ A++VYDIT DSF +A+ W++EL+R + + +V NK+DL+ +R V ++ Y
Sbjct: 88 DSQGAIIVYDITDEDSFHKARNWIKELKRMLGDKVTLCIVGNKIDLDRQRTVSEKDALEY 147
Query: 124 AQENGLSFLETSAKSAHNVNELFYEIAKRLAEVN 157
A+ G TSAK + V ELF ++AKR+ E N
Sbjct: 148 AESVGAKHYYTSAKQSKGVAELFLDLAKRILEAN 181
>sp|P55745|RAB21_CANFA Ras-related protein Rab-21 OS=Canis familiaris GN=RAB21 PE=3 SV=3
Length = 223
Score = 147 bits (372), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 106/175 (60%)
Query: 3 TGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMYY 62
GKTSLVLR+ + +F D +T+ A+F T+ L++ + IWDTAGQER+H+L P+YY
Sbjct: 28 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 87
Query: 63 RGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEGEL 122
R + A++VYDIT DSF++ K WV+EL++ + + +V NK+DLE++R V +E E
Sbjct: 88 RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAES 147
Query: 123 YAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPSRQTGMKLHTESHGGGRRG 177
YA+ G TSAK + ELF ++ KR+ E + + G RRG
Sbjct: 148 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGAARRG 202
>sp|P35282|RAB21_MOUSE Ras-related protein Rab-21 OS=Mus musculus GN=Rab21 PE=1 SV=4
Length = 222
Score = 147 bits (372), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 106/175 (60%)
Query: 3 TGKTSLVLRFVKGQFFDFQESTIGAAFFTQVLSLNEVTIKFDIWDTAGQERYHSLAPMYY 62
GKTSLVLR+ + +F D +T+ A+F T+ L++ + IWDTAGQER+H+L P+YY
Sbjct: 28 VGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYY 87
Query: 63 RGAAAAVVVYDITSMDSFERAKKWVQELQRQGNPNLIMFLVANKVDLEEKRKVKNEEGEL 122
R + A++VYD+T DSF++ K WV+EL++ + + +V NK+DLE++R V +E E
Sbjct: 88 RDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAES 147
Query: 123 YAQENGLSFLETSAKSAHNVNELFYEIAKRLAEVNPSRQTGMKLHTESHGGGRRG 177
YA+ G TSAK + ELF ++ KR+ E + + G RRG
Sbjct: 148 YAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQAGAARRG 202
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,395,912
Number of Sequences: 539616
Number of extensions: 2429773
Number of successful extensions: 9150
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 233
Number of HSP's that attempted gapping in prelim test: 7495
Number of HSP's gapped (non-prelim): 1169
length of query: 181
length of database: 191,569,459
effective HSP length: 110
effective length of query: 71
effective length of database: 132,211,699
effective search space: 9387030629
effective search space used: 9387030629
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)