BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 030231
         (181 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q5FHC4|HTPG_EHRRG Chaperone protein HtpG OS=Ehrlichia ruminantium (strain Gardel)
           GN=htpG PE=3 SV=1
          Length = 637

 Score = 31.2 bits (69), Expect = 3.6,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 27/57 (47%)

Query: 32  GIAEPSGEPAPLGQKTKYNDGFFEKAFMTLFARKMEKFASPAKSKTETKKKRWFDFG 88
           GI + S  P  + ++T  N+   EK   +L  R + +    A+S  E   K W +FG
Sbjct: 322 GIIDSSDLPLNISRETLQNNKIIEKIKRSLVKRVLSELKKKAESNIEDYTKFWDNFG 378


>sp|Q5HBT2|HTPG_EHRRW Chaperone protein HtpG OS=Ehrlichia ruminantium (strain
           Welgevonden) GN=htpG PE=3 SV=1
          Length = 637

 Score = 31.2 bits (69), Expect = 3.7,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 27/57 (47%)

Query: 32  GIAEPSGEPAPLGQKTKYNDGFFEKAFMTLFARKMEKFASPAKSKTETKKKRWFDFG 88
           GI + S  P  + ++T  N+   EK   +L  R + +    A+S  E   K W +FG
Sbjct: 322 GIIDSSDLPLNISRETLQNNKIIEKIKRSLVKRVLSELKKKAESNIEDYTKFWDNFG 378


>sp|Q2GFY5|HTPG_EHRCR Chaperone protein HtpG OS=Ehrlichia chaffeensis (strain Arkansas)
           GN=htpG PE=3 SV=1
          Length = 637

 Score = 30.8 bits (68), Expect = 5.4,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 28/57 (49%)

Query: 32  GIAEPSGEPAPLGQKTKYNDGFFEKAFMTLFARKMEKFASPAKSKTETKKKRWFDFG 88
           GI + S  P  + ++T  N+   EK   ++  R + +    A+S  +  KK W +FG
Sbjct: 321 GIIDSSDLPLNISRETLQNNKIIEKIKQSIVNRVLSELKKKAESDIKDYKKFWENFG 377


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.320    0.135    0.407 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,799,887
Number of Sequences: 539616
Number of extensions: 2779848
Number of successful extensions: 6343
Number of sequences better than 100.0: 7
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 6337
Number of HSP's gapped (non-prelim): 7
length of query: 181
length of database: 191,569,459
effective HSP length: 110
effective length of query: 71
effective length of database: 132,211,699
effective search space: 9387030629
effective search space used: 9387030629
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)